HHsearch alignment for GI: 254781113 and conserved domain: COG4174
>COG4174 ABC-type uncharacterized transport system, permease component [General function prediction only].
Probab=98.31 E-value=9.2e-08 Score=61.34 Aligned_cols=206 Identities=15% Similarity=0.205 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH-------HHHH
Q ss_conf 99999999999999999999999999999999706763799999999999855532222--22111223-------3321
Q gi|254781113|r 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ--LFVIFYGL-------PHIG 85 (226)
Q Consensus 15 ~~l~~~l~~Tl~~~~~~~~i~~~lg~~la~~~~~~~~~~~~~~~~~~i~~~r~iP~lv~--l~~~~f~~-------~~~g 85 (226)
T Consensus 126 dLI~eklPVSiSlGlw~tli~YliSIPLGI~KAv~~gs~fDvwsS~viiigyAiP~FlfailLiVlFaGGsy~dwFPLRG 205 (364)
T COG4174 126 DLIKEKLPVSISLGLWSTLIIYLISIPLGIRKAVRNGSRFDVWSSAVIIIGYAIPAFLFAILLIVLFAGGSYFDWFPLRG 205 (364)
T ss_pred HHHHHHCCCEEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEECCCCC
T ss_conf 99997478278768999999999743332888874798420221136887324279999999997415876101200146
Q ss_pred CCCC-------------CC---CCCCCCHHHHHHHHHHHHHHHH-HHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 0144-------------33---3333100110000015789998-87528336899865174635657787522357644
Q gi|254781113|r 86 IVFD-------------SF---VAIIISLTLNFSAYISEIIRSS-IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 (226)
Q Consensus 86 ~~~~-------------~~---~~~ii~l~l~~~~~~~~i~r~~-l~~v~~~~~EAA~alG~s~~q~~~~iilPqal~~i 148 (226)
T Consensus 206 LvSdnf~~L~~~~ki~DYlWH~tLPv~a~v~g~FAt~TlLtKNSFldEi~KqYVvTARAKGlserrvly~HVFRNAMLlv 285 (364)
T COG4174 206 LVSDNFDQLSWYGKITDYLWHITLPVLALVLGGFATLTLLTKNSFLDEIRKQYVVTARAKGLSERRVLYKHVFRNAMLLV 285 (364)
T ss_pred CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf 34588343472788899999988889999986677788875305899976452663231588554526998863427887
Q ss_pred HHHHHHHHHHHHHHHHH-HHH----HHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 56778788987526799-999----7699999999999832357-79999999999999999999999999998621374
Q gi|254781113|r 149 AVPLSSEFISILKSTSV-AST----ITIPEIFQTAQRIVSTTYQ-PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 (226)
Q Consensus 149 lp~l~~~~i~lik~tsl-~s~----ig~~el~~~a~~i~~~~~~-~~~~~~~~~~i~l~i~~~~~~l~~~lerr~~~~~~ 222 (226)
T Consensus 286 iaGfP~afis~FFTgSLLIE~iFSLdGlGllgyea--~v~RDYPvvfgtLyIftL~GL~~~lisDl~yt~vDPRIdFe~r 363 (364)
T COG4174 286 IAGFPAAFISMFFTGSLLIEVIFSLDGLGLLGYEA--VVSRDYPVVFGTLYIFTLIGLLVSLISDLTYTLVDPRIDFEAR 363 (364)
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH--HHCCCCCEEEHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCC
T ss_conf 61780999999971247999987236621110687--8647886421668999999999999754417864575564557