HHSEARCH alignment of GI: 254781113 and SCOP domain: d2onkc1

Alignment
>d2onkc1 f.58.1.1 (C:1-252) Molybdate/tungstate transport system permease protein WtpB (ModB) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.91  E-value=2.9e-24  Score=149.50  Aligned_cols=157  Identities=13%  Similarity=0.093  Sum_probs=125.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------
Q ss_conf             999999999999999999999999999999997067637999999999998555322222211122333210--------
Q gi|254781113|r   15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI--------   86 (226)
Q Consensus        15 ~~l~~~l~~Tl~~~~~~~~i~~~lg~~la~~~~~~~~~~~~~~~~~~i~~~r~iP~lv~l~~~~f~~~~~g~--------   86 (226)
                      +.+++++++|+.+++.++++++++|+++|....+.+.+ .+...+........+|.++..+......+..+.        
T Consensus        45 ~~~~~~~~nSl~~~~~~~~i~~i~g~~la~~l~~~~~~-~~~~~~~~~~~p~~ip~~v~~~~~~~~~~~~~~~~~~~~~~  123 (252)
T d2onkc1          45 PAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFP-GKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFSPLK  123 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCS-SHHHHHHHHHHHHHSCHHHHHHHHHHHHSTTSTTTTTCSSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             78999999999999999999999999999999873132-16899999875216871777777764123321000124544


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             14433333310011000001578999887528336899865174635657787522357644567787889875267999
Q gi|254781113|r   87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA  166 (226)
Q Consensus        87 ~~~~~~~~ii~l~l~~~~~~~~i~r~~l~~v~~~~~EAA~alG~s~~q~~~~iilPqal~~ilp~l~~~~i~lik~tsl~  166 (226)
                      ....+...+++.++...||...+.+++++++|++++||||++|+|+||++|||++|++.|.+.++....++..+++....
T Consensus       124 ~~~~~~~iii~~~~~~~p~~~~~~~~~~~~i~~~~~eaA~~lGas~~~~~~~i~lP~~~p~i~~~~~l~~~~~~~~~~~~  203 (252)
T d2onkc1         124 FVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAV  203 (252)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_pred             CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             20013321101001121103689999997503888878876699833254698708768899999999998899998887


Q ss_pred             HHHHHH
Q ss_conf             997699
Q gi|254781113|r  167 STITIP  172 (226)
Q Consensus       167 s~ig~~  172 (226)
                      ..+|.+
T Consensus       204 ~~~~~~  209 (252)
T d2onkc1         204 VVIAYY  209 (252)
T ss_dssp             HTTCCS
T ss_pred             HHHCCC
T ss_conf             511489


SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: MetI-like
superfamily: MetI-like
family: MetI-like
domain: Molybdate/tungstate transport system permease protein WtpB (ModB)
species: Archaeoglobus fulgidus [TaxId: 2234]