BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781113|ref|YP_003065526.1| amino acid ABC transporter (permease) [Candidatus Liberibacter asiaticus str. psy62] (226 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254781113|ref|YP_003065526.1| amino acid ABC transporter (permease) [Candidatus Liberibacter asiaticus str. psy62] gi|254040790|gb|ACT57586.1| amino acid ABC transporter (permease) [Candidatus Liberibacter asiaticus str. psy62] Length = 226 Score = 440 bits (1131), Expect = e-122, Method: Compositional matrix adjust. Identities = 226/226 (100%), Positives = 226/226 (100%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF Sbjct: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG Sbjct: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR Sbjct: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK Sbjct: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 >gi|315122482|ref|YP_004062971.1| amino acid ABC transporter (permease) [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495884|gb|ADR52483.1| amino acid ABC transporter (permease) [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 239 Score = 347 bits (891), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 174/225 (77%), Positives = 197/225 (87%), Gaps = 1/225 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M EWFN+ IDSFPQLLYAA VTLPIA ISF+ S+I+G I +IRI F I S IMH Sbjct: 1 MNSEWFNVAIDSFPQLLYAAFFVTLPIALISFIPSIIVGLSITMIRICFPGKI-SFIMHL 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YVWIFRGTPLLVQLF+IFYGLPHIGIV D F AI+IS TLNFSAYISEIIRSSI+SIPKG Sbjct: 60 YVWIFRGTPLLVQLFIIFYGLPHIGIVLDCFSAIVISFTLNFSAYISEIIRSSILSIPKG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QWDA+Y+IGLTR+QTIRHIILPQ + SA PLSSEFISILKSTS+AST+T+PEIFQTAQR Sbjct: 120 QWDAAYSIGLTRQQTIRHIILPQIVVISAAPLSSEFISILKSTSLASTVTLPEIFQTAQR 179 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 IVSTTYQPLIIYCE+A +YLILTSFCYIIQ+KIES + ++TYS++ Sbjct: 180 IVSTTYQPLIIYCEIAIIYLILTSFCYIIQMKIESKLKKYTYSMN 224 >gi|319781053|ref|YP_004140529.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166941|gb|ADV10479.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 226 Score = 244 bits (624), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 111/217 (51%), Positives = 161/217 (74%), Gaps = 1/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+++S P LL+AA++ T+P+ +SFV+ L +G A+ R+F +++L+ FYVW Sbjct: 3 HWLQLMLESLPSLLWAALIFTVPLTLLSFVLGLTVGLGAALARLFGPKPLVALV-RFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLF+IFYGLP +GI+ D+F A +I TLN AY SEIIR++I S+PKGQW+ Sbjct: 62 IFRGTPLLVQLFLIFYGLPSVGILLDAFTAALIGFTLNIGAYTSEIIRAAIGSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG+T Q +R ILPQ + PLS+ FIS++K TS+A+ IT+PE+FQ AQRIV+ Sbjct: 122 AAYSIGMTWSQAMRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPEMFQAAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TTY+PLI+Y E A +YL L+S +Q ++E+ + ++ Sbjct: 182 TTYEPLILYVEAAILYLALSSVLSALQTRLETRLNRY 218 >gi|260461455|ref|ZP_05809702.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259032525|gb|EEW33789.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 226 Score = 243 bits (620), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 110/217 (50%), Positives = 160/217 (73%), Gaps = 1/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+++S P LL+AA++ T+P+ +SFV+ L +G A+ R+F +++L+ FYVW Sbjct: 3 HWLQLMLESLPSLLWAALIFTVPLTLLSFVLGLTVGLGAALGRLFGPKPLVALV-RFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLF+IFYGLP +GI+ D+F A +I TLN AY SEIIR++I S+PKGQW+ Sbjct: 62 IFRGTPLLVQLFLIFYGLPSVGILLDAFTAALIGFTLNIGAYTSEIIRAAIGSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG+T Q +R ILPQ + PLS+ FIS++K TS+A+ IT+PE+FQ AQRIV+ Sbjct: 122 AAYSIGMTWSQAMRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPEMFQAAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TTY+PLI+Y E A +YL ++S +Q ++E + ++ Sbjct: 182 TTYEPLILYVEAAILYLAMSSVLSALQTRLEERLNRY 218 >gi|13473305|ref|NP_104872.1| amino acid ABC transporter (permease) [Mesorhizobium loti MAFF303099] gi|14024053|dbj|BAB50658.1| amino acid ABC transporter (permease) [Mesorhizobium loti MAFF303099] Length = 226 Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 110/217 (50%), Positives = 158/217 (72%), Gaps = 1/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+++S P LL+AA++ T+P+ SFV+ L +G A+ R+F ++ L+ FYVW Sbjct: 3 HWLQLMLESLPSLLWAALIFTVPLTLSSFVLGLTVGLGAALGRLFGPKPLVMLV-RFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLF+IFYGLP +GI+ D+F A +I TLN AY SEIIR++I S+PKGQW+ Sbjct: 62 IFRGTPLLVQLFLIFYGLPSVGILLDAFTAALIGFTLNIGAYTSEIIRAAIGSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG+T Q +R ILPQ + PLS+ FIS++K TS+A+ IT+PE+FQ AQRIV+ Sbjct: 122 AAYSIGMTWSQAMRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPEMFQAAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TTY+PLI+Y E A +YL ++S +Q ++E + ++ Sbjct: 182 TTYEPLILYVEAAILYLAMSSVLSALQTRLEERLNRY 218 >gi|288961662|ref|YP_003451972.1| polar amino acid transport system permease protein [Azospirillum sp. B510] gi|288913942|dbj|BAI75428.1| polar amino acid transport system permease protein [Azospirillum sp. B510] Length = 226 Score = 239 bits (609), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 111/217 (51%), Positives = 156/217 (71%), Gaps = 1/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ S P LL+AA+V T+P+ SF + LI+G AV+R+F ++ + FYVW Sbjct: 3 HWLTLMATSLPSLLWAALVFTVPLTLASFALGLIVGLVAAVVRLF-GPAPLAAAVRFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I RGTPLLVQLF+IFYGLP GIV D+F A +I TLN SAY SEIIR+ I S+PKGQW+ Sbjct: 62 IIRGTPLLVQLFLIFYGLPSAGIVLDAFPAALIGFTLNVSAYTSEIIRAVIGSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ Q +R ILPQ + PLS+ FIS++K TS+A+ IT+PE+FQ AQRIV+ Sbjct: 122 AAYSIGMSWPQAMRRTILPQAARVAVPPLSNSFISLVKDTSLAAAITVPELFQAAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T+Y+PLI+Y E A +YL+L+S +Q+++E + ++ Sbjct: 182 TSYEPLILYVEAALIYLVLSSVLSALQVRLERRLNRY 218 >gi|187924662|ref|YP_001896304.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187715856|gb|ACD17080.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 225 Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 109/217 (50%), Positives = 153/217 (70%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +L+ S LLYA +V T+P+ ISF I L + F +A++R+F ++ I+ FYVW+ Sbjct: 4 WLHLMAQSLWPLLYAGLVFTVPLTLISFAIGLALAFLVALVRLFGPKWAVA-IVRFYVWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRG+PLLVQLFVIFYGLP++GIV D A II +LN AY SE+IR I SIPKGQW+A Sbjct: 63 FRGSPLLVQLFVIFYGLPNVGIVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++G+TR+Q +R ILPQ + PLS+ FI+++K TS+A+ +T+PE+FQ AQRI S Sbjct: 123 AYSMGMTREQALRRAILPQAARVALPPLSNSFIALVKDTSLAAVLTVPEVFQAAQRIASV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TY+PLI+Y E A VYL+ +S Q+++E +H Sbjct: 183 TYEPLILYTEAALVYLVFSSVLSSAQVRLERKFGRHA 219 >gi|91784367|ref|YP_559573.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia xenovorans LB400] gi|296158455|ref|ZP_06841286.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|91688321|gb|ABE31521.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] gi|295891399|gb|EFG71186.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 225 Score = 236 bits (601), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 109/217 (50%), Positives = 153/217 (70%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +L+ S LLYA +V T+P+ ISF I L + F +A++R+F ++ I+ FYVW+ Sbjct: 4 WLHLMAQSLWPLLYAGLVFTVPLTLISFAIGLALAFLVALVRLFGPKWAVA-IVRFYVWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRG+PLLVQLFVIFYGLP++GIV D A II +LN AY SE+IR I SIPKGQW+A Sbjct: 63 FRGSPLLVQLFVIFYGLPNVGIVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++G+TR+Q +R ILPQ + PLS+ FI+++K TS+A+ +T+PE+FQ AQRI S Sbjct: 123 AYSMGMTREQALRRAILPQAARVALPPLSNSFIALVKDTSLAAVLTVPEVFQAAQRIASV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TY+PLI+Y E A VYL+ +S Q+++E +H Sbjct: 183 TYEPLILYTEAALVYLVFSSVLSSAQVRLERKFGRHA 219 >gi|227823794|ref|YP_002827767.1| putative amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] gi|227342796|gb|ACP27014.1| putative amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 245 Score = 235 bits (600), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 106/217 (48%), Positives = 157/217 (72%), Gaps = 1/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W NL+ +S P LL+A ++ T+P+ +SFV+ L +G A++R+F ++ + FYVW Sbjct: 22 NWLNLMAESLPTLLWAGLIFTVPLTLLSFVLGLSLGLVTALVRLFAPAPFVA-VARFYVW 80 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQLFVIFYGLP + I+ D+F A +I TLN AY SEIIR++I S+P+GQW+ Sbjct: 81 VIRGTPLLVQLFVIFYGLPSMNILLDAFPAALIGFTLNIGAYTSEIIRATISSVPRGQWE 140 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ Q +R ILPQ + PLS+ FIS++K TS+A+ IT+PE+FQTAQRIV+ Sbjct: 141 AAYSIGMSWSQVMRRTILPQATRVAVPPLSNTFISLVKDTSLAAAITVPELFQTAQRIVA 200 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TTY+PLI+Y E A +YL ++S +Q+++E ++ Sbjct: 201 TTYEPLILYIEAALIYLAMSSVLSALQVRLEKRFARY 237 >gi|163857187|ref|YP_001631485.1| putative amino-acid ABC transporter, permease protein [Bordetella petrii DSM 12804] gi|163260915|emb|CAP43217.1| putative amino-acid ABC transporter, permease protein [Bordetella petrii] Length = 226 Score = 235 bits (599), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 108/217 (49%), Positives = 152/217 (70%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+IDSF LL+A +V T+P+ +SF L++ F +A+IR+F +++L+ FYVW+ Sbjct: 4 WLQLMIDSFWPLLHAGLVFTVPLTLLSFAGGLVLAFIVALIRLFGPAPLVALV-RFYVWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLFVIFYGLP +GIV D A +I TLN AY SE+IR +I SIPKGQW+A Sbjct: 63 IRGTPLLVQLFVIFYGLPSVGIVLDPLPAALIGFTLNVGAYNSEVIRGAIESIPKGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++ +TR Q +R +LPQ + PL++ FIS++K TS+A+ +T+PEIFQ AQRI + Sbjct: 123 AYSLSMTRGQAMRRTVLPQAARVAVPPLANSFISLVKDTSLAAVLTVPEIFQAAQRIAAV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TY+PLI+Y E A +YL+ +S Q ++E QH Sbjct: 183 TYEPLILYTEAALIYLVFSSALSAAQTRLERRYGQHA 219 >gi|150398331|ref|YP_001328798.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150029846|gb|ABR61963.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 226 Score = 234 bits (598), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 108/217 (49%), Positives = 156/217 (71%), Gaps = 1/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ DS P LL+A ++ T+P+ +SF + L +G AV+R+F + +++ FYVW Sbjct: 3 HWLQLMADSLPALLWAGLIFTIPLTLLSFTLGLALGLVTAVVRLF-APAPFAVVARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQLFVIFYGLP +GI+ D+F A +I TLN AY SEIIR+ I S+P+GQW+ Sbjct: 62 VIRGTPLLVQLFVIFYGLPSMGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPRGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IGL+ Q +R ILPQ + PLS+ FIS++K TS+A+ IT+PE+FQTAQRIV+ Sbjct: 122 AAYSIGLSWSQAMRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQTAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T+Y+PLI+Y E A +YL+++S +Q K+E ++ Sbjct: 182 TSYEPLILYIEAALIYLVMSSVLSALQGKLEQRFARY 218 >gi|148558506|ref|YP_001257650.1| amino acid ABC transporter permease [Brucella ovis ATCC 25840] gi|148369791|gb|ABQ62663.1| amino acid ABC transporter, permease protein [Brucella ovis ATCC 25840] Length = 226 Score = 234 bits (598), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 110/222 (49%), Positives = 159/222 (71%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W L+ DS P LL+A ++ T+P+ +SF L + A++R+F + +S + FYVW Sbjct: 3 DWLQLMADSLPTLLWAGLIFTIPLTLLSFTFGLALSLLTALVRLF-APVWLSSVARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP IGI D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 62 IFRGTPLLVQLFVIFYGLPSIGIYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 122 AAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL L+S +Q+++E ++ +++ Sbjct: 182 TTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLE 223 >gi|298293508|ref|YP_003695447.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296930019|gb|ADH90828.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 226 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 109/222 (49%), Positives = 155/222 (69%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W +L++ S LL+A +V T+P+ +SF + L +GF A+ R++ + L FYVW Sbjct: 3 HWLDLMLQSLGPLLWAGLVFTVPLTLLSFALGLTLGFLTALARLYGPRPLAGL-ARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I RGTPLLVQLFVIFYGLP +GI+ D+F A +I TLN AY SEI+R+ I SIPKGQW+ Sbjct: 62 IIRGTPLLVQLFVIFYGLPSVGILLDAFPAALIGFTLNVGAYSSEIVRAVIASIPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 ASY+IG++ Q +R +LPQ T+ PLS+ FIS++K TS+A+ +T+PE+FQ AQRIV+ Sbjct: 122 ASYSIGMSWSQALRRTVLPQAARTAVPPLSNTFISLVKDTSLAAAVTVPELFQAAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TY+PLIIY E A +YL L+S +Q ++E + + + V+ Sbjct: 182 VTYEPLIIYIEAALIYLALSSVLSALQDRLEKRLARSSGLVE 223 >gi|37528306|ref|NP_931651.1| hypothetical protein plu4485 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787744|emb|CAE16857.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 233 Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 108/221 (48%), Positives = 160/221 (72%), Gaps = 1/221 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+ WFNL++DSF +LYA T+P+ I+F + +I+GF +A+IR++ +I+ + F Sbjct: 1 MEPSWFNLVLDSFWPMLYAGFAFTIPLTLITFTLGIILGFIVALIRLYGPKPLIA-VAKF 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YVW+ RGTPLLVQLF+IFY LP +GI +F + +I TLN AY SEIIR++++S+PKG Sbjct: 60 YVWLIRGTPLLVQLFLIFYALPSVGITLGAFTSAVIGFTLNIGAYTSEIIRATLLSVPKG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+Y+IG++ Q++R IILPQ + PLS+ FIS++K TS+AS IT+PE+F AQR Sbjct: 120 QWEAAYSIGMSWTQSLRRIILPQAARIAIPPLSNTFISLVKDTSLASVITVPELFLAAQR 179 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 I + TYQPLI+Y E A +YLI++S +Q ++E +Q + Sbjct: 180 IAAVTYQPLILYTEAAILYLIISSVLSSLQTRLEKKFSQKS 220 >gi|323526704|ref|YP_004228857.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323383706|gb|ADX55797.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 225 Score = 233 bits (594), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 107/217 (49%), Positives = 152/217 (70%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +L+ S LLYA +V T+P+ SF I L + F +A++R+F ++ ++ FYVW+ Sbjct: 4 WLHLMAQSLWPLLYAGLVFTVPLTLASFAIGLALAFIVALVRLFGPKWAVA-VVRFYVWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRG+PLLVQLFVIFYGLP++GIV D A II +LN AY SE+IR I SIPKGQW+A Sbjct: 63 FRGSPLLVQLFVIFYGLPNVGIVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++G+TR+Q +R ILPQ + PLS+ FI+++K TS+A+ +T+PE+FQ AQRI S Sbjct: 123 AYSMGMTREQALRRAILPQAARVALPPLSNSFIALVKDTSLAAVLTVPEVFQAAQRIASV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TY+PLI+Y E A VYL+ +S Q+++E +H Sbjct: 183 TYEPLILYTEAALVYLLFSSVLSSAQVRLERKFGRHA 219 >gi|33592469|ref|NP_880113.1| putative amino-acid ABC transporter, permease protein [Bordetella pertussis Tohama I] gi|33601481|ref|NP_889041.1| putative amino-acid ABC transporter, permease protein [Bordetella bronchiseptica RB50] gi|33572115|emb|CAE41655.1| putative amino-acid ABC transporter, permease protein [Bordetella pertussis Tohama I] gi|33575917|emb|CAE32996.1| putative amino-acid ABC transporter, permease protein [Bordetella bronchiseptica RB50] gi|332381886|gb|AEE66733.1| putative amino-acid ABC transporter, permease protein [Bordetella pertussis CS] Length = 226 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 105/217 (48%), Positives = 153/217 (70%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L++DSF LL+A ++ T+P+ +SF L + F +A++R+F I++L M FYVW+ Sbjct: 4 WLQLMLDSFWPLLHAGLMFTVPLTLLSFAAGLALAFVVALLRLFGPWPIVAL-MRFYVWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLFVIFYGLP +GIV D A +I TLN AY SE+IR +I SIP+GQW+A Sbjct: 63 IRGTPLLVQLFVIFYGLPSVGIVLDPLPAALIGFTLNVGAYNSEVIRGAIESIPRGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++ +TR Q +R +LPQ + PL++ FI+++K TS+A+ +T+PEIFQ AQRI + Sbjct: 123 AYSLSMTRGQAMRRTVLPQAARVAVPPLANSFIALVKDTSLAAVLTVPEIFQAAQRIAAV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TY+PLI+Y E A +YL+ +S +Q+++E QH Sbjct: 183 TYEPLILYTEAALIYLVFSSALSSLQVRLEKRFGQHA 219 >gi|307729124|ref|YP_003906348.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307583659|gb|ADN57057.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 225 Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 107/217 (49%), Positives = 151/217 (69%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +L+ S LLYA +V T+P+ SF I L + F +A++R+F ++ + FYVW+ Sbjct: 4 WLHLMAQSLWPLLYAGLVFTVPLTLASFAIGLALAFIVALVRLFGPKWAVAAV-RFYVWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRG+PLLVQLFVIFYGLP++GIV D A II +LN AY SE+IR I SIPKGQW+A Sbjct: 63 FRGSPLLVQLFVIFYGLPNVGIVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++G+TR+Q +R ILPQ + PLS+ FI+++K TS+A+ +T+PE+FQ AQRI S Sbjct: 123 AYSMGMTREQALRRAILPQAARVALPPLSNSFIALVKDTSLAAVLTVPEVFQAAQRIASV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TY+PLI+Y E A VYL+ +S Q+++E +H Sbjct: 183 TYEPLILYTEAALVYLLFSSVLSSAQVRLERKFGRHA 219 >gi|327191793|gb|EGE58795.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli CNPAF512] Length = 226 Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 108/217 (49%), Positives = 155/217 (71%), Gaps = 1/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ +S P LL+A +V T+P+ +SF LI+G A+ R+F ++ ++ FYVW Sbjct: 3 HWLQLMAESLPSLLWAGLVFTIPLTLLSFTFGLILGLVTAIARLFGPAPVV-VVARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQLFVIFYGLP IGI+ D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 62 VIRGTPLLVQLFVIFYGLPSIGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ + PLS+ FIS++K TS+A+ IT+PE+FQ AQRIV+ Sbjct: 122 AAYSIGMSWRQAMSRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TTY+PLI+Y E A +YL+L+S +Q+++E ++ Sbjct: 182 TTYEPLILYIEAALIYLVLSSILSQLQVRLERRFARY 218 >gi|170696019|ref|ZP_02887157.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170139099|gb|EDT07289.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 225 Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 107/217 (49%), Positives = 151/217 (69%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +L+ S LLYA +V T+P+ SF I L + F +A++R+F ++ + FYVW+ Sbjct: 4 WLHLMAQSLWPLLYAGLVFTVPLTLASFAIGLALAFIVALVRLFGPKWAVAAV-RFYVWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRG+PLLVQLFVIFYGLP++GIV D A II +LN AY SE+IR I SIPKGQW+A Sbjct: 63 FRGSPLLVQLFVIFYGLPNVGIVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++G+TR+Q +R ILPQ + PLS+ FI+++K TS+A+ +T+PE+FQ AQRI S Sbjct: 123 AYSMGMTREQALRRAILPQATRVALPPLSNSFIALVKDTSLAAVLTVPEVFQAAQRIASV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TY+PLI+Y E A VYL+ +S Q+++E +H Sbjct: 183 TYEPLILYTEAALVYLLFSSVLSSAQVRLERKFGRHA 219 >gi|218510008|ref|ZP_03507886.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli Brasil 5] Length = 225 Score = 232 bits (592), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 108/217 (49%), Positives = 155/217 (71%), Gaps = 1/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ +S P LL+A +V T+P+ +SF LI+G A+ R+F ++ ++ FYVW Sbjct: 2 HWLQLMAESLPSLLWAGLVFTIPLTLLSFTFGLILGLVTAIARLFGPAPVV-VVARFYVW 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQLFVIFYGLP IGI+ D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 61 VIRGTPLLVQLFVIFYGLPSIGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ + PLS+ FIS++K TS+A+ IT+PE+FQ AQRIV+ Sbjct: 121 AAYSIGMSWRQAMSRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVA 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TTY+PLI+Y E A +YL+L+S +Q+++E ++ Sbjct: 181 TTYEPLILYIEAALIYLVLSSILSQLQVRLERRFARY 217 >gi|241206848|ref|YP_002977944.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860738|gb|ACS58405.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 226 Score = 232 bits (592), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 107/217 (49%), Positives = 154/217 (70%), Gaps = 1/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ +S P LL+A ++ T+P+ +SFV L +G A+ R+F +S + FYVW Sbjct: 3 HWLQLMAESLPSLLWAGLIFTIPLTLLSFVFGLALGLATAIARLF-GPMPLSAVARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQLFVIFYGLP +GI+ D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 62 VIRGTPLLVQLFVIFYGLPSLGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ + PLS+ FIS++K TS+A+ IT+PE+FQ AQRIV+ Sbjct: 122 AAYSIGMSWRQAMSRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TTY+PLI+Y E A +YL+L+S +Q+++E ++ Sbjct: 182 TTYEPLILYIEAALIYLVLSSVLSQLQVRLERRFARY 218 >gi|186476288|ref|YP_001857758.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phymatum STM815] gi|184192747|gb|ACC70712.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 225 Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 108/217 (49%), Positives = 154/217 (70%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +L+ +S LLYA +V T+P+ +SF I + + F +A+IR+F + ++ I+ FYVW+ Sbjct: 4 WLHLMGESLWPLLYAGLVFTVPLTLVSFGIGIALAFIVALIRLFGPNWSVA-IVRFYVWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRG+PLLVQLFVIFYGLP++GIV D A II +LN AY SE+IR I SIPKGQW+A Sbjct: 63 FRGSPLLVQLFVIFYGLPNVGIVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++G+TR Q +R ILPQ + PLS+ FI+++K TS+A+ +T+PEIFQ AQRI S Sbjct: 123 AYSMGMTRAQALRRAILPQAARVALPPLSNSFIALVKDTSLAAVLTVPEIFQAAQRIASV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TY+PLI+Y E A +YL+ +S Q+++E +H Sbjct: 183 TYEPLILYTEAALIYLVFSSVLSSAQVRLERRFGRHA 219 >gi|311108430|ref|YP_003981283.1| L-cystine transporter permease TcyB [Achromobacter xylosoxidans A8] gi|310763119|gb|ADP18568.1| L-cystine transport system permease protein TcyB [Achromobacter xylosoxidans A8] Length = 249 Score = 231 bits (590), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 154/222 (69%), Gaps = 1/222 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L++DSF LL+A ++ T+P+ +SF + L + F +A+IR+F +++L+ FYVW+ Sbjct: 27 WVQLMLDSFWPLLHAGLMFTVPLTLMSFALGLALAFVVALIRLFGPAPLVALV-RFYVWL 85 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLFVIFYGLP +GIV D A +I TLN AY SE+IR +I SI KGQW+A Sbjct: 86 IRGTPLLVQLFVIFYGLPSVGIVLDPLPAALIGFTLNVGAYNSEVIRGAIESITKGQWEA 145 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++ +TR Q +R ILPQ + PLS+ FI+++K TS+A+ +T+PEIFQ AQRI + Sbjct: 146 AYSLSMTRAQALRRTILPQAARVAVPPLSNSFIALVKDTSLAAVLTVPEIFQAAQRIAAV 205 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 TY+PLI+Y E A +YL+ +S Q+++E QH +K Sbjct: 206 TYEPLILYTEAALIYLVFSSVLSAAQVRLERRFGQHAVFNEK 247 >gi|293607250|ref|ZP_06689591.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292814342|gb|EFF73482.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 249 Score = 231 bits (589), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 153/222 (68%), Gaps = 1/222 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+ DSF LL+A +V T+P+ +SF + L + F +A+IR+F +++L+ FYVW+ Sbjct: 27 WVQLMADSFWPLLHAGLVFTVPLTLMSFALGLALAFVVALIRLFGPAPLVALV-RFYVWL 85 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLFVIFYGLP +GIV D A +I TLN AY SE+IR +I SI KGQW+A Sbjct: 86 IRGTPLLVQLFVIFYGLPSVGIVLDPLPAALIGFTLNVGAYNSEVIRGAIESITKGQWEA 145 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++ +TR Q +R ILPQ + PLS+ FI+++K TS+A+ +T+PEIFQ AQRI + Sbjct: 146 AYSLSMTRGQALRRTILPQAARVAVPPLSNSFIALVKDTSLAAVLTVPEIFQAAQRIAAV 205 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 TY+PLI+Y E A +YL+ +S Q+++E QH +K Sbjct: 206 TYEPLILYTEAALIYLVFSSVLSAAQVRLERRFGQHAVFSEK 247 >gi|33596085|ref|NP_883728.1| putative amino-acid ABC transporter, permease protein [Bordetella parapertussis 12822] gi|33573088|emb|CAE36730.1| putative amino-acid ABC transporter, permease protein [Bordetella parapertussis] Length = 226 Score = 231 bits (589), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 105/217 (48%), Positives = 152/217 (70%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L++DSF LL+A ++ T+P+ +SF L + F +A++R+F I++L M FYVW+ Sbjct: 4 WLQLMLDSFWPLLHAGLMFTVPLTLLSFAAGLALAFVVALLRLFGPWPIVAL-MRFYVWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLFVIFYGLP +GIV D A +I TLN AY SE+IR +I SIP+GQW+A Sbjct: 63 IRGTPLLVQLFVIFYGLPSVGIVLDPLPAALIGFTLNVGAYNSEVIRGAIESIPRGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++ +TR Q +R +LPQ + PL++ FI+++K TS+A+ +T+PEIFQ AQRI + Sbjct: 123 AYSLSMTRGQAMRRTVLPQAARVAVPPLANSFIALVKDTSLAAVLTVPEIFQAAQRIAAV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TY+PLI+Y E A +YL+ +S +Q+ +E QH Sbjct: 183 TYEPLILYTEAALIYLVFSSALSSLQVHLEKRFGQHA 219 >gi|317404628|gb|EFV85028.1| amino-acid ABC transporter [Achromobacter xylosoxidans C54] Length = 249 Score = 231 bits (588), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 106/222 (47%), Positives = 153/222 (68%), Gaps = 1/222 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+ DSF LL+A +V T+P+ +SF + L + F +A+IR+F +++L+ FYVW+ Sbjct: 27 WVQLMADSFWPLLHAGLVFTVPLTLMSFALGLALAFVVALIRLFGPAPLVALV-RFYVWL 85 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLFVIFYGLP +G+V D A +I TLN AY SE+IR +I SI KGQW+A Sbjct: 86 IRGTPLLVQLFVIFYGLPSVGVVLDPLPAALIGFTLNVGAYNSEVIRGAIESISKGQWEA 145 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++ +TR Q +R +LPQ + PLS+ FI+++K TS+A+ +T+PEIFQ AQRI + Sbjct: 146 AYSLSMTRGQALRRTVLPQAARVAVPPLSNSFIALVKDTSLAAVLTVPEIFQAAQRIAAV 205 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 TY+PLI+Y E A +YL+ +S Q+++E QH +K Sbjct: 206 TYEPLILYTEAALIYLVFSSVLSAAQVRLERRFGQHAVFSEK 247 >gi|116254361|ref|YP_770199.1| transmembrane component of transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259009|emb|CAK10118.1| putative transmembrane component of transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 226 Score = 229 bits (585), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 106/217 (48%), Positives = 153/217 (70%), Gaps = 1/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ +S P LL+A ++ T+P+ +SF L +G A+ R+F +S + FYVW Sbjct: 3 HWLQLMAESLPSLLWAGLIFTIPLTLLSFAFGLTLGLATAIGRLF-GPMPLSAVARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQLFVIFYGLP +GI+ D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 62 VIRGTPLLVQLFVIFYGLPSLGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ + PLS+ FIS++K TS+A+ IT+PE+FQ AQRIV+ Sbjct: 122 AAYSIGMSWRQAMSRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TTY+PLI+Y E A +YL+L+S +Q+++E ++ Sbjct: 182 TTYEPLILYIEAALIYLVLSSVLSQLQVRLERRFARY 218 >gi|256157635|ref|ZP_05455553.1| amino acid ABC transporter, permease protein [Brucella ceti M490/95/1] gi|256253390|ref|ZP_05458926.1| amino acid ABC transporter, permease protein [Brucella ceti B1/94] Length = 226 Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 161/222 (72%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +WF L+ DS P LL+A ++ T+P+ +SF L +G A++R+F + +S + FYVW Sbjct: 3 DWFQLMADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLF-APVWLSSVARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP IGI D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 62 IFRGTPLLVQLFVIFYGLPSIGIYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 122 AAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL L+S +Q+++E ++ +++ Sbjct: 182 TTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLE 223 >gi|242241097|ref|YP_002989278.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242133154|gb|ACS87456.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 221 Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 107/218 (49%), Positives = 155/218 (71%), Gaps = 1/218 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ DSF LL A I T+P+A +SF++ L +G +A++R++ + FYVW Sbjct: 3 SWLQLMADSFWSLLSAGIQFTVPLAILSFILGLAVGVIVALLRLY-GPKPLKWFCDFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQLF+IFYGLP+ GI D+F A +I TLN AY SEI+R +I+S+PKGQW+ Sbjct: 62 VIRGTPLLVQLFLIFYGLPNAGITLDAFPAALIGFTLNVGAYTSEIVRGAILSVPKGQWN 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y++G+ Q IR +I+PQ++ S PLS+ FIS++K TS+A+ IT+PE+F AQRIVS Sbjct: 122 AAYSLGMNGAQAIRWVIVPQSVFVSLPPLSNTFISLIKDTSLAAVITVPEMFLAAQRIVS 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TY+PLI+Y E A +YL+ ++F IQ+++E +HT Sbjct: 182 VTYEPLILYVEAALIYLLFSTFLGKIQVRLEKYYQRHT 219 >gi|253991464|ref|YP_003042820.1| amino acid ABC transporter extracellular solute-binding protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782914|emb|CAQ86079.1| similar to extracellular solute-binding protein-amino acid abc transporter [Photorhabdus asymbiotica] Length = 233 Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 105/221 (47%), Positives = 158/221 (71%), Gaps = 1/221 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+ WF L++DSF +LYA T+P+ I+F + +I+GF +A+IR++ ++ + F Sbjct: 1 MEPSWFTLVLDSFWPMLYAGFTFTIPLTLITFTLGIILGFIVALIRLYGPKPFVA-VAKF 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YVW+ RGTPLLVQLF+IFY LP +GI +F + +I TLN AY SE+IR++++S+PKG Sbjct: 60 YVWLIRGTPLLVQLFLIFYALPSVGITLGAFTSAVIGFTLNIGAYTSEVIRATLLSVPKG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+Y+IG++ Q++R IILPQ + PLS+ FIS++K TS+AS IT+PE+F AQR Sbjct: 120 QWEAAYSIGMSWTQSLRRIILPQAARIAIPPLSNTFISLVKDTSLASVITVPELFLAAQR 179 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 I + TYQPLI+Y E A +YLI++S +Q ++E +Q + Sbjct: 180 IAAVTYQPLILYTEAAIIYLIISSVLSSLQARLEKKFSQKS 220 >gi|161620737|ref|YP_001594623.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella canis ATCC 23365] gi|254703029|ref|ZP_05164857.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis bv. 3 str. 686] gi|260568042|ref|ZP_05838511.1| cystine transport system permease [Brucella suis bv. 4 str. 40] gi|161337548|gb|ABX63852.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365] gi|260154707|gb|EEW89788.1| cystine transport system permease [Brucella suis bv. 4 str. 40] Length = 226 Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 113/222 (50%), Positives = 161/222 (72%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W L+ DS P LL+A ++ T+P+ +SF L +G A++R+F S +S + FYVW Sbjct: 3 DWLQLMADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLFAS-VWLSSVARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP IGI D+F A +IS TLN AY SEIIR+ I S+PKGQW+ Sbjct: 62 IFRGTPLLVQLFVIFYGLPSIGIYLDAFPAALISFTLNIGAYSSEIIRAVISSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 122 AAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL L+S +Q+++E ++ +++ Sbjct: 182 TTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLE 223 >gi|261220512|ref|ZP_05934793.1| amino acid ABC transporter permease [Brucella ceti B1/94] gi|265996140|ref|ZP_06108697.1| amino acid ABC transporter permease [Brucella ceti M490/95/1] gi|260919096|gb|EEX85749.1| amino acid ABC transporter permease [Brucella ceti B1/94] gi|262550437|gb|EEZ06598.1| amino acid ABC transporter permease [Brucella ceti M490/95/1] Length = 250 Score = 228 bits (582), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 161/222 (72%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +WF L+ DS P LL+A ++ T+P+ +SF L +G A++R+F + +S + FYVW Sbjct: 27 DWFQLMADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLF-APVWLSSVARFYVW 85 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP IGI D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 86 IFRGTPLLVQLFVIFYGLPSIGIYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWE 145 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 146 AAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVA 205 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL L+S +Q+++E ++ +++ Sbjct: 206 TTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLE 247 >gi|23500425|ref|NP_699865.1| amino acid ABC transporter permease [Brucella suis 1330] gi|23464048|gb|AAN33870.1| amino acid ABC transporter, permease protein [Brucella suis 1330] Length = 226 Score = 228 bits (582), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 161/222 (72%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W L+ DS P LL+A ++ T+P+ +SF L +G A++R+F + +S + FYVW Sbjct: 3 DWLQLMADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLF-APVWLSSVARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP IGI D+F A +IS TLN AY SEIIR+ I S+PKGQW+ Sbjct: 62 IFRGTPLLVQLFVIFYGLPSIGIYLDAFPAALISFTLNIGAYSSEIIRAVISSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 122 AAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL L+S +Q+++E ++ +++ Sbjct: 182 TTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLE 223 >gi|15967029|ref|NP_387382.1| putative amino-acid transport system permease ABC transporter protein [Sinorhizobium meliloti 1021] gi|307302495|ref|ZP_07582252.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|307316175|ref|ZP_07595619.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|15076302|emb|CAC47855.1| Putative amino-acid transport system permease ABC transporter [Sinorhizobium meliloti 1021] gi|306898015|gb|EFN28757.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306903165|gb|EFN33755.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 226 Score = 228 bits (582), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 107/217 (49%), Positives = 154/217 (70%), Gaps = 1/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ DS P LL+A ++ T+P+ +SF + L +G AV+R+F + + FYVW Sbjct: 3 HWLQLMADSLPALLWAGLIFTIPLTLLSFTLGLALGLVTAVVRLFAP-APFAAVARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQLFVIFYGLP +GI+ D+F A +I TLN AY SEIIR+ I S+P+GQW+ Sbjct: 62 VIRGTPLLVQLFVIFYGLPSMGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPRGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ Q +R ILPQ + PLS+ FIS++K TS+A+ IT+PE+FQTAQRIV+ Sbjct: 122 AAYSIGMSWSQAMRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQTAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T+Y+PLI+Y E A +YL+++S +Q K+E ++ Sbjct: 182 TSYEPLILYIEAALIYLVMSSVLSALQGKLEQRFARY 218 >gi|118593286|ref|ZP_01550671.1| putative amino-acid transport system permease abc transporter protein [Stappia aggregata IAM 12614] gi|118434177|gb|EAV40833.1| putative amino-acid transport system permease abc transporter protein [Stappia aggregata IAM 12614] Length = 226 Score = 228 bits (581), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 108/211 (51%), Positives = 152/211 (72%), Gaps = 1/211 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+IDS P LL+A + T+P+ +SF + L +G AV R+F ++ L+ YVW Sbjct: 3 HWLQLMIDSLPTLLWAGVKFTIPLTLLSFALGLGLGLTTAVTRLFAPLPLV-LLARGYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 +FRGTPLLVQLFVIFYGLP IGI+ D+F A +I TLN AY SEIIR++I S+PKGQW+ Sbjct: 62 VFRGTPLLVQLFVIFYGLPSIGILLDAFPAALIGFTLNVGAYSSEIIRAAISSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+++ G+T +Q + ILPQ + PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 122 AAFSTGMTWRQAMLRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQSAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TTY+PLI+Y E A +YL ++S +Q ++E Sbjct: 182 TTYEPLILYIEAALIYLAMSSVLAWLQERLE 212 >gi|261753640|ref|ZP_05997349.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686] gi|261743393|gb|EEY31319.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686] Length = 250 Score = 228 bits (580), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 161/222 (72%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W L+ DS P LL+A ++ T+P+ +SF L +G A++R+F + +S + FYVW Sbjct: 27 DWLQLMADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLF-ASVWLSSVARFYVW 85 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP IGI D+F A +IS TLN AY SEIIR+ I S+PKGQW+ Sbjct: 86 IFRGTPLLVQLFVIFYGLPSIGIYLDAFPAALISFTLNIGAYSSEIIRAVISSVPKGQWE 145 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 146 AAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVA 205 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL L+S +Q+++E ++ +++ Sbjct: 206 TTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLE 247 >gi|86359584|ref|YP_471476.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86283686|gb|ABC92749.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 219 Score = 227 bits (579), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 106/210 (50%), Positives = 152/210 (72%), Gaps = 1/210 (0%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +S P LL+A ++ T+P+ +SF LI+G A+ R+F S ++ I FYVW+ RGTPL Sbjct: 3 ESLPSLLWAGLIFTIPLTLLSFTFGLILGLITAIARLF-SPAPVAAIARFYVWVIRGTPL 61 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LVQLFVIFYGLP +GI+ D+F A +I TLN AY SEIIR+ I S+PKGQW+A+Y+IG+ Sbjct: 62 LVQLFVIFYGLPSVGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGM 121 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + +Q + ILPQ + PLS+ FIS++K TS+A+ IT+PE+FQ AQRIV+TTY+PLI Sbjct: 122 SWRQAMSRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATTYEPLI 181 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +Y E A +YL+L+S +Q+++E ++ Sbjct: 182 LYIEAALIYLVLSSILSQLQVRLERRFARY 211 >gi|254699907|ref|ZP_05161735.1| amino acid ABC transporter, permease protein [Brucella suis bv. 5 str. 513] gi|254705829|ref|ZP_05167657.1| amino acid ABC transporter, permease protein [Brucella pinnipedialis M163/99/10] gi|254711057|ref|ZP_05172868.1| amino acid ABC transporter, permease protein [Brucella pinnipedialis B2/94] gi|256015453|ref|YP_003105462.1| amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|256029438|ref|ZP_05443052.1| amino acid ABC transporter, permease protein [Brucella pinnipedialis M292/94/1] gi|256059129|ref|ZP_05449338.1| amino acid ABC transporter, permease protein [Brucella neotomae 5K33] gi|260167469|ref|ZP_05754280.1| amino acid ABC transporter, permease protein [Brucella sp. F5/99] gi|261313256|ref|ZP_05952453.1| polar amino acid ABC transporter [Brucella pinnipedialis M163/99/10] gi|261750383|ref|ZP_05994092.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513] gi|255998113|gb|ACU49800.1| amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|261302282|gb|EEY05779.1| polar amino acid ABC transporter [Brucella pinnipedialis M163/99/10] gi|261740136|gb|EEY28062.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513] Length = 226 Score = 227 bits (579), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 111/222 (50%), Positives = 160/222 (72%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W L+ DS P LL+A ++ T+P+ +SF L +G A++R+F + +S + FYVW Sbjct: 3 DWLQLMADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLF-APVWLSSVARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP IGI D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 62 IFRGTPLLVQLFVIFYGLPSIGIYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 122 AAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL L+S +Q+++E ++ +++ Sbjct: 182 TTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLE 223 >gi|254720342|ref|ZP_05182153.1| amino acid ABC transporter, permease protein [Brucella sp. 83/13] gi|306837436|ref|ZP_07470312.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653] gi|306407479|gb|EFM63682.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653] Length = 226 Score = 227 bits (579), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 111/222 (50%), Positives = 160/222 (72%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W L+ DS P LL+A ++ T+P+ +SF L +G A++R+F + +S + FYVW Sbjct: 3 DWLQLMADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLF-APVWLSSVARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP IGI D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 62 IFRGTPLLVQLFVIFYGLPSIGIYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 122 AAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLVKDTSLAAAITVPELFQSAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL L+S +Q+++E ++ +++ Sbjct: 182 TTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLE 223 >gi|62317471|ref|YP_223324.1| amino acid ABC transporter permease [Brucella abortus bv. 1 str. 9-941] gi|83269452|ref|YP_418743.1| binding-protein dependent transport system inner membrane protein [Brucella melitensis biovar Abortus 2308] gi|254690968|ref|ZP_05154222.1| Cystine transport system permease protein [Brucella abortus bv. 6 str. 870] gi|254695721|ref|ZP_05157549.1| Cystine transport system permease protein [Brucella abortus bv. 3 str. Tulya] gi|254698752|ref|ZP_05160580.1| Cystine transport system permease protein [Brucella abortus bv. 2 str. 86/8/59] gi|254732196|ref|ZP_05190774.1| Cystine transport system permease protein [Brucella abortus bv. 4 str. 292] gi|256256153|ref|ZP_05461689.1| Cystine transport system permease protein [Brucella abortus bv. 9 str. C68] gi|260544708|ref|ZP_05820529.1| cystine transport system permease [Brucella abortus NCTC 8038] gi|260759992|ref|ZP_05872340.1| polar amino acid ABC transporter [Brucella abortus bv. 4 str. 292] gi|62197664|gb|AAX75963.1| amino acid ABC transporter, permease protein [Brucella abortus bv. 1 str. 9-941] gi|82939726|emb|CAJ12723.1| Binding-protein-dependent transport systems inner membrane component [Brucella melitensis biovar Abortus 2308] gi|260097979|gb|EEW81853.1| cystine transport system permease [Brucella abortus NCTC 8038] gi|260670310|gb|EEX57250.1| polar amino acid ABC transporter [Brucella abortus bv. 4 str. 292] Length = 226 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 111/222 (50%), Positives = 160/222 (72%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W L+ DS P LL+A ++ T+P+ +SF L +G A++R+F + +S + FYVW Sbjct: 3 DWLQLMADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLF-APVWLSSVARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP IGI D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 62 IFRGTPLLVQLFVIFYGLPSIGIYLDAFPAALIGFTLNIGAYSSEIIRTVISSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 122 AAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL L+S +Q+++E ++ +++ Sbjct: 182 TTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLE 223 >gi|190893857|ref|YP_001980399.1| amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190699136|gb|ACE93221.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 219 Score = 226 bits (577), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 106/215 (49%), Positives = 154/215 (71%), Gaps = 1/215 (0%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +S P LL+A +V T+P+ +SF LI+G A+ R+F ++ ++ FYVW+ RGTPL Sbjct: 3 ESLPSLLWAGLVFTIPLTLLSFTFGLILGLITAIARLFGPAPVV-VVARFYVWVIRGTPL 61 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LVQLFVIFYGLP IGI+ D+F A +I TLN AY SEIIR+ I S+PKGQW+A+Y+IG+ Sbjct: 62 LVQLFVIFYGLPSIGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGM 121 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + +Q + ILPQ + PLS+ FIS++K TS+A+ IT+PE+FQ AQRIV+TTY+PLI Sbjct: 122 SWRQAMSRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATTYEPLI 181 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +Y E A +YL L+S +Q+++E ++ +++ Sbjct: 182 LYIEAALIYLALSSILSQLQVRLERRFARYGGTLE 216 >gi|294853534|ref|ZP_06794206.1| polar amino acid transport system permease [Brucella sp. NVSL 07-0026] gi|294819189|gb|EFG36189.1| polar amino acid transport system permease [Brucella sp. NVSL 07-0026] Length = 252 Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 111/222 (50%), Positives = 160/222 (72%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W L+ DS P LL+A ++ T+P+ +SF L +G A++R+F + +S + FYVW Sbjct: 29 DWLQLMADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLF-APVWLSSVARFYVW 87 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP IGI D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 88 IFRGTPLLVQLFVIFYGLPSIGIYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWE 147 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 148 AAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVA 207 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL L+S +Q+++E ++ +++ Sbjct: 208 TTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLE 249 >gi|225629164|ref|ZP_03787197.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti str. Cudo] gi|261323080|ref|ZP_05962277.1| amino acid ABC transporter permease [Brucella neotomae 5K33] gi|261756882|ref|ZP_06000591.1| cystine transport system permease [Brucella sp. F5/99] gi|225615660|gb|EEH12709.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti str. Cudo] gi|261299060|gb|EEY02557.1| amino acid ABC transporter permease [Brucella neotomae 5K33] gi|261736866|gb|EEY24862.1| cystine transport system permease [Brucella sp. F5/99] Length = 250 Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 111/222 (50%), Positives = 160/222 (72%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W L+ DS P LL+A ++ T+P+ +SF L +G A++R+F + +S + FYVW Sbjct: 27 DWLQLMADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLF-APVWLSSVARFYVW 85 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP IGI D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 86 IFRGTPLLVQLFVIFYGLPSIGIYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWE 145 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 146 AAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVA 205 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL L+S +Q+++E ++ +++ Sbjct: 206 TTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLE 247 >gi|261318648|ref|ZP_05957845.1| polar amino acid ABC transporter [Brucella pinnipedialis B2/94] gi|265986447|ref|ZP_06099004.1| amino acid ABC transporter permease [Brucella pinnipedialis M292/94/1] gi|261297871|gb|EEY01368.1| polar amino acid ABC transporter [Brucella pinnipedialis B2/94] gi|264658644|gb|EEZ28905.1| amino acid ABC transporter permease [Brucella pinnipedialis M292/94/1] Length = 254 Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 111/222 (50%), Positives = 160/222 (72%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W L+ DS P LL+A ++ T+P+ +SF L +G A++R+F + +S + FYVW Sbjct: 31 DWLQLMADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLF-APVWLSSVARFYVW 89 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP IGI D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 90 IFRGTPLLVQLFVIFYGLPSIGIYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWE 149 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 150 AAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVA 209 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL L+S +Q+++E ++ +++ Sbjct: 210 TTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLE 251 >gi|189022725|ref|YP_001932466.1| Cystine transport system permease protein [Brucella abortus S19] gi|237817022|ref|ZP_04596014.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308 A] gi|260756561|ref|ZP_05868909.1| polar amino acid ABC transporter [Brucella abortus bv. 6 str. 870] gi|260763232|ref|ZP_05875564.1| polar amino acid ABC transporter [Brucella abortus bv. 2 str. 86/8/59] gi|260882379|ref|ZP_05893993.1| amino acid ABC transporter permease [Brucella abortus bv. 9 str. C68] gi|261216130|ref|ZP_05930411.1| polar amino acid ABC transporter [Brucella abortus bv. 3 str. Tulya] gi|297249512|ref|ZP_06933213.1| polar amino acid transport system permease [Brucella abortus bv. 5 str. B3196] gi|189021299|gb|ACD74020.1| Cystine transport system permease protein [Brucella abortus S19] gi|237787835|gb|EEP62051.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308 A] gi|260673653|gb|EEX60474.1| polar amino acid ABC transporter [Brucella abortus bv. 2 str. 86/8/59] gi|260676669|gb|EEX63490.1| polar amino acid ABC transporter [Brucella abortus bv. 6 str. 870] gi|260871907|gb|EEX78976.1| amino acid ABC transporter permease [Brucella abortus bv. 9 str. C68] gi|260917737|gb|EEX84598.1| polar amino acid ABC transporter [Brucella abortus bv. 3 str. Tulya] gi|297173381|gb|EFH32745.1| polar amino acid transport system permease [Brucella abortus bv. 5 str. B3196] Length = 250 Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 111/222 (50%), Positives = 160/222 (72%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W L+ DS P LL+A ++ T+P+ +SF L +G A++R+F + +S + FYVW Sbjct: 27 DWLQLMADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLF-APVWLSSVARFYVW 85 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP IGI D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 86 IFRGTPLLVQLFVIFYGLPSIGIYLDAFPAALIGFTLNIGAYSSEIIRTVISSVPKGQWE 145 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 146 AAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVA 205 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL L+S +Q+++E ++ +++ Sbjct: 206 TTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLE 247 >gi|225686457|ref|YP_002734429.1| amino acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella melitensis ATCC 23457] gi|256043565|ref|ZP_05446492.1| cystine transport system permease protein [Brucella melitensis bv. 1 str. Rev.1] gi|256111397|ref|ZP_05452423.1| cystine transport system permease protein [Brucella melitensis bv. 3 str. Ether] gi|265999077|ref|ZP_05464935.2| cystine transport system permease [Brucella melitensis bv. 2 str. 63/9] gi|225642562|gb|ACO02475.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella melitensis ATCC 23457] gi|263092136|gb|EEZ16433.1| cystine transport system permease [Brucella melitensis bv. 2 str. 63/9] gi|326410835|gb|ADZ67899.1| amino acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella melitensis M28] gi|326554126|gb|ADZ88765.1| amino acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella melitensis M5-90] Length = 226 Score = 226 bits (575), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 110/222 (49%), Positives = 160/222 (72%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W L+ DS P LL+A ++ T+P+ +SF L +G A++R+F + +S + FYVW Sbjct: 3 DWLQLMADSLPTLLWAGLIFTIPLILLSFTFGLALGLLTALVRLF-APVWLSSVARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP IG+ D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 62 IFRGTPLLVQLFVIFYGLPSIGVYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 122 AAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL L+S +Q+++E ++ +++ Sbjct: 182 TTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLE 223 >gi|17988945|ref|NP_541578.1| cystine transport system permease protein [Brucella melitensis bv. 1 str. 16M] gi|17984778|gb|AAL53842.1| cystine transport system permease protein [Brucella melitensis bv. 1 str. 16M] Length = 244 Score = 226 bits (575), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 110/222 (49%), Positives = 160/222 (72%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W L+ DS P LL+A ++ T+P+ +SF L +G A++R+F + +S + FYVW Sbjct: 21 DWLQLMADSLPTLLWAGLIFTIPLILLSFTFGLALGLLTALVRLF-APVWLSSVARFYVW 79 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP IG+ D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 80 IFRGTPLLVQLFVIFYGLPSIGVYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWE 139 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 140 AAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVA 199 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL L+S +Q+++E ++ +++ Sbjct: 200 TTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLE 241 >gi|317492207|ref|ZP_07950636.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919546|gb|EFV40876.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Enterobacteriaceae bacterium 9_2_54FAA] Length = 231 Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 109/210 (51%), Positives = 152/210 (72%), Gaps = 1/210 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+IDSF LL A + TLP+A +SF+ +I+GF A+ R++ + + I FYVW+ Sbjct: 16 WLQLMIDSFWSLLSAGLQFTLPLAILSFIGGIIVGFITALARLY-APKPVKWIFDFYVWV 74 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP GI D+F A +I TL+ AY SEIIR +IIS+PKGQW+A Sbjct: 75 IRGTPLLVQLFLIFYGLPSAGITLDAFPAALIGFTLSVGAYTSEIIRGAIISVPKGQWEA 134 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 SY+IG++ Q +R +ILPQ++ S PLS+ FIS++K TS+A+ IT+PE+F AQRIVS Sbjct: 135 SYSIGMSSSQAMRRVILPQSVFVSLPPLSNSFISLIKDTSLAAVITVPEMFLAAQRIVSV 194 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TY+PLI+Y E A +YL+ ++ +Q ++E Sbjct: 195 TYEPLILYVEAALIYLMFSTVLGKLQNRLE 224 >gi|307129013|ref|YP_003881029.1| putative transporter membrane protein [Dickeya dadantii 3937] gi|306526542|gb|ADM96472.1| predicted transporter subunit: membrane component of ABC superfamily [Dickeya dadantii 3937] Length = 221 Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 105/217 (48%), Positives = 156/217 (71%), Gaps = 1/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ DSF LL A + T+P+A +SFV+ L+IG +A++R++ T + I FYVW Sbjct: 3 SWLQLMADSFWSLLSAGLTFTVPLAILSFVLGLMIGVLVALLRLY-GPTPLKKICDFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQLF+IFYGLP+ GI D+F A +I +LN AY SEI+R +I+S+PKGQW+ Sbjct: 62 MIRGTPLLVQLFLIFYGLPNAGITLDAFPAALIGFSLNVGAYSSEIVRGAILSVPKGQWN 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y++G++ Q IR +I+PQ++ S PL++ FIS++K TS+A+ IT+PE+F AQRIVS Sbjct: 122 AAYSLGMSGAQAIRWVIVPQSVFVSLPPLANTFISLVKDTSLAAVITVPEMFLAAQRIVS 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TY+PLI+Y E A +YL+ ++ +Q ++E +H Sbjct: 182 VTYEPLILYIEAALIYLLFSTVLSKLQTRLEKYYQRH 218 >gi|254712480|ref|ZP_05174291.1| amino acid ABC transporter, permease protein [Brucella ceti M644/93/1] gi|254715553|ref|ZP_05177364.1| amino acid ABC transporter, permease protein [Brucella ceti M13/05/1] Length = 226 Score = 225 bits (574), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 111/222 (50%), Positives = 159/222 (71%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W L+ DS P LL+A ++ T+P+ +SF L +G A++R+F + +S + FYVW Sbjct: 3 DWLQLMADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLF-APVWLSSVARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP IGI D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 62 IFRGTPLLVQLFVIFYGLPSIGIYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y IG++ +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 122 AAYFIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL L+S +Q+++E ++ +++ Sbjct: 182 TTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLE 223 >gi|260564759|ref|ZP_05835244.1| cystine transport system permease [Brucella melitensis bv. 1 str. 16M] gi|265989983|ref|ZP_06102540.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str. Rev.1] gi|265992906|ref|ZP_06105463.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str. Ether] gi|260152402|gb|EEW87495.1| cystine transport system permease [Brucella melitensis bv. 1 str. 16M] gi|262763776|gb|EEZ09808.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str. Ether] gi|263000652|gb|EEZ13342.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str. Rev.1] Length = 250 Score = 225 bits (573), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 110/222 (49%), Positives = 160/222 (72%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W L+ DS P LL+A ++ T+P+ +SF L +G A++R+F + +S + FYVW Sbjct: 27 DWLQLMADSLPTLLWAGLIFTIPLILLSFTFGLALGLLTALVRLF-APVWLSSVARFYVW 85 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP IG+ D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 86 IFRGTPLLVQLFVIFYGLPSIGVYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWE 145 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 146 AAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVA 205 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL L+S +Q+++E ++ +++ Sbjct: 206 TTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLE 247 >gi|261217290|ref|ZP_05931571.1| polar amino acid ABC transporter [Brucella ceti M13/05/1] gi|261320161|ref|ZP_05959358.1| polar amino acid ABC transporter [Brucella ceti M644/93/1] gi|260922379|gb|EEX88947.1| polar amino acid ABC transporter [Brucella ceti M13/05/1] gi|261292851|gb|EEX96347.1| polar amino acid ABC transporter [Brucella ceti M644/93/1] Length = 250 Score = 224 bits (572), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 111/222 (50%), Positives = 159/222 (71%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W L+ DS P LL+A ++ T+P+ +SF L +G A++R+F + +S + FYVW Sbjct: 27 DWLQLMADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLF-APVWLSSVARFYVW 85 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP IGI D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 86 IFRGTPLLVQLFVIFYGLPSIGIYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWE 145 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y IG++ +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 146 AAYFIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVA 205 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL L+S +Q+++E ++ +++ Sbjct: 206 TTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLE 247 >gi|218661166|ref|ZP_03517096.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli IE4771] Length = 203 Score = 224 bits (572), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 106/201 (52%), Positives = 146/201 (72%), Gaps = 1/201 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ +S P LL+A ++ T+P+ +SF LI+G A+ R+F ++ I FYVW Sbjct: 3 HWLQLMAESLPSLLWAGLIFTIPLTLLSFFFGLILGLITAIARLF-GPAPVAAIARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQLFVIFYGLP IGI+ D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 62 VIRGTPLLVQLFVIFYGLPSIGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ + PLS+ FIS++K TS+A+ IT+PE+FQ AQRIV+ Sbjct: 122 AAYSIGMSWRQAMSRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTS 204 TTY+PLI+Y E A +YL+L+S Sbjct: 182 TTYEPLILYIEAALIYLVLSS 202 >gi|117620816|ref|YP_857214.1| L-cystine ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562223|gb|ABK39171.1| L-cystine ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 225 Score = 224 bits (571), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 103/216 (47%), Positives = 152/216 (70%), Gaps = 1/216 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+IDSF LL A ++ T+P+ I+FV+ +++G +A+ R++ ++ L+ FYVW+ Sbjct: 4 WLQLMIDSFWPLLSAGLIFTVPLTLITFVLGIVLGLSVALARLYGPAPLVMLV-RFYVWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP GIV D+F A +I TLN AY SEIIR+++ +IPKGQW+A Sbjct: 63 IRGTPLLVQLFLIFYGLPSAGIVLDAFTAAVIGFTLNIGAYSSEIIRATLAAIPKGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y+IG+ Q + +ILPQ + PLS+ FIS++K TS+A+ +T+PE+FQ AQR+ S Sbjct: 123 AYSIGMNWPQVMWRVILPQAARIAVPPLSNTFISLVKDTSLAAAVTVPELFQAAQRLASV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TY+PLI+Y E A +YL+ +S +Q K+E + Sbjct: 183 TYEPLILYVETALIYLLFSSVLSTLQDKLEQRLAHK 218 >gi|153011130|ref|YP_001372344.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151563018|gb|ABS16515.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 226 Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 106/222 (47%), Positives = 161/222 (72%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W L+++S P LL+A ++ T+P+ +SF L +G A++R+F + +S I FYVW Sbjct: 3 DWLQLMVESLPTLLWAGLIFTIPLTLLSFAFGLTLGLLTALVRLF-APLWLSSIARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP GI D+F A +I +L+ AY SEIIR+ I ++PKGQW+ Sbjct: 62 IFRGTPLLVQLFVIFYGLPSAGIYLDAFPAAVIGFSLSVGAYSSEIIRAVISAVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 122 AAYSIGMSWRQALARTILPQATRTAVPPLSNSFISLVKDTSLAAAITVPELFQSAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL+++S +Q+++E ++ +++ Sbjct: 182 TTYEPLILYIEAALIYLVMSSVLSALQVRLEKRFGRYGGTLE 223 >gi|271498822|ref|YP_003331847.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270342377|gb|ACZ75142.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 221 Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 104/217 (47%), Positives = 155/217 (71%), Gaps = 1/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ DSF LL A + T+P+A +SF++ L+IG +A++R++ T + I FYVW Sbjct: 3 SWLQLMADSFWSLLSAGLTFTVPLAILSFILGLMIGVLVALLRLY-GATPLKKICDFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQLF+IFYGLP GI D+F A +I +LN AY SEI+R +I+S+PKGQW+ Sbjct: 62 MIRGTPLLVQLFLIFYGLPSAGITLDAFPAALIGFSLNVGAYSSEIVRGAILSVPKGQWN 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y++G++ Q IR +I+PQ++ S PL++ FIS++K TS+A+ IT+PE+F AQRIVS Sbjct: 122 AAYSLGMSGAQAIRWVIVPQSVFVSLPPLANTFISLVKDTSLAAVITVPEMFLAAQRIVS 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TY+PLI+Y E A +YL+ ++ +Q ++E +H Sbjct: 182 VTYEPLILYIEAALIYLMFSTVLSKLQTRLEKYYQRH 218 >gi|239834093|ref|ZP_04682421.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239822156|gb|EEQ93725.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 226 Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 160/222 (72%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W L+ +S P LL+A ++ T+P+ +SF L +G A++R+F + +S I FYVW Sbjct: 3 DWLQLMAESLPTLLWAGLIFTIPLTLLSFAFGLTLGLLTALVRLF-APLWLSSIARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP GI D+F A +I TL+ AY SEIIR+ I ++PKGQW+ Sbjct: 62 IFRGTPLLVQLFVIFYGLPSAGIYLDAFPAAVIGFTLSVGAYSSEIIRAVISAVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 122 AAYSIGMSWRQALSRTILPQATRTAVPPLSNSFISLVKDTSLAAAITVPELFQSAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL+++S +Q+++E ++ +++ Sbjct: 182 TTYEPLILYIEAALIYLVMSSVLSALQVRLERRFGRYGGTLE 223 >gi|259909459|ref|YP_002649815.1| Putative amino-acid transport system permease protein [Erwinia pyrifoliae Ep1/96] gi|224965081|emb|CAX56613.1| Putative amino-acid transport system permease protein [Erwinia pyrifoliae Ep1/96] gi|283479532|emb|CAY75448.1| putative ABC transport system, inner membrane component [Erwinia pyrifoliae DSM 12163] Length = 227 Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 104/216 (48%), Positives = 156/216 (72%), Gaps = 1/216 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 WFNL I+SF +LYA + T+P+ I+F + L +G +A++R++ + SL+ FYVW+ Sbjct: 4 WFNLAIESFWPMLYAGLTFTIPLTLIAFTLGLSLGAVVALVRLYGPRPLQSLV-RFYVWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFY LP +GI D+F A +I TLN AY SEIIR++++S+PKGQW+A Sbjct: 63 IRGTPLLVQLFLIFYALPGVGITIDAFPAAVIGFTLNIGAYTSEIIRATLLSVPKGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +++IG++ QT+R I++PQ + PLS+ FI+++K TS+AS IT+PE+F AQRI + Sbjct: 123 AHSIGMSWGQTLRRIVMPQAARVAVPPLSNTFIALVKDTSLASVITVPELFLAAQRIAAV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TYQPLI+Y E A +YL+L+S +Q ++E + + Sbjct: 183 TYQPLILYTEAAIIYLLLSSVLSALQARLEKKLANN 218 >gi|251791414|ref|YP_003006135.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247540035|gb|ACT08656.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 221 Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 102/218 (46%), Positives = 154/218 (70%), Gaps = 1/218 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ DSF LL A + T+P+A +SF + L++G +A++R++ + I FYVW Sbjct: 3 SWLQLMADSFWSLLSAGLTFTVPLAILSFALGLMLGVLVALLRLY-GPKPLKKICDFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQLF+IFYGLP+ GI D+F A +I +LN AY SEI+R +I+S+PKGQW+ Sbjct: 62 VIRGTPLLVQLFLIFYGLPNAGITLDAFPAALIGFSLNVGAYSSEIVRGAILSVPKGQWN 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y++G++ Q IR +I+PQ++ S PL++ FIS++K TS+A+ IT+PE+F AQRIVS Sbjct: 122 AAYSLGMSGAQAIRWVIVPQSVFVSLPPLANTFISLVKDTSLAAVITVPEMFLAAQRIVS 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TY+PL +Y E A +YL+ ++ +Q ++E +HT Sbjct: 182 VTYEPLFLYIEAALIYLMFSTVLSKLQARLEKYYQRHT 219 >gi|209551407|ref|YP_002283324.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537163|gb|ACI57098.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 226 Score = 222 bits (565), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 108/217 (49%), Positives = 154/217 (70%), Gaps = 1/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ +S P LL+A ++ T+P+ +SF LI+G A+ R+F + + I FYVW Sbjct: 3 HWLQLMAESLPSLLWAGLIFTIPLTLLSFAFGLILGLITAIARLFGPGPVAA-IARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQLFVIFYGLP IGI+ D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 62 VIRGTPLLVQLFVIFYGLPSIGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ + PLS+ FIS++K TS+A+ IT+PE+FQ AQRIV+ Sbjct: 122 AAYSIGMSWRQAMSRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TTY+PLI+Y E A +YL+L+S +Q+++E ++ Sbjct: 182 TTYEPLILYIEAALLYLVLSSVLSQLQVRLERRFARY 218 >gi|310766634|gb|ADP11584.1| Putative amino-acid transport system permease protein [Erwinia sp. Ejp617] Length = 227 Score = 222 bits (565), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 104/216 (48%), Positives = 156/216 (72%), Gaps = 1/216 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 WFNL I+SF +LYA + T+P+ I+F + L +G +A++R++ + SL+ FYVW+ Sbjct: 4 WFNLAIESFWPMLYAGLTFTIPLTLIAFTLGLSLGAVVALVRLYGPRPLQSLV-RFYVWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFY LP +GI D+F A +I TLN AY SEIIR++++S+PKGQW+A Sbjct: 63 IRGTPLLVQLFLIFYALPGVGITIDAFPAAVIGFTLNIGAYTSEIIRATLLSVPKGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +++IG++ QT+R I++PQ + PLS+ FI+++K TS+AS IT+PE+F AQRI + Sbjct: 123 AHSIGMSWSQTLRRIVMPQAARVAVPPLSNTFIALVKDTSLASVITVPELFLAAQRIAAV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TYQPLI+Y E A +YL+L+S +Q ++E + + Sbjct: 183 TYQPLILYTEAAIIYLLLSSVLSALQARLEKRLANN 218 >gi|222102584|ref|YP_002539623.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221739185|gb|ACM39918.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 219 Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 106/212 (50%), Positives = 150/212 (70%), Gaps = 1/212 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++DS LL+A +V T+P+ +SF L +G A+ R+F + + + I FYVW+ RGT Sbjct: 1 MVDSLVPLLWAGLVFTIPLTILSFTFGLTLGLVTAIGRLFGAKPVAA-IARFYVWVIRGT 59 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLLVQLFVIFYGLP IGI+ D+F A +I TLN AY SEIIR+ I S+PKGQW+A+Y+I Sbjct: 60 PLLVQLFVIFYGLPSIGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSI 119 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G++ +Q + ILPQ + PLS+ FIS++K TS+A+ IT+PE+FQ AQRIV+TTY+P Sbjct: 120 GMSWRQAMLRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATTYEP 179 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 LI+Y E A +YL L S +Q+++E ++ Sbjct: 180 LILYIEAALIYLALCSVLSTVQVRLERRFARY 211 >gi|218682497|ref|ZP_03530098.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli CIAT 894] Length = 226 Score = 221 bits (564), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 107/217 (49%), Positives = 154/217 (70%), Gaps = 1/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ +S P LL+A ++ T+P+ +SF L++G A+ R+F ++ I FYVW Sbjct: 3 HWLQLMAESLPSLLWAGLIFTIPLTLLSFAFGLVLGLITAIARLF-GPAPVAAIARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQLFVIFYGLP IGI+ D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 62 VIRGTPLLVQLFVIFYGLPSIGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ + PLS+ FIS++K TS+A+ IT+PE+FQ AQRIV+ Sbjct: 122 AAYSIGMSWRQAMSRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TTY+PLI+Y E A +YL+L+S +Q+++E ++ Sbjct: 182 TTYEPLILYIEAALLYLVLSSVLSQLQVRLERRFARY 218 >gi|227327917|ref|ZP_03831941.1| putative amino-acid transport system permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 221 Score = 221 bits (563), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 103/216 (47%), Positives = 153/216 (70%), Gaps = 1/216 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+ DSF LL A + T+P+A +SF+ L +G IA++R++ + + FYVW+ Sbjct: 4 WLQLMADSFWSLLSAGLKFTVPLAILSFIFGLALGIIIALVRLY-GPKPLKWVGDFYVWV 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP GI D+F A +I T++ AY SEI+R +I+S+PKGQW+A Sbjct: 63 IRGTPLLVQLFLIFYGLPSAGITLDAFPAALIGFTISVGAYSSEIVRGAILSVPKGQWNA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++G+ +Q IR +I PQ++ S PLS+ FIS++K TS+A+ IT+PE+F +AQRIVS Sbjct: 123 AYSLGMNGRQAIRWVIFPQSVFVSLPPLSNTFISLIKDTSLAAVITVPEMFLSAQRIVSV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TY+PLI+Y E A +YL+ ++ +Q+K+E +H Sbjct: 183 TYEPLILYVEAALIYLMFSTVLSQLQVKLEKYYQRH 218 >gi|188534833|ref|YP_001908630.1| Putative amino-acid transport system permease protein [Erwinia tasmaniensis Et1/99] gi|188029875|emb|CAO97759.1| Putative amino-acid transport system permease protein [Erwinia tasmaniensis Et1/99] Length = 227 Score = 221 bits (562), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 104/216 (48%), Positives = 155/216 (71%), Gaps = 1/216 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 WFNL ++SF +LYA + T+P+ I+F + L +G +A+ R++ + SL+ FYVW+ Sbjct: 4 WFNLAVESFWPMLYAGLTFTIPLTLIAFTLGLSLGAVVALARLYGPRPLQSLV-RFYVWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFY LP +GI D+F A +I TLN AY SEIIR++++S+PKGQW+A Sbjct: 63 IRGTPLLVQLFLIFYALPGVGITIDAFPAAVIGFTLNIGAYTSEIIRATLLSVPKGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +++IG++ QT+R II+PQ + PLS+ FI+++K TS+AS IT+PE+F AQRI + Sbjct: 123 AHSIGMSWSQTLRRIIMPQAARVAVPPLSNTFIALVKDTSLASVITVPELFLAAQRIAAV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TYQPLI+Y E A +YL+L+S +Q ++E + + Sbjct: 183 TYQPLILYTEAAIIYLLLSSVLSALQARLEKKLANN 218 >gi|227114002|ref|ZP_03827658.1| putative amino-acid transport system permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|253686636|ref|YP_003015826.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753214|gb|ACT11290.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 221 Score = 221 bits (562), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 103/216 (47%), Positives = 153/216 (70%), Gaps = 1/216 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+ DSF LL A + T+P+A +SF+ L +G IA++R++ + + FYVW+ Sbjct: 4 WLQLMADSFWSLLSAGLKFTVPLAILSFIFGLALGIIIALVRLY-GPKPLKWLGDFYVWV 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP GI D+F A +I T++ AY SEI+R +I+S+PKGQW+A Sbjct: 63 IRGTPLLVQLFLIFYGLPSAGITLDAFPAALIGFTISVGAYSSEIVRGAILSVPKGQWNA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++G+ +Q IR +I PQ++ S PLS+ FIS++K TS+A+ IT+PE+F +AQRIVS Sbjct: 123 AYSLGMNGRQAIRWVIFPQSVFVSLPPLSNTFISLIKDTSLAAVITVPEMFLSAQRIVSV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TY+PLI+Y E A +YL+ ++ +Q+K+E +H Sbjct: 183 TYEPLILYVEAALIYLMFSTVLSQLQVKLEKYYQRH 218 >gi|85058513|ref|YP_454215.1| amino-acid ABC transporter permease component [Sodalis glossinidius str. 'morsitans'] gi|84779033|dbj|BAE73810.1| amino-acid ABC transporter permease component [Sodalis glossinidius str. 'morsitans'] Length = 219 Score = 221 bits (562), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 103/210 (49%), Positives = 151/210 (71%), Gaps = 1/210 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+ DSF +L A ++ TLP+A +SFV L++GF +A++R++ + I FYVW+ Sbjct: 4 WLQLMYDSFWRLFTAGLMFTLPLALLSFVGGLVLGFLVALVRLYGPQPLKG-IADFYVWV 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP G+ D+F A +I TL+ AY SEIIR +I+S+PK QW+A Sbjct: 63 IRGTPLLVQLFLIFYGLPSAGVTLDAFPAALIGFTLSVGAYGSEIIRGAIVSVPKAQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++AIG+ Q +R +ILPQ++ S PL++ FIS++K TS+A+ IT+PE+F AQRIVS Sbjct: 123 AWAIGMNSTQAMRRVILPQSVFVSIPPLANSFISLIKDTSLAAVITVPEMFLAAQRIVSV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TY+PLI+Y E A +YL+ ++ +Q ++E Sbjct: 183 TYEPLILYIEAAAIYLLFSTVLSKVQNRLE 212 >gi|163844812|ref|YP_001622467.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis ATCC 23445] gi|163675535|gb|ABY39645.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445] Length = 226 Score = 220 bits (561), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 111/222 (50%), Positives = 160/222 (72%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W L+ DS P LL+A ++ T+P+ +SF L +G A++R+F + +S + FYVW Sbjct: 3 DWLQLMADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLF-APVWLSSVARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP IGI D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 62 IFRGTPLLVQLFVIFYGLPSIGIYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+ Sbjct: 122 AAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL L+S +Q+++E ++ +++ Sbjct: 182 TTYEPLILYIEAALIYLALSSILLALQVRLERRFGRYGGTLE 223 >gi|265985359|ref|ZP_06098094.1| polar amino acid ABC transporter [Brucella sp. 83/13] gi|306845793|ref|ZP_07478361.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] gi|264663951|gb|EEZ34212.1| polar amino acid ABC transporter [Brucella sp. 83/13] gi|306273685|gb|EFM55523.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] Length = 219 Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 109/215 (50%), Positives = 156/215 (72%), Gaps = 1/215 (0%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 DS P LL+A ++ T+P+ +SF L +G A++R+F + +S + FYVWIFRGTPL Sbjct: 3 DSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLF-APVWLSSVARFYVWIFRGTPL 61 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LVQLFVIFYGLP IGI D+F A +I TLN AY SEIIR+ I S+PKGQW+A+Y+IG+ Sbjct: 62 LVQLFVIFYGLPSIGIYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGM 121 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + +Q + ILPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+TTY+PLI Sbjct: 122 SWRQALIRTILPQATRTAVPPLSNTFISLVKDTSLAAAITVPELFQSAQRIVATTYEPLI 181 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +Y E A +YL L+S +Q+++E ++ +++ Sbjct: 182 LYIEAALIYLALSSILSALQVRLERRFGRYGGTLE 216 >gi|261819590|ref|YP_003257696.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261603603|gb|ACX86089.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 221 Score = 220 bits (560), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 103/216 (47%), Positives = 152/216 (70%), Gaps = 1/216 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+ DSF LL A + T+P+A +SF+ L +G IA++R++ + + FYVW+ Sbjct: 4 WLQLMADSFWSLLSAGLKFTVPLAILSFIFGLALGILIALVRLY-GPKPLKWLGDFYVWV 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP GI D+F A +I T++ AY SEI+R +I+S+PKGQW A Sbjct: 63 IRGTPLLVQLFLIFYGLPSAGITLDAFPAALIGFTVSVGAYSSEIVRGAILSVPKGQWSA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++G+ +Q IR +I PQ++ S PLS+ FIS++K TS+A+ IT+PE+F +AQRIVS Sbjct: 123 AYSLGMNGRQAIRWVIFPQSVFVSLPPLSNTFISLIKDTSLAAVITVPEMFLSAQRIVSV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TY+PLI+Y E A +YL+ ++ +Q+K+E +H Sbjct: 183 TYEPLILYVEAALIYLMFSTVLSQLQVKLEKYYQRH 218 >gi|170751306|ref|YP_001757566.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium radiotolerans JCM 2831] gi|170657828|gb|ACB26883.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium radiotolerans JCM 2831] Length = 226 Score = 220 bits (560), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 103/217 (47%), Positives = 150/217 (69%), Gaps = 1/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W +L++ S LL A + T+P+ I+F + L +G A++R+F + +L YVW Sbjct: 3 HWLDLMLQSLGPLLAAGLRFTVPLTLIAFALGLALGLGTALVRLFAPRPLAAL-AWLYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPLLVQLFVIFYGLP GI+ D+F A +I TLN AY SEI+R++I SIPKGQW+ Sbjct: 62 IFRGTPLLVQLFVIFYGLPSTGILIDAFPAAVIGFTLNVGAYTSEIVRAAIASIPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+YA G+T Q +R ILPQ + L++ FI+++K TS+A+ IT+PE+FQ AQRIV+ Sbjct: 122 AAYATGMTPVQALRRTILPQAARVAVPSLANSFIALVKDTSLAAAITVPELFQAAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TY+PLI+Y E+A +YL+L++ +Q +E + ++ Sbjct: 182 VTYEPLILYIEVALIYLVLSTLLSWLQTLLERRLGRY 218 >gi|50119206|ref|YP_048373.1| putative amino acid transport system permease [Pectobacterium atrosepticum SCRI1043] gi|49609732|emb|CAG73166.1| putative amino-acid transport system permease protein [Pectobacterium atrosepticum SCRI1043] Length = 221 Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 103/216 (47%), Positives = 151/216 (69%), Gaps = 1/216 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+ DSF LL A + T+P+A +SF+ L +G IA++R++ + + FYVW+ Sbjct: 4 WLQLMADSFWSLLSAGLKFTVPLAILSFIFGLALGILIALVRLY-GPKPLKWLGDFYVWV 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP GI D+F A +I T++ AY SEI+R +I+S+PKGQW A Sbjct: 63 IRGTPLLVQLFLIFYGLPSAGITLDAFPAALIGFTVSVGAYSSEIVRGAILSVPKGQWSA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++G+ +Q IR +I PQ++ S PLS+ FIS++K TS+A+ IT+PE+F +AQRIVS Sbjct: 123 AYSLGMNGRQAIRWVIFPQSVFVSLPPLSNTFISLIKDTSLAAVITVPEMFLSAQRIVSV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TY+PLI+Y E A +YL+ ++ +Q K+E +H Sbjct: 183 TYEPLILYVEAALIYLMFSTVLSQLQAKLEKYYQRH 218 >gi|209518796|ref|ZP_03267610.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209500766|gb|EEA00808.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 226 Score = 219 bits (557), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 102/217 (47%), Positives = 149/217 (68%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +L+ S LLYA +V T+P+ SF + L + A++R+F ++ ++ FYVW+ Sbjct: 4 WLHLMAQSLGPLLYAGLVFTVPLTLASFGVGLTLALAAALVRLFGPRWAVA-VVRFYVWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RG+PLLVQLFVIFYGLP++GIV D A I +LN AY SE+IR I SIPKGQW+A Sbjct: 63 IRGSPLLVQLFVIFYGLPNVGIVLDPLTAATIGFSLNVGAYNSEVIRGVIESIPKGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++G+TR + +R +ILPQ + PLS+ FIS++K TS+A+ +T+PE+FQ AQRI S Sbjct: 123 AYSMGMTRAEALRRVILPQAARVALPPLSNSFISLVKDTSLAAVLTVPEVFQAAQRIASV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TY+PLI+Y + A VYL+ +S +Q+++E +H Sbjct: 183 TYEPLILYTQAALVYLLFSSVLSSVQVRLEQRFGRHA 219 >gi|206558855|ref|YP_002229615.1| putative amino acid ABC transporter permease [Burkholderia cenocepacia J2315] gi|198034892|emb|CAR50764.1| putative amino acid ABC transporter permease protein [Burkholderia cenocepacia J2315] Length = 226 Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 100/217 (46%), Positives = 147/217 (67%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +L+ +S LL A +V T+P+ SF I L++ F A+ R+F ++ FY+W+ Sbjct: 4 WLHLMAESLRPLLVAGLVFTVPLTLASFAIGLLLAFGAALTRLF-GPRWAQAVVRFYIWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRG+PLLVQLFVIFYGLP++GIV D A +I +LN AY +E+IR I S+PKGQW+A Sbjct: 63 FRGSPLLVQLFVIFYGLPNVGIVLDPLTAAVIGFSLNVGAYNAEVIRGVIESMPKGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++ +TR Q +R ILPQ + LS+ FIS++K TS+A+ +T+PEIFQ AQRI + Sbjct: 123 AYSMSMTRAQALRRAILPQAARVALPALSNSFISLVKDTSLAAVLTVPEIFQAAQRIAAV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TY+PLI+Y E A +YL+ +S +Q ++E+ +H Sbjct: 183 TYEPLILYTEAALIYLLFSSVLSTLQRRLETRFGRHA 219 >gi|292487229|ref|YP_003530101.1| putative ABC transporter inner membrane protein [Erwinia amylovora CFBP1430] gi|292900396|ref|YP_003539765.1| ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291200244|emb|CBJ47372.1| ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291552648|emb|CBA19693.1| putative ABC transport system, inner membrane component [Erwinia amylovora CFBP1430] gi|312171330|emb|CBX79589.1| putative ABC transport system, inner membrane component [Erwinia amylovora ATCC BAA-2158] Length = 227 Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 104/217 (47%), Positives = 154/217 (70%), Gaps = 1/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W NL IDSF +LYA + T+P+ I+F + L +G +A+ R++ + +L+ FYVW Sbjct: 3 SWINLAIDSFWPMLYAGLTFTIPLTLIAFTLGLSLGIVVALARLYGPRPLQNLV-RFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQLF+IFY LP +GI D+F A +I TLN AY SEIIR++++S+PKGQW+ Sbjct: 62 LIRGTPLLVQLFLIFYALPGVGITIDAFPAAVIGFTLNIGAYTSEIIRATLLSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+++IG++ QT+R II+PQ + PLS+ FI+++K TS+AS IT+PE+F AQRI + Sbjct: 122 AAHSIGMSWGQTLRRIIMPQAARVAVPPLSNTFIALVKDTSLASVITVPELFLAAQRIAA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TYQPLI+Y E A +YL+L+S +Q ++E + + Sbjct: 182 VTYQPLILYTEAAIIYLLLSSVLSALQARLEKKLAYN 218 >gi|222087756|ref|YP_002546293.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725204|gb|ACM28360.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 226 Score = 218 bits (554), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 156/222 (70%), Gaps = 1/222 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ +S LL+A +V T+P+ I+FV+ L++G AV R+F +++ + FYVW Sbjct: 3 HWLQLMWESLGTLLWAGLVFTIPLTLITFVLGLLLGLVTAVTRLFGPKPLVA-VARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQLFVIFYGLP +GI+ D+F A +I TLN AY SEIIR+ I S+PKGQW+ Sbjct: 62 VIRGTPLLVQLFVIFYGLPSMGILLDAFPAAVIGFTLNVGAYSSEIIRAVISSVPKGQWE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG+ +Q + ILPQ + PLS+ FIS++K TS+A+ IT+PE+FQ AQRIV+ Sbjct: 122 AAYSIGMNWRQAMSRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TTY+PLI+Y E A +YL+L++F +Q +E + +++ Sbjct: 182 TTYEPLILYIEAAIIYLVLSTFLSTLQGYLERRFARSGGTLE 223 >gi|290473509|ref|YP_003466378.1| putative amino acid ABC transporter membrane protein [Xenorhabdus bovienii SS-2004] gi|289172811|emb|CBJ79582.1| putative amino acid transport protein (ABC superfamily, membrane) [Xenorhabdus bovienii SS-2004] Length = 250 Score = 218 bits (554), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 104/220 (47%), Positives = 159/220 (72%), Gaps = 1/220 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M W +L +DS +LYA + T+P+ I+F + + +GF +A+IR++ S +++ ++ F Sbjct: 16 MTPSWLSLALDSLWPMLYAGLTFTIPLTLITFALGISLGFIVALIRLYGSKPLVA-VVRF 74 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YVW+ RGTPLLVQLF+IFY LP +GI ++F + +I TLN AY SE+IR+++IS+PKG Sbjct: 75 YVWLIRGTPLLVQLFLIFYALPSVGITLEAFTSAVIGFTLNVGAYTSEVIRAALISVPKG 134 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+AS++IG++ Q++R I+LPQ S PLS+ FIS++K TS+AS IT+PE+F AQR Sbjct: 135 QWEASHSIGMSWWQSLRRIVLPQAARVSIPPLSNTFISLVKDTSLASVITVPEMFLAAQR 194 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I + TYQPLI+Y E A +YL+L+S +Q+++E +Q Sbjct: 195 IAAVTYQPLILYTEAAILYLLLSSVLSALQVRLEKKFSQQ 234 >gi|90419716|ref|ZP_01227625.1| permease protein, ABC-type amino acid transporter [Aurantimonas manganoxydans SI85-9A1] gi|90335757|gb|EAS49505.1| permease protein, ABC-type amino acid transporter [Aurantimonas manganoxydans SI85-9A1] Length = 226 Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 108/215 (50%), Positives = 154/215 (71%), Gaps = 1/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 L++DS L+ A +V T+P+A +SF L +GF AV+R+F ++ I FYVW Sbjct: 5 LQLMLDSLWPLVRAGLVFTVPLAILSFAFGLSLGFMTAVVRLF-GPKPLAAIARFYVWFI 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLFVIFYGLP +GI+ D+F A +I TL+ AY SEIIR+++ SI KGQW+A+ Sbjct: 64 RGTPLLVQLFVIFYGLPSVGILIDAFPAALIGFTLSVGAYTSEIIRAALSSINKGQWEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 YAIG+TR Q ++ I+PQ + + PLS+ FIS++K TS+A+ IT+PE+FQ AQRIV+TT Sbjct: 124 YAIGMTRNQAMKRTIVPQAVRVAVPPLSNSFISLVKDTSLAAAITVPELFQQAQRIVATT 183 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y+PLI+Y E A +YL+L+S +Q ++E+ + Sbjct: 184 YEPLILYVEAALLYLVLSSVLSALQSRLEARFGRQ 218 >gi|269138890|ref|YP_003295591.1| amino-acid ABC transporter permease component [Edwardsiella tarda EIB202] gi|267984551|gb|ACY84380.1| amino-acid ABC transporter permease component [Edwardsiella tarda EIB202] gi|304558876|gb|ADM41540.1| amino-acid ABC transporter permease component [Edwardsiella tarda FL6-60] Length = 233 Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 101/211 (47%), Positives = 151/211 (71%), Gaps = 1/211 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W ++D+F LL AA+ ++P+A +SF L++G A+IR++ + + + FYVW Sbjct: 17 DWLQPVVDAFWPLLSAALRFSIPLALLSFCGGLLMGLTTALIRLY-AIRPLKICADFYVW 75 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 +FRGTPLLVQLF+IFYGLP GI D+F A +I TLN AY SEI+R +I+S+P+GQW+ Sbjct: 76 VFRGTPLLVQLFLIFYGLPSAGITLDAFPAALIGFTLNVGAYSSEIVRGAILSVPRGQWE 135 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ AIG++ Q +R +ILPQ++ S PLS+ FIS++K TS+A+ IT+PE+F AQRIV+ Sbjct: 136 AASAIGMSSAQAMRRVILPQSVFVSLPPLSNAFISLIKDTSLAAVITVPEMFLAAQRIVA 195 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Y+PLIIY E A +YL ++ +Q+++E Sbjct: 196 VNYEPLIIYSETALIYLAFSTLLGKLQLRLE 226 >gi|300721603|ref|YP_003710878.1| putative amino acid ABC transporter membrane protein [Xenorhabdus nematophila ATCC 19061] gi|297628095|emb|CBJ88646.1| putative amino acid transport protein (ABC superfamily, membrane) [Xenorhabdus nematophila ATCC 19061] Length = 238 Score = 215 bits (548), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 107/229 (46%), Positives = 161/229 (70%), Gaps = 4/229 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M W +L +DS +LYA + T+P+ I+F + + +GF +A+IR++ +I+ ++ F Sbjct: 1 MTPSWLSLALDSLWPMLYAGLTFTIPLTLITFALGISLGFIVALIRLYGPKPLIA-VVRF 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YVW+ RGTPLLVQLF+IFY LP +GI ++F + +I TLN AY SE+IR+++IS+PKG Sbjct: 60 YVWLIRGTPLLVQLFLIFYALPSVGITLEAFTSAVIGFTLNVGAYTSEVIRAALISVPKG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+AS++IG++ Q++R I+LPQ S PLS+ FIS++K TS+AS IT+PE+F AQR Sbjct: 120 QWEASHSIGMSWWQSLRRIVLPQAARFSIPPLSNTFISLVKDTSLASVITVPEMFLAAQR 179 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ---HTYSVDK 226 I + TYQPLI+Y E A +YL+L+S +Q+++E Q H S +K Sbjct: 180 IAAVTYQPLILYTEAAILYLLLSSVLSALQVRLEKKFAQQNSHQQSSNK 228 >gi|94676741|ref|YP_588663.1| amino acid ABC transporter, permease protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219891|gb|ABF14050.1| amino acid ABC transporter, permease protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 218 Score = 215 bits (548), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 109/211 (51%), Positives = 148/211 (70%), Gaps = 1/211 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W LI DSF +L A + TLP+A +SF I LI+G + +IR++ S + LI +FYVW+ Sbjct: 4 WLQLIHDSFWRLFIAGLYFTLPLALLSFFIGLILGLLVTLIRLY-SSRYLQLIANFYVWV 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP GI D+F A +I TLN AY SEIIR +I+S+P QW+A Sbjct: 63 IRGTPLLVQLFLIFYGLPSAGITLDAFPAALIGFTLNIGAYSSEIIRGAILSVPLTQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++AIG+ Q + +ILPQ I + PL++ FIS++K TS+A+ IT+PEIF AQRIVS Sbjct: 123 AWAIGMNSTQAMIRVILPQAIFVALPPLANSFISLIKDTSLAAVITVPEIFLAAQRIVSV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 TY+PLI+Y E A +YL+ ++ Q K+ES Sbjct: 183 TYEPLILYIEAAAIYLLYSTVLGKWQTKLES 213 >gi|34498437|ref|NP_902652.1| amino-acid transport system permease ABC transporter protein [Chromobacterium violaceum ATCC 12472] gi|34104291|gb|AAQ60650.1| probable amino-acid transport system permease ABC transporter protein [Chromobacterium violaceum ATCC 12472] Length = 226 Score = 215 bits (547), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 101/221 (45%), Positives = 153/221 (69%), Gaps = 1/221 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+ DS P LLYA +V T+P+ +SF L +G +A+IR+F ++ L++ Y W+ Sbjct: 4 WLQLMADSLPSLLYAGLVFTVPLTLLSFAGGLALGLLVALIRLFGPRPLV-LLVRGYSWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLFVIFYGLP +GIVFD F A ++ L+ AY SE+IR++I S+P+ QW+A Sbjct: 63 VRGTPLLVQLFVIFYGLPRVGIVFDPFPAALLGFVLSVGAYTSEVIRAAISSVPRAQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++G++ Q +R ILPQ + PL++ FIS++K TS+A+ +T+PE+FQ AQRI +T Sbjct: 123 AYSLGMSWSQAMRRTILPQAGRVAVPPLANSFISLVKDTSLAAVLTVPEMFQAAQRIAAT 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TY+PL++Y E A +YL+L++ +Q ++E +H V Sbjct: 183 TYEPLLLYLETALIYLLLSTVLTWLQERLEKRFDRHVAPVG 223 >gi|238919597|ref|YP_002933112.1| L-cystine transport system permease protein TcyB [Edwardsiella ictaluri 93-146] gi|238869166|gb|ACR68877.1| L-cystine transport system permease protein TcyB [Edwardsiella ictaluri 93-146] Length = 232 Score = 214 bits (546), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 102/211 (48%), Positives = 149/211 (70%), Gaps = 1/211 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W + D+F LL AA+ +LP+A +SF L++G A+IR++ + + L FY+W Sbjct: 16 DWLQPVADAFWPLLSAALRFSLPLALLSFCGGLLVGLATALIRLY-AIRPLRLCADFYIW 74 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 +FRGTPLLVQLF+IFYGLP GI D+F A +I TLN AY SEI+R +I+S+P+GQW+ Sbjct: 75 VFRGTPLLVQLFLIFYGLPSAGITLDAFPAALIGFTLNVGAYSSEIVRGAILSVPQGQWE 134 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ AIG++ Q +R +ILPQ+ S PLS+ FIS++K TS+A+ IT+PE+F AQRIV+ Sbjct: 135 AASAIGMSSSQAMRRVILPQSAFVSLPPLSNVFISLIKDTSLAAVITVPEMFLAAQRIVA 194 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Y+PLIIY E A +YL ++ +Q+++E Sbjct: 195 VNYEPLIIYSETALIYLAFSTLLGKLQLRLE 225 >gi|253574193|ref|ZP_04851535.1| amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251846670|gb|EES74676.1| amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 222 Score = 214 bits (545), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 104/221 (47%), Positives = 154/221 (69%), Gaps = 1/221 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +N+I+DSF LL A + T+P+ I+F + L++ A+ R+ S + L+ F Sbjct: 1 MDERIWNIIVDSFFPLLKAGVAFTVPLTLITFALGLLVAVLTALARLS-SFGPLRLLARF 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YVWI RGTPLL+QLF+IFYGLP IGIV D F A +I TL+ AY SEI+R++I+SI +G Sbjct: 60 YVWIIRGTPLLLQLFIIFYGLPSIGIVLDPFPAAVIGFTLSVGAYGSEIVRAAILSIHEG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+Y++G+TR Q +R IILPQ S PL++ FIS++K TS+A+T+T E+F+TAQ+ Sbjct: 120 QWEAAYSLGMTRLQALRRIILPQAARVSVPPLANSFISLVKDTSLAATVTYTEMFRTAQQ 179 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 I STTY+PL++Y E +YLI ++ +Q ++E + + T Sbjct: 180 ITSTTYEPLVVYSEAGLIYLIFSTILSALQNRLEKRLGRFT 220 >gi|89100885|ref|ZP_01173735.1| Amino acid ABC-type transporter, permease component [Bacillus sp. NRRL B-14911] gi|89084421|gb|EAR63572.1| Amino acid ABC-type transporter, permease component [Bacillus sp. NRRL B-14911] Length = 226 Score = 214 bits (545), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 102/209 (48%), Positives = 150/209 (71%), Gaps = 1/209 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++ DSF +L A I T+P+ I+F + LI+ FF+A+ R+ +++L FYVWIFR Sbjct: 11 GILADSFFPILKAGIYFTIPLTLITFALGLILAFFVALARLSSIKPLVAL-ARFYVWIFR 69 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+F++F+GLP +GI D F A +I+ TLN AY SEIIR++I+SIPKGQW+A+ Sbjct: 70 GTPLLVQIFILFFGLPSVGITLDPFPAAVIAFTLNKGAYSSEIIRAAILSIPKGQWEAAS 129 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+TR Q +R II+PQ + S PL + FIS++K TS+A+TIT+ E+FQ Q+I + TY Sbjct: 130 SVGMTRSQAMRRIIVPQAVRVSLPPLGNSFISLVKDTSLAATITVTEMFQKGQQIAAATY 189 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIES 215 +PL +Y E+AF+YLI ++ Q K+E Sbjct: 190 EPLWLYIEVAFIYLIFSTVLSYFQNKLED 218 >gi|116691157|ref|YP_836780.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|116649246|gb|ABK09887.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 226 Score = 211 bits (538), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 100/217 (46%), Positives = 146/217 (67%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +L+ +S LL A +V T+P+ SF I L++ F A+ R+F ++ FY+W+ Sbjct: 4 WLHLMAESLRPLLVAGLVFTVPLTLASFAIGLLLAFGAALTRLF-GPRWAQAVVRFYIWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRG+PLLVQLFVIFYGLP++GIV D A +I +LN AY +E+IR I S+PKGQW+A Sbjct: 63 FRGSPLLVQLFVIFYGLPNVGIVLDPLTAAVIGFSLNVGAYNAEVIRGVIESMPKGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++ +TR Q +R ILPQ + LS+ FIS++K TS+A+ +T+PEIFQ AQRI + Sbjct: 123 AYSMSMTRAQALRRAILPQAARVALSALSNSFISLVKDTSLAAVLTVPEIFQAAQRIAAV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TY+PLI+Y E A +YL+ +S +Q ++E +H Sbjct: 183 TYEPLILYTEAALIYLLFSSVLSSLQRRLELRFGRHA 219 >gi|107024071|ref|YP_622398.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|105894260|gb|ABF77425.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia cenocepacia AU 1054] Length = 226 Score = 211 bits (538), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 100/217 (46%), Positives = 146/217 (67%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +L+ +S LL A +V T+P+ SF I L++ F A+ R+F ++ FY+W+ Sbjct: 4 WLHLMAESLRPLLVAGLVFTVPLTLASFAIGLLLAFGAALTRLF-GPRWAQAVVRFYIWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRG+PLLVQLFVIFYGLP++GIV D A +I +LN AY +E+IR I S+PKGQW+A Sbjct: 63 FRGSPLLVQLFVIFYGLPNVGIVLDPLTAAVIGFSLNVGAYNAEVIRGVIESMPKGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++ +TR Q +R ILPQ + LS+ FIS++K TS+A+ +T+PEIFQ AQRI + Sbjct: 123 AYSMSMTRAQALRRAILPQAARVALPALSNSFISLVKDTSLAAVLTVPEIFQAAQRIAAV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TY+PLI+Y E A +YL+ +S +Q ++E +H Sbjct: 183 TYEPLILYTEAALIYLLFSSVLSSLQRRLELRFGRHA 219 >gi|170734488|ref|YP_001766435.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169817730|gb|ACA92313.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 226 Score = 211 bits (537), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 100/217 (46%), Positives = 146/217 (67%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +L+ +S LL A +V T+P+ SF I L++ F A+ R+F ++ FY+W+ Sbjct: 4 WLHLMAESLRPLLVAGLVFTVPLTLASFAIGLLLAFGTALTRLF-GPRWAQAVVRFYIWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRG+PLLVQLFVIFYGLP++GIV D A +I +LN AY +E+IR I S+PKGQW+A Sbjct: 63 FRGSPLLVQLFVIFYGLPNVGIVLDPLTAAVIGFSLNVGAYNAEVIRGVIESMPKGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++ +TR Q +R ILPQ + LS+ FIS++K TS+A+ +T+PEIFQ AQRI + Sbjct: 123 AYSMSMTRAQALRRAILPQAARVALPALSNSFISLVKDTSLAAVLTVPEIFQAAQRIAAV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TY+PLI+Y E A +YL+ +S +Q ++E +H Sbjct: 183 TYEPLILYTEAALIYLLFSSVLSSLQRRLELRFGRHA 219 >gi|306840653|ref|ZP_07473405.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] gi|306289391|gb|EFM60627.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] Length = 207 Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 103/205 (50%), Positives = 149/205 (72%), Gaps = 1/205 (0%) Query: 21 IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG 80 ++ T+P+ +SF L +G A++R+F + +S + FYVWIFRGTPLLVQLFVIFYG Sbjct: 1 MIFTIPLTLLSFTFGLALGLLTALVRLF-APVWLSSVARFYVWIFRGTPLLVQLFVIFYG 59 Query: 81 LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 LP IGI D+F A +I TLN AY SEIIR+ I S+PKGQW+A+Y+IG++ +Q + I Sbjct: 60 LPSIGIYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTI 119 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LPQ T+ PLS+ FIS++K TS+A+ IT+PE+FQ+AQRIV+TTY+PLI+Y E A +YL Sbjct: 120 LPQATRTAVPPLSNTFISLVKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYL 179 Query: 201 ILTSFCYIIQIKIESSVTQHTYSVD 225 L+S +Q+++E ++ +++ Sbjct: 180 ALSSILSALQVRLERRFGRYGGTLE 204 >gi|78067959|ref|YP_370728.1| amino acid ABC transporter inner membrane protein [Burkholderia sp. 383] gi|77968704|gb|ABB10084.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia sp. 383] Length = 226 Score = 204 bits (520), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 101/217 (46%), Positives = 145/217 (66%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +L+ +S LL A +V T+P+ SF I L++ F A+ R+F + FY+W+ Sbjct: 4 WLHLMAESLRPLLVAGLVFTVPLTLASFAIGLLLAFGAALTRLF-GPRWAQAAVRFYIWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRG+PLLVQLFVIFYGLP +GIV D A +I +LN AY +E+IR I SIPKGQW+A Sbjct: 63 FRGSPLLVQLFVIFYGLPSVGIVLDPLTAAVIGFSLNVGAYNAEVIRGVIESIPKGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++ +TR Q +R ILPQ + LS+ FIS++K TS+A+ +T+PEIFQ AQRI + Sbjct: 123 AYSMAMTRPQALRRAILPQAARVALPALSNSFISLVKDTSLAAVLTVPEIFQAAQRIAAV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TY+P+I+Y E A +YL+L+S +Q ++E +H Sbjct: 183 TYEPMILYTEAALIYLLLSSVLSTLQRRLEIRFGRHA 219 >gi|308070241|ref|YP_003871846.1| amino acid ABC transporter permease yckJ [Paenibacillus polymyxa E681] gi|305859520|gb|ADM71308.1| Probable amino-acid ABC transporter permease protein yckJ [Paenibacillus polymyxa E681] Length = 222 Score = 204 bits (518), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 101/221 (45%), Positives = 150/221 (67%), Gaps = 1/221 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +IIDS LL A + T+P+ ISF + L++ A+ R+ I+ LI F Sbjct: 1 MDDRQIQIIIDSLLPLLKAGVSFTIPLTLISFALGLVLALITALARLS-KWRILKLIFGF 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YVW+ RGTPLLVQL++IFYGLP +GI D F+A +I TL+ AY SEIIR++IISI +G Sbjct: 60 YVWVIRGTPLLVQLYIIFYGLPSVGITLDPFIASVIGFTLSVGAYSSEIIRAAIISIQEG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A Y++G+TR Q +R I+LPQ S PL++ FIS++K TS+A+TIT E+F+TA + Sbjct: 120 QWEAGYSLGMTRWQVLRRIVLPQASRVSVPPLANSFISLVKDTSLAATITYVEMFRTANQ 179 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 IV+TTY+PL++Y E +YL+ ++ ++Q +E + + + Sbjct: 180 IVATTYEPLLVYTEAGVIYLLFSTILTVLQNYLEKRLGRFS 220 >gi|167585065|ref|ZP_02377453.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia ubonensis Bu] Length = 226 Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 100/217 (46%), Positives = 144/217 (66%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +L+ S LLYA +V T+P+ SF I L++ F A + F + FY+W+ Sbjct: 4 WLHLMAQSLWPLLYAGLVFTVPLTLASFAIGLLL-AFAAALARLFGPRWARAAVRFYIWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRG+PLLVQLFVIFYGLP++GIV D A +I +LN AY +E+IR I SIPKGQW+A Sbjct: 63 FRGSPLLVQLFVIFYGLPNVGIVLDPLTAAVIGFSLNVGAYNAEVIRGVIESIPKGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++ +TR Q +R ILPQ + LS+ FIS++K TS+A+ +T+PE+FQ AQRI + Sbjct: 123 AYSMAMTRAQALRRAILPQAARVALPALSNSFISLVKDTSLAAVLTVPEVFQAAQRIAAV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TY+PLI+Y E A +YL+ +S +Q ++E+ +H Sbjct: 183 TYEPLILYTEAALIYLLFSSVLSTLQQRLETHFGRHA 219 >gi|251797221|ref|YP_003011952.1| polar amino acid ABC transporter inner membrane protein [Paenibacillus sp. JDR-2] gi|247544847|gb|ACT01866.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. JDR-2] Length = 223 Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 103/209 (49%), Positives = 146/209 (69%), Gaps = 3/209 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMHFYVWIF 65 ++ DSF LL+A I T+P+ ISF + L++ + SD I I FYVWI Sbjct: 8 DIFTDSFLPLLHAGIAFTVPLTLISFALGLVL--ALLTALARLSDFYPIVWIARFYVWII 65 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+IFYGLP +GI+ D+F A +I TL+ AY SEIIR++I+SIPKGQW+A+ Sbjct: 66 RGTPLLVQLFIIFYGLPSVGILIDAFPAAVIGFTLSVGAYGSEIIRAAIVSIPKGQWEAA 125 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +++G TR Q +R IILPQ + PLS+ FIS++K TS+A+T+T+ E+FQ Q+I + Sbjct: 126 FSLGETRLQALRRIILPQAARVTVPPLSNSFISLVKDTSLAATVTVTELFQKGQQITAAV 185 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Y+PL+IYCE+A +YLI S ++Q ++E Sbjct: 186 YEPLLIYCEVALIYLIFCSILALLQRQLE 214 >gi|297571711|ref|YP_003697485.1| polar amino acid ABC transporter inner membrane protein [Arcanobacterium haemolyticum DSM 20595] gi|296932058|gb|ADH92866.1| polar amino acid ABC transporter, inner membrane subunit [Arcanobacterium haemolyticum DSM 20595] Length = 222 Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 92/214 (42%), Positives = 146/214 (68%), Gaps = 1/214 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +L DS P LL A + VT+P+A ISFVI+L++G +AV+R F +++ I YVWIF Sbjct: 5 LSLWADSLPALLAATVTVTIPLALISFVIALVLGGLVAVVR-FERILVLAQIGAVYVWIF 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF++FYGLP GIV D++ I++L LN AY +E +RS + ++P+GQW+A Sbjct: 64 RGTPLLVQLFIVFYGLPRAGIVIDAWPVAIMTLALNAGAYTAEALRSGLKAVPRGQWEAG 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++ +T +Q + I+ PQ + PLSS+FI ++K TS+ S+IT+ ++F Q++ + T Sbjct: 124 QSLNMTHRQILWSIVAPQAFRIAIPPLSSDFIDLVKGTSLVSSITLVDVFLRGQQLAAVT 183 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 ++PL++Y E+AF+YL++ S Q +E ++ Sbjct: 184 FEPLLLYVEVAFIYLMINSVLTAGQHWLEKRTSK 217 >gi|241895475|ref|ZP_04782771.1| ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] gi|241871449|gb|EER75200.1| ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] Length = 235 Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 102/226 (45%), Positives = 149/226 (65%), Gaps = 11/226 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYV 62 + +I S PQL+ A I T+P++ ISF + LI+ A++RI II I +FYV Sbjct: 2 WEIITTSLPQLIVAGIKYTVPLSLISFALGLILALITALVRISQKGKEFKIIKGIFNFYV 61 Query: 63 WIFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 W+FR TPLLVQLF++++GLP++ GI FVA +I+ +LN AY SE IR++I Sbjct: 62 WLFRSTPLLVQLFIVYFGLPYLVIPGILDEGIKLTPFVAGVITFSLNTGAYASETIRAAI 121 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+P+GQW+A+ +IG+TR QT+R IILPQ I S PL++ FIS++K TS+A+TITI E+ Sbjct: 122 TSVPQGQWEAASSIGMTRSQTLRRIILPQAIYLSVPPLANSFISLVKDTSLAATITIVEM 181 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 F+ +Q+I + YQPLI+Y +A +Y + S I Q +E +H Sbjct: 182 FEVSQQIAAENYQPLIMYSLVALIYAVFCSLLTIGQHYLEKHSHKH 227 >gi|294635975|ref|ZP_06714417.1| L-cystine ABC transporter, permease protein [Edwardsiella tarda ATCC 23685] gi|291090704|gb|EFE23265.1| L-cystine ABC transporter, permease protein [Edwardsiella tarda ATCC 23685] Length = 232 Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 99/210 (47%), Positives = 148/210 (70%), Gaps = 1/210 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W ++++F LL A + ++P+A ++F L++G A+IR++ + + FYVW+ Sbjct: 17 WLQPVVEAFWPLLSAGLRFSVPLALLAFAGGLLLGLATALIRLY-GVWPLRVCADFYVWV 75 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP GI D+F A +I TLN AY SEI+R +I+S+P+GQW+A Sbjct: 76 IRGTPLLVQLFLIFYGLPSAGITLDAFPAALIGFTLNVGAYSSEIMRGAILSVPRGQWEA 135 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + AIG++ QT+R +ILPQ++ S PLS+ FIS+LK TS+A+ IT+PE+F AQRIV+ Sbjct: 136 ASAIGMSSSQTLRRVILPQSVFVSLPPLSNSFISLLKDTSLAAVITVPEMFLAAQRIVAV 195 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Y+PLIIY E A +YL ++ +Q+++E Sbjct: 196 NYEPLIIYSETALIYLAFSTLLGKLQLRLE 225 >gi|212640130|ref|YP_002316650.1| amino acid ABC transporter permease [Anoxybacillus flavithermus WK1] gi|212561610|gb|ACJ34665.1| ABC-type amino acid transport system, permease component [Anoxybacillus flavithermus WK1] Length = 236 Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 102/214 (47%), Positives = 141/214 (65%), Gaps = 1/214 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+ S L A++ T+P+A I+F+I L+I A+ R+ S + I YV R Sbjct: 21 NIAKGSLLPLAKGALLYTIPLATITFIIGLVIALLTALARLS-SIKALQWIARAYVSAIR 79 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQLF+IFYGLP IGI+ D A II +LN AY SEIIR++I+SIPKGQW+A+Y Sbjct: 80 GTPLLVQLFIIFYGLPTIGIIIDPLPAAIIGFSLNVGAYASEIIRAAILSIPKGQWEAAY 139 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+ QT+R IILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I +T Y Sbjct: 140 SLGMDDVQTLRRIILPQAARVSVPPLSNTFISLVKDTSLASLILVSEMFRKAQEIAATNY 199 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + L++Y E A +Y I+ F IIQ IES + ++ Sbjct: 200 EFLLLYTEAALIYWIICFFLSIIQGNIESRLNRY 233 >gi|319942012|ref|ZP_08016331.1| hypothetical protein HMPREF9464_01550 [Sutterella wadsworthensis 3_1_45B] gi|319804396|gb|EFW01274.1| hypothetical protein HMPREF9464_01550 [Sutterella wadsworthensis 3_1_45B] Length = 221 Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 99/212 (46%), Positives = 142/212 (66%), Gaps = 1/212 (0%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 DSF QLL I VT+P+ ISF I L++ IA+IR ++ + YVWIFRGTP Sbjct: 11 DSFTQLLIPGICVTIPLTLISFAIGLVVAVAIALIRTA-KTPVLEPLARIYVWIFRGTPA 69 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LVQLFVIF+GLP IGIV D+F + +I+ +LN AY SE +R++I ++PKGQ +A +G+ Sbjct: 70 LVQLFVIFFGLPSIGIVIDAFPSAVIAFSLNVGAYASEALRAAISAVPKGQLEAGLCVGM 129 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + QT+ I+LPQ T+ PL +EFIS++K+TS+AS+IT+ E+F +AQRI + TY+P Sbjct: 130 SWTQTMFRIVLPQAFRTAFPPLFNEFISLVKNTSLASSITVYEMFMSAQRIAARTYEPFW 189 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 +Y E A +YL T+ IQ+ E + + Y Sbjct: 190 LYLEAAVIYLAFTTILSRIQVWGEKKLQHYDY 221 >gi|266619128|ref|ZP_06112063.1| L-cystine ABC transporter, permease protein [Clostridium hathewayi DSM 13479] gi|288869357|gb|EFD01656.1| L-cystine ABC transporter, permease protein [Clostridium hathewayi DSM 13479] Length = 225 Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 93/220 (42%), Positives = 149/220 (67%), Gaps = 1/220 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L+I SF L+ A + +T+P+ ISF + +I+ F A+ RI + ++S FYVW+ R Sbjct: 6 QLLISSFWPLMKAGLKMTVPLTLISFALGMILAFITAMCRIS-KNKLLSKTAQFYVWVIR 64 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTP++VQLFVIFYGLP +GI+F V+ II LT++ AY SEIIR+++ SIPKGQW+A + Sbjct: 65 GTPMIVQLFVIFYGLPKVGIMFSPIVSAIIGLTISEGAYDSEIIRAALTSIPKGQWEACH 124 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G+++ QT+ ++I+PQ + L + FIS++K TS+ + +T+ E+FQ Q+IV+ T+ Sbjct: 125 ALGMSKFQTLSNVIIPQAALIAVPSLGNMFISLVKDTSLTAILTVREVFQIGQQIVAVTF 184 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 +PL IY E+ +YLI ++ +Q +E + +H D+ Sbjct: 185 EPLWIYLEVGLIYLIYSTVLSQLQGVLERKLGKHMLVKDE 224 >gi|319650477|ref|ZP_08004617.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2] gi|317397658|gb|EFV78356.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2] Length = 233 Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 98/210 (46%), Positives = 141/210 (67%), Gaps = 1/210 (0%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +SF LL AIV T+P+ ISF+ L + F A+ RI + + I YV RGTPL Sbjct: 22 NSFQPLLEGAIVYTIPLTLISFIFGLALAIFTALARIS-GNKALETIAGIYVSAIRGTPL 80 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LVQLF+IFYGLP IG++ D F + II +LN AY SEIIR++I+SIPKGQW+A Y+IG+ Sbjct: 81 LVQLFIIFYGLPTIGVIIDPFPSAIIGFSLNVGAYSSEIIRAAILSIPKGQWEAGYSIGM 140 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + QT++ IILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I +T Y+ L+ Sbjct: 141 SYSQTLKRIILPQASRVSIPPLSNSFISLVKDTSLASMILVTEMFRRAQEIAATNYEFLL 200 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +Y + AF+Y ++ I+Q ++E + ++ Sbjct: 201 LYTQAAFIYWVICFMLSILQGRLERRLDRY 230 >gi|184156274|ref|YP_001844614.1| amino acid ABC transporter permease component [Lactobacillus fermentum IFO 3956] gi|227514071|ref|ZP_03944120.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus fermentum ATCC 14931] gi|183227618|dbj|BAG28134.1| amino acid ABC transporter permease component [Lactobacillus fermentum IFO 3956] gi|227087552|gb|EEI22864.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus fermentum ATCC 14931] Length = 229 Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 96/228 (42%), Positives = 151/228 (66%), Gaps = 7/228 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-------TIISLIM 58 +++I S P++ +A I T+PIA ISFVI L+I A+IRI ++ + Sbjct: 2 WDIIKSSTPEIFWAGIKYTIPIAIISFVIGLVIAVITALIRISKPHGKSKAVWAVVRAVF 61 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 FYVW+FR TPLLVQLF++F+GLP++GI F+++ A II+ +LN AY SE IR +++SIP Sbjct: 62 SFYVWLFRSTPLLVQLFIVFFGLPNVGIQFNAWTAGIITFSLNTGAYASETIRGALLSIP 121 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 QWDA+Y+IG+T +Q + I+ PQ + + PLS+ FI ++K TS+AS+ITI E+F + Sbjct: 122 DSQWDAAYSIGMTYRQVLFRIVFPQALRVALPPLSNSFIGLVKDTSLASSITIVEMFMVS 181 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 Q+I S YQPL++Y +A +Y + + I+Q +E +++ +V + Sbjct: 182 QQIASNNYQPLLMYSIVAAIYALFCTVLSILQHYLEKWTSRYVDAVGE 229 >gi|260662492|ref|ZP_05863387.1| amino acid ABC transporter permease component [Lactobacillus fermentum 28-3-CHN] gi|260553183|gb|EEX26126.1| amino acid ABC transporter permease component [Lactobacillus fermentum 28-3-CHN] Length = 245 Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 96/228 (42%), Positives = 151/228 (66%), Gaps = 7/228 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-------TIISLIM 58 +++I S P++ +A I T+PIA ISFVI L+I A+IRI ++ + Sbjct: 18 WDIIKSSTPEIFWAGIKYTIPIAIISFVIGLVIAVITALIRISKPQGKFKAVWAVVRAVF 77 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 FYVW+FR TPLLVQLF++F+GLP++GI F+++ A II+ +LN AY SE IR +++SIP Sbjct: 78 SFYVWLFRSTPLLVQLFIVFFGLPNVGIQFNAWTAGIITFSLNTGAYASETIRGALLSIP 137 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 QWDA+Y+IG+T +Q + I+ PQ + + PLS+ FI ++K TS+AS+ITI E+F + Sbjct: 138 DSQWDAAYSIGMTYRQVLFRIVFPQALRVALPPLSNSFIGLVKDTSLASSITIVEMFMVS 197 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 Q+I S YQPL++Y +A +Y + + I+Q +E +++ +V + Sbjct: 198 QQIASNNYQPLLMYSIVAAIYALFCTVLSILQHYLEKWTSRYVDAVGE 245 >gi|310643432|ref|YP_003948190.1| amino acid abc-type transporter, permease component [Paenibacillus polymyxa SC2] gi|309248382|gb|ADO57949.1| Amino acid ABC-type transporter, permease component [Paenibacillus polymyxa SC2] Length = 222 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 98/221 (44%), Positives = 149/221 (67%), Gaps = 1/221 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +I+DS LL A + T+P+ ISF + L++ I + I+ LI F Sbjct: 1 MDDRQIQIIMDSLLPLLKAGVSFTIPLTLISFALGLLL-ALITALARLSKWRILKLIFGF 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YVW+ RGTPLLVQL++IFYGLP +GI D F+A +I TL+ AY SEI+R++IISI +G Sbjct: 60 YVWVIRGTPLLVQLYIIFYGLPSVGITLDPFIASVIGFTLSVGAYSSEIMRAAIISIQEG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A Y++G+TR Q +R I+LPQ S PL++ FIS++K TS+A+TIT E+F+TA + Sbjct: 120 QWEAGYSLGMTRWQVLRRIVLPQASRVSVPPLANSFISLVKDTSLAATITYVEMFRTANQ 179 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 IV+TTY+PL++Y E +YL+ ++ ++Q +E +++ + Sbjct: 180 IVATTYEPLLVYTEAGVIYLLFSTILTVLQNYLEKRLSRFS 220 >gi|226313903|ref|YP_002773799.1| L-cystine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226096853|dbj|BAH45295.1| L-cystine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 231 Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 95/217 (43%), Positives = 145/217 (66%), Gaps = 1/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W ++ SF LL A++ +L IA +F I LI+ A+ R+ +I I FYV Sbjct: 15 RWIDIAQSSFLPLLKGALLYSLTIAIAAFFIGLILAVLTALARLSGIKPLIG-IARFYVS 73 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I RGTPLLVQLF+IFYGLP IG++ D + II +L+ AY SE++R++I+SI KGQW+ Sbjct: 74 IIRGTPLLVQLFIIFYGLPSIGLMIDPIPSAIIGFSLSVGAYSSEVVRAAILSIQKGQWE 133 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y++G+T Q +R ++LPQ S PLS+ FIS++K TS+AS + +PE+F+ AQ +V+ Sbjct: 134 AAYSLGMTYWQALRRVVLPQAARVSIPPLSNSFISLVKDTSLASVVLVPEMFRKAQEVVA 193 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TY+PL++Y E A +Y ++ IIQ +IE+ + ++ Sbjct: 194 ATYEPLLVYAEAALIYWVICFVLSIIQDRIENKLDRY 230 >gi|171740988|ref|ZP_02916795.1| hypothetical protein BIFDEN_00050 [Bifidobacterium dentium ATCC 27678] gi|283455623|ref|YP_003360187.1| ABC transporter permease [Bifidobacterium dentium Bd1] gi|171276602|gb|EDT44263.1| hypothetical protein BIFDEN_00050 [Bifidobacterium dentium ATCC 27678] gi|283102257|gb|ADB09363.1| Permease protein of ABC transporter system [Bifidobacterium dentium Bd1] Length = 220 Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 94/209 (44%), Positives = 141/209 (67%), Gaps = 4/209 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + +I+DSF +LL + VT+P+ ISFV+ L + +A++R+ +I I F Sbjct: 1 MDGRLWGVIVDSFDKLLIPGLTVTIPLTLISFVVGLALAIAVALVRVA-KVPVIQRIAQF 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YVW+FRGTPLLVQLFVIF+GLP +GIV +F + II+ +LN AY SE +R +I+++PKG Sbjct: 60 YVWVFRGTPLLVQLFVIFFGLPSVGIVVPAFPSAIIAFSLNVGAYASETLRGAILAVPKG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A L +R I+LPQ ++ L + FIS++K TS+A+ IT+ E+F AQR Sbjct: 120 QIEAGLTTNLNYLTIMRLIVLPQAFKSAFPALFNTFISLVKDTSLAANITVAEMFMAAQR 179 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYII 209 IV+TTY+PL++YCE+ +YL +FC ++ Sbjct: 180 IVATTYEPLVLYCEVGLIYL---AFCTVL 205 >gi|294788441|ref|ZP_06753684.1| L-cystine ABC transporter, permease protein [Simonsiella muelleri ATCC 29453] gi|294483872|gb|EFG31556.1| L-cystine ABC transporter, permease protein [Simonsiella muelleri ATCC 29453] Length = 238 Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 97/218 (44%), Positives = 142/218 (65%), Gaps = 4/218 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM----HFYV 62 L++DSF ++ A +V+LP+A ISFV ++I +A++RI SD I+ I+ +YV Sbjct: 18 QLVMDSFLPMVQAGFMVSLPLAMISFVCGILIAIGVALVRISPSDNILHHILLKLTKYYV 77 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I RGTPLLVQL ++FYGLP +GI D A II +LN AY SE IRS+I+S+PKGQW Sbjct: 78 GIIRGTPLLVQLSIVFYGLPALGIYIDPIPAAIIGFSLNTGAYASETIRSAILSVPKGQW 137 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A ++IG+T QT R II PQ + PLS++FI + K+TS+AS +T+ E+F+ AQ+ Sbjct: 138 EAGFSIGMTYMQTFRRIIAPQAFRVAVPPLSNDFIGLFKNTSLASVVTVTELFRVAQQYA 197 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + +Y L +Y E VY ++IQ +IE ++H Sbjct: 198 NLSYDFLPVYIEAGVVYWCFCMVLFLIQARIEKRFSRH 235 >gi|255323270|ref|ZP_05364405.1| L-cystine transport system permease protein TcyB [Campylobacter showae RM3277] gi|255299793|gb|EET79075.1| L-cystine transport system permease protein TcyB [Campylobacter showae RM3277] Length = 224 Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 93/214 (43%), Positives = 142/214 (66%), Gaps = 1/214 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L++ S + A I VTLP+ ISF + L+I A+ RI + I+ + FY+WIFR Sbjct: 11 ELLLSSLQPMALAMIKVTLPLTAISFSLGLLIAILTAIARIA-NIKILKQLSEFYIWIFR 69 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQLF++++GLP +G+ D + A II+ +LN AY SE +R++++S+PKGQW+A+ Sbjct: 70 GTPLLVQLFIVYFGLPIVGVTLDVWSAAIITFSLNIGAYASEAVRAAVLSVPKGQWEAAT 129 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G++ Q +R II PQ S PLS+ FIS LK TS+A++IT+ ++F AQRI + T+ Sbjct: 130 ALGMSYTQILRRIIAPQAARISLPPLSNIFISTLKDTSLAASITMVDMFMVAQRIAARTF 189 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 PL +Y A YLI+ +F +Q K+E +++ Sbjct: 190 DPLTLYVLAALFYLIVCTFLTFLQAKLEKRFSRY 223 >gi|227891344|ref|ZP_04009149.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] gi|301301148|ref|ZP_07207305.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|227866922|gb|EEJ74343.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] gi|300851277|gb|EFK79004.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 231 Score = 187 bits (476), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 96/226 (42%), Positives = 149/226 (65%), Gaps = 11/226 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYV 62 ++ +I S P+L+ A I T+P+A ISF++ LI+ A+IRI + +I I FYV Sbjct: 2 WHTVISSLPELISAGIKYTIPLAIISFILGLILALVTALIRISQTKGPFLVIKAIFRFYV 61 Query: 63 WIFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 W+FR TPLLVQLF++++GLP++ GI D F + II +LN AY SE IR++I Sbjct: 62 WLFRSTPLLVQLFIVYFGLPYLKIKGLAPEGIKLDPFTSGIIVFSLNTGAYASETIRAAI 121 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 SIPKGQW+A+ +IG+T KQ + II+PQ S PL++ FI ++K TS+A++ITI E+ Sbjct: 122 TSIPKGQWEAAASIGMTHKQALMRIIIPQAARVSLPPLANSFIGLVKDTSLAASITIVEM 181 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 F+ +Q+I + Y+PL++YC +A +Y IL + +Q +E +++ Sbjct: 182 FEVSQQIAAENYEPLVMYCTVAVLYAILCTVLSFLQGWLEKVTSRY 227 >gi|229553604|ref|ZP_04442329.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus rhamnosus LMS2-1] gi|258538745|ref|YP_003173244.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc 705] gi|229313024|gb|EEN78997.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus rhamnosus LMS2-1] gi|257150421|emb|CAR89393.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus Lc 705] Length = 237 Score = 187 bits (476), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 100/232 (43%), Positives = 148/232 (63%), Gaps = 12/232 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH----FY 61 + +I D+ PQ++ A I T+PIA +SF I LII A+ RI I+ I FY Sbjct: 2 WKIITDAVPQMIAAGIKYTIPIALVSFAIGLIIALVTALTRISVRKGILIRIAKGIAVFY 61 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 VW+FR TPLLVQLF++F+GLP + GI D A II+ +LN AY +E IR+S Sbjct: 62 VWLFRSTPLLVQLFIVFFGLPSLIIPGIFPHGIKLDPVAAGIITFSLNTGAYCAETIRAS 121 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++SI GQW+A+YAIGL R+ +R II+PQ + T+ PLS+ FIS++K TS+A++ITI E Sbjct: 122 LLSIDSGQWEAAYAIGLPRRLVLREIIIPQALRTAIPPLSNSFISLIKDTSLAASITIVE 181 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +FQ +Q+I + YQPL++Y +A +Y I+ +F Q +E +++ + Sbjct: 182 MFQVSQQIAAENYQPLLMYSIVALLYAIVCTFLAWGQRHLEKFTSRYNANAQ 233 >gi|90962595|ref|YP_536511.1| amino acid ABC transporter permease [Lactobacillus salivarius UCC118] gi|90821789|gb|ABE00428.1| Amino acid ABC transporter, permease protein [Lactobacillus salivarius UCC118] Length = 231 Score = 187 bits (476), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 95/226 (42%), Positives = 149/226 (65%), Gaps = 11/226 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYV 62 ++ +I S P+L+ A I T+P+A +SF++ LI+ A+IRI + +I I FYV Sbjct: 2 WHTVISSLPELISAGIKYTIPLAIVSFILGLILALVTALIRISQTKGPFLVIKAIFRFYV 61 Query: 63 WIFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 W+FR TPLLVQLF++++GLP++ GI D F + II +LN AY SE IR++I Sbjct: 62 WLFRSTPLLVQLFIVYFGLPYLKIKGLAPEGIKLDPFTSGIIVFSLNTGAYASETIRAAI 121 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 SIPKGQW+A+ +IG+T KQ + II+PQ S PL++ FI ++K TS+A++ITI E+ Sbjct: 122 TSIPKGQWEAAASIGMTHKQALMRIIIPQAARVSLPPLANSFIGLVKDTSLAASITIVEM 181 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 F+ +Q+I + Y+PL++YC +A +Y IL + +Q +E +++ Sbjct: 182 FEVSQQIAAENYEPLVMYCTVAVLYAILCTVLSFLQGWLEKVTSRY 227 >gi|223985124|ref|ZP_03635220.1| hypothetical protein HOLDEFILI_02526 [Holdemania filiformis DSM 12042] gi|223962946|gb|EEF67362.1| hypothetical protein HOLDEFILI_02526 [Holdemania filiformis DSM 12042] Length = 219 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 92/220 (41%), Positives = 146/220 (66%), Gaps = 1/220 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++I+SF Q+L + +T+P+ +SF LI+ A++++ ++ I F Sbjct: 1 MNERILRILIESFWQILLPGLTMTIPLTILSFTFGLILALLAALVQVA-EIRVLKPIARF 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+W+ RGTPLLVQLFVIFYGLP +GI+ D+F + +I ++N AY +E IR++I S+P+G Sbjct: 60 YIWVIRGTPLLVQLFVIFYGLPSLGILLDAFPSAVIVFSVNTGAYAAETIRAAIESVPRG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A Y GLT QT+R IILPQ + T+ PLS+ IS++K TS+A+ ITI E+F +QR Sbjct: 120 QLEAGYCAGLTYAQTMRRIILPQAMRTAFAPLSNSLISLVKDTSLAANITILEMFMASQR 179 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I + TY+P +YCE+ +YL+ + +Q ++E+ + Q+ Sbjct: 180 IAARTYEPFALYCEVGLIYLLFCTVLTALQRRLETKMPQY 219 >gi|327438995|dbj|BAK15360.1| ABC-type amino acid transport system, permease component [Solibacillus silvestris StLB046] Length = 219 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 89/215 (41%), Positives = 150/215 (69%), Gaps = 1/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++++ S +L A ++VT+P++ I+F I+++I A+ RI + ++ I YVW+F Sbjct: 5 MDILLSSIWPILKAGLLVTIPLSLIAFAIAVVIAVATALARIS-NYRVLRWIFGAYVWMF 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF++F+GLP +GI D++ A II+ +LN AY SE IR+SI++IPKGQW+A+ Sbjct: 64 RGTPLLVQLFIVFFGLPKLGITLDAWTAAIITFSLNTGAYASESIRASILAIPKGQWEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+T Q +R +I PQT+ S P++++FI ++K TS+ ++IT+ ++F Q+I + T Sbjct: 124 ESLGMTYWQMMRRVIAPQTVRISLPPVANDFIDMVKGTSLVASITLADLFMVGQQITART 183 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y+PL+IY A +YLI S +IQ ++E +++ Sbjct: 184 YEPLMIYSLCAVIYLIFISVLMVIQGRLEKYASKY 218 >gi|295115402|emb|CBL36249.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SM4/1] Length = 234 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 94/226 (41%), Positives = 144/226 (63%), Gaps = 1/226 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++ +SF +L A I T+P+ I+F + ++ +A+IRI I+ I Sbjct: 1 MDARTIEILTESFWPILKAGITYTIPLTLIAFALGTLLAVLVAIIRIS-RVPILDRICEL 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YVWI RGTPLLVQLF++F+GLP +GIV D + I+ TL+ AY SEI R++I+SIPKG Sbjct: 60 YVWIIRGTPLLVQLFLVFFGLPKVGIVIDPMPSGILVFTLSIGAYSSEIFRAAILSIPKG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ ++G++ Q + +ILPQ + S PL + FI+++K TS+A+ ITIPE+F T QR Sbjct: 120 QWEAAMSLGMSYPQQLIRVILPQAVKISVPPLFNSFIALVKDTSLAANITIPEMFLTTQR 179 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 I + Y+PL++Y E+ F+YLI + +Q K+E + + K Sbjct: 180 ITARNYEPLLMYIEVGFIYLIFCTVLNYLQKKVEDRLMLTPHEKKK 225 >gi|28379592|ref|NP_786484.1| amino acid ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|254557736|ref|YP_003064153.1| amino acid ABC transporter, permease protein [Lactobacillus plantarum JDM1] gi|300769532|ref|ZP_07079418.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308181822|ref|YP_003925950.1| amino acid ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28272432|emb|CAD65356.1| amino acid ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|254046663|gb|ACT63456.1| amino acid ABC transporter, permease protein [Lactobacillus plantarum JDM1] gi|300492947|gb|EFK28129.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308047313|gb|ADN99856.1| amino acid ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 235 Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 94/231 (40%), Positives = 155/231 (67%), Gaps = 11/231 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYV 62 +++I+ S PQ+ A + T+PIA ISF++ LI+ F A+++I I+ I +FYV Sbjct: 5 WHIIVTSTPQIAAAGLKYTIPIAIISFILGLILAIFTALVKISTRRGWFLILKAIANFYV 64 Query: 63 WIFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 W+FR TPLLVQLF++++GLP++ G+ D + A I + +LN AY +E IR++I Sbjct: 65 WLFRSTPLLVQLFIVYFGLPYLKIKGLFPNGVQLDPWTAGIATFSLNTGAYCAETIRAAI 124 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +SIP+GQW+A+Y+IG+T+ Q ++ IILPQ S PLS+ FIS++K TS+A++ITI E+ Sbjct: 125 LSIPQGQWEAAYSIGMTKSQVLKRIILPQAARVSLPPLSNSFISLVKDTSLAASITIIEM 184 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 F+ +Q+I + YQPL++Y +A +Y IL + +Q +E +++ ++ Sbjct: 185 FEVSQQIAAQNYQPLVMYSLVAALYAILCTILSWLQGYLEKRTSRYLRPLN 235 >gi|227508252|ref|ZP_03938301.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227511259|ref|ZP_03941308.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227523474|ref|ZP_03953523.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] gi|227085510|gb|EEI20822.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227089369|gb|EEI24681.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] gi|227192481|gb|EEI72548.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 232 Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 101/226 (44%), Positives = 150/226 (66%), Gaps = 11/226 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYV 62 +++I S PQLL A T+PIA ISFVI LII F A+IR+ ++ I FYV Sbjct: 2 WHIIQTSTPQLLEAGFKYTIPIAIISFVIGLIIALFTALIRLSSKRGAFLMLKAIFRFYV 61 Query: 63 WIFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 W+FR TPLLVQLF++++GLP++ GI + +A II+ +LN AY SE IR+SI Sbjct: 62 WLFRSTPLLVQLFIVYFGLPYLKIKGIFPNGIQLNPVIAGIITFSLNTGAYCSETIRASI 121 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +SIP+GQW+A+Y+IG+T+ +R IILPQ I S PL++ FIS++K TS+A++ITI E+ Sbjct: 122 LSIPEGQWEAAYSIGMTKSVVLRRIILPQAIRISLPPLANSFISLVKDTSLAASITIVEM 181 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 F+ +Q+I + YQPLI+Y +A Y + + +Q +E +++ Sbjct: 182 FEVSQQIAAQNYQPLIMYSLVAVYYAVFCTVLTWLQGYLEKVTSRY 227 >gi|160941548|ref|ZP_02088880.1| hypothetical protein CLOBOL_06446 [Clostridium bolteae ATCC BAA-613] gi|158435513|gb|EDP13280.1| hypothetical protein CLOBOL_06446 [Clostridium bolteae ATCC BAA-613] Length = 234 Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 94/217 (43%), Positives = 143/217 (65%), Gaps = 1/217 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++ SF +L A I T+P+ ISF + + F+A+IRI +++ I Sbjct: 1 MDARSIEILTSSFWPILKAGISFTIPLTLISFALGTTLAVFVAIIRIS-KVPVLNKICEL 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YVWI RGTPLLVQLF++F+GLP +G+V + + I+ TL+ AY SEIIR++I+SIPKG Sbjct: 60 YVWIIRGTPLLVQLFLVFFGLPKVGVVINPMPSGILVFTLSIGAYSSEIIRAAILSIPKG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ ++G++ Q + IILPQ S PL + FI+++K TS+A+ ITIPE+F T QR Sbjct: 120 QWEAAMSLGMSYPQQLLRIILPQAFKISVPPLFNSFIALVKDTSLAANITIPEMFLTTQR 179 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 I + Y+PL++Y E+ F+YLI + +Q +IE+ + Sbjct: 180 ITARNYEPLLMYIEVGFIYLIFCTVLNYVQNRIENKL 216 >gi|308388974|gb|ADO31294.1| amino acid permease integral membrane protein [Neisseria meningitidis alpha710] Length = 227 Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 90/218 (41%), Positives = 139/218 (63%), Gaps = 4/218 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM----HFYV 62 ++I+ +F ++ A V+LP+A SFVI ++I +A++RI + I+ I+ FY+ Sbjct: 7 DMIVSAFLPMVKAGFAVSLPLAAASFVIGMMIAVAVALVRIMPAGGIVRKILLKLVEFYI 66 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTPLLVQL ++FYGLP +GI D A II +LN AY SE IR++I+S+PKGQW Sbjct: 67 SVIRGTPLLVQLVIVFYGLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQW 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A ++IG+T QT R I+ PQ + PLS+EFI + K+TS+A+ +T+ E+F+ AQ Sbjct: 127 EAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETA 186 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + TY L +Y E A VY ++IQ ++E ++ Sbjct: 187 NRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 224 >gi|260914457|ref|ZP_05920926.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Pasteurella dagmatis ATCC 43325] gi|260631558|gb|EEX49740.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Pasteurella dagmatis ATCC 43325] Length = 238 Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 96/224 (42%), Positives = 146/224 (65%), Gaps = 4/224 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM-- 58 M E +L+I SF +L A ++ T+P+A ISF L+I +AVIR S ++ I+ Sbjct: 14 MNEERADLLISSFWPMLEATLISTIPLALISFFAGLLIAVGVAVIRTMPSQSVFHRILVG 73 Query: 59 --HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 YV I RGTP+LVQ+F+IFYGLP IGI D F II+ +LN AY SE +R++I+S Sbjct: 74 LARIYVSIIRGTPMLVQIFIIFYGLPEIGITLDPFPTAIIAFSLNIGAYASETVRAAILS 133 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQW+ASYAIG+ +Q I+PQ + S PLS+ FIS +K TS+AS + + E+F+ Sbjct: 134 IPKGQWEASYAIGMGYRQAFIRTIIPQAMRVSVPPLSNTFISTVKDTSLASLVLVTELFR 193 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 AQ + +++Y+ +++Y + A +Y I+ I+Q ++E +++H Sbjct: 194 IAQNVAASSYEFILVYSQAALIYWIICFVLSIVQQRVEMRLSRH 237 >gi|258507568|ref|YP_003170319.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG] gi|257147495|emb|CAR86468.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus GG] gi|259648917|dbj|BAI41079.1| ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 237 Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 99/232 (42%), Positives = 148/232 (63%), Gaps = 12/232 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH----FY 61 + +I D+ PQ++ A I T+PIA +SF I LII A+ RI ++ I FY Sbjct: 2 WKIITDAVPQMIAAGIKYTIPIALVSFAIGLIIALVTALTRISVRKGVLIRIAKGIAVFY 61 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 VW+FR TPLLVQLF++F+GLP + GI D A II+ +LN AY +E IR+S Sbjct: 62 VWLFRSTPLLVQLFIVFFGLPSLIIPGIFPHGIKLDPVAAGIITFSLNTGAYCAETIRAS 121 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++SI GQW+A+YAIGL R+ +R II+PQ + T+ PLS+ FIS++K TS+A++ITI E Sbjct: 122 LLSIDSGQWEAAYAIGLPRRLVLREIIIPQALRTAIPPLSNSFISLIKDTSLAASITIVE 181 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +FQ +Q+I + YQPL++Y +A +Y I+ +F Q +E +++ + Sbjct: 182 MFQVSQQIAAENYQPLLMYSIVALLYAIVCTFLAWGQRYLEKFTSRYNANAQ 233 >gi|121634582|ref|YP_974827.1| putative amino acid permease integral membrane protein [Neisseria meningitidis FAM18] gi|161869734|ref|YP_001598901.1| amino acid permease integral membrane protein [Neisseria meningitidis 053442] gi|218767907|ref|YP_002342419.1| putative amino acid permease integral membrane protein [Neisseria meningitidis Z2491] gi|304387901|ref|ZP_07370075.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Neisseria meningitidis ATCC 13091] gi|120866288|emb|CAM10029.1| putative amino acid permease integral membrane protein [Neisseria meningitidis FAM18] gi|121051915|emb|CAM08221.1| putative amino acid permease integral membrane protein [Neisseria meningitidis Z2491] gi|161595287|gb|ABX72947.1| amino acid permease integral membrane protein [Neisseria meningitidis 053442] gi|261392845|emb|CAX50426.1| putative amino acid ABC transporter permease protein [Neisseria meningitidis 8013] gi|304338166|gb|EFM04302.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Neisseria meningitidis ATCC 13091] gi|316983780|gb|EFV62761.1| amino ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Neisseria meningitidis H44/76] gi|319410154|emb|CBY90490.1| putative amino acid ABC transporter permease protein [Neisseria meningitidis WUE 2594] gi|325127933|gb|EGC50836.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis N1568] gi|325129938|gb|EGC52738.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis OX99.30304] gi|325131978|gb|EGC54677.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis M6190] gi|325137809|gb|EGC60384.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis ES14902] gi|325140058|gb|EGC62587.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis CU385] gi|325144174|gb|EGC66481.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis M01-240013] gi|325200526|gb|ADY95981.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis H44/76] gi|325203874|gb|ADY99327.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis M01-240355] gi|325206370|gb|ADZ01823.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis M04-240196] Length = 238 Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 90/218 (41%), Positives = 139/218 (63%), Gaps = 4/218 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM----HFYV 62 ++I+ +F ++ A V+LP+A SFVI ++I +A++RI + I+ I+ FY+ Sbjct: 18 DMIVSAFLPMVKAGFAVSLPLAAASFVIGMMIAVAVALVRIMPAGGIVRKILLKLVEFYI 77 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTPLLVQL ++FYGLP +GI D A II +LN AY SE IR++I+S+PKGQW Sbjct: 78 SVIRGTPLLVQLVIVFYGLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQW 137 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A ++IG+T QT R I+ PQ + PLS+EFI + K+TS+A+ +T+ E+F+ AQ Sbjct: 138 EAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETA 197 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + TY L +Y E A VY ++IQ ++E ++ Sbjct: 198 NRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 235 >gi|170780723|ref|YP_001709055.1| putative integral membrane transport protein [Clavibacter michiganensis subsp. sepedonicus] gi|169155291|emb|CAQ00394.1| putative integral membrane transport protein [Clavibacter michiganensis subsp. sepedonicus] Length = 221 Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 92/220 (41%), Positives = 146/220 (66%), Gaps = 2/220 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M EW +L SF L I T+P+A ++F + L I +A++R++ + ++S I F Sbjct: 1 MSREW-DLFWSSFGPLALETIRGTIPLALVTFALGLAIALGLALMRLY-GNRLVSGIARF 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + RGTPLLVQLFVIFYGLP IG+V + + +I+L+LN Y +EIIR+SI+S+P+G Sbjct: 59 YISVVRGTPLLVQLFVIFYGLPSIGVVLPPWPSAVIALSLNVGGYAAEIIRASILSVPRG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A + IG++R T+R II+PQ S PLS+ FIS++K TS+AS I + E+F+ AQ Sbjct: 119 QWEAGHTIGMSRALTLRRIIVPQAARVSVPPLSNTFISLVKDTSLASVILVTELFKQAQL 178 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I S+T++ +++Y E A +Y ++ Q ++E + ++ Sbjct: 179 IASSTFEYMLLYLEAALIYWLVCLVLSFAQTRLERRLDRY 218 >gi|223933819|ref|ZP_03625787.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] gi|330833683|ref|YP_004402508.1| polar amino acid ABC transporter inner membrane subunit [Streptococcus suis ST3] gi|223897502|gb|EEF63895.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] gi|329307906|gb|AEB82322.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis ST3] Length = 219 Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 90/218 (41%), Positives = 143/218 (65%), Gaps = 1/218 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + L++DSF Q+L ++VT+P+ +SF L+I A+++I I+ + F Sbjct: 1 MTERVWQLLLDSFSQILVPGLLVTIPLTILSFTFGLLIAIGTALVQIA-QIPILKQVARF 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+W+ RGTPLLVQL+VIF+GLP +GIV D+F + ++ ++N AY +E IR+SI S+PKG Sbjct: 60 YIWVVRGTPLLVQLYVIFFGLPSLGIVLDAFPSAVLVFSVNTGAYAAETIRASIESVPKG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A Y++G++ QT+R IILPQ + PLS+ I ++K TS+A+ IT+ E+F Q+ Sbjct: 120 QLEAGYSVGMSFAQTMRRIILPQAFRVAFPPLSNTLIGLVKDTSLAANITVLEMFMATQQ 179 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 I + TY+P +YCE+A VYL+ ++ +Q E + Sbjct: 180 IAARTYEPFALYCEVALVYLLFSTILTKLQAYGEKKLA 217 >gi|323358918|ref|YP_004225314.1| amino acid ABC transporter permease [Microbacterium testaceum StLB037] gi|323275289|dbj|BAJ75434.1| ABC-type amino acid transport system, permease component [Microbacterium testaceum StLB037] Length = 221 Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 94/223 (42%), Positives = 149/223 (66%), Gaps = 8/223 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M W +L++DSF ++ A + T+P++ SF I L+I F+A++R+ + ++S I F Sbjct: 1 MNDVW-SLMLDSFWPMVLAGLRGTIPLSLASFAIGLVIALFMALLRLS-RNVVLSGIARF 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ I RGTPLLVQLFVIFYGLP IG+ D F A +I+ +LN Y +E+IR++I+S+P+G Sbjct: 59 YISIIRGTPLLVQLFVIFYGLPTIGVTIDPFPAAVIAFSLNVGGYAAEVIRAAILSVPRG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A++ +GLT +T+ IILPQ S PLS+ FIS++K +S+AS I + E+F+ AQ Sbjct: 119 QWEAAHTVGLTPTKTLTRIILPQAARVSVPPLSNTFISLVKDSSLASLILVSELFRQAQN 178 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYII---QIKIESSVTQH 220 I + +Y+ + +Y E A +Y + FC ++ Q +E + +H Sbjct: 179 IAAFSYEFMAVYLEAALIYWL---FCLVLSFGQNALEKRLDRH 218 >gi|15896569|ref|NP_349918.1| amino acid ABC transporter permease [Clostridium acetobutylicum ATCC 824] gi|15026406|gb|AAK81258.1|AE007829_11 Amino acid ABC-type transporter, permease component [Clostridium acetobutylicum ATCC 824] gi|325510730|gb|ADZ22366.1| Amino acid ABC-type transporter, permease component [Clostridium acetobutylicum EA 2018] Length = 227 Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 99/211 (46%), Positives = 144/211 (68%), Gaps = 1/211 (0%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 DSF LL A + T+P+ ISF++ L++ A+ RI + + L+ FYV I RGTPL Sbjct: 16 DSFLPLLTAGLKFTVPLTLISFILGLLLALVTALARIS-NIKPLELLARFYVSIIRGTPL 74 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LVQLF+IF+GLP +G+ A II TL+ AY SE+IR++I+SIPKGQW+A+ +IG+ Sbjct: 75 LVQLFIIFFGLPTVGVTIKPLTAAIIGFTLSVGAYNSEVIRAAILSIPKGQWEAASSIGM 134 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T Q++ ++LPQ S PL++ FIS++K TS+A+TIT+ E+FQ AQRI +TTY+PL Sbjct: 135 TYTQSLVRVVLPQAARVSVPPLANSFISLVKDTSLAATITVAEMFQVAQRITATTYEPLW 194 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 +Y E AF+Y I S +IQ +E + ++T Sbjct: 195 MYIEAAFIYYIFCSLLTLIQHYLEKKLARYT 225 >gi|325135989|gb|EGC58599.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis M0579] gi|325142042|gb|EGC64473.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis 961-5945] gi|325198007|gb|ADY93463.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis G2136] gi|325202416|gb|ADY97870.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis M01-240149] gi|325207832|gb|ADZ03284.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis NZ-05/33] Length = 238 Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 90/218 (41%), Positives = 138/218 (63%), Gaps = 4/218 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM----HFYV 62 ++I+ +F ++ A V+LP+A SFVI ++I +A++RI + I I+ FY+ Sbjct: 18 DMIVSAFLPMVKAGFAVSLPLAAASFVIGMVIAVAVALVRIMPAGGIARKILLKLVEFYI 77 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTPLLVQL ++FYGLP +GI D A II +LN AY SE IR++I+S+PKGQW Sbjct: 78 SVIRGTPLLVQLVIVFYGLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQW 137 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A ++IG+T QT R I+ PQ + PLS+EFI + K+TS+A+ +T+ E+F+ AQ Sbjct: 138 EAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETA 197 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + TY L +Y E A VY ++IQ ++E ++ Sbjct: 198 NRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 235 >gi|254670614|emb|CBA06589.1| polar amino acid transport system permease protein [Neisseria meningitidis alpha153] Length = 227 Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 90/218 (41%), Positives = 138/218 (63%), Gaps = 4/218 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM----HFYV 62 ++I+ +F ++ A V+LP+A SFVI ++I +A++RI + I I+ FY+ Sbjct: 7 DMIVSAFLPMVKAGFAVSLPLAAASFVIGMVIAVAVALVRIMPAGGIARKILLKLVEFYI 66 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTPLLVQL ++FYGLP +GI D A II +LN AY SE IR++I+S+PKGQW Sbjct: 67 SVIRGTPLLVQLVIVFYGLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQW 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A ++IG+T QT R I+ PQ + PLS+EFI + K+TS+A+ +T+ E+F+ AQ Sbjct: 127 EAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETA 186 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + TY L +Y E A VY ++IQ ++E ++ Sbjct: 187 NRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 224 >gi|269214286|ref|ZP_06158476.1| L-cystine ABC transporter, permease protein [Neisseria lactamica ATCC 23970] gi|269210117|gb|EEZ76572.1| L-cystine ABC transporter, permease protein [Neisseria lactamica ATCC 23970] Length = 227 Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 90/218 (41%), Positives = 139/218 (63%), Gaps = 4/218 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM----HFYV 62 ++I+ +F ++ A V+LP+A SFVI ++I +A++RI + I+ I+ FY+ Sbjct: 7 DMIVSAFLPMVKAGFAVSLPLAIASFVIGMMIAVAVALVRIMPAGGIVRKILLKLVEFYI 66 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTPLLVQL ++FYGLP +GI D A II +LN AY SE IR++I+S+PKGQW Sbjct: 67 SVIRGTPLLVQLVIVFYGLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQW 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A ++IG+T QT R I+ PQ + PLS+EFI + K+TS+A+ +T+ E+F+ AQ Sbjct: 127 EAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETA 186 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + TY L +Y E A VY ++IQ ++E ++ Sbjct: 187 NRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 224 >gi|313668732|ref|YP_004049016.1| amino acid permease integral membrane protein [Neisseria lactamica ST-640] gi|309379366|emb|CBX21933.1| unnamed protein product [Neisseria lactamica Y92-1009] gi|313006194|emb|CBN87656.1| putative amino acid permease integral membrane protein [Neisseria lactamica 020-06] gi|325134066|gb|EGC56721.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis M13399] Length = 238 Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 90/218 (41%), Positives = 139/218 (63%), Gaps = 4/218 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM----HFYV 62 ++I+ +F ++ A V+LP+A SFVI ++I +A++RI + I+ I+ FY+ Sbjct: 18 DMIVSAFLPMVKAGFAVSLPLAIASFVIGMMIAVAVALVRIMPAGGIVRKILLKLVEFYI 77 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTPLLVQL ++FYGLP +GI D A II +LN AY SE IR++I+S+PKGQW Sbjct: 78 SVIRGTPLLVQLVIVFYGLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQW 137 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A ++IG+T QT R I+ PQ + PLS+EFI + K+TS+A+ +T+ E+F+ AQ Sbjct: 138 EAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETA 197 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + TY L +Y E A VY ++IQ ++E ++ Sbjct: 198 NRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 235 >gi|15676686|ref|NP_273830.1| amino acid ABC transporter, permease protein [Neisseria meningitidis MC58] gi|7226020|gb|AAF41201.1| amino acid ABC transporter, permease protein [Neisseria meningitidis MC58] Length = 220 Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 90/217 (41%), Positives = 138/217 (63%), Gaps = 4/217 (1%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM----HFYVW 63 +I+ +F ++ A V+LP+A SFVI ++I +A++RI + I+ I+ FY+ Sbjct: 1 MIVSAFLPMVKAGFAVSLPLAAASFVIGMMIAVAVALVRIMPAGGIVRKILLKLVEFYIS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQL ++FYGLP +GI D A II +LN AY SE IR++I+S+PKGQW+ Sbjct: 61 VIRGTPLLVQLVIVFYGLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A ++IG+T QT R I+ PQ + PLS+EFI + K+TS+A+ +T+ E+F+ AQ + Sbjct: 121 AGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETAN 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TY L +Y E A VY ++IQ ++E ++ Sbjct: 181 RTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 217 >gi|199597030|ref|ZP_03210463.1| ABC-type amino acid transport system, permease component [Lactobacillus rhamnosus HN001] gi|199592163|gb|EDZ00237.1| ABC-type amino acid transport system, permease component [Lactobacillus rhamnosus HN001] Length = 237 Score = 184 bits (468), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 99/232 (42%), Positives = 147/232 (63%), Gaps = 12/232 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH----FY 61 + +I D+ PQ++ A I T+PIA +SF I LII A+ RI I+ I FY Sbjct: 2 WKVITDAVPQMIAAGIKYTIPIALVSFAIGLIIALVTALTRISVRKGILIRIAKGIAVFY 61 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 VW+FR TPLLVQLF++F+GLP + GI D A II+ +LN AY +E R+S Sbjct: 62 VWLFRSTPLLVQLFIVFFGLPSLIIPGIFPHGIKLDPAAAGIITFSLNTGAYCAETTRAS 121 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++SI GQW+A+YAIGL R+ +R II+PQ + T+ PLS+ FIS++K TS+A++ITI E Sbjct: 122 LLSIDSGQWEAAYAIGLPRRLVLREIIIPQALRTAIPPLSNSFISLIKDTSLAASITIVE 181 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +FQ +Q+I + YQPL++Y +A +Y I+ +F Q +E +++ + Sbjct: 182 MFQVSQQIAAENYQPLLMYSIVALLYAIVCTFLAWGQRYLEKFTSRYNANAQ 233 >gi|302024590|ref|ZP_07249801.1| amino-acid ABC transporter permease protein [Streptococcus suis 05HAS68] Length = 219 Score = 184 bits (468), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 90/218 (41%), Positives = 143/218 (65%), Gaps = 1/218 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + L++DSF Q+L ++VT+P+ +SF L+I A+++I I+ + F Sbjct: 1 MTERVWPLLLDSFSQILVPGLLVTIPLTILSFTFGLLIAIGTALVQIA-QIPILKQVARF 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+W+ RGTPLLVQL+VIF+GLP +GIV D+F + ++ ++N AY +E IR+SI S+PKG Sbjct: 60 YIWVVRGTPLLVQLYVIFFGLPSLGIVLDAFPSAVLVFSVNTGAYAAETIRASIESVPKG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A Y++G++ QT+R IILPQ + PLS+ I ++K TS+A+ IT+ E+F Q+ Sbjct: 120 QLEAGYSVGMSFAQTMRRIILPQAFRVAFPPLSNTLIGLVKDTSLAANITVLEMFMATQQ 179 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 I + TY+P +YCE+A VYL+ ++ +Q E + Sbjct: 180 IAARTYEPFALYCEVALVYLLFSTILTKLQAYGEKKLA 217 >gi|312112152|ref|YP_003990468.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. Y4.1MC1] gi|311217253|gb|ADP75857.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y4.1MC1] Length = 235 Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 95/205 (46%), Positives = 136/205 (66%), Gaps = 1/205 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L+ A+ T+P+ I+F I LI+ A+ RI + +I YV RGTPLLVQLF Sbjct: 29 LVKGALYYTIPLTVITFAIGLILAIATALARISGVKAL-EIIARIYVSAIRGTPLLVQLF 87 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +IFYGLP+IGI SF A II +LN AY SEI+R++I+SIPKGQW+A+Y++G+T Q Sbjct: 88 IIFYGLPNIGITIPSFPAAIIGFSLNVGAYASEIVRAAILSIPKGQWEAAYSLGMTTGQA 147 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R +I PQ + S PLS+ FIS++K TS+AS I + E+F+ AQ I ST Y+ L++Y E Sbjct: 148 LRRVIFPQAVRVSIPPLSNTFISLVKDTSLASLILVSEMFRKAQEIASTNYEFLLLYTEA 207 Query: 196 AFVYLILTSFCYIIQIKIESSVTQH 220 A +Y I+ I+Q +IE + ++ Sbjct: 208 AIIYWIICFLLSIVQNRIEERLNRY 232 >gi|269214011|ref|ZP_05983392.2| L-cystine ABC transporter, permease protein [Neisseria cinerea ATCC 14685] gi|269144798|gb|EEZ71216.1| L-cystine ABC transporter, permease protein [Neisseria cinerea ATCC 14685] Length = 227 Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 92/218 (42%), Positives = 138/218 (63%), Gaps = 4/218 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL----IMHFYV 62 +++I +F +L A V+LP+A SFVI +II +A++RI S I ++ FY+ Sbjct: 7 DMLISAFWPMLKAGFAVSLPLAIASFVIGMIIAVAVALVRIMPSGGIFQRCLLKLVEFYI 66 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTPLLVQL ++FYGLP +GI D A II +LN AY SE IR++I+S+PKGQW Sbjct: 67 SVIRGTPLLVQLVIVFYGLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQW 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A ++IG+T QT R I+ PQ + PLS+EFI + K+TS+A+ +T+ E+F+ AQ Sbjct: 127 EAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETA 186 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + TY L +Y E A VY ++IQ ++E ++ Sbjct: 187 NRTYDFLPVYIEAALVYWCFCKVLFLIQARLEERFDRY 224 >gi|148273811|ref|YP_001223372.1| putative polar amino acid ABC transporterpermease [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831741|emb|CAN02710.1| putative polar amino acid ABC transporter,permease component [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 221 Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 91/220 (41%), Positives = 146/220 (66%), Gaps = 2/220 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M EW +L SF L I T+P+A ++F + L I +A++R++ + ++S I F Sbjct: 1 MSREW-DLFWSSFGPLALETIRGTIPLALVTFALGLAIALGLALMRLY-GNRLVSGIARF 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + RGTPLLVQLFVIFYGLP IG+V + + +I+L++N Y +EIIR+SI+S+P+G Sbjct: 59 YISVVRGTPLLVQLFVIFYGLPSIGVVLPPWPSAVIALSVNVGGYAAEIIRASILSVPRG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A + IG++R T+R II+PQ S PLS+ FIS++K TS+AS I + E+F+ AQ Sbjct: 119 QWEAGHTIGMSRALTLRRIIVPQAARVSVPPLSNTFISLVKDTSLASVILVTELFKQAQL 178 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I S+T++ +++Y E A +Y ++ Q ++E + ++ Sbjct: 179 IASSTFEYMLLYLEAALIYWLVCLVLSFAQTRLERRLDRY 218 >gi|146319722|ref|YP_001199434.1| amino acid ABC transporter permease [Streptococcus suis 05ZYH33] gi|146321918|ref|YP_001201629.1| amino acid ABC transporter permease [Streptococcus suis 98HAH33] gi|253752712|ref|YP_003025853.1| amino-acid ABC transporter permease [Streptococcus suis SC84] gi|253754538|ref|YP_003027679.1| amino-acid ABC transporter permease [Streptococcus suis P1/7] gi|253756471|ref|YP_003029611.1| amino-acid ABC transporter permease [Streptococcus suis BM407] gi|145690528|gb|ABP91034.1| ABC-type amino acid transport system, permease component [Streptococcus suis 05ZYH33] gi|145692724|gb|ABP93229.1| ABC-type amino acid transport system, permease component [Streptococcus suis 98HAH33] gi|251817001|emb|CAZ52650.1| putative amino-acid ABC transporter permease protein [Streptococcus suis SC84] gi|251818935|emb|CAZ56778.1| putative amino-acid ABC transporter permease protein [Streptococcus suis BM407] gi|251820784|emb|CAR47546.1| putative amino-acid ABC transporter permease protein [Streptococcus suis P1/7] gi|292559333|gb|ADE32334.1| Amino acid ABC transporter, permease protein [Streptococcus suis GZ1] gi|319759128|gb|ADV71070.1| ABC-type amino acid transport system, permease component [Streptococcus suis JS14] Length = 219 Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 90/218 (41%), Positives = 142/218 (65%), Gaps = 1/218 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + L++DSF Q+L ++VT+P+ +SF L+I A+++I I+ + F Sbjct: 1 MTERVWQLLLDSFSQILVPGLLVTIPLTILSFTFGLLIAIGTALVQIA-QIPILKQVARF 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+W+ RGTPLLVQL+VIF+GLP +GIV D+F + ++ ++N AY +E IR+SI S+PKG Sbjct: 60 YIWVVRGTPLLVQLYVIFFGLPSLGIVLDAFPSAVLVFSVNTGAYAAETIRASIESVPKG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A Y++G++ QT+R IILPQ + PLS+ I ++K TS+A+ IT+ E+F Q+ Sbjct: 120 QLEAGYSVGMSFAQTMRRIILPQAFRVAFPPLSNTLIGLVKDTSLAANITVLEMFMATQQ 179 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 I + TY+P +YCE+A VYL ++ +Q E + Sbjct: 180 IAARTYEPFALYCEVALVYLFFSTILTKLQAYGEKKLA 217 >gi|241758722|ref|ZP_04756835.1| L-cystine transport system permease protein TcyB [Neisseria flavescens SK114] gi|241320930|gb|EER57143.1| L-cystine transport system permease protein TcyB [Neisseria flavescens SK114] Length = 238 Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 92/219 (42%), Positives = 139/219 (63%), Gaps = 6/219 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF-----FSDTIISLIMHFY 61 +++I +F ++ A V+LP+A SFVI +II +A++RI F ++ L+ FY Sbjct: 18 DMLISAFWPMVKAGFAVSLPLAIASFVIGMIIAVAVALVRIMPSGGIFQKCLLKLV-EFY 76 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + + RGTPLLVQL ++FYGLP IGI D A II +LN AY SE IR++I+S+PKGQ Sbjct: 77 ISVIRGTPLLVQLVIVFYGLPSIGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQ 136 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A ++IG+T QT R I+ PQ + PLS+EFI + K+TS+A+ +T+ E+F+ AQ Sbjct: 137 WEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQET 196 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + TY L +Y E A VY ++IQ ++E ++ Sbjct: 197 ANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 235 >gi|303257952|ref|ZP_07343961.1| amino acid ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|331000077|ref|ZP_08323772.1| ABC transporter, permease protein [Parasutterella excrementihominis YIT 11859] gi|302859295|gb|EFL82377.1| amino acid ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|329572961|gb|EGG54581.1| ABC transporter, permease protein [Parasutterella excrementihominis YIT 11859] Length = 222 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 87/215 (40%), Positives = 144/215 (66%), Gaps = 1/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +++D+FPQLL+ I VT+P+ ISF +S++I +A+I+ + ++ I FYVW+ Sbjct: 6 WQVMVDAFPQLLFKGITVTIPLTIISFALSMVIAVVVALIQ-YSKVPVLRQICRFYVWVI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQL+V+F+GLP IGI+ D+F+A +I ++N AY +E IR ++ S+P+GQ +A Sbjct: 65 RGTPLLVQLYVVFFGLPSIGIMVDAFLAAVIVFSINEGAYNAETIRGALESVPQGQMEAG 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GL Q + H++LPQ T+ L + IS++K TS+A+ IT+ E+F AQRI T Sbjct: 125 RCVGLNYFQIMWHVVLPQAFRTAFPALGNSMISMVKDTSLAANITVAEMFFQAQRIAGRT 184 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y+ + +Y E+A +YLI ++ +Q + E + ++ Sbjct: 185 YETMAVYIEVALIYLIFSTILEYLQRRGEKKLGKY 219 >gi|294497334|ref|YP_003561034.1| L-cystine import ABC transporter permease TcyB [Bacillus megaterium QM B1551] gi|294347271|gb|ADE67600.1| L-cystine import ABC transporter, permease protein TcyB [Bacillus megaterium QM B1551] Length = 234 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 95/205 (46%), Positives = 140/205 (68%), Gaps = 1/205 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L AI ++P+ I+FV+ +I+ A+ R+ S ++++I YV I RGTPLLVQLF Sbjct: 28 MLKGAIQYSIPLTLITFVLGIILAVLTALARLS-SIKVLNIIARIYVSIIRGTPLLVQLF 86 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +IFYGLP++ I D F++ II +L+ AY SEIIR++I SIPKGQW+A Y++G+T Q Sbjct: 87 IIFYGLPNLDITIDPFISAIIGFSLSVGAYASEIIRAAIQSIPKGQWEAGYSLGMTYSQA 146 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R IILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I ST Y+ L++Y E Sbjct: 147 LRRIILPQAARVSIPPLSNSFISLIKDTSLASLILVSEMFRKAQEIASTNYEFLLLYSEA 206 Query: 196 AFVYLILTSFCYIIQIKIESSVTQH 220 A +Y I+ + IIQ +IE + ++ Sbjct: 207 ALLYWIMCTILSIIQGRIEIRLDRY 231 >gi|295702707|ref|YP_003595782.1| L-cystine import ABC transporter permease TcyB [Bacillus megaterium DSM 319] gi|294800366|gb|ADF37432.1| L-cystine import ABC transporter, permease protein TcyB [Bacillus megaterium DSM 319] Length = 237 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 94/205 (45%), Positives = 140/205 (68%), Gaps = 1/205 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L AI ++P+ I+FV+ +I+ A+ R+ S ++++I YV I RGTPLLVQLF Sbjct: 31 MLKGAIQYSIPLTLITFVLGIILAVLTALARLS-SIKVLNIIARIYVSIIRGTPLLVQLF 89 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +IFYGLP++ I D F++ +I +L+ AY SEIIR++I SIPKGQW+A Y++G+T Q Sbjct: 90 IIFYGLPNLDITIDPFISAVIGFSLSVGAYASEIIRAAIQSIPKGQWEAGYSLGMTYSQA 149 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R IILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I ST Y+ L++Y E Sbjct: 150 LRRIILPQAARVSIPPLSNSFISLIKDTSLASLILVSEMFRKAQEIASTNYEFLLLYSEA 209 Query: 196 AFVYLILTSFCYIIQIKIESSVTQH 220 A +Y I+ + IIQ +IE + ++ Sbjct: 210 ALLYWIMCTILSIIQGRIEIRLDRY 234 >gi|227534279|ref|ZP_03964328.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188071|gb|EEI68138.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 237 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 97/232 (41%), Positives = 148/232 (63%), Gaps = 12/232 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLIMHFY 61 + ++ D+ PQ+ A I T+PIA +SF I LII A+ RI F T FY Sbjct: 2 WKIVADAVPQMAAAGIKYTIPIALVSFAIGLIIALITALTRISVRKGFWITFAKGFASFY 61 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 VW+FR TPLLVQLF++F+GLP + GI D VA II+ +LN AY +E IR++ Sbjct: 62 VWLFRSTPLLVQLFIVFFGLPSLIIPGIFPHGIKLDPVVAGIITFSLNTGAYCAETIRAA 121 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++SI GQW+A+Y++GL R+ +R II+PQ + T+ PLS+ FIS++K TS+A++ITI E Sbjct: 122 LLSIDHGQWEAAYSVGLPRRLVLREIIIPQALRTAVPPLSNSFISLVKDTSLAASITIVE 181 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +FQ +Q+I + YQPL++Y +A +Y ++ + Q +E +++T +V Sbjct: 182 MFQVSQQIAAENYQPLLMYSLVALLYAVVCTVLTWGQRYLEKVTSRYTSNVQ 233 >gi|295401072|ref|ZP_06811046.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] gi|294976865|gb|EFG52469.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] Length = 235 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 95/205 (46%), Positives = 135/205 (65%), Gaps = 1/205 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L+ A+ T+P+ I+F I LI+ A+ RI + +I YV RGTPLLVQLF Sbjct: 29 LVKGALYYTIPLTVITFAIGLILAIATALARISGVKAL-EIIARIYVSAIRGTPLLVQLF 87 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +IFYGLP+IGI SF A II +LN AY SEI+R++I+SIPKGQW+A+Y++G+T Q Sbjct: 88 IIFYGLPNIGITIPSFPAAIIGFSLNVGAYASEIVRAAILSIPKGQWEAAYSLGMTTGQA 147 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R +I PQ S PLS+ FIS++K TS+AS I + E+F+ AQ I ST Y+ L++Y E Sbjct: 148 LRRVIFPQAARVSIPPLSNTFISLVKDTSLASLILVSEMFRKAQEIASTNYEFLLLYTEA 207 Query: 196 AFVYLILTSFCYIIQIKIESSVTQH 220 A +Y I+ I+Q +IE + ++ Sbjct: 208 AIIYWIICFLLSIVQNRIEERLNRY 232 >gi|157371175|ref|YP_001479164.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157322939|gb|ABV42036.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 220 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 92/218 (42%), Positives = 143/218 (65%), Gaps = 2/218 (0%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 +E L +DS P LL AI+ TL ++ + L++GF +A++R+ +S + FYV Sbjct: 2 HESIQLALDSAPFLLKGAIL-TLQLSLGGMALGLMLGFLLALMRLS-PLWPLSWLSRFYV 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +FRGTPL+ QLF+I+YGLP GI FD F A +I L+LN +AY SE +R++I SI KGQW Sbjct: 60 SLFRGTPLIAQLFMIYYGLPQFGIEFDPFPAALIGLSLNTAAYTSETLRAAISSIEKGQW 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ +IG+TR QT+R +ILPQ T+ PL + FI ++K TS+A+TI +PE+F+ AQ I Sbjct: 120 EAAASIGMTRWQTLRRVILPQAARTALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLIT 179 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y ++ + +Q ++E+ V + Sbjct: 180 SRTLEVFTMYLAASLIYWVMATLLSALQNRLEAHVNRQ 217 >gi|228996156|ref|ZP_04155807.1| Amino acid ABC transporter [Bacillus mycoides Rock3-17] gi|228763606|gb|EEM12502.1| Amino acid ABC transporter [Bacillus mycoides Rock3-17] Length = 226 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 99/217 (45%), Positives = 139/217 (64%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +++ SF +L A+ T+P+ I+FVI +I+ F A+ RI S ++ I YV I Sbjct: 9 WIDIMQASFMPMLEGALFTTIPLTIITFVIGIILAIFTALARIS-SSRLLQWIARIYVSI 67 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP + I D + A II +LN AY SEIIR+SI+SIPKGQW+A Sbjct: 68 IRGTPLLVQLFIIFYGLPTLNIEIDPYPAAIIGFSLNVGAYASEIIRASILSIPKGQWEA 127 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y IG+T Q ++ IILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 128 AYTIGMTYPQALKRIILPQATRVSIPPLSNTFISLVKDTSLASLILVTELFRKAQEIAAM 187 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y+ LI+Y E +Y + I+Q +E ++T Sbjct: 188 NYEFLIVYFEAGLIYWAICFLLSIVQQILEKRSERYT 224 >gi|284800042|ref|ZP_05985523.2| L-cystine ABC transporter, permease protein [Neisseria subflava NJ9703] gi|284796209|gb|EFC51556.1| L-cystine ABC transporter, permease protein [Neisseria subflava NJ9703] Length = 227 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 91/219 (41%), Positives = 139/219 (63%), Gaps = 6/219 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF-----FSDTIISLIMHFY 61 +++I +F ++ A V+LP+A SFVI +II +A++RI F ++ L+ FY Sbjct: 7 DMLISAFWPMVKAGFAVSLPLAIASFVIGMIIAVAVALVRIMPSGGIFQKCLLKLV-EFY 65 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + + RGTPLLVQL ++FYGLP +GI D A II +LN AY SE IR++I+S+PKGQ Sbjct: 66 ISVIRGTPLLVQLVIVFYGLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQ 125 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A ++IG+T QT R I+ PQ + PLS+EFI + K+TS+A+ +T+ E+F+ AQ Sbjct: 126 WEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQET 185 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + TY L +Y E A VY ++IQ ++E ++ Sbjct: 186 ANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 224 >gi|258543772|ref|ZP_05704006.1| L-cystine ABC superfamily ATP binding cassette transporter, permease protein [Cardiobacterium hominis ATCC 15826] gi|258521008|gb|EEV89867.1| L-cystine ABC superfamily ATP binding cassette transporter, permease protein [Cardiobacterium hominis ATCC 15826] Length = 267 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 92/227 (40%), Positives = 145/227 (63%), Gaps = 10/227 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF----FSDTIISL 56 M L+ ++F +L AA++ ++P+A ++F+I LII +A++R+ + ++ Sbjct: 41 MSEARVTLVGNAFRPMLIAAVLYSIPLAVVAFIIGLIIALLVALVRVVPATGIAHRLLLA 100 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++H YV RGTP+LVQL ++FYGLP +GI D II +LN AY SE +R++I+S Sbjct: 101 VVHAYVSAIRGTPMLVQLMIVFYGLPAVGITLDPLPTAIIGFSLNVGAYASETVRAAILS 160 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQW+A + IG+T QT R IILPQ + S PLS+ FI + K TS+AST+TI E+F+ Sbjct: 161 VPRGQWEAGFTIGMTYLQTFRRIILPQALRVSVPPLSNSFIGLFKETSLASTVTITELFR 220 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCY---IIQIKIESSVTQH 220 AQ+I + +Y L +Y E A VY I FC+ + Q ++E + ++ Sbjct: 221 AAQQIANASYDFLPVYIEAALVYWI---FCFGLSLAQSRLERRLDRY 264 >gi|255327588|ref|ZP_05368654.1| L-cystine transport system permease protein TcyB [Rothia mucilaginosa ATCC 25296] gi|255295262|gb|EET74613.1| L-cystine transport system permease protein TcyB [Rothia mucilaginosa ATCC 25296] Length = 224 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 85/223 (38%), Positives = 148/223 (66%), Gaps = 3/223 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-FFSDTIISLIMHFYV 62 + NL +S PQLL + + VT+P++ ISF ++L++G A R F+ ++ + Y+ Sbjct: 3 RYLNLWAESLPQLLGSTLAVTIPLSLISFALALLVGIVSAGARTSRFAP--VNWLAWLYI 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 W+FRGTPLLVQLF++FYGLP +GI D + A II+++L+ AY++E RS++ +IP+GQ+ Sbjct: 61 WVFRGTPLLVQLFIVFYGLPKVGIALDVWSAAIITMSLHTGAYVAETFRSAVAAIPRGQF 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ + TR QT+RH+++PQ + + L + FI ++K TS+ S I++ ++FQT ++I Sbjct: 121 EAAATLNFTRMQTLRHVVIPQAVRIALPNLGNNFIDLIKGTSLVSVISMVDLFQTGKQIA 180 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 S T++PL +Y E+A +YL++ + Q +E ++ S + Sbjct: 181 SRTFEPLAMYSEVAIIYLVIFTLLTAAQSALEKYSNRYVRSNN 223 >gi|191637481|ref|YP_001986647.1| ABC-type amino acid transport system, permease component [Lactobacillus casei BL23] gi|239629529|ref|ZP_04672560.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|190711783|emb|CAQ65789.1| ABC-type amino acid transport system, permease component [Lactobacillus casei BL23] gi|239528215|gb|EEQ67216.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|327381526|gb|AEA53002.1| Polar amino acid ABC transporter, inner membrane subunit [Lactobacillus casei LC2W] gi|327384689|gb|AEA56163.1| Polar amino acid ABC transporter, inner membrane subunit [Lactobacillus casei BD-II] Length = 237 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 97/232 (41%), Positives = 148/232 (63%), Gaps = 12/232 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLIMHFY 61 + ++ D+ PQ+ A I T+PIA +SF I LII A+ RI F T FY Sbjct: 2 WKIVADAVPQMAAAGIKYTIPIALVSFAIGLIIALITALTRISVRKGFWITFAKGFASFY 61 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 VW+FR TPLLVQLF++F+GLP + GI D VA II+ +LN AY +E IR++ Sbjct: 62 VWLFRSTPLLVQLFIVFFGLPSLIIPGIFPHGIKLDPVVAGIITFSLNTGAYCAETIRAA 121 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++SI GQW+A+Y++GL R+ +R II+PQ + T+ PLS+ FIS++K TS+A++ITI E Sbjct: 122 LLSIDHGQWEAAYSVGLPRRLVLREIIIPQALRTAVPPLSNSFISLVKDTSLAASITIVE 181 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +FQ +Q+I + YQPL++Y +A +Y ++ + Q +E +++T +V Sbjct: 182 MFQVSQQIAAENYQPLLMYSLVALLYAVVCTALTWGQRYLEKVTSRYTSNVQ 233 >gi|42780022|ref|NP_977269.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|42735940|gb|AAS39877.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] Length = 234 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 95/217 (43%), Positives = 139/217 (64%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +++ SF +L A+ T+P+ I+F+I LI+ A+ RI S I+ I YV I Sbjct: 17 WMDIMQSSFMPMLKEAVFTTIPLTLITFIIGLILATLTALARISGSR-ILQWIARIYVSI 75 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP + I + + A ++ +LN AY SEIIR+SI+SIPKGQW+A Sbjct: 76 IRGTPLLVQLFIIFYGLPTLNIEVEPYTAAVVGFSLNVGAYASEIIRASILSIPKGQWEA 135 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y IG+T Q ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 136 AYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAM 195 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y+ LI+Y E +Y ++ I+Q +E ++T Sbjct: 196 NYEFLIVYFEAGLIYWVICFLLSIVQQMLEKRSERYT 232 >gi|167895469|ref|ZP_02482871.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 7894] gi|167920093|ref|ZP_02507184.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei BCC215] gi|254196113|ref|ZP_04902538.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei S13] gi|169652857|gb|EDS85550.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei S13] Length = 219 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 142/212 (66%), Gaps = 2/212 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 + F+L++ + P L A +T+ A S V+ LI+G +A++RI S+ ++S I YV Sbjct: 2 QAFDLVVHTLPVLAKGA-ALTMKFAVASMVLGLIVGLLVALVRIG-SNRLLSAIAQGYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQ+FV++YGLP IGI D A I++LTLN AY+SE +R +I+ I +GQW Sbjct: 60 LMRGTPLLVQMFVVYYGLPDIGISLDPTAAGILTLTLNAGAYLSESMRGAILGIGRGQWA 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AS+++GLT QT+RH+I PQ + + L + IS++K TS+ S IT+ E+ ++ Q +++ Sbjct: 120 ASHSLGLTHVQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIA 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +T+QPL +Y A +Y +L++ +Q +IE+ Sbjct: 180 STFQPLPLYLAAAAIYWVLSTLLARLQGRIET 211 >gi|126454206|ref|YP_001067296.1| polar amino acid ABC transporter permease [Burkholderia pseudomallei 1106a] gi|167825402|ref|ZP_02456873.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 9] gi|226193854|ref|ZP_03789456.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237813419|ref|YP_002897870.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei MSHR346] gi|242317625|ref|ZP_04816641.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 1106b] gi|254191836|ref|ZP_04898339.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|126227848|gb|ABN91388.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 1106a] gi|157939507|gb|EDO95177.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|225934159|gb|EEH30144.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237506596|gb|ACQ98914.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei MSHR346] gi|242140864|gb|EES27266.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 1106b] Length = 219 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 142/212 (66%), Gaps = 2/212 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 + F+L++ + P L A V+T+ A S V+ LI+G +A++RI S+ ++S I YV Sbjct: 2 QAFDLVVHTLPVLAKGA-VLTMKFAVASMVLGLIVGLLVALVRIG-SNRLLSAIAQGYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQ+FV++YGLP IGI D A I +LTLN AY+SE +R +I+ I +GQW Sbjct: 60 LMRGTPLLVQMFVVYYGLPDIGISLDPTAAGIFTLTLNAGAYLSESMRGAILGIGRGQWA 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AS+++GLT QT+RH+I PQ + + L + IS++K TS+ S IT+ E+ ++ Q +++ Sbjct: 120 ASHSLGLTHVQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIA 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +T+QPL +Y A +Y +L++ +Q +IE+ Sbjct: 180 STFQPLPLYLAAAAIYWVLSTLLARLQGRIET 211 >gi|154175001|ref|YP_001409167.1| putative ABC transporter permease protein [Campylobacter curvus 525.92] gi|112802173|gb|EAT99517.1| putative ABC transporter, permease protein [Campylobacter curvus 525.92] Length = 228 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 87/205 (42%), Positives = 140/205 (68%), Gaps = 1/205 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L A + VT+P+ ISF L+I A+ R+ + I+ I YVWIFRGTP+LVQLF Sbjct: 24 MLDALVKVTIPLTLISFACGLVIAIITAIARLS-NFKILKFIFGAYVWIFRGTPMLVQLF 82 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +IF+GLP +G+ D++ A II+ +LN AY SE +R+SI+S+PKGQW+A+ ++G++ Q Sbjct: 83 IIFFGLPAVGVTLDTWSAAIIAFSLNVGAYASESVRASILSVPKGQWEAATSLGMSHAQI 142 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 + II PQ + S PLS+ FI ++K TS+A++IT+ ++F AQRI + T++PL++Y Sbjct: 143 LHRIIAPQAVRISLPPLSNTFIGLVKDTSLAASITMVDMFMVAQRIAARTFEPLVLYVLA 202 Query: 196 AFVYLILTSFCYIIQIKIESSVTQH 220 A +YL++ + +Q K+E +++ Sbjct: 203 ALIYLVVCTLLTFLQAKLEKYTSRY 227 >gi|167563744|ref|ZP_02356660.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia oklahomensis EO147] Length = 219 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 142/212 (66%), Gaps = 2/212 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E F+L++ + P L A V+TL A S V+ LI+G +A++RI ++ I+S + YV Sbjct: 2 EAFDLVVHTLPVLAKGA-VLTLKFAVASMVLGLIVGLVVAIVRIG-NNRILSAVAQGYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQ+FV++YGLP IGI D A I +LTLN AY+SE +R +I+ I +GQW Sbjct: 60 LMRGTPLLVQMFVVYYGLPDIGISLDPTSAGIFTLTLNAGAYLSESMRGAILGIGRGQWA 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AS+++GLT QT+RH++ PQ + + L + IS++K TS+ S IT+ E+ ++ Q +++ Sbjct: 120 ASHSLGLTHVQTLRHVVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIA 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +T+QPL +Y A +Y +L++ +Q +IE+ Sbjct: 180 STFQPLPLYLAAAAIYWVLSTLLARLQGRIET 211 >gi|148543531|ref|YP_001270901.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri DSM 20016] gi|184152937|ref|YP_001841278.1| ABC transporter permease component [Lactobacillus reuteri JCM 1112] gi|227363514|ref|ZP_03847634.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus reuteri MM2-3] gi|227545192|ref|ZP_03975241.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus reuteri CF48-3A] gi|300909131|ref|ZP_07126592.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] gi|325681879|ref|ZP_08161397.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] gi|148530565|gb|ABQ82564.1| amino acid ABC transporter membrane protein, PAAT family [Lactobacillus reuteri DSM 20016] gi|183224281|dbj|BAG24798.1| ABC transporter permease component [Lactobacillus reuteri JCM 1112] gi|227071451|gb|EEI09754.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus reuteri MM2-3] gi|227184838|gb|EEI64909.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus reuteri CF48-3A] gi|300892996|gb|EFK86355.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] gi|324978523|gb|EGC15472.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] Length = 233 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 100/232 (43%), Positives = 144/232 (62%), Gaps = 11/232 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYV 62 + +I S PQLL A T+P+A ISF LII A+IR+ I+ I FYV Sbjct: 2 WEIIKTSLPQLLAAGFKYTIPLAIISFFFGLIIALVTALIRLSRQRGAFMILKWIASFYV 61 Query: 63 WIFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 W+FR TPLLVQLF++F+GLP++ GI + F A II+ +LN AY SE IR++I Sbjct: 62 WLFRSTPLLVQLFIVFFGLPYLRIKGVLPHGIKLEPFTAGIITFSLNTGAYASETIRAAI 121 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+P GQW+A AIG+TR Q + IILPQ + + PLS+ FIS++K TS+A++ITI E+ Sbjct: 122 SSVPTGQWEAGAAIGMTRLQILWRIILPQALRVALPPLSNSFISLVKDTSLAASITIMEM 181 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 F +Q+I + YQPL++Y +A VY + T+ Q +E V + + ++ Sbjct: 182 FAVSQQIAAENYQPLLMYTLVAMVYAVFTTVLSYFQGYLERVVDRQVNANNR 233 >gi|296840926|ref|ZP_06863806.2| L-cystine ABC transporter, permease protein [Neisseria polysaccharea ATCC 43768] gi|296839593|gb|EFH23531.1| L-cystine ABC transporter, permease protein [Neisseria polysaccharea ATCC 43768] Length = 227 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 90/218 (41%), Positives = 138/218 (63%), Gaps = 4/218 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM----HFYV 62 ++I+ +F ++ A V+LP+A SFVI +II +A++RI + I+ I+ FY+ Sbjct: 7 DMIVSAFLPMVKAGFAVSLPLAAASFVIGMIIAVAVALVRIMPAGGIVRKILLKLVEFYI 66 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTPLLVQL ++FYGLP +GI D A II +LN AY SE I ++I+S+PKGQW Sbjct: 67 SVIRGTPLLVQLVIVFYGLPSVGIYIDPIPAAIIGFSLNVGAYASETICAAILSVPKGQW 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A ++IG+T QT R I+ PQ + PLS+EFI + K+TS+A+ +T+ E+F+ AQ Sbjct: 127 EAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETA 186 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + TY L +Y E A VY ++IQ ++E ++ Sbjct: 187 NRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 224 >gi|167570892|ref|ZP_02363766.