HHSEARCH alignment of GI: 254781113 and SCOP domain: d3d31c1

Alignment
>d3d31c1 f.58.1.1 (C:13-260) Sulfate/molybdate ABC transporter, permease protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=99.91  E-value=9.4e-24  Score=146.67  Aligned_cols=168  Identities=11%  Similarity=0.122  Sum_probs=128.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             08999999999999999999999999999999999999999997067637999999999998555322222211122333
Q gi|254781113|r    4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH   83 (226)
Q Consensus         4 ~w~~~~~~~~~~~l~~~l~~Tl~~~~~~~~i~~~lg~~la~~~~~~~~~~~~~~~~~~i~~~r~iP~lv~l~~~~f~~~~   83 (226)
                      ||.++......+.+++++++|+..++.+++++.++|.++|....+++.+ .+...+....+...+|.++..+........
T Consensus        32 ~~~~~~~~~~~~~~~~~l~~Sl~~a~~s~~i~~~lg~~~a~~~~~~~~~-~~~~~~~l~~~p~~ip~vv~~~~~~~~~~~  110 (248)
T d3d31c1          32 DFSGLVKAAGNRSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFP-GKRLVESIIDVPVVVPHTVAGIALLTVFGS  110 (248)
T ss_dssp             THHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCT-THHHHHHHHHGGGTSCHHHHHHHHHHHHST
T ss_pred             CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
T ss_conf             7899999985989999999999999999999999999999999864651-256899999999999972000244520343


Q ss_pred             HH----------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             21----------01443333331001100000157899988752833689986517463565778752235764456778
Q gi|254781113|r   84 IG----------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS  153 (226)
Q Consensus        84 ~g----------~~~~~~~~~ii~l~l~~~~~~~~i~r~~l~~v~~~~~EAA~alG~s~~q~~~~iilPqal~~ilp~l~  153 (226)
                      .+          ...+.+...+++..+...|+....++++++++|++++|||+++|+|+||++|||++|++.|.++.+..
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~iii~~~~~~~p~~~~~~~~~l~~i~~~~~eAA~~lGas~~~~~~~I~lP~~~p~i~~~~~  190 (248)
T d3d31c1         111 RGLIGEPLESYIQFRDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSV  190 (248)
T ss_dssp             TSTTTGGGTTTCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             21111122221124564200100110110036888889999710336899987631042347789889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q ss_conf             7889875267999997699
Q gi|254781113|r  154 SEFISILKSTSVASTITIP  172 (226)
Q Consensus       154 ~~~i~lik~tsl~s~ig~~  172 (226)
                      ..+...+++......+|.+
T Consensus       191 l~f~~~~~~~~~~~~l~~~  209 (248)
T d3d31c1         191 MTWARAISEFGAVVILAYY  209 (248)
T ss_dssp             HHHHHHHTCCHHHHHHHCT
T ss_pred             HHHHHHHHHHHHHHHHCCC
T ss_conf             9999999999988733189


SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: MetI-like
superfamily: MetI-like
family: MetI-like
domain: Sulfate/molybdate ABC transporter, permease protein
species: Methanosarcina acetivorans [TaxId: 2214]