RPSBLAST alignment of GI: 254781112 and protein with PDBid: 2v3u
>2v3u_A Glutamate receptor delta-2 subunit; postsynaptic membrane, ionotropic glutamate receptors, transmembrane, membrane protein; 1.74A {Rattus norvegicus} PDB: 2v3t_A Length = 265
Score = 88.6 bits (218), Expect = 1e-18
Identities = 37/260 (14%), Positives = 93/260 (35%), Gaps = 42/260 (16%)
Query: 43 LRVGTDGIYPPHSFHAQD---GRGELTGFDIDLIKEVAHRLNLKVEFFETA--------- 90
LRV T + P +++ + GF ID++ +++ L E +
Sbjct: 5 LRVVTV-LEEPFVMVSENVLGKPKKYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQE 63
Query: 91 ---VSGLITGLDTNRYDVLVN-VAITPERQKKYDFSIPYIAHRVLLVVRSDQQDIRSFKD 146
+GL+ L R D+ ++ + ITP+R+ DF+ Y+ + + V+ I+S +D
Sbjct: 64 DGTWNGLVGELVFKRADIGISALTITPDRENVVDFTTRYMDYS-VGVLLRRGTSIQSLQD 122
Query: 147 LTDKTVAQILGTDLSRFAKELK----SHLVFSHNFEQSLQLLLSKRTDATM--------- 193
L+ +T S + ++ + + Q +++
Sbjct: 123 LSKQTDIPYGTVLDSAVYQHVRMKGLNPFERDSMYSQMWRMINRSNGSENNVLESQAGIQ 182
Query: 194 ---------IPDIPFFNFLERRPHDGNLFKIADRMKDNSAVAFMMRKGNNKLTRSINEIL 244
+ D ++ D + + + + + + ++ G + ++ +
Sbjct: 183 KVKYGNYAFVWDAAVLEYVAINDPDCSFYTVGNTV-ADRGYGIALQHG-SPYRDVFSQRI 240
Query: 245 CAIHLDGTYKKIFDRYFDKN 264
+ G + +++ KN
Sbjct: 241 LELQQSGDMDILKHKWWPKN 260