HHsearch results for GI: 254781112 and protein with PDBid: 3n5l_A
>3n5l_A Binding protein component of ABC phosphonate TRAN; structural genomics, joint center for structural genomics; HET: UNL; 1.97A {Pseudomonas aeruginosa}
Probab=99.26 E-value=8.8e-12 Score=91.20 Aligned_cols=210 Identities=14% Similarity=0.202 Sum_probs=138.3
Q ss_pred HCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHCCCCCCCCCC-CHHHHHHHHHCCCCCCCH--HCCCCH--
Q ss_conf 589589996289987248704699848898852167899762998555668-988988643103221100--003675--
Q gi|254781112|r 39 DQSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRLNLKVEFFET-AVSGLITGLDTNRYDVLV--NVAITP-- 113 (274)
Q Consensus 39 ~~~~l~v~~~~~~pP~~~~~~d~~g~~~G~~~dl~~~i~~~lg~~~~~~~~-~~~~~~~~l~~g~~D~~~--~~~~t~-- 113 (274)
+.++|++|+-+...|-.. ...--.+++.+.+.+|++++++.. ++..+++++.+|++|+++ +.++-.
T Consensus 2 d~~~l~fg~~p~~~~~~~---------~~~~~pl~~~L~~~lG~~V~~~~~~dy~~~ieal~~g~vDia~~~~~~~~~a~ 72 (310)
T 3n5l_A 2 DQPVINFGIISTESSQNL---------KSIWEPFLKDMSQQTGYQVKAFFAPDYAGIIQGMRFDKVDIAWYGNKAAMEAV 72 (310)
T ss_dssp CCCEEEEEECCSSCHHHH---------HHHHHHHHHHHHHHHSSEEEEECCSSHHHHHHHHHTTSCSEEECCHHHHHHHH
T ss_pred CCCEEEEEECCCCCHHHH---------HHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCEEEECCHHHHHHH
T ss_conf 998699997789999999---------99999999999997699579997599999999997699868998928999998
Q ss_pred HHHHHHCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCC----CCCEEEEC-----CCHHH-HHH-HCCC------CCC
Q ss_conf 675420023332-----22222222111222211111233----43202310-----10122-332-0134------542
Q gi|254781112|r 114 ERQKKYDFSIPY-----IAHRVLLVVRSDQQDIRSFKDLT----DKTVAQIL-----GTDLS-RFA-KELK------SHL 171 (274)
Q Consensus 114 eR~~~~~fs~p~-----~~~~~~~~~~~~~~~~~~~~dL~----g~~V~~~~-----g~~~~-~~l-~~~~------~~~ 171 (274)
+|....-|..+. ......+++|+|+ .+++++||. |++++... |+... .++ .+.+ .+.
T Consensus 73 ~~~~~~~~~~~~~~~g~~~y~s~liv~~ds-~i~sl~DL~gk~kg~~~a~~d~~Stsg~l~p~~~l~~~~gi~~~~~f~~ 151 (310)
T 3n5l_A 73 DRAHGEIFAQTVAASGAPGYWSLLIANKDS-KIDSLEDMLANAKSLTFGNGDPNSTSGYLVPGYYVFAKNNVDPVKAFKR 151 (310)
T ss_dssp HHSCEEEEEEEEETTCCSEEEEEEEEETTC-SCCSHHHHHHTGGGCEEEECCTTCTTTTHHHHHHTTTTTTCCHHHHSSE
T ss_pred HCCCCEEEEEEECCCCCCCCEEEEEEECCC-CCCCHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEE
T ss_conf 605980566520347887610899996887-7665777741000000024787632788999999998649984004234
Q ss_pred EEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECC--CCCCCCCEEEEEECC-CHHHHHHHHHHHHHHH
Q ss_conf 1336855777755443210036655899999984587667326236--776877079998189-9899999999999999
Q gi|254781112|r 172 VFSHNFEQSLQLLLSKRTDATMIPDIPFFNFLERRPHDGNLFKIAD--RMKDNSAVAFMMRKG-NNKLTRSINEILCAIH 248 (274)
Q Consensus 172 ~~~~~~~~~~~~l~~grvD~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~k~-~~~L~~~in~~l~~l~ 248 (274)
+.+.+++..+.+|.+|++|+++.+......+....+.....+++.. ++... ..++++++ ++++++.|.++|-.+.
T Consensus 152 v~~~sh~~~~~aV~~G~vDaa~~~~~~~~~~~~~~~~~~~~lrvI~~S~~iP~--~~i~~~~~l~~e~~~~i~~all~~~ 229 (310)
T 3n5l_A 152 TLNSSHEVNALAVANKQVDVATFNTEGMERLELTQPEKARQLKVIWKSPLIPG--DPLVWRNNLSDEQKNKLRDFFFKYG 229 (310)
T ss_dssp EEECCHHHHHHHHHTTSSSEEEEEHHHHHHHHHHCHHHHTTEEEEEEEEEEEC--CEEEEETTSCHHHHHHHHHHHHHCC
T ss_pred EECCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHCHHHHHCCEEEEECCCCCC--CEEEEECCCCHHHHHHHHHHHHHCC
T ss_conf 76078388999998699878985179999999847044516269986799888--7389929899999999999998468
Q ss_pred HCCHHHHHHHHH
Q ss_conf 798599999876
Q gi|254781112|r 249 LDGTYKKIFDRY 260 (274)
Q Consensus 249 ~~G~~~~I~~kw 260 (274)
.+++..++.+.+
T Consensus 230 ~~~e~~~iL~~~ 241 (310)
T 3n5l_A 230 ANAEQKKVLADL 241 (310)
T ss_dssp CSHHHHHHHHHT
T ss_pred CCHHHHHHHHHC
T ss_conf 997789999857