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia oklahomensis C6786] Length = 219 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 142/212 (66%), Gaps = 2/212 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E F+L++ + P L A V+TL A S V+ LI+G +A++RI ++ I+S + YV Sbjct: 2 EAFDLVVHTLPVLAKGA-VLTLKFAVASMVLGLIVGLVVAIVRIG-NNRILSAVAQGYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQ+FV++YGLP IGI D A I +LTLN AY+SE +R +I+ I +GQW Sbjct: 60 LMRGTPLLVQMFVVYYGLPDIGISLDPTSAGIFTLTLNAGAYLSESMRGAILGIGRGQWA 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AS+++GLT QT+RH++ PQ + + L + IS++K TS+ S IT+ E+ ++ Q +++ Sbjct: 120 ASHSLGLTHVQTLRHVVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIA 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +T+QPL +Y A +Y +L++ +Q +IE+ Sbjct: 180 STFQPLPLYLAAAAIYWVLSTLLARLQGRIET 211 >gi|254804666|ref|YP_003082887.1| polar amino acid transport system permease protein [Neisseria meningitidis alpha14] gi|254668208|emb|CBA04964.1| polar amino acid transport system permease protein [Neisseria meningitidis alpha14] Length = 227 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 89/218 (40%), Positives = 138/218 (63%), Gaps = 4/218 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM----HFYV 62 ++I+ +F ++ A V+LP+A SFVI ++I +A++RI + I+ I+ FY+ Sbjct: 7 DMIVSAFLPMVKAGFAVSLPLAAASFVIGMMIAVAVALVRIMPAGGIVRKILLKLVEFYI 66 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTPLLVQL ++FYGLP +GI A II +LN AY SE IR++I+S+PKGQW Sbjct: 67 SVIRGTPLLVQLVIVFYGLPSVGIYIAPIPAAIIGFSLNVGAYASETIRAAILSVPKGQW 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A ++IG+T QT R I+ PQ + PLS+EFI + K+TS+A+ +T+ E+F+ AQ Sbjct: 127 EAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETA 186 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + TY L +Y E A VY ++IQ ++E ++ Sbjct: 187 NRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 224 >gi|194468075|ref|ZP_03074061.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] gi|194452928|gb|EDX41826.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] Length = 233 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 100/232 (43%), Positives = 144/232 (62%), Gaps = 11/232 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYV 62 + +I S PQLL A T+P+A ISF LII A+IR+ I+ I FYV Sbjct: 2 WEIIKTSLPQLLAAGFKYTIPLAIISFFFGLIIALVTALIRLSRQRGAFMILKWIASFYV 61 Query: 63 WIFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 W+FR TPLLVQLF++F+GLP++ GI + F A II+ +LN AY SE IR++I Sbjct: 62 WLFRSTPLLVQLFIVFFGLPYLRIKGVLPHGIKLEPFTAGIITFSLNTGAYASETIRAAI 121 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+P GQW+A AIG+TR Q + IILPQ + + PLS+ FIS++K TS+A++ITI E+ Sbjct: 122 GSVPTGQWEAGAAIGMTRLQILWRIILPQALRVALPPLSNSFISLVKDTSLAASITIMEM 181 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 F +Q+I + YQPL++Y +A VY + T+ Q +E V + + ++ Sbjct: 182 FAVSQQIAAENYQPLLMYTLVAMVYAVFTTILSYFQGYLERVVDRQVNANNR 233 >gi|313123036|ref|YP_004033295.1| ABC amino acid transporter permease [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279599|gb|ADQ60318.1| ABC-type amino acid transport system, permease component [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325684798|gb|EGD26950.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 247 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 97/228 (42%), Positives = 145/228 (63%), Gaps = 15/228 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-----IISLIMHFYVWIF 65 D PQ+ A T+ +A ISF++ LII A++RI SD II I FYVW+F Sbjct: 19 DYLPQIFAAGFKYTITLALISFILGLIIALVTALVRI--SDKGGGFLIIKAIFRFYVWLF 76 Query: 66 RGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 R TPLLVQLF++++GLP++ GI F A II+ +LN AY SE IR++I S+ Sbjct: 77 RSTPLLVQLFIVYFGLPYLKIPGLLPNGIKLAPFTAGIITFSLNTGAYASETIRAAIQSV 136 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P+ QW+A+ +IG+ R +T+R IILPQ + S PLS+ FI ++K TS+A++ITI E+F+ Sbjct: 137 PREQWEAAASIGMNRGKTLRRIILPQALKVSIPPLSNSFIGLVKDTSLAASITIVEMFEV 196 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +Q+I + YQPLI+Y +A VY + S +Q +E + ++H+ + Sbjct: 197 SQQIAAENYQPLIMYSLVALVYALFCSVLSWLQGWLEKASSRHSKESE 244 >gi|283458861|ref|YP_003363507.1| amino acid ABC transporter permease [Rothia mucilaginosa DY-18] gi|283134922|dbj|BAI65687.1| ABC-type amino acid transport system, permease component [Rothia mucilaginosa DY-18] Length = 224 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 85/223 (38%), Positives = 148/223 (66%), Gaps = 3/223 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-FFSDTIISLIMHFYV 62 + NL +S PQLL + + VT+P++ ISF ++L++G A R F+ ++ + Y+ Sbjct: 3 RYLNLWAESLPQLLGSTLAVTIPLSLISFAVALLVGIVSAGARTSRFAP--VNWLAWVYI 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 W+FRGTPLLVQLF++FYGLP +GI D + A II+++L+ AY++E RS++ +IP+GQ+ Sbjct: 61 WVFRGTPLLVQLFIVFYGLPKVGIALDVWSAAIITMSLHTGAYVAETFRSAVAAIPRGQF 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ + TR QT+RH+++PQ + + L + FI ++K TS+ S I++ ++FQT ++I Sbjct: 121 EAAATLNFTRMQTLRHVVIPQAVRIALPNLGNNFIDLIKGTSLVSVISMVDLFQTGKQIA 180 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 S T++PL +Y E+A +YL++ + Q +E ++ S + Sbjct: 181 SRTFEPLAMYSEVAIIYLVIFTLLTAAQSALEKYSNRYVRSNN 223 >gi|157165284|ref|YP_001466153.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Campylobacter concisus 13826] gi|112800385|gb|EAT97729.1| L-cystine transport system permease protein TcyB [Campylobacter concisus 13826] Length = 222 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 86/202 (42%), Positives = 141/202 (69%), Gaps = 1/202 (0%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A + VT+P+ +SF + L+I A+ R+ + I+ I YVWIFRGTPLLVQLF++F Sbjct: 21 ALLKVTIPLTLLSFSLGLVIAIITAIARLS-NIKILKFIFATYVWIFRGTPLLVQLFIVF 79 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 YGLP +G+ D++ A I+ +LN AY SE +R++I+S+PKGQW+A+ ++G+T Q ++ Sbjct: 80 YGLPSLGVTLDTWSAATIAFSLNVGAYASESVRAAILSVPKGQWEAATSLGMTHYQILKR 139 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 II PQ + S PLS+ FI ++K TS+A++IT+ ++F AQRI + T++PLI+Y A + Sbjct: 140 IIAPQAVRISLPPLSNTFIGLVKDTSLAASITMVDMFMVAQRIAARTFEPLILYILAALI 199 Query: 199 YLILTSFCYIIQIKIESSVTQH 220 YL++ + +Q ++E +V+++ Sbjct: 200 YLVVCTLLTYLQSRLEKAVSRY 221 >gi|9929260|emb|CAC05299.1| putative transmembrane protein [Lactobacillus reuteri] Length = 233 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 100/232 (43%), Positives = 144/232 (62%), Gaps = 11/232 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYV 62 + +I S PQLL A T+P+A ISF+ LII A+IR+ I+ I FYV Sbjct: 2 WEIIKTSLPQLLAAGFKYTIPLAIISFLFGLIIALVTALIRLSRQRGAFMILKWIASFYV 61 Query: 63 WIFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 W+FR TPLLVQLF++F+GLP++ GI + F A II+ +LN AY SE IR++I Sbjct: 62 WLFRSTPLLVQLFIVFFGLPYLRIKGVLPHGIKLEPFTAGIITFSLNTGAYASETIRAAI 121 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+P GQW+A AIG+TR Q + IILPQ + + PLS+ FIS++K TS+A++ITI E+ Sbjct: 122 SSVPTGQWEAGAAIGMTRLQILWRIILPQALRVALPPLSNSFISLVKDTSLAASITIMEM 181 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 F +Q+I + YQPL++Y +A VY T+ Q +E V + + ++ Sbjct: 182 FAVSQQIAAENYQPLLMYTLVAMVYAAFTTILSYFQGYLERVVDRQVNANNR 233 >gi|225075327|ref|ZP_03718526.1| hypothetical protein NEIFLAOT_00330 [Neisseria flavescens NRL30031/H210] gi|224953502|gb|EEG34711.1| hypothetical protein NEIFLAOT_00330 [Neisseria flavescens NRL30031/H210] Length = 238 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 90/219 (41%), Positives = 138/219 (63%), Gaps = 6/219 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF-----FSDTIISLIMHFY 61 ++I+ +F ++ A V+LP+A SF I +II +A++RI F ++ L+ FY Sbjct: 18 DMIVSAFLPMVKAGFAVSLPLAIASFAIGMIIAVAVALVRIMPSGGIFQKCLLKLV-EFY 76 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + + RGTPLLVQL ++FYGLP +GI D A II +LN AY SE IR++I+S+PKGQ Sbjct: 77 ISVIRGTPLLVQLVIVFYGLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQ 136 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A ++IG+T QT R I+ PQ + PLS+EFI + K+TS+A+ +T+ E+F+ AQ Sbjct: 137 WEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQET 196 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + TY L +Y E A VY ++IQ ++E ++ Sbjct: 197 ANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 235 >gi|116494154|ref|YP_805888.1| ABC-type amino acid transport system, permease component [Lactobacillus casei ATCC 334] gi|116104304|gb|ABJ69446.1| amino acid ABC transporter membrane protein, PAAT family [Lactobacillus casei ATCC 334] Length = 237 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 96/232 (41%), Positives = 148/232 (63%), Gaps = 12/232 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLIMHFY 61 + ++ D+ PQ+ A I T+PIA +SF I LII A+ RI F T FY Sbjct: 2 WKIVADAVPQMAAAGIKYTIPIALVSFAIGLIIALITALTRISVRKGFWITFAKGFASFY 61 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 VW+FR TPLLVQLF++F+GLP + GI D +A II+ +LN AY +E IR++ Sbjct: 62 VWLFRSTPLLVQLFIVFFGLPSLIIPGIFPHGIKLDPVIAGIITFSLNTGAYCAETIRAA 121 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++SI GQW+A+Y++GL R+ +R II+PQ + T+ PLS+ FIS++K TS+A++ITI E Sbjct: 122 LLSIDHGQWEAAYSVGLPRRLVLREIIIPQALRTAVPPLSNSFISLVKDTSLAASITIVE 181 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +FQ +Q+I + YQPL++Y +A +Y ++ + Q +E +++T +V Sbjct: 182 MFQVSQQIAAENYQPLLMYSLVALLYAVVCTVLTWGQRYLEKVTSRYTSNVQ 233 >gi|222094600|ref|YP_002528660.1| amino acid ABC transporter , permease protein [Bacillus cereus Q1] gi|221238658|gb|ACM11368.1| amino acid ABC transporter, permease protein [Bacillus cereus Q1] Length = 235 Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 95/217 (43%), Positives = 139/217 (64%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +++ SF +L A+ T+P+ I+F+I LI+ A+ RI S I+ I YV I Sbjct: 18 WLDIMQTSFMPMLKEAVFTTIPLTLITFIIGLILATLTALARISGSR-ILQWIARIYVSI 76 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP + I + + A ++ +LN AY SEIIR+SI+SIPKGQW+A Sbjct: 77 IRGTPLLVQLFIIFYGLPTLNIEVEPYTAAVVGFSLNVGAYASEIIRASILSIPKGQWEA 136 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y IG+T Q ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 137 AYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAM 196 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y+ LI+Y E +Y ++ I+Q +E ++T Sbjct: 197 NYEFLIVYFEAGLIYWVICFLLSIVQQMLEKRSERYT 233 >gi|298369020|ref|ZP_06980338.1| L-cystine ABC transporter, permease protein [Neisseria sp. oral taxon 014 str. F0314] gi|298283023|gb|EFI24510.1| L-cystine ABC transporter, permease protein [Neisseria sp. oral taxon 014 str. F0314] Length = 238 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 89/218 (40%), Positives = 140/218 (64%), Gaps = 4/218 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL----IMHFYV 62 ++I+ +F ++ A +V+LP+A SF+I ++I +A++RI S I+ ++ Y+ Sbjct: 18 DMIVSAFLPMVKAGFMVSLPLAVASFLIGMVIAIAVALVRIMPSGGIVRKTLLKLVETYI 77 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I RGTPLLVQL ++FYGLP +GI D A II +LN AY SE IR++I+S+PKGQW Sbjct: 78 SIIRGTPLLVQLVIVFYGLPSVGIFIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQW 137 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A ++IG+T QT R I+ PQ + PLS+EFI + K+TS+A+ +T+ E+F+ AQ Sbjct: 138 EAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETA 197 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + TY L +Y E A VY ++IQ ++E+ ++ Sbjct: 198 NRTYDFLPVYIEAALVYWCFCKVLFLIQARLENRFDRY 235 >gi|325125097|gb|ADY84427.1| Amino acid ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 247 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 97/228 (42%), Positives = 145/228 (63%), Gaps = 15/228 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-----IISLIMHFYVWIF 65 D PQ+ A T+ +A ISF++ LII A++RI SD II I FYVW+F Sbjct: 19 DYLPQIFAAGFKYTITLAIISFILGLIIALVTALVRI--SDKGGGFLIIKAIFRFYVWLF 76 Query: 66 RGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 R TPLLVQLF++++GLP++ GI F A II+ +LN AY SE IR++I S+ Sbjct: 77 RSTPLLVQLFIVYFGLPYLKIPGLLPNGIKLAPFTAGIITFSLNTGAYASETIRAAIQSV 136 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P+ QW+A+ +IG+ R +T+R IILPQ + S PLS+ FI ++K TS+A++ITI E+F+ Sbjct: 137 PREQWEAAASIGMNRGKTLRRIILPQALKVSIPPLSNSFIGLVKDTSLAASITIVEMFEV 196 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +Q+I + YQPLI+Y +A VY + S +Q +E + ++H+ + Sbjct: 197 SQQIAAENYQPLIMYSLVALVYALFCSVLSWLQGWLEKASSRHSKESE 244 >gi|288575665|ref|ZP_05977394.2| L-cystine ABC transporter, permease protein [Neisseria mucosa ATCC 25996] gi|288567449|gb|EFC89009.1| L-cystine ABC transporter, permease protein [Neisseria mucosa ATCC 25996] Length = 227 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 89/218 (40%), Positives = 139/218 (63%), Gaps = 4/218 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM----HFYV 62 ++I+ +F ++ A +V+LP+A SF+I ++I +A++RI + I+ I+ Y+ Sbjct: 7 DMIVSAFLPMVKAGFMVSLPLAVASFLIGMVIAIAVALVRIMPAGGIVRKILLKLVETYI 66 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I RGTPLLVQL ++FYGLP +GI D A II +LN AY SE IR++I+S+PKGQW Sbjct: 67 SIIRGTPLLVQLVIVFYGLPSVGIFIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQW 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A ++IG+T QT R I+ PQ + PLS+EFI + K+TS+A+ +T+ E+F+ AQ Sbjct: 127 EAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETA 186 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + TY L +Y E A VY ++IQ ++E ++ Sbjct: 187 NRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 224 >gi|30260992|ref|NP_843369.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47777862|ref|YP_017493.2| amino acid ABC transporter permease [Bacillus anthracis str. 'Ames Ancestor'] gi|49183837|ref|YP_027089.1| amino acid ABC transporter permease [Bacillus anthracis str. Sterne] gi|167635893|ref|ZP_02394201.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|167638970|ref|ZP_02397244.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|170687533|ref|ZP_02878749.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|170708257|ref|ZP_02898702.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|177653846|ref|ZP_02935918.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|229602267|ref|YP_002865432.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] gi|30254441|gb|AAP24855.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47551567|gb|AAT29968.2| amino acid ABC transporter, permease protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49177764|gb|AAT53140.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Sterne] gi|167513100|gb|EDR88472.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|167528710|gb|EDR91469.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|170126778|gb|EDS95660.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|170668346|gb|EDT19093.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|172081074|gb|EDT66151.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|229266675|gb|ACQ48312.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] Length = 235 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 95/217 (43%), Positives = 139/217 (64%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +++ SF +L A+ T+P+ I+F+I LI+ A+ RI S I+ I YV I Sbjct: 18 WIDIMQTSFMPMLKEAVFTTIPLTLITFIIGLILATLTALARISGSR-ILQWIARIYVSI 76 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP + + + + A +I +LN AY SEIIR+SI+SIPKGQW+A Sbjct: 77 IRGTPLLVQLFIIFYGLPTLNVEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKGQWEA 136 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y IG+T Q ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 137 AYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAM 196 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y+ LI+Y E +Y ++ I+Q +E ++T Sbjct: 197 NYEFLIVYFEAGLIYWVICFLLSIVQQMLEKRSERYT 233 >gi|65318269|ref|ZP_00391228.1| COG0765: ABC-type amino acid transport system, permease component [Bacillus anthracis str. A2012] Length = 232 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 95/217 (43%), Positives = 139/217 (64%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +++ SF +L A+ T+P+ I+F+I LI+ A+ RI S I+ I YV I Sbjct: 15 WIDIMQTSFMPMLKEAVFTTIPLTLITFIIGLILATLTALARISGSR-ILQWIARIYVSI 73 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP + + + + A +I +LN AY SEIIR+SI+SIPKGQW+A Sbjct: 74 IRGTPLLVQLFIIFYGLPTLNVEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKGQWEA 133 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y IG+T Q ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 134 AYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAM 193 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y+ LI+Y E +Y ++ I+Q +E ++T Sbjct: 194 NYEFLIVYFEAGLIYWVICFLLSIVQQMLEKRSERYT 230 >gi|296501588|ref|YP_003663288.1| cystine transport system permease [Bacillus thuringiensis BMB171] gi|296322640|gb|ADH05568.1| cystine transport system permease protein [Bacillus thuringiensis BMB171] Length = 232 Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 95/217 (43%), Positives = 139/217 (64%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +++ SF +L A+ T+P+ I+F+I LI+ A+ RI S I+ I YV I Sbjct: 15 WIDIMQTSFMPMLKEAVFTTIPLTLITFIIGLILATLTALARISGSR-ILQWIARIYVSI 73 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP + I + + A ++ +LN AY SEIIR+SI+SIPKGQW+A Sbjct: 74 IRGTPLLVQLFIIFYGLPTLNIEVEPYTAAVVGFSLNVGAYASEIIRASILSIPKGQWEA 133 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y IG+T Q ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 134 AYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAM 193 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y+ LI+Y E +Y ++ I+Q +E ++T Sbjct: 194 NYEFLIVYFEAGLIYWVICFLLSIVQQMLEKRSERYT 230 >gi|15612734|ref|NP_241037.1| amino acid ABC transporter (permease) [Bacillus halodurans C-125] gi|10172783|dbj|BAB03890.1| amino acid ABC transporter (permease) [Bacillus halodurans C-125] Length = 233 Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 94/217 (43%), Positives = 138/217 (63%), Gaps = 1/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W + S LL A+ T+P+ ISF I L I A+ RI + ++ YV Sbjct: 15 RWITIAQSSLLPLLKGALYYTIPLTLISFTIGLFIAVLTALARIS-GVAPLKMVARVYVS 73 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I RGTPLLVQLF+IFYGLP IG+ D F A +I +LN AY SEIIR++I+SIPKGQW+ Sbjct: 74 IIRGTPLLVQLFIIFYGLPSIGVTIDPFPAAVIGFSLNVGAYASEIIRAAILSIPKGQWE 133 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG++ Q ++ I+LPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 134 AAYSIGMSYPQALKRIVLPQASRVSIPPLSNSFISLVKDTSLASLILVAEMFRRAQEIAA 193 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T Y+ L++Y + +Y I+ ++Q +IE+ + ++ Sbjct: 194 TNYEFLLLYAQAGAIYWIICFGLSLVQGRIENRLDRY 230 >gi|30019028|ref|NP_830659.1| cystine transport system permease protein [Bacillus cereus ATCC 14579] gi|29894570|gb|AAP07860.1| Cystine transport system permease protein [Bacillus cereus ATCC 14579] Length = 234 Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 95/217 (43%), Positives = 139/217 (64%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +++ SF +L A+ T+P+ I+F+I LI+ A+ RI S I+ I YV I Sbjct: 17 WIDIMQTSFMPMLKEAVFTTIPLTLITFIIGLILATLTALARISGSR-ILQWIARIYVSI 75 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP + I + + A ++ +LN AY SEIIR+SI+SIPKGQW+A Sbjct: 76 IRGTPLLVQLFIIFYGLPTLNIEVEPYTAAVVGFSLNVGAYASEIIRASILSIPKGQWEA 135 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y IG+T Q ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 136 AYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAM 195 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y+ LI+Y E +Y ++ I+Q +E ++T Sbjct: 196 NYEFLIVYFEAGLIYWVICFLLSIVQQMLEKRSERYT 232 >gi|332978666|gb|EGK15364.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Psychrobacter sp. 1501(2011)] Length = 245 Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 96/224 (42%), Positives = 144/224 (64%), Gaps = 4/224 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISL 56 M E ++I+SF +L AI ++P+A SF+I + I +A+IR+ + I Sbjct: 19 MSPERAQIVIESFWPMLKGAIYYSIPLAIASFIIGMGIALVVALIRVVPRNALWHKIAYR 78 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I YV RGTP+LVQLF+IFYGLP IGI+ + F A II+ +LN AY SE +R+SI+S Sbjct: 79 IARVYVSAIRGTPMLVQLFIIFYGLPSIGIMLEPFPAAIIAFSLNIGAYASETVRASILS 138 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQW+A +GL+ QT RH+ILPQ + S PLS+ FIS++K TS+AS I + E+F+ Sbjct: 139 IPKGQWEAGSTVGLSYLQTFRHVILPQALRVSVPPLSNTFISLVKDTSLASLILVTEMFK 198 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 AQ I + Y+ +++Y E A +Y ++ IQ ++E+ + ++ Sbjct: 199 QAQIITARNYEFMLVYTEAALIYWVICLALSTIQGRLETRLDRY 242 >gi|53725952|ref|YP_103705.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia mallei ATCC 23344] gi|67643969|ref|ZP_00442712.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei GB8 horse 4] gi|121601039|ref|YP_992121.1| polar amino acid ABC transporter permease [Burkholderia mallei SAVP1] gi|124386639|ref|YP_001028567.1| polar amino acid ABC transporter permease [Burkholderia mallei NCTC 10229] gi|126450004|ref|YP_001081536.1| polar amino acid ABC transporter permease [Burkholderia mallei NCTC 10247] gi|166998336|ref|ZP_02264196.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei PRL-20] gi|254175602|ref|ZP_04882262.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei ATCC 10399] gi|254202403|ref|ZP_04908766.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei FMH] gi|254207734|ref|ZP_04914084.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei JHU] gi|254356366|ref|ZP_04972642.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei 2002721280] gi|52429375|gb|AAU49968.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei ATCC 23344] gi|121229849|gb|ABM52367.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei SAVP1] gi|124294659|gb|ABN03928.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei NCTC 10229] gi|126242874|gb|ABO05967.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei NCTC 10247] gi|147746650|gb|EDK53727.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei FMH] gi|147751628|gb|EDK58695.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei JHU] gi|148025363|gb|EDK83517.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei 2002721280] gi|160696646|gb|EDP86616.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei ATCC 10399] gi|238525444|gb|EEP88872.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei GB8 horse 4] gi|243065405|gb|EES47591.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei PRL-20] Length = 219 Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 141/212 (66%), Gaps = 2/212 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 + F+L++ + P L A +T+ A S V+ LI+G +A++RI S+ ++S I YV Sbjct: 2 QAFDLVVHTLPVLAKGA-ALTMKFAVASMVLGLIVGLLVALVRIG-SNRLLSAIAQGYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQ+FV++YGLP IGI D A I +LTLN AY+SE +R +I+ I +GQW Sbjct: 60 LMRGTPLLVQMFVVYYGLPDIGISLDPTAAGIFTLTLNAGAYLSENMRGAILGIGRGQWA 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AS+++GLT QT+RH+I PQ + + L + IS++K TS+ S IT+ E+ ++ Q +++ Sbjct: 120 ASHSLGLTHVQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIA 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +T+QPL +Y A +Y +L++ +Q +IE+ Sbjct: 180 STFQPLPLYLAAAAIYWVLSTLLARLQGRIET 211 >gi|240117510|ref|ZP_04731572.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae PID1] gi|268603209|ref|ZP_06137376.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae PID1] gi|268587340|gb|EEZ52016.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae PID1] Length = 238 Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 90/219 (41%), Positives = 140/219 (63%), Gaps = 6/219 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF-----FSDTIISLIMHFY 61 +++I +F ++ A V+LP+A SFVI +II +A++RI F ++ L+ FY Sbjct: 18 DMLISAFWPMVKAGFTVSLPLAIASFVIGMIIAVAVALVRIMPSGGIFQKCLLKLV-EFY 76 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + + RGTPLLVQL ++FYGLP +GI + A II +LN AY SE IR++I+S+PKGQ Sbjct: 77 ISVVRGTPLLVQLVIVFYGLPSVGIYINPIPAAIIGFSLNVGAYASETIRAAILSVPKGQ 136 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A ++IG+T QT R I+ PQ + PLS+EFI + K+TS+A+ +T+ E+F+ AQ Sbjct: 137 WEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQET 196 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + TY L +Y E+A VY ++IQ ++E ++ Sbjct: 197 ANRTYDFLPVYIEVALVYWCFCKVLFLIQARLEKRFDRY 235 >gi|229084062|ref|ZP_04216355.1| Amino acid ABC transporter [Bacillus cereus Rock3-44] gi|228699239|gb|EEL51931.1| Amino acid ABC transporter [Bacillus cereus Rock3-44] Length = 214 Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 98/210 (46%), Positives = 138/210 (65%), Gaps = 1/210 (0%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 SF +L A+ T+P++ I+FVI +I+ F A+ RI S I+ I YV I RGTPLL Sbjct: 4 SFMPMLEGALFTTIPLSIITFVIGIILAIFTALARISNSR-ILQWIARIYVSIIRGTPLL 62 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 VQLF+IFYGLP + I D + A +I +LN AY SEIIR+SI+SIPKGQW+A+Y IG+T Sbjct: 63 VQLFIIFYGLPTLNIEIDPYPAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIGMT 122 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 Q ++ IILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I ++ Y+ LI+ Sbjct: 123 YPQALKRIILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAASNYEFLIV 182 Query: 192 YCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y E +Y ++ I+Q +E ++T Sbjct: 183 YFEAGLIYWVICFLLSIVQQILEKRSERYT 212 >gi|152974512|ref|YP_001374029.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023264|gb|ABS21034.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cytotoxicus NVH 391-98] Length = 232 Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 98/216 (45%), Positives = 139/216 (64%), Gaps = 1/216 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +++ SF +L AI T+P+ I+F+I LI+ A+ RI S I+ I YV I Sbjct: 15 WMDIMQASFMPMLKEAIFTTIPLTIITFIIGLILATLTALARISNSR-ILQWIARIYVSI 73 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP + I D + A +I +LN AY SEIIR+SI+SIPKGQW+A Sbjct: 74 IRGTPLLVQLFLIFYGLPTLQIEIDPYTAAVIGFSLNVGAYASEIIRASILSIPKGQWEA 133 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y +G+T Q ++ IILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 134 AYTMGMTYTQALKRIILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAM 193 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y+ LI+Y E A +Y ++ I+Q +E ++ Sbjct: 194 NYEFLIVYFEAALMYWVICFLLSIVQQILEKRTERY 229 >gi|53720226|ref|YP_109212.1| amino acid ABC transporter permease [Burkholderia pseudomallei K96243] gi|76809380|ref|YP_334465.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia pseudomallei 1710b] gi|126441781|ref|YP_001060017.1| polar amino acid ABC transporter permease [Burkholderia pseudomallei 668] gi|134280168|ref|ZP_01766879.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 305] gi|167739770|ref|ZP_02412544.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 14] gi|167816990|ref|ZP_02448670.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 91] gi|167846892|ref|ZP_02472400.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei B7210] gi|167912120|ref|ZP_02499211.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 112] gi|254180992|ref|ZP_04887590.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 1655] gi|254258358|ref|ZP_04949412.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 1710a] gi|254298887|ref|ZP_04966337.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 406e] gi|288553017|ref|ZP_03452533.2| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 576] gi|52210640|emb|CAH36624.1| putative ABC-family amino acid transporter, permease component [Burkholderia pseudomallei K96243] gi|76578833|gb|ABA48308.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 1710b] gi|126221274|gb|ABN84780.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 668] gi|134248175|gb|EBA48258.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 305] gi|157808749|gb|EDO85919.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 406e] gi|184211531|gb|EDU08574.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 1655] gi|254217047|gb|EET06431.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 1710a] gi|288279724|gb|EEC36457.2| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 576] Length = 219 Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 141/212 (66%), Gaps = 2/212 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 + F+L++ + P L A +T+ A S V+ LI+G +A++RI S+ ++S I YV Sbjct: 2 QAFDLVVHTLPVLAKGA-ALTMKFAVASMVLGLIVGLLVALVRIG-SNRLLSAIAQGYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQ+FV++YGLP IGI D A I +LTLN AY+SE +R +I+ I +GQW Sbjct: 60 LMRGTPLLVQMFVVYYGLPDIGISLDPTAAGIFTLTLNAGAYLSESMRGAILGIGRGQWA 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AS+++GLT QT+RH+I PQ + + L + IS++K TS+ S IT+ E+ ++ Q +++ Sbjct: 120 ASHSLGLTHVQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIA 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +T+QPL +Y A +Y +L++ +Q +IE+ Sbjct: 180 STFQPLPLYLAAAAIYWVLSTLLARLQGRIET 211 >gi|229016185|ref|ZP_04173137.1| Amino acid ABC transporter [Bacillus cereus AH1273] gi|229022421|ref|ZP_04178959.1| Amino acid ABC transporter [Bacillus cereus AH1272] gi|228738902|gb|EEL89360.1| Amino acid ABC transporter [Bacillus cereus AH1272] gi|228745139|gb|EEL95189.1| Amino acid ABC transporter [Bacillus cereus AH1273] Length = 225 Score = 181 bits (460), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 96/217 (44%), Positives = 139/217 (64%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +++ SF +L A+ T+P+ I+F+I +I+ A+ RI S I+ I YV I Sbjct: 8 WMDIMQTSFAPMLKEAVFTTIPLTLITFIIGIILATLTALARISGSR-ILQWIARIYVSI 66 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP + I + + A II +LN AY SEIIR+SI+SIPKGQW+A Sbjct: 67 IRGTPLLVQLFIIFYGLPTLNIEVEPYTAAIIGFSLNVGAYASEIIRASILSIPKGQWEA 126 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y IG+T Q ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 127 AYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAM 186 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y+ LI+Y E +Y ++ I+Q +E ++T Sbjct: 187 NYEFLIVYFEAGLIYWVICFLLSIVQQILEKRSERYT 223 >gi|49480129|ref|YP_035105.1| amino acid ABC transporter permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331685|gb|AAT62331.1| amino acid ABC transporter, permease [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 226 Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 94/217 (43%), Positives = 139/217 (64%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +++ SF +L A+ T+P+ I+F+I LI+ A+ RI S I+ I YV I Sbjct: 9 WIDIMQTSFMPMLKEAVFTTIPLTLITFIIGLILATLTALARISGSR-ILQWIARIYVSI 67 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP + + + + A ++ +LN AY SEIIR+SI+SIPKGQW+A Sbjct: 68 IRGTPLLVQLFIIFYGLPTLNVEVEPYTAAVVGFSLNVGAYASEIIRASILSIPKGQWEA 127 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y IG+T Q ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 128 AYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAM 187 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y+ LI+Y E +Y ++ I+Q +E ++T Sbjct: 188 NYEFLIVYFEAGLIYWVICFLLSIVQQMLEKRSERYT 224 >gi|163938764|ref|YP_001643648.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] gi|163860961|gb|ABY42020.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] Length = 232 Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 96/217 (44%), Positives = 139/217 (64%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +++ SF +L A+ T+P+ I+FVI +I+ A+ RI S I+ I YV I Sbjct: 15 WIDIMQTSFAPMLKEAVFTTIPLTLITFVIGIILATLTALARISGSR-ILQWIARIYVSI 73 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP + I + + A +I +LN AY SEIIR+SI+SIPKGQW+A Sbjct: 74 IRGTPLLVQLFIIFYGLPTLNIEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKGQWEA 133 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y IG+T Q ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 134 AYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAM 193 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y+ LI+Y E +Y ++ I+Q +E ++T Sbjct: 194 NYEFLIVYFEAGLIYWVICFLLSIVQQILEKRSERYT 230 >gi|116513461|ref|YP_812367.1| ABC-type amino acid transport system, permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092776|gb|ABJ57929.1| amino acid ABC transporter membrane protein, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 247 Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 96/228 (42%), Positives = 145/228 (63%), Gaps = 15/228 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-----IISLIMHFYVWIF 65 D PQ+ A T+ +A ISF++ L+I A++RI SD II I FYVW+F Sbjct: 19 DYLPQIFAAGFKYTITLAIISFILGLVIALVTALVRI--SDKGGGFLIIKAIFRFYVWLF 76 Query: 66 RGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 R TPLLVQLF++++GLP++ GI F A II+ +LN AY SE IR++I S+ Sbjct: 77 RSTPLLVQLFIVYFGLPYLKIPGLLPNGIKLAPFTAGIITFSLNTGAYASETIRAAIQSV 136 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P+ QW+A+ +IG+ R +T+R IILPQ + S PLS+ FI ++K TS+A++ITI E+F+ Sbjct: 137 PREQWEAAASIGMNRGKTLRRIILPQALKVSIPPLSNSFIGLVKDTSLAASITIVEMFEV 196 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +Q+I + YQPLI+Y +A VY + S +Q +E + ++H+ + Sbjct: 197 SQQIAAENYQPLIMYSLVALVYALFCSVLSWLQGWLEKASSRHSKESE 244 >gi|255066834|ref|ZP_05318689.1| L-cystine ABC transporter, permease protein [Neisseria sicca ATCC 29256] gi|255048909|gb|EET44373.1| L-cystine ABC transporter, permease protein [Neisseria sicca ATCC 29256] Length = 227 Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 90/218 (41%), Positives = 138/218 (63%), Gaps = 4/218 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM----HFYV 62 ++I+ +F ++ A +V+LP+A SF+I ++I +A++RI S I+ I+ Y+ Sbjct: 7 DMIVSAFLPMVKAGFMVSLPLAVASFLIGMVIAIAVALVRIMPSGGIVRKILLKLVETYI 66 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I RGTPLLVQL ++FYGLP +GI D A II +LN AY SE IR++I+S+PKGQW Sbjct: 67 SIIRGTPLLVQLVIVFYGLPSVGIFIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQW 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A ++IG+T QT R I+ PQ + PLS+EFI + K+TS+A+ +T+ E+F+ AQ Sbjct: 127 EAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETA 186 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + TY L +Y E A VY ++IQ +E ++ Sbjct: 187 NRTYDFLPVYIEAALVYWCFCKVLFLIQAHLEKRFDRY 224 >gi|261866998|ref|YP_003254920.1| glutamine-binding periplasmic protein/glutamine transport system permease [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412330|gb|ACX81701.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Aggregatibacter actinomycetemcomitans D11S-1] Length = 240 Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 97/224 (43%), Positives = 139/224 (62%), Gaps = 4/224 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----ISL 56 M E N I +F +L AAI T+P+A ISF L+I +AVIR +I + L Sbjct: 14 MNAERANEAISAFWPMLEAAIDKTIPLAIISFFAGLVIALGVAVIRTMPKSSIGLLVLQL 73 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV I RGTP+LVQ+F+IFYGLP +GI D F II+ ++N AY SE IR++I+S Sbjct: 74 LCRIYVSIIRGTPMLVQIFIIFYGLPEVGIKLDPFPTAIIAFSINIGAYASETIRAAILS 133 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQW+ASY+IG+ QT I+PQ + S PLS+ FIS +K TS+AS + + E+F+ Sbjct: 134 IPKGQWEASYSIGMNYFQTFTRTIMPQALRVSVPPLSNTFISNVKDTSLASLVLVTEMFR 193 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 AQ I + Y+ ++IY E A +Y + Q ++E +++H Sbjct: 194 VAQNITAENYEFIMIYSEAALIYWCICLVLSFAQERLEKRLSRH 237 >gi|52144470|ref|YP_082358.1| amino acid ABC transporter, permease [Bacillus cereus E33L] gi|301052511|ref|YP_003790722.1| amino acid ABC transporter permease [Bacillus anthracis CI] gi|51977939|gb|AAU19489.1| amino acid ABC transporter, permease [Bacillus cereus E33L] gi|300374680|gb|ADK03584.1| amino acid ABC transporter, permease [Bacillus cereus biovar anthracis str. CI] Length = 232 Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 94/217 (43%), Positives = 139/217 (64%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +++ SF +L A+ T+P+ I+F+I LI+ A+ RI S I+ I YV I Sbjct: 15 WIDIMQTSFMPMLKEAVFTTIPLTLITFIIGLILATLTALARISGSR-ILQWIARIYVSI 73 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP + + + + A ++ +LN AY SEIIR+SI+SIPKGQW+A Sbjct: 74 IRGTPLLVQLFIIFYGLPTLNVEVEPYTAAVVGFSLNVGAYASEIIRASILSIPKGQWEA 133 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y IG+T Q ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 134 AYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAM 193 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y+ LI+Y E +Y ++ I+Q +E ++T Sbjct: 194 NYEFLIVYFEAGLIYWVICFLLSIVQQMLEKRSERYT 230 >gi|167903853|ref|ZP_02491058.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei NCTC 13177] Length = 219 Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 141/212 (66%), Gaps = 2/212 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 + F+L++ + P L A +T+ A S V+ LI+G +A++RI S+ ++S I YV Sbjct: 2 QAFDLVVHTLPVLAKGA-ALTMKFAVASMVLGLIVGLLVALVRIG-SNRLLSAIAQGYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQ+FV++YGLP IGI D A I +LTLN AY+SE +R +I+ I +GQW Sbjct: 60 LMRGTPLLVQMFVVYYGLPDIGISLDPTAAGIFTLTLNAGAYLSESMRGAILGIGRGQWA 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AS+++GLT QT+RH+I PQ + + L + IS++K TS+ S IT+ E+ ++ Q +++ Sbjct: 120 ASHSLGLTHVQTLRHVICPQALCLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIA 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +T+QPL +Y A +Y +L++ +Q +IE+ Sbjct: 180 STFQPLPLYLAAAAIYWVLSTLLARLQGRIET 211 >gi|296110805|ref|YP_003621186.1| amino acid ABC transporter, permease protein [Leuconostoc kimchii IMSNU 11154] gi|295832336|gb|ADG40217.1| amino acid ABC transporter, permease protein [Leuconostoc kimchii IMSNU 11154] Length = 237 Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 92/224 (41%), Positives = 145/224 (64%), Gaps = 9/224 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISL 56 + +I+DS PQ+L A + T+ ++ +SF+ LII +A++R + I + Sbjct: 2 WKIIVDSTPQILLAGLQYTVTLSILSFIFGLIIATIVALLRREQPRQQGMTYILWRITNS 61 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ FYVW+FR TPLLVQLF+IFYGLP GI +F A +I+ +LN AY SE +R+++ S Sbjct: 62 VLRFYVWLFRSTPLLVQLFIIFYGLPSAGIQIGAFPAAVITFSLNVGAYASETVRAALDS 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+ QW+A+ +GL+R+QTI II PQ I + PLS+EFI ++K TS+ASTITI E+F Sbjct: 122 VPQAQWEAAATLGLSRRQTIFEIIFPQAIRIALPPLSNEFIGLVKDTSLASTITIVEMFA 181 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Q+I + YQPL++Y +A +Y ++ +Q +E +++ Sbjct: 182 ITQQITAKNYQPLLMYSIVAVIYAFFSTILVFLQKYLEKRTSRY 225 >gi|75761726|ref|ZP_00741667.1| Cystine transport system permease protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74490780|gb|EAO54055.1| Cystine transport system permease protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 234 Score = 181 bits (459), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 94/217 (43%), Positives = 139/217 (64%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +++ SF +L A+ T+P+ I+F+I +I+ A+ RI S I+ I YV I Sbjct: 17 WIDIMQSSFMPMLKEAVFTTIPLTLITFIIGIILATLTALARISGSR-ILQWIARIYVSI 75 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP + I + + A ++ +LN AY SEIIR+SI+SIPKGQW+A Sbjct: 76 IRGTPLLVQLFIIFYGLPTLNIEVEPYTAAVVGFSLNVGAYASEIIRASILSIPKGQWEA 135 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y IG+T Q ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 136 AYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAM 195 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y+ LI+Y E +Y ++ I+Q +E ++T Sbjct: 196 NYEFLIVYFEAGLIYWVICFLLSIVQQMLEKRSERYT 232 >gi|118476507|ref|YP_893658.1| amino acid ABC transporter permease [Bacillus thuringiensis str. Al Hakam] gi|225862824|ref|YP_002748202.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB102] gi|118415732|gb|ABK84151.1| amino acid ABC transporter membrane protein, PAAT family [Bacillus thuringiensis str. Al Hakam] gi|225788606|gb|ACO28823.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB102] Length = 234 Score = 181 bits (459), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 94/217 (43%), Positives = 139/217 (64%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +++ SF +L A+ T+P+ I+F+I +I+ A+ RI S I+ I YV I Sbjct: 17 WIDIMQSSFMPMLKEAVFTTIPLTLITFIIGIILATLTALARISGSR-ILQWIARIYVSI 75 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP + + + + A +I +LN AY SEIIR+SI+SIPKGQW+A Sbjct: 76 IRGTPLLVQLFIIFYGLPTLNVEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKGQWEA 135 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y IG+T Q ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 136 AYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAM 195 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y+ LI+Y E +Y ++ I+Q +E ++T Sbjct: 196 NYEFLIVYFEAGLIYWVICFLLSIVQQMLEKRSERYT 232 >gi|59800817|ref|YP_207529.1| putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae FA 1090] gi|194098108|ref|YP_002001156.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae NCCP11945] gi|239998564|ref|ZP_04718488.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae 35/02] gi|240013689|ref|ZP_04720602.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae DGI18] gi|240016129|ref|ZP_04722669.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae FA6140] gi|240080271|ref|ZP_04724814.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae FA19] gi|240112483|ref|ZP_04726973.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae MS11] gi|240115223|ref|ZP_04729285.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae PID18] gi|240120758|ref|ZP_04733720.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae PID24-1] gi|240123064|ref|ZP_04736020.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae PID332] gi|240125316|ref|ZP_04738202.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae SK-92-679] gi|240127768|ref|ZP_04740429.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae SK-93-1035] gi|254493285|ref|ZP_05106456.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae 1291] gi|260440959|ref|ZP_05794775.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae DGI2] gi|268594423|ref|ZP_06128590.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae 35/02] gi|268596420|ref|ZP_06130587.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae FA19] gi|268598550|ref|ZP_06132717.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae MS11] gi|268600903|ref|ZP_06135070.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae PID18] gi|268681690|ref|ZP_06148552.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae PID332] gi|268683917|ref|ZP_06150779.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae SK-92-679] gi|268686160|ref|ZP_06153022.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae SK-93-1035] gi|291044287|ref|ZP_06569996.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae DGI2] gi|293399479|ref|ZP_06643632.1| polar amino acid transport system permease [Neisseria gonorrhoeae F62] gi|59717712|gb|AAW89117.1| putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae FA 1090] gi|193933398|gb|ACF29222.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae NCCP11945] gi|226512325|gb|EEH61670.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae 1291] gi|268547812|gb|EEZ43230.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae 35/02] gi|268550208|gb|EEZ45227.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae FA19] gi|268582681|gb|EEZ47357.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae MS11] gi|268585034|gb|EEZ49710.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae PID18] gi|268621974|gb|EEZ54374.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae PID332] gi|268624201|gb|EEZ56601.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae SK-92-679] gi|268626444|gb|EEZ58844.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae SK-93-1035] gi|291011181|gb|EFE03177.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae DGI2] gi|291610048|gb|EFF39170.1| polar amino acid transport system permease [Neisseria gonorrhoeae F62] gi|317163839|gb|ADV07380.1| putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae TCDC-NG08107] Length = 238 Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 90/219 (41%), Positives = 139/219 (63%), Gaps = 6/219 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF-----FSDTIISLIMHFY 61 +++I +F ++ A V+LP+A SFVI +II +A++RI F ++ L+ FY Sbjct: 18 DMLISAFWPMVKAGFTVSLPLAIASFVIGMIIAVAVALVRIMPSGGIFQKCLLKLV-EFY 76 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + + RGTPLLVQL ++FYGLP +GI + A II +LN AY SE IR++I+S+PKGQ Sbjct: 77 ISVVRGTPLLVQLVIVFYGLPSVGIYINPIPAAIIGFSLNVGAYASETIRAAILSVPKGQ 136 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A ++IG+T QT R I+ PQ + PLS+EFI + K+TS+A+ +T+ E+F+ AQ Sbjct: 137 WEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQET 196 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + TY L +Y E A VY ++IQ ++E ++ Sbjct: 197 ANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 235 >gi|256848427|ref|ZP_05553869.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Lactobacillus coleohominis 101-4-CHN] gi|256714694|gb|EEU29673.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Lactobacillus coleohominis 101-4-CHN] Length = 231 Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 94/224 (41%), Positives = 147/224 (65%), Gaps = 9/224 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---------IISL 56 +++I + P++L+A I T+PIA ISF+I L+I A+I+ ++ Sbjct: 2 WDIIKSTTPEILWAGIKYTIPIAVISFIIGLVIAVITALIKTSKPRGNAVVKGLWQLLKA 61 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I FYVW+FR TPL+VQLF++FYGLP++G+ +++ A I + +LN AY SE IR++I S Sbjct: 62 IFSFYVWLFRSTPLIVQLFIVFYGLPNVGLQLNAWTAGICTFSLNTGAYASETIRAAISS 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+ QW+A+Y+IG+T +Q + II PQ + PLS+ FI ++K TS+ASTITI ++F Sbjct: 122 IPRSQWEAAYSIGMTYQQVLFKIIFPQAFRIAIPPLSNSFIGLVKDTSLASTITIADMFL 181 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +Q+I S YQPL++Y +A VY I S I+Q +E ++++ Sbjct: 182 VSQQIASHNYQPLLMYSIVAAVYAIFCSLLTILQYYMEKRLSRY 225 >gi|300119246|ref|ZP_07056940.1| amino acid ABC transporter, permease protein [Bacillus cereus SJ1] gi|298723354|gb|EFI64102.1| amino acid ABC transporter, permease protein [Bacillus cereus SJ1] Length = 232 Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 94/217 (43%), Positives = 139/217 (64%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +++ SF +L A+ T+P+ I+F+I +I+ A+ RI S I+ I YV I Sbjct: 15 WIDIMQSSFMPMLKEAVFTTIPLTLITFIIGIILATLTALARISGSR-ILQWIARIYVSI 73 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP + + + + A +I +LN AY SEIIR+SI+SIPKGQW+A Sbjct: 74 IRGTPLLVQLFIIFYGLPTLNVEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKGQWEA 133 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y IG+T Q ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 134 AYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAM 193 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y+ LI+Y E +Y ++ I+Q +E ++T Sbjct: 194 NYEFLIVYFEAGLIYWVICFLLSIVQQMLEKRSERYT 230 >gi|313115214|ref|ZP_07800698.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310622492|gb|EFQ05963.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 227 Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 83/217 (38%), Positives = 142/217 (65%), Gaps = 1/217 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +++ ++ P++L A + +T+P+ +SF ++II +A+++ + + ++ I FY+W+ R Sbjct: 12 SVLAEALPRILTAGLTMTIPLTLVSFFFAMIIAVAVALVQ-YANVPVLRQIARFYIWVIR 70 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQLF+IFYGLP +GI+ D+F A +I+ N AY +E +R ++ S+P+GQ +A Y Sbjct: 71 GTPLLVQLFIIFYGLPSVGIMLDAFPAAVIAFAFNEGAYCAETMRGALESVPQGQLEAGY 130 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +G++ Q +R I+LPQ + T+ LS+ I ++K TS+AS IT+ E+F QR+ + TY Sbjct: 131 CVGMSWWQIMRRIVLPQALRTAVPALSNSLIGMIKDTSLASNITVAELFMAGQRVAARTY 190 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 L IYCE+A VYL+ + +Q +E + H + Sbjct: 191 IFLPIYCEVAVVYLLFCTVITKLQALLERRLNAHGFQ 227 >gi|228963947|ref|ZP_04125082.1| Amino acid ABC transporter [Bacillus thuringiensis serovar sotto str. T04001] gi|228795798|gb|EEM43271.1| Amino acid ABC transporter [Bacillus thuringiensis serovar sotto str. T04001] Length = 226 Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 94/217 (43%), Positives = 139/217 (64%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +++ SF +L A+ T+P+ I+F+I +I+ A+ RI S I+ I YV I Sbjct: 9 WIDIMQSSFMPMLKEAVFTTIPLTLITFIIGIILATLTALARISGSR-ILQWIARIYVSI 67 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP + I + + A ++ +LN AY SEIIR+SI+SIPKGQW+A Sbjct: 68 IRGTPLLVQLFIIFYGLPTLNIEVEPYTAAVVGFSLNVGAYASEIIRASILSIPKGQWEA 127 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y IG+T Q ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 128 AYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAM 187 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y+ LI+Y E +Y ++ I+Q +E ++T Sbjct: 188 NYEFLIVYFEAGLIYWVICFLLSIVQQMLEKRSERYT 224 >gi|47564802|ref|ZP_00235846.1| amino acid ABC transporter, permease protein [Bacillus cereus G9241] gi|47558175|gb|EAL16499.1| amino acid ABC transporter, permease protein [Bacillus cereus G9241] Length = 226 Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 94/217 (43%), Positives = 139/217 (64%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +++ SF +L A+ T+P+ I+F+I +I+ A+ RI S I+ I YV I Sbjct: 9 WIDIMQSSFMPMLKEAVFTTIPLTLITFIIGIILATLTALARISGSR-ILQWIARIYVSI 67 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP + + + + A +I +LN AY SEIIR+SI+SIPKGQW+A Sbjct: 68 IRGTPLLVQLFIIFYGLPTLNVEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKGQWEA 127 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y IG+T Q ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 128 AYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAM 187 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y+ LI+Y E +Y ++ I+Q +E ++T Sbjct: 188 NYEFLIVYFEAGLIYWVICFLLSIVQQMLEKRSERYT 224 >gi|319638304|ref|ZP_07993067.1| amino acid permease integral membrane protein [Neisseria mucosa C102] gi|317400577|gb|EFV81235.1| amino acid permease integral membrane protein [Neisseria mucosa C102] Length = 238 Score = 181 bits (458), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 92/219 (42%), Positives = 138/219 (63%), Gaps = 6/219 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF-----FSDTIISLIMHFY 61 +++I +F ++ A V+LP+A SFVI +II +A++RI F ++ L+ FY Sbjct: 18 DMLISAFWPMVKAGFAVSLPLAIASFVIGMIIAVAVALVRIMPSGGIFQKCLLKLV-EFY 76 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + I RGTPLLVQL ++FYGLP + I D A II +LN AY SE IR++I+S+PKGQ Sbjct: 77 ISIIRGTPLLVQLVIVFYGLPSVSIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQ 136 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A ++IG+T QT R II PQ + PLS+EFI + K+TS+A+ +T+ E+F+ AQ Sbjct: 137 WEAGFSIGMTYMQTFRRIIAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQET 196 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + TY L +Y E A VY ++IQ ++E ++ Sbjct: 197 ANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 235 >gi|301065633|ref|YP_003787656.1| amino acid ABC transporter permease [Lactobacillus casei str. Zhang] gi|300438040|gb|ADK17806.1| ABC-type amino acid transport system, permease component [Lactobacillus casei str. Zhang] Length = 237 Score = 181 bits (458), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 97/232 (41%), Positives = 147/232 (63%), Gaps = 12/232 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLIMHFY 61 + ++ D+ PQ+ A I T+ IA +SF I LII A+ RI F T FY Sbjct: 2 WKIVADAVPQMAAAGIKYTISIALVSFAIGLIIALITALTRISVRKGFWITFAKGFASFY 61 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 VW+FR TPLLVQLF++F+GLP + GI D VA II+ +LN AY SE IR++ Sbjct: 62 VWLFRSTPLLVQLFIVFFGLPSLIIPGIFPHGIKLDPVVAGIITFSLNTGAYCSETIRAA 121 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++SI GQW+A+Y++GL R+ +R II+PQ + T+ PLS+ FIS++K TS+A++ITI E Sbjct: 122 LLSIDHGQWEAAYSVGLPRRLVLREIIIPQALRTAVPPLSNSFISLVKDTSLAASITIVE 181 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +FQ +Q+I + YQPL++Y +A +Y ++ + Q +E +++T +V Sbjct: 182 MFQVSQQIAAENYQPLLMYSLVALLYAVVCTVLTWGQRYLEKVTSRYTSNVQ 233 >gi|257438672|ref|ZP_05614427.1| L-cystine ABC transporter, permease protein [Faecalibacterium prausnitzii A2-165] gi|257198901|gb|EEU97185.1| L-cystine ABC transporter, permease protein [Faecalibacterium prausnitzii A2-165] Length = 227 Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 84/213 (39%), Positives = 140/213 (65%), Gaps = 1/213 (0%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 ++ P++L A + +T+P+ ISF ++++I +A+++ + + ++ I FY+W+ RGTPL Sbjct: 16 EALPRILTAGLTMTIPLTLISFSLAMVIAVAVALVQ-YANVPVLRQIARFYIWVIRGTPL 74 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LVQLF+IFYGLP +GI+ D+F A +I+ N AY +E +R ++ S+P+GQ +A +G+ Sbjct: 75 LVQLFIIFYGLPSLGIMLDAFPAAVIAFAFNEGAYCAETMRGALESVPQGQLEAGSCVGM 134 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T Q +R I+LPQ + T+ LS+ IS++K TS+AS IT+ E+F QR+ + TY L Sbjct: 135 TWWQIMRRIVLPQALRTAVPSLSNSLISMIKDTSLASNITVAELFMAGQRVAARTYIFLP 194 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 IYCE+A VYL+ + +Q +E + H + Sbjct: 195 IYCEVAVVYLLFCTIITKLQALVERQLNAHGFQ 227 >gi|228989959|ref|ZP_04149935.1| Amino acid ABC transporter [Bacillus pseudomycoides DSM 12442] gi|228769783|gb|EEM18370.1| Amino acid ABC transporter [Bacillus pseudomycoides DSM 12442] Length = 226 Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 98/217 (45%), Positives = 137/217 (63%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +++ SF +L A+ T+P+ I+F I LI+ A+ RI S ++ I YV I Sbjct: 9 WIDIMQASFMPMLEGALFTTIPLTLITFAIGLILATLTALARISGSR-LLQWIARIYVSI 67 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP + I D + A II +LN AY SEIIR+SI+SIPKGQW+A Sbjct: 68 IRGTPLLVQLFIIFYGLPTLKIEIDPYTAAIIGFSLNVGAYASEIIRASILSIPKGQWEA 127 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y IG+T Q ++ IILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 128 AYTIGMTYPQALKRIILPQATRVSIPPLSNTFISLVKDTSLASLILVTELFRKAQEIAAM 187 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y+ LI+Y E +Y + I+Q +E ++T Sbjct: 188 NYEFLIVYFEAGLIYWAICFLLSIVQQILEKRSERYT 224 >gi|229056620|ref|ZP_04196026.1| Amino acid ABC transporter [Bacillus cereus AH603] gi|228720689|gb|EEL72247.1| Amino acid ABC transporter [Bacillus cereus AH603] Length = 225 Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 95/217 (43%), Positives = 139/217 (64%), Gaps = 1/217 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +++ SF +L A+ T+P+ I+F+I +I+ A+ RI S I+ I YV I Sbjct: 8 WIDIMQTSFAPMLKEAVFTTIPLTLITFIIGIILATLTALARISGSR-ILQWIARIYVSI 66 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF+IFYGLP + I + + A +I +LN AY SEIIR+SI+SIPKGQW+A Sbjct: 67 IRGTPLLVQLFIIFYGLPTLNIEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKGQWEA 126 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y IG+T Q ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 127 AYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAM 186 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y+ LI+Y E +Y ++ I+Q +E ++T Sbjct: 187 NYEFLIVYFEAGLIYWVICFLLSIVQQILEKRSERYT 223 >gi|145638107|ref|ZP_01793717.1| ABC-type amino acid transport system permease component [Haemophilus influenzae PittII] gi|145272436|gb|EDK12343.1| ABC-type amino acid transport system permease component [Haemophilus influenzae PittII] gi|309751273|gb|ADO81257.1| L-cystine ABC transporter, permease component TcyB [Haemophilus influenzae R2866] Length = 238 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 97/227 (42%), Positives = 145/227 (63%), Gaps = 10/227 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----ISL 56 M E + +I SF +L AAI+ TLP+A ISF L+I +AVIR F S + + Sbjct: 14 MSAERADYVISSFWPMLEAAILYTLPLAVISFFCGLLIAVIVAVIRTFPSPNLPLKLLQA 73 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + Y+ I RGTP+LVQ+F+IFYGLP +GI + F II+ ++N AY +E +R+SII+ Sbjct: 74 LCRVYISIIRGTPMLVQIFIIFYGLPEVGITLEPFPTAIIAFSINIGAYAAETVRASIIA 133 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQW+ASYAIG+ +Q I+PQ + S LS+ FIS +K TS+AS + + E+F+ Sbjct: 134 IPKGQWEASYAIGMNYRQAFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFR 193 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYI---IQIKIESSVTQH 220 AQ I + Y+ ++IY E A +Y I FC++ +Q ++E +++H Sbjct: 194 VAQNITAANYEFILIYSEAALIYWI---FCFVLSFLQDRLEIRLSRH 237 >gi|308178341|ref|YP_003917747.1| L-cystine ABC transporter inner membrane subunit TcyB [Arthrobacter arilaitensis Re117] gi|307745804|emb|CBT76776.1| L-cystine ABC transporter, inner membrane subunit TcyB [Arthrobacter arilaitensis Re117] Length = 221 Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 92/220 (41%), Positives = 147/220 (66%), Gaps = 2/220 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W L++DS L AI T+P+A +S + L+I +A++RI + +IS I Sbjct: 1 MDSKW-QLLLDSLGPLALGAITATIPLALVSMALGLLIALLMALMRIS-KNRVISSIARV 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ I RGTPLLVQLFVIFYG+P +G+ D + + II+ +LN Y +EIIR++I+S+P+G Sbjct: 59 YISIIRGTPLLVQLFVIFYGMPSVGLTIDPWPSAIIAFSLNIGGYAAEIIRAAILSVPQG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A Y +G++R +T+ +ILPQ + PLS+ FIS++K TS+ASTI + E+F+ AQ Sbjct: 119 QWEAGYTLGMSRTRTLYRLILPQATRVAVPPLSNSFISLVKDTSLASTILVTEMFRKAQE 178 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I ++TY+ L++YCE A +Y ++ +Q +E + ++ Sbjct: 179 ITASTYEFLLLYCEAAAIYWVICLVLSALQNSVEGRLEKY 218 >gi|104779493|ref|YP_605991.1| amino acid ABC transporter permease [Pseudomonas entomophila L48] gi|95108480|emb|CAK13174.1| putative amino acid ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 222 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 99/223 (44%), Positives = 144/223 (64%), Gaps = 8/223 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAA-IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--I 57 M E L++DS P LL A V L + + F L++GF +A++R+ I+ L + Sbjct: 1 MIAESLQLVVDSVPFLLKGAGYTVLLSVGGMFF--GLVLGFALALMRL---SKILPLDWL 55 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 YV FRGTPLLVQLFVI++GLP IGI D A +I L+LN +AYI EI+R++I SI Sbjct: 56 ARIYVSFFRGTPLLVQLFVIYFGLPQIGIELDPIPASLIGLSLNMAAYICEILRAAISSI 115 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 +GQW+A+ +IG+TR Q +R ILPQ + T+ PL + FIS++K T++A+TI +PE+F+ Sbjct: 116 DRGQWEAAASIGMTRTQAMRRAILPQALRTALPPLGNSFISLVKDTALAATIQVPELFRQ 175 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 AQ I + T++ +Y +A VY IL S Q ++E+ V QH Sbjct: 176 AQLITARTFEVFTMYLAVAVVYWILCSILAHFQNRMEARVNQH 218 >gi|302671182|ref|YP_003831142.1| amino acid ABC transporter permease [Butyrivibrio proteoclasticus B316] gi|302395655|gb|ADL34560.1| amino acid ABC transporter permease protein [Butyrivibrio proteoclasticus B316] Length = 225 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 90/227 (39%), Positives = 149/227 (65%), Gaps = 3/227 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMH 59 M +I SF ++L I VT+P+ +SF +SL++G +A+I++ +D + + Sbjct: 1 MSERLIGIITSSFFKILIPGIKVTIPLTILSFALSLVVGLLLALIQV--ADIKGLRQLAR 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FY+W+FRGTPL+VQLF+IF+GLP+IGI ++F + +++ LN AY +E+ RS+I++IPK Sbjct: 59 FYIWVFRGTPLIVQLFIIFFGLPNIGITLNAFPSAVLAFGLNLGAYNAEVFRSAILAIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+Y IGL+ Q + +ILPQ+ + L + IS+LK T++AS+IT+ ++F TAQ Sbjct: 119 GQMEAAYMIGLSYPQAMIRVILPQSFPVAFPNLFNNLISLLKDTALASSITVIDLFTTAQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 +I + TY+P +Y E AF+YLI ++ +Q +E + + K Sbjct: 179 QIAARTYEPFALYLEAAFIYLIFSTALTWLQRYLEQKLVWKSSDKKK 225 >gi|229587810|ref|YP_002869929.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229359676|emb|CAY46524.1| putative ABC transport system, permease [Pseudomonas fluorescens SBW25] Length = 221 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 93/216 (43%), Positives = 140/216 (64%), Gaps = 4/216 (1%) Query: 6 FNLIIDSFPQLLYAAI-VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 F L +DS P LL A V L + + F L++GF +A++R+ ++S I YV Sbjct: 5 FQLALDSAPFLLKGAYYTVILSLGGMFF--GLVLGFGLALMRLS-RFKLVSWIARVYVSF 61 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRGTPLLVQLF+I+YGLP +GI D A +I +LN +AY EI+R++I SI +GQW+A Sbjct: 62 FRGTPLLVQLFLIYYGLPQVGIELDPIPAAMIGFSLNMAAYACEILRAAIASIERGQWEA 121 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + +IG+TR QT+R ILPQ + T+ PL + FIS++K T++A+TI +PE+F+ AQ + + Sbjct: 122 AASIGMTRAQTLRRAILPQAMRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLVSAR 181 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T++ +Y A +Y IL S +Q ++E V +H Sbjct: 182 TFEIFTMYLSAALIYWILASILAHLQNRLEDRVNRH 217 >gi|213691657|ref|YP_002322243.1| polar amino acid ABC transporter, inner membrane subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|317481626|ref|ZP_07940661.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bifidobacterium sp. 12_1_47BFAA] gi|213523118|gb|ACJ51865.1| polar amino acid ABC transporter, inner membrane subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|316916916|gb|EFV38303.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bifidobacterium sp. 12_1_47BFAA] gi|320457746|dbj|BAJ68367.1| putative amino acid ABC transporter permease component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 220 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 141/220 (64%), Gaps = 1/220 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + +++DSF +LL I VT+P+ ISF + LI+ +A++R+ + S I F Sbjct: 1 MDARVWGIVVDSFAKLLIPGITVTIPLTLISFALGLILAIVVALVRVA-KVPVASQIAWF 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+W+FRGTPLLVQLFVIF+GLP +GI + + +I+ +LN AY +E +R +I+++PKG Sbjct: 60 YIWVFRGTPLLVQLFVIFFGLPSVGITIPALPSAVIAFSLNVGAYAAETLRGAILAVPKG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A + +R IILPQ ++ L + FI+++K TS+A+ IT+ E+F TAQR Sbjct: 120 QLEAGLAANMPYVTIMRRIILPQAFRSAFPALFNSFIALVKDTSLAANITVVEMFMTAQR 179 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 IV+ Y+PL++Y E+ +YL+ + +Q E + +H Sbjct: 180 IVAIYYEPLVLYIEVGLIYLLFCTLLGWLQDYCEKKLNEH 219 >gi|93006751|ref|YP_581188.1| amino acid ABC transporter permease [Psychrobacter cryohalolentis K5] gi|92394429|gb|ABE75704.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Psychrobacter cryohalolentis K5] Length = 245 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 94/224 (41%), Positives = 142/224 (63%), Gaps = 4/224 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF----FSDTIISL 56 M + ++I SF +L I ++P+A ISF I + I +A+IRI + I+ Sbjct: 19 MSPDRAQIVISSFWPMLKGGIYYSIPLALISFAIGMAIALTVALIRIVPRAGWVHEIVYR 78 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV RGTP+LVQLF+IFYGLP +G+ D F + II+ +LN AY SE +R+SI+S Sbjct: 79 LARIYVSAIRGTPMLVQLFIIFYGLPSVGVKLDPFPSAIIAFSLNIGAYASETVRASILS 138 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQW+A +GLT QT RH+ILPQ + S PLS+ FIS++K TS+AS + + E+F+ Sbjct: 139 IPKGQWEAGSTVGLTYLQTFRHVILPQALRVSVPPLSNTFISLVKDTSLASLVLVTELFK 198 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 AQ I + Y+ +++Y E A +Y + F IQ ++E+ + ++ Sbjct: 199 QAQIITARNYEFMLVYIEAAVIYWGICLFLTFIQGRLETRLDRY 242 >gi|293391094|ref|ZP_06635428.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951628|gb|EFE01747.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 227 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 97/224 (43%), Positives = 138/224 (61%), Gaps = 4/224 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----ISL 56 M E N I +F +L AAI T+P+A ISF L+I +AVIR I + L Sbjct: 1 MNAERANEAISAFWPMLEAAIDKTIPLAIISFFAGLMIALGVAVIRTMPKSGIGLLVLQL 60 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV I RGTP+LVQ+F+IFYGLP +GI D F II+ ++N AY SE IR++I+S Sbjct: 61 LCRIYVSIIRGTPMLVQIFIIFYGLPEVGIKLDPFPTAIIAFSINIGAYASETIRAAILS 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQW+ASY+IG+ QT I+PQ + S PLS+ FIS +K TS+AS + + E+F+ Sbjct: 121 IPKGQWEASYSIGMNYFQTFIRTIMPQALRVSVPPLSNTFISNVKDTSLASLVLVTEMFR 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 AQ I + Y+ ++IY E A +Y + Q ++E +++H Sbjct: 181 VAQNITAENYEFIMIYSEAALIYWCICLVLSFAQERLEKRLSRH 224 >gi|170724143|ref|YP_001751831.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169762146|gb|ACA75462.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 222 Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 98/223 (43%), Positives = 144/223 (64%), Gaps = 8/223 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAA-IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--I 57 M E L++DS P LL A V L + + F L++GF +A++R+ I+ L + Sbjct: 1 MIAESLQLVVDSAPFLLKGAGYTVLLSVGGMFF--GLVLGFALALMRL---SKILPLDWL 55 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 YV FRGTPLLVQLFVI++G+P IGI D A +I L+LN +AYI EI+R++I SI Sbjct: 56 ARIYVSFFRGTPLLVQLFVIYFGMPQIGIELDPIPASLIGLSLNMAAYICEILRAAISSI 115 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 +GQW+A+ +IG+TR Q +R ILPQ + T+ PL + FIS++K T++A+TI +PE+F+ Sbjct: 116 DRGQWEAAASIGMTRTQAMRRAILPQALRTALPPLGNSFISLVKDTALAATIQVPELFRQ 175 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 AQ I + T++ +Y +A VY IL S Q ++E+ V QH Sbjct: 176 AQLITARTFEVFTMYLAVAVVYWILCSILAHFQNRMEARVNQH 218 >gi|311032512|ref|ZP_07710602.1| amino acid ABC transporter (permease) [Bacillus sp. m3-13] Length = 233 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 93/218 (42%), Positives = 141/218 (64%), Gaps = 3/218 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W + S LL A+ T+P+ +SF L+I +A+ RI + ++ YV Sbjct: 15 RWMTIAQSSLLPLLKGALSNTIPLTLLSFSFGLMIAILMALARIS-PIKPLQIVARIYVS 73 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I RGTPLLVQLF IFYGLP IG+ DSF A +I+ +LN AY SEIIR++I+S PKGQW+ Sbjct: 74 IIRGTPLLVQLFFIFYGLPSIGVTIDSFPAAVIAFSLNVGAYASEIIRAAILSTPKGQWE 133 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y++G++ Q +R IILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ+I + Sbjct: 134 AAYSMGMSYPQALRRIILPQAARVSIPPLSNSFISLVKDTSLASLILVTEMFRVAQQIAA 193 Query: 184 TTYQPLIIYCELAFVYLILTSFCY-IIQIKIESSVTQH 220 T Y+ L++Y + +Y ++ FC ++Q ++E + ++ Sbjct: 194 TNYEFLLLYAQAGAIYWVIC-FCLSLVQGRVERRLDRY 230 >gi|148652957|ref|YP_001280050.1| polar amino acid ABC transporter inner membrane subunit [Psychrobacter sp. PRwf-1] gi|148572041|gb|ABQ94100.1| polar amino acid ABC transporter, inner membrane subunit [Psychrobacter sp. PRwf-1] Length = 245 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 90/218 (41%), Positives = 142/218 (65%), Gaps = 4/218 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH----FYV 62 +++I SF +L AI ++P+A SF+I + I +A+IR+ + I + YV Sbjct: 25 DIVIQSFWPMLKGAIYYSIPLAIASFIIGMAIALVVALIRVVPRQALWHKIAYRLARIYV 84 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTP+LVQLF+IFYGLP +G++ + F A II+ +LN AY SE +R+SI+SIPKGQW Sbjct: 85 SAIRGTPMLVQLFIIFYGLPSVGVMLEPFPAAIIAFSLNIGAYASETVRASILSIPKGQW 144 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A +GLT Q+ RH+ILPQ + S PLS+ FIS++K TS+AS I + E+F+ AQ I Sbjct: 145 EAGATVGLTYLQSFRHVILPQALRVSVPPLSNTFISLVKDTSLASLILVTEMFKQAQIIT 204 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + Y+ +++Y E A +Y ++ +Q ++E+ + ++ Sbjct: 205 ARNYEFMLVYTEAALIYWVICLALSAVQGRLETRLDRY 242 >gi|68249636|ref|YP_248748.1| amino-acid ABC transporter permease protein [Haemophilus influenzae 86-028NP] gi|319897441|ref|YP_004135638.1| amino-acid abc transporter permease protein [Haemophilus influenzae F3031] gi|68057835|gb|AAX88088.1| probable amino-acid ABC transporter permease protein [Haemophilus influenzae 86-028NP] gi|317432947|emb|CBY81314.1| probable amino-acid ABC transporter permease protein [Haemophilus influenzae F3031] Length = 225 Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 96/227 (42%), Positives = 144/227 (63%), Gaps = 10/227 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----ISL 56 M E + +I SF +L AAI+ TLP+A ISF L+I +AVIR S + + Sbjct: 1 MSAERADYVISSFWPMLEAAILYTLPLAVISFFCGLLIAVIVAVIRTLPSPNLPLKLLQA 60 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + Y+ I RGTP+LVQ+F+IFYGLP +GI + F II+ ++N AY +E +R+SII+ Sbjct: 61 LCRVYISIIRGTPMLVQIFIIFYGLPEVGITLEPFPTAIIAFSINIGAYAAETVRASIIA 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQW+ASYAIG+ +Q I+PQ + S LS+ FIS +K TS+AS + + E+F+ Sbjct: 121 IPKGQWEASYAIGMNYRQAFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFR 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYI---IQIKIESSVTQH 220 AQ I + Y+ ++IY E A +Y I FC++ +Q ++E +++H Sbjct: 181 VAQNITAANYEFILIYSEAALIYWI---FCFVLSFLQDRLEIRLSRH 224 >gi|170718972|ref|YP_001783435.1| polar amino acid ABC transporter inner membrane subunit [Haemophilus somnus 2336] gi|168827101|gb|ACA32472.1| polar amino acid ABC transporter, inner membrane subunit [Haemophilus somnus 2336] Length = 243 Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 92/221 (41%), Positives = 145/221 (65%), Gaps = 10/221 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF----YV 62 L+I+ F ++ AA++V++P+A +SF++ ++I +A+IR+ S +II + F Y+ Sbjct: 23 ELVINGFFPMVKAAVLVSIPLAIVSFILGMVIAIAVALIRVSPSHSIIHRLFLFITKIYI 82 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I RGTP+LVQ+ ++FYGLP +GI D A II +LN AY SE +R++I S+PKGQW Sbjct: 83 SIIRGTPMLVQISIVFYGLPALGIFIDPIPAAIIGFSLNVGAYASETVRAAIQSVPKGQW 142 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A Y IG+T QT R II+PQ + PLS+ FIS+ K TS+AS +T+ E+F+ AQ++ Sbjct: 143 EAGYTIGMTYMQTFRRIIVPQAFRVAVPPLSNTFISLFKDTSLASVVTVTEMFRVAQQVA 202 Query: 183 STTYQPLIIYCELAFVYLILTSFCYII---QIKIESSVTQH 220 + +Y L +Y E A +Y FC+I+ Q +IE + ++ Sbjct: 203 NMSYDFLPVYIEAALIYW---CFCFILFLWQARIEKKLARY 240 >gi|269955927|ref|YP_003325716.1| polar amino acid ABC transporter inner membrane subunit [Xylanimonas cellulosilytica DSM 15894] gi|269304608|gb|ACZ30158.1| polar amino acid ABC transporter, inner membrane subunit [Xylanimonas cellulosilytica DSM 15894] Length = 217 Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 88/215 (40%), Positives = 141/215 (65%), Gaps = 1/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++L S L+ +V TLP++ SF I L+I IA++R+ + ++S + YV + Sbjct: 3 WDLFTSSLWPLVRGGLVGTLPLSLASFAIGLVIALGIALLRLS-THPVLSWLGRAYVSLI 61 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLFVIFYGLP IG+V D + + I++ +LN Y +E++R++I+S+P+GQW+A+ Sbjct: 62 RGTPLLVQLFVIFYGLPSIGVVIDPWPSAIVAFSLNVGGYAAEVMRAAILSVPQGQWEAA 121 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y IG+ R T+R ++LPQ S PLS+ FIS++K TS+AS I + E F+ AQ I + T Sbjct: 122 YTIGMRRTTTLRRVVLPQAARVSVPPLSNTFISLVKDTSLASLILVAEAFRAAQVIAAAT 181 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + +++Y ++A VY + + Q +IE + Q+ Sbjct: 182 SEFMLLYLQVALVYWLFCTVLSFGQGRIERKLEQY 216 >gi|113460357|ref|YP_718418.1| amino acid ABC transporter permease [Haemophilus somnus 129PT] gi|112822400|gb|ABI24489.1| amino acid ABC transporter membrane protein, PAAT family [Haemophilus somnus 129PT] Length = 238 Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 92/221 (41%), Positives = 145/221 (65%), Gaps = 10/221 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF----YV 62 L+I+ F ++ AA++V++P+A +SF++ ++I +A+IR+ S +II + F Y+ Sbjct: 18 ELVINGFFPMVKAAVLVSIPLAIVSFILGMVIAIAVALIRVSPSHSIIHRLFLFITKIYI 77 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I RGTP+LVQ+ ++FYGLP +GI D A II +LN AY SE +R++I S+PKGQW Sbjct: 78 SIIRGTPMLVQISIVFYGLPALGIFIDPIPAAIIGFSLNVGAYASETVRAAIQSVPKGQW 137 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A Y IG+T QT R II+PQ + PLS+ FIS+ K TS+AS +T+ E+F+ AQ++ Sbjct: 138 EAGYTIGMTYMQTFRRIIVPQAFRVAVPPLSNTFISLFKDTSLASVVTVTEMFRVAQQVA 197 Query: 183 STTYQPLIIYCELAFVYLILTSFCYII---QIKIESSVTQH 220 + +Y L +Y E A +Y FC+I+ Q +IE + ++ Sbjct: 198 NMSYDFLPVYIEAALIYW---CFCFILFLWQARIEKKLARY 235 >gi|145630170|ref|ZP_01785952.1| ABC-type amino acid transport system permease component [Haemophilus influenzae R3021] gi|145636469|ref|ZP_01792137.1| ABC-type amino acid transport system permease component [Haemophilus influenzae PittHH] gi|148828241|ref|YP_001292994.1| ABC-type amino acid transport system permease [Haemophilus influenzae PittGG] gi|260581868|ref|ZP_05849664.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus influenzae NT127] gi|144984451|gb|EDJ91874.1| ABC-type amino acid transport system permease component [Haemophilus influenzae R3021] gi|145270294|gb|EDK10229.1| ABC-type amino acid transport system permease component [Haemophilus influenzae PittHH] gi|148719483|gb|ABR00611.1| ABC-type amino acid transport system permease component [Haemophilus influenzae PittGG] gi|260095061|gb|EEW78953.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus influenzae NT127] gi|309973450|gb|ADO96651.1| L-cystine ABC transporter, permease component TcyB [Haemophilus influenzae R2846] Length = 238 Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 96/227 (42%), Positives = 144/227 (63%), Gaps = 10/227 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----ISL 56 M E + +I SF +L AAI+ TLP+A ISF L+I +AVIR S + + Sbjct: 14 MSAERADYVISSFWPMLEAAILYTLPLAVISFFCGLLIAVIVAVIRTLPSPNLPLKLLQA 73 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + Y+ I RGTP+LVQ+F+IFYGLP +GI + F II+ ++N AY +E +R+SII+ Sbjct: 74 LCRVYISIIRGTPMLVQIFIIFYGLPEVGITLEPFPTAIIAFSINIGAYAAETVRASIIA 133 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQW+ASYAIG+ +Q I+PQ + S LS+ FIS +K TS+AS + + E+F+ Sbjct: 134 IPKGQWEASYAIGMNYRQAFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFR 193 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYI---IQIKIESSVTQH 220 AQ I + Y+ ++IY E A +Y I FC++ +Q ++E +++H Sbjct: 194 VAQNITAANYEFILIYSEAALIYWI---FCFVLSFLQDRLEIRLSRH 237 >gi|296454519|ref|YP_003661662.1| polar amino acid ABC transporter inner membrane subunit [Bifidobacterium longum subsp. longum JDM301] gi|296183950|gb|ADH00832.1| polar amino acid ABC transporter, inner membrane subunit [Bifidobacterium longum subsp. longum JDM301] Length = 220 Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 140/220 (63%), Gaps = 1/220 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + +++DSF +LL I VT+P+ ISF + LI+ +A++R+ + S I F Sbjct: 1 MDARVWGIVVDSFAKLLIPGITVTIPLTLISFALGLILAIVVALVRVA-KVPVASQIAWF 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+W+FRGTPLLVQLFVIF+GLP +GI + + +I+ +LN AY +E +R +I+++PKG Sbjct: 60 YIWVFRGTPLLVQLFVIFFGLPSVGITIPALPSAVIAFSLNVGAYAAETLRGAILAVPKG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A + +R IILPQ ++ L + FI+++K TS+A+ IT+ E+F TAQR Sbjct: 120 QLEAGLAANMPYVTIMRRIILPQAFRSAFPALFNSFIALVKDTSLAANITVVEMFMTAQR 179 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 IV+ Y+PL +Y E+ +YL+ + +Q E + +H Sbjct: 180 IVAIYYEPLALYIEVGLIYLLFCTLLGWLQDYCEKKLNEH 219 >gi|301169820|emb|CBW29424.1| predicted transporter subunit: membrane component of ABC superfamily [Haemophilus influenzae 10810] Length = 225 Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 95/227 (41%), Positives = 144/227 (63%), Gaps = 10/227 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----ISL 56 M E + +I SF +L AAI+ TLP+A ISF L+I +AVIR S + + Sbjct: 1 MSAERADYVISSFWPMLEAAILYTLPLAVISFFCGLLIAVIVAVIRTLPSPNLPLKLLQA 60 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + Y+ I RGTP+LVQ+F+IFYGLP +GI + F II+ ++N AY +E +R+SII+ Sbjct: 61 LCRVYISIIRGTPMLVQIFIIFYGLPEVGITLEPFPTAIIAFSINIGAYAAETVRASIIA 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQW+ASYAIG+ +Q I+PQ + S LS+ FIS +K TS+AS + + E+F+ Sbjct: 121 IPKGQWEASYAIGMNYRQAFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFR 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYI---IQIKIESSVTQH 220 AQ I + Y+ ++IY E A +Y + FC++ +Q ++E +++H Sbjct: 181 VAQNITAANYEFILIYSEAALIYWV---FCFVLSFLQDRLEIRLSRH 224 >gi|229003760|ref|ZP_04161571.1| Amino acid ABC transporter [Bacillus mycoides Rock1-4] gi|228757493|gb|EEM06727.1| Amino acid ABC transporter [Bacillus mycoides Rock1-4] Length = 209 Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 96/206 (46%), Positives = 133/206 (64%), Gaps = 1/206 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L A+ T+P+ I+FVI +I+ F A+ RI S ++ I YV I RGTPLLVQLF Sbjct: 3 MLEGALFTTIPLTIITFVIGIILAIFTALARIS-SSRLLQWIARIYVSIIRGTPLLVQLF 61 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +IFYGLP + I D + A II +LN AY SEIIR+SI+SIPKGQW+A+Y IG+T Q Sbjct: 62 IIFYGLPTLNIEIDPYPAAIIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIGMTYPQA 121 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 ++ IILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Y+ LI+Y E Sbjct: 122 LKRIILPQATRVSIPPLSNTFISLVKDTSLASLILVTELFRKAQEIAAMNYEFLIVYFEA 181 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHT 221 +Y + I+Q +E ++T Sbjct: 182 GLIYWAICFLLSIVQQILEKRSERYT 207 >gi|167720786|ref|ZP_02404022.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei DM98] Length = 208 Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 86/209 (41%), Positives = 138/209 (66%), Gaps = 2/209 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 + F+L++ + P L A +T+ A S V+ LI+G +A++RI S+ ++S I YV Sbjct: 2 QAFDLVVHTLPVLAKGA-ALTMKFAVASMVLGLIVGLLVALVRIG-SNRLLSAIAQGYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQ+FV++YGLP IGI D A I +LTLN AY+SE +R +I+ I +GQW Sbjct: 60 LMRGTPLLVQMFVVYYGLPDIGISLDPTAAGIFTLTLNAGAYLSESMRGAILGIGRGQWA 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AS+++GLT QT+RH+I PQ + + L + IS++K TS+ S IT+ E+ ++ Q +++ Sbjct: 120 ASHSLGLTHVQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIA 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIK 212 +T+QPL +Y A +Y +L++ +Q + Sbjct: 180 STFQPLPLYLAAAAIYWVLSTLLARLQGR 208 >gi|295103462|emb|CBL01006.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Faecalibacterium prausnitzii SL3/3] Length = 227 Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 81/217 (37%), Positives = 142/217 (65%), Gaps = 1/217 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++++++ P++L A + +T+P+ +SF ++II +A+++ + + ++ I FY+W+ R Sbjct: 12 SVLVEALPRILTAGLTMTIPLTLLSFFFAMIIAVAVALVQ-YANVPVLRQIARFYIWVIR 70 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQLF+IFYGLP +GI+ ++F A +I+ N AY +E +R ++ S+P+GQ +A Y Sbjct: 71 GTPLLVQLFIIFYGLPSVGIMLNAFPAAVIAFAFNEGAYCAETMRGALESVPQGQLEAGY 130 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +G++ Q +R I+LPQ + T+ LS+ I ++K TS+AS IT+ E+F QR+ + TY Sbjct: 131 CVGMSWWQIMRRIVLPQALRTAVPALSNSLIGMIKDTSLASNITVAELFMAGQRVAARTY 190 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 L IYCE+A VYL+ + +Q +E + + Sbjct: 191 IFLPIYCEVAVVYLLFCTVITKLQALLERQLNARGFQ 227 >gi|16273641|ref|NP_439236.1| ABC-type amino acid transport system permease component [Haemophilus influenzae Rd KW20] gi|260580164|ref|ZP_05847994.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus influenzae RdAW] gi|1074143|pir||H64181 ABC-type transport system probable membrane spanning protein - Haemophilus influenzae (strain Rd KW20) gi|260093448|gb|EEW77381.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus influenzae RdAW] Length = 238 Score = 177 bits (449), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 96/227 (42%), Positives = 143/227 (62%), Gaps = 10/227 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----ISL 56 M E +I SF +L AAI+ TLP+A ISF L+I +AVIR S + + Sbjct: 14 MSAERAEYVISSFWPMLEAAILYTLPLAVISFFCGLLIAVIVAVIRTLPSPNLPLKLLQA 73 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + Y+ I RGTP+LVQ+F+IFYGLP +GI + F II+ ++N AY +E +R+SII+ Sbjct: 74 LCRVYISIIRGTPMLVQIFIIFYGLPEVGITLEPFPTAIIAFSINIGAYAAETVRASIIA 133 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQW+ASYAIG+ +Q I+PQ + S LS+ FIS +K TS+AS + + E+F+ Sbjct: 134 IPKGQWEASYAIGMNYRQAFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFR 193 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYI---IQIKIESSVTQH 220 AQ I + Y+ ++IY E A +Y I FC++ +Q ++E +++H Sbjct: 194 VAQNITAANYEFILIYSEAALIYWI---FCFVLSFLQDRLEIRLSRH 237 >gi|26986969|ref|NP_742394.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida KT2440] gi|148545497|ref|YP_001265599.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida F1] gi|24981583|gb|AAN65858.1|AE016214_3 cysteine ABC transporter, permease protein, putative [Pseudomonas putida KT2440] gi|148509555|gb|ABQ76415.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida F1] gi|313496589|gb|ADR57955.1| Polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida BIRD-1] Length = 222 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 96/223 (43%), Positives = 144/223 (64%), Gaps = 8/223 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAA-IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--I 57 M E L++DS P LL A V L + + F L++GF +A++R+ I+ L + Sbjct: 1 MIAESLQLVVDSAPFLLKGAGYTVLLSVGGMFF--GLVLGFALALMRL---SKILPLNWL 55 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 YV FRGTPLLVQLFVI++G+P IGI D A +I L+LN +AYI EI+R++I SI Sbjct: 56 ARVYVSFFRGTPLLVQLFVIYFGMPQIGIELDPIPASLIGLSLNMAAYICEILRAAISSI 115 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 +GQW+A+ +IG+TR Q +R ILPQ + T+ PL + FIS++K T++A+TI +PE+F+ Sbjct: 116 DRGQWEAAASIGMTRVQAMRRAILPQALRTALPPLGNSFISLVKDTALAATIQVPELFRQ 175 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 AQ I + T++ +Y +A +Y +L S Q ++E+ V QH Sbjct: 176 AQLITARTFEVFTMYVAVAVIYWVLCSILAHFQNRMEARVNQH 218 >gi|145632443|ref|ZP_01788178.1| ABC-type amino acid transport system permease component [Haemophilus influenzae 3655] gi|145634237|ref|ZP_01789948.1| ABC-type amino acid transport system permease component [Haemophilus influenzae PittAA] gi|229846111|ref|ZP_04466223.1| ABC-type amino acid transport system permease component [Haemophilus influenzae 7P49H1] gi|144987350|gb|EDJ93880.1| ABC-type amino acid transport system permease component [Haemophilus influenzae 3655] gi|145268681|gb|EDK08674.1| ABC-type amino acid transport system permease component [Haemophilus influenzae PittAA] gi|229811115|gb|EEP46832.1| ABC-type amino acid transport system permease component [Haemophilus influenzae 7P49H1] Length = 238 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 96/227 (42%), Positives = 143/227 (62%), Gaps = 10/227 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----ISL 56 M E + +I SF +L AAI+ TLP+A ISF L+I +AVIR S + + Sbjct: 14 MSAERADYVISSFWPMLEAAILYTLPLAVISFFCGLLIAVIVAVIRTLPSPNLPLKLLQA 73 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + Y+ I RGTP+LVQ+F+IFYGLP +GI + F II+ ++N AY +E +R+SII+ Sbjct: 74 LCRVYISIIRGTPMLVQIFIIFYGLPEVGITLEPFPTAIIAFSINIGAYAAETVRASIIA 133 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQW+ASYAIG+ +Q I+PQ + S LS+ FIS +K TS+AS + + E+F+ Sbjct: 134 IPKGQWEASYAIGMNYRQAFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFR 193 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYI---IQIKIESSVTQH 220 AQ I + Y+ ++IY E A +Y I FC++ +Q ++E ++H Sbjct: 194 VAQNITAANYEFILIYSEAALIYWI---FCFVLSFLQDRLEIRFSRH 237 >gi|229843882|ref|ZP_04464023.1| ABC-type amino acid transport system permease component [Haemophilus influenzae 6P18H1] gi|229812876|gb|EEP48564.1| ABC-type amino acid transport system permease component [Haemophilus influenzae 6P18H1] Length = 238 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 96/227 (42%), Positives = 143/227 (62%), Gaps = 10/227 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----ISL 56 M E + +I SF +L AAI+ TLP+A ISF L+I +AVIR S + + Sbjct: 14 MSTERADYVISSFWPMLEAAILYTLPLAVISFFCGLLIAVIVAVIRTLPSPNLPLKLLQA 73 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + Y+ I RGTP+LVQ+F+IFYGLP +GI + F II+ ++N AY +E +R+SII+ Sbjct: 74 LCRVYISIIRGTPMLVQIFIIFYGLPEVGITLEPFPTAIIAFSINIGAYAAETVRASIIA 133 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQW+ASYAIG+ +Q I+PQ + S LS+ FIS +K TS+AS + + E+F+ Sbjct: 134 IPKGQWEASYAIGMNYRQAFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFR 193 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYI---IQIKIESSVTQH 220 AQ I + Y+ ++IY E A +Y I FC++ +Q ++E ++H Sbjct: 194 VAQNITAANYEFILIYSEAALIYWI---FCFVLSFLQDRLEIRFSRH 237 >gi|160943011|ref|ZP_02090249.1| hypothetical protein FAEPRAM212_00488 [Faecalibacterium prausnitzii M21/2] gi|158445705|gb|EDP22708.1| hypothetical protein FAEPRAM212_00488 [Faecalibacterium prausnitzii M21/2] Length = 227 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 81/217 (37%), Positives = 142/217 (65%), Gaps = 1/217 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++++++ P++L A + +T+P+ +SF ++II +A+++ + + ++ I FY+W+ R Sbjct: 12 SVLMEALPRILTAGLTMTIPLTLLSFFFAMIIAVAVALVQ-YANVPVLRQIARFYIWVIR 70 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQLF+IFYGLP +GI+ ++F A +I+ N AY +E +R ++ S+P+GQ +A Y Sbjct: 71 GTPLLVQLFIIFYGLPSVGIMLNAFPAAVIAFAFNEGAYCAETMRGALESVPQGQLEAGY 130 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +G++ Q +R I+LPQ + T+ LS+ I ++K TS+AS IT+ E+F QR+ + TY Sbjct: 131 CVGMSWWQIMRRIVLPQALRTAVPALSNSLIGMIKDTSLASNITVAELFMAGQRVAARTY 190 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 L IYCE+A VYL+ + +Q +E + + Sbjct: 191 IFLPIYCEVAVVYLLFCTVITKLQALLERQLNARGFQ 227 >gi|83720853|ref|YP_442092.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia thailandensis E264] gi|257138278|ref|ZP_05586540.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia thailandensis E264] gi|83654678|gb|ABC38741.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia thailandensis E264] Length = 219 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 87/212 (41%), Positives = 141/212 (66%), Gaps = 2/212 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 + F+L++ + P L A V+T+ A S V+ LI+G +A++RI ++ +S I YV Sbjct: 2 QAFDLVVHTLPILARGA-VLTMKFAVASMVLGLIVGLVVAIVRIG-NNRFLSAIAQGYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQ+FV++YGLP IGI D A I +LTLN AY+SE +R +I+ I +GQW Sbjct: 60 LMRGTPLLVQMFVVYYGLPDIGISLDPTSAGIFTLTLNAGAYLSESMRGAILGIGRGQWA 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AS+++GLT QT+R++I PQ + + L + IS++K TS+ S IT+ E+ ++ Q +++ Sbjct: 120 ASHSLGLTHAQTLRYVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIA 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +T+QPL +Y A +Y +L++ +Q +IE+ Sbjct: 180 STFQPLPLYLAAAAIYWVLSTLLARLQGRIET 211 >gi|229543204|ref|ZP_04432264.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus coagulans 36D1] gi|229327624|gb|EEN93299.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus coagulans 36D1] Length = 230 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 98/215 (45%), Positives = 139/215 (64%), Gaps = 1/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +L+ S +L A+ T+P+ I+F I L++ A+ RI I+ I YV Sbjct: 14 LHLVQSSLLSMLKGALHYTIPLTIITFCIGLVLALATALARIS-GIKILEWIARIYVSAI 72 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+IFYGLP + I SF A II +LN AY SEIIR++I+SIPKGQW+A+ Sbjct: 73 RGTPLLVQLFIIFYGLPSVHITIGSFPAAIIGFSLNVGAYASEIIRAAILSIPKGQWEAA 132 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y+IG+ Q +R I+LPQ + S PLS+ FIS++K TS+AS I + ++F+ AQ I STT Sbjct: 133 YSIGMNYSQALRRIVLPQAVRVSVPPLSNTFISLVKDTSLASLILVADLFRKAQEIASTT 192 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 YQ +++Y E AF+Y ++ IIQ K+E ++ Sbjct: 193 YQFMLLYVEAAFLYWVICLILSIIQQKLEGRFDKY 227 >gi|167619033|ref|ZP_02387664.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia thailandensis Bt4] Length = 219 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 87/212 (41%), Positives = 141/212 (66%), Gaps = 2/212 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 + F+L++ + P L A V+T+ A S V+ LI+G +A++RI ++ +S I YV Sbjct: 2 QAFDLVVHTLPILARGA-VLTMKFAVASMVLGLIVGLVVAIVRIG-NNRFLSAIAQGYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQ+FV++YGLP IGI D A I +LTLN AY+SE +R +I+ I +GQW Sbjct: 60 LMRGTPLLVQMFVVYYGLPDIGISLDPTSAGIFTLTLNAGAYLSESMRGAILGIGRGQWA 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AS+++GLT QT+R++I PQ + + L + IS++K TS+ S IT+ E+ ++ Q +++ Sbjct: 120 ASHSLGLTHAQTLRYVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIA 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +T+QPL +Y A +Y +L++ +Q +IE+ Sbjct: 180 STFQPLPLYLAAAAIYWVLSTLLVRLQGRIET 211 >gi|167580938|ref|ZP_02373812.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia thailandensis TXDOH] Length = 219 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 87/212 (41%), Positives = 141/212 (66%), Gaps = 2/212 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 + F+L++ + P L AI+ T+ A S V+ LI+G +A++RI ++ +S I YV Sbjct: 2 QAFDLVVHTLPILARGAIL-TMKFAVASMVLGLIVGLVVAIVRIG-NNRFLSAIAQGYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQ+FV++YGLP IGI D A I +LTLN AY+SE +R +I+ I +GQW Sbjct: 60 LMRGTPLLVQMFVVYYGLPDIGISLDPTSAGIFTLTLNAGAYLSESMRGAILGIGRGQWA 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AS+++GLT QT+R++I PQ + + L + IS++K TS+ S IT+ E+ ++ Q +++ Sbjct: 120 ASHSLGLTHAQTLRYVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIA 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +T+QPL +Y A +Y +L++ +Q +IE+ Sbjct: 180 STFQPLPLYLAAAAIYWVLSTLLARLQGRIET 211 >gi|196037333|ref|ZP_03104644.1| amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] gi|196031575|gb|EDX70171.1| amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] Length = 214 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 93/211 (44%), Positives = 135/211 (63%), Gaps = 1/211 (0%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 SF +L A+ T+P+ I+F+I +I+ A+ RI S I+ I YV I RGTPL Sbjct: 3 SSFMPMLKEAVFTTIPLTLITFIIGIILATLTALARISGSR-ILQWIARIYVSIIRGTPL 61 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LVQLF+IFYGLP + + + + A +I +LN AY SEIIR+SI+SIPKGQW+A+Y IG+ Sbjct: 62 LVQLFIIFYGLPTLNVEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIGM 121 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T Q ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Y+ LI Sbjct: 122 TYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEFLI 181 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 +Y E +Y ++ I+Q +E ++T Sbjct: 182 VYFEAGLIYWVICFLLSIVQQMLEKRSERYT 212 >gi|332973052|gb|EGK10989.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Kingella kingae ATCC 23330] Length = 238 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 91/218 (41%), Positives = 139/218 (63%), Gaps = 4/218 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHFYV 62 L++D+F ++ A I+++ P+A SF+ +II +A++R+ +D I+ I+ YV Sbjct: 18 QLMMDAFWPMVKAGIIISFPLAVASFIFGIIIAVGVALVRVSPADNWLHKILLGIVRTYV 77 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I RGTPLLVQ+ ++FYGLP + I D A II +LN AY SE IR+SI+S+PKGQW Sbjct: 78 SIIRGTPLLVQISIVFYGLPALNIFIDPIPAAIIGFSLNVGAYASETIRASILSVPKGQW 137 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A ++IG+T QT R I+ PQ + PLS++FI + K+TS+AS +T+ E+F+ AQ+ Sbjct: 138 EAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNDFIGLFKNTSLASVVTVTELFRVAQQYA 197 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +++Y L IY E A VY + IQ +IE +H Sbjct: 198 NSSYDFLPIYIEAACVYWCFCMILFAIQSRIEKCFNRH 235 >gi|227529474|ref|ZP_03959523.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus vaginalis ATCC 49540] gi|227350559|gb|EEJ40850.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus vaginalis ATCC 49540] Length = 231 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 94/221 (42%), Positives = 141/221 (63%), Gaps = 11/221 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYV 62 + +I S PQLL A T+P+A ISF LII A+IR+ I+ + FYV Sbjct: 2 WEIIRTSLPQLLAAGFKYTIPLALISFFFGLIIALVTALIRLSHQRGPFMILKWFVQFYV 61 Query: 63 WIFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 W+FR TPLLVQLF++F+GLP++ GI + F A II+ +LN +Y SE IR++I Sbjct: 62 WLFRSTPLLVQLFIVFFGLPYLRIRGILPHGIKLEPFTAGIITFSLNTGSYASETIRAAI 121 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+ GQW+A AIG+TR Q + II+PQ + + PLS+ FIS++K TS+A++ITI E+ Sbjct: 122 SSVDHGQWEAGAAIGMTRLQILWRIIIPQALRVALPPLSNSFISLVKDTSLAASITIMEM 181 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 F+ +Q+I + YQPL++Y +A +Y + T+ ++Q +E Sbjct: 182 FEVSQQIAAANYQPLLMYTLVALIYAVFTTVLSVLQHYLEK 222 >gi|319776668|ref|YP_004139156.1| amino-acid ABC transporter permease [Haemophilus influenzae F3047] gi|329124186|ref|ZP_08252733.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus aegyptius ATCC 11116] gi|317451259|emb|CBY87493.1| probable amino-acid ABC transporter permease protein [Haemophilus influenzae F3047] gi|327467611|gb|EGF13109.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus aegyptius ATCC 11116] Length = 238 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 96/227 (42%), Positives = 144/227 (63%), Gaps = 10/227 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF----FSDTIISL 56 M E + +I SF +L AAI+ TLP+A ISF L+I +AVI F ++ Sbjct: 14 MSAERADYVISSFWPMLEAAILYTLPLAVISFFCGLLIAVIVAVICTLPHPNFMTKLLQS 73 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I Y+ I RGTP+LVQ+F+IFYGLP +GI + F II+ ++N AY +E +R+SII+ Sbjct: 74 IGRAYISIIRGTPMLVQIFIIFYGLPEVGIKLEPFPTAIIAFSVNIGAYAAETVRASIIA 133 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQW+ASYAIG+ +Q I+PQ + S LS+ FIS +K TS+AS + I E+F+ Sbjct: 134 IPKGQWEASYAIGMNYQQAFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVWIAELFR 193 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYII---QIKIESSVTQH 220 AQ I + Y+ ++IY E A +Y + FC+++ Q+++E +++H Sbjct: 194 VAQNITAENYEFILIYSEAALIYWV---FCFVLSIGQMRLEKRLSRH 237 >gi|205372795|ref|ZP_03225605.1| amino acid ABC transporter (permease) [Bacillus coahuilensis m4-4] Length = 230 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 91/214 (42%), Positives = 141/214 (65%), Gaps = 1/214 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +++ S +L A+ ++P+ SFVI + + + + + +I I YV R Sbjct: 15 DILQSSLMPMLKGALYYSIPLTLSSFVIGMAL-ALLTALARLSNVSIFRGIARVYVSAIR 73 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQLF+IFYGLP++G+ DSF + +I+ +LN AY SEI+R+SI SIPKGQW+A Y Sbjct: 74 GTPLLVQLFIIFYGLPNLGLNIDSFPSAVIAFSLNVGAYASEIVRASIESIPKGQWEAGY 133 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+T +QT++ I+LPQ S PLS+ FIS++K TS+AS + + E+F+ AQ I +T Y Sbjct: 134 SVGMTYRQTLKRIVLPQAARVSIPPLSNTFISLVKDTSLASLVLVAEMFRKAQEIAATNY 193 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Q L++Y E AF+Y ++ I Q +IE +++H Sbjct: 194 QFLLVYMEAAFLYWVICFILSIAQDRIEIRLSRH 227 >gi|228932271|ref|ZP_04095155.1| Amino acid ABC transporter [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827396|gb|EEM73146.1| Amino acid ABC transporter [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 209 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 93/206 (45%), Positives = 133/206 (64%), Gaps = 1/206 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L A+ T+P+ I+F+I LI+ A+ RI S I+ I YV I RGTPLLVQLF Sbjct: 3 MLKEAVFTTIPLTLITFIIGLILATLTALARISGSR-ILQWIARIYVSIIRGTPLLVQLF 61 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +IFYGLP + + + + A +I +LN AY SEIIR+SI+SIPKGQW+A+Y IG+T Q Sbjct: 62 IIFYGLPTLNVEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIGMTYPQA 121 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Y+ LIIY E Sbjct: 122 LKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEFLIIYFEA 181 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHT 221 +Y ++ I+Q +E ++T Sbjct: 182 GLIYWVICFLLSIVQQMLEKRSERYT 207 >gi|293395619|ref|ZP_06639902.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] gi|291421938|gb|EFE95184.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] Length = 220 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 90/219 (41%), Positives = 141/219 (64%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFY 61 E L +DS P LL AI+ TL ++ + L++GF +A++R+ F+ +S + Y Sbjct: 3 ESIQLALDSAPFLLKGAIL-TLQLSLGGMALGLVLGFVLALMRLSRFWP---LSWLSRIY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V +FRGTPL+ QLF+I+YGLP GI D F A +I L+LN +AY SE +R++I SI KGQ Sbjct: 59 VSLFRGTPLIAQLFMIYYGLPQFGIELDPFPAALIGLSLNTAAYTSETLRAAIASIDKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R +ILPQ T+ PL + FI ++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQTLRRVILPQAARTALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y ++ + +Q ++E+ V + Sbjct: 179 TSRTLEVFTMYLAASLIYWVMATLLSALQNRLEAHVNRQ 217 >gi|228957269|ref|ZP_04119035.1| Amino acid ABC transporter [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802460|gb|EEM49311.1| Amino acid ABC transporter [Bacillus thuringiensis serovar pakistani str. T13001] Length = 207 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 92/206 (44%), Positives = 133/206 (64%), Gaps = 1/206 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L A+ T+P+ I+F+I LI+ A+ RI S I+ I YV I RGTPLLVQLF Sbjct: 1 MLKEAVFTTIPLTLITFIIGLILATLTALARISGSR-ILQWIARIYVSIIRGTPLLVQLF 59 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +IFYGLP + I + + A ++ +LN AY SEIIR+SI+SIPKGQW+A+Y IG+T Q Sbjct: 60 IIFYGLPTLNIEVEPYAAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIGMTYPQA 119 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Y+ LI+Y E Sbjct: 120 LKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEFLIVYFEA 179 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHT 221 +Y ++ I+Q +E ++T Sbjct: 180 GLIYWVICFLLSIVQQMLEKRSERYT 205 >gi|325272374|ref|ZP_08138772.1| amino acid ABC transporter permease [Pseudomonas sp. TJI-51] gi|324102499|gb|EGB99947.1| amino acid ABC transporter permease [Pseudomonas sp. TJI-51] Length = 222 Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 95/222 (42%), Positives = 144/222 (64%), Gaps = 6/222 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAA-IVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIM 58 M E L+ DS P LL A V L + + F L++GF +A++R+ S + ++ + Sbjct: 1 MIAESLQLVADSAPFLLKGAGYTVLLSVGGMFF--GLVLGFALALMRL--SKVLPLNWLA 56 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV FRGTPLLVQLFVI++G+P IGI D A +I L+LN +AYI EI+R++I SI Sbjct: 57 RIYVSFFRGTPLLVQLFVIYFGMPQIGIELDPIPASLIGLSLNMAAYICEILRAAISSID 116 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW+A+ +IG+TR Q +R ILPQ + T+ PL + FIS++K T++A+TI +PE+F+ A Sbjct: 117 RGQWEAAASIGMTRVQAMRRAILPQALRTALPPLGNSFISLVKDTALAATIQVPELFRQA 176 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Q I + T++ +Y +A +Y +L S Q ++E+ V QH Sbjct: 177 QLITARTFEVFTMYVAVAVIYWVLCSILAHFQNRMEARVNQH 218 >gi|229126284|ref|ZP_04255302.1| Amino acid ABC transporter [Bacillus cereus BDRD-Cer4] gi|229137673|ref|ZP_04266278.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST26] gi|229195190|ref|ZP_04321965.1| Amino acid ABC transporter [Bacillus cereus m1293] gi|228588419|gb|EEK46462.1| Amino acid ABC transporter [Bacillus cereus m1293] gi|228645788|gb|EEL02017.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST26] gi|228657276|gb|EEL13096.1| Amino acid ABC transporter [Bacillus cereus BDRD-Cer4] Length = 207 Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 92/206 (44%), Positives = 133/206 (64%), Gaps = 1/206 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L A+ T+P+ I+F+I LI+ A+ RI S I+ I YV I RGTPLLVQLF Sbjct: 1 MLKEAVFTTIPLTLITFIIGLILATLTALARISGSR-ILQWIARIYVSIIRGTPLLVQLF 59 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +IFYGLP + I + + A ++ +LN AY SEIIR+SI+SIPKGQW+A+Y IG+T Q Sbjct: 60 IIFYGLPTLNIEVEPYTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIGMTYPQA 119 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Y+ LI+Y E Sbjct: 120 LKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEFLIVYFEA 179 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHT 221 +Y ++ I+Q +E ++T Sbjct: 180 GLIYWVICFLLSIVQQMLEKRSERYT 205 >gi|206975732|ref|ZP_03236644.1| amino acid ABC transporter, permease protein [Bacillus cereus H3081.97] gi|217958459|ref|YP_002337007.1| amino acid ABC transporter, permease protein [Bacillus cereus AH187] gi|218232526|ref|YP_002365642.1| amino acid ABC transporter, permease protein [Bacillus cereus B4264] gi|228938118|ref|ZP_04100738.1| Amino acid ABC transporter [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970993|ref|ZP_04131630.1| Amino acid ABC transporter [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977596|ref|ZP_04137988.1| Amino acid ABC transporter [Bacillus thuringiensis Bt407] gi|228984046|ref|ZP_04144235.1| Amino acid ABC transporter [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229042723|ref|ZP_04190463.1| Amino acid ABC transporter [Bacillus cereus AH676] gi|229108461|ref|ZP_04238078.1| Amino acid ABC transporter [Bacillus cereus Rock1-15] gi|229143577|ref|ZP_04272002.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST24] gi|229149192|ref|ZP_04277433.1| Amino acid ABC transporter [Bacillus cereus m1550] gi|206746194|gb|EDZ57589.1| amino acid ABC transporter, permease protein [Bacillus cereus H3081.97] gi|217067339|gb|ACJ81589.1| amino acid ABC transporter, permease protein [Bacillus cereus AH187] gi|218160483|gb|ACK60475.1| amino acid ABC transporter, permease protein [Bacillus cereus B4264] gi|228634391|gb|EEK90979.1| Amino acid ABC transporter [Bacillus cereus m1550] gi|228639933|gb|EEK96338.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST24] gi|228675088|gb|EEL30315.1| Amino acid ABC transporter [Bacillus cereus Rock1-15] gi|228726663|gb|EEL77880.1| Amino acid ABC transporter [Bacillus cereus AH676] gi|228775726|gb|EEM24103.1| Amino acid ABC transporter [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228782240|gb|EEM30426.1| Amino acid ABC transporter [Bacillus thuringiensis Bt407] gi|228788802|gb|EEM36744.1| Amino acid ABC transporter [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821603|gb|EEM67608.1| Amino acid ABC transporter [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938619|gb|AEA14515.1| cystine transport system permease [Bacillus thuringiensis serovar chinensis CT-43] Length = 209 Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 92/206 (44%), Positives = 133/206 (64%), Gaps = 1/206 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L A+ T+P+ I+F+I LI+ A+ RI S I+ I YV I RGTPLLVQLF Sbjct: 3 MLKEAVFTTIPLTLITFIIGLILATLTALARISGSR-ILQWIARIYVSIIRGTPLLVQLF 61 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +IFYGLP + I + + A ++ +LN AY SEIIR+SI+SIPKGQW+A+Y IG+T Q Sbjct: 62 IIFYGLPTLNIEVEPYTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIGMTYPQA 121 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Y+ LI+Y E Sbjct: 122 LKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEFLIVYFEA 181 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHT 221 +Y ++ I+Q +E ++T Sbjct: 182 GLIYWVICFLLSIVQQMLEKRSERYT 207 >gi|165871931|ref|ZP_02216573.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|190566522|ref|ZP_03019439.1| amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|196035250|ref|ZP_03102656.1| amino acid ABC transporter, permease protein [Bacillus cereus W] gi|218902066|ref|YP_002449900.1| amino acid ABC transporter, permease protein [Bacillus cereus AH820] gi|227816276|ref|YP_002816285.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|228926026|ref|ZP_04089107.1| Amino acid ABC transporter [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228944595|ref|ZP_04106965.1| Amino acid ABC transporter [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229089915|ref|ZP_04221170.1| Amino acid ABC transporter [Bacillus cereus Rock3-42] gi|229120487|ref|ZP_04249734.1| Amino acid ABC transporter [Bacillus cereus 95/8201] gi|254682947|ref|ZP_05146808.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CNEVA-9066] gi|254725735|ref|ZP_05187517.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A1055] gi|254734361|ref|ZP_05192074.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Western North America USA6153] gi|254739991|ref|ZP_05197683.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Kruger B] gi|254753330|ref|ZP_05205366.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Vollum] gi|254758428|ref|ZP_05210455.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Australia 94] gi|164712362|gb|EDR17897.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|190562074|gb|EDV16042.1| amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|195992314|gb|EDX56276.1| amino acid ABC transporter, permease protein [Bacillus cereus W] gi|218537512|gb|ACK89910.1| amino acid ABC transporter, permease protein [Bacillus cereus AH820] gi|227007055|gb|ACP16798.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|228663072|gb|EEL18665.1| Amino acid ABC transporter [Bacillus cereus 95/8201] gi|228693540|gb|EEL47246.1| Amino acid ABC transporter [Bacillus cereus Rock3-42] gi|228815055|gb|EEM61306.1| Amino acid ABC transporter [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228833738|gb|EEM79294.1| Amino acid ABC transporter [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 209 Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 92/206 (44%), Positives = 133/206 (64%), Gaps = 1/206 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L A+ T+P+ I+F+I LI+ A+ RI S I+ I YV I RGTPLLVQLF Sbjct: 3 MLKEAVFTTIPLTLITFIIGLILATLTALARISGSR-ILQWIARIYVSIIRGTPLLVQLF 61 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +IFYGLP + + + + A +I +LN AY SEIIR+SI+SIPKGQW+A+Y IG+T Q Sbjct: 62 IIFYGLPTLNVEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIGMTYPQA 121 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Y+ LI+Y E Sbjct: 122 LKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEFLIVYFEA 181 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHT 221 +Y ++ I+Q +E ++T Sbjct: 182 GLIYWVICFLLSIVQQMLEKRSERYT 207 >gi|167837542|ref|ZP_02464425.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia thailandensis MSMB43] Length = 219 Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 86/212 (40%), Positives = 138/212 (65%), Gaps = 2/212 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 + F+L++ + P L A V+T+ A + V+ LI+G +A++RI + + I YV Sbjct: 2 QAFDLVVHTLPVLAKGA-VLTMKFAVAAMVLGLIVGLVVAIVRIG-DNRFLCAIAQGYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQ+FV++YGLP IGI D A I +LTLN AY+SE +R +I+ I +GQW Sbjct: 60 LMRGTPLLVQMFVVYYGLPDIGISLDPTAAGIFTLTLNAGAYLSESMRGAILGIGRGQWA 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AS+++GLT QT+RH+I PQ + + L + IS++K TS+ S IT+ E+ ++ Q +++ Sbjct: 120 ASHSLGLTHVQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIA 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +T+QPL +Y A +Y L++ +Q +IE+ Sbjct: 180 STFQPLPLYLAAAAIYWALSTLLARLQGRIET 211 >gi|228913540|ref|ZP_04077169.1| Amino acid ABC transporter [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228846127|gb|EEM91149.1| Amino acid ABC transporter [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|324324900|gb|ADY20160.1| amino acid ABC transporter permease [Bacillus thuringiensis serovar finitimus YBT-020] Length = 209 Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 91/206 (44%), Positives = 133/206 (64%), Gaps = 1/206 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L A+ T+P+ I+F+I LI+ A+ RI S I+ I YV I RGTPLLVQLF Sbjct: 3 MLKEAVFTTIPLTLITFIIGLILATLTALARISGSR-ILQWIARIYVSIIRGTPLLVQLF 61 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +IFYGLP + + + + A ++ +LN AY SEIIR+SI+SIPKGQW+A+Y IG+T Q Sbjct: 62 IIFYGLPTLNVEVEPYTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIGMTYPQA 121 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Y+ LI+Y E Sbjct: 122 LKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEFLIVYFEA 181 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHT 221 +Y ++ I+Q +E ++T Sbjct: 182 GLIYWVICFLLSIVQQMLEKRSERYT 207 >gi|251793713|ref|YP_003008443.1| glutamine-binding periplasmic protein/glutamine transport system permease [Aggregatibacter aphrophilus NJ8700] gi|247535110|gb|ACS98356.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Aggregatibacter aphrophilus NJ8700] Length = 225 Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 91/224 (40%), Positives = 138/224 (61%), Gaps = 4/224 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----ISL 56 M E + +I SF ++ AAI T+P+A ISF + I +A+IRI + + + Sbjct: 1 MNAERADEVISSFWPMMEAAIDKTIPLAVISFFAGVAIALIVALIRIVEKPNLGIRLLQI 60 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV RGTP+LVQ+F+IFYGLP +GI D F II+ ++N AY SE IR++I+S Sbjct: 61 LCRIYVSTIRGTPMLVQIFIIFYGLPEVGIKLDPFPTAIIAFSINIGAYASETIRAAILS 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQW+ASY+IG+ QT I+PQ + S PL++ FIS +K TS+AS + + E+F+ Sbjct: 121 IPKGQWEASYSIGMNYYQTFTRTIMPQALRVSVPPLANTFISNVKDTSLASLVLVTEMFR 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 AQ I + Y+ ++IY E A +Y + Q ++E +++H Sbjct: 181 VAQNITAENYEFIMIYSEAALIYWCICLILSFAQDRLEKRLSRH 224 >gi|229074557|ref|ZP_04207586.1| Amino acid ABC transporter [Bacillus cereus Rock4-18] gi|229095491|ref|ZP_04226482.1| Amino acid ABC transporter [Bacillus cereus Rock3-29] gi|229101615|ref|ZP_04232338.1| Amino acid ABC transporter [Bacillus cereus Rock3-28] gi|229114443|ref|ZP_04243861.1| Amino acid ABC transporter [Bacillus cereus Rock1-3] gi|229159927|ref|ZP_04287934.1| Amino acid ABC transporter [Bacillus cereus R309803] gi|228623666|gb|EEK80485.1| Amino acid ABC transporter [Bacillus cereus R309803] gi|228669122|gb|EEL24546.1| Amino acid ABC transporter [Bacillus cereus Rock1-3] gi|228681857|gb|EEL36011.1| Amino acid ABC transporter [Bacillus cereus Rock3-28] gi|228688037|gb|EEL41924.1| Amino acid ABC transporter [Bacillus cereus Rock3-29] gi|228708677|gb|EEL60821.1| Amino acid ABC transporter [Bacillus cereus Rock4-18] Length = 207 Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 92/206 (44%), Positives = 133/206 (64%), Gaps = 1/206 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L A+ T+P+ I+F+I +I+ A+ RI S I+ I YV I RGTPLLVQLF Sbjct: 1 MLKEAVFTTIPLTLITFIIGIILATLTALARISGSR-ILQWIARIYVSIIRGTPLLVQLF 59 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +IFYGLP + I + + A +I +LN AY SEIIR+SI+SIPKGQW+A+Y IG+T Q Sbjct: 60 IIFYGLPTLNIEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIGMTYPQA 119 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Y+ LI+Y E Sbjct: 120 LKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEFLIVYFEA 179 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHT 221 +Y ++ I+Q +E ++T Sbjct: 180 GLIYWVICFLLSIVQQMLEKRSERYT 205 >gi|300717206|ref|YP_003742009.1| L-cystine ABC transporter permease [Erwinia billingiae Eb661] gi|299063042|emb|CAX60162.1| L-cystine ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 222 Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 93/219 (42%), Positives = 140/219 (63%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFY 61 E L++DS P LL A V TL ++ L++GF +A++R+ F+ IS + Y Sbjct: 3 ESIQLVLDSAPFLLKGA-VFTLQLSIGGMFFGLLLGFILAMMRLSHFWP---ISWLSRCY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY SE +R +I SI +GQ Sbjct: 59 VSIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYASESLRGAIASIERGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+TR QT+R +ILPQ T+ PL + FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAASSIGMTRWQTMRRVILPQAARTALPPLGNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y ++ + I+Q K+E V + Sbjct: 179 TSRTLEVFTMYLAASLIYWVMATVLSILQSKLEDRVNRQ 217 >gi|295102636|emb|CBL00181.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Faecalibacterium prausnitzii L2-6] Length = 227 Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 79/213 (37%), Positives = 138/213 (64%), Gaps = 1/213 (0%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 ++ P++L A + +T+P+ +SF +++++ +A+++ + ++S + FY+W+ RGTPL Sbjct: 16 EALPRILSAGLTMTIPLTLVSFTLAMVLAVAVALVQ-YAKVPVLSQLARFYIWVIRGTPL 74 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LVQLF+IFYGLP GI+ ++F A +I+ N AY +E +R ++ S+P+GQ +A +G+ Sbjct: 75 LVQLFIIFYGLPSAGIMLNAFPAAVIAFAFNEGAYCAETMRGALESVPQGQLEAGCCVGM 134 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + Q +R I+LPQ + T+ LS+ I ++K TS+AS IT+ E+F QR+ + TY L Sbjct: 135 SWWQIMRRIVLPQALRTAVPALSNSLIGMVKDTSLASNITVAELFMAGQRVAARTYIFLP 194 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 IYCE+A VYL+ + +Q +E + H + Sbjct: 195 IYCEVAVVYLLFCTVITKLQGLLERQLNAHGFQ 227 >gi|52425331|ref|YP_088468.1| ArtM protein [Mannheimia succiniciproducens MBEL55E] gi|52307383|gb|AAU37883.1| ArtM protein [Mannheimia succiniciproducens MBEL55E] Length = 238 Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 88/218 (40%), Positives = 140/218 (64%), Gaps = 4/218 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS----LIMHFYV 62 +L+I +F ++ AA++V++P+A SF+I +II +A++R+ + +I +I+ Y+ Sbjct: 18 DLVISAFWPMVEAAVLVSIPLAVSSFIIGMIIAVAVALVRVTPVNGVIHRLFLVIVKVYI 77 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I RGTP+LVQ+ V+FYGLP +GI D A II +LN AY SE +R++I S+PKGQW Sbjct: 78 SIIRGTPMLVQISVVFYGLPALGIFIDPIPAAIIGFSLNIGAYASETVRAAISSVPKGQW 137 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A Y IG++ QT R II PQ + PLS+ FI + K TS+AS +T+ E+F+ AQ++ Sbjct: 138 EAGYTIGMSYMQTFRRIIAPQAFRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMA 197 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + +Y L IY E +Y ++IQ K+E + ++ Sbjct: 198 NMSYDFLPIYIEAGLIYWCFCWVLFVIQAKVEKRMERY 235 >gi|33152996|ref|NP_874349.1| amino-acid ABC transporter permease protein [Haemophilus ducreyi 35000HP] gi|33149221|gb|AAP96738.1| amino-acid ABC transporter permease protein [Haemophilus ducreyi 35000HP] Length = 238 Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 93/219 (42%), Positives = 142/219 (64%), Gaps = 18/219 (8%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH------- 59 L++D+F +L A ++V++P+A +SF+I +II +A++RI T +S +MH Sbjct: 18 KLVMDAFWPMLQAMVLVSIPLAIVSFIIGMIIAVLVALVRI----TSVSGMMHRILLVII 73 Query: 60 -FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y+ I RGTP+LVQ+ ++FYGLP +G D A II +LN AY SE +R++I ++P Sbjct: 74 QAYISIIRGTPMLVQISIVFYGLPALGFYVDPIPAAIIGFSLNIGAYASETVRAAISAVP 133 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQW+A Y+IG+T QT R II PQ I + PLS+ FI + K TS+AS +T+ E+F+ A Sbjct: 134 KGQWEAGYSIGMTYLQTFRRIIAPQAIRVAIPPLSNTFIGLFKDTSLASVVTVTEMFRVA 193 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYI---IQIKIE 214 Q++ + +Y L +Y E AF+Y FC+I IQ ++E Sbjct: 194 QQMANMSYDFLPVYIEAAFIYW---CFCWILFGIQARLE 229 >gi|237798050|ref|ZP_04586511.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020901|gb|EGI00958.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 222 Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 93/221 (42%), Positives = 140/221 (63%), Gaps = 4/221 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAI-VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M E L +DS P LL A V L + + F L++GF +A++R+ + + + Sbjct: 1 MIEESLQLALDSAPFLLKGAYYTVFLSLGGMFF--GLVLGFGLALMRLSRFKPV-NWLAR 57 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV FRGTPLLVQLF+I+YGLP +GI D A +I +LN +AY EI+RS+I SI + Sbjct: 58 IYVSFFRGTPLLVQLFLIYYGLPELGIELDPLTAALIGFSLNMAAYACEILRSAIGSIER 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A+ +IG+TR QT+R ILPQ T+ PL + FIS++K T++A+TI +PE+F+ AQ Sbjct: 118 GQWEAAASIGMTRWQTLRRAILPQAARTALPPLGNSFISLVKDTALAATIQVPELFRQAQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I + T++ +Y A +Y IL + +Q ++E+ V +H Sbjct: 178 LITARTFEIFTMYLAAALIYWILATALSYLQNRLEARVNRH 218 >gi|196046952|ref|ZP_03114172.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB108] gi|229154561|ref|ZP_04282678.1| Amino acid ABC transporter [Bacillus cereus ATCC 4342] gi|229183181|ref|ZP_04310411.1| Amino acid ABC transporter [Bacillus cereus BGSC 6E1] gi|196022181|gb|EDX60868.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB108] gi|228600320|gb|EEK57910.1| Amino acid ABC transporter [Bacillus cereus BGSC 6E1] gi|228628959|gb|EEK85669.1| Amino acid ABC transporter [Bacillus cereus ATCC 4342] Length = 209 Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 91/206 (44%), Positives = 133/206 (64%), Gaps = 1/206 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L A+ T+P+ I+F+I +I+ A+ RI S I+ I YV I RGTPLLVQLF Sbjct: 3 MLKEAVFTTIPLTLITFIIGIILATLTALARISGSR-ILQWIARIYVSIIRGTPLLVQLF 61 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +IFYGLP + + + + A +I +LN AY SEIIR+SI+SIPKGQW+A+Y IG+T Q Sbjct: 62 IIFYGLPTLNVEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIGMTYPQA 121 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Y+ LI+Y E Sbjct: 122 LKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEFLIVYFEA 181 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHT 221 +Y ++ I+Q +E ++T Sbjct: 182 GLIYWVICFLLSIVQQMLEKRSERYT 207 >gi|206968421|ref|ZP_03229377.1| amino acid ABC transporter, permease protein [Bacillus cereus AH1134] gi|218895897|ref|YP_002444308.1| amino acid ABC transporter, permease protein [Bacillus cereus G9842] gi|228899529|ref|ZP_04063785.1| Amino acid ABC transporter [Bacillus thuringiensis IBL 4222] gi|228906601|ref|ZP_04070477.1| Amino acid ABC transporter [Bacillus thuringiensis IBL 200] gi|228919695|ref|ZP_04083057.1| Amino acid ABC transporter [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228951348|ref|ZP_04113457.1| Amino acid ABC transporter [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229068525|ref|ZP_04201826.1| Amino acid ABC transporter [Bacillus cereus F65185] gi|229177391|ref|ZP_04304774.1| Amino acid ABC transporter [Bacillus cereus 172560W] gi|229189061|ref|ZP_04316089.1| Amino acid ABC transporter [Bacillus cereus ATCC 10876] gi|206737341|gb|EDZ54488.1| amino acid ABC transporter, permease protein [Bacillus cereus AH1134] gi|218542540|gb|ACK94934.1| amino acid ABC transporter, permease protein [Bacillus cereus G9842] gi|228594481|gb|EEK52272.1| Amino acid ABC transporter [Bacillus cereus ATCC 10876] gi|228606114|gb|EEK63552.1| Amino acid ABC transporter [Bacillus cereus 172560W] gi|228714667|gb|EEL66541.1| Amino acid ABC transporter [Bacillus cereus F65185] gi|228808285|gb|EEM54795.1| Amino acid ABC transporter [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228840049|gb|EEM85328.1| Amino acid ABC transporter [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228853150|gb|EEM97928.1| Amino acid ABC transporter [Bacillus thuringiensis IBL 200] gi|228860119|gb|EEN04523.1| Amino acid ABC transporter [Bacillus thuringiensis IBL 4222] Length = 209 Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 91/206 (44%), Positives = 133/206 (64%), Gaps = 1/206 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L A+ T+P+ I+F+I +I+ A+ RI S I+ I YV I RGTPLLVQLF Sbjct: 3 MLKEAVFTTIPLTLITFIIGIILATLTALARISGSR-ILQWIARIYVSIIRGTPLLVQLF 61 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +IFYGLP + I + + A ++ +LN AY SEIIR+SI+SIPKGQW+A+Y IG+T Q Sbjct: 62 IIFYGLPTLNIEVEPYTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIGMTYPQA 121 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Y+ LI+Y E Sbjct: 122 LKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEFLIVYFEA 181 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHT 221 +Y ++ I+Q +E ++T Sbjct: 182 GLIYWVICFLLSIVQQMLEKRSERYT 207 >gi|229078176|ref|ZP_04210751.1| Amino acid ABC transporter [Bacillus cereus Rock4-2] gi|228705122|gb|EEL57533.1| Amino acid ABC transporter [Bacillus cereus Rock4-2] Length = 207 Score = 174 bits (441), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 91/206 (44%), Positives = 133/206 (64%), Gaps = 1/206 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L A+ T+P+ I+F+I +I+ A+ RI S I+ I YV I RGTPLLVQLF Sbjct: 1 MLKEAVFTTIPLTLITFIIGIILATLTALARISGSR-ILQWIARIYVSIIRGTPLLVQLF 59 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +IFYGLP + I + + A ++ +LN AY SEIIR+SI+SIPKGQW+A+Y IG+T Q Sbjct: 60 IIFYGLPTLNIEVEPYTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIGMTYPQA 119 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Y+ LI+Y E Sbjct: 120 LKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEFLIVYFEA 179 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHT 221 +Y ++ I+Q +E ++T Sbjct: 180 GLIYWVICFLLSIVQQMLEKRSERYT 205 >gi|238020541|ref|ZP_04600967.1| hypothetical protein GCWU000324_00427 [Kingella oralis ATCC 51147] gi|237867521|gb|EEP68527.1| hypothetical protein GCWU000324_00427 [Kingella oralis ATCC 51147] Length = 227 Score = 174 bits (441), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 88/218 (40%), Positives = 136/218 (62%), Gaps = 4/218 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF----FSDTIISLIMHFYV 62 L++D+F +L A I V++P+A SFV ++I +A +R+ + I + Y+ Sbjct: 7 QLVMDAFVPMLKAGITVSVPMAVASFVCGMMIAVIVAFVRVMPQGGWLHRIFLAVFRVYI 66 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I RGTP+LVQL VIFYGLP + I F A II+ +LN AY SE +R++I+S+PKGQW Sbjct: 67 SIIRGTPMLVQLAVIFYGLPAMNIYFTPIPAAIIAFSLNVGAYGSETVRAAILSVPKGQW 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A ++IG+T QT R II+PQ + + PLS+ FI + K TS+AS +T+ E+F+TAQ+ Sbjct: 127 EAGFSIGMTYMQTFRRIIVPQALRVAVPPLSNSFIGLFKETSLASFVTVTELFRTAQQYG 186 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + Y L +Y E F+Y + ++ Q ++E +H Sbjct: 187 NVGYDFLPVYIEAGFIYWMFCWVLFVTQARLEKHFDRH 224 >gi|303250830|ref|ZP_07337024.1| hypothetical amino-acid ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253267|ref|ZP_07535141.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650343|gb|EFL80505.1| hypothetical amino-acid ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859254|gb|EFM91293.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 238 Score = 174 bits (441), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 89/223 (39%), Positives = 138/223 (61%), Gaps = 4/223 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS----L 56 M L++D+F ++ AA++V++P+A SF+I + I +A+IR+ + ++ Sbjct: 12 MDEARVKLVMDAFLPMVEAAVLVSIPLAIASFIIGMAIAVGVALIRVTPVNGMLHRIALA 71 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I+ Y+ I RGTP+LVQ+ V+FYGLP IG+ D A II +LN AY SE +R++I S Sbjct: 72 IVKVYISIIRGTPMLVQISVVFYGLPAIGVYIDPIPAAIIGFSLNIGAYGSETVRAAISS 131 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +PKGQW+A Y IG+T QT R II PQ I + PLS+ FI + K TS+AS +T+ E+F+ Sbjct: 132 VPKGQWEAGYTIGMTYMQTFRRIIAPQAIRVAVPPLSNTFIGLFKDTSLASVVTVTEMFR 191 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 AQ++ + +Y L +Y E +Y ++IQ K+E + Sbjct: 192 VAQQMANMSYDFLPVYIEAGLIYWCFCWVLFLIQAKLERRFNR 234 >gi|152977983|ref|YP_001343612.1| polar amino acid ABC transporter, inner membrane subunit [Actinobacillus succinogenes 130Z] gi|150839706|gb|ABR73677.1| polar amino acid ABC transporter, inner membrane subunit [Actinobacillus succinogenes 130Z] Length = 238 Score = 174 bits (440), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 93/225 (41%), Positives = 142/225 (63%), Gaps = 18/225 (8%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH------- 59 +L+I++F ++ AA++V++P+A SF+I +II +A+IRI T ++ ++H Sbjct: 18 DLVINAFRPMVEAAVLVSIPLAIASFIIGMIIAVGVALIRI----TPVTGVLHRITLALV 73 Query: 60 -FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y+ I RGTP+LVQ+ V+FYGLP IGI D A II +LN AY SE +R++I S+P Sbjct: 74 KIYISIIRGTPMLVQISVVFYGLPAIGIFIDPIPAAIIGFSLNIGAYASETVRAAISSVP 133 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQW+A Y IG+ QT R II PQ + PLS+ FI + K TS+AS +T+ E+F+ A Sbjct: 134 KGQWEAGYTIGMNYMQTFRRIIAPQAFRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVA 193 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYI---IQIKIESSVTQH 220 Q++ + +Y L +Y E VY FC+I IQ ++E + ++ Sbjct: 194 QQMANMSYDFLPVYIEAGLVYW---CFCWILFFIQARLEKRMARY 235 >gi|229028650|ref|ZP_04184764.1| Amino acid ABC transporter [Bacillus cereus AH1271] gi|228732669|gb|EEL83537.1| Amino acid ABC transporter [Bacillus cereus AH1271] Length = 209 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 92/206 (44%), Positives = 133/206 (64%), Gaps = 1/206 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L A+ T+P+ I+F+I +I+ A+ RI S I+ I YV I RGTPLLVQLF Sbjct: 3 MLKEAVFTTIPLTLITFIIGIILATLTALARISGSR-ILQWIARIYVSIIRGTPLLVQLF 61 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +IFYGLP + I + + A +I +LN AY SEIIR+SI+SIPKGQW+A+Y IG+T Q Sbjct: 62 IIFYGLPTLNIEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIGMTYPQA 121 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Y+ LI+Y E Sbjct: 122 LKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEFLIVYFEA 181 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHT 221 +Y ++ I+Q +E ++T Sbjct: 182 GLIYWVICFLLSIVQQILEKRSERYT 207 >gi|118475743|ref|YP_891955.1| amino-acid ABC transporter permease protein YckJ [Campylobacter fetus subsp. fetus 82-40] gi|118414969|gb|ABK83389.1| probable amino-acid ABC transporter permease protein YckJ [Campylobacter fetus subsp. fetus 82-40] Length = 210 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 90/209 (43%), Positives = 137/209 (65%), Gaps = 4/209 (1%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD----TIISLIMHFYVWIFRGTPLL 71 ++ A+ T+P++ ISF++ + IG +A+IRI S TI+ I FY+ I RGTPLL Sbjct: 1 MIRGAVQYTIPLSLISFILGISIGIMVALIRIDSSKNLLTTILKYICAFYISIIRGTPLL 60 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 VQLF+IFYGLP+IGI + F++ II+ +LN AY SE IR+SI+++PKGQW+A ++IG+ Sbjct: 61 VQLFIIFYGLPNIGITLNPFISSIIAFSLNIGAYSSETIRASILAVPKGQWEAGWSIGMN 120 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 T II PQ + LS+ FIS++K +S+AS + + E+F+ AQ I S Y+ L+ Sbjct: 121 NFDTFTKIIAPQAFKIALPTLSNTFISLVKDSSLASVVLVAELFREAQTIASQNYEFLLT 180 Query: 192 YCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y E A +Y ++ F +Q K+E ++H Sbjct: 181 YSEAALIYWVICIFLGYLQTKLEIKFSKH 209 >gi|223041401|ref|ZP_03611605.1| amino-acid ABC transporter permease [Actinobacillus minor 202] gi|223017791|gb|EEF16197.1| amino-acid ABC transporter permease [Actinobacillus minor 202] Length = 227 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 90/215 (41%), Positives = 139/215 (64%), Gaps = 10/215 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS----LIMHFYV 62 L+ID+F ++ AA++V++P+A SF+I +II +A+IR+ + ++ I+ Y+ Sbjct: 7 KLVIDAFWPMVEAAVLVSIPLAVASFIIGMIIAVGVALIRVTPVNGVLHRIALAIVKVYI 66 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I RGTP+LVQ+ V+FYGLP IG+ D A II +LN AY SE +R++I S+PKGQW Sbjct: 67 SIIRGTPMLVQISVVFYGLPAIGVFIDPIPAAIIGFSLNIGAYASETVRAAISSVPKGQW 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A + IG+T QT R II PQ + + PLS+ FI + K TS+AS +T+ E+F+ AQ++ Sbjct: 127 EAGFTIGMTYMQTFRRIIAPQAVRVAVPPLSNTFIGLFKDTSLASXVTVTEMFRVAQQMA 186 Query: 183 STTYQPLIIYCELAFVYLILTSFCYI---IQIKIE 214 + +Y L +Y E +Y FC++ IQ K+E Sbjct: 187 NMSYDFLPVYIEAGLIYW---CFCWVLFYIQAKLE 218 >gi|229010279|ref|ZP_04167488.1| Amino acid ABC transporter [Bacillus mycoides DSM 2048] gi|229131789|ref|ZP_04260663.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST196] gi|229165791|ref|ZP_04293559.1| Amino acid ABC transporter [Bacillus cereus AH621] gi|228617792|gb|EEK74849.1| Amino acid ABC transporter [Bacillus cereus AH621] gi|228651683|gb|EEL07646.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST196] gi|228750974|gb|EEM00791.1| Amino acid ABC transporter [Bacillus mycoides DSM 2048] Length = 207 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 92/206 (44%), Positives = 133/206 (64%), Gaps = 1/206 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L A+ T+P+ I+F+I +I+ A+ RI S I+ I YV I RGTPLLVQLF Sbjct: 1 MLKEAVFTTIPLTLITFIIGIILATLTALARISGSR-ILQWIARIYVSIIRGTPLLVQLF 59 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +IFYGLP + I + + A +I +LN AY SEIIR+SI+SIPKGQW+A+Y IG+T Q Sbjct: 60 IIFYGLPTLNIEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIGMTYPQA 119 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Y+ LI+Y E Sbjct: 120 LKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEFLIVYFEA 179 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHT 221 +Y ++ I+Q +E ++T Sbjct: 180 GLIYWVICFLLSIVQQILEKRSERYT 205 >gi|240950021|ref|ZP_04754329.1| hypothetical amino-acid ABC transporter permease protein [Actinobacillus minor NM305] gi|240295499|gb|EER46242.1| hypothetical amino-acid ABC transporter permease protein [Actinobacillus minor NM305] Length = 238 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 89/220 (40%), Positives = 141/220 (64%), Gaps = 10/220 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS----LIMHFYV 62 L+ID+F ++ AA++V++P+A SF+I ++I +A+IR+ + ++ I+ Y+ Sbjct: 18 KLVIDAFWPMVEAAVLVSIPLAIASFIIGMVIAVGVALIRVTPVNGVLHRIALAIVKVYI 77 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I RGTP+LVQ+ V+FYGLP IG+ D A II +LN AY SE +R++I S+PKGQW Sbjct: 78 SIIRGTPMLVQISVVFYGLPAIGVFIDPIPAAIIGFSLNIGAYASETVRAAISSVPKGQW 137 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A + IG+T QT R II PQ + + PLS+ FI + K TS+AS +T+ E+F+ AQ++ Sbjct: 138 EAGFTIGMTYMQTFRRIIAPQAVRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMA 197 Query: 183 STTYQPLIIYCELAFVYLILTSFCYI---IQIKIESSVTQ 219 + +Y L +Y E +Y FC++ IQ K+E+ + Sbjct: 198 NMSYDFLPVYIEAGLIYW---CFCWVLFYIQAKLETRFNR 234 >gi|149183272|ref|ZP_01861715.1| amino acid ABC transporter (permease) [Bacillus sp. SG-1] gi|148849032|gb|EDL63239.1| amino acid ABC transporter (permease) [Bacillus sp. SG-1] Length = 221 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 91/218 (41%), Positives = 142/218 (65%), Gaps = 4/218 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +++ S ++ A+ ++P+ ISF +I+ A+ R+ S I+ I YV Sbjct: 2 MDILQSSLLPMVKGALYYSIPLTLISFACGMILAITTALARLSGSK-ILRGIARVYVSAI 60 Query: 66 RGTPLLVQLFVIFYGLPHIGI---VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+IF+GL ++GI FD F + +I+ +LN AY SEI+R++I SIPKGQW Sbjct: 61 RGTPLLVQLFIIFFGLGNLGIEALKFDPFPSAVIAFSLNVGAYASEIVRAAIQSIPKGQW 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A Y+IG+T Q ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I Sbjct: 121 EAGYSIGMTYGQNLKRVILPQAARVSVPPLSNSFISLVKDTSLASLILVTELFRKAQEIA 180 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +TTY+ L++Y E AF+Y ++ +IQ ++ES + ++ Sbjct: 181 ATTYEFLLLYIEAAFLYWVMCFILTLIQDRLESRLDRN 218 >gi|330962037|gb|EGH62297.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 222 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 91/220 (41%), Positives = 139/220 (63%), Gaps = 2/220 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M E L +DS P LL A T+ ++ L++GF +A++R+ + + + Sbjct: 1 MIEESLQLALDSAPFLLKGA-YYTVFLSLGGMFCGLVLGFGLALMRLSRFKPL-NWLARI 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV FRGTPLLVQLF+I+YGLP +GI D A +I +LN +AY EI+RS+I SI +G Sbjct: 59 YVSFFRGTPLLVQLFLIYYGLPELGIELDPLTAALIGFSLNMAAYACEILRSAISSIERG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ +IG+TR QT+R ILPQ T+ PL + FIS++K T++A+TI +PE+F+ AQ Sbjct: 119 QWEAAASIGMTRWQTLRRAILPQAARTALPPLGNSFISLVKDTALAATIQVPELFRQAQL 178 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I + T++ +Y A +Y IL + +Q ++E+ V +H Sbjct: 179 ITARTFEIFTMYLAAALIYWILATALSYLQNRLEARVNRH 218 >gi|307262089|ref|ZP_07543743.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868268|gb|EFN00091.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 238 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 89/218 (40%), Positives = 137/218 (62%), Gaps = 4/218 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS----L 56 M L++D+F ++ AA++V++P+A SF+I + I +A+IR+ + ++ Sbjct: 12 MDEARVKLVMDAFLPMVEAAVLVSIPLAIASFIIGMAIAVGVALIRVTPVNGMLHRIALA 71 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I+ Y+ I RGTP+LVQ+ V+FYGLP IG+ D A II +LN AY SE +R++I S Sbjct: 72 IVKVYISIIRGTPMLVQISVVFYGLPAIGVYIDPIPAAIIGFSLNIGAYGSETVRAAISS 131 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +PKGQW+A Y IG+T QT R II PQ I + PLS+ FI + K TS+AS +T+ E+F+ Sbjct: 132 VPKGQWEAGYTIGMTYMQTFRRIIAPQAIRVAVPPLSNTFIGLFKDTSLASVVTVTEMFR 191 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 AQ++ + +Y L +Y E +Y ++IQ K+E Sbjct: 192 VAQQMANMSYDFLPVYIEAGLIYWCFCWVLFLIQAKLE 229 >gi|307250883|ref|ZP_07532811.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857133|gb|EFM89261.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 238 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 89/223 (39%), Positives = 138/223 (61%), Gaps = 4/223 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS----L 56 M L++D+F ++ AA++V++P+A SF+I + I +A+IR+ + ++ Sbjct: 12 MDEARVKLVMDAFFPMVEAAVLVSIPLAIASFIIGMAIAVGVALIRVTPVNGMLHRIALA 71 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I+ Y+ I RGTP+LVQ+ V+FYGLP IG+ D A II +LN AY SE +R++I S Sbjct: 72 IVKVYISIIRGTPMLVQISVVFYGLPAIGVYIDPIPAAIIGFSLNIGAYGSETVRAAISS 131 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +PKGQW+A Y IG+T QT R II PQ I + PLS+ FI + K TS+AS +T+ E+F+ Sbjct: 132 VPKGQWEAGYTIGMTYMQTFRRIIAPQAIRVAVPPLSNTFIGLFKDTSLASVVTVTEMFR 191 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 AQ++ + +Y L +Y E +Y ++IQ K+E + Sbjct: 192 VAQQMANMSYDFLPVYIEAGLIYWCFCWVLFLIQAKLERRFNR 234 >gi|123442745|ref|YP_001006722.1| putative amino-acid ABC transporter (permease) [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089706|emb|CAL12558.1| putative amino-acid ABC transporter (permease) [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318605288|emb|CBY26786.1| cystine ABC transporter, permease protein [Yersinia enterocolitica subsp. palearctica Y11] Length = 220 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 91/219 (41%), Positives = 138/219 (63%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFY 61 E L++DS P LL A TL ++ L +GF +A++R+ F +SL+ FY Sbjct: 3 ESIQLVLDSAPFLLKGAWF-TLQLSLGGMFFGLALGFMLAMMRLSRFLP---LSLLSRFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I SI KGQ Sbjct: 59 VSIFRGTPLIAQLFMIYYGLPQFGIELDPMPAALIGLSLNTAAYTSETLRAAISSIEKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+TR QT+ +ILPQ T+ PL + FI ++K TS+A+TI +PE+F+ AQ + Sbjct: 119 WEAAASIGMTRWQTLYRVILPQAGRTALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLV 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y I+ + +Q ++E+ V + Sbjct: 179 TSRTLEVFTMYLAASLIYWIMATLLSALQNRLEAHVNRQ 217 >gi|322513148|ref|ZP_08066280.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Actinobacillus ureae ATCC 25976] gi|322121080|gb|EFX92903.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Actinobacillus ureae ATCC 25976] Length = 238 Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 89/223 (39%), Positives = 138/223 (61%), Gaps = 4/223 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS----L 56 M L++D+F ++ AA++V++P+A SF+I + I +A+IR+ + ++ Sbjct: 12 MDEARVKLVMDAFFPMVEAAVLVSIPLAIASFIIGMAIAVGVALIRVTPVNGMLHRIALA 71 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I+ Y+ I RGTP+LVQ+ V+FYGLP IG+ D A II +LN AY SE +R++I S Sbjct: 72 IVKVYISIIRGTPMLVQISVVFYGLPAIGVYIDPIPAAIIGFSLNIGAYGSETVRAAISS 131 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +PKGQW+A Y IG+T QT R II PQ I + PLS+ FI + K TS+AS +T+ E+F+ Sbjct: 132 VPKGQWEAGYTIGMTYMQTFRRIIAPQAIRVAVPPLSNTFIGLFKDTSLASVVTVTEMFR 191 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 AQ++ + +Y L +Y E +Y ++IQ K+E + Sbjct: 192 VAQQMANMSYDFLPVYIEAGLIYWCFCWVLFLIQAKLECRFNR 234 >gi|257460118|ref|ZP_05625222.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Campylobacter gracilis RM3268] gi|257442559|gb|EEV17698.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Campylobacter gracilis RM3268] Length = 222 Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 87/214 (40%), Positives = 136/214 (63%), Gaps = 1/214 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 L+ S + A + VT+P+ ISF++ L++ AV RI + I+ + Y+WIF Sbjct: 8 LELVSSSLEPMALALLQVTIPLTIISFLLGLVLAVLTAVARIA-NFKILKQLSEIYIWIF 66 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF++++GLP +GI D + A II+ +LN AY SE +R++I+S+PKGQW+A+ Sbjct: 67 RGTPLLVQLFIVYFGLPIVGITLDVWAAAIITFSLNIGAYASEAVRAAILSVPKGQWEAA 126 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G++ Q +R II PQ S PLS+ FIS LK TS+ ++IT+ ++F AQRI + Sbjct: 127 TSLGMSYAQILRRIIAPQAARISLPPLSNIFISTLKDTSLVASITMVDMFMVAQRIAARA 186 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + PL +Y A YL + + +Q K+E ++ Sbjct: 187 FDPLTLYVLAALFYLAVCTLLTFLQSKLERRFSR 220 >gi|2108227|gb|AAC45330.1| integral membrane protein-like protein [Lactobacillus reuteri] Length = 233 Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 98/232 (42%), Positives = 145/232 (62%), Gaps = 11/232 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYV 62 + +I S PQLL A T+P+A ISF +II A+ R+ I+ I FYV Sbjct: 2 WEIIKTSLPQLLAAGFKYTIPLAIISFFFGIIIALVTALTRLSRQRGPFMILKWIASFYV 61 Query: 63 WIFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 W+FR TPLLVQLF++F+GLP++ GI + F A II+ +LN AY SE IR++I Sbjct: 62 WLFRSTPLLVQLFIVFFGLPYLRIKGILPHGIKLEPFTAGIITFSLNTGAYASETIRAAI 121 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+P+GQW+A AIG+TR Q + IILPQ + + PLS+ FIS++K TS+A++ITI E+ Sbjct: 122 SSVPRGQWEAGAAIGMTRLQILWRIILPQALRVALPPLSNSFISLVKDTSLAASITIMEM 181 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 F +Q+I + YQPL++Y +A VY + T+ +Q +E V + + ++ Sbjct: 182 FAVSQQIAAENYQPLLMYTLVAMVYAVFTTVLSYLQGYLERIVDRQVNANNR 233 >gi|229171632|ref|ZP_04299207.1| Amino acid ABC transporter [Bacillus cereus MM3] gi|228611778|gb|EEK69025.1| Amino acid ABC transporter [Bacillus cereus MM3] Length = 207 Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 92/206 (44%), Positives = 132/206 (64%), Gaps = 1/206 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L A+ T+P+ I+F+I +I+ A+ RI S I+ I YV I RGTPLLVQLF Sbjct: 1 MLKEAVFTTIPLTLITFIIGIILATLTALARISGSR-ILQWIARIYVSIIRGTPLLVQLF 59 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +IFYGLP + I + + A +I +LN AY SEIIR+SI+SIPKGQW+A+Y IG+T Q Sbjct: 60 IIFYGLPTLNIEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIGMTYPQA 119 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 ++ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Y+ LI+Y E Sbjct: 120 LKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEFLIVYFEA 179 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHT 221 +Y + I+Q +E ++T Sbjct: 180 GLIYWAICFLLSIVQQILEKRSERYT 205 >gi|119964017|ref|YP_946818.1| amino acid ABC transporter permease [Arthrobacter aurescens TC1] gi|119950876|gb|ABM09787.1| putative amino acid ABC transporter, permease protein [Arthrobacter aurescens TC1] Length = 219 Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 88/215 (40%), Positives = 139/215 (64%), Gaps = 1/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++LI SF L+ A+ T+P+ SF L++ +A++R+ + ++S I FYV + Sbjct: 3 WDLIWSSFGPLITGAVTGTIPLTLASFAFGLVLALVVALMRLS-PNWLLSGIGRFYVSVI 61 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLFVIF+GLP IGI D + + II+ +LN Y +EIIR++I+S+PKGQW+A Sbjct: 62 RGTPLLVQLFVIFFGLPSIGIRLDPWPSAIIAFSLNVGGYAAEIIRAAILSVPKGQWEAG 121 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 + IG++R Q + IILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ+I + + Sbjct: 122 HTIGMSRPQALVRIILPQAARVSVPPLSNTFISLVKDTSLASLILVTELFRNAQQIAAFS 181 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + + +Y + A VY ++ Q +E + ++ Sbjct: 182 QEFMALYLQAALVYWVICLVLSTAQSAVEKRLDRY 216 >gi|218283496|ref|ZP_03489486.1| hypothetical protein EUBIFOR_02076 [Eubacterium biforme DSM 3989] gi|218215764|gb|EEC89302.1| hypothetical protein EUBIFOR_02076 [Eubacterium biforme DSM 3989] Length = 218 Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 87/203 (42%), Positives = 136/203 (66%), Gaps = 4/203 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L ++SFP++ + IV+TLP+A +SF+I+++I A+I+ + I I+ FY+WIFR Sbjct: 2 ELFLESFPKIFISGIVITLPLALVSFIIAMLIAIVCAIIQ-YAKVPIAKNIVQFYIWIFR 60 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTP+LVQLF++++G+ IG+ + A II +LN AY +E IR SI S+P+GQ +A Y Sbjct: 61 GTPMLVQLFIMYFGMQSIGVRISAITAAIIVFSLNTGAYCAETIRGSIESVPQGQMEAGY 120 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +G++ Q + HIILPQ ++ L + IS++K TS+A+ IT+ E+F +RI TY Sbjct: 121 CVGMSYMQIMMHIILPQAFRSAFPSLFNNLISLVKDTSLAANITVTEMFMQTERIAGRTY 180 Query: 187 QPLIIYCELAFVYLILTSFCYII 209 Q + +Y E+AFVYLI FC ++ Sbjct: 181 QFMQLYIEVAFVYLI---FCTVL 200 >gi|2507497|sp|P45023|Y1079_HAEIN RecName: Full=Probable amino-acid ABC transporter permease protein HI_0179 gi|1574633|gb|AAC22735.1| amino acid ABC transporter, permease protein [Haemophilus influenzae Rd KW20] Length = 210 Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 137/212 (64%), Gaps = 10/212 (4%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----ISLIMHFYVWIFRGTPLL 71 +L AAI+ TLP+A ISF L+I +AVIR S + + + Y+ I RGTP+L Sbjct: 1 MLEAAILYTLPLAVISFFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYISIIRGTPML 60 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 VQ+F+IFYGLP +GI + F II+ ++N AY +E +R+SII+IPKGQW+ASYAIG+ Sbjct: 61 VQIFIIFYGLPEVGITLEPFPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMN 120 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 +Q I+PQ + S LS+ FIS +K TS+AS + + E+F+ AQ I + Y+ ++I Sbjct: 121 YRQAFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFRVAQNITAANYEFILI 180 Query: 192 YCELAFVYLILTSFCYI---IQIKIESSVTQH 220 Y E A +Y I FC++ +Q ++E +++H Sbjct: 181 YSEAALIYWI---FCFVLSFLQDRLEIRLSRH 209 >gi|22126342|ref|NP_669765.1| ABC transporter permease for cystine [Yersinia pestis KIM 10] gi|45441365|ref|NP_992904.1| putative amino acid ABC transporter permease [Yersinia pestis biovar Microtus str. 91001] gi|108807219|ref|YP_651135.1| putative amino-acid ABC transporter permease [Yersinia pestis Antiqua] gi|108812437|ref|YP_648204.1| amino-acid ABC transporter (permease) [Yersinia pestis Nepal516] gi|145598568|ref|YP_001162644.1| amino-acid ABC transporter (permease) [Yersinia pestis Pestoides F] gi|149366207|ref|ZP_01888242.1| putative amino-acid ABC transporter (permease) [Yersinia pestis CA88-4125] gi|162420463|ref|YP_001606502.1| amino acid ABC transporter permease [Yersinia pestis Angola] gi|165926030|ref|ZP_02221862.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165938721|ref|ZP_02227276.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|166010948|ref|ZP_02231846.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166210693|ref|ZP_02236728.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167401053|ref|ZP_02306556.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420087|ref|ZP_02311840.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425831|ref|ZP_02317584.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469082|ref|ZP_02333786.1| amino acid ABC transporter, permease protein [Yersinia pestis FV-1] gi|218928966|ref|YP_002346841.1| putative amino-acid ABC transporter (permease) [Yersinia pestis CO92] gi|229896295|ref|ZP_04511465.1| predicted transporter subunit: membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|229897232|ref|ZP_04512388.1| predicted transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229897959|ref|ZP_04513110.1| predicted transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229902810|ref|ZP_04517927.1| predicted transporter subunit: membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|270486599|ref|ZP_06203673.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294503990|ref|YP_003568052.1| putative amino-acid ABC transporter (permease) [Yersinia pestis Z176003] gi|21959324|gb|AAM86016.1|AE013849_7 putative ABC transporter permease for cystine [Yersinia pestis KIM 10] gi|45436225|gb|AAS61781.1| putative amino-acid ABC transporter (permease) [Yersinia pestis biovar Microtus str. 91001] gi|108776085|gb|ABG18604.1| amino-acid ABC transporter (permease) [Yersinia pestis Nepal516] gi|108779132|gb|ABG13190.1| putative amino-acid ABC transporter (permease) [Yersinia pestis Antiqua] gi|115347577|emb|CAL20487.1| putative amino-acid ABC transporter (permease) [Yersinia pestis CO92] gi|145210264|gb|ABP39671.1| amino-acid ABC transporter (permease) [Yersinia pestis Pestoides F] gi|149292620|gb|EDM42694.1| putative amino-acid ABC transporter (permease) [Yersinia pestis CA88-4125] gi|162353278|gb|ABX87226.1| amino acid ABC transporter, permease protein [Yersinia pestis Angola] gi|165913335|gb|EDR31957.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|165922234|gb|EDR39411.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165990292|gb|EDR42593.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166207873|gb|EDR52353.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166961782|gb|EDR57803.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049442|gb|EDR60850.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055230|gb|EDR65027.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229680257|gb|EEO76356.1| predicted transporter subunit: membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|229689000|gb|EEO81065.1| predicted transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229693569|gb|EEO83618.1| predicted transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701218|gb|EEO89247.1| predicted transporter subunit: membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|262361825|gb|ACY58546.1| putative amino-acid ABC transporter (permease) [Yersinia pestis D106004] gi|262366039|gb|ACY62596.1| putative amino-acid ABC transporter (permease) [Yersinia pestis D182038] gi|270335103|gb|EFA45880.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294354449|gb|ADE64790.1| putative amino-acid ABC transporter (permease) [Yersinia pestis Z176003] gi|320015412|gb|ADV98983.1| putative transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 220 Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 91/219 (41%), Positives = 139/219 (63%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFY 61 E L++DS P LL A + TL ++ L++GF +A++R+ F+ SLI FY Sbjct: 3 ESMQLVLDSAPFLLKGAWL-TLQLSLGGMFFGLLLGFMLAMMRLSHFWP---FSLISRFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V IFRGTPL+ QLF+I+YGLP GI + A +I L+LN +AY SE +R++I SI KGQ Sbjct: 59 VSIFRGTPLIAQLFMIYYGLPQFGIELEPMPAALIGLSLNTAAYTSETLRAAISSIEKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+TR Q + +ILPQ T+ PL + FI ++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTRWQALYRVILPQAGRTALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y I+ + +Q ++E+ V + Sbjct: 179 TSRTMEVFTMYLAASLIYWIMATLLSALQNRLEAHVNRQ 217 >gi|332161362|ref|YP_004297939.1| putative amino-acid ABC transporter [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665592|gb|ADZ42236.1| putative amino-acid ABC transporter [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859509|emb|CBX69852.1| inner membrane amino-acid ABC transporter permease protein yecS [Yersinia enterocolitica W22703] Length = 220 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 90/219 (41%), Positives = 138/219 (63%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFY 61 E L++DS P LL A TL ++ L +GF +A++R+ F +SL+ FY Sbjct: 3 ESIQLVLDSAPFLLKGAWF-TLQLSLGGMFFGLALGFMLAMMRLSRFLP---LSLLSRFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I SI KGQ Sbjct: 59 VSIFRGTPLIAQLFMIYYGLPQFGIELDPMPAALIGLSLNTAAYTSETLRAAISSIEKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+TR QT+ +ILPQ ++ PL + FI ++K TS+A+TI +PE+F+ AQ + Sbjct: 119 WEAAASIGMTRWQTLYRVILPQAGRSALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLV 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y I+ + +Q ++E+ V + Sbjct: 179 TSRTLEVFTMYLAASLIYWIMATLLSALQNRLEAHVNRQ 217 >gi|315635186|ref|ZP_07890464.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aggregatibacter segnis ATCC 33393] gi|315476148|gb|EFU66902.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aggregatibacter segnis ATCC 33393] Length = 240 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 91/224 (40%), Positives = 137/224 (61%), Gaps = 4/224 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----ISL 56 M E + +I SF +L AAI T+P+A ISF + I +A+IRI + + + Sbjct: 14 MNAERADEVISSFWPMLEAAIDKTIPLAVISFFAGVAIALIVALIRIVEKPNLGMRLLQI 73 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV RGTP+LVQ+F+IFYGLP +GI D F II+ ++N AY SE IR++I+S Sbjct: 74 LCRIYVSTIRGTPMLVQIFIIFYGLPEVGIKLDPFPTAIIAFSINIGAYASETIRAAILS 133 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQW+ASY+IG+ QT I+ Q + S PL++ FIS +K TS+AS + + E+F+ Sbjct: 134 IPKGQWEASYSIGMNYYQTFTRTIMTQALRVSVPPLANTFISNVKDTSLASLVLVTEMFR 193 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 AQ I + Y+ ++IY E A +Y + Q ++E +++H Sbjct: 194 VAQNITAENYEFIMIYSEAALIYWCICLILSFAQDRLEQRLSRH 237 >gi|187779934|ref|ZP_02996407.1| hypothetical protein CLOSPO_03530 [Clostridium sporogenes ATCC 15579] gi|187773559|gb|EDU37361.1| hypothetical protein CLOSPO_03530 [Clostridium sporogenes ATCC 15579] Length = 219 Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 90/204 (44%), Positives = 136/204 (66%), Gaps = 4/204 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+++ + P LL A +V T+ I +SF++++I+ F + V+R + I+ LI++ YV IF Sbjct: 5 FDIVFRNLPFLLKATLV-TIKITLLSFIVAIILAFIVGVLRTYKFSKILDLILNAYVEIF 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG+PLL+QLF I+YGLP +GI D+ VA +I L LN +AY+SEIIR++I+SI +GQ +A Sbjct: 64 RGSPLLIQLFFIYYGLPSVGIAMDAEVAAVIGLALNGAAYMSEIIRAAILSIDRGQEEAG 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +++G TR Q +R+IILPQ S PL + F S+LK TS+ S I+I E+ ++ I S T Sbjct: 124 FSLGYTRFQNLRYIILPQAAQISVPPLVNGFSSLLKDTSLVSVISITELTRSGNLIYSRT 183 Query: 186 YQPLIIYCELAFVYLILT---SFC 206 +P +Y L Y +LT S C Sbjct: 184 ARPFEVYLTLGLFYFVLTYIVSLC 207 >gi|332289643|ref|YP_004420495.1| glutamine ABC transporter permease protein [Gallibacterium anatis UMN179] gi|330432539|gb|AEC17598.1| glutamine ABC transporter permease protein [Gallibacterium anatis UMN179] Length = 249 Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 87/215 (40%), Positives = 132/215 (61%), Gaps = 4/215 (1%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLIMHFYVWIF 65 ID+F +L I+ T+P+ ISF++ ++I IA++R+ F I + FY+ Sbjct: 32 IDAFFPMLQGMILYTIPLTIISFIVGMVIALAIALLRVTPRKHFLHKIAYALSGFYISAI 91 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLL QLF+IFY LP++GI D II+ +LN AY SE +R++I+S+PKGQW+A Sbjct: 92 RGTPLLAQLFIIFYALPNVGITLDPLPTAIIAFSLNTGAYASETVRAAILSVPKGQWEAG 151 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y IG++ Q II PQ + + PLS+ FI +LK TS+AS + +PE+ + A I S T Sbjct: 152 YTIGMSYWQNFFRIIAPQALRVAVPPLSNSFIGLLKETSLASVVLVPEMMRQANVISSRT 211 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y+ L++YCE A +Y I + Q ++E ++ Sbjct: 212 YEFLLVYCEAALIYWIACAILGYAQQRLEKHFERY 246 >gi|325528848|gb|EGD05896.1| amino acid ABC transporter inner membrane protein [Burkholderia sp. TJI49] Length = 219 Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 84/212 (39%), Positives = 137/212 (64%), Gaps = 2/212 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E +L+I + P ++ A +TL A S ++ L+ G IAV+RI + + I YV Sbjct: 2 EALDLVIHTLPVMVQGA-ALTLKFAVSSMMLGLLAGLAIAVVRIG-GNRFAAGIAQGYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQ+FV++YGLP +GI D A I +LTLN +AY+SE +R +I+ I +GQW Sbjct: 60 VMRGTPLLVQMFVVYYGLPDLGITLDPTTAGIFTLTLNAAAYLSESMRGAILGIGRGQWA 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A++++GLT QT+R++I PQ + + L + IS++K TS+ S IT+ E+ ++ Q +++ Sbjct: 120 AAHSLGLTHVQTLRYVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIA 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 T+QPL +Y A +Y +L++ +Q ++ES Sbjct: 180 ATFQPLPLYLAAAAIYWVLSTLLSRLQGRVES 211 >gi|16125689|ref|NP_420253.1| cystine ABC transporter permease [Caulobacter crescentus CB15] gi|221234444|ref|YP_002516880.1| cystine transport system permease protein [Caulobacter crescentus NA1000] gi|13422805|gb|AAK23421.1| cystine ABC tranporter, permease protein, putative [Caulobacter crescentus CB15] gi|220963616|gb|ACL94972.1| cystine transport system permease protein [Caulobacter crescentus NA1000] Length = 219 Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 87/215 (40%), Positives = 135/215 (62%), Gaps = 2/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +L+ S P LL A T+ ++ I I +++GF +A++R+ S ++ YV F Sbjct: 5 LDLLRQSAPLLLKGA-GYTIVLSVIGMSIGVVLGFLLALMRLSRS-ALLRWPAGVYVSAF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+I+YGLP G+ VA I +LN +AY EI+RS+I ++ KGQW+A+ Sbjct: 63 RGTPLLVQLFLIYYGLPQFGLEMPPLVAAGIGFSLNVAAYSCEILRSAIAAVDKGQWEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +G++R QT+R +ILPQ T+ PLS+ FIS++K TS+A+TI +PE+F+ AQ I + T Sbjct: 123 SVLGMSRGQTLRRVILPQAARTAVAPLSNSFISLVKDTSLAATIQVPELFRQAQLITART 182 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y+ +Y A +Y IL++ Q ++E + Sbjct: 183 YEIFTLYLAAAAIYWILSTILAAAQTRLERRAAEG 217 >gi|307255512|ref|ZP_07537318.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307257682|ref|ZP_07539441.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307259963|ref|ZP_07541676.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306861554|gb|EFM93542.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306863857|gb|EFM95781.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865991|gb|EFM97866.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 238 Score = 171 bits (432), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 89/223 (39%), Positives = 137/223 (61%), Gaps = 4/223 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS----L 56 M L++D+F ++ AA++V++P+A SF+I + I +A+IR+ + ++ Sbjct: 12 MDEARVKLVMDAFFPMVEAAVLVSIPLAIASFIIGMAIAVGVALIRVTPVNGMLHRIALA 71 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I+ Y+ I RGTP+LVQ+ V+FYGLP IG+ D A II +LN AY SE +R++I S Sbjct: 72 IVKVYISIIRGTPMLVQISVVFYGLPAIGVYIDPIPAAIIGFSLNIGAYGSETVRAAISS 131 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +PKGQW+A Y IG+T QT R II PQ I PLS+ FI + K TS+AS +T+ E+F+ Sbjct: 132 VPKGQWEAGYTIGMTYMQTFRRIIAPQAIRVVIPPLSNTFIGLFKDTSLASVVTVTEMFR 191 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 AQ++ + +Y L +Y E +Y ++IQ K+E + Sbjct: 192 VAQQMANMSYDFLPVYIEAGLIYWCFCWVLFLIQAKLERRFNR 234 >gi|78061685|ref|YP_371593.1| amino acid ABC transporter inner membrane protein [Burkholderia sp. 383] gi|77969570|gb|ABB10949.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia sp. 383] Length = 219 Score = 171 bits (432), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 138/212 (65%), Gaps = 2/212 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E L++ + P ++ A++ TL A S + L++G IA++RI S+ + + + YV Sbjct: 2 EALQLVVHTLPVMVKGAML-TLKFAVASMALGLVVGLVIAIMRIG-SNRLAASLAQGYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQ+FV++YGLP +GI D A I +LTLN AY+SE +R +I+ I +GQW Sbjct: 60 LMRGTPLLVQMFVVYYGLPDLGITLDPTTAGIFTLTLNAGAYLSESMRGAILGIGRGQWA 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A++++GLT QT+R+++ PQ + + L + IS++K TS+ S IT+ E+ ++ Q +++ Sbjct: 120 AAHSLGLTHVQTLRYVVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIA 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 T+QPL +Y A +Y +L++ +Q ++E+ Sbjct: 180 ATFQPLPLYLAAAAIYWVLSTLLTRLQGRVET 211 >gi|308187256|ref|YP_003931387.1| ABC transport system permease protein [Pantoea vagans C9-1] gi|308057766|gb|ADO09938.1| Putative ABC transport system permease protein [Pantoea vagans C9-1] Length = 222 Score = 171 bits (432), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 88/219 (40%), Positives = 138/219 (63%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFY 61 E L++DS P LL A+ TL ++ L++GF +A++R+ F+ + + Y Sbjct: 3 ESLQLVLDSAPFLLKGALF-TLQLSIGGMFFGLLLGFILALMRLSRFWP---VRWLARIY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY SE +R +I SI +GQ Sbjct: 59 VSIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYASESLRGAIASIERGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+TR QT+R +ILPQ T+ PL + FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTRWQTLRRVILPQAARTALPPLGNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y ++ + +Q ++E V + Sbjct: 179 TSRTLEVFTMYLAASLIYWVMATVLSALQNRLEQHVNRQ 217 >gi|317048575|ref|YP_004116223.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316950192|gb|ADU69667.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 222 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 89/219 (40%), Positives = 140/219 (63%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFY 61 E L++DS P LL A V TL ++ LI+GF +A++R+ F+ ++ + FY Sbjct: 3 ESLQLVLDSAPFLLKGA-VFTLQLSIGGMFFGLILGFVLALMRLSHFWP---VNWLARFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY SE +R +I +I +GQ Sbjct: 59 VSIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYASESLRGAIAAIERGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R +ILPQ T+ PL + FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQTLRRVILPQAARTALPPLGNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y ++ + +Q ++E+ V + Sbjct: 179 TSRTLEVFTMYLAASVIYWVMATVLSALQNRLEAHVNRQ 217 >gi|237731964|ref|ZP_04562445.1| polar amino acid ABC transporter [Citrobacter sp. 30_2] gi|226907503|gb|EEH93421.1| polar amino acid ABC transporter [Citrobacter sp. 30_2] Length = 222 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 90/219 (41%), Positives = 137/219 (62%), Gaps = 4/219 (1%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMHFY 61 +E L+IDS P LL A V TL ++ L++GF +A++R+ S + + + FY Sbjct: 2 HESIQLVIDSLPYLLKGA-VFTLQLSIGGMFFGLVLGFILALMRL--SPLLPVRWLARFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY +E +R++I SI KGQ Sbjct: 59 ISIFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYAAETLRAAISSIDKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A +IG+TR QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAGASIGMTRWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y ++ + +Q E + + Sbjct: 179 TSRTLEVFTMYLAASLIYWVMATVLSALQNYFEEQLNRQ 217 >gi|53729251|ref|ZP_00133781.2| COG0765: ABC-type amino acid transport system, permease component [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209068|ref|YP_001054293.1| amino acid ABC transporter permease [Actinobacillus pleuropneumoniae L20] gi|126097860|gb|ABN74688.1| hypothetical amino-acid ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 227 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 89/218 (40%), Positives = 136/218 (62%), Gaps = 4/218 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS----L 56 M L++D+F ++ AA++V++P+A SF+I + I +A+IR+ + ++ Sbjct: 1 MDEARVKLVMDAFFPMVEAAVLVSIPLAIASFIIGMAIAVGVALIRVTPVNGMLHRIALA 60 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I+ Y+ I RGTP+LVQ+ V+FYGLP IG+ D A II +LN AY SE +R++I S Sbjct: 61 IVKVYISIIRGTPMLVQISVVFYGLPAIGVYIDPIPAAIIGFSLNIGAYGSETVRAAISS 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +PKGQW+A Y IG+T QT R II PQ I PLS+ FI + K TS+AS +T+ E+F+ Sbjct: 121 VPKGQWEAGYTIGMTYMQTFRRIIAPQAIRVVIPPLSNTFIGLFKDTSLASVVTVTEMFR 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 AQ++ + +Y L +Y E +Y ++IQ K+E Sbjct: 181 VAQQMANMSYDFLPVYIEAGLIYWCFCWVLFLIQAKLE 218 >gi|190150935|ref|YP_001969460.1| amino-acid ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264289|ref|ZP_07545878.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189916066|gb|ACE62318.1| hypothetical amino-acid ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870353|gb|EFN02108.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 238 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 89/218 (40%), Positives = 136/218 (62%), Gaps = 4/218 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS----L 56 M L++D+F ++ AA++V++P+A SF+I + I +A+IR+ + ++ Sbjct: 12 MDEARVKLVMDAFFPMVEAAVLVSIPLAIASFIIGMAIAVGVALIRVTPVNGMLHRIALA 71 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I+ Y+ I RGTP+LVQ+ V+FYGLP IG+ D A II +LN AY SE +R++I S Sbjct: 72 IVKVYISIIRGTPMLVQISVVFYGLPAIGVYIDPIPAAIIGFSLNIGAYGSETVRAAISS 131 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +PKGQW+A Y IG+T QT R II PQ I PLS+ FI + K TS+AS +T+ E+F+ Sbjct: 132 VPKGQWEAGYTIGMTYMQTFRRIIAPQAIRVVIPPLSNTFIGLFKDTSLASVVTVTEMFR 191 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 AQ++ + +Y L +Y E +Y ++IQ K+E Sbjct: 192 VAQQMANMSYDFLPVYIEAGLIYWCFCWVLFLIQAKLE 229 >gi|322833173|ref|YP_004213200.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321168374|gb|ADW74073.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 222 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 89/219 (40%), Positives = 138/219 (63%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFY 61 E L++DS P LL + TL ++ V LI+GF +A++R+ F+ +S + FY Sbjct: 3 ESIQLVLDSAPFLLKGTLF-TLQLSLGGMVFGLILGFVLALMRLSHFWP---LSWLSRFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V +FRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I SI KGQ Sbjct: 59 VSVFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISSIEKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+ QT+R +ILPQ T+ PL + FI ++K TS+A+TI +PE+F+ AQ + Sbjct: 119 WEAAASIGMNPWQTMRRVILPQAARTALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLV 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y +L + +Q ++E V + Sbjct: 179 TSRTLEVFTMYLAASVIYWVLATVLSFLQNRLEDRVNRQ 217 >gi|83646476|ref|YP_434911.1| amino acid ABC transporter permease [Hahella chejuensis KCTC 2396] gi|83634519|gb|ABC30486.1| ABC-type amino acid transport system, permease component [Hahella chejuensis KCTC 2396] Length = 222 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 87/215 (40%), Positives = 135/215 (62%), Gaps = 2/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 LI DS P LL A T+ ++ LI+GF +A++R+ S + Y+ F Sbjct: 6 LKLIADSAPFLLKGA-GYTVGLSLGGMFFGLILGFTLAMMRLS-SFRALDWTARVYISFF 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+I+YGLP +G+ + A +I +LN +AY +EI+R++I SI +GQW+A+ Sbjct: 64 RGTPLLVQLFMIYYGLPQLGVRLEPLTAALIGFSLNMAAYAAEILRAAIASIDRGQWEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IG+TR QT+ ILPQ T+ PL + FIS++K T++A+TI +PE+F+ AQ I + T Sbjct: 124 ASIGMTRTQTLYRTILPQAARTALPPLGNSFISLVKDTALAATIQVPELFRQAQLITART 183 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ +Y A +Y +L S +Q ++E+ V H Sbjct: 184 FEIFTMYLAAALIYWVLASVLAHLQNRLEARVNLH 218 >gi|186474261|ref|YP_001861603.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184196593|gb|ACC74557.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 219 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 86/208 (41%), Positives = 138/208 (66%), Gaps = 2/208 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L+I++ P LL A+V TL A S V+ L++GF +A++ I II+ I YV + R Sbjct: 5 DLVINTLPVLLLGAMV-TLKFALASAVLGLLVGFIVAIMGIS-GQPIIAGIARAYVSLMR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+FV++YGLP +GI D A I++LT N AY+SE +R +I+ I +GQW A++ Sbjct: 63 GTPLLVQIFVVYYGLPDLGISLDPTSAGILALTANAGAYLSESMRGAILGISQGQWGAAH 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GLT QT+R++I PQ + + L + IS++K TS+ S IT+ E+ + AQ ++++T+ Sbjct: 123 SLGLTHMQTLRYVICPQALRMAVPSLGNTLISLIKDTSLVSVITVTEMLRAAQEVIASTF 182 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIE 214 QPL +Y A +Y +L++ +Q +E Sbjct: 183 QPLPLYLAAAAIYWLLSTGMSWVQRHVE 210 >gi|111018891|ref|YP_701863.1| ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] gi|110818421|gb|ABG93705.1| ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] Length = 222 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 88/214 (41%), Positives = 136/214 (63%), Gaps = 1/214 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 LI+D+ +L A + +T+P+ ISF I L+I +A+ RI S +S+I FYV I R Sbjct: 7 QLILDNLWPMLKATVTMTIPLTIISFTIGLVIALLMALARIS-SIRPLSVIARFYVSIIR 65 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQLF++FY LP G+V D F A +I+ +LN Y +E+IRS+I+SIPKGQW+A+ Sbjct: 66 GTPLLVQLFIVFYALPQFGVVLDPFPAAVIAFSLNVGGYAAEVIRSAILSIPKGQWEAAQ 125 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 IG+ T++ I+LPQ + PLS+ IS++K TS+ASTI + E+ + AQ + T+ Sbjct: 126 TIGMGYTTTLQRIVLPQAARVAVPPLSNTLISLVKDTSLASTILVTELLRVAQLAAAPTF 185 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +Y A Y ++ F +Q ++E+ + ++ Sbjct: 186 DFFALYSVAALYYWVICIFLSAVQGRLEARLDRY 219 >gi|184199755|ref|YP_001853962.1| putative amino acid ABC transporter permease protein [Kocuria rhizophila DC2201] gi|183579985|dbj|BAG28456.1| putative amino acid ABC transporter permease protein [Kocuria rhizophila DC2201] Length = 224 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 83/211 (39%), Positives = 140/211 (66%), Gaps = 1/211 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 ++ +L DS PQLL A + VT+P++ I+FV++L++ +R+ + I FYVW Sbjct: 3 DFLSLWADSLPQLLLATVKVTIPLSIIAFVLALVVAVLATAMRLS-GIRPLQWISRFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 +FRGTP+LVQLF+IFYGLP GI ++ + I++ TLN AY +E +R+S+ SIP+GQ + Sbjct: 62 LFRGTPILVQLFIIFYGLPAAGITLSAWTSAILAFTLNTGAYAAETLRASVQSIPRGQLE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ + T QT+RH++ PQ + + PL ++ I ++K TS+ IT+ ++FQ ++I + Sbjct: 122 AARTLNYTGWQTVRHVVAPQALRIALPPLGNDLIDLVKGTSLVMVITLADVFQVGRQIAA 181 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 T +QPL +Y E+A +YL + + ++Q ++E Sbjct: 182 TNFQPLALYAEVAVIYLAIFTVLSLLQSRLE 212 >gi|163839275|ref|YP_001623680.1| cystine transport system, permease protein [Renibacterium salmoninarum ATCC 33209] gi|162952751|gb|ABY22266.1| cystine transport system, permease protein [Renibacterium salmoninarum ATCC 33209] Length = 219 Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 88/215 (40%), Positives = 143/215 (66%), Gaps = 1/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++LI S +L A+ T+P+A SF I L++ +A++RI + +++ I FY+ + Sbjct: 3 WDLIWSSLGPILLGAVTATIPLALASFAIGLVLALAVALLRIS-RNLVLAGIGRFYISVI 61 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLFVIFYGLP IG+ D + + II+L+LN Y +E+IR++I+S+PKGQW+A Sbjct: 62 RGTPLLVQLFVIFYGLPSIGVKLDPWPSAIIALSLNVGGYAAEVIRAAILSVPKGQWEAG 121 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 + IG++R Q++ IILPQ S PLS+ FIS++K TS+AS I + E+F+ +Q+I + + Sbjct: 122 HMIGMSRGQSLFRIILPQAARVSLPPLSNTFISLIKDTSLASLILVTELFKESQKIAAVS 181 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +++Y E A VY ++ IQ ++ + ++ Sbjct: 182 RDFMVLYLEAALVYWVICLVLSTIQSQLAKRLDRY 216 >gi|304398822|ref|ZP_07380692.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304353526|gb|EFM17903.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 222 Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 88/219 (40%), Positives = 138/219 (63%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFY 61 E L++DS P LL A+ TL ++ L++GF +A++R+ F+ + + Y Sbjct: 3 ESLQLVLDSAPFLLKGALF-TLQLSIGGMFFGLLLGFILALMRLSRFWP---VRWLARIY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY SE +R +I SI +GQ Sbjct: 59 VSIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYASESLRGAISSIERGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+TR QT+R +ILPQ T+ PL + FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTRWQTLRRVILPQAARTALPPLGNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y ++ + +Q ++E V + Sbjct: 179 TSRTLEVFTMYLAASLIYWVMATVLSALQNRLEQHVNRQ 217 >gi|283832682|ref|ZP_06352423.1| L-cystine ABC transporter, permease protein [Citrobacter youngae ATCC 29220] gi|291072357|gb|EFE10466.1| L-cystine ABC transporter, permease protein [Citrobacter youngae ATCC 29220] Length = 222 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 89/218 (40%), Positives = 136/218 (62%), Gaps = 4/218 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMHFYV 62 E L+IDS P LL A V TL ++ L++GF +A++R+ S + + + FY+ Sbjct: 3 ESIQLVIDSLPYLLKGA-VFTLQLSIGGMFFGLVLGFILALMRL--SPLLPVRWLARFYI 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +FRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY +E +R++I SI KGQW Sbjct: 60 SVFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYAAETLRAAISSIDKGQW 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A +IG+TR QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 120 EAGASIGMTRWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLIT 179 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y ++ + +Q E + + Sbjct: 180 SRTLEVFTMYLAASLIYWVMATVLSALQNYFEEQLNRQ 217 >gi|34499507|ref|NP_903722.1| amino acid ABC transporter permease [Chromobacterium violaceum ATCC 12472] gi|34105357|gb|AAQ61712.1| probable amino acid ABC transporter, permease protein [Chromobacterium violaceum ATCC 12472] Length = 220 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 86/215 (40%), Positives = 135/215 (62%), Gaps = 2/215 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EW L + P LL A TL A ++ V+ L +GF +A++R+ ++S + FYV Sbjct: 3 EWMALFEAALPVLLQGA-AHTLLFALVAMVLGLALGFAVAMVRVA-KLPVLSQLAAFYVS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RGTPLLVQ+FVI+YGLP +G+ D A +++LTLN +AY+SE +R I + KGQWD Sbjct: 61 AMRGTPLLVQIFVIYYGLPGVGLELDPVPAGVLALTLNVAAYLSESLRGGIAGVAKGQWD 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A++++G T QT+RHII PQ + S LS+ IS++K TS+ S IT+ E+ + +++ Sbjct: 121 AAFSLGFTWWQTMRHIIAPQALRLSVPSLSNSLISLIKDTSLVSVITVTELMLATKEVIA 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 T+QPL +Y A +Y +L++ +Q +E+ + Sbjct: 181 QTFQPLPLYLAAAAIYWLLSALFERLQRHVENRLN 215 >gi|254362205|ref|ZP_04978320.