HHsearch results for GI: 254781112 and protein with PDBid: 2i49_A
>2i49_A Bicarbonate transporter; alpha-beta protein, C-clamp, ABC transporter, periplasmic solute-binding protein, bicarbonate-binding protein; 1.35A {Synechocystis SP} PDB: 2i48_A 2i4b_A 2i4c_A
Probab=96.55 E-value=0.0047 Score=37.22 Aligned_cols=211 Identities=11% Similarity=0.085 Sum_probs=105.4
Q ss_pred HCCCEEEEECC--CCCCEEEEEECCCCCEEEEEEEEHHHHHHHCCCC-CCCCC-CCHHHHHHHHHCCC----CCCCH---
Q ss_conf 58958999628--9987248704699848898852167899762998-55566-89889886431032----21100---
Q gi|254781112|r 39 DQSALRVGTDG--IYPPHSFHAQDGRGELTGFDIDLIKEVAHRLNLK-VEFFE-TAVSGLITGLDTNR----YDVLV--- 107 (274)
Q Consensus 39 ~~~~l~v~~~~--~~pP~~~~~~d~~g~~~G~~~dl~~~i~~~lg~~-~~~~~-~~~~~~~~~l~~g~----~D~~~--- 107 (274)
++.+|+||.-+ +..|+. + -.-+-++++.|++ ++++. ..|....+.|..|. +|+..
T Consensus 34 Ek~~l~iG~iP~~d~aPl~-V-------------A~ekGfF~~~GLd~V~l~~~~s~a~~~d~l~~G~~dg~lD~a~~la 99 (429)
T 2i49_A 34 ETANIKLGYIPIVEAAPLI-I-------------AQEKGFFAKYGMTGVEVSKQANWASARDNVTIGSQGGGIDGGQWQM 99 (429)
T ss_dssp SCSEEEEEECSSGGGHHHH-H-------------HHHTTHHHHTTCCEEEEEECSSHHHHHHHHHHTGGGTSCSEEEECT
T ss_pred CCCEEEEEEEECHHHHHHH-H-------------HHHCCHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCEEECCC
T ss_conf 7746999987744369999-9-------------9977948875997588995587799999998142257621564154
Q ss_pred HCCC--CH---HHHHHHCCCC--CCCCCCCCCC-------------CCCCCCCCCCCCCCCCCCEEE--E-CCCHHHH--
Q ss_conf 0036--75---6754200233--3222222222-------------111222211111233432023--1-0101223--
Q gi|254781112|r 108 NVAI--TP---ERQKKYDFSI--PYIAHRVLLV-------------VRSDQQDIRSFKDLTDKTVAQ--I-LGTDLSR-- 162 (274)
Q Consensus 108 ~~~~--t~---eR~~~~~fs~--p~~~~~~~~~-------------~~~~~~~~~~~~dL~g~~V~~--~-~g~~~~~-- 162 (274)
++.. +. .+........ ........+. .......++++.|++|+++++ . .++....
T Consensus 100 p~p~a~~~gl~~~~~~~p~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~i~~~~dl~Gk~~~i~~~~~~s~~~~~l 179 (429)
T 2i49_A 100 PMPHLITEGIITNGNKVPMYVLAQLITQGNGIAVAPMHEGKGVNLDITKAADYIKGFNKTNGRKFKAAHTFPNVNQDFWI 179 (429)
T ss_dssp THHHHHHTTTTTTTCCCCEEEEEECCBCCEEEEECGGGTTTTCSSCCGGGHHHHHTHHHHHSSCCEEEESSTTSHHHHHH
T ss_pred CCHHHHHHHHHHCCCCCCEEEEHHHHCCCCEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCHHHHHH
T ss_conf 30899887776237788957633230588617851212025744212450565531887259861026789985899999
Q ss_pred --HHHCCCCC----C-EEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCC-CCEEEEEEC---
Q ss_conf --32013454----2-133685577775544321003665589999998458766732623677687-707999818---
Q gi|254781112|r 163 --FAKELKSH----L-VFSHNFEQSLQLLLSKRTDATMIPDIPFFNFLERRPHDGNLFKIADRMKDN-SAVAFMMRK--- 231 (274)
Q Consensus 163 --~l~~~~~~----~-~~~~~~~~~~~~l~~grvD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~k--- 231 (274)
++++.+.+ + +..-.+.+....|.+|++|+++....-..... ..... ............ ....+++++
T Consensus 180 ~~~L~~~Gldp~~DV~iv~~~p~~~~~aL~~G~IDa~~v~eP~~~~a~-~~g~g-~~~~~~~di~~~~~~~vl~~~~~~~ 257 (429)
T 2i49_A 180 RYWFAAGGVDPDTDIDLLAVPPAETVQGMRNGTMDAFSTGDPWPYRIV-TENIG-YMAGLTAQIWPYHPEEYLAIRADWV 257 (429)
T ss_dssp HHHHHHTTCCTTTTSEEEECCHHHHHHHHHHTCCCEEEEETTHHHHHH-HTTSC-EEEEEHHHHSTTCCCCEEEEEHHHH
T ss_pred HHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCCCEEEECCHHHHHHH-HCCCC-EEEECHHHHCCCCCCEEEEECHHHH
T ss_conf 999996699876406987467889999996598457971644999999-61887-3651167746898652799639999
Q ss_pred -CCHHHHHHHHHHHHHHH---HC----CHHHHHHH--HHCCCCC
Q ss_conf -99899999999999999---79----85999998--7678887
Q gi|254781112|r 232 -GNNKLTRSINEILCAIH---LD----GTYKKIFD--RYFDKNI 265 (274)
Q Consensus 232 -~~~~L~~~in~~l~~l~---~~----G~~~~I~~--kw~g~d~ 265 (274)
+||+....+-+++.+-. ++ -+..+|.. .|++.+.
T Consensus 258 ~~nPe~v~a~l~Al~~A~~w~~~~~n~~e~a~ila~~~yl~~p~ 301 (429)
T 2i49_A 258 DKNPKATKALLKGIMEAQQWIDDPKNRPEVVQIVSGRNYFNVPT 301 (429)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHTSGGGHHHHHHHHHSTTTTCSCT
T ss_pred HHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCH
T ss_conf 76879999999999999999846889999999864635589599