HHsearch alignment for GI: 254781113 and conserved domain: COG0600
>COG0600 TauC ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].
Probab=99.91 E-value=5e-23 Score=145.16 Aligned_cols=200 Identities=14% Similarity=0.246 Sum_probs=142.8
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHC
Q ss_conf 999999-9999999999999999999999999999999706763799999999999855532222--2211122333210
Q gi|254781113|r 10 IDSFPQ-LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ--LFVIFYGLPHIGI 86 (226)
Q Consensus 10 ~~~~~~-~l~~~l~~Tl~~~~~~~~i~~~lg~~la~~~~~~~~~~~~~~~~~~i~~~r~iP~lv~--l~~~~f~~~~~g~ 86 (226)
T Consensus 51 ~~~~~~g~L~~~~~~Sl~rv~~Gf~la~~~gi~lgil~--g~~~~~~~~l~P~i~~l~~iP~lA~~Pl~ilwfG~g~~s~ 128 (258)
T COG0600 51 VELLASGELFQHLLASLLRVLLGFALAAVLGIPLGILM--GLSRLLERLLDPLVQVLRPIPPLALAPLAILWFGIGETSK 128 (258)
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
T ss_conf 98823755999999999999999999999999999999--8579999999699999931777999999999990796119
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHH
Q ss_conf 14433333310011000001578999887528336899865174635657787522357644567787----88987526
Q gi|254781113|r 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS----EFISILKS 162 (226)
Q Consensus 87 ~~~~~~~~ii~l~l~~~~~~~~i~r~~l~~v~~~~~EAA~alG~s~~q~~~~iilPqal~~ilp~l~~----~~i~lik~ 162 (226)
T Consensus 129 i~i~~~~~ffp--------i~int~~Gvr~v~~~~~~~ar~lgas~~~~l~~v~lP~AlP~i~tgLRia~g~aw~~~Vva 200 (258)
T COG0600 129 IVIAVLGAFFP--------ILINTLDGVRSVDPDLLELARTLGASRWQILRKVILPAALPYIFTGLRIAIGLAWIGLVVA 200 (258)
T ss_pred HHHHHHHHHHH--------HHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999--------9999999987189999999998098977787762053007899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 79999976999999999998323577999999999999999999999999999862137478
Q gi|254781113|r 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 (226)
Q Consensus 163 tsl~s~ig~~el~~~a~~i~~~~~~~~~~~~~~~~i~l~i~~~~~~l~~~lerr~~~~~~~~ 224 (226)
T Consensus 201 E~l~a~~GLG~~i~~a~~~----~~~~~v-~a~i~~i~~lgll~d~~v~~~er~~~~w~~~~ 257 (258)
T COG0600 201 ELLGASSGLGYLILDARNN----LQTDLV-FAAILVIALLGLLLDRLVRLLERRLLRWRPAV 257 (258)
T ss_pred HHHHCCCCHHHHHHHHHHH----CCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9970566687999999985----167899-99999999999999999999999985212368