RPSBLAST alignment of GI: 254781112 and protein with PDBid: 3del
>3del_B Arginine binding protein; alpha and beta protein (A/B), periplasmic protein, protein binding, transport protein; 1.92A {Chlamydia trachomatis} Length = 242
Score = 124 bits (312), Expect = 2e-29
Identities = 47/225 (20%), Positives = 89/225 (39%), Gaps = 4/225 (1%)
Query: 43 LRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRLNLKVEFFETAVSGLITGLDTNR 102
VGT+ YPP F D RGE+ GFDIDL +E++++L ++ E + LI L +R
Sbjct: 13 FIVGTNATYPPFEF--VDKRGEVVGFDIDLAREISNKLGKTLDVREFSFDALILNLKQHR 70
Query: 103 YDVL-VNVAITPERQKKYDFSIPYIAHRVLLVVRSDQQDIRSFKDLTDKTVAQILGTDLS 161
D + ++ITP R K+ Y LV+ ++ ++VA GT
Sbjct: 71 IDAVITGMSITPSRLKEILMIPYYGEEIKHLVLVFKGENKHPLPLTQYRSVAVQTGTYQE 130
Query: 162 RFAKEL-KSHLVFSHNFEQSLQLLLSKRTDATMIPDIPFFNFLERRPHDGNLFKIADRMK 220
+ + L + H+ + + L ++ ++ ++ L+ P +
Sbjct: 131 AYLQSLSEVHIRSFDSTLEVLMEVMHGKSPVAVLEPSIAQVVLKDFPALSTATIDLPEDQ 190
Query: 221 DNSAVAFMMRKGNNKLTRSINEILCAIHLDGTYKKIFDRYFDKNI 265
+ L I + I +G ++ ++ N+
Sbjct: 191 WVLGYGIGVASDRPALALKIEAAVQEIRKEGVLAELEQKWGLNNL 235