RPSBLAST alignment of GI: 254781112 and protein with PDBid: 2vha

>2vha_A Periplasmic binding transport protein; periplasmic binding protein, ligand binding, ultrahigh resolution; HET: GLU; 1.0A {Shigella flexneri} PDB: 2ia4_A* Length = 287

 Score = 95.9 bits (237), Expect = 8e-21
 Identities = 41/236 (17%), Positives = 78/236 (33%), Gaps = 16/236 (6%)

Query: 43  LRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRL-------NLKVEFFETAVSGLI 95
           + VG      P S++  D + ++ G+  D    +   +       +L+V+         I
Sbjct: 19  IVVGHRESSVPFSYY--DNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRI 76

Query: 96  TGLDTNRYDV-LVNVAITPERQKKYDFSIPYIAHRVLLVVRSDQQDIRSFKDLTDKTVAQ 154
             L    +D    +     ERQK+  FS         L+ +                V  
Sbjct: 77  PLLQNGTFDFECGSTTNNVERQKQAAFSDTIFVVGTRLLTKKGGDIKDFADLKGKAVVVT 136

Query: 155 ILGTDLSRFAKELKSHLVFSHNF-----EQSLQLLLSKRTDATMIPDIPFFNFLERRPHD 209
              T      K  +   +            S + L S R  A M+ D        +    
Sbjct: 137 SGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKP 196

Query: 210 GNLFKIADRMKDNSAVAFMMRKGNNKLTRSINEILCAIHLDGTYKKIFDRYFDKNI 265
            N + I  + +   A   M+RK + +  + +++ +  +   G  +K FD++F   I
Sbjct: 197 DN-WDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAEKWFDKWFKNPI 251