BLAST/PSIBLAST alignment of GI: 254781112 and GI: 13473306 at iteration 1
>gi|13473306|ref|NP_104873.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Mesorhizobium loti MAFF303099] Length = 267
>gi|14024054|dbj|BAB50659.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Mesorhizobium loti MAFF303099] Length = 267
 Score =  192 bits (489), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 105/269 (39%), Positives = 158/269 (58%), Gaps = 8/269 (2%)

Query: 1   MRRLLRDLRKIFFSKYLFFAP---FFILFSYYFVIYPFRTEDQSALRVGTDGIYPPHSFH 57
           M    RD +K+ + K L  A       + S +      + +    ++VGT+G Y P ++H
Sbjct: 1   MSGQGRDHKKMKWLKSLIVAGTLQALAVTSGHAGANLDQIKQAGVIKVGTEGTYAPFTYH 60

Query: 58  AQDGRGELTGFDIDLIKEVAHRLNLKVEFFETAVSGLITGLDTNRYDVLVN-VAITPERQ 116
             D  G L GFD+++ K +A +L +KVEF E    GLI GLD  RYD ++N V IT  R+
Sbjct: 61  --DASGALVGFDVEIAKAIADKLGVKVEFLEGKWDGLIAGLDVKRYDAVINEVGITDARK 118

Query: 117 KKYDFSIPYIAHRVLLVVRSDQQDIRSFKDLTDKTVAQILGTDLSRFAKELKSHLVFSHN 176
            KYDFS PYIA + +L+VR D  DI++F DL  K  AQ L ++  + A+   + LV +  
Sbjct: 119 AKYDFSDPYIASKAVLIVRGDNTDIKTFADLKGKKSAQSLTSNFGKLAEASGAELVGTDG 178

Query: 177 FEQSLQLLLSKRTDATMIPDIPFFNFLERRPHDGNLFKIADRMKDNSAVAFMMRKGNNKL 236
           F+QS+QLLL+ R DAT+   + F +F + +P D N+ KIA + ++      ++RKG+ +L
Sbjct: 179 FDQSIQLLLTGRADATINDSLSFLDFKKHKP-DANV-KIAAQEENADYSGVIVRKGDAEL 236

Query: 237 TRSINEILCAIHLDGTYKKIFDRYFDKNI 265
             +IN+ L  I  DGTYKKI D YF +++
Sbjct: 237 VAAINKALADIKADGTYKKIADTYFGQDV 265