HHsearch alignment for GI: 254781113 and conserved domain: PRK10914
>PRK10914 dipeptide transporter permease DppB; Provisional.
Probab=99.73 E-value=4.1e-16 Score=107.23 Aligned_cols=205 Identities=15% Similarity=0.154 Sum_probs=150.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH-----HHHHCC
Q ss_conf 999999999999999999999999999999997067637999999999998555322222--2111223-----332101
Q gi|254781113|r 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL--FVIFYGL-----PHIGIV 87 (226)
Q Consensus 15 ~~l~~~l~~Tl~~~~~~~~i~~~lg~~la~~~~~~~~~~~~~~~~~~i~~~r~iP~lv~l--~~~~f~~-----~~~g~~ 87 (226)
T Consensus 90 ~~i~~~lp~Tl~L~~~a~il~~~igi~lGi~aa~~~~~~~D~~~~~~~~~~~siP~F~lallli~if~~~l~~~P~~G~~ 169 (339)
T PRK10914 90 EEFVPRFKATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRV 169 (339)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99987272589999999999999999999999985275111367888986123069999999999999995747776767
Q ss_pred CC--------------------------------CCCCCCCCHHHHHHHHHHHHHHHHH-HHCCCCHHHHHHHHCCCHHH
Q ss_conf 44--------------------------------3333331001100000157899988-75283368998651746356
Q gi|254781113|r 88 FD--------------------------------SFVAIIISLTLNFSAYISEIIRSSI-ISIPKGQWDASYAIGLTRKQ 134 (226)
Q Consensus 88 ~~--------------------------------~~~~~ii~l~l~~~~~~~~i~r~~l-~~v~~~~~EAA~alG~s~~q 134 (226)
T Consensus 170 ~~~~~~~~~~p~~g~~~~~~~~~g~~~~~~~~l~hliLP~l~L~l~~~a~~~r~~R~~~~~~l~~dyV~~ArakGl~~~~ 249 (339)
T PRK10914 170 SDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMR 249 (339)
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 65312466666554100111420451137889999999999999999999999999999999834999999985949331
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCCCCHHHH-HHHHHHHHHHHHHHHHHH
Q ss_conf 57787522357644567787889875267999997----6999999999998323577999-999999999999999999
Q gi|254781113|r 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTI----TIPEIFQTAQRIVSTTYQPLII-YCELAFVYLILTSFCYII 209 (226)
Q Consensus 135 ~~~~iilPqal~~ilp~l~~~~i~lik~tsl~s~i----g~~el~~~a~~i~~~~~~~~~~-~~~~~~i~l~i~~~~~~l 209 (226)
T Consensus 250 i~~~h~lrnal~P~it~~g~~~~~ll~GsvivE~vF~~pGiG~l~~~A--i~~rD~pvi~g~~l~~~~~~i~~nli~Dil 327 (339)
T PRK10914 250 VIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA--LQRRDYPVVQGGVLLVATMIILVNLLVDLL 327 (339)
T ss_pred EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 404983986099899999999999997699986986775769999999--983588999999999999999999999999
Q ss_pred HHHHHHHHHHCC
Q ss_conf 999999862137
Q gi|254781113|r 210 QIKIESSVTQHT 221 (226)
Q Consensus 210 ~~~lerr~~~~~ 221 (226)
T Consensus 328 ~~~lDPRiR~kr 339 (339)
T PRK10914 328 YGVVNPRIRHKK 339 (339)
T ss_pred HHHCCCCCCCCC
T ss_conf 986284047889