HHsearch alignment for GI: 254781113 and conserved domain: PRK09881
>PRK09881 ATP-dependent peptide transporter membrane subunit; Provisional.
Probab=99.81 E-value=5.2e-18 Score=117.60 Aligned_cols=199 Identities=13% Similarity=0.096 Sum_probs=148.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 99999999999999999999999999999997067637999999999998555322222211122333210144333333
Q gi|254781113|r 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII 95 (226)
Q Consensus 16 ~l~~~l~~Tl~~~~~~~~i~~~lg~~la~~~~~~~~~~~~~~~~~~i~~~r~iP~lv~l~~~~f~~~~~g~~~~~~~~~i 95 (226)
T Consensus 88 rll~G~r~sL~i~l~~~~i~~~iG~~lG~~aGy~gG-~~D~il~ri~Dv~~aiP~lll~i~l~~~~g------~~~~~~i 160 (296)
T PRK09881 88 RVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGG-RADAIIMRIMDIMLSIPSLVLTMALAAALG------PSLFNAM 160 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHCCCCCCHHHHHHHHHHHC------CCHHHHH
T ss_conf 988879999999999999999999999998888176-076655677763015860577788876516------7516888
Q ss_pred CCHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Q ss_conf 1001100000157899988752-8336899865174635657787522357644567787889875267999997699--
Q gi|254781113|r 96 ISLTLNFSAYISEIIRSSIISI-PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP-- 172 (226)
Q Consensus 96 i~l~l~~~~~~~~i~r~~l~~v-~~~~~EAA~alG~s~~q~~~~iilPqal~~ilp~l~~~~i~lik~tsl~s~ig~~-- 172 (226)
T Consensus 161 l~i~l~~w~~~aR~vR~~~l~i~~~~yV~AAr~~G~s~~~Ii~rhiLPni~~~liv~~~~~~~~aIl~ea~LsFLGlG~~ 240 (296)
T PRK09881 161 LAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQ 240 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999879999999999999996349999999839886785414276661889999999999999999999999037899
Q ss_pred -------HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf -------9999999998323577999999999999999999999999999862137478
Q gi|254781113|r 173 -------EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 (226)
Q Consensus 173 -------el~~~a~~i~~~~~~~~~~~~~~~~i~l~i~~~~~~l~~~lerr~~~~~~~~ 224 (226)
T Consensus 241 pp~~sWG~mi~~~~~~~~~--~~-w~~~~Pg~~i~l~vl~~nllgdgLrd~ldPr~r~R 296 (296)
T PRK09881 241 QPSAEWGAMVANGRNYVLD--QW-WYCAFPGAAILLTAVGFNLFGDGIRDLLDPKAGGK 296 (296)
T ss_pred CCCCCHHHHHHHHHHHHHH--CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 9998599999999999987--72-99999999999999999999999999819655798