HHsearch results for GI: 254781112 and protein with PDBid: 2hxr_A

>2hxr_A HTH-type transcriptional regulator CYNR; CYNR transcriptional regulator LYSR structural genomics, PSI-2, protein structure initiative; 2.05A {Escherichia coli K12} PDB: 3hfu_A
Probab=96.51  E-value=0.0059  Score=36.63  Aligned_cols=188  Identities=13%  Similarity=0.180  Sum_probs=109.6

Q ss_pred             HHCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHC-CCCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHH
Q ss_conf             8589589996289987248704699848898852167899762-998555668988988643103221100003675675
Q gi|254781112|r   38 EDQSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRL-NLKVEFFETAVSGLITGLDTNRYDVLVNVAITPERQ  116 (274)
Q Consensus        38 ~~~~~l~v~~~~~~pP~~~~~~d~~g~~~G~~~dl~~~i~~~l-g~~~~~~~~~~~~~~~~l~~g~~D~~~~~~~t~eR~  116 (274)
                      ..+|+|+||+.+.+..             ++..+++....++. ++++++...+...+.+.+.+|++|+........  .
T Consensus        27 ~~~g~l~Ig~~~~~~~-------------~~l~~~l~~f~~~~P~i~l~i~~~~~~~l~~~l~~g~~D~~i~~~~~~--~   91 (238)
T 2hxr_A           27 LTRGSLRIAVTPTFTS-------------YFIGPLMADFYARYPSITLQLQEMSQEKIEDMLCRDELDVGIAFAPVH--S   91 (238)
T ss_dssp             ----CEEEEECHHHHT-------------TTHHHHHHHHHHHCTTSCEEEEECCHHHHHHHHHTTSCSEEEEESSCC--C
T ss_pred             CCCEEEEEEEEHHHHH-------------HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCHHHHHCCCCC--C
T ss_conf             9842899995378999-------------999999999999889988997328879999999869830012025544--3


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCEEEE-CCCHH----HHHHHCCCC---CCEEECCHHHHHHHH
Q ss_conf             42002333222222222111222----2111112334320231-01012----233201345---421336855777755
Q gi|254781112|r  117 KKYDFSIPYIAHRVLLVVRSDQQ----DIRSFKDLTDKTVAQI-LGTDL----SRFAKELKS---HLVFSHNFEQSLQLL  184 (274)
Q Consensus       117 ~~~~fs~p~~~~~~~~~~~~~~~----~~~~~~dL~g~~V~~~-~g~~~----~~~l~~~~~---~~~~~~~~~~~~~~l  184 (274)
                      ..+. ..++.....+++++++.+    ..-+++||++.++... .++..    +.+.++.+.   ....+++......++
T Consensus        92 ~~~~-~~~l~~~~~~~~~~~~hpla~~~~i~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  170 (238)
T 2hxr_A           92 PELE-AIPLLTESLALVVAQHHPLAVHEQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELI  170 (238)
T ss_dssp             TTEE-EEEEEEEEEEEEEETTSGGGGCSEECGGGGGGCEEEEECTTSHHHHHHHHHHHHTTCCCEEEEEESCHHHHHHHH
T ss_pred             CCHH-HHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHH
T ss_conf             1043-333455422321320046654035879998139689848998579999999997699875212368779999999


Q ss_pred             HHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECCC---HHHHHHHHHHHHHHH
Q ss_conf             4432100366558999999845876673262367768770799981899---899999999999999
Q gi|254781112|r  185 LSKRTDATMIPDIPFFNFLERRPHDGNLFKIADRMKDNSAVAFMMRKGN---NKLTRSINEILCAIH  248 (274)
Q Consensus       185 ~~grvD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~---~~L~~~in~~l~~l~  248 (274)
                      .+|..=+ +.+....    .... ....+.+. ++.....+++..+++.   +.....++.....+.
T Consensus       171 ~~g~gi~-~~p~~~~----~~~~-~~~~~~~~-~~~~~~~~~li~~~~~~~s~~~~~fi~~~~e~~~  230 (238)
T 2hxr_A          171 RRTSLST-LLPAAIA----TQHD-GLKAISLA-PPLLERTAVLLRRKNSWQTAAAKAFLHMALDKCA  230 (238)
T ss_dssp             HHSSCBE-EEETHHH----HHCT-TEEEEEES-SCSCEEEEEEEEETTSCCCHHHHHHHHHHHHHHC
T ss_pred             HHCCEEE-EEHHHHH----HHCC-CCEEEECC-CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf             9399799-7029986----0378-93399788-9986249999998959789999999999999987