PSIBLAST alignment of GI: 254781112 and protein with PDB id: 2ia4
>gi|159794821|pdb|2IA4|A Chain A, Crystal Structure Of Novel Amino Acid Binding Protein From Shigella Flexneri Length = 279
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/254 (15%), Positives = 81/254 (31%), Gaps = 16/254 (6%)
Query: 27 SYYFVIYPFRTEDQSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRLN----- 81
+ + + VG P S++ D + ++ G+ D + +
Sbjct: 1 APAAGSTLDKIAKNGVIVVGHRESSVPFSYY--DNQQKVVGYSQDYSNAIVEAVKKKLNK 58
Query: 82 --LKVEFFETAVSGLITGLDTNRYDVLVNVAITPERQKKYDFSIPYIAHRVLLVVRSDQQ 139
L+V+ I L +D ++K I ++
Sbjct: 59 PDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAFSDTIFVVGTRLLTKKGG 118
Query: 140 DIRSFKDLTDKTVAQILGTDLS------RFAKELKSHLVFSHNFEQSLQLLLSKRTDATM 193
DI+ F DL K V GT ++ ++ + + S + L S R A
Sbjct: 119 DIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKXNXRIISAKDHGDSFRTLESGRAVAFX 178
Query: 194 IPDIPFFNFLERRPHDGNLFKIADRMKDNSAVAFMMRKGNNKLTRSINEILCAIHLDGTY 253
D + N + I + + A +RK + + + ++ + + G
Sbjct: 179 XDDALLAGERAKAKKPDN-WDIVGKPQSQEAYGCXLRKDDPQFKKLXDDTIAQVQTSGEA 237
Query: 254 KKIFDRYFDKNIIS 267
+K FD++F I
Sbjct: 238 EKWFDKWFKNPIPP 251