HHsearch results for GI: 254781112 and protein with PDBid: 2iee_A
>2iee_A ORF2, probable ABC transporter extracellular-binding protein YCKB; SR574, NESG, X-RAY, structural genomics, PSI-2; 2.20A {Bacillus subtilis}
Probab=100.00 E-value=1.3e-41 Score=275.72 Aligned_cols=231 Identities=28% Similarity=0.407 Sum_probs=201.3
Q ss_pred HHHHHHCCCEEEEECCCCCCEEEEEECC-CCCEEEEEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCH-HCCC
Q ss_conf 8878858958999628998724870469-9848898852167899762998555668988988643103221100-0036
Q gi|254781112|r 34 PFRTEDQSALRVGTDGIYPPHSFHAQDG-RGELTGFDIDLIKEVAHRLNLKVEFFETAVSGLITGLDTNRYDVLV-NVAI 111 (274)
Q Consensus 34 ~~~~~~~~~l~v~~~~~~pP~~~~~~d~-~g~~~G~~~dl~~~i~~~lg~~~~~~~~~~~~~~~~l~~g~~D~~~-~~~~ 111 (274)
-.+++++++|+||++++||||+|.+.++ .|+++||++|+++++++++|++++|+++||.+++..|++|++|+++ ++++
T Consensus 14 ~~~i~~~~~l~V~~~~~~~P~~~~~~~~~~g~~~G~~vDl~~~ia~~lg~~~~~~~~~~~~~~~~l~~g~~D~~~~~~~~ 93 (271)
T 2iee_A 14 WEQIKDKGKIVVATSGTLYPTSYHDTDSGSDKLTGYEVEVVREAAKRLGLKVEFKEMGIDGMLTAVNSGQVDAAANDIDV 93 (271)
T ss_dssp HHHHHHHTEEEEEECSCBTTTBEEETTTTCCEEECHHHHHHHHHHHHTTCEEEEEECCSTTHHHHHHHTSSSEECSSCBC
T ss_pred HHHHHCCCEEEEEECCCCCCCEEECCCCCCCCEEEEHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEECCCCC
T ss_conf 99984499799998899889678836899996788799999999998399648998999999999976997744024546
Q ss_pred CHHHHHHHCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCEEEECCCHHHHHHHCCC--CCCEEECCHHHHHHHHHHHH
Q ss_conf 756754200233322222222211122-221111123343202310101223320134--54213368557777554432
Q gi|254781112|r 112 TPERQKKYDFSIPYIAHRVLLVVRSDQ-QDIRSFKDLTDKTVAQILGTDLSRFAKELK--SHLVFSHNFEQSLQLLLSKR 188 (274)
Q Consensus 112 t~eR~~~~~fs~p~~~~~~~~~~~~~~-~~~~~~~dL~g~~V~~~~g~~~~~~l~~~~--~~~~~~~~~~~~~~~l~~gr 188 (274)
+++|.+.+.||.||+.....++++++. ..+.+++||+|++||+..|+.+.+++++.. ..+..+.+..+++++|.+||
T Consensus 94 ~~~r~~~~~~s~p~~~~~~~~~~~~~~~~~~~~~~dl~g~~v~v~~g~~~~~~l~~~~~~~~i~~~~s~~~~l~~L~~gr 173 (271)
T 2iee_A 94 TKDREEKFAFSTPYKYSYGTAIVRKDDLSGIKTLKDLKGKKAAGAATTVYMEVARKYGAKEVIYDNATNEQYLKDVANGR 173 (271)
T ss_dssp CHHHHTTEEECCCSEEEEEEEEECTTTGGGCSSGGGGTTCEEESCTTSHHHHHHHHTTCEEEECSSCCHHHHHHHHHHTS
T ss_pred CHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHCCCEEEECCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCC
T ss_conf 87887654205662215762367504777779878807945897168589999997089858998236088999997695
Q ss_pred HHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC-C
Q ss_conf 1003665589999998458766732623677687707999818998999999999999997985999998767888-7
Q gi|254781112|r 189 TDATMIPDIPFFNFLERRPHDGNLFKIADRMKDNSAVAFMMRKGNNKLTRSINEILCAIHLDGTYKKIFDRYFDKN-I 265 (274)
Q Consensus 189 vD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~L~~~in~~l~~l~~~G~~~~I~~kw~g~d-~ 265 (274)
+|+++.+.....+++.+.+.... .........+.+++++++|++++|++.||++|.+|++||++++|.+||||+. |
T Consensus 174 vD~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~k~~~~L~~~ln~~l~~i~~dG~~~~I~~kyf~~~d~ 250 (271)
T 2iee_A 174 TDVILNDYYLQTLALAAFPDLNI-TIHPDIKYMPNKQALVMKKSNAALQKKMNEALKEMSKDGSLTKLSKQFFNKADV 250 (271)
T ss_dssp SCEEEEEHHHHHHHHHHCTTSSC-EECSSCCEEEEEECCEEETTCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTTCCT
T ss_pred EEEEEECHHHHHHHHHHCCCCCE-EECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC
T ss_conf 34999249999999986899746-866676656612899994899999999999999999787799999874899755