HHsearch results for GI: 254781112 and protein with PDBid: 3ksx_A
>3ksx_A Nitrate transport protein; SSUA, alkanesulfonate-binding protein, periplasmic-binding P transport protein; HET: MPO; 1.70A {Xanthomonas axonopodis PV} PDB: 3e4r_A* 3ksj_A*
Probab=99.02 E-value=2.5e-09 Score=76.02 Aligned_cols=211 Identities=14% Similarity=0.099 Sum_probs=120.2
Q ss_pred CHHHHHHCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEHH--HHHHHC--CCCCCCCC-CCHHHHHHHHHCCCCCCCH
Q ss_conf 788788589589996289987248704699848898852167--899762--99855566-8988988643103221100
Q gi|254781112|r 33 YPFRTEDQSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIK--EVAHRL--NLKVEFFE-TAVSGLITGLDTNRYDVLV 107 (274)
Q Consensus 33 ~~~~~~~~~~l~v~~~~~~pP~~~~~~d~~g~~~G~~~dl~~--~i~~~l--g~~~~~~~-~~~~~~~~~l~~g~~D~~~ 107 (274)
.++.+++..+||||..+.+.|+. +++ .++++. |++++|+. ..+..+..+|.+|++|+..
T Consensus 21 ~~a~a~~~~~lrIg~~~~~~~~~----------------va~~~G~f~~~~~~~~v~~~~~~~g~~~~~al~sG~~D~~~ 84 (324)
T 3ksx_A 21 QPALAAEPAQLRIGYQKAVSSLV----------------LAKQHRLLEQRFPRTKITWVEFPAGPQLLEALNVGSIDLGG 84 (324)
T ss_dssp ----CCCCSEEEEEEETTCHHHH----------------HHHHHTHHHHHCTTSEEEEEEESSHHHHHHHHHTTSCSEEE
T ss_pred CCCCCCCCCEEEEEEECCCCHHH----------------HHHHHCHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCEEE
T ss_conf 86555899759999616865799----------------99984869783899827999789779999999849928896
Q ss_pred HCC--CCHHHHHHHCC--CCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHH----HHHCCCC-----CCE
Q ss_conf 003--67567542002--333222--22222211122221111123343202310101223----3201345-----421
Q gi|254781112|r 108 NVA--ITPERQKKYDF--SIPYIA--HRVLLVVRSDQQDIRSFKDLTDKTVAQILGTDLSR----FAKELKS-----HLV 172 (274)
Q Consensus 108 ~~~--~t~eR~~~~~f--s~p~~~--~~~~~~~~~~~~~~~~~~dL~g~~V~~~~g~~~~~----~l~~~~~-----~~~ 172 (274)
... ..-.|.+...+ -..+.. ....+++++++ .+++++||+||+||+..|+..+. ++++.+. +++
T Consensus 85 ~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~iv~~~~s-~i~s~~DLkGK~v~v~~gs~~~~~l~~~L~~~Gl~~~dV~~v 163 (324)
T 3ksx_A 85 AGDIPPLFAQAAGADLLYVGWVPPTPKAETILVPSKS-ALRTVADLKGKRIAFQKGSSAHNLLLRVLAKSGLSMRDITPL 163 (324)
T ss_dssp EESHHHHHHHHTTCCEEEEEEECCCGGGEEEEEETTC-SCCSGGGGTTCEEEECTTSHHHHHHHHHHHHTTCCGGGSEEE
T ss_pred ECHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCC-CCCCHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEE
T ss_conf 4659999999879985999989637984289980899-999978938998987568730679999999879973235401
Q ss_pred EECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEEC----CCHHH----HHHHHHHH
Q ss_conf 33685577775544321003665589999998458766732623677687707999818----99899----99999999
Q gi|254781112|r 173 FSHNFEQSLQLLLSKRTDATMIPDIPFFNFLERRPHDGNLFKIADRMKDNSAVAFMMRK----GNNKL----TRSINEIL 244 (274)
Q Consensus 173 ~~~~~~~~~~~l~~grvD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k----~~~~L----~~~in~~l 244 (274)
.. ++.+...+|.+|++|+++......... ...+... .+...... ......+..++ +++++ ...+.++.
T Consensus 164 ~~-~~~~~~~al~~G~vDa~~~~~p~~~~~-~~~g~~~-~l~~~~~~-~~~~~~~~~~~~~~~~~p~~v~~fl~a~~~a~ 239 (324)
T 3ksx_A 164 YL-SPANARAAFAAGQVDAWAIWDPWYSAL-TLDGSAR-LLANGEGL-GLTGGFFLSSRRYATAWGPFVQQVMGTLNQAD 239 (324)
T ss_dssp EC-CHHHHHHHHHTTCCSEEEEETTHHHHH-HHTTSEE-EEEESTTS-CCCCEEEEEEHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EC-CHHHHHHHHHCCCCCEEEECCHHHHHH-HHCCCCE-EEECCCCC-CCCCCEEEECHHHHHHCHHHHHHHHHHHHHHH
T ss_conf 25-826666665313500999815799999-9749948-99714446-87664389858888679899999999999999
Q ss_pred HHHHHCC-HHHHHHHHHCCCC
Q ss_conf 9999798-5999998767888
Q gi|254781112|r 245 CAIHLDG-TYKKIFDRYFDKN 264 (274)
Q Consensus 245 ~~l~~~G-~~~~I~~kw~g~d 264 (274)
.-+.++. +..+++.+|.|.+
T Consensus 240 ~~~~~n~~~a~~~~a~~~~~~ 260 (324)
T 3ksx_A 240 GLLERDRAGSIKTLAQVSGLP 260 (324)
T ss_dssp HHHHHTHHHHHHHHHHHHCCC
T ss_pred HHHHHCHHHHHHHHHHHHCCC
T ss_conf 999979999999999998909