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica PHL213] gi|153093777|gb|EDN74716.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica PHL213] Length = 238 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 88/213 (41%), Positives = 135/213 (63%), Gaps = 6/213 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIISLIMHFY 61 +L++ F ++ AA +V++P+A SF+I ++I +A++RI FF ++ L+ Y Sbjct: 18 DLVLSGFWPMVQAAFLVSIPLAIASFIIGMLIAVAVALVRISPATGFFHRLLLWLVKG-Y 76 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + I RGTP+LVQ+ ++FYGLP IGI D A II +LN AY SE IR++I S+PKGQ Sbjct: 77 ISIIRGTPMLVQICIVFYGLPAIGIFIDPIPAAIIGFSLNIGAYGSETIRAAISSVPKGQ 136 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A Y IG+T QT R II PQ + PLS+ FI + K TS+AS +T+ E+F+ AQ++ Sbjct: 137 WEAGYTIGMTYMQTFRRIIAPQAFRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQV 196 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + +Y L +Y E +Y ++IQ ++E Sbjct: 197 ANMSYDFLPVYIEAGLIYWCFCWVLFLIQARLE 229 >gi|291617813|ref|YP_003520555.1| YecS [Pantoea ananatis LMG 20103] gi|291152843|gb|ADD77427.1| YecS [Pantoea ananatis LMG 20103] gi|327394230|dbj|BAK11652.1| inner membrane amino-acid ABC transporter permease protein YecS [Pantoea ananatis AJ13355] Length = 222 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 86/219 (39%), Positives = 139/219 (63%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFY 61 E L++DS P LL A+ TL ++ LI+GF +A++R+ F+ ++ + Y Sbjct: 3 ESLQLVLDSAPFLLKGALF-TLQLSIGGMFFGLILGFLLALMRLSRFWP---VNWLARIY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY SE +R +I +I +GQ Sbjct: 59 VSIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNMAAYASESLRGAIAAIERGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R ++LPQ T+ PL + FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQTLRRVVLPQAARTALPPLGNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y ++ + +Q ++E+ V + Sbjct: 179 TSRTLEVFTMYLAASLIYWVMATVLSALQNRLEAHVNRQ 217 >gi|261493138|ref|ZP_05989673.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495783|ref|ZP_05992219.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308548|gb|EEY09815.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311193|gb|EEY12361.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 227 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 88/213 (41%), Positives = 135/213 (63%), Gaps = 6/213 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIISLIMHFY 61 +L++ F ++ AA +V++P+A SF+I ++I +A++RI FF ++ L+ Y Sbjct: 7 DLVLSGFWPMVQAAFLVSIPLAIASFIIGMLIAVAVALVRISPATGFFHRLLLWLVKG-Y 65 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + I RGTP+LVQ+ ++FYGLP IGI D A II +LN AY SE IR++I S+PKGQ Sbjct: 66 ISIIRGTPMLVQICIVFYGLPAIGIFIDPIPAAIIGFSLNIGAYGSETIRAAISSVPKGQ 125 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A Y IG+T QT R II PQ + PLS+ FI + K TS+AS +T+ E+F+ AQ++ Sbjct: 126 WEAGYTIGMTYMQTFRRIIAPQAFRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQV 185 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + +Y L +Y E +Y ++IQ ++E Sbjct: 186 ANMSYDFLPVYIEAGLIYWCFCWVLFLIQARLE 218 >gi|301155428|emb|CBW14894.1| predicted transporter subunit: membrane component of ABC superfamily [Haemophilus parainfluenzae T3T1] Length = 238 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 91/227 (40%), Positives = 141/227 (62%), Gaps = 10/227 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M E + +I SF ++ AI+ T+P+A ISF L I +AVI +++ I+ Sbjct: 14 MTAERADYVISSFWPMMEGAILYTIPLAVISFFCGLFIAVIVAVICTLPHPNLMTKILQG 73 Query: 61 ----YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 Y+ I RGTP+LVQ+F+IFYGLP +GI + F II+ ++N AY +E +R+SI++ Sbjct: 74 ICRTYISIIRGTPMLVQIFIIFYGLPEVGIKLEPFPTAIIAFSINIGAYAAETVRASILA 133 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQW+ASYAIG+ Q I+PQ + S LS+ FIS +K TS+AS + I E+F+ Sbjct: 134 IPKGQWEASYAIGMNYTQAFVRTIMPQALRISVPSLSNTFISTVKDTSLASLVWIAELFR 193 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYII---QIKIESSVTQH 220 AQ I + Y+ ++IY E A +Y + FC+++ Q ++E +++H Sbjct: 194 VAQNITAENYEFILIYSEAALIYWV---FCFVLSMGQTRLEKRLSRH 237 >gi|194288894|ref|YP_002004801.1| amino acid ABC transporter [Cupriavidus taiwanensis LMG 19424] gi|193222729|emb|CAQ68732.1| putative amino acid ABC transporter, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 219 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 85/213 (39%), Positives = 139/213 (65%), Gaps = 2/213 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 L+IDS P LL ++ T+ A S V L++G +A++ I S ++ + YV I Sbjct: 4 LQLVIDSLPVLLQGTLL-TIKFALWSMVFGLMLGTVVALMGISHSR-VLKAVARGYVSIM 61 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQ+FV++YGLP IGI + A +++L+LN AY+SE +R +I+ + +GQW A+ Sbjct: 62 RGTPLLVQIFVVYYGLPGIGIALEPTPAGVLTLSLNVGAYLSESMRGAILGVARGQWLAA 121 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y++GLT Q +R++I PQ + + LS+ IS++K TS+ S IT+ E+ +TAQ +++ T Sbjct: 122 YSLGLTPAQALRYVIGPQALRLAVPSLSNSLISLIKDTSLVSVITVTELLRTAQEVIAAT 181 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 YQPL +Y +A +Y +L++ +Q K+E ++ Sbjct: 182 YQPLPLYLAVAAIYWVLSTALSGLQHKLERRLS 214 >gi|170758854|ref|YP_001786802.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A3 str. Loch Maree] gi|169405843|gb|ACA54254.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A3 str. Loch Maree] Length = 219 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 87/198 (43%), Positives = 133/198 (67%), Gaps = 1/198 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I + P LL A +V T+ I +SF++++ + F + ++R + I+ LI++ YV IF Sbjct: 5 FDIIFRNLPFLLKATLV-TIKITLLSFIVAITLAFIVGILRTYKFSKILDLILNAYVEIF 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG+PLL+QLF I+YGLP +GI D+ VA +I L LN +AY+SEIIR++IISI +GQ +A Sbjct: 64 RGSPLLIQLFFIYYGLPSVGIAMDAEVAAVIGLALNGAAYMSEIIRAAIISIDRGQEEAG 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +++G TR Q + +IILPQ + S PL + F S+LK TS+ S I+I E+ ++ I S T Sbjct: 124 FSLGYTRLQNLYYIILPQAVKISVPPLVNGFSSLLKDTSLVSVISITELTRSGNLIYSRT 183 Query: 186 YQPLIIYCELAFVYLILT 203 +P +Y L Y +LT Sbjct: 184 ARPFEVYLTLGLFYFVLT 201 >gi|70733753|ref|YP_257393.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68348052|gb|AAY95658.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 221 Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 78/169 (46%), Positives = 115/169 (68%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 ++S I YV FRGTPLLVQLFVI+YGLP +G+ D A +I +LN +AY EI+R Sbjct: 49 ALVSWIARIYVSFFRGTPLLVQLFVIYYGLPQLGLELDPLPAALIGFSLNMAAYACEILR 108 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++I SI +GQW+A+ +IG+TR QT+R ILPQ + T+ PL + FIS++K T++A+TI + Sbjct: 109 AAIGSIERGQWEAAASIGMTRAQTLRRAILPQAMRTALPPLGNSFISLVKDTALAATIQV 168 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 PE+F+ AQ I + T++ +Y A +Y IL S +Q ++E V +H Sbjct: 169 PELFRQAQLITARTFEIFTMYLAAALIYWILASVLAHLQNRLEERVNRH 217 >gi|156933487|ref|YP_001437403.1| hypothetical protein ESA_01305 [Cronobacter sakazakii ATCC BAA-894] gi|156531741|gb|ABU76567.1| hypothetical protein ESA_01305 [Cronobacter sakazakii ATCC BAA-894] Length = 222 Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 90/219 (41%), Positives = 137/219 (62%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFY 61 E L+IDS P LL A V TL ++ L++GF +A++R+ F+ +S + FY Sbjct: 3 ESIQLVIDSAPFLLKGA-VFTLQLSIGGMFFGLVLGFLLAMMRLSPFWP---VSWLARFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I SI KGQ Sbjct: 59 ISIFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISSIDKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R ILPQ + PL + FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQTLRRAILPQAARVALPPLGNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y ++ + +Q E+ + + Sbjct: 179 TSRTLEVFTMYLAASLIYWVMATVLSALQNHFENQLNRQ 217 >gi|148379388|ref|YP_001253929.1| amino acid ABC transporter permease [Clostridium botulinum A str. ATCC 3502] gi|153931051|ref|YP_001383764.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A str. ATCC 19397] gi|153935865|ref|YP_001387314.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A str. Hall] gi|148288872|emb|CAL82956.1| putative ABC transporter, permease protein [Clostridium botulinum A str. ATCC 3502] gi|152927095|gb|ABS32595.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A str. ATCC 19397] gi|152931779|gb|ABS37278.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A str. Hall] gi|322805728|emb|CBZ03293.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium botulinum H04402 065] Length = 219 Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 90/206 (43%), Positives = 137/206 (66%), Gaps = 4/206 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I + P LL A +V T+ I +SF++++ + F + ++R + I+ LI++ YV IF Sbjct: 5 FDIIFRNLPFLLKATLV-TIKITLLSFIVAITLAFIVGILRTYKFSKILDLILNAYVEIF 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG+PLL+QLF I+YGLP +GI D+ VA +I L LN +AY+SEIIR++IISI +GQ +A Sbjct: 64 RGSPLLIQLFFIYYGLPSVGIAMDAEVAAVIGLALNGAAYMSEIIRAAIISIDRGQEEAG 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +++G TR Q + +IILPQ + S PL + F S+LK TS+ S I+I E+ ++ I S T Sbjct: 124 FSLGYTRFQNLYYIILPQAVKISVPPLVNGFSSLLKDTSLVSVISITELTRSGNLIYSRT 183 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQI 211 +P +Y L Y +LT YI+ I Sbjct: 184 AKPFEVYLTLGLFYFVLT---YIVSI 206 >gi|146312151|ref|YP_001177225.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter sp. 638] gi|145319027|gb|ABP61174.1| L-cystine ABC transporter membrane protein / Diaminopimelate ABC transporter membrane protein [Enterobacter sp. 638] Length = 222 Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 89/218 (40%), Positives = 137/218 (62%), Gaps = 4/218 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMHFYV 62 E L+IDS P LL A V TL ++ L++GF +A++R+ S + + + FY+ Sbjct: 3 ESIQLVIDSLPYLLKGA-VFTLQLSLGGMFFGLVLGFILALMRM--SPVLPVRWLARFYI 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +FRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I SI KGQW Sbjct: 60 SVFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISSIDKGQW 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 120 EAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLIT 179 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y ++ + +Q E+ + + Sbjct: 180 SRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQ 217 >gi|260598413|ref|YP_003210984.1| amino acid ABC transporter permease [Cronobacter turicensis z3032] gi|260217590|emb|CBA31845.1| Inner membrane amino-acid ABC transporter permease protein yecS [Cronobacter turicensis z3032] Length = 231 Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 89/219 (40%), Positives = 137/219 (62%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFY 61 E L+IDS P LL A V TL ++ L++GF +A++R+ F+ +S + FY Sbjct: 12 ESIQLVIDSAPFLLKGA-VFTLQLSIGGMFFGLVLGFLLAMMRLSPFWP---VSWLARFY 67 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + +FRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I SI KGQ Sbjct: 68 ISVFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISSIDKGQ 127 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R ILPQ + PL + FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 128 WEAAASIGMTPWQTLRRAILPQAARVALPPLGNSFISLVKDTSLAATIQVPELFRQAQLI 187 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y ++ + +Q E+ + + Sbjct: 188 TSRTLEVFTMYLAASLIYWVMATVLSALQNHFENQLNRQ 226 >gi|325576597|ref|ZP_08147315.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus parainfluenzae ATCC 33392] gi|325161160|gb|EGC73275.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus parainfluenzae ATCC 33392] Length = 238 Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 91/227 (40%), Positives = 141/227 (62%), Gaps = 10/227 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M E + +I SF ++ AI+ T+P+A ISF L I +AVI +++ I+ Sbjct: 14 MTAERADYVISSFWPMMEGAILYTIPLAVISFFCGLFIAVIVAVICTLPHPNLMTKILQG 73 Query: 61 ----YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 Y+ I RGTP+LVQ+F+IFYGLP +GI + F II+ ++N AY +E +R+SI++ Sbjct: 74 ICRTYISIIRGTPMLVQIFIIFYGLPEVGIKLEPFPTAIIAFSINIGAYAAETVRASILA 133 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQW+ASYAIG+ Q I+PQ + S LS+ FIS +K TS+AS + I E+F+ Sbjct: 134 IPKGQWEASYAIGMNYTQAFVRTIMPQALHISVPSLSNTFISTVKDTSLASLVWIAELFR 193 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYII---QIKIESSVTQH 220 AQ I + Y+ ++IY E A +Y + FC+++ Q ++E +++H Sbjct: 194 VAQNITAENYEFILIYSEAALIYWV---FCFVLSIGQTRLEKRLSRH 237 >gi|168180087|ref|ZP_02614751.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum NCTC 2916] gi|182668974|gb|EDT80950.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum NCTC 2916] Length = 219 Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 89/206 (43%), Positives = 137/206 (66%), Gaps = 4/206 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I + P LL A +V T+ I +SF++++ + F + ++R + I+ LI++ Y+ IF Sbjct: 5 FDIIFRNLPFLLKATLV-TIKITLLSFIVAITLAFIVGILRTYKFSKILDLILNAYLEIF 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG+PLL+QLF I+YGLP +GI D+ VA +I L LN +AY+SEIIR++IISI +GQ +A Sbjct: 64 RGSPLLIQLFFIYYGLPSVGIAMDAEVAAVIGLALNGAAYMSEIIRAAIISIDRGQEEAG 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +++G TR Q + +IILPQ + S PL + F S+LK TS+ S I+I E+ ++ I S T Sbjct: 124 FSLGYTRFQNLHYIILPQAVKISVPPLVNGFSSLLKDTSLVSVISITELTRSGNLIYSRT 183 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQI 211 +P +Y L Y +LT YI+ I Sbjct: 184 AKPFEVYLTLGLFYFVLT---YIVSI 206 >gi|77456471|ref|YP_345976.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77380474|gb|ABA71987.1| Diaminopimelate ABC transporter membrane protein / L-cystine ABC transporter membrane protein [Pseudomonas fluorescens Pf0-1] Length = 221 Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 92/217 (42%), Positives = 139/217 (64%), Gaps = 2/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E F L +DS P LL A T+ ++ L++GF +A++R+ ++ S + YV Sbjct: 3 EAFQLALDSAPFLLKGA-YYTVILSLGGMFFGLLLGFGLALMRLSRFKSV-SWLARIYVS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTPLLVQLFVI+YGLP +G+ D A +I +LN +AY EI+R++I SI +GQW+ Sbjct: 61 FFRGTPLLVQLFVIYYGLPQLGMELDPLPAALIGFSLNMAAYACEILRAAIGSIERGQWE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+TR QT+R ILPQ + T+ PL + FIS++K T++A+TI +PE+F+ AQ I + Sbjct: 121 AAASIGMTRAQTLRRAILPQAMRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLITA 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T++ +Y A +Y IL + Q K+E V +H Sbjct: 181 RTFEVFTMYLAAALIYWILATVLSHFQNKLEERVNRH 217 >gi|323489287|ref|ZP_08094519.1| amino acid ABC transporter (permease) [Planococcus donghaensis MPA1U2] gi|323397174|gb|EGA89988.1| amino acid ABC transporter (permease) [Planococcus donghaensis MPA1U2] Length = 236 Score = 168 bits (425), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 91/210 (43%), Positives = 140/210 (66%), Gaps = 1/210 (0%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 SF L+ A + TLP++ ISF++ L + A+ RI + I +I YV I RGTPL Sbjct: 25 SSFLPLIEATLQFTLPLSIISFILGLALAVLTALARIS-TVKIFQIIARVYVSIIRGTPL 83 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LVQLF++FYGLP +GI D F A +I +LN AY SE+IR++I+SIPKGQW+A+ IG+ Sbjct: 84 LVQLFILFYGLPTLGITIDPFPAAVIGFSLNVGAYASEVIRAAILSIPKGQWEAAGTIGM 143 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + Q++R +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ+I +T Y+ L+ Sbjct: 144 SYTQSLRRVILPQASRVSLPPLSNTFISLVKDTSLASLILVTEMFRVAQQIAATNYEFLL 203 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +Y + A +Y ++ ++Q ++E+ ++ Sbjct: 204 LYGQAALLYWVICFALSLVQGRLENRFDRY 233 >gi|226360988|ref|YP_002778766.1| cystine ABC transporter permease protein [Rhodococcus opacus B4] gi|226239473|dbj|BAH49821.1| cystine ABC transporter permease protein [Rhodococcus opacus B4] Length = 222 Score = 167 bits (424), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 85/214 (39%), Positives = 136/214 (63%), Gaps = 1/214 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 LI+D+ +L A I +T+P+ ISF I L+I +A+ RI S +S++ FYV I R Sbjct: 7 QLILDNLWPMLKATITMTIPLTIISFTIGLVIALLVALARIS-SIRPLSVLARFYVSIIR 65 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQLF++FY LP G+ + F A +I+ +LN Y +E+IR++I+SIPKGQW+A+ Sbjct: 66 GTPLLVQLFIVFYALPQFGVTLEPFPAAVIAFSLNVGGYAAEVIRAAILSIPKGQWEAAQ 125 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 IG+ T++ I+LPQ + PLS+ IS++K TS+ASTI + E+ + AQ + T+ Sbjct: 126 TIGMGYTTTLQRIVLPQATRVAVPPLSNTLISLVKDTSLASTILVTELLRVAQLAAAPTF 185 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +Y A Y ++ F +Q+++E+ + ++ Sbjct: 186 DFFALYGVAALYYWVICIFLSAVQVRLEARLDRY 219 >gi|157145290|ref|YP_001452609.1| hypothetical protein CKO_01027 [Citrobacter koseri ATCC BAA-895] gi|157082495|gb|ABV12173.1| hypothetical protein CKO_01027 [Citrobacter koseri ATCC BAA-895] Length = 222 Score = 167 bits (424), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 90/218 (41%), Positives = 136/218 (62%), Gaps = 4/218 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMHFYV 62 E L+IDS P LL A V TL ++ L++GF +A++R+ S + + + FY+ Sbjct: 3 ESIQLVIDSLPYLLKGA-VFTLQLSIGGMFFGLLLGFILALMRM--SPLLPVRWLARFYI 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I SI KGQW Sbjct: 60 SIFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISSIDKGQW 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 120 EAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLIT 179 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y ++ + +Q E + + Sbjct: 180 SRTLEVFTMYLAASLIYWVMATVLSALQNYFEEQLNRQ 217 >gi|261340316|ref|ZP_05968174.1| L-cystine ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] gi|288317407|gb|EFC56345.1| L-cystine ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] Length = 222 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 90/218 (41%), Positives = 137/218 (62%), Gaps = 4/218 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMHFYV 62 E L+IDS P LL A V TL ++ L++GF +A++R+ S + I + FY+ Sbjct: 3 ESIQLVIDSLPFLLKGA-VFTLQLSIGGMFFGLVLGFVLALMRM--SHVLPIRWLARFYI 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +FRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I SI KGQW Sbjct: 60 SVFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISSIDKGQW 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 120 EAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLIT 179 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y ++ + +Q E+ + + Sbjct: 180 SRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQ 217 >gi|307246527|ref|ZP_07528599.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306852590|gb|EFM84823.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 238 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 88/223 (39%), Positives = 136/223 (60%), Gaps = 4/223 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS----L 56 M L++D+F ++ AA++V++P+A SF+I + I +A+IR+ + ++ Sbjct: 12 MDEARVKLVMDAFFPMVEAAVLVSIPLAIASFIIGMAIAVGVALIRVTPVNGMLHRIALA 71 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I+ Y+ I RGTP+LVQ+ V+FYGLP IG+ D A II +LN AY SE +R++I S Sbjct: 72 IVKVYISIIRGTPMLVQISVVFYGLPAIGVYIDPIPAAIIGFSLNIGAYGSETVRAAISS 131 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +PKGQW+A Y I +T QT R II PQ I PLS+ FI + K TS+AS +T+ E+F+ Sbjct: 132 VPKGQWEAGYTICMTYMQTFRRIIAPQAIRVVIPPLSNTFIGLFKDTSLASVVTVTEMFR 191 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 AQ++ + +Y L +Y E +Y ++IQ K+E + Sbjct: 192 VAQQMANMSYDFLPVYIEAGLIYWCFCWVLFLIQAKLERRFNR 234 >gi|52784239|ref|YP_090068.1| YckJ [Bacillus licheniformis ATCC 14580] gi|163119223|ref|YP_077658.2| ABC transporter permease YckJ [Bacillus licheniformis ATCC 14580] gi|319648833|ref|ZP_08003044.1| YckJ protein [Bacillus sp. BT1B_CT2] gi|52346741|gb|AAU39375.1| YckJ [Bacillus licheniformis ATCC 14580] gi|145902729|gb|AAU22020.2| ABC transporter permease protein YckJ [Bacillus licheniformis ATCC 14580] gi|317389252|gb|EFV70068.1| YckJ protein [Bacillus sp. BT1B_CT2] Length = 234 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 92/216 (42%), Positives = 139/216 (64%), Gaps = 2/216 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++L+ +SF + I ++P+A +SF+ +II A+ R+ S I+ + YV Sbjct: 17 WDLVRESFWPIFLRGIYYSIPLAILSFIFGMIIALITALARMSKS-RILRAVFGIYVSAI 75 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+IFY P + D F + II+ +LN AY SEIIR+SI+S+PKGQW+A+ Sbjct: 76 RGTPLLVQLFIIFYLFPAFQVTIDPFPSAIIAFSLNVGAYASEIIRASILSVPKGQWEAA 135 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y+IG+T+K + +ILPQ + S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 136 YSIGMTQKTALTRVILPQAVRVSIPPLSNTFISLVKDTSLASQILVAELFRKAQEIGAGN 195 Query: 186 Y-QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Q LIIY E AF+Y I+ ++Q +IE + ++ Sbjct: 196 LDQILIIYMEAAFIYWIICFVLALVQQQIERRLDRY 231 >gi|167855090|ref|ZP_02477863.1| polar amino acid ABC transporter, inner membrane subunit [Haemophilus parasuis 29755] gi|167853828|gb|EDS25069.1| polar amino acid ABC transporter, inner membrane subunit [Haemophilus parasuis 29755] Length = 238 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 86/218 (39%), Positives = 135/218 (61%), Gaps = 4/218 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF-FSDTIISLIMHF---YV 62 L+I+ F ++ AA +V++P+A SF+I + I +A++R+ + L++ F Y+ Sbjct: 18 ELVINGFWPMVQAAFLVSIPLAIASFIIGMAIAVGVALVRVTPVNGPFHRLLLWFVKGYI 77 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I RGTP+LVQ+ ++FYGLP IGI D A II ++N AY SE IR++I+S+PKGQW Sbjct: 78 SIIRGTPMLVQICIVFYGLPAIGIFIDPIPAAIIGFSINIGAYGSETIRAAILSVPKGQW 137 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A Y IG+T QT R II PQ + PLS+ FI + K TS+AS +T+ E+F+ AQ++ Sbjct: 138 EAGYTIGMTYMQTFRRIIAPQAFRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQVA 197 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + +Y L +Y E +Y + IQ ++E ++ Sbjct: 198 NMSYDFLPVYIEAGLIYWCFCWVLFFIQARLEKRFDRY 235 >gi|226948691|ref|YP_002803782.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A2 str. Kyoto] gi|226844167|gb|ACO86833.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A2 str. Kyoto] Length = 219 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 89/206 (43%), Positives = 136/206 (66%), Gaps = 4/206 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I + P LL A +V T+ I +SF++++ + + ++R + I+ LI++ YV IF Sbjct: 5 FDIIFRNLPFLLKATLV-TIKITLLSFIVAITLAVIVGILRTYKFSKILDLILNAYVEIF 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG+PLL+QLF I+YGLP +GI D+ VA +I L LN +AY+SEIIR++IISI +GQ +A Sbjct: 64 RGSPLLIQLFFIYYGLPSVGIAMDAEVAAVIGLALNGAAYMSEIIRAAIISIDRGQEEAG 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +++G TR Q + +IILPQ + S PL + F S+LK TS+ S I+I E+ ++ I S T Sbjct: 124 FSLGYTRFQNLHYIILPQAVKISVPPLVNGFSSLLKDTSLVSVISITELTRSGNLIYSRT 183 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQI 211 +P +Y L Y +LT YI+ I Sbjct: 184 AKPFEVYLTLGLFYFVLT---YIVSI 206 >gi|283785663|ref|YP_003365528.1| cystine ABC transporter permease [Citrobacter rodentium ICC168] gi|282949117|emb|CBG88724.1| putative cystine ABC transporter, permease protein [Citrobacter rodentium ICC168] Length = 222 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 89/219 (40%), Positives = 137/219 (62%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFY 61 E L+IDS P LL A V TL ++ L++GF +A++R+ ++ L + FY Sbjct: 3 ESIQLVIDSLPYLLKGA-VFTLQLSIGGMFFGLLLGFVLALMRL---SPLLPLRWLARFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY +E +R++I SI KGQ Sbjct: 59 ISIFRGTPLIAQLFMIYYGLPQFGIELDPVPAAMIGLSLNTAAYAAETLRAAISSIDKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y ++ + +Q E+ + + Sbjct: 179 TSRTLEVFTMYLAASLIYWVMATVLSSLQNYFENQLNRQ 217 >gi|295095485|emb|CBK84575.1| L-cystine ABC transporter membrane protein/Diaminopimelate ABC transporter membrane protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 222 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 89/219 (40%), Positives = 136/219 (62%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFY 61 E L+IDS P LL A V TL ++ L++GF +A++R+ I + + FY Sbjct: 3 ESIQLVIDSLPFLLKGA-VFTLQLSIGGMFFGLVLGFVLALMRM---SNIWPVRWLARFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + +FRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I SI KGQ Sbjct: 59 ISVFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISSIDKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y ++ + +Q E+ + + Sbjct: 179 TSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQ 217 >gi|73537419|ref|YP_297786.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134] gi|72120756|gb|AAZ62942.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134] Length = 223 Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 84/213 (39%), Positives = 142/213 (66%), Gaps = 2/213 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LII + P LL A +T+ A S + L++G +A++ I S ++S I YV + Sbjct: 8 FDLIIHASPVLLQGA-AITVKFALASMIFGLLVGIVVAIMGISASP-VLSGIARAYVSVM 65 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQ+FV++YGLP +GI + A I++LT N AY+SE +R +I+ I +GQW A+ Sbjct: 66 RGTPLLVQMFVVYYGLPDLGINLEPTTAGILTLTANAGAYLSESMRGAILGISRGQWSAA 125 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +++GL+ QT+R+I+ PQ + + L + IS++K TS+ S IT+ E+ +++Q I+++T Sbjct: 126 HSLGLSHLQTLRYIVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSSQEIIAST 185 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 +QPL +Y +A +Y +L++ +Q +IE+ +T Sbjct: 186 FQPLPLYLSVAAIYWLLSTGLSWVQRRIEARLT 218 >gi|217033979|ref|ZP_03439402.1| hypothetical protein HP9810_883g49 [Helicobacter pylori 98-10] gi|216943612|gb|EEC23060.1| hypothetical protein HP9810_883g49 [Helicobacter pylori 98-10] Length = 237 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 89/220 (40%), Positives = 139/220 (63%), Gaps = 6/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIIS 55 + E L++++F +L AA ++LP+A ISF++ L I F+A+I+I F T+++ Sbjct: 16 LSKERLELLLEAFYPMLKAAFCISLPLAIISFILGLFIAVFVALIKIAPPKHFIHKTLLA 75 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + +FYV + RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S + Sbjct: 76 GV-NFYVSLIRGTPLLVQIVVVFYGLPALGVYIDPIPAGIIAFSFNVGAYASETLRASFL 134 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+PK QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI E+F Sbjct: 135 SVPKDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVF 194 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + AQ+ + +Y L IY E A +Y + +IQ ++E Sbjct: 195 RIAQQKANASYDFLPIYLEAALIYWLFCLVLEVIQKRVEK 234 >gi|153939214|ref|YP_001390775.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum F str. Langeland] gi|170756000|ref|YP_001781066.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum B1 str. Okra] gi|152935110|gb|ABS40608.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum F str. Langeland] gi|169121212|gb|ACA45048.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum B1 str. Okra] gi|295318847|gb|ADF99224.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum F str. 230613] Length = 219 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 90/206 (43%), Positives = 136/206 (66%), Gaps = 4/206 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I + P LL A +V T+ I +SF++++ + F + ++R + I+ LI++ YV IF Sbjct: 5 FDIIFRNLPFLLKATLV-TIKITLLSFIVAITLAFIVGILRTYKFSKILDLILNAYVEIF 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG+PLL+QLF I+YGLP +GI D+ VA +I L LN +AY+SEIIR++IISI +GQ +A Sbjct: 64 RGSPLLIQLFFIYYGLPSVGIAMDAEVAAVIGLALNGAAYMSEIIRAAIISIDRGQEEAG 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +++G TR Q + +IILPQ S PL + F S+LK TS+ S I+I E+ ++ I S T Sbjct: 124 FSLGYTRLQNLCYIILPQAAQISVPPLVNGFSSLLKDTSLISVISITELTRSGNLIYSRT 183 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQI 211 +P +Y L Y +LT YI+ I Sbjct: 184 ARPFEVYLTLGLFYFVLT---YIVSI 206 >gi|295689320|ref|YP_003593013.1| polar amino acid ABC transporter inner membrane subunit [Caulobacter segnis ATCC 21756] gi|295431223|gb|ADG10395.1| polar amino acid ABC transporter, inner membrane subunit [Caulobacter segnis ATCC 21756] Length = 219 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 84/215 (39%), Positives = 135/215 (62%), Gaps = 2/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +L+ S P LL A L ++ I + +++GF +A++R+ + ++ YV F Sbjct: 5 LDLLRQSAPLLLKGAGYTVL-LSVIGMGVGVVLGFGLALMRLSRTP-LLRWPAGVYVSAF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+I+YGLP GI + VA I +LN +AY EI+RS+I ++ KGQW+A+ Sbjct: 63 RGTPLLVQLFLIYYGLPQFGIEMPALVAAGIGFSLNVAAYACEILRSAIAAVDKGQWEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +G++R QT+R +ILPQ T+ PLS+ FIS++K TS+A+TI +PE+F+ Q I + T Sbjct: 123 TVLGMSRGQTLRRVILPQAARTAVAPLSNSFISLVKDTSLAATIQVPELFRQTQLITART 182 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y+ +Y A +Y I+++ Q ++E ++ Sbjct: 183 YEIFTMYLAAAAIYWIVSTVLAAGQHRLERRASEG 217 >gi|282902328|ref|ZP_06310221.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus C160] gi|282596787|gb|EFC01746.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus C160] Length = 239 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 95/211 (45%), Positives = 135/211 (63%), Gaps = 14/211 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++FV+ LII F A++RI S + S I YV I RGTP+ Sbjct: 18 QAFGPMLEGLVKYSIPITLVTFVLGLIIALFTALMRISTSKVLRS-IARVYVSIIRGTPM 76 Query: 71 LVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G + + VA II L+LN AY SEIIR IISIPKG Sbjct: 77 IVQLFIIFYGIPELGRLLTNDADNQWTLAPVVAAIIGLSLNVGAYASEIIRGGIISIPKG 136 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+T +QTI+ IILPQ I S L + F+S++K TS+ I + E+F+ AQ Sbjct: 137 QTEAAYSIGMTYRQTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQE 196 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 +VSTTY+ L IY +A +Y ++ C+II I Sbjct: 197 VVSTTYEYLTIYVLVALMYWVV---CFIISI 224 >gi|120406518|ref|YP_956347.1| polar amino acid ABC transporter inner membrane subunit [Mycobacterium vanbaalenii PYR-1] gi|119959336|gb|ABM16341.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Mycobacterium vanbaalenii PYR-1] Length = 503 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 86/215 (40%), Positives = 134/215 (62%), Gaps = 1/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 L++D+ L AA+ +T+P+ ISFVI L+I +A+ R+ S+ +++ + FY+ + Sbjct: 287 LRLVLDNLWPLARAALTMTIPLTIISFVIGLVIALGVALARLS-SNVVLTNLARFYISVI 345 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF++F+ LP G+ D F A +I+ +LN Y +EIIRS+I SIPKGQW+A+ Sbjct: 346 RGTPLLVQLFIVFFALPEFGVRIDPFPAAVIAFSLNVGGYAAEIIRSAIQSIPKGQWEAA 405 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 IGL T+R IILPQ + PLS+ IS++K TS+ASTI + E+ + AQ I + T Sbjct: 406 ETIGLNYAGTLRRIILPQATRVAVPPLSNTLISLVKDTSLASTILVTELLRQAQIIAAPT 465 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ +Y A Y ++ Q + E + ++ Sbjct: 466 FEFFALYGTAAVYYWVICLVLSFGQARFERRLERY 500 >gi|296101734|ref|YP_003611880.1| cystine transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056193|gb|ADF60931.1| cystine transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 222 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 88/217 (40%), Positives = 135/217 (62%), Gaps = 2/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E L+IDS P LL A V TL ++ L++GF +A++R+ + + FY+ Sbjct: 3 ESIQLVIDSLPFLLKGA-VFTLQLSIGGMFFGLVLGFVLALMRMS-PVWPVRWLARFYIS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 +FRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I SI KGQW+ Sbjct: 61 VFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISSIDKGQWE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I S Sbjct: 121 AAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T + +Y + +Y ++ + +Q E+ + + Sbjct: 181 RTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQ 217 >gi|168184265|ref|ZP_02618929.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Bf] gi|237794766|ref|YP_002862318.1| amino acid ABC transporter permease [Clostridium botulinum Ba4 str. 657] gi|182672656|gb|EDT84617.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Bf] gi|229264093|gb|ACQ55126.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Ba4 str. 657] Length = 219 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 85/198 (42%), Positives = 133/198 (67%), Gaps = 1/198 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+++ + P LL A +V T+ I +SF++++ + F + ++R + I+ LI++ YV IF Sbjct: 5 FDIVFRNLPFLLKATLV-TIKITLLSFIVAITLAFIVGILRTYKFSKILDLILNAYVEIF 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG+PLL+QLF I+YGLP +GI ++ VA +I L LN +AY+SEIIR++IISI +GQ +A Sbjct: 64 RGSPLLIQLFFIYYGLPSVGIAMNAEVAAVIGLALNGAAYMSEIIRAAIISIDRGQEEAG 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +++G TR Q + +IILPQ + S PL + F S+LK TS+ S I+I E+ ++ I S T Sbjct: 124 FSLGYTRLQNLCYIILPQAVKISVPPLVNGFSSLLKDTSLVSVISITELTRSGNLIYSRT 183 Query: 186 YQPLIIYCELAFVYLILT 203 +P +Y L Y +LT Sbjct: 184 ARPFEVYLTLGLFYFVLT 201 >gi|168462510|ref|ZP_02696441.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195633964|gb|EDX52316.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 222 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 87/217 (40%), Positives = 136/217 (62%), Gaps = 2/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E L+I+S P LL A V TL ++ L++GF +A++R+ ++ + FY+ Sbjct: 3 ESIQLVIESLPYLLKGA-VFTLQLSIGGMFFGLLLGFVLALMRMS-PLWLVRWLARFYIS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I +I KGQW+ Sbjct: 61 IFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISAIDKGQWE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I S Sbjct: 121 AAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T + +Y + +Y ++ + +Q E+ + + Sbjct: 181 RTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQ 217 >gi|161613487|ref|YP_001587452.1| hypothetical protein SPAB_01204 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168234122|ref|ZP_02659180.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168244799|ref|ZP_02669731.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168259764|ref|ZP_02681737.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194450867|ref|YP_002046003.1| L-cystine transport system permease TcyB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469992|ref|ZP_03075976.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197265602|ref|ZP_03165676.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205352353|ref|YP_002226154.1| ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856534|ref|YP_002243185.1| ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|161362851|gb|ABX66619.1| hypothetical protein SPAB_01204 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194409171|gb|ACF69390.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456356|gb|EDX45195.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197243857|gb|EDY26477.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205272134|emb|CAR36987.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205331848|gb|EDZ18612.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336344|gb|EDZ23108.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205351153|gb|EDZ37784.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708337|emb|CAR32640.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326627403|gb|EGE33746.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 222 Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 87/217 (40%), Positives = 136/217 (62%), Gaps = 2/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E L+I+S P LL A V TL ++ L++GF +A++R+ ++ + FY+ Sbjct: 3 ESIQLVIESLPYLLKGA-VFTLQLSIGGMFFGLLLGFVLALMRMS-PLWLVRWLARFYIS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I +I KGQW+ Sbjct: 61 IFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISAIDKGQWE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I S Sbjct: 121 AAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T + +Y + +Y ++ + +Q E+ + + Sbjct: 181 RTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQ 217 >gi|118470254|ref|YP_890525.1| glutamine-binding periplasmic protein/glutamine transporter permease [Mycobacterium smegmatis str. MC2 155] gi|118171541|gb|ABK72437.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Mycobacterium smegmatis str. MC2 155] Length = 475 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 86/215 (40%), Positives = 135/215 (62%), Gaps = 1/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + LI D+ L AA+ +T+P+ ISF I L+I +A+ R+ S+ ++S + Y+ I Sbjct: 259 WQLIGDNLWPLAKAAVTMTIPLTIISFAIGLVIALGVALARLS-SNAVLSNVARLYISII 317 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF++FY LP G+ D F A +I+ +LN Y +EIIR++I+SIPKGQW+A+ Sbjct: 318 RGTPLLVQLFLVFYALPEFGVRIDPFPAAVIAFSLNVGGYAAEIIRAAILSIPKGQWEAA 377 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 IGLT ++++ IILPQ + PLS+ IS++K TS+ASTI + E+ + AQ + T Sbjct: 378 ETIGLTYGKSLQRIILPQAARVAVPPLSNTLISLVKDTSLASTILVTELLRQAQIAAAPT 437 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ +Y A Y ++ Q +IE + ++ Sbjct: 438 FEFFALYGTAAVYYWVICLVLSFGQSRIERRLERY 472 >gi|15645555|ref|NP_207731.1| amino acid ABC transporter, permease protein (yckJ) [Helicobacter pylori 26695] gi|2314077|gb|AAD07984.1| amino acid ABC transporter, permease protein (yckJ) [Helicobacter pylori 26695] Length = 237 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 89/220 (40%), Positives = 138/220 (62%), Gaps = 6/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIIS 55 + E L++++F +L AA ++LP+A ISF++ L I F+A+I+I F +++ Sbjct: 16 LSKERLELLLEAFYPMLKAAFCISLPLAIISFILGLCIAVFVALIKIAPPKHFIHKALLA 75 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + +FYV I RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S + Sbjct: 76 GV-NFYVSIIRGTPLLVQIVVVFYGLPALGVYMDPIPAGIIAFSFNVGAYASETLRASFL 134 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+PK QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI E+F Sbjct: 135 SVPKDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVF 194 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + AQ+ + +Y L IY E A +Y + +IQ ++E Sbjct: 195 RIAQQKANASYDFLPIYLEAALIYWLFCLVLEVIQKRVEK 234 >gi|145221824|ref|YP_001132502.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium gilvum PYR-GCK] gi|145214310|gb|ABP43714.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Mycobacterium gilvum PYR-GCK] Length = 503 Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 87/215 (40%), Positives = 134/215 (62%), Gaps = 1/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 L++D+ L AA+ +T+P+ ISFVI L+I +A+ R+ S+ ++S + FY+ + Sbjct: 287 LQLVLDNLWPLAKAALTMTIPLTIISFVIGLVIALGVALARLS-SNVVLSNLARFYISVI 345 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF++F+ LP G+ D F A +I+ +LN Y +EIIRS+I SIPKGQW+A+ Sbjct: 346 RGTPLLVQLFIVFFALPEFGVKIDPFPAAVIAFSLNVGGYAAEIIRSAIQSIPKGQWEAA 405 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 IGL T+R IILPQ + PLS+ IS++K TS+ASTI + E+ + AQ I + T Sbjct: 406 ETIGLNYVGTLRRIILPQATRVAVPPLSNTLISLVKDTSLASTILVTELLRQAQIIAAPT 465 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ +Y A Y ++ Q + E + ++ Sbjct: 466 FEFFALYGTAAVYYWVICLVLSFGQARFEHRLERY 500 >gi|317012748|gb|ADU83356.1| amino acid ABC transporter permease [Helicobacter pylori Lithuania75] Length = 240 Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 88/217 (40%), Positives = 137/217 (63%), Gaps = 6/217 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIISLIM 58 E L++++F +L AA ++LP+A ISF++ L+I +A+I+I F +++ + Sbjct: 22 ERLELLLEAFYPMLKAAFCISLPLAIISFILGLLIAIMVALIKIVPPKHFMHKALLAGV- 80 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 +FYV I RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S +S+P Sbjct: 81 NFYVSIIRGTPLLVQIVVVFYGLPALGVYMDPIPAGIIAFSFNVGAYASETLRASFLSVP 140 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 K QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI E+F+ A Sbjct: 141 KDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIA 200 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q+ + +Y L IY E A +Y + +IQ ++E Sbjct: 201 QQKANASYDFLPIYLEAALIYWLFCLVLEVIQKRVEK 237 >gi|194446396|ref|YP_002041217.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194405059|gb|ACF65281.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 222 Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 87/217 (40%), Positives = 136/217 (62%), Gaps = 2/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E L+I+S P LL A V TL ++ L++GF +A++R+ + + FY+ Sbjct: 3 ESIQLVIESLPYLLKGA-VFTLQLSIGGMFFGLLLGFVLALMRMS-PLWPVRWLARFYIS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I +I KGQW+ Sbjct: 61 IFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISAIDKGQWE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+T QT+R +ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I S Sbjct: 121 AAASIGMTPWQTLRRVILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T + +Y + +Y ++ + +Q E+ + + Sbjct: 181 RTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQ 217 >gi|315446439|ref|YP_004079318.1| amino acid ABC transporter membrane protein, PAAT family ;amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] gi|315264742|gb|ADU01484.1| amino acid ABC transporter membrane protein, PAAT family ;amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] Length = 487 Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 87/215 (40%), Positives = 134/215 (62%), Gaps = 1/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 L++D+ L AA+ +T+P+ ISFVI L+I +A+ R+ S+ ++S + FY+ + Sbjct: 271 LQLVLDNLWPLAKAALTMTIPLTIISFVIGLVIALGVALARLS-SNVVLSNLARFYISVI 329 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF++F+ LP G+ D F A +I+ +LN Y +EIIRS+I SIPKGQW+A+ Sbjct: 330 RGTPLLVQLFIVFFALPEFGVKIDPFPAAVIAFSLNVGGYAAEIIRSAIQSIPKGQWEAA 389 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 IGL T+R IILPQ + PLS+ IS++K TS+ASTI + E+ + AQ I + T Sbjct: 390 ETIGLNYVGTLRRIILPQATRVAVPPLSNTLISLVKDTSLASTILVTELLRQAQIIAAPT 449 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ +Y A Y ++ Q + E + ++ Sbjct: 450 FEFFALYGTAAVYYWVICLVLSFGQARFEHRLERY 484 >gi|312958351|ref|ZP_07772872.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] gi|311287415|gb|EFQ65975.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] Length = 221 Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 75/169 (44%), Positives = 113/169 (66%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ L YV FRGTPLLVQLF+I+YGLP +GI D A +I +LN +AY EI+R Sbjct: 49 KLLRLPARVYVSFFRGTPLLVQLFLIYYGLPQVGIELDPIPAAMIGFSLNMAAYACEILR 108 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++I SI +GQW+A+ +IG+TR QT+R ILPQ + T+ PL + FIS++K T++A+TI + Sbjct: 109 AAIASIERGQWEAAASIGMTRAQTLRRAILPQAMRTALPPLGNSFISLVKDTALAATIQV 168 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 PE+F+ AQ + + T++ +Y A +Y +L S Q ++E V +H Sbjct: 169 PELFRQAQLVSARTFEIFTMYLSAALIYWVLASILAYFQNRLEDRVNRH 217 >gi|296157668|ref|ZP_06840502.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295891914|gb|EFG71698.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 219 Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 85/204 (41%), Positives = 138/204 (67%), Gaps = 5/204 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L+++S P L A V+T+ A +S + LI G +A++ + S +++ I YV + R Sbjct: 5 SLLVESLPVLAQGA-VLTVKFAVLSMIFGLIAGAVLALMGVSHSR-VLNWIARIYVSVMR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+FVI+YGLP GI D A +I+L+ N +AY+SE +R +I+ I +GQW A+Y Sbjct: 63 GTPLLVQIFVIYYGLPSFGISLDPTPAGVIALSANVAAYLSESMRGAILGIHQGQWLAAY 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+R+QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ ++AQ I+++TY Sbjct: 123 SLGLSRRQTLRYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTY 182 Query: 187 QPLIIYCELAFVYLILTSFCYIIQ 210 QPL +Y A VY +L C +++ Sbjct: 183 QPLPLYLAAAAVYWVL---CQVLE 203 >gi|91783310|ref|YP_558516.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91687264|gb|ABE30464.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] Length = 219 Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 85/204 (41%), Positives = 135/204 (66%), Gaps = 2/204 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L+++S P L A V+T+ A +S + LI G +A++ + S + + I YV + R Sbjct: 5 SLLVESLPVLAQGA-VLTIKFAVLSMIFGLIAGAVLALMGVSHSRAL-NWIARIYVSVMR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+FVI+YGLP GI D A +I+L+ N +AY+SE +R +I+ I +GQW A+Y Sbjct: 63 GTPLLVQIFVIYYGLPSFGISLDPTPAGVIALSANVAAYLSESMRGAILGIHQGQWLAAY 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+R+QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ ++AQ I+++TY Sbjct: 123 SLGLSRRQTLRYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTY 182 Query: 187 QPLIIYCELAFVYLILTSFCYIIQ 210 QPL +Y A VY +L +Q Sbjct: 183 QPLPLYLAAAAVYWVLCQMLESVQ 206 >gi|330806944|ref|YP_004351406.1| ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375052|gb|AEA66402.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 221 Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 77/168 (45%), Positives = 114/168 (67%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +++ I YV FRGTPLLVQLFVI+YGLP +GI D A +I +LN +AY EI+R+ Sbjct: 50 LVNWIARIYVSFFRGTPLLVQLFVIYYGLPQLGIELDPLPAALIGFSLNMAAYACEILRA 109 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I SI +GQW+A+ +IG+TR QT+R ILPQ T+ PL + FIS++K T++A+TI +P Sbjct: 110 AISSIERGQWEAAASIGMTRAQTLRRAILPQAARTALPPLGNSFISLVKDTALAATIQVP 169 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E+F+ AQ I + T++ +Y A +Y +L S +Q +E+ V +H Sbjct: 170 ELFRQAQLITARTFEIFTMYLAAALIYWVLASVLSHLQNVLEARVNRH 217 >gi|218548545|ref|YP_002382336.1| ABC transporter permease [Escherichia fergusonii ATCC 35469] gi|218356086|emb|CAQ88703.1| putative transporter subunit: permease component of ABC superfamily transporter [Escherichia fergusonii ATCC 35469] gi|324113636|gb|EGC07611.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia fergusonii B253] gi|325496962|gb|EGC94821.1| transporter subunit: permease component of ABC superfamily transporter [Escherichia fergusonii ECD227] Length = 222 Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 87/217 (40%), Positives = 136/217 (62%), Gaps = 2/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E +L+I+S P LL A V TL ++ L++GF +A++R+ + + FY+ Sbjct: 3 ESIDLVIESLPYLLKGA-VFTLQLSIGGMFFGLLLGFILALMRLSPVGPL-RWLARFYIS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY +E +R++I SI KGQW+ Sbjct: 61 IFRGTPLIAQLFMIYYGLPQFGIELDPVPSAMIGLSLNTAAYAAETLRAAISSIDKGQWE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I S Sbjct: 121 AAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T + +Y + +Y I+ + +Q E+ + + Sbjct: 181 RTLEVFTMYLAASLIYWIMATVLSTLQNYFENQLNRQ 217 >gi|224477394|ref|YP_002635000.1| hypothetical protein Sca_1909 [Staphylococcus carnosus subsp. carnosus TM300] gi|222422001|emb|CAL28815.1| hypothetical protein SCA_1909 [Staphylococcus carnosus subsp. carnosus TM300] Length = 235 Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 96/211 (45%), Positives = 133/211 (63%), Gaps = 14/211 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L I ++PI ++FV+ LII F A++RI S I+ I YV I RGTP+ Sbjct: 14 QAFLPMLGGLIKYSIPITLVTFVLGLIIALFTALMRISTSK-ILRGIARVYVSIIRGTPM 72 Query: 71 LVQLFVIFYGLPHIGIV----------FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYGLP +G + S VA II L+LN AY SEIIR IISIPKG Sbjct: 73 IVQLFIIFYGLPELGRLVTNNPDTQWTLPSVVAAIIGLSLNVGAYASEIIRGGIISIPKG 132 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+ +QTI+ IILPQ I S L + F+S+LK TS+ I + E+F+ AQ Sbjct: 133 QSEAAYSIGMNYRQTIQRIILPQAIRVSVPALGNTFLSLLKDTSLLGFILVAEMFRKAQE 192 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + STTY+ L IY +A +Y ++ C+II + Sbjct: 193 VASTTYEYLTIYILVALLYWVV---CFIISV 220 >gi|207092331|ref|ZP_03240118.1| amino acid ABC transporter, permease protein [Helicobacter pylori HPKX_438_AG0C1] Length = 240 Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 89/220 (40%), Positives = 138/220 (62%), Gaps = 6/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIIS 55 + E L++++F +L AA ++LP+A ISF++ L I F+A+I+I F +++ Sbjct: 19 LSKERLELLLEAFYPMLKAAFCISLPLAIISFILGLFIAVFVALIKIAPPKHFIHKALLA 78 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + +FYV + RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S + Sbjct: 79 GV-NFYVSLIRGTPLLVQIVVVFYGLPALGVYIDPIPAGIIAFSFNVGAYASETLRASFL 137 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+PK QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI EIF Sbjct: 138 SVPKDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEIF 197 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + AQ+ + +Y L IY E A +Y + +IQ ++E Sbjct: 198 RIAQQKANASYDFLPIYLEAALIYWLFCLVLEVIQKRVEK 237 >gi|308183090|ref|YP_003927217.1| amino acid ABC transporter, permease protein [Helicobacter pylori PeCan4] gi|308065275|gb|ADO07167.1| amino acid ABC transporter, permease protein [Helicobacter pylori PeCan4] Length = 240 Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 89/220 (40%), Positives = 139/220 (63%), Gaps = 6/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIIS 55 + E L++++F +L AA ++LP+A ISF++ L I F+A+I+I F T++ Sbjct: 19 LSKERLELLLEAFYPMLKAAFCISLPLAIISFILGLFIAVFVALIKIAPPKHFIHKTLL- 77 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + ++FYV + RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S + Sbjct: 78 VGVNFYVSLIRGTPLLVQIVVVFYGLPALGVYIDPIPAGIIAFSFNVGAYASETLRASFL 137 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+PK QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI E+F Sbjct: 138 SVPKDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVF 197 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + AQ+ + +Y L IY E A +Y + +IQ ++E Sbjct: 198 RIAQQKANASYDFLPIYLEAALIYWLFCLVLEVIQKRVEK 237 >gi|108801905|ref|YP_642102.1| amino acid ABC transporter permease [Mycobacterium sp. MCS] gi|119871057|ref|YP_941009.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium sp. KMS] gi|108772324|gb|ABG11046.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. MCS] gi|119697146|gb|ABL94219.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Mycobacterium sp. KMS] Length = 489 Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 84/215 (39%), Positives = 135/215 (62%), Gaps = 1/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + LI+D+ L AA+ +T+P+ ISF I L+I +A+ R+ + +++ + FY+ I Sbjct: 273 WQLILDNLWPLARAALTMTIPLTVISFAIGLVIALGVALARLS-PNVVLTNVARFYISII 331 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF++F+ LP GI D F A +I+ +LN Y +EIIRS+I+SIPKGQW+A+ Sbjct: 332 RGTPLLVQLFIVFFALPEFGIRIDPFPAAVIAFSLNVGGYAAEIIRSAILSIPKGQWEAA 391 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 IG+ ++R I+LPQ + PLS+ IS++K TS+ASTI + E+ + AQ + + T Sbjct: 392 ETIGMNYPTSLRRIVLPQAARVAVPPLSNTLISLVKDTSLASTILVTELLRQAQIVAAPT 451 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ +Y A Y ++ Q +IE + ++ Sbjct: 452 FEFFALYGTAAVYYWVICLVLSFGQGRIERRLERY 486 >gi|323526241|ref|YP_004228394.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323383243|gb|ADX55334.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 219 Score = 164 bits (416), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 85/204 (41%), Positives = 136/204 (66%), Gaps = 2/204 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L+++S P L A V+T+ A +S LI G +A++ + S T+ + + YV + R Sbjct: 5 SLLVESLPVLAQGA-VLTVKFAVLSMFFGLIAGAVLALMGVSHSRTL-NWLARVYVSVMR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+FVI+YGLP GI D A +I+L+ N +AY+SE +R +I+ I +GQW A+Y Sbjct: 63 GTPLLVQIFVIYYGLPSFGISLDPTPAGVIALSANVAAYLSESMRGAILGIHQGQWLAAY 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+R+QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ ++AQ I+++TY Sbjct: 123 SLGLSRRQTLRYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTY 182 Query: 187 QPLIIYCELAFVYLILTSFCYIIQ 210 QPL +Y A VY +L ++Q Sbjct: 183 QPLPLYLAAAAVYWVLCQILELLQ 206 >gi|126437886|ref|YP_001073577.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium sp. JLS] gi|126237686|gb|ABO01087.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Mycobacterium sp. JLS] Length = 489 Score = 164 bits (416), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 84/215 (39%), Positives = 135/215 (62%), Gaps = 1/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + LI+D+ L AA+ +T+P+ ISF I L+I +A+ R+ + +++ + FY+ I Sbjct: 273 WQLILDNLWPLARAALTMTIPLTVISFAIGLVIALGVALARLS-PNVVLTNVARFYISII 331 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF++F+ LP GI D F A +I+ +LN Y +EIIRS+I+SIPKGQW+A+ Sbjct: 332 RGTPLLVQLFIVFFALPEFGIRIDPFPAAVIAFSLNVGGYAAEIIRSAILSIPKGQWEAA 391 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 IG+ ++R I+LPQ + PLS+ IS++K TS+ASTI + E+ + AQ + + T Sbjct: 392 ETIGMNYPTSLRRIVLPQAARVAVPPLSNTLISLVKDTSLASTILVTELLRQAQIVAAPT 451 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ +Y A Y ++ Q +IE + ++ Sbjct: 452 FEFFALYGTAAVYYWVICLVLSFGQGRIERRLERY 486 >gi|258425045|ref|ZP_05687916.1| transport system membrane protein [Staphylococcus aureus A9635] gi|282909732|ref|ZP_06317541.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911978|ref|ZP_06319774.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Staphylococcus aureus subsp. aureus WBG10049] gi|257844879|gb|EEV68922.1| transport system membrane protein [Staphylococcus aureus A9635] gi|282323674|gb|EFB53990.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Staphylococcus aureus subsp. aureus WBG10049] gi|282326306|gb|EFB56610.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Staphylococcus aureus subsp. aureus WW2703/97] Length = 242 Score = 164 bits (416), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 94/211 (44%), Positives = 134/211 (63%), Gaps = 14/211 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++FV+ LII F A++RI S + S I YV I RGTP+ Sbjct: 21 QAFGPMLEGLVKYSIPITLVTFVLGLIIALFTALMRISTSKVLRS-IARVYVSIIRGTPM 79 Query: 71 LVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G + + VA II L+LN AY SEIIR IISIPKG Sbjct: 80 IVQLFIIFYGIPELGRLLTNDADNQWTLAPVVAAIIGLSLNVGAYASEIIRGGIISIPKG 139 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+T +QTI+ IILPQ I S L + F+S++K TS+ I + E+F+ AQ Sbjct: 140 QTEAAYSIGMTYRQTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQE 199 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + STTY+ L IY +A +Y ++ C+II I Sbjct: 200 VASTTYEYLTIYVLVALMYWVV---CFIISI 227 >gi|167031268|ref|YP_001666499.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166857756|gb|ABY96163.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 222 Score = 164 bits (416), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 77/167 (46%), Positives = 116/167 (69%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 ++ + YV FRGTPLLVQLFVI++G+P IGI D A +I L+LN +AYI EI+R++ Sbjct: 52 LNWLARVYVSFFRGTPLLVQLFVIYFGMPQIGIELDPIPASLIGLSLNMAAYICEILRAA 111 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SI +GQW+A+ +IG+TR Q +R ILPQ + T+ PL + FIS++K T++A+TI +PE Sbjct: 112 ISSIDRGQWEAAASIGMTRVQAMRRAILPQALRTALPPLGNSFISLVKDTALAATIQVPE 171 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +F+ AQ I + T++ +Y +A +Y +L S Q ++E+ V QH Sbjct: 172 LFRQAQLITARTFEVFTMYVAVAVIYWVLCSILAHFQNRMEARVNQH 218 >gi|49484629|ref|YP_041853.1| transport system membrane protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257423896|ref|ZP_05600325.1| transport system membrane protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257426579|ref|ZP_05602981.1| transport system membrane protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257429215|ref|ZP_05605602.1| transport system membrane protein [Staphylococcus aureus subsp. aureus 68-397] gi|257431861|ref|ZP_05608224.1| transport system membrane protein [Staphylococcus aureus subsp. aureus E1410] gi|257434821|ref|ZP_05610872.1| transport system membrane protein [Staphylococcus aureus subsp. aureus M876] gi|282906756|ref|ZP_06314604.1| polar amino acid transport system permease [Staphylococcus aureus subsp. aureus Btn1260] gi|282915273|ref|ZP_06323050.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus M899] gi|282920997|ref|ZP_06328715.1| polar amino acid transport system permease [Staphylococcus aureus subsp. aureus C427] gi|282925903|ref|ZP_06333551.1| transport system membrane protein [Staphylococcus aureus subsp. aureus C101] gi|283959196|ref|ZP_06376637.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus A017934/97] gi|293497669|ref|ZP_06665523.1| polar amino acid transport system permease [Staphylococcus aureus subsp. aureus 58-424] gi|293511249|ref|ZP_06669945.1| transport system membrane protein [Staphylococcus aureus subsp. aureus M809] gi|293549857|ref|ZP_06672529.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus M1015] gi|295429000|ref|ZP_06821622.1| transport system membrane protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297589505|ref|ZP_06948146.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus MN8] gi|49242758|emb|CAG41483.1| transport system membrane protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257272914|gb|EEV05016.1| transport system membrane protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257276210|gb|EEV07661.1| transport system membrane protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257279696|gb|EEV10283.1| transport system membrane protein [Staphylococcus aureus subsp. aureus 68-397] gi|257282740|gb|EEV12872.1| transport system membrane protein [Staphylococcus aureus subsp. aureus E1410] gi|257285417|gb|EEV15533.1| transport system membrane protein [Staphylococcus aureus subsp. aureus M876] gi|282312732|gb|EFB43136.1| transport system membrane protein [Staphylococcus aureus subsp. aureus C101] gi|282315412|gb|EFB45796.1| polar amino acid transport system permease [Staphylococcus aureus subsp. aureus C427] gi|282320994|gb|EFB51328.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus M899] gi|282329655|gb|EFB59176.1| polar amino acid transport system permease [Staphylococcus aureus subsp. aureus Btn1260] gi|283471633|emb|CAQ50844.1| L-cystine transport system permease protein TcyB [Staphylococcus aureus subsp. aureus ST398] gi|283788788|gb|EFC27615.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus A017934/97] gi|290918904|gb|EFD95980.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus M1015] gi|291096600|gb|EFE26858.1| polar amino acid transport system permease [Staphylococcus aureus subsp. aureus 58-424] gi|291465875|gb|EFF08405.1| transport system membrane protein [Staphylococcus aureus subsp. aureus M809] gi|295126759|gb|EFG56403.1| transport system membrane protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297578016|gb|EFH96729.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus MN8] gi|312437165|gb|ADQ76236.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH60] gi|315194906|gb|EFU25294.1| transport system membrane protein [Staphylococcus aureus subsp. aureus CGS00] Length = 239 Score = 164 bits (416), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 94/211 (44%), Positives = 134/211 (63%), Gaps = 14/211 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++FV+ LII F A++RI S + S I YV I RGTP+ Sbjct: 18 QAFGPMLEGLVKYSIPITLVTFVLGLIIALFTALMRISTSKVLRS-IARVYVSIIRGTPM 76 Query: 71 LVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G + + VA II L+LN AY SEIIR IISIPKG Sbjct: 77 IVQLFIIFYGIPELGRLLTNDADNQWTLAPVVAAIIGLSLNVGAYASEIIRGGIISIPKG 136 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+T +QTI+ IILPQ I S L + F+S++K TS+ I + E+F+ AQ Sbjct: 137 QTEAAYSIGMTYRQTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQE 196 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + STTY+ L IY +A +Y ++ C+II I Sbjct: 197 VASTTYEYLTIYVLVALMYWVV---CFIISI 224 >gi|308063766|gb|ADO05653.1| amino acid ABC transporter, permease protein [Helicobacter pylori Sat464] Length = 240 Score = 164 bits (415), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 138/220 (62%), Gaps = 6/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIIS 55 + E L++++F +L AA ++LP+A ISF++ L I F+A+I+I F +++ Sbjct: 19 LSKERLELLLEAFYPMLKAAFCISLPLAIISFILGLFIAVFVALIKIAPPKHFIHKALLA 78 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + +FYV + RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S + Sbjct: 79 GV-NFYVSLIRGTPLLVQIVVVFYGLPALGVYIDPIPAGIIAFSFNVGAYASETLRASFL 137 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+PK QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI E+F Sbjct: 138 SVPKDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVF 197 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + AQ+ + +Y L IY E A +Y + +IQ ++E Sbjct: 198 RIAQQKANASYDFLPIYLEAALIYWLFCLVLEVIQKRVEK 237 >gi|73542272|ref|YP_296792.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134] gi|72119685|gb|AAZ61948.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134] Length = 234 Score = 164 bits (415), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 83/213 (38%), Positives = 137/213 (64%), Gaps = 2/213 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 LI DS P LL ++ T+ A S L++G +A++ I + ++ I YV I Sbjct: 19 LQLISDSMPVLLQGTLL-TIKFALWSMAFGLVLGMVVALMGISH-NPVLKGIARTYVSIM 76 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQ+FV++YGLP IG+ + A +++L+LN AY+SE +R +I+ I +GQW A+ Sbjct: 77 RGTPLLVQIFVVYYGLPGIGVALEPTPAGVLTLSLNVGAYLSESMRGAILGIARGQWLAA 136 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y++GLT QT+R+++ PQ + + LS+ IS++K TS+ S IT+ E+ +TAQ +++ T Sbjct: 137 YSLGLTPGQTLRYVVGPQALRLAVPSLSNSLISLIKDTSLVSVITVTELLRTAQEVIAAT 196 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 YQPL +Y +A +Y +L++ +Q +E ++ Sbjct: 197 YQPLPLYLAVAAIYWVLSTGLSGLQHVLERRLS 229 >gi|200390875|ref|ZP_03217486.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199603320|gb|EDZ01866.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 222 Score = 164 bits (415), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 88/217 (40%), Positives = 136/217 (62%), Gaps = 2/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E L+I+S P LL A V TL ++ L++GF +A++R+ ++ L FY+ Sbjct: 3 ESIQLVIESLPYLLKGA-VFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVLWLA-RFYIS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I +I KGQW+ Sbjct: 61 IFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISAIDKGQWE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I S Sbjct: 121 AAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T + +Y + +Y ++ + +Q E+ + + Sbjct: 181 RTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQ 217 >gi|15611941|ref|NP_223592.1| amino acid ABC transporter permease [Helicobacter pylori J99] gi|4155450|gb|AAD06454.1| putative AMINO ACID ABC TRANSPORTER, PERMEASE PROTEIN [Helicobacter pylori J99] Length = 237 Score = 164 bits (415), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 138/220 (62%), Gaps = 6/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIIS 55 + E L++++F +L AA ++LP+A ISF++ L+I +A+I+I F +++ Sbjct: 16 LSKERLELLLEAFYPMLKAAFCISLPLAIISFILGLLIAIVVALIKIAPPKHFMHKALLA 75 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + +FYV I RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S + Sbjct: 76 GV-NFYVSIIRGTPLLVQIVVVFYGLPALGVYMDPIPAGIIAFSFNVGAYASETLRASFL 134 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+PK QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI E+F Sbjct: 135 SVPKDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVF 194 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + AQ+ + +Y L IY E A +Y + +IQ ++E Sbjct: 195 RIAQQKANASYDFLPIYLEAALIYWLFCLVLEVIQKRVEK 234 >gi|188527761|ref|YP_001910448.1| amino acid ABC transporter, permease protein [Helicobacter pylori Shi470] gi|188144001|gb|ACD48418.1| amino acid ABC transporter, permease protein [Helicobacter pylori Shi470] Length = 240 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 138/220 (62%), Gaps = 6/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIIS 55 + E L++++F +L AA ++LP+A ISF++ L I F+A+I+I F +++ Sbjct: 19 LSKERLELLLEAFYPMLKAAFCISLPLAIISFILGLFIAVFVALIKIAPPKHFIHKALLA 78 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + +FYV + RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S + Sbjct: 79 GV-NFYVSLIRGTPLLVQIVVVFYGLPALGVYIDPIPAGIIAFSFNVGAYASETLRASFL 137 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+PK QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +T+ E+F Sbjct: 138 SVPKDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTVAEVF 197 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + AQ+ + +Y L IY E A +Y + +IQ ++E Sbjct: 198 RIAQQKANASYDFLPIYLEAALIYWLFCLVLEVIQKRVEK 237 >gi|152986551|ref|YP_001345801.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150961709|gb|ABR83734.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 230 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 87/219 (39%), Positives = 140/219 (63%), Gaps = 6/219 (2%) Query: 4 EWFNLIID----SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 EW +++ ++P LL A+ L A +S V+ L++GF +AV+R+ ++S I Sbjct: 9 EWLANLVELLGMAWPFLLQGAMYTVL-FAAVSMVLGLVLGFSVAVVRVT-KVPLVSQIAA 66 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV FRGTPLLVQ+FV++YGLP +GI F A I++LTLN +AY+SE +R +I+ I K Sbjct: 67 VYVSAFRGTPLLVQIFVLYYGLPSVGIEFTPVTAGILALTLNVAAYLSESMRGAILGIDK 126 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A ++GLT QT+ +II PQ + + LS+ IS++K TS+ S IT+ E+ + Sbjct: 127 GQWEAGLSVGLTWGQTLWNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATK 186 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 +++ T+QPL +Y A +Y +L++ +Q +E+ +T Sbjct: 187 EVIAETFQPLPLYLAAAGIYWLLSALFERVQKALENRLT 225 >gi|257481899|ref|ZP_05635940.1| cystine ABC tranporter, permease protein, putative [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289624705|ref|ZP_06457659.1| cystine ABC tranporter, permease protein, putative [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650261|ref|ZP_06481604.1| cystine ABC tranporter, permease protein, putative [Pseudomonas syringae pv. aesculi str. 2250] gi|298485134|ref|ZP_07003230.1| Putative transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160386|gb|EFI01411.1| Putative transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330865666|gb|EGH00375.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330984783|gb|EGH82886.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009532|gb|EGH89588.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 222 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 76/168 (45%), Positives = 115/168 (68%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +++ I YV FRGTPLLVQLFVI+YGLP +GI + A +I +LN +AY EI+R+ Sbjct: 51 LVNWIARIYVSFFRGTPLLVQLFVIYYGLPELGIQLEPLSAALIGFSLNMAAYACEILRA 110 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I S+ +GQW+A+ +IG+TR QT+R ILPQ T+ PL + FIS++K T++A+TI +P Sbjct: 111 AISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNSFISLVKDTALAATIQVP 170 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E+F+ AQ I + T++ +Y A +Y IL + +Q K+E+ V +H Sbjct: 171 ELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEARVNRH 218 >gi|187923718|ref|YP_001895360.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187714912|gb|ACD16136.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 219 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 137/204 (67%), Gaps = 5/204 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L+++S P L A V+T+ A +S + LI G +A++ + + +++ I YV + R Sbjct: 5 SLLVESLPVLAQGA-VLTVKFAVLSMIFGLIAGAVLALMGVSH-NRVLNWIARIYVSVMR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+FVI+YGLP GI D A +I+L+ N +AY+SE +R +I+ I GQW A+Y Sbjct: 63 GTPLLVQIFVIYYGLPSFGISLDPTPAGVIALSANVAAYLSESMRGAILGIHNGQWLAAY 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+R+QT+R++I PQ + + +S+ IS++K TS+ S IT+ E+ ++AQ I+++TY Sbjct: 123 SLGLSRRQTLRYVIAPQALRIAVPSMSNSLISLIKDTSLVSVITVTELLRSAQEIIASTY 182 Query: 187 QPLIIYCELAFVYLILTSFCYIIQ 210 QPL +Y A VY +L C +++ Sbjct: 183 QPLPLYLAAAAVYWVL---CQVLE 203 >gi|330886120|gb|EGH20021.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] Length = 200 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 76/168 (45%), Positives = 115/168 (68%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +++ I YV FRGTPLLVQLFVI+YGLP +GI + A +I +LN +AY EI+R+ Sbjct: 29 LVNWIARIYVSFFRGTPLLVQLFVIYYGLPELGIQLEPLSAALIGFSLNMAAYACEILRA 88 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I S+ +GQW+A+ +IG+TR QT+R ILPQ T+ PL + FIS++K T++A+TI +P Sbjct: 89 AISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNSFISLVKDTALAATIQVP 148 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E+F+ AQ I + T++ +Y A +Y IL + +Q K+E+ V +H Sbjct: 149 ELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEARVNRH 196 >gi|28872293|ref|NP_794912.1| cystine ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|213969394|ref|ZP_03397531.1| cystine ABC tranporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301386653|ref|ZP_07235071.1| cystine ABC transporter, permease protein, putative [Pseudomonas syringae pv. tomato Max13] gi|302061130|ref|ZP_07252671.1| cystine ABC transporter, permease protein, putative [Pseudomonas syringae pv. tomato K40] gi|302132934|ref|ZP_07258924.1| cystine ABC transporter, permease protein, putative [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28855547|gb|AAO58607.1| cystine ABC transporter, permease protein, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|213925765|gb|EEB59323.1| cystine ABC tranporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|330966437|gb|EGH66697.1| amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] gi|331016087|gb|EGH96143.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 222 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 76/168 (45%), Positives = 115/168 (68%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +++ I YV FRGTPLLVQLFVI+YGLP +GI + A +I +LN +AY EI+R+ Sbjct: 51 LVNWIARIYVSFFRGTPLLVQLFVIYYGLPELGIQLEPLSAALIGFSLNMAAYACEILRA 110 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I S+ +GQW+A+ +IG+TR QT+R ILPQ T+ PL + FIS++K T++A+TI +P Sbjct: 111 AIGSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNSFISLVKDTALAATIQVP 170 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E+F+ AQ I + T++ +Y A +Y IL + +Q K+E+ V +H Sbjct: 171 ELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEARVNRH 218 >gi|71738018|ref|YP_272644.1| cystine ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558571|gb|AAZ37782.1| cystine ABC tranporter, permease protein, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322115|gb|EFW78211.1| cystine ABC transporter, permease protein, putative [Pseudomonas syringae pv. glycinea str. B076] Length = 222 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 76/168 (45%), Positives = 115/168 (68%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +++ I YV FRGTPLLVQLFVI+YGLP +GI + A +I +LN +AY EI+R+ Sbjct: 51 LVNWIARIYVSFFRGTPLLVQLFVIYYGLPEMGIQLEPLSAALIGFSLNMAAYACEILRA 110 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I S+ +GQW+A+ +IG+TR QT+R ILPQ T+ PL + FIS++K T++A+TI +P Sbjct: 111 AISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNSFISLVKDTALAATIQVP 170 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E+F+ AQ I + T++ +Y A +Y IL + +Q K+E+ V +H Sbjct: 171 ELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEARVNRH 218 >gi|217032729|ref|ZP_03438213.1| hypothetical protein HPB128_158g8 [Helicobacter pylori B128] gi|298736105|ref|YP_003728630.1| putative polar amino acid transport system permease protein [Helicobacter pylori B8] gi|216945545|gb|EEC24200.1| hypothetical protein HPB128_158g8 [Helicobacter pylori B128] gi|298355294|emb|CBI66166.1| putative polar amino acid transport system permease protein [Helicobacter pylori B8] Length = 237 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 137/220 (62%), Gaps = 6/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIIS 55 + E L++++F +L AA ++LP+A SF++ L I F+A+I+I F +++ Sbjct: 16 LSKERLELLLEAFYPMLKAAFCISLPLAVTSFILGLFIAVFVALIKIAPPKHFVHKALLT 75 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + +FYV I RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S + Sbjct: 76 GV-NFYVSIIRGTPLLVQIVVVFYGLPALGVYMDPIPAGIIAFSFNVGAYASETLRASFL 134 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+PK QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI E+F Sbjct: 135 SVPKDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVF 194 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + AQ+ + +Y L IY E A +Y + +IQ ++E Sbjct: 195 RIAQQKANASYDFLPIYLEAALIYWLFCLVLEVIQKRVEK 234 >gi|16760898|ref|NP_456515.1| ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765290|ref|NP_460905.1| ABC-type amino acid transporter permease component [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141410|ref|NP_804752.1| ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62180526|ref|YP_216943.1| putative ABC-type amino acid transporter, permease component [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|167552820|ref|ZP_02346571.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167993521|ref|ZP_02574615.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168239188|ref|ZP_02664246.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168822992|ref|ZP_02834992.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194735316|ref|YP_002114985.1| amino acid ABC transporter His/Glu/Gln/Arg/opine family, permease [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248583|ref|YP_002146071.1| amino acid ABC transporter His/Glu/Gln/Arg/opine family, permease [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|204930985|ref|ZP_03221811.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213053511|ref|ZP_03346389.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213417112|ref|ZP_03350256.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213426354|ref|ZP_03359104.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213855799|ref|ZP_03384039.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224583547|ref|YP_002637345.1| ABC-type amino acid transporter, permease component [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238912475|ref|ZP_04656312.1| putative ABC-type amino acid transporter, permease component [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289824074|ref|ZP_06543672.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25296622|pir||AB0750 probable ABC transporter membrane protein STY2160 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16420486|gb|AAL20864.1| putative ABC-type amino acid transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503195|emb|CAD05701.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29137037|gb|AAO68601.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62128159|gb|AAX65862.1| putative ABC-type amino acid transporter, permease component [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194710818|gb|ACF90039.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197212286|gb|ACH49683.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197288074|gb|EDY27461.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204320029|gb|EDZ05234.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205322601|gb|EDZ10440.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205328383|gb|EDZ15147.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205340660|gb|EDZ27424.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|224468074|gb|ACN45904.1| putative ABC-type amino acid transporter, permease component [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247118|emb|CBG24941.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993938|gb|ACY88823.1| putative ABC-type amino acid transporter permease component [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158466|emb|CBW17976.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912942|dbj|BAJ36916.1| amine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085430|emb|CBY95211.1| probable amino-acid ABC transporter permease protein yckA [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224595|gb|EFX49658.1| Cystine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616945|gb|EFY13853.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618185|gb|EFY15077.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625855|gb|EFY22674.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626307|gb|EFY23117.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632722|gb|EFY29467.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639064|gb|EFY35757.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640505|gb|EFY37158.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645986|gb|EFY42503.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649893|gb|EFY46314.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655501|gb|EFY51809.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660279|gb|EFY56517.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662960|gb|EFY59167.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668145|gb|EFY64304.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674095|gb|EFY70189.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675552|gb|EFY71626.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683036|gb|EFY79052.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686730|gb|EFY82708.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322715002|gb|EFZ06573.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130230|gb|ADX17660.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195381|gb|EFZ80561.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199272|gb|EFZ84367.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204437|gb|EFZ89443.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207527|gb|EFZ92475.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211852|gb|EFZ96683.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217512|gb|EGA02231.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223590|gb|EGA07905.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231534|gb|EGA15647.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235977|gb|EGA20056.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240547|gb|EGA24590.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245439|gb|EGA29439.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250209|gb|EGA34101.1| amino acid ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253980|gb|EGA37804.1| amino acid ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255493|gb|EGA39254.1| amino acid ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262090|gb|EGA45653.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266213|gb|EGA49703.1| amino acid ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270678|gb|EGA54119.1| amino acid ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|332988841|gb|AEF07824.1| putative ABC-type amino acid transporter permease component [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 222 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 87/217 (40%), Positives = 135/217 (62%), Gaps = 2/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E L+I+S P LL A V TL ++ L++GF +A++R+ + + FY+ Sbjct: 3 ESIQLVIESLPYLLKGA-VFTLQLSIGGMFFGLLLGFVLALMRMS-PLWPVRWLARFYIS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I +I KGQW+ Sbjct: 61 IFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISAIDKGQWE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I S Sbjct: 121 AAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T + +Y + +Y ++ + +Q E+ + + Sbjct: 181 RTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQ 217 >gi|312973871|ref|ZP_07788043.1| L-cystine transport system permease protein tcyB [Escherichia coli 1827-70] gi|310332466|gb|EFP99701.1| L-cystine transport system permease protein tcyB [Escherichia coli 1827-70] Length = 222 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 87/217 (40%), Positives = 135/217 (62%), Gaps = 2/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E L+IDS P LL A TL ++ L++GF +A++R+ ++ + FY+ Sbjct: 3 ESIQLVIDSLPFLLKGA-GYTLQLSIGGMFFGLLLGFILALMRLS-PIWLVRWLARFYIS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY +E +R++I SI KGQW+ Sbjct: 61 IFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQWE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I S Sbjct: 121 AAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T + +Y + +Y I+ + +Q E+ + + Sbjct: 181 RTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQ 217 >gi|165977040|ref|YP_001652633.1| ABC-type amino acid transport system, permease component [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165877141|gb|ABY70189.1| ABC-type amino acid transport system, permease component [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 217 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 86/211 (40%), Positives = 131/211 (62%), Gaps = 4/211 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS----LIMHFYVWIFRGT 68 F ++ AA++V++P+A SF+I + I +A+IR+ + ++ I+ Y+ I RGT Sbjct: 3 FSPMVEAAVLVSIPLAIASFIIGMAIAVGVALIRVTPVNGMLHRIALAIVKVYISIIRGT 62 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P+LVQ+ V+FYGLP IG+ D A II +LN AY SE +R++I S+PKGQW+A Y I Sbjct: 63 PMLVQISVVFYGLPAIGVYIDPIPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTI 122 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+T QT R II PQ I PLS+ FI + K TS+AS +T+ E+F+ AQ++ + +Y Sbjct: 123 GMTYMQTFRWIIAPQAIRVVIPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANISYDF 182 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 L +Y E +Y ++IQ K+E + Sbjct: 183 LPVYIEAGLIYWCFCWVLFLIQAKLERRFNR 213 >gi|82543614|ref|YP_407561.1| transport system permease protein [Shigella boydii Sb227] gi|81245025|gb|ABB65733.1| putative transport system permease protein [Shigella boydii Sb227] gi|320184747|gb|EFW59539.1| Cystine ABC transporter, permease protein [Shigella flexneri CDC 796-83] gi|332096720|gb|EGJ01711.1| L-cystine transport system permease protein tcyB [Shigella boydii 3594-74] Length = 222 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 88/219 (40%), Positives = 136/219 (62%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFY 61 E L+IDS P LL A TL ++ L++GF +A++R+ I + + FY Sbjct: 3 ESIQLVIDSLPFLLKGA-GYTLQLSIGGMFFGLLLGFILALMRL---SPIWPVRWLARFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + IFRGTPL+ QLF+I+YGLP GI D ++ +I L+LN +AY +E +R++I SI KGQ Sbjct: 59 ISIFRGTPLIAQLFMIYYGLPQFGIELDPILSAMIGLSLNTAAYAAETLRAAISSIDKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y I+ + +Q E+ + + Sbjct: 179 TSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQ 217 >gi|171320532|ref|ZP_02909558.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171094225|gb|EDT39306.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 219 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 83/215 (38%), Positives = 141/215 (65%), Gaps = 2/215 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E +L+I + P ++ A++ TL A S + L++G +A++RI S+ + S + YV Sbjct: 2 EALDLVIHTLPVMVKGALL-TLKFAVASMALGLVVGLVVAIMRIG-SNRLASGLAQGYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQ+FV++YGLP +GI D A I +LTLN AY+SE +R +I+ I +GQW Sbjct: 60 LMRGTPLLVQMFVVYYGLPDLGITLDPTTAGIFTLTLNAGAYLSESMRGAILGIGRGQWA 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A++++GLT QT+RHI+ PQ + + L + IS++K TS+ S IT+ E+ ++ Q +++ Sbjct: 120 AAHSLGLTHMQTLRHIVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIA 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 T+QPL +Y A +Y +L++ +Q ++E+ ++ Sbjct: 180 ATFQPLPLYLAAAALYWVLSTLLTRLQGRVETRLS 214 >gi|307729487|ref|YP_003906711.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307584022|gb|ADN57420.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 219 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 84/204 (41%), Positives = 136/204 (66%), Gaps = 2/204 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L+++S P L A V+T+ A +S LI G +A++ + S T+ + + YV + R Sbjct: 5 SLLVESLPVLAQGA-VLTVKFAVLSMFFGLIAGAVLALMGVSHSRTL-NRLARIYVSVMR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+FVI+YGLP GI + A +I+L+ N +AY+SE +R +I+ I +GQW A+Y Sbjct: 63 GTPLLVQIFVIYYGLPSFGISLEPTPAGVIALSANVAAYLSESMRGAILGIHQGQWLAAY 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+R+QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ ++AQ I+++TY Sbjct: 123 SLGLSRRQTLRYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTY 182 Query: 187 QPLIIYCELAFVYLILTSFCYIIQ 210 QPL +Y A VY +L ++Q Sbjct: 183 QPLPLYLAAAAVYWVLCQILELLQ 206 >gi|66043626|ref|YP_233467.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63254333|gb|AAY35429.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] gi|330971784|gb|EGH71850.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 222 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 76/167 (45%), Positives = 114/167 (68%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 ++ I YV FRGTPLLVQLFVI+YGLP +GI + A +I +LN +AY EI+R++ Sbjct: 52 VNWIARIYVSFFRGTPLLVQLFVIYYGLPELGIQLEPLSAALIGFSLNMAAYACEILRAA 111 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I S+ +GQW+A+ +IG+TR QT+R ILPQ T+ PL + FIS++K T++A+TI +PE Sbjct: 112 ISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNSFISLVKDTALAATIQVPE 171 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +F+ AQ I + T++ +Y A +Y IL + +Q K+E+ V +H Sbjct: 172 LFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEARVNRH 218 >gi|198242194|ref|YP_002215134.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197936710|gb|ACH74043.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326622883|gb|EGE29228.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 222 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 87/217 (40%), Positives = 135/217 (62%), Gaps = 2/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E L+I+S P LL A V TL ++ L++GF +A++R+ + + FY+ Sbjct: 3 ESIQLVIESLPYLLKGA-VFTLQLSIGGMFFGLLLGFVLALMRMS-PLWPVRWLARFYIS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I +I KGQW+ Sbjct: 61 IFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISAIDKGQWE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I S Sbjct: 121 AAASIGMTPWQTLRRAILPQAAHVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T + +Y + +Y ++ + +Q E+ + + Sbjct: 181 RTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQ 217 >gi|270262368|ref|ZP_06190640.1| transporter [Serratia odorifera 4Rx13] gi|270044244|gb|EFA17336.1| transporter [Serratia odorifera 4Rx13] Length = 220 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 75/167 (44%), Positives = 114/167 (68%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +S + YV +FRGTPL+ QLF+I+YGLP GI FD F A +I L+LN +AY SE +R++ Sbjct: 51 LSWLSRIYVSLFRGTPLIAQLFMIYYGLPQFGIEFDPFPAALIGLSLNTAAYTSETLRAA 110 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SI KGQW+A+ +IG+TR QT+R +ILPQ T+ PL + FI ++K TS+A+TI +PE Sbjct: 111 ISSIEKGQWEAAASIGMTRWQTMRRVILPQAARTALPPLGNSFIGLVKDTSLAATIQVPE 170 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +F+ AQ I S T + +Y + +Y ++ + +Q ++E+ V + Sbjct: 171 LFRQAQLITSRTLEVFTLYLAASLIYWVMATLLSALQNRLEAHVNRQ 217 >gi|289674586|ref|ZP_06495476.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae FF5] gi|302186281|ref|ZP_07262954.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae 642] gi|330938697|gb|EGH42255.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] gi|330951253|gb|EGH51513.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 222 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 76/167 (45%), Positives = 114/167 (68%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 ++ I YV FRGTPLLVQLFVI+YGLP +GI + A +I +LN +AY EI+R++ Sbjct: 52 VNWIARIYVSFFRGTPLLVQLFVIYYGLPELGIQLEPLSAALIGFSLNMAAYACEILRAA 111 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I S+ +GQW+A+ +IG+TR QT+R ILPQ T+ PL + FIS++K T++A+TI +PE Sbjct: 112 ISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNSFISLVKDTALAATIQVPE 171 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +F+ AQ I + T++ +Y A +Y IL + +Q K+E+ V +H Sbjct: 172 LFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEARVNRH 218 >gi|301050727|ref|ZP_07197586.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|300297595|gb|EFJ53980.1| ABC transporter, permease protein [Escherichia coli MS 185-1] Length = 222 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 88/219 (40%), Positives = 135/219 (61%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFY 61 E L+IDS P LL A TL ++ L++GF +A++R+ I + + FY Sbjct: 3 ESIQLVIDSLPFLLKGA-GYTLQLSIGGMFFGLLLGFILALMRL---SPIWPVRWLARFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY +E +R++I SI KGQ Sbjct: 59 ISIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQTMRRAILPQAARGALPPLSNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y I+ + +Q E+ + + Sbjct: 179 TSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQ 217 >gi|170692241|ref|ZP_02883404.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170142671|gb|EDT10836.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 219 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 135/204 (66%), Gaps = 2/204 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L+++S P L A V+T+ A +S LI G +A++ + S T+ + + YV + R Sbjct: 5 SLLVESLPALAQGA-VLTVKFAVLSMFFGLIAGAVLALMGVSHSRTL-NRLARVYVSVMR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+FVI+YGLP I D A +I+L+ N +AY+SE +R +I+ I +GQW A+Y Sbjct: 63 GTPLLVQIFVIYYGLPSFNISLDPTPAGVIALSANVAAYLSESMRGAILGIHQGQWLAAY 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+R+QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ ++AQ ++++TY Sbjct: 123 SLGLSRRQTLRYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEVIASTY 182 Query: 187 QPLIIYCELAFVYLILTSFCYIIQ 210 QPL +Y A VY +L ++Q Sbjct: 183 QPLPLYLAAAAVYWVLCQILELLQ 206 >gi|317011145|gb|ADU84892.1| amino acid ABC transporter permease [Helicobacter pylori SouthAfrica7] Length = 237 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 138/220 (62%), Gaps = 6/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIIS 55 + E L++++F +L AA ++LP+A ISF++ L++ +A+I+I F +++ Sbjct: 16 LSKERLELLLEAFYPMLKAAFCISLPLAIISFILGLLLAIVVALIKIAPPKRFIHRALLA 75 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + +FYV I RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S + Sbjct: 76 GV-NFYVSIIRGTPLLVQIVVVFYGLPALGVYMDPIPAGIIAFSFNVGAYASETLRASFL 134 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+PK QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI EIF Sbjct: 135 SVPKDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEIF 194 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + AQ+ + +Y L IY E A +Y + +IQ ++E Sbjct: 195 RIAQQKANASYDFLPIYLEAALIYWLFCLVLEVIQKRVEK 234 >gi|113866799|ref|YP_725288.1| ABC transporter permease [Ralstonia eutropha H16] gi|113525575|emb|CAJ91920.1| ABC-type transporter, permease component: PAAT family [Ralstonia eutropha H16] Length = 219 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 83/213 (38%), Positives = 136/213 (63%), Gaps = 2/213 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 L+ DS P LL ++ T+ A S V L++G +A++ I S ++ YV I Sbjct: 4 LQLVTDSLPVLLQGTLL-TIKFALWSMVFGLMLGTVVALMGISHSR-VLKAAARTYVSIM 61 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQ+FV++YGLP IGI + A +++L+LN AY+SE +R +I+ + +GQW A+ Sbjct: 62 RGTPLLVQIFVVYYGLPGIGIALEPTPAGVLTLSLNVGAYLSESMRGAILGVSRGQWLAA 121 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y++GLT Q +R++I PQ + + LS+ IS++K TS+ S IT+ E+ +TAQ +++ T Sbjct: 122 YSLGLTPAQALRYVIGPQALRLAVPSLSNSLISLIKDTSLVSVITVTELLRTAQEVIAAT 181 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 YQPL +Y +A +Y +L++ +Q +E ++ Sbjct: 182 YQPLPLYLAVAAIYWVLSTGLSGVQHMLERRLS 214 >gi|311071018|ref|YP_003975941.1| cystine ABC transporter permease [Bacillus atrophaeus 1942] gi|310871535|gb|ADP35010.1| cystine ABC transporter (permease) [Bacillus atrophaeus 1942] Length = 234 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 93/216 (43%), Positives = 134/216 (62%), Gaps = 2/216 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++L+ SF +L I T+P+ +SF+ +II A+ R+ T + + YV Sbjct: 17 WDLVEQSFWPILSGGIYYTIPLTILSFIFGMIIALVTALARMS-KITPLRWVFGVYVSAV 75 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+IFY P I D F + II+ +LN AY SEIIR+SI+S+PKGQW+A Sbjct: 76 RGTPLLVQLFIIFYMFPAFNITLDPFPSAIIAFSLNVGAYASEIIRASILSVPKGQWEAG 135 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y IG+T ++T+ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 136 YTIGMTHQKTLFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVVELFRKAQEIGARN 195 Query: 186 Y-QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Q L+IY E AF+Y I+ S + Q IE + ++ Sbjct: 196 LDQILVIYIEAAFIYWIICSLLSLAQHLIERRLDRY 231 >gi|308184722|ref|YP_003928855.1| amino acid ABC transporter, permease protein [Helicobacter pylori SJM180] gi|308060642|gb|ADO02538.1| amino acid ABC transporter, permease protein [Helicobacter pylori SJM180] Length = 240 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 87/217 (40%), Positives = 136/217 (62%), Gaps = 6/217 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIISLIM 58 E L++++F +L AA ++LP+A ISF++ L I +A+I+I F +++ + Sbjct: 22 ERLELLLEAFYPMLKAAFCISLPLAIISFILGLFIAVMVALIKIAPPKHFVHKALLTGV- 80 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 +FYV + RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S +S+P Sbjct: 81 NFYVSLIRGTPLLVQIVVVFYGLPALGVYMDPIPAGIIAFSFNVGAYASETLRASFLSVP 140 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 K QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI E+F+ A Sbjct: 141 KDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIA 200 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q+ + +Y L IY E A +Y + +IQ ++E Sbjct: 201 QQKANASYDFLPIYLEAALIYWLFCLVLEVIQKRVEK 237 >gi|297380137|gb|ADI35024.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Helicobacter pylori v225d] Length = 237 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 137/220 (62%), Gaps = 6/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIIS 55 + E L++++F +L AA ++LP+A +SF++ L I +A+I+I F +++ Sbjct: 16 LSKERLELLLEAFYPMLKAAFCISLPLAIVSFILGLFIAVLVALIKIAPPKHFIHKALLA 75 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + +FYV + RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S + Sbjct: 76 GV-NFYVSLIRGTPLLVQIVVVFYGLPALGVYIDPIPAGIIAFSFNVGAYASETLRASFL 134 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+PK QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI EIF Sbjct: 135 SVPKDQWDSSLSLGLNYLQTFWHVIFLQALKVATPSLSNTFISLFKETSLASVVTIAEIF 194 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + AQ+ + +Y L IY E A +Y + +IQ ++E Sbjct: 195 RIAQQKANASYDFLPIYLEAALIYWLFCLVLEVIQKRVEK 234 >gi|152970960|ref|YP_001336069.1| amino acid ABC transporter membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895476|ref|YP_002920211.1| putative amino-acid ABC transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|262043450|ref|ZP_06016573.1| L-cystine ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330000993|ref|ZP_08303864.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|150955809|gb|ABR77839.1| putative amino acid transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238547793|dbj|BAH64144.1| putative amino-acid ABC transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259039192|gb|EEW40340.1| L-cystine ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328537828|gb|EGF64022.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 222 Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 87/217 (40%), Positives = 134/217 (61%), Gaps = 2/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E L+IDS P LL A V TL ++ L++GF +A++R+ + + Y+ Sbjct: 3 ESIQLVIDSAPFLLKGA-VFTLQLSIGGMFFGLVLGFILALMRMS-PVWPVKWLARMYIS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY +E +R++I SI KGQW+ Sbjct: 61 IFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I S Sbjct: 121 AAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T + +Y + +Y ++ + +Q E+ + + Sbjct: 181 RTLEVFTMYLAASLIYWVMATVLSSLQNYFENQLNRQ 217 >gi|193066391|ref|ZP_03047439.1| L-cystine ABC transporter, permease protein [Escherichia coli E22] gi|194429920|ref|ZP_03062430.1| L-cystine ABC transporter, permease protein [Escherichia coli B171] gi|260844322|ref|YP_003222100.1| putative transporter subunit [Escherichia coli O103:H2 str. 12009] gi|192925976|gb|EDV80622.1| L-cystine ABC transporter, permease protein [Escherichia coli E22] gi|194412009|gb|EDX28321.1| L-cystine ABC transporter, permease protein [Escherichia coli B171] gi|257759469|dbj|BAI30966.1| predicted transporter subunit [Escherichia coli O103:H2 str. 12009] gi|323158598|gb|EFZ44612.1| L-cystine transport system permease protein tcyB [Escherichia coli E128010] Length = 222 Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 88/219 (40%), Positives = 135/219 (61%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFY 61 E L+IDS P LL A TL ++ L++GF +A++R+ I + + FY Sbjct: 3 ESIQLVIDSLPFLLKGA-EYTLQLSIGGMFFGLLLGFILALMRL---SPIWPVRWLARFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY +E +R++I SI KGQ Sbjct: 59 ISIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y I+ + +Q E+ + + Sbjct: 179 TSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQ 217 >gi|206580951|ref|YP_002237707.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|290508767|ref|ZP_06548138.1| cystine transport system permease [Klebsiella sp. 1_1_55] gi|206570009|gb|ACI11785.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|289778161|gb|EFD86158.1| cystine transport system permease [Klebsiella sp. 1_1_55] Length = 222 Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 87/217 (40%), Positives = 134/217 (61%), Gaps = 2/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E L+IDS P LL A V TL ++ L++GF +A++R+ + + Y+ Sbjct: 3 ESIQLVIDSAPFLLKGA-VFTLQLSIGGMFFGLVLGFILALMRMS-PLWPVKWLARMYIS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY +E +R++I SI KGQW+ Sbjct: 61 IFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I S Sbjct: 121 AAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T + +Y + +Y ++ + +Q E+ + + Sbjct: 181 RTLEVFTMYLAASLIYWVMATVLSSLQNYFENQLNRQ 217 >gi|157157239|ref|YP_001463222.1| L-cystine ABC transporter, permease protein [Escherichia coli E24377A] gi|157079269|gb|ABV18977.1| L-cystine ABC transporter, permease protein [Escherichia coli E24377A] Length = 222 Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 88/219 (40%), Positives = 135/219 (61%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFY 61 E L+IDS P LL A TL ++ L++GF +A++R+ I + + FY Sbjct: 3 ESIQLVIDSLPFLLKGA-GYTLQLSIGGMFFGLLLGFILALMRL---SPIWPVRWMARFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY +E +R++I SI KGQ Sbjct: 59 ISIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y I+ + +Q E+ + + Sbjct: 179 TSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQ 217 >gi|51596054|ref|YP_070245.1| amino-acid ABC transporter (permease) [Yersinia pseudotuberculosis IP 32953] gi|153950219|ref|YP_001401242.1| amino acid ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|186895160|ref|YP_001872272.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|51589336|emb|CAH20958.1| putative amino-acid ABC transporter (permease) [Yersinia pseudotuberculosis IP 32953] gi|152961714|gb|ABS49175.1| amino acid ABC transporter, permease protein [Yersinia pseudotuberculosis IP 31758] gi|186698186|gb|ACC88815.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis PB1/+] Length = 220 Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 92/219 (42%), Positives = 140/219 (63%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFY 61 E L++DS P LL A + TL ++ + L++GF +A++R+ F+ SLI FY Sbjct: 3 ESMQLVLDSAPFLLKGAWL-TLQLSLGGMFLGLLLGFMLAMMRLSHFWP---FSLISRFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I SI KGQ Sbjct: 59 VSIFRGTPLIAQLFMIYYGLPQFGIELDPMPAALIGLSLNTAAYTSETLRAAISSIEKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+TR Q + +ILPQ T+ PL + FI ++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTRWQALYRVILPQAGRTALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y I+ + +Q ++E+ V + Sbjct: 179 TSRTMEVFTMYLAASLIYWIMATLLSALQNRLEAHVNRQ 217 >gi|170769381|ref|ZP_02903834.1| L-cystine ABC transporter, permease protein [Escherichia albertii TW07627] gi|170121705|gb|EDS90636.1| L-cystine ABC transporter, permease protein [Escherichia albertii TW07627] Length = 222 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 87/217 (40%), Positives = 134/217 (61%), Gaps = 2/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E L+IDS P LL A TL ++ L++GF +A++R+ + + FY+ Sbjct: 3 ESIQLVIDSLPFLLKGA-GYTLQLSIGGMFFGLLLGFILALMRLS-PVWPVRWLARFYIS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY +E +R++I SI KGQW+ Sbjct: 61 IFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQWE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I S Sbjct: 121 AAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T + +Y + +Y I+ + +Q E+ + + Sbjct: 181 RTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQ 217 >gi|323186798|gb|EFZ72118.1| L-cystine transport system permease protein tcyB [Escherichia coli RN587/1] Length = 222 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 88/219 (40%), Positives = 135/219 (61%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFY 61 E L+IDS P LL A TL ++ L++GF +A++R+ I + + FY Sbjct: 3 ESIQLVIDSLPFLLKGA-GYTLQLSIGGMFFGLLLGFILALMRL---SPIWPVRWLARFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY +E +R++I SI KGQ Sbjct: 59 ISIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y I+ + +Q E+ + + Sbjct: 179 TSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQ 217 >gi|16129865|ref|NP_416428.1| inner membrane protein, predicted transporter subunit: membrane component of ABC superfamily [Escherichia coli str. K-12 substr. MG1655] gi|24113295|ref|NP_707805.1| putative transport system permease protein (former yecC) [Shigella flexneri 2a str. 301] gi|26248184|ref|NP_754224.1| amino-acid ABC transporter permease YecS [Escherichia coli CFT073] gi|30063362|ref|NP_837533.1| putative transport system permease protein (former yecC) [Shigella flexneri 2a str. 2457T] gi|74311736|ref|YP_310155.1| putative transport system permease [Shigella sonnei Ss046] gi|89108753|ref|AP_002533.1| predicted transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|91211137|ref|YP_541123.1| putative transport system permease [Escherichia coli UTI89] gi|110805891|ref|YP_689411.1| putative transport system permease [Shigella flexneri 5 str. 8401] gi|117624060|ref|YP_852973.1| putative transport system permease protein [Escherichia coli APEC O1] gi|157161390|ref|YP_001458708.1| L-cystine ABC transporter, permease protein [Escherichia coli HS] gi|170019744|ref|YP_001724698.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|170081566|ref|YP_001730886.1| ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170681367|ref|YP_001743325.1| L-cystine ABC transporter permease [Escherichia coli SMS-3-5] gi|188494690|ref|ZP_03001960.1| L-cystine ABC transporter, permease protein [Escherichia coli 53638] gi|191168290|ref|ZP_03030083.1| L-cystine ABC transporter, permease protein [Escherichia coli B7A] gi|191173310|ref|ZP_03034840.1| L-cystine ABC transporter, permease protein [Escherichia coli F11] gi|193071132|ref|ZP_03052056.1| L-cystine ABC transporter, permease protein [Escherichia coli E110019] gi|194434972|ref|ZP_03067215.1| L-cystine ABC transporter, permease protein [Shigella dysenteriae 1012] gi|194439561|ref|ZP_03071634.1| L-cystine ABC transporter, permease protein [Escherichia coli 101-1] gi|209919340|ref|YP_002293424.1| putative amino acid ABC transporter permease [Escherichia coli SE11] gi|218554502|ref|YP_002387415.1| putative ABC transporter permease [Escherichia coli IAI1] gi|218558776|ref|YP_002391689.1| transporter subunit: permease component of ABC superfamily transporter [Escherichia coli S88] gi|218689911|ref|YP_002398123.1| putative ABC transporter permease [Escherichia coli ED1a] gi|218695525|ref|YP_002403192.1| putative transporter subunit: permease component of ABC superfamily transporter [Escherichia coli 55989] gi|218699518|ref|YP_002407147.1| putative ABC transporter permease [Escherichia coli IAI39] gi|218705413|ref|YP_002412932.1| putative ABC transporter permease [Escherichia coli UMN026] gi|227885655|ref|ZP_04003460.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Escherichia coli 83972] gi|237705874|ref|ZP_04536355.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|238901127|ref|YP_002926923.1| putative transporter subunit: membrane component of ABC superfamily [Escherichia coli BW2952] gi|253773129|ref|YP_003035960.1| polar amino acid ABC transporter inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|256017884|ref|ZP_05431749.1| polar amino acid ABC transporter, inner membrane subunit [Shigella sp. D9] gi|256022424|ref|ZP_05436289.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia sp. 4_1_40B] gi|260855898|ref|YP_003229789.1| putative transporter subunit [Escherichia coli O26:H11 str. 11368] gi|260868510|ref|YP_003234912.1| putative transporter subunit [Escherichia coli O111:H- str. 11128] gi|293405404|ref|ZP_06649396.1| inner membrane amino-acid ABC transporter permease yecS [Escherichia coli FVEC1412] gi|293410277|ref|ZP_06653853.1| inner membrane amino-acid ABC transporter permease yecS [Escherichia coli B354] gi|293415229|ref|ZP_06657872.1| inner membrane amino-acid ABC transporter permease yecS [Escherichia coli B185] gi|293446300|ref|ZP_06662722.1| inner membrane amino-acid ABC transporter permease yecS [Escherichia coli B088] gi|298381048|ref|ZP_06990647.1| inner membrane amino-acid ABC transporter permease yecS [Escherichia coli FVEC1302] gi|300818658|ref|ZP_07098866.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300822310|ref|ZP_07102451.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|300899172|ref|ZP_07117450.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|300904805|ref|ZP_07122632.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|300917360|ref|ZP_07134029.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|300925011|ref|ZP_07140934.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|300928949|ref|ZP_07144453.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|300935894|ref|ZP_07150850.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|300951542|ref|ZP_07165376.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300956566|ref|ZP_07168847.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|300982287|ref|ZP_07175997.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|300993931|ref|ZP_07180606.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|301029370|ref|ZP_07192466.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|301305259|ref|ZP_07211356.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|301327708|ref|ZP_07220914.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|306814258|ref|ZP_07448424.1| putative transporter subunit [Escherichia coli NC101] gi|307314175|ref|ZP_07593785.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|309795972|ref|ZP_07690385.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|331647511|ref|ZP_08348603.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli M605] gi|331653325|ref|ZP_08354330.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli M718] gi|331657963|ref|ZP_08358925.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli TA206] gi|331663416|ref|ZP_08364326.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli TA143] gi|331668612|ref|ZP_08369460.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli TA271] gi|331673436|ref|ZP_08374204.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli TA280] gi|331677803|ref|ZP_08378478.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli H591] gi|331683470|ref|ZP_08384071.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli H299] gi|332278911|ref|ZP_08391324.1| L-cystine ABC transporter [Shigella sp. D9] gi|84027923|sp|P0AFT3|YECS_ECOL6 RecName: Full=Inner membrane amino-acid ABC transporter permease protein yecS gi|84027924|sp|P0AFT2|YECS_ECOLI RecName: Full=Inner membrane amino-acid ABC transporter permease protein yecS gi|84027925|sp|P0AFT4|YECS_SHIFL RecName: Full=Inner membrane amino-acid ABC transporter permease protein yecS gi|26108588|gb|AAN80791.1|AE016762_44 Hypothetical amino-acid ABC transporter permease protein yecS [Escherichia coli CFT073] gi|1736577|dbj|BAA15738.1| predicted transporter subunit [Escherichia coli str. K12 substr. W3110] gi|1788226|gb|AAC74985.1| inner membrane protein, predicted transporter subunit: membrane component of ABC superfamily [Escherichia coli str. K-12 substr. MG1655] gi|24052302|gb|AAN43512.1| putative transport system permease protein (former yecC) [Shigella flexneri 2a str. 301] gi|30041614|gb|AAP17342.1| putative transport system permease protein (former yecC) [Shigella flexneri 2a str. 2457T] gi|73855213|gb|AAZ87920.1| putative transport system permease protein (former yecC) [Shigella sonnei Ss046] gi|91072711|gb|ABE07592.1| putative transport system permease protein [Escherichia coli UTI89] gi|110615439|gb|ABF04106.1| putative transport system permease protein [Shigella flexneri 5 str. 8401] gi|115513184|gb|ABJ01259.1| putative transport system permease protein [Escherichia coli APEC O1] gi|157067070|gb|ABV06325.1| L-cystine ABC transporter, permease protein [Escherichia coli HS] gi|169754672|gb|ACA77371.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|169889401|gb|ACB03108.1| predicted transporter subunit: membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|170519085|gb|ACB17263.1| L-cystine ABC transporter, permease protein [Escherichia coli SMS-3-5] gi|188489889|gb|EDU64992.1| L-cystine ABC transporter, permease protein [Escherichia coli 53638] gi|190901662|gb|EDV61418.1| L-cystine ABC transporter, permease protein [Escherichia coli B7A] gi|190906427|gb|EDV66036.1| L-cystine ABC transporter, permease protein [Escherichia coli F11] gi|192955527|gb|EDV86006.1| L-cystine ABC transporter, permease protein [Escherichia coli E110019] gi|194416807|gb|EDX32933.1| L-cystine ABC transporter, permease protein [Shigella dysenteriae 1012] gi|194421470|gb|EDX37484.1| L-cystine ABC transporter, permease protein [Escherichia coli 101-1] gi|209912599|dbj|BAG77673.1| putative amino acid ABC transporter permease component [Escherichia coli SE11] gi|218352257|emb|CAU98013.1| putative transporter subunit: permease component of ABC superfamily transporter [Escherichia coli 55989] gi|218361270|emb|CAQ98854.1| putative transporter subunit: permease component of ABC superfamily transporter [Escherichia coli IAI1] gi|218365545|emb|CAR03272.1| putative transporter subunit: permease component of ABC superfamily transporter [Escherichia coli S88] gi|218369504|emb|CAR17271.1| putative transporter subunit: permease component of ABC superfamily transporter [Escherichia coli IAI39] gi|218427475|emb|CAR08249.1| putative transporter subunit: permease component of ABC superfamily transporter [Escherichia coli ED1a] gi|218432510|emb|CAR13403.1| putative transporter subunit: permease component of ABC superfamily transporter [Escherichia coli UMN026] gi|222033659|emb|CAP76400.1| Inner membrane amino-acid ABC transporter permease [Escherichia coli LF82] gi|226900631|gb|EEH86890.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|227837228|gb|EEJ47694.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Escherichia coli 83972] gi|238863239|gb|ACR65237.1| predicted transporter subunit: membrane component of ABC superfamily [Escherichia coli BW2952] gi|253324173|gb|ACT28775.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|257754547|dbj|BAI26049.1| predicted transporter subunit [Escherichia coli O26:H11 str. 11368] gi|257764866|dbj|BAI36361.1| predicted transporter subunit [Escherichia coli O111:H- str. 11128] gi|260448965|gb|ACX39387.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli DH1] gi|281178980|dbj|BAI55310.1| putative amino acid ABC transporter permease component [Escherichia coli SE15] gi|281601360|gb|ADA74344.1| putative transport system permease protein [Shigella flexneri 2002017] gi|284921831|emb|CBG34904.1| putative cystine ABC transporter, permease protein [Escherichia coli 042] gi|291323130|gb|EFE62558.1| inner membrane amino-acid ABC transporter permease yecS [Escherichia coli B088] gi|291427612|gb|EFF00639.1| inner membrane amino-acid ABC transporter permease yecS [Escherichia coli FVEC1412] gi|291432877|gb|EFF05856.1| inner membrane amino-acid ABC transporter permease yecS [Escherichia coli B185] gi|291470745|gb|EFF13229.1| inner membrane amino-acid ABC transporter permease yecS [Escherichia coli B354] gi|294489589|gb|ADE88345.1| L-cystine ABC transporter, permease protein [Escherichia coli IHE3034] gi|298278490|gb|EFI20004.1| inner membrane amino-acid ABC transporter permease yecS [Escherichia coli FVEC1302] gi|299877725|gb|EFI85936.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|300307264|gb|EFJ61784.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|300316629|gb|EFJ66413.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|300357209|gb|EFJ73079.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|300403273|gb|EFJ86811.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|300406432|gb|EFJ89970.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|300415406|gb|EFJ98716.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|300418830|gb|EFK02141.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|300449217|gb|EFK12837.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300458913|gb|EFK22406.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|300463103|gb|EFK26596.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|300525193|gb|EFK46262.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|300528830|gb|EFK49892.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300839465|gb|EFK67225.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|300845752|gb|EFK73512.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|305852417|gb|EFM52868.1| putative transporter subunit [Escherichia coli NC101] gi|306906144|gb|EFN36662.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|307553932|gb|ADN46707.1| putative amino acid transport protein ABC superfamily [Escherichia coli ABU 83972] gi|307626605|gb|ADN70909.1| putative transporter subunit [Escherichia coli UM146] gi|308120422|gb|EFO57684.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|309702213|emb|CBJ01529.1| putative cystine ABC transporter, permease protein [Escherichia coli ETEC H10407] gi|312946510|gb|ADR27337.1| putative transporter subunit [Escherichia coli O83:H1 str. NRG 857C] gi|313650135|gb|EFS14548.1| L-cystine transport system permease protein tcyB [Shigella flexneri 2a str. 2457T] gi|315061218|gb|ADT75545.1| predicted transporter subunit: membrane component of ABC superfamily [Escherichia coli W] gi|315136555|dbj|BAJ43714.1| inner membrane amino-acid ABC transporter permease [Escherichia coli DH1] gi|315257251|gb|EFU37219.1| ABC transporter, permease protein [Escherichia coli MS 85-1] gi|315286628|gb|EFU46061.1| ABC transporter, permease protein [Escherichia coli MS 110-3] gi|315290284|gb|EFU49662.1| ABC transporter, permease protein [Escherichia coli MS 153-1] gi|315296501|gb|EFU55798.1| ABC transporter, permease protein [Escherichia coli MS 16-3] gi|315617859|gb|EFU98457.1| L-cystine transport system permease protein tcyB [Escherichia coli 3431] gi|320176078|gb|EFW51146.1| Cystine ABC transporter, permease protein [Shigella dysenteriae CDC 74-1112] gi|320178180|gb|EFW53157.1| Cystine ABC transporter, permease protein [Shigella boydii ATCC 9905] gi|320194370|gb|EFW69001.1| Cystine ABC transporter, permease protein [Escherichia coli WV_060327] gi|320198612|gb|EFW73212.1| Cystine ABC transporter, permease protein [Escherichia coli EC4100B] gi|323152749|gb|EFZ39021.1| L-cystine transport system permease protein tcyB [Escherichia coli EPECa14] gi|323165286|gb|EFZ51074.1| L-cystine transport system permease protein tcyB [Shigella sonnei 53G] gi|323180831|gb|EFZ66371.1| L-cystine transport system permease protein tcyB [Escherichia coli 1180] gi|323186306|gb|EFZ71656.1| L-cystine transport system permease protein tcyB [Escherichia coli 1357] gi|323378205|gb|ADX50473.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli KO11] gi|323937193|gb|EGB33473.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli E1520] gi|323940419|gb|EGB36610.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli E482] gi|323948201|gb|EGB44189.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli H120] gi|323952413|gb|EGB48286.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli H252] gi|323956315|gb|EGB52058.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli H263] gi|323961967|gb|EGB57566.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli H489] gi|323968335|gb|EGB63742.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli M863] gi|323972719|gb|EGB67920.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli TA007] gi|323977901|gb|EGB72987.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli TW10509] gi|324007277|gb|EGB76496.1| ABC transporter, permease protein [Escherichia coli MS 57-2] gi|324013510|gb|EGB82729.1| ABC transporter, permease protein [Escherichia coli MS 60-1] gi|324017954|gb|EGB87173.1| ABC transporter, permease protein [Escherichia coli MS 117-3] gi|324118972|gb|EGC12861.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli E1167] gi|327253049|gb|EGE64703.1| L-cystine transport system permease protein tcyB [Escherichia coli STEC_7v] gi|330911726|gb|EGH40236.1| cystine ABC transporter, permease protein [Escherichia coli AA86] gi|331043235|gb|EGI15373.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli M605] gi|331049423|gb|EGI21495.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli M718] gi|331056211|gb|EGI28220.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli TA206] gi|331059215|gb|EGI31192.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli TA143] gi|331063806|gb|EGI35717.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli TA271] gi|331069634|gb|EGI41021.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli TA280] gi|331074263|gb|EGI45583.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli H591] gi|331079685|gb|EGI50882.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli H299] gi|332089652|gb|EGI94754.1| L-cystine transport system permease protein tcyB [Shigella boydii 5216-82] gi|332095438|gb|EGJ00459.1| L-cystine transport system permease protein tcyB [Shigella dysenteriae 155-74] gi|332101263|gb|EGJ04609.1| L-cystine ABC transporter [Shigella sp. D9] gi|332343644|gb|AEE56978.1| L-cystine transport system permease TcyB [Escherichia coli UMNK88] gi|332756068|gb|EGJ86421.1| L-cystine transport system permease protein tcyB [Shigella flexneri 4343-70] gi|332757249|gb|EGJ87586.1| L-cystine transport system permease protein tcyB [Shigella flexneri 2747-71] gi|332757476|gb|EGJ87811.1| L-cystine transport system permease protein tcyB [Shigella flexneri K-671] gi|332766650|gb|EGJ96854.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella flexneri 2930-71] gi|333003006|gb|EGK22560.1| L-cystine transport system permease protein tcyB [Shigella flexneri VA-6] gi|333003318|gb|EGK22864.1| L-cystine transport system permease protein tcyB [Shigella flexneri K-218] gi|333017544|gb|EGK36856.1| L-cystine transport system permease protein tcyB [Shigella flexneri K-304] Length = 222 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 88/219 (40%), Positives = 135/219 (61%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFY 61 E L+IDS P LL A TL ++ L++GF +A++R+ I + + FY Sbjct: 3 ESIQLVIDSLPFLLKGA-GYTLQLSIGGMFFGLLLGFILALMRL---SPIWPVRWLARFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY +E +R++I SI KGQ Sbjct: 59 ISIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y I+ + +Q E+ + + Sbjct: 179 TSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQ 217 >gi|288934567|ref|YP_003438626.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|288889276|gb|ADC57594.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] Length = 222 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 87/217 (40%), Positives = 134/217 (61%), Gaps = 2/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E L+IDS P LL A V TL ++ L++GF +A++R+ + + Y+ Sbjct: 3 ESIQLVIDSAPFLLKGA-VFTLQLSIGGMFFGLVLGFVLALMRMS-PLWPVKWLARMYIS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY +E +R++I SI KGQW+ Sbjct: 61 IFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I S Sbjct: 121 AAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T + +Y + +Y ++ + +Q E+ + + Sbjct: 181 RTLEVFTMYLAASLIYWVMATVLSSLQNYFENQLNRQ 217 >gi|57650956|ref|YP_187214.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus COL] gi|161510604|ref|YP_001576263.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|258407433|ref|ZP_05680576.1| ABC amino acid transporter [Staphylococcus aureus A9763] gi|258422239|ref|ZP_05685151.1| amino acid ABC transporter [Staphylococcus aureus A9719] gi|294848955|ref|ZP_06789700.1| polar amino acid transport system permease [Staphylococcus aureus A9754] gi|295405100|ref|ZP_06814913.1| polar amino acid transport system permease [Staphylococcus aureus A8819] gi|297244157|ref|ZP_06928047.1| polar amino acid transport system permease [Staphylococcus aureus A8796] gi|57285142|gb|AAW37236.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus COL] gi|160369413|gb|ABX30384.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257840945|gb|EEV65396.1| ABC amino acid transporter [Staphylococcus aureus A9763] gi|257841670|gb|EEV66107.1| amino acid ABC transporter [Staphylococcus aureus A9719] gi|294824334|gb|EFG40758.1| polar amino acid transport system permease [Staphylococcus aureus A9754] gi|294970045|gb|EFG46063.1| polar amino acid transport system permease [Staphylococcus aureus A8819] gi|297178935|gb|EFH38180.1| polar amino acid transport system permease [Staphylococcus aureus A8796] Length = 242 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 94/211 (44%), Positives = 133/211 (63%), Gaps = 14/211 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++FV+ LII F A++RI S I+ I YV I RGTP+ Sbjct: 21 QAFGPMLEGLVKYSIPITLVTFVLGLIIALFTALMRISTSK-ILRSISRVYVSIIRGTPM 79 Query: 71 LVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G + + VA II L+LN AY SEIIR IISIPKG Sbjct: 80 IVQLFIIFYGIPELGRLLTNDADNQWTLAPVVAAIIGLSLNVGAYASEIIRGGIISIPKG 139 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+T QTI+ IILPQ I S L + F+S++K TS+ I + E+F+ AQ Sbjct: 140 QTEAAYSIGMTYGQTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQE 199 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + STTY+ L IY +A +Y ++ C+II I Sbjct: 200 VASTTYEYLTIYVLVALMYWVV---CFIISI 227 >gi|170024600|ref|YP_001721105.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|169751134|gb|ACA68652.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis YPIII] Length = 220 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 92/219 (42%), Positives = 140/219 (63%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFY 61 E L++DS P LL A + TL ++ + L++GF +A++R+ F+ SLI FY Sbjct: 3 ESMQLVLDSAPFLLKGAWL-TLQLSLGGMFLGLLLGFMLAMMRLSHFWP---FSLISRFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I SI KGQ Sbjct: 59 VSIFRGTPLIAQLFMIYYGLPQFGIELDPMPAALIGLSLNTAAYTSETLRAAISSIEKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+TR Q + +ILPQ T+ PL + FI ++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTRWQALYRVILPQAGRTALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y I+ + +Q ++E+ V + Sbjct: 179 TSRTMEVFTMYLAASLIYWIMATLLSALQSRLEAHVNRQ 217 >gi|15802353|ref|NP_288379.1| putative transport system permease protein (former yecC) [Escherichia coli O157:H7 EDL933] gi|15831910|ref|NP_310683.1| transport system permease protein [Escherichia coli O157:H7 str. Sakai] gi|168751844|ref|ZP_02776866.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|168758229|ref|ZP_02783236.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|168764460|ref|ZP_02789467.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|168771522|ref|ZP_02796529.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|168777342|ref|ZP_02802349.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|168783312|ref|ZP_02808319.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|168790326|ref|ZP_02815333.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|168802262|ref|ZP_02827269.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|195939222|ref|ZP_03084604.1| putative transport system permease protein [Escherichia coli O157:H7 str. EC4024] gi|208810409|ref|ZP_03252285.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208816908|ref|ZP_03258028.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208819783|ref|ZP_03260103.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209397535|ref|YP_002271032.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|217328790|ref|ZP_03444871.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. TW14588] gi|254793568|ref|YP_003078405.1| putative ABC transporter membrane protein [Escherichia coli O157:H7 str. TW14359] gi|261227587|ref|ZP_05941868.1| predicted transporter subunit: membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261255817|ref|ZP_05948350.1| predicted transporter subunit: membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK966] gi|291283095|ref|YP_003499913.1| putative transport system permease protein [Escherichia coli O55:H7 str. CB9615] gi|12516016|gb|AAG56933.1|AE005414_10 putative transport system permease protein (former yecC) [Escherichia coli O157:H7 str. EDL933] gi|13362124|dbj|BAB36079.1| putative transport system permease protein [Escherichia coli O157:H7 str. Sakai] gi|187767392|gb|EDU31236.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|188014175|gb|EDU52297.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|188999304|gb|EDU68290.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|189354909|gb|EDU73328.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|189359723|gb|EDU78142.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|189365552|gb|EDU83968.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|189370189|gb|EDU88605.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|189375708|gb|EDU94124.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|208724925|gb|EDZ74632.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208731251|gb|EDZ79940.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208739906|gb|EDZ87588.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209158935|gb|ACI36368.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|209767008|gb|ACI81816.1| putative transport system permease protein [Escherichia coli] gi|209767010|gb|ACI81817.1| putative transport system permease protein [Escherichia coli] gi|209767012|gb|ACI81818.1| putative transport system permease protein [Escherichia coli] gi|209767014|gb|ACI81819.1| putative transport system permease protein [Escherichia coli] gi|209767016|gb|ACI81820.1| putative transport system permease protein [Escherichia coli] gi|217318137|gb|EEC26564.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. TW14588] gi|254592968|gb|ACT72329.1| predicted transporter subunit: membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|290762968|gb|ADD56929.1| putative transport system permease protein [Escherichia coli O55:H7 str. CB9615] gi|320191893|gb|EFW66540.1| Cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC1212] gi|320641766|gb|EFX11154.1| amino acid ABC transporter permease [Escherichia coli O157:H7 str. G5101] gi|320647126|gb|EFX15959.1| amino acid ABC transporter permease [Escherichia coli O157:H- str. 493-89] gi|320652409|gb|EFX20707.1| amino acid ABC transporter permease [Escherichia coli O157:H- str. H 2687] gi|320658011|gb|EFX25773.1| amino acid ABC transporter permease [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658583|gb|EFX26277.1| amino acid ABC transporter permease [Escherichia coli O55:H7 str. USDA 5905] gi|320668481|gb|EFX35308.1| amino acid ABC transporter permease [Escherichia coli O157:H7 str. LSU-61] gi|326342326|gb|EGD66107.1| Cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. 1044] gi|326344833|gb|EGD68580.1| Cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. 1125] Length = 222 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 88/219 (40%), Positives = 135/219 (61%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFY 61 E L+IDS P LL A TL ++ L++GF +A++R+ I + + FY Sbjct: 3 ESIQLVIDSLPFLLKGA-GYTLQLSIGGMFFGLLLGFILALMRL---SPIWPVRWLARFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY +E +R++I SI KGQ Sbjct: 59 ISIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYTAETLRAAISSIDKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y I+ + +Q E+ + + Sbjct: 179 TSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQ 217 >gi|317009597|gb|ADU80177.1| amino acid ABC transporter, permease protein [Helicobacter pylori India7] Length = 237 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 86/217 (39%), Positives = 136/217 (62%), Gaps = 6/217 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIISLIM 58 E L++++F +L AA ++LP+A +SF++ L I +A+I+I F +++ + Sbjct: 19 ERLELLLEAFYPMLKAAFSISLPLAVVSFILGLFIAVMVALIKIAPPKHFIHKALLAGV- 77 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 +FYV + RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S +S+P Sbjct: 78 NFYVSLIRGTPLLVQIVVVFYGLPALGVYMDPIPAGIIAFSFNVGAYASETLRASFLSVP 137 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 K QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI E+F+ A Sbjct: 138 KDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIA 197 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q+ + +Y L IY E A +Y + +IQ ++E Sbjct: 198 QQKANASYDFLPIYLEAALIYWLFCLVLEVIQKRVEK 234 >gi|49487195|ref|YP_044416.1| transport system membrane protein [Staphylococcus aureus subsp. aureus MSSA476] gi|87160289|ref|YP_494993.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88196338|ref|YP_501160.1| amino acid ABC transporter permease [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268848|ref|YP_001247791.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus JH9] gi|150394922|ref|YP_001317597.1| polar amino acid ABC transporter inner membrane subunit [Staphylococcus aureus subsp. aureus JH1] gi|151222524|ref|YP_001333346.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus str. Newman] gi|221141309|ref|ZP_03565802.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253314750|ref|ZP_04837963.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253730086|ref|ZP_04864251.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253734171|ref|ZP_04868336.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH130] gi|255007187|ref|ZP_05145788.2| ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257794753|ref|ZP_05643732.1| amino acid ABC transporter [Staphylococcus aureus A9781] gi|258439631|ref|ZP_05690377.1| transport system membrane protein [Staphylococcus aureus A9299] gi|258442812|ref|ZP_05691372.1| ABC transporter [Staphylococcus aureus A8115] gi|258446488|ref|ZP_05694643.1| ABC transporter [Staphylococcus aureus A6300] gi|258450395|ref|ZP_05698487.1| transport system membrane protein [Staphylococcus aureus A6224] gi|258451282|ref|ZP_05699315.1| transport system membrane protein [Staphylococcus aureus A5948] gi|258455229|ref|ZP_05703189.1| amino acid ABC transporter [Staphylococcus aureus A5937] gi|269204045|ref|YP_003283314.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus ED98] gi|282893860|ref|ZP_06302092.1| polar amino acid transport system permease [Staphylococcus aureus A8117] gi|282920398|ref|ZP_06328121.1| polar amino acid transport system permease [Staphylococcus aureus A9765] gi|282928446|ref|ZP_06336047.1| ABC transporter ATP-binding protein [Staphylococcus aureus A10102] gi|284025433|ref|ZP_06379831.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus 132] gi|296276926|ref|ZP_06859433.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus MR1] gi|297209767|ref|ZP_06926163.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300910779|ref|ZP_07128229.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH70] gi|304379611|ref|ZP_07362344.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|49245638|emb|CAG44117.1| transport system membrane protein [Staphylococcus aureus subsp. aureus MSSA476] gi|87126263|gb|ABD20777.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203896|gb|ABD31706.1| amino acid ABC transproter, permease protein, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741917|gb|ABQ50215.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus JH9] gi|149947374|gb|ABR53310.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus JH1] gi|150375324|dbj|BAF68584.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus str. Newman] gi|253726173|gb|EES94902.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253727866|gb|EES96595.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH130] gi|257788725|gb|EEV27065.1| amino acid ABC transporter [Staphylococcus aureus A9781] gi|257847407|gb|EEV71409.1| transport system membrane protein [Staphylococcus aureus A9299] gi|257851933|gb|EEV75867.1| ABC transporter [Staphylococcus aureus A8115] gi|257854556|gb|EEV77504.1| ABC transporter [Staphylococcus aureus A6300] gi|257856487|gb|EEV79396.1| transport system membrane protein [Staphylococcus aureus A6224] gi|257861074|gb|EEV83889.1| transport system membrane protein [Staphylococcus aureus A5948] gi|257862440|gb|EEV85208.1| amino acid ABC transporter [Staphylococcus aureus A5937] gi|262076335|gb|ACY12308.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus ED98] gi|269941996|emb|CBI50408.1| transport system membrane protein [Staphylococcus aureus subsp. aureus TW20] gi|282589841|gb|EFB94925.1| ABC transporter ATP-binding protein [Staphylococcus aureus A10102] gi|282594344|gb|EFB99330.1| polar amino acid transport system permease [Staphylococcus aureus A9765] gi|282763918|gb|EFC04046.1| polar amino acid transport system permease [Staphylococcus aureus A8117] gi|296885440|gb|EFH24377.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|298695677|gb|ADI98899.1| ABC transporter permease [Staphylococcus aureus subsp. aureus ED133] gi|300887759|gb|EFK82954.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH70] gi|302334042|gb|ADL24235.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus JKD6159] gi|302752284|gb|ADL66461.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341787|gb|EFM07693.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312830759|emb|CBX35601.1| L-cystine transport system permease protein tcyB [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128573|gb|EFT84577.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus CGS03] gi|315197389|gb|EFU27726.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus CGS01] gi|320139119|gb|EFW31001.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus MRSA131] gi|320142504|gb|EFW34313.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus MRSA177] gi|323439639|gb|EGA97358.1| ABC transporter permease [Staphylococcus aureus O11] gi|323442696|gb|EGB00323.1| ABC transporter permease [Staphylococcus aureus O46] gi|329315099|gb|AEB89512.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus T0131] gi|329723591|gb|EGG60120.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 21172] gi|329726684|gb|EGG63145.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 21189] gi|329730323|gb|EGG66713.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 21193] Length = 239 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 94/211 (44%), Positives = 133/211 (63%), Gaps = 14/211 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++FV+ LII F A++RI S I+ I YV I RGTP+ Sbjct: 18 QAFGPMLEGLVKYSIPITLVTFVLGLIIALFTALMRISTSK-ILRSISRVYVSIIRGTPM 76 Query: 71 LVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G + + VA II L+LN AY SEIIR IISIPKG Sbjct: 77 IVQLFIIFYGIPELGRLLTNDADNQWTLAPVVAAIIGLSLNVGAYASEIIRGGIISIPKG 136 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+T QTI+ IILPQ I S L + F+S++K TS+ I + E+F+ AQ Sbjct: 137 QTEAAYSIGMTYGQTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQE 196 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + STTY+ L IY +A +Y ++ C+II I Sbjct: 197 VASTTYEYLTIYVLVALMYWVV---CFIISI 224 >gi|215487123|ref|YP_002329554.1| predicted transporter subunit: membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|312967119|ref|ZP_07781337.1| L-cystine transport system permease protein tcyB [Escherichia coli 2362-75] gi|215265195|emb|CAS09584.1| predicted transporter subunit: membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|312288583|gb|EFR16485.1| L-cystine transport system permease protein tcyB [Escherichia coli 2362-75] Length = 222 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 88/219 (40%), Positives = 135/219 (61%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFY 61 E L+IDS P LL A TL ++ L++GF +A++R+ I + + FY Sbjct: 3 ESIQLVIDSLPFLLKGA-GYTLQLSIGGMFFGLLLGFILALMRL---SPIWPVRWLARFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY +E +R++I SI KGQ Sbjct: 59 ISIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y I+ + +Q E+ + + Sbjct: 179 TSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQ 217 >gi|330816746|ref|YP_004360451.1| Amino acid ABC transporter, permease protein [Burkholderia gladioli BSR3] gi|327369139|gb|AEA60495.1| Amino acid ABC transporter, permease protein [Burkholderia gladioli BSR3] Length = 219 Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 85/204 (41%), Positives = 136/204 (66%), Gaps = 5/204 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L++DS P L A V+T+ A +S V L++ +A++ I + +++ I YV + R Sbjct: 5 SLLVDSLPVLAQGA-VLTVKFAVLSMVFGLVLAVVLALMGIA-RNRVLNAIARVYVSLMR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+FVI+YGLP +GI D A +I+L+ N +AY+SE +R +I+ I GQW ASY Sbjct: 63 GTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAILGIESGQWLASY 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ ++AQ I+++TY Sbjct: 123 SLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTY 182 Query: 187 QPLIIYCELAFVYLILTSFCYIIQ 210 QPL +Y A VY +L C +++ Sbjct: 183 QPLPLYLAAAAVYWVL---CQVLE 203 >gi|317182238|dbj|BAJ60022.1| amino acid ABC transporter permease [Helicobacter pylori F57] Length = 237 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 137/220 (62%), Gaps = 6/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIIS 55 + E L++++F +L AA ++LP+A ISF++ L I +A+I+I F +++ Sbjct: 16 LSKERLELLLEAFYPMLKAAFCISLPLAIISFILGLFIAVLVALIKIAPPKHFIHKALLA 75 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + +FYV + RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S + Sbjct: 76 GV-NFYVSLIRGTPLLVQIVVVFYGLPALGVYIDPIPAGIIAFSFNVGAYASETLRASFL 134 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+PK QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI E+F Sbjct: 135 SVPKDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVF 194 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + AQ+ + +Y L IY E A +Y + +IQ ++E Sbjct: 195 RIAQQKANASYDFLPIYLEAALIYWLFCLVLEVIQKRVEK 234 >gi|317014349|gb|ADU81785.1| amino acid ABC transporter, permease protein (yckJ) [Helicobacter pylori Gambia94/24] Length = 237 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 138/220 (62%), Gaps = 6/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIIS 55 + E L++++F +L AA ++LP+A ISF++ L+I +A+I+I F +++ Sbjct: 16 LSKERLELLLEAFYPMLKAAFCISLPLAVISFILGLLIAIVVALIKIAPPKRFIYRALLA 75 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + +FYV + RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S + Sbjct: 76 GV-NFYVSLIRGTPLLVQIVVVFYGLPALGVYMDPIPAGIIAFSFNVGAYASETLRASFL 134 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+PK QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI E+F Sbjct: 135 SVPKDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVF 194 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + AQ+ + +Y L IY E A +Y + +IQ ++E Sbjct: 195 RIAQQKANASYDFLPIYLEAALIYWLFCLVLEVIQKRVEK 234 >gi|308062254|gb|ADO04142.1| amino acid ABC transporter, permease protein [Helicobacter pylori Cuz20] gi|317177726|dbj|BAJ55515.1| amino acid ABC transporter permease [Helicobacter pylori F16] Length = 240 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 137/220 (62%), Gaps = 6/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIIS 55 + E L++++F +L AA ++LP+A ISF++ L I +A+I+I F +++ Sbjct: 19 LSKERLELLLEAFYPMLKAAFCISLPLAIISFILGLFIAVLVALIKIAPPKHFIHKALLA 78 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + +FYV + RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S + Sbjct: 79 GV-NFYVSLIRGTPLLVQIVVVFYGLPALGVYIDPIPAGIIAFSFNVGAYASETLRASFL 137 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+PK QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI E+F Sbjct: 138 SVPKDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVF 197 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + AQ+ + +Y L IY E A +Y + +IQ ++E Sbjct: 198 RIAQQKANASYDFLPIYLEAALIYWLFCLVLEVIQKRVEK 237 >gi|254779537|ref|YP_003057643.1| ABC-type transport system, permease; putative membrane protein [Helicobacter pylori B38] gi|254001449|emb|CAX29449.1| ABC-type transport system, permease; putative membrane protein [Helicobacter pylori B38] Length = 229 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 87/217 (40%), Positives = 135/217 (62%), Gaps = 6/217 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIISLIM 58 E L++++F +L AA ++LP+A ISF++ L I +A+I+I F +++ + Sbjct: 11 ERLELLLEAFYPMLKAAFCISLPLAIISFILGLFIAIMVALIKIAPPKHFMHKALLAGV- 69 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 +FYV I RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S +S+P Sbjct: 70 NFYVSIIRGTPLLVQIVVVFYGLPALGVYMDPIPAGIIAFSFNVGAYASETLRASFLSVP 129 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 K QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI E+F+ A Sbjct: 130 KDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIA 189 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q+ + +Y L IY E A +Y + +Q ++E Sbjct: 190 QQKANASYDFLPIYLEAALIYWLFCLVLEAVQKRVEK 226 >gi|307637630|gb|ADN80080.1| Putative ABC-type amino-acid transporter [Helicobacter pylori 908] gi|325996224|gb|ADZ51629.1| Putative ABC-type amino-acid transporter permease protein [Helicobacter pylori 2018] gi|325997818|gb|ADZ50026.1| Putative amino-acid ABC transporter permease protein [Helicobacter pylori 2017] Length = 240 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 86/217 (39%), Positives = 136/217 (62%), Gaps = 6/217 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIISLIM 58 E L++++F +L AA ++LP+A SF++ L+I +A+I+I F +++ + Sbjct: 22 ERLELLLEAFYPMLKAAFCISLPLAITSFILGLLIAIVVALIKIAPPKHFMHKALLAGV- 80 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 +FYV + RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S +S+P Sbjct: 81 NFYVSLIRGTPLLVQIVVVFYGLPALGVYMDPIPAGIIAFSFNVGAYASETLRASFLSVP 140 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 K QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI E+F+ A Sbjct: 141 KDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIA 200 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q+ + +Y L IY E A +Y + +IQ ++E Sbjct: 201 QQKANASYDFLPIYLEAALIYWLFCLVLEVIQKRVEK 237 >gi|320330785|gb|EFW86759.1| cystine ABC transporter, permease protein, putative [Pseudomonas syringae pv. glycinea str. race 4] Length = 222 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 75/168 (44%), Positives = 114/168 (67%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +++ I YV RGTPLLVQLFVI+YGLP +GI + A +I +LN +AY EI+R+ Sbjct: 51 LVNWIARIYVSFLRGTPLLVQLFVIYYGLPEMGIQLEPLSAALIGFSLNMAAYACEILRA 110 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I S+ +GQW+A+ +IG+TR QT+R ILPQ T+ PL + FIS++K T++A+TI +P Sbjct: 111 AISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNSFISLVKDTALAATIQVP 170 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E+F+ AQ I + T++ +Y A +Y IL + +Q K+E+ V +H Sbjct: 171 ELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEARVNRH 218 >gi|82752008|ref|YP_417749.1| ABC transporter permease [Staphylococcus aureus RF122] gi|82657539|emb|CAI81982.1| ABC transporter permease [Staphylococcus aureus RF122] Length = 239 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 93/211 (44%), Positives = 133/211 (63%), Gaps = 14/211 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++FV+ LII F A++RI S I+ I YV I RGTP+ Sbjct: 18 QAFGPMLEGLVKYSIPITLVTFVLGLIIALFTALMRISTSK-ILRSISRVYVSIIRGTPM 76 Query: 71 LVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G + + VA II L+LN AY SEIIR IISIPKG Sbjct: 77 IVQLFIIFYGIPELGRLLTNDADNQWTLAPVVAAIIGLSLNVGAYASEIIRGGIISIPKG 136 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+T QTI+ IILPQ I S L + F+S++K TS+ I + E+F+ AQ Sbjct: 137 QTEAAYSIGMTYGQTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQE 196 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + STTY+ L IY +A +Y ++ C+I+ I Sbjct: 197 VASTTYEYLTIYVLVALMYWVV---CFIMSI 224 >gi|282932376|ref|ZP_06337807.1| L-cystine transport system permease protein TcyB [Lactobacillus jensenii 208-1] gi|297206408|ref|ZP_06923803.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus jensenii JV-V16] gi|281303490|gb|EFA95661.1| L-cystine transport system permease protein TcyB [Lactobacillus jensenii 208-1] gi|297149534|gb|EFH29832.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus jensenii JV-V16] Length = 225 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 93/210 (44%), Positives = 138/210 (65%), Gaps = 12/210 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF------FSDTIISLIMH 59 + +I S P++L A + T+PIA ISF++ +II A+IR+ ++ L+ Sbjct: 2 WEIIKTSVPEILIAGLKYTIPIAIISFILGIIIASITALIRMSTPKGNPLKKSLWQLLKG 61 Query: 60 F---YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 F YVWIFR TPLLVQLF++FYGLP IGI ++ A I++ +LN AY SE IR+SI S Sbjct: 62 FFTFYVWIFRSTPLLVQLFIVFYGLPSIGIQLGAWTAGILTFSLNTGAYASETIRASISS 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+ QW+A+Y+IGLT ++ + +I PQ + + PLS+ FI ++K TS+AS+IT+ E+F Sbjct: 122 VPQDQWEAAYSIGLTYRKVLSRVIFPQAVRIAIPPLSNSFIGLVKDTSLASSITLVEMFM 181 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFC 206 +Q I S YQP+I+Y +A +Y I FC Sbjct: 182 VSQEIASHNYQPMIMYSIVAIIYAI---FC 208 >gi|219872122|ref|YP_002476497.1| amino acid ABC transporter permease [Haemophilus parasuis SH0165] gi|219692326|gb|ACL33549.1| ABC-type amino acid transport system, permease component [Haemophilus parasuis SH0165] Length = 212 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 83/209 (39%), Positives = 131/209 (62%), Gaps = 4/209 (1%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII-SLIMHF---YVWIFRGTPLL 71 ++ AA +V++P+A SF+I + I +A++R+ ++ L++ F Y+ I RGTP+L Sbjct: 1 MVQAAFLVSIPLAIASFIIGMAIAVGVALVRVTSVNSAFHRLLLWFVKGYISIIRGTPML 60 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 VQ+ ++FYGLP IGI D A II ++N AY SE IR++I+S+PKGQW+A Y IG+T Sbjct: 61 VQICIVFYGLPAIGIFIDPIPAAIIGFSINIGAYGSETIRAAILSVPKGQWEAGYTIGMT 120 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 QT R II PQ + PLS+ FI + K TS+AS +T+ E+F+ AQ++ + +Y L + Sbjct: 121 YMQTFRRIIAPQAFRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQVANMSYDFLPV 180 Query: 192 YCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y E +Y + IQ ++E ++ Sbjct: 181 YIEAGLIYWCFCWVLFFIQARLEKRFDRY 209 >gi|167646871|ref|YP_001684534.1| polar amino acid ABC transporter inner membrane subunit [Caulobacter sp. K31] gi|167349301|gb|ABZ72036.1| polar amino acid ABC transporter, inner membrane subunit [Caulobacter sp. K31] Length = 218 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 86/215 (40%), Positives = 133/215 (61%), Gaps = 2/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +LI+ S P LL A L ++ I + L+IGF +A++R+ S ++ YV Sbjct: 5 LDLIVQSAPLLLKGAGYTVL-LSLIGMGVGLVIGFGLALMRLSRSP-LLRWPAAIYVSAI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+I+YGLP +G+ +A I ++N AY EI+RS+I ++ KGQW+A+ Sbjct: 63 RGTPLLVQLFLIYYGLPQLGVQLPPLLAAGIGFSINIGAYAGEILRSAIAAVDKGQWEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +G++R Q +R +ILPQ T+ PLS+ FIS++K TS+A+TI +PE+F+ AQ I + T Sbjct: 123 SVLGMSRGQALRRVILPQAARTAVAPLSNSFISLVKDTSLAATIQVPELFRQAQLITART 182 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y+ +Y A +Y IL+S + Q ++E Sbjct: 183 YEIFAMYLAAAALYWILSSVLALGQARLERQAEGR 217 >gi|301645563|ref|ZP_07245493.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|307138585|ref|ZP_07497941.1| putative transporter subunit [Escherichia coli H736] gi|331642540|ref|ZP_08343675.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli H736] gi|301076172|gb|EFK90978.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|331039338|gb|EGI11558.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli H736] Length = 222 Score = 161 bits (408), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 88/219 (40%), Positives = 134/219 (61%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFY 61 E L+IDS P LL A TL ++ L++GF +A++R+ I + + FY Sbjct: 3 ESIQLVIDSLPFLLKGA-GYTLQLSIGGMFFGLLLGFILALMRL---SPIWPVRWLARFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY +E +R++I SI KGQ Sbjct: 59 ISIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T +Y + +Y I+ + +Q E+ + + Sbjct: 179 TSRTLDVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQ 217 >gi|108563347|ref|YP_627663.1| amino acid ABC transporter, permease protein [Helicobacter pylori HPAG1] gi|107837120|gb|ABF84989.1| amino acid ABC transporter, permease protein [Helicobacter pylori HPAG1] Length = 237 Score = 161 bits (408), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 86/213 (40%), Positives = 136/213 (63%), Gaps = 9/213 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIISLIM 58 E L++++F +L AA ++LP+A ISF++ L I +A+I+I F +++ + Sbjct: 19 ERLELLLEAFYPMLKAAFCISLPLAIISFILGLFIAVMVALIKIAPPKHFMHKALLAGV- 77 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 +FYV + RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S +S+P Sbjct: 78 NFYVSLIRGTPLLVQIVVVFYGLPALGVYIDPIPAGIIAFSFNVGAYASETLRASFLSVP 137 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 K QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI E+F+ A Sbjct: 138 KDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIA 197 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 Q+ + +Y L IY E A +Y + FC ++++ Sbjct: 198 QQKANASYDFLPIYLEAALIYWL---FCLVLEV 227 >gi|146307036|ref|YP_001187501.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina ymp] gi|145575237|gb|ABP84769.1| Diaminopimelate ABC transporter membrane protein / L-cystine ABC transporter membrane protein [Pseudomonas mendocina ymp] Length = 222 Score = 161 bits (408), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 74/162 (45%), Positives = 110/162 (67%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 FYV FRGTPLLVQLF+I+YGLP +GI D A +I +LN +AY SEI+R++I SI Sbjct: 57 RFYVSFFRGTPLLVQLFLIYYGLPQLGIQLDPLPAALIGFSLNMAAYTSEILRAAIASID 116 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW+A+ +IG+++ QT+ ILPQ T+ PL + FIS++K T++A+TI +PE+F+ A Sbjct: 117 RGQWEAAASIGMSKAQTLYRAILPQAARTALPPLGNSFISLVKDTALAATIQVPELFRQA 176 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Q I + T++ +Y A +Y L S Q ++E+ V +H Sbjct: 177 QLITARTFEIFTMYLAAALIYWALASVLAHFQARLEARVNRH 218 >gi|315586883|gb|ADU41264.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Helicobacter pylori 35A] gi|317178711|dbj|BAJ56499.1| amino acid ABC transporter permease [Helicobacter pylori F30] Length = 240 Score = 161 bits (408), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 137/220 (62%), Gaps = 6/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIIS 55 + E L++++F +L AA ++LP+A ISF++ L I +A+I+I F +++ Sbjct: 19 LSKERLELLLEAFYPMLKAAFCISLPLAFISFILGLFIAVLVALIKIAPPKHFIHKALLT 78 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + +FYV + RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S + Sbjct: 79 GV-NFYVSLIRGTPLLVQIVVVFYGLPTLGVYIDPIPAGIIAFSFNVGAYASETLRASFL 137 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+PK QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI E+F Sbjct: 138 SVPKDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVF 197 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + AQ+ + +Y L IY E A +Y + +IQ ++E Sbjct: 198 RIAQQKANASYDFLPIYLEAALIYWLFCLVLEVIQKRVEK 237 >gi|172063792|ref|YP_001811443.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171996309|gb|ACB67227.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 219 Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 83/215 (38%), Positives = 142/215 (66%), Gaps = 2/215 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E F+L+I + P ++ A++ TL A S + L++G +A++RI S+ + S + YV Sbjct: 2 EAFDLVIHTLPVMVRGALL-TLKFAVASMALGLVVGLVVAIMRIG-SNRLASGLAQGYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQ+FV++YGLP +GI D A I +LTLN AY+SE +R +I+ I +GQW Sbjct: 60 LMRGTPLLVQMFVVYYGLPDLGITLDPTTAGIFTLTLNAGAYLSESMRGAILGIGRGQWA 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A++++GLT QT+R+I+ PQ + + L + IS++K TS+ S IT+ E+ ++ Q +++ Sbjct: 120 AAHSLGLTHVQTLRYIVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIA 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 T+QPL +Y A +Y +L++ +Q ++E+ ++ Sbjct: 180 ATFQPLPLYLAAAALYWVLSTLLTRLQGRVETRLS 214 >gi|109947816|ref|YP_665044.1| ABC-type amino-acid transport, permease component [Helicobacter acinonychis str. Sheeba] gi|109715037|emb|CAK00045.1| ABC-type amino-acid transport, permease component [Helicobacter acinonychis str. Sheeba] Length = 231 Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 91/223 (40%), Positives = 139/223 (62%), Gaps = 8/223 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM-- 58 + E L++++F +L AA ++LP+A ISF++ L + +A+I+I +I + Sbjct: 10 LSKERLELLLEAFYPMLKAAFCISLPLAIISFILGLWLAIVVALIKIASPKRLIHRALLA 69 Query: 59 --HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +FYV I RGTPLLVQ+ V+FYGLP +G+ D A II+ +LN AY SE +R+S +S Sbjct: 70 GVNFYVSIIRGTPLLVQIVVVFYGLPALGVYIDPIPAGIIAFSLNVGAYASETLRASFLS 129 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPK QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI EIF+ Sbjct: 130 IPKDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEIFR 189 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 AQ+ + +Y L IY E A +Y + FC ++ +I+ V + Sbjct: 190 IAQQKANASYDFLPIYLEAALIYWL---FCLALE-RIQKHVEK 228 >gi|116670891|ref|YP_831824.1| polar amino acid ABC transporter inner membrane subunit [Arthrobacter sp. FB24] gi|116611000|gb|ABK03724.1| amino acid ABC transporter membrane protein, PAAT family [Arthrobacter sp. FB24] Length = 221 Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 84/223 (37%), Positives = 144/223 (64%), Gaps = 6/223 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M W +L+ +S +L AI T+P+A SF + L++ +A++R+ + ++S Sbjct: 1 MNINW-DLVWNSLGPILIGAITGTIPLALASFGLGLLLALLVALMRLS-RNPVLSAAARM 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + RGTPLLVQLFVIFYGLP +G+ + + II+ +LN Y +E+IR++I+S+PKG Sbjct: 59 YISVIRGTPLLVQLFVIFYGLPSVGVTISPWPSAIIAFSLNVGGYAAEVIRAAILSVPKG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A + IG++R+Q++ IILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ+ Sbjct: 119 QWEAGHTIGMSRRQSLVRIILPQAARVSVPPLSNTFISLVKDTSLASLILVTELFRQAQQ 178 Query: 181 IVSTTYQPLIIYCELAFVY----LILTSFCYIIQIKIESSVTQ 219 + + + + +++Y E A +Y L+L +++ +++ V Sbjct: 179 VAAFSQEFMLLYLEAAVIYWIICLVLAGGQSVLEKRLDRYVAH 221 >gi|209515705|ref|ZP_03264569.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209503941|gb|EEA03933.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 219 Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 85/204 (41%), Positives = 136/204 (66%), Gaps = 5/204 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L++ S P L A++ T+ A +S + L+ G +A++ I S + + I YV + R Sbjct: 5 SLLLQSLPVLAQGALL-TIKFAILSMIFGLVGGAVLALMGISHSRPL-NWIARVYVSVMR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+FVI+YGLP GI D A +I+L+ N +AY+SE +R +I+ I +GQW ASY Sbjct: 63 GTPLLVQIFVIYYGLPSFGISLDPTPAGVIALSANVAAYLSESMRGAILGIHQGQWLASY 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+R+QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ ++AQ I+++TY Sbjct: 123 SLGLSRRQTLRYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTY 182 Query: 187 QPLIIYCELAFVYLILTSFCYIIQ 210 QPL +Y A VY +L C +++ Sbjct: 183 QPLPLYLAAAAVYWVL---CQVLE 203 >gi|301018232|ref|ZP_07182747.1| ABC transporter, permease protein [Escherichia coli MS 69-1] gi|300399819|gb|EFJ83357.1| ABC transporter, permease protein [Escherichia coli MS 69-1] Length = 222 Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 88/219 (40%), Positives = 135/219 (61%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFY 61 E L+IDS P LL A TL ++ L++GF +A++R+ I + + FY Sbjct: 3 ESIQLVIDSLPFLLKGA-GYTLQLSIGGMFFCLLLGFILALMRL---SPIWPVRWLARFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY +E +R++I SI KGQ Sbjct: 59 ISIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y I+ + +Q E+ + + Sbjct: 179 TSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQ 217 >gi|255528435|ref|ZP_05395231.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] gi|296188320|ref|ZP_06856712.1| putative ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Clostridium carboxidivorans P7] gi|255507869|gb|EET84313.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] gi|296047446|gb|EFG86888.1| putative ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Clostridium carboxidivorans P7] Length = 215 Score = 161 bits (407), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 83/198 (41%), Positives = 132/198 (66%), Gaps = 2/198 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +II P LL + V+T+ + I+ V+ I+G F+A++++ + + +I FY WIFR Sbjct: 4 GIIIKVLPILLKGS-VMTIELTVIALVVGTILGVFLALLKLS-KNVVFRIISSFYTWIFR 61 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QLF +YGLP +G+ F A I L+LN AY++EIIR I SI KGQ++A+ Sbjct: 62 GTPLLLQLFFFYYGLPFMGVELTPFSAAAIGLSLNCGAYMAEIIRGGIQSIDKGQFEAAK 121 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G T T++ IILPQT P+ +EFI++LK TS+ STI + E+ ++AQ+I ++T+ Sbjct: 122 ALGFTYADTMKKIILPQTFKVIIPPVGNEFIALLKDTSLVSTIAMVELMRSAQQIYASTF 181 Query: 187 QPLIIYCELAFVYLILTS 204 +P+ ++ +YL+LT+ Sbjct: 182 RPIEVFFTAGILYLLLTT 199 >gi|317180216|dbj|BAJ58002.1| amino acid ABC transporter permease [Helicobacter pylori F32] Length = 240 Score = 161 bits (407), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 86/216 (39%), Positives = 137/216 (63%), Gaps = 9/216 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIIS 55 + E L++++F +L AA ++LP+A ISF++ L I +A+I+I F +++ Sbjct: 19 LSKERLELLLEAFYPMLKAAFCISLPLAIISFILGLFIAVLVALIKIAPPKHFIHKALLA 78 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + +FYV + RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S + Sbjct: 79 GV-NFYVSLIRGTPLLVQIVVVFYGLPALGVYIDPIPAGIIAFSFNVGAYASETLRASFL 137 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+PK QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI E+F Sbjct: 138 SVPKDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVF 197 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + AQ+ + +Y L IY E A +Y + FC ++++ Sbjct: 198 RIAQQKANASYDFLPIYLEAALIYWL---FCLVLEV 230 >gi|282917762|ref|ZP_06325512.1| polar amino acid transport system permease [Staphylococcus aureus subsp. aureus D139] gi|283767496|ref|ZP_06340411.1| polar amino acid transport system permease [Staphylococcus aureus subsp. aureus H19] gi|282318047|gb|EFB48407.1| polar amino acid transport system permease [Staphylococcus aureus subsp. aureus D139] gi|283461375|gb|EFC08459.1| polar amino acid transport system permease [Staphylococcus aureus subsp. aureus H19] Length = 239 Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 93/211 (44%), Positives = 132/211 (62%), Gaps = 14/211 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++F + LII F A++RI S I+ I YV I RGTP+ Sbjct: 18 QAFGPMLEGLVKYSIPITLVTFALGLIIALFTALMRISTSK-ILRSISRVYVSIIRGTPM 76 Query: 71 LVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G + + VA II L+LN AY SEIIR IISIPKG Sbjct: 77 IVQLFIIFYGIPELGRLLTNDADNQWTLAPVVAAIIGLSLNVGAYASEIIRGGIISIPKG 136 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+T QTI+ IILPQ I S L + F+S++K TS+ I + E+F+ AQ Sbjct: 137 QTEAAYSIGMTYGQTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQE 196 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + STTY+ L IY +A +Y ++ C+II I Sbjct: 197 VASTTYEYLTIYVLVALMYWVV---CFIISI 224 >gi|295676370|ref|YP_003604894.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] gi|295436213|gb|ADG15383.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 219 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 84/204 (41%), Positives = 137/204 (67%), Gaps = 5/204 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L+++S P L A++ T+ A +S + LI G +A++ I S + + I YV + R Sbjct: 5 SLLLESLPVLAQGALL-TIKFAILSMIFGLIGGAMLALMGISHSRPL-NWIARVYVSVMR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+FVI+YGLP GI + A +I+L+ N +AY+SE +R +I+ I +GQW ASY Sbjct: 63 GTPLLVQIFVIYYGLPSFGISLEPTPAGVIALSANVAAYLSESMRGAILGIHQGQWLASY 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+R+QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ ++AQ ++++TY Sbjct: 123 SLGLSRRQTLRYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEMIASTY 182 Query: 187 QPLIIYCELAFVYLILTSFCYIIQ 210 QPL +Y A VY +L C +++ Sbjct: 183 QPLPLYLAAAAVYWVL---CQVLE 203 >gi|238027538|ref|YP_002911769.1| amino acid ABC transporter permease [Burkholderia glumae BGR1] gi|237876732|gb|ACR29065.1| Amino acid ABC transporter, permease protein [Burkholderia glumae BGR1] Length = 219 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 88/204 (43%), Positives = 134/204 (65%), Gaps = 5/204 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L++DS P L A V+T+ A +S V LI +A++ I S +++ I YV + R Sbjct: 5 SLLVDSLPVLAQGA-VLTVKFAVLSMVFGLIAAVVLALMGIAHSR-VLNAIARVYVSLMR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+FVI+YGLP +GI D A +I+L+ N +AY+SE +R +I I GQW ASY Sbjct: 63 GTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAINGIESGQWLASY 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ ++AQ I+++TY Sbjct: 123 SLGLSWSQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTY 182 Query: 187 QPLIIYCELAFVYLILTSFCYIIQ 210 QPL +Y A VY +L C I++ Sbjct: 183 QPLPLYLAAAAVYWVL---CQILE 203 >gi|161502926|ref|YP_001570038.1| hypothetical protein SARI_00985 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864273|gb|ABX20896.1| hypothetical protein SARI_00985 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 222 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 86/217 (39%), Positives = 134/217 (61%), Gaps = 2/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E L+I+S P LL A V TL ++ L++GF +A++R+ + + FY+ Sbjct: 3 ESIQLVIESLPYLLKGA-VFTLQLSIGGMFFGLLLGFVLALMRMS-PLWPVRWLARFYIS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I +I KGQW+ Sbjct: 61 IFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISAIDKGQWE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+T QT+ ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I S Sbjct: 121 AAASIGMTPWQTLHRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T + +Y + +Y ++ + +Q E+ + + Sbjct: 181 RTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQ 217 >gi|296138522|ref|YP_003645765.1| polar amino acid ABC transporter inner membrane subunit [Tsukamurella paurometabola DSM 20162] gi|296026656|gb|ADG77426.1| polar amino acid ABC transporter, inner membrane subunit [Tsukamurella paurometabola DSM 20162] Length = 483 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 79/210 (37%), Positives = 129/210 (61%), Gaps = 1/210 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++++ + + A + T+P+ ISFVI L I +A+ R+ + L Y+ I Sbjct: 267 WDMVRRNLVPMAKATVTTTIPLTAISFVIGLAIALGVALARMSKRRAVRGL-ARAYISII 325 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQL +IFYGLP G+V D F+A ++ +LN Y +EIIR++I ++P+GQW+A+ Sbjct: 326 RGTPLLVQLVIIFYGLPLAGVVIDPFLAAAVAFSLNVGGYAAEIIRAAIGAVPRGQWEAA 385 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 IG+ + +R IILPQ T+ PL++ +S+LK TS+AS I + E+F+TAQ + T Sbjct: 386 TTIGMDYRTALRRIILPQAARTATPPLANTLVSLLKDTSLASAILVTELFRTAQIAAAPT 445 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Y ++Y A Y ++ ++Q ++E+ Sbjct: 446 YDFFVMYVVAACYYWVICQVLSLVQTRLET 475 >gi|261838312|gb|ACX98078.1| amino acid ABC transporter, permease protein [Helicobacter pylori 51] Length = 237 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 87/219 (39%), Positives = 136/219 (62%), Gaps = 4/219 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISL 56 + E L++++F +L AA ++LP+A ISF++ L I +A+I+I F + + Sbjct: 16 LSKERLELLLEAFYPMLKAAFCISLPLAIISFILGLFIAVLVALIKIAPPKHFIHKALLV 75 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++FYV + RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S +S Sbjct: 76 GVNFYVSLIRGTPLLVQIVVVFYGLPALGVYIDPIPAGIIAFSFNVGAYASETLRASFLS 135 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +PK QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI E+F+ Sbjct: 136 VPKDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNIFISLFKETSLASVVTIAEVFR 195 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 AQ+ + +Y L IY E A +Y + +IQ ++E Sbjct: 196 IAQQKANASYDFLPIYLEAALIYWLFCLVLEVIQKRVEK 234 >gi|332673778|gb|AEE70595.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Helicobacter pylori 83] Length = 237 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 136/220 (61%), Gaps = 6/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIIS 55 + E L++++F +L AA ++LP+A ISF++ L I +A+I+I F +++ Sbjct: 16 LSKERLELLLEAFYPMLKAAFCISLPLAIISFILGLFIAVLVALIKIVPPKHFIHKALLA 75 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + +FYV + RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S + Sbjct: 76 GV-NFYVSLIRGTPLLVQIVVVFYGLPALGVYIDPIPAGIIAFSFNVGAYASETLRASFL 134 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+PK QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI E+F Sbjct: 135 SVPKDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVF 194 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + AQ+ + +Y L IY E A +Y + IQ ++E Sbjct: 195 RIAQQKANASYDFLPIYLEAALIYWLFCLVLEAIQKRVEK 234 >gi|170699412|ref|ZP_02890457.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170135668|gb|EDT03951.