HHsearch alignment for GI: 254781113 and conserved domain: COG4597
>COG4597 BatB ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].
Probab=100.00 E-value=2.5e-38 Score=229.18 Aligned_cols=212 Identities=27% Similarity=0.507 Sum_probs=188.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HH--
Q ss_conf 999999999999999999999999999999999999970676379999999999985553222222111223----33--
Q gi|254781113|r 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL----PH-- 83 (226)
Q Consensus 10 ~~~~~~~l~~~l~~Tl~~~~~~~~i~~~lg~~la~~~~~~~~~~~~~~~~~~i~~~r~iP~lv~l~~~~f~~----~~-- 83 (226)
T Consensus 82 ~~TYgra~~VGllNTl~Va~~gIi~atIiGfliGIaRL-S~NWLi~kl~~vYvEiFRNiPpLL~IfFWYf~Vl~~LP~ar 160 (397)
T COG4597 82 DSTYGRAFIVGLLNTLLVAALGIITATIIGFLIGIARL-SDNWLIRKLSTVYVEIFRNIPPLLQIFFWYFGVLSVLPGAR 160 (397)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 88335788998898999999999999999999877772-31389999989999998268579999999999995288700
Q ss_pred ----------------------H---------------------------------------------------------
Q ss_conf ----------------------2---------------------------------------------------------
Q gi|254781113|r 84 ----------------------I--------------------------------------------------------- 84 (226)
Q Consensus 84 ----------------------~--------------------------------------------------------- 84 (226)
T Consensus 161 ~s~~l~~~~~L~nrG~~~p~P~~geG~~~~~lA~~~~I~~s~~~~r~ak~rQ~~TGq~~~~~~~~~~LiiglPll~~~~~ 240 (397)
T COG4597 161 QSVSLPDLIFLSNRGLYFPSPQWGEGFIAFILALVMAIVASVFLARWAKTRQIATGQQFRTWPTAAVLIIGLPLLAQWLF 240 (397)
T ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHC
T ss_conf 01115630135256401477310365179999999999999999999887787507857623568899845088999972
Q ss_pred H-------------------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 1-------------------014433333310011000001578999887528336899865174635657787522357
Q gi|254781113|r 85 G-------------------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTI 145 (226)
Q Consensus 85 g-------------------~~~~~~~~~ii~l~l~~~~~~~~i~r~~l~~v~~~~~EAA~alG~s~~q~~~~iilPqal 145 (226)
T Consensus 241 G~pl~~d~P~~~~FNl~GG~~v~PEf~aL~laLs~YTaaFIAEiVRaGI~~VskGQtEAa~sLGL~~~~t~RlVivPQAl 320 (397)
T COG4597 241 GAPLTFDVPALGGFNLTGGMVVIPEFAALFLALSFYTAAFIAEIVRAGIQAVSKGQTEAARSLGLRSSLTLRLVIVPQAL 320 (397)
T ss_pred CCCCEECCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEEECCCC
T ss_conf 89721205211443566870565789999999999999999999987650257661778986289975447999841101
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 64456778788987526799999769999999999983235779999999999999999999999999998621374
Q gi|254781113|r 146 TTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 (226)
Q Consensus 146 ~~ilp~l~~~~i~lik~tsl~s~ig~~el~~~a~~i~~~~~~~~~~~~~~~~i~l~i~~~~~~l~~~lerr~~~~~~ 222 (226)
T Consensus 321 RiIIPPLTSQYLNLtKNSSLAiAIGYpDlv~vagT~lNQTGQAvEvv~i~m~vYL~lSL~tSl~MN~~N~rmalvER 397 (397)
T COG4597 321 RIIIPPLTSQYLNLTKNSSLAIAIGYPDLVAVAGTVLNQTGQAVEVVAIWMLVYLSLSLTTSLLMNWYNRRMALVER 397 (397)
T ss_pred EEECCCCCHHHHHHCCCCHHHHCCCCCCEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 56417621888733235423200277766887330224556078999999999999999999999998765432049