HHsearch results for GI: 254781112 and protein with PDBid: 2hxr_A
>2hxr_A HTH-type transcriptional regulator CYNR; CYNR transcriptional regulator LYSR structural genomics, PSI-2, protein structure initiative; 2.05A {Escherichia coli K12} PDB: 3hfu_A
Probab=96.51 E-value=0.0059 Score=36.63 Aligned_cols=188 Identities=13% Similarity=0.180 Sum_probs=109.6
Q ss_pred HHCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHC-CCCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHH
Q ss_conf 8589589996289987248704699848898852167899762-998555668988988643103221100003675675
Q gi|254781112|r 38 EDQSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRL-NLKVEFFETAVSGLITGLDTNRYDVLVNVAITPERQ 116 (274)
Q Consensus 38 ~~~~~l~v~~~~~~pP~~~~~~d~~g~~~G~~~dl~~~i~~~l-g~~~~~~~~~~~~~~~~l~~g~~D~~~~~~~t~eR~ 116 (274)
..+|+|+||+.+.+.. ++..+++....++. ++++++...+...+.+.+.+|++|+........ .
T Consensus 27 ~~~g~l~Ig~~~~~~~-------------~~l~~~l~~f~~~~P~i~l~i~~~~~~~l~~~l~~g~~D~~i~~~~~~--~ 91 (238)
T 2hxr_A 27 LTRGSLRIAVTPTFTS-------------YFIGPLMADFYARYPSITLQLQEMSQEKIEDMLCRDELDVGIAFAPVH--S 91 (238)
T ss_dssp ----CEEEEECHHHHT-------------TTHHHHHHHHHHHCTTSCEEEEECCHHHHHHHHHTTSCSEEEEESSCC--C
T ss_pred CCCEEEEEEEEHHHHH-------------HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCHHHHHCCCCC--C
T ss_conf 9842899995378999-------------999999999999889988997328879999999869830012025544--3
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCEEEE-CCCHH----HHHHHCCCC---CCEEECCHHHHHHHH
Q ss_conf 42002333222222222111222----2111112334320231-01012----233201345---421336855777755
Q gi|254781112|r 117 KKYDFSIPYIAHRVLLVVRSDQQ----DIRSFKDLTDKTVAQI-LGTDL----SRFAKELKS---HLVFSHNFEQSLQLL 184 (274)
Q Consensus 117 ~~~~fs~p~~~~~~~~~~~~~~~----~~~~~~dL~g~~V~~~-~g~~~----~~~l~~~~~---~~~~~~~~~~~~~~l 184 (274)
..+. ..++.....+++++++.+ ..-+++||++.++... .++.. +.+.++.+. ....+++......++
T Consensus 92 ~~~~-~~~l~~~~~~~~~~~~hpla~~~~i~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 170 (238)
T 2hxr_A 92 PELE-AIPLLTESLALVVAQHHPLAVHEQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELI 170 (238)
T ss_dssp TTEE-EEEEEEEEEEEEEETTSGGGGCSEECGGGGGGCEEEEECTTSHHHHHHHHHHHHTTCCCEEEEEESCHHHHHHHH
T ss_pred CCHH-HHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHH
T ss_conf 1043-333455422321320046654035879998139689848998579999999997699875212368779999999
Q ss_pred HHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECCC---HHHHHHHHHHHHHHH
Q ss_conf 4432100366558999999845876673262367768770799981899---899999999999999
Q gi|254781112|r 185 LSKRTDATMIPDIPFFNFLERRPHDGNLFKIADRMKDNSAVAFMMRKGN---NKLTRSINEILCAIH 248 (274)
Q Consensus 185 ~~grvD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~---~~L~~~in~~l~~l~ 248 (274)
.+|..=+ +.+.... .... ....+.+. ++.....+++..+++. +.....++.....+.
T Consensus 171 ~~g~gi~-~~p~~~~----~~~~-~~~~~~~~-~~~~~~~~~li~~~~~~~s~~~~~fi~~~~e~~~ 230 (238)
T 2hxr_A 171 RRTSLST-LLPAAIA----TQHD-GLKAISLA-PPLLERTAVLLRRKNSWQTAAAKAFLHMALDKCA 230 (238)
T ss_dssp HHSSCBE-EEETHHH----HHCT-TEEEEEES-SCSCEEEEEEEEETTSCCCHHHHHHHHHHHHHHC
T ss_pred HHCCEEE-EEHHHHH----HHCC-CCEEEECC-CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 9399799-7029986----0378-93399788-9986249999998959789999999999999987