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 219 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 142/215 (66%), Gaps = 2/215 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E +L+I + P ++ A++ TL A S + L++G +A++RI S+ ++S + YV Sbjct: 2 EALDLVIHTLPVMVKGALL-TLKFAVASMALGLVVGLVVAIMRIG-SNRLVSGLAQGYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQ+FV++YGLP +GI D A I +LTLN AY+SE +R +I+ I +GQW Sbjct: 60 LMRGTPLLVQMFVVYYGLPDLGITLDPTTAGIFTLTLNAGAYLSESMRGAILGIGRGQWA 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A++++GLT QT+R+I+ PQ + + L + IS++K TS+ S IT+ E+ ++ Q +++ Sbjct: 120 AAHSLGLTHVQTLRYIVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIA 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 T+QPL +Y A +Y +L++ +Q ++E+ ++ Sbjct: 180 ATFQPLPLYLAAAALYWVLSTLLTRLQGRVETRLS 214 >gi|187731045|ref|YP_001879707.1| L-cystine ABC transporter permease [Shigella boydii CDC 3083-94] gi|187428037|gb|ACD07311.1| L-cystine ABC transporter, permease protein [Shigella boydii CDC 3083-94] Length = 222 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 88/219 (40%), Positives = 134/219 (61%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFY 61 E L+IDS P LL A TL ++ L++GF +A++R+ I + + FY Sbjct: 3 ESIQLVIDSLPFLLKGA-GYTLQLSIGGMFFGLLLGFILALMRL---SPIWPVRWLARFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY +E +R++I SI KGQ Sbjct: 59 ISIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R ILPQ PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQTMRRAILPQAARVVLPPLSNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y I+ + +Q E+ + + Sbjct: 179 TSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQ 217 >gi|221317432|ref|ZP_03598726.1| hypothetical protein BsubsJ_02043 [Bacillus subtilis subsp. subtilis str. JH642] Length = 234 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 89/216 (41%), Positives = 133/216 (61%), Gaps = 2/216 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +NL+ SF +L I T+P+ +SF+ +I+ A+ R+ + + YV Sbjct: 17 WNLVQQSFWPILSGGIYYTIPLTILSFIFGMILALITALARMS-KVRPLRWVFSVYVSAI 75 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+IFY P + D F + +I+ +LN AY SEIIR+SI+S+PKGQW+A Sbjct: 76 RGTPLLVQLFIIFYLFPAFNVTLDPFPSAVIAFSLNVGAYASEIIRASILSVPKGQWEAG 135 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y IG+T ++T+ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 136 YTIGMTHQKTLFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGARN 195 Query: 186 Y-QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Q L+IY E AF+Y I+ ++Q IE + ++ Sbjct: 196 LDQILVIYIEAAFIYWIICFLLSLVQHVIERRLDRY 231 >gi|333004176|gb|EGK23708.1| L-cystine transport system permease protein tcyB [Shigella flexneri K-272] Length = 222 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 88/219 (40%), Positives = 135/219 (61%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFY 61 E L+IDS P LL A TL ++ L++GF +A++R+ I + + FY Sbjct: 3 ESIQLVIDSLPFLLKGA-GYTLQLSIGGMFFGLLLGFILALMRL---SPIWPVRWLACFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY +E +R++I SI KGQ Sbjct: 59 ISIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y I+ + +Q E+ + + Sbjct: 179 TSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQ 217 >gi|330873993|gb|EGH08142.1| amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 222 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 75/168 (44%), Positives = 114/168 (67%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +++ I YV FRGTPLLVQLFVI+YGLP +GI + A +I +LN +AY EI+R+ Sbjct: 51 LVNWIARIYVSFFRGTPLLVQLFVIYYGLPELGIQLEPLSAALIGFSLNMAAYACEILRA 110 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I S+ +GQW+A+ +IG+TR QT+R ILPQ T+ L + FIS++K T++A+TI +P Sbjct: 111 AIGSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPSLGNSFISLVKDTALAATIQVP 170 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E+F+ AQ I + T++ +Y A +Y IL + +Q K+E+ V +H Sbjct: 171 ELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEARVNRH 218 >gi|73661552|ref|YP_300333.1| amino acid ABC transporter permease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494067|dbj|BAE17388.1| ABC-type amino acid transport system permease component [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 239 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 88/211 (41%), Positives = 133/211 (63%), Gaps = 14/211 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++F++ L+I A++RI S I+ I FY+ I RGTP+ Sbjct: 18 QAFAPMLEGLVKFSIPITLVTFLLGLVIALLTALMRISTSR-ILRGIARFYISIIRGTPM 76 Query: 71 LVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G + + +A II L+LN AY SEIIR I+SIPKG Sbjct: 77 IVQLFIIFYGIPELGRLLTNNSENQWTLAPVIAAIIGLSLNVGAYASEIIRGGIMSIPKG 136 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+ +QTI+ IILPQ I S L + F+S++K TS+ I + E+F+ AQ Sbjct: 137 QTEAAYSIGMNYRQTIQRIILPQAIRVSVPALGNTFLSLIKDTSLLGFILVAEMFRKAQE 196 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + STTY+ L IY +A +Y ++ C+II I Sbjct: 197 VASTTYEYLTIYLLVALMYWVV---CFIISI 224 >gi|328910284|gb|AEB61880.1| cystine ABC transporter (permease), membrane protein [Bacillus amyloliquefaciens LL3] Length = 229 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 90/216 (41%), Positives = 134/216 (62%), Gaps = 2/216 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++L+ SF +L I ++P+ +SF+ +II A+ R+ + + + YV Sbjct: 12 WDLVQQSFWPILSGGIYYSIPLTILSFIFGMIIALITALARMS-NMKPLRWVFSVYVSAV 70 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+IFY P I D F + +I+ +LN AY SEIIR+SI S+PKGQW+A Sbjct: 71 RGTPLLVQLFIIFYLFPTFNITLDPFPSAVIAFSLNVGAYASEIIRASISSVPKGQWEAG 130 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y IG+T ++T+ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 131 YTIGMTYRKTLFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGAQN 190 Query: 186 Y-QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Q L+IY E AF+Y I+ I+Q+ IE + ++ Sbjct: 191 LDQILVIYIEAAFIYWIICFLLSIVQLVIERRLDRY 226 >gi|308172211|ref|YP_003918916.1| cystine ABC transporter permease [Bacillus amyloliquefaciens DSM 7] gi|307605075|emb|CBI41446.1| cystine ABC transporter (permease), membrane protein [Bacillus amyloliquefaciens DSM 7] gi|328552021|gb|AEB22513.1| cystine ABC transporter (permease), membrane protein [Bacillus amyloliquefaciens TA208] Length = 234 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 90/216 (41%), Positives = 134/216 (62%), Gaps = 2/216 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++L+ SF +L I ++P+ +SF+ +II A+ R+ + + + YV Sbjct: 17 WDLVQQSFWPILSGGIYYSIPLTILSFIFGMIIALITALARMS-NMKPLRWVFSVYVSAV 75 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+IFY P I D F + +I+ +LN AY SEIIR+SI S+PKGQW+A Sbjct: 76 RGTPLLVQLFIIFYLFPTFNITLDPFPSAVIAFSLNVGAYASEIIRASISSVPKGQWEAG 135 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y IG+T ++T+ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 136 YTIGMTYRKTLFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGAQN 195 Query: 186 Y-QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Q L+IY E AF+Y I+ I+Q+ IE + ++ Sbjct: 196 LDQILVIYIEAAFIYWIICFLLSIVQLVIERRLDRY 231 >gi|330871999|gb|EGH06148.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 165 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 73/157 (46%), Positives = 110/157 (70%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 +FRGTPLLVQLFVI+YGLP +GI + A +I +LN +AY EI+R++I S+ +GQW+ Sbjct: 5 LFRGTPLLVQLFVIYYGLPEMGIQLEPLSAALIGFSLNMAAYACEILRAAISSVERGQWE 64 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+TR QT+R ILPQ T+ PL + FIS++K T++A+TI +PE+F+ AQ I + Sbjct: 65 AAASIGMTRWQTMRRAILPQAARTALPPLGNSFISLVKDTALAATIQVPELFRQAQLITA 124 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T++ +Y A +Y IL + +Q K+E+ V +H Sbjct: 125 RTFEIFTMYLAAALIYWILATALSHLQNKLEARVNRH 161 >gi|167562881|ref|ZP_02355797.1| amino acid ABC transporter, permease protein [Burkholderia oklahomensis EO147] gi|167570068|ref|ZP_02362942.1| amino acid ABC transporter, permease protein [Burkholderia oklahomensis C6786] Length = 219 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 84/204 (41%), Positives = 134/204 (65%), Gaps = 2/204 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L+ S P LL A++ T+ A +S V+ L+ +A++ I S +++ + YV + R Sbjct: 5 SLLAQSLPVLLQGALL-TVKFAVLSMVLGLVGAVALALMGIGRS-AVLAGLARAYVSVMR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+FVI+YGLP +GI D A +I+L+ N +AY+SE +R +I I KGQW A+Y Sbjct: 63 GTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAINGIDKGQWLAAY 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ +QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ ++AQ I+++TY Sbjct: 123 SLGLSWRQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTY 182 Query: 187 QPLIIYCELAFVYLILTSFCYIIQ 210 QPL +Y A VY +L +Q Sbjct: 183 QPLPLYLAAAAVYWVLCQLLEWVQ 206 >gi|323174568|gb|EFZ60189.1| L-cystine transport system permease protein tcyB [Escherichia coli LT-68] Length = 222 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 87/219 (39%), Positives = 134/219 (61%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFY 61 E L+IDS P LL A TL ++ L++GF +A++R+ I + + FY Sbjct: 3 ESIQLVIDSLPFLLKGA-GYTLQLSIGGMFFGLLLGFILALMRL---SPIWPVRWLARFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY +E +R++I SI KGQ Sbjct: 59 ISIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T Q +R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQIMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y I+ + +Q E+ + + Sbjct: 179 TSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQ 217 >gi|261839725|gb|ACX99490.1| amino acid ABC transporter, permease protein [Helicobacter pylori 52] Length = 229 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 86/216 (39%), Positives = 136/216 (62%), Gaps = 9/216 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIIS 55 + E L++++F +L AA ++LP+A ISF++ L I +A+I+I F +++ Sbjct: 8 LSKERLELLLEAFYPMLKAAFCISLPLAIISFILGLFIAVLVALIKIAPPKHFIHKALLA 67 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + +FYV + RGTPLLVQ+ V+FYGLP G+ D A II+ + N AY SE +R+S + Sbjct: 68 GV-NFYVSLIRGTPLLVQIVVVFYGLPAFGVYIDPIPAGIIAFSFNVGAYASETLRASFL 126 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+PK QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI E+F Sbjct: 127 SVPKDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVF 186 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + AQ+ + +Y L IY E A +Y + FC ++++ Sbjct: 187 RIAQQKANASYDFLPIYLEAALIYWL---FCLVLEV 219 >gi|333017788|gb|EGK37095.1| L-cystine transport system permease protein tcyB [Shigella flexneri K-227] Length = 222 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 87/219 (39%), Positives = 135/219 (61%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFY 61 E L+IDS P LL A TL ++ L++GF +A++R+ I + + FY Sbjct: 3 ESIQLVIDSLPFLLKGA-GYTLQLSIGGMFFGLLLGFILALMRL---SPIWPVRWLACFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY +E +R++I SI KGQ Sbjct: 59 ISIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + T + +Y + +Y I+ + +Q E+ + + Sbjct: 179 TARTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQ 217 >gi|115358998|ref|YP_776136.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria AMMD] gi|115284286|gb|ABI89802.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia ambifaria AMMD] Length = 219 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 141/215 (65%), Gaps = 2/215 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E +L+I + P ++ A++ TL A S + L++G +A++RI S+ + S + YV Sbjct: 2 EALDLVIHTLPVMVKGALL-TLKFAVASMALGLVVGLVVAIMRIG-SNRLASGLAQGYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQ+FV++YGLP +GI D A I +LTLN AY+SE +R +I+ I +GQW Sbjct: 60 LMRGTPLLVQMFVVYYGLPDLGITLDPTTAGIFTLTLNAGAYLSESMRGAILGIGRGQWA 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A++++GLT QT+R+I+ PQ + + L + IS++K TS+ S IT+ E+ ++ Q +++ Sbjct: 120 AAHSLGLTHVQTLRYIVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIA 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 T+QPL +Y A +Y +L++ +Q ++E+ ++ Sbjct: 180 ATFQPLPLYLAAAALYWVLSTLLTRLQGRVETRLS 214 >gi|289549953|ref|YP_003470857.1| amino acid ABC transporter, permease protein [Staphylococcus lugdunensis HKU09-01] gi|289179485|gb|ADC86730.1| amino acid ABC transporter, permease protein [Staphylococcus lugdunensis HKU09-01] Length = 239 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 91/211 (43%), Positives = 134/211 (63%), Gaps = 14/211 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++FV+ LI+ F A++RI S I+ I YV I RGTP+ Sbjct: 18 QAFGPMLEGLVKYSIPITIVTFVLGLILALFTALMRISTSR-ILRAIARIYVSIIRGTPM 76 Query: 71 LVQLFVIFYGLPHIG--IVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G I D+ +A II L+LN AY SEIIR IISIPKG Sbjct: 77 IVQLFIIFYGIPELGRLITGDADNQWTLAPVIAAIIGLSLNVGAYASEIIRGGIISIPKG 136 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+T +QT++ IILPQ I S L + F+S++K TS+ I + E+F+ AQ Sbjct: 137 QTEAAYSIGMTYRQTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQE 196 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + STTY+ IY +A +Y ++ C+II + Sbjct: 197 VASTTYEYFTIYILVAIMYWVV---CFIISV 224 >gi|219854226|ref|YP_002471348.1| hypothetical protein CKR_0883 [Clostridium kluyveri NBRC 12016] gi|219567950|dbj|BAH05934.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 219 Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 134/204 (65%), Gaps = 2/204 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 MK I D P LL + V+T+ + I+ ++ I+G F+A++++ + ++ +I Sbjct: 1 MKAVDVGFIKDILPILLKGS-VMTIELTVITLILGTILGIFLALLKLS-KNMVLRIISSI 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y W+FRGTPLL+QLF +YGLP +GI F A ++ L LN AY++EIIR I SI KG Sbjct: 59 YTWVFRGTPLLLQLFFFYYGLPFVGIELKPFSAAVLGLALNCGAYMAEIIRGGIQSIHKG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ A+G + +T+R IILPQT P+ +EFI+ILK TS+ STI + E+ ++AQ+ Sbjct: 119 QFEAAKALGFSYGETMRRIILPQTWKVIIPPVGNEFIAILKDTSLVSTIAMVELMRSAQQ 178 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 I ++++ P+ ++ A +YLI+T+ Sbjct: 179 IYASSFDPISVFFTAAVLYLIMTT 202 >gi|309813087|ref|ZP_07706813.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185] gi|308432971|gb|EFP56877.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185] Length = 495 Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 80/214 (37%), Positives = 135/214 (63%), Gaps = 1/214 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + I ++ +L A + T+P+ SF I L++ +A+ R+ ++ +S ++ IFR Sbjct: 280 DTIKNNIGPMLVATLKGTIPLTAASFAIGLVLALGVALARMS-ANAALSWPARIFISIFR 338 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQL +IF+G+P +GI + + II+ +LN +AY +EIIR++I+S+PKGQW+A+ Sbjct: 339 GTPLLVQLAIIFFGMPQLGIKLSPWPSAIIAFSLNVAAYSAEIIRAAILSVPKGQWEAAE 398 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 IG+ R +R IILPQ + + PLS+ IS++K TS+ASTI + E+F+ AQ + + Sbjct: 399 TIGMNRATALRRIILPQALRVAVPPLSNTLISLVKDTSLASTILVTEMFRQAQIAAAPSG 458 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 L +Y A +Y L ++Q ++E+ + +H Sbjct: 459 DFLELYGVAAAIYWALCFILSLVQGRLENRLGRH 492 >gi|330684943|gb|EGG96623.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU121] Length = 239 Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 88/211 (41%), Positives = 132/211 (62%), Gaps = 14/211 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++FV+ LII F A++RI S I+ I YV I RGTP+ Sbjct: 18 QAFGPMLEGLVKYSIPITLVTFVLGLIIALFTALMRISTSK-ILKGIARVYVSIIRGTPM 76 Query: 71 LVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G + + +A II L+LN AY SEIIR IISIPKG Sbjct: 77 IVQLFIIFYGIPELGRLLTNDADNQWTLAPVIAAIIGLSLNVGAYASEIIRGGIISIPKG 136 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+ +QT++ IILPQ I S L + F+ ++K TS+ I + E+F+ AQ Sbjct: 137 QTEAAYSIGMNYRQTVQRIILPQAIRVSIPALGNTFLGLIKDTSLLGFILVAEMFRKAQE 196 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + ST+Y+ L IY +A +Y ++ C+II + Sbjct: 197 VASTSYEYLTIYLLVALMYWVV---CFIISV 224 >gi|300853856|ref|YP_003778840.1| putative amino acid ABC transporter permease [Clostridium ljungdahlii DSM 13528] gi|300433971|gb|ADK13738.1| predicted amino acid ABC transporter, permease component [Clostridium ljungdahlii DSM 13528] Length = 198 Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 79/182 (43%), Positives = 126/182 (69%), Gaps = 1/182 (0%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +T+ + I+ ++ ++G F+A++++ + ++ L+ FY WIFRGTPLL+QLF +YGLP Sbjct: 1 MTIELTVITLILGTMLGVFLALLKLS-KNIVLKLVSSFYTWIFRGTPLLLQLFFFYYGLP 59 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 IGI F A I+ L LN AY++EIIR I SI KGQ++A+ A+G + +T+R IILP Sbjct: 60 FIGIELTPFTAAILGLGLNCGAYMAEIIRGGIQSINKGQFEAAKALGFSYVETMRKIILP 119 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 QT P+ +EFISILK TS+ STI + E+ ++AQ+I ++++ P+ ++ A +YLI+ Sbjct: 120 QTWKIIIPPVGNEFISILKDTSLVSTIAMVELMRSAQQIYASSFDPISVFLTAAILYLIM 179 Query: 203 TS 204 T+ Sbjct: 180 TT 181 >gi|10954336|gb|AAG24254.1| YckJ [Bacillus subtilis] Length = 234 Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 89/216 (41%), Positives = 133/216 (61%), Gaps = 2/216 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++L+ SF +L I T+P+ +SF+ +I+ A+ R+ + + YV Sbjct: 17 WDLVQQSFWPILSGGIYYTIPLTILSFIFGMILALITALARMS-KVRPLRWVFSVYVSAV 75 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+IFY P I D F + +I+ +LN AY SEIIR+SI+S+PKGQW+A Sbjct: 76 RGTPLLVQLFIIFYLFPAFNITLDPFPSAVIAFSLNVGAYASEIIRASILSVPKGQWEAG 135 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y IG+T ++T+ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 136 YTIGMTHQKTLFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGARN 195 Query: 186 Y-QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Q L+IY E AF+Y I+ ++Q IE + ++ Sbjct: 196 LDQILVIYIEAAFIYWIICFLLSLVQHVIERRLDRY 231 >gi|82776402|ref|YP_402751.1| putative transport system permease protein [Shigella dysenteriae Sd197] gi|309789344|ref|ZP_07683934.1| L-cystine transport system permease protein tcyB [Shigella dysenteriae 1617] gi|81240550|gb|ABB61260.1| putative transport system permease protein [Shigella dysenteriae Sd197] gi|308922738|gb|EFP68255.1| L-cystine transport system permease protein tcyB [Shigella dysenteriae 1617] Length = 222 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 87/219 (39%), Positives = 134/219 (61%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFY 61 E L+IDS P LL A TL ++ L++GF +A++R+ I + + FY Sbjct: 3 ESIQLVIDSLPFLLKGA-GYTLQLSIGGMFFGLLLGFILALMRL---SPIWPVRWLARFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + IFRGTPL+ QLF+I+YGLP GI D + +I L+LN +AY +E +R++I SI KGQ Sbjct: 59 ISIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R ILPQ + LS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQTMRRAILPQAARVALPTLSNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y I+ + +Q E+ + + Sbjct: 179 TSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQ 217 >gi|242243789|ref|ZP_04798233.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis W23144] gi|242232757|gb|EES35069.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis W23144] Length = 239 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 90/223 (40%), Positives = 136/223 (60%), Gaps = 11/223 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++F++ LII F A++RI S ++ I YV I RGTP+ Sbjct: 18 QAFGPMLEGLVKYSIPITLVTFILGLIIALFTALMRISTSK-LLRGIARVYVSIIRGTPM 76 Query: 71 LVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G + + VA +I L+LN AY SEIIR I+SIPKG Sbjct: 77 IVQLFIIFYGIPELGRLVTNNADNQWTLAPVVAAVIGLSLNVGAYASEIIRGGILSIPKG 136 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+ +QT++ IILPQ I S L + F+S++K TS+ I + E+F+ AQ Sbjct: 137 QTEAAYSIGMNYRQTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQE 196 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + STTY+ L IY +A +Y ++ IIQ ES + + S Sbjct: 197 VASTTYEYLTIYLLVALMYWVVCFVISIIQGWYESRIERGYRS 239 >gi|16077428|ref|NP_388242.1| cystine ABC transporter permease [Bacillus subtilis subsp. subtilis str. 168] gi|221308174|ref|ZP_03590021.1| hypothetical protein Bsubs1_02043 [Bacillus subtilis subsp. subtilis str. 168] gi|221312496|ref|ZP_03594301.1| hypothetical protein BsubsN3_02029 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221321694|ref|ZP_03602988.1| hypothetical protein BsubsS_02054 [Bacillus subtilis subsp. subtilis str. SMY] gi|321314029|ref|YP_004206316.1| cystine ABC transporter permease [Bacillus subtilis BSn5] gi|1175700|sp|P42200|TCYB_BACSU RecName: Full=L-cystine transport system permease protein tcyB gi|666982|emb|CAA54725.1| putative membrane spanning subunit [Bacillus subtilis subsp. subtilis str. JH642] gi|1805431|dbj|BAA08993.1| yckJ [Bacillus subtilis] gi|2632646|emb|CAB12154.1| cystine ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] gi|291482759|dbj|BAI83834.1| hypothetical protein BSNT_00640 [Bacillus subtilis subsp. natto BEST195] gi|320020303|gb|ADV95289.1| cystine ABC transporter (permease) [Bacillus subtilis BSn5] Length = 234 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 88/216 (40%), Positives = 133/216 (61%), Gaps = 2/216 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++L+ SF +L I T+P+ +SF+ +I+ A+ R+ + + YV Sbjct: 17 WDLVQQSFWPILSGGIYYTIPLTILSFIFGMILALITALARMS-KVRPLRWVFSVYVSAI 75 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+IFY P + D F + +I+ +LN AY SEIIR+SI+S+PKGQW+A Sbjct: 76 RGTPLLVQLFIIFYLFPAFNVTLDPFPSAVIAFSLNVGAYASEIIRASILSVPKGQWEAG 135 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y IG+T ++T+ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 136 YTIGMTHQKTLFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGARN 195 Query: 186 Y-QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Q L+IY E AF+Y I+ ++Q IE + ++ Sbjct: 196 LDQILVIYIEAAFIYWIICFLLSLVQHVIERRLDRY 231 >gi|153953604|ref|YP_001394369.1| amino acid ABC transporter permease [Clostridium kluyveri DSM 555] gi|146346485|gb|EDK33021.1| Amino acid ABC transporter, permease protein [Clostridium kluyveri DSM 555] Length = 216 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 81/198 (40%), Positives = 132/198 (66%), Gaps = 2/198 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 I D P LL + V+T+ + I+ ++ I+G F+A++++ + ++ +I Y W+FR Sbjct: 4 GFIKDILPILLKGS-VMTIELTVITLILGTILGIFLALLKLS-KNMVLRIISSIYTWVFR 61 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QLF +YGLP +GI F A ++ L LN AY++EIIR I SI KGQ++A+ Sbjct: 62 GTPLLLQLFFFYYGLPFVGIELKPFSAAVLGLALNCGAYMAEIIRGGIQSIHKGQFEAAK 121 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G + +T+R IILPQT P+ +EFI+ILK TS+ STI + E+ ++AQ+I ++++ Sbjct: 122 ALGFSYGETMRRIILPQTWKVIIPPVGNEFIAILKDTSLVSTIAMVELMRSAQQIYASSF 181 Query: 187 QPLIIYCELAFVYLILTS 204 P+ ++ A +YLI+T+ Sbjct: 182 DPISVFFTAAVLYLIMTT 199 >gi|240145778|ref|ZP_04744379.1| L-cystine ABC transporter, permease protein [Roseburia intestinalis L1-82] gi|257202110|gb|EEV00395.1| L-cystine ABC transporter, permease protein [Roseburia intestinalis L1-82] Length = 230 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 85/212 (40%), Positives = 138/212 (65%), Gaps = 4/212 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L+ ++F +L ++ T+P+ +SF I +II A+ I ++ I Y+W+FR Sbjct: 18 ELMKNAFWSMLRQGLLYTIPLTLVSFAIGVIIAVLCALF-IINKIPVLKQIAGIYIWVFR 76 Query: 67 GTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 GTPLLVQLF++++G+ + +GI + +VA I +L+LN AY +E IR++I+SI KGQW+A Sbjct: 77 GTPLLVQLFIMYWGICNPLGI--NKWVACISALSLNVGAYSAETIRAAILSINKGQWEAG 134 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y++G++ +QT R II+PQ T S PL + FI ++K TS+ASTI I E+F+ AQ +++ Sbjct: 135 YSLGMSYQQTFRRIIIPQAATVSIPPLFNTFIGLVKDTSLASTIMIGEMFRKAQEAAASS 194 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + L IY E+A +YL+ + +Q IE + Sbjct: 195 LEYLWIYIEVALIYLLFCTLLTGLQKWIEKKL 226 >gi|315659420|ref|ZP_07912283.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus lugdunensis M23590] gi|315495539|gb|EFU83871.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus lugdunensis M23590] Length = 239 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 90/211 (42%), Positives = 134/211 (63%), Gaps = 14/211 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++F++ LI+ F A++RI S I+ I YV I RGTP+ Sbjct: 18 QAFGPMLEGLVKYSIPITIVTFILGLILALFTALMRISTSR-ILRAIARIYVSIIRGTPM 76 Query: 71 LVQLFVIFYGLPHIG--IVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G I D+ +A II L+LN AY SEIIR IISIPKG Sbjct: 77 IVQLFIIFYGIPELGRLITGDADNQWTLAPVIAAIIGLSLNVGAYASEIIRGGIISIPKG 136 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+T +QT++ IILPQ I S L + F+S++K TS+ I + E+F+ AQ Sbjct: 137 QTEAAYSIGMTYRQTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQE 196 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + STTY+ IY +A +Y ++ C+II + Sbjct: 197 VASTTYEYFTIYILVAIMYWVV---CFIISV 224 >gi|293367120|ref|ZP_06613791.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis M23864:W2(grey)] gi|291318681|gb|EFE59056.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis M23864:W2(grey)] Length = 239 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 90/223 (40%), Positives = 136/223 (60%), Gaps = 11/223 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++F++ LII F A++RI S ++ I YV I RGTP+ Sbjct: 18 QAFGPMLEGLVKYSIPITLVTFILGLIIALFTALMRISTSK-LLRGIARVYVSIIRGTPM 76 Query: 71 LVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G + + +A II L+LN AY SEIIR I+SIPKG Sbjct: 77 IVQLFIIFYGIPELGRLVTNNADNQWTLAPVIAAIIGLSLNVGAYASEIIRGGILSIPKG 136 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+ +QT++ IILPQ I S L + F+S++K TS+ I + E+F+ AQ Sbjct: 137 QTEAAYSIGMNYRQTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQE 196 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + STTY+ L IY +A +Y ++ IIQ ES + + S Sbjct: 197 VASTTYEYLTIYLLVALMYWVVCFVISIIQGWYESRIERGYRS 239 >gi|296332721|ref|ZP_06875181.1| cystine ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673066|ref|YP_003864738.1| cystine ABC transporter permease [Bacillus subtilis subsp. spizizenii str. W23] gi|296150001|gb|EFG90890.1| cystine ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411310|gb|ADM36429.1| cystine ABC transporter (permease) [Bacillus subtilis subsp. spizizenii str. W23] Length = 234 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 88/216 (40%), Positives = 133/216 (61%), Gaps = 2/216 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++L+ SF +L I T+P+ +SF+ +I+ A+ R+ + + YV Sbjct: 17 WDLVQQSFWPILSGGIYYTIPLTILSFIFGMILALITALARMS-KVRPLRWVFSVYVSAI 75 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+IFY P I D F + +I+ +LN AY SEIIR+SI+S+PKGQW+A Sbjct: 76 RGTPLLVQLFIIFYLFPAFNITLDPFPSAVIAFSLNVGAYASEIIRASILSVPKGQWEAG 135 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y IG+T ++T+ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 136 YTIGMTHQKTLFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGARN 195 Query: 186 Y-QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Q L+IY E AF+Y ++ ++Q IE + ++ Sbjct: 196 LDQILVIYIEAAFIYWMICFLLSLVQHVIERRLDRY 231 >gi|329726529|gb|EGG62992.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU144] gi|329735014|gb|EGG71311.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU028] Length = 239 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 87/211 (41%), Positives = 133/211 (63%), Gaps = 14/211 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++F++ LII F A++RI S ++ I YV I RGTP+ Sbjct: 18 QAFGPMLEGLVKYSIPITLVTFILGLIIALFTALMRISTSK-LLRGIARVYVSIIRGTPM 76 Query: 71 LVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G + + +A +I L+LN AY SEIIR I+SIPKG Sbjct: 77 IVQLFIIFYGIPELGRLVTNNADNQWTLAPVIAAVIGLSLNVGAYASEIIRGGILSIPKG 136 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+ +QT++ IILPQ I S L + F+S++K TS+ I + E+F+ AQ Sbjct: 137 QTEAAYSIGMNYRQTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQE 196 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + STTY+ L IY +A +Y ++ C+II I Sbjct: 197 VASTTYEYLTIYLLVALMYWVV---CFIISI 224 >gi|228474812|ref|ZP_04059543.1| L-cystine transport system permease protein TcyB [Staphylococcus hominis SK119] gi|228271475|gb|EEK12843.1| L-cystine transport system permease protein TcyB [Staphylococcus hominis SK119] Length = 239 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 88/211 (41%), Positives = 131/211 (62%), Gaps = 14/211 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++F++ LII F A++RI S ++ I YV I RGTP+ Sbjct: 18 QAFGPMLEGLVKYSIPITIVTFILGLIIALFTALMRIS-SSKVLRGIARVYVSIIRGTPM 76 Query: 71 LVQLFVIFYGLPHIGIV----------FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G + S V+ II L+LN AY SEIIR IISIPKG Sbjct: 77 IVQLFIIFYGIPELGRLITGNADEQWTLSSVVSAIIGLSLNVGAYASEIIRGGIISIPKG 136 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+ +QTI+ IILPQ I S L + F+ ++K TS+ I + E+F+ AQ Sbjct: 137 QTEAAYSIGMNYRQTIQRIILPQAIRVSVPALGNTFLGLIKDTSLLGFILVAEMFRKAQE 196 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + STTY+ IY +A +Y ++ C+II + Sbjct: 197 VASTTYEYFTIYILVAVMYWVV---CFIISV 224 >gi|239636041|ref|ZP_04677055.1| L-cystine transport system permease protein TcyB [Staphylococcus warneri L37603] gi|239598312|gb|EEQ80795.1| L-cystine transport system permease protein TcyB [Staphylococcus warneri L37603] Length = 239 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 87/211 (41%), Positives = 132/211 (62%), Gaps = 14/211 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++FV+ LII F A++RI S ++ I YV I RGTP+ Sbjct: 18 QAFGPMLEGLVKYSIPITLVTFVLGLIIALFTALMRISTSK-VLKGIARVYVSIIRGTPM 76 Query: 71 LVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G + + +A II L+LN AY SEIIR IISIPKG Sbjct: 77 IVQLFIIFYGIPELGRLLTNDADNQWTLAPVIAAIIGLSLNVGAYASEIIRGGIISIPKG 136 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+ +QT++ IILPQ I S L + F+ ++K TS+ I + E+F+ AQ Sbjct: 137 QTEAAYSIGMNYRQTVQRIILPQAIRVSIPALGNTFLGLIKDTSLLGFILVAEMFRKAQE 196 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + ST+Y+ L IY +A +Y ++ C+II + Sbjct: 197 VASTSYEYLTIYLLVALMYWVV---CFIISV 224 >gi|146282695|ref|YP_001172848.1| cystine ABC tranporter, permease protein, putative [Pseudomonas stutzeri A1501] gi|145570900|gb|ABP80006.1| cystine ABC tranporter, permease protein, putative [Pseudomonas stutzeri A1501] Length = 222 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 86/216 (39%), Positives = 132/216 (61%), Gaps = 4/216 (1%) Query: 6 FNLIIDSFPQLLYAAI-VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 L++DS P LL A V L ++ + F + L G + + F+ + + YV Sbjct: 6 LQLVLDSLPFLLKGAWWTVVLSLSGMFFGLLLGFGLALLRLYAFWP---LQWLARVYVSF 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRGTPLLVQLF+I+YGLP +GI D A +I +LN +AY +EI+R++I SI +GQW+A Sbjct: 63 FRGTPLLVQLFMIYYGLPQLGIQLDPLPAALIGFSLNMAAYTAEILRAAIASIDRGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + +IG+ R QT+ ILPQ T+ PL + FIS++K T++A+TI +PE+F+ AQ I + Sbjct: 123 AASIGMGRAQTLYRAILPQAARTALPPLGNSFISLVKDTALAATIQVPELFRQAQLITAR 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T++ +Y A +Y +L S Q ++E V +H Sbjct: 183 TFEIFTMYLAAALIYWLLASVLAYFQGRLEHRVNRH 218 >gi|57865359|ref|YP_189560.1| amino acid ABC transporter permease [Staphylococcus epidermidis RP62A] gi|251811884|ref|ZP_04826357.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis BCM-HMP0060] gi|282875171|ref|ZP_06284044.1| ABC transporter, permease protein [Staphylococcus epidermidis SK135] gi|57636017|gb|AAW52805.1| amino acid ABC transporter, permease protein [Staphylococcus epidermidis RP62A] gi|251804681|gb|EES57338.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis BCM-HMP0060] gi|281295936|gb|EFA88457.1| ABC transporter, permease protein [Staphylococcus epidermidis SK135] gi|329734620|gb|EGG70931.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU045] Length = 239 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 89/223 (39%), Positives = 136/223 (60%), Gaps = 11/223 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++F++ LII F A++RI S ++ I YV I RGTP+ Sbjct: 18 QAFGPMLEGLVKYSIPITLVTFILGLIIALFTALMRISTSK-LLRGIARVYVSIIRGTPM 76 Query: 71 LVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G + + +A +I L+LN AY SEIIR I+SIPKG Sbjct: 77 IVQLFIIFYGIPELGRLVTNNADNQWTLAPVIAAVIGLSLNVGAYASEIIRGGILSIPKG 136 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+ +QT++ IILPQ I S L + F+S++K TS+ I + E+F+ AQ Sbjct: 137 QTEAAYSIGMNYRQTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQE 196 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + STTY+ L IY +A +Y ++ IIQ ES + + S Sbjct: 197 VASTTYEYLTIYLLVALMYWVVCFVISIIQGWYESRIERGYRS 239 >gi|208434842|ref|YP_002266508.1| amino acid ABC transporter, permease protein [Helicobacter pylori G27] gi|208432771|gb|ACI27642.1| amino acid ABC transporter, permease protein [Helicobacter pylori G27] Length = 229 Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 85/217 (39%), Positives = 134/217 (61%), Gaps = 6/217 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIISLIM 58 E L++++F +L AA ++LP+A SF++ L I +A+I+I F +++ + Sbjct: 11 ERLELLLEAFYPMLKAAFCISLPLAITSFILGLFIAVMVALIKIAPPKHFIHKALLAGV- 69 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 +FYV + RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S + +P Sbjct: 70 NFYVSLIRGTPLLVQIVVVFYGLPALGVYMDPIPAGIIAFSFNVGAYASETLRASFLFVP 129 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 K QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+AS +TI E+F+ A Sbjct: 130 KDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIA 189 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q+ + +Y L IY E A +Y + +IQ ++E Sbjct: 190 QQKANASYDFLPIYLEAALIYWLFCLVLEVIQKRVEK 226 >gi|154684846|ref|YP_001420007.1| YckJ [Bacillus amyloliquefaciens FZB42] gi|154350697|gb|ABS72776.1| YckJ [Bacillus amyloliquefaciens FZB42] Length = 229 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 90/216 (41%), Positives = 133/216 (61%), Gaps = 2/216 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++L+ SF +L I ++P+ +SF+ +II A+ R+ + + + YV Sbjct: 12 WDLVQQSFWPILSGGIYYSIPLTILSFIFGMIIALITALARMS-NMKPLRWVFSVYVSAV 70 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+IFY P I D F + +I+ +LN AY SEIIR+SI S+PKGQW+A Sbjct: 71 RGTPLLVQLFIIFYLFPTFNITLDPFPSAVIAFSLNVGAYASEIIRASISSVPKGQWEAG 130 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y IG+T ++T+ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ I + Sbjct: 131 YTIGMTYRKTLFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGAQN 190 Query: 186 Y-QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Q L+IY E AF+Y I+ I+Q IE + ++ Sbjct: 191 LDQILVIYIEAAFIYWIICFLLSIVQHVIERRLDRY 226 >gi|291534358|emb|CBL07470.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Roseburia intestinalis M50/1] Length = 230 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 85/212 (40%), Positives = 138/212 (65%), Gaps = 4/212 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L+ ++F +L ++ T+P+ +SF I +II A+ I ++ I Y+W+FR Sbjct: 18 ELMKNAFWPMLRQGLLYTIPLTLVSFAIGVIIAVLCALF-IINKIPVLKQIAGIYIWVFR 76 Query: 67 GTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 GTPLLVQLF++++G+ + +GI + +VA I +L+LN AY +E IR++I+SI KGQW+A Sbjct: 77 GTPLLVQLFIMYWGICNPLGI--NKWVACISALSLNVGAYSAETIRAAILSINKGQWEAG 134 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y++G++ +QT R II+PQ T S PL + FI ++K TS+ASTI I E+F+ AQ +++ Sbjct: 135 YSLGMSYQQTFRRIIIPQAATVSIPPLFNTFIGLVKDTSLASTIMIGEMFRKAQEAAASS 194 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + L IY E+A +YL+ + +Q IE + Sbjct: 195 LEYLWIYIEVALIYLLFCTLLTGLQKWIEKKL 226 >gi|327480953|gb|AEA84263.1| cystine ABC transporter, permease protein, putative [Pseudomonas stutzeri DSM 4166] Length = 222 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 73/167 (43%), Positives = 110/167 (65%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + + YV FRGTPLLVQLF+I+YGLP +GI D A +I +LN +AY +EI+R++ Sbjct: 52 LQWLARVYVSFFRGTPLLVQLFMIYYGLPQLGIQLDPLPAALIGFSLNMAAYTAEILRAA 111 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SI +GQW+A+ +IG+ R QT+ ILPQ T+ PL + FIS++K T++A+TI +PE Sbjct: 112 IASIDRGQWEAAASIGMGRAQTLYRAILPQAARTALPPLGNSFISLVKDTALAATIQVPE 171 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +F+ AQ I + T++ +Y A +Y +L S Q ++E V +H Sbjct: 172 LFRQAQLITARTFEIFTMYLAAALIYWLLASVLAYFQGRLEHRVNRH 218 >gi|70725641|ref|YP_252555.1| hypothetical protein SH0640 [Staphylococcus haemolyticus JCSC1435] gi|68446365|dbj|BAE03949.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 241 Score = 157 bits (397), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 88/211 (41%), Positives = 132/211 (62%), Gaps = 14/211 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++F++ LII F A++RI S ++ I YV I RGTP+ Sbjct: 20 QAFGPMLEGLLKYSIPITIVTFILGLIIALFTALMRISTSK-VLKGIARVYVSIIRGTPM 78 Query: 71 LVQLFVIFYGLPHIGIV----------FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G + S ++ II L+LN AY SEIIR IISIPKG Sbjct: 79 IVQLFIIFYGIPELGRLVTGNADEQWTLSSVISAIIGLSLNVGAYASEIIRGGIISIPKG 138 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+ +QTI+ IILPQ I S L + F+S++K TS+ I + E+F+ AQ Sbjct: 139 QTEAAYSIGMNYRQTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQE 198 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + STTY+ IY +A +Y ++ C+II + Sbjct: 199 VASTTYEYFTIYILVAVMYWVI---CFIISV 226 >gi|210135129|ref|YP_002301568.1| amino acid ABC transporter [Helicobacter pylori P12] gi|210133097|gb|ACJ08088.1| amino acid ABC transporter [Helicobacter pylori P12] Length = 237 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 84/215 (39%), Positives = 135/215 (62%), Gaps = 9/215 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIIS 55 + E L++++F +L AA ++LP+A SF++ L+I +A+I+I F +++ Sbjct: 16 LSKERLELLLEAFYPMLKAAFCISLPLAVTSFILGLLIAIVVALIKIAPPKHFIHRALLA 75 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + +FYV + RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S + Sbjct: 76 GV-NFYVSLIRGTPLLVQIVVVFYGLPALGVYMDPIPAGIIAFSFNVGAYASETLRASFL 134 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+PK QWD+S ++GL QT H+I Q + + LS+ FIS+ K TS+ S +TI E+F Sbjct: 135 SVPKDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLTSVVTIAEVF 194 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 + AQ+ + +Y L IY E A +Y + FC +++ Sbjct: 195 RIAQQKANASYDFLPIYLEAALIYWL---FCLVLE 226 >gi|224823797|ref|ZP_03696906.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] gi|224604252|gb|EEG10426.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] Length = 219 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 80/219 (36%), Positives = 136/219 (62%), Gaps = 3/219 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EW L + P +L T+ A + V+ L++GF +A++RI +++ ++ FYV Sbjct: 2 EWLELARQALP-VLIKGTGYTVFFALSTMVLGLLLGFVVALVRIA-RVPLLAPLLAFYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQ+FVI+YGLP +GI F+ A ++SLTLN +AY+SE +R +I + +GQWD Sbjct: 60 VMRGTPLLVQIFVIYYGLPSVGIEFEPVTAGVLSLTLNVAAYLSESLRGAIAGVERGQWD 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++GL Q +R ++ PQ + + L++ IS++K TS+ S IT+ E+ + +++ Sbjct: 120 AAQSLGLNWWQAMRFVVAPQALRLAVPSLANSLISLIKDTSLVSVITVSELMMATKDVIA 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 T+QPL +Y A +Y L++ +Q ++E + H Y Sbjct: 180 QTFQPLPLYLMAAAIYWALSALFEQVQKRLELRLA-HAY 217 >gi|167582028|ref|ZP_02374902.1| amino acid ABC transporter, permease protein [Burkholderia thailandensis TXDOH] gi|167620193|ref|ZP_02388824.1| amino acid ABC transporter, permease protein [Burkholderia thailandensis Bt4] gi|257139261|ref|ZP_05587523.1| amino acid ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 219 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 84/204 (41%), Positives = 133/204 (65%), Gaps = 5/204 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L+ S P LL A++ T+ A +S + L+ +A++ I S + L YV + R Sbjct: 5 SLLAQSLPVLLQGALL-TVKFAVLSMLFGLVGAVVLALMGIGGSRVLAGL-ARAYVSVMR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+FVI+YGLP +G+ D A +I+L+ N +AY+SE +R +I I KGQW A+Y Sbjct: 63 GTPLLVQIFVIYYGLPSLGVSLDPTPAGVIALSANVAAYMSESMRGAINGIEKGQWLAAY 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ +QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ ++AQ I+++TY Sbjct: 123 SLGLSWRQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTY 182 Query: 187 QPLIIYCELAFVYLILTSFCYIIQ 210 QPL +Y A VY +L C I++ Sbjct: 183 QPLPLYLAAAGVYWVL---CQILE 203 >gi|314935665|ref|ZP_07843017.1| amino acid ABC transporter, permease protein [Staphylococcus hominis subsp. hominis C80] gi|313656230|gb|EFS19970.1| amino acid ABC transporter, permease protein [Staphylococcus hominis subsp. hominis C80] Length = 241 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 88/211 (41%), Positives = 130/211 (61%), Gaps = 14/211 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++F++ LII F A++RI S + I YV I RGTP+ Sbjct: 20 QAFGPMLEGLVKYSIPITIVTFILGLIIALFTALMRIS-SSKVSRGIARVYVSIIRGTPM 78 Query: 71 LVQLFVIFYGLPHIGIV----------FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G + S V+ II L+LN AY SEIIR IISIPKG Sbjct: 79 IVQLFIIFYGIPELGRLITGNADEQWTLSSVVSAIIGLSLNVGAYASEIIRGGIISIPKG 138 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+ +QTI+ IILPQ I S L + F+ ++K TS+ I + E+F+ AQ Sbjct: 139 QTEAAYSIGMNYRQTIQRIILPQAIRVSVPALGNTFLGLIKDTSLLGFILVAEMFRKAQE 198 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + STTY+ IY +A +Y ++ C+II + Sbjct: 199 VASTTYEYFTIYILVAVMYWVV---CFIISV 226 >gi|283768561|ref|ZP_06341473.1| ABC transporter, permease protein [Bulleidia extructa W1219] gi|283104953|gb|EFC06325.1| ABC transporter, permease protein [Bulleidia extructa W1219] Length = 224 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 83/215 (38%), Positives = 134/215 (62%), Gaps = 1/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N++ SF +L A + +TLP+A +SF LII A+++ + ++ ++ YVW+ Sbjct: 6 WNIVATSFWPILKAGLTMTLPLAFLSFFFGLIIAVLAALVQ-YAKIPVVKKLVRIYVWLI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQL +IFYGLP IGI + FVA + ++ AY+SE IR ++ SIP+GQ +A Sbjct: 65 RGTPLLVQLMIIFYGLPVIGIQSNPFVAATVGFSICEGAYMSEAIRGALESIPRGQSEAG 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y +G+ Q + +I+LPQ T+ LS+ IS++K +S+A+ IT+ E+F T QR Sbjct: 125 YCVGMNFVQVMWYIVLPQAFRTAFPALSNSLISLVKDSSLAANITVVEMFMTTQRFAGKF 184 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y + +Y E+A VYL+ + Q +IE ++++ Sbjct: 185 YTFMPLYIEVALVYLLFCTIITFFQSRIEKKLSRY 219 >gi|83718672|ref|YP_443032.1| amino acid ABC transporter permease [Burkholderia thailandensis E264] gi|83652497|gb|ABC36560.1| amino acid ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 274 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 84/204 (41%), Positives = 133/204 (65%), Gaps = 5/204 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L+ S P LL A++ T+ A +S + L+ +A++ I S + L YV + R Sbjct: 60 SLLAQSLPVLLQGALL-TVKFAVLSMLFGLVGAVVLALMGIGGSRVLAGL-ARAYVSVMR 117 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+FVI+YGLP +G+ D A +I+L+ N +AY+SE +R +I I KGQW A+Y Sbjct: 118 GTPLLVQIFVIYYGLPSLGVSLDPTPAGVIALSANVAAYMSESMRGAINGIEKGQWLAAY 177 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ +QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ ++AQ I+++TY Sbjct: 178 SLGLSWRQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTY 237 Query: 187 QPLIIYCELAFVYLILTSFCYIIQ 210 QPL +Y A VY +L C I++ Sbjct: 238 QPLPLYLAAAGVYWVL---CQILE 258 >gi|238854604|ref|ZP_04644937.1| L-cystine transport system permease protein TcyB [Lactobacillus jensenii 269-3] gi|282933427|ref|ZP_06338806.1| L-cystine transport system permease protein TcyB [Lactobacillus jensenii 208-1] gi|238832789|gb|EEQ25093.1| L-cystine transport system permease protein TcyB [Lactobacillus jensenii 269-3] gi|281302441|gb|EFA94664.1| L-cystine transport system permease protein TcyB [Lactobacillus jensenii 208-1] Length = 225 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 90/210 (42%), Positives = 136/210 (64%), Gaps = 12/210 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFF--SDTIISLIMHF--- 60 + +I S P++L A + T+PIA ISF++ +II A+IR+ + + HF Sbjct: 2 WEIIKTSVPEILIAGLKYTIPIAIISFILGIIIASITALIRMSTPKGNPLKKGFWHFLKA 61 Query: 61 ----YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 YVW+FR TPLLVQLF++FYGLP IGI ++ A I++ +LN AY SE IR+SI++ Sbjct: 62 FFTFYVWLFRSTPLLVQLFIVFYGLPSIGIQLGAWTAGILTFSLNTGAYASETIRASILA 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+ QW+A+Y+IGL + + +I PQ I + PLS+ FI ++K TS+AS+IT+ E+F Sbjct: 122 VPQDQWEAAYSIGLPYHKVLSRVIFPQAIRIAIPPLSNSFIGLVKDTSLASSITLVEMFM 181 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFC 206 +Q I S YQP+++Y +A +Y I FC Sbjct: 182 VSQEIASHNYQPMLMYSIVAIIYAI---FC 208 >gi|332638370|ref|ZP_08417233.1| amino acid ABC transporter permease component [Weissella cibaria KACC 11862] Length = 233 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 93/221 (42%), Positives = 134/221 (60%), Gaps = 12/221 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---------IISL 56 F I PQL+ A I T+P+A ISFV ++II +AV+R + I+ Sbjct: 2 FEFIATYAPQLIVAGIKYTVPLALISFVFAVIIAALVAVLRSYVPHATGIKSIGWRILKF 61 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSS 113 I+ FYVW+FR TP+LVQLFV+FYGLP +GI + + A + L+LN +AY SE IR++ Sbjct: 62 ILWFYVWLFRSTPMLVQLFVVFYGLPKLGISWLSPSGWAAAVWVLSLNTAAYASEAIRAA 121 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SIP Q +A A+G+T Q IILPQ S L++ FIS++K TS+AS +TI E Sbjct: 122 ITSIPDTQREAGAALGMTDAQIFIRIILPQAARISIPTLANSFISLVKDTSLASVVTIVE 181 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 +F +Q++ +T ++PL +Y +A +Y I S I Q I+ Sbjct: 182 MFYLSQQLAATNFEPLQMYLLVAAIYAIFVSILSIPQHYIQ 222 >gi|15595510|ref|NP_249004.1| L-cysteine transporter of ABC system YecS [Pseudomonas aeruginosa PAO1] gi|107099295|ref|ZP_01363213.1| hypothetical protein PaerPA_01000307 [Pseudomonas aeruginosa PACS2] gi|116054040|ref|YP_788483.1| putative permease of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|218889053|ref|YP_002437917.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254243411|ref|ZP_04936733.1| hypothetical protein PA2G_04225 [Pseudomonas aeruginosa 2192] gi|296386807|ref|ZP_06876306.1| ABC transporter permease [Pseudomonas aeruginosa PAb1] gi|313112074|ref|ZP_07797858.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016] gi|9946159|gb|AAG03702.1|AE004469_7 L-cysteine transporter of ABC system YecS [Pseudomonas aeruginosa PAO1] gi|115589261|gb|ABJ15276.1| putative permease of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|126196789|gb|EAZ60852.1| hypothetical protein PA2G_04225 [Pseudomonas aeruginosa 2192] gi|218769276|emb|CAW25036.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|310884360|gb|EFQ42954.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016] Length = 230 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 87/219 (39%), Positives = 138/219 (63%), Gaps = 6/219 (2%) Query: 4 EWFNLIID----SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 EW +++ ++P LL A+ L A +S V+ LI+GF +AV+ ++S I Sbjct: 9 EWLANLVELLGMAWPFLLQGAMYTVL-FAAVSMVLGLILGFSVAVV-RVTKVPVVSQIAA 66 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV FRGTPLLVQ+FV++YGLP +GI F A I++LTLN +AY+SE +R +I+ I K Sbjct: 67 VYVSAFRGTPLLVQIFVLYYGLPSVGIEFTPVTAGILALTLNVAAYLSESMRGAILGIDK 126 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A ++GLT QT+ +II PQ + + LS+ IS++K TS+ S IT+ E+ + Sbjct: 127 GQWEAGLSVGLTWGQTLWNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATK 186 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 +++ T+QPL +Y A +Y +L++ +Q +E+ +T Sbjct: 187 EVIAETFQPLPLYLAAAGIYWLLSALFERVQKALENRLT 225 >gi|146296045|ref|YP_001179816.1| polar amino acid ABC transporter, inner membrane subunit [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409621|gb|ABP66625.1| amino acid ABC transporter membrane protein, PAAT family [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 220 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 89/200 (44%), Positives = 132/200 (66%), Gaps = 4/200 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+II FP LL A+ VVT+ + I+ I L+ G A+ RI I++LI FYVW+FR Sbjct: 4 NVIIKYFPVLLKAS-VVTIELTAIAVTIGLVFGLIAALFRIS-KLKILNLIGSFYVWLFR 61 Query: 67 GTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 GTPLL+Q+F I+YGLP I + +F+A I+L +N AY +EIIR++I+SI KGQ++A Sbjct: 62 GTPLLLQIFFIYYGLPKIIPALTLPAFLAGAIALIINSGAYTAEIIRAAILSIDKGQYEA 121 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+T QT+R++I+PQT P+ +EFI++LK +S+ STI + E+ + AQ S Sbjct: 122 AKALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRAAQLKASQ 181 Query: 185 TYQPLIIYCELAFVYLILTS 204 T + IY +YL LT+ Sbjct: 182 TGRDAEIYIAALIIYLALTT 201 >gi|121594464|ref|YP_986360.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax sp. JS42] gi|120606544|gb|ABM42284.1| amino acid ABC transporter membrane protein, PAAT family [Acidovorax sp. JS42] Length = 230 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 86/219 (39%), Positives = 138/219 (63%), Gaps = 6/219 (2%) Query: 4 EWFNLIID----SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 EW +++ ++P LL A+ L A +S V+ L++GF +AV+ ++S I Sbjct: 9 EWLANLVELLGMAWPFLLQGAMYTVL-FAAVSMVLGLVLGFSVAVV-RVTKVPVVSQIAA 66 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV FRGTPLLVQ+FV++YGLP +GI F A I++LTLN +AY+SE +R +I+ I K Sbjct: 67 VYVSAFRGTPLLVQIFVLYYGLPSVGIEFTPVTAGILALTLNVAAYLSESMRGAILGIDK 126 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A ++GLT QT+ +II PQ + + LS+ IS++K TS+ S IT+ E+ + Sbjct: 127 GQWEAGLSVGLTWGQTLWNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATK 186 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 +++ T+QPL +Y A +Y +L++ +Q +E+ +T Sbjct: 187 EVIAETFQPLPLYLAAAGIYWLLSALFERVQKALENRLT 225 >gi|53719481|ref|YP_108467.1| putative ABC transporter membrane protein [Burkholderia pseudomallei K96243] gi|53723465|ref|YP_102926.1| amino acid ABC transporter permease [Burkholderia mallei ATCC 23344] gi|121598882|ref|YP_993060.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Burkholderia mallei SAVP1] gi|126441429|ref|YP_001058844.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Burkholderia pseudomallei 668] gi|126449548|ref|YP_001080332.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Burkholderia mallei NCTC 10247] gi|126452898|ref|YP_001066090.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Burkholderia pseudomallei 1106a] gi|167719754|ref|ZP_02402990.1| amino acid ABC transporter, permease protein [Burkholderia pseudomallei DM98] gi|167738749|ref|ZP_02411523.1| amino acid ABC transporter, permease protein [Burkholderia pseudomallei 14] gi|167815973|ref|ZP_02447653.1| amino acid ABC transporter, permease protein [Burkholderia pseudomallei 91] gi|167824346|ref|ZP_02455817.1| amino acid ABC transporter, permease protein [Burkholderia pseudomallei 9] gi|167845888|ref|ZP_02471396.1| amino acid ABC transporter, permease protein [Burkholderia pseudomallei B7210] gi|167894458|ref|ZP_02481860.1| amino acid ABC transporter, permease protein [Burkholderia pseudomallei 7894] gi|167902859|ref|ZP_02490064.1| amino acid ABC transporter, permease protein [Burkholderia pseudomallei NCTC 13177] gi|167911102|ref|ZP_02498193.1| amino acid ABC transporter, permease protein [Burkholderia pseudomallei 112] gi|167919122|ref|ZP_02506213.1| amino acid ABC transporter, permease protein [Burkholderia pseudomallei BCC215] gi|226196344|ref|ZP_03791926.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237812102|ref|YP_002896553.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei MSHR346] gi|242316328|ref|ZP_04815344.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1106b] gi|254179932|ref|ZP_04886531.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1655] gi|254188663|ref|ZP_04895174.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254197266|ref|ZP_04903688.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei S13] gi|254260445|ref|ZP_04951499.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1710a] gi|52209895|emb|CAH35867.1| putative ABC transport system, membrane protein [Burkholderia pseudomallei K96243] gi|52426888|gb|AAU47481.1| amino acid ABC transporter, permease protein [Burkholderia mallei ATCC 23344] gi|121227692|gb|ABM50210.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei SAVP1] gi|126220922|gb|ABN84428.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 668] gi|126226540|gb|ABN90080.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1106a] gi|126242418|gb|ABO05511.1| cystine ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|157936342|gb|EDO92012.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|169654007|gb|EDS86700.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei S13] gi|184210472|gb|EDU07515.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1655] gi|225931561|gb|EEH27566.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237504828|gb|ACQ97146.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei MSHR346] gi|242139567|gb|EES25969.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1106b] gi|254219134|gb|EET08518.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1710a] Length = 219 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 133/204 (65%), Gaps = 5/204 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L+ S P LL A++ T+ A +S + L+ +A++ I S + L YV + R Sbjct: 5 SLLAQSLPVLLQGALL-TVKFAVLSMLFGLVGAVALALMGIGRSRVLAGL-ARAYVSVMR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+FV++YGLP +G+ D A +I+L+ N +AY+SE +R +I I KGQW A+Y Sbjct: 63 GTPLLVQIFVVYYGLPSLGVSLDPTPAGVIALSANVAAYMSESMRGAINGIDKGQWLAAY 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ +QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ ++AQ I+++TY Sbjct: 123 SLGLSWRQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTY 182 Query: 187 QPLIIYCELAFVYLILTSFCYIIQ 210 QPL +Y A VY +L C I++ Sbjct: 183 QPLPLYLAAAAVYWVL---CQILE 203 >gi|91788992|ref|YP_549944.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91698217|gb|ABE45046.1| amino acid ABC transporter membrane protein, PAAT family [Polaromonas sp. JS666] Length = 222 Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 126/208 (60%), Gaps = 2/208 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L+ D+ P +L A TL +A S IIG F+A+ R+ + + YV R Sbjct: 8 QLLGDALPLMLKGA-AWTLLLAVASVFFGAIIGTFVAITRLAKMPGL-ARFAALYVSCMR 65 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQLFVI++GLP IGI FD A I+ L+LN AY+SE IR +I + GQW+A+ Sbjct: 66 GTPLLVQLFVIYFGLPSIGIQFDPITAGILGLSLNVGAYLSETIRGAINGVEHGQWNAAR 125 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GLT+ QT+RH+I PQ + + LS+ IS++K TS+ S I + E+ + +++TT+ Sbjct: 126 SLGLTQAQTLRHVIGPQALRLAVPSLSNSLISLIKDTSLVSVIAVGELMLATKEVIATTF 185 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIE 214 QP +Y A +Y +++ +Q K+E Sbjct: 186 QPFPLYLAAAAIYWAMSASFETLQKKLE 213 >gi|76808570|ref|YP_333373.1| amino acid ABC transporter permease [Burkholderia pseudomallei 1710b] gi|124383656|ref|YP_001026395.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Burkholderia mallei NCTC 10229] gi|134282373|ref|ZP_01769078.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 305] gi|254178565|ref|ZP_04885220.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei ATCC 10399] gi|254206196|ref|ZP_04912548.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei JHU] gi|254297764|ref|ZP_04965217.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 406e] gi|254358594|ref|ZP_04974867.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei 2002721280] gi|76578023|gb|ABA47498.1| amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1710b] gi|124291676|gb|ABN00945.1| cystine ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|134246411|gb|EBA46500.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 305] gi|147753639|gb|EDK60704.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei JHU] gi|148027721|gb|EDK85742.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei 2002721280] gi|157807961|gb|EDO85131.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 406e] gi|160699604|gb|EDP89574.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei ATCC 10399] Length = 230 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 133/204 (65%), Gaps = 5/204 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L+ S P LL A++ T+ A +S + L+ +A++ I S + L YV + R Sbjct: 16 SLLAQSLPVLLQGALL-TVKFAVLSMLFGLVGAVALALMGIGRSRVLAGL-ARAYVSVMR 73 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+FV++YGLP +G+ D A +I+L+ N +AY+SE +R +I I KGQW A+Y Sbjct: 74 GTPLLVQIFVVYYGLPSLGVSLDPTPAGVIALSANVAAYMSESMRGAINGIDKGQWLAAY 133 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ +QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ ++AQ I+++TY Sbjct: 134 SLGLSWRQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTY 193 Query: 187 QPLIIYCELAFVYLILTSFCYIIQ 210 QPL +Y A VY +L C I++ Sbjct: 194 QPLPLYLAAAAVYWVL---CQILE 214 >gi|242372074|ref|ZP_04817648.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis M23864:W1] gi|242350186|gb|EES41787.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis M23864:W1] Length = 239 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 90/211 (42%), Positives = 132/211 (62%), Gaps = 14/211 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++F++ LII F A++RI S I+ I YV I RGTP+ Sbjct: 18 QAFGPMLEGLVKYSIPITIVTFILGLIIALFTALMRISTSK-ILRGIARVYVSIIRGTPM 76 Query: 71 LVQLFVIFYGLPHIG--IVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G I D+ VA II L+ N AY SEIIR IISIPKG Sbjct: 77 IVQLFIIFYGIPELGRLITNDADNQWTLAPVVAAIIGLSFNVGAYASEIIRGGIISIPKG 136 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+ +QT++ IILPQ I S L + F+ ++K TS+ I + E+F+ AQ Sbjct: 137 QTEAAYSIGMNYRQTVQRIILPQAIRVSIPALGNTFLGLIKDTSLLGFILVAEMFRKAQE 196 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + ST+Y+ L IY +A +Y ++ C+II I Sbjct: 197 VASTSYEYLTIYILVAIMYWVV---CFIISI 224 >gi|170016650|ref|YP_001727569.1| amino acid ABC transporter permease [Leuconostoc citreum KM20] gi|169803507|gb|ACA82125.1| Amino acid ABC transporter, permease protein [Leuconostoc citreum KM20] Length = 232 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 92/222 (41%), Positives = 137/222 (61%), Gaps = 11/222 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF---------FSDTII 54 ++ NL I P++L AA+ T+P+ ISF +++I AVIRI + II Sbjct: 3 DFINLAIKYLPEILRAALFYTIPLTIISFTLAIIFAVITAVIRIMKLPKSPIIRWLTLII 62 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLP--HIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 + FYVW+FR TP++VQLF++FYGLP HI + +++VA I +LN AY +E IR+ Sbjct: 63 KSMASFYVWLFRSTPMIVQLFIVFYGLPNAHITLFANAWVAAITVFSLNTGAYAAESIRA 122 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I S+P Q +A+ ++G++ Q RHIILPQ S PLS+ IS+LK TS+AS ITI Sbjct: 123 AITSVPAVQKEAAESLGMSPFQVYRHIILPQAARISIPPLSNSLISLLKDTSLASVITIV 182 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 E+F +Q+I + Y+ L +Y +A VY +T+ I Q +E Sbjct: 183 EMFYLSQQIAAENYKILSMYLLVALVYAAMTTILSIGQHYLE 224 >gi|238563299|ref|ZP_00439085.2| cystine ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|251768162|ref|ZP_02269699.2| cystine ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|254199868|ref|ZP_04906234.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei FMH] gi|147749464|gb|EDK56538.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei FMH] gi|238520964|gb|EEP84419.1| cystine ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|243060612|gb|EES42798.1| cystine ABC transporter, permease protein [Burkholderia mallei PRL-20] Length = 240 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 133/204 (65%), Gaps = 5/204 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L+ S P LL A++ T+ A +S + L+ +A++ I S + L YV + R Sbjct: 26 SLLAQSLPVLLQGALL-TVKFAVLSMLFGLVGAVALALMGIGRSRVLAGL-ARAYVSVMR 83 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+FV++YGLP +G+ D A +I+L+ N +AY+SE +R +I I KGQW A+Y Sbjct: 84 GTPLLVQIFVVYYGLPSLGVSLDPTPAGVIALSANVAAYMSESMRGAINGIDKGQWLAAY 143 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ +QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ ++AQ I+++TY Sbjct: 144 SLGLSWRQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTY 203 Query: 187 QPLIIYCELAFVYLILTSFCYIIQ 210 QPL +Y A VY +L C I++ Sbjct: 204 QPLPLYLAAAAVYWVL---CQILE 224 >gi|223042510|ref|ZP_03612559.1| L-cystine transport system permease protein TcyB [Staphylococcus capitis SK14] gi|222444173|gb|EEE50269.1| L-cystine transport system permease protein TcyB [Staphylococcus capitis SK14] Length = 239 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 89/211 (42%), Positives = 132/211 (62%), Gaps = 14/211 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++F++ L+I F A++RI S I+ I YV I RGTP+ Sbjct: 18 QAFGPMLEGLVKYSIPITIVTFILGLVIALFTALMRISTSK-ILRGIARVYVSIIRGTPM 76 Query: 71 LVQLFVIFYGLPHIG--IVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G I D+ VA II L+ N AY SEIIR IISIPKG Sbjct: 77 IVQLFIIFYGIPELGRLITNDADNQWTLAPVVAAIIGLSFNVGAYASEIIRGGIISIPKG 136 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+ +QT++ IILPQ I S L + F+ ++K TS+ I + E+F+ AQ Sbjct: 137 QTEAAYSIGMNYRQTVQRIILPQAIRVSIPALGNTFLGLIKDTSLLGFILVAEMFRKAQE 196 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + ST+Y+ L IY +A +Y ++ C+II I Sbjct: 197 VASTSYEYLTIYILVAIMYWVV---CFIISI 224 >gi|217423525|ref|ZP_03455026.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 576] gi|217393383|gb|EEC33404.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 576] Length = 240 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 133/204 (65%), Gaps = 5/204 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L+ S P LL A++ T+ A +S + L+ +A++ I S + L YV + R Sbjct: 26 SLLAQSLPVLLQGALL-TVKFAVLSMLFGLVGAVALALMGIGRSRVLAGL-ARAYVSVMR 83 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+FV++YGLP +G+ D A +I+L+ N +AY+SE +R +I I KGQW A+Y Sbjct: 84 GTPLLVQIFVVYYGLPSLGVSLDPTPAGVIALSANVAAYMSESMRGAINGIDKGQWLAAY 143 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ +QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ ++AQ I+++TY Sbjct: 144 SLGLSWRQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTY 203 Query: 187 QPLIIYCELAFVYLILTSFCYIIQ 210 QPL +Y A VY +L C I++ Sbjct: 204 QPLPLYLAAAAVYWVL---CQILE 224 >gi|312796581|ref|YP_004029503.1| cystine transport system permease protein [Burkholderia rhizoxinica HKI 454] gi|312168356|emb|CBW75359.1| Cystine transport system permease protein [Burkholderia rhizoxinica HKI 454] Length = 219 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 78/191 (40%), Positives = 122/191 (63%), Gaps = 1/191 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ A +S L G IA++ I +S YV I RGTPLLVQ+FV++YGLP Sbjct: 21 TIKFALLSMAFGLAGGMSIALMSISERRWPVS-AARAYVSIMRGTPLLVQIFVVYYGLPS 79 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +GI D A +++L+ N SAY+SE +R +I+ I +GQW A+Y++GL+R+QT+R+++ PQ Sbjct: 80 VGIELDPTPAGVLALSANVSAYLSESMRGAILGIARGQWLAAYSLGLSRQQTLRYVVGPQ 139 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + LS+ IS++K TS+ S IT+ E+ +AQ +++ TYQPL +Y A VY +L Sbjct: 140 ALRIAVPSLSNSLISLVKDTSLVSVITVTELLHSAQEVIAATYQPLPLYVGAASVYWVLC 199 Query: 204 SFCYIIQIKIE 214 +Q ++E Sbjct: 200 HLLEGLQHRLE 210 >gi|187780000|ref|ZP_02996473.1| hypothetical protein CLOSPO_03596 [Clostridium sporogenes ATCC 15579] gi|187773625|gb|EDU37427.1| hypothetical protein CLOSPO_03596 [Clostridium sporogenes ATCC 15579] Length = 215 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 83/198 (41%), Positives = 130/198 (65%), Gaps = 2/198 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+I P L+ +I+ T+ + IS + IIG +A++++ ++ ++ + FY WIFR Sbjct: 4 NIIKQITPVLIKGSII-TIELTAISVCLGSIIGIIVALLKLC-NNKLVFYVGGFYTWIFR 61 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QLF I+YGLP +GI F F A I+ L+LN AY +EIIR IIS+ KGQ++A Sbjct: 62 GTPLLLQLFFIYYGLPFVGIKFTPFSAAILGLSLNAGAYTAEIIRGGIISVDKGQFEACR 121 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G T++ I+LPQT L +EFI++LK TS+ STI + E+ ++AQ + S+T+ Sbjct: 122 ALGFNYFHTMKKIVLPQTFKIIIPSLGNEFITMLKDTSLVSTIAMVEVMRSAQLLYSSTF 181 Query: 187 QPLIIYCELAFVYLILTS 204 +P+ + A +YLI+T+ Sbjct: 182 KPMETFILTAVLYLIMTT 199 >gi|314934479|ref|ZP_07841838.1| amino acid ABC transporter, permease protein [Staphylococcus caprae C87] gi|313652409|gb|EFS16172.1| amino acid ABC transporter, permease protein [Staphylococcus caprae C87] Length = 239 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 89/211 (42%), Positives = 131/211 (62%), Gaps = 14/211 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L + ++PI ++F++ L I F A++RI S I+ I YV I RGTP+ Sbjct: 18 QAFGPMLEGLVKYSIPITIVTFILGLAIALFTALMRISTSK-ILRGIARVYVSIIRGTPM 76 Query: 71 LVQLFVIFYGLPHIG--IVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +VQLF+IFYG+P +G I D+ VA II L+ N AY SEIIR IISIPKG Sbjct: 77 IVQLFIIFYGIPELGRLITNDADNQWTLAPVVAAIIGLSFNVGAYASEIIRGGIISIPKG 136 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG+ +QT++ IILPQ I S L + F+ ++K TS+ I + E+F+ AQ Sbjct: 137 QTEAAYSIGMNYRQTVQRIILPQAIRVSIPALGNTFLGLIKDTSLLGFILVAEMFRKAQE 196 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + ST+Y+ L IY +A +Y ++ C+II I Sbjct: 197 VASTSYEYLTIYILVAIMYWVV---CFIISI 224 >gi|289803650|ref|ZP_06534279.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 189 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 75/185 (40%), Positives = 120/185 (64%), Gaps = 1/185 (0%) Query: 36 LIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII 95 +++GF +A++R+ + + FY+ IFRGTPL+ QLF+I+YGLP GI D A + Sbjct: 1 MLLGFVLALMRMS-PLWPVRWLARFYISIFRGTPLIAQLFMIYYGLPQFGIELDPIPAAM 59 Query: 96 ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSE 155 I L+LN +AY SE +R++I +I KGQW+A+ +IG+T QT+R ILPQ + PLS+ Sbjct: 60 IGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNS 119 Query: 156 FISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 FIS++K TS+A+TI +PE+F+ AQ I S T + +Y + +Y ++ + +Q E+ Sbjct: 120 FISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFEN 179 Query: 216 SVTQH 220 + + Sbjct: 180 QLNRQ 184 >gi|167836762|ref|ZP_02463645.1| amino acid ABC transporter, permease protein [Burkholderia thailandensis MSMB43] Length = 219 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 82/212 (38%), Positives = 133/212 (62%), Gaps = 2/212 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L+ S P LL A++ T+ A +S + L+ +A++ I + + L YV + R Sbjct: 5 SLLAQSLPVLLQGALL-TVKFAVLSMLFGLVGAVVLALMGIGGNRALAGL-ARAYVSVMR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+FV++YGLP +G+ D A +I+L+ N +AY+SE +R +I I KGQW A+Y Sbjct: 63 GTPLLVQIFVVYYGLPSLGVSLDPTPAGVIALSANVAAYMSESMRGAINGIDKGQWLAAY 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ +QT+ ++I PQ + + LS+ IS++K TS+ S IT+ E+ ++AQ I+++TY Sbjct: 123 SLGLSWRQTLHYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTY 182 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 QPL +Y A VY +L +Q E +T Sbjct: 183 QPLPLYLAAAGVYWVLCQILEWVQRWYEQRLT 214 >gi|312127065|ref|YP_003991939.1| polar amino acid ABC transporter inner membrane subunit [Caldicellulosiruptor hydrothermalis 108] gi|311777084|gb|ADQ06570.1| polar amino acid ABC transporter, inner membrane subunit [Caldicellulosiruptor hydrothermalis 108] Length = 220 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 87/200 (43%), Positives = 131/200 (65%), Gaps = 4/200 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+II FP LL A+ VVT+ + I+ I L+ G A+ RI +++ I FYVW+FR Sbjct: 4 NVIIKYFPVLLKAS-VVTIELTAIAVTIGLVFGLVAALFRIS-KIKVLNYIGSFYVWLFR 61 Query: 67 GTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 GTPLL+Q+F I+YGLP I + +F+A I+L +N AY +EIIR++I+SI KGQ++A Sbjct: 62 GTPLLLQIFFIYYGLPKIVPALTLPAFLAGAIALIINSGAYTAEIIRAAILSIDKGQYEA 121 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+T QT+R++I+PQT P+ +EFI++LK +S+ STI + E+ + AQ S Sbjct: 122 AKALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRAAQLKASA 181 Query: 185 TYQPLIIYCELAFVYLILTS 204 T + IY +YL LT+ Sbjct: 182 TGRDAEIYIAALVIYLALTT 201 >gi|222099044|ref|YP_002533612.1| Amino acid ABC transporter, permease protein [Thermotoga neapolitana DSM 4359] gi|221571434|gb|ACM22246.1| Amino acid ABC transporter, permease protein [Thermotoga neapolitana DSM 4359] Length = 216 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 78/200 (39%), Positives = 126/200 (63%), Gaps = 2/200 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EW +I+D+ P LL A+ TL + ++ +I L IG F+ + R+ II YV Sbjct: 3 EWLKVIVDNLPLLLKGALR-TLQLTSLAVLIGLAIGIFVGMGRLS-KYRIIRYPSSVYVE 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RGTPL+VQLF++++GLP +G+ FD F A +++L +N AY++EI+R+ I S+PKGQ++ Sbjct: 61 FIRGTPLMVQLFLVYFGLPELGLEFDRFTAAVVALGINSGAYVAEIVRAGIQSVPKGQYE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++G++ Q + H+ILPQ L +EFI++ K +S+A I E+ ++AQ IVS Sbjct: 121 AARSLGMSHFQAMVHVILPQAFRHILPALGNEFIALAKDSSLAMVIGTVELMRSAQYIVS 180 Query: 184 TTYQPLIIYCELAFVYLILT 203 T+ IY +A +Y +T Sbjct: 181 RTFMSFPIYGGVALIYFAIT 200 >gi|297618710|ref|YP_003706815.1| polar amino acid ABC transporter inner membrane subunit [Methanococcus voltae A3] gi|297377687|gb|ADI35842.1| polar amino acid ABC transporter, inner membrane subunit [Methanococcus voltae A3] Length = 220 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 80/202 (39%), Positives = 128/202 (63%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ +V+TL IA +SF+ ++II + ++R + ++ YV IFRG PLL+ LF Sbjct: 14 LFWGLVITLKIAFLSFIFAVIIAHIVGILRALNIPKPVDMLFRGYVEIFRGVPLLILLFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 I+YGLP IGIV D+ A ++ L+LN AYISEI+R+S++SIPKGQWDA ++G+++ Q++ Sbjct: 74 IYYGLPSIGIVMDNTTAAVLGLSLNGGAYISEIVRASLLSIPKGQWDACSSLGMSKVQSL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 ++I+PQTI S L + F +I+K +S+ S I I E+ + Q I + T P +Y +A Sbjct: 134 IYVIIPQTIRISMPSLMNSFSAIIKESSLVSVIAITELTRVGQLIYTKTSSPFEVYIVVA 193 Query: 197 FVYLILTSFCYIIQIKIESSVT 218 +YL + ++ IE + Sbjct: 194 IIYLSVIGMVSLLSDLIEKRLN 215 >gi|152968094|ref|YP_001363878.1| polar amino acid ABC transporter, inner membrane subunit [Kineococcus radiotolerans SRS30216] gi|151362611|gb|ABS05614.1| polar amino acid ABC transporter, inner membrane subunit [Kineococcus radiotolerans SRS30216] Length = 222 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 78/220 (35%), Positives = 130/220 (59%), Gaps = 1/220 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +L+ DS L + T+P+ SF I ++I +A++R+ S ++ I F Sbjct: 1 MDQSTLDLVRDSLVPLATGLVRGTIPLTIASFAIGMVIALVVALMRLS-SVLVLQGIARF 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + RGTPLLVQLF+I+Y LP G +D F + +++ +LN Y SE++R++I+S+P+G Sbjct: 60 YVSVIRGTPLLVQLFLIYYALPEFGATWDPFPSAVVAFSLNVGGYASEVVRAAILSVPRG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ IG+ T+R I+LPQ + PLS+ IS++K TS+AS+I + E+ + A Sbjct: 120 QTEAALTIGMNYPTTMRRIVLPQAARVAVPPLSNTLISLVKDTSLASSIQVVELLRKASE 179 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I + TY+ +Y A Y I+ Q ++E+ + +H Sbjct: 180 IAAPTYEFFALYSLAAVYYWIVCLVLSFGQTRVETRLNRH 219 >gi|254237453|ref|ZP_04930776.1| hypothetical protein PACG_03528 [Pseudomonas aeruginosa C3719] gi|126169384|gb|EAZ54895.1| hypothetical protein PACG_03528 [Pseudomonas aeruginosa C3719] Length = 230 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 86/219 (39%), Positives = 137/219 (62%), Gaps = 6/219 (2%) Query: 4 EWFNLIID----SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 EW +++ ++P LL A+ L A +S V+ LI+GF +AV+ ++S I Sbjct: 9 EWLANLVELLGMAWPFLLQGAMYTVL-FAAVSMVLGLILGFSVAVV-RVTKVPVVSQIAA 66 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV FRGTPLLVQ+FV++YGLP +GI F A I++LTLN +A +SE +R +I+ I K Sbjct: 67 VYVSAFRGTPLLVQIFVLYYGLPSVGIEFTPVTAGILALTLNVAASLSESMRGAILGIDK 126 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A ++GLT QT+ +II PQ + + LS+ IS++K TS+ S IT+ E+ + Sbjct: 127 GQWEAGLSVGLTWGQTLWNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATK 186 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 +++ T+QPL +Y A +Y +L++ +Q +E+ +T Sbjct: 187 EVIAETFQPLPLYLAAAGIYWLLSALFERVQKALENRLT 225 >gi|170288144|ref|YP_001738382.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga sp. RQ2] gi|281411812|ref|YP_003345891.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga naphthophila RKU-10] gi|170175647|gb|ACB08699.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga sp. RQ2] gi|281372915|gb|ADA66477.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga naphthophila RKU-10] Length = 216 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 78/200 (39%), Positives = 127/200 (63%), Gaps = 2/200 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EW ++I+D+ P LL A+ TL + ++ +I L IG F+ + R+ II YV Sbjct: 3 EWLSVIVDNLPLLLKGALS-TLQLTSLAVLIGLAIGIFVGMGRLS-KYRIIRYPSSVYVE 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RGTPL+VQLF++++GLP +G+ FD F A +I+L +N AY++EI+R+ I S+PKGQ++ Sbjct: 61 FLRGTPLMVQLFLVYFGLPELGLEFDRFTAAVIALGINSGAYVAEIVRAGIQSVPKGQYE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++G++ Q + ++ILPQ L +EFI++ K +S+A I E+ ++AQ IVS Sbjct: 121 AARSLGMSHAQAMIYVILPQAFRHILPALGNEFIALAKDSSLAMVIGTVELMRSAQYIVS 180 Query: 184 TTYQPLIIYCELAFVYLILT 203 T+ IY +A +Y +T Sbjct: 181 RTFMSFPIYGGVALIYFAIT 200 >gi|15643358|ref|NP_228402.1| amino acid ABC transporter, permease protein [Thermotoga maritima MSB8] gi|4981111|gb|AAD35677.1|AE001734_4 amino acid ABC transporter, permease protein [Thermotoga maritima MSB8] Length = 216 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 78/200 (39%), Positives = 127/200 (63%), Gaps = 2/200 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EW ++I+D+ P LL A+ TL + ++ +I L IG F+ + R+ II YV Sbjct: 3 EWLSVIVDNLPLLLKGALR-TLQLTSLAVLIGLAIGIFVGMGRLS-KYRIIRYPSSVYVE 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RGTPL+VQLF++++GLP +G+ FD F A +I+L +N AY++EI+R+ I S+PKGQ++ Sbjct: 61 FLRGTPLMVQLFLVYFGLPELGLEFDRFTAAVIALGINSGAYVAEIVRAGIQSVPKGQYE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++G++ Q + ++ILPQ L +EFI++ K +S+A I E+ ++AQ IVS Sbjct: 121 AARSLGMSHAQAMIYVILPQAFRHILPALGNEFIALAKDSSLAMVIGTVELMRSAQYIVS 180 Query: 184 TTYQPLIIYCELAFVYLILT 203 T+ IY +A +Y +T Sbjct: 181 RTFMSFPIYGGVALIYFAIT 200 >gi|78066164|ref|YP_368933.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia sp. 383] gi|206559973|ref|YP_002230737.1| binding-protein-dependent transport system inner membrane protein [Burkholderia cenocepacia J2315] gi|77966909|gb|ABB08289.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia sp. 383] gi|198036014|emb|CAR51907.1| binding-protein-dependent transport system inner membrane protein [Burkholderia cenocepacia J2315] Length = 230 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 84/214 (39%), Positives = 134/214 (62%), Gaps = 14/214 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----------ISL 56 +L++ S P L A V+T+ A +S V L+ +A++ I S+ + ++ Sbjct: 5 SLLVQSLPVLAQGA-VLTVKFAVLSMVFGLLGAVVLAMMGIRQSEALDGFERIWVNALAW 63 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV + RGTPLLVQ+FVI+YGLP +GI D A +I+L+ N +AY+SE +R +I Sbjct: 64 LARAYVSLMRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAING 123 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQW A+Y++GL+ QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ + Sbjct: 124 IARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLR 183 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 +AQ +++ TYQPL +Y A VY IL C I++ Sbjct: 184 SAQEVIAATYQPLPLYLAAAAVYWIL---CQILE 214 >gi|15805592|ref|NP_294288.1| amino acid ABC transporter permease [Deinococcus radiodurans R1] gi|6458260|gb|AAF10145.1|AE001914_7 amino acid ABC transporter, permease protein [Deinococcus radiodurans R1] Length = 226 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 88/218 (40%), Positives = 135/218 (61%), Gaps = 6/218 (2%) Query: 1 MKYEWFNLIIDS----FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 M E I+ S P LL AA VTL A + V+ L +GF +A+ R+ + +L Sbjct: 1 MNTEQLQSILQSAWHALPTLL-AATPVTLGFALAAMVLGLPLGFAVALARLSRLGWLRTL 59 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +V RGTPLLVQ+FVI+YGLP +GI F V +I+LTLN +AY+SE IR++I+S Sbjct: 60 -SGLFVSFIRGTPLLVQIFVIYYGLPSLGIQFSPVVGGVIALTLNAAAYLSETIRAAILS 118 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP GQ +A+ ++GL+ QT+R IILPQ + LS+ I ++K TS+ S IT+ E+ + Sbjct: 119 IPPGQREAATSLGLSGAQTMRLIILPQAARVALPSLSNTLIGLVKDTSLVSVITVVELLR 178 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 +AQ +++ T++P Y A +Y +++S ++Q +E Sbjct: 179 SAQLVIARTFEPFGPYLAAALIYWLVSSLLEVVQRALE 216 >gi|148269470|ref|YP_001243930.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga petrophila RKU-1] gi|147735014|gb|ABQ46354.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga petrophila RKU-1] Length = 216 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 77/200 (38%), Positives = 127/200 (63%), Gaps = 2/200 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EW ++I+D+ P LL A+ TL + ++ +I L IG F+ + R+ II YV Sbjct: 3 EWLSVIVDNLPLLLKGALR-TLQLTSLAVLIGLAIGIFVGMGRLS-KYRIIRYPSSIYVE 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RGTPL+VQLF++++GLP +G+ FD F A +++L +N AY++EI+R+ I S+PKGQ++ Sbjct: 61 FLRGTPLMVQLFLVYFGLPELGLEFDRFTAAVVALGINSGAYVAEIVRAGIQSVPKGQYE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++G++ Q + ++ILPQ L +EFI++ K +S+A I E+ ++AQ IVS Sbjct: 121 AARSLGMSHAQAMIYVILPQAFRHILPALGNEFIALAKDSSLAMVIGTVELMRSAQYIVS 180 Query: 184 TTYQPLIIYCELAFVYLILT 203 T+ IY +A +Y +T Sbjct: 181 RTFMSFPIYGGVALIYFAIT 200 >gi|170732878|ref|YP_001764825.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169816120|gb|ACA90703.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 230 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 83/214 (38%), Positives = 134/214 (62%), Gaps = 14/214 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----------ISL 56 +L++ S P L A V+T+ A +S V L+ +A++ I S+ + ++ Sbjct: 5 SLLVQSLPVLAQGA-VLTVKFAVLSMVFGLLGAVVLAMMGIRQSEALDGFERIWVNALAW 63 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV + RGTPLLVQ+FVI+YGLP +GI D A +I+L+ N +AY+SE +R +I Sbjct: 64 LARAYVSLMRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAING 123 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQW A+Y++GL+ QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ + Sbjct: 124 IARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLR 183 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 +AQ +++ TYQPL +Y A VY +L C I++ Sbjct: 184 SAQEVIAATYQPLPLYLAAAAVYWVL---CQILE 214 >gi|116689574|ref|YP_835197.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|116647663|gb|ABK08304.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 230 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 83/214 (38%), Positives = 134/214 (62%), Gaps = 14/214 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----------ISL 56 +L++ S P L A V+T+ A +S V L+ +A++ I S+ + ++ Sbjct: 5 SLLVQSLPVLAQGA-VLTVKFAVLSMVFGLLGAVVLAMMGIRQSEALDGFERIWVNALAW 63 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV + RGTPLLVQ+FVI+YGLP +GI D A +I+L+ N +AY+SE +R +I Sbjct: 64 LARAYVSLMRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAING 123 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQW A+Y++GL+ QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ + Sbjct: 124 IARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLR 183 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 +AQ +++ TYQPL +Y A VY +L C I++ Sbjct: 184 SAQEVIAATYQPLPLYLAAAAVYWVL---CQILE 214 >gi|171317514|ref|ZP_02906704.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171097343|gb|EDT42188.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 230 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 83/214 (38%), Positives = 134/214 (62%), Gaps = 14/214 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----------ISL 56 +L++ S P L A V+T+ A +S V L+ +A++ I S+ + ++ Sbjct: 5 SLLVQSLPVLAQGA-VLTVKFAVLSMVFGLLGAVMLAMMGIRQSEPLEGFERIWVNALAW 63 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV + RGTPLLVQ+FVI+YGLP +GI D A +I+L+ N +AY+SE +R +I Sbjct: 64 LARAYVSLMRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAING 123 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQW A+Y++GL+ QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ + Sbjct: 124 IARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLR 183 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 +AQ +++ TYQPL +Y A VY +L C I++ Sbjct: 184 SAQEVIAATYQPLPLYLAAAAVYWVL---CQILE 214 >gi|326693557|ref|ZP_08230562.1| amino acid ABC transporter permease [Leuconostoc argentinum KCTC 3773] Length = 232 Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 85/213 (39%), Positives = 131/213 (61%), Gaps = 11/213 (5%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI---------ISLIMHFYVW 63 PQL AA++ TLP+ ISF ++L+ A+IR+ + +I FYVW Sbjct: 12 LPQLFRAALIYTLPLTIISFALALVFAVITALIRLAKLPAAPIPRLLLRGLKVIAGFYVW 71 Query: 64 IFRGTPLLVQLFVIFYGLP--HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 +FR TP++VQLF++FYGLP H+ + +++++ I +LN AY SE +R++I S+P+ Q Sbjct: 72 LFRSTPMIVQLFIVFYGLPSAHVTLFANAWLSAITVFSLNTGAYASESVRAAISSVPRVQ 131 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++G+ R Q +ILPQ S PLS+ I +LK TS+AS ITI E+F +Q+I Sbjct: 132 IEAAESLGMNRWQVFADVILPQAARISIPPLSNALIGLLKDTSLASVITIVEMFYLSQQI 191 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + YQ L +Y AFVY +LT+ I Q ++E Sbjct: 192 AAENYQILTMYILAAFVYAVLTTILSIAQHQLE 224 >gi|170698704|ref|ZP_02889770.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170136408|gb|EDT04670.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 259 Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 83/214 (38%), Positives = 134/214 (62%), Gaps = 14/214 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----------ISL 56 +L++ S P L A V+T+ A +S V L+ +A++ I S+ + ++ Sbjct: 34 SLLVQSLPVLAQGA-VLTVKFAVLSMVFGLLGAVMLAMMGIRQSERLEGFERIWVNALAW 92 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV + RGTPLLVQ+FVI+YGLP +GI D A +I+L+ N +AY+SE +R +I Sbjct: 93 LARAYVSLMRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAING 152 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQW A+Y++GL+ QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ + Sbjct: 153 IARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLR 212 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 +AQ +++ TYQPL +Y A VY +L C I++ Sbjct: 213 SAQEVIAATYQPLPLYLAAAAVYWVL---CQILE 243 >gi|56413133|ref|YP_150208.1| ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362059|ref|YP_002141696.1| ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127390|gb|AAV76896.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093536|emb|CAR58998.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 222 Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 87/217 (40%), Positives = 137/217 (63%), Gaps = 2/217 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E L+I+S P LL A V TL ++ + L++GF +A++R+ ++ + FY+ Sbjct: 3 ESIQLVIESLPYLLKGA-VFTLQLSIGGMFLGLLLGFVLALMRMS-PLWLVRWLARFYIS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I +I KGQW+ Sbjct: 61 IFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISAIDKGQWE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I S Sbjct: 121 AAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T + +Y + +Y ++ + +Q E+ + + Sbjct: 181 RTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQ 217 >gi|325517961|gb|EGC97785.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. TJI49] Length = 230 Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 83/214 (38%), Positives = 134/214 (62%), Gaps = 14/214 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----------ISL 56 +L++ S P L A V+T+ A +S V L+ +A++ I S+ + ++ Sbjct: 5 SLLVQSLPVLAQGA-VLTVKFAVLSMVFGLLGAVVLAMMGIRQSEALEGFERIWVNALAW 63 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV + RGTPLLVQ+FVI+YGLP +GI D A +I+L+ N +AY+SE +R +I Sbjct: 64 LARAYVSLMRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAING 123 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQW A+Y++GL+ QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ + Sbjct: 124 IARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLR 183 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 +AQ +++ TYQPL +Y A VY +L C I++ Sbjct: 184 SAQEMIAATYQPLPLYLAAAAVYWVL---CQILE 214 >gi|296132383|ref|YP_003639630.1| polar amino acid ABC transporter, inner membrane subunit [Thermincola sp. JR] gi|296030961|gb|ADG81729.1| polar amino acid ABC transporter, inner membrane subunit [Thermincola potens JR] Length = 220 Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 85/203 (41%), Positives = 126/203 (62%), Gaps = 3/203 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 MK++ F +I + P + AA +TL + ISF+++L+IG V R I + I Sbjct: 1 MKWDQFIIIWQNAPDFI-AATGMTLSVTVISFLLALVIGAGTGVART--GRNIFNPIFQV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV IFRGTPLL+QLF I+YGLP GI +F A + L LN AYISEIIR+++++I G Sbjct: 58 YVEIFRGTPLLIQLFFIYYGLPEAGIAMPAFTAAVTGLGLNGGAYISEIIRAAVLAIDPG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+GLTR QT+R++I PQ + + PL + F S+LK +S+ S + I EI + Q Sbjct: 118 QQEAALALGLTRLQTLRYVIFPQAVRIAVPPLMNTFSSMLKESSLVSVLAICEISRLGQL 177 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I + T++ +Y + +Y LT Sbjct: 178 IYTRTFRAFEVYLVVGAIYFCLT 200 >gi|167587290|ref|ZP_02379678.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ubonensis Bu] Length = 231 Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 85/215 (39%), Positives = 132/215 (61%), Gaps = 15/215 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS----------- 55 +L++ S P L A +T+ A +S V L+ +A++ I SD I S Sbjct: 5 SLLVQSLPVLAQGA-GLTVKFAVLSMVFGLMGAVVLAMMGIRQSDGITSGFERVVVNTLA 63 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + YV + RGTPLLVQ+FVI+YGLP +GI D A +I+L+ N +AY+SE +R +I Sbjct: 64 ALARAYVSVMRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAIN 123 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 I +GQW A+Y++GL+ QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ Sbjct: 124 GIHRGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELL 183 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 ++AQ +++ TYQPL +Y A VY +L C I++ Sbjct: 184 RSAQEVIAATYQPLPLYLAAAAVYWVL---CQILE 215 >gi|213614416|ref|ZP_03371242.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 178 Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 81/178 (45%), Positives = 118/178 (66%), Gaps = 2/178 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E L+I+S P LL A V TL ++ L++GF +A++R+ + + FY+ Sbjct: 3 ESIQLVIESLPYLLKGA-VFTLQLSIGGMFFGLLLGFVLALMRMS-PLWPVRWLARFYIS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I +I KGQW+ Sbjct: 61 IFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISAIDKGQWE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 121 AAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLI 178 >gi|115351506|ref|YP_773345.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria AMMD] gi|172060525|ref|YP_001808177.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria MC40-6] gi|115281494|gb|ABI87011.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia ambifaria AMMD] gi|171993042|gb|ACB63961.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 259 Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 83/214 (38%), Positives = 134/214 (62%), Gaps = 14/214 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----------ISL 56 +L++ S P L A V+T+ A +S V L+ +A++ I S+ + ++ Sbjct: 34 SLLVQSLPVLAQGA-VLTVKFAVLSMVFGLLGAVMLAMMGIRQSEPLEGFERIWVNALAW 92 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV + RGTPLLVQ+FVI+YGLP +GI D A +I+L+ N +AY+SE +R +I Sbjct: 93 LARAYVSLMRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAING 152 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQW A+Y++GL+ QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ + Sbjct: 153 IARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLR 212 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 +AQ +++ TYQPL +Y A VY +L C I++ Sbjct: 213 SAQEVIAATYQPLPLYLAAAAVYWVL---CQILE 243 >gi|91786938|ref|YP_547890.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91696163|gb|ABE42992.1| amino acid ABC transporter membrane protein, PAAT family [Polaromonas sp. JS666] Length = 222 Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 131/209 (62%), Gaps = 1/209 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I +PQLL A+V T+ I S ++ ++G + + R+ I+ + YV I Sbjct: 5 FSPIWSGWPQLLRGALV-TVEITAASLLLGCVMGLLVGIGRLNPRRRIVYGLCTAYVAII 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF++F+GLP GI+ +FV +I L + AY+SE++R +I SI +GQ +A+ Sbjct: 64 RGTPLLVQLFILFFGLPQFGILLPAFVCGVIGLGIYSGAYVSEVVRGAIQSIDRGQMEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IG++ +R ++LPQ + PL +EFI+++K++++ S +TI ++ Q+I+S + Sbjct: 124 RSIGMSSGLAMRAVVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISVS 183 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Y+ L +Y +A VY +LT ++ ++E Sbjct: 184 YRSLEVYLAIAVVYFVLTGATTLVLRRME 212 >gi|311279132|ref|YP_003941363.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] gi|308748327|gb|ADO48079.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] Length = 222 Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 88/219 (40%), Positives = 139/219 (63%), Gaps = 4/219 (1%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMHFY 61 +E +L+++S P LL A V TL ++ L++GF +A++R+ S + + + FY Sbjct: 2 HESIHLMLESAPYLLKGA-VFTLQLSVGGMFFGLLLGFLLALMRM--SPVLPVRWLARFY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I SI KGQ Sbjct: 59 ISIFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISSIDKGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ AQ I Sbjct: 119 WEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S T + +Y + +Y ++ + +Q E+ + + Sbjct: 179 TSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQ 217 >gi|241763925|ref|ZP_04761968.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] gi|241366820|gb|EER61252.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] Length = 222 Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 74/203 (36%), Positives = 126/203 (62%), Gaps = 1/203 (0%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 PQLL A VVT+ I S ++ ++G + + R+ ++ + YV RGTPLL Sbjct: 11 GLPQLLAGA-VVTVEITAASLLLGCVMGLLVGIGRLNPKRRVVYALCTAYVAAIRGTPLL 69 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 VQLF++F+GLP GI+ +FV +I L + AY+SE++R +I SI KGQ +A+ +IG++ Sbjct: 70 VQLFILFFGLPQFGILLPAFVCGVIGLGIYSGAYVSEVVRGAIQSIDKGQMEAARSIGMS 129 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 +R ++LPQ + PL +EFI+++K++++ S +TI ++ Q+I+S +Y+ L + Sbjct: 130 SGLAMRTVVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLEV 189 Query: 192 YCELAFVYLILTSFCYIIQIKIE 214 Y +A VY ILT ++ ++E Sbjct: 190 YLAIAVVYFILTGVTSLVLRRME 212 >gi|325507790|gb|ADZ19426.1| Amino acid (glutamine) ABC transporter, permease component [Clostridium acetobutylicum EA 2018] Length = 215 Score = 150 bits (380), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 81/215 (37%), Positives = 133/215 (61%), Gaps = 2/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN + P LL +V T+ + ++ + II +A++++ ++ ++ + FY WIF Sbjct: 3 FNTLDKVIPVLLRGTLV-TIKLTFMAIIFGCIIALLVAILKVS-ANKFLNAVGGFYTWIF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLL+QL+V +YGLP + I + A I+ L+LN AYI+EIIR II+I KGQ++AS Sbjct: 61 RGTPLLLQLYVFYYGLPALNINISATQAAILGLSLNSGAYIAEIIRGGIIAIDKGQFEAS 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G T QT+R +ILPQ + P+ +EFI+++K TS+ S IT+ E+ + AQ +VS++ Sbjct: 121 KALGFTYGQTMRKVILPQAVRVIIPPMGNEFIALIKDTSLVSVITMEELLRKAQLLVSSS 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + Y YL+LT+ + +IE ++ + Sbjct: 181 GDAVTPYVITGVFYLVLTTVFTFLFSRIEKKLSLY 215 >gi|28210297|ref|NP_781241.1| cystine/glutamine permease protein [Clostridium tetani E88] gi|28202733|gb|AAO35178.1| cystine/glutamine permease protein [Clostridium tetani E88] Length = 216 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 86/214 (40%), Positives = 133/214 (62%), Gaps = 3/214 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 NL+ + P LL A T+ + IS V+ +IG F+A++++ +++ + FY WI Sbjct: 3 MNLLKNIIP-LLIKATGRTIELTIISVVLGSLIGVFVALLKLS-KIKVLNGLASFYTWII 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTP+L+QL+ +YGLP + I + A II L+LN AY++EIIR IIS+ KGQ++A Sbjct: 61 RGTPMLLQLYFFYYGLPFLNIELSAMTAAIIGLSLNSGAYMAEIIRGGIISVDKGQFEAC 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI-TIPEIFQTAQRIVST 184 A+G + QT++ IILPQ + P +EFI+ILK TS+ S + + E+ + AQ+ S Sbjct: 121 KALGFSYGQTMKRIILPQAVRVLVPPTGNEFITILKDTSLVSVLGGMEEVMRVAQQSYSA 180 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 T++PL + A +YLILT+ I+ KIE V+ Sbjct: 181 TFRPLEPFLVAACIYLILTTVFTIVFGKIEKKVS 214 >gi|134295623|ref|YP_001119358.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia vietnamiensis G4] gi|134138780|gb|ABO54523.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia vietnamiensis G4] Length = 259 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 83/214 (38%), Positives = 133/214 (62%), Gaps = 14/214 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----------ISL 56 +L++ S P L A V+T+ A +S V L +A++ I S+ + ++ Sbjct: 34 SLLVQSLPVLAQGA-VLTVKFAVLSMVFGLFGAVVLAMMGIRQSEALEGFERIWVNALAW 92 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV + RGTPLLVQ+FVI+YGLP +GI D A +I+L+ N +AY+SE +R +I Sbjct: 93 LARGYVSLMRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAING 152 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQW A+Y++GL+ QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ + Sbjct: 153 IARGQWLAAYSLGLSWSQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLR 212 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 +AQ +++ TYQPL +Y A VY +L C I++ Sbjct: 213 SAQEVIAATYQPLPLYLAAAAVYWVL---CQILE 243 >gi|319945076|ref|ZP_08019338.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lautropia mirabilis ATCC 51599] gi|319741646|gb|EFV94071.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lautropia mirabilis ATCC 51599] Length = 224 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 128/216 (59%), Gaps = 2/216 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E +L+++S P LL A L + + ++ F+ + ++ I ++ FYV Sbjct: 3 ETLSLVLESLPDLLSGARFTVL--LSLGGMFFGLLLGFLLALGRLYARRPIQWLVRFYVS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTPLLVQLF+I+YGLP IG+ D A II +LN +AY E +R++I I GQW+ Sbjct: 61 FFRGTPLLVQLFIIYYGLPEIGLQLDPLPAAIIGFSLNTAAYTCETLRAAIAQIDAGQWE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++G+ R+ T+R II+PQ T+ PL + FI+++K TS+A+TI +PE+ + +Q I + Sbjct: 121 AAASLGMNRRHTLRRIIVPQAARTALPPLGNSFIALVKDTSLAATIQVPELLRQSQLITA 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ +Y A +Y + S +Q ++E + Sbjct: 181 RTFEVFAMYISAALIYWAIASILSALQARLERHTNR 216 >gi|213650338|ref|ZP_03380391.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 184 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 71/167 (42%), Positives = 109/167 (65%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + + FY+ IFRGTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++ Sbjct: 13 VRWLARFYISIFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAA 72 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I +I KGQW+A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE Sbjct: 73 ISAIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPE 132 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +F+ AQ I S T + +Y + +Y ++ + +Q E+ + + Sbjct: 133 LFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQ 179 >gi|332286234|ref|YP_004418145.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Pusillimonas sp. T7-7] gi|330430187|gb|AEC21521.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Pusillimonas sp. T7-7] Length = 220 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 81/212 (38%), Positives = 131/212 (61%), Gaps = 2/212 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +F+L++ + P LL TL A + L++GF +AV+RI S + YV Sbjct: 2 NFFDLMVLAGPILL-KGTGYTLIFAFSAMFGGLLVGFVLAVLRIIPSRWT-QIPATVYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQ+F+I+YGLP IGI FD A +++L+LN AYISE +R +I+ I +GQW Sbjct: 60 MMRGTPLLVQVFIIYYGLPSIGISFDPLTAGVLALSLNAGAYISESLRGAIVGISRGQWS 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A Y++GL Q + ++++PQ + + +S+ IS++K TS+ S IT+ E+ + +++ Sbjct: 120 AGYSLGLNYWQNLHYVVMPQALRLAVPSMSNSLISLIKDTSLVSVITVTELLLATKDVIA 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 TT+QPL +Y A +Y IL+ +Q ++E Sbjct: 180 TTFQPLPLYLAAAGIYWILSLCLEQVQARLEK 211 >gi|312792975|ref|YP_004025898.1| polar amino acid ABC transporter inner membrane subunit [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180115|gb|ADQ40285.1| polar amino acid ABC transporter, inner membrane subunit [Caldicellulosiruptor kristjanssonii 177R1B] Length = 220 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 85/200 (42%), Positives = 131/200 (65%), Gaps = 4/200 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++II FP LL A+ VVT+ + I+ I L+ G A+ RI +++ I FYVW+FR Sbjct: 4 SVIIKYFPVLLKAS-VVTIELTAIAVTIGLVFGLVAALFRIS-KIKVLNYIGSFYVWLFR 61 Query: 67 GTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 GTPLL+Q+F I+YGLP I + +F+A I+L +N AY +EIIR++I+SI +GQ++A Sbjct: 62 GTPLLLQIFFIYYGLPKIVPALTLPAFLAGAIALIINSGAYTAEIIRAAILSIDRGQYEA 121 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+T QT+R++I+PQT P+ +EFI++LK +S+ STI + E+ + AQ S Sbjct: 122 AKALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRAAQLKASA 181 Query: 185 TYQPLIIYCELAFVYLILTS 204 T + IY +YL LT+ Sbjct: 182 TGRDAEIYIAALVIYLALTT 201 >gi|45358114|ref|NP_987671.1| binding-protein dependent transport system inner membrane protein [Methanococcus maripaludis S2] gi|44920871|emb|CAF30107.1| Binding-protein-dependent transport systems inner membrane component [Methanococcus maripaludis S2] Length = 219 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 84/213 (39%), Positives = 131/213 (61%), Gaps = 1/213 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++ D+ P + A+ VTL I +SF++++II + R + L++ YV +F Sbjct: 3 FYIVFDNIP-FIIDAVFVTLKITIMSFLLAVIIAVLVGSTRAMNFSKTLDLVLMAYVEVF 61 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLL+QLF I+YGLP IGI S A ++ L+LN AYISEIIR++I S+P GQ++A+ Sbjct: 62 RGTPLLIQLFFIYYGLPSIGITMSSTFAAVLGLSLNGGAYISEIIRAAIQSVPVGQFEAA 121 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ + +++ +I+LPQ + PL + F SILK +S+ S + I E+ + Q I + T Sbjct: 122 ESLGMGKIESMVYIVLPQAFRITIPPLVNSFSSILKESSLISVLAITELTRIGQLIYTRT 181 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 +P IY + +YLIL S I KIE + Sbjct: 182 SRPFEIYLTIGLIYLILVSIISIGSWKIEKKLN 214 >gi|161524853|ref|YP_001579865.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189350397|ref|YP_001946025.1| polar amino acid transporter permease [Burkholderia multivorans ATCC 17616] gi|221213037|ref|ZP_03586013.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia multivorans CGD1] gi|160342282|gb|ABX15368.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189334419|dbj|BAG43489.1| polar amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] gi|221167250|gb|EED99720.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia multivorans CGD1] Length = 230 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 81/214 (37%), Positives = 133/214 (62%), Gaps = 14/214 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----------ISL 56 +L++ S P L A V+T+ A +S V L+ +A++ I + + ++ Sbjct: 5 SLLVQSLPVLAQGA-VLTVKFAVLSMVFGLLGAVVLAMMGIRQGEPLEGFERIWVNALAW 63 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV + RGTPLLVQ+FVI+YGLP +GI D A +I+L+ N +AY+SE +R +I Sbjct: 64 LARAYVSLMRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAING 123 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQW A+Y++GL+ QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ + Sbjct: 124 IARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLR 183 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 +AQ +++ TYQPL +Y A +Y +L C I++ Sbjct: 184 SAQEMIAATYQPLPLYLAAAAIYWVL---CQILE 214 >gi|302874468|ref|YP_003843101.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium cellulovorans 743B] gi|307690925|ref|ZP_07633371.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium cellulovorans 743B] gi|302577325|gb|ADL51337.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium cellulovorans 743B] Length = 216 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 82/198 (41%), Positives = 127/198 (64%), Gaps = 4/198 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +T+ + ++ VI + +G A++++ +++LI FY WIFRGTP+L+Q F ++ LP Sbjct: 19 ITIALTAVTIVIGITLGIIFALMKLS-KIKVLNLIASFYTWIFRGTPMLLQFFFFYFALP 77 Query: 83 HI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + I FVA +I L LN AY++EI+RS I SI KGQ++A+ A+G T T++ IIL Sbjct: 78 LMWKIELSPFVASMIVLGLNSGAYMTEIVRSGIQSIDKGQFEAAKALGFTYGDTMKKIIL 137 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQT PL +EFI+ILK TS+ASTIT+ E+ A+++ ++T+ P Y A YL Sbjct: 138 PQTFKVIIPPLGNEFITILKDTSLASTITLTEVLNNAKKVANSTFSPAEPYLTAAVFYLF 197 Query: 202 LTS-FCYIIQIKIESSVT 218 LT+ F Y+ + KIE ++ Sbjct: 198 LTTIFTYVFK-KIEKKLS 214 >gi|221197836|ref|ZP_03570882.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia multivorans CGD2M] gi|221204606|ref|ZP_03577623.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia multivorans CGD2] gi|221175463|gb|EEE07893.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia multivorans CGD2] gi|221181768|gb|EEE14169.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia multivorans CGD2M] Length = 230 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 81/214 (37%), Positives = 133/214 (62%), Gaps = 14/214 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----------ISL 56 +L++ S P L A V+T+ A +S V L+ +A++ I + + ++ Sbjct: 5 SLLVQSLPVLAQGA-VLTVKFAVLSMVFGLLGAVVLAMMGIRQGEPLEGFERIWVNALAW 63 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV + RGTPLLVQ+FVI+YGLP +GI D A +I+L+ N +AY+SE +R +I Sbjct: 64 LARAYVSLMRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAING 123 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQW A+Y++GL+ QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ + Sbjct: 124 IARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLR 183 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 +AQ +++ TYQPL +Y A +Y +L C I++ Sbjct: 184 SAQEMIAATYQPLPLYLAAAAIYWVL---CQILE 214 >gi|312621848|ref|YP_004023461.1| polar amino acid ABC transporter inner membrane subunit [Caldicellulosiruptor kronotskyensis 2002] gi|312202315|gb|ADQ45642.1| polar amino acid ABC transporter, inner membrane subunit [Caldicellulosiruptor kronotskyensis 2002] Length = 220 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 85/198 (42%), Positives = 129/198 (65%), Gaps = 4/198 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 II FP LL A+ VVT+ + I+ I L+ G A+ RI +++ I FYVW+FRGT Sbjct: 6 IIKYFPVLLKAS-VVTIELTAIAVTIGLVFGLVAALFRIS-KIKLLNYIGSFYVWLFRGT 63 Query: 69 PLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PLL+Q+F I+YGLP I + +F+A I+L +N AY +EIIR++I+SI +GQ++A+ Sbjct: 64 PLLLQIFFIYYGLPKIVPALTLPAFLAGAIALIINSGAYTAEIIRAAILSIDRGQYEAAK 123 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G+T QT+R++I+PQT P+ +EFI++LK +S+ STI + E+ + AQ S T Sbjct: 124 ALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRAAQLKASATG 183 Query: 187 QPLIIYCELAFVYLILTS 204 + IY +YL LT+ Sbjct: 184 RDAEIYLAALVIYLALTT 201 >gi|312876441|ref|ZP_07736425.1| polar amino acid ABC transporter, inner membrane subunit [Caldicellulosiruptor lactoaceticus 6A] gi|311796799|gb|EFR13144.1| polar amino acid ABC transporter, inner membrane subunit [Caldicellulosiruptor lactoaceticus 6A] Length = 220 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 85/200 (42%), Positives = 131/200 (65%), Gaps = 4/200 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++II FP LL A+ VVT+ + I+ I L+ G A+ RI +++ I FYVW+FR Sbjct: 4 SVIIKYFPVLLKAS-VVTIELTAIAVTIGLVFGLVAALFRIS-KIKVLNYIGSFYVWLFR 61 Query: 67 GTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 GTPLL+Q+F I+YGLP I + +F+A I+L +N AY +EIIR++I+SI +GQ++A Sbjct: 62 GTPLLLQIFFIYYGLPKIVPALTLPAFLAGAIALIINSGAYTAEIIRAAILSIDRGQYEA 121 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+T QT+R++I+PQT P+ +EFI++LK +S+ STI + E+ + AQ S Sbjct: 122 AKALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRAAQLKASQ 181 Query: 185 TYQPLIIYCELAFVYLILTS 204 T + IY +YL LT+ Sbjct: 182 TGRDAEIYIAALVIYLALTT 201 >gi|302872378|ref|YP_003841014.1| polar amino acid ABC transporter, inner membrane subunit [Caldicellulosiruptor obsidiansis OB47] gi|302575237|gb|ADL43028.1| polar amino acid ABC transporter, inner membrane subunit [Caldicellulosiruptor obsidiansis OB47] Length = 220 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 131/200 (65%), Gaps = 4/200 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++II FP LL A+ VVT+ + I+ I LI G A+ RI +++ I FYVW+FR Sbjct: 4 SIIIKYFPVLLKAS-VVTIELTAIAVTIGLIFGLVAALFRIS-KIKLLNYIGSFYVWLFR 61 Query: 67 GTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 GTPLL+Q+F I+YGLP I + +F+A I+L +N AY +EIIR++I+SI +GQ++A Sbjct: 62 GTPLLLQIFFIYYGLPKIVPALTLPAFLAGAIALIINSGAYTAEIIRAAILSIDRGQYEA 121 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+T QT+R++I+PQT P+ +EFI++LK +S+ STI + E+ + AQ S Sbjct: 122 AKALGMTYIQTMRYVIIPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRAAQLKASQ 181 Query: 185 TYQPLIIYCELAFVYLILTS 204 T + IY +YL LT+ Sbjct: 182 TGRDAEIYLAALVIYLALTT 201 >gi|118444293|ref|YP_878646.1| amino acid ABC transporter permease [Clostridium novyi NT] gi|118134749|gb|ABK61793.1| amino acid ABC transporter, permease component [Clostridium novyi NT] Length = 215 Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 83/203 (40%), Positives = 128/203 (63%), Gaps = 2/203 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +++ + P LL + V+T+ + IS ++ IG +A +++ ++ II I+ FY WIFR Sbjct: 4 DILSNMLPVLLKGS-VITIELTVISVILGSFIGVIVAGLKLS-NNKIIVYIISFYTWIFR 61 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTP+ +QLF +YGLP +GI VA II L+LN AY+SEIIR IISI KGQ++A Sbjct: 62 GTPMFLQLFFFYYGLPFLGISLTPMVAAIIGLSLNSGAYMSEIIRGGIISIDKGQFEACK 121 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G T QT+ +ILPQ + +EFI++LK TS+ S IT+ E+ + AQ +S+T Sbjct: 122 ALGFTNIQTMTKVILPQAFRVILPSVGNEFITMLKDTSLVSAITMEELMRNAQLQMSSTG 181 Query: 187 QPLIIYCELAFVYLILTSFCYII 209 +P+ + +YL++T+ II Sbjct: 182 RPVEPFLMAGLLYLLMTTVFNII 204 >gi|222529919|ref|YP_002573801.1| polar amino acid ABC transporter inner membrane subunit [Caldicellulosiruptor bescii DSM 6725] gi|222456766|gb|ACM61028.1| polar amino acid ABC transporter, inner membrane subunit [Caldicellulosiruptor bescii DSM 6725] Length = 220 Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 85/198 (42%), Positives = 129/198 (65%), Gaps = 4/198 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 II FP LL A+ VVT+ + I+ I L+ G A+ RI +++ I FYVW+FRGT Sbjct: 6 IIKYFPVLLKAS-VVTIELTAIAVTIGLVFGLVAALFRIS-KIKLLNYIGSFYVWLFRGT 63 Query: 69 PLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PLL+Q+F I+YGLP I + +F+A I+L +N AY +EIIR++I+SI +GQ++A+ Sbjct: 64 PLLLQIFFIYYGLPKIIPALTLPAFLAGAIALIINSGAYTAEIIRAAILSIDRGQYEAAK 123 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G+T QT+R++I+PQT P+ +EFI++LK +S+ STI + E+ + AQ S T Sbjct: 124 ALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRAAQLKASATG 183 Query: 187 QPLIIYCELAFVYLILTS 204 + IY +YL LT+ Sbjct: 184 RDAEIYIAALVIYLALTT 201 >gi|312135671|ref|YP_004003009.1| polar amino acid ABC transporter inner membrane subunit [Caldicellulosiruptor owensensis OL] gi|311775722|gb|ADQ05209.1| polar amino acid ABC transporter, inner membrane subunit [Caldicellulosiruptor owensensis OL] Length = 220 Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 85/200 (42%), Positives = 131/200 (65%), Gaps = 4/200 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++II FP LL A+ VVT+ + I+ I LI G A+ RI +++ + FYVW+FR Sbjct: 4 SVIIKYFPVLLKAS-VVTIELTAIAVTIGLIFGLVAALFRIS-KIKLLNYVGSFYVWLFR 61 Query: 67 GTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 GTPLL+Q+F I+YGLP I + +F+A I+L +N AY +EIIR++I+SI +GQ++A Sbjct: 62 GTPLLLQIFFIYYGLPKIVPALTLPAFLAGAIALIINSGAYTAEIIRAAILSIDRGQYEA 121 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+T QT+R++I+PQT P+ +EFI++LK +S+ STI + E+ + AQ S Sbjct: 122 AKALGMTYIQTMRYVIIPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRAAQLKASQ 181 Query: 185 TYQPLIIYCELAFVYLILTS 204 T + IY +YL LT+ Sbjct: 182 TGRDAEIYLAALVIYLALTT 201 >gi|311106036|ref|YP_003978889.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 6 [Achromobacter xylosoxidans A8] gi|310760725|gb|ADP16174.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 6 [Achromobacter xylosoxidans A8] Length = 222 Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 131/209 (62%), Gaps = 1/209 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ + F L+ A VVT+ + + +++ +IG + V R+ +I + Y+ +F Sbjct: 5 FSPVFADFGALINGA-VVTVEVTAGALLLACVIGLLVGVGRLNPKRYVIYNLCSVYLLLF 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+ F+GLPH GI +F ++ L + AY+SEI+R +I S+ +GQ +A+ Sbjct: 64 RGTPLLVQLFIWFFGLPHFGITLPAFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQTEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G++ Q +R I+LPQ + PL +EFI+++K++++ S +TI ++ Q+I+S + Sbjct: 124 RSLGMSSGQAMRIIVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVS 183 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Y+ L Y +A +YLILT+ ++ K+E Sbjct: 184 YRSLETYLVVALIYLILTTATMLVLRKVE 212 >gi|154249738|ref|YP_001410563.1| polar amino acid ABC transporter, inner membrane subunit [Fervidobacterium nodosum Rt17-B1] gi|154153674|gb|ABS60906.1| polar amino acid ABC transporter, inner membrane subunit [Fervidobacterium nodosum Rt17-B1] Length = 216 Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 84/203 (41%), Positives = 127/203 (62%), Gaps = 8/203 (3%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH---F 60 E N ++ +FP LL A TL + S I LI+G FI + R+ + I LI + Sbjct: 2 EELNDLLKNFPYLLLGAWE-TLKLTAFSVGIGLILGTFIGMGRL----SKIKLINYPCTA 56 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV RGTPLLVQ+ ++++GLP +GI + A I +L LN AYI+EI+R+ I SIPKG Sbjct: 57 YVEFLRGTPLLVQISIVYFGLPQLGIQLAPYPAAITALGLNSGAYIAEIVRAGIQSIPKG 116 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ ++GLT Q +R++ILPQ L +EFI++ K +S+AS I + E+ ++ Q Sbjct: 117 QYEAARSLGLTHWQAMRYVILPQAFRNILPALGNEFITLTKDSSLASVIGVSELMRSGQF 176 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 ++S T+Q IY +AF+Y I+T Sbjct: 177 VISRTFQTFSIYFGIAFIYFIMT 199 >gi|254245536|ref|ZP_04938857.1| Amino acid permease [Burkholderia cenocepacia PC184] gi|124870312|gb|EAY62028.1| Amino acid permease [Burkholderia cenocepacia PC184] Length = 230 Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 82/214 (38%), Positives = 133/214 (62%), Gaps = 14/214 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----------ISL 56 +L++ S P L A V+T+ A +S V L+ +A++ I S+ + ++ Sbjct: 5 SLLVQSLPVLAQGA-VLTVKFAVLSMVFGLLGAVVLAMMGIRQSEALDGFERIWVNALAW 63 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV + RGTPLLVQ+FVI+YGLP +GI D A +I+L+ N +AY+SE +R +I Sbjct: 64 LARAYVSLMRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAING 123 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQW A+Y++GL+ QT+R++I PQ + + LS+ IS++K TS+ S IT+ E+ + Sbjct: 124 IARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLR 183 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 +AQ +++ TYQPL + A VY +L C I++ Sbjct: 184 SAQEVIAATYQPLPLCLAAAAVYWVL---CQILE 214 >gi|150403485|ref|YP_001330779.1| polar amino acid ABC transporter inner membrane subunit [Methanococcus maripaludis C7] gi|150034515|gb|ABR66628.1| polar amino acid ABC transporter, inner membrane subunit [Methanococcus maripaludis C7] Length = 219 Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 129/199 (64%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+ VTL I +SF+++++I + IR ++LI+ Y+ +FRGTPLL+QLF I+Y Sbjct: 16 AVFVTLKITIMSFLLAVVIAVLVGSIRAMNFSKTLNLILMAYIEVFRGTPLLIQLFFIYY 75 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP IGIV S A ++ L+LN AYISEIIR++I S+P GQ++A+ ++G+++ +++ +I Sbjct: 76 GLPSIGIVMSSTFAAVLGLSLNGGAYISEIIRAAIQSVPVGQFEAAESLGMSKIESMIYI 135 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + PL + F +ILK +S+ S + I E+ + Q I + T +P IY + +Y Sbjct: 136 VLPQAFRITIPPLVNSFSAILKESSLISVLAITELTRIGQLIYTKTSRPFEIYLTIGLIY 195 Query: 200 LILTSFCYIIQIKIESSVT 218 L+L S II KIE + Sbjct: 196 LVLVSIISIISWKIEKKLN 214 >gi|300311471|ref|YP_003775563.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300074256|gb|ADJ63655.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 221 Score = 148 bits (373), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 83/224 (37%), Positives = 138/224 (61%), Gaps = 12/224 (5%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M E L+ + P L + TL A S + L++GF +AV RI I H+ Sbjct: 1 MLMEILELLQQAAPTL-AKGVGYTLLFALASMLGGLVLGFVLAVARIVPWRPI-----HW 54 Query: 61 ----YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 YV + RGTPLLVQ+FV++YGLP +GI F A +++L+LN SAY+SE +R +I+ Sbjct: 55 PAAIYVSMMRGTPLLVQIFVVYYGLPGMGIEFSPLTAGVLTLSLNASAYLSESLRGAILG 114 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + +GQW+A++++GLT QT+R+II+PQ + + +S+ IS++K TS+ S IT+ E+ Sbjct: 115 VTRGQWNAAFSVGLTYFQTLRYIIVPQAVRIAVPSMSNTLISLIKDTSLVSVITVTELML 174 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCY-IIQIKIESSVTQ 219 + +++ T++PL +Y A +Y +L S C+ +Q ++E + + Sbjct: 175 ATKEVIAVTFRPLPLYVAAAAIYWML-SLCFEALQHRLEKKLGK 217 >gi|254671932|emb|CBA04286.1| polar amino acid transport system permease protein [Neisseria meningitidis alpha275] Length = 190 Score = 147 bits (372), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 71/160 (44%), Positives = 104/160 (65%), Gaps = 4/160 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM----HFYV 62 ++I+ +F ++ A V+LP+A SFVI ++I +A++RI + I I+ FY+ Sbjct: 7 DMIVSAFLPMVKAGFAVSLPLAAASFVIGMMIAVAVALVRIMPAGGIARKILLKLVEFYI 66 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTPLLVQL ++FYGLP +GI D A II +LN AY SE IR++I+S+PKGQW Sbjct: 67 SVIRGTPLLVQLVIVFYGLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQW 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +A ++IG+T QT R I+ PQ + PLS+EFI + K Sbjct: 127 EAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKK 166 >gi|226940536|ref|YP_002795610.1| amino acid ABC transporter, permease protein [Laribacter hongkongensis HLHK9] gi|226715463|gb|ACO74601.1| probable amino acid ABC transporter, permease protein [Laribacter hongkongensis HLHK9] Length = 219 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 83/218 (38%), Positives = 132/218 (60%), Gaps = 3/218 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L + P +L A TL A S + L++GF IA++R+ +++ + YV Sbjct: 2 NWTELWALALPVMLQGAWH-TLLFAISSMALGLLLGFAIALVRLT-RLPVLAPLAALYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RGTPLLVQ+FVI+YGLP IGI FD A I++LT+N +AY+SE +R +I + GQW Sbjct: 60 AMRGTPLLVQIFVIYYGLPGIGIEFDPVTAGILALTMNAAAYLSESMRGAIAGVSTGQWQ 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++G + Q++R II PQ + + LS+ IS++K TS+ S IT+ E+ + I++ Sbjct: 120 AASSLGFSWWQSMRFIIAPQALRLAVPSLSNTLISLIKDTSLVSVITVSELMLATKEIIA 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV-TQH 220 TYQPL +Y A +Y +++ +Q ++E+ + T H Sbjct: 180 QTYQPLPLYLAAAGIYWLMSLAFEQVQKRVENRLETAH 217 >gi|302391067|ref|YP_003826887.1| amino acid ABC transporter membrane protein [Acetohalobium arabaticum DSM 5501] gi|302203144|gb|ADL11822.1| amino acid ABC transporter membrane protein, PAAT family [Acetohalobium arabaticum DSM 5501] Length = 217 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 76/200 (38%), Positives = 126/200 (63%), Gaps = 5/200 (2%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 YE F +++ P LL + V+T+ I I+ + +I+G + + R+ + II + Y+ Sbjct: 2 YEAF---VEALPFLLKGS-VMTIKITTIAVGMGIILGNVLGLARVS-KNPIIGGVAKGYI 56 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 IFRGTPLLVQLF+++YGLP +GI ++A ++ L LN AY+ EI+R I SI KGQ Sbjct: 57 EIFRGTPLLVQLFILYYGLPSLGINLTPYIAAVLGLGLNSGAYVGEIVRGGIESIDKGQM 116 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ ++G++ Q++R+IILPQ + L +EFI++LK +S+ S I + ++ + + I+ Sbjct: 117 EAARSVGMSYAQSMRYIILPQAFKSIVPALGNEFIALLKDSSLVSVIAVKDLTRQGRLII 176 Query: 183 STTYQPLIIYCELAFVYLIL 202 S TYQ I+ +A Y I+ Sbjct: 177 SRTYQSFFIFLTVAVFYFIM 196 >gi|89897620|ref|YP_521107.1| hypothetical protein DSY4874 [Desulfitobacterium hafniense Y51] gi|89337068|dbj|BAE86663.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 224 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 81/208 (38%), Positives = 130/208 (62%), Gaps = 9/208 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+ W L+++S LL ++ TL + + I ++IG F+A++R+ S + L + Sbjct: 1 MELRW-ELMLESVNPLLKGTLI-TLELTAGAVGIGIVIGLFMALMRLSNSRILRGLSIA- 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSII 115 Y+ FRGTPLLVQL ++++ LP + + F F+A I ++ LN AYI+EI R+ I Sbjct: 58 YIDFFRGTPLLVQLLMVYFALPQL-LNFQVPDNYQFIAAITAMGLNSGAYIAEIFRAGIQ 116 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SI KGQ +A+ ++G+T+ Q +RH+ILPQ PL +EFI++LK +S+ S I + ++ Sbjct: 117 SIDKGQGEAARSLGMTQGQAMRHVILPQAFKRVIPPLGNEFIALLKDSSLVSFIALQDLM 176 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + IVS TYQP +IY E+A YL +T Sbjct: 177 YSGKLIVSRTYQPFVIYLEVALFYLAMT 204 >gi|317506835|ref|ZP_07964608.1| extracellular solute-binding protein, family 3 [Segniliparus rugosus ATCC BAA-974] gi|316254871|gb|EFV14168.1| extracellular solute-binding protein, family 3 [Segniliparus rugosus ATCC BAA-974] Length = 473 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 76/222 (34%), Positives = 134/222 (60%), Gaps = 6/222 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W + + +P + A VTLP+A I FV+ L+I A+ RI + +S + YV Sbjct: 250 QWETVAANLWP-MAKALARVTLPLAAICFVLGLVIAVLTALARIS-RNRAVSALARSYVS 307 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQLF+I++ LP G+ F + +++L+L+ AY SE++R++I+++P GQ + Sbjct: 308 VIRGTPLLVQLFLIYFALPEFGVKLPPFPSAVVALSLSVGAYASEVVRAAILAVPSGQSE 367 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+G +R QT+R ++ PQ + PLS+ I+++K TS+A+TI + E+F+TAQ + Sbjct: 368 AARALGFSRGQTLRLVVFPQAAKIAVPPLSNTLIALVKDTSLAATIQVTELFRTAQIAAA 427 Query: 184 TTYQPLIIYCELAFVY----LILTSFCYIIQIKIESSVTQHT 221 ++ +Y A Y L+L+ F ++ ++E + Sbjct: 428 PIFRYFALYATAAVFYWVVCLVLSWFQGRLERRLERGAANTS 469 >gi|323702153|ref|ZP_08113820.1| polar amino acid ABC transporter, inner membrane subunit [Desulfotomaculum nigrificans DSM 574] gi|323532840|gb|EGB22712.1| polar amino acid ABC transporter, inner membrane subunit [Desulfotomaculum nigrificans DSM 574] Length = 221 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 128/201 (63%), Gaps = 3/201 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 + +I D+ P LL + +T+ + ++ IIG FIA+ RI + SL + Y Sbjct: 2 DTLQVIFDALPALL-VGLKLTIELTALAVFFGCIIGLFIALARISGIGILKSLAVA-YTE 59 Query: 64 IFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FRGTPLLVQLF++F+GLP IG ++F +++ +LN AY++EI R+ I SI +GQ Sbjct: 60 FFRGTPLLVQLFMVFFGLPQLIGHPVNAFSVAVVACSLNSGAYVAEIFRAGIQSIERGQM 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ ++G+T Q +R+IILPQ PL +EFI+++K TS+ S I + E+ +T Q I+ Sbjct: 120 EAARSLGMTYAQAMRYIILPQAFKRVIPPLGNEFIAMMKDTSLVSVIGLAELARTGQLII 179 Query: 183 STTYQPLIIYCELAFVYLILT 203 +TTY+ + I+ +A +YLI+T Sbjct: 180 ATTYRAIEIWLAVALIYLIMT 200 >gi|241895358|ref|ZP_04782654.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] gi|241871332|gb|EER75083.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] Length = 233 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 92/221 (41%), Positives = 137/221 (61%), Gaps = 12/221 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISL 56 F I PQL+ A I T+P+A ISFVI+++I +AV+R + F ++ Sbjct: 2 FEFIATYAPQLIIAGIKYTIPLALISFVIAVVIAAIVAVLRSYVPHATDLGKFGWQVLKF 61 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSS 113 I+ FYVWIFR TP+LVQLFV+FYGLP +GI + ++A I L+LN AY SE IR++ Sbjct: 62 ILWFYVWIFRSTPMLVQLFVVFYGLPKLGISWLSPSGWIAAIWVLSLNTGAYASEAIRAA 121 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SIP Q +A+ A+G+T +Q IILPQ S L++ FIS++K TS+AS +TI E Sbjct: 122 ISSIPDTQREAAAALGMTDRQIFMRIILPQATRISIPTLANSFISLVKDTSLASVVTIVE 181 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 +F +Q++ + ++PL +Y +A +Y + + I Q I+ Sbjct: 182 MFYLSQQLAAVNFEPLKMYLLVAAIYALFVTILSIPQRYIQ 222 >gi|319790880|ref|YP_004152520.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315593343|gb|ADU34409.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 222 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 74/214 (34%), Positives = 128/214 (59%), Gaps = 1/214 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ + +P LL A+V T+ I + + ++G + + R+ I + YV + Sbjct: 5 FSPVWQGWPDLLRGALV-TVEITACALALGCVLGLIVGIGRLNPKRRWIYSVCTAYVAVI 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF++F+GLPH GI+ +F+ ++ L + AY+SEI+R +I SI KGQ A+ Sbjct: 64 RGTPLLVQLFILFFGLPHFGILLPAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQTMAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+T +R I+LPQ + PL +EFI+++K++++ S +TI ++ Q+I+S + Sbjct: 124 QSLGMTPGVAMREIVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISVS 183 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 Y+ L +Y +A VY +LT ++ E + Q Sbjct: 184 YRSLEVYLAIALVYFVLTGTMTLVLRHFEQKLRQ 217 >gi|168186416|ref|ZP_02621051.1| amino acid ABC transporter, permease component [Clostridium botulinum C str. Eklund] gi|169295523|gb|EDS77656.1| amino acid ABC transporter, permease component [Clostridium botulinum C str. Eklund] Length = 215 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 80/203 (39%), Positives = 128/203 (63%), Gaps = 2/203 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +++ + P LL + V+T+ + IS ++ IIG +A +++ ++ I+ I+ FY WIFR Sbjct: 4 DILSNMLPILLKGS-VITIELTVISVILGSIIGVIVAGLKLS-NNKIVVYIVSFYTWIFR 61 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTP+ +QLF +YGLP +GI VA II L+LN AY+SEIIR I+SI KGQ++A Sbjct: 62 GTPMFLQLFFFYYGLPFLGISLTPMVAAIIGLSLNSGAYMSEIIRGGIVSIDKGQFEACK 121 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G T QT+ +ILPQ + +EFI++LK TS+ S IT+ E+ + AQ +S+T Sbjct: 122 SLGFTNIQTMTKVILPQAFRVILPSVGNEFITMLKDTSLVSAITMEELMRNAQLQMSSTG 181 Query: 187 QPLIIYCELAFVYLILTSFCYII 209 P+ + +YL++T+ +I Sbjct: 182 SPVEPFLIAGLLYLLMTTVFNVI 204 >gi|42820805|emb|CAE02641.1| YckJ protein [Bacillus amyloliquefaciens FZB42] Length = 168 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 78/161 (48%), Positives = 106/161 (65%), Gaps = 1/161 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV RGTPLLVQLF+IFY P I D F + +I+ +LN AY SEIIR+SI S+PKG Sbjct: 5 YVSAVRGTPLLVQLFIIFYLFPTFNITLDPFPSAVIAFSLNVGAYASEIIRASISSVPKG 64 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A Y IG+T ++T+ +ILPQ S PLS+ FIS++K TS+AS I + E+F+ AQ Sbjct: 65 QWEAGYTIGMTYRKTLFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQE 124 Query: 181 IVSTTY-QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I + Q L+IY E AF+Y I+ I+Q IE + ++ Sbjct: 125 IGAQNLDQILVIYIEAAFIYWIICFLLSIVQHVIERRLDRY 165 >gi|323701355|ref|ZP_08113029.1| polar amino acid ABC transporter, inner membrane subunit [Desulfotomaculum nigrificans DSM 574] gi|323533614|gb|EGB23479.1| polar amino acid ABC transporter, inner membrane subunit [Desulfotomaculum nigrificans DSM 574] Length = 223 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 130/210 (61%), Gaps = 2/210 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I+ P LL A V+T+ + + V +IG +A+ +I S I++ I Y W+ RG Sbjct: 11 ILKILPTLLKGA-VMTIKLTAFAIVFGTLIGLIVALAKIS-SIKILNWIGGLYTWVIRGV 68 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QL ++YGL GI+ D F ++ L++ AYI+EIIR+ I+SI +GQ +A+ ++ Sbjct: 69 PLLLQLMFLYYGLAFAGIMLDEFTVAVLGLSVCGGAYIAEIIRAGILSIDRGQMEAALSM 128 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+T Q +R +ILPQ P+ +EFI+++K +++ S IT+ E+ ++A ++ S T++P Sbjct: 129 GMTYAQAMRRVILPQAYRRLLPPMGNEFITLMKDSALVSVITMTELLRSATQLQSVTFRP 188 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVT 218 + +Y +YLI+T+F I+ ++E + Sbjct: 189 VEVYITAGLLYLIMTTFFTIVFDRLERKLA 218 >gi|317406132|gb|EFV86389.1| polar amino acid transport system permease [Achromobacter xylosoxidans C54] Length = 222 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 129/212 (60%), Gaps = 1/212 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + F L+ A VVT+ + + ++ +IG + V R+ +II + Y+ F Sbjct: 5 FAPVFADFDALVRGA-VVTIEVTAGALLLGCVIGLLVGVGRLNPQRSIIYNLCSVYLLFF 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+ F+GLP G+ +F ++ L + AY+SEI+R +I S+ +GQ +A+ Sbjct: 64 RGTPLLVQLFIWFFGLPQFGVTLPAFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQTEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G++ Q +R IILPQ + PL +EFI+++K++++ S +TI ++ Q+I+S + Sbjct: 124 RSLGMSSGQAMRIIILPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVS 183 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 Y+ L Y +A +YL+LT+ +I +IE + Sbjct: 184 YRSLETYLVVALIYLVLTTAAMLILRRIEQRL 215 >gi|260881503|ref|ZP_05404565.2| glutamine ABC transporter, permease protein [Mitsuokella multacida DSM 20544] gi|260848606|gb|EEX68613.1| glutamine ABC transporter, permease protein [Mitsuokella multacida DSM 20544] Length = 221 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 82/199 (41%), Positives = 126/199 (63%), Gaps = 3/199 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+L+++SFP LL A VT+ I +S + ++IG F+ + RI ++ ++ YV F Sbjct: 5 FDLVVNSFPLLLVGA-GVTIKITALSVALGVVIGLFVGIARIS-RIKLLRVLAAIYVDFF 62 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQ+F++++ LP I G D FVA I S +N AY++EI R+ I SI KGQ +A Sbjct: 63 RGTPLLVQIFLVYFALPVITGQRVDPFVAAIGSCGINSGAYVAEIFRAGIQSIDKGQMEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++G+T QT+R+II+PQ PL +EFI++LK +S+ S I E+ + Q I++ Sbjct: 123 GRSLGMTWVQTMRYIIVPQAFKRVIPPLGNEFIALLKDSSLVSVIGFEELTRRGQLIIAK 182 Query: 185 TYQPLIIYCELAFVYLILT 203 TY L I+ +A +YL +T Sbjct: 183 TYGSLEIWLSVAVIYLAMT 201 >gi|157691133|ref|YP_001485595.1| L-cystine ABC transporter membrane protein [Bacillus pumilus SAFR-032] gi|157679891|gb|ABV61035.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Bacillus pumilus SAFR-032] Length = 230 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 89/219 (40%), Positives = 136/219 (62%), Gaps = 8/219 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++L+ SF ++ I T+P+A I+F+I + I A+ R+ + I YV Sbjct: 13 WDLLQQSFWPMVMQGIYYTIPLAIIAFIIGIFIALVTALARMS-KIKALRWIFSIYVSAV 71 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL VQLF+IFY P I D + + II+ +LN AY SEIIR+S++S+PKGQW+A Sbjct: 72 RGTPLFVQLFIIFYFFPTFNITLDPYPSAIIAFSLNVGAYASEIIRASVLSVPKGQWEAG 131 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y+IG+T ++T+ +ILPQ + S PLS+ FIS++K TS+AS I + E+F+ +Q I + Sbjct: 132 YSIGMTHRKTLVRVILPQAVRVSIPPLSNSFISLVKDTSLASQILVAEMFRKSQEIAAAN 191 Query: 186 Y-QPLIIYCELAFVYLILTSFCYI---IQIKIESSVTQH 220 Q L IY E A +Y + FC+I +Q +IE + ++ Sbjct: 192 LDQILFIYMEAALIYWV---FCFILSLVQHQIEKRLDRY 227 >gi|197117374|ref|YP_002137801.1| ABC transporter membrane protein [Geobacter bemidjiensis Bem] gi|197086734|gb|ACH38005.1| ABC transporter, membrane protein [Geobacter bemidjiensis Bem] Length = 339 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 84/211 (39%), Positives = 135/211 (63%), Gaps = 9/211 (4%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 PQLL A++ + CI VIS + G IA+ RI + +S + ++W+FRGTPLL+Q Sbjct: 133 PQLLKGAVMTITLVVCI-IVISPLGGLLIALGRIS-TFKPVSGLCWLFIWLFRGTPLLLQ 190 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LF I+YGLP +GI F F A I+ L LN+SAY+ EIIR I SI GQ +A+ AIG++ Sbjct: 191 LFFIYYGLPSLGITFKPFTAAILGLGLNYSAYLGEIIRGGIQSIEHGQMEAAKAIGMSYW 250 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLII 191 Q +R +++PQT P+ +EFI+++K T++ STI + E+ ++A ++ + + LI+ Sbjct: 251 QAMRRVVIPQTYKRLMPPIGNEFIALIKDTALVSTIAMVELMRSADQMFNAYFNVTALIL 310 Query: 192 YCELAFVYLILTS-FCYIIQ-IKIESSVTQH 220 AF+YL+ T+ F +I + I+I + + ++ Sbjct: 311 ---AAFIYLLFTTIFTFIFEKIEIRAGIYEN 338 >gi|16330176|ref|NP_440904.1| glutamine ABC transporter [Synechocystis sp. PCC 6803] gi|1652664|dbj|BAA17584.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Synechocystis sp. PCC 6803] Length = 530 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 85/205 (41%), Positives = 125/205 (60%), Gaps = 10/205 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIF 65 N +I F L +I+ L + S LI G +A+ I SD + LI YV F Sbjct: 301 NFLITLFRNLFKGSILTVL-LTAFSVFFGLIGGTGVAIALI--SDIKPLQLIFRIYVEFF 357 Query: 66 RGTPLLVQLFVIFYGLP------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 RGTP+LVQLF+I++GLP +GI D F A II+L+LN +AY++EIIR I SI + Sbjct: 358 RGTPMLVQLFIIYFGLPALFKEIGLGITIDRFPAAIIALSLNVAAYLAEIIRGGIQSIDQ 417 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A ++G++ QT++ +I PQ PL +EFI+++K TS+ + I E+F+ Q Sbjct: 418 GQWEACESLGMSPWQTMKEVIFPQAFRRILPPLGNEFITLIKDTSLTAVIGFQELFREGQ 477 Query: 180 RIVSTTYQPLIIYCELAFVYLILTS 204 IV+TTY+ +Y +A VYL+LT+ Sbjct: 478 LIVATTYRAFEVYIAVALVYLLLTT 502 >gi|288575077|ref|ZP_06393434.1| polar amino acid ABC transporter, inner membrane subunit [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570818|gb|EFC92375.1| polar amino acid ABC transporter, inner membrane subunit [Dethiosulfovibrio peptidovorans DSM 11002] Length = 520 Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 66/175 (37%), Positives = 122/175 (69%), Gaps = 2/175 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P+L AAI T+ ++ + V+++++G +A++R+F ++++ +YV I RGTP+L+ Sbjct: 296 MPKLGRAAIT-TIEVSLAAMVLAVVLGLCLAIVRVF-GPAPLAVLSTWYVEIIRGTPVLI 353 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF IFYGLP++GI D F A +I L LN++AY +EI R+ ++++P GQ +A+ +G+TR Sbjct: 354 QLFFIFYGLPNVGIKLDPFTAGVIGLGLNYAAYEAEIYRAGLMAVPAGQMEAALGLGMTR 413 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 ++ +RH+++PQ + P++++FIS+LK +S+ S IT+ ++ + +I +T Y Sbjct: 414 REALRHVVVPQAVRMVLPPVTNDFISLLKDSSLVSVITLVDLTKAYGQIATTYYD 468 >gi|253701871|ref|YP_003023060.1| polar amino acid ABC transporter inner membrane protein [Geobacter sp. M21] gi|251776721|gb|ACT19302.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter sp. M21] Length = 339 Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 84/211 (39%), Positives = 135/211 (63%), Gaps = 9/211 (4%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 PQLL A++ + CI VIS + G IA+ RI + +S + ++W+FRGTPLL+Q Sbjct: 133 PQLLKGAMMTITLVVCI-IVISPLGGLLIALGRIS-TFKPVSGLCWLFIWLFRGTPLLLQ 190 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LF I+YGLP +G+ F F A I+ L LN+SAY+ EIIR I SI GQ +A+ AIG++ Sbjct: 191 LFFIYYGLPSLGVTFKPFTAAILGLGLNYSAYLGEIIRGGIQSIEHGQMEAAKAIGMSYW 250 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLII 191 Q +R +I+PQT P+ +EFI+++K T++ STI + E+ ++A ++ + + LI+ Sbjct: 251 QAMRRVIIPQTYKRLMPPIGNEFIALIKDTALVSTIAMVELMRSADQMFNAYFNVTALIL 310 Query: 192 YCELAFVYLILTS-FCYIIQ-IKIESSVTQH 220 AF+YL+ T+ F +I + I+I + + ++ Sbjct: 311 ---AAFIYLLFTTIFTFIFEKIEIRAGIYEN 338 >gi|194015816|ref|ZP_03054431.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Bacillus pumilus ATCC 7061] gi|194012171|gb|EDW21738.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Bacillus pumilus ATCC 7061] Length = 230 Score = 145 bits (365), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 75/164 (45%), Positives = 109/164 (66%), Gaps = 7/164 (4%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV RGTPL VQLF+IFY P I D + + II+ +LN AY SEIIR+S++S+PKG Sbjct: 67 YVSAVRGTPLFVQLFIIFYFFPTFNITLDPYPSAIIAFSLNVGAYASEIIRASVLSVPKG 126 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A Y+IG+T ++T+ +ILPQ + S PLS+ FIS++K TS+AS I + E+F+ +Q Sbjct: 127 QWEAGYSIGMTHRKTLVRVILPQAVRVSIPPLSNSFISLVKDTSLASQILVAELFRKSQE 186 Query: 181 IVSTTY-QPLIIYCELAFVYLILTSFCYI---IQIKIESSVTQH 220 I + Q L IY E A +Y + FC+I +Q +IE + ++ Sbjct: 187 IAAANLDQILFIYMEAALIYWV---FCFILSLVQHQIEKRLDRY 227 >gi|293605113|ref|ZP_06687505.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292816516|gb|EFF75605.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 222 Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 132/220 (60%), Gaps = 6/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M E+ + D F L+ A VVT+ + + ++ ++G + V R+ +I + Sbjct: 1 MNLEFAPVFAD-FDSLMRGA-VVTIEVTAGALLLGCVMGLLVGVGRLNPKRYVIYNLCSV 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ FRGTPLLVQLF+ F+GLP G+ +F ++ L + AY+SEI+R +I S+ +G Sbjct: 59 YLLFFRGTPLLVQLFIWFFGLPQFGVTLPAFACGVLGLGMYSGAYVSEIVRGAIQSVDRG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++G++ Q +R IILPQ + PL +EFI+++K++++ S +TI ++ Q+ Sbjct: 119 QTEAARSLGMSSGQAMRIIILPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQK 178 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I+S +Y+ L Y +A +YL+LT+ +I K+E QH Sbjct: 179 IISVSYRSLETYLVVALIYLVLTTAAMLILRKVE----QH 214 >gi|326384738|ref|ZP_08206415.1| amino acid ABC transporter membrane protein [Gordonia neofelifaecis NRRL B-59395] gi|326196546|gb|EGD53743.1| amino acid ABC transporter membrane protein [Gordonia neofelifaecis NRRL B-59395] Length = 485 Score = 144 bits (363), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 78/204 (38%), Positives = 123/204 (60%), Gaps = 1/204 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 + A I T+P+A +SF I L+I +A+ R+ + +++ I Y+ I RGTPLLVQLF Sbjct: 279 MAKATITTTIPLAAVSFAIGLVIALLVALARMA-DNRVLAWIARAYISIIRGTPLLVQLF 337 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +IFY LP +G A I+ +LN Y +EIIRS+I+S+PKGQ +A+ IG++ T Sbjct: 338 IIFYALPELGFKVPPLPAAAIAFSLNVGGYAAEIIRSAIMSVPKGQSEAAQTIGMSYATT 397 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R IILPQ + LS+ IS++K TS+ASTI + E+ + AQ + T++ +Y Sbjct: 398 MRRIILPQAARIAVPGLSNTLISLVKDTSLASTILVTELLRVAQIAAAPTFEFFALYMTA 457 Query: 196 AFVYLILTSFCYIIQIKIESSVTQ 219 A Y I+ ++Q +E+ + + Sbjct: 458 AVYYWIVCLALSLLQGALETRLGR 481 >gi|239813181|ref|YP_002942091.1| polar amino acid ABC transporter inner membrane protein [Variovorax paradoxus S110] gi|239799758|gb|ACS16825.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 222 Score = 144 bits (363), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 73/214 (34%), Positives = 126/214 (58%), Gaps = 1/214 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ + +P LL A+V T+ I + + ++G + + R+ + YV Sbjct: 5 FSPVWQGWPDLLRGALV-TVEITACALALGCVLGLLVGIGRLNPKRRWLYGACTAYVAAI 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF++F+GLPH GI+ +F+ ++ L + AY+SEI+R +I SI KGQ A+ Sbjct: 64 RGTPLLVQLFILFFGLPHFGILLPAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQTMAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+T +R I+LPQ + PL +EFI+++K++++ S +TI ++ Q+I+S + Sbjct: 124 QSLGMTPGTAMREIVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISVS 183 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 Y+ L +Y +A VY +LT ++ E + Q Sbjct: 184 YRSLEVYLAIALVYFVLTGTMTLVLRHFEQKLRQ 217 >gi|150020367|ref|YP_001305721.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Thermosipho melanesiensis BI429] gi|149792888|gb|ABR30336.1| Ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Thermosipho melanesiensis BI429] Length = 216 Score = 144 bits (363), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 78/200 (39%), Positives = 128/200 (64%), Gaps = 2/200 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E ++I++ P LL A TL + S +I L++G FI + R+ I++ YV Sbjct: 2 EAITVVIENLPFLLLGAWD-TLKLTFFSVLIGLVLGTFIGMGRLS-KIKAINIPSTVYVE 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RGTPLLVQ+ ++++GLP +GI +++ A I++L LN AYI+EI+R+ I SIPKGQ++ Sbjct: 60 FLRGTPLLVQISIVYFGLPQLGIQLEAYPAAIVALGLNSGAYIAEIVRAGIQSIPKGQYE 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++G+T QT+R+IILPQ L +EFI++ K +S+AS I + E+ + Q +++ Sbjct: 120 AARSLGMTHFQTMRYIILPQAFKNILPALGNEFITLTKDSSLASIIGVTELMRRGQFVIT 179 Query: 184 TTYQPLIIYCELAFVYLILT 203 T+Q IY +A +Y ++T Sbjct: 180 RTFQTFSIYFGIALIYFVMT 199 >gi|159904733|ref|YP_001548395.1| polar amino acid ABC transporter inner membrane subunit [Methanococcus maripaludis C6] gi|159886226|gb|ABX01163.1| polar amino acid ABC transporter, inner membrane subunit [Methanococcus maripaludis C6] Length = 219 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 76/199 (38%), Positives = 127/199 (63%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+ VTL I +SF++++II + +R ++L++ YV +FRGTPLL+QLF I+Y Sbjct: 16 AVFVTLKITIMSFLLAVIIAVLVGSVRAMNFSKTLNLVLMVYVEVFRGTPLLIQLFFIYY 75 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP +GIV S A ++ L+LN AYISEI+R++I S+P GQ++A+ ++G+++ +++ +I Sbjct: 76 GLPSVGIVMSSTFAAVLGLSLNGGAYISEIMRAAIQSVPVGQFEAAESLGMSKIESMIYI 135 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + L + F ++LK +S+ S + I E+ + Q I + T +P IY + +Y Sbjct: 136 VLPQAFRITVPSLVNSFSALLKESSLISVLAITELTRIGQLIYTKTSRPFEIYLTIGLIY 195 Query: 200 LILTSFCYIIQIKIESSVT 218 L+L S I KIE + Sbjct: 196 LVLVSIISISSWKIEKKLN 214 >gi|328958175|ref|YP_004375561.1| putative ABC transporter [Carnobacterium sp. 17-4] gi|328674499|gb|AEB30545.1| putative ABC transporter [Carnobacterium sp. 17-4] Length = 226 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 81/211 (38%), Positives = 131/211 (62%), Gaps = 2/211 (0%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L IDSF +L + TL I+ +S + I+GF +A++R+ S I+S+I Y+ RG Sbjct: 14 LAIDSFGYIL-KGLGYTLGISMVSMIFGTILGFLLAIMRMSTSK-IVSMIARTYISFMRG 71 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TP LV LF++++G P IGI F + A II +L+ +AY +EIIRSS+ S+ GQW+A+YA Sbjct: 72 TPTLVFLFILYFGFPFIGIQFKAVNAAIIGFSLSSAAYSAEIIRSSLHSVDHGQWEAAYA 131 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL +R +I+PQ + + P+S+ F+ ++K TS+A+ IT+PEIFQ A+ + + Sbjct: 132 LGLKWSFIMRKVIIPQAMRIAIPPMSNVFLDLIKGTSLAAMITVPEIFQQAKIVGGREFD 191 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 + +Y +A +Y + S I Q +E + Sbjct: 192 YMTMYILVALIYWAICSVFTIFQNYLEKRTS 222 >gi|325284208|ref|YP_004256749.1| polar amino acid ABC transporter, inner membrane subunit [Deinococcus proteolyticus MRP] gi|324316017|gb|ADY27132.1| polar amino acid ABC transporter, inner membrane subunit [Deinococcus proteolyticus MRP] Length = 219 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 132/211 (62%), Gaps = 3/211 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F LI DS P LL A V+TL + I+ V I+G +A+ R+ ++ + Y+ + Sbjct: 3 FQLIADSLPFLLQGA-VLTLQVTAIALVAGTILGTLLALARLS-PIKPLAWLATAYIELI 60 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQ+F+I++GLP I G + F A +++ +LN +AY++EI+RS I +P+GQ +A Sbjct: 61 RGTPLLVQIFLIYFGLPQITGTNLEPFPAGVLAFSLNSAAYVAEIMRSGIQGVPRGQTEA 120 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 S ++G + + T+R+I+LPQ PL +E +++LK+TS+ S+I + E+ + Q + + Sbjct: 121 SLSLGFSPRDTMRYIVLPQAFRRVLPPLVNEALNLLKNTSLLSSIALVELTRAGQIVAAR 180 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +Y+P +Y +A VYL +T + ++E Sbjct: 181 SYKPFEMYLAIALVYLAMTMVLSFLSSRLEK 211 >gi|294101423|ref|YP_003553281.1| polar amino acid ABC transporter, inner membrane subunit [Aminobacterium colombiense DSM 12261] gi|293616403|gb|ADE56557.1| polar amino acid ABC transporter, inner membrane subunit [Aminobacterium colombiense DSM 12261] Length = 217 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 75/199 (37%), Positives = 118/199 (59%), Gaps = 1/199 (0%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 V T+ + ++ + I+G I +R+ I L Y+++ RGTPLL+QLF+I++GL Sbjct: 20 VFTVKASILAVTLGSIMGILIGALRVVPVKPIKGLAAA-YIYVIRGTPLLIQLFLIYFGL 78 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 P +GI +F A II L++N + Y+ EI+R I ++PKGQW+A+ +GL+ T+RHIIL Sbjct: 79 PSLGINLPAFTAGIIGLSINSAGYVGEIVRGGIEAVPKGQWEAAKVLGLSYLGTMRHIIL 138 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ I L +EF++++K +S+ ST+ I E+ Q++ S TY + + +YL Sbjct: 139 PQAIRNMLPALGNEFVTLIKESSLLSTLAIAELTMVGQQVRSVTYASFETFIMVGLIYLC 198 Query: 202 LTSFCYIIQIKIESSVTQH 220 LTSF I IE H Sbjct: 199 LTSFTSIALQLIEKRWQVH 217 >gi|325519635|gb|EGC98978.1| hypothetical protein B1M_38906 [Burkholderia sp. TJI49] Length = 220 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 75/211 (35%), Positives = 125/211 (59%), Gaps = 2/211 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L++ P +L+ A VT+ + ++ V L+IG A+ R+ ++ M Y+W+ R Sbjct: 5 HLVLKYLP-MLFEAAGVTVQLTLLATVAGLVIGLAAALGRLS-RHRVLRDAMGAYIWLIR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 TPLLVQLF+I++GLP GI F + +I L LN AY +E IR+ I++IP GQ +AS Sbjct: 63 STPLLVQLFIIYFGLPQFGIELSPFTSGVIGLALNVGAYNAETIRAGILAIPHGQIEASR 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G +T+R ++LPQ + PL + I + K TS+ STIT+ E+F Q++V T+ Sbjct: 123 SLGFGAARTMRLVVLPQALKLIVPPLGNNLIILTKDTSLVSTITLAELFMRTQQLVGATF 182 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +P +Y A +Y +LT+ ++ + E + Sbjct: 183 KPFELYFACAMIYALLTTGTSVLLRQFEQRL 213 >gi|307155069|ref|YP_003890453.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece sp. PCC 7822] gi|306985297|gb|ADN17178.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7822] Length = 511 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 83/214 (38%), Positives = 131/214 (61%), Gaps = 9/214 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K++ + I+ F L+ A + L + S + L+ G IA + + +++ L+ Y Sbjct: 278 KFDPQSFYINLFQNLIKGAGITVL-LTAFSVLFGLMGGTLIA-LALISPYSLLRLLCRIY 335 Query: 62 VWIFRGTPLLVQLFVIFYGLP-----HIGIVFD--SFVAIIISLTLNFSAYISEIIRSSI 114 V FRGTP+LVQLF+I++GLP H+GI + F A +I+L+LN +AY++EIIR I Sbjct: 336 VDFFRGTPMLVQLFIIYFGLPALFQDHLGIEWSLPRFPAAVIALSLNVAAYLAEIIRGGI 395 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 SI +GQW+A ++G+T +QT++ +I PQ PL +EFI+++K TS+ + I E+ Sbjct: 396 ESIDRGQWEACESLGMTPQQTMQDVIFPQAFRRILPPLGNEFITLIKDTSLTAVIGFQEL 455 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 F+ Q IV+ TY+ +Y +A VYLILTS I Sbjct: 456 FREGQLIVAVTYKAFEVYIAVALVYLILTSLSSI 489 >gi|51245412|ref|YP_065296.1| amino acid ABC transporter, permease protein [Desulfotalea psychrophila LSv54] gi|50876449|emb|CAG36289.1| probable amino acid ABC transporter, permease protein [Desulfotalea psychrophila LSv54] Length = 221 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 78/198 (39%), Positives = 121/198 (61%), Gaps = 3/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++ ++P +L + T + SF+++++ G + V R + + L+ YV F Sbjct: 6 FEILKTAYP-MLCQGVWATAKVVFFSFILAMLFGLIVGVAR--YRSRSLYLLFSPYVEFF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLL+QLF I+YGLP IGI DSF A + L LN AYISEIIR S++S+ + Q +AS Sbjct: 63 RGTPLLIQLFFIYYGLPTIGISMDSFTAACLGLGLNGGAYISEIIRGSLLSVDQDQLEAS 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 YA+GLT Q++ ++I PQ T + PL + F S+LK TS+ S + I E+ + Q I + T Sbjct: 123 YALGLTWFQSMVYVIFPQAFTVAIPPLVNSFSSLLKDTSLVSVLAITELTRVGQLIYTRT 182 Query: 186 YQPLIIYCELAFVYLILT 203 ++ IY + +Y ++T Sbjct: 183 FRAFEIYLAIGMLYFMMT 200 >gi|317048166|ref|YP_004115814.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316949783|gb|ADU69258.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 223 Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 72/193 (37%), Positives = 128/193 (66%), Gaps = 1/193 (0%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 ++P+LL A V T+ + + +IS +G I + R+ ++ + + YV RGTPLL Sbjct: 12 AWPELLSGAWV-TIEVTLCALLISCCLGTLIGLGRLTPQRKLVWWLCNSYVVFVRGTPLL 70 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 VQLF++++GLP+ IV +FV II L +AY+SE++R +I+SI +GQ +A+ ++G++ Sbjct: 71 VQLFILYFGLPYFNIVIPAFVCGIIGLGCYSAAYVSELVRGAILSIDRGQSEAARSMGMS 130 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 Q +R IILPQ + PL++EFI++ K++++ S +TI ++ Q+++S +Y+ L + Sbjct: 131 AAQAMRLIILPQALVRMVPPLANEFIALTKNSALVSLVTIHDLMHEGQKVISVSYRSLEV 190 Query: 192 YCELAFVYLILTS 204 Y +AF+YL++TS Sbjct: 191 YIVIAFIYLLMTS 203 >gi|323489528|ref|ZP_08094755.1| putative ABC transporter (permease) [Planococcus donghaensis MPA1U2] gi|323396659|gb|EGA89478.1| putative ABC transporter (permease) [Planococcus donghaensis MPA1U2] Length = 225 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 80/213 (37%), Positives = 133/213 (62%), Gaps = 2/213 (0%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L I S P +L I TL I+ +S ++ +IIGFF+++ R I+ Y+ RG Sbjct: 14 LAIKSLPYVL-EGIGYTLLISVVSMIVGVIIGFFLSLARTS-QLKILQFPARLYISFMRG 71 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 P+LV LF++++ LP +GI F + A +I ++N +AYI+E+ RSS+ S+ KGQW++S A Sbjct: 72 VPILVILFLLYFALPVVGIEFTAVQAALIGFSINSAAYIAEVFRSSLASVDKGQWESSKA 131 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GLT Q++R IILPQ+I + PLS+ ++ ++K++S+A+ IT+PEIFQ A+ + + Y Sbjct: 132 LGLTYWQSMRRIILPQSIRIALPPLSNVYLDLIKASSLAAMITVPEIFQKARIVGAREYD 191 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 L + +A +Y + S I+Q +E + Sbjct: 192 LLTMLILVALIYWAICSIMTILQNYLEKKYADY 224 >gi|107022625|ref|YP_620952.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|105892814|gb|ABF75979.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia cenocepacia AU 1054] Length = 240 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 69/159 (43%), Positives = 108/159 (67%), Gaps = 3/159 (1%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ + YV + RGTPLLVQ+FVI+YGLP +GI D A +I+L+ N +AY+SE +R Sbjct: 69 NALAWLARAYVSLMRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMR 128 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 +I I +GQW A+Y++GL+ QT+R++I PQ + + LS+ IS++K TS+ S IT+ Sbjct: 129 GAINGIARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITV 188 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 E+ ++AQ +++ TYQPL +Y A VY +L C I++ Sbjct: 189 TELLRSAQEVIAATYQPLPLYLAAAAVYWVL---CQILE 224 >gi|33601620|ref|NP_889180.1| glutamine transport system permease [Bordetella bronchiseptica RB50] gi|33576057|emb|CAE33136.1| glutamine transport system permease [Bordetella bronchiseptica RB50] Length = 222 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 124/209 (59%), Gaps = 1/209 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + F LL A+V AC + ++ +IG + V R+ I + Y+ F Sbjct: 5 FAPVFADFDALLRGAVVTVEVTAC-ALLLGCVIGLLVGVGRLNPQRRFIYNLCSVYLLFF 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+ F+GLP GI +F ++ L + AY+SEI+R +I S+ +GQ +A+ Sbjct: 64 RGTPLLVQLFIWFFGLPQFGITLPAFACGVLGLGIYSGAYVSEIVRGAIQSVDRGQMEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G++ Q +R IILPQ + PL +EFI+++K++++ S +TI ++ Q+I+S + Sbjct: 124 RSLGMSSAQAMRIIILPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVS 183 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Y+ L Y +A +YL+LT+ I +IE Sbjct: 184 YRSLETYLVVALIYLVLTTATTTILRRIE 212 >gi|322420999|ref|YP_004200222.1| polar amino acid ABC transporter inner membrane subunit [Geobacter sp. M18] gi|320127386|gb|ADW14946.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter sp. M18] Length = 339 Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 75/174 (43%), Positives = 113/174 (64%), Gaps = 2/174 (1%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 PQLL A++ + CI +IS + G IA+ RI + IS I ++W+FRGTPLL+Q Sbjct: 133 PQLLKGAVMTITLVVCI-ILISPVGGLLIALGRIS-TFKPISGICWLFIWLFRGTPLLLQ 190 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LF I+YGLP +G+ F F A I+ L LN+SAY+ EIIR I SI GQ +A+ AIG+T Sbjct: 191 LFFIYYGLPSLGVTFKPFTAAILGLGLNYSAYLGEIIRGGIQSIEHGQMEAAKAIGMTYW 250 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 Q +R +I+PQT P+ +EFI+++K T++ STI + E+ ++A ++ + + Sbjct: 251 QAMRRVIIPQTYKRLMPPIGNEFIALIKDTALVSTIAMVELMRSADQMFNAYFN 304 >gi|238019429|ref|ZP_04599855.1| hypothetical protein VEIDISOL_01298 [Veillonella dispar ATCC 17748] gi|237864128|gb|EEP65418.1| hypothetical protein VEIDISOL_01298 [Veillonella dispar ATCC 17748] Length = 218 Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 82/204 (40%), Positives = 124/204 (60%), Gaps = 4/204 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + W LI D+ P LL A+V T+ I +S IG +++ + T++ L+ Sbjct: 1 MSFNW-GLIADNLPLLLQGALV-TVEITAMSVGCGFFIGLLVSLANLS-KFTVVRLLAKC 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV I RGTPLLVQ+F+I++ LP I G D F+A + + ++N AY+SEI R+ I SI K Sbjct: 58 YVDIIRGTPLLVQIFLIYFALPMITGQRIDPFIAAVTACSINSGAYVSEIFRAGIQSIDK 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A ++GLT QT+R+II+PQ PL +EFI++LK +S+ S I E+ + Q Sbjct: 118 GQMEAGRSLGLTWGQTMRYIIMPQAFKAIIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I++ TY I+ +A +YLI+T Sbjct: 178 LIIAKTYASFEIWGTVAVIYLIMT 201 >gi|296272082|ref|YP_003654713.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter nitrofigilis DSM 7299] gi|296096257|gb|ADG92207.1| polar amino acid ABC transporter, inner membrane subunit [Arcobacter nitrofigilis DSM 7299] Length = 224 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 90/211 (42%), Positives = 134/211 (63%), Gaps = 7/211 (3%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 FP +L+ I +T+ +A I VI+L I IA+++ + +IS Y+ RGTPLLV Sbjct: 13 FP-ILFKYIDITVSMALIGTVIALFIAILIAIMKTY-KVKVISQFCDLYISFLRGTPLLV 70 Query: 73 QLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 QLF+++YGLP I VF DS+ A I L+L+FSAY++E IR +I SI KGQ++AS ++G Sbjct: 71 QLFLLYYGLPQIFPVFANLDSYSASIAGLSLHFSAYMAESIRGAISSIDKGQFEASSSLG 130 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+ QT +IILPQ I + L + FI ++KSTS+A T+ +PEI AQ S++Y+ Sbjct: 131 LSNTQTFIYIILPQAIRVAVPSLMNNFIDLIKSTSLAFTLGVPEIMAKAQLEASSSYKYF 190 Query: 190 IIYCELAFVY-LILTSFCYIIQIKIESSVTQ 219 + +A VY +I+ F Y IQ K+E + + Sbjct: 191 ESFLAVALVYWVIVLVFTY-IQKKLEKKLNK 220 >gi|186683156|ref|YP_001866352.1| polar amino acid ABC transporter inner membrane subunit [Nostoc punctiforme PCC 73102] gi|186465608|gb|ACC81409.1| polar amino acid ABC transporter, inner membrane subunit [Nostoc punctiforme PCC 73102] Length = 501 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 8/202 (3%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +I+ +FP LL A+V TL + IS V LI G I ++R+ T + + YV FRG Sbjct: 281 VILQAFPTLLQGALV-TLQLTIISVVFGLIGGSLIGIVRLS-RITPVRWLARAYVDFFRG 338 Query: 68 TPLLVQLFVIFYGLPHIG------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 TPLLVQ+F+I++GLP I FD A II+L+LN +AY +E++R+ I SI GQ Sbjct: 339 TPLLVQIFMIYFGLPAISQEIGFTFTFDRLTAGIIALSLNNAAYTAEVVRAGIQSIETGQ 398 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++GL+ QT+ ++I PQ PL ++FIS+LK TS+ S I + E+ + Q I Sbjct: 399 AEAAQSLGLSSIQTMSYVIFPQAFRRMIPPLGNDFISLLKDTSLVSVIGLEELLRKGQLI 458 Query: 182 VSTTYQPLIIYCELAFVYLILT 203 V+ Y+ IY +A VYL LT Sbjct: 459 VADNYRAFEIYAGVAVVYLCLT 480 >gi|15807268|ref|NP_295998.1| amino acid ABC transporter permease [Deinococcus radiodurans R1] gi|6460085|gb|AAF11824.1|AE002060_3 amino acid ABC transporter, permease protein [Deinococcus radiodurans R1] Length = 239 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 123/193 (63%), Gaps = 1/193 (0%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +PQLL + + VTL ++ + V+S+++G + ++R++ ++ I + YV + RG PL Sbjct: 22 GDYPQLLLSGLGVTLAVSLCALVVSVVVGTALGLVRVY-RVPLLGPIGNIYVEVVRGIPL 80 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 +V L VI++GLP +G+ F A +++L L +AY SEI+R + S+P GQ +A+ ++GL Sbjct: 81 IVLLSVIYFGLPTLGLTLAGFPAAVLALGLYSAAYTSEIVRGGLGSVPAGQIEAARSLGL 140 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 +R Q +R ++LPQ + L +EF+S++ +S+AS +T+ E+F + I + TY+ Sbjct: 141 SRGQALRFVVLPQAWRVALPALGNEFVSLILGSSLASAVTLQELFSQGRYITNATYRQFE 200 Query: 191 IYCELAFVYLILT 203 +Y LA +Y +LT Sbjct: 201 VYAVLAVIYFVLT 213 >gi|253574816|ref|ZP_04852156.1| L-cystine ABC transporter, permease [Paenibacillus sp. oral taxon 786 str. D14] gi|251845862|gb|EES73870.1| L-cystine ABC transporter, permease [Paenibacillus sp. oral taxon 786 str. D14] Length = 214 Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 77/214 (35%), Positives = 127/214 (59%), Gaps = 2/214 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 NL+ D+ P LL A TL + +S LIIG +A+ R+ + ++ I YV + Sbjct: 1 MNLVWDNLPFLLKGA-YYTLLVTVVSMFFGLIIGLVVAIARLK-GNWLVRGIARVYVSVI 58 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQ+F+++YG+ GI A ++L++N AY+SE R +I SIPKGQ +A+ Sbjct: 59 RGTPLLVQIFIVYYGVVDYGITLGPLTAAYVALSINVGAYLSETFRGAIQSIPKGQTEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 YA G+T T+R IILPQ + P+ + FI +LK T++ S IT+ E+ ++AQ +++ Sbjct: 119 YATGMTGWMTMRRIILPQAARVAIAPMGNTFIGMLKETALVSAITVTELLRSAQLLIAQY 178 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 Y + + +A +Y I+++ I +E +++ Sbjct: 179 YVYMPFFVGIAAMYWIMSTVFSAILNAVEKQLSK 212 >gi|260429682|ref|ZP_05783658.1| ABC transporter, membrane spanning protein (amino acid) [Citreicella sp. SE45] gi|260419165|gb|EEX12419.1| ABC transporter, membrane spanning protein (amino acid) [Citreicella sp. SE45] Length = 231 Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 76/192 (39%), Positives = 119/192 (61%), Gaps = 1/192 (0%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + S + ++ G +A++R+ ++S I +FY W+ RGTPLLVQL +I+ GLP Sbjct: 24 VTLGLTIASMTLGVVAGCVVALMRMS-PFRVLSNIAYFYTWLIRGTPLLVQLIIIYTGLP 82 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 IGI F A +I L +N +AY+SEIIRS I S+PKGQ +A+ A+G+T Q +R++I P Sbjct: 83 QIGIKFSVLEATLIGLVMNEAAYLSEIIRSGISSVPKGQSNAARAVGMTDVQMMRYVIAP 142 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q PL + LK+TS+AS I++ E+ + Q ++ + L ++ A YL++ Sbjct: 143 QAARIIIPPLGNSVNGCLKTTSIASIISMEELLRRTQVLIQEKFMVLELFVVAALYYLLM 202 Query: 203 TSFCYIIQIKIE 214 T+ +IQ +IE Sbjct: 203 TTAWDLIQRRIE 214 >gi|219670747|ref|YP_002461182.1| polar amino acid ABC transporter inner membrane subunit [Desulfitobacterium hafniense DCB-2] gi|219541007|gb|ACL22746.1| polar amino acid ABC transporter, inner membrane subunit [Desulfitobacterium hafniense DCB-2] Length = 224 Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 77/208 (37%), Positives = 129/208 (62%), Gaps = 9/208 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+ W L+++S LL ++ TL + + + ++IG F+A++R+ S + + Sbjct: 1 MELHW-ELMLESVNPLLKGTLI-TLELTAGAVAMGIVIGLFMALMRLSNSRILRGFAIA- 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSII 115 Y+ FRGTPLLVQ+ ++++ +P + + F F+A I ++ LN AYI+EI R+ I Sbjct: 58 YIDFFRGTPLLVQILMVYFAVPQL-LNFQIPDNYQFIAGISAMGLNSGAYIAEIFRAGIQ 116 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SI KGQ +A+ ++G+T+ Q +RH+ILPQ PL +EFI++LK +S+ S I + ++ Sbjct: 117 SIDKGQGEAARSLGMTQGQAMRHVILPQAFKRVIPPLGNEFIALLKDSSLVSFIALQDLM 176 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + IVS TYQP +IY E+A YL +T Sbjct: 177 YSGKLIVSRTYQPFVIYLEVALFYLAMT 204 >gi|217967440|ref|YP_002352946.1| polar amino acid ABC transporter, inner membrane subunit [Dictyoglomus turgidum DSM 6724] gi|217336539|gb|ACK42332.1| polar amino acid ABC transporter, inner membrane subunit [Dictyoglomus turgidum DSM 6724] Length = 218 Score = 141 bits (355), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 78/197 (39%), Positives = 122/197 (61%), Gaps = 2/197 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+ I+S P LL A VVTL ++ IS +I+G F+ + RI + ++ + YV + R Sbjct: 6 NIFIESIPYLLKGA-VVTLRLSVISVAFGIILGLFLGLARIS-KNYLLRIPSTIYVEVIR 63 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL +I+Y LP GI + A I+ L+LN +AY EI RS I SI KGQ +A+ Sbjct: 64 GTPLLMQLLIIYYALPSFGINLGAITAAIVGLSLNSAAYTGEIFRSGIQSIDKGQMEAAR 123 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+T Q +R+IILPQ PL++EF+S+LK +S+AST+ + E+ + + IV+ Sbjct: 124 SLGMTYFQAMRYIILPQAFRRILPPLTNEFVSMLKESSLASTLAVTELLRAGREIVAWKA 183 Query: 187 QPLIIYCELAFVYLILT 203 + + +YL++T Sbjct: 184 NVFSPFLGVTLIYLLMT 200 >gi|242280217|ref|YP_002992346.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242123111|gb|ACS80807.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 344 Score = 141 bits (355), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 133/220 (60%), Gaps = 8/220 (3%) Query: 2 KYEWFNLIIDS---FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 K EW + D P LL A +TL + + ++S I G FIA+ +I ++ I Sbjct: 123 KPEWQKTLEDCKRFMPNLLKGA-TMTLVLVFFTMIVSPIGGLFIALGKISRMQPFMA-IS 180 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 F +W FRGTPLL+QLF I+YGLP IGI A +I L +N+SAY++EIIR+ I SI Sbjct: 181 WFIIWFFRGTPLLLQLFFIYYGLPAIGITLSPLAAALIGLGINYSAYLAEIIRAGIESID 240 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +A+ A+G+T QT+R +I+PQT P+++EFI+++K T++ STI + E+ + A Sbjct: 241 DGQTEAAKALGMTYGQTMRRVIIPQTYKRIIPPIANEFIALIKDTALVSTIAMVELMRAA 300 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTS-FCYIIQIKIESSV 217 ++ + + + + A +YLI TS F + + KIE V Sbjct: 301 DQMFNAYFN-VTVLVMAAVIYLIFTSVFTFFFE-KIEYKV 338 >gi|332716558|ref|YP_004444024.1| amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] gi|325063243|gb|ADY66933.1| amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 229 Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 76/199 (38%), Positives = 120/199 (60%), Gaps = 1/199 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ +VTL + + L +GF IAV+R+ +S +FY WIFRGTPLLVQL + Sbjct: 18 LFEGAMVTLGLTVFAMTAGLALGFVIAVMRMS-KYRFLSGPAYFYTWIFRGTPLLVQLII 76 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 I+ GLP +GI + +I L+L +AY+SEI+R+ I ++PKGQ +A+ AIG+T Q + Sbjct: 77 IYTGLPQLGIKLTVLQSTLIGLSLCEAAYLSEIVRAGIAAVPKGQINAARAIGMTEAQVM 136 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 R+I+ PQ PL + +LK+TS+AS I++ E+ + Q ++ + L ++ A Sbjct: 137 RYIVAPQAFRIIIPPLGNSVNGVLKTTSIASIISMEELLRRTQVLIQEKFLVLELFMVAA 196 Query: 197 FVYLILTSFCYIIQIKIES 215 YL +T+ +IQ +IE Sbjct: 197 LYYLAMTTAWELIQRRIEK 215 >gi|121535518|ref|ZP_01667327.1| polar amino acid ABC transporter, inner membrane subunit [Thermosinus carboxydivorans Nor1] gi|121305937|gb|EAX46870.1| polar amino acid ABC transporter, inner membrane subunit [Thermosinus carboxydivorans Nor1] Length = 221 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 82/205 (40%), Positives = 128/205 (62%), Gaps = 6/205 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMH 59 M ++ F+L++ SFP LL A +T+ I IS I L+IG F+ + R+ S+ ++ Sbjct: 1 MNFD-FDLVVRSFP-LLLAGAGITVQITAISVGIGLLIGMFVGMARL--SNIWLLRAAAT 56 Query: 60 FYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV RGTPLLVQ+F+I++ +P IG D F+A I + +N AY++EI R+ I SI Sbjct: 57 VYVDFLRGTPLLVQIFIIYFAIPIVIGQRIDPFIAAITACGINSGAYVAEIFRAGIQSID 116 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A ++G++ QT+R+IILPQ PL +EFI++LK +S+ S I E+ + Sbjct: 117 KGQMEAGRSLGMSWAQTMRYIILPQAFKRIIPPLGNEFIAMLKDSSLVSVIGFEELTRRG 176 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT 203 Q I++ TY I+ +AF+YL++T Sbjct: 177 QLIIARTYGSFEIWLTVAFIYLVMT 201 >gi|218438819|ref|YP_002377148.1| polar amino acid ABC transporter inner membrane protein [Cyanothece sp. PCC 7424] gi|218171547|gb|ACK70280.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7424] Length = 513 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 80/199 (40%), Positives = 123/199 (61%), Gaps = 8/199 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ V+T+ + S LI G +A + + I+ L+ YV FRGTP+LVQLF+ Sbjct: 292 LFRGAVITVILTAFSVFFGLIGGTLVA-LALISPYQILRLLFRIYVDFFRGTPMLVQLFI 350 Query: 77 IFYGLP-----HIGIVF--DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 I++GLP ++GI + D F A +++L+LN +AY++EIIR I SI KGQW+A ++G Sbjct: 351 IYFGLPALFQQYLGIEWSLDRFPAAVMALSLNVAAYLAEIIRGGIQSIDKGQWEACESLG 410 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 +T QT++ +I PQ PL +EFI+++K TS+ + I E+F+ Q IV+ TY+ Sbjct: 411 MTPFQTMQDVIFPQAFRRILPPLGNEFITLIKDTSLTAIIGFQELFREGQLIVAVTYKAF 470 Query: 190 IIYCELAFVYLILTSFCYI 208 +Y +A VYLILT+ I Sbjct: 471 EVYIAVALVYLILTTLSSI 489 >gi|134299235|ref|YP_001112731.1| polar amino acid ABC transporter, inner membrane subunit [Desulfotomaculum reducens MI-1] gi|134051935|gb|ABO49906.1| amino acid ABC transporter membrane protein, PAAT family [Desulfotomaculum reducens MI-1] Length = 223 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 125/212 (58%), Gaps = 2/212 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N II P LL A V+T+ + + +IG +A+ +I S I+ Y W+ R Sbjct: 9 NFIIKILPNLLLGA-VMTIKLTFFAITFGTLIGLLVALAKIS-SFKILRWFGGLYTWVIR 66 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G PLL+QL ++YGLP +G+ + F +I +++ AYI+EI+R+ I SI KGQ +A+ Sbjct: 67 GVPLLLQLMFLYYGLPFMGLTLNEFTVAVIGMSVCGGAYIAEIMRAGIQSIDKGQMEAAL 126 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+T Q +R +ILPQ P+ +EFI+++K +++ S I + E+ + A + + T+ Sbjct: 127 SMGMTYPQAMRRVILPQAYKRLLPPMGNEFITLMKDSALVSVICMTELLRAANLLQNATF 186 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 +P+ IY +YLI+T+F ++ ++E + Sbjct: 187 RPIEIYVVAGLLYLIMTTFFTMVVNRLEKKLA 218 >gi|153938371|ref|YP_001390528.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum F str. Langeland] gi|170756986|ref|YP_001780803.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum B1 str. Okra] gi|152934267|gb|ABS39765.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum F str. Langeland] gi|169122198|gb|ACA46034.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum B1 str. Okra] gi|295318609|gb|ADF98986.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum F str. 230613] Length = 222 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 127/200 (63%), Gaps = 4/200 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL IA +S +I+++ G +AVIR++ + S I Y+ FRGTP+L+QLF+ +YGLP Sbjct: 22 ITLSIAILSMIIAVLFGVILAVIRMYKVKVLHS-ISEIYISFFRGTPILIQLFLFYYGLP 80 Query: 83 HIGIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 I F +++A++I+L++N SAY++EIIR +I+SI KGQ +AS ++G+T Q ++ I Sbjct: 81 QIIPAFKEIPAYMAVVIALSMNGSAYMAEIIRGAIMSIDKGQMEASLSLGMTEFQAMKRI 140 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L + FI +LKS+S+A T+ + EI AQ +++Y+ Y +A +Y Sbjct: 141 ILPQAARVAIPSLGNSFIDLLKSSSLAFTVGVAEILSKAQMNAASSYRFFESYLAVALIY 200 Query: 200 LILTSFCYIIQIKIESSVTQ 219 ++ +Q +E + + Sbjct: 201 WVMVELFNFMQKLLERKIGK 220 >gi|313893707|ref|ZP_07827274.1| glutamine ABC transporter, permease protein GlnP [Veillonella sp. oral taxon 158 str. F0412] gi|313441721|gb|EFR60146.1| glutamine ABC transporter, permease protein GlnP [Veillonella sp. oral taxon 158 str. F0412] Length = 218 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 81/204 (39%), Positives = 124/204 (60%), Gaps = 4/204 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + W LI D+ P LL A+V T+ I +S IG +++ + +++ L+ Sbjct: 1 MSFNW-GLIADNLPLLLQGALV-TVEITAMSVGCGFFIGLLVSLANLS-KFSLVRLLAKC 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV I RGTPLLVQ+F+I++ LP I G D F+A + + ++N AY+SEI R+ I SI K Sbjct: 58 YVDIIRGTPLLVQIFLIYFALPMITGQRIDPFIAAVTACSINSGAYVSEIFRAGIQSIDK 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A ++GLT QT+R+II+PQ PL +EFI++LK +S+ S I E+ + Q Sbjct: 118 GQMEAGRSLGLTWGQTMRYIIMPQAFKAIIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I++ TY I+ +A +YLI+T Sbjct: 178 LIIAKTYASFEIWGTVAVIYLIMT 201 >gi|282856549|ref|ZP_06265823.1| gln/Arg/Lys/His-binding protein and permease protein [Pyramidobacter piscolens W5455] gi|282585615|gb|EFB90909.1| gln/Arg/Lys/His-binding protein and permease protein [Pyramidobacter piscolens W5455] Length = 519 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 127/199 (63%), Gaps = 1/199 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A VVTL ++ S ++L +G FIAV R+F + + + +I RGTP+++QLF IFY Sbjct: 303 AAVVTLEVSIASMALALAVGLFIAVCRLFGPLPLRAFATGYTEFI-RGTPVMIQLFFIFY 361 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP++G+ FVA ++L LN++AY SE R+ + ++P+ Q + + A+G+T+++ +RH+ Sbjct: 362 GLPNVGVQLSPFVAGTLALGLNYAAYESENYRAGLEAVPRAQMEGALALGMTKREALRHV 421 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ I S +P++++FI++LK +S+ S IT+ ++ +T ++ + Y +A +Y Sbjct: 422 ILPQAIRVSLLPMTNDFIALLKDSSLVSIITLVDLTRTYGQLATVNYDYFGTGFIVAVIY 481 Query: 200 LILTSFCYIIQIKIESSVT 218 L++ + I K+E + Sbjct: 482 LLIGTPFVRIARKLEKKLN 500 >gi|187780209|ref|ZP_02996682.1| hypothetical protein CLOSPO_03805 [Clostridium sporogenes ATCC 15579] gi|187773834|gb|EDU37636.1| hypothetical protein CLOSPO_03805 [Clostridium sporogenes ATCC 15579] Length = 222 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 127/200 (63%), Gaps = 4/200 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL IA +S +I++++G +AVIR++ I I Y+ FRGTP+L+QLF+ +YGLP Sbjct: 22 ITLSIAILSMIIAVLLGVILAVIRMY-KVKIFHRISEIYISFFRGTPILIQLFLFYYGLP 80 Query: 83 HIGIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 I F +++A++I+L++N SAY++EIIR +I+SI KGQ +AS ++G+T Q ++ I Sbjct: 81 QIIPSFKEIPAYMAVVIALSMNCSAYMAEIIRGAIMSIDKGQMEASLSLGMTEFQAMKRI 140 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L + FI +LKS+S+A T+ + EI AQ +++Y+ Y +A +Y Sbjct: 141 ILPQAARVAIPSLGNSFIDLLKSSSLAFTVGVAEILSKAQMNAASSYRFFESYLAVALIY 200 Query: 200 LILTSFCYIIQIKIESSVTQ 219 ++ +Q +E + + Sbjct: 201 WVMVELFNFMQKLLERKIGK 220 >gi|94986086|ref|YP_605450.1| amino acid ABC transporter permease [Deinococcus geothermalis DSM 11300] gi|94556367|gb|ABF46281.1| amino acid ABC transporter membrane protein, PAAT family [Deinococcus geothermalis DSM 11300] Length = 223 Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 65/154 (42%), Positives = 104/154 (67%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I YV RGTPLLVQ+F+I+YGLP GI V + +LTLN +AY+SE IR++I+S Sbjct: 59 ISGVYVSFMRGTPLLVQIFMIYYGLPSFGITVSPLVGGVAALTLNSAAYLSETIRAAILS 118 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQW+A+Y++GLT +QT++ I+LPQ + L + I ++K TS+ S IT+ E+ + Sbjct: 119 VPRGQWEAAYSLGLTPRQTLQLIVLPQAARVALPSLGNTLIGLVKDTSLVSVITVVELLR 178 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 +AQ +++ T++P Y A +Y ++S ++Q Sbjct: 179 SAQLVIARTFEPFGPYLAAALIYWAISSLLELVQ 212 >gi|159029917|emb|CAO90296.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 503 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 79/213 (37%), Positives = 127/213 (59%), Gaps = 11/213 (5%) Query: 12 SFPQLLYAAIVVTLP----IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 ++ +L Y IV +P + +SF+ LI G +A I + + +I YV FRG Sbjct: 277 NWGELFYNLIVKGVPWTILLTVLSFLFGLIGGTLVA-IALISPYKWLKIICRIYVDFFRG 335 Query: 68 TPLLVQLFVIFYGLPHI------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 TP+LVQLF+I++GLP + I D A + +L+LN +AY++EI+R I SI GQ Sbjct: 336 TPMLVQLFLIYFGLPGLFREIGLNIDLDRLPAALFALSLNVAAYLAEIMRGGIQSIDNGQ 395 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A ++G++ QT+ +I PQ PL +EFI+++K TS+A+ I E+F+ Q + Sbjct: 396 WEACSSLGMSPVQTMHEVIFPQAFRRMLPPLGNEFITLIKDTSLAAVIGFEELFRQGQLM 455 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 V+TTY+ IY +A VYL+LT+ ++ ++E Sbjct: 456 VATTYKAFEIYIAVALVYLVLTTLSSLVFKRLE 488 >gi|298504919|gb|ADI83642.1| ABC transporter, membrane protein [Geobacter sulfurreducens KN400] Length = 340 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 85/204 (41%), Positives = 127/204 (62%), Gaps = 7/204 (3%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL A++ L + C F IS I G IA+ RI + +S + F +W+FRGTPLL+ Sbjct: 133 LPVLLKGAVMTLLLVLCTMF-ISPIGGLLIALGRIS-TFRPLSALCWFVIWLFRGTPLLL 190 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I+YGLP +GI A +I L LN+SAY+ EIIR +I SI GQ +A+ A+G+T Sbjct: 191 QLFFIYYGLPSLGITLKPITAAVIGLGLNYSAYLGEIIRGAIQSIDHGQTEAAKALGMTY 250 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLI 190 QT+R +++PQT P+ +EFI+++K T++ STI + E+ + A ++ +T + LI Sbjct: 251 GQTMRRVVIPQTYKRLMPPIGNEFIALIKDTALVSTIAMVELMRAADQMFNTYFNVTALI 310 Query: 191 IYCELAFVYLILTSFCYIIQIKIE 214 + A +YLI T+F + KIE Sbjct: 311 LA---AVIYLIFTTFFTFLFEKIE 331 >gi|148379165|ref|YP_001253706.1| amino acid ABC transporter permease [Clostridium botulinum A str. ATCC 3502] gi|153932298|ref|YP_001383541.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A str. ATCC 19397] gi|153936492|ref|YP_001387090.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A str. Hall] gi|168178599|ref|ZP_02613263.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum NCTC 2916] gi|226948447|ref|YP_002803538.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A2 str. Kyoto] gi|148288649|emb|CAL82730.1| putative cystine ABC transporter, permease protein [Clostridium botulinum A str. ATCC 3502] gi|152928342|gb|ABS33842.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A str. ATCC 19397] gi|152932406|gb|ABS37905.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A str. Hall] gi|182670787|gb|EDT82761.