HHsearch alignment for GI: 254781113 and conserved domain: PRK11123
>PRK11123 arginine transporter permease subunit ArtQ; Provisional.
Probab=100.00 E-value=0 Score=349.51 Aligned_cols=211 Identities=23% Similarity=0.448 Sum_probs=200.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Q ss_conf 99999999999999999999999999999999999970676379999999999985553222222111223332------
Q gi|254781113|r 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI------ 84 (226)
Q Consensus 11 ~~~~~~l~~~l~~Tl~~~~~~~~i~~~lg~~la~~~~~~~~~~~~~~~~~~i~~~r~iP~lv~l~~~~f~~~~~------ 84 (226)
T Consensus 2 n~f~~L-l~G~~~Tl~l~~~a~~~g~~lG~~la~~r-~s~~~~l~~~~~~yv~~~RgtP~lv~l~~~yfg~p~l~~~l~~ 79 (238)
T PRK11123 2 NEFFPL-ASAAGMTVGLAVCALIVGLALAMFFAVWE-SAKWRPVAWPGTALVTLLRGLPEILVVLFIYFGSSQLLLTLSD 79 (238)
T ss_pred CCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 847999-99999999999999999999999999999-8886889999999999991675999999999952898876310
Q ss_pred ------------------HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf ------------------10144333333100110000015789998875283368998651746356577875223576
Q gi|254781113|r 85 ------------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 (226)
Q Consensus 85 ------------------g~~~~~~~~~ii~l~l~~~~~~~~i~r~~l~~v~~~~~EAA~alG~s~~q~~~~iilPqal~ 146 (226)
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~f~~avial~l~~~Ay~aEi~R~gi~sVp~GQ~EAa~alGms~~q~~r~IilPQa~r 159 (238)
T PRK11123 80 GFTLNLGFVQIPVQMDIENFEVSPFLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWR 159 (238)
T ss_pred HHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 00001001110100121345646999999999999999999999999983999999999984989999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 44567787889875267999997699999999999832357799999999999999999999999999986213747
Q gi|254781113|r 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 (226)
Q Consensus 147 ~ilp~l~~~~i~lik~tsl~s~ig~~el~~~a~~i~~~~~~~~~~~~~~~~i~l~i~~~~~~l~~~lerr~~~~~~~ 223 (226)
T Consensus 160 ~~lP~l~n~~i~liK~TSL~s~Igv~El~~~a~~i~~~t~~~~e~y~~~a~iYlii~~~l~~~~~~lEkR~~r~~rr 236 (238)
T PRK11123 160 HALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIIAAAIYLVITLISQYILKRIDLRFTRFERR 236 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99738999999999984999999899999999999971345699999999999999999999999999985422578