HHsearch alignment for GI: 254781113 and conserved domain: COG0390
>COG0390 ABC-type uncharacterized transport system, permease component [General function prediction only].
Probab=93.60 E-value=0.45 Score=24.61 Aligned_cols=65 Identities=25% Similarity=0.315 Sum_probs=41.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3333331001100000157899988752833689986517463565778752235764456778788
Q gi|254781113|r 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF 156 (226)
Q Consensus 90 ~~~~~ii~l~l~~~~~~~~i~r~~l~~v~~~~~EAA~alG~s~~q~~~~iilPqal~~ilp~l~~~~ 156 (226)
T Consensus 126 Pi~GMIlGNtm~~~~L~~~~l~~~i~~-~~~eie~~LsLGaTp~~A~~~~~r-~Air~aliPtins~ 190 (256)
T COG0390 126 PIAGMILGNTMVGVSLAYERLVSEIIS-EKDEIEAKLSLGATPKEASRPYIR-SAIRAALIPTINSM 190 (256)
T ss_pred EHHHHHHCCHHHHHHHHHHHHHHHHHC-CHHHHHHHHHCCCCHHHHHHHHHH-HHHHHHHHCCCHHH
T ss_conf 111256434135545578888999740-389999998528988999799999-98888640550255