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum NCTC 2916] gi|226842057|gb|ACO84723.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A2 str. Kyoto] gi|322805500|emb|CBZ03064.1| amino acid ABC transporter, permease protein [Clostridium botulinum H04402 065] Length = 222 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 127/200 (63%), Gaps = 4/200 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL IA +S +I+++ G +AVIR++ + S I Y+ FRGTP+L+QLF+ +YGLP Sbjct: 22 ITLSIAILSMIIAVLFGVILAVIRMYKVKVLHS-ISEIYISFFRGTPILIQLFLFYYGLP 80 Query: 83 HIGIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 I F +++A++I+L++N SAY++EIIR +I+SI KGQ +AS ++G+T Q ++ I Sbjct: 81 QIIPAFKEIPAYMAVVIALSMNGSAYMAEIIRGAIMSIDKGQMEASLSLGMTEFQAMKRI 140 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L + FI +LKS+S+A T+ + EI AQ +++Y+ Y +A +Y Sbjct: 141 ILPQAARIAIPSLGNSFIDLLKSSSLAFTVGVAEILSKAQMNAASSYRFFESYLAVALIY 200 Query: 200 LILTSFCYIIQIKIESSVTQ 219 ++ +Q +E + + Sbjct: 201 WVMVELFNFMQKLLERKIGK 220 >gi|52078834|ref|YP_077625.1| amino acid ABC transporter permease [Bacillus licheniformis ATCC 14580] gi|52784205|ref|YP_090034.1| YckA [Bacillus licheniformis ATCC 14580] gi|319648872|ref|ZP_08003081.1| YckA protein [Bacillus sp. BT1B_CT2] gi|52002045|gb|AAU21987.1| Amino acid ABC transporter, permease protein YckA [Bacillus licheniformis ATCC 14580] gi|52346707|gb|AAU39341.1| YckA [Bacillus licheniformis ATCC 14580] gi|317388866|gb|EFV69684.1| YckA protein [Bacillus sp. BT1B_CT2] Length = 227 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 131/209 (62%), Gaps = 2/209 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L SFP ++ I TL I+ S LI+GFFIA+ R+ ++ Y+ R Sbjct: 13 ELAAKSFPYVM-QGIWNTLFISFASMFAGLILGFFIALGRMS-GLALLRWPARIYISFMR 70 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G P+LV LF++++G P+IGI F + A +I ++N +AYI+EIIRS++ S+ +GQWDA+ Sbjct: 71 GVPILVILFILYFGFPYIGIQFTALAAALIGFSINSAAYIAEIIRSALSSVDRGQWDAAK 130 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G + QT+RH+I+PQ++ + PL++ + ++K++S+A+ IT+PE+FQ A+ + + Sbjct: 131 SVGFSYWQTMRHVIVPQSVRIALPPLANVMLDLVKASSLAAMITVPELFQQAKIVGGREF 190 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIES 215 + +Y +A +Y + S ++Q +E Sbjct: 191 DYMTMYILVALIYWAICSGIALLQDFLEK 219 >gi|222151671|ref|YP_002560827.1| ABC-type amino acid transport system permease component [Macrococcus caseolyticus JCSC5402] gi|222120796|dbj|BAH18131.1| ABC-type amino acid transport system permease component [Macrococcus caseolyticus JCSC5402] Length = 242 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 129/220 (58%), Gaps = 11/220 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L+ I ++PI +F+I LII A++R+ + I YV I RGTP+ Sbjct: 21 QAFEPMLWGLIKYSIPITIATFIIGLIIAIITALMRVS-RNKFARSIARIYVSIIRGTPM 79 Query: 71 LVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 LVQLF+IFYG+P +G + VA II L+LN AY SEIIR I+SIP G Sbjct: 80 LVQLFIIFYGIPEVGRLITGNPDIKLNIAPVVAAIIGLSLNVGAYASEIIRGGILSIPDG 139 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y+IG++ T++ I+LPQ I S L + F+S++K TS+ I + E+F+ AQ Sbjct: 140 QKEAAYSIGMSEWMTMKRIVLPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQE 199 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + +TTY+ L IY + +Y I+ ++Q + ES + + Sbjct: 200 VAATTYEFLSIYVLVGLMYWIVCFIISVVQGQYESRIERK 239 >gi|282856550|ref|ZP_06265824.1| gln/Arg/Lys/His-binding protein and permease protein [Pyramidobacter piscolens W5455] gi|282585616|gb|EFB90910.1| gln/Arg/Lys/His-binding protein and permease protein [Pyramidobacter piscolens W5455] Length = 521 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 65/183 (35%), Positives = 123/183 (67%), Gaps = 1/183 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A VVTL ++ + +++++G +A+ R+F + I+S + Y+ I RGTP+L+QLF IFY Sbjct: 300 AAVVTLKVSVCAMSLAIVLGLLLAIARLF-APKILSRLATAYIEIVRGTPVLIQLFFIFY 358 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP+IGI F+A +I L +N++AY +E R+ ++++P+ Q + + A+G+ +KQ +R++ Sbjct: 359 GLPNIGIKLSPFMAGVIGLGMNYAAYEAENYRAGLMAVPRAQMEGALALGMDKKQALRYV 418 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ++PQ + S P++++FIS+LK +S+ S IT+ ++ + ++ +T Y I +A +Y Sbjct: 419 VIPQAVRVSLPPVTNDFISLLKDSSLVSMITLIDLTKAYGQLANTYYDYFGIGIMVAVIY 478 Query: 200 LIL 202 +L Sbjct: 479 FLL 481 >gi|17230679|ref|NP_487227.1| glutamine-binding periplasmic protein of glutamine ABC transporter [Nostoc sp. PCC 7120] gi|17132282|dbj|BAB74886.1| glutamine-binding periplasmic protein of glutamine ABC transporter [Nostoc sp. PCC 7120] Length = 501 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 87/214 (40%), Positives = 128/214 (59%), Gaps = 8/214 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 NLI+ P LL A+V T+ + +S V+ LI G IA+ R+ T L YV FR Sbjct: 274 NLILQFLPTLLQGALV-TIQLTILSTVLGLICGTLIALTRLS-QFTPARLFARAYVDFFR 331 Query: 67 GTPLLVQLFVIFYGLP----HIGIVF--DSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 GTPLLVQ+F+I++G+P +G F D +VA +I+L++N +AYI+EI+R+ I SI G Sbjct: 332 GTPLLVQIFMIYFGIPALAQQLGFTFNFDRWVAGVIALSVNAAAYIAEIVRAGIQSIETG 391 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++GL T+R +I PQ PL +EFIS+LK TS+ + I E+F+ Q Sbjct: 392 QTEAAKSLGLNPWLTMRLVIFPQAFRRMLPPLGNEFISLLKDTSLVAVIGFEELFRKGQL 451 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 IV+ Y+ IY +A VYL LT + ++E Sbjct: 452 IVADNYRAFEIYAAVAIVYLCLTLLASQVLSRLE 485 >gi|170758808|ref|YP_001786563.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A3 str. Loch Maree] gi|169405797|gb|ACA54208.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A3 str. Loch Maree] Length = 222 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 127/200 (63%), Gaps = 4/200 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL IA +S +I+++ G +AVIR++ + S I Y+ FRGTP+L+QLF+ +YGLP Sbjct: 22 ITLSIAILSMIIAVLFGVILAVIRMYKVKVLHS-ISEIYISFFRGTPILIQLFLFYYGLP 80 Query: 83 HIGIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 I F +++A++I+L++N SAY++EIIR +I+SI KGQ +AS ++G+T Q ++ I Sbjct: 81 QIIPSFKEIPAYMAVVIALSMNGSAYMAEIIRGAIMSIDKGQMEASLSLGMTEFQAMKRI 140 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L + FI +LKS+S+A T+ + EI AQ +++Y+ Y +A +Y Sbjct: 141 ILPQAARVAIPSLGNSFIDLLKSSSLAFTVGVAEILSKAQMNAASSYRFFESYLAVALIY 200 Query: 200 LILTSFCYIIQIKIESSVTQ 219 ++ +Q +E + + Sbjct: 201 WVMVELFNFMQKLLERKIGK 220 >gi|308513288|ref|NP_951856.3| amino acid ABC transporter permease [Geobacter sulfurreducens PCA] gi|39982669|gb|AAR34129.1| amino acid ABC transporter, permease protein [Geobacter sulfurreducens PCA] Length = 266 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 74/175 (42%), Positives = 112/175 (64%), Gaps = 2/175 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL A++ L + C F IS I G IA+ RI + +S + F +W+FRGTPLL+ Sbjct: 59 LPVLLKGAVMTLLLVLCTMF-ISPIGGLLIALGRIS-TFRPLSALCWFVIWLFRGTPLLL 116 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I+YGLP +GI A +I L LN+SAY+ EIIR +I SI GQ +A+ A+G+T Sbjct: 117 QLFFIYYGLPSLGITLKPITAAVIGLGLNYSAYLGEIIRGAIQSIDHGQTEAAKALGMTY 176 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 QT+R +++PQT P+ +EFI+++K T++ STI + E+ + A ++ +T + Sbjct: 177 GQTMRRVVIPQTYKRLMPPIGNEFIALIKDTALVSTIAMVELMRAADQMFNTYFN 231 >gi|323142137|ref|ZP_08076982.1| glutamine ABC transporter, permease protein GlnP [Phascolarctobacterium sp. YIT 12067] gi|322413397|gb|EFY04271.1| glutamine ABC transporter, permease protein GlnP [Phascolarctobacterium sp. YIT 12067] Length = 216 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 80/199 (40%), Positives = 122/199 (61%), Gaps = 3/199 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F L+ +SFP LL A +T+ I +S L+IG I + R+ S + + YV Sbjct: 3 FELMANSFP-LLLAGAAITVEITAMSVTFGLLIGCMIGIARLC-SIKPLRYFANVYVDFI 60 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQ+F++++ LP+I G D FVA I + ++N AY++EI R+ I SI KGQ +A Sbjct: 61 RGTPLLVQIFLVYFALPNIIGSRVDPFVAAISACSINSGAYVAEIFRAGIQSIDKGQMEA 120 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++G+T QT+R+II+PQ PL +EFI++LK +S+ S I E+ + Q I++ Sbjct: 121 GRSLGMTWAQTMRYIIMPQAFKRIIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQLIIAR 180 Query: 185 TYQPLIIYCELAFVYLILT 203 TY I+ +A +YLI+T Sbjct: 181 TYASFEIWMAVAIIYLIMT 199 >gi|294101083|ref|YP_003552941.1| polar amino acid ABC transporter, inner membrane subunit [Aminobacterium colombiense DSM 12261] gi|293616063|gb|ADE56217.1| polar amino acid ABC transporter, inner membrane subunit [Aminobacterium colombiense DSM 12261] Length = 520 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 67/176 (38%), Positives = 118/176 (67%), Gaps = 1/176 (0%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 SF +L A +VT+ ++ S V+++ +G +A+ +IF T++S + Y+ RGTP+L Sbjct: 292 SFLPILGKAAIVTMKVSIASMVLAIFLGLLLAMTKIF-GPTLLSRLAIGYIEAIRGTPVL 350 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +QLF IFYGLP+IGI F A I+ L LN++AY +E R+ ++S+P+ Q + + A+G+T Sbjct: 351 IQLFFIFYGLPNIGIKLSPFFAGILGLGLNYAAYEAENYRAGLLSVPRQQMEGALALGMT 410 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 R Q +RH++LPQ + + P++++FIS+LK +S+ S IT+ ++ + ++ +T Y Sbjct: 411 RWQALRHVVLPQALRVALPPVTNDFISLLKDSSLVSVITMVDLTKAYGQLATTYYD 466 >gi|288574423|ref|ZP_06392780.1| polar amino acid ABC transporter, inner membrane subunit [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570164|gb|EFC91721.1| polar amino acid ABC transporter, inner membrane subunit [Dethiosulfovibrio peptidovorans DSM 11002] Length = 217 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 75/199 (37%), Positives = 121/199 (60%), Gaps = 2/199 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++++ P LL A T+ + S V+ G + IR+ + L Y+++ Sbjct: 5 FSILLPYIPMLL-AGAWFTVKASLCSVVLGSAFGLIVGAIRVVPFAPVRGLAAT-YIYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+I++GLP +GI +FVA II L +N S Y+ EI+R I ++PKGQW+AS Sbjct: 63 RGTPLLVQLFLIYFGLPSLGINLPAFVAGIIGLGINSSGYVGEIVRGGIEAVPKGQWEAS 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GL+ +++R+IILPQ I + + +EF++++K +S+ ST+ I E+ Q++ S T Sbjct: 123 KMLGLSYLKSMRYIILPQAIRSMLPAIGNEFVTLIKESSLLSTLAITELTMAGQQVRSVT 182 Query: 186 YQPLIIYCELAFVYLILTS 204 Y + + +YL LTS Sbjct: 183 YASFETFIAVGIIYLCLTS 201 >gi|183396653|dbj|BAG28252.1| permease protein of amino acid ABC transporter [Desulfotignum balticum] Length = 220 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 77/198 (38%), Positives = 119/198 (60%), Gaps = 1/198 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ +I PQL AA +TL I SFV++L + + V+R I+ ++ YV IF Sbjct: 5 FSFLIPYVPQLATAA-RITLTIGVFSFVLALAVSVLVGVLRSGRLPWIVDFLLGVYVEIF 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL+QLF I+YGLP GIV A +I L+LN AY+SE +R++I S+ KGQ++A+ Sbjct: 64 RNTPLLIQLFFIYYGLPTFGIVLPPVTAAVIGLSLNSGAYMSEAVRAAISSVNKGQYEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +++G R Q HI+LPQ + L + F +++K TS+ S ++I E+ + +I + T Sbjct: 124 FSLGYNRYQVFLHIVLPQAFRIALPTLMNYFTTMIKETSLVSVLSIAELTRVGNQIYART 183 Query: 186 YQPLIIYCELAFVYLILT 203 P IY + VY ++T Sbjct: 184 LGPFEIYITIGAVYFVMT 201 >gi|269797857|ref|YP_003311757.1| polar amino acid ABC transporter inner membrane subunit [Veillonella parvula DSM 2008] gi|269094486|gb|ACZ24477.1| polar amino acid ABC transporter, inner membrane subunit [Veillonella parvula DSM 2008] Length = 218 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 80/204 (39%), Positives = 123/204 (60%), Gaps = 4/204 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + W LI D+ P LL A+V T+ I +S IG +++ + ++ L+ Sbjct: 1 MSFNW-GLIADNLPLLLQGALV-TVEITAMSVGCGFFIGLLVSLANLS-KFKLVRLLAKC 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV I RGTPLLVQ+F+I++ LP I G D ++A + + ++N AY+SEI R+ I SI K Sbjct: 58 YVDIIRGTPLLVQIFLIYFALPMITGQRIDPYIAAVTACSINSGAYVSEIFRAGIQSIDK 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A ++GLT QT+R+II+PQ PL +EFI++LK +S+ S I E+ + Q Sbjct: 118 GQMEAGRSLGLTWGQTMRYIIMPQAFKAIIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I++ TY I+ +A +YLI+T Sbjct: 178 LIIAKTYASFEIWGTVAVIYLIMT 201 >gi|116751368|ref|YP_848055.1| polar amino acid ABC transporter inner membrane subunit [Syntrophobacter fumaroxidans MPOB] gi|116700432|gb|ABK19620.1| polar amino acid ABC transporter, inner membrane subunit [Syntrophobacter fumaroxidans MPOB] Length = 221 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 134/209 (64%), Gaps = 3/209 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++ D+ P L+ + VT+ ++ +SF ++L+IG + ++R + + YV +F Sbjct: 6 FGILHDAAP-LILEGLRVTVYVSLLSFALALVIGVAVGILRS--KSPRMRAVFSPYVELF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLL+QLF I+YGLP +G+ DSF A ++ L LN AYISEIIR +++S+ KGQ DA+ Sbjct: 63 RGTPLLIQLFFIYYGLPTMGLTLDSFSAGVLGLGLNGGAYISEIIRGALLSVDKGQQDAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++ G + Q++ ++ILPQ ++ + PL S F ++LK +S+ S + I E+ + +Q I + T Sbjct: 123 FSFGFSWLQSMTYVILPQAVSVALPPLVSSFSALLKESSLVSVLAITELTRVSQLIYTRT 182 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIE 214 ++ L +Y + +Y ++T F + ++E Sbjct: 183 FRALEVYLAIGVLYFLMTWFVARLSKRLE 211 >gi|222082848|ref|YP_002542213.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727527|gb|ACM30616.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 231 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 123/224 (54%), Gaps = 7/224 (3%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMH 59 + W F + + T+ + +S LI+GF +A++R + T+ + Sbjct: 4 WSWSGFFGYLFNPFILGGVFTTIWLTVVSLTAGLILGFVLALMRRSPFRLAKTLAKI--- 60 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+W+FRGTPLLVQL ++ LP GI F A +I L LN +AY++EIIR+ I ++P+ Sbjct: 61 -YIWLFRGTPLLVQLIALYTALPQFGIRFTVIEAALIGLALNEAAYLAEIIRAGIEAVPE 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ A+ A+G+T +Q +RHI++PQ PL + +LK+TSV S I++ E+ + Q Sbjct: 120 GQARAARALGMTERQIMRHIVMPQAFKVIIPPLGNSVNGLLKTTSVTSVISMEELLRRTQ 179 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 ++ + L ++ A YL+LT+ +Q IE Q T S Sbjct: 180 VLIQEHFMVLELFAVAAIYYLLLTTLWDFVQNHIEKRFGQATNS 223 >gi|291295431|ref|YP_003506829.1| polar amino acid ABC transporter inner membrane subunit [Meiothermus ruber DSM 1279] gi|290470390|gb|ADD27809.1| polar amino acid ABC transporter, inner membrane subunit [Meiothermus ruber DSM 1279] Length = 216 Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 79/210 (37%), Positives = 132/210 (62%), Gaps = 3/210 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F LI +S P LL A V TL I +S V +++G +A+ R+ + L + Y+ + Sbjct: 3 FGLIRESLPFLLQGAWV-TLRITALSLVFGILLGTLVALARMSPLRWLSGLTLG-YIELL 60 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQ+F+IF+G+P + + F A +I+ ++N SAY++EI+R+ I SIPKGQ +A Sbjct: 61 RGTPLLVQIFLIFFGIPQLTQQQINEFAAGVIAFSINSSAYVAEILRAGIQSIPKGQREA 120 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G + QT+R+IILPQ T PL +E I++LK++S+ S I + E+ + Q I + Sbjct: 121 ALSLGFSPTQTLRYIILPQAFTRVIPPLVNEGITLLKNSSLLSAIAVVELTRAGQLISAR 180 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 T++P +Y ++ +YL +T + ++E Sbjct: 181 TFKPFEMYLAVSLIYLTMTLVLSFVARRLE 210 >gi|297565167|ref|YP_003684139.1| polar amino acid ABC transporter inner membrane subunit [Meiothermus silvanus DSM 9946] gi|296849616|gb|ADH62631.1| polar amino acid ABC transporter, inner membrane subunit [Meiothermus silvanus DSM 9946] Length = 216 Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 133/211 (63%), Gaps = 3/211 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F LI DS P LL A V TL I +S + + +G +A+ R+ + L + Y+ + Sbjct: 3 FGLIRDSLPFLLQGAWV-TLRITALSLIFGVFLGTLVALARMSPIRWLSGLTLG-YIELL 60 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQ+F+IF+G+P + + FVA +I+ ++N SAY++EI+R+ I SIPKGQ +A Sbjct: 61 RGTPLLVQIFLIFFGIPQLTQQQINEFVAGVIAFSINSSAYVAEILRAGIQSIPKGQREA 120 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G + QT+R+IILPQ PL +E I++LK++S+ S I + E+ + Q I + Sbjct: 121 ALSLGFSPTQTLRYIILPQAFIRVIPPLVNEGIALLKNSSLLSAIAVVELTRAGQLISAR 180 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 T++P +Y ++ +YL++T + ++E+ Sbjct: 181 TFKPFEMYLAVSLIYLVMTVILSFVARQLEA 211 >gi|282848846|ref|ZP_06258236.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745] gi|294791750|ref|ZP_06756898.1| glutamine ABC transporter, permease protein [Veillonella sp. 6_1_27] gi|294793611|ref|ZP_06758748.1| glutamine ABC transporter, permease protein [Veillonella sp. 3_1_44] gi|282581351|gb|EFB86744.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745] gi|294455181|gb|EFG23553.1| glutamine ABC transporter, permease protein [Veillonella sp. 3_1_44] gi|294456980|gb|EFG25342.1| glutamine ABC transporter, permease protein [Veillonella sp. 6_1_27] Length = 218 Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 80/204 (39%), Positives = 123/204 (60%), Gaps = 4/204 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + W LI D+ P LL A+V T+ I +S IG +++ + ++ L+ Sbjct: 1 MSFNW-GLIADNLPLLLQGALV-TVEITAMSVGCGFFIGLLVSLANLS-KFRLVRLLAKC 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV I RGTPLLVQ+F+I++ LP I G D ++A + + ++N AY+SEI R+ I SI K Sbjct: 58 YVDIIRGTPLLVQIFLIYFALPMITGQRIDPYIAAVTACSINSGAYVSEIFRAGIQSIDK 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A ++GLT QT+R+II+PQ PL +EFI++LK +S+ S I E+ + Q Sbjct: 118 GQMEAGRSLGLTWGQTMRYIIMPQAFKAIIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I++ TY I+ +A +YLI+T Sbjct: 178 LIIAKTYASFEIWGTVAVIYLIMT 201 >gi|320530119|ref|ZP_08031189.1| putative glutamine ABC transporter permease protein [Selenomonas artemidis F0399] gi|320137552|gb|EFW29464.1| putative glutamine ABC transporter permease protein [Selenomonas artemidis F0399] Length = 219 Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 80/199 (40%), Positives = 122/199 (61%), Gaps = 3/199 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 NLI++SFP LL A VT+ I +S I I+G +AV RI ++ ++ YV F Sbjct: 5 MNLIVNSFPLLLVGA-GVTIQITVLSTTIGFIVGLIVAVARIS-KLKLLRILAEVYVEFF 62 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQ+F+ ++ LP I G D F+A I + +N AY++EI R+ I S+ GQ +A Sbjct: 63 RGTPLLVQIFLFYFALPVITGQRIDPFIAAISACGINSGAYVAEIFRAGIQSVDAGQMEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++G+T QT+R+II+PQ PL +EFI++LK +S+ S I E+ + Q I++ Sbjct: 123 GRSLGMTWIQTMRYIIVPQAFKRVIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQLIIAK 182 Query: 185 TYQPLIIYCELAFVYLILT 203 TY + I+ +A +YL +T Sbjct: 183 TYGSMEIWLSVAVIYLAMT 201 >gi|27378421|ref|NP_769950.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27351569|dbj|BAC48575.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 243 Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 73/214 (34%), Positives = 125/214 (58%), Gaps = 1/214 (0%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F L ++VT+ + + + LI+G IA++R+ S+ ++S FY+W FRGTPLL+ Sbjct: 14 FNYFLMKGVLVTIGLTVAAVIGGLILGMGIALMRMS-SNPVLSGASRFYIWFFRGTPLLI 72 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QL VI+ GLP +GI F ++ L LN +AY++EI+RS +++ GQ +A++A+ L+ Sbjct: 73 QLVVIYSGLPQLGIKFSVITCALVGLILNEAAYLAEIVRSGFMAVSAGQREAAWALSLSP 132 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 T R + LPQ PL + S+LK+TS+AS I++ E+ + + ++ +Q L +Y Sbjct: 133 WVTFRRVTLPQAFRLMIPPLGNSINSLLKATSLASVISVEELMRRSDMLMQEHFQILEVY 192 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 YLILTS +Q ++E + + + + Sbjct: 193 AAATAYYLILTSVWDAVQRRLEKHFGRSSAAKSR 226 >gi|329766800|ref|ZP_08258330.1| hypothetical protein HMPREF0428_00027 [Gemella haemolysans M341] gi|328839311|gb|EGF88893.1| hypothetical protein HMPREF0428_00027 [Gemella haemolysans M341] Length = 213 Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 76/200 (38%), Positives = 127/200 (63%), Gaps = 1/200 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A V TL I+ I+ ++ LI+G I + +I + ++++I YV + R TP+LVQ+ +I++ Sbjct: 15 ATVTTLKISLIALLVGLILGIVICLAKIS-TFKVLNIIAAIYVEVIRNTPILVQIMIIYF 73 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 LP IGI F F++ II+L++N AY+SEI RS I++I KGQ +A ++GL+ QT++ I Sbjct: 74 ALPEIGISFTPFMSAIIALSINSGAYVSEIFRSGILAIDKGQMEAGRSLGLSYFQTMKLI 133 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + S L +EFIS++K +S+ + + +I TA + + TYQ Y A +Y Sbjct: 134 ILPQALKNSLPALGNEFISLVKESSIVYFVGVADIMFTANTVKNATYQTFGPYLVAAAIY 193 Query: 200 LILTSFCYIIQIKIESSVTQ 219 I+TS ++ ++E +T+ Sbjct: 194 FIITSILSLLVKRLEKKLTK 213 >gi|168183031|ref|ZP_02617695.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Bf] gi|237794466|ref|YP_002862018.1| amino acid ABC transporter permease [Clostridium botulinum Ba4 str. 657] gi|182673740|gb|EDT85701.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Bf] gi|229261625|gb|ACQ52658.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Ba4 str. 657] Length = 222 Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 127/200 (63%), Gaps = 4/200 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL IA +S +I+++ G +AVIR++ + S I Y+ FRGTP+L+QLF+ +YGLP Sbjct: 22 ITLSIAILSMIIAVLFGVILAVIRMYKVKFLHS-ISEIYISFFRGTPILIQLFLFYYGLP 80 Query: 83 HIGIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 I F +++A++I+L++N SAY++EIIR +I+SI KGQ +AS ++G+T Q ++ I Sbjct: 81 QIIPSFKEIPAYMAVVIALSMNGSAYMAEIIRGAIMSIDKGQMEASLSLGMTEFQAMKRI 140 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L + FI +LKS+S+A T+ + EI AQ +++Y+ Y +A +Y Sbjct: 141 ILPQAARVAIPSLGNSFIDLLKSSSLAFTVGVAEILSKAQMNAASSYRFFESYLAVALIY 200 Query: 200 LILTSFCYIIQIKIESSVTQ 219 ++ +Q +E + + Sbjct: 201 WVMVELFNFMQKLLERRIGK 220 >gi|331270072|ref|YP_004396564.1| amino acid ABC transporter permease [Clostridium botulinum BKT015925] gi|329126622|gb|AEB76567.1| amino acid ABC transporter, permease component [Clostridium botulinum BKT015925] Length = 215 Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 78/214 (36%), Positives = 130/214 (60%), Gaps = 2/214 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +++ + FP LL + V+T+ + I ++ IIG +A +++ ++ I FY W+FR Sbjct: 4 DILKNMFPVLLEGS-VITIQLTVICVILGSIIGIIVAGLKLSKHKWVL-YIASFYTWLFR 61 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTP+ +QLF +YGLP +GI A II L+LN AY+SEIIR IISI KGQ++A Sbjct: 62 GTPMFLQLFFFYYGLPFLGISLTPMAAAIIGLSLNSGAYMSEIIRGGIISIDKGQFEACK 121 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G T Q + +ILPQT + +EFI++LK TS+ S IT+ E+ + A+ +S + Sbjct: 122 SLGFTNLQAMTRVILPQTFRIILPSVGNEFITMLKDTSLVSAITMEELMRNAELQMSASG 181 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +P+ + A +YL++T+ +I +E ++ + Sbjct: 182 RPVEPFIIAAVLYLLMTTVFSVIFSLLEKKMSMY 215 >gi|260654207|ref|ZP_05859697.1| amino acid ABC transporter, permease protein/periplasmic amino acid-binding protein, His/Glu/Gln/Arg/opine family [Jonquetella anthropi E3_33 E1] gi|260630840|gb|EEX49034.1| amino acid ABC transporter, permease protein/periplasmic amino acid-binding protein, His/Glu/Gln/Arg/opine family [Jonquetella anthropi E3_33 E1] Length = 521 Score = 137 bits (346), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 67/191 (35%), Positives = 124/191 (64%), Gaps = 1/191 (0%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 SF + A +VTL ++ + +++++G +AV R+F + +L + Y+ + RGTP+L Sbjct: 294 SFLPVFGRAALVTLQVSLAAMALAIVLGMVLAVARLFGPRWLSALAVG-YIELLRGTPVL 352 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +QLF IFYGLP++GI F A II L +N++AY +E R+ ++++P+ Q + + A+G+T Sbjct: 353 IQLFFIFYGLPNVGIKLSPFAAGIIGLGMNYAAYEAENYRAGLMAVPRQQMEGALALGMT 412 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 R Q +RH+++PQ I S P++++FIS+LK +S+ S IT+ ++ + ++ +T Y I Sbjct: 413 RSQALRHVVVPQAIRVSLPPVTNDFISLLKDSSLVSMITLIDLTKAYGQLANTYYDFFGI 472 Query: 192 YCELAFVYLIL 202 +A +Y ++ Sbjct: 473 GIMVALIYFLI 483 >gi|303229872|ref|ZP_07316648.1| putative glutamine ABC transporter, permease protein GlnP [Veillonella atypica ACS-134-V-Col7a] gi|303232148|ref|ZP_07318851.1| putative glutamine ABC transporter, permease protein GlnP [Veillonella atypica ACS-049-V-Sch6] gi|302513254|gb|EFL55293.1| putative glutamine ABC transporter, permease protein GlnP [Veillonella atypica ACS-049-V-Sch6] gi|302515428|gb|EFL57394.1| putative glutamine ABC transporter, permease protein GlnP [Veillonella atypica ACS-134-V-Col7a] Length = 216 Score = 137 bits (346), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 77/201 (38%), Positives = 124/201 (61%), Gaps = 4/201 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W N+I + P LLY A++ T+ I ++ IIG +++ R+ + I+ LI YV Sbjct: 2 DW-NVITSNLPLLLYGALM-TIKITAVAVSFGFIIGLIVSLARMS-NFVIVRLIAKCYVD 58 Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTP+LVQ+F+I++ LP I G D ++A + ++N AY+SEI R+ I S+ KGQ Sbjct: 59 VIRGTPMLVQIFMIYFALPQIIGTRIDPYIAACAACSINSGAYVSEIFRAGIQSVNKGQM 118 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A ++GL+ QT+R II+PQ S PL +EFI++LK +S+ S I E+ + Q I+ Sbjct: 119 EAGRSLGLSWWQTMRFIIIPQAFKASIPPLGNEFIAMLKDSSLVSVIGFEELMRRGQLII 178 Query: 183 STTYQPLIIYCELAFVYLILT 203 + TY I+ +A +YL +T Sbjct: 179 AKTYAATEIWGTVAIIYLCMT 199 >gi|303256934|ref|ZP_07342948.1| glutamine ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|330998815|ref|ZP_08322542.1| glutamine ABC transporter, permease protein GlnP [Parasutterella excrementihominis YIT 11859] gi|302860425|gb|EFL83502.1| glutamine ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|329576029|gb|EGG57548.1| glutamine ABC transporter, permease protein GlnP [Parasutterella excrementihominis YIT 11859] Length = 223 Score = 137 bits (346), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 79/199 (39%), Positives = 122/199 (61%), Gaps = 3/199 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++I ++ P LL A +TL I +S + L+IG F+ V ++ + +I + YV Sbjct: 7 LSIITENLPLLLKGA-GITLEITALSVGLGLLIGMFVGVAKLS-DNRLIRGLASVYVDCI 64 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQ+F++++ LP I G D FVA + + ++N AY++EI R+ I SI KGQ +A Sbjct: 65 RGTPLLVQIFLVYFALPQIIGHRIDPFVAAVGACSINSGAYVAEIFRAGIQSIDKGQMEA 124 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 S A+GL Q +R +I+PQ PL +EFI++LK +S+ S I E+ +T Q I+S Sbjct: 125 SRALGLNWFQAMRFVIMPQAFKRIIPPLGNEFIAMLKDSSLVSVIGFEELTRTGQLIISR 184 Query: 185 TYQPLIIYCELAFVYLILT 203 TY I+ +A +YLI+T Sbjct: 185 TYAAFEIWIVVALLYLIMT 203 >gi|241889480|ref|ZP_04776779.1| arginine transport system permease protein ArtQ [Gemella haemolysans ATCC 10379] gi|241863787|gb|EER68170.1| arginine transport system permease protein ArtQ [Gemella haemolysans ATCC 10379] Length = 213 Score = 137 bits (346), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 127/200 (63%), Gaps = 1/200 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A V TL ++ I+ ++ LI+G + + +I + ++++I YV I R TP+LVQ+ +I++ Sbjct: 15 ATVTTLKVSLIALLVGLILGIVVCLAKIS-TFKVLNVIAAIYVEIIRNTPILVQIMIIYF 73 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 LP IGI F F++ II+L++N AY+SEI RS I++I KGQ +A ++GL+ QT++ I Sbjct: 74 ALPEIGISFTPFMSAIIALSINSGAYVSEIFRSGILAIDKGQMEAGRSLGLSYFQTMKLI 133 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + S L +EFIS++K +S+ + + +I TA + + TYQ Y A +Y Sbjct: 134 ILPQALKNSLPALGNEFISLVKESSIVYFVGVADIMFTANTVKNATYQTFGPYLVAAAIY 193 Query: 200 LILTSFCYIIQIKIESSVTQ 219 I+TS ++ ++E +T+ Sbjct: 194 FIITSILSLLVKRLEKKLTK 213 >gi|313894837|ref|ZP_07828397.1| glutamine ABC transporter, permease protein GlnP [Selenomonas sp. oral taxon 137 str. F0430] gi|312976518|gb|EFR41973.1| glutamine ABC transporter, permease protein GlnP [Selenomonas sp. oral taxon 137 str. F0430] Length = 219 Score = 137 bits (346), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 80/199 (40%), Positives = 121/199 (60%), Gaps = 3/199 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 NLI++SFP LL A VT+ I +S I I+G +AV RI + ++ YV F Sbjct: 5 MNLIVNSFPLLLVGA-GVTIQITVLSTTIGFIVGLIVAVARISKLKPL-RMLAEVYVEFF 62 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQ+F+ ++ LP I G D F+A I + +N AY++EI R+ I S+ GQ +A Sbjct: 63 RGTPLLVQIFLFYFALPVITGQRIDPFIAAISACGINSGAYVAEIFRAGIQSVDAGQMEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++G+T QT+R+II+PQ PL +EFI++LK +S+ S I E+ + Q I++ Sbjct: 123 GRSLGMTWIQTMRYIIVPQAFKRVIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQLIIAK 182 Query: 185 TYQPLIIYCELAFVYLILT 203 TY + I+ +A +YL +T Sbjct: 183 TYGSMEIWLSVAVIYLAMT 201 >gi|153010172|ref|YP_001371386.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151562060|gb|ABS15557.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 215 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 70/172 (40%), Positives = 109/172 (63%), Gaps = 3/172 (1%) Query: 34 ISLIIGFFIAVIRI---FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 ++LI+GF +A I + I+ + YV +FRGTP LVQLF++++G P IGI + Sbjct: 26 LALILGFAVAAILVAGRLSRSPILRGLAAAYVSVFRGTPCLVQLFILYFGGPQIGINLEP 85 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 F A +I L LN AY+SE IR +I S+ +GQ +A+ +IG R QT+R ++LPQ Sbjct: 86 FAAGVIGLGLNIGAYMSESIRGAIQSVDRGQSEAARSIGFGRGQTMRFVVLPQAARLMIR 145 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 PL I++LK +++ STI++ E+ TAQR + +TY+P I+ A +Y+I+ Sbjct: 146 PLGVNAIALLKGSALVSTISVVELTYTAQRFIGSTYKPFEIFGVAAVLYMII 197 >gi|304437141|ref|ZP_07397102.1| ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369803|gb|EFM23467.1| ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 223 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 78/198 (39%), Positives = 121/198 (61%), Gaps = 3/198 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 NL+++SFP LL A VT+ I +S I +IG + V RI + ++ YV FR Sbjct: 10 NLVVNSFPLLLVGA-GVTIQITVLSTAIGFVIGLVVGVARISHLRPL-RMLAEVYVEFFR 67 Query: 67 GTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 GTPLLVQ+F+ ++ LP I G D F+A I + +N AY++EI R+ I S+ +GQ +A Sbjct: 68 GTPLLVQIFLFYFALPVITGQRIDPFIAAISACGINSGAYVAEIFRAGIQSVDEGQMEAG 127 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+T QT+R+II+PQ PL +EFI++LK +S+ S I E+ + Q I++ T Sbjct: 128 RSLGMTWLQTMRYIIVPQAFKRVIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQLIIAKT 187 Query: 186 YQPLIIYCELAFVYLILT 203 Y I+ +A +YL++T Sbjct: 188 YGSFEIWMSVAVIYLVMT 205 >gi|238927195|ref|ZP_04658955.1| polar amino acid ABC superfamily ATP binding cassette transporter, inner membrane subunit [Selenomonas flueggei ATCC 43531] gi|238884977|gb|EEQ48615.1| polar amino acid ABC superfamily ATP binding cassette transporter, inner membrane subunit [Selenomonas flueggei ATCC 43531] Length = 223 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 78/198 (39%), Positives = 121/198 (61%), Gaps = 3/198 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 NL+++SFP LL A VT+ I +S I +IG + V RI + ++ YV FR Sbjct: 10 NLVVNSFPLLLVGA-GVTIQITVLSTAIGFVIGLIVGVARISHLRPL-RMLAEVYVEFFR 67 Query: 67 GTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 GTPLLVQ+F+ ++ LP I G D F+A I + +N AY++EI R+ I S+ +GQ +A Sbjct: 68 GTPLLVQIFLFYFALPVITGQRIDPFIAAISACGINSGAYVAEIFRAGIQSVDEGQMEAG 127 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+T QT+R+II+PQ PL +EFI++LK +S+ S I E+ + Q I++ T Sbjct: 128 RSLGMTWLQTMRYIIVPQAFKRVIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQLIIAKT 187 Query: 186 YQPLIIYCELAFVYLILT 203 Y I+ +A +YL++T Sbjct: 188 YGSFEIWMSVAVIYLVMT 205 >gi|89258356|gb|ABD65399.1| putative amino acid ABC transporter permease protein [Ochrobactrum anthropi] Length = 254 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 76/197 (38%), Positives = 120/197 (60%), Gaps = 2/197 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F L+ P L AA V T+ I+ ++ ++ L + + R+ S I+ + YV +F Sbjct: 3 FALMQRVLPFFLEAAWV-TVQISALALILGLAVAAILVAGRLSRS-PILRGLAAAYVSVF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTP LVQLF++++G P IGI + F A +I L LN AY+SE IR +I S+ +GQ +A+ Sbjct: 61 RGTPCLVQLFILYFGGPQIGINLEPFAAGVIGLGLNIGAYMSESIRGAIQSVDRGQSEAA 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IG R QT+R ++LPQ PL I++LK +++ STI++ E+ TAQR + +T Sbjct: 121 RSIGFGRGQTMRFVVLPQAARLMIRPLGVNAIALLKGSALVSTISVVELTYTAQRFIGST 180 Query: 186 YQPLIIYCELAFVYLIL 202 Y+P I+ A +Y+I+ Sbjct: 181 YKPFEIFGVAAVLYMII 197 >gi|297619594|ref|YP_003707699.1| polar amino acid ABC transporter inner membrane subunit [Methanococcus voltae A3] gi|297378571|gb|ADI36726.1| polar amino acid ABC transporter, inner membrane subunit [Methanococcus voltae A3] Length = 232 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 74/197 (37%), Positives = 119/197 (60%), Gaps = 2/197 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 NL I P+L A++ TL I S ++ +++G F+ V RI S+ I Y+ + R Sbjct: 18 NLFISIVPRLFEGALM-TLKITVFSIILGIVLGVFVGVGRIS-SNFIYRSFSSVYIELIR 75 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTP+LVQ+ +I++GLP +GI D+F+A +++L LN AYI EII++ I+S+ GQ +A+ Sbjct: 76 GTPMLVQIMIIYFGLPDLGINLDAFLAGVLALGLNSGAYIGEIIKAGILSVHHGQMEAAR 135 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+ Q +RHIILPQ L +EFI +LK +S+ S I I E+ + ++ +TY Sbjct: 136 SLGMNYFQAMRHIILPQAFRNVLPALGNEFIILLKDSSLLSVIAIVELLRVGDQVRGSTY 195 Query: 187 QPLIIYCELAFVYLILT 203 +A YL++T Sbjct: 196 NAWTPLLGVALFYLLMT 212 >gi|330952973|gb|EGH53233.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 226 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 76/193 (39%), Positives = 121/193 (62%), Gaps = 1/193 (0%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F +L + T+ + +F+++ ++GFF+A++R+ T+ I Y+ IFR P+L Sbjct: 17 FLNVLGVGALTTVGLTLAAFIVAALLGFFLALMRLSRHRTL-GFIASCYLEIFRNIPILT 75 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF++++GL +IGI + A II LN +A +SE+ RSSI +I KGQ +A+Y+IG+TR Sbjct: 76 QLFILYFGLTYIGITLPAVGAAIIGFGLNGAAILSEVFRSSIKTIDKGQAEAAYSIGMTR 135 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +R I+LPQ S +++ I +LK TS+AS +PE+ A+ +VS TYQ +IY Sbjct: 136 SMAMRIIVLPQAFKISIPGMANFAIGLLKDTSLASAAAVPEMTFKAKMLVSETYQTNLIY 195 Query: 193 CELAFVYLILTSF 205 LA +YL L+ F Sbjct: 196 FLLAIIYLALSLF 208 >gi|206900671|ref|YP_002250772.1| glutamine ABC transporter, permease protein [Dictyoglomus thermophilum H-6-12] gi|206739774|gb|ACI18832.1| glutamine ABC transporter, permease protein [Dictyoglomus thermophilum H-6-12] Length = 218 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 78/200 (39%), Positives = 122/200 (61%), Gaps = 4/200 (2%) Query: 6 FNL--IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 FNL I+S P LL A VVTL ++ +S +I+G F+ + RI + + + YV Sbjct: 3 FNLSIFIESIPYLLKGA-VVTLRLSVVSVFFGIILGLFLGLARIS-KNYFLRIPSTIYVE 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLL+QL +I+Y LP GI + A I+ L+LN +AY EI RS I SI KGQ + Sbjct: 61 VIRGTPLLMQLLIIYYALPSFGINLGAITAAIVGLSLNSAAYTGEIFRSGIQSIEKGQME 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++G+T Q +R++ILPQ PL++EF+S+LK +S+AST+ + E+ + + IV+ Sbjct: 121 AARSLGMTYFQAMRYVILPQAFRRILPPLTNEFVSMLKESSLASTLAVTELLRAGREIVA 180 Query: 184 TTYQPLIIYCELAFVYLILT 203 + + +YL++T Sbjct: 181 WKANVFSPFLGVTLIYLLMT 200 >gi|229822721|ref|ZP_04448791.1| hypothetical protein GCWU000282_00009 [Catonella morbi ATCC 51271] gi|229787534|gb|EEP23648.1| hypothetical protein GCWU000282_00009 [Catonella morbi ATCC 51271] Length = 229 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 62/154 (40%), Positives = 109/154 (70%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ FRG PLLV LF I+YGLP +GIV +F A I+ L++ SAY +EIIR+ I + KG Sbjct: 69 YISFFRGVPLLVTLFFIYYGLPLMGIVMSAFTAAILGLSITASAYTAEIIRAGIEGVEKG 128 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A++A+GL+ +Q++R++++PQ + PLS+ + ++KS+S+A+ I++PEIFQ A+ Sbjct: 129 QWEAAFAVGLSYRQSLRYVVIPQATRLAIPPLSNVMLDLVKSSSIAAIISVPEIFQKAKV 188 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + ++ + + +Y +A +Y ++ + ++Q K+E Sbjct: 189 VGASEHDFMTMYILVAVIYWLICTAYSLLQAKLE 222 >gi|75910090|ref|YP_324386.1| amino acid ABC transporter permease [Anabaena variabilis ATCC 29413] gi|75703815|gb|ABA23491.1| L-arginine ABC transporter membrane protein / L-glutamine ABC transporter membrane protein / L-arginine-binding protein / L-histidine-binding protein / L-histidine ABC transporter membrane protein / L-lysine-binding protein / L-lysine ABC transporter membrane protein / L-glutamine-binding protein [Anabaena variabilis ATCC 29413] Length = 501 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 86/213 (40%), Positives = 129/213 (60%), Gaps = 8/213 (3%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 LI+ P LL A+V T+ + +S ++ LI G IA+IR+ T L+ YV FRG Sbjct: 275 LILQFLPTLLQGALV-TIQLTILSTLLGLICGTLIALIRLS-QFTPARLLARAYVDFFRG 332 Query: 68 TPLLVQLFVIFYGLP----HIGIVF--DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 TPLLVQ+F+I++G+P +G F D +VA +I+L++N +AYI+EI+R+ I SI GQ Sbjct: 333 TPLLVQIFMIYFGIPALAQQLGFTFNFDRWVAGVIALSVNAAAYIAEIVRAGIQSIEIGQ 392 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++GL T+R +I PQ PL +EFIS+LK TS+ + I E+F+ Q I Sbjct: 393 TEAAKSLGLNPWLTMRLVIFPQAFRRMLPPLGNEFISLLKDTSLVAVIGFEELFRKGQLI 452 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 V+ Y+ IY +A VYL LT + ++E Sbjct: 453 VADNYRAFEIYAAVAIVYLCLTLLASQVLSRLE 485 >gi|239833357|ref|ZP_04681685.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239821420|gb|EEQ92989.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 215 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 74/197 (37%), Positives = 121/197 (61%), Gaps = 2/197 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F L+ P L AA V T+ I+ ++ ++ L++ + R+ S I+ + YV +F Sbjct: 3 FALMQRVLPFFLEAAWV-TVQISALALILGLVVAAILVAGRLSRSP-ILRGLAAAYVSVF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTP LVQLF++++G P +GI + F A +I L LN AY+SE IR +I S+ +GQ +A+ Sbjct: 61 RGTPCLVQLFILYFGGPQVGINLEPFAAGVIGLGLNIGAYMSESIRGAIQSVDRGQTEAA 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G R QT+R ++LPQ PL I++LK +++ STI++ E+ TAQR + +T Sbjct: 121 RSVGFGRGQTMRLVVLPQAARLMIRPLGVNAIALLKGSALVSTISVVELTYTAQRFIGST 180 Query: 186 YQPLIIYCELAFVYLIL 202 Y+P I+ A +Y+I+ Sbjct: 181 YKPFEIFGVAAILYMII 197 >gi|228940614|ref|ZP_04103180.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228973534|ref|ZP_04134118.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980092|ref|ZP_04140408.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis Bt407] gi|228779678|gb|EEM27929.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis Bt407] gi|228786229|gb|EEM34224.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228819120|gb|EEM65179.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326941247|gb|AEA17143.1| cystine transport system permease [Bacillus thuringiensis serovar chinensis CT-43] Length = 222 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 127/211 (60%), Gaps = 5/211 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 ++SFPQL + + +TL I +S +IS +IG +A+I + + S I Y+ FRGTP Sbjct: 9 LESFPQL-FKYVYITLGITVVSMIISFVIGIGLAIITKNKTKYLYS-IARVYISFFRGTP 66 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAI---IISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 LLVQLFV+++GLP I F A+ +I L+LN +AY+SEIIR S+ ++ GQ DA Sbjct: 67 LLVQLFVLYFGLPQIFPTFTVLTAMQATLIGLSLNNAAYLSEIIRGSLNAVESGQMDACL 126 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+T+ Q +R II PQ I + L + F+ +LK +S++ + + EI A+ + + +Y Sbjct: 127 SVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFALGVAEILAQAKMLAAQSY 186 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + Y +A VY I+T Q K+E + Sbjct: 187 RYMESYLAVAIVYWIITIVISWGQKKLEKKL 217 >gi|166365426|ref|YP_001657699.1| amino-acid ABC-transporter permease protein [Microcystis aeruginosa NIES-843] gi|166087799|dbj|BAG02507.1| amino-acid ABC-transporter permease protein [Microcystis aeruginosa NIES-843] Length = 503 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 78/218 (35%), Positives = 127/218 (58%), Gaps = 11/218 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W L F L++ + T+ + +SF+ LI G +A I + + +I YV Sbjct: 276 FNWGEL----FYNLIFKGVPWTILLTVLSFLFGLIGGTLVA-IALISPYKWLKIICRIYV 330 Query: 63 WIFRGTPLLVQLFVIFYGLPHI------GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 FRGTP+LVQLF+I++GLP + I D A + +L+LN +AY++EI+R I S Sbjct: 331 DFFRGTPMLVQLFLIYFGLPGLFREIGLNIDLDRLPAALFALSLNVAAYLAEIMRGGIQS 390 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I GQW+A ++G++ QT+ +I Q PL +EFI+++K TS+A+ I E+F+ Sbjct: 391 IDNGQWEACSSLGMSPVQTMHEVIFSQAFRRMLPPLGNEFITLIKDTSLAAVIGFEELFR 450 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Q +V+TTY+ IY +A VYL+LT+ ++ ++E Sbjct: 451 QGQLMVATTYKAFEIYIAVAVVYLVLTTLSSVVFKRLE 488 >gi|42782597|ref|NP_979844.1| amino acid ABC transproter permease protein [Bacillus cereus ATCC 10987] gi|206975541|ref|ZP_03236454.1| amino acid ABC transproter permease protein [Bacillus cereus H3081.97] gi|217960925|ref|YP_002339493.1| amino acid ABC transproter permease protein [Bacillus cereus AH187] gi|222096983|ref|YP_002531040.1| amino acid abc transproter, permease protein [Bacillus cereus Q1] gi|229140135|ref|ZP_04268694.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST26] gi|42738523|gb|AAS42452.1| amino acid ABC transproter, permease protein VC0009 [Bacillus cereus ATCC 10987] gi|206746443|gb|EDZ57837.1| amino acid ABC transproter permease protein [Bacillus cereus H3081.97] gi|217064180|gb|ACJ78430.1| amino acid ABC transproter permease protein [Bacillus cereus AH187] gi|221241041|gb|ACM13751.1| amino acid ABC transproter, permease protein [Bacillus cereus Q1] gi|228643347|gb|EEK99619.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST26] Length = 222 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 127/211 (60%), Gaps = 5/211 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 ++SFPQL + + +TL I +S +IS +IG +A+I + + S I Y+ FRGTP Sbjct: 9 LESFPQL-FKYVYITLGITVVSMIISFVIGIGLAIITKNKTKFLYS-IARVYISFFRGTP 66 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAI---IISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 LLVQLFV+++GLP I F A+ +I L+LN +AY+SEIIR S+ ++ GQ DA Sbjct: 67 LLVQLFVLYFGLPQIFPTFTVLTAMQATLIGLSLNNAAYLSEIIRGSLNAVESGQMDACL 126 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+T+ Q +R II PQ I + L + F+ +LK +S++ + + EI A+ + + +Y Sbjct: 127 SVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFALGVAEILAQAKMLAAQSY 186 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + Y +A VY I+T Q K+E + Sbjct: 187 RYMESYLAVAIVYWIITIVISWGQKKLEKKL 217 >gi|303253452|ref|ZP_07339594.1| ABC-type amino acid transport system, permease component [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302647696|gb|EFL77910.1| ABC-type amino acid transport system, permease component [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 153 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 65/149 (43%), Positives = 94/149 (63%) Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 +VQ+ V+FYGLP IG+ D A II +LN AY SE +R++I S+PKGQW+A Y IG+ Sbjct: 1 MVQISVVFYGLPAIGVYIDPIPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGM 60 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T QT R II PQ I + PLS+ FI + K TS+AS +T+ E+F+ AQ++ + +Y L Sbjct: 61 TYMQTFRRIIAPQAIRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLP 120 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQ 219 +Y E +Y ++IQ K+E + Sbjct: 121 VYIEAGLIYWCFCWGLFLIQAKLERRFNR 149 >gi|16077406|ref|NP_388219.1| ABC transporter permease [Bacillus subtilis subsp. subtilis str. 168] gi|221308149|ref|ZP_03589996.1| hypothetical protein Bsubs1_01883 [Bacillus subtilis subsp. subtilis str. 168] gi|221312474|ref|ZP_03594279.1| hypothetical protein BsubsN3_01891 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317407|ref|ZP_03598701.1| hypothetical protein BsubsJ_01878 [Bacillus subtilis subsp. subtilis str. JH642] gi|221321670|ref|ZP_03602964.1| hypothetical protein BsubsS_01909 [Bacillus subtilis subsp. subtilis str. SMY] gi|321314008|ref|YP_004206295.1| putative ABC transporter permease [Bacillus subtilis BSn5] gi|1175692|sp|P42399|YCKA_BACSU RecName: Full=Probable amino-acid ABC transporter permease protein yckA gi|710628|dbj|BAA06425.1| homologue of glutamine permease of H. influenzae [Bacillus subtilis] gi|1805409|dbj|BAA08971.1| yckA [Bacillus subtilis] gi|2632623|emb|CAB12131.1| putative ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] gi|320020282|gb|ADV95268.1| putative ABC transporter (permease) [Bacillus subtilis BSn5] Length = 226 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 76/214 (35%), Positives = 129/214 (60%), Gaps = 2/214 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L I+SFP ++ I TL I+ +S +IG FI++ R+ ++ Y+ R Sbjct: 14 KLAIESFPYVI-KGIGYTLLISFVSMFAGTVIGLFISLARMS-KLALLRWPAKLYISFMR 71 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G P+LV LF++++G P+IGI F + A +I +LN +AYI+EI RS+I S+ KGQW+A+ Sbjct: 72 GVPILVILFILYFGFPYIGIEFSAVTAALIGFSLNSAAYIAEINRSAISSVEKGQWEAAS 131 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ QT+R IILPQ+I + PL++ + ++K++S+A+ IT+PE+ Q A+ I + Sbjct: 132 SLGLSYWQTMRGIILPQSIRIALPPLANVLLDLIKASSLAAMITVPELLQHAKIIGGREF 191 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + +Y A +Y + S + Q +E + Sbjct: 192 DYMTMYILTALIYWAICSIAAVFQNILEKKYAHY 225 >gi|330952972|gb|EGH53232.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas syringae Cit 7] Length = 215 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 72/188 (38%), Positives = 113/188 (60%), Gaps = 4/188 (2%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 +A + VI L++G +A+ R S + Y+ +FRGTP LVQLF+I++ L +GI Sbjct: 24 MAIGALVIGLVVGLVLALAR-RSSSAPLRRAASIYIEVFRGTPALVQLFIIYFSLTAVGI 82 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 F SF+A II L LN +AY++EI R+ + ++PKGQ +A+ AIG+ R Q +R ++LPQ I Sbjct: 83 EFSSFIAAIIGLGLNAAAYLAEIYRAGLEAVPKGQVEAAKAIGMPRGQVMRWVVLPQAIR 142 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFC 206 P+ + IS+LK TSVAS I P++ AQ + + + PL Y + +Y L C Sbjct: 143 IVLAPIGNVAISLLKDTSVASLIAAPDLMLRAQDLSAVYFMPLETYIRVGAMYFAL---C 199 Query: 207 YIIQIKIE 214 + + + + Sbjct: 200 FPLSLGVR 207 >gi|163856808|ref|YP_001631106.1| polar amino acid transport system permease protein [Bordetella petrii DSM 12804] gi|163260536|emb|CAP42838.1| polar amino acid transport system permease protein [Bordetella petrii] Length = 222 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 68/194 (35%), Positives = 116/194 (59%), Gaps = 1/194 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ + F LL A V AC + ++ +IG + V R+ + + Y+ F Sbjct: 5 FSPVFADFDALLRGAAVTVEVTAC-ALLLGCVIGLLVGVGRLNPQRRGLYGLCSLYLLCF 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+ F+GLP GI+ +F ++ L + AY+SEI+R +I S+ +GQ +A+ Sbjct: 64 RGTPLLVQLFIWFFGLPQFGIMLPAFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQTEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G++ Q +R IILPQ + PL +EFI+++K++++ S +TI ++ Q+I+S + Sbjct: 124 RSLGMSSGQAMRIIILPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVS 183 Query: 186 YQPLIIYCELAFVY 199 Y+ L Y +A +Y Sbjct: 184 YRSLETYLVIALIY 197 >gi|163789714|ref|ZP_02184151.1| predicted transporter subunit: membrane component of ABC superfamily [Carnobacterium sp. AT7] gi|328956822|ref|YP_004374208.1| cystine ABC transporter [Carnobacterium sp. 17-4] gi|159874936|gb|EDP69003.1| predicted transporter subunit: membrane component of ABC superfamily [Carnobacterium sp. AT7] gi|328673146|gb|AEB29192.1| cystine ABC transporter [Carnobacterium sp. 17-4] Length = 214 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 79/213 (37%), Positives = 126/213 (59%), Gaps = 2/213 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++I + P LL A TL I +S +IG +A+ R+ + I + YV I Sbjct: 1 MEVLIQNIPFLLQGA-YYTLLITLVSMFFGSLIGIIVAIARLK-GNKAIQAVARGYVSII 58 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTP LVQ+ +I+YGL GI D A I+L++N AY+SE IR ++ SIPKGQ +A+ Sbjct: 59 RGTPTLVQIIIIYYGLVDFGISLDPLPAAFIALSVNNGAYLSESIRGALQSIPKGQMEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 YA G+T Q +R IILPQ I + P+ + FI +LK TS+ S I++ E+ ++AQ +++ Sbjct: 119 YATGMTPWQAMRRIILPQAIRIAIPPVGNTFIGMLKETSLVSVISVTELLRSAQLLIAQY 178 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Y + Y +A +Y I+++ + K+E+ ++ Sbjct: 179 YSYMPFYLGIAVIYWIMSTVFSFLLNKLEARMS 211 >gi|90581126|ref|ZP_01236925.1| Putative amino acid ABC transporter, permease protein [Vibrio angustum S14] gi|90437647|gb|EAS62839.1| Putative amino acid ABC transporter, permease protein [Vibrio angustum S14] Length = 223 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 78/218 (35%), Positives = 135/218 (61%), Gaps = 9/218 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN ++ P LL + TL +A I + +L++G +A++RI+ +++ + Y+ F Sbjct: 5 FNYMLSLMPILL-KYLPTTLLMATIGAIFALVVGLILALVRIY-QLPLLNTLTQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP I + D+F A +I L+L+F+AY++E IR++I + + Q Sbjct: 63 RGTPLLVQLFLLYYGLPQIIPSLVGLDAFSAAVIGLSLHFAAYMAESIRAAITGVDRSQR 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS AIG+T QT+R IILPQ + L + FI ++KSTS+A T+ +PEI AQ Sbjct: 123 EASLAIGMTEWQTMRRIILPQATRIALPSLMNYFIDMIKSTSLAFTLGVPEIMAKAQMEA 182 Query: 183 STTYQPLIIYCELAFVY----LILTSFCYIIQIKIESS 216 S++++ + +A +Y ++LT + + +++ + Sbjct: 183 SSSFKFFEAFLAVAMIYWAVVVVLTRLQQLAETRLDRA 220 >gi|312879705|ref|ZP_07739505.1| amino acid ABC transporter membrane protein, PAAT family ;amino acid ABC transporter substrate-binding protein, PAAT family [Aminomonas paucivorans DSM 12260] gi|310782996|gb|EFQ23394.1| amino acid ABC transporter membrane protein, PAAT family ;amino acid ABC transporter substrate-binding protein, PAAT family [Aminomonas paucivorans DSM 12260] Length = 512 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 119/183 (65%), Gaps = 1/183 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A VVTL ++ + ++++ +GF +AVIR+F +L + Y+ RGTP+L+QLF IFY Sbjct: 296 AAVVTLKVSVTAMLLAMALGFLLAVIRVFGPKWASALAVA-YIEAIRGTPVLIQLFFIFY 354 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP++GI F+A + L LN++AY +E R+ ++++P+GQ +A+ + +TR Q +RH+ Sbjct: 355 GLPNVGIKLSPFLAGALGLGLNYAAYEAENYRAGLLAVPRGQMEAALGLSMTRWQALRHV 414 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ++PQ P++++FIS+LK +S+ S IT+ ++ + +I +T Y +A +Y Sbjct: 415 VIPQAFRVVIPPVTNDFISLLKDSSLVSIITMVDLTKAYGQIAATYYDYFGTGIMVAAIY 474 Query: 200 LIL 202 L+L Sbjct: 475 LLL 477 >gi|320333845|ref|YP_004170556.1| polar amino acid ABC transporter inner membrane subunit [Deinococcus maricopensis DSM 21211] gi|319755134|gb|ADV66891.1| polar amino acid ABC transporter, inner membrane subunit [Deinococcus maricopensis DSM 21211] Length = 219 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 127/206 (61%), Gaps = 2/206 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +ID+ P LL A + L A + ++ L + F +A+ R + ++ YV RGT Sbjct: 7 MIDALPVLLTGARITVL-YAVGAMLLGLPLAFLVALGRSAPWPPV-RWLLDLYVSFIRGT 64 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLLVQ+FV++YGLP +G+ D + + +L+LN +AY+S IR+S+ ++ +GQ +A+ ++ Sbjct: 65 PLLVQIFVLYYGLPGLGVTLDPVTSGVAALSLNVAAYMSVTIRASLDAVGRGQREAARSL 124 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+ QT+R ++LPQ + L + I ++K TS+ S IT+ E+ ++AQ +++ T++P Sbjct: 125 GLSSSQTMRFVVLPQALRIGLPSLMNSLIGLIKDTSLVSVITVTELLRSAQLVIARTFEP 184 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIE 214 Y A +Y +++S ++Q ++E Sbjct: 185 FGPYLAAALIYWLISSLLGLVQSRLE 210 >gi|313902717|ref|ZP_07836115.1| amino acid ABC transporter membrane protein, PAAT family [Thermaerobacter subterraneus DSM 13965] gi|313467014|gb|EFR62530.1| amino acid ABC transporter membrane protein, PAAT family [Thermaerobacter subterraneus DSM 13965] Length = 225 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 124/202 (61%), Gaps = 1/202 (0%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A +TL + +S V+ L IG +A++++ ++ I Y WI RGTPLLVQ+++I+ Sbjct: 24 AGAWLTLKLTVVSIVLGLAIGLLVALMKLS-RFGVLRTIGSAYTWIIRGTPLLVQIYLIY 82 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 +GL GIV ++F A + +L++N AY++EIIR+ I SIP+GQ +A+ ++G++ Q +R Sbjct: 83 FGLSDYGIVLEAFPAGVAALSINSGAYLAEIIRAGIESIPRGQMEAARSLGMSYGQAMRR 142 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 +ILPQ P+ +EF+ +LK +S+ S I + EI +++ S T + + + AF Sbjct: 143 VILPQAYRRMIPPMVNEFVILLKDSSLVSVIGLQEIMLNSRQFASATLKSVWFFGYAAFY 202 Query: 199 YLILTSFCYIIQIKIESSVTQH 220 YL++T+ + +E + ++ Sbjct: 203 YLVMTTLFTTLGSWLERKLKEY 224 >gi|148655935|ref|YP_001276140.1| polar amino acid ABC transporter inner membrane subunit [Roseiflexus sp. RS-1] gi|148568045|gb|ABQ90190.1| polar amino acid ABC transporter, inner membrane subunit [Roseiflexus sp. RS-1] Length = 224 Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 82/216 (37%), Positives = 126/216 (58%), Gaps = 6/216 (2%) Query: 6 FNLIIDSF----PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 N IID P LL VVTL IA +S + +IIG + V R++ + I+ Y Sbjct: 1 MNDIIDLLGKVTPDLLQGT-VVTLQIAAVSLTLGMIIGLPVGVGRVY-GPGWVQRILGAY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V +F+GTPLL+QLF+ +YGLP IGI A ++L LN +AY +E +RS++ S+ +GQ Sbjct: 59 VTLFQGTPLLIQLFMAYYGLPDIGITLGRLQAAFLTLGLNSAAYQAEYLRSALQSVSEGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 A+ A+G+++ Q I IILPQ + + S+E +++LK TSV I +P++ A+ + Sbjct: 119 MTAARALGMSKWQAIWSIILPQAVRLALPAWSNEAVAMLKYTSVVFLIAVPDLMGQAKIL 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 S + P+ IY +A Y++L Y+I IE V Sbjct: 179 SSRYFAPIQIYLIVAVFYIVLVGITYLILTWIERRV 214 >gi|229174192|ref|ZP_04301727.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus MM3] gi|228609313|gb|EEK66600.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus MM3] Length = 226 Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 79/214 (36%), Positives = 125/214 (58%), Gaps = 7/214 (3%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL---IMHFYVWIFR 66 ++SFPQL + + +TL I +S +IS +IG +A+I + I Y+ FR Sbjct: 9 LESFPQL-FKYVYITLGITVVSMIISFVIGIGLAIITKNKTKNKTKFLYSIARVYISFFR 67 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAI---IISLTLNFSAYISEIIRSSIISIPKGQWD 123 GTPLLVQLFV+++GLP I F A+ +I L+LN +AY+SEIIR S+ ++ GQ D Sbjct: 68 GTPLLVQLFVLYFGLPQIFPTFTVLTAMQATLIGLSLNNAAYLSEIIRGSLNAVESGQMD 127 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A ++G+T KQ +R II PQ I + L + F+ +LK +S++ + + EI A+ + + Sbjct: 128 ACLSVGMTNKQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFALGVAEILAQAKMLAA 187 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +Y+ + Y +A VY I+T Q K+E + Sbjct: 188 QSYRYMESYLAVAIVYWIITIVISWGQKKLEKKL 221 >gi|116254212|ref|YP_770050.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115258860|emb|CAK09968.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 230 Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 74/217 (34%), Positives = 121/217 (55%), Gaps = 1/217 (0%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W F + + T+ + +S + LI+GF +A++R S + I Y+ Sbjct: 4 WNWSGFFGYLFNPFILGGVFTTVWLTVVSLIAGLILGFALALMR-RSSRRVPYYIAKAYI 62 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 W+FRGTPLLVQL I+ LP GI F A ++ L LN +AY++EIIR+ I ++P+GQ Sbjct: 63 WLFRGTPLLVQLIAIYTALPLFGIKFTVIEAALLGLALNEAAYLAEIIRAGIEAVPEGQT 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A+ A+G+T +Q +R+I++PQ PL + +LK+TSV S I++ E+ + Q ++ Sbjct: 123 RAARALGMTERQIMRYIVMPQAFKVIVPPLGNSVNGLLKTTSVTSVISVEELLRRTQVLI 182 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + L ++ A YL+LT+ Q IE + Q Sbjct: 183 QERFMVLELFAVAAIYYLLLTTLWDFFQSHIEKRLGQ 219 >gi|47569972|ref|ZP_00240636.1| amino acid ABC transporter, permease protein VC0009 [Bacillus cereus G9241] gi|47553370|gb|EAL11757.1| amino acid ABC transporter, permease protein VC0009 [Bacillus cereus G9241] Length = 222 Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 126/211 (59%), Gaps = 5/211 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 ++SFPQL + + +TL I +S +IS +IG +A+I + + S I Y+ FRGTP Sbjct: 9 LESFPQL-FKYVYITLGITVVSMIISFVIGIGLAIITKNKTKFLYS-IARVYISFFRGTP 66 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAI---IISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 LLVQLFV+++GLP I F A+ +I L+LN +AY+SEIIR S ++ GQ DA Sbjct: 67 LLVQLFVLYFGLPQIFPTFTVLTAMQATLIGLSLNNAAYLSEIIRGSFNAVESGQMDACL 126 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+T+ Q +R II PQ I + L + F+ +LK +S++ + + EI A+ + + +Y Sbjct: 127 SVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFALGVAEILAQAKMLAAQSY 186 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + Y +A VY I+T Q K+E + Sbjct: 187 RYMESYLAVAIVYWIITIVISWGQKKLEKKL 217 >gi|311108218|ref|YP_003981071.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 18 [Achromobacter xylosoxidans A8] gi|310762907|gb|ADP18356.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 18 [Achromobacter xylosoxidans A8] Length = 230 Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 67/194 (34%), Positives = 118/194 (60%), Gaps = 2/194 (1%) Query: 29 CISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF 88 C +F +++ +G + + R+ S ++S FY+ + RGTPLL+QLF I+YGLP +G+V Sbjct: 26 CSAF-LAVALGLLVCLCRLSPSR-LLSRGARFYIDVIRGTPLLLQLFYIYYGLPEMGVVI 83 Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 + FVA ++ LTLNF AY++E+ RS I S+ GQ++A+ A+GL + Q +R I+LPQ + T Sbjct: 84 NGFVAGVLGLTLNFGAYLAELFRSGIQSVDSGQYEAARALGLGKVQRLRRIVLPQALRTV 143 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 L + + ++K TS+ + I++ E+ + + + T+Q L +Y + +Y + S Sbjct: 144 FPALGNYALVLIKETSLVAVISVYELMRAGEMLAGATFQALTVYTMVGVIYFAMCSVLAY 203 Query: 209 IQIKIESSVTQHTY 222 + + E +T Y Sbjct: 204 LFRRSEKRLTVPGY 217 >gi|206562321|ref|YP_002233084.1| putative amino acid ABC transporter permease [Burkholderia cenocepacia J2315] gi|198038361|emb|CAR54318.1| putative amino acid ABC transporter system permease [Burkholderia cenocepacia J2315] Length = 216 Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 132/215 (61%), Gaps = 2/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +L + S P LL +A+ +T+ + SF + +G +A+ R+ S + I YV IF Sbjct: 2 LDLFVRSLP-LLESAVTMTVFLGLASFALGSALGLAVALARVS-SIRFLRGIAFAYVSIF 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQ+ +I++GLP GI D A +++LTL +AY+SE RS I ++ +GQW+A+ Sbjct: 60 RGTPLLVQILLIYFGLPRYGITLDPVPAALLALTLFSAAYLSENFRSGINAVDRGQWEAA 119 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +++G+ + + +ILPQ + + P+ S I+++K TS+ASTIT+ E+ + A ++ ++T Sbjct: 120 HSLGMNYWKMMWRVILPQGLRIAIPPVGSRMIALIKDTSLASTITVVELTRVADQVGAST 179 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ + ++ + +Y ++ I+Q E V++ Sbjct: 180 FRYMEMFLMVGLIYWVINQILTIVQTIFEGRVSRR 214 >gi|260460787|ref|ZP_05809037.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259033364|gb|EEW34625.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 210 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 61/151 (40%), Positives = 99/151 (65%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 I+ + YV +FRGTP L+QLFV+++G P IGI D F A +I L LN AY++E IR Sbjct: 42 AILRALGAVYVSLFRGTPCLIQLFVLYFGGPQIGINLDPFAAGVIGLGLNIGAYMAESIR 101 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++I++ +GQ +A+ IG +R QT+R ++LPQ PL +++LK +++ STI++ Sbjct: 102 GAVIAVDRGQTEAARTIGFSRFQTLRKVVLPQAARLMIRPLGVNTVALLKGSALVSTISV 161 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 E+ TAQR + +TY+P I+ A +Y+++ Sbjct: 162 VELTYTAQRFIGSTYKPFEIFGVAALLYMVM 192 >gi|319941415|ref|ZP_08015743.1| hypothetical protein HMPREF9464_00962 [Sutterella wadsworthensis 3_1_45B] gi|319805035|gb|EFW01865.1| hypothetical protein HMPREF9464_00962 [Sutterella wadsworthensis 3_1_45B] Length = 221 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 81/204 (39%), Positives = 126/204 (61%), Gaps = 4/204 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++ F+LII S P LL A +TL I ++ + L+IG +A + ++ L Sbjct: 1 MEFD-FSLIIHSIPLLLRGA-GLTLEITALAVGLGLLIGL-VASLAQLSKSPLLRLPAKV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV RGTPLL+Q+F+I++ LP+I G D F+A + + +LN AYI+EI R I SI + Sbjct: 58 YVDCIRGTPLLIQIFIIYFALPNIIGHRIDPFIAAVTACSLNSGAYIAEIFRGGIQSISQ 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ+ A ++G+T QT+R+I+LPQ PL +EFI++LK +S+ S I E+ ++ Q Sbjct: 118 GQFRAGLSLGMTYGQTMRYIVLPQAFKRIIPPLGNEFIAMLKDSSLVSVIGFEELTRSGQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I++ TY L I+ +A +YL LT Sbjct: 178 LIIAETYGTLEIWTCVAIIYLTLT 201 >gi|163789546|ref|ZP_02183984.1| hypothetical protein CAT7_08890 [Carnobacterium sp. AT7] gi|159875078|gb|EDP69144.1| hypothetical protein CAT7_08890 [Carnobacterium sp. AT7] Length = 226 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 71/195 (36%), Positives = 121/195 (62%), Gaps = 1/195 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ S + ++GF +A++R+ + I+ +I Y+ RGTP LV LF++++G P Sbjct: 29 TLGISLASMIFGTVLGFLLAIMRMS-NSKILRIIARTYISFMRGTPTLVFLFILYFGFPF 87 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 IGI F++ A II +L+ +AY +EIIRSS+ S+ GQW+A+YA+GL +R +I+PQ Sbjct: 88 IGIQFEAVNAAIIGFSLSSAAYSAEIIRSSLHSVDHGQWEAAYALGLKWPFIMRKVIIPQ 147 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P+S+ + ++K TS+A+ IT+PEIFQ A+ + + + +Y +A +Y + Sbjct: 148 AMRIAVPPMSNVLLDLIKGTSLAAMITVPEIFQQAKIVGGREFDYMTMYILVALIYWAIC 207 Query: 204 SFCYIIQIKIESSVT 218 S I Q +E + Sbjct: 208 SVFTIFQNYLEKKTS 222 >gi|312898833|ref|ZP_07758221.1| putative glutamine ABC transporter permease protein [Megasphaera micronuciformis F0359] gi|310619995|gb|EFQ03567.1| putative glutamine ABC transporter permease protein [Megasphaera micronuciformis F0359] Length = 219 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 79/199 (39%), Positives = 122/199 (61%), Gaps = 3/199 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LI +S P LL A +T+ I IS I ++G I+V R+ ++ + YV + Sbjct: 3 FDLIWNSLPLLLLGA-AMTIKITAISVGIGFLLGLIISVCRLS-GIKLLKAVSVCYVNVI 60 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTP+LVQ+F+I++ LP + G D F+A +++ ++N AY+SEI R+ I S+ KGQ +A Sbjct: 61 RGTPMLVQIFLIYFALPQVLGTRIDPFLAAVLACSINSGAYVSEIFRAGIQSVDKGQMEA 120 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++GL+ QT+ +IILPQ PL +EFIS+ K T+ S I E+ + Q I+S Sbjct: 121 GRSLGLSWMQTMFYIILPQAFKHVIPPLGNEFISMTKETAQVSVIGFEELTRRGQLIISK 180 Query: 185 TYQPLIIYCELAFVYLILT 203 TY L I+ +A +YLI+T Sbjct: 181 TYGALEIWLAVAVLYLIMT 199 >gi|159186075|ref|NP_356420.2| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|159141209|gb|AAK89205.2| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 197 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 72/181 (39%), Positives = 112/181 (61%), Gaps = 1/181 (0%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI 94 L +GF IAV+R+ +S +FY WIFRGTPLLVQL +I+ GLP +GI + Sbjct: 4 GLALGFVIAVMRMS-KYRFLSGPAYFYTWIFRGTPLLVQLIIIYTGLPQMGIKLTVLQST 62 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 +I L+L +AY+SEI+R+ I ++PKGQ +A+ AIG+T Q +R+I+ PQ PL + Sbjct: 63 LIGLSLCEAAYLSEIVRAGIAAVPKGQINAARAIGMTEAQVMRYIVAPQAFRIIIPPLGN 122 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 +LK+TS+AS I++ E+ + Q ++ + L ++ A YL +T+ +IQ +IE Sbjct: 123 SVNGVLKTTSIASIISMEELLRRTQVLIQEKFLVLELFTVAALYYLAMTTAWELIQRRIE 182 Query: 215 S 215 Sbjct: 183 K 183 >gi|292669477|ref|ZP_06602903.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas noxia ATCC 43541] gi|292648930|gb|EFF66902.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas noxia ATCC 43541] Length = 223 Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 76/198 (38%), Positives = 120/198 (60%), Gaps = 3/198 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L+ +SFP LL A VT+ I +S I +IG + V RI ++ ++ YV FR Sbjct: 10 DLVFNSFPLLLVGA-GVTIQITVLSTAIGFVIGLIVGVARISHV-RLLRMLAEVYVEFFR 67 Query: 67 GTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 GTPLLVQ+F+ ++ LP + G D F+A I + +N AY++EI R+ I S+ GQ +A Sbjct: 68 GTPLLVQIFLFYFALPVLTGQRIDPFIAAISACGINSGAYVAEIFRAGIQSVDDGQMEAG 127 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+T QT+R+II+PQ PL +EFI++LK +S+ S I E+ + Q I++ T Sbjct: 128 RSLGMTWLQTMRYIIVPQAFKRVIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQLIIAKT 187 Query: 186 YQPLIIYCELAFVYLILT 203 Y I+ +A +YL++T Sbjct: 188 YGSFEIWMSVAVIYLVMT 205 >gi|253681835|ref|ZP_04862632.1| amino acid ABC transporter, permease component [Clostridium botulinum D str. 1873] gi|253561547|gb|EES90999.1| amino acid ABC transporter, permease component [Clostridium botulinum D str. 1873] Length = 215 Score = 134 bits (338), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 77/215 (35%), Positives = 130/215 (60%), Gaps = 4/215 (1%) Query: 7 NLIIDSFPQLLYAAIV-VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +++ + P LL +I+ + L I C+ ++ IIG ++ +++ ++ I FY W+F Sbjct: 4 DILKNMVPVLLKGSIITIQLTIICV--ILGSIIGVIVSGLKLSKYKWVL-YIASFYTWLF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTP+ +QLF +YGLP +GI A II L+LN AY+SEIIR IISI KGQ++A Sbjct: 61 RGTPMFLQLFFFYYGLPFLGISLSPMAAAIIGLSLNSGAYMSEIIRGGIISIDKGQFEAC 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G T QT+ +ILPQ + +EFI++LK TS+ S IT+ E+ + A+ +S + Sbjct: 121 KSLGFTNLQTMTKVILPQAFRIILPSVGNEFITMLKDTSLVSAITMEELMRNAELQMSAS 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +P+ + A +YL++T+ +I +E ++ + Sbjct: 181 GRPVEPFVIAAVLYLLMTTVFAVIFSSLEKKMSMY 215 >gi|328957173|ref|YP_004374559.1| putative amino acid ABC transporter, membrane-spanning subunit [Carnobacterium sp. 17-4] gi|328673497|gb|AEB29543.1| putative amino acid ABC transporter, membrane-spanning subunit [Carnobacterium sp. 17-4] Length = 211 Score = 134 bits (337), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 125/211 (59%), Gaps = 3/211 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +LI + P LL + TL + I + ++ +GF IA IR++ + IS I+ Y++I Sbjct: 1 MDLIAEITPNLL-DGLKTTLLLFLIIVIATIPLGFLIACIRVY-APKWISWIIQVYIYIM 58 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLL+QL V+F+GLP +GI FD F A + + +N++AY +EI R I+SIPKGQ++A Sbjct: 59 RGTPLLLQLMVVFFGLPLVGITFDRFSAAVFTFIINYAAYYAEIFRGGILSIPKGQFEAI 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +G+ + R II+PQ + + +E I+++K TS+ + I E+ + Q I + T Sbjct: 119 RVLGIGKINGFRKIIIPQVMRVVLPSVGNEVIALVKDTSLIYILGIGELLRAGQ-IAANT 177 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 Y LI Y + +YL++T ++ IE Sbjct: 178 YASLIPYAAVGAIYLVVTGLVTLLLNAIEKK 208 >gi|311070992|ref|YP_003975915.1| putative ABC transporter permease [Bacillus atrophaeus 1942] gi|310871509|gb|ADP34984.1| putative ABC transporter (permease) [Bacillus atrophaeus 1942] Length = 225 Score = 134 bits (337), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 129/214 (60%), Gaps = 2/214 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L I+SFP ++ I TL I+ +S ++G FI++ R+ ++ Y+ R Sbjct: 13 KLAIESFPYVI-KGIWYTLLISFVSMFAGTMLGLFISLARMS-KFALLRWPARLYISFMR 70 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G P+LV LF++++G P+IGI F + A ++ +LN +AYI+EI RS+I S+ KGQW+A+ Sbjct: 71 GVPILVILFILYFGFPYIGIEFSAVTAALLGFSLNSAAYIAEINRSAISSVDKGQWEAAA 130 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ +T+R +ILPQ++ + PL++ + ++K++S+A+ IT+PE+ Q A+ I + Sbjct: 131 SLGLSYWKTMRGVILPQSVRVALPPLANVLLDLIKASSLAAMITVPELLQHAKIIGGREF 190 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + +Y A +Y + SF Q +E + Sbjct: 191 DYMTMYILTALIYWAICSFAAAFQNILEKKYAHY 224 >gi|119945610|ref|YP_943290.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] gi|119864214|gb|ABM03691.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] Length = 223 Score = 134 bits (337), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 72/180 (40%), Positives = 116/180 (64%), Gaps = 4/180 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ +A + F ++I+ +AV+R+F ++ + ++ FRGTPLLVQLF+++YGLP Sbjct: 23 VTMEMALLGFCFAIILAVILAVVRVF-KIPLLHNLASVFISFFRGTPLLVQLFLLYYGLP 81 Query: 83 HIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + +F D+F A II LTL+FSAY++E IR++I+ + K Q +A +IG+TR Q +R I Sbjct: 82 QVMPIFAGVDAFSAAIIGLTLHFSAYMAESIRAAIMGVDKSQMEACLSIGMTRLQAMRRI 141 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L + FI ++KSTS+A T+ + EI AQ S++++ Y +A +Y Sbjct: 142 ILPQAARVATPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFKYFESYLAVALIY 201 >gi|298290195|ref|YP_003692134.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296926706|gb|ADH87515.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 222 Score = 134 bits (337), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 61/146 (41%), Positives = 102/146 (69%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 FY+W RGTP L+Q+F+I++GLP +G+ FVA +++L N AY++EI+R+ + +IP Sbjct: 60 EFYIWFIRGTPTLIQIFIIYFGLPQLGLRLSPFVAGVVALGFNGGAYVAEIVRAGLSAIP 119 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +++ A+G+ R Q + IILPQ P+++E I+++K+TS+ STIT+ E+ + Sbjct: 120 KGQTESAQALGMGRWQMMTRIILPQVFRVILPPVTNEAITMVKNTSLLSTITVVELTLYS 179 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTS 204 Q I++TT++P Y A +YL++TS Sbjct: 180 QTIIATTFRPFEFYIATALIYLVMTS 205 >gi|23098332|ref|NP_691798.1| amino acid ABC transporter permease [Oceanobacillus iheyensis HTE831] gi|22776558|dbj|BAC12833.1| amino acid ABC transporter permease [Oceanobacillus iheyensis HTE831] Length = 230 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 73/193 (37%), Positives = 118/193 (61%), Gaps = 3/193 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTII-SLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 T+ IA I LI G F+A+ R S TI+ Y+ RGTP+LV LF+I++GLP Sbjct: 32 TIMIAVAGMAIGLIFGLFLALARD--SKTILLRWPSRIYISFMRGTPMLVFLFIIYFGLP 89 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 ++GI + A I+ LN +AYI+EI RSS+ S+ +GQW+++ A+ +T T+R IILP Sbjct: 90 YMGIELSAISAAILGFGLNSAAYIAEINRSSLNSVDRGQWESAKALNMTYWHTLRKIILP 149 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + PL++ F+ I+K+TS+ + IT+PE+FQ AQ + + + +Y +A +Y + Sbjct: 150 QATRIAIPPLTNVFMDIVKATSLTAVITVPELFQKAQIVTGREFDAMTVYILVALIYWPI 209 Query: 203 TSFCYIIQIKIES 215 ++Q ++E Sbjct: 210 CILIGMLQERLEK 222 >gi|237737432|ref|ZP_04567913.1| amino acid ABC transporter, permease [Fusobacterium mortiferum ATCC 9817] gi|229421294|gb|EEO36341.1| amino acid ABC transporter, permease [Fusobacterium mortiferum ATCC 9817] Length = 208 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 126/200 (63%), Gaps = 6/200 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +T+ + ++ V SL +G +++ RI +++++ + Y WIFRGTPLL+QLF ++Y Sbjct: 11 GLGLTVKLYIVTMVFSLPLGVILSLGRIS-KNSLLNNGIQIYTWIFRGTPLLLQLFFVYY 69 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP IGI F A ++ +N++AY EI R SI+ I KGQ++A+ +G+ QT++ I Sbjct: 70 GLPVIGITLSPFTAAALTFVINYTAYFCEIFRGSILGIDKGQYEAAKVLGMNYWQTMKRI 129 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAF 197 I+PQ + T+ PL +E I+++K TS+ S + + EI + ++ IV+ + P II C A Sbjct: 130 IIPQALITALPPLGNEAIALIKDTSLISALGMAEILRNSREIVTRDFSITPFII-C--AA 186 Query: 198 VYLILTSFCYIIQIKIESSV 217 +YLIL++ I ++E V Sbjct: 187 IYLILSTVVVIFFKRMEKKV 206 >gi|296332695|ref|ZP_06875155.1| putative ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673039|ref|YP_003864711.1| putative ABC transporter permease [Bacillus subtilis subsp. spizizenii str. W23] gi|296149975|gb|EFG90864.1| putative ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411283|gb|ADM36402.1| putative ABC transporter (permease) [Bacillus subtilis subsp. spizizenii str. W23] Length = 226 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 76/214 (35%), Positives = 128/214 (59%), Gaps = 2/214 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L I+SFP ++ I TL I+ +S +IG FI++ R+ ++ Y+ R Sbjct: 14 KLAIESFPYVI-KGIGYTLLISFVSMFAGTVIGLFISLARMS-QLALLRWPAKLYISFMR 71 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G P+LV LF++++G P+IGI F + A +I +LN +AYI+EI RS+I S+ KGQW+A+ Sbjct: 72 GVPILVILFILYFGFPYIGIEFSAVTAALIGFSLNSAAYIAEINRSAISSVEKGQWEAAS 131 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ QT+R IILPQ+I + PL++ + ++K++S+A+ IT+PE+ Q A+ I + Sbjct: 132 SLGLSYWQTMRGIILPQSIRIALPPLANVLLDLIKASSLAAMITVPELLQHAKIIGGREF 191 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + +Y A +Y + S Q +E + Sbjct: 192 DYMTMYILTALIYWAICSAAAAFQNILEKKYAHY 225 >gi|218296356|ref|ZP_03497099.1| polar amino acid ABC transporter, inner membrane subunit [Thermus aquaticus Y51MC23] gi|218243150|gb|EED09681.1| polar amino acid ABC transporter, inner membrane subunit [Thermus aquaticus Y51MC23] Length = 263 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 121/203 (59%), Gaps = 9/203 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + IS + L+IG + R+ S + L FY+W+ RGTPLLVQ+ + LP Sbjct: 57 ITLKLTLISGLAGLVIGVLAGMARLS-SRAWVRLPATFYIWVTRGTPLLVQILFAYNALP 115 Query: 83 HI------GI--VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 + G + A I+L+ N AY +E++R+ I +IPKGQW+A++++GL+ Sbjct: 116 FLLQPLWPGAQQALTPYWAAFIALSFNVGAYNAEVVRAGIQAIPKGQWEAAWSLGLSPVD 175 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 T+R ++LPQ + PL + +++LK +S+AS IT+ E+ + QRI+S T++P+ +Y Sbjct: 176 TMRFVVLPQALRIVVPPLVNNLVALLKDSSLASVITLAELALSGQRIISATFRPVEVYLA 235 Query: 195 LAFVYLILTSFCYIIQIKIESSV 217 +A +YL+LT+ ++E + Sbjct: 236 VAAIYLLLTTVLTQFTNRLEERL 258 >gi|229031184|ref|ZP_04187194.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1271] gi|228730223|gb|EEL81193.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1271] Length = 222 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 126/211 (59%), Gaps = 5/211 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 ++SFPQL + + +TL I +S +IS +IG +A++ + I+ Y+ FRGTP Sbjct: 9 LESFPQL-FKYVYITLGITLVSMIISFVIGIGLAIVTKN-KTKFLYPIVRVYISFFRGTP 66 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAI---IISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 LLVQLFV+++GLP I F A+ +I L+LN +AY+SEIIR S+ ++ GQ DA Sbjct: 67 LLVQLFVLYFGLPQIFPTFTVLTAMQATLIGLSLNNAAYLSEIIRGSLNAVESGQMDACL 126 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+T+ Q +R II PQ I + L + F+ +LK +S++ + + EI A+ + + +Y Sbjct: 127 SVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFALGVAEILAQAKMLAAQSY 186 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + Y +A VY I+T Q K+E + Sbjct: 187 RYMESYLAVAIVYWIITIVISWGQKKLEKKL 217 >gi|89074704|ref|ZP_01161162.1| Putative amino acid ABC transporter, permease protein [Photobacterium sp. SKA34] gi|89049468|gb|EAR55029.1| Putative amino acid ABC transporter, permease protein [Photobacterium sp. SKA34] Length = 216 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 73/179 (40%), Positives = 117/179 (65%), Gaps = 4/179 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL +A I + SLI+G +A+IRI+ +++++ Y+ FRGTPLLVQLF+++YGLP Sbjct: 22 TLLMATIGAIFSLIVGLILALIRIY-QLPLLNILTQLYISFFRGTPLLVQLFLLYYGLPQ 80 Query: 84 I---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 I + D+F A +I L+L+F+AY++E IR++I + + Q +AS IG+T QT+R II Sbjct: 81 IIPSLVGLDAFSAAVIGLSLHFAAYMAESIRAAITGVDRSQREASLTIGMTEWQTMRRII 140 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 LPQ + L + FI ++KSTS+A T+ +PEI AQ S++++ + +A +Y Sbjct: 141 LPQATRIALPSLMNYFIDMIKSTSLAFTLGVPEIMAKAQMEASSSFKFFEAFLAVAMIY 199 >gi|156742154|ref|YP_001432283.1| polar amino acid ABC transporter inner membrane subunit [Roseiflexus castenholzii DSM 13941] gi|156233482|gb|ABU58265.1| polar amino acid ABC transporter, inner membrane subunit [Roseiflexus castenholzii DSM 13941] Length = 224 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 75/215 (34%), Positives = 128/215 (59%), Gaps = 2/215 (0%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 +++ +L+ P LL VVTL IA IS ++ +I+G + + R++ + ++ Y+ Sbjct: 2 HDFIDLLSRVTPDLLQGT-VVTLQIAAISLILGMIVGLPVGIGRVY-GPVWLQRLLGAYI 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +F+GTPLL+QLF ++YGLP +GI A ++L LN +AY +E +RS++ S+ +GQ Sbjct: 60 TLFQGTPLLIQLFTVYYGLPDVGITLGRLQAAFLTLGLNSAAYQAEYLRSALQSVSEGQM 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A+ AIG+++ Q I ++LPQ + + S+E I++LK TSV I +P++ A+ + Sbjct: 120 VAARAIGMSKWQAIWSVVLPQALRLALPAWSNEAIAMLKYTSVVFLIAVPDLMGQAKILA 179 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 S + P+ IY +A Y+ L Y+I IE V Sbjct: 180 SRYFAPIQIYLIVAVFYIALVGIAYLILTMIERRV 214 >gi|163941155|ref|YP_001646039.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] gi|229012723|ref|ZP_04169893.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides DSM 2048] gi|229061107|ref|ZP_04198458.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH603] gi|163863352|gb|ABY44411.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] gi|228718190|gb|EEL69828.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH603] gi|228748558|gb|EEL98413.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides DSM 2048] Length = 222 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 75/197 (38%), Positives = 119/197 (60%), Gaps = 5/197 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 ++SFPQL + + +TL I +S +IS IG +A+I + I Y+ FRGTP Sbjct: 9 LESFPQL-FKYVYITLGITVVSMIISFFIGIGLAIITKN-KTKFLYPIARVYISFFRGTP 66 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAI---IISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 LLVQLFV+++GLP I F A+ +I L+LN +AY+SEIIR S+ ++ GQ DA Sbjct: 67 LLVQLFVLYFGLPQISPAFTVLTAMQATLIGLSLNNAAYLSEIIRGSLNAVESGQMDACL 126 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+T+ Q +R II PQ I + L + F+ +LK +S++ + + EI A+ + + +Y Sbjct: 127 SVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFALGVAEILAQAKMLAAQSY 186 Query: 187 QPLIIYCELAFVYLILT 203 + + Y +A VY I+T Sbjct: 187 RYMESYLAVAIVYWIIT 203 >gi|317122403|ref|YP_004102406.1| amino acid ABC transporter membrane protein, PAAT family [Thermaerobacter marianensis DSM 12885] gi|315592383|gb|ADU51679.1| amino acid ABC transporter membrane protein, PAAT family [Thermaerobacter marianensis DSM 12885] Length = 225 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 61/153 (39%), Positives = 104/153 (67%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 I+ + FY WI RGTPLLVQ+++I++GL G+V D F A +I+LT+N AY++EIIR+ Sbjct: 57 ILRRVGSFYTWIIRGTPLLVQIYIIYFGLVQYGVVLDPFPAAVIALTVNSGAYLAEIIRA 116 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I SIPKGQ +A+ ++G++ Q +R +ILPQ P+ +EF+++LK +S+ S I++ Sbjct: 117 GIESIPKGQMEAARSLGMSYGQAMRRVILPQAYRRMIPPMVNEFVTLLKDSSLVSIISME 176 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSF 205 E+ ++++ + T + + + AF YL++T+ Sbjct: 177 ELMLYSRQLANATARGMWFFGYAAFYYLVMTTL 209 >gi|310640333|ref|YP_003945091.1| inner membrane amino-acid abc transporter permease protein yecs [Paenibacillus polymyxa SC2] gi|309245283|gb|ADO54850.1| Inner membrane amino-acid ABC transporter permease protein yecS [Paenibacillus polymyxa SC2] Length = 215 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 130/217 (59%), Gaps = 8/217 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 L+ ++ P LL A TL I +S + LIIG +AV R+ + + + YV I Sbjct: 2 LELMWENVPFLLKGA-YYTLYITIVSMLFGLIIGLIVAVARLK-GNRPVRWLARMYVSII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTP+LVQ+ VI+YGL GI F S A ++L++N AY+SE R +I+++P+GQ +A+ Sbjct: 60 RGTPVLVQIAVIYYGLDDYGISFGSLTAACLALSINTGAYLSETFRGAILAVPQGQTEAA 119 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST- 184 YA G++ QT+ IILPQ + + P+ + F+ +LK TS+ S I + E+ + AQ + + Sbjct: 120 YATGMSPGQTMWRIILPQAVRIAIAPMGNTFVGMLKETSLVSVIGVSELMRQAQLLQAQY 179 Query: 185 -TYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQ 219 Y P ++ E+A +Y I++ F I++ ++E + + Sbjct: 180 LLYMPFLL--EIALMYWIMSIGFSAILE-RVEKRLAR 213 >gi|291482730|dbj|BAI83805.1| hypothetical protein BSNT_00597 [Bacillus subtilis subsp. natto BEST195] Length = 226 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 75/214 (35%), Positives = 129/214 (60%), Gaps = 2/214 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L+I+SFP ++ I TL I+ +S +IG FI++ R+ ++ Y+ R Sbjct: 14 KLVIESFPYVI-KGIGYTLLISFVSMFAGTVIGLFISLARMS-KLALLRWPAKLYISFMR 71 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G P+LV LF++++G P+I I F + A +I +LN +AYI+EI RS+I S+ KGQW+A+ Sbjct: 72 GVPILVILFILYFGFPYISIQFSAVTAALIGFSLNSAAYIAEINRSAISSVEKGQWEAAS 131 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ QT+R IILPQ+I + PL++ + ++K++S+A+ IT+PE+ Q A+ I + Sbjct: 132 SLGLSYWQTMRGIILPQSIHIALPPLANVLLDLIKASSLAAMITVPELLQHAKIIGGREF 191 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + +Y A +Y + S + Q +E + Sbjct: 192 DYMTMYILTALIYWAICSIAAVFQNILEKKYAHY 225 >gi|304317591|ref|YP_003852736.1| polar amino acid ABC transporter inner membrane protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779093|gb|ADL69652.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 220 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/204 (37%), Positives = 124/204 (60%), Gaps = 10/204 (4%) Query: 6 FNLIIDSFPQ---LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 NL S PQ L +++T+ + IS I ++G +A++++ S +IS I YV Sbjct: 1 MNLDFSSMPQYTQLFINGVIMTIELTLISVAIGAVLGLIVALMKMS-SVKVISFIGSAYV 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I RGTPLLVQ+ +I+ GLP GI F FV II+L++N + Y++EIIRS I ++ GQ Sbjct: 60 EIIRGTPLLVQILIIYNGLPQFGIKFPGFVVGIIALSMNSAGYVAEIIRSGIQAVDPGQM 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G++ +R++I+PQ I L +EF+ +LK +S+ S I ++ + A+ + Sbjct: 120 EASRSLGMSHSMAMRYVIIPQAIKNILPALGNEFVVMLKESSIVSVIGFADLTRQAEIVS 179 Query: 183 STTY---QPLIIYCELAFVYLILT 203 S TY +PLII +A +Y I+T Sbjct: 180 SVTYRAFEPLII---IAAIYFIMT 200 >gi|269792188|ref|YP_003317092.1| polar amino acid ABC transporter, inner membrane subunit [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099823|gb|ACZ18810.1| polar amino acid ABC transporter, inner membrane subunit [Thermanaerovibrio acidaminovorans DSM 6589] Length = 510 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 65/183 (35%), Positives = 119/183 (65%), Gaps = 1/183 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A VTL ++ + ++++ GF +A++R+F +L + Y+ RGTP+L+QLF IFY Sbjct: 295 AATVTLKVSICAMLLAMAFGFVLAIMRVFGPRWASTLALG-YIEAIRGTPVLIQLFFIFY 353 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP++GI F+A +I L +N++AY +E R+ ++++P+GQ +A+ A+ +TR Q +RH+ Sbjct: 354 GLPNVGIKLSPFMAGVIGLGMNYAAYEAENYRAGLLAVPRGQMEAALALSMTRWQALRHV 413 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ++PQ P++++FIS+LK +S+ S IT+ ++ + +I +T Y +A +Y Sbjct: 414 VVPQAFRVVIPPVTNDFISLLKDSSLVSIITMVDLTKAYGQIAATYYDYFGTGIMVAIIY 473 Query: 200 LIL 202 L+L Sbjct: 474 LLL 476 >gi|320157819|ref|YP_004190198.1| amino acid ABC transporterpermease [Vibrio vulnificus MO6-24/O] gi|319933131|gb|ADV87995.1| amino acid ABC transporter, permease protein [Vibrio vulnificus MO6-24/O] Length = 223 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 82/221 (37%), Positives = 133/221 (60%), Gaps = 13/221 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN +++ P LL + T+ +A + V SL++ +A IR+F I+ + Y+ F Sbjct: 5 FNYMLELLPILL-KYLGTTMEMAILGLVFSLVLAVILANIRVF-RLPILDPLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP I + D+F A +I LTL+F+AY++E IR++II I + Q Sbjct: 63 RGTPLLVQLFLLYYGLPQIFPIMVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQM 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G+T Q +R IILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 123 EASLSVGMTTTQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEA 182 Query: 183 STTYQPLIIYCELAFVY----LILTSFCYIIQIKIESSVTQ 219 S++++ + +A +Y L+LT +QI E+ + + Sbjct: 183 SSSFRFFEAFLAVALIYWGVVLVLTR----VQIWAENKLNK 219 >gi|15807149|ref|NP_295878.1| amino acid ABC transporter permease [Deinococcus radiodurans R1] gi|6459953|gb|AAF11703.1|AE002049_8 amino acid ABC transporter, permease protein [Deinococcus radiodurans R1] Length = 291 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 125/214 (58%), Gaps = 7/214 (3%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + + L +TL + +S +I L++G ++R S ++ F++W+ RGTP Sbjct: 74 VGQYADLFVEGAQMTLKLTLVSGLIGLLVGMIAGIMRSSPS-ALVRAPASFFIWLIRGTP 132 Query: 70 LLVQLFVIFYGLP------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 LLVQ+ ++ LP I + + F + +I+L LN AY +E+IR+ I+++P+GQ + Sbjct: 133 LLVQILFVYNALPPLLKTIGINLELNEFWSAVIALALNVGAYNAEVIRAGILAVPRGQSE 192 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++GL+ QT+ ++LPQ + PL + +++LK +S+ASTI + E+ + QR+ S Sbjct: 193 AARSLGLSAGQTMNAVVLPQALRIVVPPLVNNLVALLKDSSLASTIALLELTLSGQRVSS 252 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 ++QP+ + +A VYL LT+ + ++E V Sbjct: 253 ESFQPVPVLTTVAAVYLALTTVLTLFTDQLEKRV 286 >gi|302390115|ref|YP_003825936.1| amino acid ABC transporter membrane protein, PAAT family [Thermosediminibacter oceani DSM 16646] gi|302200743|gb|ADL08313.1| amino acid ABC transporter membrane protein, PAAT family [Thermosediminibacter oceani DSM 16646] Length = 220 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 119/202 (58%), Gaps = 9/202 (4%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHFYVWIFRGTPLL 71 L + + + I ++ +I + IG F+ + R+F I+ I YV + RGTPLL Sbjct: 14 NLFFKGALTAIEITLLAVLIGIFIGTFVGMGKMSRVF----ILKFICSAYVEVIRGTPLL 69 Query: 72 VQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 VQL + ++GLP I G F A +++L +N Y++EI+R I+++ +GQ +A+ ++G+ Sbjct: 70 VQLLIFYFGLPQILGFTIPEFTAAVLALGINSGGYVAEIVRGGILAVDRGQMEAARSLGM 129 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + Q +R+IILPQ PL +EFI++LK++S+A+TI E+ + AQ + TY+P Sbjct: 130 SHAQAMRYIILPQAFKKMIPPLGNEFITLLKNSSLATTIGFSELTRAAQIVAGNTYKPFE 189 Query: 191 IYCELAFVYLILT-SFCYIIQI 211 Y A Y I+T F +I+ + Sbjct: 190 PYLTAAAFYFIMTLGFSWILGV 211 >gi|37678191|ref|NP_932800.1| ABC-type amino acid transport system, permease component [Vibrio vulnificus YJ016] gi|37196930|dbj|BAC92771.1| ABC-type amino acid transport system, permease component [Vibrio vulnificus YJ016] Length = 236 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 81/221 (36%), Positives = 133/221 (60%), Gaps = 13/221 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN +++ P LL + T+ +A + V SL++ +A IR+F I+ + Y+ F Sbjct: 18 FNYMLELLPILL-KYLGTTMEMAILGLVFSLVLAVILANIRVF-RVPILDPLSQLYISFF 75 Query: 66 RGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP I + D+F A +I LTL+F+AY++E IR++II I + Q Sbjct: 76 RGTPLLVQLFLLYYGLPQIFPIMVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQM 135 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G+T Q +R +ILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 136 EASLSVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEA 195 Query: 183 STTYQPLIIYCELAFVY----LILTSFCYIIQIKIESSVTQ 219 S++++ + +A +Y L+LT +QI E+ + + Sbjct: 196 SSSFRFFEAFLAVALIYWGVVLVLTR----VQIWAENKLNK 232 >gi|33595878|ref|NP_883521.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella parapertussis 12822] gi|33600408|ref|NP_887968.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella bronchiseptica RB50] gi|33565957|emb|CAE36507.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella parapertussis] gi|33568007|emb|CAE31920.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella bronchiseptica RB50] Length = 230 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 63/181 (34%), Positives = 113/181 (62%), Gaps = 1/181 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + S V+++ +G + + R+ S ++S Y+ I RGTPLL+QLF I+YG+P Sbjct: 20 TLALFFCSAVLAVALGLLVCLCRLSKSR-VLSRGARLYIDIIRGTPLLLQLFYIYYGMPE 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+V ++FVA ++ LTLNF AY++E+ RS I S+ GQ++A+ A+GL + +R ++LPQ Sbjct: 79 LGVVINAFVAGVLGLTLNFGAYLAELFRSGIQSVDSGQYEAARALGLNKVDRLRRVVLPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + T L + + ++K TS+ + I++ E+ + + + T+Q L +Y + +Y + Sbjct: 139 AVRTVFPALGNYALVLIKETSLVAVISVYELMRAGEMLAGATFQALTVYTMVGAIYFAMC 198 Query: 204 S 204 S Sbjct: 199 S 199 >gi|27364436|ref|NP_759964.1| amino acid ABC transporter permease [Vibrio vulnificus CMCP6] gi|27360555|gb|AAO09491.1| Amino acid ABC transporter, permease protein [Vibrio vulnificus CMCP6] Length = 223 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 81/221 (36%), Positives = 133/221 (60%), Gaps = 13/221 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN +++ P LL + T+ +A + V SL++ +A IR+F I+ + Y+ F Sbjct: 5 FNYMLELLPILL-KYLGTTMEMAILGLVFSLVLAVILANIRVF-RLPILDPLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP I + D+F A +I LTL+F+AY++E IR++II I + Q Sbjct: 63 RGTPLLVQLFLLYYGLPQIFPIMVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQM 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G+T Q +R +ILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 123 EASLSVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEA 182 Query: 183 STTYQPLIIYCELAFVY----LILTSFCYIIQIKIESSVTQ 219 S++++ + +A +Y L+LT +QI E+ + + Sbjct: 183 SSSFRFFEAFLAVALIYWGVVLVLTR----VQIWAENKLNK 219 >gi|83589975|ref|YP_429984.1| amino acid ABC transporter permease [Moorella thermoacetica ATCC 39073] gi|83572889|gb|ABC19441.1| amino acid ABC transporter membrane protein, PAAT family [Moorella thermoacetica ATCC 39073] Length = 237 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 81/217 (37%), Positives = 121/217 (55%), Gaps = 21/217 (9%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 L+I S P LL A V TL I ++ + I+G + R+ + S + YV F Sbjct: 1 MGLVIQSLPYLLLGA-VQTLKITLVAVSLGCILGLVAGMGRLS-RRRLTSFLATCYVDFF 58 Query: 66 RGTPLLVQLFVIFYGLPHI---GIVF----------------DSFVAIIISLTLNFSAYI 106 RGTPLLVQ+F+++YG P + G F FVA ++ +LN AY+ Sbjct: 59 RGTPLLVQIFIVYYGFPQLLDEGQKFLMASLGMPQLLQTTHIPVFVAATLATSLNSGAYV 118 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EI R+ I SI +GQ +A+ ++G+T QT+R+I+LPQ PL +EFI++LK TS+ Sbjct: 119 AEIFRAGIQSIERGQVEAARSLGMTEGQTMRYIVLPQAFKRVIPPLGNEFIAMLKDTSLL 178 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 S I E+ + Q I T++PL IY +A +YLI+T Sbjct: 179 SVIGYVELTRQGQLISGATFKPLQIYFGVALIYLIMT 215 >gi|33592624|ref|NP_880268.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella pertussis Tohama I] gi|33572270|emb|CAE41822.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella pertussis Tohama I] gi|332382041|gb|AEE66888.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella pertussis CS] Length = 230 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 61/174 (35%), Positives = 110/174 (63%), Gaps = 1/174 (0%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 S V+++ +G + + R+ S ++S Y+ I RGTPLL+QLF I+YG+P +G+V ++ Sbjct: 27 SAVLAVALGLLVCLCRLSKSR-VLSRGARLYIDIIRGTPLLLQLFYIYYGMPELGVVINA 85 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 FVA ++ LTLNF AY++E+ RS I S+ GQ++A+ A+GL + +R ++LPQ + T Sbjct: 86 FVAGVLGLTLNFGAYLAELFRSGIQSVDSGQYEAARALGLNKVDRLRRVVLPQAVRTVFP 145 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 L + + ++K TS+ + I++ E+ + + + T+Q L +Y + +Y + S Sbjct: 146 ALGNYALVLIKETSLVAVISVYELMRAGEMLAGATFQALTVYTMVGAIYFAMCS 199 >gi|315924300|ref|ZP_07920523.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315622371|gb|EFV02329.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 215 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/206 (36%), Positives = 128/206 (62%), Gaps = 9/206 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ V+T+ +A ++ V I+G +A+ RI + + + + FYVW FRGTPLL+QLF+ Sbjct: 4 IFSGTVLTIEVAIVAVVFGAILGIVVALGRIS-HNKVANAVTWFYVWFFRGTPLLLQLFI 62 Query: 77 IFYGLPHIGI-------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +++ +P I + V D ++ +LN +AY++EIIR++I SIP+GQ +A+ A+G Sbjct: 63 VYFAVPIIYLNATGSTFVIDPMFCAFVTFSLNSTAYMAEIIRAAIESIPEGQMEAAKALG 122 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 ++ Q +R II+PQT PL +E I +LK TS+ STI + ++ +T + + S+T Sbjct: 123 MSYHQAMRKIIIPQTFKRLVAPLGNELIMLLKDTSLVSTIALFDVLRTVKTMASSTGN-W 181 Query: 190 IIYCELAFVYLILTSFCYIIQIKIES 215 I Y A +YL LT+ +I K+E+ Sbjct: 182 IYYLYAAAIYLFLTTILQVIFDKLET 207 >gi|110801621|ref|YP_699371.1| glutamine-binding periplasmic protein of glutamine ABC transporter [Clostridium perfringens SM101] gi|110682122|gb|ABG85492.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens SM101] Length = 502 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 128/212 (60%), Gaps = 5/212 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 +D P LL AI VT+ ++ ++ LI+G +A+IR++ ++ I Y+ FRGTP Sbjct: 291 LDLIPMLL-KAINVTISLSVFGVILGLIVGIALAMIRVY-KIPVLKQIAEVYISFFRGTP 348 Query: 70 LLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 LLVQLF++++G+P + ++F A +I L LN SAYI+EI+RSSI +I KGQ +A Sbjct: 349 LLVQLFLLYFGVPQVIPSLQNMNAFTAALIGLGLNASAYIAEILRSSIDAIDKGQMEACL 408 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+TR Q ++ ++LPQ + PL + F+ +K +S+A T+ + E+ AQ + +Y Sbjct: 409 SLGMTRAQALKRVVLPQAFRIAIPPLGNIFVDTVKGSSLAFTLGVVELLAKAQMEAAASY 468 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 + Y +A +Y I+ F +Q +E ++ Sbjct: 469 KFFESYVVVAIMYWIIIGFFNYLQKILEKKLS 500 >gi|15806050|ref|NP_294752.1| amino acid ABC transporter permease [Deinococcus radiodurans R1] gi|6458756|gb|AAF10601.1|AE001954_5 amino acid ABC transporter, permease protein [Deinococcus radiodurans R1] Length = 216 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 81/211 (38%), Positives = 136/211 (64%), Gaps = 3/211 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FNLI+ + P LL A++ T+ I +S V+ ++ G +A+ R+ + L + F + + Sbjct: 3 FNLIVQNLPFLLQGALM-TIKITALSLVLGVVGGTLVALARLSPFKPLSWLALTF-IELV 60 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQ+FVIF+GLP + + F A + + ++N +AY++EI+R+ I +PKGQ +A Sbjct: 61 RGTPLLVQIFVIFFGLPQLLEHPINEFWAGVAAFSVNSAAYVAEIVRAGIQGLPKGQTEA 120 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 S ++GL+ QT+RHIILPQ T PL +E IS+LK++S+ S I+I E+ + Q + S Sbjct: 121 SRSLGLSPAQTMRHIILPQAFTRVLPPLVNEAISLLKNSSLLSAISIVELTRAGQLVSSR 180 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 T++P +Y ++ +YL +T F + ++E+ Sbjct: 181 TFKPFEMYLAVSLIYLAMTLFLSWVARRLEA 211 >gi|329770427|ref|ZP_08261809.1| hypothetical protein HMPREF0433_01573 [Gemella sanguinis M325] gi|328836550|gb|EGF86210.1| hypothetical protein HMPREF0433_01573 [Gemella sanguinis M325] Length = 213 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 125/200 (62%), Gaps = 1/200 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A + TL ++ I+ ++ LI+G + + +I + + ++I YV I R TP+LVQ+ +I++ Sbjct: 15 ATITTLKVSLIALLVGLILGIVVCLAKIS-TYRVFNIIATIYVEIIRNTPILVQIMIIYF 73 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 LP +GI F F++ II+L++N AY+SEI RS I++I KGQ +A ++GL+ QT++ I Sbjct: 74 ALPEVGISFTPFMSAIIALSINSGAYVSEIFRSGILAIDKGQMEAGRSLGLSYFQTMKLI 133 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + S L +EFIS++K +S+ + + +I TA + + TYQ Y A +Y Sbjct: 134 ILPQALKNSLPSLGNEFISLVKESSIVYFVGVADIMFTANTVKNATYQTFGPYLVAAAIY 193 Query: 200 LILTSFCYIIQIKIESSVTQ 219 ++TS ++ ++E + + Sbjct: 194 FVITSILSLLVKRLEKKLAK 213 >gi|260893885|ref|YP_003239982.1| polar amino acid ABC transporter, inner membrane subunit [Ammonifex degensii KC4] gi|260866026|gb|ACX53132.1| polar amino acid ABC transporter, inner membrane subunit [Ammonifex degensii KC4] Length = 233 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 80/222 (36%), Positives = 125/222 (56%), Gaps = 26/222 (11%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 MK W NL P LL A V TL I C++ + + G + + R+ + +I + Sbjct: 1 MKLIWRNL-----PYLLLGA-VETLKITCLAVSLGCVFGLIVGLGRLS-RNRVIRFLSTC 53 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISL-------------------TLN 101 YV RGTPLLVQ+F++++GLP + +F+ L +LN Sbjct: 54 YVDFLRGTPLLVQIFIVYFGLPQLLEQLQNFLVESWGLPRLFTSTHIPAFAAAIIATSLN 113 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 AY++EI R+ I SIPKGQ +A+ ++G+T +Q +R++ILPQ PL +EFI++LK Sbjct: 114 SGAYVAEIFRAGIQSIPKGQMEAARSLGMTYRQAMRYVILPQAFRNIIPPLGNEFIAMLK 173 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 TS+ S I I E+ + Q I+++T++P I+ +A +YLILT Sbjct: 174 DTSLLSVIGIVELTRRGQIIIASTFRPFEIWLTVALIYLILT 215 >gi|329911825|ref|ZP_08275609.1| ABC-type amino acid transport system, permease component [Oxalobacteraceae bacterium IMCC9480] gi|327545793|gb|EGF30920.1| ABC-type amino acid transport system, permease component [Oxalobacteraceae bacterium IMCC9480] Length = 219 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 104/159 (65%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + RGTPLLVQ+F+I+YGLP IGI F A I++L+LN A++SE +R ++ + G Sbjct: 57 YVSLIRGTPLLVQVFLIYYGLPSIGIEFSPVSAGILALSLNAGAFLSESLRGAVQGVSAG 116 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW ASY++GLT QT+R ++ PQ + + + + IS++K TS+ S IT+ E+ + Sbjct: 117 QWSASYSLGLTWVQTLRFVVAPQALRIAVPSMGNTLISLIKDTSLVSVITVTELMLATKE 176 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 +++TT++PL +Y A +Y L+ ++Q ++E + + Sbjct: 177 VIATTFRPLPLYVTAALLYWCLSMLFEVVQRRLEKRLQR 215 >gi|209965982|ref|YP_002298897.1| amino acid ABC transporter, permease protein [Rhodospirillum centenum SW] gi|209959448|gb|ACJ00085.1| amino acid ABC transporter, permease protein [Rhodospirillum centenum SW] Length = 226 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 125/207 (60%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 NLI++S PQLL + VVT+ + +S V+ L++ IAV+R+ +S++ Y ++F Sbjct: 3 LNLILESLPQLL-SGTVVTVELVALSLVLGLVLAVGIAVLRLS-GIRAVSMLAGGYTFLF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 R TPLLVQ+F+I+YGL V +S + I++LTLN +AY EIIR I + Sbjct: 61 RSTPLLVQIFLIYYGLGQFETVRESILWPFLREPYWCAILALTLNTAAYTGEIIRGGIRA 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P GQ +A+ A+G++ + R I+LPQ + +E I +++++S+ASTIT+ E+ Sbjct: 121 VPFGQIEAARAVGMSGRLLFRRIVLPQAFRQALPAYGNEMIQMVQASSLASTITLMELTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I S T+QP+ ++ +YL + Sbjct: 181 AARAIASRTFQPVEVFVIAGALYLAMN 207 >gi|110798792|ref|YP_696773.1| His/Glu/Gln/Arg/opine amino acid ABC transporter amino acid-binding protein/permease [Clostridium perfringens ATCC 13124] gi|168208796|ref|ZP_02634421.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens B str. ATCC 3626] gi|168212869|ref|ZP_02638494.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens CPE str. F4969] gi|168215721|ref|ZP_02641346.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens NCTC 8239] gi|110673439|gb|ABG82426.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens ATCC 13124] gi|170713169|gb|EDT25351.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens B str. ATCC 3626] gi|170715496|gb|EDT27678.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens CPE str. F4969] gi|182382310|gb|EDT79789.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens NCTC 8239] Length = 502 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 127/212 (59%), Gaps = 5/212 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 +D P LL AI VT+ ++ ++ LI+G +A+IR++ ++ I Y+ FRGTP Sbjct: 291 LDLIPMLL-KAINVTISLSVFGMILGLIVGIALAMIRVY-KIPVLKQIAEVYISFFRGTP 348 Query: 70 LLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 LLVQLF++++G+P + +F A +I L LN SAYI+EI+RSSI +I KGQ +A Sbjct: 349 LLVQLFLLYFGVPQVIPSLQNMSAFTAALIGLGLNASAYIAEILRSSIDAIDKGQMEACL 408 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+TR Q ++ ++LPQ + PL + F+ +K +S+A T+ + E+ AQ + +Y Sbjct: 409 SLGMTRAQALKRVVLPQAFRIAIPPLGNIFVDTVKGSSLAFTLGVVELLAKAQMEAAASY 468 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 + Y +A +Y I+ F +Q +E ++ Sbjct: 469 KFFESYVVVAIMYWIIIGFFNYLQKILEKKLS 500 >gi|319784006|ref|YP_004143482.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169894|gb|ADV13432.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 215 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 61/150 (40%), Positives = 99/150 (66%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 I+ I YV +FRGTP L+QLFV+++G P IGI + F A +I L LN AY++E IR Sbjct: 48 ILRTIGTVYVSLFRGTPCLIQLFVLYFGGPQIGINLEPFAAGVIGLGLNIGAYMAESIRG 107 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +++++ +GQ +A+ IG +R QT+R ++LPQ PL +++LK +++ STI++ Sbjct: 108 ALVAVDRGQTEAARTIGFSRFQTLRKVVLPQAARLMIRPLGVNTVALLKGSALVSTISVV 167 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 E+ TAQR + +TY+P I+ A +Y+I+ Sbjct: 168 ELTYTAQRFIGSTYKPFEIFGVAALLYMIM 197 >gi|168205901|ref|ZP_02631906.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens E str. JGS1987] gi|182624018|ref|ZP_02951806.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens D str. JGS1721] gi|170662631|gb|EDT15314.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens E str. JGS1987] gi|177910911|gb|EDT73265.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens D str. JGS1721] Length = 519 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 127/212 (59%), Gaps = 5/212 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 +D P LL AI VT+ ++ ++ LI+G +A+IR++ ++ I Y+ FRGTP Sbjct: 308 LDLIPMLL-KAINVTISLSVFGMILGLIVGIALAMIRVY-KIPVLKQIAEVYISFFRGTP 365 Query: 70 LLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 LLVQLF++++G+P + +F A +I L LN SAYI+EI+RSSI +I KGQ +A Sbjct: 366 LLVQLFLLYFGVPQVIPSLQNMSAFTAALIGLGLNASAYIAEILRSSIDAIDKGQMEACL 425 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+TR Q ++ ++LPQ + PL + F+ +K +S+A T+ + E+ AQ + +Y Sbjct: 426 SLGMTRAQALKRVVLPQAFRIAIPPLGNIFVDTVKGSSLAFTLGVVELLAKAQMEAAASY 485 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 + Y +A +Y I+ F +Q +E ++ Sbjct: 486 KFFESYVVVAIMYWIIIGFFNYLQKILEKKLS 517 >gi|169343527|ref|ZP_02864526.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens C str. JGS1495] gi|169298087|gb|EDS80177.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens C str. JGS1495] Length = 519 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 127/212 (59%), Gaps = 5/212 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 +D P LL AI VT+ ++ ++ LI+G +A+IR++ ++ I Y+ FRGTP Sbjct: 308 LDLIPMLL-KAINVTISLSVFGMILGLIVGIALAMIRVY-KIPVLKQIAEVYISFFRGTP 365 Query: 70 LLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 LLVQLF++++G+P + +F A +I L LN SAYI+EI+RSSI +I KGQ +A Sbjct: 366 LLVQLFLLYFGVPQVIPSLQNMSAFTAALIGLGLNASAYIAEILRSSIDAIDKGQMEACL 425 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+TR Q ++ ++LPQ + PL + F+ +K +S+A T+ + E+ AQ + +Y Sbjct: 426 SLGMTRAQALKRVVLPQAFRIAIPPLGNIFVDTVKGSSLAFTLGVVELLAKAQMEAAASY 485 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 + Y +A +Y I+ F +Q +E ++ Sbjct: 486 KFFESYVVVAIMYWIIIGFFNYLQKILEKKLS 517 >gi|260655293|ref|ZP_05860781.1| amino acid ABC transporter, permease/substrate-binding protein [Jonquetella anthropi E3_33 E1] gi|260629741|gb|EEX47935.1| amino acid ABC transporter, permease/substrate-binding protein [Jonquetella anthropi E3_33 E1] Length = 217 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 65/191 (34%), Positives = 115/191 (60%), Gaps = 3/191 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF-FSDTIISLIMHFYVWIFRGTPLLVQ 73 L +VT+ + +I G F+ R+ F+ + + Y+ + RGTPL+VQ Sbjct: 13 HLFLNGALVTVKASLFGVLIGTAGGLFVGAFRVLPFAP--LRWLAWLYISVLRGTPLMVQ 70 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LF+I++GLP +G+ D+F+A ++ + +N SAY+ EI+R I SIP+GQW+A+ +GL+ Sbjct: 71 LFLIYFGLPELGVNLDAFLAGVLGIGINSSAYVGEIVRGGIESIPRGQWEAAKVLGLSYW 130 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q++ II+PQ + + + +EF++++K +S+ S + I ++ Q Q++ S TY + Sbjct: 131 QSLWTIIMPQAVRSMLPAIGNEFVALIKESSLLSVLAISDLTQAGQQVRSVTYASFESFI 190 Query: 194 ELAFVYLILTS 204 + VYL LTS Sbjct: 191 VVGLVYLFLTS 201 >gi|290968909|ref|ZP_06560446.1| ABC transporter, permease protein [Megasphaera genomosp. type_1 str. 28L] gi|290781205|gb|EFD93796.1| ABC transporter, permease protein [Megasphaera genomosp. type_1 str. 28L] Length = 222 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 79/199 (39%), Positives = 120/199 (60%), Gaps = 3/199 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F LI DS P LL A VT+ I IS + I+G ++V R+ I+ + YV I Sbjct: 6 FGLIWDSLP-LLIAGAGVTIEITAISVGLGFILGLVVSVCRLS-GWKILKAVAVCYVNIL 63 Query: 66 RGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQ+F+I++ LP IG + F+A + + ++N AY+SEI R+ I ++ +GQ +A Sbjct: 64 RGTPLLVQIFLIYFALPMLIGQRINPFLAAVAACSINSGAYVSEIFRAGIQAVDRGQMEA 123 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++GL+ QT+ +IILPQ PL +EFIS+ K TS+ S I E+ + Q I++ Sbjct: 124 GRSLGLSWMQTMWYIILPQAFRKVIPPLGNEFISMTKETSLVSVIGFEELTRRGQLIIAK 183 Query: 185 TYQPLIIYCELAFVYLILT 203 TY I+ +A +YL++T Sbjct: 184 TYGSFEIWLTVAAIYLVMT 202 >gi|224369139|ref|YP_002603303.1| GlnP5 [Desulfobacterium autotrophicum HRM2] gi|223691856|gb|ACN15139.1| GlnP5 [Desulfobacterium autotrophicum HRM2] Length = 226 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 117/193 (60%), Gaps = 2/193 (1%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + P++L V+TL + + +I ++IG ++++R++ ++ Y+ +FRGTPLL Sbjct: 11 ALPEMLQGT-VITLKLTAGALLIGILIGLPLSLVRVY-GGKLLQPFCSAYLTLFRGTPLL 68 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 VQLFV++YGLP +GI F A ++L N +AY E R +I ++ KGQ A+ IG++ Sbjct: 69 VQLFVVYYGLPELGISFSRMTAAFLTLGCNSAAYQCEYFRGAIQAVSKGQMRAARGIGMS 128 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 + Q IRHIILPQ + S+EFI+++K T++ I +P++ A+ + S + P+ Sbjct: 129 KLQGIRHIILPQALRLVIPAWSNEFIAMVKYTAIVFLIAVPDLMSRAKILSSQNFAPIQT 188 Query: 192 YCELAFVYLILTS 204 Y +A +YL+L Sbjct: 189 YILVALIYLVLVG 201 >gi|164687608|ref|ZP_02211636.1| hypothetical protein CLOBAR_01249 [Clostridium bartlettii DSM 16795] gi|164603382|gb|EDQ96847.1| hypothetical protein CLOBAR_01249 [Clostridium bartlettii DSM 16795] Length = 223 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 124/204 (60%), Gaps = 10/204 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIFRG 67 +++ + +L T+ ++ +S V+ ++G I ++++ S+ ++ L+ YV I RG Sbjct: 5 VLNGYYGVLMEGTKYTILVSLVSLVVGFVLGLLICLMKM--SNFKVLKLLSSAYVQILRG 62 Query: 68 TPLLVQLFVIFYGLPHIGIVF-------DSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 TPL VQ+F+I++GLP +GI F F+A +L++N SAYI+EI RS I S+ KG Sbjct: 63 TPLFVQVFIIYFGLPQLGIDFPDIGPISSKFIAGAFALSINSSAYIAEIFRSGIQSVDKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++GL T+R +I+PQ I L++EFI+++K +SV S I EI A Sbjct: 123 QMEASRSLGLGYADTMRFVIVPQAIKNVLPALANEFITLVKESSVLSVIGTQEIMFKAGI 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +V+ Y+P+ Y A +YL+LT+ Sbjct: 183 VVTAVYRPMEPYIAAAVIYLVLTT 206 >gi|254424601|ref|ZP_05038319.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC 7335] gi|196192090|gb|EDX87054.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC 7335] Length = 225 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 121/203 (59%), Gaps = 8/203 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 I+D+ P LL A++ TL + +S I G + + R+ + I L+ Y+ FR Sbjct: 6 GFILDAVPALLKGALI-TLQLTAVSVAFGSIGGIALGIARLSKAGPI-RLLARAYIDFFR 63 Query: 67 GTPLLVQLFVIFYGLP------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 GTPLLVQLF+I++G+P + F+ + A ++ L+LN +AY++EI+R+ I SI G Sbjct: 64 GTPLLVQLFMIYFGVPALVRTFGLDFTFNQWGAAVLGLSLNSAAYLAEIVRAGIQSIEVG 123 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++GL QT+++++ PQ + PL +EFI++LK TS+ + I E+F+ Q Sbjct: 124 QKEAAESLGLDSSQTMQYVVFPQALRRMVPPLGNEFITLLKDTSLVAVIGYQELFRQGQL 183 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 IV+ ++ I+ +A +YL L Sbjct: 184 IVARNFRSFEIFFAVALIYLALN 206 >gi|169627382|ref|YP_001701031.1| amino acid ABC transporter permease [Mycobacterium abscessus ATCC 19977] gi|169239349|emb|CAM60377.1| Probable amino acid ABC transporter, permease [Mycobacterium abscessus] Length = 481 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 78/213 (36%), Positives = 130/213 (61%), Gaps = 1/213 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L++D+ + A I VTLP+ ISFVI L+I +A+ R+ +++ + Y+ + R Sbjct: 266 QLVLDNLWPMARAMITVTLPLTAISFVIGLVIALGVALARMS-GHRVVTGLARIYISVIR 324 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QLF+IF+ LP G+ F A +I+ +LN Y +EIIRSSI+SIP+GQW+A+ Sbjct: 325 GTPLLLQLFLIFFALPEFGVKISPFPAAVIAFSLNVGGYAAEIIRSSILSIPRGQWEAAS 384 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G++ T+ I++PQ + PLS+ IS++K TS+AS I + ++ +TAQ + T+ Sbjct: 385 SLGMSYSTTLWRIVIPQASRVAVPPLSNTLISLVKDTSLASAILVTDVMRTAQVAAAPTF 444 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 Q +Y Y I+ +Q ++E + + Sbjct: 445 QFFTLYVTAGVYYWIVCMAMSAVQDRLEQRLEK 477 >gi|282856520|ref|ZP_06265795.1| polar amino acid ABC transporter, inner membrane subunit [Pyramidobacter piscolens W5455] gi|282585641|gb|EFB90934.1| polar amino acid ABC transporter, inner membrane subunit [Pyramidobacter piscolens W5455] Length = 217 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 65/191 (34%), Positives = 114/191 (59%), Gaps = 3/191 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF-FSDTIISLIMHFYVWIFRGTPLLVQ 73 + + + VT+ + + +G FI R+ F + +M Y+++ RGTPL++Q Sbjct: 13 HMFWKGVCVTIQASFFGVLFGSALGIFIGSFRVMPFKP--LRYLMATYIYVLRGTPLMIQ 70 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LF+I++GLP +G+ D+ A I+ + +N S Y+ EI+R I +PKGQW+A+ +GL+ Sbjct: 71 LFLIYFGLPALGVNLDAATAGILGIGINSSGYVGEIVRGGIEGVPKGQWEAAKMLGLSYW 130 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 QT++ IILPQ I + +EF++++K +S+ S + I ++ Q++ S TY + Sbjct: 131 QTMKSIILPQAIRHMLPAIGNEFVTLIKESSLLSVLAISDLTMVGQQVRSVTYASFETFI 190 Query: 194 ELAFVYLILTS 204 +A VYL+LTS Sbjct: 191 FVALVYLVLTS 201 >gi|28896781|ref|NP_796386.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD 2210633] gi|260362451|ref|ZP_05775393.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|260876541|ref|ZP_05888896.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|260897402|ref|ZP_05905898.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|28804989|dbj|BAC58270.1| amino acid ABC transproter, permease protein [Vibrio parahaemolyticus RIMD 2210633] gi|308087935|gb|EFO37630.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|308090363|gb|EFO40058.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|308111819|gb|EFO49359.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus K5030] Length = 223 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 80/219 (36%), Positives = 130/219 (59%), Gaps = 9/219 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN +++ P LL + T+ +A V SLI+ +A IR+F ++ + Y+ F Sbjct: 5 FNYMLELLPILL-KYLGTTMEMATWGLVFSLILAVILANIRVF-KLPVLDQLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQLF+++YGLP I GI D+F A +I LTL+F+AY++E IR++II I + Sbjct: 63 RGTPLLVQLFLLYYGLPQIFPVMVGI--DAFSAAVIGLTLHFAAYMAESIRAAIIGIDRN 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G+T Q +R +ILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 121 QMEASLSVGMTTPQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQM 180 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S++++ + +A +Y + +QI E+ + + Sbjct: 181 EASSSFRFFEAFLAVALIYWGVVVILTRVQIWAEAKLNK 219 >gi|229134354|ref|ZP_04263167.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST196] gi|228648975|gb|EEL04997.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST196] Length = 222 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 74/197 (37%), Positives = 118/197 (59%), Gaps = 5/197 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 ++SFPQL + + +TL I +S +IS IG +A+I + I Y+ FRGTP Sbjct: 9 LESFPQL-FKYVYITLGITVVSMIISFFIGIGLAIITKN-KTKFLYPIARVYISFFRGTP 66 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAI---IISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 LLVQLFV+++GLP I F A+ +I L+LN +AY+SEIIR S+ ++ GQ DA Sbjct: 67 LLVQLFVLYFGLPQISPAFTVLTAMQATLIGLSLNNAAYLSEIIRGSLNAVESGQMDACL 126 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+T+ Q +R II PQ I + + F+ +LK +S++ + + EI A+ + + +Y Sbjct: 127 SVGMTKAQAMRQIIFPQAIRVAVPSFGNNFVGLLKESSLSFALGVAEILAQAKMLAAQSY 186 Query: 187 QPLIIYCELAFVYLILT 203 + + Y +A VY I+T Sbjct: 187 RYMESYLAVAIVYWIIT 203 >gi|194016112|ref|ZP_03054727.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Bacillus pumilus ATCC 7061] gi|194012467|gb|EDW22034.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Bacillus pumilus ATCC 7061] Length = 225 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 73/210 (34%), Positives = 134/210 (63%), Gaps = 4/210 (1%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPL 70 SFP ++ I +TL I+ +S I+GFFIA+ R+ ++T ++ L Y+ RG P+ Sbjct: 18 SFPFVM-KGIWLTLLISFVSMFFGTILGFFIALARM--ANTWMLWLPARLYISFMRGVPI 74 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LV LF++++G P+IGI F + A II + N +AYI+EI R+++ S+P GQ +A+ ++GL Sbjct: 75 LVILFILYFGFPYIGIEFTAVTAAIIGFSFNSAAYIAEINRAALSSVPSGQVEAAKSLGL 134 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + QT+R +ILPQ++ + PL++ + ++K++S+A+ IT+PE+FQ A+ + + + Sbjct: 135 SYWQTMRGVILPQSVRIALPPLTNVMLDLIKASSLAAMITVPELFQQAKIVGGREFDYMT 194 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +Y +A +Y + S ++Q +E ++ Sbjct: 195 MYILVALIYWGICSVVSLLQDFLEKHYAKY 224 >gi|157691099|ref|YP_001485561.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032] gi|157679857|gb|ABV61001.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus SAFR-032] Length = 225 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 73/210 (34%), Positives = 134/210 (63%), Gaps = 4/210 (1%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPL 70 SFP ++ I +TL I+ +S I+GFFIA+ R+ ++T ++ L Y+ RG P+ Sbjct: 18 SFPFVM-KGIWLTLLISFVSMFFGTILGFFIALARM--ANTWMLWLPARLYISFMRGVPI 74 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LV LF++++G P+IGI F + A II + N +AYI+EI R+++ S+P GQ +A+ ++GL Sbjct: 75 LVILFILYFGFPYIGIEFTAVTAAIIGFSFNSAAYIAEINRAALSSVPSGQVEAAKSLGL 134 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + QT+R +ILPQ++ + PL++ + ++K++S+A+ IT+PE+FQ A+ + + + Sbjct: 135 SYWQTMRGVILPQSVRIALPPLANIMLDLIKASSLAAMITVPELFQQAKIVGGREFDYMT 194 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +Y +A +Y + S ++Q +E ++ Sbjct: 195 MYILVALIYWGICSVVSLLQDFLEKRYAKY 224 >gi|323706491|ref|ZP_08118051.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacterium xylanolyticum LX-11] gi|323534153|gb|EGB23944.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacterium xylanolyticum LX-11] Length = 220 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 124/204 (60%), Gaps = 10/204 (4%) Query: 6 FNLIIDSFPQ---LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 NL S PQ L +++T+ + IS I ++G +A++++ S I+S I YV Sbjct: 1 MNLDFSSMPQYTQLFINGLIMTIELTIISVAIGAVLGLIVALMKMS-SVKILSFIGSAYV 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I RGTPLLVQ+ +I+ GLP GI F FV II+L++N + Y++EIIRS I ++ GQ Sbjct: 60 EIIRGTPLLVQILIIYNGLPQFGIKFPGFVVGIIALSMNSAGYVAEIIRSGIQAVDPGQM 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G++ +R++I+PQ I L +EF+ +LK +S+ S I ++ + A+ + Sbjct: 120 EASRSLGMSHSMAMRYVIIPQAIKNILPALGNEFVVMLKESSIVSVIGFADLTRQAEIVS 179 Query: 183 STTY---QPLIIYCELAFVYLILT 203 S TY +PLII +A +Y ++T Sbjct: 180 SVTYRAFEPLII---IAAIYFVMT 200 >gi|258405417|ref|YP_003198159.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] gi|257797644|gb|ACV68581.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] Length = 360 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 79/208 (37%), Positives = 127/208 (61%), Gaps = 2/208 (0%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F L V+T + ++ ++S + G +A+ RI +I L F++WIFRGTPLL+ Sbjct: 147 FTPALAKGAVMTFVLVVVTMLVSPVGGLLVALGRISTFPPLIGLCW-FFIWIFRGTPLLL 205 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I+YGLP +G+ VA ++ L LN+SAY++EIIR +I SI GQ +A+ A+G+T Sbjct: 206 QLFFIYYGLPSMGVTLSPLVAALLGLGLNYSAYLAEIIRGAIQSIDSGQMEAAKALGMTY 265 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 Q +R +I+PQT P+ +EFI+++K T++ STI + E+ + A ++ + TY + + Sbjct: 266 GQAMRRVIIPQTYKRLMPPVGNEFIALIKDTALVSTIAMVELMRAADQLFN-TYFDITVL 324 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQH 220 A +YL+ TS + KIE V + Sbjct: 325 VLAAIIYLLFTSAFTVTFEKIEKRVGAY 352 >gi|153827643|ref|ZP_01980310.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-2] gi|149737881|gb|EDM52786.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-2] Length = 223 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 75/197 (38%), Positives = 123/197 (62%), Gaps = 5/197 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ +++ P LL + TL +A V +LI+ F+A IR+F +++ + Y+ F Sbjct: 5 FHYMLELLPILL-KYLGTTLEMASWGLVFALILALFLANIRVF-KVPVLAPLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP + + D+F A +I LTL+F+AY++E IR++II I + Q Sbjct: 63 RGTPLLVQLFLLYYGLPQVFPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQM 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G+T Q +R IILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 123 EASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEA 182 Query: 183 STTYQPLIIYCELAFVY 199 S++++ + +A +Y Sbjct: 183 SSSFRFFEAFLAVALIY 199 >gi|293193555|ref|ZP_06609825.1| amino acid ABC transporter, permease protein [Actinomyces odontolyticus F0309] gi|292819911|gb|EFF78913.1| amino acid ABC transporter, permease protein [Actinomyces odontolyticus F0309] Length = 219 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 81/219 (36%), Positives = 120/219 (54%), Gaps = 2/219 (0%) Query: 6 FNL-IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 NL I+ + L A ++TL IA I V SL +G +A IR + + + I YV + Sbjct: 1 MNLDILARYAPLYVDAAILTLRIAAIGIVGSLAVGLLVAAIR-QYRIPVAAQIAAAYVEL 59 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 R TPLLVQLF I++GLP +GI + II L AY++E +RS + SI QW++ Sbjct: 60 SRNTPLLVQLFFIYFGLPRVGIKWSGETCAIIGLIFLGGAYMAEALRSGLDSIATIQWES 119 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 S A+GLTR QT+RH+ LPQ I TS PL++ I ++K TSV S + +P++ A+ ++ Sbjct: 120 SAALGLTRTQTLRHVALPQAIATSVPPLAANVIFLIKETSVVSVVALPDLVYVAKDLIGM 179 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 +Y L YL++ I IE V + + Sbjct: 180 SYNTSEALILLVIAYLVILLPVSIAARLIEKKVRRGGFG 218 >gi|290580364|ref|YP_003484756.1| putative amino acid ABC transporter permease [Streptococcus mutans NN2025] gi|254997263|dbj|BAH87864.1| putative amino acid ABC transporter permease protein [Streptococcus mutans NN2025] Length = 217 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 77/213 (36%), Positives = 128/213 (60%), Gaps = 2/213 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LII S +L I TL I+ +SF+ ++G FI+ +R+ + + SL Y+ I Sbjct: 5 FHLIIKSLSFVL-TGIPYTLGISVLSFLTGCLLGIFISFLRMSQNSWLRSL-ARIYISIM 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG P+LV LFV+++GLP+ + + + I + +AYISEI R+S+ ++ KGQW+A+ Sbjct: 63 RGVPMLVVLFVLYFGLPYFEVQLSALLCAYIGFSAVSAAYISEIFRASVSAVDKGQWEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL ++ IILPQ + PL + + ILKS+S+A+ IT+P+IFQ A+ I Sbjct: 123 RALGLPMTSILKSIILPQAFRIAIAPLGNVMLDILKSSSLAAMITVPDIFQNAKIIGGRE 182 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Y + +Y +AF+Y +L + Q +E+ ++ Sbjct: 183 YDYMSMYILIAFIYWLLCFLFEMFQNHLEAKLS 215 >gi|323493778|ref|ZP_08098896.1| putative amino-acid ABC transporter permease PatM [Vibrio brasiliensis LMG 20546] gi|323311912|gb|EGA65058.1| putative amino-acid ABC transporter permease PatM [Vibrio brasiliensis LMG 20546] Length = 223 Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 76/217 (35%), Positives = 129/217 (59%), Gaps = 5/217 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN ++D P LL + T+ +A + SL++ +A IR+F ++ + Y+ F Sbjct: 5 FNYMLDLMPILL-KYLGTTMEMATWGLLFSLVLAVILANIRVF-RVPVLDQLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP + + D+F A +I LTL+F+AY++E IR++II I + Q Sbjct: 63 RGTPLLVQLFLLYYGLPQVFPWLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQM 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G+T Q +R +ILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 123 EASLSVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEA 182 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S++++ + +A +Y + +QI E+ + + Sbjct: 183 SSSFRFFEAFLAVALIYWGVVVILTRVQIWAEAKLNK 219 >gi|310827296|ref|YP_003959653.1| hypothetical protein ELI_1704 [Eubacterium limosum KIST612] gi|308739030|gb|ADO36690.1| hypothetical protein ELI_1704 [Eubacterium limosum KIST612] Length = 221 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 126/211 (59%), Gaps = 9/211 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +VTL IA ++ + I G IA+ RI + I + + FY+W FRGTPLL+QLF+ Sbjct: 10 IFDGTIVTLEIAVVAIIFGAIFGVVIALGRIS-KNKIFNGLSWFYIWFFRGTPLLLQLFI 68 Query: 77 IFYGLPHI-----GIVF--DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 IFY +P + G F D + I+ +LN +AY++EIIR++I SI GQ +A+ A+G Sbjct: 69 IFYAVPIVYLDMTGATFEIDPMICAFITFSLNSTAYLAEIIRAAIESIDHGQMEAAKALG 128 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 ++ KQ + II+PQT P+ +E I +LK TS+ STI + ++ +T + + S T Sbjct: 129 MSYKQAMGKIIIPQTFKRLVAPVGNELIMLLKDTSLVSTIALFDLLRTVKTMASAT-GSW 187 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + Y A +YL LT+ ++ K+E+ + + Sbjct: 188 VYYIYAAVIYLFLTTILQVVFDKLENKLGAY 218 >gi|91228351|ref|ZP_01262279.1| amino acid ABC transproter, permease protein [Vibrio alginolyticus 12G01] gi|262392785|ref|YP_003284639.1| amino acid ABC transporter permease [Vibrio sp. Ex25] gi|269965280|ref|ZP_06179401.1| amino acid ABC transproter, permease protein [Vibrio alginolyticus 40B] gi|91188111|gb|EAS74415.1| amino acid ABC transproter, permease protein [Vibrio alginolyticus 12G01] gi|262336379|gb|ACY50174.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25] gi|269830081|gb|EEZ84309.1| amino acid ABC transproter, permease protein [Vibrio alginolyticus 40B] Length = 223 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 80/219 (36%), Positives = 130/219 (59%), Gaps = 9/219 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN +++ P LL + T+ +A V SLI+ +A IR+F ++ + Y+ F Sbjct: 5 FNYMLELLPILL-KYLGTTMEMATWGLVFSLILSVILANIRVF-KLPVLDQLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQLF+++YGLP I GI D+F A +I LTL+F+AY++E IR++II I + Sbjct: 63 RGTPLLVQLFLLYYGLPQIFPLMVGI--DAFSAAVIGLTLHFAAYMAESIRAAIIGIDRS 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G+T Q +R +ILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 121 QMEASLSVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQM 180 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S++++ + +A +Y + +QI E+ + + Sbjct: 181 EASSSFRFFEAFLAVALIYWGVVVILTRVQIWAEAKLNK 219 >gi|284048020|ref|YP_003398359.1| polar amino acid ABC transporter, inner membrane subunit [Acidaminococcus fermentans DSM 20731] gi|283952241|gb|ADB47044.1| polar amino acid ABC transporter, inner membrane subunit [Acidaminococcus fermentans DSM 20731] Length = 218 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 76/199 (38%), Positives = 120/199 (60%), Gaps = 3/199 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++ +S P LL A +T+ I S + L IG +++IR+ + ++ YV Sbjct: 3 FEIMKESLP-LLLAGAGITVEITAASVGLGLAIGVVVSLIRLC-GIRALRVLGDIYVTFL 60 Query: 66 RGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQ+F++++ LP I D++VA I + ++N AY++EI R I SI KGQ +A Sbjct: 61 RGTPLLVQIFLVYFALPALIHHRVDAYVAAISACSINSGAYVAEIFRGGIESIDKGQMEA 120 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++G+T QT+RHIILPQ PL +EFI++LK +S+ S I E+ + Q I++ Sbjct: 121 GRSLGMTWWQTMRHIILPQAFKRIIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQLIIAR 180 Query: 185 TYQPLIIYCELAFVYLILT 203 TY I+ +A +YL++T Sbjct: 181 TYASFEIWLSVAIIYLVMT 199 >gi|269962689|ref|ZP_06177034.1| amino acid ABC transproter, permease protein [Vibrio harveyi 1DA3] gi|269832612|gb|EEZ86726.1| amino acid ABC transproter, permease protein [Vibrio harveyi 1DA3] Length = 223 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 80/219 (36%), Positives = 130/219 (59%), Gaps = 9/219 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN +++ P LL + T+ +A V SLI+ +A IR+F ++ + Y+ F Sbjct: 5 FNYMLELLPILL-KYLGTTMEMATWGLVFSLILAVILANIRVF-KLPVLDQLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQLF+++YGLP I GI D+F A +I LTL+F+AY++E IR++II I + Sbjct: 63 RGTPLLVQLFLLYYGLPQIFPFMVGI--DAFSAAVIGLTLHFAAYMAESIRAAIIGIDRS 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G+T Q +R +ILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 121 QMEASLSVGMTTPQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQM 180 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S++++ + +A +Y + +QI E+ + + Sbjct: 181 EASSSFRFFEAFLAVALIYWGVVVILTRVQIWAEAKLNK 219 >gi|328471236|gb|EGF42138.1| amino acid ABC transporter permease [Vibrio parahaemolyticus 10329] Length = 223 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 80/219 (36%), Positives = 130/219 (59%), Gaps = 9/219 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN +++ P LL + T+ +A V SLI+ +A IR+F ++ + Y+ F Sbjct: 5 FNYMLELLPILL-KYLGTTMEMATWGLVFSLILAVILANIRVF-KLPVLDQLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQLF+++YGLP I GI D+F A +I LTL+F+AY++E IR++II I + Sbjct: 63 RGTPLLVQLFLLYYGLPQIFPVMVGI--DAFSAAVIGLTLHFAAYMAESIRAAIIGIDRS 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G+T Q +R +ILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 121 QMEASLSVGMTTPQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQM 180 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S++++ + +A +Y + +QI E+ + + Sbjct: 181 EASSSFRFFEAFLAVALIYWGVVVILTRVQIWAEAKLNK 219 >gi|260463585|ref|ZP_05811784.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Mesorhizobium opportunistum WSM2075] gi|259030676|gb|EEW31953.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Mesorhizobium opportunistum WSM2075] Length = 242 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 68/191 (35%), Positives = 118/191 (61%), Gaps = 2/191 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL A V+T+ IA + ++++I+G A+ R++ + + YV IFRGT LV Sbjct: 30 LPGLLQGA-VLTIEIAILGSLLAVIMGVLAALARLY-GPAPLRWLATVYVEIFRGTSALV 87 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF +F+ LP G+ D+F+ +++L LN AY SE++R +I+S+ +GQW+ A+ ++R Sbjct: 88 QLFWLFFVLPQFGVTLDAFLVAVVALGLNVGAYGSEVVRGAILSVGRGQWEGCTALNMSR 147 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 Q +R +ILPQ P + FI +LKSTS+ S IT+ ++ AQ++ T++ + I+ Sbjct: 148 AQMLRRVILPQAFVAMIPPWGNLFIELLKSTSLVSLITLSDLAFKAQQMNQNTFKTIPIF 207 Query: 193 CELAFVYLILT 203 + +YL+++ Sbjct: 208 TLVLLMYLVMS 218 >gi|24379640|ref|NP_721595.1| putative amino acid ABC transporter, permease protein [Streptococcus mutans UA159] gi|24377593|gb|AAN58901.1|AE014958_5 putative amino acid ABC transporter, permease protein [Streptococcus mutans UA159] Length = 217 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 78/213 (36%), Positives = 128/213 (60%), Gaps = 2/213 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LII S +L I TL I+ +SF+ ++G FI+ +R+ + + SL Y+ I Sbjct: 5 FHLIIKSLSFVL-TGIPYTLGISVLSFLTGCLLGIFISFLRMSQNSWLRSL-ARIYISIM 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG P+LV LFV+++GLP+ + + + I + SAYISEI R+SI ++ KGQW+A+ Sbjct: 63 RGVPMLVVLFVLYFGLPYFEVQLPALLCAYIGFSAVSSAYISEIFRASISAVDKGQWEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL ++ IILPQ + PL + + +LKS+S+A+ IT+P+IFQ A+ I Sbjct: 123 GALGLPMTSILKSIILPQAFRIAIAPLGNVMLDMLKSSSLAAMITVPDIFQNAKIIGGRE 182 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Y + +Y +AF+Y +L + Q +E+ ++ Sbjct: 183 YDYMSMYILIAFIYWLLCFLFEMFQNHLEAKLS 215 >gi|327400780|ref|YP_004341619.1| polar amino acid ABC transporter inner membrane subunit [Archaeoglobus veneficus SNP6] gi|327316288|gb|AEA46904.1| polar amino acid ABC transporter, inner membrane subunit [Archaeoglobus veneficus SNP6] Length = 224 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 76/197 (38%), Positives = 117/197 (59%), Gaps = 2/197 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L + P L Y A V T+ + IS ++ LI G + + RI + I L YV R Sbjct: 10 ELFVKILPNLAYGAFV-TVKLTSISTLLGLIFGTILGLGRISKNPLIFGLSTS-YVEFIR 67 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+ +++YGLP +GI A I++LTLN AYI+EIIR+ I S+PKGQ +A+ Sbjct: 68 GTPLLVQIMIVYYGLPAVGINLPPEPAGILALTLNSGAYIAEIIRAGIQSVPKGQMEAAR 127 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G++ Q +R+++ PQ L +EFI++LK +S+ S I I E+ + ++I STT+ Sbjct: 128 SLGMSYFQAMRYVVFPQAFRNILPALGNEFIALLKDSSLLSVIAIAELTRVGKQIYSTTF 187 Query: 187 QPLIIYCELAFVYLILT 203 +A YL++T Sbjct: 188 NAWTPLLGVALFYLMMT 204 >gi|153830814|ref|ZP_01983481.1| amino acid ABC transporter, permease protein [Vibrio cholerae 623-39] gi|148873698|gb|EDL71833.1| amino acid ABC transporter, permease protein [Vibrio cholerae 623-39] Length = 223 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 75/197 (38%), Positives = 122/197 (61%), Gaps = 5/197 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ +++ P LL + TL +A V +LI+ F+A IR+F ++ + Y+ F Sbjct: 5 FHYMLELLPILL-KYLGTTLEMASWGLVFALILALFLANIRVF-KVPVLDPLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP + + D+F A +I LTL+F+AY++E IR++II I + Q Sbjct: 63 RGTPLLVQLFLLYYGLPQVFSLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQM 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G+T Q +R IILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 123 EASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEA 182 Query: 183 STTYQPLIIYCELAFVY 199 S++++ + +A +Y Sbjct: 183 SSSFRFFEAFLAVALIY 199 >gi|153802492|ref|ZP_01957078.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-3] gi|124121962|gb|EAY40705.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-3] Length = 220 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 76/197 (38%), Positives = 122/197 (61%), Gaps = 5/197 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ +++ P LL + TL +A V +LI+ F+A IR+F ++ + Y+ F Sbjct: 5 FHYMLELLPILL-KYLGTTLEMASWGLVFALILALFLANIRVF-KVPVLDPLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP I + D+F A +I LTL+F+AY++E IR++II I + Q Sbjct: 63 RGTPLLVQLFLLYYGLPQIFPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQM 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G+T Q +R IILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 123 EASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEA 182 Query: 183 STTYQPLIIYCELAFVY 199 S++++ + +A +Y Sbjct: 183 SSSFRFFEAFLAVALIY 199 >gi|260774979|ref|ZP_05883879.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] gi|260609069|gb|EEX35228.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] Length = 223 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 129/217 (59%), Gaps = 5/217 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN +++ P LL + T+ +A V SLI+ +A IR+F ++ + Y+ F Sbjct: 5 FNYMLNLMPILL-KYLGTTMEMATWGLVFSLILAVILANIRVF-RVPVLDQLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP I + D+F A +I LTL+F+AY++E IR++II I + Q Sbjct: 63 RGTPLLVQLFLLYYGLPQIFPFLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQM 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G+T Q +R +ILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 123 EASLSVGMTTTQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEA 182 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S++++ + +A +Y + +QI E+ + + Sbjct: 183 SSSFRFFEAFLAVALIYWGVVVILTRVQIWAEAKLNK 219 >gi|317048137|ref|YP_004115785.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316949754|gb|ADU69229.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 249 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 72/198 (36%), Positives = 116/198 (58%), Gaps = 1/198 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ V T+ + L++G +A R+ + I+ I Y+W+FRGTPLLVQL + Sbjct: 19 IFMGAVNTVLLTLAGMAGGLVLGILLAFARLS-PWSWINQIARAYIWVFRGTPLLVQLII 77 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 I+ GLP IGI F A+++ L LN +AY++EIIR + ++PKGQ +A+ A+G Sbjct: 78 IYTGLPQIGIRFTVIEAVVMGLVLNEAAYLAEIIRGGVQALPKGQINAAKALGFNHLNVA 137 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 R++I PQT+ L + F +LK+TS+AS I++ E+ + Q ++ + L ++ A Sbjct: 138 RYVIFPQTMRLILPSLGNSFNGLLKTTSIASVISVEELLRRTQILMQEQFMVLELFMVAA 197 Query: 197 FVYLILTSFCYIIQIKIE 214 YL+LT+ IQ KIE Sbjct: 198 TYYLLLTTLWDFIQRKIE 215 >gi|228477514|ref|ZP_04062150.1| L-cystine transport system permease protein TcyB [Streptococcus salivarius SK126] gi|228250949|gb|EEK10137.1| L-cystine transport system permease protein TcyB [Streptococcus salivarius SK126] Length = 217 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 129/215 (60%), Gaps = 2/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LI+ S P +L + + TL I+ +SF++ + +A +R+ + Y+ I Sbjct: 5 FSLILKSIPYVL-SGLPYTLGISLLSFMVGNVFAIILAFMRMS-QKPWLKYPARVYISIM 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG P+LV LF++++GLP++G+ + + I + +AY++EI RSSI ++ KGQW+A+ Sbjct: 63 RGVPMLVVLFILYFGLPYVGVQMPALLCAFIGFSCVSAAYMAEIFRSSIAAVDKGQWEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++GL +K IR IILPQ + + PL + I ++KS+S+A+ IT+P+IFQ A+ I Sbjct: 123 RSLGLPQKSIIRRIILPQAMRIAVAPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGRE 182 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y + +Y +A +Y L+ ++Q +E + + Sbjct: 183 YDYMSMYILIALIYWTLSFTFELLQGYLEKRLATY 217 >gi|15640041|ref|NP_062593.1| amino acid ABC transproter, permease protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591472|ref|ZP_01678745.1| amino acid ABC transporter, permease protein [Vibrio cholerae 2740-80] gi|121730358|ref|ZP_01682715.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52] gi|147675477|ref|YP_001218403.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|153212968|ref|ZP_01948562.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587] gi|153819843|ref|ZP_01972510.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC 8457] gi|227080246|ref|YP_002808797.1| amino acid ABC transproter, permease protein [Vibrio cholerae M66-2] gi|229508295|ref|ZP_04397799.1| amino acid ABC transporter permease protein [Vibrio cholerae BX 330286] gi|229508866|ref|ZP_04398357.1| amino acid ABC transporter permease protein [Vibrio cholerae B33] gi|229515951|ref|ZP_04405408.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA 21] gi|229517137|ref|ZP_04406583.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9] gi|229520182|ref|ZP_04409609.1| amino acid ABC transporter permease protein [Vibrio cholerae TM 11079-80] gi|229530204|ref|ZP_04419593.1| amino acid ABC transporter permease protein [Vibrio cholerae 12129(1)] gi|229606569|ref|YP_002877217.1| amino acid ABC transporter permease protein [Vibrio cholerae MJ-1236] gi|254291130|ref|ZP_04961927.1| amino acid ABC transporter, permease protein [Vibrio cholerae AM-19226] gi|254851574|ref|ZP_05240924.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255746808|ref|ZP_05420754.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS 101] gi|262167098|ref|ZP_06034813.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27] gi|297581956|ref|ZP_06943876.1| amino acid ABC transporter [Vibrio cholerae RC385] gi|298501195|ref|ZP_07010994.1| amino acid ABC transporter [Vibrio cholerae MAK 757] gi|9654400|gb|AAF93187.1| amino acid ABC transproter, permease protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546674|gb|EAX56856.1| amino acid ABC transporter, permease protein [Vibrio cholerae 2740-80] gi|121627889|gb|EAX60471.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52] gi|124116194|gb|EAY35014.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587] gi|126509604|gb|EAZ72198.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC 8457] gi|146317360|gb|ABQ21899.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|150422975|gb|EDN14925.1| amino acid ABC transporter, permease protein [Vibrio cholerae AM-19226] gi|227008134|gb|ACP04346.1| amino acid ABC transproter, permease protein [Vibrio cholerae M66-2] gi|227011988|gb|ACP08198.1| amino acid ABC transproter, permease protein [Vibrio cholerae O395] gi|229332337|gb|EEN97824.1| amino acid ABC transporter permease protein [Vibrio cholerae 12129(1)] gi|229342776|gb|EEO07767.1| amino acid ABC transporter permease protein [Vibrio cholerae TM 11079-80] gi|229346200|gb|EEO11172.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9] gi|229347051|gb|EEO12013.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA 21] gi|229354141|gb|EEO19073.1| amino acid ABC transporter permease protein [Vibrio cholerae B33] gi|229354568|gb|EEO19490.1| amino acid ABC transporter permease protein [Vibrio cholerae BX 330286] gi|229369224|gb|ACQ59647.1| amino acid ABC transporter permease protein [Vibrio cholerae MJ-1236] gi|254847279|gb|EET25693.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255735565|gb|EET90964.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS 101] gi|262024484|gb|EEY43170.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27] gi|297533823|gb|EFH72664.1| amino acid ABC transporter [Vibrio cholerae RC385] gi|297540067|gb|EFH76129.1| amino acid ABC transporter [Vibrio cholerae MAK 757] gi|327482922|gb|AEA77329.1| Amino acid ABC transporter, permease protein [Vibrio cholerae LMA3894-4] Length = 223 Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 79/221 (35%), Positives = 131/221 (59%), Gaps = 9/221 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ +++ P LL + TL +A V +LI+ F+A IR+F ++ + Y+ F Sbjct: 5 FHYMLELLPILL-KYLGTTLEMASWGLVFALILALFLANIRVF-KVPVLDPLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP + + D+F A +I LTL+F+AY++E IR++II I + Q Sbjct: 63 RGTPLLVQLFLLYYGLPQVFPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQM 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G+T Q +R IILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 123 EASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEA 182 Query: 183 STTYQPLIIYCELAFVY----LILTSFCYIIQIKIESSVTQ 219 S++++ + +A +Y L+LT + K+ + + Sbjct: 183 SSSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKLNKAYAR 223 >gi|21264490|sp|P52625|PATM_VIBHA RecName: Full=Probable amino-acid ABC transporter permease protein patM gi|15080757|gb|AAA78255.2| membrane protein [Vibrio harveyi] Length = 223 Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 80/219 (36%), Positives = 130/219 (59%), Gaps = 9/219 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN +++ P LL + T+ +A V SLI+ +A IR+F ++ + Y+ F Sbjct: 5 FNYMLELLPILL-KYLGTTMEMATWGLVFSLILSVILANIRVF-KLPVLDQLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQLF+++YGLP I GI D+F A +I LTL+F+AY++E IR++II I + Sbjct: 63 RGTPLLVQLFLLYYGLPQIFPFMVGI--DAFSAAVIGLTLHFAAYMAESIRAAIIGIDRS 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G+T Q +R +ILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 121 QMEASLSVGMTTTQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQM 180 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S++++ + +A +Y + +QI E+ + + Sbjct: 181 EASSSFRFFEAFLAVALIYWGVVVILTRVQIWAEAKLNK 219 >gi|308067558|ref|YP_003869163.1| amino acid ABC transporter permease [Paenibacillus polymyxa E681] gi|305856837|gb|ADM68625.1| Hypothetical amino-acid ABC transporter permease protein [Paenibacillus polymyxa E681] Length = 215 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 77/217 (35%), Positives = 128/217 (58%), Gaps = 8/217 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 L+ ++ P LL A TL I +S LIIG +AV R+ + + + YV I Sbjct: 2 LELMWENVPFLLKGA-YYTLYITIVSMFFGLIIGLVVAVARLK-GNRPVRWLARMYVSII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTP+LVQ+ VI+YGL GI F S A ++L++N AY+SE R +I+++P+GQ +A+ Sbjct: 60 RGTPVLVQIAVIYYGLDDYGISFGSLTAACLALSINTGAYLSETFRGAILAVPQGQTEAA 119 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST- 184 YA G++ QT+ IILPQ + + P+ + F+ +LK TS+ S I + E+ + AQ + + Sbjct: 120 YATGMSPGQTMWRIILPQAVRIAIAPMGNTFVGMLKETSLVSVIGVSELMRQAQLLQAQY 179 Query: 185 -TYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQ 219 Y P ++ E+ +Y I++ F I++ ++E + + Sbjct: 180 LLYMPFLL--EIGLMYWIMSIGFSAILE-RVEKRLAR 213 >gi|156972775|ref|YP_001443682.1| ABC amino acid transporter permease component [Vibrio harveyi ATCC BAA-1116] gi|156524369|gb|ABU69455.1| hypothetical protein VIBHAR_00440 [Vibrio harveyi ATCC BAA-1116] Length = 223 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 80/219 (36%), Positives = 130/219 (59%), Gaps = 9/219 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN +++ P LL + T+ +A V SLI+ +A IR+F ++ + Y+ F Sbjct: 5 FNYMLELLPILL-KYLGTTMEMATWGLVFSLILSVILANIRVF-KLPVLDQLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQLF+++YGLP I GI D+F A +I LTL+F+AY++E IR++II I + Sbjct: 63 RGTPLLVQLFLLYYGLPQIFPFIVGI--DAFSAAVIGLTLHFAAYMAESIRAAIIGIDRS 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G+T Q +R +ILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 121 QMEASLSVGMTTPQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQM 180 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S++++ + +A +Y + +QI E+ + + Sbjct: 181 EASSSFRFFEAFLAVALIYWGVVVILTRVQIWAEAKLNK 219 >gi|157363724|ref|YP_001470491.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga lettingae TMO] gi|157314328|gb|ABV33427.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga lettingae TMO] Length = 202 Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 71/197 (36%), Positives = 115/197 (58%), Gaps = 3/197 (1%) Query: 33 VISLIIGFFIAVIRIF---FSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+ L +G +AV F + + L+ FY I R PLLV L +IFYGLP IGI D Sbjct: 3 VLGLAVGLIVAVPVSFSQIYGNRAARLLSSFYEKILRSIPLLVLLMLIFYGLPEIGIRLD 62 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 F+A ++ L L SAY S+I R +I+S+ KGQ A+ +IG+T+ Q R+I+ PQ + S Sbjct: 63 PFLACVLGLGLRSSAYQSQIFRGAILSVGKGQTLAAMSIGMTKIQIFRYIVFPQALRFSI 122 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYII 209 P ++E +LK +S+A + + E+ + I+STTY+P++I+ A +YLI+T + Sbjct: 123 APWTNELTIVLKDSSMAYALGVVELLRQGSYIISTTYEPMVIFITCAVIYLIMTLLANRV 182 Query: 210 QIKIESSVTQHTYSVDK 226 + +E + + + + Sbjct: 183 MMFLERKLQVPGFEIKE 199 >gi|330821184|ref|YP_004350046.1| hypothetical protein bgla_2g20990 [Burkholderia gladioli BSR3] gi|327373179|gb|AEA64534.1| hypothetical protein bgla_2g20990 [Burkholderia gladioli BSR3] Length = 238 Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 127/211 (60%), Gaps = 2/211 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN I P LL AA++ T+ +A ++ + + G +A++R + + ++ Y+W+F Sbjct: 5 FNQIWPYLPVLLKAALL-TIFLAVVTQCLGTVGGLALALMR-GARNPLPRVVAFVYIWVF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTP+L+ LF ++Y P +G+ ++ A I++++++ +AY +EIIR+ I ++P+GQ +A+ Sbjct: 63 RGTPVLLHLFFVYYAAPLVGLRLEALPAAIVAMSMSSAAYNAEIIRAGIQAVPRGQVEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G+ RH++LPQ P FIS K+TS+AS IT+PE+ AQ I S+T Sbjct: 123 QALGMGWPGIHRHVVLPQAARIVLPPYVGNFISHTKNTSLASVITVPELMLQAQTIYSST 182 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 Y+ + +YL +T+ Q+++E S Sbjct: 183 YRAVETLTIAGAIYLGITTVLTFAQLRLERS 213 >gi|146317962|ref|YP_001197674.1| amino acid ABC transporter permease [Streptococcus suis 05ZYH33] gi|146320149|ref|YP_001199860.1| amino acid ABC transporter permease [Streptococcus suis 98HAH33] gi|253751185|ref|YP_003024326.1| transport system membrane protein [Streptococcus suis SC84] gi|253753086|ref|YP_003026226.1| transport system membrane protein [Streptococcus suis P1/7] gi|253754908|ref|YP_003028048.1| transport system membrane protein [Streptococcus suis BM407] gi|145688768|gb|ABP89274.1| ABC-type amino acid transport system, permease component [Streptococcus suis 05ZYH33] gi|145690955|gb|ABP91460.1| ABC-type amino acid transport system, permease component [Streptococcus suis 98HAH33] gi|251815474|emb|CAZ51052.1| transport system membrane protein [Streptococcus suis SC84] gi|251817372|emb|CAZ55108.1| transport system membrane protein [Streptococcus suis BM407] gi|251819331|emb|CAR44693.1| transport system membrane protein [Streptococcus suis P1/7] gi|292557745|gb|ADE30746.1| Amino acid ABC transporter, permease protein [Streptococcus suis GZ1] gi|319757454|gb|ADV69396.1| ABC-type amino acid transport system, permease component [Streptococcus suis JS14] Length = 223 Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 79/225 (35%), Positives = 130/225 (57%), Gaps = 7/225 (3%) Query: 1 MKYEW---FNLII--DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS 55 M W FN I ++ PQ+L + TL ++ I F + GFF+A++R+ + Sbjct: 1 MDINWQAVFNADIAREAIPQIL-EGLPYTLSLSLIGFALGTFCGFFVALMRMSKFGPLRW 59 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 L M ++ + RG PL+V LF I++GLP +G+ D+ A II+ T SAYISEIIR+S+ Sbjct: 60 LAMA-HISLMRGIPLMVLLFFIYFGLPFMGLQLDAISASIIAFTSMSSAYISEIIRASLS 118 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +I KGQW+A+ ++GL R II+PQ + PLS+ + ++KSTS+ + IT+PEIF Sbjct: 119 AIDKGQWEAARSLGLRTNVIHRKIIIPQAFRIALPPLSNVLLDMVKSTSLTAMITVPEIF 178 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 A+ + + +Y +A +Y ++ + Q+K+E + + Sbjct: 179 NKAKIVGGAKSDYMTVYICVALIYWVICTLYAFGQLKLEKRLATY 223 >gi|187934602|ref|YP_001885296.1| glutamine ABC transporter permease/substrate-binding protein [Clostridium botulinum B str. Eklund 17B] gi|187722755|gb|ACD23976.1| glutamine ABC transporter, permease/substrate-binding protein [Clostridium botulinum B str. Eklund 17B] Length = 213 Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 81/217 (37%), Positives = 126/217 (58%), Gaps = 15/217 (6%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVW 63 N I+ PQ+L + VTL + ++ ++S+ +G +A+ R + I+ L + YV Sbjct: 1 MNYILSLMPQIL-EGLKVTLEVFVLTLILSIPLGIVVALAR---TSKILMLRKLTGIYVL 56 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I RGTPLL+Q+ VIF+GLP +GI FD F A I++ LN++AY EI RS IISI KGQ++ Sbjct: 57 IMRGTPLLLQIVVIFFGLPTMGITFDRFTAAILAFVLNYAAYFGEIFRSGIISIDKGQYE 116 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +GLT K T IILPQ I P+++E +++K TS+ I + E+ + A +I S Sbjct: 117 AAEMLGLTSKDTFFRIILPQAIKRVIPPVANEITTLIKDTSLVYIIGLDELLKIA-KIAS 175 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ + LIL Y++ I I S + + Sbjct: 176 NR--------DVTLIPLILAGAVYLVVIGILSKLLEK 204 >gi|254507308|ref|ZP_05119444.1| amino acid ABC transproter, permease protein [Vibrio parahaemolyticus 16] gi|219549768|gb|EED26757.1| amino acid ABC transproter, permease protein [Vibrio parahaemolyticus 16] Length = 223 Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 77/217 (35%), Positives = 129/217 (59%), Gaps = 5/217 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN +++ P LL + T+ +A + SLI+ +A IR+F ++ + Y+ F Sbjct: 5 FNYMLELMPILL-KYLGTTMEMAVWGLIFSLILSVILANIRVF-KVPVLDQLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP I + D+F A +I LTL+F+AY++E IR++II I + Q Sbjct: 63 RGTPLLVQLFLLYYGLPQIFPWMVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQM 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G+T Q +R +ILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 123 EASLSVGMTTTQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEA 182 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S++++ + +A +Y + +QI E+ + + Sbjct: 183 SSSFRFFEAFLAVALIYWGVVVILTRVQIWAEAKLNK 219 >gi|320530705|ref|ZP_08031749.1| ABC transporter, permease protein [Selenomonas artemidis F0399] gi|320136992|gb|EFW28930.1| ABC transporter, permease protein [Selenomonas artemidis F0399] Length = 227 Score = 130 bits (328), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 126/207 (60%), Gaps = 6/207 (2%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L+ VTL I C++ +SL +GFF+A+ R+ S I+ ++ FY+W+ RGTPL++QL Sbjct: 23 LMLEGSTVTLEIFCVTLALSLPLGFFVALGRLSRS-RILGRLIDFYIWVMRGTPLMLQLL 81 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +++ LP IGI A ++ LN++AY +EI R+ I ++P+GQ++A+ +G++ Sbjct: 82 FVYFALPMIGIKLSDLSAAFLAFVLNYAAYFAEIFRAGIQAVPRGQYEAARVLGMSYPLA 141 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYC 193 +R IILPQ + + P+S+E I+++K TS+ + + ++ + A+ IV + PL+I Sbjct: 142 LRRIILPQVLRITLPPVSNETINLVKDTSLVYILAMNDLLRVARTIVQREFDMTPLVIAG 201 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQH 220 AF + +F + + K+E+ ++ Sbjct: 202 --AFYLAMTAAFTWGFK-KLEAHYGRY 225 >gi|313895906|ref|ZP_07829460.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312975331|gb|EFR40792.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 227 Score = 130 bits (328), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 63/178 (35%), Positives = 113/178 (63%), Gaps = 3/178 (1%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L+ VTL I C++ +SL +GFF+A+ R+ S I+ ++ FY+W+ RGTPL++QL Sbjct: 23 LMLEGSTVTLEIFCVTLALSLPLGFFVALGRLSRS-RILGRLIDFYIWVMRGTPLMLQLL 81 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +++ LP IGI A ++ LN++AY +EI R+ I ++P+GQ++A+ +G++ Sbjct: 82 FVYFALPMIGIKLSDLSAAFLAFVLNYAAYFAEIFRAGIQAVPRGQYEAARVLGMSYPLA 141 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLII 191 +R IILPQ + + P+S+E I+++K TS+ + + ++ + A+ IV + PL+I Sbjct: 142 LRRIILPQVLRITLPPVSNETINLVKDTSLVYILAMNDLLRVARTIVQREFDMTPLVI 199 >gi|163792483|ref|ZP_02186460.1| hypothetical protein BAL199_16588 [alpha proteobacterium BAL199] gi|159182188|gb|EDP66697.1| hypothetical protein BAL199_16588 [alpha proteobacterium BAL199] Length = 254 Score = 130 bits (328), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 85/207 (41%), Positives = 120/207 (57%), Gaps = 17/207 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YV 62 F L + FP LL A I +TL +A +S L IGFF+AV+ + I + F YV Sbjct: 14 FELFAEYFPALL-AGIPMTLKLAGLS----LFIGFFLAVVLAVLRTSGIRPLEAFVRSYV 68 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSS 113 ++FRGTPLLVQ+F+I+YG + +SF+ II+LTLN AY SEIIR Sbjct: 69 YVFRGTPLLVQIFLIYYGTGQFDFIKESFLWPVLREAYWCAIIALTLNTGAYTSEIIRGG 128 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I S+P GQ +A+ A G+ R ++ PQ I + +E I ++KSTS+AST+T+ E Sbjct: 129 IESVPWGQVEAAKACGMNVWLRFRRVVFPQAIRQALPGYGNEIILMVKSTSLASTVTLLE 188 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYL 200 I A++IVS TY PL ++ +YL Sbjct: 189 ITGIARKIVSQTYAPLELFIMAGAIYL 215 >gi|323496925|ref|ZP_08101953.1| amino acid ABC transporter permease protein [Vibrio sinaloensis DSM 21326] gi|323317999|gb|EGA70982.1| amino acid ABC transporter permease protein [Vibrio sinaloensis DSM 21326] Length = 223 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 77/217 (35%), Positives = 129/217 (59%), Gaps = 5/217 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN +++ P LL + T+ +A + SLI+ +A IR+F ++ + Y+ F Sbjct: 5 FNYMMELMPILL-KYLGTTMEMATWGLIFSLILSVILANIRVF-KVPVLDQLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP I + D+F A +I LTL+F+AY++E IR++II I + Q Sbjct: 63 RGTPLLVQLFLLYYGLPQIFPWLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQM 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G+T Q +R +ILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 123 EASLSVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEA 182 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S++++ + +A +Y + +QI E+ + + Sbjct: 183 SSSFRFFEAFLAVALIYWGVVVVLTRVQIWAEAKLNK 219 >gi|108803349|ref|YP_643286.1| amino acid ABC transporter permease [Rubrobacter xylanophilus DSM 9941] gi|108764592|gb|ABG03474.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rubrobacter xylanophilus DSM 9941] Length = 242 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 81/225 (36%), Positives = 139/225 (61%), Gaps = 10/225 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y F +++++ P L + VTL +A ++ V+ +++G F+A+++I S ++SL Y+ Sbjct: 24 YLDFGVVLEN-PAPLLKGLAVTLSLAALAEVVGIVLGLFLALLKISRS-RLLSLPAQVYI 81 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDS-FVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 +FRGTPLLVQ+ +I++ +GI F S F A + +L+LN +AY++EI R+ I SI KGQ Sbjct: 82 DVFRGTPLLVQITIIYFTTAAVGIRFTSLFFAGLTALSLNSAAYVAEIFRAGIQSIDKGQ 141 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A A GL+ QT+R+II+PQ PL++EF++++K TS+ S I + E+ + A+ + Sbjct: 142 MEAGRASGLSYAQTMRYIIVPQAFRRVIPPLTNEFVTLIKDTSLVSVIGLAELLRAARVL 201 Query: 182 VSTTYQ--PLIIYCELAFVYL-ILTSFCYIIQIKIESSVTQHTYS 223 S T+ PLI A +YL + Y+ I +E + + T + Sbjct: 202 QSATFNGTPLI---AAALIYLAVCLPLIYLTNI-LERRLNRRTAA 242 >gi|90413735|ref|ZP_01221723.1| Putative amino acid ABC transporter, permease protein [Photobacterium profundum 3TCK] gi|90325204|gb|EAS41701.1| Putative amino acid ABC transporter, permease protein [Photobacterium profundum 3TCK] Length = 223 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/218 (35%), Positives = 131/218 (60%), Gaps = 9/218 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN ++ P +L + TL +A +LII +A++R++ +++ + Y+ F Sbjct: 5 FNYMLSLMP-ILMKYLGTTLSMAVWGLGFALIIAITLALVRVY-KLPVLNQLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP + +F D+F A +I L+L+F+AY++E IR++II + + Q Sbjct: 63 RGTPLLVQLFLLYYGLPQVFPIFIGLDAFSASVIGLSLHFAAYMAESIRAAIIGVDRSQR 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS AIG+T Q +R IILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 123 EASLAIGMTEMQAMRRIILPQATRIALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEA 182 Query: 183 STTYQPLIIYCELAFVY----LILTSFCYIIQIKIESS 216 S++++ + +AF+Y L+LT + K+ + Sbjct: 183 SSSFKFFEAFLAVAFIYWGLVLVLTQVQNWAEAKLNKA 220 >gi|145301209|ref|YP_001144050.1| ABC-type polar amino acid transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142853981|gb|ABO92302.1| ABC-type polar amino acid transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 222 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 76/200 (38%), Positives = 127/200 (63%), Gaps = 8/200 (4%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ +A FV++L++ +A++R+F I L M Y+ FRGTPLLVQLF+++YGLP Sbjct: 23 TMEMALWGFVLALVLSLTLAIVRVFRIPVIHWLAM-LYISFFRGTPLLVQLFLLYYGLPQ 81 Query: 84 IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 + VF D+F A I+ LTL+F+AY++E IR++I+ I K Q +A+ +IG++R Q +R II Sbjct: 82 LFPVFVGMDAFTAAIVGLTLHFAAYMAESIRAAILGIHKSQMEAALSIGMSRYQAMRRII 141 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY- 199 LPQ + L + FI ++KSTS+A T+ + EI AQ S++++ + +A VY Sbjct: 142 LPQAARIATPSLMNYFIDMIKSTSLAFTLGVAEIMGKAQMEASSSFKFFESFMAVALVYW 201 Query: 200 ---LILTSFCYIIQIKIESS 216 +I T +++++ + + Sbjct: 202 VVVIIFTRLQHLLEVHLNRA 221 >gi|261250641|ref|ZP_05943216.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP 102891] gi|260939210|gb|EEX95197.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP 102891] Length = 223 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 128/217 (58%), Gaps = 5/217 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN ++D P LL + T+ +A SLI+ +A IR+F ++ + Y+ F Sbjct: 5 FNYMLDLMPILL-KYLGTTMEMATWGLFFSLILSVILANIRVF-RIPVLDQLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP I + D+F A +I LTL+F+AY++E IR++II I + Q Sbjct: 63 RGTPLLVQLFLLYYGLPQIFPFLVGLDAFGAAVIGLTLHFAAYMAESIRAAIIGIDRSQM 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G+T Q +R +ILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 123 EASLSVGMTTPQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEA 182 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S++++ + +A +Y + +QI E+ + + Sbjct: 183 SSSFRFFEAFLAVALIYWGVVVILTRVQIWAEAKLNK 219 >gi|197333922|ref|YP_002154779.1| cystine transport system permease protein [Vibrio fischeri MJ11] gi|197315412|gb|ACH64859.1| cystine transport system permease protein [Vibrio fischeri MJ11] Length = 223 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 77/217 (35%), Positives = 128/217 (58%), Gaps = 5/217 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F +I+ P +L+ + T+ +A + SLI+ +A +R+F + + Y+ F Sbjct: 5 FTYMIELLP-ILFKYLGTTMEMALWGLLFSLILALVLANLRVF-KVPVFDQLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP + +F D+F A +I LTL+F+AY++E IR++II I + Q Sbjct: 63 RGTPLLVQLFLLYYGLPQVFPIFVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQM 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS +IG+T Q +R IILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 123 EASLSIGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEA 182 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S++++ + +A +Y + +QI E + + Sbjct: 183 SSSFKFFEAFLAVALIYWGVVVILTRVQIWAEEKLNK 219 >gi|251780837|ref|ZP_04823757.1| L-cystine transport system permease protein TcyB [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085152|gb|EES51042.1| L-cystine transport system permease protein TcyB [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 213 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/217 (36%), Positives = 125/217 (57%), Gaps = 15/217 (6%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVW 63 N I+ PQ+L + VTL + ++ ++S+ +G +A+ R F ++ + YV Sbjct: 1 MNYILSLMPQIL-EGLKVTLEVFVLTLILSIPLGIVVALARTSKFL---VLRKLTGIYVL 56 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I RGTPLL+Q+ VIF+GLP +GI FD F A I++ LN++AY EI RS IISI KGQ++ Sbjct: 57 IMRGTPLLLQIVVIFFGLPTMGITFDRFTAAILAFVLNYAAYFGEIFRSGIISIDKGQYE 116 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +GLT K T IILPQ I P+++E +++K TS+ I + E+ + A +I S Sbjct: 117 AAEMLGLTSKDTFFRIILPQAIKRVIPPVANEITTLIKDTSLVYIIGLDELLKIA-KIAS 175 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ + LIL Y++ I I S + + Sbjct: 176 NR--------DVTLIPLILAGAVYLVVIGILSKLLEK 204 >gi|313680185|ref|YP_004057924.1| amino acid ABC transporter membrane protein, paat family [Oceanithermus profundus DSM 14977] gi|313152900|gb|ADR36751.1| amino acid ABC transporter membrane protein, PAAT family [Oceanithermus profundus DSM 14977] Length = 275 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 74/211 (35%), Positives = 118/211 (55%), Gaps = 17/211 (8%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + +F L VT+ + IS V L +G F + R+ + + FYVW+ RGTP Sbjct: 46 VPNFAHNLRLGAEVTIKLTVISSVTGLFLGLFAGIARLS-KNPLFRWPAQFYVWVIRGTP 104 Query: 70 LLVQLFVIFY----------------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 LLVQ+ + G P I V + A I+L++N AY +E+IR+ Sbjct: 105 LLVQILFAYNALPFLLEPAWKYLQPLGAPPIQDVLTPYWAAFIALSVNVGAYNAEVIRAG 164 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I +I KGQW+A+ ++G+ Q +R+II+PQ I PL + I++LK +S+AS IT+ E Sbjct: 165 IQAIAKGQWEAAMSLGMRPFQVMRYIIVPQAIKIVVPPLVNNVIALLKDSSLASVITLLE 224 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 + QR++S T++P+ +Y +A +YLILT+ Sbjct: 225 LVHQGQRMISITFRPVEVYVAVAAIYLILTT 255 >gi|229524911|ref|ZP_04414316.1| amino acid ABC transporter permease protein [Vibrio cholerae bv. albensis VL426] gi|229338492|gb|EEO03509.1| amino acid ABC transporter permease protein [Vibrio cholerae bv. albensis VL426] Length = 223 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/221 (35%), Positives = 131/221 (59%), Gaps = 9/221 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ +++ P LL + TL +A V +LI+ F+A IR+F ++ + Y+ F Sbjct: 5 FHYMLELLPILL-KYLGTTLEMASWGLVFALILALFLANIRVF-KVPVLDPLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP + + D+F A +I LTL+F+AY++E IR++II I + Q Sbjct: 63 RGTPLLVQLFLLYYGLPQVFPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQM 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G+T Q +R IILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 123 EASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQIEA 182 Query: 183 STTYQPLIIYCELAFVY----LILTSFCYIIQIKIESSVTQ 219 S++++ + +A +Y L+LT + K+ + + Sbjct: 183 SSSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKLNKAYAR 223 >gi|154508367|ref|ZP_02044009.1| hypothetical protein ACTODO_00864 [Actinomyces odontolyticus ATCC 17982] gi|153798001|gb|EDN80421.1| hypothetical protein ACTODO_00864 [Actinomyces odontolyticus ATCC 17982] Length = 219 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/219 (36%), Positives = 120/219 (54%), Gaps = 2/219 (0%) Query: 6 FNL-IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 NL I+ + L A ++TL IA I V SL +G +A IR + + + I YV + Sbjct: 1 MNLDILARYAPLYVDAAILTLRIAAIGIVGSLAVGLLVAAIR-QYRIPVATQIAVAYVEL 59 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 R TPLLVQLF I++GLP +GI + I+ L AY++E +RS + SI QW++ Sbjct: 60 SRNTPLLVQLFFIYFGLPRVGIKWSGETCAIVGLIFLGGAYMAEALRSGLDSIATIQWES 119 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 S A+GLTR QT+RH+ LPQ I TS PL++ I ++K TSV S + +P++ A+ ++ Sbjct: 120 SAALGLTRTQTLRHVALPQAIATSVPPLAANVIFLIKETSVVSVVALPDLVYVAKDLIGM 179 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 +Y L YL++ I IE V + + Sbjct: 180 SYNTSEALILLVIAYLVILLPVSIAARLIEKKVRRGGFG 218 >gi|310778237|ref|YP_003966570.1| amino acid ABC transporter membrane protein, PAAT family [Ilyobacter polytropus DSM 2926] gi|309747560|gb|ADO82222.1| amino acid ABC transporter membrane protein, PAAT family [Ilyobacter polytropus DSM 2926] Length = 212 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 74/186 (39%), Positives = 117/186 (62%), Gaps = 6/186 (3%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV 92 V++L +G F+++ + S + + Y WIFRG+PLL+QLF ++YGLP +GI F Sbjct: 26 VLALPLGLFLSLGGVSKS-VFVRRGIALYTWIFRGSPLLLQLFFVYYGLPVMGITLTPFT 84 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 A ++ LN+SAY EI+R I SIPKGQ++AS +G+ +T+RHIILPQ + S L Sbjct: 85 AASLTFILNYSAYTCEILRGCIQSIPKGQYEASRVLGMNYFKTMRHIILPQALRMSLPAL 144 Query: 153 SSEFISILKSTSVASTITIPEIFQTAQRIVST--TYQPLIIYCELAFVYLILTSFCYIIQ 210 S+E ++++K T++ S+I + EI + ++ IV+ T P I+ C L +YL ++S +I Sbjct: 145 SNEAVNLVKDTALISSIGMAEILRNSKEIVARDFTIMPFIL-CGL--IYLAVSSIIILIF 201 Query: 211 IKIESS 216 K E Sbjct: 202 KKAEDK 207 >gi|126737006|ref|ZP_01752741.1| probable amino acid ABC transporter, permease protein [Roseobacter sp. SK209-2-6] gi|126721591|gb|EBA18294.1| probable amino acid ABC transporter, permease protein [Roseobacter sp. SK209-2-6] Length = 324 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 119/209 (56%), Gaps = 1/209 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F I P LL V TL ++ IS ++ + A ++ I+ I FY F Sbjct: 108 FGFIGKKLPYLLSQGAVTTLYVSAISITLAFVFALAGATAKLS-GIGILEGIGSFYTSYF 166 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+I+ GLP IG V D A I +L+L + AY++EI RS I S+P GQW+A+ Sbjct: 167 RGTPLLVQLFLIYLGLPQIGFVVDPVPAAIAALSLVYGAYMTEIFRSGIQSLPAGQWEAA 226 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL R T R +ILPQ + P ++FI++LK +S+ S + + ++ A+ + + Sbjct: 227 DALGLHRMVTFRKVILPQAMRVIIPPTGNQFIAMLKDSSLVSVVGVWDLMFLARTVGRSD 286 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIE 214 ++ L + + VY +++ ++Q +IE Sbjct: 287 FKILEMLITASIVYWLMSIVLELVQKRIE 315 >gi|160903093|ref|YP_001568674.1| polar amino acid ABC transporter, inner membrane subunit [Petrotoga mobilis SJ95] gi|160360737|gb|ABX32351.1| polar amino acid ABC transporter, inner membrane subunit [Petrotoga mobilis SJ95] Length = 223 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/200 (40%), Positives = 117/200 (58%), Gaps = 2/200 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E +II+S P LL +V TL + S ++ ++G I+ +++ + + LI Y Sbjct: 2 EDIQVIINSLPYLLKGTLV-TLELTFFSLILGFVVGVIISFGQLY-GNKFLQLIFLIYER 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 +FR PL+V LF+IFYGLP IGI D +A II L L SAY S+I R +I SI KGQ D Sbjct: 60 VFRSIPLIVVLFLIFYGLPAIGIRLDPLIASIIGLGLISSAYQSQIFRGAISSISKGQLD 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG+ + QT +II PQ I + +E +LK TSVA + + E+ + I+S Sbjct: 120 AAYSIGMNKIQTFIYIIFPQAIRIALSGWINEASVVLKDTSVAYALGVVELLRQGTYIIS 179 Query: 184 TTYQPLIIYCELAFVYLILT 203 T +PLI+Y +Y +LT Sbjct: 180 VTNRPLIVYLICGAIYFVLT 199 >gi|222153166|ref|YP_002562343.1| transport system membrane protein [Streptococcus uberis 0140J] gi|222113979|emb|CAR42274.1| transport system membrane protein [Streptococcus uberis 0140J] Length = 219 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/210 (33%), Positives = 130/210 (61%), Gaps = 5/210 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 MK+ FNL+ DS + + + T+ I+ +SF+ + +G +A++ I+ ++ Sbjct: 1 MKFIDFNLMKDSL-WFVLSGLPYTIGISALSFMTGVTLGILLAIMG-RSQHRILQKMVKV 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV I RG P++V LF++++G+P+ + + + I +L SAYISEI RSSI ++ G Sbjct: 59 YVSIMRGVPMIVVLFMLYFGMPYFNLQLPALLCAYIGFSLVSSAYISEIFRSSINAVDHG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A+G+++K+ I+ +ILPQ + PL + + ++KS+S+A+ IT+P+IFQ A+ Sbjct: 119 QWEAAQALGISKKRVIQKVILPQAFRIAIPPLGNVVVDMIKSSSLAAMITVPDIFQNAKI 178 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 + + + +Y +AF+Y +L CY+ + Sbjct: 179 VGGREWDYMSMYILVAFIYWVL---CYLFE 205 >gi|169334520|ref|ZP_02861713.1| hypothetical protein ANASTE_00923 [Anaerofustis stercorihominis DSM 17244] gi|169259237|gb|EDS73203.1| hypothetical protein ANASTE_00923 [Anaerofustis stercorihominis DSM 17244] Length = 217 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 77/214 (35%), Positives = 129/214 (60%), Gaps = 16/214 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L A V T+ + IS V+ +I+ IA + I + I+ I Y W+FRGTPLL+Q+ V Sbjct: 9 LAAGTVSTIELTLISIVLGMILALVIAFMSIG-RNKILKGIAWIYTWVFRGTPLLLQIMV 67 Query: 77 IFYGLP-----HIG--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +++ +P +G + F+ F A II+LTLN +AY SEI R+ I SI KGQ +A+ A+G Sbjct: 68 VYFAIPLMVKQMVGSPLNFEPFTAAIIALTLNTAAYTSEIFRAGIQSIDKGQMEAAKALG 127 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST---TY 186 +T Q + +I+PQT++ P ++EFI ILK TS+ STI + ++ + +++ ++ +Y Sbjct: 128 MTYSQAMFKVIIPQTVSRVIPPFANEFIMILKDTSLVSTIGMADLMRVSKQFAASGDWSY 187 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y +YL+LTS C ++ ++E +++ Sbjct: 188 -----YFVAGGIYLVLTSVCIVLFQRLEKKTSRY 216 >gi|322391487|ref|ZP_08064956.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus peroris ATCC 700780] gi|321145570|gb|EFX40962.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus peroris ATCC 700780] Length = 543 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/226 (35%), Positives = 129/226 (57%), Gaps = 11/226 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISLIM 58 ++ +++ QLL A +TL I+ I ++ LIIG I V R IF +I I+ Sbjct: 307 ILTENWQQLLRGA-GITLLISIIGTIVGLIIGLAIGVFRTAPQSENQFIFGIQKLIGWIL 365 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R I+++ Sbjct: 366 NVYIEIFRGTPMIVQAMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILAV 425 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G+T QT+R I+LPQ I +EF+ +K TSV + I++ E++ + Sbjct: 426 DKGQFEAATALGMTHNQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVVELYFS 485 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + + TYQ + +A +Y ILT I IE + TY+ Sbjct: 486 GNTVATQTYQYFQTFTIIAVIYFILTFTVTRILRYIEKRMDMDTYT 531 >gi|222080930|ref|YP_002540293.1| octopine ABC transporter [Agrobacterium radiobacter K84] gi|221725609|gb|ACM28698.1| octopine ABC transporter [Agrobacterium radiobacter K84] Length = 224 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 67/203 (33%), Positives = 126/203 (62%), Gaps = 1/203 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y I S+ L +++L ++ ++F ++IGF +A+ R I+S ++ Sbjct: 1 MHYALHYSQITSYLPYLIGGALLSLELSVLAFAGGMVIGFALAIAR-NEGGPILSRLVRA 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV F TP LVQ++VIF+GLP +G+VF F A++I +TLN AY++EI+R+ + S+ + Sbjct: 60 YVVFFTNTPQLVQIYVIFFGLPDLGVVFSPFAAVLIGMTLNAGAYLTEILRAGLASVHQE 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + DA+ +G++R Q++R++I+P + PLS+++I + TS+A+ + E+ A Sbjct: 120 ELDAAETLGMSRLQSLRYVIVPHVFRVAMPPLSNQYILMTLGTSMAAVFGVEELTGRAFN 179 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + STT++ + I+ +A +Y+++T Sbjct: 180 VNSTTFRSIEIFTTIAGLYVVIT 202 >gi|328950983|ref|YP_004368318.1| polar amino acid ABC transporter, inner membrane subunit [Marinithermus hydrothermalis DSM 14884] gi|328451307|gb|AEB12208.1| polar amino acid ABC transporter, inner membrane subunit [Marinithermus hydrothermalis DSM 14884] Length = 283 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 74/217 (34%), Positives = 125/217 (57%), Gaps = 21/217 (9%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + IS + LIIG + R+ + + FY+W+ RGTPLLVQ+ + GLP Sbjct: 68 VTLKLTVISSIAGLIIGLVAGISRLS-RNPLFRYPAAFYIWVIRGTPLLVQILFAYNGLP 126 Query: 83 -----------HIGI-----VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 +G+ + + A ++L N AY +E+IR+ I +I KGQW+A++ Sbjct: 127 FLLDPLWRPLEALGLPSIQDILVPYWAAFLALAFNVGAYNAEVIRAGIQAISKGQWEAAH 186 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ Q +R+I++PQ + PL + I++LK +S+A IT+ E+ QRI+S T+ Sbjct: 187 SLGLSPAQVMRYIVIPQAVRIVVPPLVNNVIALLKDSSLAMAITLLELVLAGQRIISATF 246 Query: 187 QPLIIYCELAFVYLILTS----FCYIIQIKIESSVTQ 219 +P+ IY +A VYLILT+ F ++ ++++S + Sbjct: 247 RPVEIYVAVAMVYLILTTVLTFFTNWLERRLQASGAR 283 >gi|239820275|ref|YP_002947460.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] gi|239805128|gb|ACS22194.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 241 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 116/191 (60%), Gaps = 1/191 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + + L++G +A+ R+ D + + HFY+W+FRGTPLLVQL +I+ GLP Sbjct: 26 TLWLTLAAIAGGLVVGCALALARLSRHDWLAA-PAHFYIWVFRGTPLLVQLIIIYTGLPQ 84 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ + ++ L LN +AY++E++R I S+P GQ +A+ A+G + Q++R+I++PQ Sbjct: 85 LGLKLSVVESALLGLILNEAAYLAEVVRGGIQSVPAGQTNAARAVGFSSAQSMRYIVMPQ 144 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + L + +LK+TS+ S I++ E+ + Q ++ + L ++ A YL++T Sbjct: 145 AMRLIIPTLGNSINGLLKTTSITSVISMEELLRRTQVLIQEKFMVLELFIVAAIYYLLMT 204 Query: 204 SFCYIIQIKIE 214 + +IQ +IE Sbjct: 205 TVWDVIQRRIE 215 >gi|222081595|ref|YP_002540959.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726274|gb|ACM29363.