HHsearch alignment for GI: 254781113 and conserved domain: COG0601
>COG0601 DppB ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].
Probab=99.69 E-value=9.8e-15 Score=99.63 Aligned_cols=205 Identities=14% Similarity=0.223 Sum_probs=140.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH-----HHHHC
Q ss_conf 9999999999999999999999999999999997067637999999999998555322222--2111223-----33210
Q gi|254781113|r 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL--FVIFYGL-----PHIGI 86 (226)
Q Consensus 14 ~~~l~~~l~~Tl~~~~~~~~i~~~lg~~la~~~~~~~~~~~~~~~~~~i~~~r~iP~lv~l--~~~~f~~-----~~~g~ 86 (226)
T Consensus 88 ~~~I~~~lp~Tl~L~~~a~iis~~lgi~LG~~aa~~~~~~~D~~~~~~~~~~~siP~F~~~~lli~~f~~~l~~~P~~g~ 167 (317)
T COG0601 88 ADLILERLPATLELALVALILAVLLGIPLGILAALKRGSWIDRLLRVLSLLGISIPSFWLGLLLILLFSVKLGWLPVGGR 167 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999884999999999999999999999999994489759999999999999602999999999999999676898887
Q ss_pred C-----------CCCCCCCCCCHHHHHHHHHHHHHHHHH-HHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1-----------443333331001100000157899988-7528336899865174635657787522357644567787
Q gi|254781113|r 87 V-----------FDSFVAIIISLTLNFSAYISEIIRSSI-ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 (226)
Q Consensus 87 ~-----------~~~~~~~ii~l~l~~~~~~~~i~r~~l-~~v~~~~~EAA~alG~s~~q~~~~iilPqal~~ilp~l~~ 154 (226)
T Consensus 168 ~~~~~~~~~~~~~~h~iLP~~~L~~~~~a~~~r~~R~~~~e~l~~dyV~~AraKGl~~~~i~~kH~lrNa~iP~vt~~~~ 247 (317)
T COG0601 168 GSAGSWDSFLDALKHLILPALTLGLVSLAGIARLTRSSMLEVLNQDYVRTARAKGLSERRILFKHALRNALLPVITVLGL 247 (317)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHH
T ss_conf 88651567999999999999999999999999999999999986689999998799925103986337648889999999
Q ss_pred HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 8898752679999----976999999999998323577-99999999999999999999999999986213
Q gi|254781113|r 155 EFISILKSTSVAS----TITIPEIFQTAQRIVSTTYQP-LIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 (226)
Q Consensus 155 ~~i~lik~tsl~s----~ig~~el~~~a~~i~~~~~~~-~~~~~~~~~i~l~i~~~~~~l~~~lerr~~~~ 220 (226)
T Consensus 248 ~~~~ll~GavivE~iF~~pGiG~l~~~A--i~~~D~p~i~g~~~~~~~~~i~~nli~Dily~~lDPRir~~ 316 (317)
T COG0601 248 QLGGLLGGAVVVETVFSWPGLGRLLVDA--ILNRDYPVVQGIVLVIALLVILGNLLVDILYALLDPRIRLG 316 (317)
T ss_pred HHHHHHHCHHHHHHHCCCCCHHHHHHHH--HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 9999984687873540877849999999--98248499999999999999999999999999649756688