HHsearch results for GI: 254781112 and protein with PDBid: 3hn0_A
>3hn0_A Nitrate transport protein; YP_001302749.1, structural genomics, joint center for structural genomics, JCSG; 1.75A {Parabacteroides distasonis}
Probab=97.88 E-value=3.2e-05 Score=50.63 Aligned_cols=201 Identities=7% Similarity=-0.026 Sum_probs=104.2
Q ss_pred HCCCEEEEECCCCCC---EEEEEECCCCCEEEEEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCH-HCCCCH-
Q ss_conf 589589996289987---248704699848898852167899762998555668988988643103221100-003675-
Q gi|254781112|r 39 DQSALRVGTDGIYPP---HSFHAQDGRGELTGFDIDLIKEVAHRLNLKVEFFETAVSGLITGLDTNRYDVLV-NVAITP- 113 (274)
Q Consensus 39 ~~~~l~v~~~~~~pP---~~~~~~d~~g~~~G~~~dl~~~i~~~lg~~~~~~~~~~~~~~~~l~~g~~D~~~-~~~~t~- 113 (274)
+..+||||+-.+ || +.... +.+|.. +..++++++. .+.+.+...|.+|++|+.. +.....
T Consensus 3 ~~~~irv~~~~~-p~~~~~~~~~-~~~~~~------------~~~~~~v~~~-~s~~~~~~~l~~G~~D~~~~~~~~~~~ 67 (283)
T 3hn0_A 3 EDTVIKVSVLRG-PSVIAFADWL-ENPPII------------DNKKVQVKVV-DSPDLAQALLIKQETDIAVLPMINAAN 67 (283)
T ss_dssp -CCEEEEEEESS-THHHHTHHHH-HSCCEE------------TTEEEEEEEE-SCHHHHHHHHHTTCCSEEEEEHHHHHH
T ss_pred CCCEEEEEECCC-CHHHHHHHHH-HHCCCC------------CCCCEEEEEE-CCHHHHHHHHHCCCCCEEEECHHHHHH
T ss_conf 886599992589-6189999999-844745------------7898689995-799999999977999899736899999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE-CCCHHH----HHHHCCCCC---CEEECCHHHHHHHHH
Q ss_conf 675420023332222222221112222111112334320231-010122----332013454---213368557777554
Q gi|254781112|r 114 ERQKKYDFSIPYIAHRVLLVVRSDQQDIRSFKDLTDKTVAQI-LGTDLS----RFAKELKSH---LVFSHNFEQSLQLLL 185 (274)
Q Consensus 114 eR~~~~~fs~p~~~~~~~~~~~~~~~~~~~~~dL~g~~V~~~-~g~~~~----~~l~~~~~~---~~~~~~~~~~~~~l~ 185 (274)
-+.+. .|+... ..... +...+.+.+||+|++|++. .|+..+ .++++.+.+ .+.+.+..+...+|.
T Consensus 68 ~~~~G----~~i~ii--a~~~~-g~~~ivs~~DLkGk~i~~~~~gs~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~al~ 140 (283)
T 3hn0_A 68 LYNKG----IKIKLA--GCPIW-GTLYLVEKTPLKEPALYVFGNGTTPDILTRYYLGRQRLDYPLNYAFNTAGEITQGIL 140 (283)
T ss_dssp HHHTT----CSCEEE--EEEEC-CCCEEEECSSCCSCCEECSSTTSHHHHHHHHHHHHHTCCCCEECSCCSHHHHHHHHH
T ss_pred HHHCC----CCEEEE--EEECC-CCCEEEEHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH
T ss_conf 99689----974899--98415-863486378749899999389978999999999977998440367438288899986
Q ss_pred HHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCC----CEEEEEECCCH----HHHHHHHHHHHHHHHCC-HHHHH
Q ss_conf 43210036655899999984587667326236776877----07999818998----99999999999999798-59999
Q gi|254781112|r 186 SKRTDATMIPDIPFFNFLERRPHDGNLFKIADRMKDNS----AVAFMMRKGNN----KLTRSINEILCAIHLDG-TYKKI 256 (274)
Q Consensus 186 ~grvD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~k~~~----~L~~~in~~l~~l~~~G-~~~~I 256 (274)
+|++|+++...........+.................. .....+.+.++ .+++.+.++.+-+.++. +..++
T Consensus 141 ~g~vDaa~~~eP~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~a~~~a~~~~~~~peea~~~ 220 (283)
T 3hn0_A 141 AGKVNRAVLGEPFLSIALRKDSSLRITADLNHLTDNDTLGFAQTAVVYTPTMEKYRIAFEDALRASCQKAVRYPKETIHS 220 (283)
T ss_dssp HTSCSEEEECTTHHHHHHHHCTTCEEEEECCCSSTTCSSCCCCEEEEECGGGGGGHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred CCCCCEEEECCHHHHHHHHCCCCEEEEEECHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_conf 79977898443689999971798299974046326777652001798875367889999999999999998699999999
Q ss_pred HHHHC
Q ss_conf 98767
Q gi|254781112|r 257 FDRYF 261 (274)
Q Consensus 257 ~~kw~ 261 (274)
+.|++
T Consensus 221 ~~~~~ 225 (283)
T 3hn0_A 221 LEEHG 225 (283)
T ss_dssp HHHTT
T ss_pred HHHHC
T ss_conf 99864