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 219 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 64/145 (44%), Positives = 100/145 (68%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FYVW RGTP L+Q+F+I++GLP GI FVA ++SL +N AY++EIIR + +IP+ Sbjct: 58 FYVWFVRGTPTLIQVFIIYFGLPAFGIKLSPFVAGVLSLGINSGAYVAEIIRGGLSAIPR 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +++ A+G + +T+R IILPQ +++E IS LK+TS+ STIT+ E+ AQ Sbjct: 118 GQTESALALGFSPSETMRSIILPQVSRIILPSITNEAISTLKNTSLLSTITVVELTLYAQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILTS 204 +++ T++P Y +A +YL+LT+ Sbjct: 178 TLIAATFRPFEFYITVAIIYLVLTT 202 >gi|221369815|ref|YP_002520911.1| Polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] gi|221162867|gb|ACM03838.1| Polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] Length = 219 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 61/145 (42%), Positives = 101/145 (69%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FY+W RGTP L+Q+F+I++GLP +G+ F A +I+L +N AY++EI+RS + +I + Sbjct: 58 FYIWFIRGTPALIQIFIIYFGLPQLGLRLSPFTAGVIALGINSGAYVAEIVRSGLSAIHR 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +++ A+G ++ QT+R I+LPQ +++E IS LK+TS+ STIT+ E+ AQ Sbjct: 118 GQTESALALGFSQSQTMRTIVLPQVFRIILPSITNEAISTLKNTSLLSTITVVELTLYAQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILTS 204 ++S T++P Y +A +YL+LT+ Sbjct: 178 TLISATFRPFDFYIAVAVIYLVLTT 202 >gi|253582767|ref|ZP_04859987.1| amino acid ABC transporter permease [Fusobacterium varium ATCC 27725] gi|251835343|gb|EES63884.1| amino acid ABC transporter permease [Fusobacterium varium ATCC 27725] Length = 208 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 123/200 (61%), Gaps = 6/200 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +T+ + ++ + SL +G +++ R+ +T +S I+ Y WIFRGTPLL+QLF ++Y Sbjct: 11 GMKLTVNLYVVTMLFSLPLGILLSLGRVS-KNTTLSNIIQVYTWIFRGTPLLLQLFFVYY 69 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP +GI F A ++ +N++AY EI R SI+ I GQ++A+ +G+ QT+ I Sbjct: 70 GLPVVGITLSPFAAASLTFVINYTAYFCEIFRGSILGIDPGQYEAAKVLGMKYWQTMIRI 129 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAF 197 I+PQ + T+ PLS+E IS++K TS+ S I + EI + ++ +V+ + P I C A Sbjct: 130 IIPQALITALPPLSNEAISLIKDTSLVSAIGMAEILRNSRELVTRDFSITPFFI-C--AV 186 Query: 198 VYLILTSFCYIIQIKIESSV 217 +YL L++ + K+E V Sbjct: 187 IYLGLSTIVVLFFKKMEKKV 206 >gi|126464227|ref|YP_001045340.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17029] gi|126106038|gb|ABN78568.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17029] Length = 219 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 61/145 (42%), Positives = 101/145 (69%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FY+W RGTP L+Q+F+I++GLP +G+ F A +I+L +N AY++EI+RS + +I + Sbjct: 58 FYIWFIRGTPALIQIFIIYFGLPQLGLRLSPFTAGVIALGINSGAYVAEIVRSGLSAIHR 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +++ A+G ++ QT+R I+LPQ +++E IS LK+TS+ STIT+ E+ AQ Sbjct: 118 GQTESALALGFSQSQTMRTIVLPQVFRIILPSITNEAISTLKNTSLLSTITVVELTLYAQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILTS 204 ++S T++P Y +A +YL+LT+ Sbjct: 178 TLISATFRPFDFYIAVAIIYLVLTT 202 >gi|257067018|ref|YP_003153274.1| polar amino acid ABC transporter, inner membrane subunit [Anaerococcus prevotii DSM 20548] gi|256798898|gb|ACV29553.1| polar amino acid ABC transporter, inner membrane subunit [Anaerococcus prevotii DSM 20548] Length = 521 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 77/204 (37%), Positives = 121/204 (59%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR-----------IFFSDTIISLIMHF 60 ++ L +V TL IA +S ++ ++G +AVIR ++ II+ I+ Sbjct: 288 TYSTLFLKGVVNTLIIAIVSTILGFLLGLLVAVIRGMEVKKTDNAFTYYLHKIINWILGA 347 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV IFRGTP++VQ +IFYGL + I + A I+ +++N AY+SE++R I SI K Sbjct: 348 YVEIFRGTPMMVQSVIIFYGLKQYFDIDLSTMFAAILIVSINTGAYLSEVVRGGINSIDK 407 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A AIG+T QT+ H+ILPQTI T + +EF+ +K TSV + I++ E+F ++ Sbjct: 408 GQFEACKAIGMTHFQTMVHVILPQTILTILPSIGNEFVINIKDTSVLNVISVTELFFMSK 467 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 + +TYQ Y A +Y +LT Sbjct: 468 SVAGSTYQYFPTYLITAVIYFVLT 491 >gi|77465748|ref|YP_355251.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|332560500|ref|ZP_08414818.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides WS8N] gi|77390166|gb|ABA81350.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|332274298|gb|EGJ19614.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides WS8N] Length = 219 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 61/145 (42%), Positives = 101/145 (69%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FY+W RGTP L+Q+F+I++GLP +G+ F A +I+L +N AY++EI+RS + +I + Sbjct: 58 FYIWFIRGTPALIQIFIIYFGLPQLGLRLSPFTAGVIALGINSGAYVAEIVRSGLSAIHR 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +++ A+G ++ QT+R I+LPQ +++E IS LK+TS+ STIT+ E+ AQ Sbjct: 118 GQTESALALGFSQSQTMRTIVLPQVFRIILPSITNEAISTLKNTSLLSTITVVELTLYAQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILTS 204 ++S T++P Y +A +YL+LT+ Sbjct: 178 TLISATFRPFDFYIAVAVIYLVLTT 202 >gi|18311075|ref|NP_563009.1| amino acid ABC transporter [Clostridium perfringens str. 13] gi|18145757|dbj|BAB81799.1| probable amino acid ABC transporter [Clostridium perfringens str. 13] Length = 502 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 126/212 (59%), Gaps = 5/212 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 +D P LL AI VT+ ++ ++ LI+G +A+IR++ ++ I Y+ FRGTP Sbjct: 291 LDLIPMLL-KAINVTISLSVFGMILGLIVGIALAMIRVY-KIPVLKQIAEVYISFFRGTP 348 Query: 70 LLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 LLVQLF++++G+P + +F A +I L LN SAYI+EI+RSSI +I KGQ +A Sbjct: 349 LLVQLFLLYFGVPQVIPSLQNMSAFTAALIGLGLNASAYIAEILRSSIDAIDKGQMEACL 408 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+T Q ++ ++LPQ + PL + F+ +K +S+A T+ + E+ AQ + +Y Sbjct: 409 SLGMTMAQALKRVVLPQAFRIAIPPLGNIFVDTVKGSSLAFTLGVVELLAKAQMEAAASY 468 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 + Y +A +Y I+ F +Q +E ++ Sbjct: 469 KFFESYVVVAIMYWIIIGFFNYLQKILEKKLS 500 >gi|227517724|ref|ZP_03947773.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis TX0104] gi|229546597|ref|ZP_04435322.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis TX1322] gi|229548704|ref|ZP_04437429.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis ATCC 29200] gi|255971218|ref|ZP_05421804.1| amino acid ABC transporter [Enterococcus faecalis T1] gi|255973841|ref|ZP_05424427.1| aminoacid ABC transporter [Enterococcus faecalis T2] gi|256617647|ref|ZP_05474493.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis ATCC 4200] gi|256854374|ref|ZP_05559738.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256957372|ref|ZP_05561543.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis DS5] gi|256959892|ref|ZP_05564063.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis Merz96] gi|257086118|ref|ZP_05580479.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis D6] gi|257089189|ref|ZP_05583550.1| ABC amino acid transporter [Enterococcus faecalis CH188] gi|257415331|ref|ZP_05592325.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis AR01/DG] gi|257421017|ref|ZP_05598007.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|293384723|ref|ZP_06630577.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Enterococcus faecalis R712] gi|293387465|ref|ZP_06632017.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Enterococcus faecalis S613] gi|294781574|ref|ZP_06746911.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|300862075|ref|ZP_07108155.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|307269814|ref|ZP_07551144.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|307276261|ref|ZP_07557389.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|307284476|ref|ZP_07564638.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|307289545|ref|ZP_07569490.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|312900356|ref|ZP_07759667.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|312904217|ref|ZP_07763379.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|312908578|ref|ZP_07767521.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|312910503|ref|ZP_07769348.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|312951870|ref|ZP_07770759.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|227074829|gb|EEI12792.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis TX0104] gi|229306170|gb|EEN72166.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis ATCC 29200] gi|229308287|gb|EEN74274.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis TX1322] gi|255962236|gb|EET94712.1| amino acid ABC transporter [Enterococcus faecalis T1] gi|255966713|gb|EET97335.1| aminoacid ABC transporter [Enterococcus faecalis T2] gi|256597174|gb|EEU16350.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis ATCC 4200] gi|256709934|gb|EEU24978.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256947868|gb|EEU64500.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis DS5] gi|256950388|gb|EEU67020.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis Merz96] gi|256994148|gb|EEU81450.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis D6] gi|256998001|gb|EEU84521.1| ABC amino acid transporter [Enterococcus faecalis CH188] gi|257157159|gb|EEU87119.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis ARO1/DG] gi|257162841|gb|EEU92801.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|291077973|gb|EFE15337.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Enterococcus faecalis R712] gi|291083116|gb|EFE20079.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Enterococcus faecalis S613] gi|294451352|gb|EFG19817.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|295114022|emb|CBL32659.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)/amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp. 7L76] gi|300848600|gb|EFK76357.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|306499506|gb|EFM68878.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|306503153|gb|EFM72407.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|306507061|gb|EFM76203.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|306513924|gb|EFM82526.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|310625464|gb|EFQ08747.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|310630168|gb|EFQ13451.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|310632313|gb|EFQ15596.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|311289199|gb|EFQ67755.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|311292544|gb|EFQ71100.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|315025741|gb|EFT37673.1| ABC transporter, permease protein [Enterococcus faecalis TX2137] gi|315031474|gb|EFT43406.1| ABC transporter, permease protein [Enterococcus faecalis TX0017] gi|315036139|gb|EFT48071.1| ABC transporter, permease protein [Enterococcus faecalis TX0027] gi|315145263|gb|EFT89279.1| ABC transporter, permease protein [Enterococcus faecalis TX2141] gi|315148141|gb|EFT92157.1| ABC transporter, permease protein [Enterococcus faecalis TX4244] gi|315151540|gb|EFT95556.1| ABC transporter, permease protein [Enterococcus faecalis TX0012] gi|315153184|gb|EFT97200.1| ABC transporter, permease protein [Enterococcus faecalis TX0031] gi|315154902|gb|EFT98918.1| ABC transporter, permease protein [Enterococcus faecalis TX0043] gi|315161961|gb|EFU05978.1| ABC transporter, permease protein [Enterococcus faecalis TX0645] gi|315164648|gb|EFU08665.1| ABC transporter, permease protein [Enterococcus faecalis TX1302] gi|315170674|gb|EFU14691.1| ABC transporter, permease protein [Enterococcus faecalis TX1342] gi|315578044|gb|EFU90235.1| ABC transporter, permease protein [Enterococcus faecalis TX0630] gi|323479955|gb|ADX79394.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis 62] gi|327534349|gb|AEA93183.1| amino acid ABC superfamily ATP binding cassette transporter, binding/permease protein [Enterococcus faecalis OG1RF] gi|329577603|gb|EGG59036.1| ABC transporter, permease protein [Enterococcus faecalis TX1467] Length = 722 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 79/198 (39%), Positives = 124/198 (62%), Gaps = 9/198 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS---LIMHFYVWIFRG 67 +++ QLL+ + +T+ + ISFV++LI+G VI FS + I ++ YV + RG Sbjct: 516 NNWKQLLHG-LWMTILLTLISFVLALIVG----VIFGLFSVSPIKALRVLSTIYVDLIRG 570 Query: 68 TPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PL+V F I++GLP + G F+A II+LTLN SAYISEI+R I ++P GQ +AS Sbjct: 571 IPLMVLAFFIYFGLPGVLGFNIPVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASR 630 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ +T++ IILPQ I ++F+ LK T++ S I + E+ QT + IV+ T Sbjct: 631 SLGLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTL 690 Query: 187 QPLIIYCELAFVYLILTS 204 Q ++Y +A +YLIL + Sbjct: 691 QSTMVYFVIALIYLILIT 708 >gi|134298596|ref|YP_001112092.1| polar amino acid ABC transporter, inner membrane subunit [Desulfotomaculum reducens MI-1] gi|134051296|gb|ABO49267.1| amino acid ABC transporter membrane protein, PAAT family [Desulfotomaculum reducens MI-1] Length = 221 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 73/196 (37%), Positives = 121/196 (61%), Gaps = 3/196 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D+FP +L + +T+ + ++ IIG F+ + ++ +I + Y+ FRG+PL Sbjct: 9 DAFP-ILMMGLKLTIQLTSLAVFFGCIIGLFVGLGKMS-RIKLIKIPAITYIEFFRGSPL 66 Query: 71 LVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LVQLF+I++GLP I G D F + + L+LN AY +EI R+ I SI KGQ +A+ ++G Sbjct: 67 LVQLFLIYFGLPQILGHPVDRFWSAVAVLSLNSGAYCAEIFRAGIQSIEKGQMEAARSLG 126 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 +T Q +R++ILPQ PL +EFI+++K TS+ S I + E+ ++ Q +STTY+ Sbjct: 127 MTHIQAMRYVILPQAFKRVIPPLGNEFIAMMKDTSLVSVIGMAELARSGQLYISTTYKAF 186 Query: 190 IIYCELAFVYLILTSF 205 I+ +A Y+++T F Sbjct: 187 QIWFLVAIFYIVMTLF 202 >gi|29375354|ref|NP_814508.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis V583] gi|227554876|ref|ZP_03984923.1| amino acid ABC superfamily ATP binding cassette transporter protein [Enterococcus faecalis HH22] gi|256761528|ref|ZP_05502108.1| amino acid ABC transporter [Enterococcus faecalis T3] gi|257081023|ref|ZP_05575384.1| ABC-type amino acid transport/signal transduction protein system [Enterococcus faecalis E1Sol] gi|257083683|ref|ZP_05578044.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis Fly1] gi|257418368|ref|ZP_05595362.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|29342814|gb|AAO80578.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis V583] gi|227175989|gb|EEI56961.1| amino acid ABC superfamily ATP binding cassette transporter protein [Enterococcus faecalis HH22] gi|256682779|gb|EEU22474.1| amino acid ABC transporter [Enterococcus faecalis T3] gi|256989053|gb|EEU76355.1| ABC-type amino acid transport/signal transduction protein system [Enterococcus faecalis E1Sol] gi|256991713|gb|EEU79015.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis Fly1] gi|257160196|gb|EEU90156.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|315573457|gb|EFU85648.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B] gi|315581418|gb|EFU93609.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A] Length = 722 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 79/198 (39%), Positives = 124/198 (62%), Gaps = 9/198 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS---LIMHFYVWIFRG 67 +++ QLL+ + +T+ + ISFV++LI+G VI FS + I ++ YV + RG Sbjct: 516 NNWKQLLHG-LWMTILLTLISFVLALIVG----VIFGLFSVSPIKALRVLSTIYVDLIRG 570 Query: 68 TPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PL+V F I++GLP + G F+A II+LTLN SAYISEI+R I ++P GQ +AS Sbjct: 571 IPLMVLAFFIYFGLPGVLGFNIPVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASR 630 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ +T++ IILPQ I ++F+ LK T++ S I + E+ QT + IV+ T Sbjct: 631 SLGLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTL 690 Query: 187 QPLIIYCELAFVYLILTS 204 Q ++Y +A +YLIL + Sbjct: 691 QSTMVYFVIALIYLILIT 708 >gi|188590526|ref|YP_001920426.1| L-cystine transport system permease protein TcyB [Clostridium botulinum E3 str. Alaska E43] gi|188500807|gb|ACD53943.1| L-cystine transport system permease protein TcyB [Clostridium botulinum E3 str. Alaska E43] Length = 213 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 124/215 (57%), Gaps = 11/215 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 N I+ PQ+L + VTL + ++ ++S+ +G +A+ R ++ + YV I Sbjct: 1 MNYILSLMPQIL-EGLKVTLEVFVLTLILSIPLGIVVALARTS-KFLVLRKLTGIYVLIM 58 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLL+Q+ VIF+GLP +GI FD F A I++ LN++AY EI R+ IISI KGQ++A+ Sbjct: 59 RGTPLLLQIVVIFFGLPTMGITFDRFTAAILAFVLNYAAYFGEIFRAGIISIDKGQYEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GLT K T IILPQ I P+++E +++K TS+ I + E+ + A +I S Sbjct: 119 EMLGLTYKDTFFRIILPQAIKRVIPPVANEITTLIKDTSLVYIIGLDELLKIA-KIASNR 177 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ + LIL Y++ I I S + + Sbjct: 178 --------DVTLIPLILAGVVYLVVIGILSKLLEK 204 >gi|315029877|gb|EFT41809.1| ABC transporter, permease protein [Enterococcus faecalis TX4000] Length = 722 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 79/198 (39%), Positives = 124/198 (62%), Gaps = 9/198 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS---LIMHFYVWIFRG 67 +++ QLL+ + +T+ + ISFV++LI+G VI FS + I ++ YV + RG Sbjct: 516 NNWKQLLHG-LWMTILLTLISFVLALIVG----VIFGLFSVSPIKALRVLSTIYVDLIRG 570 Query: 68 TPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PL+V F I++GLP + G F+A II+LTLN SAYISEI+R I ++P GQ +AS Sbjct: 571 IPLMVLAFFIYFGLPGVLGFNIPVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASR 630 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ +T++ IILPQ I ++F+ LK T++ S I + E+ QT + IV+ T Sbjct: 631 SLGLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTL 690 Query: 187 QPLIIYCELAFVYLILTS 204 Q ++Y +A +YLIL + Sbjct: 691 QSTMVYFVIALIYLILIT 708 >gi|291618614|ref|YP_003521356.1| YecS [Pantoea ananatis LMG 20103] gi|291153644|gb|ADD78228.1| YecS [Pantoea ananatis LMG 20103] gi|327394994|dbj|BAK12416.1| inner membrane amino-acid ABC transporter permease protein YecS [Pantoea ananatis AJ13355] Length = 214 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 72/217 (33%), Positives = 126/217 (58%), Gaps = 5/217 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 LI+ S P LL+ +V+TL ++ + S ++G A++R + I Y +FR Sbjct: 3 ELILSSLP-LLWRGLVITLLLSVAAIAGSTLLGLLAAILRTS-RIPVARQIAVIYTELFR 60 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTP+L+ L I++G+ + G + F A I+ L++ AYI+EI R I ++PKGQW+ S+ Sbjct: 61 GTPVLITLMFIYFGVAYFGYDINLFAAGILGLSIYQGAYIAEIFRGGIEAVPKGQWEVSW 120 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +GL+R+QT +ILPQT PL +++S++K TS+ S I + E+ Q IV Sbjct: 121 ILGLSRRQTFTSVILPQTRGIVLPPLVGQYLSLIKDTSIVSMIGMSELMHQGQAIVDRIG 180 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 QP+++Y +A +Y ++ C+ + ++ T+++ S Sbjct: 181 QPVVVYGLVALLYFVI---CFPLSRWVQHQQTRNSLS 214 >gi|326203069|ref|ZP_08192935.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium papyrosolvens DSM 2782] gi|325986715|gb|EGD47545.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium papyrosolvens DSM 2782] Length = 218 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 78/221 (35%), Positives = 134/221 (60%), Gaps = 10/221 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH- 59 MKY+W +++I+ FP L AA TL I + ++ L+IG ++ RI + I LI + Sbjct: 1 MKYDW-SILIEKFPIFLPAAFE-TLKITAAAIIVGLVIGLLTSMCRI----SKIKLIYYP 54 Query: 60 --FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 FYV + RGTP+L+QLF+++YGL I + ++ + II+ L+ AYISEI R +I SI Sbjct: 55 ATFYVNLVRGTPILLQLFIVYYGLTDI-VNLSAYPSAIIAFGLHNGAYISEIFRGAIKSI 113 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 +GQ++A+ +IG+++ + + IILPQ + + PL ++FI K +S+AS +T+ E+ Sbjct: 114 DRGQFEAARSIGMSKFRAMYRIILPQALKRAVPPLGNQFIIATKDSSLASAVTVKELLLK 173 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 +Q++ S+T++ + + Y I+TS K+E + Sbjct: 174 SQQMGSSTFRFMEYFLIAGIYYFIMTSILGFFVHKLEKRLA 214 >gi|307296217|ref|ZP_07576045.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|306496091|gb|EFM65673.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|315159996|gb|EFU04013.1| ABC transporter, permease protein [Enterococcus faecalis TX0312] Length = 722 Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 79/198 (39%), Positives = 124/198 (62%), Gaps = 9/198 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS---LIMHFYVWIFRG 67 +++ QLL+ + +T+ + ISFV++LI+G VI FS + I ++ YV + RG Sbjct: 516 NNWKQLLHG-LWMTILLTLISFVLALIVG----VIFGLFSVSPIKALRVLSTIYVDLIRG 570 Query: 68 TPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PL+V F I++GLP + G F+A II+LTLN SAYISEI+R I ++P GQ +AS Sbjct: 571 IPLMVLAFFIYFGLPGVLGFNIPVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASR 630 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ +T++ IILPQ I ++F+ LK T++ S I + E+ QT + IV+ T Sbjct: 631 SLGLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTL 690 Query: 187 QPLIIYCELAFVYLILTS 204 Q ++Y +A +YLIL + Sbjct: 691 QSTMVYFVIALIYLILIT 708 >gi|261213265|ref|ZP_05927547.1| amino acid ABC transproter permease protein [Vibrio sp. RC341] gi|260837539|gb|EEX64242.1| amino acid ABC transproter permease protein [Vibrio sp. RC341] Length = 223 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 75/197 (38%), Positives = 121/197 (61%), Gaps = 5/197 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ +++ P LL + TL +A V +LI+ +A IR+F ++ + Y+ F Sbjct: 5 FHYMLELLPILL-KYLGTTLEMASWGLVFALILALILANIRVF-KVPVLDPLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP I + D+F A +I LTL+F+AY++E IR++II I + Q Sbjct: 63 RGTPLLVQLFLLYYGLPQIFPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQM 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G+T Q +R IILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 123 EASLSVGMTTSQAMRRIILPQAARVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEA 182 Query: 183 STTYQPLIIYCELAFVY 199 S++++ + +A +Y Sbjct: 183 SSSFRFFEAFLAVALIY 199 >gi|256964404|ref|ZP_05568575.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis HIP11704] gi|307272573|ref|ZP_07553826.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|256954900|gb|EEU71532.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis HIP11704] gi|306510858|gb|EFM79875.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] Length = 722 Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 79/198 (39%), Positives = 124/198 (62%), Gaps = 9/198 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS---LIMHFYVWIFRG 67 +++ QLL+ + +T+ + ISFV++LI+G VI FS + I ++ YV + RG Sbjct: 516 NNWKQLLHG-LWMTILLTLISFVLALIVG----VIFGLFSVSPIKALRVLSTIYVDLIRG 570 Query: 68 TPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PL+V F I++GLP + G F+A II+LTLN SAYISEI+R I ++P GQ +AS Sbjct: 571 IPLMVLAFFIYFGLPGVLGFNIPVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASR 630 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ +T++ IILPQ I ++F+ LK T++ S I + E+ QT + IV+ T Sbjct: 631 SLGLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTL 690 Query: 187 QPLIIYCELAFVYLILTS 204 Q ++Y +A +YLIL + Sbjct: 691 QSTMVYFVIALIYLILIT 708 >gi|315166947|gb|EFU10964.1| ABC transporter, permease protein [Enterococcus faecalis TX1341] Length = 722 Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 79/198 (39%), Positives = 124/198 (62%), Gaps = 9/198 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS---LIMHFYVWIFRG 67 +++ QLL+ + +T+ + ISFV++LI+G VI FS + I ++ YV + RG Sbjct: 516 NNWKQLLHG-LWMTILLTLISFVLALIVG----VIFGLFSVSPIKALRVLSTIYVDLIRG 570 Query: 68 TPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PL+V F I++GLP + G F+A II+LTLN SAYISEI+R I ++P GQ +AS Sbjct: 571 IPLMVLAFFIYFGLPGVLGFNIPVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASR 630 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ +T++ IILPQ I ++F+ LK T++ S I + E+ QT + IV+ T Sbjct: 631 SLGLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTL 690 Query: 187 QPLIIYCELAFVYLILTS 204 Q ++Y +A +YLIL + Sbjct: 691 QSTMVYFVIALIYLILIT 708 >gi|326792531|ref|YP_004310352.1| polar amino acid ABC transporter inner membrane protein [Clostridium lentocellum DSM 5427] gi|326543295|gb|ADZ85154.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium lentocellum DSM 5427] Length = 229 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 77/200 (38%), Positives = 118/200 (59%), Gaps = 2/200 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E+F+ +++ P+ L + +TL ++ S ++ + G ++++ ++ LI Y+ Sbjct: 13 EFFSTVLNFMPKFL-PGVWMTLQLSFYSILLGTLFGLLATILKLSKKKILMQLI-DCYIT 70 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I RGTPLL+QL IF LP +GI FDSF + II L + AYISEI R +I SI KGQ + Sbjct: 71 IVRGTPLLLQLIFIFSALPQLGIEFDSFSSAIIGLAFHSGAYISEIFRGAIESIDKGQNE 130 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+G+T+ Q +R IILPQ S L ++FI +K +S+AS ITI EI ++ S Sbjct: 131 AAKALGMTKLQAMRRIILPQAFKRSIPALGNQFIIAIKDSSLASAITITEIIMLTRQYAS 190 Query: 184 TTYQPLIIYCELAFVYLILT 203 + I+ A YLI+T Sbjct: 191 IKFDAFPIFFVAALYYLIIT 210 >gi|227501171|ref|ZP_03931220.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Anaerococcus tetradius ATCC 35098] gi|227216572|gb|EEI81976.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Anaerococcus tetradius ATCC 35098] Length = 521 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 78/204 (38%), Positives = 121/204 (59%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMH--------F 60 ++ L +V T+ IA +S ++ +IG +AVIR + +D +IS H Sbjct: 288 TYSGLFLKGVVNTMFIAVVSTILGFLIGLIVAVIRRLEVKKTDNVISYYFHKIINAILAA 347 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV IFRGTP++VQ +IFYGL + I + A ++ +++N AY+SE++R I SI K Sbjct: 348 YVEIFRGTPMMVQSVIIFYGLKQYFDIDLSTIFAAVLIVSINTGAYLSEVVRGGINSINK 407 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A AIG+T QT+ H+ILPQTI T L +EF+ +K TSV + I++ E+F ++ Sbjct: 408 GQFEACKAIGMTHFQTMIHVILPQTILTILPSLGNEFVINIKDTSVLNVISVTELFFMSK 467 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 + +TYQ Y A +Y +LT Sbjct: 468 SVAGSTYQYFPTYLITAVIYFVLT 491 >gi|258622956|ref|ZP_05717971.1| amino acid ABC transproter, permease protein [Vibrio mimicus VM573] gi|262166783|ref|ZP_06034520.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223] gi|262172776|ref|ZP_06040454.1| amino acid ABC transproter permease protein [Vibrio mimicus MB-451] gi|258584739|gb|EEW09473.1| amino acid ABC transproter, permease protein [Vibrio mimicus VM573] gi|261893852|gb|EEY39838.1| amino acid ABC transproter permease protein [Vibrio mimicus MB-451] gi|262026499|gb|EEY45167.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223] Length = 223 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 79/221 (35%), Positives = 130/221 (58%), Gaps = 9/221 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ +++ P LL + TL +A V +LI+ +A IR+F ++ + Y+ F Sbjct: 5 FHYMLELLPILL-KYLGTTLEMASWGLVFALILALVLANIRVF-KVPVLDPLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP I + D+F A +I LTL+F+AY++E IR++II I + Q Sbjct: 63 RGTPLLVQLFLLYYGLPQIFPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQM 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G+T Q +R IILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 123 EASLSVGMTTSQAMRRIILPQAARVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEA 182 Query: 183 STTYQPLIIYCELAFVY----LILTSFCYIIQIKIESSVTQ 219 S++++ + +A +Y L+LT + K+ + + Sbjct: 183 SSSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKLNKAYAR 223 >gi|325841208|ref|ZP_08167333.1| putative arginine ABC transporter, permease protein ArtQ [Turicibacter sp. HGF1] gi|325490065|gb|EGC92411.1| putative arginine ABC transporter, permease protein ArtQ [Turicibacter sp. HGF1] Length = 233 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 69/227 (30%), Positives = 126/227 (55%), Gaps = 12/227 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD---TIISLIMHFYV 62 F ++D +P LL VT+ +A I+ +IG +++ + ++S + YV Sbjct: 8 FEFLVDYYPMLL-KGTGVTIALALITVFFGTLIGILVSLTKFNAKGMLGKVLSKLADAYV 66 Query: 63 WIFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 FRGTPL++QLF++++G+P + G + F+ I+L +N AY+SEI R+ I Sbjct: 67 AFFRGTPLMIQLFILWFGVPQLLHTRYPSFGWISAEFLVGAIALAINSGAYVSEIFRAGI 126 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ KGQ++A ++GL+ KQT++H+ILPQ + L +EF+ I+K +++ S I + ++ Sbjct: 127 QAVDKGQFEAGRSLGLSEKQTLKHVILPQAVKNILPALGNEFVVIIKESAIVSVIGLRDL 186 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + I + T+ +Y A +Y ILT+ C + +E + Q Sbjct: 187 MYNSDMIQAATFNAFGVYVVAAVIYFILTASCSKLLSVLEGRLHQDA 233 >gi|258626080|ref|ZP_05720931.1| amino acid ABC transproter, permease protein [Vibrio mimicus VM603] gi|258581606|gb|EEW06504.1| amino acid ABC transproter, permease protein [Vibrio mimicus VM603] Length = 223 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 75/203 (36%), Positives = 121/203 (59%), Gaps = 8/203 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL +A V +LI+ +A IR+F ++ + Y+ FRGTPLLVQLF+++YGLP Sbjct: 22 TLEMASWGLVFALILALVLANIRVF-KVPVLDPLSQLYISFFRGTPLLVQLFLLYYGLPQ 80 Query: 84 IG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 I + D+F A +I LTL+F+AY++E IR++II I + Q +AS ++G+T Q +R II Sbjct: 81 IFPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSVGMTTSQAMRRII 140 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY- 199 LPQ + L + FI ++KSTS+A T+ + EI AQ S++++ + +A +Y Sbjct: 141 LPQAARVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYW 200 Query: 200 ---LILTSFCYIIQIKIESSVTQ 219 L+LT + K+ + + Sbjct: 201 VVVLVLTRLQSWAEQKLNKAYAR 223 >gi|319784007|ref|YP_004143483.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169895|gb|ADV13433.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 219 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 122/204 (59%), Gaps = 12/204 (5%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 V+T+ +SFV G AVI + ++ I++ + +W+F GTPLL+QLF+I++GL Sbjct: 25 VLTVSAGALSFVG----GILFAVI-VLYAPKIVAYPVRALMWVFMGTPLLLQLFLIYFGL 79 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IGI + A I+ L L+F+ Y ++IIR+ I+++ GQ + + +IG + QT+RH+++ Sbjct: 80 VQIGIDIPALAAGIVGLGLHFAVYNADIIRAGIVAVDVGQTEGARSIGFGKWQTLRHVVI 139 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ I +A P+ I++LK +S+ S I I E+ +AQ +S T++P Y A +Y Sbjct: 140 PQAIRNTAPPIGGNLIALLKESSIVSVIGIAELVHSAQLAISETFRPFEFYITAAALY-- 197 Query: 202 LTSFCYIIQIKIESSVTQHTYSVD 225 YI+ + +E+++ + V+ Sbjct: 198 -----YILNLVLEAALRRFERHVE 216 >gi|260583731|ref|ZP_05851479.1| polar amino acid uptake (PAAT) family ABC transporter permease [Granulicatella elegans ATCC 700633] gi|260158357|gb|EEW93425.1| polar amino acid uptake (PAAT) family ABC transporter permease [Granulicatella elegans ATCC 700633] Length = 216 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 66/176 (37%), Positives = 113/176 (64%), Gaps = 1/176 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL IA +SF+ I+GF +++ + ++ +I +F+V RGTP LV LF++++GLP+ Sbjct: 21 TLGIAGVSFIFGTILGFMFVLMKRS-NIRVLRMIANFHVSFMRGTPTLVFLFLLYFGLPY 79 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + I + V I+ ++ SAYI E++RSSI ++ GQW+AS ++GL QT+R +I+PQ Sbjct: 80 LKIQLPALVCAILCFSIASSAYICEVLRSSIDAVDYGQWEASTSLGLNYFQTLRRVIVPQ 139 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 S PLS+ + ++K TS+A+ IT+P+IFQ A+ + + + +Y +A +Y Sbjct: 140 AFRISVPPLSNVLLDMIKGTSLAAMITVPDIFQNAKIVGGREFDYMTMYILVALIY 195 >gi|78044176|ref|YP_359363.1| glutamine ABC transporter permease [Carboxydothermus hydrogenoformans Z-2901] gi|77996291|gb|ABB15190.1| glutamine ABC transporter, permease protein [Carboxydothermus hydrogenoformans Z-2901] Length = 228 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 75/211 (35%), Positives = 121/211 (57%), Gaps = 11/211 (5%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+ +W +++I+S P LL +VTL I I+ + IIG F ++RI + ++ I Sbjct: 1 MELKW-SVVIESLP-LLAEGALVTLKITVIAVTLGSIIGLFAGLMRIA-RNPLLKFIARV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDS--------FVAIIISLTLNFSAYISEIIRS 112 YV RGTPLLVQ+F+I+YG P + + A I S ++N AY++EI R+ Sbjct: 58 YVDFIRGTPLLVQIFIIYYGFPQLWAALTGGQPHAISPWAAAIASTSINSGAYVAEIFRA 117 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I SI +GQ +A+ ++G+T Q +R++ILPQ PL +EFI++LK TS+ S I Sbjct: 118 GIQSIDRGQMEAARSLGMTYGQAMRYVILPQAFKRVIPPLGNEFIAMLKDTSLLSVIGFE 177 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+ + I+ + ++ +A +YLI+T Sbjct: 178 ELARRGALIIGYNARAFEVWFAVAILYLIMT 208 >gi|293374469|ref|ZP_06620791.1| ABC transporter, permease protein [Turicibacter sanguinis PC909] gi|292646848|gb|EFF64836.1| ABC transporter, permease protein [Turicibacter sanguinis PC909] Length = 228 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 69/227 (30%), Positives = 126/227 (55%), Gaps = 12/227 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD---TIISLIMHFYV 62 F ++D +P LL VT+ +A I+ +IG +++ + ++S + YV Sbjct: 3 FEFLVDYYPMLL-KGTGVTIALALITVFFGTLIGILVSLTKFNAKGMLGKVLSKLADAYV 61 Query: 63 WIFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 FRGTPL++QLF++++G+P + G + F+ I+L +N AY+SEI R+ I Sbjct: 62 AFFRGTPLMIQLFILWFGVPQLLHTRYPSFGWISAEFLVGAIALAINSGAYVSEIFRAGI 121 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ KGQ++A ++GL+ KQT++H+ILPQ + L +EF+ I+K +++ S I + ++ Sbjct: 122 QAVDKGQFEAGRSLGLSEKQTLKHVILPQAVKNILPALGNEFVVIIKESAIVSVIGLRDL 181 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + I + T+ +Y A +Y ILT+ C + +E + Q Sbjct: 182 MYNSDMIQAATFNAFGVYVVAAVIYFILTASCSKLLSVLEGRLHQDA 228 >gi|54307243|ref|YP_128263.1| amino acid ABC transporter permease [Photobacterium profundum SS9] gi|46911663|emb|CAG18461.1| Putative amino acid ABC transporter, permease protein [Photobacterium profundum SS9] Length = 241 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 70/179 (39%), Positives = 115/179 (64%), Gaps = 4/179 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL +A +LII +A++R++ +++ + Y+ FRGTPLLVQLF+++YGLP Sbjct: 40 TLSMAVWGLGFALIIAITLALVRVY-KLPVLNQLSQLYISFFRGTPLLVQLFLLYYGLPQ 98 Query: 84 IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 + +F D+F A +I L+L+F+AY++E IR++II + + Q +AS AIG+T Q +R II Sbjct: 99 VFPIFIGLDAFSAAVIGLSLHFAAYMAESIRAAIIGVDRCQREASLAIGMTEMQAMRRII 158 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 LPQ + L + FI ++KSTS+A T+ + EI AQ S++++ + +AF+Y Sbjct: 159 LPQATRIALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFKFFEAFLAVAFIY 217 >gi|15893668|ref|NP_347017.1| amino acid ABC transporter permease [Clostridium acetobutylicum ATCC 824] gi|15023226|gb|AAK78357.1|AE007552_7 Amino acid (glutamine) ABC transporter, permease component [Clostridium acetobutylicum ATCC 824] Length = 216 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 75/214 (35%), Positives = 125/214 (58%), Gaps = 3/214 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN + P LL +V T+ + ++ + II +A++++ ++ ++ + FY WIF Sbjct: 3 FNTLDKVIPVLLRGTLV-TIKLTFMAIIFGCIIALLVAILKVS-ANKFLNAVGGFYTWIF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLL+QL+V +YGLP + I + A I+ L+LN AYI+EIIR II+I KGQ++AS Sbjct: 61 RGTPLLLQLYVFYYGLPALNINISATQAAILGLSLNSGAYIAEIIRGGIIAIDKGQFEAS 120 Query: 126 YAIGLTRKQTIRH-IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+G T I + + P+ +EFI+++K TS+ S IT+ E+ + AQ +VS+ Sbjct: 121 KALGFPEGPTNEEGYICLKLLEVINPPMGNEFIALIKDTSLVSVITMEELLRKAQLLVSS 180 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 + + Y YL+LT+ + +IE ++ Sbjct: 181 SGDAVTPYVITGVFYLVLTTVFTFLFSRIEKKLS 214 >gi|223933393|ref|ZP_03625380.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] gi|302023343|ref|ZP_07248554.1| transport system membrane protein [Streptococcus suis 05HAS68] gi|330832144|ref|YP_004400969.1| polar amino acid ABC transporter inner membrane subunit [Streptococcus suis ST3] gi|223897960|gb|EEF64334.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] gi|329306367|gb|AEB80783.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis ST3] Length = 223 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 78/225 (34%), Positives = 128/225 (56%), Gaps = 7/225 (3%) Query: 1 MKYEW---FNLII--DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS 55 M W FN I ++ PQ+L + TL ++ I F + GFF+A +R+ + Sbjct: 1 MDINWQAVFNADIAREAIPQIL-EGLPYTLSLSLIGFALGTFCGFFVAFMRMSKFGPLRW 59 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 L M ++ + RG PL+V LF I++GLP +G+ D+ A II+ T SAYISEIIR+S+ Sbjct: 60 LAMA-HISLMRGIPLMVLLFFIYFGLPFMGLQLDAISASIIAFTSMSSAYISEIIRASLS 118 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +I KGQW+A+ ++GL R II+PQ + PLS+ + ++KSTS+ + IT+PEIF Sbjct: 119 AIDKGQWEAARSLGLRTNVIYRKIIIPQAFRIALPPLSNVLLDMVKSTSLTAMITVPEIF 178 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 A+ + + +Y +A +Y + + Q+++E + + Sbjct: 179 NKAKIVGGAKSDYMTVYICVALIYWAICTLYAFGQLRLEKRLATY 223 >gi|262402084|ref|ZP_06078648.1| amino acid ABC transproter permease protein [Vibrio sp. RC586] gi|262351730|gb|EEZ00862.1| amino acid ABC transproter permease protein [Vibrio sp. RC586] Length = 223 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 74/197 (37%), Positives = 121/197 (61%), Gaps = 5/197 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ +++ P LL + TL +A V +LI+ +A IR+F ++ + Y+ F Sbjct: 5 FHYMLELLPILL-KYLGTTLEMASWGLVFALILALILANIRVF-KVPVLDPLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP + + D+F A +I LTL+F+AY++E IR++II I + Q Sbjct: 63 RGTPLLVQLFLLYYGLPQVFPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQM 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G+T Q +R IILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 123 EASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEA 182 Query: 183 STTYQPLIIYCELAFVY 199 S++++ + +A +Y Sbjct: 183 SSSFRFFEAFLAVALIY 199 >gi|71083898|ref|YP_266618.1| octopine-like transport system permease protein oocM [Candidatus Pelagibacter ubique HTCC1062] gi|91763031|ref|ZP_01264995.1| octopine-like transport system permease protein oocM [Candidatus Pelagibacter ubique HTCC1002] gi|71063011|gb|AAZ22014.1| octopine-like transport system permease protein oocM [Candidatus Pelagibacter ubique HTCC1062] gi|91717444|gb|EAS84095.1| octopine-like transport system permease protein oocM [Candidatus Pelagibacter ubique HTCC1002] Length = 224 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 81/207 (39%), Positives = 125/207 (60%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+L+I S P+LL AA V+TL + S +I L IGF AV+R+ + I+ + Y ++F Sbjct: 3 FDLMITSLPKLLSAA-VITLKLLSASLIIGLFIGFLFAVLRLN-KNPFINKFAYGYSYLF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAII---------ISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQ+F+I+YGL I + +F+ +I I+ LN AY SEI+RS+ + Sbjct: 61 RGTPLLVQIFIIYYGLGQIEWLRSTFLWVILKEPYWCAIIAFALNTGAYTSEILRSAFQT 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I G +A ++G++ K + I +P I S +E I ++K TS+AST+T+ +I Sbjct: 121 IKPGIIEAGKSLGISSKIILYKIQIPVAIRQSLPAYGNEIILMMKGTSLASTVTLMDITG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ IVSTTY+PL ++ +YL +T Sbjct: 181 VAKHIVSTTYKPLEVFLLAGGIYLFMT 207 >gi|86138395|ref|ZP_01056969.1| amino acid ABC transporter, permease protein [Roseobacter sp. MED193] gi|85824920|gb|EAQ45121.1| amino acid ABC transporter, permease protein [Roseobacter sp. MED193] Length = 215 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 56/142 (39%), Positives = 97/142 (68%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV +FRGTP L+QLF++++G P IGI D+F A +I L +N AY++E +R +IIS+ KG Sbjct: 56 YVSVFRGTPALIQLFILYFGGPQIGIQLDAFEAGVIGLGVNVGAYMTETMRGAIISVDKG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ +G+++ Q +R++ILPQ + PL +++KST++ + I++ E+ TAQR Sbjct: 116 QGEAARTLGMSKWQAMRNVILPQAMRLMIRPLGVNLNTLIKSTALVAAISVVELTYTAQR 175 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 + +TY+P ++ +Y+I+ Sbjct: 176 YIGSTYKPFEMFLIAGLLYMII 197 >gi|257470563|ref|ZP_05634653.1| amino acid ABC transporter permease [Fusobacterium ulcerans ATCC 49185] gi|317064769|ref|ZP_07929254.1| amino acid ABC transporter [Fusobacterium ulcerans ATCC 49185] gi|313690445|gb|EFS27280.1| amino acid ABC transporter [Fusobacterium ulcerans ATCC 49185] Length = 208 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 123/200 (61%), Gaps = 6/200 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +T+ + ++ + SL +G +++ R+ +T +S ++ Y W+FRGTPLL+QLF ++Y Sbjct: 11 GMKLTVNLYVVTMLFSLPLGILLSLGRVS-KNTTLSNMIQVYTWVFRGTPLLLQLFFVYY 69 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP +GI F A ++ +N++AY EI R SI+ I GQ++A+ +G+ QT+ I Sbjct: 70 GLPVVGITLTPFAAASLTFVINYTAYFCEIFRGSILGIDPGQYEAAKVLGMKYWQTMIRI 129 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAF 197 I+PQ + T+ PLS+E IS++K TS+ S I + EI + ++ +V+ + P I C A Sbjct: 130 IIPQALITALPPLSNEAISLIKDTSLVSAIGMAEILRNSRELVTRDFSITPFFI-C--AV 186 Query: 198 VYLILTSFCYIIQIKIESSV 217 VYL L++ I ++E V Sbjct: 187 VYLGLSTIVVIFFKRMEKKV 206 >gi|309799781|ref|ZP_07693993.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus infantis SK1302] gi|308116601|gb|EFO54065.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus infantis SK1302] Length = 521 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 78/226 (34%), Positives = 129/226 (57%), Gaps = 11/226 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISLIM 58 ++ +++ QLL A +TL I+ I ++ L+IG I V R IF +I I+ Sbjct: 285 ILTENWQQLLRGA-GITLLISIIGTIVGLVIGLAIGVFRTAPLSENQFIFGIQKLIGWIL 343 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R I+S+ Sbjct: 344 NIYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILSV 403 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 404 DKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFS 463 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + + TYQ + +A +Y +LT I IE + TY+ Sbjct: 464 GNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIEKRMDMDTYT 509 >gi|86147173|ref|ZP_01065489.1| amino acid ABC transproter, permease protein [Vibrio sp. MED222] gi|218708096|ref|YP_002415717.1| putative amino-acid ABC transporter permease PatM [Vibrio splendidus LGP32] gi|85835057|gb|EAQ53199.1| amino acid ABC transproter, permease protein [Vibrio sp. MED222] gi|218321115|emb|CAV17065.1| Probable amino-acid ABC transporter permease protein patM [Vibrio splendidus LGP32] Length = 223 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 76/218 (34%), Positives = 129/218 (59%), Gaps = 9/218 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN +++ P LL + T+ +A +LI+ +A IR+F ++ + Y+ F Sbjct: 5 FNYMLELLPILL-KYLGTTMEMATWGLFFALILSLILANIRVF-KIPVLDQLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP + + D+F A +I LTL+F+AY++E IR++II I + Q Sbjct: 63 RGTPLLVQLFLLYYGLPQVFPWMVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQM 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G+T Q +R +ILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 123 EASLSVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEA 182 Query: 183 STTYQPLIIYCELAFVY----LILTSFCYIIQIKIESS 216 S++++ + +A +Y +ILT ++K+ + Sbjct: 183 SSSFRFFEAFLAVALIYWGVVVILTRIQIWAEVKLNKA 220 >gi|292670308|ref|ZP_06603734.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas noxia ATCC 43541] gi|292648039|gb|EFF66011.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas noxia ATCC 43541] Length = 214 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 61/172 (35%), Positives = 109/172 (63%), Gaps = 1/172 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L+ VTL I C++ +SL +G F A+ R+ I+S ++ Y+WI RGTPL++QL Sbjct: 10 LMLEGSTVTLEIFCVTLALSLPLGLFAALGRLS-RFRILSRLLEVYIWIMRGTPLMLQLL 68 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +++ LP IGI+ A +++ LN++AY +EI RS I ++P+GQ++A+ +G++ T Sbjct: 69 FVYFALPMIGIMLPDIAAALLAFVLNYAAYFAEIFRSGIQAVPRGQFEAARVLGMSAPLT 128 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +R IILPQ + + P+S+E I+++K TS+ + + ++ + A+ IV + Sbjct: 129 MRRIILPQVLRITLPPVSNETINLVKDTSLVYILAMNDLLRVARTIVQREFD 180 >gi|257865935|ref|ZP_05645588.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257872268|ref|ZP_05651921.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257799869|gb|EEV28921.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257806432|gb|EEV35254.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] Length = 717 Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 78/199 (39%), Positives = 118/199 (59%), Gaps = 12/199 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIFYG 80 TL +A ISF ++L+IG + FS I + F YV I RG P++V F IF+G Sbjct: 523 TLLLALISFALALVIGIIFGL----FSVAPIKALRVFAGIYVDIIRGIPMMVLAFFIFFG 578 Query: 81 LPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 L IGI F A +I+LTLN SAYI+EI+R I ++PKGQ +AS ++G+T +T++ I Sbjct: 579 LSDAIGITIPDFAAGVITLTLNASAYIAEIVRGGINAVPKGQMEASRSLGMTYTRTMQKI 638 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ I ++F+ LK T++ S I + E+ QT + IV+ T Q +Y +A +Y Sbjct: 639 ILPQAIKIMIPSFVNQFVISLKDTTIISVIGVVELLQTGKIIVARTTQSTYVYLIIAIIY 698 Query: 200 LI----LTSFCYIIQIKIE 214 L+ LT +++ K++ Sbjct: 699 LVVITALTKLAKVLEKKVK 717 >gi|39998494|ref|NP_954445.1| amino acid ABC transporter permease [Geobacter sulfurreducens PCA] gi|39985441|gb|AAR36795.1| amino acid ABC transporter, permease protein [Geobacter sulfurreducens PCA] gi|298507439|gb|ADI86162.1| amino acid ABC transporter, membrane protein [Geobacter sulfurreducens KN400] Length = 263 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 71/186 (38%), Positives = 113/186 (60%), Gaps = 2/186 (1%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I+VT + + +++L+IG + RI S+ II+ I YV I RG PLLVQLF I+Y Sbjct: 64 GILVTFQVTVGAILLALVIGLVAGLGRIS-SNRIINGIASLYVEIIRGIPLLVQLFYIYY 122 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 L V D + II++ + + AY+ E+IR+ I SIPKGQ +A+ ++G+T+ Q +RH+ Sbjct: 123 ALGRFVHVPD-MASAIIAMAVCYGAYMGEVIRAGIQSIPKGQMEAARSLGMTKGQAMRHV 181 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ P+ +EFI++LK +S+ S + + +I + + S ++ Y +A VY Sbjct: 182 ILPQAAKVVLPPIGNEFIALLKDSSLVSILAVADILRRGREFASESFTYFETYTVIALVY 241 Query: 200 LILTSF 205 LI+T F Sbjct: 242 LIITLF 247 >gi|312872684|ref|ZP_07732749.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2062A-h1] gi|311091726|gb|EFQ50105.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2062A-h1] Length = 535 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 125/212 (58%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI---------FFSDT 52 K WF I+ + +++ +++T+ ++ I +I IG + +IR ++ Sbjct: 284 KTNWFVSIMHRYGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPLSKVKYWLLK 343 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 +I+ ++ YV IFRGTP++VQ VI+YG+ + I D +A + +++N AY++E+IR Sbjct: 344 LINWLLAVYVEIFRGTPMMVQAAVIYYGIAQLWHINLDRTLAALFIISINTGAYLAEVIR 403 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 IIS PKGQ++A+ A+G++ Q + HIILPQ + +++EFI +K TSV S I++ Sbjct: 404 GGIISTPKGQFEAASALGMSHSQKMWHIILPQAVRNCLPSITNEFIVNIKDTSVLSIISV 463 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F + S T+Q Y ++ VYLILT Sbjct: 464 SELFFVGTTVASQTFQFFQTYFIISIVYLILT 495 >gi|315654090|ref|ZP_07907006.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners ATCC 55195] gi|315488786|gb|EFU78432.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners ATCC 55195] Length = 535 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 125/212 (58%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI---------FFSDT 52 K WF I+ + +++ +++T+ ++ I +I IG + +IR ++ Sbjct: 284 KTNWFVSIMHRYGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPISKVKYWLLK 343 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 +I+ ++ YV IFRGTP++VQ VI+YG+ + I D +A + +++N AY++E+IR Sbjct: 344 LINWLLAVYVEIFRGTPMMVQAAVIYYGIAQLWHINLDRTLAALFIISINTGAYLAEVIR 403 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 IIS PKGQ++A+ A+G++ Q + HIILPQ + +++EFI +K TSV S I++ Sbjct: 404 GGIISTPKGQFEAASALGMSHSQKMWHIILPQAVRNCLPSITNEFIVNIKDTSVLSIISV 463 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F + S T+Q Y ++ VYLILT Sbjct: 464 SELFFVGTTVASQTFQFFQTYFIISIVYLILT 495 >gi|312882237|ref|ZP_07741983.1| ABC amino acid transporter permease component [Vibrio caribbenthicus ATCC BAA-2122] gi|309370081|gb|EFP97587.1| ABC amino acid transporter permease component [Vibrio caribbenthicus ATCC BAA-2122] Length = 223 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 74/197 (37%), Positives = 122/197 (61%), Gaps = 5/197 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++ P +L+ + T+ +A V +LI+ IA IR+F S ++S Y+ F Sbjct: 5 FQYMLGLLP-ILFKYLGTTMAMATWGVVFALILALLIANIRVF-SVPLLSPFCQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP I + ++F A +I LTL+F+AY++E IR++II I + Q Sbjct: 63 RGTPLLVQLFLLYYGLPQIFPFLVGLNAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQM 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS +IG+T+ Q ++ +ILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 123 EASLSIGMTKLQAMKRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEA 182 Query: 183 STTYQPLIIYCELAFVY 199 S++++ + +A +Y Sbjct: 183 SSSFRFFEAFLAVALIY 199 >gi|259500817|ref|ZP_05743719.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners DSM 13335] gi|302190732|ref|ZP_07266986.1| ABC transporter permease component [Lactobacillus iners AB-1] gi|309805950|ref|ZP_07699978.1| ABC transporter, permease protein [Lactobacillus iners LactinV 03V1-b] gi|312871166|ref|ZP_07731264.1| ABC transporter, permease protein [Lactobacillus iners LEAF 3008A-a] gi|312873326|ref|ZP_07733381.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2052A-d] gi|325912202|ref|ZP_08174599.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D] gi|325913645|ref|ZP_08176007.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B] gi|329919777|ref|ZP_08276728.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G] gi|259167511|gb|EEW52006.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners DSM 13335] gi|308167663|gb|EFO69814.1| ABC transporter, permease protein [Lactobacillus iners LactinV 03V1-b] gi|311091206|gb|EFQ49595.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2052A-d] gi|311093180|gb|EFQ51526.1| ABC transporter, permease protein [Lactobacillus iners LEAF 3008A-a] gi|325475861|gb|EGC79030.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D] gi|325477004|gb|EGC80154.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B] gi|328937124|gb|EGG33552.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G] Length = 535 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 125/212 (58%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI---------FFSDT 52 K WF I+ + +++ +++T+ ++ I +I IG + +IR ++ Sbjct: 284 KTNWFVSIMHRYGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPLSKVKYWLLK 343 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 +I+ ++ YV IFRGTP++VQ VI+YG+ + I D +A + +++N AY++E+IR Sbjct: 344 LINWLLAVYVEIFRGTPMMVQAAVIYYGIAQLWHINLDRTLAALFIISINTGAYLAEVIR 403 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 IIS PKGQ++A+ A+G++ Q + HIILPQ + +++EFI +K TSV S I++ Sbjct: 404 GGIISTPKGQFEAASALGMSHSQKMWHIILPQAVRNCLPSITNEFIVNIKDTSVLSIISV 463 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F + S T+Q Y ++ VYLILT Sbjct: 464 SELFFVGTTVASQTFQFFQTYFIISIVYLILT 495 >gi|312874740|ref|ZP_07734759.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2053A-b] gi|311089485|gb|EFQ47910.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2053A-b] Length = 535 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 125/212 (58%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI---------FFSDT 52 K WF I+ + +++ +++T+ ++ I +I IG + +IR ++ Sbjct: 284 KTNWFVSIMHRYGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPLSKVKYWLLK 343 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 +I+ ++ YV IFRGTP++VQ VI+YG+ + I D +A + +++N AY++E+IR Sbjct: 344 LINWLLAVYVEIFRGTPMMVQAAVIYYGIAQLWHINLDRTLAALFIISINTGAYLAEVIR 403 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 IIS PKGQ++A+ A+G++ Q + HIILPQ + +++EFI +K TSV S I++ Sbjct: 404 GGIISTPKGQFEAASALGMSHSQKMWHIILPQAVRNCLPSITNEFIVNIKDTSVLSIISV 463 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F + S T+Q Y ++ VYLILT Sbjct: 464 SELFFVGTTVASQTFQFFQTYFIISIVYLILT 495 >gi|167840668|ref|ZP_02467352.1| ABC transporter, inner-membrane component [Burkholderia thailandensis MSMB43] Length = 217 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 70/186 (37%), Positives = 118/186 (63%), Gaps = 3/186 (1%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 AA VTL ++ ++ ++ ++ GF + +R+ F +L ++W+ RGTP L QL +I+ Sbjct: 13 AATAVTLEVSVLAALVGMVAGFTLNALRLAFGRAF-ALPYGVFIWLIRGTPYLSQLVIIY 71 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 +GLP IG+ + A ++SL L SAY +EI R++ S+P+GQ +A+ A G++R+ T R Sbjct: 72 FGLPMIGVTMSAVEATVVSLALYASAYFAEIFRAAWASVPRGQLEAAAAFGVSRRATFRA 131 Query: 139 IILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 I LPQ + A+PL +++ I ++K ++VAS IT+PE+ TA +V++TY + Y L Sbjct: 132 IELPQALAF-ALPLIANQTILVIKESAVASIITVPELTMTASDVVASTYTYIGPYALLIA 190 Query: 198 VYLILT 203 Y +LT Sbjct: 191 CYWLLT 196 >gi|309807608|ref|ZP_07701556.1| ABC transporter, permease protein [Lactobacillus iners LactinV 01V1-a] gi|309809764|ref|ZP_07703618.1| ABC transporter, permease protein [Lactobacillus iners SPIN 2503V10-D] gi|308169144|gb|EFO71214.1| ABC transporter, permease protein [Lactobacillus iners LactinV 01V1-a] gi|308169943|gb|EFO71982.1| ABC transporter, permease protein [Lactobacillus iners SPIN 2503V10-D] Length = 535 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 125/212 (58%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI---------FFSDT 52 K WF I+ + +++ +++T+ ++ I +I IG + +IR ++ Sbjct: 284 KTNWFVSIMHRYGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPLSKVKYWLLK 343 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 +I+ ++ YV IFRGTP++VQ VI+YG+ + I D +A + +++N AY++E+IR Sbjct: 344 LINWLLAVYVEIFRGTPMMVQAAVIYYGIAQLWHINLDRTLAALFIISINTGAYLAEVIR 403 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 IIS PKGQ++A+ A+G++ Q + HIILPQ + +++EFI +K TSV S I++ Sbjct: 404 GGIISTPKGQFEAASALGMSHSQKMWHIILPQAVRNCLPSITNEFIVNIKDTSVLSIISV 463 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F + S T+Q Y ++ VYLILT Sbjct: 464 SELFFVGTTVASQTFQFFQTYFIISIVYLILT 495 >gi|295675493|ref|YP_003604017.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] gi|295435336|gb|ADG14506.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 214 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 71/184 (38%), Positives = 106/184 (57%), Gaps = 1/184 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L +V TL ++ S V S +IG F AV+R F I Y +FRGTP+L+ L Sbjct: 12 ILLQGLVTTLLLSIASIVGSTLIGLFAAVLR-SFGPWGTDRIARLYTELFRGTPVLITLM 70 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I++G+ + G D F A +I L++ AYI+EI RS I ++PKGQW+ S +GLTR Q Sbjct: 71 FIYFGVSYFGYAIDVFAAGVIGLSVYQGAYIAEIFRSGIEAVPKGQWEVSQILGLTRAQA 130 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 ++LPQT PL +++S++K TS+ S I + E+ Q IV +P+ IY + Sbjct: 131 FSFVVLPQTGKIVLPPLVGQYLSLIKDTSIVSMIGMSELMHGGQAIVDRIGKPVEIYGLV 190 Query: 196 AFVY 199 A +Y Sbjct: 191 ALIY 194 >gi|15673741|ref|NP_267915.1| glutamine ABC transporter permease and substrate binding protein [Lactococcus lactis subsp. lactis Il1403] gi|12724781|gb|AAK05857.1|AE006406_1 glutamine ABC transporter permease and substrate binding protein protein [Lactococcus lactis subsp. lactis Il1403] gi|326407245|gb|ADZ64316.1| glutamine ABC transporter permease/substrate-binding protein [Lactococcus lactis subsp. lactis CV56] Length = 714 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 120/202 (59%), Gaps = 8/202 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++VTL +A +SF++++I+G + + S I+ I YV + R PLLV IFY Sbjct: 510 GLLVTLELAILSFILAMIVGIIFGLFSVAPS-KILRTIARIYVDLNRSIPLLVLTIFIFY 568 Query: 80 GLPHIGIV-------FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 G+P++ + + F A +I+LTLN SAYI+EI+RS + ++P GQ +AS ++G+T Sbjct: 569 GIPNLLQIITGHQSPLNEFTAGVIALTLNSSAYIAEIVRSGVQAVPSGQMEASRSLGVTY 628 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 ++R +ILPQ I + L ++FI LK T++ S I + E+ QT Q IV+ +Q +Y Sbjct: 629 LTSMRKVILPQAIKITIPSLINQFIITLKDTTLVSVIGLVELLQTGQIIVARNFQAFRVY 688 Query: 193 CELAFVYLILTSFCYIIQIKIE 214 + VY+I+ F I ++E Sbjct: 689 GLIGLVYMIVLLFLMWIGRRVE 710 >gi|15925403|ref|NP_372937.1| ABC transporter (permease protein) [Staphylococcus aureus subsp. aureus Mu50] gi|15927991|ref|NP_375524.1| hypothetical protein SA2201 [Staphylococcus aureus subsp. aureus N315] gi|21284064|ref|NP_647152.1| hypothetical protein MW2335 [Staphylococcus aureus subsp. aureus MW2] gi|156980728|ref|YP_001442987.1| hypothetical protein SAHV_2397 [Staphylococcus aureus subsp. aureus Mu3] gi|262048821|ref|ZP_06021702.1| hypothetical protein SAD30_0668 [Staphylococcus aureus D30] gi|262051565|ref|ZP_06023786.1| hypothetical protein SA930_1333 [Staphylococcus aureus 930918-3] gi|13702362|dbj|BAB43503.1| SA2201 [Staphylococcus aureus subsp. aureus N315] gi|14248187|dbj|BAB58575.1| ABC transporter (permease protein) [Staphylococcus aureus subsp. aureus Mu50] gi|21205507|dbj|BAB96200.1| MW2335 [Staphylococcus aureus subsp. aureus MW2] gi|156722863|dbj|BAF79280.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|259160549|gb|EEW45572.1| hypothetical protein SA930_1333 [Staphylococcus aureus 930918-3] gi|259163079|gb|EEW47640.1| hypothetical protein SAD30_0668 [Staphylococcus aureus D30] gi|285818074|gb|ADC38561.1| amino acid ABC transporter, permease protein [Staphylococcus aureus 04-02981] Length = 164 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 71/152 (46%), Positives = 99/152 (65%), Gaps = 13/152 (8%) Query: 70 LLVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIPK 119 ++VQLF+IFYG+P +G + + VA II L+LN AY SEIIR IISIPK Sbjct: 1 MIVQLFIIFYGIPELGRLLTNDADNQWTLAPVVAAIIGLSLNVGAYASEIIRGGIISIPK 60 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+Y+IG+T QTI+ IILPQ I S L + F+S++K TS+ I + E+F+ AQ Sbjct: 61 GQTEAAYSIGMTYGQTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQ 120 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + STTY+ L IY +A +Y ++ C+II I Sbjct: 121 EVASTTYEYLTIYVLVALMYWVV---CFIISI 149 >gi|258645330|ref|ZP_05732799.1| glutamine ABC transporter, permease protein [Dialister invisus DSM 15470] gi|260402679|gb|EEW96226.1| glutamine ABC transporter, permease protein [Dialister invisus DSM 15470] Length = 212 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 79/199 (39%), Positives = 115/199 (57%), Gaps = 3/199 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F LI + P LL A VT+ I S I IG F+ + RI I+ ++ Y Sbjct: 3 FELIQRALPILLMGA-GVTIEITAFSVAIGFFIGLFVGIARIS-QFKILRIMAAVYADCI 60 Query: 66 RGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQ+F+I++ LP IG + F+A + + +N AY+SEI R+ I +I GQ +A Sbjct: 61 RGTPLLVQIFLIYFALPMAIGQRVEPFIAAVAACGINSGAYVSEIFRAGIQAIDVGQMEA 120 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++GLT QT+R IILPQ PL +EFI++LK +S+ S I E+ + Q I++ Sbjct: 121 GRSLGLTWWQTMRFIILPQAFKNILPPLGNEFIAMLKDSSLVSVIGFEELTRRGQLIIAQ 180 Query: 185 TYQPLIIYCELAFVYLILT 203 TY I+ +A +YLI+T Sbjct: 181 TYGSFEIWMTVAVLYLIMT 199 >gi|150015936|ref|YP_001308190.1| polar amino acid ABC transporter inner membrane subunit [Clostridium beijerinckii NCIMB 8052] gi|149902401|gb|ABR33234.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium beijerinckii NCIMB 8052] Length = 213 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 124/212 (58%), Gaps = 11/212 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ PQ+L + VTL I ++ V+S+ +G IAV+R S I+ I Y+ I RGT Sbjct: 4 ILEIMPQVL-EGLQVTLEIFVLTLVLSIPLGVIIAVMRTSKS-LILKQISGIYILIMRGT 61 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+Q+ VIF+GLP +GI FD F A I++ TLN+ AY EI R+ I SI GQ + + + Sbjct: 62 PLLLQIIVIFFGLPLVGISFDRFPAAILAFTLNYGAYFGEIFRAGIESIDNGQVEGAKVL 121 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ----TAQRIVST 184 GL+ KQT IILPQ T P+++E +++K TS+ + + E+ + A R VS Sbjct: 122 GLSSKQTFFRIILPQAFKTVMPPVANEITTLVKDTSLVYVVGMDELLKIGKTAANRDVSL 181 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 PL+I + VYL++ + + KIE Sbjct: 182 V--PLLI---VGAVYLVVIAIFSQVLKKIEEK 208 >gi|94986057|ref|YP_605421.1| amino acid ABC transporter permease [Deinococcus geothermalis DSM 11300] gi|94556338|gb|ABF46252.1| amino acid ABC transporter membrane protein, PAAT family [Deinococcus geothermalis DSM 11300] Length = 231 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 62/170 (36%), Positives = 108/170 (63%), Gaps = 1/170 (0%) Query: 34 ISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVA 93 +S+++G + V R+F ++ + + YV + RG PL+V L V++YGLP +G+ SF A Sbjct: 37 VSVMVGTLLGVARVF-RMPLLGWLGNIYVEVVRGIPLIVLLSVVYYGLPALGLTLASFPA 95 Query: 94 IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS 153 +++L L +AY SEI+R + S+P GQ +A+ ++GL+R +R+++LPQ + L Sbjct: 96 AVLALGLYSAAYTSEIVRGGLGSVPIGQIEAARSLGLSRAGALRYVVLPQAWRVALPALG 155 Query: 154 SEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +EFIS++ +S+AS +T+ E+F + I TY+ +Y LA +Y +LT Sbjct: 156 NEFISLILGSSLASAVTLQELFAQGKYITGVTYRQFEVYAVLALIYFLLT 205 >gi|255526252|ref|ZP_05393169.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] gi|296186246|ref|ZP_06854650.1| ABC transporter, permease protein [Clostridium carboxidivorans P7] gi|255510032|gb|EET86355.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] gi|296049047|gb|EFG88477.1| ABC transporter, permease protein [Clostridium carboxidivorans P7] Length = 223 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 83/223 (37%), Positives = 129/223 (57%), Gaps = 14/223 (6%) Query: 7 NLIIDSFPQLL-YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI---MHFYV 62 N ++ FP LL Y + ++L + IS+I+G IA+I + + I LI + Y+ Sbjct: 8 NYMMGIFPLLLKYTHLTISLAL------ISMILGLSIALILVIILNYDIKLINPLLKVYI 61 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FRGTPLLVQLF+++YGLP I + +++ A II L++N SAY+ EI+R +I S+ K Sbjct: 62 SFFRGTPLLVQLFLLYYGLPQIIPILKNINAYTAAIIGLSMNSSAYMVEILRGAIGSVDK 121 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A A+G+T Q ++ I+LPQ + L + F+ +LKS+S+A T+ + EI AQ Sbjct: 122 GQMEAVKALGMTSWQGMKRIVLPQAARVAIPALGNTFVDLLKSSSLAFTLGVAEILAQAQ 181 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 + TY+ Y +A +Y ++ F IQ KI H Y Sbjct: 182 MSAAATYKFFENYLAVALIYWVIIIFFNHIQ-KILEVRMNHAY 223 >gi|295396899|ref|ZP_06807023.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Aerococcus viridans ATCC 11563] gi|294974833|gb|EFG50536.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Aerococcus viridans ATCC 11563] Length = 484 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 113/189 (59%), Gaps = 2/189 (1%) Query: 29 CISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF 88 I +IS+ IGF I ++R+F + I+ YV+I RG+PL++QL VIF+GLP+IGI Sbjct: 296 AIVLIISVPIGFLIGILRVF-GPKWLQAIIEAYVFIMRGSPLMLQLMVIFFGLPYIGIAM 354 Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 D F A +++ +N++AY +EI R I ++P GQ+++ +G+ + + R IILPQ + Sbjct: 355 DRFPAAVLAYVINYAAYFAEIFRGGISAVPDGQYESISVLGIGKMRGFRRIILPQVVNIV 414 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 + +E IS++K TS+ I + E+ + A I + TY L Y +YLI+T+ Sbjct: 415 LPSIGNEVISLVKDTSLVYVIGLGELLR-AGNIAANTYASLAPYLVAGAIYLIVTAVLTF 473 Query: 209 IQIKIESSV 217 + K E+ + Sbjct: 474 VLRKFENQL 482 >gi|120401318|ref|YP_951147.1| polar amino acid ABC transporter inner membrane subunit [Mycobacterium vanbaalenii PYR-1] gi|119954136|gb|ABM11141.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter ATP-binding protein, PAAT family [Mycobacterium vanbaalenii PYR-1] Length = 510 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 115/199 (57%), Gaps = 1/199 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++ TL + F L +G +A +++ S + + I YV I+RGTPL++QL +F Sbjct: 16 GMLFTLQLTLYGFTGGLFLGVLLAALQLTRSRALTA-IGRTYVVIYRGTPLILQLVFVFT 74 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 LPHIGI A ++L +N + +ISEI+RS I + GQ A A+GL ++ +R + Sbjct: 75 ALPHIGITLPPVAAGSVALAMNEAVFISEILRSGIKGVDPGQSLAGRALGLEPRKLMRRV 134 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I PQ + L +EFIS +K++++AS I +PE+ Q++ S+T+ IY A +Y Sbjct: 135 IAPQAFRSMVPALGNEFISTMKNSALASVIAVPELTLRTQQLASSTFDYFSIYFATAVMY 194 Query: 200 LILTSFCYIIQIKIESSVT 218 L LT+ IIQ+ +E ++ Sbjct: 195 LALTAVLSIIQLLLEDALN 213 >gi|116512613|ref|YP_811520.1| amino acid ABC transporter permease/periplasmic protein [Lactococcus lactis subsp. cremoris SK11] gi|116108267|gb|ABJ73407.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactococcus lactis subsp. cremoris SK11] Length = 714 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 120/202 (59%), Gaps = 8/202 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++VTL +A +SF++++I+G + + S I+ I YV + R PLLV IFY Sbjct: 510 GLLVTLELAVLSFILAMIVGIIFGLFSVAPS-KILRTIARIYVDLNRSIPLLVLTIFIFY 568 Query: 80 GLPHIGIV-------FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 G+P++ + + F A +I+LTLN SAYI+EI+RS + ++P GQ +AS ++G+T Sbjct: 569 GIPNLLQIITGHQSPLNEFTAGVIALTLNSSAYIAEIVRSGVQAVPSGQMEASRSLGVTY 628 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 ++R +ILPQ I + L ++FI LK T++ S I + E+ QT Q IV+ +Q +Y Sbjct: 629 LTSMRKVILPQAIKITIPSLINQFIITLKDTTLVSVIGLVELLQTGQIIVARNFQAFRVY 688 Query: 193 CELAFVYLILTSFCYIIQIKIE 214 + VY+I+ F + ++E Sbjct: 689 GLIGLVYMIVLLFLMWVGRRVE 710 >gi|125624721|ref|YP_001033204.1| glutamine ABC transporter permease and substrate binding protein [Lactococcus lactis subsp. cremoris MG1363] gi|62421458|gb|AAX82492.1| GlnP [Lactococcus lactis subsp. cremoris MG1363] gi|124493529|emb|CAL98510.1| glutamine ABC transporter permease and substrate binding protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071518|gb|ADJ60918.1| glutamine ABC transporter permease and substrate binding protein [Lactococcus lactis subsp. cremoris NZ9000] Length = 714 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 120/202 (59%), Gaps = 8/202 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++VTL +A +SF++++I+G + + S I+ I YV + R PLLV IFY Sbjct: 510 GLLVTLELAVLSFILAMIVGIIFGLFSVAPS-KILRTIARIYVDLNRSIPLLVLTIFIFY 568 Query: 80 GLPHIGIV-------FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 G+P++ + + F A +I+LTLN SAYI+EI+RS + ++P GQ +AS ++G+T Sbjct: 569 GIPNLLQIITGHQSPLNEFTAGVIALTLNSSAYIAEIVRSGVQAVPSGQMEASRSLGVTY 628 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 ++R +ILPQ I + L ++FI LK T++ S I + E+ QT Q IV+ +Q +Y Sbjct: 629 LTSMRKVILPQAIKITIPSLINQFIITLKDTTLVSVIGLVELLQTGQIIVARNFQAFRVY 688 Query: 193 CELAFVYLILTSFCYIIQIKIE 214 + VY+I+ F + ++E Sbjct: 689 GLIGLVYMIVLLFLMWVGRRVE 710 >gi|332800504|ref|YP_004462003.1| polar amino acid ABC transporter, inner membrane subunit [Tepidanaerobacter sp. Re1] gi|332698239|gb|AEE92696.1| polar amino acid ABC transporter, inner membrane subunit [Tepidanaerobacter sp. Re1] Length = 214 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 122/211 (57%), Gaps = 3/211 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F I+ P LL + + VTL + ++ VIS+ +G +A+ R+ ++ L+ Y+W+ Sbjct: 2 FEYILRLLPALL-SGLEVTLKVFFLTLVISIPLGILVALGRLSKIKPLVFLV-ELYIWVM 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLL+Q+ VIF+GLP +GI FD F A I++ LN++AY EI R I SI KGQ+DA+ Sbjct: 60 RGTPLLLQIVVIFFGLPIVGITFDRFPAAILAFVLNYAAYFGEIFRGGIESIDKGQYDAA 119 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +G T +T IILPQ I +++E I+++K TS+ + + E+ + A +I S Sbjct: 120 KVLGFTPVKTFTRIILPQMIKIVLPSVANEVITLVKDTSLVYVVGLGELLR-AGKIASNR 178 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 L+ + YL LT+ + K+E Sbjct: 179 DASLVPLIVVGVFYLALTAVLTAVFQKLEDR 209 >gi|326803632|ref|YP_004321450.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] gi|326651009|gb|AEA01192.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] Length = 497 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 114/181 (62%), Gaps = 2/181 (1%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS 97 +GF IA++R+F S +I ++ YV+I RG+PL++QL ++F+GLP++GI D F A +I+ Sbjct: 318 LGFLIAIMRVF-SPKLIQWLIEGYVFIMRGSPLMLQLMMVFFGLPYLGINLDRFTAALIA 376 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 +N++AY +EI R I S+P+GQ+++ +G+ ++ R IILPQ + + + +E I Sbjct: 377 FVVNYAAYFAEIFRGGITSVPQGQYESIKVLGIGWQRGFRRIILPQVMKITLPSVGNEVI 436 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +++K TS+ I + E+ + A I + TY +I Y YLI T+F + +IE V Sbjct: 437 ALVKDTSLVYVIGLGELLR-AGSIAANTYATIIPYLVCGVFYLIFTAFVTLALRRIEYRV 495 Query: 218 T 218 + Sbjct: 496 S 496 >gi|257875562|ref|ZP_05655215.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|257809728|gb|EEV38548.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] Length = 712 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 78/199 (39%), Positives = 118/199 (59%), Gaps = 12/199 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIFYG 80 TL +A ISF ++L+IG + FS I + F YV I RG P++V F IF+G Sbjct: 518 TLLLALISFALALVIGIIFGL----FSVAPIKALRVFAGIYVDIIRGIPMMVLAFFIFFG 573 Query: 81 LPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 L IGI F A +I+LTLN SAYI+EI+R I ++PKGQ +AS ++G+T +T++ I Sbjct: 574 LSDAIGITIPDFAAGVITLTLNASAYIAEIVRGGINAVPKGQMEASRSLGMTYTRTMQKI 633 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ I ++F+ LK T++ S I + E+ QT + IV+ T Q +Y +A +Y Sbjct: 634 ILPQAIKIMIPSFVNQFVISLKDTTIISVIGVVELLQTGKIIVARTTQSTYVYLIIAIIY 693 Query: 200 LI----LTSFCYIIQIKIE 214 L+ LT +++ K++ Sbjct: 694 LVVITALTKLAKVLEKKVK 712 >gi|22537749|ref|NP_688600.1| amino acid ABC transporter permease [Streptococcus agalactiae 2603V/R] gi|76787814|ref|YP_330227.1| polar amino acid ABC transporter permease [Streptococcus agalactiae A909] gi|76798453|ref|ZP_00780691.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 18RS21] gi|22534640|gb|AAN00473.1|AE014265_2 amino acid ABC transporter, permease protein [Streptococcus agalactiae 2603V/R] gi|76562871|gb|ABA45455.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus agalactiae A909] gi|76586187|gb|EAO62707.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 18RS21] Length = 221 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 70/206 (33%), Positives = 128/206 (62%), Gaps = 4/206 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 L + +FP ++ + T+ ++ + F++ I+GFF+A++++ ++ + + ++ + Sbjct: 10 LELAVKAFPSVI-QGLPYTIGLSLVGFILGAIVGFFVALMKMSHF-RLLRYLANIHISLM 67 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG PL+V LF+I++GLP IGI D+ A I+ T+ SAYISEIIR++++++ GQW+A+ Sbjct: 68 RGIPLMVLLFLIYFGLPFIGIQLDAVTASIVGFTMMSSAYISEIIRAALLAVDHGQWEAA 127 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL R II+PQ + LS+ + ++KS+S+ + IT+P+IF A +IV T Sbjct: 128 RALGLKTPTIYRGIIIPQATRIALPSLSNVLLDMVKSSSLTAMITVPDIFNNA-KIVGGT 186 Query: 186 YQP-LIIYCELAFVYLILTSFCYIIQ 210 Y + Y +A +Y ++ + IIQ Sbjct: 187 YSDYMTAYILVALIYWVICTLYAIIQ 212 >gi|315173030|gb|EFU17047.1| ABC transporter, permease protein [Enterococcus faecalis TX1346] Length = 722 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 78/198 (39%), Positives = 123/198 (62%), Gaps = 9/198 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS---LIMHFYVWIFRG 67 +++ QLL+ + +T+ + I FV++LI+G VI FS + I ++ YV + RG Sbjct: 516 NNWKQLLHG-LWMTILLTLICFVLALIVG----VIFGLFSVSPIKALRVLSTIYVDLIRG 570 Query: 68 TPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PL+V F I++GLP + G F+A II+LTLN SAYISEI+R I ++P GQ +AS Sbjct: 571 IPLMVLAFFIYFGLPGVLGFNIPVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASR 630 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ +T++ IILPQ I ++F+ LK T++ S I + E+ QT + IV+ T Sbjct: 631 SLGLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTL 690 Query: 187 QPLIIYCELAFVYLILTS 204 Q ++Y +A +YLIL + Sbjct: 691 QSTMVYFVIALIYLILIT 708 >gi|281492351|ref|YP_003354331.1| glutamine ABC transporter permease/substrate-binding protein [Lactococcus lactis subsp. lactis KF147] gi|281376015|gb|ADA65506.1| Glutamine ABC transporter, permease and substrate-binding protein [Lactococcus lactis subsp. lactis KF147] Length = 714 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 120/202 (59%), Gaps = 8/202 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++VTL +A +SF++++I+G + + S I+ I YV + R PLLV IFY Sbjct: 510 GLLVTLELAILSFILAMIVGIIFGLFSVAPS-KILRTIARIYVDLNRSIPLLVLTIFIFY 568 Query: 80 GLPHIGIV-------FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 G+P++ + + F A +I+LTLN SAYI+EI+RS + ++P GQ +AS ++G+T Sbjct: 569 GIPNLLQIITGHQSPLNEFTAGVIALTLNSSAYIAEIVRSGVQAVPSGQMEASRSLGVTY 628 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 ++R +ILPQ I + L ++FI LK T++ S I + E+ QT Q IV+ +Q +Y Sbjct: 629 LTSMRKVILPQAIKITIPSLINQFIITLKDTTLVSVIGLVELLQTGQIIVARNFQAFRVY 688 Query: 193 CELAFVYLILTSFCYIIQIKIE 214 + VY+I+ F + ++E Sbjct: 689 GLIGLVYMIVLLFLMWVGRRVE 710 >gi|260771045|ref|ZP_05879973.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP 102972] gi|260613934|gb|EEX39125.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP 102972] gi|315178628|gb|ADT85542.1| amino acid ABC transporter, permease protein [Vibrio furnissii NCTC 11218] Length = 223 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 120/201 (59%), Gaps = 8/201 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ +A +LI+ +A IR+F +++ + Y+ FRGTPLLVQ+F+++YGLP Sbjct: 22 TMEMAVWGMFFALILSVLLANIRVF-KVPVLNALSQLYISFFRGTPLLVQMFLLYYGLPQ 80 Query: 84 I-----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 I GI D+F A +I LTL+F+AY++E IR++II I + Q +AS ++G+T Q +R Sbjct: 81 IFPLLIGI--DAFSAAVIGLTLHFAAYMAETIRAAIIGIDRSQMEASLSVGMTTGQAMRR 138 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 IILPQ + L + FI ++KSTS+A T + EI AQ S++++ + +A + Sbjct: 139 IILPQASRVALPSLMNYFIDMIKSTSLAFTFGVAEIMAKAQMEASSSFRFFEAFLAVALI 198 Query: 199 YLILTSFCYIIQIKIESSVTQ 219 Y + +QI E+ + + Sbjct: 199 YWAVVMVLTRVQIWAENKLNK 219 >gi|94985165|ref|YP_604529.1| amino acid ABC transporter permease [Deinococcus geothermalis DSM 11300] gi|94555446|gb|ABF45360.1| amino acid ABC transporter membrane protein, PAAT family [Deinococcus geothermalis DSM 11300] Length = 263 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 119/201 (59%), Gaps = 7/201 (3%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + +S +I L++G ++R S I ++W RGTPLLVQ+ ++ LP Sbjct: 59 MTLQLTLVSGLIGLLVGIVAGIMRTS-SLWIARAPAGLFIWFIRGTPLLVQILFVYNALP 117 Query: 83 ------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 + + D F + +I+L LN AY +E+IR+ I+++P+GQ +A+ ++GL+ QT+ Sbjct: 118 PLLAAIGLKVELDEFWSAVIALALNVGAYNAEVIRAGILAVPRGQVEAARSLGLSGVQTM 177 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 R ++LPQ + PL + +++LK +S+ASTI++ E+ R+ S T+QP+ + +A Sbjct: 178 RTVVLPQALRIVVPPLVNNLVALLKDSSLASTISLLELTLAGSRVSSETFQPVPVLTTIA 237 Query: 197 FVYLILTSFCYIIQIKIESSV 217 VYL LT+ + ++E V Sbjct: 238 AVYLALTTVMTLFTDQLEKRV 258 >gi|297582812|ref|YP_003698592.1| polar amino acid ABC transporter inner membrane subunit [Bacillus selenitireducens MLS10] gi|297141269|gb|ADH98026.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus selenitireducens MLS10] Length = 227 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 123/201 (61%), Gaps = 1/201 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL I+ IS V+ L++ F+A+ R + + Y+ RG P+L+ LF++++ Sbjct: 25 GLTLTLYISLISMVLGLVMSLFLALARQS-GHLYLQIPARMYISFMRGVPILIILFMLYF 83 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G P+IGI F + A II + N +AY++EI RS+I ++PKGQW+A+ ++GL+ + +R + Sbjct: 84 GFPYIGIEFTAVNAAIIGFSFNSAAYMAEINRSAIDAVPKGQWEAARSLGLSYTKMMRQV 143 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + PL++ + ++K++S+A+ IT+PEIFQ ++ + + ++ +A +Y Sbjct: 144 VLPQASRIAVPPLTNVLLDLIKASSLAAMITVPEIFQMSRIVAGREMDYMTMFILVAMIY 203 Query: 200 LILTSFCYIIQIKIESSVTQH 220 ++ + +Q +E ++ Sbjct: 204 WVICTLMTQLQNYLEKRFARY 224 >gi|114327541|ref|YP_744698.1| Gln/Arg/Lys/His-binding protein and permease [Granulibacter bethesdensis CGDNIH1] gi|114315715|gb|ABI61775.1| gln/Arg/Lys/His-binding protein and permease protein [Granulibacter bethesdensis CGDNIH1] Length = 503 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 63/176 (35%), Positives = 113/176 (64%), Gaps = 1/176 (0%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F L+ A V TL ++ ++ V+++ +G +AV R++ + ++ Y+ I RGTPLL Sbjct: 289 GFIPLIAHAAVTTLEVSLLAMVLAVAMGLLLAVSRLY-GPAPLRMLSVMYIEIMRGTPLL 347 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +Q+ +FYGLP++GI D F A +++L LN++AY +E R+ + ++P GQ++A+ A+ +T Sbjct: 348 IQVLFVFYGLPNLGIRLDPFFAGVLALGLNYAAYEAENYRAGLGAVPHGQYEAAIALNMT 407 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 Q +RH+++PQ ++++FIS LK +S+ S IT+ E+ QT R+ +T Y Sbjct: 408 SFQALRHVVIPQAFRLVIPVMTNDFISALKDSSLLSVITLSELSQTYVRLSTTYYD 463 >gi|325570015|ref|ZP_08145940.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] gi|325156843|gb|EGC69014.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] Length = 760 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 78/199 (39%), Positives = 118/199 (59%), Gaps = 12/199 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIFYG 80 TL +A ISF ++L+IG + FS I + F YV I RG P++V F IF+G Sbjct: 566 TLLLALISFALALVIGIIFGL----FSVAPIKALRVFAGIYVDIIRGIPMMVLAFFIFFG 621 Query: 81 LPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 L IGI F A +I+LTLN SAYI+EI+R I ++PKGQ +AS ++G+T +T++ I Sbjct: 622 LSDAIGITIPDFAAGVITLTLNASAYIAEIVRGGINAVPKGQMEASRSLGMTYTRTMQKI 681 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ I ++F+ LK T++ S I + E+ QT + IV+ T Q +Y +A +Y Sbjct: 682 ILPQAIKIMIPSFVNQFVISLKDTTIISVIGVVELLQTGKIIVARTTQSTYVYLIIAIIY 741 Query: 200 LI----LTSFCYIIQIKIE 214 L+ LT +++ K++ Sbjct: 742 LVVITALTKLAKVLEKKVK 760 >gi|315605386|ref|ZP_07880429.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315312955|gb|EFU61029.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 219 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 120/219 (54%), Gaps = 2/219 (0%) Query: 6 FNL-IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 NL I+ + L A ++TL IA I V SL +G +A IR + + + I YV + Sbjct: 1 MNLDILARYAPLYVDAAILTLRIAAIGIVGSLAVGLLVAAIR-QYRIPLAAQIGAAYVEL 59 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 R TPLLVQLF I++GLP +GI + I+ L AY++E +RS + SI QW++ Sbjct: 60 SRNTPLLVQLFFIYFGLPRVGIKWSGETCAIVGLIFLGGAYMAEALRSGLDSIATIQWES 119 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+GLT QT+RH+ LPQ I TS PL++ I ++K TSV S + +P++ A+ ++ Sbjct: 120 ASALGLTPAQTLRHVALPQAIATSVPPLAANVIFLIKETSVVSVVALPDLVYVAKDLIGM 179 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 +Y L YL++ I IE +V + + Sbjct: 180 SYNTSEALALLIIAYLVILLPVSIAARLIEKAVRRGGFG 218 >gi|304438666|ref|ZP_07398604.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368315|gb|EFM22002.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 214 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 62/180 (34%), Positives = 115/180 (63%), Gaps = 5/180 (2%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-FFSDTIISLIMHFYVWIFRGTPLLVQ 73 +L+ +TL I C++ +SL +G F+A+ R+ F +S I+ Y+WI RGTPL++Q Sbjct: 9 RLMLEGSGITLEIFCVTLALSLPLGLFVALGRLSRFRP--LSRILEIYIWIMRGTPLMLQ 66 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 L +++ LP +GI+ A +++ LN++AY +EI R+ I ++P+GQ++A+ +G++ Sbjct: 67 LLFVYFALPMVGILLPDIAAALLAFVLNYAAYFAEIFRAGIQAVPRGQFEAARVLGMSGP 126 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLII 191 T+R IILPQ + + P+S+E I+++K TS+ + + ++ + A+ IV + PL+I Sbjct: 127 LTMRRIILPQVLRITLPPVSNETINLVKDTSLVYILAMNDLLRVARTIVQREFDMTPLLI 186 >gi|284043462|ref|YP_003393802.1| polar amino acid ABC transporter inner membrane subunit [Conexibacter woesei DSM 14684] gi|283947683|gb|ADB50427.1| polar amino acid ABC transporter, inner membrane subunit [Conexibacter woesei DSM 14684] Length = 335 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 82/240 (34%), Positives = 134/240 (55%), Gaps = 22/240 (9%) Query: 2 KYEWFNLIIDS-FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++EW N++ D F + +V+T+ I + V ++IG +AV+R+ + +++ + F Sbjct: 57 RFEW-NVVGDYLFDPRVMDGVVLTIEITIAAMVAGVLIGVLLAVMRLS-PNPLVAAVAGF 114 Query: 61 YVWIFRGTPLLVQLF----------VIFYGLPHIG---IVFDS------FVAIIISLTLN 101 YVWIFRGTP+LVQL I G+P I I D+ FV ++ L LN Sbjct: 115 YVWIFRGTPVLVQLLFWNFIAALYPEIDLGIPFIAPDLISLDANTFITPFVVALLGLGLN 174 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 AY++EI+R+ ++S+ +GQ AS A+G+TR QT+R I+LPQ + P +E IS+LK Sbjct: 175 EGAYMAEIVRAGVLSVDEGQTHASQALGMTRLQTMRRIVLPQAMRVIIPPTGNETISMLK 234 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 +TS+ S I E+ +Q I S Y+ + + + YL++T+ I Q +E + T Sbjct: 235 TTSLVSVIAYAELLYASQLIYSENYRTIQLLIVASIWYLVMTTVLTIGQAWLERRFGRGT 294 >gi|157362892|ref|YP_001469659.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga lettingae TMO] gi|157313496|gb|ABV32595.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga lettingae TMO] Length = 222 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/173 (43%), Positives = 109/173 (63%), Gaps = 7/173 (4%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGTPLLVQLFV 76 A++ TL IA IS ++ IG + F S+T ++ ++ FY R TPLLVQL+ Sbjct: 18 ALLETLKIAIISCFFAISIGTIVG----FLSNTRSRLLRTLIEFYTGFIRSTPLLVQLYF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 + YGLP + I+ F + I+ +LN AYISEIIR + SI GQ++A+Y++GL+R QTI Sbjct: 74 VHYGLPILNIMPTRFQSATITFSLNTGAYISEIIRGGLQSINIGQFEAAYSLGLSRFQTI 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 R II PQ PL S+F ++K TS+A+ +TIPE+ A+R +TTY+PL Sbjct: 134 RLIIFPQLFRIVLPPLVSQFSYLIKDTSLAAVLTIPELTYMARRAAATTYRPL 186 >gi|84394507|ref|ZP_00993217.1| amino acid ABC transproter, permease protein [Vibrio splendidus 12B01] gi|84374860|gb|EAP91797.1| amino acid ABC transproter, permease protein [Vibrio splendidus 12B01] Length = 223 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 76/218 (34%), Positives = 128/218 (58%), Gaps = 9/218 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN ++ P LL + T+ +A +LI+ +A IR+F ++ + Y+ F Sbjct: 5 FNYMLGLLPILL-KYLGTTMEMAIWGLFFALILSLILANIRVF-KIPVLDQLSQLYISFF 62 Query: 66 RGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQLF+++YGLP + + D+F A +I LTL+F+AY++E IR++II I + Q Sbjct: 63 RGTPLLVQLFLLYYGLPQVFPWMVGLDAFGAAVIGLTLHFAAYMAESIRAAIIGIDRSQM 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G+T Q +R +ILPQ + L + FI ++KSTS+A T+ + EI AQ Sbjct: 123 EASLSVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEA 182 Query: 183 STTYQPLIIYCELAFVY----LILTSFCYIIQIKIESS 216 S++++ + +A +Y +ILT ++K+ + Sbjct: 183 SSSFRFFEAFLAVALIYWGVVVILTRIQIWAEVKLNKA 220 >gi|329908118|ref|ZP_08274834.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Oxalobacteraceae bacterium IMCC9480] gi|327546759|gb|EGF31696.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Oxalobacteraceae bacterium IMCC9480] Length = 260 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 119/212 (56%), Gaps = 3/212 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W I Q VT+ + ++ VI +++G A+ ++ S + FY+W Sbjct: 42 WLPEPIGPAAQQFAEGARVTVALTLVAGVIGIVLGMLAALGKLS-SFLPLRWAAGFYIWA 100 Query: 65 FRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQ+ +F LP + G+ F + +++L N AY +E IRS I+++ KGQ Sbjct: 101 IRGTPLLVQVLFVFLALPALVPGLQLSDFYSAVVALAFNAGAYNAEAIRSGILAVHKGQA 160 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ ++GL+ QT R ++ PQ++ + PL + F+S+LK +S+A I + E+ RI Sbjct: 161 EAARSLGLSPFQTFRDVVFPQSMRIALPPLVNNFVSLLKDSSLAYVIGVVELSNIGNRIQ 220 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S T+QP+ ++ +A +YLILTS I IE Sbjct: 221 SVTFQPIPVFVTVAAIYLILTSVMTQISGAIE 252 >gi|323143936|ref|ZP_08078594.1| glutamine ABC transporter permease protein [Succinatimonas hippei YIT 12066] gi|322416300|gb|EFY06976.1| glutamine ABC transporter permease protein [Succinatimonas hippei YIT 12066] Length = 218 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 77/200 (38%), Positives = 124/200 (62%), Gaps = 7/200 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWI 64 +LIIDS P LL +VT+ I ++ + +IG F+ + + ++ I S I YV Sbjct: 8 SLIIDSLP-LLGIGALVTIEITAVAVALGTLIGLFVGIAELSRYWYFRIPSKI---YVDF 63 Query: 65 FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RGTPLLVQ+F+I++ LP I G+ + FVA + + ++N AY++EI R+ I SI KGQ + Sbjct: 64 IRGTPLLVQIFIIYFALPIILGVRVEPFVAAVAACSINSGAYVAEIFRAGIQSIDKGQME 123 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A ++G++ QT+ HI++PQ L +EFI++LK +S+ S I E+ + Q I++ Sbjct: 124 AGRSLGMSWGQTMIHIVIPQAFRRIIPQLGNEFIAMLKDSSLVSVIGFEELTRKGQLIIA 183 Query: 184 TTYQPLIIYCELAFVYLILT 203 +TY L I+ +A +YLI+T Sbjct: 184 STYGSLEIWTAVAIIYLIMT 203 >gi|119898556|ref|YP_933769.1| amino acid permease [Azoarcus sp. BH72] gi|119670969|emb|CAL94882.1| conserved hypothetical amino acid permease [Azoarcus sp. BH72] Length = 217 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 67/192 (34%), Positives = 113/192 (58%), Gaps = 4/192 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ I+FV+ I+G I RI + + Y+ +F+GTPLL+QLF++F+GL Sbjct: 21 TLALSLIAFVLGGIVGLAILFARIS-KNRALQAFTKGYIEVFQGTPLLMQLFIVFFGLSL 79 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +GI ++A LTL SAY++EI R + ++PKGQW+AS ++ L+ Q +RH+ILPQ Sbjct: 80 LGIDVSPWIAAAAGLTLFTSAYLAEIWRGCVEAVPKGQWEASSSLALSYAQQMRHVILPQ 139 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T+V S I E+ +T + + T+QP +++ +A Y L Sbjct: 140 ALRIAVAPTVGFSVQVVKGTAVTSIIGFAELTKTGSMLANATFQPFMVFGLVAAGYFAL- 198 Query: 204 SFCYIIQIKIES 215 CY + + +S Sbjct: 199 --CYPLSLYAKS 208 >gi|300362597|ref|ZP_07058773.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] gi|300353588|gb|EFJ69460.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] Length = 537 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 121/212 (57%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF---------FSDT 52 K WF I+ + ++ + +TL +A + ++ IG + ++R + Sbjct: 285 KENWFMSIMHRYGSMILGGVGMTLLLALVGTIVGFFIGLLVGIVRTIPTPKSTGKKWGLK 344 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 I+ I+ Y+ +FRGTP++VQ VI+YG+ + + + VA ++ +++N AY++E+IR Sbjct: 345 IVDWILAVYIEVFRGTPMMVQAAVIYYGIAQLWHLNLNRTVAALVIVSINTGAYLAEVIR 404 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I + PKGQ++A+ AIG+T Q + HIILPQ I +++EFI +K TSV S I++ Sbjct: 405 GGINATPKGQFEAASAIGMTHSQQMWHIILPQAIRNCLPSITNEFIVNIKDTSVLSIISV 464 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F + S T+Q Y ++ +YLILT Sbjct: 465 SELFFVGTTVASQTFQFFQTYFIISMIYLILT 496 >gi|257869222|ref|ZP_05648875.1| amino acid ABC transporter [Enterococcus gallinarum EG2] gi|257803386|gb|EEV32208.1| amino acid ABC transporter [Enterococcus gallinarum EG2] Length = 718 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 81/208 (38%), Positives = 123/208 (59%), Gaps = 12/208 (5%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLL 71 ++L + TL +A ISF ++LIIG + + FS + I + F YV I RG P++ Sbjct: 515 KVLLKGLWNTLLLALISFALALIIGIILGL----FSVSPIRALRIFAGIYVDIIRGIPMM 570 Query: 72 VQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 V F IF+GL IGI F A +I+LTLN SAYI+EI+R I ++P GQ +AS ++GL Sbjct: 571 VLAFFIFFGLSDAIGITIPDFAAGVITLTLNASAYIAEIVRGGIKAVPVGQMEASRSLGL 630 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T +T++ IILPQ I ++F+ LK T++ S I + E+ QT + IV+ T Q Sbjct: 631 TYTRTMQKIILPQAIKIMIPSFVNQFVISLKDTTIISVIGVVELLQTGKIIVARTTQSTY 690 Query: 191 IYCELAFVYLI----LTSFCYIIQIKIE 214 +Y +A +YLI LT +++ K++ Sbjct: 691 VYLIVAVMYLIVITALTKLAKVLEKKVK 718 >gi|238852979|ref|ZP_04643378.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus gasseri 202-4] gi|282852417|ref|ZP_06261759.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] gi|311111395|ref|ZP_07712792.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Lactobacillus gasseri MV-22] gi|238834429|gb|EEQ26667.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus gasseri 202-4] gi|282556159|gb|EFB61779.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] gi|311066549|gb|EFQ46889.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Lactobacillus gasseri MV-22] Length = 537 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 121/212 (57%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF---------FSDT 52 K WF I+ + ++ + +TL +A + ++ IG + ++R + Sbjct: 285 KENWFMSIMHRYGSMILGGVGMTLLLALVGTIVGFFIGLLVGIVRTIPTPKSTGKKWGLK 344 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 I+ I+ Y+ +FRGTP++VQ VI+YG+ + + + VA ++ +++N AY++E+IR Sbjct: 345 IVDWILAVYIEVFRGTPMMVQAAVIYYGIAQLWHLNLNRTVAALVIVSINTGAYLAEVIR 404 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I + PKGQ++A+ AIG+T Q + HIILPQ I +++EFI +K TSV S I++ Sbjct: 405 GGINATPKGQFEAASAIGMTHSQQMWHIILPQAIRNCLPSITNEFIVNIKDTSVLSIISV 464 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F + S T+Q Y ++ +YLILT Sbjct: 465 SELFFVGTTVASQTFQFFQTYFIISMIYLILT 496 >gi|306825868|ref|ZP_07459207.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432229|gb|EFM35206.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 522 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 120/203 (59%), Gaps = 11/203 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISLIMHFY 61 +++ QLL A VTL I+ I ++ LIIG I V R I+ ++ I++ Y Sbjct: 288 ENWQQLLRGA-GVTLLISIIGTIVGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVY 346 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R I+++ KG Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILAVDKG 406 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 407 QFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNT 466 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + + TYQ + +A +Y +LT Sbjct: 467 VATQTYQYFQTFTIIAVIYFVLT 489 >gi|25011698|ref|NP_736093.1| hypothetical protein gbs1658 [Streptococcus agalactiae NEM316] gi|24413238|emb|CAD47317.1| Unknown [Streptococcus agalactiae NEM316] Length = 221 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 127/206 (61%), Gaps = 4/206 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 L + +FP ++ + T+ ++ + F++ I+GFF+A++++ ++ + + ++ + Sbjct: 10 LELAVKAFPSVI-QGLPYTIGLSLVGFILGAIVGFFVALMKMSHL-RLLRYLANIHISLM 67 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG PL+V LF+I++GLP IGI D+ A I+ T+ SAYISEIIR++++++ GQW+A+ Sbjct: 68 RGIPLMVLLFLIYFGLPFIGIQLDAVTASIVGFTMMSSAYISEIIRAALLAVDHGQWEAA 127 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL R II+PQ + LS+ + ++K +S+ + IT+P+IF A +IV T Sbjct: 128 RALGLKTPTIYRGIIIPQATRIALPSLSNVLLDMVKGSSLTAMITVPDIFNNA-KIVGGT 186 Query: 186 YQP-LIIYCELAFVYLILTSFCYIIQ 210 Y + Y +A +Y ++ + IIQ Sbjct: 187 YSDYMTAYILVALIYWVICTLYAIIQ 212 >gi|50121893|ref|YP_051060.1| ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49612419|emb|CAG75869.1| ABC transporter permease protein [Pectobacterium atrosepticum SCRI1043] Length = 221 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 119/204 (58%), Gaps = 4/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y+W F+L+ D+ P LL + VTL + I+ V+ +G + + R+F +SL Sbjct: 1 MHYQWDFSLVWDNIPVLL-KGLGVTLELWLIAGVLGTALGLVLGIFRVF-GKRWLSLPAR 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 F+V IFR TP+L+QL +Y P +G+ F +F A +++LTL +AY +EI R+ + SI Sbjct: 59 FFVEIFRNTPVLIQLIWFYYAFPVLVGVQFSTFAAAVLALTLYSAAYCTEIFRAGLQSID 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQW+ + A+G+ +R ++LPQ + L++ I + K TS+AS + + E+ Sbjct: 119 HGQWEGAKALGMRHTVILRRVVLPQVLRNMLPALTNRMIELAKVTSLASILAVNELMYQG 178 Query: 179 QRIVSTTYQPLIIYCELAFVYLIL 202 + + ST Y+PL I +A +Y +L Sbjct: 179 RLLSSTYYRPLEILTVVALLYFVL 202 >gi|86360922|ref|YP_472809.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86285024|gb|ABC94082.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 281 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 123/206 (59%), Gaps = 1/206 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ P ++ ++ T+ ++ +S VI+ I AV ++ ++ I FY FRG Sbjct: 68 IVEKLPFMISQGLMTTIYVSAVSIVIASAIAILGAVAKLS-TNGFAYAIASFYTSFFRGL 126 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+Q+++I+ GLP +G V D+ A I++L+L + AY++EI RS I SI +GQW+AS +I Sbjct: 127 PLLMQVYLIYLGLPQLGFVIDAVPAGILALSLCYGAYMTEIFRSGIQSIDRGQWEASRSI 186 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G T+R IILPQ + P ++FIS+LK +S+ S I + E+ A+ + T+Q Sbjct: 187 GFGFGITMRKIILPQALPVIIPPTGNQFISMLKDSSLVSVIGVWELMFLARTLGQKTFQH 246 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIE 214 + + A +Y I++ +IQ +IE Sbjct: 247 MEMLISAAMLYWIMSIGLELIQARIE 272 >gi|327193169|gb|EGE60078.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium etli CNPAF512] Length = 324 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 122/206 (59%), Gaps = 1/206 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I + P ++ +V T+ ++ +S VI+ I AV ++ ++ I FY FRG Sbjct: 111 IAEKLPFMITQGLVTTIYVSAVSIVIASAIAILGAVAKLS-TNGFAYAIASFYTSFFRGL 169 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+Q+++I+ GLP +G V D+ A I++L+L + AY++EI RS I SI +GQW+AS +I Sbjct: 170 PLLMQVYLIYLGLPQLGFVIDAVPAGILALSLCYGAYMTEIFRSGIQSIDRGQWEASRSI 229 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G T+R IILPQ + P ++FIS+LK +S+ S I + E+ A+ + T+Q Sbjct: 230 GFGFGITMRKIILPQALPVIIPPTGNQFISMLKDSSLVSVIGVWELMFLARTLGQKTFQH 289 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIE 214 + + A +Y I++ +IQ +IE Sbjct: 290 MEMLISAAMLYWIMSIGLELIQARIE 315 >gi|254389017|ref|ZP_05004248.1| permease [Streptomyces clavuligerus ATCC 27064] gi|326443324|ref|ZP_08218058.1| permease [Streptomyces clavuligerus ATCC 27064] gi|197702735|gb|EDY48547.1| permease [Streptomyces clavuligerus ATCC 27064] Length = 313 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 125/218 (57%), Gaps = 21/218 (9%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + TL + +S I + G +AV+R+ + + S I FY+W FRGTP+LV Sbjct: 67 FDDRIVDGVKETLILTVLSMAIGIGGGILLAVMRLS-KNPVTSSIAWFYIWFFRGTPVLV 125 Query: 73 QLFVIFYGLPHIGIVFD----------------SFVAIIISLTLNFSAYISEIIRSSIIS 116 QLFV F ++G+VF+ F+ ++ L LN +AY++EI R+ ++S Sbjct: 126 QLFVWF----NLGLVFEYVNFGFYRDEWSDFMTPFLTALLGLGLNEAAYMAEICRAGLLS 181 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + +GQ +AS+A+G++ +T+R I++PQ + P +E I++LK+TS+ + + E+F+ Sbjct: 182 VDEGQTEASHALGMSHSKTLRRIVIPQAMRVIVPPTGNEVINMLKTTSLVAAVQFTELFR 241 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 AQ I T+ P+ ++ A YL+LTS + Q +E Sbjct: 242 QAQNIGQTSGAPVEMFFLAAAWYLVLTSVLSVGQYYLE 279 >gi|294814953|ref|ZP_06773596.1| permease [Streptomyces clavuligerus ATCC 27064] gi|294327552|gb|EFG09195.1| permease [Streptomyces clavuligerus ATCC 27064] Length = 351 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 125/218 (57%), Gaps = 21/218 (9%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + TL + +S I + G +AV+R+ + + S I FY+W FRGTP+LV Sbjct: 105 FDDRIVDGVKETLILTVLSMAIGIGGGILLAVMRLS-KNPVTSSIAWFYIWFFRGTPVLV 163 Query: 73 QLFVIFYGLPHIGIVFD----------------SFVAIIISLTLNFSAYISEIIRSSIIS 116 QLFV F ++G+VF+ F+ ++ L LN +AY++EI R+ ++S Sbjct: 164 QLFVWF----NLGLVFEYVNFGFYRDEWSDFMTPFLTALLGLGLNEAAYMAEICRAGLLS 219 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + +GQ +AS+A+G++ +T+R I++PQ + P +E I++LK+TS+ + + E+F+ Sbjct: 220 VDEGQTEASHALGMSHSKTLRRIVIPQAMRVIVPPTGNEVINMLKTTSLVAAVQFTELFR 279 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 AQ I T+ P+ ++ A YL+LTS + Q +E Sbjct: 280 QAQNIGQTSGAPVEMFFLAAAWYLVLTSVLSVGQYYLE 317 >gi|227485353|ref|ZP_03915669.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Anaerococcus lactolyticus ATCC 51172] gi|227236644|gb|EEI86659.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Anaerococcus lactolyticus ATCC 51172] Length = 524 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 75/205 (36%), Positives = 120/205 (58%), Gaps = 12/205 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----------FFSDTIISLIMH 59 + + L +V TL IA +S ++ IIG +A+IR F+ ++++++ Sbjct: 285 NKYSSLFLKGVVNTLFIAILSTILGFIIGLLVAIIRRIDVNKKTNPIGFYFHKLVNILLS 344 Query: 60 FYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV +FRGTP++VQ +IFYGL + I + A I+ +++N AY+SE++R I ++ Sbjct: 345 VYVEVFRGTPMMVQSVIIFYGLKQYFDIDLSTMFAAILIVSINTGAYLSEVVRGGINAVD 404 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ++A AIGLT Q + IILPQTI T L +EF+ +K TSV + I++ E+F + Sbjct: 405 SGQFEACKAIGLTNWQAMTGIILPQTIKTILPSLGNEFVINIKDTSVLNVISVTELFFMS 464 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT 203 + I +TYQ Y A +YL+LT Sbjct: 465 KSIAGSTYQYFPTYLITAVIYLVLT 489 >gi|171778684|ref|ZP_02919780.1| hypothetical protein STRINF_00632 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282641|gb|EDT48065.1| hypothetical protein STRINF_00632 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 228 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 125/213 (58%), Gaps = 12/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 Y +V + AC+ F IIG +A+++ + I++ I FYVW+FRGTP++VQ+ + Sbjct: 15 YGVLVTIMISACVVF-FGTIIGILVALVK-RTNIKILNWIASFYVWVFRGTPMVVQIMIA 72 Query: 78 FYGL-----PHIG-----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 F + P IG + F + II ++LN AYISEI+R+ I ++PKGQ +A+Y+ Sbjct: 73 FAWMHFSNAPTIGFGVLDLDFSRLLPGIIIISLNSGAYISEIVRAGIEAVPKGQLEAAYS 132 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ +R++ILPQ + L +EFI+I+K +S+ TI + E++ AQ +V+ TY Sbjct: 133 LGIRPVNAMRYVILPQALKNILPALGNEFITIIKDSSLLQTIGVMELWNGAQSVVTATYL 192 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P+ AF YL++T+ + K+E+ + Sbjct: 193 PITPLLFAAFYYLMVTTVLSFLLKKLENRMENG 225 >gi|77405794|ref|ZP_00782878.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] gi|77408475|ref|ZP_00785213.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] gi|77411932|ref|ZP_00788263.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] gi|77162029|gb|EAO73009.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] gi|77172917|gb|EAO76048.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] gi|77175581|gb|EAO78366.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] gi|319745516|gb|EFV97818.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus agalactiae ATCC 13813] Length = 221 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 127/206 (61%), Gaps = 4/206 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 L + +FP ++ + T+ ++ + F++ I+GFF+A++++ ++ + + ++ + Sbjct: 10 LELAVKAFPSVI-QGLPYTIGLSLVGFILGAIVGFFVALMKMSHF-RLLRYLANIHISLM 67 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG PL+V LF+I++GLP IGI D+ A I+ T+ SAYISEIIR++++++ GQW+A+ Sbjct: 68 RGIPLMVLLFLIYFGLPFIGIQLDAVTASIVGFTMMSSAYISEIIRAALLAVDHGQWEAA 127 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL R II+PQ + LS+ + ++K +S+ + IT+P+IF A +IV T Sbjct: 128 RALGLKTPTIYRGIIIPQATRIALPSLSNVLLDMVKGSSLTAMITVPDIFNNA-KIVGGT 186 Query: 186 YQP-LIIYCELAFVYLILTSFCYIIQ 210 Y + Y +A +Y ++ + IIQ Sbjct: 187 YSDYMTAYILVALIYWVICTLYAIIQ 212 >gi|21283528|ref|NP_646616.1| hypothetical protein MW1799 [Staphylococcus aureus subsp. aureus MW2] gi|49486677|ref|YP_043898.1| putative extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57650648|ref|YP_186741.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus COL] gi|87161641|ref|YP_494491.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195682|ref|YP_500488.1| ABC transporter permease [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221962|ref|YP_001332784.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus str. Newman] gi|161510076|ref|YP_001575735.1| amino acid ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142158|ref|ZP_03566651.1| amino acid ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253732516|ref|ZP_04866681.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|258452651|ref|ZP_05700650.1| amino acid ABC transporter [Staphylococcus aureus A5948] gi|282924191|ref|ZP_06331866.1| extracellular glutamine-binding protein [Staphylococcus aureus A9765] gi|284024905|ref|ZP_06379303.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus 132] gi|294850288|ref|ZP_06791023.1| extracellular glutamine-binding protein [Staphylococcus aureus A9754] gi|297207424|ref|ZP_06923861.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911508|ref|ZP_07128953.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH70] gi|304380538|ref|ZP_07363213.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|21204969|dbj|BAB95664.1| MW1799 [Staphylococcus aureus subsp. aureus MW2] gi|49245120|emb|CAG43586.1| putative extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57284834|gb|AAW36928.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus COL] gi|87127615|gb|ABD22129.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203240|gb|ABD31050.1| ABC transporter, permease protein, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374762|dbj|BAF68022.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus str. Newman] gi|160368885|gb|ABX29856.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253723797|gb|EES92526.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|257859626|gb|EEV82475.1| amino acid ABC transporter [Staphylococcus aureus A5948] gi|269941329|emb|CBI49726.1| putative extracellular glutamine-bindingprotein [Staphylococcus aureus subsp. aureus TW20] gi|282592986|gb|EFB97988.1| extracellular glutamine-binding protein [Staphylococcus aureus A9765] gi|294822904|gb|EFG39338.1| extracellular glutamine-binding protein [Staphylococcus aureus A9754] gi|296887887|gb|EFH26783.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887140|gb|EFK82340.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH70] gi|302751667|gb|ADL65844.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340867|gb|EFM06792.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315196792|gb|EFU27136.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus CGS01] gi|320141291|gb|EFW33136.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus MRSA131] gi|329314534|gb|AEB88947.1| Polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus T0131] gi|329729517|gb|EGG65919.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 21189] Length = 485 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 127/212 (59%), Gaps = 6/212 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I + I +T+ I+ I + I+G F+A++++ IIS I Y+ I RGTP Sbjct: 274 ISKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLS-KIKIISWIASIYIEILRGTP 332 Query: 70 LLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +LVQ+F++F+G+ +G+ + V I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++ Sbjct: 333 MLVQVFIVFFGITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSL 392 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ- 187 GL +QT++ +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ Sbjct: 393 GLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDP 452 Query: 188 --PLIIYCELAFVY-LILTSFCYIIQIKIESS 216 PLI+ L FV +LT +I+ ++ +S Sbjct: 453 FTPLIVAAALYFVLTFVLTRIMNMIEGRLNAS 484 >gi|331267034|ref|YP_004326664.1| ABC transporter-amino acid transport; amino acid-binding protein/permease protein [Streptococcus oralis Uo5] gi|326683706|emb|CBZ01324.1| ABC transporter-amino acid transport; amino acid-binding protein/permease protein [Streptococcus oralis Uo5] Length = 522 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 120/203 (59%), Gaps = 11/203 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISLIMHFY 61 +++ QLL A VTL I+ I ++ LIIG I V R I+ ++ I++ Y Sbjct: 288 ENWQQLLRGA-GVTLLISIIGTIVGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVY 346 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R I+++ KG Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILAVDKG 406 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 407 QFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNT 466 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + + TYQ + +A +Y +LT Sbjct: 467 VATQTYQYFQTFTIIAVIYFVLT 489 >gi|167033608|ref|YP_001668839.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166860096|gb|ABY98503.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 215 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/152 (40%), Positives = 101/152 (66%), Gaps = 1/152 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV +FRGTP LVQLF+I++G P IGI + F A +I L +N +AY+SE IR +I ++ G Sbjct: 56 YVSVFRGTPCLVQLFIIYFGGPQIGIELEPFSAAVIGLGMNIAAYMSESIRGAIDNVDPG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q + + +IG +R+QT+ II+PQ + PL I ++K +++ S I++ E+ TAQR Sbjct: 116 QEEGARSIGFSRRQTLLFIIIPQALKLMIRPLGVNAIGLIKGSALVSAISVVELTYTAQR 175 Query: 181 IVSTTYQPLIIYCELAFVYLILT-SFCYIIQI 211 +S+TY+P I+ A +Y+++ S Y++++ Sbjct: 176 FISSTYKPFEIFMVSALLYIVMVYSVKYLVEV 207 >gi|269103818|ref|ZP_06156515.1| putative amino acid ABC transporter permease protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268163716|gb|EEZ42212.1| putative amino acid ABC transporter permease protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 223 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 123/206 (59%), Gaps = 8/206 (3%) Query: 21 IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG 80 + TL +A + +L + IA+IRI + SL + Y+ FRGTPLLVQLF+ +YG Sbjct: 19 LTTTLSMALWGMIFALFLALVIALIRIKRIWGLNSLSL-LYISFFRGTPLLVQLFLFYYG 77 Query: 81 LPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 LP + F D + A +I L+L+F+AY++E IR +I+ I Q++AS AIG++ +Q +R Sbjct: 78 LPQVIPAFVGLDGYSAAVIGLSLHFAAYMAETIRGAILGIDNSQYEASLAIGMSEQQAMR 137 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 IILPQ + + L + FI ++KSTS+A + +PEI AQ S++++ + +A Sbjct: 138 RIILPQAMRIALPSLMNYFIDMIKSTSLAFALGVPEIMAKAQMEASSSFRFFEAFLAVAL 197 Query: 198 VY----LILTSFCYIIQIKIESSVTQ 219 +Y ++LT + + ++ + T+ Sbjct: 198 IYWLIVIVLTRLQTLAETRLNKAYTR 223 >gi|253735261|ref|ZP_04869426.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH130] gi|253726668|gb|EES95397.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH130] Length = 485 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 72/202 (35%), Positives = 125/202 (61%), Gaps = 6/202 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ I + I+G F+A++++ IIS I Y+ I RGTP+LVQ+F++F+ Sbjct: 284 GIKITILISLIGVALGSILGAFVALMKLS-KIKIISWIASIYIEILRGTPMLVQVFIVFF 342 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G+ +G+ + V I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL +QT++ Sbjct: 343 GITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKS 402 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCEL 195 +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ PLI+ L Sbjct: 403 VIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLIVAAAL 462 Query: 196 AFVY-LILTSFCYIIQIKIESS 216 FV +LT +I+ ++ +S Sbjct: 463 YFVLTFVLTRIMNMIEGRLNAS 484 >gi|190894720|ref|YP_001985013.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700381|gb|ACE94463.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 281 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 122/206 (59%), Gaps = 1/206 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I + P ++ +V T+ ++ +S VI+ I AV ++ ++ I FY FRG Sbjct: 68 IAEKLPFMITQGLVTTIYVSAVSIVIASAIAILGAVAKLS-TNGFAYAIASFYTSFFRGL 126 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+Q+++I+ GLP +G V D+ A I++L+L + AY++EI RS I SI +GQW+AS +I Sbjct: 127 PLLMQVYLIYLGLPQLGFVIDAVPAGILALSLCYGAYMTEIFRSGIQSIDRGQWEASRSI 186 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G T+R IILPQ + P ++FIS+LK +S+ S I + E+ A+ + T+Q Sbjct: 187 GFGFGITMRKIILPQALPVIIPPTGNQFISMLKDSSLVSVIGVWELMFLARTLGQKTFQH 246 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIE 214 + + A +Y I++ +IQ +IE Sbjct: 247 MEMLISAAMLYWIMSIGLELIQARIE 272 >gi|313890203|ref|ZP_07823838.1| ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] gi|313121564|gb|EFR44668.1| ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] Length = 220 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 129/213 (60%), Gaps = 11/213 (5%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLI 57 MK+ F L+ DS + + + T+ I+ +SF+ + +G +A++ R F I+ + Sbjct: 1 MKFIDFQLMKDSL-WFVLSGLPYTIGISALSFLTGISLGVLLAILGRSRHGFFRRIVKV- 58 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 YV I RG P++V LF++++G+P+ + + + I +L SAYISEI RSSI ++ Sbjct: 59 ---YVSIMRGVPMIVVLFMLYFGMPYFNLQLPALLCAYIGFSLVSSAYISEIFRSSINAV 115 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQW+A+ A+GL +K+ I+ +ILPQ I + PL + I ++KS+S+A+ IT+P+IFQ Sbjct: 116 ALGQWEAAKALGLPQKRVIKKVILPQAIRIAIPPLGNVVIDMIKSSSLAAMITVPDIFQN 175 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 A+ + + + +Y +AF+Y S CY+ + Sbjct: 176 AKIVGGREWDYMSMYILVAFIYW---SLCYLFE 205 >gi|262050150|ref|ZP_06023004.1| hypothetical protein SAD30_1114 [Staphylococcus aureus D30] gi|262052687|ref|ZP_06024879.1| hypothetical protein SA930_0823 [Staphylococcus aureus 930918-3] gi|259159436|gb|EEW44488.1| hypothetical protein SA930_0823 [Staphylococcus aureus 930918-3] gi|259161775|gb|EEW46363.1| hypothetical protein SAD30_1114 [Staphylococcus aureus D30] Length = 441 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 72/202 (35%), Positives = 125/202 (61%), Gaps = 6/202 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ I + I+G F+A++++ IIS I Y+ I RGTP+LVQ+F++F+ Sbjct: 240 GIKITILISLIGVALGSILGAFVALMKLS-KIKIISWIASIYIEILRGTPMLVQVFIVFF 298 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G+ +G+ + V I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL +QT++ Sbjct: 299 GITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKS 358 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCEL 195 +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ PLI+ L Sbjct: 359 VIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLIVAAAL 418 Query: 196 AFVY-LILTSFCYIIQIKIESS 216 FV +LT +I+ ++ +S Sbjct: 419 YFVLTFVLTRIMNMIEGRLNAS 440 >gi|209547509|ref|YP_002279427.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538753|gb|ACI58687.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 324 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 122/206 (59%), Gaps = 1/206 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I + P ++ +V T+ ++ +S VI+ I AV ++ ++ I FY FRG Sbjct: 111 IAEKLPFMITQGLVTTIYVSAVSIVIASAIAILGAVAKLS-TNGFAYAIASFYTSFFRGL 169 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+Q+++I+ GLP +G V D+ A I++L+L + AY++EI RS I SI +GQW+AS +I Sbjct: 170 PLLMQVYLIYLGLPQLGFVIDAVPAGILALSLCYGAYMTEIFRSGIQSIDRGQWEASRSI 229 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G T+R IILPQ + P ++FIS+LK +S+ S I + E+ A+ + T+Q Sbjct: 230 GFGFGITMRKIILPQALPVIIPPTGNQFISMLKDSSLVSVIGVWELMFLARTLGQKTFQH 289 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIE 214 + + A +Y I++ +IQ +IE Sbjct: 290 MEMLISAAMLYWIMSICLELIQARIE 315 >gi|153010173|ref|YP_001371387.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151562061|gb|ABS15558.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 219 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 70/197 (35%), Positives = 122/197 (61%), Gaps = 9/197 (4%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 V+T+ A +SFV+ I F + V+ ++ I++ + F++W+F GTPLL+QLF+I++GL Sbjct: 25 VLTVSSAFLSFVLG--IAFALVVL---YAPAILAYPVRFFMWLFMGTPLLLQLFLIYFGL 79 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IGI + A II L+L+F+ Y ++IIR+ I+++ GQ + + +IG + Q +R++++ Sbjct: 80 VQIGINIPALGAGIIGLSLHFAVYNADIIRAGIVAVDPGQMEGARSIGFSHGQALRYVVI 139 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY-- 199 PQ I + P+ + I +LK TS+ S I I E+ +AQ +S T+ P Y +A +Y Sbjct: 140 PQAIRNTIPPIGNNMIVLLKDTSLVSIIGIAELVHSAQLAISETFSPFEFYITVAAIYYV 199 Query: 200 --LILTSFCYIIQIKIE 214 L+L + I+ K+E Sbjct: 200 VNLVLEAGLRRIERKVE 216 >gi|239833358|ref|ZP_04681686.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239821421|gb|EEQ92990.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 224 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 70/197 (35%), Positives = 122/197 (61%), Gaps = 9/197 (4%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 V+T+ A +SFV+ I F + V+ ++ I++ + F++W+F GTPLL+QLF+I++GL Sbjct: 30 VLTVASAFLSFVLG--IAFALVVL---YAPAILAWPVRFFMWLFMGTPLLLQLFLIYFGL 84 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IGI + A II L+L+F+ Y ++IIR+ I+++ GQ + + +IG + Q +R++++ Sbjct: 85 VQIGIDIPALGAGIIGLSLHFAVYNADIIRAGIVAVDPGQMEGARSIGFSHGQALRYVVI 144 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY-- 199 PQ I + P+ + I +LK TS+ S I I E+ +AQ +S T+ P Y +A +Y Sbjct: 145 PQAIRNTIPPIGNNMIVLLKDTSLVSIIGIAELVHSAQLAISETFSPFEFYITVAAIYYV 204 Query: 200 --LILTSFCYIIQIKIE 214 L+L + I+ K+E Sbjct: 205 VNLVLEAGLRRIERKVE 221 >gi|322387247|ref|ZP_08060857.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus infantis ATCC 700779] gi|321141776|gb|EFX37271.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus infantis ATCC 700779] Length = 543 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 77/223 (34%), Positives = 127/223 (56%), Gaps = 11/223 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-------FFS--DTIISLIMHFY 61 +++ QLL A +TL I+ I ++ L+IG I V R FF I+ I++ Y Sbjct: 310 ENWQQLLRGA-GITLLISIIGTIVGLVIGLAIGVFRTAPQSENHFFYVIQNIVGWILNIY 368 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R I+++ KG Sbjct: 369 IEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILAVDKG 428 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 429 QFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNT 488 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + + TYQ + +A +Y +LT I IE + TY+ Sbjct: 489 VATQTYQYFQTFTIIAVIYFVLTFTVTRILRYIEKRMDMDTYT 531 >gi|255659183|ref|ZP_05404592.1| L-cystine ABC transporter, permease protein [Mitsuokella multacida DSM 20544] gi|260848634|gb|EEX68641.1| L-cystine ABC transporter, permease protein [Mitsuokella multacida DSM 20544] Length = 214 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 67/182 (36%), Positives = 111/182 (60%), Gaps = 7/182 (3%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I ++ VI+L +G A+ R+ +S M FY+W+ RGTPL++QL +++ LP Sbjct: 17 ITLEIFFVTLVIALPLGMMAALGRLS-KWRPLSAFMEFYIWLMRGTPLMLQLLFVYFALP 75 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 IGI A +++ TLN++AY +EI R+ I S+PKGQ++A+ +G+ QT+R IILP Sbjct: 76 MIGIRLPDIAAALLAFTLNYAAYFAEIFRAGIQSVPKGQYEAARTLGMNYTQTMRRIILP 135 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLII----YCELA 196 Q I P+S+E I+++K TS+ + + ++ + A+ IV + P +I Y + Sbjct: 136 QVIRIVLPPVSNETINLVKDTSLIYILAMNDLLRVARTIVQREFDMTPFLIAGVFYLAMT 195 Query: 197 FV 198 FV Sbjct: 196 FV 197 >gi|242240516|ref|YP_002988697.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242132573|gb|ACS86875.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 214 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 116/198 (58%), Gaps = 8/198 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMHFYVW 63 L+ DS P LL + +TL ++ + V S ++G AV+R + F + L Y Sbjct: 3 ELMFDSLPILL-RGLGITLLLSVAAMVGSTLLGLLAAVLRTSRLPFGRQLALL----YTE 57 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 +FRGTP+L+ L I++G+ + G + F A I+ L++ AYISE+ R+ I ++PKGQW+ Sbjct: 58 LFRGTPVLITLMFIYFGVAYFGYEINLFAAGILGLSIYQGAYISEVFRAGIDAVPKGQWE 117 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 S+ +GL++ QT H++LPQT PL +++S++K TS+ S I + E+ Q IV Sbjct: 118 VSWILGLSKWQTFMHVVLPQTRGIVLPPLVGQYLSLIKDTSIVSMIGMSELMHQGQAIVD 177 Query: 184 TTYQPLIIYCELAFVYLI 201 QP +IY ++ +Y + Sbjct: 178 RIGQPAVIYSLVSLLYFV 195 >gi|320143581|gb|EFW35361.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus MRSA177] Length = 467 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 72/202 (35%), Positives = 125/202 (61%), Gaps = 6/202 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ I + I+G F+A++++ IIS I Y+ I RGTP+LVQ+F++F+ Sbjct: 266 GIKITILISLIGVALGSILGAFVALMKLS-KIKIISWIASIYIEILRGTPMLVQVFIVFF 324 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G+ +G+ + V I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL +QT++ Sbjct: 325 GITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKS 384 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCEL 195 +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ PLI+ L Sbjct: 385 VIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLIVAAAL 444 Query: 196 AFVY-LILTSFCYIIQIKIESS 216 FV +LT +I+ ++ +S Sbjct: 445 YFVLTFVLTRIMNMIEGRLNAS 466 >gi|116628764|ref|YP_813936.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus gasseri ATCC 33323] gi|116094346|gb|ABJ59498.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus gasseri ATCC 33323] Length = 537 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 121/212 (57%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF---------FSDT 52 K WF I+ + ++ + +TL +A + ++ IG + ++R + Sbjct: 285 KENWFMSIMHRYGSMILGGVGMTLLLALVGTIVGFFIGLLVGIVRTIPTPKSTGKKWGLK 344 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 I+ I+ Y+ +FRGTP++VQ VI+YG+ + + + VA ++ +++N AY++E+IR Sbjct: 345 IVDWILAVYIEVFRGTPMMVQAAVIYYGIAQLWHLNSNRTVAALVIVSINTGAYLAEVIR 404 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I + PKGQ++A+ AIG+T Q + HIILPQ I +++EFI +K TSV S I++ Sbjct: 405 GGINATPKGQFEAASAIGMTHSQQMWHIILPQAIRNCLPSITNEFIVNIKDTSVLSIISV 464 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F + S T+Q Y ++ +YLILT Sbjct: 465 SELFFVGTTVASQTFQFFQTYFIISMIYLILT 496 >gi|169831297|ref|YP_001717279.1| polar amino acid ABC transporter, inner membrane subunit [Candidatus Desulforudis audaxviator MP104C] gi|169638141|gb|ACA59647.1| polar amino acid ABC transporter, inner membrane subunit [Candidatus Desulforudis audaxviator MP104C] Length = 235 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 75/217 (34%), Positives = 123/217 (56%), Gaps = 23/217 (10%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +I D+ P LL A +T I +S IIG F + R+ S ++ + YV FR Sbjct: 2 QVIFDALPLLLVGA-KLTFQITVLSVGFGCIIGLFAGLCRLSRS-RVLRYLATGYVDFFR 59 Query: 67 GTPLLVQLFVIFYGLPHI------------GI--------VFDSFVAIIISLTLNFSAYI 106 GTPLLVQ+F++++G+P + GI V ++A++ +LN AYI Sbjct: 60 GTPLLVQIFMLYFGMPQVVEMLQLYLLNEYGIPKMVDVSNVSRYWIAVL-GCSLNSGAYI 118 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EI R+ + SI +GQ +A+ ++G+T+ Q +R++ILPQ PL +EFI++LK TS+ Sbjct: 119 AEIFRAGVQSIERGQMEAARSLGMTQNQAMRYVILPQAFKRVIPPLGNEFIAMLKDTSLL 178 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 S I + E+ + Q I++ YQ I+ +A +YL++T Sbjct: 179 SVIGVEELTRKGQLIIAVNYQSAAIWFAVAMIYLLMT 215 >gi|312278333|gb|ADQ62990.1| L-cystine transport system permease protein TcyB [Streptococcus thermophilus ND03] Length = 190 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 66/189 (34%), Positives = 114/189 (60%), Gaps = 1/189 (0%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 +SF+I +AV+R+ + Y+ RG P+LV LF++++GLP++GI Sbjct: 1 MSFIIGNFFAILLAVMRMS-QKPWLKYPARIYISFMRGVPMLVVLFILYFGLPYVGIQIP 59 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 + + II + +AY++EI RSSI ++ KGQW A+ ++GL +K I HIILPQ + + Sbjct: 60 TLLCAIIGFSTVSAAYMAEIFRSSISAVDKGQWKAAQSLGLPQKPIIHHIILPQALRIAV 119 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYII 209 P + I ++KS+S+A+ IT+P+IFQ A+ I Y + +Y + F+Y +L+ ++ Sbjct: 120 APTCNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREYDYMSMYILITFIYWVLSFILELL 179 Query: 210 QIKIESSVT 218 Q ++E +T Sbjct: 180 QGQVEKRLT 188 >gi|326574956|gb|EGE24886.1| octopine transport system permease protein OccM [Moraxella catarrhalis 101P30B1] Length = 241 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 78/232 (33%), Positives = 134/232 (57%), Gaps = 15/232 (6%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMH 59 M + W II+ FP LL AA V T+ + +S + L+ G + + R+ S + + I Sbjct: 1 MNWNW-QAIINYFPDLL-AASVTTIELVVLSCALGLVFGVILGLWRL--SPVLWLRAIPA 56 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV----------AIIISLTLNFSAYISEI 109 Y++ FRGTPLLVQ+F+I+YGL + +SF+ II+ TLN SAYI EI Sbjct: 57 TYIFFFRGTPLLVQIFLIYYGLGQFTALKESFLWDPIFSQAYWCAIIAFTLNTSAYIGEI 116 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 +R +++++P G+ +A+ AIG++++Q + +ILP+ S+E I +LK +++A++I Sbjct: 117 VRGAVMAVPTGELEAADAIGMSKRQKLHRVILPRAFGIMLPAYSNEVIFMLKGSALAASI 176 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 T+ E+ A+ I+S TY L ++ +YL+++ I + E V +H Sbjct: 177 TVVELTHKARDIISITYLHLEMFFAAGMIYLVISWVFLFIFRQFEHRVNRHK 228 >gi|86138394|ref|ZP_01056968.1| amino acid ABC transporter [Roseobacter sp. MED193] gi|85824919|gb|EAQ45120.1| amino acid ABC transporter [Roseobacter sp. MED193] Length = 218 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 66/192 (34%), Positives = 120/192 (62%), Gaps = 8/192 (4%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I + ++S G F+AVI ++ + ++ + ++F GTPLL+QLF+I++GL Sbjct: 22 TIGITVGAALVSFFGGIFLAVIALY-APAVVRWPFRIFSFLFLGTPLLLQLFLIYFGLVQ 80 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 IGI +FVA +I L L+F+ Y SE+ ++SI+++ KGQ +A+ +GL+R Q +R +++PQ Sbjct: 81 IGIDVPAFVAGVIGLGLHFAVYNSELFQTSILAVDKGQIEAARTLGLSRMQALRKVVVPQ 140 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + P+ + I++LK +++ S I + E+ +AQR + +TY+P Y +A +Y Sbjct: 141 AVRDVIPPIGNNMIALLKDSALVSVIGVSELTLSAQRAIGSTYRPFEFYVLVAAIY---- 196 Query: 204 SFCYIIQIKIES 215 YII + +E+ Sbjct: 197 ---YIINLGMEA 205 >gi|187919126|ref|YP_001888157.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187717564|gb|ACD18787.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 222 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 78/198 (39%), Positives = 128/198 (64%), Gaps = 1/198 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ +I P +L+ A VVT+ + S +S ++G I + R+ I+ Y+ F Sbjct: 5 FSPVIAGLPDILHGA-VVTVEVTAASLALSCVLGLLIGIGRLTPKRRIVYGFCTAYLTFF 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF++F+GLP GI+ +FV ++ L L +AY+SEI+R +I S+ +GQ +A+ Sbjct: 64 RGTPLLVQLFLLFFGLPQFGILLPAFVCGMLGLGLYSAAYVSEIVRGAIQSVDRGQMEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IG++ Q +R IILPQ I PL +EFI+++K++++ S +TI ++ Q+I+S + Sbjct: 124 RSIGMSSGQAMRAIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIDDLMHEGQKIISVS 183 Query: 186 YQPLIIYCELAFVYLILT 203 Y+ L +Y +A VYL+LT Sbjct: 184 YRSLEVYLAIALVYLVLT 201 >gi|153010818|ref|YP_001372032.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151562706|gb|ABS16203.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 215 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 120/199 (60%), Gaps = 6/199 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVW 63 F+L+++ FP L AA+V T+ I+ ++ +I L +G ++ F+ + I YV Sbjct: 3 FSLMVEVFPYFLEAALV-TVEISALAILIGLSVGALATSAKLSRFWP---LRFIGTAYVS 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 +FRGTP L+QLFV+++G P IGI + F A I L LN AY +E +R +I+++ GQ + Sbjct: 59 VFRGTPCLLQLFVLYFGGPQIGINLEPFAAGAIGLGLNIGAYYAEAMRGAILTVDTGQNE 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG + Q++R ++LPQ L + ++K +++ S I++ E+ TAQR + Sbjct: 119 AARSIGFSNGQSMRFVVLPQAARLMIRSLGVNTVMLIKGSALVSAISVVELTYTAQRFIG 178 Query: 184 TTYQPLIIYCELAFVYLIL 202 +TY+P I+ A +Y++L Sbjct: 179 STYRPFEIFGIAAAIYMVL 197 >gi|22537609|ref|NP_688460.1| glutamine ABC transporter glutamine-binding protein/permease [Streptococcus agalactiae 2603V/R] gi|25011575|ref|NP_735970.1| glutamine ABC transporter permease and substrate binding protein [Streptococcus agalactiae NEM316] gi|76797646|ref|ZP_00779916.1| glutamine ABC transporter permease and substrate binding protein [Streptococcus agalactiae 18RS21] gi|77405223|ref|ZP_00782321.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus agalactiae H36B] gi|77414125|ref|ZP_00790292.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus agalactiae 515] gi|22534494|gb|AAN00333.1|AE014259_4 glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus agalactiae 2603V/R] gi|24413114|emb|CAD47192.1| glutamine ABC transporter permease and substrate binding protein [Streptococcus agalactiae NEM316] gi|76587007|gb|EAO63495.1| glutamine ABC transporter permease and substrate binding protein [Streptococcus agalactiae 18RS21] gi|77159836|gb|EAO70980.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus agalactiae 515] gi|77176225|gb|EAO78996.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus agalactiae H36B] Length = 727 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 72/214 (33%), Positives = 128/214 (59%), Gaps = 9/214 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 LI +++ QLL + I TL + ISF I+++IG ++ + S+T+ ++ M F V I RG Sbjct: 512 LISNNYKQLL-SGIGTTLSLTLISFAIAMVIGIIFGMMSVSPSNTLRTISMIF-VDIVRG 569 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ IF+G+P++ + FVA I+L+LN AYI+EI+R I ++P G Sbjct: 570 IPLMIVAAFIFWGIPNLIESITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPSG 629 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G++ +T++ +ILPQ + ++F+ LK T++ S I + E+FQT + Sbjct: 630 QMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKI 689 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I++ YQ +Y LA +YL++ + + ++E Sbjct: 690 IIARNYQSFRMYAILAIMYLVIITLLTRLAKRLE 723 >gi|312864788|ref|ZP_07725019.1| putative arginine ABC transporter, permease protein ArtQ [Streptococcus downei F0415] gi|311099915|gb|EFQ58128.1| putative arginine ABC transporter, permease protein ArtQ [Streptococcus downei F0415] Length = 230 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 126/213 (59%), Gaps = 12/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ---- 73 Y +V + C+ F + I+G +A+ + + +++ ++ FYVW+FRGTP++VQ Sbjct: 17 YGVLVTVMISVCVVF-LGTILGVLVALAK-RSNIKLLNYLVSFYVWVFRGTPMVVQIMIA 74 Query: 74 -LFVIFYGLPHIG-----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 L++ F P IG + F + II L+LN AYISEI+R+ I ++PKGQ +A+Y+ Sbjct: 75 FLWMNFKSAPTIGFGTVELDFSRLIPGIIILSLNSGAYISEIVRAGIEAVPKGQVEAAYS 134 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ + +R+++LPQ L +EFI+I+K +S+ TI I E++ AQ +++TTY Sbjct: 135 LGIKPAKAMRYVVLPQAFKNILPALGNEFITIIKDSSLLQTIGIMELWNGAQTVLATTYV 194 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 PL AF YL+LT+ Q +E+ + + Sbjct: 195 PLEPLLFAAFYYLMLTTVLTAGQKWLENRLGKG 227 >gi|222109051|ref|YP_002551317.1| ABC transporter membrane spanning protein (opine) [Agrobacterium radiobacter K84] gi|221727973|gb|ACM31023.1| ABC transporter membrane spanning protein (opine) [Agrobacterium radiobacter K84] Length = 241 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 79/207 (38%), Positives = 128/207 (61%), Gaps = 12/207 (5%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 LII+SFP+L+ AA+ TL +A IS +I ++ +A++R+ + I+S + + YV++ R Sbjct: 4 QLIIESFPKLI-AAVPTTLALAFISLLIGFVVSVPVALMRLS-KNRIVSSVAYGYVYLIR 61 Query: 67 GTPLLVQLFVIFYG-------LPHIGI---VFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 TPLLVQ+F+I+YG L IG+ + + I++L LN +AY SEIIR I + Sbjct: 62 STPLLVQMFLIYYGSAQFRGFLTEIGLWSSFREPWFCAILALALNTAAYTSEIIRGGIQA 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P GQ +A+ A+G++ R I+ P I + +E + I+KSTS+ASTITI E+ Sbjct: 122 VPLGQIEAARAVGMSTVLQFRRIVFPIAIRQALPAYGNEVMLIIKSTSLASTITIVEVTG 181 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A++I+S TY P+ ++ +YL +T Sbjct: 182 LAKQIISATYSPVEVFIVAGAIYLFIT 208 >gi|260460788|ref|ZP_05809038.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259033365|gb|EEW34626.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 219 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 122/204 (59%), Gaps = 12/204 (5%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 V+T+ +SFV ++ I + ++ I++ + +W+F GTPLL+QLF+I++GL Sbjct: 25 VLTISAGALSFVFGILF-----AITVLYAPAILAYPVRALMWLFMGTPLLLQLFLIYFGL 79 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 +GI + A I+ L L+F+ Y +++IR+ ++++ GQ + + +IG + QT+R++++ Sbjct: 80 VQVGIDIPALAAGIVGLGLHFAVYNADVIRAGVVAVDIGQTEGARSIGFGKWQTLRYVVI 139 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ I +A P+ S I++LK +SV S I I E+ +AQ +S T++P Y A +Y Sbjct: 140 PQAIRNTAPPIGSNLIALLKESSVVSVIGIAELVHSAQLAISETFRPFEFYITAAALY-- 197 Query: 202 LTSFCYIIQIKIESSVTQHTYSVD 225 YI+ + +E+++ + V+ Sbjct: 198 -----YILNLVLEAALHRFERHVE 216 >gi|158319239|ref|YP_001511746.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus oremlandii OhILAs] gi|158139438|gb|ABW17750.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus oremlandii OhILAs] Length = 226 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 113/190 (59%), Gaps = 11/190 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ +A + + +++G F+A++RI + I++ I YV I RGTPLLVQ+F+++YGLP Sbjct: 20 TVLLAFFTVALGVVLGIFLALMRIS-KNKILNFIGTAYVEIIRGTPLLVQIFIVYYGLPM 78 Query: 84 IGI----------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 +G + F+A II+L++N AY++EIIRS I S+ KGQ +A+ ++G+ Sbjct: 79 MGFKIPALSFLGSAGEEFIAGIIALSINSGAYVAEIIRSGIQSVDKGQMEAARSLGMPYP 138 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 ++HII+PQ L +EFI ++K +SV S I I E+ A + T+ PL Sbjct: 139 MAMKHIIIPQAFKNILPALGNEFIVVIKESSVMSVIGIHELMYNANTVRGNTFIPLEPLI 198 Query: 194 ELAFVYLILT 203 A +Y ILT Sbjct: 199 VAAGIYFILT 208 >gi|254519389|ref|ZP_05131445.1| amino acid ABC transporter [Clostridium sp. 7_2_43FAA] gi|226913138|gb|EEH98339.1| amino acid ABC transporter [Clostridium sp. 7_2_43FAA] Length = 482 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 122/205 (59%), Gaps = 8/205 (3%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + TL ++ IS +I+L+IG IA+IRI + I+ ++ Y+ RGTPLLVQLF+++ Sbjct: 279 SGLKTTLSLSIISMIIALVIGVIIALIRIN-NIKILKQLVEVYISFLRGTPLLVQLFLLY 337 Query: 79 YGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 +GLP I GI ++ A +I L LN SAYI+E +R + +I KGQ +A+ ++G+T+ Sbjct: 338 FGLPQIIPQLKGIT--AYTAAVIGLALNASAYIAESLRGAFDAIDKGQMEAALSVGMTKM 395 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q ++ I++PQ + L + F+ +K +S+A T+ + E AQ + +Y+ Y Sbjct: 396 QGMKRIVMPQMFRVAVPSLGNVFVDNIKGSSLAFTLGVTEALARAQMSAAASYRFFESYI 455 Query: 194 ELAFVYLILTSFCYIIQIKIESSVT 218 +A VY S +IQ IE+ ++ Sbjct: 456 AVAIVYWSTISVYNVIQKSIENKLS 480 >gi|312830230|emb|CBX35072.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Staphylococcus aureus subsp. aureus ECT-R 2] Length = 485 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 125/202 (61%), Gaps = 6/202 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ I + I+G F+A++++ IIS I Y+ I RGTP+LVQ+F++F+ Sbjct: 284 GIKITILISLIGVALGSILGVFVALMKLS-KIKIISWIASIYIEILRGTPMLVQVFIVFF 342 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G+ +G+ + V I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL +QT++ Sbjct: 343 GITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKS 402 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCEL 195 +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ PL++ L Sbjct: 403 VIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAAL 462 Query: 196 AFVY-LILTSFCYIIQIKIESS 216 FV +LT +I+ ++ +S Sbjct: 463 YFVLTFVLTRIMNMIEGRLNAS 484 >gi|14211227|gb|AAK57382.1|AF372619_1 GlnP [Streptococcus agalactiae COH1] Length = 727 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 72/214 (33%), Positives = 128/214 (59%), Gaps = 9/214 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 LI +++ QLL + I TL + ISF I+++IG ++ + S+T+ ++ M F V I RG Sbjct: 512 LISNNYKQLL-SGIGTTLSLTLISFAIAMVIGIIFGMMSVSPSNTLRTISMIF-VDIVRG 569 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ IF+G+P++ + FVA I+L+LN AYI+EI+R I ++P G Sbjct: 570 IPLMIVAAFIFWGIPNLIESITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPSG 629 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G++ +T++ +ILPQ + ++F+ LK T++ S I + E+FQT + Sbjct: 630 QMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKI 689 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I++ YQ +Y LA +YL++ + + ++E Sbjct: 690 IIARNYQSFRMYAILAIMYLVIITLLTRLAKRLE 723 >gi|257428635|ref|ZP_05605033.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus 65-1322] gi|257431272|ref|ZP_05607649.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus 68-397] gi|257433952|ref|ZP_05610310.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus E1410] gi|257436868|ref|ZP_05612912.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus M876] gi|282914654|ref|ZP_06322440.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus M899] gi|282924999|ref|ZP_06332665.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus C101] gi|293503725|ref|ZP_06667572.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus 58-424] gi|293510746|ref|ZP_06669451.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus M809] gi|293537288|ref|ZP_06671968.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus M1015] gi|257275476|gb|EEV06963.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus 65-1322] gi|257278220|gb|EEV08868.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus 68-397] gi|257282045|gb|EEV12182.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus E1410] gi|257284219|gb|EEV14342.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus M876] gi|282313365|gb|EFB43761.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus C101] gi|282321835|gb|EFB52160.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus M899] gi|290920133|gb|EFD97201.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus M1015] gi|291095391|gb|EFE25656.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus 58-424] gi|291466637|gb|EFF09158.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus M809] Length = 485 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 125/202 (61%), Gaps = 6/202 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ I + I+G F+A++++ IIS I Y+ I RGTP+LVQ+F++F+ Sbjct: 284 GIKITILISLIGVALGSILGAFVALMKLS-KIKIISWIASIYIEILRGTPMLVQVFIVFF 342 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G+ +G+ + V I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL +QT++ Sbjct: 343 GITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKS 402 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCEL 195 +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ PL++ L Sbjct: 403 VIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAAL 462 Query: 196 AFVY-LILTSFCYIIQIKIESS 216 FV +LT +I+ ++ +S Sbjct: 463 YFVLTFVLTRIMNMIEGRLNAS 484 >gi|297590597|ref|ZP_06949235.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus MN8] gi|297575483|gb|EFH94199.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus MN8] Length = 485 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 125/202 (61%), Gaps = 6/202 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ I + I+G F+A++++ IIS I Y+ I RGTP+LVQ+F++F+ Sbjct: 284 GIKITILISLIGVALGSILGAFVALMKLS-KIKIISWIASIYIEILRGTPMLVQVFIVFF 342 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G+ +G+ + V I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL +QT++ Sbjct: 343 GITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKS 402 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCEL 195 +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ PL++ L Sbjct: 403 VIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAAL 462 Query: 196 AFVY-LILTSFCYIIQIKIESS 216 FV +LT +I+ ++ +S Sbjct: 463 YFVLTFVLTRIMNMIEGRLNAS 484 >gi|104773375|ref|YP_618355.1| amino acid ABC transporter permease/substrate-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422456|emb|CAI97009.1| Amino acid ABC transporter, substrate binding / permease protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 527 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 74/214 (34%), Positives = 126/214 (58%), Gaps = 14/214 (6%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF------FSDTIIS 55 K W ++ ++ Q++ I +TL I+ +S + + IG ++++R F +++ Sbjct: 280 KENWLVSMLKNYGQMILEGIGMTLLISLVSTIAGIFIGLLVSIVRTIPEPKNKFKKGLLA 339 Query: 56 L---IMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEI 109 ++ YV IFRGTP++VQ VI+YG+ HI + + VA +I +++N AY++E+ Sbjct: 340 FCKWLLSVYVEIFRGTPMMVQAAVIYYGIAQFWHINL--NRTVAALIIVSINTGAYLAEV 397 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IR IIS PKGQ++A+ A+G+T Q + +IILPQ I +++EFI +K TSV S I Sbjct: 398 IRGGIISTPKGQFEAASALGMTHNQRMWNIILPQAIRNCLPSITNEFIVNIKDTSVLSII 457 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ E+F I S ++Q Y ++ +YL LT Sbjct: 458 SVSELFFVGSTIASQSFQFFQTYLVISVIYLFLT 491 >gi|298695127|gb|ADI98349.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus subsp. aureus ED133] Length = 485 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 125/202 (61%), Gaps = 6/202 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ I + I+G F+A++++ IIS I Y+ I RGTP+LVQ+F++F+ Sbjct: 284 GIKITILISLIGVALGSILGAFVALMKLS-KIKIISWIASIYIEILRGTPMLVQVFIVFF 342 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G+ +G+ + V I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL +QT++ Sbjct: 343 GITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKS 402 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCEL 195 +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ PL++ L Sbjct: 403 VIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAAL 462 Query: 196 AFVY-LILTSFCYIIQIKIESS 216 FV +LT +I+ ++ +S Sbjct: 463 YFVLTFVLTRIMNMIEGRLNAS 484 >gi|226355645|ref|YP_002785385.1| ABC transporter permease [Deinococcus deserti VCD115] gi|226317635|gb|ACO45631.1| putative ABC transporter, permease component [Deinococcus deserti VCD115] Length = 264 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 120/201 (59%), Gaps = 7/201 (3%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + +S VI L+IG IA I+ S+ ++ ++W+ RGTPLLVQ+ ++ LP Sbjct: 60 MTLQLTVVSGVIGLVIGM-IAGIQKTSSNWLVRAPASLFIWLIRGTPLLVQILFVYNALP 118 Query: 83 ------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 + + + F + +I+L LN AY +E+IR+ I++IP+GQ +A+ ++GL+ T+ Sbjct: 119 PLLAAIGLKVELNEFWSAVIALALNVGAYNAEVIRAGILAIPRGQTEAARSLGLSGGLTM 178 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 ++LPQ + PL + +++LK +S+ASTI + E+ R+ S ++QP+ + +A Sbjct: 179 STVVLPQALRIVVPPLVNNLVALLKDSSLASTIALLELSLAGSRVSSESFQPVPVLTTIA 238 Query: 197 FVYLILTSFCYIIQIKIESSV 217 VYL LT+ + ++E V Sbjct: 239 AVYLALTTVMTLFTDQLEKRV 259 >gi|118469246|ref|YP_885991.1| polar amino acid ABC transporter inner membrane protein [Mycobacterium smegmatis str. MC2 155] gi|118170533|gb|ABK71429.1| ABC polar amino acid transporter, inner membrane subunit [Mycobacterium smegmatis str. MC2 155] Length = 263 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 124/222 (55%), Gaps = 17/222 (7%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D+F Q +V+T+ I+ ++ V++ + G +A++R + + Y+W+ RGTPL Sbjct: 17 DAFLQ----GLVLTIVISVVAMVLATVAGLIVALMR-RSRLPAVRWVAGVYIWVIRGTPL 71 Query: 71 LVQLFVIFYGLPHIGI------------VFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 LVQL +I+ GL G+ V + A II L +N SAYI+EIIR+ + S+P Sbjct: 72 LVQLVLIYTGLAAAGLYQFHDVSLLGLSVKAALQAAIIGLMINESAYIAEIIRAGLDSVP 131 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ++A+ ++G+ + +R II+PQ + P+ + F ++K+TSV S I + E+F Sbjct: 132 KGQFEAAASLGMKPAKVMRWIIVPQALRVMVPPMGNSFNGLMKTTSVLSVIGVSEMFLVT 191 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Q I S T+ I+ A YL LT+ IQ IE+ + + Sbjct: 192 QSISSATFHTFEIFIVAAIYYLALTTIWTFIQAGIENRLARQ 233 >gi|282917128|ref|ZP_06324886.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus D139] gi|282319615|gb|EFB49967.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus D139] Length = 485 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 125/202 (61%), Gaps = 6/202 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ I + I+G F+A++++ IIS I Y+ I RGTP+LVQ+F++F+ Sbjct: 284 GIKITILISLIGVALGSILGAFVALMKLS-KIKIISWIASIYIEILRGTPMLVQVFIVFF 342 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G+ +G+ + V I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL +QT++ Sbjct: 343 GITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKS 402 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCEL 195 +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ PL++ L Sbjct: 403 VIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAAL 462 Query: 196 AFVY-LILTSFCYIIQIKIESS 216 FV +LT +I+ ++ +S Sbjct: 463 YFVLTFVLTRIMNMIEGRLNAS 484 >gi|82751513|ref|YP_417254.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus RF122] gi|82657044|emb|CAI81481.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus RF122] Length = 485 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 125/202 (61%), Gaps = 6/202 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ I + I+G F+A++++ IIS I Y+ I RGTP+LVQ+F++F+ Sbjct: 284 GIKITILISLIGVALGSILGAFVALMKLS-KIKIISWIASIYIEILRGTPMLVQVFIVFF 342 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G+ +G+ + V I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL +QT++ Sbjct: 343 GITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKS 402 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCEL 195 +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ PL++ L Sbjct: 403 VIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAAL 462 Query: 196 AFVY-LILTSFCYIIQIKIESS 216 FV +LT +I+ ++ +S Sbjct: 463 YFVLTFVLTRIMNMIEGRLNAS 484 >gi|329666485|gb|AEB92433.1| ABC transporter permease component [Lactobacillus johnsonii DPC 6026] Length = 537 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 122/212 (57%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF---------FSDT 52 K WF I+ + ++ + +TL +A + + IG + ++R + Sbjct: 285 KENWFMSIMRRYGSMILGGVGMTLLLALVGTIAGFFIGLLVGIVRTIPTPKSTGKRWGLK 344 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 I++ ++ Y+ +FRGTP++VQ VI+YG+ + + + VA ++ +++N AY++E+IR Sbjct: 345 IVNWLLAVYIEVFRGTPMMVQAAVIYYGIAQLWHLNLNRTVAALVIVSINTGAYLAEVIR 404 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I + PKGQ++A+ A+G+T Q + HIILPQ I S +++EFI +K TSV S I++ Sbjct: 405 GGINATPKGQFEAASALGMTHSQQMWHIILPQAIRNSLPSITNEFIVNIKDTSVLSIISV 464 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F + S T++ Y ++ +YLILT Sbjct: 465 SELFFVGTTVASQTFEFFQTYFIISMIYLILT 496 >gi|148268330|ref|YP_001247273.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus JH9] gi|150394392|ref|YP_001317067.1| polar amino acid ABC transporter inner membrane subunit [Staphylococcus aureus subsp. aureus JH1] gi|253315189|ref|ZP_04838402.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006646|ref|ZP_05145247.2| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793783|ref|ZP_05642762.1| polar amino acid ABC transporter [Staphylococcus aureus A9781] gi|258413720|ref|ZP_05681993.1| polar amino acid ABC transporter [Staphylococcus aureus A9763] gi|258420773|ref|ZP_05683712.1| polar amino acid ABC transporter [Staphylococcus aureus A9719] gi|258438434|ref|ZP_05689718.1| polar amino acid ABC transporter [Staphylococcus aureus A9299] gi|258443879|ref|ZP_05692218.1| polar amino acid ABC transporter [Staphylococcus aureus A8115] gi|258447334|ref|ZP_05695481.1| polar amino acid ABC transporter [Staphylococcus aureus A6300] gi|258448183|ref|ZP_05696310.1| polar amino acid ABC transporter [Staphylococcus aureus A6224] gi|258453384|ref|ZP_05701367.1| polar amino acid ABC transporter [Staphylococcus aureus A5937] gi|269203495|ref|YP_003282764.1| amino acid ABC transporter, permease [Staphylococcus aureus subsp. aureus ED98] gi|282895157|ref|ZP_06303376.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus A8117] gi|282928597|ref|ZP_06336196.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus A10102] gi|295406165|ref|ZP_06815973.1| polar amino acid ABC transporter [Staphylococcus aureus A8819] gi|297244912|ref|ZP_06928789.1| polar amino acid ABC transporter [Staphylococcus aureus A8796] gi|147741399|gb|ABQ49697.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus JH9] gi|149946844|gb|ABR52780.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus JH1] gi|257787755|gb|EEV26095.1| polar amino acid ABC transporter [Staphylococcus aureus A9781] gi|257839507|gb|EEV63978.1| polar amino acid ABC transporter [Staphylococcus aureus A9763] gi|257843377|gb|EEV67787.1| polar amino acid ABC transporter [Staphylococcus aureus A9719] gi|257848478|gb|EEV72469.1| polar amino acid ABC transporter [Staphylococcus aureus A9299] gi|257851285|gb|EEV75228.1| polar amino acid ABC transporter [Staphylococcus aureus A8115] gi|257853921|gb|EEV76877.1| polar amino acid ABC transporter [Staphylococcus aureus A6300] gi|257858422|gb|EEV81298.1| polar amino acid ABC transporter [Staphylococcus aureus A6224] gi|257864476|gb|EEV87221.1| polar amino acid ABC transporter [Staphylococcus aureus A5937] gi|262075785|gb|ACY11758.1| amino acid ABC transporter, permease [Staphylococcus aureus subsp. aureus ED98] gi|282589806|gb|EFB94891.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus A10102] gi|282762501|gb|EFC02642.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus A8117] gi|283471129|emb|CAQ50340.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus ST398] gi|294969162|gb|EFG45183.1| polar amino acid ABC transporter [Staphylococcus aureus A8819] gi|297177992|gb|EFH37240.1| polar amino acid ABC transporter [Staphylococcus aureus A8796] gi|315130497|gb|EFT86483.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus CGS03] gi|329732960|gb|EGG69304.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 21193] Length = 485 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 125/202 (61%), Gaps = 6/202 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ I + I+G F+A++++ IIS I Y+ I RGTP+LVQ+F++F+ Sbjct: 284 GIKITILISLIGVALGSILGAFVALMKLS-KIKIISWIASIYIEILRGTPMLVQVFIVFF 342 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G+ +G+ + V I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL +QT++ Sbjct: 343 GITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKS 402 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCEL 195 +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ PL++ L Sbjct: 403 VIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAAL 462 Query: 196 AFVY-LILTSFCYIIQIKIESS 216 FV +LT +I+ ++ +S Sbjct: 463 YFVLTFVLTRIMNMIEGRLNAS 484 >gi|329727185|gb|EGG63641.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 21172] Length = 485 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 125/202 (61%), Gaps = 6/202 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ I + I+G F+A++++ IIS I Y+ I RGTP+LVQ+F++F+ Sbjct: 284 GIKITILISLIGVALGSILGAFVALMKLS-KIKIISWIASIYIEILRGTPMLVQVFIVFF 342 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G+ +G+ + V I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL +QT++ Sbjct: 343 GITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKS 402 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCEL 195 +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ PL++ L Sbjct: 403 VIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAAL 462 Query: 196 AFVY-LILTSFCYIIQIKIESS 216 FV +LT +I+ ++ +S Sbjct: 463 YFVLTFVLTRIMNMIEGRLNAS 484 >gi|227889073|ref|ZP_04006878.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] gi|227850302|gb|EEJ60388.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] Length = 537 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 122/212 (57%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF---------FSDT 52 K WF I+ + ++ + +TL +A + + IG + ++R + Sbjct: 285 KENWFMSIMRRYGSMILGGVGMTLLLALVGTIAGFFIGLLVGIVRTIPTPKSTGKRWGLK 344 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 I++ ++ Y+ +FRGTP++VQ VI+YG+ + + + VA ++ +++N AY++E+IR Sbjct: 345 IVNWLLAVYIEVFRGTPMMVQAAVIYYGIAQLWHLNLNRTVAALVIVSINTGAYLAEVIR 404 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I + PKGQ++A+ A+G+T Q + HIILPQ I S +++EFI +K TSV S I++ Sbjct: 405 GGINATPKGQFEAASALGMTHSQQMWHIILPQAIRNSLPSITNEFIVNIKDTSVLSIISV 464 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F + S T++ Y ++ +YLILT Sbjct: 465 SELFFVGTTVASQTFEFFQTYFIISMIYLILT 496 >gi|302333524|gb|ADL23717.1| amino acid ABC transporter protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 485 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 127/212 (59%), Gaps = 6/212 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I + I +T+ I+ I + I+G F+A++++ IIS I Y+ I RGTP Sbjct: 274 ISKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLS-KIKIISWIASIYIEILRGTP 332 Query: 70 LLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +LVQ+F++F+G+ +G+ + V I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++ Sbjct: 333 MLVQVFIVFFGITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSL 392 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ- 187 GL +QT++ +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ Sbjct: 393 GLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDP 452 Query: 188 --PLIIYCELAFVY-LILTSFCYIIQIKIESS 216 PL++ L FV +LT +I+ ++ +S Sbjct: 453 FTPLLVAAALYFVLTFVLTRIMNMIEGRMNAS 484 >gi|15924848|ref|NP_372382.1| glutamine-binding periplasmic protein [Staphylococcus aureus subsp. aureus Mu50] gi|15927432|ref|NP_374965.1| hypothetical protein SA1675 [Staphylococcus aureus subsp. aureus N315] gi|156980174|ref|YP_001442433.1| hypothetical protein SAHV_1843 [Staphylococcus aureus subsp. aureus Mu3] gi|13701651|dbj|BAB42944.1| SA1675 [Staphylococcus aureus subsp. aureus N315] gi|14247630|dbj|BAB58020.1| similar to glutamine-binding periplasmic protein [Staphylococcus aureus subsp. aureus Mu50] gi|156722309|dbj|BAF78726.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|285817538|gb|ADC38025.1| Glutamate ABC transporter, periplasmic glutamine-binding protein [Staphylococcus aureus 04-02981] Length = 441 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 125/202 (61%), Gaps = 6/202 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ I + I+G F+A++++ IIS I Y+ I RGTP+LVQ+F++F+ Sbjct: 240 GIKITILISLIGVALGSILGAFVALMKLS-KIKIISWIASIYIEILRGTPMLVQVFIVFF 298 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G+ +G+ + V I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL +QT++ Sbjct: 299 GITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKS 358 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCEL 195 +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ PL++ L Sbjct: 359 VIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAAL 418 Query: 196 AFVY-LILTSFCYIIQIKIESS 216 FV +LT +I+ ++ +S Sbjct: 419 YFVLTFVLTRIMNMIEGRLNAS 440 >gi|126466428|ref|YP_001041537.1| polar amino acid ABC transporter, inner membrane subunit [Staphylothermus marinus F1] gi|126015251|gb|ABN70629.1| polar amino acid ABC transporter, inner membrane subunit [Staphylothermus marinus F1] Length = 229 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 120/200 (60%), Gaps = 2/200 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E N+I +P L + TL + S+ + I+GF IA+ R++ + ++ YV Sbjct: 6 EVVNIIYVYYPMFL-EGLKNTLILTFTSYTMGFILGFLIAIGRVYGPRPLRYTLLS-YVE 63 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTP+L+QLF+++Y LP IG+ D A + + LN +AY SE +RSSI ++P+GQW+ Sbjct: 64 LIRGTPMLLQLFMVYYALPEIGVKLDPLTAAFLGMGLNSAAYQSEYLRSSIKAVPRGQWE 123 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+TR Q + II P + +S L++E + +LK +S+A +T+ E+ + I + Sbjct: 124 AALSIGMTRWQAMTSIIAPIALRSSIPALTNELVYLLKYSSLAYFLTVIELVYAGKIIGA 183 Query: 184 TTYQPLIIYCELAFVYLILT 203 T+ L IY +A +Y L+ Sbjct: 184 ATFAYLQIYTIIAIIYFALS 203 >gi|49484100|ref|YP_041324.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257425970|ref|ZP_05602394.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus 55/2053] gi|282904433|ref|ZP_06312321.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus C160] gi|282906256|ref|ZP_06314111.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus Btn1260] gi|282909175|ref|ZP_06316993.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911481|ref|ZP_06319283.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus WBG10049] gi|282919619|ref|ZP_06327354.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus C427] gi|283958611|ref|ZP_06376062.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus A017934/97] gi|295428436|ref|ZP_06821065.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|49242229|emb|CAG40936.1| putative extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257271664|gb|EEV03810.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus 55/2053] gi|282317429|gb|EFB47803.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus C427] gi|282325176|gb|EFB55486.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus WBG10049] gi|282327439|gb|EFB57734.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331548|gb|EFB61062.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus Btn1260] gi|282596051|gb|EFC01015.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus C160] gi|283790760|gb|EFC29577.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus A017934/97] gi|295127836|gb|EFG57473.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|312437677|gb|ADQ76748.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH60] gi|315195770|gb|EFU26157.1| putative extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus CGS00] Length = 485 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 125/202 (61%), Gaps = 6/202 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ I + I+G F+A++++ IIS I Y+ I RGTP+LVQ+F++F+ Sbjct: 284 GIKITILISLIGVALGSILGAFVALMKLS-KIKIISWIASIYIEILRGTPMLVQVFIVFF 342 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G+ +G+ + V I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL +QT++ Sbjct: 343 GITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKS 402 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCEL 195 +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ PL++ L Sbjct: 403 VIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAAL 462 Query: 196 AFVY-LILTSFCYIIQIKIESS 216 FV +LT +I+ ++ +S Sbjct: 463 YFVLTFVLTRIMNMIEGRLNAS 484 >gi|42518173|ref|NP_964103.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] gi|41582457|gb|AAS08069.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] Length = 537 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 122/212 (57%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF---------FSDT 52 K WF I+ + ++ + +TL +A + + IG + ++R + Sbjct: 285 KENWFMSIMRRYGSMILGGVGMTLLLALVGTIAGFFIGLLVGIVRTIPTPKSTGKRWGLK 344 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 I++ ++ Y+ +FRGTP++VQ VI+YG+ + + + VA ++ +++N AY++E+IR Sbjct: 345 IVNWLLAVYIEVFRGTPMMVQAAVIYYGIAQLWHLNLNRTVAALVIVSINTGAYLAEVIR 404 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I + PKGQ++A+ A+G+T Q + HIILPQ I S +++EFI +K TSV S I++ Sbjct: 405 GGINATPKGQFEAASALGMTHSQQMWHIILPQAIRNSLPSITNEFIVNIKDTSVLSIISV 464 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F + S T++ Y ++ +YLILT Sbjct: 465 SELFFVGTTVASQTFEFFQTYFIISMIYLILT 496 >gi|326692574|ref|ZP_08229579.1| amino acid ABC transporter [Leuconostoc argentinum KCTC 3773] Length = 491 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 65/193 (33%), Positives = 120/193 (62%), Gaps = 3/193 (1%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + L ++TL +A ++ +I +++G +A+ ++ + I+ +I + YV RGTPLL Sbjct: 282 KYGNLFVKGTLITLALAAVAVIIGVVLGTILALFKLS-PNFILRVIGNVYVEYVRGTPLL 340 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 VQ F++F+G IG+ +F A +++ LN +AY++EIIRS I S+ GQ +A+ ++GL+ Sbjct: 341 VQAFMVFFGTQVIGLNLSAFAAGSLAMGLNSAAYVAEIIRSGINSVDGGQTEAARSLGLS 400 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVSTTYQPLI 190 +++T+R I+LPQ + L +EF++++K SV S I + E+ FQT + +++P Sbjct: 401 KRKTMRFIVLPQAVKNILPALGNEFVTVIKEGSVVSVIGVGELMFQTG-VVQGASFKPFF 459 Query: 191 IYCELAFVYLILT 203 +F+Y +LT Sbjct: 460 PLLIASFIYFVLT 472 >gi|77411077|ref|ZP_00787431.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus agalactiae CJB111] gi|77162900|gb|EAO73857.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus agalactiae CJB111] Length = 727 Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 128/214 (59%), Gaps = 9/214 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 LI +++ QLL + I TL + ISF I+++IG ++ + S+T+ ++ M F V + RG Sbjct: 512 LISNNYKQLL-SGIGTTLSLTLISFAIAMVIGIIFGMMSVSPSNTLRTISMIF-VDVVRG 569 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ IF+G+P++ + FVA I+L+LN AYI+EI+R I ++P G Sbjct: 570 IPLMIVAAFIFWGIPNLIESITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPSG 629 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G++ +T++ +ILPQ + ++F+ LK T++ S I + E+FQT + Sbjct: 630 QMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKI 689 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I++ YQ +Y LA +YL++ + + ++E Sbjct: 690 IIARNYQSFRMYAILAIMYLVIITLLTRLAKRLE 723 >gi|255994765|ref|ZP_05427900.1| amino acid ABC transporter, permease protein [Eubacterium saphenum ATCC 49989] gi|255993478|gb|EEU03567.1| amino acid ABC transporter, permease protein [Eubacterium saphenum ATCC 49989] Length = 220 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 127/220 (57%), Gaps = 11/220 (5%) Query: 4 EWFNLIIDSFPQLLYAA-IVVTLPIACISFVISLIIGFFIAVI-RIFFSDTIISLIMHFY 61 E FN + P LL A I V L + + F + L I F + V RI I + Y Sbjct: 3 ENFN---EYMPLLLEGAKITVLLCVITLVFALPLGIPFALGVRSRI----KPIKYLCECY 55 Query: 62 VWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V IFRGTPLL+QL+ +Y P ++GI D F + LN++AY +EI R I SI KG Sbjct: 56 VLIFRGTPLLLQLWFFYYLFPMYLGIQVDEFETAAFAFVLNYAAYFAEIYRGGINSIDKG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A++A+G+ R +T++ IILPQ + P+++E I ++K T++AS IT+ +I + +Q Sbjct: 116 QYEAAFALGVPRWRTMKDIILPQAMKAMLPPIANEAIVLIKDTALASAITLMDIMKVSQA 175 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +VS + I+ A +YLILT II +IE ++H Sbjct: 176 VVSRN-SDIKIFLYAAVIYLILTGITTIIAKRIEKRFSRH 214 >gi|319745422|gb|EFV97729.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus agalactiae ATCC 13813] Length = 727 Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 128/214 (59%), Gaps = 9/214 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 LI +++ QLL + I TL + ISF I+++IG ++ + S+T+ ++ M F V + RG Sbjct: 512 LISNNYKQLL-SGIGTTLSLTLISFAIAMVIGIIFGMMSVSPSNTLRTISMIF-VDVVRG 569 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ IF+G+P++ + FVA I+L+LN AYI+EI+R I ++P G Sbjct: 570 IPLMIVAAFIFWGIPNLIESITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPSG 629 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G++ +T++ +ILPQ + ++F+ LK T++ S I + E+FQT + Sbjct: 630 QMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKI 689 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I++ YQ +Y LA +YL++ + + ++E Sbjct: 690 IIARNYQSFRMYAILAIMYLVIITLLTRLAKRLE 723 >gi|76788581|ref|YP_330104.1| polar amino acid ABC transporter permease/substrate-binding protein [Streptococcus agalactiae A909] gi|76563638|gb|ABA46222.1| polar amino acid uptake (PAAT) family ABC transporter, substrate-binding/permease protein [Streptococcus agalactiae A909] Length = 727 Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 128/214 (59%), Gaps = 9/214 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 LI +++ QLL + I TL + ISF I+++IG ++ + S+T+ ++ M F V + RG Sbjct: 512 LISNNYKQLL-SGIGTTLSLTLISFAIAMVIGIIFGMMSVSPSNTLRTISMIF-VDVVRG 569 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ IF+G+P++ + FVA I+L+LN AYI+EI+R I ++P G Sbjct: 570 IPLMIVAAFIFWGIPNLIESITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPSG 629 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G++ +T++ +ILPQ + ++F+ LK T++ S I + E+FQT + Sbjct: 630 QMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKI 689 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I++ YQ +Y LA +YL++ + + ++E Sbjct: 690 IIARNYQSFRMYAILAIMYLVIITLLTRLAKRLE 723 >gi|239833797|ref|ZP_04682125.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239821860|gb|EEQ93429.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 241 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 119/199 (59%), Gaps = 6/199 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVW 63 F+L+ + FP L AA+V T+ I+ ++ +I L +G ++ F+ + I YV Sbjct: 29 FSLMAEVFPYFLEAALV-TVEISALAILIGLSVGALATAAKLSRFWP---LRFIGAAYVS 84 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 +FRGTP L+QLFV+++G P IGI + F A I L LN AY +E +R +I+++ GQ + Sbjct: 85 VFRGTPCLLQLFVLYFGGPQIGINLEPFAAGAIGLGLNIGAYYAEAMRGAILTVDAGQNE 144 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG + Q++R ++LPQ L + ++K +++ S I++ E+ TAQR + Sbjct: 145 AARSIGFSSGQSMRFVVLPQAARLMIRSLGVNTVMLIKGSALVSAISVVELTYTAQRFIG 204 Query: 184 TTYQPLIIYCELAFVYLIL 202 +TY+P I+ A +Y++L Sbjct: 205 STYRPFEIFGIAAAIYMVL 223 >gi|296276990|ref|ZP_06859497.1| amino acid ABC transporter, permease [Staphylococcus aureus subsp. aureus MR1] Length = 485 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 125/202 (61%), Gaps = 6/202 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ I + I+G F+A++++ IIS I Y+ I RGTP+LVQ+F++F+ Sbjct: 284 GIKITILISLIGVALGSILGAFVALMKLS-KIKIISWIASIYIEILRGTPMLVQVFIVFF 342 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G+ +G+ + V I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL +QT++ Sbjct: 343 GITAALGLDISTLVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKS 402 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCEL 195 +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ PL++ L Sbjct: 403 VIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAAL 462 Query: 196 AFVY-LILTSFCYIIQIKIESS 216 FV +LT +I+ ++ +S Sbjct: 463 YFVLTFVLTRIMNMIEGRLNAS 484 >gi|258423136|ref|ZP_05686030.1| polar amino acid ABC transporter [Staphylococcus aureus A9635] gi|257846700|gb|EEV70720.1| polar amino acid ABC transporter [Staphylococcus aureus A9635] Length = 485 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 125/202 (61%), Gaps = 6/202 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ I + I+G F+A++++ IIS I Y+ I RGTP+LVQ+F++F+ Sbjct: 284 GIKITILISLIGVALGSILGAFVALMKLS-KIKIISWIASIYIEILRGTPMLVQVFIVFF 342 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G+ +G+ + V I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL +QT++ Sbjct: 343 GITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKS 402 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCEL 195 +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ PL++ L Sbjct: 403 VIMPQAIKNILPSLGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAAL 462 Query: 196 AFVY-LILTSFCYIIQIKIESS 216 FV +LT +I+ ++ +S Sbjct: 463 YFVLTFVLTRIMNMIEGRLNAS 484 >gi|320546339|ref|ZP_08040656.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus equinus ATCC 9812] gi|320448993|gb|EFW89719.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus equinus ATCC 9812] Length = 228 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 123/213 (57%), Gaps = 12/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 Y +V + AC+ F IIG +A+++ + I++ I FYVW+FRGTP++VQ+ + Sbjct: 15 YGVLVTIMISACVVF-FGTIIGILVALVK-RTNIKILNWITSFYVWVFRGTPMVVQIMIA 72 Query: 78 FY----------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 F G + + F + II ++LN AYISEI+R+ I ++PKGQ +A+Y+ Sbjct: 73 FAWMHFSNAPIVGFGVLDLDFSRLLPGIIIISLNSGAYISEIVRAGIEAVPKGQLEAAYS 132 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ +R++ILPQ + L +EFI+I+K +S+ TI + E++ AQ +V+ TY Sbjct: 133 LGIRPVNAMRYVILPQALKNILPALGNEFITIIKDSSLLQTIGVMELWNGAQSVVTATYL 192 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P+ AF YL++T+ + K+E+ + Sbjct: 193 PITPLLFAAFYYLMVTTVLSFLLKKLETRMGNG 225 >gi|306828881|ref|ZP_07462073.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] gi|304429059|gb|EFM32147.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] Length = 520 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 73/213 (34%), Positives = 124/213 (58%), Gaps = 15/213 (7%) Query: 5 WFNLII----DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSD 51 +FN ++ +++ QLL A +TL I+ I V LIIG I V R I+ Sbjct: 277 FFNQVVKILSENWQQLLRGA-GITLLISIIGTVTGLIIGLAIGVFRTAPLSENKAIYGLQ 335 Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEII 110 ++ I++ Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+ Sbjct: 336 KLLGWILNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIV 395 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R I+++ KGQ++A+ A+G+T QT+R ++LPQ + +EF+ +K TSV + I+ Sbjct: 396 RGGILAVDKGQFEAATALGMTHNQTMRKVVLPQVVRNILPATGNEFVINIKDTSVLNVIS 455 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + E++ + + + TYQ + +A +Y +LT Sbjct: 456 VVELYFSGNTVATQTYQYFQTFTIIAVIYFVLT 488 >gi|332522492|ref|ZP_08398744.1| lysine-arginine-ornithine-binding periplasmic protein [Streptococcus porcinus str. Jelinkova 176] gi|332313756|gb|EGJ26741.1| lysine-arginine-ornithine-binding periplasmic protein [Streptococcus porcinus str. Jelinkova 176] Length = 724 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 126/216 (58%), Gaps = 9/216 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F L+ +++ QLL A + TL + ISF I+++IG ++ + S I +I +V + Sbjct: 507 FGLLSNNYKQLL-AGLGTTLSLTLISFAIAMVIGIIFGMMAVAPSKKI-RVISSVFVDVV 564 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RG PL++ IF+G+P++ + F+A I+L+LN AYI+EI+R I +IP Sbjct: 565 RGIPLMIVAAFIFWGIPNLIESMTGHQSPINDFLAATIALSLNGGAYIAEIVRGGIEAIP 624 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS ++G+ K T+R +ILPQ++ ++F+ LK T++ S I + E+FQT Sbjct: 625 AGQMEASRSLGIPYKITMRKVILPQSVKVMLPNFINQFVISLKDTTIVSAIGLVELFQTG 684 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + I++ YQ +Y LA +YLI+ + + ++E Sbjct: 685 KIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLE 720 >gi|313632859|gb|EFR99809.1| amino acid ABC transporter, permease protein [Listeria seeligeri FSL N1-067] Length = 213 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 126/212 (59%), Gaps = 7/212 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + I++ P LL A TL + ++ V S+ +G +A+ + T + I++ Y+WI R Sbjct: 2 DYIMEILPALLDGA-KTTLLVFAVTLVCSIPLGALVAIGNVS-KITPLKFILNIYIWILR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL I+YGLP IGIVFD A+ I+ LN++AY +EI R +SI GQ++++ Sbjct: 60 GTPLLLQLIFIYYGLPIIGIVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENGQYESAK 119 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--T 184 +GLT QT+R I+LPQ + + +E I+++K +S+ + I ++ + + +S Sbjct: 120 VLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDV 179 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 T PL++ +A +YL LT+ ++ ++E Sbjct: 180 TLIPLVL---VAAIYLALTAXXXVLFKQLEKR 208 >gi|260888233|ref|ZP_05899496.1| glutamine ABC transporter, permease protein [Selenomonas sputigena ATCC 35185] gi|330838428|ref|YP_004413008.1| polar amino acid ABC transporter, inner membrane subunit [Selenomonas sputigena ATCC 35185] gi|260862067|gb|EEX76567.1| glutamine ABC transporter, permease protein [Selenomonas sputigena ATCC 35185] gi|329746192|gb|AEB99548.1| polar amino acid ABC transporter, inner membrane subunit [Selenomonas sputigena ATCC 35185] Length = 221 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 127/204 (62%), Gaps = 4/204 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++ F+L ++SFP LL A+V T+ I IS + ++IG + V RI + L M Sbjct: 1 MNFD-FDLAVNSFPVLLVGALV-TIKITAISVALGVVIGLVVGVARISQVKPLRLLAMA- 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ RGTPLLVQ+F+I++ LP I G D F A I + ++N AY++EI RS I SI K Sbjct: 58 YIDFLRGTPLLVQIFLIYFALPVISGQRVDPFFAAITACSINSGAYVAEIFRSGIQSIDK 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A ++G+T QT+ HIILPQ + + +EFI++LK +S+ S I E+ ++ Q Sbjct: 118 GQMEAGRSLGMTWLQTMWHIILPQAVKRVIPQIGNEFIALLKDSSLVSVIGFEELTRSGQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I++ TY L I+ +A +YL++T Sbjct: 178 LIIARTYGSLEIWPCVAIIYLVMT 201 >gi|222081156|ref|YP_002540519.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725835|gb|ACM28924.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 219 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 119/203 (58%), Gaps = 2/203 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y+W + + +L++ + T I+ V L +G IA+ R+ + I+S+++ Sbjct: 1 MGYQWDFGFLLQYSKLIWIGALYTCGFTIITVVSGLTVGGVIALARLS-NFKIVSVLLTG 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 ++ IFR TP+LVQL +Y LP + GI VA I+LTL +++ SEIIR I+S+ Sbjct: 60 FIEIFRCTPVLVQLVWCYYALPILSGIELTPAVAAFITLTLYGASFYSEIIRGGIVSVDA 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQWDA AIG+ R Q +R +I+PQ + PL ++ + LK+TS+ S + +P++ Q Sbjct: 120 GQWDAGRAIGMRRHQLMRRVIMPQALRRMLPPLVNQSVLQLKNTSLLSVLAVPDLLYQGQ 179 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 I S +Y+PL Y +A +Y I+ Sbjct: 180 LITSASYRPLETYTMIAVIYFII 202 >gi|332523543|ref|ZP_08399795.1| ABC transporter, permease protein [Streptococcus porcinus str. Jelinkova 176] gi|332314807|gb|EGJ27792.1| ABC transporter, permease protein [Streptococcus porcinus str. Jelinkova 176] Length = 220 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 128/213 (60%), Gaps = 11/213 (5%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLI 57 MK+ F L+ DS + + + T+ I+ +SF+ + +G +A++ R F I+ + Sbjct: 1 MKFINFQLMKDSL-WFVLSGLPYTIGISALSFLTGISLGILLAILGRSRHGFFRRIVKV- 58 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 YV I RG P++V LF++++G+P+ + + + I +L SAYISEI RSSI ++ Sbjct: 59 ---YVSIMRGVPMIVVLFMLYFGMPYFNLQLPALLCAYIGFSLVSSAYISEIFRSSINAV 115 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQW+A+ A+GL +K I+ +ILPQ I + PL + I ++KS+S+A+ IT+P+IFQ Sbjct: 116 ALGQWEAAKALGLPQKTVIKKVILPQAIRIAIPPLGNIVIDMIKSSSLAAMITVPDIFQN 175 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 A+ + + + +Y +AF+Y S CY+ + Sbjct: 176 AKIVGGREWDYMSMYILVAFIYW---SLCYLFE 205 >gi|315640022|ref|ZP_07895148.