HHsearch alignment for GI: 254781113 and conserved domain: COG4171
>COG4171 SapC ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].
Probab=98.64 E-value=8.1e-07 Score=56.16 Aligned_cols=143 Identities=11% Similarity=0.134 Sum_probs=84.7
Q ss_pred HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCCCC
Q ss_conf 9999999999----99999999999999999997067637999999999998555322222211-122333210144333
Q gi|254781113|r 18 YAAIVVTLPI----ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI-FYGLPHIGIVFDSFV 92 (226)
Q Consensus 18 ~~~l~~Tl~~----~~~~~~i~~~lg~~la~~~~~~~~~~~~~~~~~~i~~~r~iP~lv~l~~~-~f~~~~~g~~~~~~~ 92 (226)
T Consensus 92 i~Gt~~t~G~allvt~~a~l~g~~lGi~AG~t~g-l~s~~lnHilDt~----lSiPsLLlAiivvaf~g-------psl~ 159 (296)
T COG4171 92 ISGTAPTVGGALLVTLAATICGGVLGIFAGATHG-LRSAVLNHILDTL----LSIPSLLLAIIVVAFAG-------PSLS 159 (296)
T ss_pred HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHCC-------CHHH
T ss_conf 7067523413999999999999999999977777-8999999999999----73589999999999608-------3288
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH-HHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3331001100000157899988-752833689986517463565778752235764456778788987526799999769
Q gi|254781113|r 93 AIIISLTLNFSAYISEIIRSSI-ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 (226)
Q Consensus 93 ~~ii~l~l~~~~~~~~i~r~~l-~~v~~~~~EAA~alG~s~~q~~~~iilPqal~~ilp~l~~~~i~lik~tsl~s~ig~ 171 (226)
T Consensus 160 namfA~~LAllPrfirsiY~avh~EleKeYViaarLdGas~~~lL~~~IlPNI~~~~v~EitrAlsiAiLDI~ALgFl~L 239 (296)
T COG4171 160 NAMFAVWLALLPRFIRSIYSAVHDELEKEYVIAARLDGASTLNLLWFAILPNITAILVTEITRALSIAILDIAALGFLDL 239 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 89999999999999999999999998877877765267661889999972512799999999999999998888613312
Q ss_pred H
Q ss_conf 9
Q gi|254781113|r 172 P 172 (226)
Q Consensus 172 ~ 172 (226)
T Consensus 240 G 240 (296)
T COG4171 240 G 240 (296)
T ss_pred C
T ss_conf 5