RPSBLAST alignment of GI: 254781112 and protein with PDBid: 3ksx
>3ksx_A Nitrate transport protein; SSUA, alkanesulfonate-binding protein, periplasmic-binding P transport protein; HET: MPO; 1.70A {Xanthomonas axonopodis PV} PDB: 3e4r_A* 3ksj_A* Length = 324
Score = 38.9 bits (90), Expect = 0.001
Identities = 29/196 (14%), Positives = 60/196 (30%), Gaps = 36/196 (18%)
Query: 39 DQSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRLNLKVEFFETAVSG--LIT 96
+ + LR+G Q L+++ K+ + E +G L+
Sbjct: 27 EPAQLRIGYQKAVSSLVLAKQHR----------LLEQ--RFPRTKITWVEFP-AGPQLLE 73
Query: 97 GLDTNRYDVLVNVAITP---ERQKKYDFSIPYIAHR----VLLVVRSDQQDIRSFKDLTD 149
L+ D+ P + D ++V S +R+ DL
Sbjct: 74 ALNVGSIDL-GGAGDIPPLFAQAAGADLLYVGWVPPTPKAETILVPSKS-ALRTVADLKG 131
Query: 150 KTVAQILGTDLSRFAKEL--------KSHLVFSHNFEQSLQLLLSKRTDATMIPDIPFFN 201
K +A G+ + + + + + + DA I D P+++
Sbjct: 132 KRIAFQKGSSAHNLLLRVLAKSGLSMRDITPLYLSPANARAAFAAGQVDAWAIWD-PWYS 190
Query: 202 FLERRPHDGNLFKIAD 217
L G+ +A+
Sbjct: 191 ALTLD---GSARLLAN 203