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] gi|315484231|gb|EFU74701.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] Length = 213 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 124/212 (58%), Gaps = 11/212 (5%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPL 70 FPQL+ + I VTL + ++ + S+ +G A F S L +M Y+W+ RGTPL Sbjct: 8 FPQLM-SGIGVTLKLFLLTIIGSVPLGIIFA---FFLSSKFAPLRWVMQVYIWLMRGTPL 63 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L+QL +FYGLP I IVF+ F A + + LN++AY +EI R I SIP+GQ++A+ + L Sbjct: 64 LLQLIFVFYGLPLINIVFERFDAALFAFVLNYAAYFAEIFRGGIQSIPQGQYEAAQVLRL 123 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV--STTYQP 188 QTIR II+PQ + + +E I+++K TS+ + + ++ + + + TT P Sbjct: 124 NPIQTIRKIIIPQVTKITLPSVGNEVINLVKDTSLIYILGLSDVMRLGKIAMERDTTLVP 183 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 L+ +A VYL +T C ++ ++E+ + + Sbjct: 184 LL---GVAIVYLAMTGICTVVLRQLENRLDYY 212 >gi|110802404|ref|YP_697895.1| amino acid ABC transporter permease [Clostridium perfringens SM101] gi|110682905|gb|ABG86275.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens SM101] Length = 223 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 127/205 (61%), Gaps = 11/205 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF----FSDTIISLIMHFY 61 F+ + + FP L A TL I+ I+ ++ ++G + ++ F F I+ +I Y Sbjct: 6 FSFLKEYFPVFLEGA-KWTLIISAITVILGALLGTILCFMKRFKFSIFKVKILRVISTAY 64 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V + RGTPLL+Q++++++GLP GI + + II+++LN +AY+SEIIR+ I ++ KGQ Sbjct: 65 VEVIRGTPLLLQIYIVYFGLPSFGIQLEVLPSCIIAISLNSAAYVSEIIRAGIDAVDKGQ 124 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++G+T +R IILPQ I + +EF++I+K +S+ASTI + E+ +++ + Sbjct: 125 LEAARSLGMTEGMAMRLIILPQAIKNILPAIGNEFVAIIKESSMASTIGVAELMYSSKIV 184 Query: 182 VSTTY---QPLIIYCELAFVYLILT 203 TY +PLI+ +A Y ++T Sbjct: 185 TGATYKGFEPLIV---IAMFYFVMT 206 >gi|150398177|ref|YP_001328644.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150029692|gb|ABR61809.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 223 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 70/186 (37%), Positives = 115/186 (61%), Gaps = 4/186 (2%) Query: 5 WFNL--IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 +FN+ ++DS PQLL+ + VTL I S + L G F+AV R++ S ++ YV Sbjct: 7 FFNVKVLLDSLPQLLWG-LAVTLQIGITSILCGLAGGLFLAVARLY-SPPFCQFLIRTYV 64 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +FR PLLV L V++Y LP +GI F++ + SL+L +AY +EI R+ I +IP GQ+ Sbjct: 65 DVFRSIPLLVLLIVVYYALPFVGIRLSPFLSAVTSLSLVSAAYTAEIFRAGIEAIPHGQF 124 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS A+GL+ + T+ +ILPQ + PL++ I++LK T++AS + +P++ + A + Sbjct: 125 EASAALGLSNRHTMVDVILPQAVRIVIPPLTNNCINVLKDTALASVVAMPDLLKQATQAQ 184 Query: 183 STTYQP 188 + P Sbjct: 185 ALAANP 190 >gi|327441628|dbj|BAK17993.1| ABC-type amino acid transport system, permease component [Solibacillus silvestris StLB046] Length = 221 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 123/199 (61%), Gaps = 2/199 (1%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+++TL + +S +I ++IG F A+++I ++ LI YV++ RGTPL+VQ+F++++ Sbjct: 21 AMLLTLELTVVSILIGIVIGLFFALMKIS-KIKVLELISDIYVFLVRGTPLIVQIFILYF 79 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GL + ++ D F A ++L L+ AYISEI+R +I + KGQ +A ++G+T+ T+R I Sbjct: 80 GLSGLFLLPD-FWAASLALALHNGAYISEILRGTIQGVDKGQMEAGRSLGMTKVLTLRRI 138 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + PL ++FI LK +S+A+ I++ E+F A + S + + +A Y Sbjct: 139 ILPQAFRRALPPLGNQFIIGLKDSSLAAFISMNELFNVATTLGSNNFDEMTYLLIVAIYY 198 Query: 200 LILTSFCYIIQIKIESSVT 218 L+L + +I + E + Sbjct: 199 LVLVALLTLIVNRFEKRLA 217 >gi|238855887|ref|ZP_04646176.1| amino acid ABC transporter permease protein [Lactobacillus jensenii 269-3] gi|282931561|ref|ZP_06337058.1| amino acid ABC transporter, permease protein [Lactobacillus jensenii 208-1] gi|238831550|gb|EEQ23898.1| amino acid ABC transporter permease protein [Lactobacillus jensenii 269-3] gi|281304317|gb|EFA96422.1| amino acid ABC transporter, permease protein [Lactobacillus jensenii 208-1] Length = 534 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 125/214 (58%), Gaps = 14/214 (6%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT--------- 52 K WF +++ ++ A + +TL +A + + IG + VIR + T Sbjct: 284 KTNWFVSTWNTYGSMILAGVGMTLLLALVGTIAGFFIGLVVGVIRTIPTPTSLLNRWLLK 343 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEI 109 +++ ++ YV +FRGTP++VQ VI+YG+ H+ + + VA ++ +++N AY++E+ Sbjct: 344 VVNFLLSVYVEVFRGTPMMVQAAVIYYGIAQFWHLNL--NRTVAALVIVSINTGAYLAEV 401 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IR I++ PKGQ++A+ A+G+T Q + +IILPQ I +++EFI +K TSV S I Sbjct: 402 IRGGIMATPKGQFEAASALGMTHNQRMWNIILPQAIKNCLPSITNEFIVNIKDTSVLSII 461 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ E+F I S ++Q Y ++ +YL+LT Sbjct: 462 SVSELFFVGSTIASQSFQFFQTYLMISAIYLVLT 495 >gi|116513356|ref|YP_812262.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092671|gb|ABJ57824.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 527 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 74/214 (34%), Positives = 125/214 (58%), Gaps = 14/214 (6%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF------FSDTIIS 55 K W ++ ++ Q++ I +TL I+ +S + IG ++++R F +++ Sbjct: 280 KENWLVSMLKNYGQMILEGIGMTLLISLVSTIAGFFIGLLVSIVRTIPEPKNKFKKGLLA 339 Query: 56 L---IMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEI 109 ++ YV IFRGTP++VQ VI+YG+ HI + + VA +I +++N AY++E+ Sbjct: 340 FCKWLLSVYVEIFRGTPMMVQAAVIYYGIAQFWHINL--NRTVAALIIVSINTGAYLAEV 397 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IR IIS PKGQ++A+ A+G+T Q + +IILPQ I +++EFI +K TSV S I Sbjct: 398 IRGGIISTPKGQFEAASALGMTHNQRMWNIILPQAIRNCLPSITNEFIVNIKDTSVLSII 457 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ E+F I S ++Q Y ++ +YL LT Sbjct: 458 SVSELFFVGSTIASQSFQFFQTYLVISVIYLFLT 491 >gi|325124980|gb|ADY84310.1| Putative glutamine ABC transporter [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 527 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 74/214 (34%), Positives = 125/214 (58%), Gaps = 14/214 (6%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF------FSDTIIS 55 K W ++ ++ Q++ I +TL I+ +S + IG ++++R F +++ Sbjct: 280 KENWLVSMLKNYGQMILEGIGMTLLISLVSTIAGFFIGLLVSIVRTIPEPKNKFKKGLLA 339 Query: 56 L---IMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEI 109 ++ YV IFRGTP++VQ VI+YG+ HI + + VA +I +++N AY++E+ Sbjct: 340 FCKWLLSVYVEIFRGTPMMVQAAVIYYGIAQFWHINL--NRTVAALIIVSINTGAYLAEV 397 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IR IIS PKGQ++A+ A+G+T Q + +IILPQ I +++EFI +K TSV S I Sbjct: 398 IRGGIISTPKGQFEAASALGMTHNQRMWNIILPQAIRNCLPSITNEFIVNIKDTSVLSII 457 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ E+F I S ++Q Y ++ +YL LT Sbjct: 458 SVSELFFVGSTIASQSFQFFQTYLVISVIYLFLT 491 >gi|315641120|ref|ZP_07896199.1| glutamine ABC superfamily ATP binding cassette transporter, binding/permease protein [Enterococcus italicus DSM 15952] gi|315483128|gb|EFU73645.1| glutamine ABC superfamily ATP binding cassette transporter, binding/permease protein [Enterococcus italicus DSM 15952] Length = 722 Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats. Identities = 74/204 (36%), Positives = 119/204 (58%), Gaps = 2/204 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L A + T+ +A +SF ++L++G ++ + + ++ YV I RG P++V Sbjct: 519 QQLLAGLGKTMVLALVSFALALVVGVIFGLMSVA-PIKAVRIVASIYVDIIRGIPMMVLA 577 Query: 75 FVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 F IF+GL GI F A II+LTLN SAYI+EI+R I ++P GQ +AS ++GL+ Sbjct: 578 FFIFFGLSGATGITIPDFAAGIITLTLNASAYIAEIVRGGINAVPVGQMEASRSLGLSYG 637 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 +T++ IILPQ I ++F+ LK T++ S I + E+ QT + IV++T Q +Y Sbjct: 638 RTMQKIILPQAIKIMIPSFVNQFVISLKDTTIISVIGVVELLQTGKIIVASTLQSTYVYF 697 Query: 194 ELAFVYLILTSFCYIIQIKIESSV 217 +A +YLI+ + I +E V Sbjct: 698 IIAVMYLIIITVLTRIAKVLEKKV 721 >gi|27468910|ref|NP_765547.1| ABC transporter (permease protein) [Staphylococcus epidermidis ATCC 12228] gi|27316458|gb|AAO05633.1|AE016750_238 ABC transporter (permease protein) [Staphylococcus epidermidis ATCC 12228] Length = 164 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 68/164 (41%), Positives = 102/164 (62%), Gaps = 10/164 (6%) Query: 70 LLVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIPK 119 ++VQLF+IFYG+P +G + + +A +I L+LN AY SEIIR I+SIPK Sbjct: 1 MIVQLFIIFYGIPELGRLVTNNADNQWTLAPVIAAVIGLSLNVGAYASEIIRGGILSIPK 60 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+Y+IG+ +QT++ IILPQ I S L + F+S++K TS+ I + E+F+ AQ Sbjct: 61 GQTEAAYSIGMNYRQTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQ 120 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + STTY+ L IY +A +Y ++ IIQ ES + + S Sbjct: 121 EVASTTYEYLTIYLLVALMYWVVCFVISIIQGWYESRIERGYRS 164 >gi|296113907|ref|YP_003627845.1| octopine transport system permease protein OccM [Moraxella catarrhalis RH4] gi|295921601|gb|ADG61952.1| octopine transport system permease protein OccM [Moraxella catarrhalis RH4] gi|326561457|gb|EGE11807.1| octopine transport system permease protein OccM [Moraxella catarrhalis 46P47B1] gi|326562228|gb|EGE12556.1| octopine transport system permease protein OccM [Moraxella catarrhalis 7169] gi|326567182|gb|EGE17304.1| octopine transport system permease protein OccM [Moraxella catarrhalis BC1] gi|326572018|gb|EGE22020.1| octopine transport system permease protein OccM [Moraxella catarrhalis BC8] gi|326576286|gb|EGE26201.1| octopine transport system permease protein OccM [Moraxella catarrhalis CO72] Length = 241 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 78/232 (33%), Positives = 134/232 (57%), Gaps = 15/232 (6%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMH 59 M + W II+ FP LL AA V T+ + +S + L+ G + + R+ S + + I Sbjct: 1 MNWNW-QAIINYFPDLL-AASVTTIELVVLSCALGLVFGVILGLWRL--SPVLWLRAIPA 56 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV----------AIIISLTLNFSAYISEI 109 Y++ FRGTPLLVQ+F+I+YGL + +SF+ II+ TLN SAYI EI Sbjct: 57 TYIFFFRGTPLLVQIFLIYYGLGQFTALKESFLWDPIFSQAYWCAIIAFTLNTSAYIGEI 116 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 +R +++++P G+ +A+ AIG++++Q + +ILP+ S+E I +LK +++A++I Sbjct: 117 VRGAVMAVPTGELEAADAIGMSKQQKLHRVILPRAFGIMIPAYSNEVIFMLKGSALAASI 176 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 T+ E+ A+ I+S TY L ++ +YL+++ I + E V +H Sbjct: 177 TVVELTHKARDIISITYLHLEMFFAAGMIYLVISWVFLFIFRQFEHRVNRHK 228 >gi|329116273|ref|ZP_08244990.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] gi|326906678|gb|EGE53592.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] Length = 724 Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats. Identities = 72/214 (33%), Positives = 125/214 (58%), Gaps = 9/214 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ +++ QLL + + TL + ISF I++IIG ++ + S + +I +V + RG Sbjct: 509 LVSNNYNQLL-SGLWTTLSLTLISFAIAMIIGLIFGMMAVAPSKAL-RIISSIFVDVVRG 566 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ IF+G+P++ + F+A I+L+LN AYI+EI+R I ++P G Sbjct: 567 VPLMIVAAFIFWGIPNLIESMTGHQSPINDFLAATIALSLNGGAYIAEIVRGGIEAVPLG 626 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G+ K T+R +ILPQ I ++F+ LK T++ S I + E+FQT + Sbjct: 627 QMEASRSLGIPYKITMRKVILPQAIKVMLPNFINQFVISLKDTTIVSAIGLVELFQTGKI 686 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I++ YQ +Y LA +YLI+ +F + ++E Sbjct: 687 IIARNYQSFRMYAILAIIYLIMITFLTRLAKRLE 720 >gi|260665023|ref|ZP_05865873.1| ABC transporter permease component [Lactobacillus jensenii SJ-7A-US] gi|260561077|gb|EEX27051.1| ABC transporter permease component [Lactobacillus jensenii SJ-7A-US] Length = 534 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 125/214 (58%), Gaps = 14/214 (6%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT--------- 52 K WF +++ ++ A + +TL +A + + IG + VIR + T Sbjct: 284 KTNWFVSTWNTYGSMILAGVGMTLLLALVGTIAGFFIGLVVGVIRTIPTPTSLLNRWLLK 343 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEI 109 +++ ++ YV +FRGTP++VQ VI+YG+ H+ + + VA ++ +++N AY++E+ Sbjct: 344 VVNFLLSVYVEVFRGTPMMVQAAVIYYGIAQFWHLNL--NRTVAALVIVSINTGAYLAEV 401 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IR I++ PKGQ++A+ A+G+T Q + +IILPQ I +++EFI +K TSV S I Sbjct: 402 IRGGIMATPKGQFEAASALGMTHNQRMWNIILPQAIKNCLPSITNEFIVNIKDTSVLSII 461 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ E+F I S ++Q Y ++ +YL+LT Sbjct: 462 SVSELFFVGSTIASQSFQFFQTYLMISAIYLVLT 495 >gi|116254531|ref|YP_770367.1| putative ABC transporter permease component [Rhizobium leguminosarum bv. viciae 3841] gi|115259179|emb|CAK10297.1| putative ABC transporter permease component [Rhizobium leguminosarum bv. viciae 3841] Length = 216 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 73/210 (34%), Positives = 129/210 (61%), Gaps = 2/210 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N++ S P LL A VVT+ IA ++ + ++ G + ++ + S +I + YV + Sbjct: 4 WNIVWLSVP-LLAKASVVTIQIAVLAGIAEIVFGIALGLVSLAQSR-LIRTPVAIYVDVI 61 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLL+Q+F +++ LP GI F+ F A + +L LN +A+I+E +R ++ SI KGQ +A+ Sbjct: 62 RGTPLLIQIFFVYFVLPGFGIGFNEFWAGVTALGLNGAAFIAETVRGAVGSIEKGQSEAA 121 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IG+ QT+ I+LPQ + P ++E I++ K+TS+ S I++ E+ ++ Q IVS Sbjct: 122 RSIGMREHQTLIWILLPQALRQIVPPTTNEVINLTKNTSLLSAISVFELTRSGQSIVSMY 181 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + PL +Y LA Y ++ ++ K+E+ Sbjct: 182 FAPLEVYGLLAIYYYVIVKALTVLSRKLEN 211 >gi|289435076|ref|YP_003464948.1| amino acid ABC transporter, permease protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171320|emb|CBH27862.1| amino acid ABC transporter, permease protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 213 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 73/210 (34%), Positives = 125/210 (59%), Gaps = 7/210 (3%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ P LL A TL + ++ V S+ +G +A+ + T + I++ Y+WI RGT Sbjct: 4 IMEILPALLDGA-KTTLLVFAVTLVCSIPLGALVAIGNVS-KITPLKFILNIYIWIMRGT 61 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QL I+YGLP IGIVFD A+ I+ LN++AY +EI R +SI GQ++++ + Sbjct: 62 PLLLQLIFIYYGLPIIGIVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVL 121 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTY 186 GLT QT+R I+LPQ + + +E I+++K +S+ + I ++ + + +S T Sbjct: 122 GLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTL 181 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESS 216 PL++ +A +YL LT+ ++ ++E Sbjct: 182 IPLVL---VAAIYLALTAILTVLFKQLEKR 208 >gi|315222036|ref|ZP_07863947.1| ABC transporter, permease protein [Streptococcus anginosus F0211] gi|315189002|gb|EFU22706.1| ABC transporter, permease protein [Streptococcus anginosus F0211] Length = 521 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 118/206 (57%), Gaps = 11/206 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISLIM 58 ++ D++PQ L A +TL I+ + LIIG I V R + T+ S + Sbjct: 284 ILKDNWPQFLRGA-GLTLLISITGTIAGLIIGLLIGVYRTAPTAKNKVLAMLQTLFSWFL 342 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + Y+ IFRGTP++VQ VI+YG G+ D +A I +++N AY+SEI+R I ++ Sbjct: 343 NIYIEIFRGTPMIVQSMVIYYGTAQAFGVSIDRTIAAIFIVSINTGAYMSEIVRGGIFAV 402 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G+T QT+R ++LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 403 DKGQFEAATALGMTHNQTMRKVVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFS 462 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 I + TYQ + +A +Y +LT Sbjct: 463 GNTIATQTYQYFQTFTIIAVIYFVLT 488 >gi|295426255|ref|ZP_06818916.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter [Lactobacillus amylolyticus DSM 11664] gi|295064100|gb|EFG55047.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter [Lactobacillus amylolyticus DSM 11664] Length = 536 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 119/212 (56%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT--------- 52 K W + ++ + + +TL +A + V+ IG + ++R + T Sbjct: 286 KENWLISTWKQYGNMILSGVGMTLLLALVGTVVGFFIGLLVGIVRTIPTPTTRGKRWGLN 345 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 I ++ YV +FRGTP++VQ VI+YG+ + + VA +I +++N AY++E+IR Sbjct: 346 IAKWLLSVYVEVFRGTPMMVQAAVIYYGIAQFWHLNLNRTVAALIIVSINTGAYLAEVIR 405 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 IIS P+GQ++A+ A+G+T Q + HIILPQ I +++EFI +K TSV S I++ Sbjct: 406 GGIISTPEGQFEAASALGMTHNQRMWHIILPQAIKNCLPSITNEFIVNIKDTSVLSIISV 465 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F I S T+Q Y ++ +YL+LT Sbjct: 466 SELFFVGTTIASQTFQFFPTYLTISAIYLVLT 497 >gi|295397425|ref|ZP_06807512.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] gi|294974326|gb|EFG50066.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] Length = 727 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 119/192 (61%), Gaps = 3/192 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + ++FP LL + + T+ +A +S VI+ I+G F+ ++R + ++S I Y+ I RG Sbjct: 513 LANNFPALL-SGLGTTVYLAIVSLVIATILGIFLGLMRTS-GNVVLSGIATVYIDIMRGL 570 Query: 69 PLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PL+V F I++G+P + I S +A I++L+LN +AY+ EI+R I +I GQ +A+ + Sbjct: 571 PLIVMSFFIYFGIPQMFNITISSNLAGILTLSLNAAAYMGEIVRGGIQAIDTGQTEAARS 630 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GLT QT+RHIILPQ + ++F+ LK TS+ S I I E+ QT + I++ TYQ Sbjct: 631 LGLTNGQTMRHIILPQAVKVMVPSFINQFVITLKDTSILSVIGIVELTQTGRIIIARTYQ 690 Query: 188 PLIIYCELAFVY 199 ++ + +Y Sbjct: 691 SGSMWLIVGLMY 702 >gi|329770549|ref|ZP_08261927.1| hypothetical protein HMPREF0433_01691 [Gemella sanguinis M325] gi|328836298|gb|EGF85967.1| hypothetical protein HMPREF0433_01691 [Gemella sanguinis M325] Length = 214 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 77/218 (35%), Positives = 125/218 (57%), Gaps = 8/218 (3%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I+ P LL ++ TL + + ++S+ +G IA I + F+ TI++ ++ Y+WI RGT Sbjct: 4 LIEILPSLLNGTLI-TLEVFFLVLILSIPLGIIIAFI-MRFNITILNYFINIYIWIMRGT 61 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QL I+Y LP +G+ FD A II+ TLN++AY +EI R I SIPKGQ++A+ + Sbjct: 62 PLLLQLIFIYYVLPTVGVRFDRLPAAIIAFTLNYAAYFAEIFRGGINSIPKGQYEAAKVL 121 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 + QTIR IILPQ I + +E +S++K TS+ + I ++ A R + Sbjct: 122 KFNQFQTIRFIILPQVIKIVLPSVFNEIMSLVKDTSLVYALGISDLI-LASRTAANRDAS 180 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 L+ +YLIL ++ ++E Y+ D+ Sbjct: 181 LLPMFVAGMIYLILIGIVTVVSKRVEKR-----YNYDR 213 >gi|325568891|ref|ZP_08145184.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] gi|325157929|gb|EGC70085.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] Length = 226 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/213 (36%), Positives = 125/213 (58%), Gaps = 9/213 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ DS P LL + + T+ IA +SF+ ++G + + + + II + Y+ RG Sbjct: 10 LMWDSLPYLL-SGLSYTVGIAVVSFLGGNLLGIMLTFLGML-ENPIIRGFVRGYLSFLRG 67 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 P LV LF++++GLP+ + A II TL SA+I EI R SI + +GQ+DA+YA Sbjct: 68 VPALVLLFLLYFGLPY---QLSALSAAIICFTLTSSAFIGEIYRGSIAGVDRGQFDAAYA 124 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL+ +T+R IILPQ S LS+ + +LK TS+A+ ITIP+IFQ A+ + T+ Sbjct: 125 LGLSFTKTMRLIILPQAFRISVPALSNVAMDLLKGTSLAAMITIPDIFQKAKIVGGRTFD 184 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + +Y +A +Y +L C +I+ + + QH Sbjct: 185 YMSMYVLVAIIYWLL---CILIEAG-QKRLEQH 213 >gi|323441690|gb|EGA99335.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus O46] Length = 467 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 125/202 (61%), Gaps = 6/202 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ I + I+G F+A++++ +IS I Y+ I RGTP+LVQ+F++F+ Sbjct: 266 GIKITILISLIGVALGSILGAFVALMKLS-KIKVISWIASIYIEILRGTPMLVQVFIVFF 324 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G+ +G+ + V I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL +QT++ Sbjct: 325 GITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKS 384 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCEL 195 +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ PL++ L Sbjct: 385 VIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAAL 444 Query: 196 AFVY-LILTSFCYIIQIKIESS 216 FV +LT +I+ ++ +S Sbjct: 445 YFVLTFVLTRIMNMIEGRLNAS 466 >gi|118470385|ref|YP_887852.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD [Mycobacterium smegmatis str. MC2 155] gi|118171672|gb|ABK72568.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Mycobacterium smegmatis str. MC2 155] Length = 226 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 119/200 (59%), Gaps = 3/200 (1%) Query: 5 WFN-LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W N ++ FP+LL A +T+ + + I+L++G F+AVIR + ++S + FYV Sbjct: 11 WDNQFALEIFPKLL-DAFWLTIRLTIVGMAIALVLGLFVAVIR-YPRIPVVSQLFDFYVL 68 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RGTPLLVQ+F +++ LP GI +F A ++ L +N+SAY +E+ R+ I ++PKGQW+ Sbjct: 69 FVRGTPLLVQIFAVYFILPEYGITLSNFTAGVLVLGINYSAYTAEVYRAGIEALPKGQWE 128 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+ L+R +T I+LPQ+I L + I + K T++ I E+ TA+ I Sbjct: 129 AATALNLSRARTWSRIVLPQSIAMIIPVLGNYLIQMFKDTALLYAIGTLEVLTTARSIGQ 188 Query: 184 TTYQPLIIYCELAFVYLILT 203 +T Q L +YLI++ Sbjct: 189 STGQFLEPLTIAGLMYLIIS 208 >gi|313673773|ref|YP_004051884.1| amino acid abc transporter membrane protein, paat family [Calditerrivibrio nitroreducens DSM 19672] gi|312940529|gb|ADR19721.1| amino acid ABC transporter membrane protein, PAAT family [Calditerrivibrio nitroreducens DSM 19672] Length = 315 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 73/191 (38%), Positives = 124/191 (64%), Gaps = 7/191 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ +S +I+++IG + RI S+ + + YV + RGTPLLVQ+F+ ++ Sbjct: 120 TLYISFVSILIAIVIGIVTGLCRIS-SNVALKKLAVTYVELIRGTPLLVQIFIFYF---F 175 Query: 84 IGIVF--DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IG VF D + I +L + AYI+EI+R+ I SIPKGQ +AS ++G+ Q +R++IL Sbjct: 176 IGTVFKLDRITSGIAALAIFAGAYIAEIVRAGIQSIPKGQMEASRSLGMNYFQAMRYVIL 235 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ I + P++ +FIS++K +S+ S I+I ++ + + IVS+T+ P ++ +A +YL+ Sbjct: 236 PQAIKRTLPPMAGQFISLIKDSSLVSVISITDLTKAGREIVSSTFSPFEVWFVVAVMYLV 295 Query: 202 LTS-FCYIIQI 211 LTS +++QI Sbjct: 296 LTSGLSFLVQI 306 >gi|283770942|ref|ZP_06343834.1| polar amino acid ABC transporter inner membrane subunit [Staphylococcus aureus subsp. aureus H19] gi|283461089|gb|EFC08179.1| polar amino acid ABC transporter inner membrane subunit [Staphylococcus aureus subsp. aureus H19] Length = 485 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 125/202 (61%), Gaps = 6/202 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ I + I+G F+A++++ IIS I Y+ I RGTP+LVQ+F++F+ Sbjct: 284 GIKITILISLIGVALGSILGAFVALMKLS-KIKIISWIPSIYIEILRGTPMLVQVFIVFF 342 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G+ +G+ + V I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL +QT++ Sbjct: 343 GITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKS 402 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCEL 195 +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ PL++ L Sbjct: 403 VIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAAL 462 Query: 196 AFVY-LILTSFCYIIQIKIESS 216 FV +LT +I+ ++ +S Sbjct: 463 YFVLTFVLTRIMNMIEGRLNAS 484 >gi|289167714|ref|YP_003445983.1| amino acid ABC transporter, permease protein [Streptococcus mitis B6] gi|288907281|emb|CBJ22116.1| amino acid ABC transporter, permease protein [Streptococcus mitis B6] Length = 227 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 77/228 (33%), Positives = 127/228 (55%), Gaps = 19/228 (8%) Query: 6 FNLIIDSFPQLLYAAIV---VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 F+ + FP Y AIV +++ + C+ ++ +++ F V R F I + + YV Sbjct: 3 FSFLPKYFPYFNYGAIVTILISICVVCLGTILGVVLAF---VQRSRFKPLI--WLANLYV 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 WIFRGTP++VQ+ + F L HI G+ + I+ +++N AYISE +R+ Sbjct: 58 WIFRGTPMMVQIMIAF-ALMHINAPTIQVGILGVDLSRLIPGILIISMNSGAYISETVRA 116 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++PKGQ +A+Y++G+ K +R++ILPQ I L +EFI+I+K +S+ S I + Sbjct: 117 GINAVPKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVM 176 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E++ A + +TTY PL AF YLI+TS + E+ + Q Sbjct: 177 ELWNGAITVSATTYLPLTPLLFAAFYYLIMTSILTVTLKSFENYMGQG 224 >gi|268318646|ref|YP_003292302.1| ABC transporter permease component [Lactobacillus johnsonii FI9785] gi|262397021|emb|CAX66035.1| ABC transporter permease component [Lactobacillus johnsonii FI9785] Length = 537 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 122/212 (57%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF---------FSDT 52 K WF I+ + ++ + +TL +A + + IG + ++R + Sbjct: 285 KENWFMSIMRRYGSMILGGVGMTLLLALVGTIAGFFIGLLVGIVRTIPTPKSTGKRWGLK 344 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 I++ ++ Y+ +FRGTP++VQ VI+YG+ + + + +A ++ +++N AY++E+IR Sbjct: 345 IVNWLLAVYIEVFRGTPMMVQAAVIYYGIAQLWHLNLNRTLAALVIVSINTGAYLAEVIR 404 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I + PKGQ++A+ A+G+T Q + HIILPQ I S +++EFI +K TSV S I++ Sbjct: 405 GGINATPKGQFEAASALGMTHSQQMWHIILPQAIRNSLPSITNEFIVNIKDTSVLSIISV 464 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F + S T++ Y ++ +YLILT Sbjct: 465 SELFFVGTTVASQTFEFFQTYFIISMIYLILT 496 >gi|295691960|ref|YP_003600570.1| amino acid ABC transporter, permease component [Lactobacillus crispatus ST1] gi|295030066|emb|CBL49545.1| Amino acid ABC transporter, permease component [Lactobacillus crispatus ST1] Length = 537 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 121/212 (57%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT--------- 52 K W + ++ + I +TL +A +S ++ IG + +IR + T Sbjct: 287 KENWLVTTWKQYGGMIMSGIGMTLLLALVSTIVGFFIGLLVGIIRTIPTPTTRGKRWTLN 346 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ ++ YV IFRGTP++VQ VI+YG+ + + VA +I +++N AY++E+IR Sbjct: 347 VVKWLLSVYVEIFRGTPMMVQAAVIYYGIAQFWHLNLNRTVAALIIVSINTGAYLAEVIR 406 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 IIS P+GQ++A+ A+G+T Q + HIILPQ I +++EFI +K TSV S I++ Sbjct: 407 GGIISTPEGQFEAASALGMTHNQRMWHIILPQAIKNCLPSITNEFIVNIKDTSVLSIISV 466 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F I S +++ Y ++ +YLILT Sbjct: 467 SELFFVGTTIASQSFKFFPTYLMISAIYLILT 498 >gi|239928984|ref|ZP_04685937.1| permease [Streptomyces ghanaensis ATCC 14672] gi|291437323|ref|ZP_06576713.1| arginine/ornithine transport permease [Streptomyces ghanaensis ATCC 14672] gi|291340218|gb|EFE67174.1| arginine/ornithine transport permease [Streptomyces ghanaensis ATCC 14672] Length = 312 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 124/219 (56%), Gaps = 22/219 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + + TL + ++ I ++ G +AV+R+ + + S I FY+W FRGTP+LV Sbjct: 65 FDDRILSGVGKTLLLTVLAMAIGIVGGILLAVMRLS-KNPVTSSIAWFYIWFFRGTPVLV 123 Query: 73 QLFVIFYGLPHIGIVFD-----------------SFVAIIISLTLNFSAYISEIIRSSII 115 QL V F ++G+VF+ F+ ++ L LN +AY++EI R+ ++ Sbjct: 124 QLIVWF----NLGLVFEYINLGPFYKDEWSDFMTPFLTALLGLGLNEAAYMAEICRAGLL 179 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ +GQ +AS+A+G++ +T+R I++PQ + P +E I++LK+TS+ S + PE+ Sbjct: 180 SVDEGQTEASHALGMSHAKTLRRIVVPQAMRVIVPPTGNEVINMLKTTSLVSVVQYPELL 239 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + AQ I T+ P + A YL+LTS + Q +E Sbjct: 240 RAAQDIGQTSGAPAEMLFLAAAWYLLLTSVFSVGQYYLE 278 >gi|149012202|ref|ZP_01833311.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP19-BS75] gi|147763804|gb|EDK70738.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP19-BS75] Length = 521 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/223 (33%), Positives = 126/223 (56%), Gaps = 11/223 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISLIMHFY 61 +++ QLL A +TL I+ + + LIIG I V R I+ ++ I++ Y Sbjct: 288 ENWQQLLRGA-GITLLISIVGTITGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVY 346 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R I+++ KG Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILAVDKG 406 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 407 QFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNT 466 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + + TYQ + +A +Y +LT I IE + TY+ Sbjct: 467 VATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRMDMDTYT 509 >gi|307704003|ref|ZP_07640937.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus mitis SK597] gi|307622469|gb|EFO01472.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus mitis SK597] Length = 521 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/224 (33%), Positives = 129/224 (57%), Gaps = 13/224 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISLIMHFY 61 +++ QLL A +TL I+ + + LIIG I V R I+ ++ I++ Y Sbjct: 288 ENWQQLLRGA-GITLLISIVGTITGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVY 346 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R I+++ KG Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILAVDKG 406 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 407 QFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNT 466 Query: 181 IVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQHTYS 223 + + TYQ + +A +Y +LT + I++ IE + TY+ Sbjct: 467 VATQTYQYFQTFTIIAVIYFVLTFTVTRILRF-IERRMDMDTYT 509 >gi|326560584|gb|EGE10965.1| octopine transport system permease protein OccM [Moraxella catarrhalis 103P14B1] gi|326565590|gb|EGE15753.1| octopine transport system permease protein OccM [Moraxella catarrhalis 12P80B1] gi|326568464|gb|EGE18544.1| octopine transport system permease protein OccM [Moraxella catarrhalis BC7] gi|326573965|gb|EGE23915.1| octopine transport system permease protein OccM [Moraxella catarrhalis O35E] Length = 241 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/232 (33%), Positives = 134/232 (57%), Gaps = 15/232 (6%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMH 59 M + W II+ FP LL AA V T+ + +S + L+ G + + R+ S + + I Sbjct: 1 MNWNW-QAIINYFPDLL-AASVTTIELVVLSCALGLVFGVILGLWRL--SPVLWLRAIPA 56 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV----------AIIISLTLNFSAYISEI 109 Y++ FRGTPLLVQ+F+I+YGL + +SF+ II+ TLN SAYI EI Sbjct: 57 TYIFFFRGTPLLVQIFLIYYGLGQFTALKESFLWDPIFSQAYWCAIIAFTLNTSAYIGEI 116 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 +R +++++P G+ +A+ AIG++++Q + +ILP+ S+E I +LK +++A++I Sbjct: 117 VRGAVMAVPTGELEAADAIGMSKQQKLHRVILPRAFGIMIPAYSNEVIFMLKGSALAASI 176 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 T+ E+ A+ I+S TY L ++ +YL+++ I + E V +H Sbjct: 177 TVVELTHKARDIISITYLHLEMFFAAGVIYLVISWVFLFIFRQFEHRVNRHK 228 >gi|149003550|ref|ZP_01828424.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP14-BS69] gi|147758486|gb|EDK65485.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP14-BS69] Length = 521 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/224 (33%), Positives = 129/224 (57%), Gaps = 13/224 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISLIMHFY 61 +++ QLL A +TL I+ + + LIIG I V R I+ ++ I++ Y Sbjct: 288 ENWQQLLRGA-GITLLISIVGTITGLIIGLAIGVFRTAPLSENKVIYSLQKLVGWILNVY 346 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R I+++ KG Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILAVDKG 406 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 407 QFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNT 466 Query: 181 IVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQHTYS 223 + + TYQ + +A +Y +LT + I++ IE + TY+ Sbjct: 467 VATQTYQYFQTFTIIAVIYFVLTFTVTRILRF-IERRMDMDTYT 509 >gi|168485585|ref|ZP_02710093.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC1087-00] gi|183571168|gb|EDT91696.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC1087-00] Length = 521 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/224 (33%), Positives = 129/224 (57%), Gaps = 13/224 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISLIMHFY 61 +++ QLL A +TL I+ + + LIIG I V R I+ ++ I++ Y Sbjct: 288 ENWQQLLRGA-GITLLISIVGTITGLIIGLAIGVFRTAPLSENKVIYSLQKLVGWILNVY 346 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R I+++ KG Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILAVDKG 406 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 407 QFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNT 466 Query: 181 IVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQHTYS 223 + + TYQ + +A +Y +LT + I++ IE + TY+ Sbjct: 467 VATQTYQYFQTFTIIAVIYFVLTFTVTRILRF-IERRMDMDTYT 509 >gi|302554086|ref|ZP_07306428.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces viridochromogenes DSM 40736] gi|302471704|gb|EFL34797.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces viridochromogenes DSM 40736] Length = 315 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 123/219 (56%), Gaps = 22/219 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + TL + +S I ++ G +AV+R+ + + S I FY+W FRGTP+LV Sbjct: 65 FDDRILDGVGKTLLLTVLSMAIGIVGGVLLAVMRLS-KNPVTSSIAWFYIWFFRGTPVLV 123 Query: 73 QLFVIFYGLPHIGIVFD-----------------SFVAIIISLTLNFSAYISEIIRSSII 115 QL V F ++G+VF+ F+ ++ L LN +AY++EI R+ ++ Sbjct: 124 QLIVWF----NLGLVFEYINLGPLYKDEWSDFMTPFLTALLGLGLNEAAYMAEICRAGLL 179 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ +GQ +AS+A+G++ +T+R I++PQ + P +E I++LK+TS+ S + PE+ Sbjct: 180 SVDEGQTEASHALGMSHAKTLRRIVIPQAMRVIVPPTGNEVINMLKTTSLVSVVQYPELL 239 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + AQ I T+ P + A YL+LTS + Q +E Sbjct: 240 RAAQDIGQTSGAPAEMLFLAASWYLLLTSVFSVGQYYLE 278 >gi|322376376|ref|ZP_08050869.1| amino acid ABC transporter, permease protein [Streptococcus sp. M334] gi|321282183|gb|EFX59190.1| amino acid ABC transporter, permease protein [Streptococcus sp. M334] Length = 227 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 76/228 (33%), Positives = 122/228 (53%), Gaps = 19/228 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YV 62 F+ + P Y A+V L C+ F +G + V+ F + ++ F YV Sbjct: 3 FSFLPKYLPYFNYGAVVTVLISICVVF-----LGTILGVVLAFGQRSKFKPLVWFANLYV 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 WIFRGTP++VQ+ + F L HI G+ F + I+ +++N AY+SE +R+ Sbjct: 58 WIFRGTPMMVQIMIAF-ALMHINAPTIQVGILGVDFSRLIPGILIISMNSGAYVSETVRA 116 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++PKGQ +A+Y++G+ K +R++ILPQ I L +EFI+I+K +S+ S I + Sbjct: 117 GINAVPKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVM 176 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E++ A + +TTY PL AF YLI+TS + E + Q Sbjct: 177 ELWNGATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKRMGQG 224 >gi|260904822|ref|ZP_05913144.1| polar amino acid ABC transporter, inner membrane subunit [Brevibacterium linens BL2] Length = 245 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 79/216 (36%), Positives = 132/216 (61%), Gaps = 4/216 (1%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++W +++ ++FP+LL +++T+ IA I V+S+II +A++R+ + ++ + Y+ Sbjct: 5 FDW-SVVSNNFPRLL-EGLLLTVEIAVIVIVLSMIIAIPLALLRMSNIE-VVRWLAQLYI 61 Query: 63 WIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 IFR TPLLVQLF ++Y LP + GI ++ II+LTLN +A+++E RS S+P Q Sbjct: 62 EIFRCTPLLVQLFWVYYALPTLTGITIPGTISAIIALTLNLTAFMAEAYRSGFQSVPPEQ 121 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A + LTR Q IRHII+PQ + + S ISI K T++ STI + ++ TA +I Sbjct: 122 VEAGKMLRLTRFQQIRHIIVPQALKQQLPVIMSLNISIFKDTALVSTIAVADLMFTANKI 181 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + +Y+ L I A +Y I+ +I KIE ++ Sbjct: 182 STESYRALEILTVAALMYFIIAFPASLILSKIERNL 217 >gi|288959645|ref|YP_003449986.1| polar amino acid transport system permease protein [Azospirillum sp. B510] gi|288911953|dbj|BAI73442.1| polar amino acid transport system permease protein [Azospirillum sp. B510] Length = 229 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 126/212 (59%), Gaps = 14/212 (6%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +E L+ DS P++L + +TL + S + ++ F +A++R+ + ++ + Sbjct: 1 MNWE---LMWDSLPRML-GGLSLTLQLIIASLALGALVAFAVALLRLS-GNRLVEGLAGA 55 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIR 111 YV+ FRGTPLLVQ+F+I++GL ++ +S + I++LTLN AY SE++R Sbjct: 56 YVFFFRGTPLLVQIFLIYFGLGQFDLIKNSILWPFLREPYWCAILALTLNTGAYTSEVLR 115 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 +I+S+P+GQ +A+ A G++R R I+LP I +E I ++K+TS+ASTIT+ Sbjct: 116 GAILSVPQGQVEAARACGMSRALAFRRIVLPVAIRQMLPAYGNEVILMVKATSLASTITL 175 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+ A+R+++ T+ ++ +YL+L Sbjct: 176 MEVTGIARRMIAQTFAVFELFIVAGAIYLVLN 207 >gi|210620908|ref|ZP_03292325.1| hypothetical protein CLOHIR_00268 [Clostridium hiranonis DSM 13275] gi|210155120|gb|EEA86126.1| hypothetical protein CLOHIR_00268 [Clostridium hiranonis DSM 13275] Length = 206 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 63/165 (38%), Positives = 103/165 (62%), Gaps = 1/165 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 +++ I + + + I+ V+S+ G +A++RI + II + FY+ I RGTPLL+Q+ Sbjct: 2 RIMIEGIKIVVALFAITLVLSIPAGIGVALLRIS-KNVIIRKVTSFYILIMRGTPLLLQM 60 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 VIFYGLP IGI FD F A ++ N++AY +EI R I SI KGQ++A+Y +G + Sbjct: 61 IVIFYGLPLIGITFDRFTAGAVAFFFNYTAYFAEIFRGGIQSIDKGQYEAAYVLGFDKVS 120 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 + IILPQ + P+S+E I+++K TS+ + + +I + +Q Sbjct: 121 MYKRIILPQVVKRVLAPVSNEVITLVKDTSLVYILGLNDILRISQ 165 >gi|288904828|ref|YP_003430050.1| amino acid ABC transporter permease [Streptococcus gallolyticus UCN34] gi|306830860|ref|ZP_07464022.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325977757|ref|YP_004287473.1| amino acid ABC transporter permease [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731554|emb|CBI13109.1| Putative amino acid ABC transporter, permease protein [Streptococcus gallolyticus UCN34] gi|304426883|gb|EFM29993.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177685|emb|CBZ47729.1| amino acid ABC transporter, permease protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 228 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/213 (33%), Positives = 122/213 (57%), Gaps = 12/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 Y +V + AC+ F IIG +A+++ + I++ I FYVW+FRGTP++VQ+ + Sbjct: 15 YGVLVTIMISACVVF-FGTIIGILVALVK-RTNIKILNWIASFYVWVFRGTPMVVQIMIA 72 Query: 78 FY----------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 F G + + F + II ++LN AYISEI+R+ I ++PKGQ +A+Y+ Sbjct: 73 FAWMHFNNAPIVGFGVLDLDFSRLLPGIIIISLNSGAYISEIVRAGIEAVPKGQLEAAYS 132 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ +R++ILPQ + L +EFI+I+K +S+ TI + E++ AQ +V+ TY Sbjct: 133 LGIRPVNAMRYVILPQALKNILPALGNEFITIIKDSSLLQTIGVMELWNGAQSVVTATYL 192 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P+ AF YL++T+ + ++E + Sbjct: 193 PITPLLFAAFYYLMVTTVMSFLVKRLEKRMGNG 225 >gi|323342023|ref|ZP_08082256.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464448|gb|EFY09641.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Erysipelothrix rhusiopathiae ATCC 19414] Length = 537 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 118/200 (59%), Gaps = 11/200 (5%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIR-IFFSDT----------IISLIMHFYVW 63 +L + +TL IA LIIG FIA +R I SD I+++I+ YV Sbjct: 300 KLFLNGLGITLLIALTGTSFGLIIGLFIAGLRQIKISDRDKGITRLFKRIMNVIVTAYVQ 359 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RGTP++VQ +I+YGL + + A II +++N SAY+SEIIR+ I +I KGQ + Sbjct: 360 YLRGTPMMVQGILIYYGLRGLEVAISPLTAGIIIISINTSAYMSEIIRAGIQAIDKGQNE 419 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++G+T QT+R++ILPQ I + + +EF+ +K +SV + IT+ E+F R+ Sbjct: 420 AARSLGMTEAQTLRYVILPQAIRNAIPAIGNEFVVNIKDSSVLNVITVSELFFQGNRLTG 479 Query: 184 TTYQPLIIYCELAFVYLILT 203 Y+ + + ++ +YL+LT Sbjct: 480 IYYRQMEPFFIVSLIYLVLT 499 >gi|10954822|ref|NP_053242.1| hypothetical protein pTi-SAKURA_p003 [Agrobacterium tumefaciens] gi|16119837|ref|NP_396542.1| ABC transporter, membrane spanning protein (nopaline) [Agrobacterium tumefaciens str. C58] gi|548381|sp|P35113|NOCM_AGRT5 RecName: Full=Nopaline transport system permease protein nocM gi|154755|gb|AAA50513.1| transport protein [Agrobacterium tumefaciens] gi|6498175|dbj|BAA87627.1| tiorf2 [Agrobacterium tumefaciens] gi|15163491|gb|AAK90983.1| ABC transporter, membrane spanning protein (nopaline) [Agrobacterium tumefaciens str. C58] Length = 241 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 80/207 (38%), Positives = 127/207 (61%), Gaps = 12/207 (5%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 LII+SFP+LL AA+ TL +A IS +I ++ +A++R+ + I+S + + YV+I R Sbjct: 4 QLIIESFPKLL-AAVPTTLTLAFISLLIGFVVSVPVALMRLS-KNRIVSSLAYGYVYIIR 61 Query: 67 GTPLLVQLFVIFYG-------LPHIGI---VFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 TPLLVQ+F+I+YG L +G+ + + I++L LN +AY SEIIR I S Sbjct: 62 STPLLVQMFLIYYGSAQFRGVLSEVGLWSSFREPWFCAILALALNTAAYTSEIIRGGIQS 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + GQ +A+ A+G++ R I+ P I + +E + I+KSTS+ASTITI E+ Sbjct: 122 VSLGQIEAARAVGMSTFLQFRRIVFPIAIRQALPAYGNEVMLIIKSTSLASTITIVEVTG 181 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A++I+S TY P+ ++ +YL +T Sbjct: 182 LAKQIISATYSPVEVFIVAGAIYLFIT 208 >gi|332312180|gb|EGJ25275.1| Permease [Listeria monocytogenes str. Scott A] Length = 221 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 74/215 (34%), Positives = 125/215 (58%), Gaps = 7/215 (3%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 + I++ P LL A TL + ++ V S+ +G +AV I + I++ Y+W Sbjct: 7 RMMDYIMEILPALLDGA-KTTLLVFAVTLVCSIPLGAVVAVGNIS-KIAPLKFILNIYIW 64 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I RGTPLL+QL I+YGLP IG+VFD A+ I+ LN++AY +EI R +SI GQ++ Sbjct: 65 IMRGTPLLLQLIFIYYGLPIIGVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENGQYE 124 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 ++ +GLT QT+R I+LPQ + + +E I+++K +S+ + I ++ + + +S Sbjct: 125 SAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKIAMS 184 Query: 184 --TTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 T PL++ +A +YL LT+ I+ ++E Sbjct: 185 RDVTLIPLVL---VAAIYLALTAILTILFKQLEKR 216 >gi|270293390|ref|ZP_06199599.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus sp. M143] gi|270278239|gb|EFA24087.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus sp. M143] Length = 520 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 119/203 (58%), Gaps = 11/203 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISLIMHFY 61 +++ QLL A +TL I+ I + LIIG I V R I+ ++ I++ Y Sbjct: 287 ENWQQLLRGA-GITLLISIIGTIAGLIIGLAIGVFRTAPLSENKAIYGLQKLLGWILNVY 345 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R I+++ KG Sbjct: 346 IEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILAVDKG 405 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ A+G+T QT+R ++LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 406 QFEAATALGMTHNQTMRKVVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNT 465 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + + TYQ + +A +Y +LT Sbjct: 466 VATQTYQYFQTFTIIAVIYFVLT 488 >gi|330833503|ref|YP_004402328.1| amino acid ABC transporter amino acid-binding protein/permease [Streptococcus suis ST3] gi|329307726|gb|AEB82142.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus suis ST3] Length = 521 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 74/228 (32%), Positives = 125/228 (54%), Gaps = 11/228 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISL 56 +N++++++ QLL +TL I+ + +I IG I V R + ++ Sbjct: 282 WNIVVNNWQQLLRG-TGMTLLISILGTIIGTAIGLLIGVFRTAPKAANKALAIGQKVLGW 340 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 I++ Y+ IFRGTP++VQ VI+YG G+ D +A I +++N AY+SEI+R I Sbjct: 341 IINIYIEIFRGTPMIVQSMVIYYGTAQAFGLNLDRTLAAIFIVSINTGAYMSEIVRGGIF 400 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ KGQ++A+ A+G T QT+R I+LPQ I +EF+ +K TSV + I++ E++ Sbjct: 401 AVDKGQFEAATALGFTHNQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVVELY 460 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + + + TYQ + +A +Y ILT I +E TY+ Sbjct: 461 FSGNTVATQTYQYFQTFTVIAIIYFILTFTVTRILRAVEKHFDTDTYT 508 >gi|323498512|ref|ZP_08103505.1| polar amino acid ABC transporter inner membrane subunit [Vibrio sinaloensis DSM 21326] gi|323316401|gb|EGA69419.1| polar amino acid ABC transporter inner membrane subunit [Vibrio sinaloensis DSM 21326] Length = 315 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 122/187 (65%), Gaps = 6/187 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++ T+ I+ S VI+L +G I ++RI S+ + + Y+ I RGTPLLVQ+F++++ Sbjct: 116 GVITTVKISLWSLVIALALGLVIGLMRIS-SNPALKKLSIVYIEIIRGTPLLVQIFIVYF 174 Query: 80 GLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 IG V D F A +I+L++ +AY++EI+RS I SIPKGQ +A+ ++G+ + + Sbjct: 175 ---FIGTVLDLERFTAGVIALSVFTAAYVAEIVRSGIQSIPKGQMEAARSLGMNYPKAMI 231 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 ++ILPQ + PL+ +FI+++K +S+ S I+I ++ + + +VS ++ P ++ +A Sbjct: 232 YVILPQAFKQTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSGSFAPFEVWFTVAA 291 Query: 198 VYLILTS 204 +YLILTS Sbjct: 292 LYLILTS 298 >gi|257882304|ref|ZP_05661957.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|294623622|ref|ZP_06702460.1| amino acid ABC transporter, permease protein [Enterococcus faecium U0317] gi|257817962|gb|EEV45290.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|291596948|gb|EFF28161.1| amino acid ABC transporter, permease protein [Enterococcus faecium U0317] Length = 213 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 74/211 (35%), Positives = 123/211 (58%), Gaps = 5/211 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-IRIFFSDTIISLIMHFYVWIFRG 67 +I+ PQLL A+ TL + + + SL +G +A+ + + F + ++ YVW+ RG Sbjct: 4 LIEVMPQLLVGALT-TLKLFLFTLIGSLPLGIVLALGLSLHFKP--LRYLLQTYVWVMRG 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL IFYGLP IGIVFD F A +I+ LN++AY +EI R I SIP+GQ++A+ Sbjct: 61 TPLLLQLIFIFYGLPTIGIVFDRFEAALIAFILNYAAYFAEIFRGGIQSIPQGQYEAAQV 120 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 + L+ QT+ I++PQ + +E I+++K +S+ + + ++ + A +I Sbjct: 121 LQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYILGLGDVMR-AGKIAMERDA 179 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 L+ +A +YL LT II ++E + Sbjct: 180 TLLPLLGVAIIYLTLTGILTIIMKQVEGKLN 210 >gi|188590807|ref|YP_001795407.1| high-affinity glutamine transporter, ABC transporter [Cupriavidus taiwanensis LMG 19424] gi|170937701|emb|CAP62685.1| high-affinity glutamine transport protein, ABC transporter, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 222 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 79/209 (37%), Positives = 130/209 (62%), Gaps = 1/209 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ + +P +L+ A++ AC + V+ ++G + + R+ +I I YV Sbjct: 5 FSPVFAGWPDILHGAVITVQVTAC-ALVLGCVMGLLVGIGRLDPKRRVIYGICTAYVTFI 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF++F+GLP I+ +FV +I L + AY+SEI+R +I S+ KGQ +A+ Sbjct: 64 RGTPLLVQLFLLFFGLPQFNILLPAFVCGVIGLGIYSGAYVSEIVRGAIQSVDKGQMEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IG++ Q +R IILPQ I PL +EFI+++K++++ S +TI ++ Q+I+S + Sbjct: 124 RSIGMSSGQAMRAIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISVS 183 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Y+ L +Y +A VYLILTS +I + E Sbjct: 184 YRSLEVYLAIALVYLILTSAAGLILRRAE 212 >gi|15902771|ref|NP_358321.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6] gi|15458319|gb|AAK99531.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae R6] Length = 229 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 123/227 (54%), Gaps = 19/227 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM---HFYV 62 F+ + P Y A+V L C+ F +G + V+ F + ++ + YV Sbjct: 5 FSFLPKYLPYFNYGAVVTILISICVIF-----LGTILGVVLAFGQRSKFKPLVWLANLYV 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 WIFRGTP++VQ+ + F L HI G+ F + I+ +++N AY+SEI+R+ Sbjct: 60 WIFRGTPMMVQIMIAF-ALMHINAPTIQIGILGVDFSRLIPGILIISMNSGAYVSEIVRA 118 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++PKGQ +A+Y++G+ K +R++ILPQ + L +EFI+I+K +S+ S I + Sbjct: 119 GINAVPKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVM 178 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 E++ A + +TTY PL AF YLI+TS + E + Q Sbjct: 179 ELWNGATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQ 225 >gi|18309583|ref|NP_561517.1| amino acid ABC transporter [Clostridium perfringens str. 13] gi|18144260|dbj|BAB80307.1| probable amino acid ABC transporter [Clostridium perfringens str. 13] Length = 223 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 127/205 (61%), Gaps = 11/205 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLIMHFY 61 F+ + + FP L A TL I+ I+ ++ ++G + ++ F I+ +I Y Sbjct: 6 FSFLKEYFPVFLEGA-KWTLIISAITVILGALLGTILCFMKRSKFSIFKVKILRVISTAY 64 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V + RGTPLL+Q++++++GLP GI + ++ II+++LN +AY+SEIIR+ I ++ KGQ Sbjct: 65 VEVIRGTPLLLQIYIVYFGLPSFGIQLEVLLSCIIAISLNSAAYVSEIIRAGIDAVDKGQ 124 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++G+T +R IILPQ I + +EF++I+K +S+ASTI + E+ +++ + Sbjct: 125 LEAARSLGMTEGMAMRLIILPQAIKNILPAIGNEFVAIIKESSMASTIGVAELMYSSKIV 184 Query: 182 VSTTY---QPLIIYCELAFVYLILT 203 TY +PLI+ +A Y ++T Sbjct: 185 TGATYKGFEPLIV---IAMFYFVMT 206 >gi|291454091|ref|ZP_06593481.1| permease [Streptomyces albus J1074] gi|291357040|gb|EFE83942.1| permease [Streptomyces albus J1074] Length = 286 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/219 (34%), Positives = 126/219 (57%), Gaps = 22/219 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + + TL + +S VI ++ G +AV+R+ + ++S I FY+W FRGTP+LV Sbjct: 39 FNDRILSGVRETLILTVLSMVIGVVGGVLLAVMRLS-KNPVVSSIAWFYIWFFRGTPVLV 97 Query: 73 QLFVIFYGLPHIGIVFD-----------------SFVAIIISLTLNFSAYISEIIRSSII 115 QLFV F ++G VF+ F+ ++ L LN +AY++EI R+ ++ Sbjct: 98 QLFVWF----NLGFVFEYMNLGPFYKDEWSDFMTPFLTALLGLGLNEAAYMAEICRAGLL 153 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ +GQ +A++A+G+++ +T+R I+LPQ + P +E I++LK+TS+ + + E+F Sbjct: 154 SVDEGQTEAAHALGMSQGKTLRRIVLPQAMRVIVPPTGNEVINMLKTTSLVAAVQYYELF 213 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + AQ I T+ + A YLILTS I Q IE Sbjct: 214 KHAQDIGMTSGATVEALFLAATWYLILTSILSIGQYYIE 252 >gi|258611907|ref|ZP_05711708.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503] gi|293596367|ref|ZP_05231017.2| amino acid ABC transporter [Listeria monocytogenes FSL J1-194] gi|293596977|ref|ZP_05266174.2| amino acid ABC transporter [Listeria monocytogenes HPB2262] gi|300765936|ref|ZP_07075908.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL N1-017] gi|258607029|gb|EEW19637.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503] gi|293584368|gb|EFF96400.1| amino acid ABC transporter [Listeria monocytogenes HPB2262] gi|293595255|gb|EFG03016.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194] gi|300513322|gb|EFK40397.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL N1-017] Length = 214 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 125/212 (58%), Gaps = 7/212 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + I++ P LL A TL + ++ V S+ +G +AV I + I++ Y+WI R Sbjct: 3 DYIMEILPALLDGA-KTTLLVFAVTLVCSIPLGAVVAVGNIS-KIAPLKFILNIYIWIMR 60 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL I+YGLP IG+VFD A+ I+ LN++AY +EI R +SI GQ++++ Sbjct: 61 GTPLLLQLIFIYYGLPIIGVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENGQYESAK 120 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--T 184 +GLT QT+R I+LPQ + + +E I+++K +S+ + I ++ + + +S Sbjct: 121 VLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDV 180 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 T PL++ +A +YL LT+ I+ ++E Sbjct: 181 TLIPLVL---VAAIYLALTAILTILFKQLEKR 209 >gi|116516598|ref|YP_816212.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] gi|149021689|ref|ZP_01835720.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP23-BS72] gi|116077174|gb|ABJ54894.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] gi|147930150|gb|EDK81136.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP23-BS72] gi|301793968|emb|CBW36365.1| putative amino acid ABC transporter permease protein [Streptococcus pneumoniae INV104] gi|332204826|gb|EGJ18891.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA47901] Length = 227 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 123/227 (54%), Gaps = 19/227 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM---HFYV 62 F+ + P Y A+V L C+ F +G + V+ F + ++ + YV Sbjct: 3 FSFLPKYLPYFNYGAVVTILISICVIF-----LGTILGVVLAFGQRSKFKPLVWLANLYV 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 WIFRGTP++VQ+ + F L HI G+ F + I+ +++N AY+SEI+R+ Sbjct: 58 WIFRGTPMMVQIMIAF-ALMHINAPTIQIGILGVDFSRLIPGILIISMNSGAYVSEIVRA 116 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++PKGQ +A+Y++G+ K +R++ILPQ + L +EFI+I+K +S+ S I + Sbjct: 117 GINAVPKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVM 176 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 E++ A + +TTY PL AF YLI+TS + E + Q Sbjct: 177 ELWNGATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQ 223 >gi|169342343|ref|ZP_02863411.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens C str. JGS1495] gi|169299568|gb|EDS81631.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens C str. JGS1495] Length = 223 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 127/205 (61%), Gaps = 11/205 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLIMHFY 61 F+ + + FP L A TL I+ I+ ++ ++G + ++ F I+ +I Y Sbjct: 6 FSFLKEYFPVFLEGA-KWTLIISAITVILGALLGTILCFMKRSKFSIFKVKILRVISTAY 64 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V + RGTPLL+Q++++++GLP GI + + II+++LN +AY+SEIIR+ I ++ KGQ Sbjct: 65 VEVIRGTPLLLQIYIVYFGLPSFGIQLEVLPSCIIAISLNSAAYVSEIIRAGIDAVDKGQ 124 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++G+T + +R IILPQ I + +EF++I+K +S+ASTI + E+ +++ + Sbjct: 125 LEAARSLGMTERMAMRLIILPQAIKNILPAIGNEFVAIIKESSMASTIGVAELMYSSKIV 184 Query: 182 VSTTY---QPLIIYCELAFVYLILT 203 TY +PLI+ +A Y ++T Sbjct: 185 TGATYKGFEPLIV---IAMFYFVMT 206 >gi|160935369|ref|ZP_02082751.1| hypothetical protein CLOBOL_00264 [Clostridium bolteae ATCC BAA-613] gi|158441727|gb|EDP19427.1| hypothetical protein CLOBOL_00264 [Clostridium bolteae ATCC BAA-613] Length = 215 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 71/196 (36%), Positives = 113/196 (57%), Gaps = 4/196 (2%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 S+ +LL ++TL ++ + S ++G ++ + I ++ YV +FRG PLL Sbjct: 9 SYWRLLLDGFLITLKLSLTVIITSTLLGVICGML-FTLKNRGIRGVLRIYVELFRGCPLL 67 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +QLF+ +YGL ++GI D F A+++ TL AYI+EIIRS I SIPKGQW+A+ IGL Sbjct: 68 MQLFMGYYGLAYLGIQIDIFSAVVLVYTLYGGAYIAEIIRSGIESIPKGQWEAAKCIGLN 127 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 +R ++LPQ+ S L + ++K TS+AS I E+ + + I++ T P Sbjct: 128 PVDVLRDVVLPQSFKISLPALIGFHLGLIKDTSIASIIGYSELLREGKTIMNVTGYPFET 187 Query: 192 YCELAFVYLILTSFCY 207 Y +A +Y I+ CY Sbjct: 188 YILVAVIYFII---CY 200 >gi|222153406|ref|YP_002562583.1| amino acid ABC transporter permease [Streptococcus uberis 0140J] gi|222114219|emb|CAR42794.1| putative amino acid ABC transporter permease protein [Streptococcus uberis 0140J] Length = 229 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 77/213 (36%), Positives = 128/213 (60%), Gaps = 14/213 (6%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 Y IV + AC+ F IIG I ++ S T + + +FYVWIFRGTP++VQ+ + Sbjct: 15 YGVIVTIMISACVVF-FGTIIGVLITFVKRS-SFTPLKWLANFYVWIFRGTPMVVQIMIA 72 Query: 78 F-----YGLP--HIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 F +P + G++ F + II ++LN AYISEI+R+ I ++PKGQ +A+Y+ Sbjct: 73 FAWMHFNNMPTVNFGVLDLDFSRLLPGIIIISLNSGAYISEIVRAGIEAVPKGQLEAAYS 132 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ K +R++ILPQ L +EFI+I+K +++ TI + E++ AQ +V++TY Sbjct: 133 LGIRPKNAMRYVILPQAFKNILPALGNEFITIIKDSALLQTIGVMELWNGAQTVVTSTYL 192 Query: 188 PLIIYCELAFVYLILTS-FCYIIQIKIESSVTQ 219 P+ AF YL++T+ Y++ I +E+ + Q Sbjct: 193 PITPLLFAAFYYLMVTTVLSYLLTI-LENKMGQ 224 >gi|46907970|ref|YP_014359.1| amino acid ABC transporter permease [Listeria monocytogenes serotype 4b str. F2365] gi|226224343|ref|YP_002758450.1| amino acid (glutamine) ABC transporter, permease protein [Listeria monocytogenes Clip81459] gi|255520514|ref|ZP_05387751.1| hypothetical protein LmonocFSL_04656 [Listeria monocytogenes FSL J1-175] gi|46881240|gb|AAT04536.1| amino acid ABC transporter, permease protein [Listeria monocytogenes serotype 4b str. F2365] gi|225876805|emb|CAS05514.1| Putative amino acid (glutamine) ABC transporter, permease protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|328473974|gb|EGF44790.1| hypothetical protein LM220_02221 [Listeria monocytogenes 220] Length = 213 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 125/212 (58%), Gaps = 7/212 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + I++ P LL A TL + ++ V S+ +G +AV I + I++ Y+WI R Sbjct: 2 DYIMEILPALLDGA-KTTLLVFAVTLVCSIPLGAVVAVGNIS-KIAPLKFILNIYIWIMR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL I+YGLP IG+VFD A+ I+ LN++AY +EI R +SI GQ++++ Sbjct: 60 GTPLLLQLIFIYYGLPIIGVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENGQYESAK 119 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--T 184 +GLT QT+R I+LPQ + + +E I+++K +S+ + I ++ + + +S Sbjct: 120 VLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDV 179 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 T PL++ +A +YL LT+ I+ ++E Sbjct: 180 TLIPLVL---VAAIYLALTAILTILFKQLEKR 208 >gi|307704889|ref|ZP_07641780.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK597] gi|307621503|gb|EFO00549.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK597] Length = 227 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/228 (32%), Positives = 122/228 (53%), Gaps = 19/228 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM---HFYV 62 F+ + P Y A+V L C+ F +G + V+ F + ++ + YV Sbjct: 3 FSFLPKYLPYFNYGAVVTVLISICVVF-----LGTILGVVLAFGQRSKFKPLVWLANLYV 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 WIFRGTP++VQ+ + F L HI G+ F + I+ +++N AY+SE +R+ Sbjct: 58 WIFRGTPMMVQIMIAF-ALMHINAPTIQVGILGVDFSRLIPGILIISMNSGAYVSETVRA 116 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++PKGQ +A+Y++G+ K +R++ILPQ I L +EFI+I+K +S+ S I + Sbjct: 117 GINAVPKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVM 176 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E++ A + +TTY PL AF YLI+TS + E + Q Sbjct: 177 ELWNGATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKRMGQG 224 >gi|146321731|ref|YP_001201442.1| amino acid ABC transporter amino acid-binding protein/permease [Streptococcus suis 98HAH33] gi|253752541|ref|YP_003025682.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis SC84] gi|253754367|ref|YP_003027508.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis P1/7] gi|253756301|ref|YP_003029441.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis BM407] gi|145692537|gb|ABP93042.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus suis 98HAH33] gi|251816830|emb|CAZ52475.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis SC84] gi|251818765|emb|CAZ56603.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis BM407] gi|251820613|emb|CAR47371.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis P1/7] gi|292559150|gb|ADE32151.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus suis GZ1] gi|319758952|gb|ADV70894.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus suis JS14] Length = 521 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 119/208 (57%), Gaps = 11/208 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISL 56 +N++++++ QLL +TL I+ + +I IG I V R + ++ Sbjct: 282 WNIVVNNWQQLLRG-TGMTLLISILGTIIGTAIGLLIGVFRTAPKAANKALAIGQKVLGW 340 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 I++ Y+ IFRGTP++VQ VI+YG G+ D +A I +++N AY+SEI+R I Sbjct: 341 IINIYIEIFRGTPMIVQSMVIYYGTAQAFGLNLDRTLAAIFIVSINTGAYMSEIVRGGIF 400 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ KGQ++A+ A+G T QT+R I+LPQ I +EF+ +K TSV + I++ E++ Sbjct: 401 AVDKGQFEAATALGFTHNQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVVELY 460 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + + TYQ + +A +Y ILT Sbjct: 461 FSGNTVATQTYQYFQTFTVIAIIYFILT 488 >gi|99078017|ref|YP_611275.1| amino acid ABC transporter permease [Ruegeria sp. TM1040] gi|99035155|gb|ABF62013.1| Amino acid ABC transporter permease protein 3-TM region His/Glu/Gln/Arg/opine [Ruegeria sp. TM1040] Length = 216 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 118/200 (59%), Gaps = 4/200 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL +A I +L++ +AV R+F ++ + ++ FRGTPLLVQLF+ +YGLP Sbjct: 14 LTLFMAVIGMACALVLASILAVERVF-QIPVLDAFVRLFISFFRGTPLLVQLFLFYYGLP 72 Query: 83 HI-GIV--FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + G + D A I+ LTL+FSAY++E IR++I+ + + QW+A+ A+G+T+ Q +R I Sbjct: 73 QVLGFLGSIDGVTATIMGLTLHFSAYMAESIRAAILGVDRSQWEAAQAVGMTQGQMMRQI 132 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ +A L + FI ++K TS+A T+ + E+ Q+ + ++ + A +Y Sbjct: 133 ILPQAARVAAPTLVNYFIDMIKGTSLAFTLGVTELMGATQKEAAGSFLYFEAFLVAAAIY 192 Query: 200 LILTSFCYIIQIKIESSVTQ 219 IL Q +E+ + + Sbjct: 193 WILVEALSFGQRHLETYLNK 212 >gi|323438846|gb|EGA96583.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus O11] Length = 467 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 124/202 (61%), Gaps = 6/202 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ I + I+G F+A++++ +IS I Y+ I RGTP+LVQ+F++F+ Sbjct: 266 GIKITILISLIGVALGSILGAFVALMKLS-KIKVISWIASIYIEILRGTPMLVQVFIVFF 324 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G+ +G+ + V I+L +N SAYI+EIIR+ I ++ KGQ +A+ + GL +QT++ Sbjct: 325 GITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSFGLNYRQTMKS 384 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCEL 195 +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ PL++ L Sbjct: 385 VIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAAL 444 Query: 196 AFVY-LILTSFCYIIQIKIESS 216 FV +LT +I+ ++ +S Sbjct: 445 YFVLTFVLTRIMNMIEGRLNAS 466 >gi|288554810|ref|YP_003426745.1| amino acid ABC transporter permease [Bacillus pseudofirmus OF4] gi|288545970|gb|ADC49853.1| amino acid ABC transporter permease [Bacillus pseudofirmus OF4] Length = 233 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 76/229 (33%), Positives = 134/229 (58%), Gaps = 14/229 (6%) Query: 4 EWFN-----------LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT 52 EWFN L ++S P LL + VT+ IA S V +LI+G + + R+ Sbjct: 3 EWFNQIQWEYLYDPELAVNSLPFLL-EGLKVTMIIALFSMVFALILGLLLGIARMS-KYW 60 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS-FVAIIISLTLNFSAYISEIIR 111 I Y+ RGTPLLV +F+++YG+P +G+ F S VA I+ ++LNF+AY +E++R Sbjct: 61 FIRWPAKIYISFMRGTPLLVFIFILYYGIPVLGVEFKSAIVAGIVGISLNFAAYNAEVVR 120 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S+I+S+P+GQW+A+ ++ ++ QT+R +I+PQ + P + F+ I+K TS+AS IT+ Sbjct: 121 SAIMSVPRGQWEAAASLQMSYVQTLRRVIIPQATRIALPPTFNIFMDIVKGTSLASVITV 180 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E+ +++ + T+ + +Y A +Y ++ Q ++E ++ Sbjct: 181 QELLYSSRLVAGRTFDSMTMYITAALIYWVVCIIIGYFQERLEKRYNRY 229 >gi|238927936|ref|ZP_04659696.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas flueggei ATCC 43531] gi|238884269|gb|EEQ47907.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas flueggei ATCC 43531] Length = 214 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 57/174 (32%), Positives = 110/174 (63%), Gaps = 3/174 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-FFSDTIISLIMHFYVWIFRGTPLLVQ 73 +L+ +TL I C++ ++L +G F A+ R+ F +S ++ Y+WI RGTPL++Q Sbjct: 9 RLMLEGSTITLEIFCVTLALALPLGLFAALGRLSHFRP--LSRMLEIYIWIMRGTPLMLQ 66 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 L +++ LP +GI+ A +++ LN++AY +EI R+ I ++P+GQ++A+ +G++ Sbjct: 67 LLFVYFALPMVGILLPDIAAALLAFILNYAAYFAEIFRAGIQAVPRGQFEAARVLGMSAP 126 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 T+R IILPQ + + P+S+E I+++K TS+ + + ++ + A+ IV + Sbjct: 127 LTMRRIILPQVLRITLPPVSNETINLVKDTSLVYILAMNDLLRVARTIVQREFD 180 >gi|302024477|ref|ZP_07249688.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis 05HAS68] Length = 415 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 74/228 (32%), Positives = 125/228 (54%), Gaps = 11/228 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISL 56 +N++++++ QLL +TL I+ + +I IG I V R + ++ Sbjct: 176 WNIVVNNWQQLLRG-TGMTLLISILGTIIGTAIGLLIGVFRTAPKAANKALAIGQKVLGW 234 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 I++ Y+ IFRGTP++VQ VI+YG G+ D +A I +++N AY+SEI+R I Sbjct: 235 IINIYIEIFRGTPMIVQSMVIYYGTAQAFGLNLDRTLAAIFIVSINTGAYMSEIVRGGIF 294 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ KGQ++A+ A+G T QT+R I+LPQ I +EF+ +K TSV + I++ E++ Sbjct: 295 AVDKGQFEAATALGFTHNQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVVELY 354 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + + + TYQ + +A +Y ILT I +E TY+ Sbjct: 355 FSGNTVATQTYQYFQTFTVIAIIYFILTFTVTRILRAVEKHFDTDTYT 402 >gi|260769396|ref|ZP_05878329.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP 102972] gi|260614734|gb|EEX39920.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP 102972] Length = 314 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 65/199 (32%), Positives = 131/199 (65%), Gaps = 8/199 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ I+ IS + ++++G ++R+ + T +L + YV + RGTPLLVQ+F++++ Sbjct: 118 VTIEISFISLIFAVLLGLIFGLMRVAKNQTARNLALT-YVELIRGTPLLVQIFIVYF--- 173 Query: 83 HIGIV--FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 IG V FD F A +++L++ AY++EI+R+ I +IP GQ +A+ ++G+T + +R++I Sbjct: 174 FIGTVLDFDRFTAGVVALSVFTGAYVAEIVRAGIQAIPNGQMEAARSLGMTYPKAMRYVI 233 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LPQ + + PL+ +FI+++K +S+ S I+I ++ + + +VS ++ P ++ +A +YL Sbjct: 234 LPQALKRTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSGSFAPFEVWFTVAALYL 293 Query: 201 ILTS-FCYIIQIKIESSVT 218 ++T + IQ ++E ++ Sbjct: 294 LVTGTLSWAIQ-RLEKRLS 311 >gi|257885498|ref|ZP_05665151.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257821354|gb|EEV48484.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] Length = 213 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 123/211 (58%), Gaps = 5/211 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-IRIFFSDTIISLIMHFYVWIFRG 67 +I+ PQLL A+ TL + + + SL +G +A+ + + F + ++ YVW+ RG Sbjct: 4 LIEVMPQLLVGALT-TLKLFLFTLIGSLPLGIILALGLSLHFKP--LRYLLQTYVWVMRG 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL IFYGLP IGIVFD F A +I+ LN++AY +EI R I SIP+GQ++A+ Sbjct: 61 TPLLLQLIFIFYGLPTIGIVFDRFEAALIAFILNYAAYFAEIFRGGIQSIPQGQYEAAQV 120 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 + L+ QT+ I++PQ + +E I+++K +S+ + + ++ + A +I Sbjct: 121 LQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYILGLGDVMR-AGKIAMERDA 179 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 L+ +A +YL LT I+ ++E + Sbjct: 180 TLLPLLGVAIIYLTLTGILTIVMKQVEGKLN 210 >gi|254993940|ref|ZP_05276130.1| hypothetical protein LmonocytoFSL_13880 [Listeria monocytogenes FSL J2-064] Length = 212 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 125/212 (58%), Gaps = 7/212 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + I++ P LL A TL + ++ V S+ +G +AV I + I++ Y+WI R Sbjct: 1 DYIMEILPALLDGA-KTTLLVFAVTLVCSIPLGAVVAVGNIS-KIAPLKFILNIYIWIMR 58 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL I+YGLP IG+VFD A+ I+ LN++AY +EI R +SI GQ++++ Sbjct: 59 GTPLLLQLIFIYYGLPIIGVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENGQYESAK 118 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--T 184 +GLT QT+R I+LPQ + + +E I+++K +S+ + I ++ + + +S Sbjct: 119 VLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDV 178 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 T PL++ +A +YL LT+ I+ ++E Sbjct: 179 TLIPLVL---VAAIYLALTAILTILFKQLEKR 207 >gi|116873173|ref|YP_849954.1| amino acid ABC transporter, permease protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742051|emb|CAK21175.1| amino acid ABC transporter, permease protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 213 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 125/212 (58%), Gaps = 7/212 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + I++ P LL A TL + ++ V S+ +G +AV I + I++ Y+WI R Sbjct: 2 DYIMEILPALLDGA-KTTLLVFAVTLVCSIPLGAIVAVGNIS-KIAPLKFILNIYIWIMR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL I+YGLP IG+VFD A+ I+ LN++AY +EI R +SI GQ++++ Sbjct: 60 GTPLLLQLIFIYYGLPIIGVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENGQYESAK 119 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--T 184 +GLT QT+R I+LPQ + + +E I+++K +S+ + I ++ + + +S Sbjct: 120 VLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDV 179 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 T PL++ +A +YL LT+ I+ ++E Sbjct: 180 TLIPLVL---VAAIYLALTAILTILFKQLEKR 208 >gi|315181927|gb|ADT88840.1| hypothetical amino acid ABC transporter, permease protein [Vibrio furnissii NCTC 11218] Length = 314 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 65/199 (32%), Positives = 131/199 (65%), Gaps = 8/199 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ I+ IS + ++++G ++R+ + T +L + YV + RGTPLLVQ+F++++ Sbjct: 118 VTIEISFISLIFAVLLGLIFGLMRVAKNQTARNLALT-YVELIRGTPLLVQIFIVYF--- 173 Query: 83 HIGIV--FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 IG V FD F A +++L++ AY++EI+R+ I +IP GQ +A+ ++G+T + +R++I Sbjct: 174 FIGTVLDFDRFTAGVVALSVFTGAYVAEIVRAGIQAIPNGQMEAARSLGMTYPKAMRYVI 233 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LPQ + + PL+ +FI+++K +S+ S I+I ++ + + +VS ++ P ++ +A +YL Sbjct: 234 LPQALKRTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSGSFAPFEVWFTVAALYL 293 Query: 201 ILTS-FCYIIQIKIESSVT 218 ++T + IQ ++E ++ Sbjct: 294 LVTGTLSWAIQ-RLEKRLS 311 >gi|306832994|ref|ZP_07466126.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus bovis ATCC 700338] gi|304424893|gb|EFM28027.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus bovis ATCC 700338] Length = 228 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/213 (32%), Positives = 122/213 (57%), Gaps = 12/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 Y +V + AC+ F IIG +A+++ + +++ I FYVW+FRGTP++VQ+ + Sbjct: 15 YGVLVTIMISACVVF-FGTIIGILVALVK-RTNIKVLNWIASFYVWVFRGTPMVVQIMIA 72 Query: 78 FY----------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 F G + + F + II ++LN AYISEI+R+ I ++PKGQ +A+Y+ Sbjct: 73 FAWMHFNNAPIVGFGVLDLDFSRLLPGIIIISLNSGAYISEIVRAGIEAVPKGQLEAAYS 132 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ +R++ILPQ + L +EFI+I+K +S+ TI + E++ AQ +V+ TY Sbjct: 133 LGIRPVNAMRYVILPQALKNILPALGNEFITIIKDSSLLQTIGVMELWNGAQSVVTATYL 192 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P+ AF YL++T+ + ++E + Sbjct: 193 PITPLLFAAFYYLMVTTVMSFLVKRLEKRMGNG 225 >gi|228912174|ref|ZP_04075889.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis IBL 200] gi|228847511|gb|EEM92450.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis IBL 200] Length = 193 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/189 (37%), Positives = 112/189 (59%), Gaps = 4/189 (2%) Query: 32 FVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG---IVF 88 +IS +IG +A+I + + S I Y+ FRGTPLLVQLFV+++GLP I V Sbjct: 1 MIISFVIGIGLAIITKNKTKYLYS-IARVYISFFRGTPLLVQLFVLYFGLPQIFPTFTVL 59 Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 + A +I L+LN +AY+SEIIR S+ ++ GQ DA ++G+T+ Q +R II PQ I + Sbjct: 60 TAMQATLIGLSLNNAAYLSEIIRGSLNAVESGQMDACLSVGMTKAQAMRQIIFPQAIRVA 119 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 L + F+ +LK +S++ + + EI A+ + + +Y+ + Y +A VY I+T Sbjct: 120 VPSLGNNFVGLLKESSLSFALGVAEILAQAKMLAAQSYRYMESYLAVAIVYWIITIVISW 179 Query: 209 IQIKIESSV 217 Q K+E + Sbjct: 180 GQKKLEKKL 188 >gi|293596721|ref|ZP_06684318.1| amino acid ABC transporter [Listeria monocytogenes J2818] gi|293591776|gb|EFG00111.1| amino acid ABC transporter [Listeria monocytogenes J2818] Length = 221 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 73/213 (34%), Positives = 125/213 (58%), Gaps = 7/213 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + I++ P LL A TL + ++ V S+ +G +AV I + I++ Y+WI Sbjct: 9 MDYIMEILPALLDGA-KTTLLVFAVTLVCSIPLGAVVAVGNIS-KIAPLKFILNIYIWIM 66 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLL+QL I+YGLP IG+VFD A+ I+ LN++AY +EI R +SI GQ++++ Sbjct: 67 RGTPLLLQLIFIYYGLPIIGVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENGQYESA 126 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS-- 183 +GLT QT+R I+LPQ + + +E I+++K +S+ + I ++ + + +S Sbjct: 127 KVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKIAMSRD 186 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 T PL++ +A +YL LT+ ++ ++E Sbjct: 187 VTLIPLVL---VAAIYLALTAILTVLFKQLEKR 216 >gi|319939707|ref|ZP_08014065.1| amino acid-binding permease [Streptococcus anginosus 1_2_62CV] gi|319811125|gb|EFW07434.1| amino acid-binding permease [Streptococcus anginosus 1_2_62CV] Length = 521 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/206 (33%), Positives = 117/206 (56%), Gaps = 11/206 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISLIM 58 ++ D++PQ L A +TL I+ + LIIG I V R + T+ + Sbjct: 284 ILKDNWPQFLRGA-GLTLLISITGTIAGLIIGLLIGVYRTAPTAKNKALALLQTLFGWFL 342 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + Y+ IFRGTP++VQ VI+YG G+ D +A I +++N AY+SEI+R I ++ Sbjct: 343 NVYIEIFRGTPMIVQSMVIYYGTAQAFGVSIDRTIAAIFIVSINTGAYMSEIVRGGIFAV 402 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G+T QT+R ++LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 403 DKGQFEAATALGMTHNQTMRKVVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFS 462 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 I + TYQ + +A +Y +LT Sbjct: 463 GNTIATQTYQYFQTFTIIAVIYFVLT 488 >gi|296135302|ref|YP_003642544.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas intermedia K12] gi|295795424|gb|ADG30214.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas intermedia K12] Length = 310 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/198 (37%), Positives = 120/198 (60%), Gaps = 13/198 (6%) Query: 29 CISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL---FVIFYGLPHIG 85 IS VI + +G +AV+R+ + ++S FY+W+FRGTP+LVQ+ F I P+IG Sbjct: 80 VISMVIGVALGVLLAVMRLSH-NPMVSKASWFYIWLFRGTPVLVQILFWFNITALYPNIG 138 Query: 86 I---VFDS------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 FD+ FVA I++L LN AY++EI+R+ I+S+ +GQ +A A+G++R Q + Sbjct: 139 FGSWSFDANNLITPFVAAILALGLNEGAYMAEIVRAGILSVDEGQSEAGAALGMSRLQIM 198 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 R ++LPQ + P +E IS+LK+TS+ S I + ++ +AQ I S Y+ + + + Sbjct: 199 RRVVLPQAMRVIVPPTGNEAISMLKTTSLVSVIAVSDLLYSAQLIYSVNYRTIPLLLVAS 258 Query: 197 FVYLILTSFCYIIQIKIE 214 YLI+T+ I Q IE Sbjct: 259 IWYLIVTTLLSIGQFYIE 276 >gi|73541283|ref|YP_295803.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134] gi|72118696|gb|AAZ60959.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134] Length = 222 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 79/209 (37%), Positives = 130/209 (62%), Gaps = 1/209 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ + +P +++ AIV AC + V+ ++G + + R+ +I I YV Sbjct: 5 FSPVFSGWPDIVHGAIVTVEVTAC-ALVLGCVMGLLVGIGRLDPKRRVIYSICTAYVTFI 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF++F+GLP I+ +FV +I L + AY+SEI+R +I S+ KGQ +A+ Sbjct: 64 RGTPLLVQLFLLFFGLPQFNIMLPAFVCGVIGLGVYSGAYVSEIVRGAIQSVEKGQMEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IG++ Q +R +ILPQ I PL +EFI+++K++++ S +TI ++ Q+I+S + Sbjct: 124 RSIGMSSGQAMRAVILPQAIVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISVS 183 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Y+ L +Y +A VYLILTS +I + E Sbjct: 184 YRSLEVYLAIALVYLILTSAAGLILRRAE 212 >gi|225181291|ref|ZP_03734736.1| polar amino acid ABC transporter, inner membrane subunit [Dethiobacter alkaliphilus AHT 1] gi|225168071|gb|EEG76877.1| polar amino acid ABC transporter, inner membrane subunit [Dethiobacter alkaliphilus AHT 1] Length = 220 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/204 (34%), Positives = 124/204 (60%), Gaps = 3/204 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+ F+++ D+ P +L A V+T+ I+ ++ ++ +IG + ++++ S + + Sbjct: 1 MRELDFSVVWDNLPFILQGA-VLTVQISAVAVLVGFLIGSVVGLVKLS-SIRPLRFLATA 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ I RGTPLLVQ+ +I++GL + IV D F A +I+L++N AY+ EI+RS I SI K Sbjct: 59 YIEIIRGTPLLVQIVLIYFGLASLNIVSLDRFTAGVIALSINSGAYVGEIVRSGIQSIDK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ ++G+ +++R IILPQ PL +EFI ++K +S+ I E+ Q Sbjct: 119 GQMEAARSLGMNYVRSMRFIILPQAFRRIIPPLVNEFIMLIKDSSLLFAIGFAELMQRGN 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I + TY+ ++ +A VY ++T Sbjct: 179 AIRARTYKDFEVFIGIAAVYFVMT 202 >gi|293364251|ref|ZP_06610977.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] gi|291317097|gb|EFE57524.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] Length = 543 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 74/224 (33%), Positives = 129/224 (57%), Gaps = 13/224 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISLIMHFY 61 +++ QLL A +TL I+ I + L+IG I V R ++ ++ I++ Y Sbjct: 309 ENWQQLLRGA-GITLLISIIGTITGLLIGLAIGVFRTAPLSENKAMYALQKLVGWILNVY 367 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R I+++ KG Sbjct: 368 IEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILAVDKG 427 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 428 QFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNT 487 Query: 181 IVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQHTYS 223 + + TYQ + +A +Y +LT + I++ IE + TY+ Sbjct: 488 VATQTYQYFQTFTIIAVIYFVLTFTVTRILRF-IERRMDMDTYT 530 >gi|294339404|emb|CAZ87760.1| putative ABC-type amino acid transport system, permease component [Thiomonas sp. 3As] Length = 310 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/198 (37%), Positives = 120/198 (60%), Gaps = 13/198 (6%) Query: 29 CISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL---FVIFYGLPHIG 85 IS VI + +G +AV+R+ + ++S FY+W+FRGTP+LVQ+ F I P+IG Sbjct: 80 VISMVIGVALGVLLAVMRLSH-NPMVSKASWFYIWLFRGTPVLVQILFWFNITALYPNIG 138 Query: 86 I---VFDS------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 FD+ FVA I++L LN AY++EI+R+ I+S+ +GQ +A A+G++R Q + Sbjct: 139 FGSWSFDANNLITPFVAAILALGLNEGAYMAEIVRAGILSVDEGQSEAGAALGMSRLQIM 198 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 R ++LPQ + P +E IS+LK+TS+ S I + ++ +AQ I S Y+ + + + Sbjct: 199 RRVVLPQAMRVIVPPTGNEAISMLKTTSLVSVIAVSDLLYSAQLIYSVNYRTIPLLLVAS 258 Query: 197 FVYLILTSFCYIIQIKIE 214 YLI+T+ I Q IE Sbjct: 259 IWYLIVTTLLSIGQFYIE 276 >gi|69248235|ref|ZP_00604685.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Enterococcus faecium DO] gi|257880069|ref|ZP_05659722.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257891160|ref|ZP_05670813.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|257893974|ref|ZP_05673627.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] gi|258614597|ref|ZP_05712367.1| amino acid ABC transporter, permease protein [Enterococcus faecium DO] gi|260560318|ref|ZP_05832494.1| amino acid ABC transporter [Enterococcus faecium C68] gi|261208255|ref|ZP_05922928.1| amino acid ABC transporter [Enterococcus faecium TC 6] gi|289565943|ref|ZP_06446382.1| amino acid ABC transporter [Enterococcus faecium D344SRF] gi|293553343|ref|ZP_06673979.1| amino acid ABC transporter, permease protein [Enterococcus faecium E1039] gi|293563074|ref|ZP_06677540.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Enterococcus faecium E1162] gi|293567501|ref|ZP_06678846.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Enterococcus faecium E1071] gi|294616566|ref|ZP_06696343.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Enterococcus faecium E1636] gi|294618840|ref|ZP_06698361.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Enterococcus faecium E1679] gi|68194486|gb|EAN08984.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Enterococcus faecium DO] gi|257814297|gb|EEV43055.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257827520|gb|EEV54146.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|257830353|gb|EEV56960.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] gi|260073663|gb|EEW61989.1| amino acid ABC transporter [Enterococcus faecium C68] gi|260077512|gb|EEW65230.1| amino acid ABC transporter [Enterococcus faecium TC 6] gi|289162227|gb|EFD10088.1| amino acid ABC transporter [Enterococcus faecium D344SRF] gi|291589744|gb|EFF21547.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Enterococcus faecium E1071] gi|291590576|gb|EFF22308.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Enterococcus faecium E1636] gi|291594915|gb|EFF26271.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Enterococcus faecium E1679] gi|291602567|gb|EFF32783.1| amino acid ABC transporter, permease protein [Enterococcus faecium E1039] gi|291604988|gb|EFF34456.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Enterococcus faecium E1162] Length = 213 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 123/211 (58%), Gaps = 5/211 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-IRIFFSDTIISLIMHFYVWIFRG 67 +I+ PQLL A+ TL + + + SL +G +A+ + + F + ++ YVW+ RG Sbjct: 4 LIEVMPQLLVGALT-TLKLFLFTLIGSLPLGIVLALGLSLHFKP--LRYLLQTYVWVMRG 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL IFYGLP IGIVFD F A +I+ LN++AY +EI R I SIP+GQ++A+ Sbjct: 61 TPLLLQLIFIFYGLPTIGIVFDRFEAALIAFILNYAAYFAEIFRGGIQSIPQGQYEAAQV 120 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 + L+ QT+ I++PQ + +E I+++K +S+ + + ++ + A +I Sbjct: 121 LQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYILGLGDVMR-AGKIAMERDA 179 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 L+ +A +YL LT I+ ++E + Sbjct: 180 TLLPLLGVAIIYLTLTGILTIVMKQVEGKLN 210 >gi|332717199|ref|YP_004444665.1| amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] gi|325063884|gb|ADY67574.1| amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 222 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 78/206 (37%), Positives = 115/206 (55%), Gaps = 3/206 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y F+ +ID P+LL A + T+ +A ++ +IG V R + L++ Sbjct: 1 MSYSLDFSAVIDRLPELLLACLA-TIGLAIAGMSLATVIGVLGVVARRSRFKLLRGLVIG 59 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 F V R TP LVQ+F IF+ LP IGI + V II+L LN AY EIIR + SIPK Sbjct: 60 F-VEAIRNTPFLVQIFFIFFALPQIGIKLNPTVTAIIALALNGGAYAIEIIRGGVDSIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A A+GL R Q RHIIL + L+S+FI + +TSV ++I E+ AQ Sbjct: 119 GQVEAGLALGLHRAQIFRHIILKPALRAVYPSLTSQFIMLTLTTSVCTSIAAYELTSVAQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSF 205 +I + T++ +Y + +YL+++S Sbjct: 179 QIEADTFRSFEVYFSITLLYLVISSL 204 >gi|167628827|ref|YP_001679326.1| glutamine abc transporter, permease protein [Heliobacterium modesticaldum Ice1] gi|167591567|gb|ABZ83315.1| glutamine abc transporter, permease protein [Heliobacterium modesticaldum Ice1] Length = 221 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 118/204 (57%), Gaps = 4/204 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++W I+ + L T+ + IS +I +IG FIA+ R+ ++ + Sbjct: 1 MDFKW--KIVQDYADLFLMGGWTTVKVTAISVMIGTVIGLFIALARLSHW-RLLRWVAAI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y + RGTPLLVQ+F++ G P IG + + +I+L++N AY++EI R+ I SI K Sbjct: 58 YTDVIRGTPLLVQIFIVHLGAPKLIGQSLPAMTSGLIALSVNSGAYVAEIFRAGIQSIDK 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +AS ++G++ Q +R +ILPQ PL +EFI++LK +S+ S I++PE+ + Sbjct: 118 GQMEASRSLGMSYGQAMRFVILPQAFRRVIPPLGNEFIAMLKDSSLVSVISLPELTMAGR 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 ++ +T + + +A +YL LT Sbjct: 178 TVLGSTARVWEAWLPVAAIYLTLT 201 >gi|148983846|ref|ZP_01817165.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP3-BS71] gi|147923993|gb|EDK75105.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP3-BS71] gi|301799546|emb|CBW32096.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae OXC141] Length = 521 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 126/223 (56%), Gaps = 11/223 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISLIMHFY 61 +++ QLL + +TL I+ + + LIIG I V R I+ ++ I++ Y Sbjct: 288 ENWQQLLRGS-SITLLISIVGTITGLIIGLAIGVFRTAPLSENKVIYGLQKLVGWILNVY 346 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R I+++ KG Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILAVDKG 406 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 407 QFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNT 466 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + + TYQ + +A +Y +LT I IE + TY+ Sbjct: 467 VATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRMDMDTYT 509 >gi|330821191|ref|YP_004350053.1| amino acid ABC transporter, permease protein [Burkholderia gladioli BSR3] gi|327373186|gb|AEA64541.1| amino acid ABC transporter, permease protein [Burkholderia gladioli BSR3] Length = 223 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 116/198 (58%), Gaps = 4/198 (2%) Query: 8 LIIDSFPQ---LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 L +DS Q LL + TL ++ ++ +S+ +G IA I F + +L++ Y+ + Sbjct: 9 LSLDSLRQIYPLLLQGLKWTLLLSLVAAPVSIALGMLIA-IGYSFHHRVANLVLIAYIDL 67 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FR P++V L +I+YGLP GI SF A++++L LN S Y EI R+ I S+P GQ +A Sbjct: 68 FRSFPVVVLLALIYYGLPFFGITLSSFAAVVLALALNNSGYYGEIFRAGIESVPHGQREA 127 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G R + I +I+LPQ + PL+S + + KSTS+AS +++PE+ ++++ Sbjct: 128 ARSLGFGRSREIAYIVLPQAVRNVLAPLASNTLELFKSTSIASLVSLPELLRSSRVAQEQ 187 Query: 185 TYQPLIIYCELAFVYLIL 202 TY P + +L+L Sbjct: 188 TYNPTPLMAAAVIFFLLL 205 >gi|11497848|ref|NP_069070.1| glutamine ABC transporter, permease protein (glnP) [Archaeoglobus fulgidus DSM 4304] gi|2650409|gb|AAB91000.1| glutamine ABC transporter, permease protein (glnP) [Archaeoglobus fulgidus DSM 4304] Length = 224 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 75/197 (38%), Positives = 118/197 (59%), Gaps = 2/197 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L I P L + A VTL + IS LIIG + R+ + + I YV + R Sbjct: 10 DLFIRILPDLAFGA-SVTLKLTLISIFFGLIIGTIAGLGRVS-KNPLPFAISTAYVEVIR 67 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+ ++++GLP IGI A II+L++ AYI+EI+R+ I SIP GQ +A+ Sbjct: 68 GTPLLVQILIVYFGLPAIGINLQPEPAGIIALSICSGAYIAEIVRAGIESIPIGQMEAAR 127 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+T Q +R++I PQ L +EFI++LK +S+ S I+I E+ + ++IV+TT+ Sbjct: 128 SLGMTYLQAMRYVIFPQAFRNILPALGNEFIALLKDSSLLSVISIVELTRVGRQIVNTTF 187 Query: 187 QPLIIYCELAFVYLILT 203 + +A YL++T Sbjct: 188 NAWTPFLGVALFYLMMT 204 >gi|314940259|ref|ZP_07847432.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|314941683|ref|ZP_07848562.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|314947673|ref|ZP_07851082.1| ABC transporter, permease protein [Enterococcus faecium TX0082] gi|314950660|ref|ZP_07853740.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|314992473|ref|ZP_07857894.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|314996867|ref|ZP_07861872.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|313589010|gb|EFR67855.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|313592933|gb|EFR71778.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|313597207|gb|EFR76052.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|313599455|gb|EFR78298.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|313640579|gb|EFS05159.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|313645914|gb|EFS10494.1| ABC transporter, permease protein [Enterococcus faecium TX0082] Length = 237 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 123/211 (58%), Gaps = 5/211 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-IRIFFSDTIISLIMHFYVWIFRG 67 +I+ PQLL A+ TL + + + SL +G +A+ + + F + ++ YVW+ RG Sbjct: 28 LIEVMPQLLVGALT-TLKLFLFTLIGSLPLGIVLALGLSLHFKP--LRYLLQTYVWVMRG 84 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL IFYGLP IGIVFD F A +I+ LN++AY +EI R I SIP+GQ++A+ Sbjct: 85 TPLLLQLIFIFYGLPTIGIVFDRFEAALIAFILNYAAYFAEIFRGGIQSIPQGQYEAAQV 144 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 + L+ QT+ I++PQ + +E I+++K +S+ + + ++ + A +I Sbjct: 145 LQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYILGLGDVMR-AGKIAMERDA 203 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 L+ +A +YL LT I+ ++E + Sbjct: 204 TLLPLLGVAIIYLTLTGILTIVMKQVEGKLN 234 >gi|16803780|ref|NP_465265.1| hypothetical protein lmo1740 [Listeria monocytogenes EGD-e] gi|47095666|ref|ZP_00233273.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 1/2a F6854] gi|224499540|ref|ZP_03667889.1| hypothetical protein LmonF1_07517 [Listeria monocytogenes Finland 1988] gi|224503335|ref|ZP_03671642.1| hypothetical protein LmonFR_12615 [Listeria monocytogenes FSL R2-561] gi|254829262|ref|ZP_05233949.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165] gi|254900755|ref|ZP_05260679.1| hypothetical protein LmonJ_13104 [Listeria monocytogenes J0161] gi|254938146|ref|ZP_05269843.1| amino acid ABC transporter [Listeria monocytogenes F6900] gi|16411194|emb|CAC99818.1| lmo1740 [Listeria monocytogenes EGD-e] gi|47015951|gb|EAL06877.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 1/2a F6854] gi|258601674|gb|EEW14999.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165] gi|258610760|gb|EEW23368.1| amino acid ABC transporter [Listeria monocytogenes F6900] Length = 213 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 125/212 (58%), Gaps = 7/212 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + I++ P LL A TL + ++ V S+ +G +AV I + I++ Y+WI R Sbjct: 2 DYIMEILPALLDGA-KTTLLVFAVTLVCSIPLGAVVAVGNIS-KIAPLKFILNIYIWIMR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL I+YGLP IG+VFD A+ I+ LN++AY +EI R +SI GQ++++ Sbjct: 60 GTPLLLQLIFIYYGLPIIGVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENGQYESAK 119 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--T 184 +GLT QT+R I+LPQ + + +E I+++K +S+ + I ++ + + +S Sbjct: 120 VLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDV 179 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 T PL++ +A +YL LT+ ++ ++E Sbjct: 180 TLIPLVL---VAAIYLALTAILTVLFKQLEKR 208 >gi|329766946|ref|ZP_08258474.1| hypothetical protein HMPREF0428_00171 [Gemella haemolysans M341] gi|328837671|gb|EGF87296.1| hypothetical protein HMPREF0428_00171 [Gemella haemolysans M341] Length = 214 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/218 (35%), Positives = 126/218 (57%), Gaps = 8/218 (3%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ P L+ A++ TL + + ++S+ +G IA I I F+ +++ ++ Y+WI RGT Sbjct: 4 LMEILPSLIKGALI-TLEVFFLVLILSIPLGVIIAFI-IRFNIKLLNYFINIYIWIMRGT 61 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QL I+Y LP +GI FD A II+ TLN++AY +EI R I SIPKGQ++A+ + Sbjct: 62 PLLLQLIFIYYVLPSVGIRFDRLPAAIIAFTLNYAAYFAEIFRGGIDSIPKGQYEAAKVL 121 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 T+ QTIR +ILPQ I + +E +S++K TS+ + I ++ A R + Sbjct: 122 KFTQFQTIRFVILPQVIKIVLPSVFNEIMSLVKDTSLVYALGISDLI-LASRTAANRDAS 180 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 L+ +YL+L II ++E Y+ D+ Sbjct: 181 LLPMFVAGAIYLLLIGIVTIISKRVE-----KRYNYDR 213 >gi|296271867|ref|YP_003654498.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter nitrofigilis DSM 7299] gi|296096042|gb|ADG91992.1| polar amino acid ABC transporter, inner membrane subunit [Arcobacter nitrofigilis DSM 7299] Length = 216 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/191 (38%), Positives = 117/191 (61%), Gaps = 3/191 (1%) Query: 33 VISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 ++S++IGF ++I S+T I+ I FY+ RGTPLLVQL ++FY LP+ GI Sbjct: 26 LLSILIGFIFSIILCLGRLSSNTFINFICRFYISAIRGTPLLVQLTIVFYFLPYWGINIP 85 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 S A II+L++N +A+ +EI+R +IP GQ + +++ G T Q + +I LPQ I Sbjct: 86 SIAAAIITLSMNTAAFQAEILRGGFQTIPHGQKETAWSYGYTPFQCLYYIELPQVIRKVL 145 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYII 209 L++E I I+K++++ STI + ++ + Q STTY+P+ + +YL+LTS I+ Sbjct: 146 PSLTNEIIDIIKNSALISTIAVIDLMRVTQVYSSTTYRPIEFFVSAGLLYLLLTSCISIL 205 Query: 210 QIKIESSVTQH 220 IES +T H Sbjct: 206 GRYIESRLTTH 216 >gi|262155888|ref|ZP_06029010.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE 91/1] gi|262030340|gb|EEY48982.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE 91/1] Length = 188 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 69/186 (37%), Positives = 113/186 (60%), Gaps = 8/186 (4%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG---IVFDSFVAI 94 + F+A IR+F ++ + Y+ FRGTPLLVQLF+++YGLP + + D+F A Sbjct: 1 MALFLANIRVF-KVPVLDPLSQLYISFFRGTPLLVQLFLLYYGLPQVFPLLVGLDAFSAA 59 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 +I LTL+F+AY++E IR++II I + Q +AS ++G+T Q +R IILPQ + L + Sbjct: 60 VIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSVGMTTSQAMRRIILPQATRVALPSLMN 119 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY----LILTSFCYIIQ 210 FI ++KSTS+A T+ + EI AQ S++++ + +A +Y L+LT + Sbjct: 120 YFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWVVVLVLTRLQSWAE 179 Query: 211 IKIESS 216 K+ + Sbjct: 180 QKLNKA 185 >gi|83942406|ref|ZP_00954867.1| amino acid ABC transproter, permease protein [Sulfitobacter sp. EE-36] gi|83953626|ref|ZP_00962347.1| amino acid ABC transproter, permease protein [Sulfitobacter sp. NAS-14.1] gi|83841571|gb|EAP80740.1| amino acid ABC transproter, permease protein [Sulfitobacter sp. NAS-14.1] gi|83846499|gb|EAP84375.1| amino acid ABC transproter, permease protein [Sulfitobacter sp. EE-36] Length = 224 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 67/196 (34%), Positives = 118/196 (60%), Gaps = 6/196 (3%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL +A + V +L++ +AV R+F ++ + + ++ FRGTPLLVQLF+ +YGLP Sbjct: 22 LTLFMAFVGMVCALVLASVLAVERVF-RVPVLDVFVRLFISFFRGTPLLVQLFLFYYGLP 80 Query: 83 HI----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 + G + D A I+ LTL+FSAY++E IR++I+ + + QW+A+ A+G+T+ Q +R Sbjct: 81 QVLSFLGKI-DGVTATIMGLTLHFSAYMAESIRAAILGVDRSQWEAAQAVGMTQGQMMRQ 139 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 IILPQ +A L + FI ++K TS+A T+ + E+ Q+ + ++ + +A + Sbjct: 140 IILPQASRVAAPTLVNYFIDMIKGTSLAFTLGVTELMGATQKEAAGSFLYFEAFLVVAAI 199 Query: 199 YLILTSFCYIIQIKIE 214 Y ++ Q +E Sbjct: 200 YWVMVETLAFAQRHLE 215 >gi|241890035|ref|ZP_04777333.1| inner membrane amino-acid ABC transporter permease protein YecS [Gemella haemolysans ATCC 10379] gi|241863657|gb|EER68041.1| inner membrane amino-acid ABC transporter permease protein YecS [Gemella haemolysans ATCC 10379] Length = 214 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 76/218 (34%), Positives = 126/218 (57%), Gaps = 8/218 (3%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I+ P L+ ++ TL + + V+S+ +G IA I + F+ +++ ++ Y+WI RGT Sbjct: 4 LIEILPSLINGGLI-TLEVFFLVLVLSIPLGVVIAFI-MRFNIKLLNYFINIYIWIMRGT 61 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QL I+Y LP +GI FD A II+ TLN++AY +EI R I SIPKGQ++A+ + Sbjct: 62 PLLLQLIFIYYVLPSVGIRFDRLPAAIIAFTLNYAAYFAEIFRGGIESIPKGQYEAAKVL 121 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 T+ QTIR++ILPQ I + +E +S++K TS+ + I ++ A R + Sbjct: 122 KFTQFQTIRYVILPQVIKIVLPSVFNEIMSLVKDTSLVYALGISDLI-LASRTAANRDAS 180 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 L+ +YLIL ++ ++E Y+ D+ Sbjct: 181 LLPMFVAGAIYLILIGIVTVVSKQVEKR-----YNYDR 213 >gi|239982244|ref|ZP_04704768.1| permease [Streptomyces albus J1074] Length = 315 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 75/219 (34%), Positives = 126/219 (57%), Gaps = 22/219 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + + TL + +S VI ++ G +AV+R+ + ++S I FY+W FRGTP+LV Sbjct: 68 FNDRILSGVRETLILTVLSMVIGVVGGVLLAVMRLS-KNPVVSSIAWFYIWFFRGTPVLV 126 Query: 73 QLFVIFYGLPHIGIVFD-----------------SFVAIIISLTLNFSAYISEIIRSSII 115 QLFV F ++G VF+ F+ ++ L LN +AY++EI R+ ++ Sbjct: 127 QLFVWF----NLGFVFEYMNLGPFYKDEWSDFMTPFLTALLGLGLNEAAYMAEICRAGLL 182 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ +GQ +A++A+G+++ +T+R I+LPQ + P +E I++LK+TS+ + + E+F Sbjct: 183 SVDEGQTEAAHALGMSQGKTLRRIVLPQAMRVIVPPTGNEVINMLKTTSLVAAVQYYELF 242 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + AQ I T+ + A YLILTS I Q IE Sbjct: 243 KHAQDIGMTSGATVEALFLAATWYLILTSILSIGQYYIE 281 >gi|298249929|ref|ZP_06973733.1| polar amino acid ABC transporter, inner membrane subunit [Ktedonobacter racemifer DSM 44963] gi|297547933|gb|EFH81800.1| polar amino acid ABC transporter, inner membrane subunit [Ktedonobacter racemifer DSM 44963] Length = 251 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 79/227 (34%), Positives = 131/227 (57%), Gaps = 7/227 (3%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 WF L D L AA +V L ++ ++ + +I+G F+A++++ + I Y+W Sbjct: 8 WFYLFQDPNLYFLKAAWLV-LWVSVVAQTLGVILGLFLALMQMS-KWPALQWIARAYLWF 65 Query: 65 FRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FRG+PLLVQ+ +++ GLP I G++ F I+++ +LN AY+SEIIR++I ++ GQ Sbjct: 66 FRGSPLLVQVLLLWTGLPKIVPGLLLPDFACILVAFSLNEGAYMSEIIRAAIGAVDPGQM 125 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS A+G+ +R IILPQ PL +EF ++LK+TS+A+ I + E+ TA+ Sbjct: 126 EASKALGMRYWVAMRRIILPQAARVVIPPLGNEFNNMLKTTSIATVIGMLELTGTARTFG 185 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT---QHTYSVDK 226 + T+ + YLILT+ +IQ IE + + SV+K Sbjct: 186 APTFNIFELLIVATVYYLILTTIWDVIQRWIERRLDPDRKPAISVNK 232 >gi|271499665|ref|YP_003332690.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270343220|gb|ACZ75985.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 281 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 128/222 (57%), Gaps = 6/222 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +L D F Q ++V+TL IS + +++ A R+ S I FYV +F Sbjct: 62 MHLSPDGFIQGAVLSVVITL----ISMLFCILLAVIAAAGRLS-SSAIAFGCATFYVSLF 116 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQ+ +I+ LP +GIV +F + II+L+LN+ AY++E IRS ++S+P+GQ +A+ Sbjct: 117 RGTPLLVQVLIIYLALPQVGIVMSAFTSGIIALSLNYGAYLAETIRSGVLSVPRGQKEAA 176 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL+R H++ PQ + P S+FIS++K +S+ S + + E+ AQ +T Sbjct: 177 MALGLSRWVITTHVVAPQALRIIIPPAGSQFISMIKDSSLVSLMGLWELNFLAQSYGRST 236 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ-HTYSVDK 226 Y + + A +Y +L+ ++Q ++E + + + DK Sbjct: 237 YHYMEMLTTAAVIYWLLSIGLELLQGRLERRFGRGYEHHDDK 278 >gi|229551216|ref|ZP_04439941.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|229315379|gb|EEN81352.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] Length = 566 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 120/210 (57%), Gaps = 10/210 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---------DTII 54 WF I+ + +L +TL I+ + ++ IIG + +IR +I Sbjct: 317 NWFMAIMKQYGPMLLRGTGMTLLISLVGTLVGFIIGLLVGIIRTTPKPKKLGQRGLRAVI 376 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + ++ Y+ +FRGTP++VQ V++YG + D A ++ +++N AYISEIIR Sbjct: 377 NWLLSVYIEVFRGTPMIVQAAVLYYGAAQAWHLNMDRTTAALLIVSINTGAYISEIIRGG 436 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 IIS+ +GQ++A+ A+G+T QT+ +ILPQ + S +++EFI +K TSV S I++ E Sbjct: 437 IISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFIVNIKDTSVLSVISVSE 496 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +F + + I ++Q Y ++ +YLI+T Sbjct: 497 LFFSGETIAGQSFQFFHTYLIVSGIYLIMT 526 >gi|182418791|ref|ZP_02950058.1| L-cystine permease protein TcyB [Clostridium butyricum 5521] gi|237667901|ref|ZP_04527885.1| L-cystine transport system permease protein TcyB [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377346|gb|EDT74906.1| L-cystine permease protein TcyB [Clostridium butyricum 5521] gi|237656249|gb|EEP53805.1| L-cystine transport system permease protein TcyB [Clostridium butyricum E4 str. BoNT E BL5262] Length = 213 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/209 (36%), Positives = 120/209 (57%), Gaps = 3/209 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 N ++ PQ+L + VTL I ++ V+S+ +G + ++R S I+ I YV I Sbjct: 1 MNYLLGLMPQVL-EGLKVTLEIFILTLVLSIPLGIIVGLMRTSKS-IILRKISGAYVLIM 58 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLL+Q+ VIF+GLP +GI FD F + II+ TLN+ AY EI R+ I SI +GQ +A+ Sbjct: 59 RGTPLLLQIIVIFFGLPLVGITFDRFPSAIIAFTLNYGAYFGEIFRAGIQSIDEGQIEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +G+T K T IILPQ T P+++E +++K TS+ + + E+ + +I S Sbjct: 119 EVLGITPKDTFFRIILPQAFKTVLPPVANEITTLVKDTSLVYIVGMDELLKVG-KIASNR 177 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIE 214 L+ + VYLI+ + K+E Sbjct: 178 DVSLLPLLVVGAVYLIVIGILSKLLKKLE 206 >gi|257867389|ref|ZP_05647042.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257873720|ref|ZP_05653373.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257801445|gb|EEV30375.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257807884|gb|EEV36706.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] Length = 226 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/213 (36%), Positives = 125/213 (58%), Gaps = 9/213 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ +S P LL + + T+ IA +SF+ ++G + + + + II + Y+ RG Sbjct: 10 LMWESLPYLL-SGLSYTVGIAVVSFLGGNVLGIMLTFLGML-ENPIIRGFVRGYLSFLRG 67 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 P LV LF++++GLP+ + A II TL SA+I EI R SI + +GQ+DA+YA Sbjct: 68 VPALVLLFLLYFGLPY---QLSALSAAIICFTLTSSAFIGEIYRGSIAGVDRGQFDAAYA 124 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL+ +T+R IILPQ S LS+ + +LK TS+A+ ITIP+IFQ A+ + T+ Sbjct: 125 LGLSFTKTMRLIILPQAFRISVPALSNVAMDLLKGTSLAAMITIPDIFQKAKIVGGRTFD 184 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + +Y +A +Y +L C +I+ + + QH Sbjct: 185 YMSMYVLVAIIYWLL---CILIEAG-QKRLEQH 213 >gi|116496256|ref|YP_807990.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei ATCC 334] gi|191639782|ref|YP_001988948.1| Amino acid ABC transporter, amino acid-binding protein/permease protein [Lactobacillus casei BL23] gi|227532749|ref|ZP_03962798.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|116106406|gb|ABJ71548.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Lactobacillus casei ATCC 334] gi|190714084|emb|CAQ68090.1| Amino acid ABC transporter, amino acid-binding protein/permease protein [Lactobacillus casei BL23] gi|227189583|gb|EEI69650.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 532 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 120/210 (57%), Gaps = 10/210 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---------DTII 54 WF I+ + +L +TL I+ + ++ IIG + +IR +I Sbjct: 283 NWFIAIMKQYGPMLLRGTGMTLLISLVGTIVGFIIGLLVGIIRTTPKPKKLGQRGLRAVI 342 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + ++ Y+ +FRGTP++VQ V++YG + D A ++ +++N AYISEIIR Sbjct: 343 NWLLSLYIEVFRGTPMIVQAAVLYYGAAQAWHLNMDRTTAALLIVSINTGAYISEIIRGG 402 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 IIS+ +GQ++A+ A+G+T QT+ +ILPQ + S +++EFI +K TSV S I++ E Sbjct: 403 IISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFIVNIKDTSVLSVISVSE 462 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +F + + I ++Q Y ++ +YLI+T Sbjct: 463 LFFSGETIAGQSFQFFHTYLIVSAIYLIMT 492 >gi|121609959|ref|YP_997766.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121554599|gb|ABM58748.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 221 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/206 (37%), Positives = 130/206 (63%), Gaps = 1/206 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ P+LL+ AIV T+ I S V+ I G + + R+ S + I YV RGT Sbjct: 8 VLEGLPELLHGAIV-TVKITATSLVLGCIFGLLVGMGRLDRSKRLRYGICTAYVTFIRGT 66 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLLVQLF++F+GLP I+ +F+ ++ L + AY+SEI+R +I SI KGQ +A+ ++ Sbjct: 67 PLLVQLFLLFFGLPQFDILLPAFLCGVLGLGIYSGAYVSEIVRGAIQSIDKGQMEAARSL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G++ + +R IILPQ + PL +EFI+++K++++ S +TI ++ Q+I+S +Y+ Sbjct: 127 GMSSGKAMRTIILPQAVVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISVSYRS 186 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIE 214 L +Y +A VYL+LT+ + K+E Sbjct: 187 LEVYLAVALVYLVLTTLTGMALQKVE 212 >gi|258541026|ref|YP_003175525.1| amino acid ABC transporter substrate-binding protein [Lactobacillus rhamnosus Lc 705] gi|257152702|emb|CAR91674.1| ABC transporter, amino acid-binding protein [Lactobacillus rhamnosus Lc 705] gi|259651105|dbj|BAI43267.1| amino acid ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 535 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 120/210 (57%), Gaps = 10/210 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---------DTII 54 WF I+ + +L +TL I+ + ++ IIG + +IR +I Sbjct: 286 NWFMAIMKQYGPMLLRGTGMTLLISLVGTLVGFIIGLLVGIIRTTPKPKKLGQRGLRAVI 345 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + ++ Y+ +FRGTP++VQ V++YG + D A ++ +++N AYISEIIR Sbjct: 346 NWLLSVYIEVFRGTPMIVQAAVLYYGAAQAWHLNMDRTTAALLIVSINTGAYISEIIRGG 405 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 IIS+ +GQ++A+ A+G+T QT+ +ILPQ + S +++EFI +K TSV S I++ E Sbjct: 406 IISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFIVNIKDTSVLSVISVSE 465 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +F + + I ++Q Y ++ +YLI+T Sbjct: 466 LFFSGETIAGQSFQFFHTYLIVSGIYLIMT 495 >gi|284802184|ref|YP_003414049.1| hypothetical protein LM5578_1940 [Listeria monocytogenes 08-5578] gi|284995326|ref|YP_003417094.1| hypothetical protein LM5923_1891 [Listeria monocytogenes 08-5923] gi|284057746|gb|ADB68687.1| hypothetical protein LM5578_1940 [Listeria monocytogenes 08-5578] gi|284060793|gb|ADB71732.1| hypothetical protein LM5923_1891 [Listeria monocytogenes 08-5923] Length = 221 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/213 (34%), Positives = 125/213 (58%), Gaps = 7/213 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + I++ P LL A TL + ++ V S+ +G +AV I + I++ Y+WI Sbjct: 9 MDYIMEILPALLDGA-KTTLLVFVVTLVCSIPLGAVVAVGNIS-KIAPLKFILNIYIWIM 66 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLL+QL I+YGLP IG+VFD A+ I+ LN++AY +EI R +SI GQ++++ Sbjct: 67 RGTPLLLQLIFIYYGLPIIGVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENGQYESA 126 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS-- 183 +GLT QT+R I+LPQ + + +E I+++K +S+ + I ++ + + +S Sbjct: 127 KVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKIAMSRD 186 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 T PL++ +A +YL LT+ ++ ++E Sbjct: 187 VTLIPLVL---VAAIYLALTAILTVLFKQLEKR 216 >gi|312865954|ref|ZP_07726175.1| lysine-arginine-ornithine-binding periplasmic protein [Streptococcus downei F0415] gi|311098358|gb|EFQ56581.1| lysine-arginine-ornithine-binding periplasmic protein [Streptococcus downei F0415] Length = 731 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 126/214 (58%), Gaps = 9/214 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 LI +++ QLL + +T+ + +SF I+++IG ++ + + I+ I +V + RG Sbjct: 516 LIQNNYKQLL-QGLWITVALTLLSFAIAMVIGIIFGMMAVA-PNKILQGIAKVFVDVVRG 573 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ I++G+P++ + FVA I+L+LN +AYI+EI+R I ++PKG Sbjct: 574 IPLMIVAAFIYWGIPNLIESITGHQSPINDFVAATIALSLNAAAYIAEIVRGGIEAVPKG 633 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G+ +T+R +ILPQ + ++F+ LK T++ S I + E+FQT + Sbjct: 634 QMEASRSLGIPYGKTMRKVILPQAVRVMLPNFINQFVISLKDTTIVSAIGLVELFQTGKI 693 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I++ YQ +Y LA +YL++ + + ++E Sbjct: 694 IIARNYQSFRMYAILAIIYLVIITLLTRLAKRLE 727 >gi|199597698|ref|ZP_03211126.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] gi|258509843|ref|YP_003172594.1| ABC transporter amino acid-binding protein [Lactobacillus rhamnosus GG] gi|199591505|gb|EDY99583.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] gi|257149770|emb|CAR88743.1| ABC transporter, amino acid-binding protein [Lactobacillus rhamnosus GG] Length = 532 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 120/210 (57%), Gaps = 10/210 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---------DTII 54 WF I+ + +L +TL I+ + ++ IIG + +IR +I Sbjct: 283 NWFMAIMKQYGPMLLRGTGMTLLISLVGTLVGFIIGLLVGIIRTTPKPKKLGQRGLRAVI 342 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + ++ Y+ +FRGTP++VQ V++YG + D A ++ +++N AYISEIIR Sbjct: 343 NWLLSVYIEVFRGTPMIVQAAVLYYGAAQAWHLNMDRTTAALLIVSINTGAYISEIIRGG 402 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 IIS+ +GQ++A+ A+G+T QT+ +ILPQ + S +++EFI +K TSV S I++ E Sbjct: 403 IISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFIVNIKDTSVLSVISVSE 462 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +F + + I ++Q Y ++ +YLI+T Sbjct: 463 LFFSGETIAGQSFQFFHTYLIVSGIYLIMT 492 >gi|227879036|ref|ZP_03996929.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256844250|ref|ZP_05549736.1| ABC amino acid transporter permease [Lactobacillus crispatus 125-2-CHN] gi|256849349|ref|ZP_05554782.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-1A-US] gi|262047629|ref|ZP_06020583.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-3A-US] gi|227861370|gb|EEJ68996.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256613328|gb|EEU18531.1| ABC amino acid transporter permease [Lactobacillus crispatus 125-2-CHN] gi|256714125|gb|EEU29113.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-1A-US] gi|260572029|gb|EEX28595.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-3A-US] Length = 537 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 120/212 (56%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT--------- 52 K W + ++ + I +TL +A + ++ IG + +IR + T Sbjct: 287 KENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIIRTIPTPTTRGKRWTLN 346 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ ++ YV IFRGTP++VQ VI+YG+ + + VA +I +++N AY++E+IR Sbjct: 347 VVKWLLSVYVEIFRGTPMMVQAAVIYYGIAQFWHLNLNRTVAALIIVSINTGAYLAEVIR 406 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 IIS P+GQ++A+ A+G+T Q + HIILPQ I +++EFI +K TSV S I++ Sbjct: 407 GGIISTPEGQFEAASALGMTHNQRMWHIILPQAIRNCLPSITNEFIVNIKDTSVLSIISV 466 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F I S +++ Y ++ +YLILT Sbjct: 467 SELFFVGTTIASQSFKFFPTYLMISAIYLILT 498 >gi|254471270|ref|ZP_05084672.1| amino acid ABC transporter, permease protein [Pseudovibrio sp. JE062] gi|211959416|gb|EEA94614.1| amino acid ABC transporter, permease protein [Pseudovibrio sp. JE062] Length = 319 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 71/210 (33%), Positives = 125/210 (59%), Gaps = 1/210 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F II+ P LLY + TL ++ S + + I+ F A++R+ S + I FYV F Sbjct: 101 FPFIIERLPILLYKGLFYTLFVSFASIIFASILAFVGALMRLSNSGPAYA-ISTFYVSFF 159 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLL+Q+++I+ GLP +GI D+ + I++L+L++ AY++EI R+ I ++P+ Q +A+ Sbjct: 160 RGTPLLLQVYLIYLGLPQLGITLDAIPSGILALSLSYGAYMTEIFRAGIQAVPREQSEAA 219 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL QT+ ++LPQ I P + FIS+LK +S+ S + I E+ A+ + + Sbjct: 220 AALGLQPWQTMWKVVLPQAIRIIIPPTGNNFISMLKDSSLVSAMGIMELMYLARTLGRSE 279 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIES 215 ++ + A +Y ++ +IQ ++E Sbjct: 280 FKHFEMLISAALIYWAVSFVFEMIQARLEK 309 >gi|307702517|ref|ZP_07639471.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] gi|307623929|gb|EFO02912.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] Length = 521 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 74/224 (33%), Positives = 129/224 (57%), Gaps = 13/224 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISLIMHFY 61 +++ QLL A +TL I+ I + L+IG I V R ++ ++ I++ Y Sbjct: 287 ENWQQLLRGA-GITLLISIIGTITGLLIGLAIGVFRTAPLSENKAMYALQKLVGWILNVY 345 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R I+++ KG Sbjct: 346 IEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILAVDKG 405 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 406 QFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNT 465 Query: 181 IVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQHTYS 223 + + TYQ + +A +Y +LT + I++ IE + TY+ Sbjct: 466 VATQTYQYFQTFTIIAVIYFVLTFTVTRILRF-IERRMDMDTYT 508 >gi|217964113|ref|YP_002349791.1| amino acid ABC transporter permease [Listeria monocytogenes HCC23] gi|254832443|ref|ZP_05237098.1| hypothetical protein Lmon1_13894 [Listeria monocytogenes 10403S] gi|290893397|ref|ZP_06556382.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071] gi|217333383|gb|ACK39177.1| amino acid ABC transporter, permease protein [Listeria monocytogenes HCC23] gi|290557048|gb|EFD90577.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071] gi|307571320|emb|CAR84499.1| amino acid ABC transporter, permease protein [Listeria monocytogenes L99] Length = 213 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/210 (34%), Positives = 124/210 (59%), Gaps = 7/210 (3%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ P LL A TL + ++ V S+ +G +AV I + I++ Y+WI RGT Sbjct: 4 IMEILPALLDGA-KTTLLVFVVTLVCSIPLGAVVAVGNIS-KIAPLKFILNIYIWIMRGT 61 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QL I+YGLP IG+VFD A+ I+ LN++AY +EI R +SI GQ++++ + Sbjct: 62 PLLLQLIFIYYGLPIIGVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVL 121 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTY 186 GLT QT+R I+LPQ + + +E I+++K +S+ + I ++ + + +S T Sbjct: 122 GLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTL 181 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESS 216 PL++ +A +YL LT+ ++ ++E Sbjct: 182 IPLVL---VAAIYLALTAILTVLFKQLEKR 208 >gi|315612520|ref|ZP_07887433.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] gi|322374942|ref|ZP_08049456.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus sp. C300] gi|315315501|gb|EFU63540.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] gi|321280442|gb|EFX57481.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus sp. C300] Length = 521 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 74/224 (33%), Positives = 129/224 (57%), Gaps = 13/224 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISLIMHFY 61 +++ QLL A +TL I+ I + L+IG I V R ++ ++ I++ Y Sbjct: 287 ENWQQLLRGA-GITLLISIIGTITGLLIGLAIGVFRTAPLSENKAMYALQKLVGWILNVY 345 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R I+++ KG Sbjct: 346 IEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILAVDKG 405 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 406 QFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNT 465 Query: 181 IVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQHTYS 223 + + TYQ + +A +Y +LT + I++ IE + TY+ Sbjct: 466 VATQTYQYFQTFTIIAVIYFVLTFTVTRILRF-IERRMDMDTYT 508 >gi|257876302|ref|ZP_05655955.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|257810468|gb|EEV39288.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] Length = 214 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 127/212 (59%), Gaps = 3/212 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F +++ PQL+ + +T+ + ++ + S+ +G +A + + I+ LI+ YVW+ Sbjct: 2 FEYLVNVMPQLI-SGTGITVKLFALTLIGSIPLGILLAFV-LASRLRILKLIVQVYVWLM 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLL+QL +FYGLP +GIVFD F A +I+ +N++AY +EI R I SIP GQ++A+ Sbjct: 60 RGTPLLLQLIFVFYGLPILGIVFDRFEAALIAFIINYAAYFAEIFRGGIQSIPAGQYEAA 119 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 + L+ QTI+ II+PQ + + + +E I+++K TS+ + + ++ + +I Sbjct: 120 KVLRLSPIQTIQKIIIPQVVKITLPSVGNEVINLVKDTSLVYILGLSDVMRIG-KIAMER 178 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 L+ + +YL++T ++ +IE+ + Sbjct: 179 DSTLLPLVGVGLIYLVMTGVFTLLLKQIETKL 210 >gi|322373066|ref|ZP_08047602.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus sp. C150] gi|321278108|gb|EFX55177.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus sp. C150] Length = 213 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 74/211 (35%), Positives = 126/211 (59%), Gaps = 9/211 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRG 67 +++ P LL A VVTL + I V+S+ +G +A +++I F ++ ++ YVWI RG Sbjct: 4 VLEVLPALLNGA-VVTLQVFFIVIVLSIPLGIVLAFLMQIKFKP--LNWLLTLYVWIMRG 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL ++Y LP +GIVFD A II+ TLN++AY +EI R I++IPKGQ++A+ Sbjct: 61 TPLLLQLIFVYYVLPSVGIVFDRLPAAIIAFTLNYAAYFAEIFRGGILAIPKGQYEAAKM 120 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TT 185 + L+ QTIR++ILPQ + + +E I+++K +S+ + + ++ ++ + T Sbjct: 121 LKLSPFQTIRYVILPQVVKIVLPSIFNEIINLVKDSSLVYVLGVGDLLLESRTAANRDAT 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 P+ + +YLIL + +IE Sbjct: 181 LAPMFVAGA---IYLILVGVVTVASKRIEKK 208 >gi|239630711|ref|ZP_04673742.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067862|ref|YP_003789885.1| amino acid ABC transporter/signal transduction system periplasmic protein [Lactobacillus casei str. Zhang] gi|239526994|gb|EEQ65995.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300440269|gb|ADK20035.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus casei str. Zhang] gi|327383896|gb|AEA55372.1| Amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus casei LC2W] gi|327387077|gb|AEA58551.1| Amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus casei BD-II] Length = 535 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 120/210 (57%), Gaps = 10/210 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---------DTII 54 WF I+ + +L +TL I+ + ++ IIG + +IR +I Sbjct: 286 NWFIAIMKQYGPMLLRGTGMTLLISLVGTIVGFIIGLLVGIIRTTPKPKKLGQRGLRAVI 345 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + ++ Y+ +FRGTP++VQ V++YG + D A ++ +++N AYISEIIR Sbjct: 346 NWLLSLYIEVFRGTPMIVQAAVLYYGAAQAWHLNMDRTTAALLIVSINTGAYISEIIRGG 405 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 IIS+ +GQ++A+ A+G+T QT+ +ILPQ + S +++EFI +K TSV S I++ E Sbjct: 406 IISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFIVNIKDTSVLSVISVSE 465 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +F + + I ++Q Y ++ +YLI+T Sbjct: 466 LFFSGETIAGQSFQFFHTYLIVSAIYLIMT 495 >gi|161506724|ref|YP_001576674.1| amino acid ABC transporter permease protein [Lactobacillus helveticus DPC 4571] gi|160347713|gb|ABX26387.1| amino acid ABC transporter permease protein [Lactobacillus helveticus DPC 4571] Length = 537 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 120/212 (56%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT--------- 52 K W + ++ + I +TL +A + V+ IG I ++R + T Sbjct: 287 KENWLVTTWKQYGGMIMSGIGMTLLLALVGTVVGFFIGLLIGIVRTIPTPTTRGKRWALN 346 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ ++ YV IFRGTP++VQ VI+YG+ + + +A +I +++N AY++E+IR Sbjct: 347 VVKWLLSVYVEIFRGTPMMVQAAVIYYGIAQFWHLNLNRTIAALIIVSINTGAYLAEVIR 406 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 IIS P+GQ++A+ A+G+T Q + HIILPQ I +++EFI +K TSV S I++ Sbjct: 407 GGIISTPEGQFEAASALGMTHSQKMWHIILPQAIKNCLPSITNEFIVNIKDTSVLSIISV 466 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F I S +++ Y ++ +YLILT Sbjct: 467 SELFFVGTTIASQSFKFFPTYLMISAIYLILT 498 >gi|320103283|ref|YP_004178874.1| polar amino acid ABC transporter inner membrane subunit [Isosphaera pallida ATCC 43644] gi|319750565|gb|ADV62325.1| polar amino acid ABC transporter, inner membrane subunit [Isosphaera pallida ATCC 43644] Length = 577 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 105/158 (66%), Gaps = 1/158 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L AA +T+ +AC + ++++ G IA+ R++ + ++ YV + RGTPL++QLF Sbjct: 347 LIAAAGMTIFLACAAMPLAILAGMVIALGRVY-GPKPLDWLLRGYVEVIRGTPLMLQLFF 405 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +FY +P +G+ + A ++ L +N+SAY +EI R+ + +IP+GQ +A+ A+G+T Q I Sbjct: 406 LFYLMPELGVYLPAIAAGVLGLAINYSAYEAEIYRAGLQAIPRGQLEAARALGMTLFQAI 465 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 R ++LPQT+ P++++FI++ K TSV S IT+ E+ Sbjct: 466 RRVVLPQTVRIVVPPVTNDFIAMFKDTSVCSVITLVEL 503 >gi|328464919|gb|EGF36207.1| amino acid ABC transporter permease protein [Lactobacillus helveticus MTCC 5463] Length = 537 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 120/212 (56%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT--------- 52 K W + ++ + I +TL +A + V+ IG + ++R + T Sbjct: 287 KENWLVTTWKQYGGMIMSGIGMTLLLALVGTVVGFFIGLLVGIVRTIPTPTTRGKRWALN 346 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ ++ YV IFRGTP++VQ VI+YG+ + + +A +I +++N AY++E+IR Sbjct: 347 VVKWLLSVYVEIFRGTPMMVQAAVIYYGIAQFWHLNLNRTIAALIIVSINTGAYLAEVIR 406 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 IIS P+GQ++A+ A+G+T Q + HIILPQ I +++EFI +K TSV S I++ Sbjct: 407 GGIISTPEGQFEAASALGMTHNQKMWHIILPQAIKNCLPSITNEFIVNIKDTSVLSIISV 466 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F I S +++ Y ++ +YLILT Sbjct: 467 SELFFVGTTIASQSFKFFPTYLMISAIYLILT 498 >gi|313892004|ref|ZP_07825605.1| glutamine ABC transporter, permease protein GlnP [Dialister microaerophilus UPII 345-E] gi|329121000|ref|ZP_08249631.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Dialister micraerophilus DSM 19965] gi|313119647|gb|EFR42838.1| glutamine ABC transporter, permease protein GlnP [Dialister microaerophilus UPII 345-E] gi|327471162|gb|EGF16616.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Dialister micraerophilus DSM 19965] Length = 213 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 117/199 (58%), Gaps = 3/199 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F LI +FP LL A VT+ I +S V +I I I ++ +I Y Sbjct: 3 FELIQQAFPLLLLGA-GVTIEITAVS-VAIGLIIGLIIGILRIGQIRVLRIIATIYADCI 60 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQ+F+I++ LP I G D F+A + + +N AY+SEIIR+ I SI GQ +A Sbjct: 61 RGTPLLVQIFLIYFALPMISGHRVDPFLAAVTACGINSGAYVSEIIRAGIQSIDIGQMEA 120 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++GLT QT+ HIILPQ + PL +EFI++LK +S+ S I E+ + Q I++ Sbjct: 121 GRSLGLTWWQTMYHIILPQALRNILPPLGNEFIAMLKDSSLVSVIGFEELTRRGQLIIAQ 180 Query: 185 TYQPLIIYCELAFVYLILT 203 TY I+ +AF+YL++T Sbjct: 181 TYGSFEIWLTVAFLYLVMT 199 >gi|260102128|ref|ZP_05752365.1| His/Glu/Gln/Arg/opine amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus helveticus DSM 20075] gi|260084018|gb|EEW68138.1| His/Glu/Gln/Arg/opine amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus helveticus DSM 20075] Length = 546 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 120/212 (56%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT--------- 52 K W + ++ + I +TL +A + V+ IG + ++R + T Sbjct: 296 KENWLVTTWKQYGGMIMSGIGMTLLLALVGTVVGFFIGLLVGIVRTIPTPTTRGKRWALN 355 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ ++ YV IFRGTP++VQ VI+YG+ + + +A +I +++N AY++E+IR Sbjct: 356 VVKWLLSVYVEIFRGTPMMVQAAVIYYGIAQFWHLNLNRTIAALIIVSINTGAYLAEVIR 415 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 IIS P+GQ++A+ A+G+T Q + HIILPQ I +++EFI +K TSV S I++ Sbjct: 416 GGIISTPEGQFEAASALGMTHNQKMWHIILPQAIKNCLPSITNEFIVNIKDTSVLSIISV 475 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F I S +++ Y ++ +YLILT Sbjct: 476 SELFFVGTTIASQSFKFFPTYLMISAIYLILT 507 >gi|257866711|ref|ZP_05646364.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257872772|ref|ZP_05652425.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257800669|gb|EEV29697.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257806936|gb|EEV35758.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] Length = 214 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 127/212 (59%), Gaps = 3/212 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F +++ PQL+ + +T+ + ++ + S+ +G +A + + I+ LI+ YVW+ Sbjct: 2 FEYLVNVMPQLI-SGTGITVKLFALTLIGSIPLGILLAFV-LASRLRILKLIVQVYVWLM 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLL+QL +FYGLP +GIVFD F A +I+ +N++AY +EI R I SIP GQ++A+ Sbjct: 60 RGTPLLLQLIFVFYGLPILGIVFDRFEAALIAFIINYAAYFTEIFRGGIQSIPAGQYEAA 119 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 + L+ QTI+ II+PQ + + + +E I+++K TS+ + + ++ + +I Sbjct: 120 KVLRLSPIQTIQKIIIPQVVKITLPSVGNEVINLVKDTSLVYILGLSDVMRIG-KIAMER 178 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 L+ + +YL++T ++ +IE+ + Sbjct: 179 DSTLLPLVGVGLIYLVMTGVFTLLLKQIETKL 210 >gi|116493034|ref|YP_804769.1| ABC-type amino acid transport system, permease component [Pediococcus pentosaceus ATCC 25745] gi|116103184|gb|ABJ68327.1| amino acid ABC transporter membrane protein, PAAT family [Pediococcus pentosaceus ATCC 25745] Length = 216 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 119/209 (56%), Gaps = 3/209 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N I + P LL A +TL + C + V SLI+G F+A + + I+ YVW+ R Sbjct: 5 NYISEIIPSLLSGA-SMTLQVFCWTIVGSLILGVFLA-LGLVSKFKPFQAIISAYVWLMR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL IFYGLP +GIVF + A +++ LN++AY +EI R + S+ KGQ++A Sbjct: 63 GTPLLLQLIFIFYGLPTVGIVFPRYEAALLAFILNYAAYFAEIFRGGLQSVDKGQYEAGR 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 + +T QT + +ILPQ + +E I+++K +S+ I I ++ + A + + Sbjct: 123 VLQMTYWQTTKKVILPQVAKIVLPSIGNEVINLVKDSSLVYVIGIGDLLR-AGNVAAARD 181 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIES 215 L+ + + +YLILT C + K+E Sbjct: 182 VTLVPFILVGIMYLILTGICTFLLRKVEK 210 >gi|293381104|ref|ZP_06627121.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] gi|290922316|gb|EFD99301.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] Length = 526 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 120/212 (56%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT--------- 52 K W + ++ + I +TL +A + ++ IG + +IR + T Sbjct: 276 KENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIIRTIPTPTTRGKRWTLN 335 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ ++ YV IFRGTP++VQ VI+YG+ + + VA +I +++N AY++E+IR Sbjct: 336 VVKWLLSVYVEIFRGTPMMVQAAVIYYGIAQFWHLNLNRTVAALIIVSINTGAYLAEVIR 395 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 IIS P+GQ++A+ A+G+T Q + HIILPQ I +++EFI +K TSV S I++ Sbjct: 396 GGIISTPEGQFEAASALGMTHNQRMWHIILPQAIRNCLPSITNEFIVNIKDTSVLSIISV 455 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F I S +++ Y ++ +YLILT Sbjct: 456 SELFFVGTTIASQSFKFFPTYLMISAIYLILT 487 >gi|172056714|ref|YP_001813174.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sibiricum 255-15] gi|171989235|gb|ACB60157.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sibiricum 255-15] Length = 215 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 126/201 (62%), Gaps = 13/201 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGTPLLVQLFV 76 AI TL + + V +L +G +AV+R D+ ++S YV FRGTPLL+Q+ + Sbjct: 17 AIGTTLLASGFAIVFALFLGLILAVMR----DSRFAVLSGFARLYVSFFRGTPLLLQILI 72 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ GL + + F A+ L+L+FSAYISE R++I S+ +GQW+A+ ++G+ R++T Sbjct: 73 LYNGL--VVLQLTGFQALAFGLSLHFSAYISESFRAAISSVDRGQWEAADSLGIPRRKTF 130 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY--QPLIIYCE 194 + +ILPQ ++ + PLS+ I I+KSTS+ + + + E+ + +I +TTY PL+++ Sbjct: 131 KDVILPQALSRAIPPLSNSVIDIIKSTSLGTIVAVEELTYVSDQISATTYLVMPLLLFS- 189 Query: 195 LAFVYLILTSFCYIIQIKIES 215 A +Y I+++ +Q ++E+ Sbjct: 190 -AAIYWIMSTLIQGVQHRLEA 209 >gi|157363726|ref|YP_001470493.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga lettingae TMO] gi|157314330|gb|ABV33429.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga lettingae TMO] Length = 223 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 77/212 (36%), Positives = 120/212 (56%), Gaps = 2/212 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + + I S P+LL +V TL + + + I+G + V RI+ II I ++ + Sbjct: 4 WEIAIFSLPKLL-NGLVTTLYMTLFAAITGFIMGIILCVGRIY-GRKIIRFICAGFIELI 61 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTP+LVQLF+++YGLP GI +A +I +N SAY +E IR +I SI GQ A+ Sbjct: 62 RGTPMLVQLFILYYGLPVYGIRLTPLMAALIGFCINSSAYQAEYIRGAIQSIGSGQMVAA 121 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IG+T+ Q +R IILPQ + ++EFI +LK TS+A I PE+ A+ I S Sbjct: 122 LSIGMTKWQAVRLIILPQALRRVIPAWTNEFIYLLKYTSMAYIIGAPEMMAQAKFIASRN 181 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 ++ +Y AF+Y+ L ++ K+E + Sbjct: 182 FEFFKVYLLTAFIYIALVWLATVLFSKLEKRL 213 >gi|47568094|ref|ZP_00238799.1| amino acid ABC transporter, permease protein [Bacillus cereus G9241] gi|47555248|gb|EAL13594.1| amino acid ABC transporter, permease protein [Bacillus cereus G9241] Length = 214 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 66/163 (40%), Positives = 105/163 (64%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + + S I+ F V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGIVR-YTKIPVFSQILGFIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP +G+ + A+I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEVGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKGQMEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQ 176 >gi|332800262|ref|YP_004461761.1| polar amino acid ABC transporter, inner membrane subunit [Tepidanaerobacter sp. Re1] gi|332697997|gb|AEE92454.1| polar amino acid ABC transporter, inner membrane subunit [Tepidanaerobacter sp. Re1] Length = 224 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 62/144 (43%), Positives = 96/144 (66%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ I RGTP++VQLF+I+YGLP GI+ D A II+L +N SAY +E R +I+SI +G Sbjct: 57 YIEIIRGTPMIVQLFIIYYGLPDFGILLDRMPAAIIALGINSSAYQAEYFRGAILSIDEG 116 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q A+ A+G+T+ QTI +IILPQ + P S+E I ++K TSVA I +PE+ + Sbjct: 117 QGLAAQALGMTKSQTIVNIILPQALRLVLPPWSNELIYMVKYTSVAFLIAVPELMARGKM 176 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 I++ T++P+ + +Y+++ S Sbjct: 177 IITQTFKPMETLFWVGAIYVVVLS 200 >gi|255655794|ref|ZP_05401203.1| amino acid ABC transporter, permease protein [Clostridium difficile QCD-23m63] gi|296450968|ref|ZP_06892715.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP08] gi|296879066|ref|ZP_06903062.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP07] gi|296260186|gb|EFH07034.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP08] gi|296429939|gb|EFH15790.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP07] Length = 203 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 66/176 (37%), Positives = 106/176 (60%), Gaps = 2/176 (1%) Query: 29 CISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF 88 CI+ +IS+ +G +A +R+ + ++S I Y+ I RGTPLL+Q+ VIFYGLP +GIVF Sbjct: 13 CITLIISIPLGIGVAFLRLS-KNKLVSGITQCYILIMRGTPLLLQMIVIFYGLPLLGIVF 71 Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 D F A +++ LN++AY +EI R I SI +GQ++AS +G + + II PQ Sbjct: 72 DRFTAGVVAFFLNYAAYFAEIFRGGIQSIDRGQYEASKVLGFDKFTMYKRIIFPQVFKRI 131 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 P+S+E I+++K TS+ + + +I + +Q I L+ E +YLI + Sbjct: 132 LAPISNEVITLVKDTSLVYILGLNDILRISQ-IAMNREASLLPLFEAGAIYLIFVA 186 >gi|114769150|ref|ZP_01446776.1| amino acid ABC transporter protein, permease protein [alpha proteobacterium HTCC2255] gi|114550067|gb|EAU52948.1| amino acid ABC transporter protein, permease protein [alpha proteobacterium HTCC2255] Length = 218 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 125/216 (57%), Gaps = 3/216 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W N++ P LL ++VT+ + V++ ++G IA++++ + ++ I ++ Sbjct: 1 MEWDW-NVVASVTPSLL-NGLIVTVQATIVGAVLAYVLGLVIAILKMS-GNKAVAFITYW 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 R TPLLVQL+ +FY LP GI FVA +I L L+FS Y SE+ R+ I ++PKG Sbjct: 58 SSEFIRRTPLLVQLYFLFYVLPDFGIFLSPFVAGVIGLGLHFSTYTSEVYRAGIENVPKG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ ++ + T R +ILPQ I PL++ I++ K T + S IT+ E+F A Sbjct: 118 QWEAARSLNYSAYHTWRFVILPQAIPPMFPPLANYLITMFKETPLLSAITVVELFNAANI 177 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 ++ Y+ L + +L+++ +I +KIE+ Sbjct: 178 YSNSHYKYLEPMTLVGLFFLLVSIPAAMIALKIENK 213 >gi|89898982|ref|YP_521453.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89343719|gb|ABD67922.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 214 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 63/148 (42%), Positives = 93/148 (62%), Gaps = 3/148 (2%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +YV IF+GTPLL+QLF++++GL +G+ VA I LTL SAY++EI R + +IPK Sbjct: 55 WYVQIFQGTPLLMQLFLVYFGLALLGMDTSPLVAAAICLTLYASAYLTEIWRGCVNAIPK 114 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+AS ++ L Q +RH+ILPQ + + P + I+K T++AS I E+ + Q Sbjct: 115 GQWEASTSLALNFTQQMRHVILPQALHVAIAPTVGFLVQIIKGTALASVIGFVELTKAGQ 174 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCY 207 I + TYQP + Y FV L+ + CY Sbjct: 175 MISNATYQPFLAYI---FVGLLYFALCY 199 >gi|24379047|ref|NP_721002.1| putative glutamine ABC transporter, permease component [Streptococcus mutans UA159] gi|290580934|ref|YP_003485326.1| putative glutamine ABC transporter permease [Streptococcus mutans NN2025] gi|24376943|gb|AAN58308.1|AE014901_8 putative glutamine ABC transporter, permease component [Streptococcus mutans UA159] gi|254997833|dbj|BAH88434.1| putative glutamine ABC transporter permease component [Streptococcus mutans NN2025] Length = 228 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 80/219 (36%), Positives = 126/219 (57%), Gaps = 18/219 (8%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Y +V + AC+ F IIG +A+I RI D ++S FYVWIFRGTP++VQ+ Sbjct: 15 YGVLVTIMISACVVF-FGTIIGVLVALIKRSRIKVLDWLVS----FYVWIFRGTPMVVQI 69 Query: 75 ---FVI--FYGLP--HIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FV+ F +P G++ F + II L+LN AYISE++R+ I ++PKGQ +A Sbjct: 70 MISFVLLHFTNMPIVKFGVLDLDFSRLLPGIIVLSLNSGAYISEVVRAGIEAVPKGQLEA 129 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++G+ +R++ILPQ L +EFI+I+K +S+ TI + E++ AQ +V+ Sbjct: 130 AYSLGIKPVNAMRYVILPQAFKNILPALGNEFITIIKDSSLLQTIGVMELWNGAQSVVTA 189 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 TY PL AF YL++T+ + +E+ + S Sbjct: 190 TYLPLTPLLFGAFYYLMVTTLMSALVKLLENRFGKGDAS 228 >gi|256851769|ref|ZP_05557157.1| ABC transporter permease component [Lactobacillus jensenii 27-2-CHN] gi|260661514|ref|ZP_05862426.1| ABC transporter permease component [Lactobacillus jensenii 115-3-CHN] gi|282931983|ref|ZP_06337446.1| amino acid ABC transporter, permease protein [Lactobacillus jensenii 208-1] gi|297205391|ref|ZP_06922787.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus jensenii JV-V16] gi|256615727|gb|EEU20916.1| ABC transporter permease component [Lactobacillus jensenii 27-2-CHN] gi|260547571|gb|EEX23549.1| ABC transporter permease component [Lactobacillus jensenii 115-3-CHN] gi|281303889|gb|EFA96028.1| amino acid ABC transporter, permease protein [Lactobacillus jensenii 208-1] gi|297149969|gb|EFH30266.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus jensenii JV-V16] Length = 534 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 125/214 (58%), Gaps = 14/214 (6%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT--------- 52 K WF +++ ++ A + +TL +A + + IG + VIR + T Sbjct: 284 KTNWFVSTWNTYGSMILAGVGMTLLLALVGTIAGFFIGLVVGVIRTIPTPTSLLNRWLLK 343 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEI 109 +++ ++ YV +FRGTP++VQ VI+YG+ H+ + + VA +I +++N AY++E+ Sbjct: 344 VVNFLLSVYVEVFRGTPMMVQAAVIYYGIAQFWHLNL--NRTVAALIIVSINTGAYLAEV 401 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IR I++ PKGQ++A+ A+G++ Q + +IILPQ I +++EFI +K TSV S I Sbjct: 402 IRGGIMATPKGQFEAASALGMSHNQRMWNIILPQAIKNCLPSITNEFIVNIKDTSVLSII 461 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ E+F I S +++ Y ++ +YL+LT Sbjct: 462 SVSELFFVGSTIASQSFEFFQTYLMISAIYLMLT 495 >gi|225175910|ref|ZP_03729902.1| polar amino acid ABC transporter, inner membrane subunit [Dethiobacter alkaliphilus AHT 1] gi|225168498|gb|EEG77300.1| polar amino acid ABC transporter, inner membrane subunit [Dethiobacter alkaliphilus AHT 1] Length = 225 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 74/221 (33%), Positives = 131/221 (59%), Gaps = 11/221 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I F + ++AA + T+ I + V+ LI+G IA++RI I++ Y+W Sbjct: 10 FSVIPQFFSRFIFAAWM-TMQITTLGIVLGLILGLVIALMRIS-PIKILNAPAKAYIWAI 67 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLL+QL +I+ G+ I + + + A +I+L ++ +AY++EI R +I SI +GQ +A+ Sbjct: 68 RGTPLLLQLLIIYNGMAPI-MRIERYPAAVIALGIHNAAYLAEIFRGAIQSIDRGQREAA 126 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+T Q ++ IILPQ + PL ++FI LK +S+AS I +PE+ A++ S+ Sbjct: 127 MSLGMTSWQAMKRIILPQAFKRAVPPLGNQFIIALKDSSLASVIAVPELLSRARQFGSSN 186 Query: 186 YQPLIIYCELAFV----YLILTSFCYIIQIKIESSVTQHTY 222 + +Y E+ + YLI+TS ++ +E + Y Sbjct: 187 F----LYMEMLVIAGIYYLIMTSVLTVVVNHVEERLRVSEY 223 >gi|255026867|ref|ZP_05298853.1| hypothetical protein LmonocytFSL_12011 [Listeria monocytogenes FSL J2-003] Length = 213 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 125/212 (58%), Gaps = 7/212 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + I++ P LL A TL + ++ V S+ +G +A+ I + I++ Y+WI R Sbjct: 2 DYIMEILPALLDGA-KTTLLVFAVTLVCSIPLGAVVAIGNIS-KIAPLKFILNIYIWIMR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL I+YGLP IG+VFD A+ I+ LN++AY +EI R +SI GQ++++ Sbjct: 60 GTPLLLQLIFIYYGLPIIGVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENGQYESAK 119 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--T 184 +GLT QT+R I+LPQ + + +E I+++K +S+ + I ++ + + +S Sbjct: 120 VLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDV 179 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 T PL++ +A +YL LT+ ++ ++E Sbjct: 180 TLIPLVL---VAAIYLALTAILTVLFKQLEKR 208 >gi|225868950|ref|YP_002744898.1| amino acid ABC transporter permease [Streptococcus equi subsp. zooepidemicus] gi|225702226|emb|CAW99967.1| putative amino acid ABC transporter permease protein [Streptococcus equi subsp. zooepidemicus] Length = 227 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 122/212 (57%), Gaps = 12/212 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 Y +V + AC+ F IIG + +I+ + S ++ YVWIFRGTP++VQ+ + Sbjct: 15 YGVLVTMMISACVVF-FGTIIGLLVTLIKRSHIKPL-SWLVSLYVWIFRGTPMVVQIMIA 72 Query: 78 F-----YGLPHIG-----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 F LP +G + F + II ++LN AYISEI+R+ I ++PKGQ +A+Y+ Sbjct: 73 FAWLHFNDLPIVGFGVLDLDFSRLLPGIIIISLNSGAYISEIVRAGIEAVPKGQLEAAYS 132 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ K +R+++LPQ + T L +E I+I+K +++ TI + E++ AQ +V+ TY Sbjct: 133 LGIRPKHAMRYVVLPQALRTILPALGNELITIIKDSALLQTIGVMELWNGAQSVVAATYL 192 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 P+ AF YL++T+ + +E + Q Sbjct: 193 PITPLLFAAFYYLMVTTLLSYLLGALERKLAQ 224 >gi|320450573|ref|YP_004202669.1| amino acid ABC transporter permease [Thermus scotoductus SA-01] gi|320150742|gb|ADW22120.1| amino acid ABC transporter, permease protein [Thermus scotoductus SA-01] Length = 258 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 126/215 (58%), Gaps = 13/215 (6%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 S Q + +TL + IS + L+IG F + R+ + L FY+W+ RGTPLL Sbjct: 41 SAGQAMALGAEITLKLTLISSLAGLVIGVFAGMFRLS-RRLWVRLPASFYIWVTRGTPLL 99 Query: 72 VQLFVIFYGLPHIGI--------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 VQ+ + LP + V + A I+L+ N AY +E++R+ I +IPKGQW+ Sbjct: 100 VQILFAYNALPLLLQPLWPEAQQVLTPYWAAFIALSFNVGAYNAEVVRAGIQAIPKGQWE 159 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A++++GL+ T+R +ILPQ + PL + +++LK +S+AS I + E+ + QRI+S Sbjct: 160 AAWSLGLSPADTMRFVILPQALRIVVPPLVNNVVALLKDSSLASVIALTELALSGQRIIS 219 Query: 184 TTYQPLIIYCELAFVYLILTS----FCYIIQIKIE 214 T++P+ +Y +A +YL+LT+ F +++ +++ Sbjct: 220 ATFRPVEVYLAVAAIYLLLTTVLTFFTNLLERRLQ 254 >gi|313122913|ref|YP_004033172.1| ABC amino acid transporter permease/periplasmic component [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279476|gb|ADQ60195.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 527 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 122/214 (57%), Gaps = 14/214 (6%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF------FSDTIIS 55 K W ++ ++ Q++ I +TL I+ + + IG + ++R F +++ Sbjct: 280 KENWLVSMLKNYGQMILEGIGMTLLISLVGTIAGFFIGLLVGIVRTIPEPKNKFKKGLLA 339 Query: 56 L---IMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEI 109 ++ YV +FRGTP++VQ VI+YG+ HI + + VA +I +++N AY++E+ Sbjct: 340 FCKWLLSVYVEVFRGTPMMVQAAVIYYGIAQFWHINL--NRTVAALIIVSINTGAYLAEV 397 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IR IIS PKGQ++A+ A+G+T Q + IILPQ I +++EFI +K TSV S I Sbjct: 398 IRGGIISTPKGQFEAASALGMTHNQRMWSIILPQAIRNCLPSITNEFIVNIKDTSVLSII 457 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ E+F I S ++Q Y ++ +YL LT Sbjct: 458 SVSELFFVGSTIASQSFQFFQTYLVISVIYLFLT 491 >gi|270293060|ref|ZP_06199271.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] gi|270279039|gb|EFA24885.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] Length = 227 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 120/209 (57%), Gaps = 17/209 (8%) Query: 28 ACISFVISLIIGFF---IAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIFYGL 81 A I+ VIS+++ FF + V+ F + ++ F YVWIFRGTP++VQ+ + F L Sbjct: 17 ALITVVISILVVFFGTILGVLLAFAQRSRFKPLVWFANVYVWIFRGTPMMVQIMIAF-AL 75 Query: 82 PHI----------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 HI G+ + I+ +++N AY+SE +R+ I ++PKGQ +A+Y++G+ Sbjct: 76 MHIDAPTIQVGILGVDLSRLIPGILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIR 135 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 K +R++ILPQ I L +EFI+I+K +S+ STI + E++ A + +TTY PL Sbjct: 136 PKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSTIGVMELWNGATTVATTTYLPLTP 195 Query: 192 YCELAFVYLILTSFCYIIQIKIESSVTQH 220 AF YLI+TS + E+ + Q Sbjct: 196 LLFAAFYYLIMTSVLTVALKAFENYIGQG 224 >gi|300811497|ref|ZP_07091991.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497570|gb|EFK32598.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 527 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 122/214 (57%), Gaps = 14/214 (6%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF------FSDTIIS 55 K W ++ ++ Q++ I +TL I+ + + IG + ++R F +++ Sbjct: 280 KENWLVSMLKNYGQMILEGIGMTLLISLVGTIAGFFIGLLVGIVRTIPEPKNKFKKGLLA 339 Query: 56 L---IMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEI 109 ++ YV +FRGTP++VQ VI+YG+ HI + + VA +I +++N AY++E+ Sbjct: 340 FCKWLLSVYVEVFRGTPMMVQAAVIYYGIAQFWHINL--NRTVAALIIVSINTGAYLAEV 397 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IR IIS PKGQ++A+ A+G+T Q + IILPQ I +++EFI +K TSV S I Sbjct: 398 IRGGIISTPKGQFEAASALGMTHNQRMWSIILPQAIRNCLPSITNEFIVNIKDTSVLSII 457 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ E+F I S ++Q Y ++ +YL LT Sbjct: 458 SVSELFFVGSTIASQSFQFFQTYLVISVIYLFLT 491 >gi|121607717|ref|YP_995524.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121552357|gb|ABM56506.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 241 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 118/201 (58%), Gaps = 2/201 (0%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P +L A+ TL + + L++G +A+ R+ ++ HFY+W+FRGTPLLVQ Sbjct: 17 PYILSGALT-TLWLTLAAIAGGLVVGCALALARLS-RHRWLAAPAHFYIWVFRGTPLLVQ 74 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 L +I+ GLP +G+ + ++ L LN +AY++E++R I S+ GQ +A+ A+G + Sbjct: 75 LIIIYTGLPQLGVKLSVVESALLGLILNEAAYLAEVVRGGIQSVSVGQTNAARAVGFSSA 134 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q++R+I++PQ + L + +LK+TS+ S I++ E+ + Q ++ + L ++ Sbjct: 135 QSMRYIVMPQAMRLIIPTLGNSINGLLKTTSITSVISMEELLRRTQVLIQEKFMVLELFI 194 Query: 194 ELAFVYLILTSFCYIIQIKIE 214 A YL++T+ IQ +IE Sbjct: 195 VAAIYYLLMTTVWDFIQRRIE 215 >gi|323142729|ref|ZP_08077445.1| putative glutamine ABC transporter permease protein GlnM [Succinatimonas hippei YIT 12066] gi|322417480|gb|EFY08098.1| putative glutamine ABC transporter permease protein GlnM [Succinatimonas hippei YIT 12066] Length = 222 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 128/219 (58%), Gaps = 3/219 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 ++F+L ID FP L+ + TL IA +S + IIG +A++ + + + I + YV Sbjct: 3 DYFSLFIDCFPDLM-MGLGATLLIAVVSMFFAFIIGMILALMGLSRYKGLKA-IYYSYVA 60 Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RG P+L+ +F+G+ + I F+ VA II+L++N SA+++EI R I+++ KGQ Sbjct: 61 FIRGVPVLIFALFLFFGVGGLLNIQFNPIVAGIITLSINASAFLAEIFRGGILAVDKGQI 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ ++G +T+R+I+LPQ + PL ++FIS LK TS+ S I++ E+ +Q I+ Sbjct: 121 EAARSLGFGYFRTMRYIVLPQALRIMVPPLVNQFISTLKDTSILSVISVRELTMNSQIII 180 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + ++P +Y AF+Y ++ I IE + + Sbjct: 181 ARNFRPFEVYSYAAFIYFLVILLIAIAAKYIEKKMNESK 219 >gi|119946081|ref|YP_943761.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] gi|119864685|gb|ABM04162.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] Length = 216 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 68/192 (35%), Positives = 116/192 (60%), Gaps = 2/192 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D LL+AA TL ++ +F+ ++G + IR + ++ ++ YV +F+G PL Sbjct: 8 DILRNLLFAA-RWTLLLSLFAFIGGGLVGLALTFIRSI-KNPFLTKLVQIYVELFQGIPL 65 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L+QLF+ F+GL IG+ D++ A I+SLTL SA++ +I RS I ++PKGQW+A +GL Sbjct: 66 LMQLFLTFFGLSLIGLDVDAWSAAILSLTLFSSAFLHDIWRSCIEALPKGQWEACRTLGL 125 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T Q++RH+I PQ I + P + I+K T++AS I E+ + + + T+QP Sbjct: 126 THVQSMRHVIFPQAIKMAIAPTVGFSVQIVKGTALASIIGFVELTKAGTMLNNATFQPFK 185 Query: 191 IYCELAFVYLIL 202 ++ +A +Y ++ Sbjct: 186 VFALVALLYFVI 197 >gi|325685296|gb|EGD27410.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 527 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 122/214 (57%), Gaps = 14/214 (6%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF------FSDTIIS 55 K W ++ ++ Q++ I +TL I+ + + IG + ++R F +++ Sbjct: 280 KENWLVSMLKNYGQMILEGIGMTLLISLVGTIAGFFIGLLVGIVRTIPEPKNKFKKGLLA 339 Query: 56 L---IMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEI 109 ++ YV +FRGTP++VQ VI+YG+ HI + + VA +I +++N AY++E+ Sbjct: 340 FCKWLLSVYVEVFRGTPMMVQAAVIYYGIAQFWHINL--NRTVAALIIVSINTGAYLAEV 397 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IR IIS PKGQ++A+ A+G+T Q + IILPQ I +++EFI +K TSV S I Sbjct: 398 IRGGIISTPKGQFEAASALGMTHNQRMWSIILPQAIRNCLPSITNEFIVNIKDTSVLSII 457 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ E+F I S ++Q Y ++ +YL LT Sbjct: 458 SVSELFFVGSTIASQSFQFFQTYLVISVIYLFLT 491 >gi|332202680|gb|EGJ16749.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA41317] Length = 227 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 19/227 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM---HFYV 62 F+ + P Y A+V L C+ F +G + V+ F + ++ + YV Sbjct: 3 FSFLPKYLPYFNYGAVVTILISICVIF-----LGTILGVVLAFGQRSKFKPLVWLANLYV 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 WIFRGTP++VQ+ + F L HI G+ F + I+ +++N AY+SE +R+ Sbjct: 58 WIFRGTPMMVQIMIAF-ALMHINAPTIQIGILGVDFSRLIPGILIISMNSGAYVSETVRA 116 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++PKGQ +A+Y++G+ K +R++ILPQ I L +EFI+I+K +S+ S I + Sbjct: 117 GINAVPKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVM 176 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 E++ A + +TTY PL AF YLI+TS + E + Q Sbjct: 177 ELWNGATTVSTTTYLPLAPLLFAAFYYLIMTSILTVALKAFEKHMGQ 223 >gi|257888300|ref|ZP_05667953.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257896810|ref|ZP_05676463.1| amino acid ABC transporter [Enterococcus faecium Com12] gi|257899737|ref|ZP_05679390.1| amino acid ABC transporter [Enterococcus faecium Com15] gi|293572975|ref|ZP_06683918.1| amino acid ABC transporter, permease protein [Enterococcus faecium E980] gi|257824354|gb|EEV51286.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257833375|gb|EEV59796.1| amino acid ABC transporter [Enterococcus faecium Com12] gi|257837649|gb|EEV62723.1| amino acid ABC transporter [Enterococcus faecium Com15] gi|291606953|gb|EFF36332.1| amino acid ABC transporter, permease protein [Enterococcus faecium E980] Length = 213 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 75/219 (34%), Positives = 121/219 (55%), Gaps = 21/219 (9%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF-------- 60 +I+ PQLL A+ TL + + + SL +G +A + L +HF Sbjct: 4 LIEVMPQLLVGALT-TLKLFLFTLIGSLPLGIILA----------LGLSLHFKPLRYFLQ 52 Query: 61 -YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YVWI RGTPLL+QL +FYGLP IGIVFD F A +I+ LN++AY +EI R I SIP+ Sbjct: 53 TYVWIMRGTPLLLQLIFVFYGLPTIGIVFDRFEAALIAFILNYAAYFAEIFRGGIQSIPQ 112 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ + L+ QT+ I++PQ + +E I+++K +S+ + + ++ + A Sbjct: 113 GQYEAAQVLQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYILGLGDVMR-AG 171 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 +I L+ +A +YL LT I+ ++E + Sbjct: 172 KIAMERDATLLPLLGVAIIYLTLTGILTIVMKQVEGKLN 210 >gi|260461090|ref|ZP_05809339.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259033124|gb|EEW34386.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 215 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 121/211 (57%), Gaps = 14/211 (6%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 LL A V L +A +F+ I+G + RI +T I Y+ +F+GTPLL+QLF Sbjct: 14 LLAARWTVLLSLA--AFIGGAIVGMIVLFFRIS-KNTWSRRIASGYIALFQGTPLLMQLF 70 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 ++F+GLP +G+ + + A +I LT SAY++EI RS + ++P GQWDA ++GL Q Sbjct: 71 LMFFGLPMLGLRIEPWTAAVIGLTFFASAYLAEIWRSGVDALPLGQWDAGASLGLHYLQE 130 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R IILPQ + + P + ++KST++ S I E+ +T+ I + T++P +Y + Sbjct: 131 LRLIILPQAFSITRAPTVGFLVQLIKSTALTSIIGFEELVRTSNAINNATFEPFKVYGLV 190 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 A ++ ++ C+ +TQ+ ++K Sbjct: 191 ALIFFVM---CF--------PLTQYARRLEK 210 >gi|320547054|ref|ZP_08041352.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] gi|320448291|gb|EFW89036.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] Length = 733 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 126/216 (58%), Gaps = 9/216 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + LI +++ QLL + TL + ISF I++IIG ++ + + ++ I +V + Sbjct: 516 WGLIKNNYSQLL-TGLGTTLSLTLISFAIAMIIGIIFGMMAVA-PNKVLRTISAIFVDVV 573 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RG PL++ IF+G+P++ + F+A I+L+LN AYI+EI+R I ++P Sbjct: 574 RGIPLMIVAAFIFWGIPNLIESMTGHQSPINDFLAATIALSLNAGAYIAEIVRGGIEAVP 633 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +AS ++G++ +T++ +ILPQ + ++F+ LK T++ S I + E+FQT Sbjct: 634 KGQMEASRSLGISYGKTMQKVILPQAVRVMLPNFINQFVISLKDTTIVSAIGLVELFQTG 693 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + I++ YQ +Y LA +YL++ + + ++E Sbjct: 694 KIIIARNYQSFRMYAILAVIYLVMITLLTRLAKRLE 729 >gi|148992490|ref|ZP_01822185.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP9-BS68] gi|168484481|ref|ZP_02709433.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC1873-00] gi|168485772|ref|ZP_02710280.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC1087-00] gi|168489799|ref|ZP_02713998.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP195] gi|225856490|ref|YP_002738001.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae P1031] gi|147928807|gb|EDK79820.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP9-BS68] gi|172042312|gb|EDT50358.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC1873-00] gi|183571006|gb|EDT91534.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC1087-00] gi|183571820|gb|EDT92348.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP195] gi|225725161|gb|ACO21013.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae P1031] gi|332203975|gb|EGJ18042.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA47368] Length = 227 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 19/227 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM---HFYV 62 F+ + P Y A+V L C+ F +G + V+ F + ++ + YV Sbjct: 3 FSFLPKYLPYFNYGAVVTILISICVIF-----LGTILGVVLAFGQRSKFKPLVWLANLYV 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 WIFRGTP++VQ+ + F L HI G+ F + I+ +++N AY+SE +R+ Sbjct: 58 WIFRGTPMMVQIMIAF-ALMHINAPTIQIGILGVDFSRLIPGILIISMNSGAYVSETVRA 116 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++PKGQ +A+Y++G+ K +R++ILPQ I L +EFI+I+K +S+ S I + Sbjct: 117 GINAVPKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVM 176 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 E++ A + +TTY PL AF YLI+TS + E + Q Sbjct: 177 ELWNGATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQ 223 >gi|227552460|ref|ZP_03982509.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] gi|227178406|gb|EEI59378.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] Length = 237 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 122/211 (57%), Gaps = 5/211 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-IRIFFSDTIISLIMHFYVWIFRG 67 +I+ PQLL A+ TL + + + SL +G +A+ + + F + + YVWI RG Sbjct: 28 LIEVMPQLLVGALT-TLKLFLFTLIGSLPLGIILALGLSLHFKP--LRYFLQTYVWIMRG 84 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL +FYGLP IGIVFD F A +I+ LN++AY +EI R I SIP+GQ++A+ Sbjct: 85 TPLLLQLIFVFYGLPTIGIVFDRFEAALIAFILNYAAYFAEIFRGGIQSIPQGQYEAAQV 144 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 + L+ QT+ I++PQ + +E I+++K +S+ + + ++ + A +I Sbjct: 145 LQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYILGLGDVMR-AGKIAMERDA 203 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 L+ +A +YL LT I+ ++E + Sbjct: 204 TLLPLLGVAIIYLTLTGILTIVMKQVEGKLN 234 >gi|91784321|ref|YP_559527.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia xenovorans LB400] gi|91688275|gb|ABE31475.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] Length = 265 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 73/237 (30%), Positives = 136/237 (57%), Gaps = 18/237 (7%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 + + + D P LL +VVT+ A I+ ++ +IG + + + + + ++ Y+W Sbjct: 14 FLHFVFDPRPALLQG-LVVTVLGAAIAQLLGTVIGVVLGLSGMHRA-LPLRVLNQGYIWF 71 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSF---------------VAIIISLTLNFSAYISEI 109 FRGTP+LVQL +I++GLP++ + FD F VA +I+ L+ +AY+SEI Sbjct: 72 FRGTPVLVQLVLIYFGLPYL-VGFDLFPAVMSLGPLHLSGALVAGVIAFGLHEAAYMSEI 130 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R+S+ SI GQ +A+ A+G+T +R I+LPQ + L ++F ++LK+T++ S I Sbjct: 131 TRASVGSIDPGQMEAALAVGMTPAMAMRRIVLPQAVPLIVPALGNQFNNMLKTTALLSVI 190 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 + E+F+ A+++ + T+ +Y ++ YL+LT IQ +ES +++ + + Sbjct: 191 GVSEMFRVAEQMQAATFMTFEVYLGVSVYYLMLTGVWTFIQHGLESWLSRGGRNGKR 247 >gi|78059831|ref|YP_366406.1| ABC amino acid transporter, inner membrane subunit [Burkholderia sp. 383] gi|77964381|gb|ABB05762.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia sp. 383] Length = 218 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 117/203 (57%), Gaps = 6/203 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ I+FV + GF + +RI S + ++ YV +F+GTPLL+QLF+ F+GLP Sbjct: 20 TVLLSLITFVGGSVAGFALLAMRISASAALRRFVI-LYVELFQGTPLLMQLFLGFFGLPL 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 IGI +VA + LTLN SAY+++I R + ++P+GQW+A+ ++G+T Q +R+++ PQ Sbjct: 79 IGIDVTPWVAASVVLTLNASAYLTDIWRGCVDAVPRGQWNAAASLGMTWTQQLRYVVWPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + P + +KST++ S I + E+ +T I + ++P IY +A +Y Sbjct: 139 AWKIALPPTVGFLVQAVKSTALTSIIGLTELTKTGNIITNAVFKPFPIYAMVALLY---- 194 Query: 204 SFCYIIQIKIESSVTQHTYSVDK 226 F + + V + Y V K Sbjct: 195 -FAMCFPLTWYARVLERRYRVAK 216 >gi|259418369|ref|ZP_05742287.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Silicibacter sp. TrichCH4B] gi|259345764|gb|EEW57608.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Silicibacter sp. TrichCH4B] Length = 224 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 67/190 (35%), Positives = 116/190 (61%), Gaps = 12/190 (6%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++Y W D P LL + +TL +A + +L++ +AV R+F ++ ++ Sbjct: 6 LEYMW-----DLVPILL-GYVPLTLFMAVVGMACALVLASILAVERVF-QIPVLDGVVRL 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI----GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ FRGTPLLVQLF+ +YGLP + G + + A I+ LTL+FSAY++E IR++I+ Sbjct: 59 FISFFRGTPLLVQLFLFYYGLPQVLSFLGTI-NGVTATIMGLTLHFSAYMAESIRAAILG 117 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + + QW+A+ A+G+T+ Q +R IILPQ +A L + FI ++K TS+A T+ + E+ Sbjct: 118 VDRSQWEAAQAVGMTQGQMMRQIILPQAARVAAPTLVNYFIDMIKGTSLAFTLGVTELMG 177 Query: 177 TAQRIVSTTY 186 Q+ + ++ Sbjct: 178 ATQKEAAGSF 187 >gi|307130004|ref|YP_003882020.1| amino acid ABC transporter permease [Dickeya dadantii 3937] gi|306527533|gb|ADM97463.1| Amino acid ABC transporter, permease protein [Dickeya dadantii 3937] Length = 281 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 124/209 (59%), Gaps = 5/209 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +L D F Q ++V+T+ IS + +++ A R+ S I FYV +F Sbjct: 62 MHLSPDGFIQGAVLSVVITI----ISMLFCILLAVITAAGRLS-SSAIAFGCATFYVSLF 116 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQ+ +I+ LP +GIV +F + II+L+LN+ AY++E IRS ++++P+GQ +A+ Sbjct: 117 RGTPLLVQVLIIYLALPQVGIVMSAFTSGIIALSLNYGAYLAETIRSGVLAVPRGQKEAA 176 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL+R I H++ PQ + P S+FIS++K +S+ S + + E+ AQ +T Sbjct: 177 MALGLSRWVIITHVVAPQALRIIIPPAGSQFISMIKDSSLVSLMGLWELNFLAQSYGRST 236 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Y + + A +Y +L+ ++Q ++E Sbjct: 237 YHYMEMLTTAAVIYWLLSIGLELLQGRLE 265 >gi|171779932|ref|ZP_02920836.1| hypothetical protein STRINF_01719 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281280|gb|EDT46715.1| hypothetical protein STRINF_01719 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 743 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 67/216 (31%), Positives = 127/216 (58%), Gaps = 9/216 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + LI +++ QLL + + TL + ISF I+++IG ++ + + ++ I +V + Sbjct: 526 WGLIKNNYSQLL-SGLGTTLSLTLISFAIAMVIGIIFGMMAVA-PNKVLRTISAVFVDVV 583 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RG PL++ IF+G+P++ + F+A I+L+LN AYI+EI+R I ++P Sbjct: 584 RGIPLMIVAAFIFWGIPNLIESMTGHQSPINDFLAATIALSLNAGAYIAEIVRGGIEAVP 643 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +AS ++G++ +T++ +ILPQ + ++F+ LK T++ S I + E+FQT Sbjct: 644 KGQMEASRSLGISYGKTMKKVILPQAVRVMLPNFINQFVISLKDTTIVSAIGLVELFQTG 703 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + I++ YQ +Y LA +YL++ + + ++E Sbjct: 704 KIIIARNYQSFRMYAILAIIYLVIITLLTRLAKRLE 739 >gi|218895475|ref|YP_002443886.1| putative amino acid ABC transporter, permease protein [Bacillus cereus G9842] gi|228899076|ref|ZP_04063348.1| Amino acid ABC transproter, permease [Bacillus thuringiensis IBL 4222] gi|228963460|ref|ZP_04124618.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar sotto str. T04001] gi|218541671|gb|ACK94065.1| putative amino acid ABC transporter, permease protein [Bacillus cereus G9842] gi|228796231|gb|EEM43681.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar sotto str. T04001] gi|228860517|gb|EEN04905.1| Amino acid ABC transproter, permease [Bacillus thuringiensis IBL 4222] Length = 230 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 76/225 (33%), Positives = 132/225 (58%), Gaps = 8/225 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + I S+P LL A IV TL + S V+ +IG A RI ++ +++ I H Y+ I Sbjct: 2 FEIFISSYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-NNKVLNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGN 178 Query: 186 YQPLIIYCELAFVYLIL----TSFCYIIQIKIESSVTQHTYSVDK 226 +Q L Y + YL+L T F +++ +++ T +++ V+K Sbjct: 179 FQQLDTYIIVGAYYLVLVLLFTYFVNLLEKRLQRKET-NSFQVNK 222 >gi|150389461|ref|YP_001319510.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus metalliredigens QYMF] gi|149949323|gb|ABR47851.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus metalliredigens QYMF] Length = 217 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 116/197 (58%), Gaps = 15/197 (7%) Query: 35 SLIIGFFIAVIRIFFS----------DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI 84 +L++ FF ++ +FF + I+ Y+ RGTPLLVQL +I+YGLPH+ Sbjct: 20 TLLLAFFTVLLGVFFGVALALMRLSKNPILKGFAASYIEFIRGTPLLVQLLIIYYGLPHL 79 Query: 85 -GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 G+ F A I++LT N +AYI+EIIR+ I+S+ KGQ +A+ ++G+ ++HII+PQ Sbjct: 80 TGMRFPDLFAGIVALTFNSAAYIAEIIRAGIMSVDKGQMEAARSLGMPHSMAMKHIIIPQ 139 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY---QPLIIYCELAF-VY 199 L +EFI ++K +++ S I I +I +TA + TY +PLI+ + F + Sbjct: 140 AFKNILPALGNEFIVVIKESAIVSIIGISDIMRTATIVRGNTYRPFEPLIVAAVMYFMIT 199 Query: 200 LILTSFCYIIQIKIESS 216 L++ +++ ++ +S Sbjct: 200 FTLSNLMRMMERRLRAS 216 >gi|114565875|ref|YP_753029.1| ABC transporter permease [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336810|gb|ABI67658.1| putative ABC transporter permease protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 213 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 122/200 (61%), Gaps = 7/200 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + II P +L + VTL + I+ V++L +G + + RI S + + M FYVW+FR Sbjct: 2 DYIIMLLPSML-KGLTVTLKLFSITLVMALPLGVIMGMARIS-SFSPLRWFMEFYVWLFR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL +++GL +G+ + +A ++ LN+SAY++EI R+ I SI +GQ++A+ Sbjct: 60 GTPLLLQLLFMYFGLMTLGLRLEREMAAYLAFVLNYSAYLAEIFRAGIQSIDRGQYEAAD 119 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV--ST 184 +GL+R QT+ +IILPQ P+ +E I+++K T++ + I E+ + A+ V Sbjct: 120 VLGLSRYQTMTNIILPQVFKRVLPPIGNEVINLVKDTALVYVLAISELSRVARTHVMRDD 179 Query: 185 TYQPLIIYCELAFVYLILTS 204 T+ P +I A YL++T Sbjct: 180 TFIPFLI---AAIFYLMMTG 196 >gi|323490322|ref|ZP_08095537.1| polar amino acid ABC transporter, inner membrane subunit [Planococcus donghaensis MPA1U2] gi|323395992|gb|EGA88823.1| polar amino acid ABC transporter, inner membrane subunit [Planococcus donghaensis MPA1U2] Length = 222 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 121/206 (58%), Gaps = 4/206 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + + + ++P L A VVTL + I ++ IG A+++I S I+ I + Y+ + Sbjct: 9 YEVFMRTYPGFLRAT-VVTLQLTAIGVILGTAIGLVFALMKISGSK-ILQGIANVYITVI 66 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ +++G+ I D+F A I+L ++ AYI+EI R +I + GQ +AS Sbjct: 67 RGTPLIVQIMFLYFGIVEI-YTMDNFWAGAIALGIHNGAYIAEIFRGAIQGVDPGQREAS 125 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ RKQT++ I+ PQ + S PL ++FI LK +S+ I + EIF A R + + Sbjct: 126 MSLGMNRKQTMQRIVFPQALRRSIPPLGNQFIITLKDSSLVYIIGVSEIFALANREAAQS 185 Query: 186 YQPLIIYCELAFVYLILTS-FCYIIQ 210 +QP + +A YL+L F Y+++ Sbjct: 186 FQPFESFLVVALYYLVLVMIFTYLLR 211 >gi|75759592|ref|ZP_00739679.1| Cystine transport system permease protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74492927|gb|EAO56056.1| Cystine transport system permease protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 251 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 76/225 (33%), Positives = 132/225 (58%), Gaps = 8/225 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + I S+P LL A IV TL + S V+ +IG A RI ++ +++ I H Y+ I Sbjct: 23 FEIFISSYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-NNKVLNSIAHVYIAII 80 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 81 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 139 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 140 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGN 199 Query: 186 YQPLIIYCELAFVYLIL----TSFCYIIQIKIESSVTQHTYSVDK 226 +Q L Y + YL+L T F +++ +++ T +++ V+K Sbjct: 200 FQQLDTYIIVGAYYLVLVLLFTYFVNLLEKRLQRKET-NSFQVNK 243 >gi|282882686|ref|ZP_06291296.1| arginine transport system permease protein ArtQ [Peptoniphilus lacrimalis 315-B] gi|300814297|ref|ZP_07094569.1| putative arginine ABC transporter, permease protein ArtQ [Peptoniphilus sp. oral taxon 836 str. F0141] gi|281297499|gb|EFA89985.1| arginine transport system permease protein ArtQ [Peptoniphilus lacrimalis 315-B] gi|300511564|gb|EFK38792.1| putative arginine ABC transporter, permease protein ArtQ [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 225 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 120/204 (58%), Gaps = 11/204 (5%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N I P L A VT+ ++ I ++ L IG +A+++I + ++ I Y+ I R Sbjct: 9 NFIKTFLPAYLKGA-GVTIKLSLIGVILGLTIGIVLALMKIS-KNKLLKFIASAYIEIVR 66 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSF-------VAIIISLTLNFSAYISEIIRSSIISIPK 119 GTP+LVQ+ ++++GL I + DS + +S++LN +AY++EIIRS I S+ Sbjct: 67 GTPMLVQIMIVYFGLKKI--IPDSLPYLKAPMLLCALSISLNSAAYVAEIIRSGINSVDN 124 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ ++GLTR Q +R IILPQ + L +EFI+++K +S+ T+ + E+ + + Sbjct: 125 GQMEAARSLGLTRSQAMRKIILPQAVKNILPALVNEFITLIKESSIVYTVGVAELMYSGK 184 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I S TYQ + + A +Y I+T Sbjct: 185 SIASATYQAVRPFIYAAIIYFIMT 208 >gi|157150220|ref|YP_001450326.1| glutamine ABC transporter permease and substrate binding protein [Streptococcus gordonii str. Challis substr. CH1] gi|157075014|gb|ABV09697.1| glutamine ABC transporter permease and substrate binding protein [Streptococcus gordonii str. Challis substr. CH1] Length = 485 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 124/219 (56%), Gaps = 9/219 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 L+ +++PQLL VT+ +A +SF I+L+IG + + + I +V + Sbjct: 268 LGLLKNNYPQLL-KGFGVTIALALLSFAIALVIGIIFGMFSVSPYKPL-RWIAEIFVDVI 325 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RG PL++ IF+G+P++ + FVA I+L+LN AYI+EI+R I ++P Sbjct: 326 RGVPLMILAAFIFWGIPNLIESITNQQTPINDFVAGTIALSLNSGAYIAEIVRGGIQAVP 385 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+FQT Sbjct: 386 AGQMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVITLKDTTIVSAIGLVELFQTG 445 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + I++ YQ +Y LA +YL++ +F + ++E + Sbjct: 446 KNIIARNYQSFRMYAILAVLYLLIITFLTRLAKRLEKRI 484 >gi|15900711|ref|NP_345315.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|182683734|ref|YP_001835481.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] gi|14972296|gb|AAK74955.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|182629068|gb|ACB90016.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] Length = 229 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 74/227 (32%), Positives = 122/227 (53%), Gaps = 19/227 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM---HFYV 62 F+ + P Y A+V L C+ F +G + V+ F + ++ + YV Sbjct: 5 FSFLPKYLPYFNYGAVVTILISICVIF-----LGTILGVVLAFGQRSKFKPLVWLANLYV 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 WIFRGTP++VQ+ + F L HI G+ F + I+ +++N AY+SE +R+ Sbjct: 60 WIFRGTPMMVQIMIAF-ALMHINAPTIQIGILGVDFSRLIPGILIISMNSGAYVSETVRA 118 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++PKGQ +A+Y++G+ K +R++ILPQ + L +EFI+I+K +S+ S I + Sbjct: 119 GINAVPKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVM 178 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 E++ A + +TTY PL AF YLI+TS + E + Q Sbjct: 179 ELWNGATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQ 225 >gi|22536670|ref|NP_687521.1| amino acid ABC transporter permease [Streptococcus agalactiae 2603V/R] gi|25010606|ref|NP_735001.1| hypothetical protein gbs0537 [Streptococcus agalactiae NEM316] gi|76787397|ref|YP_329224.1| polar amino acid ABC transporter permease [Streptococcus agalactiae A909] gi|22533510|gb|AAM99393.1|AE014214_7 amino acid ABC transporter, permease protein [Streptococcus agalactiae 2603V/R] gi|23094959|emb|CAD46181.1| unknown [Streptococcus agalactiae NEM316] gi|76562454|gb|ABA45038.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus agalactiae A909] gi|319744567|gb|EFV96920.