HHsearch results for GI: 254781112 and protein with PDBid: 2h9b_A

>2h9b_A HTH-type transcriptional regulator BENM; LTTR, transcriptional activator, LYSR-type transcriptional regulator; 1.80A {Acinetobacter SP} PDB: 2h99_A 3k1m_A 3k1n_A 3k1p_A 2f7a_A* 2f6p_A 2f78_A 2f6g_A* 2f8d_A 2f97_A*
Probab=91.70  E-value=0.62  Score=24.10  Aligned_cols=154  Identities=11%  Similarity=0.080  Sum_probs=88.8

Q ss_pred             EEHHHHHHHC-CCCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC------CCC
Q ss_conf             2167899762-998555668988988643103221100003675675420023332222222221112222------111
Q gi|254781112|r   71 DLIKEVAHRL-NLKVEFFETAVSGLITGLDTNRYDVLVNVAITPERQKKYDFSIPYIAHRVLLVVRSDQQD------IRS  143 (274)
Q Consensus        71 dl~~~i~~~l-g~~~~~~~~~~~~~~~~l~~g~~D~~~~~~~t~eR~~~~~fs~p~~~~~~~~~~~~~~~~------~~~  143 (274)
                      +++..+.++. ++++++...+.....+.|.+|++|++......+++  . ....++......++++++.+.      ..+
T Consensus       107 ~~l~~~~~~~p~v~l~~~~~~~~~l~~~l~~g~~Dlai~~~~~~~~--~-~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~  183 (312)
T 2h9b_A          107 RIIHLYRQAHPNLRIELYEMGTKAQTEALKEGRIDAGFGRLKISDP--A-IKHSLLRNERLMVAVHASHPLNQMKDKGVH  183 (312)
T ss_dssp             HHHHHHHHTCTTCEEEEEECCHHHHHHHHHTTSCSEEEESSCCCCT--T-EEEEEEEEEEEEEEEETTSGGGGGTTTCBC
T ss_pred             HHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCC--C-CEEEEECCCEEEEEECCCCHHHHCCCCCCH
T ss_conf             9999999978997785313550779999976996479960688987--6-179981130599996378846653343202


Q ss_pred             CCCCCCCCEEEEC---CCHH----HHHHHCCCC---CCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCE
Q ss_conf             1123343202310---1012----233201345---42133685577775544321003665589999998458766732
Q gi|254781112|r  144 FKDLTDKTVAQIL---GTDL----SRFAKELKS---HLVFSHNFEQSLQLLLSKRTDATMIPDIPFFNFLERRPHDGNLF  213 (274)
Q Consensus       144 ~~dL~g~~V~~~~---g~~~----~~~l~~~~~---~~~~~~~~~~~~~~l~~grvD~~~~~~~~~~~~~~~~~~~~~~~  213 (274)
                      ++||.+..+....   +...    ..+..+.+.   ....+++......++.+|..= .+.+....     .........
T Consensus       184 ~~dl~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~g~gi-~ilP~~~~-----~~~~~~l~~  257 (312)
T 2h9b_A          184 LNDLIDEKILLYPSSPKPNFSTHVMNIFSDHGLEPTKINEVREVQLALGLVAAGEGI-SLVPASTQ-----SIQLFNLSY  257 (312)
T ss_dssp             GGGSTTSEEEECCCSSSSSHHHHHHHHHHTTTCCCSEEEECSSHHHHHHHHHTTSCB-EEEEGGGG-----GBCCTTEEE
T ss_pred             HHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCEE-EEECHHHH-----HHHHCCEEE
T ss_conf             556437977984287665124666666665078861465316799999999839959-99209887-----453388799


Q ss_pred             EECCCCCCCCCEEEEEECCC
Q ss_conf             62367768770799981899
Q gi|254781112|r  214 KIADRMKDNSAVAFMMRKGN  233 (274)
Q Consensus       214 ~~~~~~~~~~~~~~~~~k~~  233 (274)
                      .....+.....++++.++.+
T Consensus       258 ~pl~~~~~~~~~~l~~r~~~  277 (312)
T 2h9b_A          258 VPLLDPDAITPIYIAVRNME  277 (312)
T ss_dssp             EEBCSTTCEEEEEEEEETTC
T ss_pred             EECCCCCCEEEEEEEEECCC
T ss_conf             98579886328999997999