HHsearch alignment for GI: 254781113 and conserved domain: COG4590
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only].
Probab=99.12 E-value=7.5e-10 Score=72.81 Aligned_cols=202 Identities=15% Similarity=0.155 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------
Q ss_conf 999999999999999999999999999970676379999999999985553222222111--------------------
Q gi|254781113|r 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF-------------------- 78 (226)
Q Consensus 19 ~~l~~Tl~~~~~~~~i~~~lg~~la~~~~~~~~~~~~~~~~~~i~~~r~iP~lv~l~~~~-------------------- 78 (226)
T Consensus 430 Pi~FGTLKAA~yAMlfA~PlAvagAiYTAYFM~p~mRRvVKPtIElMeAlPTViiGf~AGlwlAP~vE~hLpgvl~L~lL 509 (733)
T COG4590 430 PIAFGTLKAAAYAMLFAMPLAVAGAIYTAYFMTPSMRRVVKPTIELMEALPTVIIGFLAGLWLAPFVESHLPGVLALMLL 509 (733)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 00044689999999998589999899999953775641100089997533188999988776667776433699999998
Q ss_pred ---------HH---H------------------------HHHHCCCCC------------------------C--CCCCC
Q ss_conf ---------22---3------------------------332101443------------------------3--33331
Q gi|254781113|r 79 ---------YG---L------------------------PHIGIVFDS------------------------F--VAIII 96 (226)
Q Consensus 79 ---------f~---~------------------------~~~g~~~~~------------------------~--~~~ii 96 (226)
T Consensus 510 lpl~ill~G~~wsRLp~~~~~~lPaGW~a~iLiPV~l~~galaLwlsp~Le~~~fggdlr~wL~~d~~~YDQRNALvVG~ 589 (733)
T COG4590 510 LPLSILLLGFIWSRLPKAWLRRLPAGWHALILIPVLLGIGALALWLSPELENALFGGDLRVWLAQDGIGYDQRNALVVGF 589 (733)
T ss_pred HHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEEEE
T ss_conf 67899999777764508773569876234688899999879998717476666726637768652477723244423342
Q ss_pred CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHH
Q ss_conf 001100000157899988752833689986517463565778752235764456778788987526----------7999
Q gi|254781113|r 97 SLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS----------TSVA 166 (226)
Q Consensus 97 ~l~l~~~~~~~~i~r~~l~~v~~~~~EAA~alG~s~~q~~~~iilPqal~~ilp~l~~~~i~lik~----------tsl~ 166 (226)
T Consensus 590 AMGFAvIP~IFsiAEDAiFSVP~sLs~GSLALGATPWQTL~~VVlltAspGIFSAiMiG~GRAVGETMIVLMATGNtP~~ 669 (733)
T COG4590 590 AMGFAVIPTIFSIAEDAIFSVPKSLSDGSLALGATPWQTLIYVVLLTASPGIFSAIMIGLGRAVGETMIVLMATGNTPLL 669 (733)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
T ss_conf 00022220345342244324785446673013687145401457504684188999975111106258999723898521
Q ss_pred HHHHHHHH-HHHHH--------HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99769999-99999--------99832357799999999999999999999999999986213747
Q gi|254781113|r 167 STITIPEI-FQTAQ--------RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 (226)
Q Consensus 167 s~ig~~el-~~~a~--------~i~~~~~~~~~~~~~~~~i~l~i~~~~~~l~~~lerr~~~~~~~ 223 (226)
T Consensus 670 ~~nIFeGmRtlaAniAvEmPEseVgs~HyRv---LFL~ALvLltFTF~vNtLAE~vRqRLRekY~s 732 (733)
T COG4590 670 DWNIFEGMRTLAANIAVEMPESEVGSAHYRV---LFLAALVLLTFTFAVNTLAEWVRQRLREKYRS 732 (733)
T ss_pred CCCHHHHHHHHHHHHHHCCCHHHCCCCEEEH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 2228777888765521217654406633426---89999999999999989999999999988623