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus agalactiae ATCC 13813] Length = 230 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 73/208 (35%), Positives = 124/208 (59%), Gaps = 12/208 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 Y +V + C+ F IIG IA+++ + ++++ +FYVW+FRGTP++VQ+ + Sbjct: 15 YGVMVTIMISTCVVF-FGTIIGVLIALVK-RTNLHFLTILANFYVWVFRGTPMVVQIMIA 72 Query: 78 F-----YGLPHI--GIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 F LP I G++ F + II ++LN AYISEI+R+ I ++P GQ +A+Y+ Sbjct: 73 FAWMHFNNLPTISFGVLDLDFTRLLPGIIIISLNSGAYISEIVRAGIEAVPSGQIEAAYS 132 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ K T+R++ILPQ L +EFI+I+K +++ TI + E++ AQ +V+ TY Sbjct: 133 LGIRPKNTLRYVILPQAFKNILPALGNEFITIIKDSALLQTIGVMELWNGAQSVVTATYS 192 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIES 215 P+ AF YL+LT+ + ++E Sbjct: 193 PVAPLLFAAFYYLMLTTILSALLKQMEK 220 >gi|158426030|ref|YP_001527322.1| amino acid ABC transporter, permease protein [Azorhizobium caulinodans ORS 571] gi|158332919|dbj|BAF90404.1| amino acid ABC transporter, permease protein [Azorhizobium caulinodans ORS 571] Length = 217 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 66/186 (35%), Positives = 110/186 (59%), Gaps = 1/186 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L A+ TL ++ I+F+ + G F+A+ R + I Y+ +F+GTPLL+QLF+ Sbjct: 13 LLMAVRWTLLLSAIAFLGGAVGGLFVALARTS-QWAWLRAIAGAYIQVFQGTPLLMQLFL 71 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +F+G G+ D +A I LTLN +A++ EI R I +IPKGQW+A+ A+GL + Sbjct: 72 VFFGANFFGLSIDPLMAAAIGLTLNGAAFLGEIWRGCIQAIPKGQWEAATALGLHYTTRM 131 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 + IILPQ + P + ++KSTS+AS I E+ + Q + + T++P +++ +A Sbjct: 132 KEIILPQAAKIAVAPTVGFLVLLVKSTSLASIIGFVELTRAGQIVNNATFRPFLVFGIVA 191 Query: 197 FVYLIL 202 +Y +L Sbjct: 192 AIYFVL 197 >gi|111657768|ref|ZP_01408489.1| hypothetical protein SpneT_02001056 [Streptococcus pneumoniae TIGR4] gi|148990332|ref|ZP_01821518.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] gi|148997101|ref|ZP_01824755.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] gi|149010549|ref|ZP_01831920.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP19-BS75] gi|168490915|ref|ZP_02715058.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC0288-04] gi|168492978|ref|ZP_02717121.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC3059-06] gi|168575482|ref|ZP_02721418.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae MLV-016] gi|169833263|ref|YP_001694278.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae Hungary19A-6] gi|194396808|ref|YP_002037460.1| amino acid ABC transporter permease [Streptococcus pneumoniae G54] gi|225858625|ref|YP_002740135.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae 70585] gi|237650814|ref|ZP_04525066.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CCRI 1974] gi|237821580|ref|ZP_04597425.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CCRI 1974M2] gi|303260286|ref|ZP_07346257.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP-BS293] gi|303261492|ref|ZP_07347440.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS292] gi|303264160|ref|ZP_07350081.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS397] gi|303267026|ref|ZP_07352898.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS457] gi|303269212|ref|ZP_07354989.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS458] gi|307067421|ref|YP_003876387.1| amino acid ABC transporter permease [Streptococcus pneumoniae AP200] gi|147756801|gb|EDK63841.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] gi|147765030|gb|EDK71959.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP19-BS75] gi|147924361|gb|EDK75452.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] gi|168995765|gb|ACA36377.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae Hungary19A-6] gi|183574731|gb|EDT95259.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC0288-04] gi|183577004|gb|EDT97532.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC3059-06] gi|183578509|gb|EDT99037.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae MLV-016] gi|194356475|gb|ACF54923.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae G54] gi|225721724|gb|ACO17578.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae 70585] gi|301801656|emb|CBW34356.1| putative amino acid ABC transporter permease protein [Streptococcus pneumoniae INV200] gi|302637626|gb|EFL68113.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS292] gi|302638610|gb|EFL69074.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP-BS293] gi|302641276|gb|EFL71646.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS458] gi|302643420|gb|EFL73695.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS457] gi|302646565|gb|EFL76791.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS397] gi|306408958|gb|ADM84385.1| ABC-type amino acid transport system, permease component [Streptococcus pneumoniae AP200] gi|327390176|gb|EGE88519.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA04375] gi|332077236|gb|EGI87698.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17545] Length = 227 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 74/227 (32%), Positives = 122/227 (53%), Gaps = 19/227 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM---HFYV 62 F+ + P Y A+V L C+ F +G + V+ F + ++ + YV Sbjct: 3 FSFLPKYLPYFNYGAVVTILISICVIF-----LGTILGVVLAFGQRSKFKPLVWLANLYV 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 WIFRGTP++VQ+ + F L HI G+ F + I+ +++N AY+SE +R+ Sbjct: 58 WIFRGTPMMVQIMIAF-ALMHINAPTIQIGILGVDFSRLIPGILIISMNSGAYVSETVRA 116 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++PKGQ +A+Y++G+ K +R++ILPQ + L +EFI+I+K +S+ S I + Sbjct: 117 GINAVPKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVM 176 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 E++ A + +TTY PL AF YLI+TS + E + Q Sbjct: 177 ELWNGATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQ 223 >gi|148986052|ref|ZP_01819073.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] gi|147921886|gb|EDK73012.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] Length = 227 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 75/224 (33%), Positives = 123/224 (54%), Gaps = 13/224 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ + P Y A+V L C+ F + I+G +A + ++ L + YVWIF Sbjct: 3 FSFLPKYLPYFNYGAVVTILISICVIF-LGTILGVVLAFGQCSKFKPLVWL-ANLYVWIF 60 Query: 66 RGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 RGTP++VQ+ + F L HI G+ F + I+ +++N AY+SE +R+ I Sbjct: 61 RGTPMMVQIMIAF-ALMHINAPTIQIGILGVDFSRLIPGILIISMNSGAYVSETVRAGIN 119 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++PKGQ +A+Y++G+ K +R++ILPQ + L +EFI+I+K +S+ S I + E++ Sbjct: 120 AVPKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELW 179 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 A + +TTY PL AF YLI+TS + E + Q Sbjct: 180 NGATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQ 223 >gi|238798540|ref|ZP_04642018.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia mollaretii ATCC 43969] gi|238717627|gb|EEQ09465.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia mollaretii ATCC 43969] Length = 220 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 116/202 (57%), Gaps = 8/202 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++F L+ P L+ A VT C V++++ GFFI V+ L F Sbjct: 1 MMGDFFQLLTAWLPMLIDGA--VTTASLC---VVAIVAGFFIGVVIYLMESGRSRLGRGF 55 Query: 61 ---YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 Y+ +FRGTP+L Q+ + FY +G+ ++A +++LTLN +AY S+I+RS +I Sbjct: 56 ARVYISLFRGTPVLAQVLLCFYLPGELGLSLPGYLAAVLALTLNTAAYQSQILRSGFEAI 115 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +A+ GL+ +QT+ HI +PQ + + L SE I ++K+++V S I I ++ + Sbjct: 116 PPGQLEAAAMCGLSSRQTLWHIQIPQVLRLTLPSLISELIDVIKASAVVSVIAITDLMRV 175 Query: 178 AQRIVSTTYQPLIIYCELAFVY 199 Q++ S TY+PL +Y +A Y Sbjct: 176 GQQLASATYRPLEVYVAIALSY 197 >gi|299541805|ref|ZP_07052128.1| amino acid ABC transporter ATP-binding protein [Lysinibacillus fusiformis ZC1] gi|298725543|gb|EFI66184.1| amino acid ABC transporter ATP-binding protein [Lysinibacillus fusiformis ZC1] Length = 221 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 68/197 (34%), Positives = 123/197 (62%), Gaps = 2/197 (1%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + A+++TL + +S ++ +IIG A+++I + I+ LI YV++ RGTPL+VQ+F++ Sbjct: 19 FKAMLLTLELTVVSILLGIIIGLVFALLKIS-NIKILELISDIYVYLVRGTPLIVQIFIL 77 Query: 78 FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 ++G+ I ++ D F A ++L L+ AYISEI+R +I S+ GQ++A ++G+T+ T+R Sbjct: 78 YFGISGIFLLPD-FWAASLALALHNGAYISEILRGAIQSVDNGQFEAGRSLGMTKTLTLR 136 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 IILPQ + PL ++FI LK +S+A+ I++ E+F A + S + + +A Sbjct: 137 RIILPQAFRRALPPLGNQFIISLKDSSLAAFISMNELFNVATTLGSNNFDEMTYLLIVAV 196 Query: 198 VYLILTSFCYIIQIKIE 214 YL+L + + + E Sbjct: 197 YYLLLVALMTFVVNRTE 213 >gi|209546328|ref|YP_002278218.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539185|gb|ACI59118.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 213 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 65/194 (33%), Positives = 118/194 (60%), Gaps = 3/194 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ + FV I G +A+ R+ + ++ + Y+ +F+GTPLL+QLFV++YGL Sbjct: 16 TVVLSAVGFVCGCIAGLGVALARVS-GNPLLERLTAGYIAVFQGTPLLMQLFVVYYGLAL 74 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 IG++ D++VA+ I LTL+ SAY+ EI R SI ++P+GQ +A+ A+ L +R +ILPQ Sbjct: 75 IGLMLDAWVAVAIGLTLHASAYLGEIWRGSIEAVPRGQTEAAKALSLRYVSRMRDVILPQ 134 Query: 144 TITTSAVPLSSEF-ISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + S +P + F + ++K TS+AS + E+ + I + +QPL ++ + +Y ++ Sbjct: 135 ALRIS-LPATIGFLVQLIKGTSLASIVGFTELTRAGNIISNQIFQPLTVFGVVGILYFLM 193 Query: 203 TSFCYIIQIKIESS 216 I+ ++E Sbjct: 194 CCPLTILGARLERK 207 >gi|254253996|ref|ZP_04947313.1| ABC-type amino acid transport system permease component [Burkholderia dolosa AUO158] gi|124898641|gb|EAY70484.1| ABC-type amino acid transport system permease component [Burkholderia dolosa AUO158] Length = 218 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 66/188 (35%), Positives = 114/188 (60%), Gaps = 2/188 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 +F ID P LL A VVT+ I +FV+S ++G +A++++ + +S V + Sbjct: 2 FFQNAIDFLPILLKGA-VVTIEITACAFVLSSVLGLVLALLKVS-RNRAVSAAGSTIVNV 59 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RG P++VQLF +++ LP +G+ +F A ++ L + +SAY +E R+ I +I +GQ +A Sbjct: 60 IRGLPIIVQLFYMYFVLPDLGVQLSAFQAGVLGLGIAYSAYQAENFRAGIEAIDRGQIEA 119 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++AIG+ +R ++LPQ + P + + +LK +SVASTIT+ EI + Q I S+ Sbjct: 120 AHAIGMRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVASTITVAEITRAGQLIASS 179 Query: 185 TYQPLIIY 192 T+Q + +Y Sbjct: 180 TFQNMSVY 187 >gi|332969078|gb|EGK08117.1| arginine ABC superfamily ATP binding cassette transporter, membrane protein [Psychrobacter sp. 1501(2011)] Length = 241 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 80/231 (34%), Positives = 129/231 (55%), Gaps = 13/231 (5%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + W +I P LL + + +T+ + IS V+ LI G +A++R+ S+ ++ ++ Sbjct: 1 MDWNW-QVIFIYLPDLL-SGVALTVKLVVISGVLGLIFGLGLALLRLS-SNKLVQVLPFL 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV----------AIIISLTLNFSAYISEII 110 Y + FRGTPLLVQ+F+I+YGL + +SF+ II+ TLN SAY +EII Sbjct: 58 YTFFFRGTPLLVQIFLIYYGLSQFEFIKESFLWEPVLKQPFWCAIIAFTLNTSAYTAEII 117 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R +I SIP G+ +A+ AIG++R Q + I LP+ S+E I +LK +S+A TI Sbjct: 118 RGAIQSIPPGELEAADAIGMSRWQKLTRITLPRAFGIMIPAYSNEVIFMLKGSSLAMTIA 177 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + +I A+ I + TY +Y +YL+L+ + IE + +H Sbjct: 178 LMDITGIAKTISARTYTIFELYFAAGLIYLVLSWVILLTFRLIEKRMNRHA 228 >gi|77405308|ref|ZP_00782404.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] gi|77176103|gb|EAO78876.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] Length = 230 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 121/200 (60%), Gaps = 18/200 (9%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Y +V + C+ F IIG IA+++ + F ++++ +FYVW+FRGTP++VQ+ Sbjct: 15 YGVMVTIMISTCVVF-FGTIIGVLIALVKRTXLHF----LTILANFYVWVFRGTPMVVQI 69 Query: 75 FVIF-----YGLPHI--GIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + F LP I G++ F + II ++LN AYISEI+R+ I ++P GQ +A Sbjct: 70 MIAFAWMHFNNLPTISFGVLDLDFTRLLPGIIIISLNSGAYISEIVRAGIEAVPSGQIEA 129 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++G+ K T+R++ILPQ L +EFI+I+K +++ TI + E++ AQ +V+ Sbjct: 130 AYSLGIRPKNTLRYVILPQAFKNILPALGNEFITIIKDSALLQTIGVMELWNGAQSVVTA 189 Query: 185 TYQPLIIYCELAFVYLILTS 204 TY P+ AF YL+LT+ Sbjct: 190 TYSPVAPLLFAAFYYLMLTT 209 >gi|229154344|ref|ZP_04282464.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus ATCC 4342] gi|228629168|gb|EEK85875.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus ATCC 4342] Length = 214 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 66/163 (40%), Positives = 105/163 (64%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + + S I+ F V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGIVR-YTKIPVFSQILGFIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP +G+ + A+I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEVGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQ 176 >gi|126699384|ref|YP_001088281.1| amino acid ABC transporter permease [Clostridium difficile 630] gi|254975412|ref|ZP_05271884.1| amino acid ABC transporter, permease protein [Clostridium difficile QCD-66c26] gi|255092799|ref|ZP_05322277.1| amino acid ABC transporter, permease protein [Clostridium difficile CIP 107932] gi|255100912|ref|ZP_05329889.1| amino acid ABC transporter, permease protein [Clostridium difficile QCD-63q42] gi|255306802|ref|ZP_05350973.1| amino acid ABC transporter, permease protein [Clostridium difficile ATCC 43255] gi|255314541|ref|ZP_05356124.1| amino acid ABC transporter, permease protein [Clostridium difficile QCD-76w55] gi|255517216|ref|ZP_05384892.1| amino acid ABC transporter, permease protein [Clostridium difficile QCD-97b34] gi|255650322|ref|ZP_05397224.1| amino acid ABC transporter, permease protein [Clostridium difficile QCD-37x79] gi|260683435|ref|YP_003214720.1| amino acid ABC transporter permease [Clostridium difficile CD196] gi|260687031|ref|YP_003218164.1| amino acid ABC transporter permease [Clostridium difficile R20291] gi|115250821|emb|CAJ68645.1| ABC-type transport system, aminoacid-family permease [Clostridium difficile] gi|260209598|emb|CBA63248.1| amino acid ABC transporter, permease protein [Clostridium difficile CD196] gi|260213047|emb|CBE04401.1| amino acid ABC transporter, permease protein [Clostridium difficile R20291] Length = 203 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 64/176 (36%), Positives = 106/176 (60%), Gaps = 2/176 (1%) Query: 29 CISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF 88 CI+ ++S+ +G +A +R+ + ++S I Y+ I RGTPLL+Q+ VIFYGLP +GIVF Sbjct: 13 CITLIVSIPLGIGVAFLRLS-KNKLVSGITQCYILIMRGTPLLLQMIVIFYGLPLLGIVF 71 Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 D F A +++ LN++AY +EI R I SI +GQ++AS +G + + +I PQ Sbjct: 72 DRFTAGVVAFFLNYAAYFAEIFRGGIQSIDRGQYEASKVLGFDKFTMYKRVIFPQVFKRI 131 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 P+S+E I+++K TS+ + + +I + +Q I L+ E +YLI + Sbjct: 132 LAPISNEVITLVKDTSLVYILGLNDILRISQ-IAMNREASLLPLFEAGAIYLIFVA 186 >gi|229165585|ref|ZP_04293360.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH621] gi|228617892|gb|EEK74942.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH621] Length = 214 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 67/163 (41%), Positives = 105/163 (64%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A I+ V+S IIG I ++R + ++S I+ F V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVIGILR-YTKIPVVSQILGFIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP +G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEVGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|296132710|ref|YP_003639957.1| polar amino acid ABC transporter, inner membrane subunit [Thermincola sp. JR] gi|296031288|gb|ADG82056.1| polar amino acid ABC transporter, inner membrane subunit [Thermincola potens JR] Length = 225 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 72/199 (36%), Positives = 118/199 (59%), Gaps = 3/199 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I + P +L + T+ + IS I ++G +++R+ I+S + YV F Sbjct: 8 FDIIAEYLPMMLKIGVKTTIQLTVISVSIGTVLGLIFSILRLS-KFKILSFLSAVYVDFF 66 Query: 66 RGTPLLVQLFVIFYG-LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQ+ + + +P IG F S V+ +++L+LN AYI+EI R+ I SI +GQ +A Sbjct: 67 RGTPLLVQILMFHFAIMPAIG-RFPSIVSGLVALSLNSGAYIAEIFRAGIQSIDRGQMEA 125 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G+T Q +R+II+PQ L +EFI++LK +S+ S I + E+ T I Sbjct: 126 ARSLGMTYGQAMRYIIVPQAFKRVLPALGNEFIAMLKDSSLVSVIAVQELAMTGSLISGR 185 Query: 185 TYQPLIIYCELAFVYLILT 203 T +P + +A +YLILT Sbjct: 186 TARPFEAWIPVAILYLILT 204 >gi|325567192|ref|ZP_08143859.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] gi|325158625|gb|EGC70771.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] Length = 214 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 126/212 (59%), Gaps = 3/212 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F +++ PQL+ + +T+ + ++ + S+ +G A + + I+ LI+ YVW+ Sbjct: 2 FEYLVNVMPQLI-SGTGITVKLFALTLIGSIPLGILFAFV-LASRLRILKLIVQVYVWLM 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLL+QL +FYGLP +GIVFD F A +I+ +N++AY +EI R I SIP GQ++A+ Sbjct: 60 RGTPLLLQLIFVFYGLPILGIVFDRFEAALIAFIINYAAYFAEIFRGGIQSIPAGQYEAA 119 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 + L+ QTI+ II+PQ + + + +E I+++K TS+ + + ++ + +I Sbjct: 120 KVLRLSPIQTIQKIIIPQVVKITLPSVGNEVINLVKDTSLVYILGLSDVMRIG-KIAMER 178 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 L+ + +YL++T ++ +IE+ + Sbjct: 179 DSTLLPLVGVGLIYLVMTGVFTLLLKQIETKL 210 >gi|296158407|ref|ZP_06841238.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295891351|gb|EFG71138.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 265 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 72/237 (30%), Positives = 136/237 (57%), Gaps = 18/237 (7%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 + + + D P LL +VVT+ A I+ ++ +IG + + + + + ++ Y+W Sbjct: 14 FLHFVFDPRPALLQG-LVVTVLGAAIAQLLGTVIGVVLGLSGMHHA-LPLRVLNQGYIWF 71 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSF---------------VAIIISLTLNFSAYISEI 109 FRGTP+LVQL +I++GLP++ + FD F VA +I+ L+ +AY+SEI Sbjct: 72 FRGTPVLVQLVLIYFGLPYL-VGFDLFPAVMSLGPLHLSGALVAGVIAFGLHEAAYMSEI 130 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R+S+ SI GQ +A+ A+G+T +R I+LPQ + L ++F ++LK+T++ S I Sbjct: 131 TRASVGSINPGQMEAALAVGMTPAMAMRRIVLPQAVPLIVPALGNQFNNMLKTTALLSVI 190 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 + E+F+ A+++ + T+ +Y ++ YL+LT IQ +E+ +++ + + Sbjct: 191 GVSEMFRVAEQMQAATFMTFEVYLGVSVYYLMLTGVWTFIQHGLEAWLSRGGRNGKR 247 >gi|149007236|ref|ZP_01830900.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|221231612|ref|YP_002510764.1| amino acid ABC transporter permease [Streptococcus pneumoniae ATCC 700669] gi|225854330|ref|YP_002735842.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae JJA] gi|298230612|ref|ZP_06964293.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254377|ref|ZP_06977963.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503171|ref|YP_003725111.1| amino acid ABC superfamily transporter permease [Streptococcus pneumoniae TCH8431/19A] gi|147761274|gb|EDK68241.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|220674072|emb|CAR68587.1| putative amino acid ABC transporter permease protein [Streptococcus pneumoniae ATCC 700669] gi|225723507|gb|ACO19360.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae JJA] gi|298238766|gb|ADI69897.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus pneumoniae TCH8431/19A] Length = 227 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 74/227 (32%), Positives = 122/227 (53%), Gaps = 19/227 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM---HFYV 62 F+ + P Y A+V L C+ F +G + V+ F + ++ + YV Sbjct: 3 FSFLPKYLPYFNYGAVVTILISICVIF-----LGTILGVVLAFGQRSKFKPLVWLANLYV 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 WIFRGTP++VQ+ + F L HI G+ F + I+ +++N AY+SE +R+ Sbjct: 58 WIFRGTPMMVQIMIAF-ALMHINAPTIQIGILGVDFSRLIPGILIISMNSGAYVSETVRA 116 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++PKGQ +A+Y++G+ K +R++ILPQ + L +EFI+I+K +S+ S I + Sbjct: 117 GINAVPKGQLEAAYSLGIRLKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVM 176 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 E++ A + +TTY PL AF YLI+TS + E + Q Sbjct: 177 ELWNGATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQ 223 >gi|16262493|ref|NP_435286.1| ABC transporter, permease [Sinorhizobium meliloti 1021] gi|14523098|gb|AAK64698.1| ABC transporter, permease [Sinorhizobium meliloti 1021] Length = 218 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 122/204 (59%), Gaps = 3/204 (1%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFVI 77 AA T+ ++ I+F + G +A++R+ S+T + L ++ +F+GTPLL+QLF++ Sbjct: 15 AAAQWTIALSAIAFAGGSVGGLLVALMRV--SETRALRLFATGFIRVFQGTPLLMQLFLV 72 Query: 78 FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 F+G+ G + ++A I+L L+ SA++ EI R I ++PKGQ +A+ A+GL +++R Sbjct: 73 FFGMNIFGFAINPWIAATIALALHASAFLGEIWRGCIEAVPKGQREAATALGLRYFRSMR 132 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 H+ILPQ + P + ++K TS+AS I E+ + Q I + T+ P +++ +A Sbjct: 133 HVILPQAARIAVAPTVGFLVQLIKGTSLASIIGFTELTRQGQIINNATFSPFLVFGTVAA 192 Query: 198 VYLILTSFCYIIQIKIESSVTQHT 221 VY +L +I ++E+ ++ T Sbjct: 193 VYFLLCWPLSLIARRMETRFSRAT 216 >gi|206563319|ref|YP_002234082.1| ABC transporter permease [Burkholderia cenocepacia J2315] gi|198039359|emb|CAR55324.1| ABC transporter, permease protein [Burkholderia cenocepacia J2315] Length = 218 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 66/188 (35%), Positives = 114/188 (60%), Gaps = 2/188 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 +F ID P LL A VVT+ I +FV+S ++G +A++++ + +S V + Sbjct: 2 FFQNAIDFLPILLKGA-VVTIEITACAFVLSSVLGLILALLKVS-RNRAVSTAGSTIVNV 59 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RG P++VQLF +++ LP +G+ +F A ++ L + +SAY +E R+ I +I +GQ +A Sbjct: 60 IRGLPIIVQLFYMYFVLPDLGVQLSAFQAGVLGLGIAYSAYQAENFRAGIEAIDRGQIEA 119 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++AIG+ +R ++LPQ + P + + +LK +SVASTIT+ EI + Q I S+ Sbjct: 120 AHAIGMRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVASTITVAEITRAGQLIASS 179 Query: 185 TYQPLIIY 192 T+Q + +Y Sbjct: 180 TFQNMSVY 187 >gi|116627710|ref|YP_820329.1| ABC-type amino acid transport system, permease component [Streptococcus thermophilus LMD-9] gi|116100987|gb|ABJ66133.1| ABC-type amino acid transport system, permease component [Streptococcus thermophilus LMD-9] Length = 213 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 74/211 (35%), Positives = 125/211 (59%), Gaps = 9/211 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRG 67 +++ P LL A VVTL + I V+S+ +G +A +++I F ++ ++ YVWI RG Sbjct: 4 VLEVLPALLNGA-VVTLQVFFIVIVLSIPLGIVLAFLMQIRFKP--LNWLLTLYVWIMRG 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL ++Y LP +GIVFD A I++ TLN++AY +EI R I++IPKGQ++A+ Sbjct: 61 TPLLLQLIFVYYVLPSVGIVFDRLPAAILAFTLNYAAYFAEIFRGGILAIPKGQYEAAKM 120 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TT 185 + L+ QTIR+IILPQ + + +E I+++K +S+ + + ++ ++ + T Sbjct: 121 LKLSPFQTIRYIILPQVVKIVLPSIFNEIINLVKDSSLVYVLGVGDLLLESRTAANRDAT 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 P+ + +YLIL + IE Sbjct: 181 LAPMFVAGA---IYLILVGVVTVASKNIEKK 208 >gi|307706378|ref|ZP_07643190.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK321] gi|307709103|ref|ZP_07645562.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK564] gi|307618296|gb|EFN97451.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK321] gi|307620049|gb|EFN99166.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK564] Length = 227 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 74/228 (32%), Positives = 121/228 (53%), Gaps = 19/228 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM---HFYV 62 F+ + P Y A+V L C+ F +G + V+ F + ++ + YV Sbjct: 3 FSFLPKYLPYFNYGAVVTVLISICVVF-----LGTILGVVLAFGQRSKFKPLVWLANLYV 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 WIFRGTP++VQ+ + F L HI G+ + I+ +++N AY+SE +R+ Sbjct: 58 WIFRGTPMMVQIMIAF-ALMHINAPTIQVGILGVDLSRLIPGILIISMNSGAYVSETVRA 116 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++PKGQ +A+Y++G+ K +R++ILPQ I L +EFI+I+K +S+ S I + Sbjct: 117 GINAVPKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVM 176 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E++ A + +TTY PL AF YLI+TS + E + Q Sbjct: 177 ELWNGATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKRMGQG 224 >gi|224371141|ref|YP_002605305.1| ABC-type amino acid transport system, permease component [Desulfobacterium autotrophicum HRM2] gi|223693858|gb|ACN17141.1| ABC-type amino acid transport system, permease component [Desulfobacterium autotrophicum HRM2] Length = 229 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 74/193 (38%), Positives = 119/193 (61%), Gaps = 8/193 (4%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWIFRGTPLL 71 P L + VT+ I+ + ++S + G A+ R+ FS +++ I Y+ + R TPLL Sbjct: 24 PGPLIQGLGVTIKISVAALLLSSLFGLVAALARLSNLFSLRVLARI---YLELIRNTPLL 80 Query: 72 VQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 VQLF I++ + P + I F A +++L L AY SEIIR+ IISIP+GQW+A+ ++GL Sbjct: 81 VQLFFIYFVVSPTLNI--SRFAAAVLTLALFEGAYASEIIRAGIISIPQGQWEAAISLGL 138 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 +R T RH+ILPQ I PL+S+ +S++K +++ STI + +I Q I++ TY Sbjct: 139 SRHHTFRHVILPQAIRIMLPPLTSQMVSLVKDSALVSTIAVYDITMRGQEIMAETYLVFE 198 Query: 191 IYCELAFVYLILT 203 I+ +A +YL +T Sbjct: 199 IWLTIALIYLGIT 211 >gi|94986573|ref|YP_594506.1| ABC-type amino acid transport system, permease component [Lawsonia intracellularis PHE/MN1-00] gi|94730822|emb|CAJ54184.1| ABC-type amino acid transport system, permease component [Lawsonia intracellularis PHE/MN1-00] Length = 261 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 64/184 (34%), Positives = 111/184 (60%), Gaps = 5/184 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I VT + +S + +L +G + R+ + II+++ YV + RG PLLVQLF I+Y Sbjct: 60 GIFVTFEVTFLSIICTLPLGLLVGFGRLS-KNRIINILTSTYVEVIRGIPLLVQLFYIYY 118 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 L H F V+ II++T + AY+ E+ R+ I+++PKGQ +A+ ++G + QT+R++ Sbjct: 119 ALGH----FSPLVSAIIAITFCYGAYMGEVFRAGILTVPKGQEEAARSLGFNKYQTMRYV 174 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + P+ +E I++LK TS+ S I + ++ + + + T++ Y +A VY Sbjct: 175 ILPQALRAILPPIGNECIAMLKDTSLISIIAVADLLRRGREYAAVTFEYFETYTVIAIVY 234 Query: 200 LILT 203 LI+T Sbjct: 235 LIIT 238 >gi|170721102|ref|YP_001748790.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169759105|gb|ACA72421.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 215 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 64/184 (34%), Positives = 110/184 (59%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ ++F + G + V RI + L Y+ +F+GTPLL+QLF++F+G+ Sbjct: 19 TLLLSLVAFFFGGLAGLLVLVARIAQWPWLRGLARG-YIELFQGTPLLMQLFMVFFGIAL 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 G+ +++A I+LTL SA+++EI R + SIP GQW+AS ++ L+R + +RH+ILPQ Sbjct: 78 FGLDVSAWMAAAIALTLFTSAFLAEIWRGCVESIPNGQWEASGSLALSRMEQLRHVILPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T+V S I E+ +T + + T++P ++Y +A Y IL Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGGMLANATFEPFMVYGLVALGYFIL- 196 Query: 204 SFCY 207 CY Sbjct: 197 --CY 198 >gi|254456079|ref|ZP_05069508.1| ABC transporter, membrane spanning protein (nopaline) [Candidatus Pelagibacter sp. HTCC7211] gi|207083081|gb|EDZ60507.1| ABC transporter, membrane spanning protein (nopaline) [Candidatus Pelagibacter sp. HTCC7211] Length = 224 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 72/207 (34%), Positives = 126/207 (60%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+L++ SFP+LL +A V+TL + +S + + +G F AV+R+ ++ I+ + Y ++F Sbjct: 3 FDLMVTSFPKLL-SATVITLKLLSVSLIAGMFLGLFFAVLRMN-NNIFINKFAYGYSYVF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAII---------ISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQ+F+I++GL I + +F+ +I I+ LN AY SEI+RS+ + Sbjct: 61 RGTPLLVQIFIIYFGLGQIEYLRSTFIWVILKEPYWCAIIAFALNTGAYTSEILRSAFQT 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I G +A ++G++ K I +P I S +E I ++K TS+AST+T+ ++ Sbjct: 121 IKPGIIEAGKSLGISNKIIFYKIQIPIAIRQSLPAYGNEIILMMKGTSLASTVTLMDLTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I+STT++P+ ++ +YL +T Sbjct: 181 VAKYIISTTFKPIEVFIVAGGIYLFMT 207 >gi|13474098|ref|NP_105666.1| amino acid ABC transporter, permease protein [Mesorhizobium loti MAFF303099] gi|14024850|dbj|BAB51452.1| amino acid ABC transporter, permease protein [Mesorhizobium loti MAFF303099] Length = 215 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 58/166 (34%), Positives = 104/166 (62%), Gaps = 11/166 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ +F+GTPLL+QLF++F+GLP +G+ + + A ++ LT SAY++EI RS + ++P+G Sbjct: 56 YIALFQGTPLLMQLFLMFFGLPMLGLRIEPWTAAVLGLTFFASAYLAEIWRSGVDALPRG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QWDA ++GL Q +R IILPQ + + P + ++KST++ S I E+ +T+ Sbjct: 116 QWDAGASLGLHYLQELRLIILPQAFSITRAPTVGFLVQLIKSTALTSIIGFEELVRTSNA 175 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 I + T++P +Y +A ++ ++ C+ +TQ+ S++K Sbjct: 176 INNATFEPFKVYGLVALIFFLM---CF--------PLTQYARSLEK 210 >gi|222087817|ref|YP_002546355.1| ABC transporter membrane spanning protein (opine) [Agrobacterium radiobacter K84] gi|221725265|gb|ACM28421.1| ABC transporter membrane spanning protein (opine) [Agrobacterium radiobacter K84] Length = 278 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 72/183 (39%), Positives = 112/183 (61%), Gaps = 14/183 (7%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 I FV+S+ +GF A S+ +S + Y ++FRGTPLLVQLF+I+YGL + IV + Sbjct: 30 IGFVVSVPLGFLRAS-----SNRHLSGCVLIYTYVFRGTPLLVQLFLIYYGLGQLEIVRN 84 Query: 90 S---------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 S F +++L+LN +AY +E+ R+ I ++P+G +A+ A+GL+R IR II Sbjct: 85 SMFWPLLREPFWCALLALSLNSAAYTTEVFRAGIQAVPRGVVEAAQALGLSRIMQIRLII 144 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 P T ++E I +LK++S+AST+T+ EI A+R+VS T+ P I+ +YL Sbjct: 145 FPLAFRTVLPSYANEVIGMLKASSLASTVTLLEITGLARRMVSETFAPYEIFLAAGLIYL 204 Query: 201 ILT 203 LT Sbjct: 205 FLT 207 >gi|159186208|ref|NP_356121.2| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|159141342|gb|AAK88906.2| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 222 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 115/206 (55%), Gaps = 3/206 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y F+ +I+ P+LL A + T+ +A ++ ++G V R + L++ Sbjct: 1 MSYSLDFSAVIERLPELLLACLA-TIGLAIAGMSLATVLGVLGVVARRSRFKLLRGLVIG 59 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 F V R TP LVQ+F IF+ LP IGI + V II+L LN AY EIIR + SIPK Sbjct: 60 F-VEAIRNTPFLVQIFFIFFALPQIGIKLNPTVTAIIALALNGGAYAIEIIRGGVDSIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A A+GL R Q RHIIL + L+S+FI + +TSV ++I E+ AQ Sbjct: 119 GQVEAGLALGLHRAQIFRHIILKPALRAVYPSLTSQFIMLTLTTSVCTSIAAYELTSVAQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSF 205 +I + T++ +Y + +YL+++S Sbjct: 179 KIEADTFRSFEVYFSITLLYLVISSL 204 >gi|324324592|gb|ADY19852.1| amino acid ABC transporter, permease [Bacillus thuringiensis serovar finitimus YBT-020] Length = 221 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 66/166 (39%), Positives = 102/166 (61%), Gaps = 1/166 (0%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 ++TL IAC + +ISL I +I +FF II ++ YV + R TPLL+QLF +++GL Sbjct: 20 LLTLKIACFAIIISLFIASINGLI-LFFRIHIIHKVVRAYVEVARNTPLLIQLFFLYFGL 78 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 P +GI +F ++++ Y++E+IRS + SI K Q ++ YAIGL + Q R ++L Sbjct: 79 PSLGIKLSNFSIALLAMCFLGGGYMTEVIRSGLDSISKSQVESGYAIGLNKWQLFRFVVL 138 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 PQ T SA L + FI +LK TS+ S I +PE+ T ++S Y+ Sbjct: 139 PQAATISAPALFANFIFLLKETSIVSAIAVPELLYTTTNLISIYYK 184 >gi|209543091|ref|YP_002275320.1| polar amino acid ABC transporter inner membrane subunit [Gluconacetobacter diazotrophicus PAl 5] gi|209530768|gb|ACI50705.1| polar amino acid ABC transporter, inner membrane subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 243 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 113/203 (55%), Gaps = 1/203 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +VTL + + V ++G +AV++ ++S+ FYVW+FRGTPLLVQL V Sbjct: 18 IFRGALVTLWMTFAAMVFGCLLGLALAVMK-RSRHRVLSVPARFYVWLFRGTPLLVQLVV 76 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 I+ GLP + I +I L+LN +AY++EIIR+ + ++P GQ A+ A+G+ Q Sbjct: 77 IYAGLPKLDIRLSVTACAVIGLSLNEAAYLAEIIRAGLNAVPPGQIAAARALGMDEWQIS 136 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 I PQ PL + +LK+TSV S I++ E+ Q +Q +V + L ++ A Sbjct: 137 SRIAFPQAFRLIIPPLGNSVNGLLKTTSVTSVISMEELMQRSQILVQDQFMVLELFSVAA 196 Query: 197 FVYLILTSFCYIIQIKIESSVTQ 219 YL +T+ +Q +IE + Sbjct: 197 LYYLFMTTAWDFLQRRIERHAER 219 >gi|312278252|gb|ADQ62909.1| Amino acid (Glutamine) ABC transporter, permease protein [Streptococcus thermophilus ND03] Length = 213 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 125/211 (59%), Gaps = 9/211 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRG 67 +++ P LL A VVTL + I ++S+ +G +A +++I F ++ ++ YVWI RG Sbjct: 4 VLEVLPALLNGA-VVTLQVFFIVIILSIPLGIVLAFLMQIKFKP--LNWLLTLYVWIMRG 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL ++Y LP +GIVFD A I++ TLN++AY +EI R I++IPKGQ++A+ Sbjct: 61 TPLLLQLIFVYYVLPSVGIVFDRLPAAILAFTLNYAAYFAEIFRGGILAIPKGQYEAAKM 120 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TT 185 + L+ QTIR+IILPQ + + +E I+++K +S+ + + ++ ++ + T Sbjct: 121 LKLSSFQTIRYIILPQVVKIVLPSIFNEIINLVKDSSLVYVLGVGDLLLESRTAANRDAT 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 P+ + +YLIL + IE Sbjct: 181 LAPMFVAGA---IYLILVGVVTVASKNIEKK 208 >gi|331700315|ref|YP_004336554.1| polar amino acid ABC transporter inner membrane subunit [Pseudonocardia dioxanivorans CB1190] gi|326955004|gb|AEA28701.1| polar amino acid ABC transporter, inner membrane subunit [Pseudonocardia dioxanivorans CB1190] Length = 302 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 75/211 (35%), Positives = 117/211 (55%), Gaps = 23/211 (10%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF-----VIF 78 TL + +S I ++ G +AV+R + ++S Y+W+FRGTPL+ QL Sbjct: 72 TLVLTVLSMAIGIVGGVGLAVMRQS-PNPVVSGAAATYIWLFRGTPLIAQLLFWNFLAAL 130 Query: 79 YGLPHIGIVFD-------------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 Y +G+ F F A ++ L LN +AY++EI+R ++S+ +GQ +A+ Sbjct: 131 YPRLSLGVPFGPEFISVDTNVLITQFAACLLGLGLNEAAYMAEIVRGGMLSVDRGQAEAA 190 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G+TR QT+R I+LPQ + P +E IS+LK+TS+ I E+ +AQRI + Sbjct: 191 GALGMTRSQTMRRIVLPQAMRVIVPPTGNETISMLKTTSLVVVIGYFELLTSAQRISNQN 250 Query: 186 YQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 +Q PL+I AF YL+LTS I Q +E Sbjct: 251 FQVIPLLIVA--AFWYLVLTSLLTIGQGFVE 279 >gi|307319174|ref|ZP_07598604.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306895281|gb|EFN26037.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] Length = 218 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 122/204 (59%), Gaps = 3/204 (1%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFVI 77 AA T+ ++ I+F + G +A++R+ +DT + L ++ +F+GTPLL+QLF++ Sbjct: 15 AAAQWTIALSAIAFAGGSVGGLLVALMRV--ADTRALRLSATGFIRVFQGTPLLMQLFLV 72 Query: 78 FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 F+G+ G + ++A I+L L+ SA++ EI R I ++PKGQ +A+ A+GL +++R Sbjct: 73 FFGMNIFGFAINPWIAATIALALHASAFLGEIWRGCIEAVPKGQREAATALGLRYFRSMR 132 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 H+ILPQ + P + ++K TS+AS I E+ + Q I + T+ P +++ +A Sbjct: 133 HVILPQAARIAVAPTVGFLVQLIKGTSLASIIGFTELTRQGQIINNATFSPFLVFGTVAT 192 Query: 198 VYLILTSFCYIIQIKIESSVTQHT 221 VY +L +I ++E+ ++ T Sbjct: 193 VYFLLCWPLSLIARRMETRFSRAT 216 >gi|158321613|ref|YP_001514120.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus oremlandii OhILAs] gi|158141812|gb|ABW20124.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus oremlandii OhILAs] Length = 213 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 115/186 (61%), Gaps = 2/186 (1%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + T+ I ++ +S+ +G +A+ R+ + II+ ++ FY+ I RGTPLL+QL +F Sbjct: 13 SGMFATIEIFIVTLCLSIPLGLVVALGRLS-TVKIINRVIQFYILIMRGTPLLLQLVFVF 71 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 +GLP++GI D A +++LTLN++AY +EI R I SI +GQ++A+ +G ++ +TI+ Sbjct: 72 FGLPYVGITLDRKTAALLALTLNYAAYFAEIFRGGIDSINQGQYEAAMVLGFSKYRTIQR 131 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 IILPQ + +E I+++K TS+ + + E+ + A +I + L+ + V Sbjct: 132 IILPQVFKVVLPSVGNEVITLVKDTSLVYVVGLGELLR-AGKIAANRDASLLPLVAVGMV 190 Query: 199 YLILTS 204 YLIL S Sbjct: 191 YLILIS 196 >gi|297531646|ref|YP_003672921.1| polar amino acid ABC transporter inner membrane protein [Geobacillus sp. C56-T3] gi|297254898|gb|ADI28344.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. C56-T3] Length = 218 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 120/199 (60%), Gaps = 3/199 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I++ P + ++ T+ ++ + LI+G FI + ++ ++ ++ L +Y+ F Sbjct: 5 FDIIVEYAP-YFFQGLLATIGVSLAGIIFGLILGLFIGLGKMS-TNRLVRLPFSWYINFF 62 Query: 66 RGTPLLVQLFVIFYG-LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL+VQ+ ++ +G +P + V++ +SL+LN +AY++EI R+ I SI KGQ +A Sbjct: 63 RGTPLVVQILLVHFGVMPLFFAQPNGIVSLAVSLSLNSAAYVAEIFRAGIQSIDKGQMEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G+T Q +R+IILPQ + P ++EFI ++K +S+ I PEI + Sbjct: 123 ARSLGMTHAQAMRYIILPQALKRMIPPFANEFIVLIKDSSLGMVIAAPEIMYWGKAAAGE 182 Query: 185 TYQPLIIYCELAFVYLILT 203 Y+ Y +AF+YLILT Sbjct: 183 YYRVWEPYLTVAFIYLILT 201 >gi|290580730|ref|YP_003485122.1| putative glutamine ABC transporter, permease protein [Streptococcus mutans NN2025] gi|254997629|dbj|BAH88230.1| putative glutamine ABC transporter, permease protein [Streptococcus mutans NN2025] Length = 728 Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats. Identities = 69/219 (31%), Positives = 126/219 (57%), Gaps = 9/219 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F L+ +++ QLL + + TL +A +SF +++I+G ++ + T+ +I +V + Sbjct: 511 FGLLSNNYKQLL-SGLGTTLSLAILSFALAMIVGILFGMMSVSPYKTL-RIIASIFVDVV 568 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RG PL++ IF+G+P++ + FVA I+LTLN AYI+EI+R I ++P Sbjct: 569 RGIPLMIVAAFIFWGIPNLIESITGHQSPINDFVAGTIALTLNGGAYIAEIVRGGIEAVP 628 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS ++G++ K T++ IILPQ ++F+ LK T++ S I + E+FQ Sbjct: 629 SGQMEASRSLGISYKTTMKRIILPQAFKLMLPNFINQFVISLKDTTIISAIGLIELFQAG 688 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + I++ YQ +Y LA +YL++ + + ++E + Sbjct: 689 KIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRI 727 >gi|90962038|ref|YP_535954.1| polar amino acid ABC transporter permease [Lactobacillus salivarius UCC118] gi|227891057|ref|ZP_04008862.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] gi|301300403|ref|ZP_07206605.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|90821232|gb|ABD99871.1| Polar amino acid ABC transporter, permease protein [Lactobacillus salivarius UCC118] gi|227867146|gb|EEJ74567.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] gi|300214736|gb|ADJ79152.1| Polar amino acid ABC transporter, permease protein [Lactobacillus salivarius CECT 5713] gi|300852005|gb|EFK79687.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 213 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 121/213 (56%), Gaps = 11/213 (5%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFI--AVIRIFFSDTIISLIMHFYVWI 64 N +++ P LL A +TL I C + + SL +G + A+I F ++ I+ FYVW+ Sbjct: 2 NYVLEVLPSLLDGA-KMTLQIFCWTLIGSLPLGLIVGLALISRF---RLLKAILRFYVWL 57 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLL+QL +FYGLP +G+ F A + + LN++AY +EI R + SI KGQ+++ Sbjct: 58 MRGTPLLLQLIFVFYGLPLVGLTLGRFDAALFAFILNYTAYFAEIFRGGLQSIDKGQYES 117 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS- 183 + + LT QTIR I+ PQ + + +E I+++K +S+ I I ++ + S Sbjct: 118 AKVLRLTYWQTIRKIVTPQVVKIVLPSIGNEVINLVKDSSLVYVIGIGDLLRAGNVATSR 177 Query: 184 -TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 T PL++ + VYL++T+ I K+E Sbjct: 178 DVTLVPLVM---VGVVYLVMTAVLTFILRKLEQ 207 >gi|311031433|ref|ZP_07709523.1| amino acid ABC transporter ATP-binding protein [Bacillus sp. m3-13] Length = 220 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 117/201 (58%), Gaps = 7/201 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++ TL I IS VISL +G F A ++I ++ I + Y+++ RGTPL+VQ+FV +Y Sbjct: 21 GMLKTLQITAISIVISLFVGLFFAFLKIS-KIKVLEWIANTYIYLVRGTPLIVQIFVFYY 79 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GL +GI +F ++ ++L + AYI+EI R +I SI KGQ +A ++G+TR +R I Sbjct: 80 GLVQMGIT--AFWSVTLALAFHNGAYIAEIFRGTIQSIDKGQMEAGRSLGMTRNLAMRRI 137 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + PL ++FI LK +S+A+ I E+F AQ + ++ + ++ Y Sbjct: 138 ILPQAFRRALPPLGNQFIICLKDSSLAAFIGFYELFNVAQTQGANSFDYMTYLLVVSVYY 197 Query: 200 LILTS----FCYIIQIKIESS 216 L L F +++ K +S Sbjct: 198 LFLVGLIGIFVNLLERKFSAS 218 >gi|257877476|ref|ZP_05657129.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|257811642|gb|EEV40462.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] Length = 226 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 124/213 (58%), Gaps = 9/213 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ +S P LL + + T+ IA +SF+ ++G + + + + I + Y+ RG Sbjct: 10 LMWESLPYLL-SGLSYTVGIAVVSFLGGNVLGIMLTFLGML-ENPFIRGFVRGYLSFLRG 67 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 P LV LF++++GLP+ + A II TL SA+I EI R SI + +GQ+DA+YA Sbjct: 68 VPALVLLFLLYFGLPY---QLSALSAAIICFTLTSSAFIGEIYRGSIAGVDRGQFDAAYA 124 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL+ +T+R IILPQ S LS+ + +LK TS+A+ ITIP+IFQ A+ + T+ Sbjct: 125 LGLSFTKTMRLIILPQAFRISVPALSNVAMDLLKGTSLAAMITIPDIFQKAKIVGGRTFD 184 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + +Y +A +Y +L C +I+ + + QH Sbjct: 185 YMSMYVLVAIIYWLL---CILIEAG-QKRLEQH 213 >gi|222106504|ref|YP_002547295.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221737683|gb|ACM38579.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 222 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 116/200 (58%), Gaps = 2/200 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+++I+ P+L+ A + T+ +A I+ IIG F V R S + S + F V + Sbjct: 7 FSVVIERLPELILACLA-TIGLAIAGMSIATIIGIFGVVARRSPSRILRSATIGF-VELI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP LVQ+F IF+ LP IG+ + V I++L LN AY EIIR + SI KGQ +A Sbjct: 65 RNTPFLVQIFFIFFALPQIGVRLNPTVTAIVALGLNGGAYAIEIIRGGVDSIGKGQVEAG 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL R Q +RHIIL + L+S+F+ + +TSV ++I E+ AQ+I + T Sbjct: 125 LALGLHRAQILRHIILKPALRAVYPSLTSQFVMLTLTTSVCTSIAAYELTSVAQKIEADT 184 Query: 186 YQPLIIYCELAFVYLILTSF 205 ++ +Y + +YL+++S Sbjct: 185 FRSFEVYFSITLLYLVISSL 204 >gi|163740071|ref|ZP_02147475.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis BS107] gi|161386702|gb|EDQ11067.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis BS107] Length = 224 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 64/179 (35%), Positives = 110/179 (61%), Gaps = 7/179 (3%) Query: 44 VIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTL 100 V+RI D ++ L + F FRGTPLLVQLF+ +YGLP + V + A I+ LTL Sbjct: 46 VLRIPVLDQLVVLFISF----FRGTPLLVQLFLFYYGLPQVLSVLTQINGVSAAIMGLTL 101 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 +F+AY++E IR++I+ + + QW+A+ +IG+TR Q +R I+LPQ +A L + FI ++ Sbjct: 102 HFAAYMAESIRAAILGVDRSQWEAAQSIGMTRGQMMRRIVLPQAARIAAPTLVNYFIDMI 161 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 K TS+A T+ + E+ Q+ + ++ + +A +Y IL ++Q ++E+ + + Sbjct: 162 KGTSLAFTLGVTEMMGATQKEAAGSFLYFEAFLVVAVIYWILVEALSLVQRRLETHLNK 220 >gi|300311602|ref|YP_003775694.1| glutamine ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300074387|gb|ADJ63786.1| ABC-type glutamine transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 221 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 76/215 (35%), Positives = 136/215 (63%), Gaps = 2/215 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 MK + F+ + +S+P L++ +V T+ I S V+ ++G + + R+ +I + Sbjct: 1 MKLD-FSGVWESWPSLVHGTLV-TVEITAASLVVGCVLGLLVGLGRLSPQRRVIYGLCTI 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + RGTPLLVQLF+ F+GLPH+G++ ++V I+ L + AY+SEI+R +I SI +G Sbjct: 59 YLTLVRGTPLLVQLFLWFFGLPHVGVILPAYVCGILGLGIYSGAYVSEIVRGAIQSIERG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++GL + +R +ILPQ PL +EFI+++K++++ S +TI ++ ++ Sbjct: 119 QMEAARSLGLPYRMAMRRVILPQAFVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGEK 178 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 I+S TY+ L Y +A +YL+LTS +I ++E Sbjct: 179 IISVTYRSLETYLAIALIYLLLTSVTTLILRRVEK 213 >gi|289550425|ref|YP_003471329.1| Glutamate ABC transporter, periplasmic glutamine-binding protein [Staphylococcus lugdunensis HKU09-01] gi|289179957|gb|ADC87202.1| Glutamate ABC transporter, periplasmic glutamine-binding protein [Staphylococcus lugdunensis HKU09-01] Length = 485 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 114/185 (61%), Gaps = 2/185 (1%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 IV T+ ++ I +I ++G IA+ ++ IIS I Y+ I RGTPLLVQ+F++F+ Sbjct: 284 GIVNTIILSAIGVIIGAVLGTLIALAKLS-KIKIISWIAAAYIEIIRGTPLLVQVFIVFF 342 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G +G+ +F+ II+L +N SAYI+EIIR+ I ++ KGQ +A+ +GL QT+++ Sbjct: 343 GTTAALGLDISAFICGIIALIINSSAYIAEIIRAGINAVDKGQTEAAQCLGLNYNQTMKN 402 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 +I+PQ I L +EF++++K +S+ STI + E+ +Q + ++ P A + Sbjct: 403 VIMPQAIKNILPALGNEFVTLIKESSIVSTIGVSEVMFNSQVVQGISFDPFTPLLLAAGL 462 Query: 199 YLILT 203 Y +LT Sbjct: 463 YFVLT 467 >gi|59710614|ref|YP_203390.1| cystine transport system permease protein [Vibrio fischeri ES114] gi|59478715|gb|AAW84502.1| cystine transport system permease protein [Vibrio fischeri ES114] Length = 223 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 65/164 (39%), Positives = 102/164 (62%), Gaps = 3/164 (1%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSII 115 Y+ FRGTPLLVQLF+++YGLP + +F D+F A +I LTL+F+AY++E IR++II Sbjct: 56 QLYISFFRGTPLLVQLFLLYYGLPQVFPIFVGLDAFSAAVIGLTLHFAAYMAESIRAAII 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 I + Q +AS +IG+T Q +R IILPQ + L + FI ++KSTS+A T+ + EI Sbjct: 116 GIDRSQMEASLSIGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIM 175 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 AQ S++++ + +A +Y + +QI E + + Sbjct: 176 AKAQMEASSSFKFFEAFLAVALIYWGVVVILTRVQIWAEEKLNK 219 >gi|295703708|ref|YP_003596783.1| putative amino acid ABC transporter permease [Bacillus megaterium DSM 319] gi|294801367|gb|ADF38433.1| putative amino acid ABC transporter, permease protein [Bacillus megaterium DSM 319] Length = 241 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/224 (36%), Positives = 130/224 (58%), Gaps = 15/224 (6%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 ++ P++L ++ +TL I+ IS + I G FIAV RI+ ++ I YV RGTP Sbjct: 10 LEQTPEVL-KSVPLTLTISIISMALGSIFGLFIAVCRIY-KIPLLKQIAVIYVSFMRGTP 67 Query: 70 LLVQLFVIFYGLP------------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 LLVQL+V FYG+P H+G + +I+ TLN SAY SE+ RSSI + Sbjct: 68 LLVQLYVFFYGIPIFIEFLNQTQGWHLGGDTISPLIYALIAYTLNTSAYQSEVFRSSIQT 127 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ++A+Y+IG+T Q I+ II PQ++ + L + FIS++K+TS+A + + EI Sbjct: 128 IDRGQFEAAYSIGMTTFQAIKRIIFPQSLVAAIPNLGNIFISLIKATSLAFAVKVVEIMA 187 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ I + Y+ L +Y + +Y IL F + + IE ++ + Sbjct: 188 ISKVIANDGYRYLEMYLVASLIYWILCFFFERLFVVIEKKLSHY 231 >gi|254243964|ref|ZP_04937286.1| hypothetical protein PA2G_04794 [Pseudomonas aeruginosa 2192] gi|126197342|gb|EAZ61405.1| hypothetical protein PA2G_04794 [Pseudomonas aeruginosa 2192] Length = 230 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 125/209 (59%), Gaps = 12/209 (5%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EW LI+ P++L A +TL + I+ V L + + + R + + + Y++ Sbjct: 3 EW-ELILKWMPKMLQGA-ALTLELLAIAVVAGLALALPLGIARAS-RHWYVRAVPYAYIF 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSI 114 FRGTPLL+QLF+++YGL V D + ++++TL+ +AYI+EI+R +I Sbjct: 60 FFRGTPLLLQLFIVYYGLAQFEEVRKSAFWPYLRDPYWCALLTMTLHTAAYIAEILRGAI 119 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+P G+ +A+ A+G++R+Q + HIILP+ + S+E I +LK+++V T+T+ +I Sbjct: 120 HSVPVGEVEAARALGMSRRQALWHIILPRAVRIGLPAYSNEVIVMLKASAVVYTVTLFDI 179 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I++ TY+ ++ +C +YL++T Sbjct: 180 MGMARTIIARTYESMLFFCLAGALYLVIT 208 >gi|312862890|ref|ZP_07723130.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] gi|311101750|gb|EFQ59953.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] Length = 213 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 74/211 (35%), Positives = 125/211 (59%), Gaps = 9/211 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRG 67 +++ P LL A VVTL + I V+S+ +G +A +++I F ++ ++ YVWI RG Sbjct: 4 VLEVLPALLNGA-VVTLQVFFIVIVLSIPLGIVLAFLMQIKFKP--LNWLLTLYVWIMRG 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL ++Y LP +GIVFD A I++ TLN++AY +EI R I++IPKGQ++A+ Sbjct: 61 TPLLLQLIFVYYVLPSVGIVFDRLPAAILAFTLNYAAYFAEIFRGGILAIPKGQYEAAKM 120 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TT 185 + L+ QTIR+IILPQ + + +E I+++K +S+ + + ++ ++ + T Sbjct: 121 LKLSSFQTIRYIILPQVVKIVLPSIFNEIINLVKDSSLVYVLGVGDLLLESRTAANRDAT 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 P+ + +YLIL + IE Sbjct: 181 LAPMFVAGA---IYLILVGVVTVASKHIEKK 208 >gi|315657916|ref|ZP_07910790.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus lugdunensis M23590] gi|315496952|gb|EFU85273.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus lugdunensis M23590] Length = 497 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 114/185 (61%), Gaps = 2/185 (1%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 IV T+ ++ I +I ++G IA+ ++ IIS I Y+ I RGTPLLVQ+F++F+ Sbjct: 296 GIVNTIILSAIGVIIGAVLGTLIALAKLS-KIKIISWIAAAYIEIIRGTPLLVQVFIVFF 354 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G +G+ +F+ II+L +N SAYI+EIIR+ I ++ KGQ +A+ +GL QT+++ Sbjct: 355 GTTAALGLDISAFICGIIALIINSSAYIAEIIRAGINAVDKGQTEAAQCLGLNYNQTMKN 414 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 +I+PQ I L +EF++++K +S+ STI + E+ +Q + ++ P A + Sbjct: 415 VIMPQAIKNILPALGNEFVTLIKESSIVSTIGVSEVMFNSQVVQGISFDPFTPLLLAAGL 474 Query: 199 YLILT 203 Y +LT Sbjct: 475 YFVLT 479 >gi|89214060|gb|ABD64372.1| amino acid ABC transporter permease protein 2 [Pseudomonas chlororaphis] Length = 215 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 63/184 (34%), Positives = 109/184 (59%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ ++F+ + G I +RI S Y+ +F+GTPLL+QLF++F+G+ Sbjct: 19 TLLLSLVAFIGGGLYGLLIMTLRIS-KKAFPSHFARLYIELFQGTPLLMQLFLVFFGIAL 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ ++A I+LTL SAY++EI R + SIP GQW+AS ++ L + +RH+ILPQ Sbjct: 78 LGVDISPWLAAAIALTLFTSAYLAEIWRGCVDSIPNGQWEASSSLALNPYEQLRHVILPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T+V S I + E+ +T + + T++P ++Y +A Y +L Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGLTELTKTGGMLANATFEPFMVYGLVALGYFLL- 196 Query: 204 SFCY 207 CY Sbjct: 197 --CY 198 >gi|315303607|ref|ZP_07874151.1| probable amino-acid ABC transporter permease protein YckA [Listeria ivanovii FSL F6-596] gi|313628027|gb|EFR96616.1| probable amino-acid ABC transporter permease protein YckA [Listeria ivanovii FSL F6-596] Length = 213 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 125/212 (58%), Gaps = 7/212 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + I++ P LL + TL + ++ V S+ +G +AV + + I++ Y+WI R Sbjct: 2 DYIMEILPALL-DGVKTTLLVFAVTLVCSIPLGAVVAVGNVS-KIAPLKFILNIYIWIMR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL I+YGLP IGIVFD A+ ++ LN++AY +EI R +SI GQ++++ Sbjct: 60 GTPLLLQLIFIYYGLPIIGIVFDRMDAVFLAFILNYAAYFAEIFRGGFLSIESGQYESAK 119 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--T 184 +GLT QT+R I+LPQ + + +E I+++K +S+ + I ++ + + +S Sbjct: 120 VLGLTYAQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDV 179 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 T PL++ +A +YL LT+ ++ ++E Sbjct: 180 TLIPLVL---VAAIYLALTAILTVLFKQLEKR 208 >gi|237806947|ref|YP_002891387.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] gi|237499208|gb|ACQ91801.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] Length = 262 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 62/156 (39%), Positives = 100/156 (64%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FY FRGTPLL+Q+ +I+ GLP IG + + + II+L L + AY+SEI RS+I++IP+ Sbjct: 99 FYTSFFRGTPLLLQVLLIYQGLPQIGPIPTAIPSGIIALALCYGAYLSEIFRSAIVAIPR 158 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A+ A+GL + QT +ILPQ++ + P + FI++LK +S+ S + + EI AQ Sbjct: 159 GQWEAAMALGLKKHQTFLKVILPQSMKVAIPPGMAMFIAMLKDSSLVSVMGLWEIMFLAQ 218 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + Y+ + + A +Y IL+ +IQ ++E Sbjct: 219 SYGRSAYRYMEMLITAAVIYWILSFLLELIQARLEK 254 >gi|307300763|ref|ZP_07580538.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|306904297|gb|EFN34882.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 218 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 122/204 (59%), Gaps = 3/204 (1%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFVI 77 AA T+ ++ I+F + G +A++R+ S+T + L ++ +F+GTPLL+QLF++ Sbjct: 15 AAAQWTIALSAIAFAGGSVGGLLMALMRV--SETRALRLFATGFIRVFQGTPLLMQLFLV 72 Query: 78 FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 F+G+ G + ++A I+L L+ SA++ EI R I ++PKGQ +A+ A+GL +++R Sbjct: 73 FFGMNIFGFAINPWIAATIALALHASAFLGEIWRGCIEAVPKGQREAATALGLRYFRSMR 132 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 H+ILPQ + P + ++K TS+AS I E+ + Q I + T+ P +++ +A Sbjct: 133 HVILPQAARIAVAPTVGFLVQLIKGTSLASIIGFTELTRQGQIINNATFSPFLVFGTVAA 192 Query: 198 VYLILTSFCYIIQIKIESSVTQHT 221 VY +L +I ++E+ ++ T Sbjct: 193 VYFLLCWPLSLIARRMETRFSRAT 216 >gi|300173515|ref|YP_003772681.1| amino acid ABC transporter [Leuconostoc gasicomitatum LMG 18811] gi|299887894|emb|CBL91862.1| Amino acid ABC transporter [Leuconostoc gasicomitatum LMG 18811] Length = 491 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 117/193 (60%), Gaps = 3/193 (1%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + L ++TL +A I+ VI ++G +A+ ++ + I+ + + Y+ RGTPLL Sbjct: 282 KYGNLFIKGTLITLALAAIAVVIGAVLGTVLALFKLS-PNFILKSLGNIYIEYVRGTPLL 340 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 VQ F++F+G IG+ +F A +++ LN +AY++EIIRS I S+ GQ +A+ ++GL+ Sbjct: 341 VQAFMVFFGTQVIGLNLSAFAAGALAMGLNSAAYVAEIIRSGINSVNYGQTEAARSLGLS 400 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVSTTYQPLI 190 + +++R+IILPQ I L +EF++++K SV S I + E+ FQT + ++QP Sbjct: 401 KGKSMRYIILPQAIKNILPALGNEFVTVIKEGSVVSVIGVGELMFQTG-VVQGASFQPFF 459 Query: 191 IYCELAFVYLILT 203 + +Y +LT Sbjct: 460 PLLITSLIYFVLT 472 >gi|15600348|ref|NP_253842.1| amino acid (lysine/arginine/ornithine/histidine/octopine) ABC transporter membrane protein [Pseudomonas aeruginosa PAO1] gi|107104255|ref|ZP_01368173.1| hypothetical protein PaerPA_01005329 [Pseudomonas aeruginosa PACS2] gi|116053302|ref|YP_793626.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|218894255|ref|YP_002443124.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254238142|ref|ZP_04931465.1| hypothetical protein PACG_04264 [Pseudomonas aeruginosa C3719] gi|296392009|ref|ZP_06881484.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1] gi|313110216|ref|ZP_07796113.1| amino acid (lysine/arginine/ornithine/histidine/octopine) ABC transporter membrane protein [Pseudomonas aeruginosa 39016] gi|9951456|gb|AAG08540.1|AE004928_6 amino acid (lysine/arginine/ornithine/histidine/octopine) ABC transporter membrane protein [Pseudomonas aeruginosa PAO1] gi|115588523|gb|ABJ14538.1| putative amino acid ABC transporter, permease protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126170073|gb|EAZ55584.1| hypothetical protein PACG_04264 [Pseudomonas aeruginosa C3719] gi|218774483|emb|CAW30300.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|310882615|gb|EFQ41209.1| amino acid (lysine/arginine/ornithine/histidine/octopine) ABC transporter membrane protein [Pseudomonas aeruginosa 39016] Length = 230 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 125/209 (59%), Gaps = 12/209 (5%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EW LI+ P++L A +TL + I+ V L + + + R + + + Y++ Sbjct: 3 EW-ELILKWMPKMLQGA-ALTLELLAIAVVAGLALALPLGIARAS-RHWYVRAVPYAYIF 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSI 114 FRGTPLL+QLF+++YGL V D + ++++TL+ +AYI+EI+R +I Sbjct: 60 FFRGTPLLLQLFIVYYGLAQFEEVRKSAFWPYLRDPYWCALLTMTLHTAAYIAEILRGAI 119 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+P G+ +A+ A+G++R+Q + HIILP+ + S+E I +LK+++V T+T+ +I Sbjct: 120 HSVPVGEVEAARALGMSRRQALWHIILPRAVRIGLPAYSNEVILMLKASAVVYTVTLFDI 179 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I++ TY+ ++ +C +YL++T Sbjct: 180 MGMARTIIARTYESMLFFCLAGALYLVIT 208 >gi|170745094|ref|YP_001766551.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium radiotolerans JCM 2831] gi|170658695|gb|ACB27749.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium radiotolerans JCM 2831] Length = 227 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/204 (35%), Positives = 120/204 (58%), Gaps = 7/204 (3%) Query: 5 WFNL---IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-IRIFFSDTIISLIMHF 60 W L ++ P L A +VV L + S ++S + G A+ R F+ + F Sbjct: 10 WLTLSDEVVTYGPGFLSATLVV-LGVTVASILVSWVCGLLGALGKRSSFAP--FRALASF 66 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YVW RGTP L+Q+F++++G+P IG+ A II+L ++ AY++E IR+ + +IP+G Sbjct: 67 YVWFIRGTPTLIQVFIVYFGMPQIGVKLSPVTAGIIALGVSSGAYVAETIRAGLAAIPRG 126 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ A+G+ + + I+LPQ L++E IS +K+TS+ STIT+ E+ AQ Sbjct: 127 QVESALALGMNPRIMMVRIVLPQVFRMILPSLTNEAISAVKNTSLLSTITVVELTLYAQL 186 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +++TT++P Y A +YL LTS Sbjct: 187 MIATTFRPFDFYIAAALIYLGLTS 210 >gi|146340447|ref|YP_001205495.1| amino acid ABC transporter membrane protein [Bradyrhizobium sp. ORS278] gi|146193253|emb|CAL77269.1| putative amino acid transport protein (ABC superfamily, membrane) [Bradyrhizobium sp. ORS278] Length = 222 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 114/200 (57%), Gaps = 2/200 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y W I+ + L + + T+ + ++ IIG + +IR+ +I ++ Sbjct: 1 MNYTWDFAILGKYSHLFWVGLGWTMAYTLGTVLLGTIIGLLVGIIRLR-RPVVIDWLLIA 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ +FR TPLLVQ+ +Y P IGI + VA + L+L A+ +EIIR SI S+P+ Sbjct: 60 YIELFRCTPLLVQIIWFYYAFPVVIGINIPAHVAAVTVLSLYGGAFYAEIIRGSIESVPR 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQWDA+ A+GL + +R +ILPQ + P ++ ++ LK+TS+ S I +P++ A Sbjct: 120 GQWDAARALGLRPWRMMRLVILPQALKPMLAPYVNQSVTQLKNTSLVSVIAVPDLVYNAT 179 Query: 180 RIVSTTYQPLIIYCELAFVY 199 I + TY+PL +Y +A +Y Sbjct: 180 LINADTYRPLEVYTIIAIIY 199 >gi|312863976|ref|ZP_07724212.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] gi|311100389|gb|EFQ58596.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] Length = 515 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 75/226 (33%), Positives = 122/226 (53%), Gaps = 11/226 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF--FSDTIISLIMHFYVWI- 64 +I ++PQ L +TL I+ I V+ IG I V R ++ ++L+ + W+ Sbjct: 286 IIAKNWPQFLRG-TGITLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKLFGWVL 344 Query: 65 ------FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 FRGTP++VQ VI+YG GI D +A + +++N AY+SEI+R I ++ Sbjct: 345 NVYIEVFRGTPMIVQSMVIYYGTAQAFGINIDRTLAAVFIVSINTGAYMSEIVRGGIFAV 404 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G T QT+R I+LPQ I +EF+ +K TSV + I++ E++ Sbjct: 405 DKGQFEAATALGFTHGQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVVELYFA 464 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + S TYQ + +A +Y +LT I +E + Q TY+ Sbjct: 465 GNTVASQTYQYFQTFFVIAAIYFVLTFTVTRILRYVERRLDQDTYT 510 >gi|222153290|ref|YP_002562467.1| glutamine ABC transporter glutamine-binding protein/permease [Streptococcus uberis 0140J] gi|222114103|emb|CAR42546.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus uberis 0140J] Length = 724 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 123/214 (57%), Gaps = 9/214 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 LI +++ QLL A + TL + ISF I++IIG ++ + S + + +V + RG Sbjct: 509 LISNNYKQLL-AGLCTTLSLTLISFAIAMIIGIIFGMMAVSPSKGM-RIASSIFVDVVRG 566 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ IF+G+P++ + F+A I+L+LN AYI+EI+R I +IP G Sbjct: 567 IPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGGAYIAEIVRGGIEAIPAG 626 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G+ + T++ IILPQ + ++F+ LK T++ S I + E+FQT + Sbjct: 627 QMEASRSLGIPYRVTMKKIILPQAVKVMLPNFINQFVISLKDTTIVSAIGLVELFQTGKI 686 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I++ YQ +Y LA +YLI+ + + ++E Sbjct: 687 IIARNYQSFRMYAILAIIYLIMITLLTRLAKRLE 720 >gi|27381500|ref|NP_773029.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27354668|dbj|BAC51654.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 218 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 62/173 (35%), Positives = 105/173 (60%), Gaps = 1/173 (0%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 ++FV G +A++R ++ I Y+ IF+GTPLL+QLFV++YGL G+ D Sbjct: 26 VAFVGGCTAGLAVALLRTCGHRSV-EWITRIYIGIFQGTPLLLQLFVVYYGLALTGLKLD 84 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 +FVA+ I T+N SA++ EI R +I ++P+GQ +A+ A+GL +R I+LPQ I S Sbjct: 85 AFVAVAIGFTVNASAFLGEIWRGAIQAVPRGQTEAAMALGLHYSSRMRDIVLPQAIRISL 144 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + ++K TS+A+ + E+ + Q + + T+QPL+++ + +Y IL Sbjct: 145 PATIGYLVQLIKGTSLAAIVGFIELARAGQIVSNQTFQPLLVFGVVGAMYFIL 197 >gi|228476498|ref|ZP_04061188.1| ABC transporter, permease protein [Streptococcus salivarius SK126] gi|228251919|gb|EEK10965.1| ABC transporter, permease protein [Streptococcus salivarius SK126] Length = 515 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 75/226 (33%), Positives = 122/226 (53%), Gaps = 11/226 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF--FSDTIISLIMHFYVWI- 64 +I ++PQ L +TL I+ I V+ IG I V R ++ ++L+ + W+ Sbjct: 286 IIAKNWPQFLRG-TGITLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKLFGWVL 344 Query: 65 ------FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 FRGTP++VQ VI+YG GI D +A + +++N AY+SEI+R I ++ Sbjct: 345 NVYIEVFRGTPMIVQSMVIYYGTAQAFGINIDRTLAAVFIVSINTGAYMSEIVRGGIFAV 404 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G T QT+R I+LPQ I +EF+ +K TSV + I++ E++ Sbjct: 405 DKGQFEAATALGFTHGQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVVELYFA 464 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + S TYQ + +A +Y +LT I +E + Q TY+ Sbjct: 465 GNTVASQTYQYFQTFFVIAAIYFVLTFTVTRILRYVERRLDQDTYT 510 >gi|315037358|ref|YP_004030926.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1112] gi|325955825|ref|YP_004286435.1| glutamine ABC transporter [Lactobacillus acidophilus 30SC] gi|312275491|gb|ADQ58131.1| putative glutamine ABC transporter [Lactobacillus amylovorus GRL 1112] gi|325332390|gb|ADZ06298.1| glutamine ABC transporter [Lactobacillus acidophilus 30SC] Length = 537 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 119/212 (56%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-------- 53 K W + ++ + I +TL +A + ++ IG + ++R + T Sbjct: 287 KENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTRGKRWALN 346 Query: 54 -ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 + ++ YV IFRGTP++VQ VI+YG+ + + VA +I +++N AY++E+IR Sbjct: 347 FVKWLLSVYVEIFRGTPMMVQAAVIYYGIAQFWHLNLNRTVAALIIVSINTGAYLAEVIR 406 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 IIS P+GQ++A+ A+G+T Q + HIILPQ I +++EFI +K TSV S I++ Sbjct: 407 GGIISTPEGQFEAASALGMTHNQRMWHIILPQAIRNCLPSITNEFIVNIKDTSVLSIISV 466 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F I S +++ Y ++ +YLILT Sbjct: 467 SELFFVGTTIASQSFKFFPTYLMISAIYLILT 498 >gi|327182662|gb|AEA31109.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1118] Length = 537 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 119/212 (56%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-------- 53 K W + ++ + I +TL +A + ++ IG + ++R + T Sbjct: 287 KENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTRGKRWALN 346 Query: 54 -ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 + ++ YV IFRGTP++VQ VI+YG+ + + VA +I +++N AY++E+IR Sbjct: 347 FVKWLLSVYVEIFRGTPMMVQAAVIYYGIAQFWHLNLNRTVAALIIVSINTGAYLAEVIR 406 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 IIS P+GQ++A+ A+G+T Q + HIILPQ I +++EFI +K TSV S I++ Sbjct: 407 GGIISTPEGQFEAASALGMTHNQRMWHIILPQAIRNCLPSITNEFIVNIKDTSVLSIISV 466 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F I S +++ Y ++ +YLILT Sbjct: 467 SELFFVGTTIASQSFKFFPTYLMISAIYLILT 498 >gi|322516947|ref|ZP_08069840.1| polar amino acid uptake ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] gi|322124492|gb|EFX95983.1| polar amino acid uptake ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] Length = 213 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 125/211 (59%), Gaps = 9/211 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRG 67 +++ P LL A VVTL + I V+S+ +G +A +++I F ++ ++ YVWI RG Sbjct: 4 VLEVLPALLNGA-VVTLQVFFIVIVLSIPLGIVLAFLMQIKFKP--LNWLLTLYVWIMRG 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL ++Y LP +GIVFD A I++ TLN++AY +EI R I++IPKGQ++A+ Sbjct: 61 TPLLLQLIFVYYVLPSVGIVFDRLPAAILAFTLNYAAYFAEIFRGGILAIPKGQYEAAKM 120 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TT 185 + L+ QTIR+IILPQ + + +E I+++K +S+ + + ++ ++ + T Sbjct: 121 LKLSSFQTIRYIILPQVVKIVLPSIFNEIINLVKDSSLVYVLGVGDLLLESRTAANRDAT 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 P+ + +YL+L + IE Sbjct: 181 LAPMFVAGA---IYLVLVGVVTVASKHIEKK 208 >gi|226311780|ref|YP_002771674.1| amino acid ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226094728|dbj|BAH43170.1| amino acid ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 221 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 67/192 (34%), Positives = 120/192 (62%), Gaps = 3/192 (1%) Query: 21 IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG 80 +++T + S ++ IIG F+A++++ + I + Y+ I RGTPL+VQ+FV+++G Sbjct: 22 LLLTFQLTIASVIVGSIIGLFVALLKVS-KLPVARFIANAYIMIIRGTPLVVQIFVLYFG 80 Query: 81 LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 + I F + ++L ++ AYI+EI R SI SI KGQ +A ++G++ +QT+R II Sbjct: 81 FYKV-IDLGQFWSAALALAIHSGAYIAEIFRGSIQSIDKGQMEAGLSLGMSARQTMRRII 139 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LPQ + S PL ++FI LK +S+A+ I + E+F A+R+ + T+ + + +A YL Sbjct: 140 LPQAMKRSIPPLGNQFILSLKESSLAAFIAMDELFSLARRLSAETFDEMTYFLIVALYYL 199 Query: 201 -ILTSFCYIIQI 211 I+ +F +++ I Sbjct: 200 VIVMAFTFVVHI 211 >gi|55820917|ref|YP_139359.1| polar amino acid ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55822837|ref|YP_141278.1| amino acid (glutamine) ABC transporter permease [Streptococcus thermophilus CNRZ1066] gi|55736902|gb|AAV60544.1| polar amino acid ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55738822|gb|AAV62463.1| amino acid (glutamine) ABC transporter, permease protein [Streptococcus thermophilus CNRZ1066] Length = 213 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 125/211 (59%), Gaps = 9/211 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRG 67 +++ P LL A VVTL + I ++S+ +G +A +++I F ++ ++ YVWI RG Sbjct: 4 VLEVLPALLNGA-VVTLQVFFIVIILSIPLGIVLAFLMQIKFKP--LNWLLTLYVWIMRG 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL ++Y LP +GIVFD A I++ TLN++AY +EI R I++IPKGQ++A+ Sbjct: 61 TPLLLQLIFVYYVLPSVGIVFDRLPAAILAFTLNYAAYFAEIFRGGILAIPKGQYEAAKM 120 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TT 185 + L+ QTIR+IILPQ + + +E I+++K +S+ + + ++ ++ + T Sbjct: 121 LKLSPFQTIRYIILPQVVKIVLPSIFNEIINLVKDSSLVYVLGVGDLLLESRTAANRDAT 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 P+ + +YLIL + IE Sbjct: 181 LAPMFVAGA---IYLILVGVVTVASKNIEKK 208 >gi|325689080|gb|EGD31088.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK115] Length = 521 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 116/206 (56%), Gaps = 11/206 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---------DTIISLIM 58 ++ +++PQ L A +TL I+ + LIIG I V R + I + Sbjct: 284 ILAENWPQFLRGA-GLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFL 342 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ Sbjct: 343 NVYIEIFRGTPMIVQSMVIYYGTAQAFGISIDRTIAAIFIVSINTGAYMSEIVRGGIFAV 402 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 403 DKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFS 462 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 I + TYQ + +A +Y ILT Sbjct: 463 GNTIATQTYQYFQTFTIIAVIYFILT 488 >gi|194290844|ref|YP_002006751.1| binding-protein-dependent transporter inner membrane component [Cupriavidus taiwanensis LMG 19424] gi|193224679|emb|CAQ70690.1| putative Binding-protein-dependent transporter, inner membrane component [Cupriavidus taiwanensis LMG 19424] Length = 217 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 123/203 (60%), Gaps = 9/203 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + I+ +S+ +G +A+ RI S ++S +++ Y+W+ RGTPL++Q+ I++ LP Sbjct: 17 VTLTLFAITLALSVPLGLALALARIS-SWPLLSGLVNGYIWLMRGTPLMLQMLFIYFALP 75 Query: 83 H---IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 IG+ F A +++ LN++AY +EI R+ I S+ +GQ++AS A+G+T QT+R + Sbjct: 76 FVPVIGVRLPDFPAAVVAFALNYAAYFAEIFRAGIKSVDRGQYEASKALGMTYFQTMRRV 135 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST--TYQPLIIYCELAF 197 +LPQ ++ P+S+E I+++K TS+ + + +I +TA+ IV T P ++ A Sbjct: 136 VLPQMVSRVLPPVSNETITLIKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVA---AL 192 Query: 198 VYLILTSFCYIIQIKIESSVTQH 220 YL++T +E +H Sbjct: 193 FYLVMTLILTWFFQNLEKRYAKH 215 >gi|158424240|ref|YP_001525532.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158331129|dbj|BAF88614.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 234 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 117/202 (57%), Gaps = 1/202 (0%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 Y++ +I ++ L + +++T+ ++ S V+ L +G +A +R + +I I+ Y Sbjct: 4 NYQFQFGVIANYRDELLSGLLLTIQLSVSSIVLGLALGIMLASVRAMYGG-LIGRIIKLY 62 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V + R TP LVQLF+IF+GLP +G+ D+ A +I +T+N AY +EIIR+ I ++ + Q Sbjct: 63 VEVVRNTPFLVQLFIIFFGLPVLGVRVDATAAALIGMTINLGAYTTEIIRAGIDAVHRSQ 122 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A ++G+T Q RHII+P I L S+FI + ++SV S I+ E+ +I Sbjct: 123 VEAGQSLGMTTYQIYRHIIIPPAIAKVYPALCSQFILMTLASSVCSAISAEELSSVTAQI 182 Query: 182 VSTTYQPLIIYCELAFVYLILT 203 S +Y+ +Y +YL L+ Sbjct: 183 ESQSYRSFEVYVIATLIYLALS 204 >gi|229494909|ref|ZP_04388660.1| glutamine ABC transporter, permease/substrate-binding protein [Rhodococcus erythropolis SK121] gi|229318133|gb|EEN84003.1| glutamine ABC transporter, permease/substrate-binding protein [Rhodococcus erythropolis SK121] Length = 482 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 128/214 (59%), Gaps = 3/214 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 LI ++PQLL + +T+ ++ +S I+L++G + R+ ++ + I YV IFR Sbjct: 271 GLIKSTYPQLL-KGLWLTIVLSVVSIAIALVLGAIFGLCRVS-TNMFVRGIGTTYVDIFR 328 Query: 67 GTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 GTPLLVQ F I++G+P + +F A II+L+LN AY++EI+R I+S+ KGQ +AS Sbjct: 329 GTPLLVQAFFIYFGIPAALHFQMSAFTAGIITLSLNAGAYMAEIVRGGILSVDKGQMEAS 388 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G++ +++R +I+PQ I T ++F+ LK TS+ S I + E+ QT + I++ Sbjct: 389 RSLGISYMKSMRKVIMPQAIRTMIPSYINQFVITLKDTSILSVIGLAELTQTGRIIIARN 448 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 +Q ++ + +Y I+ + ++E + + Sbjct: 449 FQSFNMWLIIGVMYFIIIMALTKLSNRLEKRINK 482 >gi|212695841|ref|ZP_03303969.1| hypothetical protein ANHYDRO_00374 [Anaerococcus hydrogenalis DSM 7454] gi|212677166|gb|EEB36773.1| hypothetical protein ANHYDRO_00374 [Anaerococcus hydrogenalis DSM 7454] Length = 455 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 117/204 (57%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-----------IISLIMHF 60 + L I TL I+ IS +I IG +AVIR D II+ I+ Sbjct: 222 EYSSLFINGIFSTLFISIISTIIGFFIGLVVAVIRKTNVDKNKNIVGYVLQKIINFILAA 281 Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ IFRGTP++VQ +IFYG + I + +A I +++N AY+SE++R I S+ + Sbjct: 282 YIEIFRGTPMMVQAILIFYGAKQFLAIDMSTMLAAFIIVSINTGAYLSEVVRGGINSVDE 341 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A A+G+T QT+ ++++PQTI + +++EF+ +K TSV + I++ E+F ++ Sbjct: 342 GQFEACKALGMTHSQTMFNVVIPQTIKSILPAIANEFVVNIKDTSVLNVISVTELFFVSK 401 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I +TYQ Y A +Y ILT Sbjct: 402 SIAGSTYQIFQTYLITAIIYFILT 425 >gi|255310930|ref|ZP_05353500.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis 6276] gi|255317230|ref|ZP_05358476.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis 6276s] Length = 214 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 117/205 (57%), Gaps = 3/205 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIR-IFFSDTIISLIMHFYVWIFRGTPLLVQ 73 +LL TL I IS V ++G+ I + +F I + +FYV RGTPL +Q Sbjct: 9 KLLLRGCGYTLLITAISLVCGFVLGWGIGTVNSRYFPCRISKFLGNFYVVAVRGTPLFIQ 68 Query: 74 LFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 + ++++GLP I + VA +I+LTLN +AY++E +R+ I ++P QW+A+ +G T Sbjct: 69 ILIVYFGLPSLIKVNLSPLVAGLIALTLNSAAYLAENVRAGINALPVQQWEAAKVLGYTG 128 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 Q HI+ PQ L++EF+S++K +S+ + +PE+ + + IV+ P+ +Y Sbjct: 129 PQIFLHILCPQVFKNILPSLTNEFVSLIKESSILMVVGVPELTKVTKDIVARELNPMEMY 188 Query: 193 CELAFVYLILTS-FCYIIQIKIESS 216 A +YLI+TS F Y ++ + S Sbjct: 189 LICAGLYLIMTSAFSYFARLSEKES 213 >gi|228477605|ref|ZP_04062238.1| ABC transporter, permease protein [Streptococcus salivarius SK126] gi|228250749|gb|EEK09947.1| ABC transporter, permease protein [Streptococcus salivarius SK126] Length = 213 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 74/211 (35%), Positives = 125/211 (59%), Gaps = 9/211 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRG 67 +++ P LL A VVTL + I V+S+ +G +A +++I F ++ ++ YVWI RG Sbjct: 4 VLEVLPALLNGA-VVTLQVFFIVIVLSIPLGIVLAFLMQIKFKP--LNWLLTLYVWIMRG 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL ++Y LP +GIVFD A I++ TLN++AY +EI R I++IPKGQ++A+ Sbjct: 61 TPLLLQLIFVYYVLPSVGIVFDRLPAAILAFTLNYAAYFAEIFRGGILAIPKGQYEAAKM 120 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TT 185 + L+ QTIR+IILPQ + + +E I+++K +S+ + + ++ ++ + T Sbjct: 121 LKLSPFQTIRYIILPQVVKIVLPSIFNEIINLVKDSSLVYVLGVGDLLLESRTAANRDAT 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 P+ + +YLIL + IE Sbjct: 181 LAPMFVAGA---IYLILVGVVTVASKHIEKK 208 >gi|226307850|ref|YP_002767810.1| glutamine ABC transporter glutamine-binding/permease protein [Rhodococcus erythropolis PR4] gi|226186967|dbj|BAH35071.1| putative glutamine ABC transporter glutamine-binding/permease protein [Rhodococcus erythropolis PR4] Length = 482 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 128/214 (59%), Gaps = 3/214 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 LI ++PQLL + +T+ ++ +S I+L++G + R+ ++ + I YV IFR Sbjct: 271 GLIKSTYPQLL-KGLWLTIVLSVVSIAIALVLGAIFGLCRVS-TNMFVRGIGTTYVDIFR 328 Query: 67 GTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 GTPLLVQ F I++G+P + +F A II+L+LN AY++EI+R I+S+ KGQ +AS Sbjct: 329 GTPLLVQAFFIYFGIPAALHFQMSAFTAGIITLSLNAGAYMAEIVRGGILSVDKGQMEAS 388 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G++ +++R +I+PQ I T ++F+ LK TS+ S I + E+ QT + I++ Sbjct: 389 RSLGISYMKSMRKVIMPQAIRTMIPSYINQFVITLKDTSILSVIGLAELTQTGRIIIARN 448 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 +Q ++ + +Y I+ + ++E + + Sbjct: 449 FQSFNMWLIIGVMYFIIIMALTKLSNRLEKRINK 482 >gi|229028441|ref|ZP_04184563.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1271] gi|228732890|gb|EEL83750.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1271] Length = 214 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 105/163 (64%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + ++S ++ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILR-YMKIPVVSQVLGIIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP +G+ + A+I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEVGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVGISLPELMHNAQ 176 >gi|218135088|ref|ZP_03463892.1| hypothetical protein BACPEC_02993 [Bacteroides pectinophilus ATCC 43243] gi|217990473|gb|EEC56484.1| hypothetical protein BACPEC_02993 [Bacteroides pectinophilus ATCC 43243] Length = 508 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 119/205 (58%), Gaps = 15/205 (7%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD----TIISLIMHFYV 62 N + DS + L + TL I + +I +++GF IA++R TI++ I Y+ Sbjct: 290 NFVKDSRWEYLIKGLGNTLLITLFAIIIGIVLGFLIAIVRTNHDKNGGLTILNAICKVYL 349 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDS-----FVAIIISLTLNFSAYISEIIRSSIISI 117 I RGTP++VQL +I+Y ++F S + +I+ LN +AY++E++RS I+++ Sbjct: 350 TIVRGTPVMVQLLIIYY------VIFASVNTSKILVAVIAFGLNSAAYVAEVVRSGIMAV 403 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQ++A ++GL QT++ IILPQ + L +EFIS+LK TS++ I + ++ + Sbjct: 404 DNGQFEAGRSLGLNYSQTMKSIILPQAVKNILPALGNEFISLLKETSISGYIGLMDLTKG 463 Query: 178 AQRIVSTTYQPLIIYCELAFVYLIL 202 I S TY+P + +A +YL++ Sbjct: 464 GDIIRSITYEPFMPLIAVAIIYLVI 488 >gi|186471432|ref|YP_001862750.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184197741|gb|ACC75704.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 215 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 105/183 (57%), Gaps = 1/183 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +V TL ++ S V +IG AV+R F + + Y +FRGTP+L+ L I++ Sbjct: 16 GLVATLLLSAASIVGGTLIGLLAAVLR-SFGPWGSARVAKLYTELFRGTPVLITLMFIYF 74 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G+ + G D F A ++ L++ AYI+E+ RS I ++PKGQW+ S +GL + QT + Sbjct: 75 GVSYFGYAIDVFAAGVVGLSVYQGAYIAEVFRSGIEAVPKGQWEVSQILGLGKMQTFFSV 134 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQT PL +++S++K TS+ S I + E+ Q IV +P+ IY +A +Y Sbjct: 135 VLPQTGKIVLPPLIGQYLSLIKDTSIVSMIGMSELMHGGQAIVDRVGKPVEIYGLVAILY 194 Query: 200 LIL 202 ++ Sbjct: 195 FVV 197 >gi|152984787|ref|YP_001351211.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150959945|gb|ABR81970.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 230 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 125/209 (59%), Gaps = 12/209 (5%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EW LI+ P++L A +TL + I+ V L + + + R + + + Y++ Sbjct: 3 EW-ELILKWMPKMLQGA-ALTLELLAIAVVAGLALALPLGIARAS-RHWYVRALPYAYIF 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSI 114 FRGTPLL+QLF+++YGL V D + ++++TL+ +AYI+EI+R +I Sbjct: 60 FFRGTPLLLQLFIVYYGLAQFEEVRKSAFWPYLRDPYWCALLTMTLHTAAYIAEILRGAI 119 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+P G+ +A+ A+G++R+Q + HIILP+ + S+E I +LK+++V T+T+ +I Sbjct: 120 HSVPVGEVEAARALGMSRRQALWHIILPRAVRIGLPAYSNEVILMLKASAVVYTVTLFDI 179 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I++ TY+ ++ +C +YL++T Sbjct: 180 MGMARTIIARTYESMLFFCLAGALYLVIT 208 >gi|303254039|ref|ZP_07340157.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS455] gi|302599019|gb|EFL66047.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS455] Length = 227 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/227 (32%), Positives = 121/227 (53%), Gaps = 19/227 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM---HFYV 62 F+ + P Y A+V L C+ F +G + V+ F + ++ + YV Sbjct: 3 FSFLPKYLPYFNYGAVVTVLISICVVF-----LGTILGVVLAFGQRSKFKPLVWLANLYV 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 WIFRGTP++VQ+ + F L HI G+ + I+ +++N AY+SE +R+ Sbjct: 58 WIFRGTPMMVQIMIAF-ALMHINAPTIQVGILGVDLSRLIPGILIISMNSGAYVSETVRA 116 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++PKGQ +A+Y++G+ K +R++ILPQ + L +EFI+I+K +S+ S I + Sbjct: 117 GINAVPKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVM 176 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 E++ A + +TTY PL AF YLI+TS + E + Q Sbjct: 177 ELWNGATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQ 223 >gi|55820257|ref|YP_138699.1| polar amino acid ABC uptake transporter substrate binding protein/membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55822147|ref|YP_140588.1| amino acid (glutamine) ABC transporter substrate binding protein/permease [Streptococcus thermophilus CNRZ1066] gi|55736242|gb|AAV59884.1| polar amino acid ABC uptake transporter substrate binding protein/membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55738132|gb|AAV61773.1| amino acid (glutamine) ABC transporter substrate binding protein/permease protein [Streptococcus thermophilus CNRZ1066] Length = 516 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 75/226 (33%), Positives = 122/226 (53%), Gaps = 11/226 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF--FSDTIISLIMHFYVW-- 63 +I ++PQ L +TL I+ I V+ IG I V R ++ ++L+ + W Sbjct: 286 IIAKNWPQFLRG-TAITLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKIFGWFL 344 Query: 64 -----IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 +FRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ Sbjct: 345 NVYIEVFRGTPMIVQSMVIYYGTAQAFGINIDRTLAAIFIVSINTGAYMSEIVRGGIFAV 404 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G T QT+R I+LPQ I +EF+ +K TSV + I++ E++ Sbjct: 405 DKGQFEAATALGFTHGQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVVELYFA 464 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + + TYQ + +A +Y +LT I +E + Q TY+ Sbjct: 465 GNTVATQTYQYFQTFFVIAAIYFVLTFTVTRILRYVERRLDQDTYT 510 >gi|325507519|gb|ADZ19155.1| Glutamine-binding periplasmic protein fused to glutamine permease [Clostridium acetobutylicum EA 2018] Length = 489 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/217 (37%), Positives = 125/217 (57%), Gaps = 9/217 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---DTIISLIM 58 K E NL+ PQLL + +TL I VI++II FI I FFS +++ + Sbjct: 273 KPEQDNLVKQYAPQLL-KGLGMTLFIT----VIAMIIALFIGAIFGFFSISTSKVLNTLA 327 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 ++V I RGTPLLVQ F IF+G+P + G+ + VA II+++LN AY+SEI R I+SI Sbjct: 328 RWFVDIIRGTPLLVQAFFIFFGIPGLSGLKINPVVAGIIAVSLNAGAYMSEIFRGGILSI 387 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 +GQ +A+ ++G+ + + I+ PQ + + ++FI LK TS+ S I I E+ T Sbjct: 388 NQGQMEAARSLGIPYRTAMLKIVFPQAVKVMIPSIVNQFIISLKDTSILSVIGIQELTNT 447 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Q I+ T++ I+ +A +Y I+ I+ KIE Sbjct: 448 GQIIIGATFKAFQIWLIVAIMYFIVIKLLSILSRKIE 484 >gi|309799568|ref|ZP_07693796.1| amino acid ABC transporter, permease protein [Streptococcus infantis SK1302] gi|308116806|gb|EFO54254.1| amino acid ABC transporter, permease protein [Streptococcus infantis SK1302] Length = 227 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 64/177 (36%), Positives = 105/177 (59%), Gaps = 11/177 (6%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFS 103 ++ + + Y+WIFRGTP++VQ+ + F L HI G+ F + II +++N Sbjct: 49 LAWLANVYIWIFRGTPMMVQIMIAF-ALMHINAPTIQIGVLGVDFSRLIPGIIIISMNSG 107 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AY+SE +R+ I ++PKGQ +A+Y++G+ K +R++ILPQ I L +EFI+I+K + Sbjct: 108 AYVSETVRAGINAVPKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDS 167 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S+ S I + E++ A + +TTY PL AF YLI+TS + E+ + Q Sbjct: 168 SLLSAIGVMELWNGATTVSTTTYLPLTPLLFAAFYYLIMTSILTLALKAFENRMGQG 224 >gi|228906126|ref|ZP_04070015.1| Amino acid ABC transproter, permease [Bacillus thuringiensis IBL 200] gi|228853535|gb|EEM98303.1| Amino acid ABC transproter, permease [Bacillus thuringiensis IBL 200] Length = 230 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 76/225 (33%), Positives = 131/225 (58%), Gaps = 8/225 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + I S+P LL A IV TL + S V+ +IG A RI ++ +++ I H Y+ I Sbjct: 2 FEIFISSYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-NNKVLNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGN 178 Query: 186 YQPLIIYCELAFVYLIL----TSFCYIIQIKIESSVTQHTYSVDK 226 +Q L Y + YL+L T F +++ +++ T +++ V K Sbjct: 179 FQQLDTYIIVGAYYLVLVLLFTYFVNLLEKRLQRKET-NSFQVHK 222 >gi|261420863|ref|YP_003254545.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. Y412MC61] gi|319768534|ref|YP_004134035.1| polar amino acid ABC transporter inner membrane protein [Geobacillus sp. Y412MC52] gi|261377320|gb|ACX80063.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y412MC61] gi|317113400|gb|ADU95892.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y412MC52] Length = 218 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 120/199 (60%), Gaps = 3/199 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I++ P + ++ T+ ++ + LI+G FI + ++ ++ ++ L +Y+ F Sbjct: 5 FDIIVEYAP-YFFQGLLATIGVSLAGIIFGLILGLFIGLGKMS-TNLLVRLPFSWYINFF 62 Query: 66 RGTPLLVQLFVIFYG-LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL+VQ+ ++ +G +P + V++ +SL+LN +AY++EI R+ I SI KGQ +A Sbjct: 63 RGTPLVVQILLVHFGVMPLFFAQPNGIVSLAVSLSLNSAAYVAEIFRAGIQSIDKGQMEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G+T Q +R+IILPQ + P ++EFI ++K +S+ I PEI + Sbjct: 123 ARSLGMTHAQAMRYIILPQALKRMIPPFANEFIVLIKDSSLGMVIAAPEIMYWGKAAAGE 182 Query: 185 TYQPLIIYCELAFVYLILT 203 Y+ Y +AF+YLILT Sbjct: 183 YYRVWEPYLTVAFIYLILT 201 >gi|110800463|ref|YP_695035.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium perfringens ATCC 13124] gi|110675110|gb|ABG84097.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens ATCC 13124] Length = 223 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 125/205 (60%), Gaps = 11/205 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLIMHFY 61 F+ + + FP L A TL I+ I+ ++ ++G + ++ F I+ +I Y Sbjct: 6 FSFLKEYFPVFLEGA-KWTLIISAITVILGALLGTILCFMKRSKFSIFKVKILRVISTAY 64 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V + RGTPLL+Q++++++GLP GI + + II+++LN +AY+SEIIR+ I ++ KGQ Sbjct: 65 VEVIRGTPLLLQIYIVYFGLPSFGIQLEVLPSCIIAISLNSAAYVSEIIRAGIDAVDKGQ 124 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++G+ +R IILPQ I + +EF++I+K +S+ASTI + E+ +++ + Sbjct: 125 LEAARSLGMAEGMAMRLIILPQAIKNILPAIGNEFVAIIKESSMASTIGVAELMYSSKIV 184 Query: 182 VSTTY---QPLIIYCELAFVYLILT 203 TY +PLI+ +A Y ++T Sbjct: 185 TGATYKGFEPLIV---IAMFYFVMT 206 >gi|77409421|ref|ZP_00786118.1| GlnP [Streptococcus agalactiae COH1] gi|77171979|gb|EAO75151.1| GlnP [Streptococcus agalactiae COH1] Length = 469 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 128/216 (59%), Gaps = 9/216 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 LI +++ QLL + I TL + ISF I+++IG ++ + S+T+ ++ M F V I Sbjct: 252 LGLISNNYKQLL-SGIGTTLSLTLISFAIAMVIGIIFGMMSVSPSNTLRTISMIF-VDIV 309 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RG PL++ IF+G+P++ + FVA I+L+LN AYI+EI+R I ++P Sbjct: 310 RGIPLMIVAAFIFWGIPNLIESITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVP 369 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS ++G++ +T++ +ILPQ + ++F+ LK T++ S I + E+FQT Sbjct: 370 SGQMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTG 429 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + I++ YQ +Y LA +YL++ + + ++E Sbjct: 430 KIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLE 465 >gi|308069275|ref|YP_003870880.1| amino acid ABC transporter extracellular binding protein yqiX precursor [Paenibacillus polymyxa E681] gi|305858554|gb|ADM70342.1| Probable amino-acid ABC transporter extracellular binding protein yqiX precursor [Paenibacillus polymyxa E681] Length = 487 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 120/201 (59%), Gaps = 5/201 (2%) Query: 7 NLIID---SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 N I+D + L I TL ++ + + IIG I+++R+ II + YV Sbjct: 268 NNIVDIFWKYRSLYATGIGYTLLLSALGVLFGFIIGLIISLLRMSGV-RIIEWLGTTYVE 326 Query: 64 IFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I RGTP+LVQL +I YG+ +G+ F + II+L+LN SAY++EI R+ I ++ +GQ Sbjct: 327 ILRGTPMLVQLMIIHYGVALTLGVNFTPLQSGIITLSLNSSAYLAEIFRAGIQAVDRGQM 386 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ ++G+ R + +RH+ILPQ + + +EFI+I+K +S+ STI + +I AQ I Sbjct: 387 EAARSLGMGRGKAMRHVILPQAFKSILPAIGNEFITIIKESSIISTIGMVDIMYQAQVIK 446 Query: 183 STTYQPLIIYCELAFVYLILT 203 + TY+ L + A +Y ++T Sbjct: 447 NITYEGLSPFVIAAAIYFVMT 467 >gi|315650536|ref|ZP_07903602.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Eubacterium saburreum DSM 3986] gi|315487191|gb|EFU77507.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Eubacterium saburreum DSM 3986] Length = 230 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 117/203 (57%), Gaps = 5/203 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHFYV 62 N I D L + VTL + + ++ ++GF +A++R + +T +++ + + Y+ Sbjct: 12 NFITDDRWMSLLRGLAVTLKVTFFAVILGFVLGFSVAIVRDVYENTKKLKVLNFLCNVYL 71 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTP++VQL +I++ + I D +A +++ +N AY +EI RS I SIPKGQ Sbjct: 72 TVIRGTPVVVQLLIIYF-VIFSSIKIDKSIAAVLAFGINSGAYQAEIFRSGINSIPKGQM 130 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A ++G +QT+ +II+PQ I L +EFI ++K TSVA I + ++ + I Sbjct: 131 EAGRSLGFNYRQTMVNIIMPQAIKNVLPTLGNEFIVLMKETSVAGYIALEDLTKAGDIIR 190 Query: 183 STTYQPLIIYCELAFVYLILTSF 205 S TY ++ + +A +YLI+ F Sbjct: 191 SRTYSAMMPFLAVALLYLIMVMF 213 >gi|15893407|ref|NP_346756.1| glutamine-binding periplasmic protein fused to glutamine permease [Clostridium acetobutylicum ATCC 824] gi|15022937|gb|AAK78096.1|AE007524_1 Glutamine-binding periplasmic protein fused to glutamine permease [Clostridium acetobutylicum ATCC 824] Length = 477 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/217 (37%), Positives = 125/217 (57%), Gaps = 9/217 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---DTIISLIM 58 K E NL+ PQLL + +TL I VI++II FI I FFS +++ + Sbjct: 261 KPEQDNLVKQYAPQLL-KGLGMTLFIT----VIAMIIALFIGAIFGFFSISTSKVLNTLA 315 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 ++V I RGTPLLVQ F IF+G+P + G+ + VA II+++LN AY+SEI R I+SI Sbjct: 316 RWFVDIIRGTPLLVQAFFIFFGIPGLSGLKINPVVAGIIAVSLNAGAYMSEIFRGGILSI 375 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 +GQ +A+ ++G+ + + I+ PQ + + ++FI LK TS+ S I I E+ T Sbjct: 376 NQGQMEAARSLGIPYRTAMLKIVFPQAVKVMIPSIVNQFIISLKDTSILSVIGIQELTNT 435 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Q I+ T++ I+ +A +Y I+ I+ KIE Sbjct: 436 GQIIIGATFKAFQIWLIVAIMYFIVIKLLSILSRKIE 472 >gi|229120292|ref|ZP_04249542.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus 95/8201] gi|228663102|gb|EEL18692.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus 95/8201] Length = 214 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 105/163 (64%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + ++S ++ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILR-YMKIPVVSQVLGIIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + +A+I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIIIAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQ 176 >gi|294498359|ref|YP_003562059.1| putative amino acid ABC transporter permease [Bacillus megaterium QM B1551] gi|294348296|gb|ADE68625.1| putative amino acid ABC transporter, permease protein [Bacillus megaterium QM B1551] Length = 241 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/224 (36%), Positives = 129/224 (57%), Gaps = 15/224 (6%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 ++ P++L + +TL I+ IS + I G FIAV RI+ ++ I YV RGTP Sbjct: 10 LEQTPEVL-KGVPLTLTISIISMALGSIFGLFIAVCRIY-KIPLLKQIAVIYVSFMRGTP 67 Query: 70 LLVQLFVIFYGLP------------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 LLVQL+V FYG+P H+G + +I+ TLN SAY SE+ RSSI + Sbjct: 68 LLVQLYVFFYGIPIFIEFLNETQGWHLGGDTISPLIYALIAYTLNTSAYQSEVFRSSIQT 127 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ++A+Y+IG+T Q I+ II PQ++ + L + FIS++K+TS+A + + EI Sbjct: 128 IDRGQFEAAYSIGMTTFQAIKRIIFPQSLVAAIPNLGNIFISLIKATSLAFAVKVVEIMA 187 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ I + Y+ L +Y + +Y IL F + + IE ++ + Sbjct: 188 ISKVIANDGYRYLEMYLVASLIYWILCFFFERLFVVIEKKLSYY 231 >gi|116490803|ref|YP_810347.1| ABC-type amino acid transport system, permease and periplasmic component [Oenococcus oeni PSU-1] gi|116091528|gb|ABJ56682.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Oenococcus oeni PSU-1] Length = 545 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/210 (33%), Positives = 115/210 (54%), Gaps = 10/210 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD---------TII 54 WF I + +L I +TL ++ + V+ IIG I ++R + Sbjct: 296 NWFINIWKQYGNMLLRGIGMTLLLSIVGTVVGFIIGLLIGIVRTIPKAKKRPRRYLINFV 355 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + ++ Y+ IFRGTP++VQ V +YG I D + +I +++N AY++EIIR Sbjct: 356 NWLLSVYIEIFRGTPMIVQAAVFYYGAAQAFNINLDRTTSALIIVSINTGAYLAEIIRGG 415 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 IISI +GQ++A+ A+G+T Q + I+LPQ + S +++EFI +K TSV S I++ E Sbjct: 416 IISIDQGQFEAASALGMTHFQQMEKIVLPQAVRNSIPAVTNEFIVNIKDTSVLSIISVSE 475 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +F T I +Q Y ++ +YL+LT Sbjct: 476 LFFTGSTIAGQNFQFFHTYLTISLIYLVLT 505 >gi|306829197|ref|ZP_07462387.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus mitis ATCC 6249] gi|304428283|gb|EFM31373.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus mitis ATCC 6249] Length = 227 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 119/209 (56%), Gaps = 17/209 (8%) Query: 28 ACISFVISLIIGFF---IAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIFYGL 81 A I+ VIS+++ FF + V+ F + ++ F YVWIFRGTP++VQ+ + F L Sbjct: 17 ALITVVISILVVFFGTILGVLLAFAQRSRFKPLVWFANVYVWIFRGTPMMVQIMIAF-AL 75 Query: 82 PHI----------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 HI G+ + I+ +++N AY+SE +R+ I ++PKGQ +A+Y++G+ Sbjct: 76 MHIDAPTIQVGILGVDLSRLIPGILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIR 135 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 K +R++ILPQ I L +EFI+I+K +S+ S I + E++ A + +TTY PL Sbjct: 136 PKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVATTTYLPLTP 195 Query: 192 YCELAFVYLILTSFCYIIQIKIESSVTQH 220 AF YLI+TS + E+ + Q Sbjct: 196 LLFAAFYYLIMTSILTVALKAFENYIGQG 224 >gi|251790579|ref|YP_003005300.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247539200|gb|ACT07821.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 281 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 123/209 (58%), Gaps = 5/209 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +L D F Q ++V+T+ IS + +++ A R+ S I FYV +F Sbjct: 62 MHLSPDGFIQGAVLSVVITV----ISMLFCILLAVITAAGRLS-SSAIAFGCATFYVSLF 116 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQ+ +I+ LP +GIV +F + II+L+LN+ AY++E IRS ++++P+GQ +A+ Sbjct: 117 RGTPLLVQVLIIYLALPQVGIVMSAFTSGIIALSLNYGAYLAETIRSGVLAVPRGQKEAA 176 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL+R H++ PQ + P S+FIS++K +S+ S + + E+ AQ +T Sbjct: 177 MALGLSRWVITTHVVAPQALRIIIPPAGSQFISMIKDSSLVSLMGLWELNFLAQSYGRST 236 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Y + + A +Y +L+ ++Q ++E Sbjct: 237 YHYMEMLTTAAVIYWLLSIGLELLQGRLE 265 >gi|332366189|gb|EGJ43944.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK355] Length = 521 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 116/206 (56%), Gaps = 11/206 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---------DTIISLIM 58 ++ +++PQ L A +TL I+ + LIIG I V R + I + Sbjct: 284 ILAENWPQFLRGA-GLTLLISITGTIAGLIIGLLIGVFRTAPASKNKLLASLQKIFGWFL 342 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ Sbjct: 343 NVYIEIFRGTPMIVQSMVIYYGTAQAFGISIDRTIAAIFIVSINTGAYMSEIVRGGIFAV 402 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 403 DKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFS 462 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 I + TYQ + +A +Y +LT Sbjct: 463 GNTIATQTYQYFQTFTIIAVIYFVLT 488 >gi|323465674|gb|ADX69361.1| Amino acid ABC transporter permease protein [Lactobacillus helveticus H10] Length = 562 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 73/229 (31%), Positives = 126/229 (55%), Gaps = 14/229 (6%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT--------- 52 K W + ++ + I +TL +A + V+ IG + ++R + T Sbjct: 312 KENWLVTTWKQYGGMIMSGIGMTLLLALVGTVVGFFIGLLVGIVRTIPTPTTRGKRWALN 371 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ ++ YV IFRGTP++VQ VI+YG+ + + VA +I +++N AY++E+IR Sbjct: 372 VVKWLLSVYVEIFRGTPMMVQAAVIYYGIAQFWHLNLNRTVAALIIVSINTGAYLAEVIR 431 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 IIS P+ Q++A+ A+G+T Q + HIILPQ I +++EFI +K TSV S I++ Sbjct: 432 GGIISTPESQFEAASALGMTHNQKMWHIILPQAIKNCLPSITNEFIVNIKDTSVLSIISV 491 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLIL----TSFCYIIQIKIESS 216 E+F I S +++ Y ++ +YLIL T +I+ K+E + Sbjct: 492 SELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNLIERKLEGN 540 >gi|322832387|ref|YP_004212414.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321167588|gb|ADW73287.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 237 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/202 (31%), Positives = 117/202 (57%), Gaps = 5/202 (2%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIR--IFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 + ++TL + S +I G +A+++ F + ++++ FY+W+FRGTP+L Q+ Sbjct: 16 FQGALMTLLLTVCSLFFGIIAGLVLALLQESRFRAGSVLAF---FYLWLFRGTPVLFQII 72 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 ++ LP G+ F +F +++L+LN AY++EI+RS + ++ GQ A A+G+T+ Q Sbjct: 73 FVYNVLPTFGLRFSAFTCAVMALSLNEGAYMAEILRSGLQAVRSGQRTAGMALGMTQSQI 132 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R I+LPQ P+ ++ IS+LKS+++ S I + E+ A + S +++ C Sbjct: 133 MRKIVLPQAARIVLPPMGNQMISMLKSSALVSVIAVQELLLIANQTASASFRYFEALCAA 192 Query: 196 AFVYLILTSFCYIIQIKIESSV 217 YL+LTS + Q +E S+ Sbjct: 193 GIYYLVLTSVFMVGQAWLERSL 214 >gi|300856478|ref|YP_003781462.1| putative amino acid ABC transporter permease [Clostridium ljungdahlii DSM 13528] gi|300436593|gb|ADK16360.1| predicted ABC-type aminoacid transporter, permease component [Clostridium ljungdahlii DSM 13528] Length = 212 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 102/165 (61%), Gaps = 5/165 (3%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 I ++ Y W FRGTPLL+QLF ++GLP IGI A I+ T+N++AY++EI RS Sbjct: 47 IKAVLSLYTWAFRGTPLLLQLFFTYFGLPVIGIRLSPLAAASIAFTINYAAYLAEIFRSG 106 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SI KGQ++AS +G+ QT+ II+PQ I P+ +E I+++K +++ +TI + + Sbjct: 107 IESIDKGQFEASKVLGMNYCQTMIKIIIPQAIRNVIPPVCNESINLIKDSALVATIGVGD 166 Query: 174 IFQTAQRIVST--TYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 + + A+ +V+ T P II A +YLILTS + K+E Sbjct: 167 LLRAAKEVVTRDFTITPFIIA---AILYLILTSVLVMAFRKLEKK 208 >gi|70729726|ref|YP_259465.1| amino acid ABC transporter [Pseudomonas fluorescens Pf-5] gi|68344025|gb|AAY91631.1| amino acid ABC transporter [Pseudomonas fluorescens Pf-5] Length = 219 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 133/212 (62%), Gaps = 5/212 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I+ + +LL + T+ + S V+SL+ G A+I + ++ ++SL + F W+ GT Sbjct: 8 ILTPYSELLATGLWWTIVLFLCSSVLSLMAGIAFALI-VLYTPKLVSLPIRFMTWLLMGT 66 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QL++I+YGL +GI + +A II L+L+F+ Y +++IR+ ++S+ GQ + + +I Sbjct: 67 PLLLQLYLIYYGLVQVGIDIPALMAGIIGLSLHFAVYNADVIRAGVLSVDPGQIEGARSI 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+R Q R++I+PQ + ++ PL + I +LK TS+ S I I E+ +AQR VS TY P Sbjct: 127 GLSRSQAQRYVIVPQALRSTLAPLGNNLIVLLKDTSLVSIIGIAELVYSAQRAVSETYSP 186 Query: 189 LIIYCELAFVY----LILTSFCYIIQIKIESS 216 Y +A +Y L+L + ++++ K+E S Sbjct: 187 FEFYLAVAVIYYAVNLVLEAGLHLLETKVEMS 218 >gi|121592679|ref|YP_984575.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax sp. JS42] gi|222109459|ref|YP_002551723.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax ebreus TPSY] gi|120604759|gb|ABM40499.1| amino acid ABC transporter membrane protein, PAAT family [Acidovorax sp. JS42] gi|221728903|gb|ACM31723.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax ebreus TPSY] Length = 260 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/160 (36%), Positives = 95/160 (59%), Gaps = 2/160 (1%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 + FY+W RGTPLLVQ+ +++ LP + G+ F A +++L LN AY +E IR+ + Sbjct: 91 VASFYIWAIRGTPLLVQILFVYFALPVLVPGLNLPDFAAAVVALGLNVGAYNAEAIRAGL 150 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +++P+GQ +A+ A+GL+R ++ PQ + PL S F+++LK +S+A I + E+ Sbjct: 151 LAVPRGQTEAARALGLSRTHVFFDVVFPQAFKIALPPLVSNFVALLKDSSLAYAIGVVEL 210 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 RI S T+QP+ +A YLILT+ + IE Sbjct: 211 TNVGNRIQSATFQPVATLTTVAITYLILTTLVTQVTHAIE 250 >gi|47092916|ref|ZP_00230698.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 4b H7858] gi|47018742|gb|EAL09493.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 4b H7858] Length = 221 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 73/215 (33%), Positives = 124/215 (57%), Gaps = 7/215 (3%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 + I + P LL A TL + ++ V S+ +G +AV I + I++ Y+W Sbjct: 7 RMMDYITEILPALLDGA-KTTLLVFAVTLVCSIPLGAVVAVGNIS-KIAPLKFILNIYIW 64 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I RGTPLL+QL I+YGLP IG+VFD A+ I+ LN++AY +EI R +SI GQ++ Sbjct: 65 IMRGTPLLLQLIFIYYGLPIIGVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENGQYE 124 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 ++ +GLT QT++ I+LPQ + + +E I+++K +S+ + I ++ + + +S Sbjct: 125 SAKVLGLTYGQTLQKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKIAMS 184 Query: 184 --TTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 T PL++ +A +YL LT+ I+ ++E Sbjct: 185 RDVTLIPLVL---VAAIYLALTAILTILFKQLEKR 216 >gi|332073151|gb|EGI83630.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17570] Length = 209 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/171 (37%), Positives = 101/171 (59%), Gaps = 11/171 (6%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISE 108 + YVWIFRGTP++VQ+ + F L HI G+ F + I+ +++N AY+SE Sbjct: 36 NLYVWIFRGTPMMVQIMIAF-ALMHINAPTIQIGILGVDFSRLIPGILIISMNSGAYVSE 94 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 +R+ I ++PKGQ +A+Y++G+ K +R++ILPQ I L +EFI+I+K +S+ S Sbjct: 95 TVRAGINAVPKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSA 154 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 I + E++ A + +TTY PL AF YLI+TS + E + Q Sbjct: 155 IGVMELWNGATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQ 205 >gi|322517586|ref|ZP_08070455.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] gi|322123846|gb|EFX95420.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] Length = 569 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 122/226 (53%), Gaps = 11/226 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF--FSDTIISLIMHFYVWI- 64 +I ++PQ L +TL I+ I V+ IG I V R ++ ++L+ + W+ Sbjct: 340 IIAKNWPQFLRGT-GITLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKLFGWVL 398 Query: 65 ------FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 FRGTP++VQ VI+YG G+ D +A + +++N AY+SEI+R I ++ Sbjct: 399 NVYIEVFRGTPMIVQSMVIYYGTAQAFGVNIDRTLAAVFIVSINTGAYMSEIVRGGIFAV 458 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G T QT+R I+LPQ I +EF+ +K TSV + I++ E++ Sbjct: 459 DKGQFEAATALGFTHGQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVVELYFA 518 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + S TYQ + +A +Y +LT I +E + Q TY+ Sbjct: 519 GNTVASQTYQYFQTFFVIAAIYFVLTFTVTRILRYVERRLDQDTYT 564 >gi|314939959|ref|ZP_07847159.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|314942568|ref|ZP_07849402.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|314947466|ref|ZP_07850881.1| ABC transporter, permease protein [Enterococcus faecium TX0082] gi|314952490|ref|ZP_07855491.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|314992413|ref|ZP_07857839.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|314996253|ref|ZP_07861312.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|313589575|gb|EFR68420.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|313593048|gb|EFR71893.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|313595396|gb|EFR74241.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|313598672|gb|EFR77517.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|313640793|gb|EFS05373.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|313646016|gb|EFS10596.1| ABC transporter, permease protein [Enterococcus faecium TX0082] Length = 487 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 80/220 (36%), Positives = 127/220 (57%), Gaps = 17/220 (7%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIG-----FFIAVIRIFFSDTIISLIMH 59 + LI +++ Q L + T+ + ISF ++++IG F +A IR + I Sbjct: 275 FLGLIQNNY-QALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIRA------LRTIAS 327 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV I RG P++V F IF+GLP I G F+A +I+LTLN SAYI+EI+R I ++P Sbjct: 328 IYVDIIRGIPMMVLAFFIFFGLPGIVGFTIPDFLAGVITLTLNASAYIAEIVRGGINAVP 387 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS ++GL+ +T++ IILPQ I ++F+ LK T++ S I + E+ QT Sbjct: 388 VGQMEASRSLGLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTG 447 Query: 179 QRIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIE 214 + IV+ T Q +Y +A +YLI LT +++ K++ Sbjct: 448 KIIVARTTQSTYVYLIIAIMYLILITALTKLAKVLEKKVK 487 >gi|228989784|ref|ZP_04149764.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus pseudomycoides DSM 12442] gi|228769931|gb|EEM18514.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus pseudomycoides DSM 12442] Length = 214 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 67/163 (41%), Positives = 104/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L ++VTL IA ++ ++S IIG + +R + ++S ++ F V I R PLL+ +F Sbjct: 15 LLKGLLVTLEIAVVAILLSFIIGSIVGTLR-YAKIPVVSQLLAFIVEIIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ A GL+ QT+ Sbjct: 74 TYFALPEAGLKLEITTAAIVALTIFEAAMISEIVRSGLLSIEKGQIEAARASGLSYTQTL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|307316662|ref|ZP_07596105.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Sinorhizobium meliloti AK83] gi|306897860|gb|EFN28603.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Sinorhizobium meliloti AK83] Length = 221 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + P L+ + +T+ + V++ +IG A++R+ + T I+ + F Sbjct: 1 MEWDW-EFVRQIMPTLI-EGLKITILATALGSVVAAVIGLVFAILRMT-APTPIARVTSF 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V RGTPLLVQL+ IFY LP IGI + VA +I L +++ Y +E+ R+ I ++P+G Sbjct: 58 AVEFIRGTPLLVQLYFIFYVLPDIGIRLPALVAGVIGLGIHYGTYAAEVYRAGIENVPRG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A LT +QT H+ILPQ I L++ I++ K T + S IT+ E+ A+ Sbjct: 118 QWEAAKATNLTARQTWIHVILPQAIPPMIPALANYLIAMFKETPLLSAITVLELMNQAKS 177 Query: 181 IVSTTYQ 187 I ++ Y+ Sbjct: 178 IANSNYR 184 >gi|260886618|ref|ZP_05897881.1| L-cystine ABC transporter, permease protein [Selenomonas sputigena ATCC 35185] gi|330839549|ref|YP_004414129.1| polar amino acid ABC transporter, inner membrane subunit [Selenomonas sputigena ATCC 35185] gi|260863761|gb|EEX78261.1| L-cystine ABC transporter, permease protein [Selenomonas sputigena ATCC 35185] gi|329747313|gb|AEC00670.1| polar amino acid ABC transporter, inner membrane subunit [Selenomonas sputigena ATCC 35185] Length = 214 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 62/172 (36%), Positives = 110/172 (63%), Gaps = 1/172 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L+ +TL I C++ ++SL +G +A+ RI + L+M FY+W+ RGTPL++QL Sbjct: 10 LMMEGAQITLEIFCVTLLLSLPLGLLVALCRISKLGPL-CLLMEFYIWLMRGTPLMLQLL 68 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +++ LP +GI A +++ TLN++AY +EI R+ I SI +GQ++A+ ++G+T QT Sbjct: 69 FVYFALPMVGIRLPDIAAALLAFTLNYAAYFAEIFRAGIQSIGRGQYEAAKSLGMTYTQT 128 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +R II+PQ I P+S+E I+++K TS+ + + ++ + A+ IV + Sbjct: 129 MRRIIVPQMIRHVLPPVSNETINLVKDTSLIYILAMNDLLRVARTIVQREFD 180 >gi|229159722|ref|ZP_04287731.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus R309803] gi|228623747|gb|EEK80564.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus R309803] Length = 214 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/163 (40%), Positives = 104/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A I+ V+S IIG I ++R + ++S I+ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVIGILR-YMKIPVVSQILGIIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A+I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|218460143|ref|ZP_03500234.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli Kim 5] Length = 157 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/145 (45%), Positives = 87/145 (60%), Gaps = 9/145 (6%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ +S P LL+A ++ T+P+ +SF LI+G A+ R+F ++ I FYVW Sbjct: 3 HWLQLMAESLPSLLWAGLIFTIPLTLLSFFFGLILGLITAIARLF-GPAPVAAIARFYVW 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLVQLFVIFYGLP IGI+ D+F A +I TLN AY SEIIR+ I S+ G Sbjct: 62 VIRGTPLLVQLFVIFYGLPSIGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVHNG--- 118 Query: 124 ASYAIGLTRKQ----TIRHIILPQT 144 S GL + + ILPQ Sbjct: 119 -SVGSGLFDRHELASAMSRTILPQA 142 >gi|16264164|ref|NP_436956.1| putative amino acid ABC transporter permease protein [Sinorhizobium meliloti 1021] gi|15140289|emb|CAC48816.1| EhuD [Sinorhizobium meliloti 1021] Length = 220 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + P L+ + +T+ + V++ +IG A++R+ + T I+ + F Sbjct: 1 MEWDW-EFVRQIMPTLI-EGLKITILATALGSVVAAVIGLVFAILRMT-APTPIARVTSF 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V RGTPLLVQL+ IFY LP IGI + VA +I L +++ Y +E+ R+ I ++P+G Sbjct: 58 AVEFIRGTPLLVQLYFIFYVLPDIGIRLPALVAGVIGLGIHYGTYAAEVYRAGIENVPRG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A LT +QT H+ILPQ I L++ I++ K T + S IT+ E+ A+ Sbjct: 118 QWEAAKATNLTARQTWIHVILPQAIPPMIPALANYLIAMFKETPLLSAITVLELMNQAKS 177 Query: 181 IVSTTYQ 187 I ++ Y+ Sbjct: 178 IANSNYR 184 >gi|116627112|ref|YP_819731.1| ABC-type amino acid transport system, permease and periplasmic component [Streptococcus thermophilus LMD-9] gi|116100389|gb|ABJ65535.1| ABC-type amino acid transport system, permease and periplasmic component [Streptococcus thermophilus LMD-9] Length = 516 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/226 (33%), Positives = 122/226 (53%), Gaps = 11/226 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF--FSDTIISLIMHFYVW-- 63 +I ++PQ L +TL I+ I V+ IG I V R ++ ++L+ + W Sbjct: 286 IIAKNWPQFLRG-TAMTLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKIFGWFL 344 Query: 64 -----IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 +FRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ Sbjct: 345 NVYIEVFRGTPMIVQSMVIYYGTAQAFGINIDRTLAAIFIVSINTGAYMSEIVRGGIFAV 404 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G T QT+R I+LPQ I +EF+ +K TSV + I++ E++ Sbjct: 405 DKGQFEAATALGFTHGQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVVELYFA 464 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + + TYQ + +A +Y +LT I +E + Q TY+ Sbjct: 465 GNTVATQTYQYFQTFFVIAAIYFVLTFTVTRILRYVERRLDQDTYT 510 >gi|330836706|ref|YP_004411347.1| amino acid ABC transporter membrane protein, PAAT family [Spirochaeta coccoides DSM 17374] gi|329748609|gb|AEC01965.1| amino acid ABC transporter membrane protein, PAAT family [Spirochaeta coccoides DSM 17374] Length = 289 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/185 (38%), Positives = 112/185 (60%), Gaps = 2/185 (1%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + I VT + + ++S++IG +A + +I+LI YV + RG PLLVQL I+ Sbjct: 89 SGIPVTFQVTVFAIILSVVIGV-LAGLGAVSKSRVINLISGVYVELIRGIPLLVQLIFIY 147 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 + + I + VA II+L + F AY+ EIIR+ I +IPKGQ +A+ A+GLTR Q R Sbjct: 148 FAVGRF-INVEGVVAAIIALGICFGAYMGEIIRAGIQAIPKGQMEAAIALGLTRTQAFRS 206 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 +ILPQTI + +EFIS+LK +S+ ST+ + +I + + +S T+ L +A + Sbjct: 207 VILPQTIKIVLPAIGNEFISMLKDSSLVSTLALSDILRRGREYISRTFLSLETMLIVALI 266 Query: 199 YLILT 203 YLI+T Sbjct: 267 YLIIT 271 >gi|15604848|ref|NP_219632.1| amino acid ABC transporter ATPase [Chlamydia trachomatis D/UW-3/CX] gi|76788844|ref|YP_327930.1| GlnP [Chlamydia trachomatis A/HAR-13] gi|166154350|ref|YP_001654468.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis 434/Bu] gi|166155225|ref|YP_001653480.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|237802559|ref|YP_002887753.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis B/Jali20/OT] gi|237804476|ref|YP_002888630.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis B/TZ1A828/OT] gi|255348491|ref|ZP_05380498.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis 70] gi|255503033|ref|ZP_05381423.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis 70s] gi|255506704|ref|ZP_05382343.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis D(s)2923] gi|301335603|ref|ZP_07223847.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis L2tet1] gi|3328528|gb|AAC67720.1| ABC Amino Acid Transporter Permease [Chlamydia trachomatis D/UW-3/CX] gi|76167374|gb|AAX50382.1| GlnP [Chlamydia trachomatis A/HAR-13] gi|165930338|emb|CAP03824.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis 434/Bu] gi|165931213|emb|CAP06778.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|231272776|emb|CAX09682.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis B/TZ1A828/OT] gi|231273793|emb|CAX10576.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis B/Jali20/OT] gi|289525171|emb|CBJ14645.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis Sweden2] gi|296434718|gb|ADH16896.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis E/150] gi|296435645|gb|ADH17819.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis G/9768] gi|296436568|gb|ADH18738.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis G/11222] gi|296437505|gb|ADH19666.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis G/11074] gi|296438436|gb|ADH20589.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis E/11023] gi|297140004|gb|ADH96762.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis G/9301] gi|297748258|gb|ADI50804.1| GlnP [Chlamydia trachomatis D-EC] gi|297749138|gb|ADI51816.1| GlnP [Chlamydia trachomatis D-LC] Length = 214 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 117/205 (57%), Gaps = 3/205 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIR-IFFSDTIISLIMHFYVWIFRGTPLLVQ 73 +LL TL I IS V ++G+ I + +F I + +FYV RGTPL +Q Sbjct: 9 KLLLRGCGYTLLITAISLVCGFVLGWGIGTVNSRYFPCRISKFLGNFYVVAVRGTPLFIQ 68 Query: 74 LFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 + ++++GLP I + VA +I+LTLN +AY++E +R+ I ++P QW+A+ +G T Sbjct: 69 ILIVYFGLPSLIKVNLSPLVAGLIALTLNSAAYLAENVRAGINALPVQQWEAAKVLGYTG 128 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 Q HI+ PQ L++EF+S++K +S+ + +PE+ + + IV+ P+ +Y Sbjct: 129 PQIFLHILYPQVFKNILPSLTNEFVSLIKESSILMVVGVPELTKVTKDIVARELNPMEMY 188 Query: 193 CELAFVYLILTS-FCYIIQIKIESS 216 A +YLI+TS F Y ++ + S Sbjct: 189 LICAGLYLIMTSAFSYFARLSEKES 213 >gi|324989902|gb|EGC21844.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK353] Length = 521 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 116/206 (56%), Gaps = 11/206 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---------DTIISLIM 58 ++ +++PQ L A +TL I+ + LIIG I V R + I + Sbjct: 284 ILTENWPQFLRGA-GLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFL 342 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ Sbjct: 343 NVYIEIFRGTPMIVQSMVIYYGTAQAFGISIDRTIAAIFIVSINTGAYMSEIVRGGIFAV 402 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 403 DKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFS 462 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 I + TYQ + +A +Y +LT Sbjct: 463 GNTIATQTYQYFQTFTIIAVIYFVLT 488 >gi|255019253|ref|ZP_05291379.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL F2-515] Length = 173 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 60/164 (36%), Positives = 104/164 (63%), Gaps = 5/164 (3%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + I++ Y+WI RGTPLL+QL I+YGLP IG+VFD A+ I+ LN++AY +EI R Sbjct: 5 LKFILNIYIWIMRGTPLLLQLIFIYYGLPIIGVVFDRMDAVFIAFILNYAAYFAEIFRGG 64 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 +SI GQ++++ +GLT QT+R I+LPQ + + +E I+++K +S+ + I + Sbjct: 65 FLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGD 124 Query: 174 IFQTAQRIVS--TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + + + +S T PL++ +A +YL LT+ ++ ++E+ Sbjct: 125 LLRAGKIAMSRDVTLIPLVL---VAAIYLALTAILTVLFKQLEN 165 >gi|121604975|ref|YP_982304.1| polar amino acid ABC transporter inner membrane subunit [Polaromonas naphthalenivorans CJ2] gi|120593944|gb|ABM37383.1| amino acid ABC transporter membrane protein 1, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 227 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 67/198 (33%), Positives = 120/198 (60%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ + +P+LL A TL ++ + V ++G F A+ + S ++ + YV + Sbjct: 7 FSAPLAYWPELL-AGAWTTLALSLSATVFGFLLGVFCALTKTGHS-VWLARVASAYVELI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLLVQ+F++++GL +G+ +F A I+L +N AY SEI+R+ I SIP+GQ +A+ Sbjct: 65 RNTPLLVQIFIVYFGLSSLGLQVGAFTAATIALVVNVGAYTSEIVRAGIDSIPRGQMEAA 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 + L+R QT+RH++LP I L+S+++ ++ ++S+ S I+ E+ A RI S T Sbjct: 125 ECMALSRWQTLRHVVLPPAIERVYPALTSQYVLLMLASSICSQISAEELTAVANRIQSDT 184 Query: 186 YQPLIIYCELAFVYLILT 203 ++ + Y +A YL+++ Sbjct: 185 FRSVETYLIVAGAYLLMS 202 >gi|69248956|ref|ZP_00604829.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Enterococcus faecium DO] gi|258615978|ref|ZP_05713748.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium DO] gi|293557298|ref|ZP_06675844.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1039] gi|293560170|ref|ZP_06676672.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1162] gi|294616498|ref|ZP_06696279.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1636] gi|294621567|ref|ZP_06700733.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium U0317] gi|68194329|gb|EAN08842.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Enterococcus faecium DO] gi|291590646|gb|EFF22374.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1636] gi|291598872|gb|EFF29923.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium U0317] gi|291600550|gb|EFF30856.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1039] gi|291605842|gb|EFF35274.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1162] Length = 500 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 80/220 (36%), Positives = 127/220 (57%), Gaps = 17/220 (7%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIG-----FFIAVIRIFFSDTIISLIMH 59 + LI +++ Q L + T+ + ISF ++++IG F +A IR + I Sbjct: 288 FLGLIQNNY-QALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIRA------LRTIAS 340 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV I RG P++V F IF+GLP I G F+A +I+LTLN SAYI+EI+R I ++P Sbjct: 341 IYVDIIRGIPMMVLAFFIFFGLPGIVGFTIPDFLAGVITLTLNASAYIAEIVRGGINAVP 400 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS ++GL+ +T++ IILPQ I ++F+ LK T++ S I + E+ QT Sbjct: 401 VGQMEASRSLGLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTG 460 Query: 179 QRIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIE 214 + IV+ T Q +Y +A +YLI LT +++ K++ Sbjct: 461 KIIVARTTQSTYVYLIIAIMYLILITALTKLAKVLEKKVK 500 >gi|325686791|gb|EGD28816.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK72] Length = 521 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 116/206 (56%), Gaps = 11/206 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---------DTIISLIM 58 ++ +++PQ L A +TL I+ + LIIG I V R + I + Sbjct: 284 ILAENWPQFLRGA-GLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFL 342 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ Sbjct: 343 NVYIEIFRGTPMIVQSMVIYYGTAQAFGISIDRTIAAIFIVSINTGAYMSEIVRGGIFAV 402 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 403 DKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFS 462 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 I + TYQ + +A +Y +LT Sbjct: 463 GNTIATQTYQYFQTFTIIAVIYFVLT 488 >gi|307708519|ref|ZP_07644984.1| amino acid ABC transporter, permease protein [Streptococcus mitis NCTC 12261] gi|307615435|gb|EFN94643.1| amino acid ABC transporter, permease protein [Streptococcus mitis NCTC 12261] Length = 227 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/228 (32%), Positives = 120/228 (52%), Gaps = 19/228 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM---HFYV 62 F+ + P Y A+V L C+ F G + V+ F + ++ + YV Sbjct: 3 FSFLPKYLPYFNYGAVVTVLISICVVF-----FGTILGVVLAFGQRSKFKPLVWLANLYV 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 WIFRGTP++VQ+ + F L HI G+ + I+ +++N AY+SE +R+ Sbjct: 58 WIFRGTPMMVQIMIAF-ALMHINAPTIQVGILGVDLSRLIPGILIISMNSGAYVSETVRA 116 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++PKGQ +A+Y++G+ K +R++ILPQ I L +EFI+I+K +S+ S I + Sbjct: 117 GINAVPKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVM 176 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E++ A + +TTY PL AF YLI+TS + E + Q Sbjct: 177 ELWNGATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKRMGQG 224 >gi|327462865|gb|EGF09187.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1057] gi|328944941|gb|EGG39099.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1087] Length = 521 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 116/206 (56%), Gaps = 11/206 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---------DTIISLIM 58 ++ +++PQ L A +TL I+ + LIIG I V R + I + Sbjct: 284 ILAENWPQFLRGA-GLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFL 342 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ Sbjct: 343 NVYIEIFRGTPMIVQSMVIYYGTAQAFGISIDRTIAAIFIVSINTGAYMSEIVRGGIFAV 402 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 403 DKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFS 462 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 I + TYQ + +A +Y +LT Sbjct: 463 GNTIATQTYQYFQTFTIIAVIYFVLT 488 >gi|317495050|ref|ZP_07953422.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Gemella moribillum M424] gi|316914822|gb|EFV36296.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Gemella moribillum M424] Length = 213 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 60/167 (35%), Positives = 105/167 (62%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +++++ YV + R TP+LVQ+ +I++ LP +GI F F++ II+L++N AY+SEI RS Sbjct: 47 VLNVLATIYVEVIRNTPILVQIMIIYFALPEVGISFTPFMSAIIALSINSGAYVSEIFRS 106 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I++I KGQ +A ++GL+ QT++ IILPQ + S L +EFIS++K +S+ + + Sbjct: 107 GILAIDKGQMEAGRSLGLSYFQTMKFIILPQALKNSLPALGNEFISLVKESSIVYFVGVA 166 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 +I A + + TY+ Y A +Y I+TS + ++E + + Sbjct: 167 DIMFAANTVKNATYETFGPYLIAAAIYFIITSVLSFLVKRLEKKLAK 213 >gi|293568103|ref|ZP_06679440.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1071] gi|294617429|ref|ZP_06697063.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1679] gi|291589185|gb|EFF20996.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1071] gi|291596335|gb|EFF27594.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1679] Length = 500 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 80/220 (36%), Positives = 127/220 (57%), Gaps = 17/220 (7%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIG-----FFIAVIRIFFSDTIISLIMH 59 + LI +++ Q L + T+ + ISF ++++IG F +A IR + I Sbjct: 288 FLGLIQNNY-QALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIRA------LRTIAS 340 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV I RG P++V F IF+GLP I G F+A +I+LTLN SAYI+EI+R I ++P Sbjct: 341 IYVDIIRGIPMMVLAFFIFFGLPGIVGFTIPDFLAGVITLTLNASAYIAEIVRGGINAVP 400 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS ++GL+ +T++ IILPQ I ++F+ LK T++ S I + E+ QT Sbjct: 401 VGQMEASRSLGLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTG 460 Query: 179 QRIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIE 214 + IV+ T Q +Y +A +YLI LT +++ K++ Sbjct: 461 KIIVARTTQSTYVYLIIAIMYLILITALTKLAKVLEKKVK 500 >gi|256545654|ref|ZP_05473011.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Anaerococcus vaginalis ATCC 51170] gi|256398630|gb|EEU12250.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Anaerococcus vaginalis ATCC 51170] Length = 520 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/223 (33%), Positives = 124/223 (55%), Gaps = 12/223 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-----------IISLIMHF 60 + L I TL I+ IS +I +IG +AVIR D I++ I+ Sbjct: 287 EYSSLFINGIFSTLFISIISTLIGFVIGLIVAVIRKIKVDKNKNIFAYILQKIVNFILVC 346 Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ +FRGTP++VQ +IFYG + I + +A I +++N AY+SE++R I S+ + Sbjct: 347 YIEVFRGTPMMVQAILIFYGAKQFLSIDMSTMLAAFIIVSINTGAYLSEVVRGGINSVDE 406 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A A+G+T QT+ ++++PQTI + +++EF+ +K TSV + I++ E+F ++ Sbjct: 407 GQFEACKALGMTHSQTMFNVVIPQTIKSILPAIANEFVVNIKDTSVLNVISVTELFFVSK 466 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 I +TYQ Y A +Y ILT I + IE T + Sbjct: 467 SIAGSTYQIFQTYLITAIIYFILTFITTRIILLIEKKFTNKEF 509 >gi|332359202|gb|EGJ37023.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK49] Length = 521 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 116/206 (56%), Gaps = 11/206 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---------DTIISLIM 58 ++ +++PQ L A +TL I+ + LIIG I V R + I + Sbjct: 284 ILAENWPQFLRGA-GLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFL 342 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ Sbjct: 343 NIYIEIFRGTPMIVQSMVIYYGTAQAFGISIDRTIAAIFIVSINTGAYMSEIVRGGIFAV 402 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 403 DKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFS 462 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 I + TYQ + +A +Y +LT Sbjct: 463 GNTIATQTYQYFQTFTIIAVIYFVLT 488 >gi|332359820|gb|EGJ37634.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1056] Length = 521 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 116/206 (56%), Gaps = 11/206 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---------DTIISLIM 58 ++ +++PQ L A +TL I+ + LIIG I V R + I + Sbjct: 284 ILAENWPQFLRGA-GLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFL 342 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ Sbjct: 343 NIYIEIFRGTPMIVQSMVIYYGTAQAFGISIDRTIAAIFIVSINTGAYMSEIVRGGIFAV 402 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 403 DKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFS 462 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 I + TYQ + +A +Y +LT Sbjct: 463 GNTIATQTYQYFQTFTIIAVIYFVLT 488 >gi|332365497|gb|EGJ43257.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1059] Length = 521 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 116/206 (56%), Gaps = 11/206 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---------DTIISLIM 58 ++ +++PQ L A +TL I+ + LIIG I V R + I + Sbjct: 284 ILAENWPQFLRGA-GLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFL 342 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ Sbjct: 343 NVYIEIFRGTPMIVQSMVIYYGTAQAFGISIDRTIAAIFIVSINTGAYMSEIVRGGIFAV 402 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 403 DKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFS 462 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 I + TYQ + +A +Y +LT Sbjct: 463 GNTIATQTYQYFQTFTIIAVIYFVLT 488 >gi|327468260|gb|EGF13745.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK330] Length = 521 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 116/206 (56%), Gaps = 11/206 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---------DTIISLIM 58 ++ +++PQ L A +TL I+ + LIIG I V R + I + Sbjct: 284 ILAENWPQFLRGA-ELTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFL 342 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ Sbjct: 343 NVYIEIFRGTPMIVQSMVIYYGTAQAFGISIDRTIAAIFIVSINTGAYMSEIVRGGIFAV 402 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 403 DKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFS 462 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 I + TYQ + +A +Y +LT Sbjct: 463 GNTIATQTYQYFQTFTIIAVIYFVLT 488 >gi|293377691|ref|ZP_06623880.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] gi|293571887|ref|ZP_06682903.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E980] gi|291608141|gb|EFF37447.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E980] gi|292643691|gb|EFF61812.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] Length = 500 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/220 (35%), Positives = 127/220 (57%), Gaps = 17/220 (7%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIG-----FFIAVIRIFFSDTIISLIMH 59 + LI +++ Q L + T+ + ISF ++++IG F +A IR + + Sbjct: 288 FLGLIQNNY-QALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIRA------LRTVAS 340 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV I RG P++V F IF+GLP I G F+A +I+LTLN SAYI+EI+R I ++P Sbjct: 341 IYVDIIRGIPMMVLAFFIFFGLPGIVGFTIPDFIAGVITLTLNASAYIAEIVRGGINAVP 400 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS ++GL+ +T++ IILPQ I ++F+ LK T++ S I + E+ QT Sbjct: 401 VGQMEASRSLGLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTG 460 Query: 179 QRIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIE 214 + IV+ T Q +Y +A +YLI LT +++ K++ Sbjct: 461 KIIVARTTQSTYVYLIIAIMYLILITALTKLAKVLEKKVK 500 >gi|257870688|ref|ZP_05650341.1| polar amino acid ABC transporter [Enterococcus gallinarum EG2] gi|257804852|gb|EEV33674.1| polar amino acid ABC transporter [Enterococcus gallinarum EG2] Length = 214 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 124/211 (58%), Gaps = 3/211 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + ++ PQLL A +T+ + ++ + S+ +G +A I + I+ I+ YVW+ R Sbjct: 3 DYLVSVMPQLLSGA-GITIKLFGLTLIGSIPLGIILAFI-LASRLRILKAIVQVYVWLMR 60 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL +FYGLP + IVFD F A +I+ +N++AY +EI R I SIP GQ++A+ Sbjct: 61 GTPLLLQLIFVFYGLPILNIVFDRFEAALIAFIINYAAYYAEIFRGGIQSIPAGQYEAAK 120 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 + L QTIR II+PQ + + + +E I+++K TS+ + + ++ + +I Sbjct: 121 VLRLAPLQTIRKIIIPQVVKITLPSVGNEVINLVKDTSLVYILGLSDVMRIG-KIAMERD 179 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 L+ +A +YL++T +I ++E+ + Sbjct: 180 STLVPLLGVALIYLMMTGIFTLILKQLETKL 210 >gi|323127536|gb|ADX24833.1| glutamine-binding protein / glutamine transport system permease protein glnP [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 725 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 124/214 (57%), Gaps = 9/214 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ +++ QL +A + TL + ISF I++IIG ++ + + ++ LI +V + RG Sbjct: 510 LLSNNYKQL-WAGLGTTLSLTLISFAIAMIIGIIFGMMAVSPTKSL-RLISTIFVDVVRG 567 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ IF+G+P++ + F+A I+L+LN AYI+EI+R I ++P G Sbjct: 568 IPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGGAYIAEIVRGGIEAVPAG 627 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++GL T+R +ILPQ + ++F+ LK T++ S I + E+FQT + Sbjct: 628 QMEASRSLGLPYATTMRKVILPQAVKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKI 687 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I++ YQ +Y LA +YLI+ + + ++E Sbjct: 688 IIARNYQSFRMYAILAIIYLIMITLLTRLAKRLE 721 >gi|251782718|ref|YP_002997021.1| glutamine-binding protein/glutamine transportsystem permease [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391348|dbj|BAH81807.1| glutamine-binding protein/glutamine transportsystem permease protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 725 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 124/214 (57%), Gaps = 9/214 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ +++ QL +A + TL + ISF I++IIG ++ + + ++ LI +V + RG Sbjct: 510 LLSNNYKQL-WAGLGTTLSLTLISFAIAMIIGIIFGMMAVSPTKSL-RLISTIFVDVVRG 567 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ IF+G+P++ + F+A I+L+LN AYI+EI+R I ++P G Sbjct: 568 IPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGGAYIAEIVRGGIEAVPAG 627 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++GL T+R +ILPQ + ++F+ LK T++ S I + E+FQT + Sbjct: 628 QMEASRSLGLPYATTMRKVILPQAVKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKI 687 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I++ YQ +Y LA +YLI+ + + ++E Sbjct: 688 IIARNYQSFRMYAILAIIYLIMITLLTRLAKRLE 721 >gi|125718753|ref|YP_001035886.1| amino acid ABC transporter permease/amino acid-binding protein [Streptococcus sanguinis SK36] gi|125498670|gb|ABN45336.1| Amino acid ABC transporter, amino acid-binding protein/permease protein, putative [Streptococcus sanguinis SK36] Length = 521 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 116/206 (56%), Gaps = 11/206 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---------DTIISLIM 58 ++ +++PQ L A +TL I+ + LIIG I V R + I + Sbjct: 284 ILAENWPQFLRGA-GLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFL 342 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ Sbjct: 343 NVYIEIFRGTPMIVQSMVIYYGTAQAFGISIDRTIAAIFIVSINTGAYMSEIVRGGIFAV 402 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 403 DKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFS 462 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 I + TYQ + +A +Y +LT Sbjct: 463 GNTIATQTYQYFQTFTIIAVIYFVLT 488 >gi|30018609|ref|NP_830240.1| cystine transport system permease protein [Bacillus cereus ATCC 14579] gi|296501181|ref|YP_003662881.1| cystine transport system permease [Bacillus thuringiensis BMB171] gi|29894150|gb|AAP07441.1| Cystine transport system permease protein [Bacillus cereus ATCC 14579] gi|296322233|gb|ADH05161.1| cystine transport system permease protein [Bacillus thuringiensis BMB171] Length = 230 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/218 (34%), Positives = 126/218 (57%), Gaps = 7/218 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + I S+P LL A IV TL + S V+ +IG A RI ++ +++ I H Y+ I Sbjct: 2 FEIFISSYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-NNKVLNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGN 178 Query: 186 YQPLIIYCELAFVYLIL----TSFCYIIQIKIESSVTQ 219 +Q L Y + YLIL T F +++ +++ T Sbjct: 179 FQQLDTYIIVGAYYLILVLLFTYFVNLLEKRLQRKETN 216 >gi|254449912|ref|ZP_05063349.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Octadecabacter antarcticus 238] gi|198264318|gb|EDY88588.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Octadecabacter antarcticus 238] Length = 219 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 112/187 (59%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I PQL + + VT+ + +I++ +G +A+ R ++ IS + F Sbjct: 1 MEWDW-DFCIQILPQL-WEGVKVTIQATILGTMIAMTLGLGLAIAR-RSTNGWISRPVGF 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + + RGTPLLVQL+ +FY LP +G++ A ++ L L++S Y +E+ R+ I +IP G Sbjct: 58 FAELIRGTPLLVQLYFLFYILPDLGLLLSPLTAGVVGLGLHYSTYTAEVYRTGIDAIPSG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+AS A LT +QT HII+PQ I L++ F+++ K T + + IT+ E+ A+ Sbjct: 118 QWEASKATNLTARQTWVHIIIPQAIPPMIPALANYFVAMFKETPLLAAITVLELMNQARS 177 Query: 181 IVSTTYQ 187 + + Y+ Sbjct: 178 VANYHYK 184 >gi|328466492|gb|EGF37635.1| hypothetical protein LM1816_07287 [Listeria monocytogenes 1816] Length = 213 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 124/212 (58%), Gaps = 7/212 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + I + P LL A TL + ++ V S+ +G +AV I + I++ Y+WI R Sbjct: 2 DYITEILPALLDGA-KTTLLVFAVTLVCSIPLGAVVAVGNIS-KIAPLKFILNIYIWIMR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL I+YGLP IG+VFD A+ I+ LN++AY +EI R +SI GQ++++ Sbjct: 60 GTPLLLQLIFIYYGLPIIGVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENGQYESAK 119 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--T 184 +GLT QT++ I+LPQ + + +E I+++K +S+ + I ++ + + +S Sbjct: 120 VLGLTYGQTLQKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDV 179 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 T PL++ +A +YL LT+ I+ ++E Sbjct: 180 TLIPLVL---VAAIYLALTAILTILFKQLEKR 208 >gi|257895699|ref|ZP_05675352.1| amino acid ABC transporter [Enterococcus faecium Com12] gi|257832264|gb|EEV58685.1| amino acid ABC transporter [Enterococcus faecium Com12] Length = 535 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/220 (35%), Positives = 127/220 (57%), Gaps = 17/220 (7%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIG-----FFIAVIRIFFSDTIISLIMH 59 + LI +++ Q L + T+ + ISF ++++IG F +A IR + + Sbjct: 323 FLGLIQNNY-QALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIRA------LRTVAS 375 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV I RG P++V F IF+GLP I G F+A +I+LTLN SAYI+EI+R I ++P Sbjct: 376 IYVDIIRGIPMMVLAFFIFFGLPGIVGFTIPDFIAGVITLTLNASAYIAEIVRGGINAVP 435 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS ++GL+ +T++ IILPQ I ++F+ LK T++ S I + E+ QT Sbjct: 436 VGQMEASRSLGLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTG 495 Query: 179 QRIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIE 214 + IV+ T Q +Y +A +YLI LT +++ K++ Sbjct: 496 KIIVARTTQSTYVYLIIAIMYLILITALTKLAKVLEKKVK 535 >gi|256829242|ref|YP_003157970.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] gi|256578418|gb|ACU89554.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] Length = 268 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/208 (31%), Positives = 118/208 (56%), Gaps = 3/208 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L +VVT + +S ++SL++G + R+ + +++LI YV + RG PLLVQL Sbjct: 59 QFLPDGVVVTFQVTILSIMLSLVLGLITGLGRLS-RNKVLNLIASTYVEVIRGIPLLVQL 117 Query: 75 FVIFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 F I+Y L + D A + ++ + + AY+ E+ R+ I SI KGQ +A+ ++G +R Sbjct: 118 FYIYYALGRLEFFKDLPPMAAAVTAMGICYGAYMGEVFRAGIDSIDKGQAEAARSLGFSR 177 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+ ++ILPQ T P+ +EFI++LK +S+ S + + ++ + + S ++ Y Sbjct: 178 AQTMMYVILPQAWRTILPPVGNEFIALLKDSSLVSILAVSDLLRRGREFASESFMYFEAY 237 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQH 220 +A VYL++T F K+E + + Sbjct: 238 TMVALVYLVITLFLSKAVSKMEQRLNYY 265 >gi|227551702|ref|ZP_03981751.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] gi|227179143|gb|EEI60115.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] Length = 487 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/220 (35%), Positives = 127/220 (57%), Gaps = 17/220 (7%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIG-----FFIAVIRIFFSDTIISLIMH 59 + LI +++ Q L + T+ + ISF ++++IG F +A IR + + Sbjct: 275 FLGLIQNNY-QALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIRA------LRTVAS 327 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV I RG P++V F IF+GLP I G F+A +I+LTLN SAYI+EI+R I ++P Sbjct: 328 IYVDIIRGIPMMVLAFFIFFGLPGIVGFTIPDFIAGVITLTLNASAYIAEIVRGGINAVP 387 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS ++GL+ +T++ IILPQ I ++F+ LK T++ S I + E+ QT Sbjct: 388 VGQMEASRSLGLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTG 447 Query: 179 QRIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIE 214 + IV+ T Q +Y +A +YLI LT +++ K++ Sbjct: 448 KIIVARTTQSTYVYLIIAIMYLILITALTKLAKVLEKKVK 487 >gi|145298524|ref|YP_001141365.1| ABC-type amino acid transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142851296|gb|ABO89617.1| ABC-type amino acid transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 319 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 65/197 (32%), Positives = 123/197 (62%), Gaps = 6/197 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ ++ ++ V ++++G + R+ + + +L + YV + RGTPLLVQ+F++++ Sbjct: 120 GVWVTVKLSLVAGVFAILLGTLAGLARLSPNPALRNLAVT-YVELIRGTPLLVQIFIVYF 178 Query: 80 GLPHIGIVF--DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 IG V D F A + +L + AY++EI+R+ I SI KGQ +A ++GLT QT+R Sbjct: 179 ---FIGTVLNLDRFTAGVAALAVFTGAYVAEIVRAGISSIHKGQMEAGRSLGLTSAQTMR 235 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 ++ILPQ PL+ +FI+++K +S+ S I+I ++ + + +VS+T+ P ++ +A Sbjct: 236 YVILPQAFKRVLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSSTFSPFEVWFTVAL 295 Query: 198 VYLILTSFCYIIQIKIE 214 +YL+LT + ++E Sbjct: 296 LYLVLTGTLSFLVRRLE 312 >gi|317052939|ref|YP_004119293.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316953266|gb|ADU72737.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 221 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 118/204 (57%), Gaps = 4/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y+W F++I +FP LL + VTL + ++ + IIG + + R S I +I Sbjct: 1 MNYQWDFSIIAQNFPVLL-KGLGVTLELWLVAGLSGTIIGLILGMARTN-SRRWIMVITR 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 V +FR TP+L+QL +Y P +GI F +F A ++LTL +AY SEI R+ + SI Sbjct: 59 SVVEVFRNTPVLIQLIWFYYAFPVLVGIQFSTFGAAALALTLYTAAYSSEIFRAGLQSIE 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW+ + A+G++R +R IILPQ L++ I + K TS+AS +T+ E+ Sbjct: 119 RGQWEGAKALGMSRPVALRRIILPQVFRRMLPALTNRMIELAKVTSLASILTVNELMYQG 178 Query: 179 QRIVSTTYQPLIIYCELAFVYLIL 202 + + ST Y+P+ I +A +Y +L Sbjct: 179 RLLSSTYYRPVEILTVVALLYFVL 202 >gi|229042255|ref|ZP_04190007.1| Amino acid ABC transproter, permease [Bacillus cereus AH676] gi|229108024|ref|ZP_04237650.1| Amino acid ABC transproter, permease [Bacillus cereus Rock1-15] gi|229125851|ref|ZP_04254876.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-Cer4] gi|229143144|ref|ZP_04271576.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST24] gi|228640225|gb|EEK96623.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST24] gi|228657509|gb|EEL13322.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-Cer4] gi|228675424|gb|EEL30642.1| Amino acid ABC transproter, permease [Bacillus cereus Rock1-15] gi|228727046|gb|EEL78251.1| Amino acid ABC transproter, permease [Bacillus cereus AH676] Length = 251 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/218 (34%), Positives = 126/218 (57%), Gaps = 7/218 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + I S+P LL A IV TL + S V+ +IG A RI ++ +++ I H Y+ I Sbjct: 23 FEIFISSYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-NNKVLNSIAHVYIAII 80 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 81 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 139 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 140 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGN 199 Query: 186 YQPLIIYCELAFVYLIL----TSFCYIIQIKIESSVTQ 219 +Q L Y + YLIL T F +++ +++ T Sbjct: 200 FQQLDTYIIVGAYYLILVLLFTYFVNLLEKRLQRKETN 237 >gi|149004460|ref|ZP_01829185.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS69] gi|225861279|ref|YP_002742788.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae Taiwan19F-14] gi|147757608|gb|EDK64628.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS69] gi|225727024|gb|ACO22875.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae Taiwan19F-14] gi|332076102|gb|EGI86568.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA41301] Length = 209 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/171 (36%), Positives = 101/171 (59%), Gaps = 11/171 (6%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISE 108 + YVWIFRGTP++VQ+ + F L HI G+ F + I+ +++N AY+SE Sbjct: 36 NLYVWIFRGTPMMVQIMIAF-ALMHINAPTIQIGILGVDFSRLIPGILIISMNSGAYVSE 94 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 +R+ I ++PKGQ +A+Y++G+ K +R++ILPQ + L +EFI+I+K +S+ S Sbjct: 95 TVRAGINAVPKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSA 154 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 I + E++ A + +TTY PL AF YLI+TS + E + Q Sbjct: 155 IGVMELWNGATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQ 205 >gi|327472311|gb|EGF17742.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK408] Length = 521 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 116/206 (56%), Gaps = 11/206 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---------DTIISLIM 58 ++ +++PQ L A +TL I+ + LIIG I V R + I + Sbjct: 284 ILAENWPQFLRGA-GLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFL 342 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ Sbjct: 343 NVYIEIFRGTPMIVQSMVIYYGTAQAFGISIDRTIAAIFIVSINTGAYMSEIVRGGIFAV 402 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 403 DKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFS 462 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 I + TYQ + +A +Y +LT Sbjct: 463 GNTIATQTYQYFQTFTIIAVIYFVLT 488 >gi|323350416|ref|ZP_08086079.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] gi|322123353|gb|EFX95031.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] Length = 521 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 116/206 (56%), Gaps = 11/206 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---------DTIISLIM 58 ++ +++PQ L A +TL I+ + LIIG I V R + I + Sbjct: 284 ILAENWPQFLRGA-GLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFL 342 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ Sbjct: 343 NVYIEIFRGTPMIVQSMVIYYGTAQAFGISIDRTIAAIFIVSINTGAYMSEIVRGGIFAV 402 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 403 DKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFS 462 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 I + TYQ + +A +Y +LT Sbjct: 463 GNTIATQTYQYFQTFTIIAVIYFVLT 488 >gi|324992354|gb|EGC24275.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK405] gi|324996123|gb|EGC28034.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK678] gi|327460583|gb|EGF06918.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1] gi|327488940|gb|EGF20737.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1058] Length = 521 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 116/206 (56%), Gaps = 11/206 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---------DTIISLIM 58 ++ +++PQ L A +TL I+ + LIIG I V R + I + Sbjct: 284 ILAENWPQFLRGA-GLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFL 342 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ Sbjct: 343 NVYIEIFRGTPMIVQSMVIYYGTAQAFGISIDRTIAAIFIVSINTGAYMSEIVRGGIFAV 402 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 403 DKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFS 462 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 I + TYQ + +A +Y +LT Sbjct: 463 GNTIATQTYQYFQTFTIIAAIYFVLT 488 >gi|229010073|ref|ZP_04167287.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides DSM 2048] gi|228751206|gb|EEM01018.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides DSM 2048] Length = 214 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 67/163 (41%), Positives = 104/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A I+ V+S IIG I ++R + ++S I+ F V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVIGILR-YTKIPVVSQILGFIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|229089704|ref|ZP_04220965.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-42] gi|228693603|gb|EEL47305.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-42] Length = 214 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/163 (40%), Positives = 104/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + + S I+ F V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGIVR-YTKIPVFSQILGFIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A+I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQ 176 >gi|262282395|ref|ZP_06060163.1| glutamine ABC transporter permease and substrate binding protein [Streptococcus sp. 2_1_36FAA] gi|262261686|gb|EEY80384.1| glutamine ABC transporter permease and substrate binding protein [Streptococcus sp. 2_1_36FAA] Length = 485 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 124/219 (56%), Gaps = 9/219 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 L+ +++PQLL VT+ +A +SF I+L+IG + + + I +V + Sbjct: 268 LGLLKNNYPQLL-KGFGVTIALALLSFAIALVIGIIFGMFSVSPYKPL-RWIAEIFVDVI 325 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RG PL++ IF+G+P++ + FVA I+L+LN AYI+EI+R I ++P Sbjct: 326 RGVPLMILAAFIFWGIPNLIESITNQQSPINDFVAGTIALSLNSGAYIAEIVRGGIQAVP 385 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+FQT Sbjct: 386 VGQMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLVELFQTG 445 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + I++ YQ +Y LA +YL++ +F + ++E + Sbjct: 446 KNIIARNYQSFRMYAILAVLYLLIITFLTRLAKRLEKRI 484 >gi|170016959|ref|YP_001727878.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum KM20] gi|169803816|gb|ACA82434.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Leuconostoc citreum KM20] Length = 491 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 115/193 (59%), Gaps = 3/193 (1%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + L ++TL +A ++ VI I+G A+ ++ + ++ + + YV RGTPLL Sbjct: 282 KYGNLFIKGTLITLALAAVAVVIGSILGTVFALFKLS-PNFLLKAVGNIYVEYVRGTPLL 340 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 VQ F++F+G IG+ SF A +++ LN +AY++EIIRS I S+ GQ +A+ ++GL+ Sbjct: 341 VQAFMVFFGTQVIGLNLSSFAAGALAMGLNSAAYVAEIIRSGINSVNYGQTEAARSLGLS 400 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVSTTYQPLI 190 + +T+R IILPQ I L +EF++++K SV S I + E+ FQT + +++P Sbjct: 401 KGKTMRFIILPQAIKNILPALGNEFVTVIKEGSVVSVIGVGELMFQTG-VVQGASFKPFF 459 Query: 191 IYCELAFVYLILT 203 + +Y +LT Sbjct: 460 PLLITSMIYFVLT 472 >gi|313618407|gb|EFR90430.1| arginine transport system permease protein ArtQ [Listeria innocua FSL S4-378] Length = 229 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 109/181 (60%), Gaps = 4/181 (2%) Query: 1 MKYEWFNL--IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 +K E N+ I++ P LL A TL + ++ V S+ +G +AV I + I+ Sbjct: 10 VKKERNNMDYIMEILPALLDGA-KTTLLVFVVTLVCSIPLGAIVAVGNIS-KIAPLKFIL 67 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 + Y+WI RGTPLL+QL I+YGLP IG+VFD A+ I+ LN++AY +EI R +SI Sbjct: 68 NIYIWIMRGTPLLLQLIFIYYGLPIIGVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIE 127 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ++++ +GLT QT+R I+LPQ + + +E I+++K +S+ + I ++ + Sbjct: 128 NGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAG 187 Query: 179 Q 179 + Sbjct: 188 K 188 >gi|227872730|ref|ZP_03991055.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] gi|227841425|gb|EEJ51730.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] Length = 229 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 73/220 (33%), Positives = 121/220 (55%), Gaps = 5/220 (2%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHF 60 + NL+ D + TL I + VI + +GF I ++R + T I + I F Sbjct: 8 YMNLVQDKRYLYFLEGLKNTLIITFFALVIGVALGFIIGMVRSTYDRTGKGKIANGICQF 67 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ I RGTP ++QL + +Y + I FV II + LN +AY++EIIRS I+SIPKG Sbjct: 68 YLTIMRGTPAVIQLMIFYYCIFTSRIFSGVFVGII-AFGLNSAAYVAEIIRSGIMSIPKG 126 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A ++G + +T+R+II+PQ + + +EFI ++K T+VA + + ++ + Sbjct: 127 QMEAGRSLGFSYGETMRYIIMPQAVRNVLPAIFNEFIVLIKETAVAGYVAVQDLTKAGDI 186 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + S TY +A +YLILT F ++ K+E + + Sbjct: 187 VRSRTYDSWTPLLTVALIYLILTMFFSFLEKKMEEAFQRK 226 >gi|118473444|ref|YP_889564.1| glutamine ABC transporter permease/substrate-binding protein [Mycobacterium smegmatis str. MC2 155] gi|118174731|gb|ABK75627.1| glutamine ABC transporter, permease/substrate-binding protein [Mycobacterium smegmatis str. MC2 155] Length = 468 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 119/199 (59%), Gaps = 3/199 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 + L+ +FP +L + +TL + +S I+L++G ++R+ S ++ I YV I Sbjct: 255 FLGLLKSTFP-ILMIGLRMTLILTVVSIAIALVLGVIFGLLRVSRS-VVLRAIGTTYVDI 312 Query: 65 FRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTPLLVQ F I++G+P +G + A II+L+LN AY++EI+R I S+ KGQ + Sbjct: 313 FRGTPLLVQAFFIYFGIPSALGFQMSALTAGIITLSLNAGAYMTEIVRGGIQSVDKGQME 372 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++G+ T+R +ILPQ I T ++F+ LK TS+ S I I E+ QT + I++ Sbjct: 373 AARSLGIGYLPTMRKVILPQAIRTMIPSYINQFVITLKDTSILSVIGIAELTQTGRIIIA 432 Query: 184 TTYQPLIIYCELAFVYLIL 202 +Q ++ + +Y ++ Sbjct: 433 RNFQSFTMWLIIGIIYFVV 451 >gi|269926020|ref|YP_003322643.1| polar amino acid ABC transporter, inner membrane subunit [Thermobaculum terrenum ATCC BAA-798] gi|269789680|gb|ACZ41821.1| polar amino acid ABC transporter, inner membrane subunit [Thermobaculum terrenum ATCC BAA-798] Length = 246 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/196 (35%), Positives = 119/196 (60%), Gaps = 4/196 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 +T+ ++ +S ++ +++G A+ RI S + I FY+W+FRGTPLLVQ+ +++ + Sbjct: 23 LTIFLSVVSQLLGILLGLVAALGRISHSRIPVFRWISGFYIWLFRGTPLLVQIIFVYFAI 82 Query: 82 PHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 P + +V + II+L+LN AY++EIIR+ I+S+ GQ +A+ ++G+TR +R Sbjct: 83 PQLTNQRVVIPEVPSAIIALSLNEGAYMAEIIRAGILSVEGGQMEAALSLGMTRWLAMRR 142 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 IILPQ I P +EFIS+LK+TS+ + I+ E+ Q I S T++ + + Sbjct: 143 IILPQAIRIIIPPTGNEFISMLKNTSLVAVISAHELLFATQEIYSATFRYFELLTIASLW 202 Query: 199 YLILTSFCYIIQIKIE 214 YL +T+ +Q K+E Sbjct: 203 YLAMTTVASYLQGKLE 218 >gi|228950910|ref|ZP_04113032.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228808758|gb|EEM55255.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 251 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 126/218 (57%), Gaps = 7/218 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + I ++P LL A IV TL + S V+ +IG A RI ++ +++ I H Y+ I Sbjct: 23 FEIFISTYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-NNKVLNSIAHIYIAII 80 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + IVF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 81 RGTPLIVQIAILYFGITSV-IVFSPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 139 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 140 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGN 199 Query: 186 YQPLIIYCELAFVYLIL----TSFCYIIQIKIESSVTQ 219 +Q L Y + YL+L T F +++ +++ T Sbjct: 200 FQQLDTYIIVGVYYLVLVLLFTYFVNLLEKRLQRKETN 237 >gi|315925537|ref|ZP_07921747.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315621078|gb|EFV01049.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 216 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/172 (39%), Positives = 106/172 (61%), Gaps = 12/172 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 A + TL + I ++SL +GF I ++ R+ + I YV+I RGTPLL+QLF Sbjct: 13 AGLGKTLSLFAICLIVSLPLGFGITMMLRSRV----RPVKAIAEIYVYILRGTPLLLQLF 68 Query: 76 VIFYGLPHI-GI----VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 +++GLP I GI +FD F A ++ LN++AY +EI R +++I GQ++A+ +GL Sbjct: 69 FVYFGLPFIPGIGKVLMFDRFTAACVAFALNYAAYFAEIFRGGLLAINDGQYEAAKVLGL 128 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 TR QT+ HII+PQ I S +S+E I ++K T++ + I +PEI A+ V Sbjct: 129 TRGQTMLHIIIPQMIRVSLPSVSNETIVLVKDTALVTAIAVPEIMYYAKGAV 180 >gi|302558467|ref|ZP_07310809.1| arginine/ornithine transporter [Streptomyces griseoflavus Tu4000] gi|302476085|gb|EFL39178.1| arginine/ornithine transporter [Streptomyces griseoflavus Tu4000] Length = 326 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 123/208 (59%), Gaps = 22/208 (10%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + +S VI + G +AV+R+ + + S + FY+W FRGTP+LVQLFV F + Sbjct: 90 TLLLTVLSMVIGIAGGILLAVMRLS-KNPVTSSLAWFYIWFFRGTPVLVQLFVWF----N 144 Query: 84 IGIVFD-------------SFV----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 +G+VF+ SF+ ++ L LN +AY+SEI R+ ++S+ +GQ +AS+ Sbjct: 145 LGLVFEYINLGPVYKDYWASFMTPLLTALLGLGLNEAAYMSEICRAGLLSVDEGQTEASH 204 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G++ +T+R I++PQ + P +E I++LK+TS+ S + ++FQ A+ I + Sbjct: 205 ALGMSHTKTLRRIVVPQAMRVIVPPTGNEVINMLKTTSLVSAVQFADLFQEAKDIGQNSG 264 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIE 214 P+ +Y A YLI+TS + Q IE Sbjct: 265 SPVEMYFLAAAWYLIMTSILSVGQYYIE 292 >gi|257887162|ref|ZP_05666815.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257898269|ref|ZP_05677922.1| amino acid ABC transporter [Enterococcus faecium Com15] gi|257823216|gb|EEV50148.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257836181|gb|EEV61255.1| amino acid ABC transporter [Enterococcus faecium Com15] Length = 535 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/220 (35%), Positives = 127/220 (57%), Gaps = 17/220 (7%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIG-----FFIAVIRIFFSDTIISLIMH 59 + LI +++ Q L + T+ + ISF ++++IG F +A IR + + Sbjct: 323 FLGLIQNNY-QALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIRA------LRTVAS 375 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV I RG P++V F IF+GLP I G F+A +I+LTLN SAYI+EI+R I ++P Sbjct: 376 IYVDIIRGIPMMVLAFFIFFGLPGIVGFTIPDFIAGVITLTLNASAYIAEIVRGGINAVP 435 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS ++GL+ +T++ IILPQ I ++F+ LK T++ S I + E+ QT Sbjct: 436 VGQMEASRSLGLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTG 495 Query: 179 QRIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIE 214 + IV+ T Q +Y +A +YLI LT +++ K++ Sbjct: 496 KIIVARTTQSTYVYLIIAIMYLILITALTKLAKVLEKKVK 535 >gi|91780725|ref|YP_555932.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693385|gb|ABE36582.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] Length = 221 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 128/219 (58%), Gaps = 6/219 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y + I+ L I +TL + +S ++++IG I ++RI S ++ + Sbjct: 1 MNYHFHWGIVGQNLGYLLHGIWLTLAVTAVSLAVAIVIGLVIGIMRIS-SKGVLKRVAGV 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV +FR TP LVQL ++Y LP + GI + I +L++N +AY++EI R+ I ++P Sbjct: 60 YVEVFRNTPTLVQLIWVYYCLPVLTGINLSPTSSCIFALSINSAAYVAEIFRAGIQAVPS 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ +IG++ + +R IILPQ + P +EF+S+LK +S+ S + + ++ AQ Sbjct: 120 GQLEAARSIGMSYSKAMRKIILPQAVRQMIPPFVNEFVSLLKYSSLVSVLGVADLTYQAQ 179 Query: 180 RIVSTTYQPLIIYCELAFVYLIL----TSFCYIIQIKIE 214 + +TT++P+ I+ + VY +L ++ ++++ KI Sbjct: 180 TLSTTTFRPIEIFTFIGVVYFLLCWAISAAAHVLEQKIR 218 >gi|325695641|gb|EGD37541.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK150] Length = 521 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 116/206 (56%), Gaps = 11/206 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---------DTIISLIM 58 ++ +++PQ L A +TL I+ + LIIG I V R + I + Sbjct: 284 ILAENWPQFLRGA-GLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFL 342 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ Sbjct: 343 NVYIEIFRGTPMIVQSMVIYYGTAQAFGISIDRTIAAIFIVSINTGAYMSEIVRGGIFAV 402 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 403 DKGQFEAATALGMTHSQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFS 462 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 I + TYQ + +A +Y +LT Sbjct: 463 GNTIATQTYQYFQTFTIIAVIYFVLT 488 >gi|209693641|ref|YP_002261569.1| putative amino-acid ABC transporter, permease protein [Aliivibrio salmonicida LFI1238] gi|208007592|emb|CAQ77692.1| putative amino-acid ABC transporter, permease protein [Aliivibrio salmonicida LFI1238] Length = 223 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 62/154 (40%), Positives = 99/154 (64%), Gaps = 3/154 (1%) Query: 49 FSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAY 105 F ++ + Y+ FRGTPLLVQLF+++YGLP + +F D+F A +I LTL+F+AY Sbjct: 46 FKVPVLDQLSQLYISFFRGTPLLVQLFLLYYGLPQVFPIFVGLDAFSAAVIGLTLHFAAY 105 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 ++E IR++II + + Q +AS +IG+T Q +R IILPQ + L + FI ++KSTS+ Sbjct: 106 MAESIRAAIIGVDRSQMEASLSIGMTTSQAMRRIILPQATRIALPSLMNYFIDMIKSTSL 165 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 A T+ + EI AQ S++++ + +A +Y Sbjct: 166 AFTLGVSEIMAKAQMEASSSFKFFEAFLAVALIY 199 >gi|93005160|ref|YP_579597.1| amino acid ABC transporter permease [Psychrobacter cryohalolentis K5] gi|92392838|gb|ABE74113.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Psychrobacter cryohalolentis K5] Length = 241 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/232 (34%), Positives = 132/232 (56%), Gaps = 15/232 (6%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + W +I D P LL A V+T+ + S +I L G +A++R+ + ++ + Sbjct: 1 MDWNW-QVIFDHIPDLLGGA-VLTVQLVLFSGIIGLFFGLVLALLRLS-KNWVVQIFPFL 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV----------AIIISLTLNFSAYISEII 110 Y++ FRGTPLLVQ+F+I+YGL V +SF+ II+ TLN SAY++EII Sbjct: 58 YIFFFRGTPLLVQIFLIYYGLGQFEAVRNSFLWEPVLSQAYWCAIIAFTLNTSAYLAEII 117 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R +I +IP G+ +A+ AIG+++ Q + I LP+ S+E I +LK +++ASTI Sbjct: 118 RGAIQNIPVGELEAADAIGMSKWQKLTRITLPRAFGIVIPAYSNEVIFMLKGSALASTIA 177 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKI-ESSVTQHT 221 + +I A+ I + TY + ++ VYL+L S+ + ++ E + +H Sbjct: 178 LMDITGVARTISARTYTLMELFFAAGIVYLLL-SWVILFSFRMFEKRMNRHA 228 >gi|322834313|ref|YP_004214340.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321169514|gb|ADW75213.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 274 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 121/210 (57%), Gaps = 7/210 (3%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL-IMHFYVWIFRGTP 69 D F Q I++T AC S L+IG A+ R+ S+ ++ FY +FRGTP Sbjct: 67 DGFIQGAALTIMIT---AC-SMFFCLLIGLITALGRM--SENALAFGCATFYASLFRGTP 120 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LLVQ+ +I+ LP +GIV + + II+L++N+ AY++E IRS ++S+P+GQ +A+ A+G Sbjct: 121 LLVQVLIIYLALPQVGIVLGALSSGIIALSMNYGAYLAETIRSGVLSVPRGQQEAALALG 180 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 ++R H+ PQ + P S FIS+LK +S+ S + + E+ AQ +TY+ + Sbjct: 181 VSRWTVAVHVTAPQALRIIIPPAGSMFISMLKDSSLVSLMGLWELNFLAQSYGRSTYRYM 240 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + A +Y I++ ++Q ++E Q Sbjct: 241 EMLATAAAIYWIMSIVLELLQSRLERRFAQ 270 >gi|306833827|ref|ZP_07466952.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] gi|304424021|gb|EFM27162.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] Length = 739 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 70/216 (32%), Positives = 127/216 (58%), Gaps = 9/216 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + L+ +++ QLL A + TL + ISF I+++IG ++ + + ++ I +V I Sbjct: 522 WGLLKNNYSQLL-AGLGKTLSLTLISFAIAMVIGIIFGMMAVA-PNKVLRTISAVFVDIV 579 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RG PL++ IF+G+P++ + FVA I+L+LN AYI+EI+R I ++P Sbjct: 580 RGIPLMIVAAFIFWGIPNLLESITGRQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVP 639 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +AS ++G++ +T++ IILPQ I ++F+ LK T++ S I + E+FQT Sbjct: 640 QGQMEASRSLGISYGKTMQKIILPQAIRLMLPNFINQFVISLKDTTIVSAIGLVELFQTG 699 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + I++ YQ +Y LA +YL++ + + ++E Sbjct: 700 KIIIARNYQSFRVYAILAVIYLVMITLLTRLAKRLE 735 >gi|229068107|ref|ZP_04201414.1| Amino acid ABC transproter, permease [Bacillus cereus F65185] gi|229077711|ref|ZP_04210341.1| Amino acid ABC transproter, permease [Bacillus cereus Rock4-2] gi|229176944|ref|ZP_04304339.1| Amino acid ABC transproter, permease [Bacillus cereus 172560W] gi|228606419|gb|EEK63845.1| Amino acid ABC transproter, permease [Bacillus cereus 172560W] gi|228705652|gb|EEL58008.1| Amino acid ABC transproter, permease [Bacillus cereus Rock4-2] gi|228714921|gb|EEL66789.1| Amino acid ABC transproter, permease [Bacillus cereus F65185] Length = 251 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 126/218 (57%), Gaps = 7/218 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + I ++P LL A IV TL + S V+ +IG A RI ++ +++ I H Y+ I Sbjct: 23 FEIFISTYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-NNKVLNSIAHIYIAII 80 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + IVF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 81 RGTPLIVQIAILYFGITSV-IVFSPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 139 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 140 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGN 199 Query: 186 YQPLIIYCELAFVYLIL----TSFCYIIQIKIESSVTQ 219 +Q L Y + YL+L T F +++ +++ T Sbjct: 200 FQQLDTYIIVGVYYLVLVLLFTYFVNLLEKRLQRKETN 237 >gi|206967600|ref|ZP_03228556.1| putative amino acid ABC transporter, permease protein [Bacillus cereus AH1134] gi|229188623|ref|ZP_04315662.1| Amino acid ABC transproter, permease [Bacillus cereus ATCC 10876] gi|206736520|gb|EDZ53667.1| putative amino acid ABC transporter, permease protein [Bacillus cereus AH1134] gi|228594812|gb|EEK52592.1| Amino acid ABC transproter, permease [Bacillus cereus ATCC 10876] Length = 230 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 126/218 (57%), Gaps = 7/218 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + I ++P LL A IV TL + S V+ +IG A RI ++ +++ I H Y+ I Sbjct: 2 FEIFISTYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-NNKVLNSIAHIYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + IVF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSV-IVFSPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGN 178 Query: 186 YQPLIIYCELAFVYLIL----TSFCYIIQIKIESSVTQ 219 +Q L Y + YL+L T F +++ +++ T Sbjct: 179 FQQLDTYIIVGVYYLVLVLLFTYFVNLLEKRLQRKETN 216 >gi|257455729|ref|ZP_05620957.1| octopine transport system permease protein OccM [Enhydrobacter aerosaccus SK60] gi|257446857|gb|EEV21872.1| octopine transport system permease protein OccM [Enhydrobacter aerosaccus SK60] Length = 241 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 80/232 (34%), Positives = 132/232 (56%), Gaps = 16/232 (6%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + W +IIDS P+LL +I+ T+ + +S ++ ++ +A+ R+ + +L Sbjct: 1 MNWNW-QIIIDSIPKLLQGSII-TIELVVLSGLLGFMLAVPLALARLSKKPWVQALPFA- 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-----------GIVFDSFVAIIISLTLNFSAYISEI 109 Y++ FRGTPLLVQ+F+I+YGL G++ F II+ TLN +AY +EI Sbjct: 58 YIFFFRGTPLLVQIFLIYYGLSQFKWVTESVLWKSGVLASPFWCAIIAFTLNTAAYTAEI 117 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IR +I SIPKG+ +A+ AIG++ Q +R II P+ +E I +LK +++ASTI Sbjct: 118 IRGAIKSIPKGENEAADAIGMSYSQKLRRIIFPRAFGIMLPAYGNEVIFMLKGSALASTI 177 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKI-ESSVTQH 220 T+ +I A I+S TY ++ +YL+L S+ I ++ E + +H Sbjct: 178 TLMDITGVATTIMSKTYTVFELFFASGIIYLLL-SWLLIGMFRLAEKRINRH 228 >gi|254472990|ref|ZP_05086388.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062] gi|211957711|gb|EEA92913.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062] Length = 199 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 62/164 (37%), Positives = 105/164 (64%), Gaps = 6/164 (3%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 +A +S +++LI+ A+IR+ ++ ++ FRGTPLLVQLF+ +YGLP + + Sbjct: 1 MASVSMILALILASLFAIIRVV-RFPVLDAATRLFISFFRGTPLLVQLFLFYYGLPQL-V 58 Query: 87 VF----DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 F D A I+ LTL+FSAY++E IR++I+ + + QW+A+ +IG++ Q +R IILP Sbjct: 59 SFLTAIDGVTAAIVGLTLHFSAYMAESIRAAILGVDRSQWEAAKSIGMSTGQMMRRIILP 118 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 Q +A L + FI ++KSTS+A T+ + E+ AQ+ + ++ Sbjct: 119 QAARVAAPTLINYFIDLIKSTSLAFTLGVTELMGAAQKEAAGSF 162 >gi|228970534|ref|ZP_04131184.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228789121|gb|EEM37050.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar thuringiensis str. T01001] Length = 230 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 126/218 (57%), Gaps = 7/218 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + I S+P LL A IV TL + S V+ +IG A RI ++ +++ I H Y+ I Sbjct: 2 FEIFISSYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-NNKVLNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGN 178 Query: 186 YQPLIIYCELAFVYLIL----TSFCYIIQIKIESSVTQ 219 +Q L Y + YL+L T F +++ +++ T Sbjct: 179 FQQLDTYIIVGAYYLVLVLLFTYFVNLLEKRLQRKETN 216 >gi|325848662|ref|ZP_08170240.1| ABC transporter, permease protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480664|gb|EGC83724.1| ABC transporter, permease protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 529 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/204 (35%), Positives = 117/204 (57%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-----------IISLIMHF 60 + L I TL I+ IS +I IG +AVIR D II+ I+ Sbjct: 296 EYSSLFINGIFSTLFISIISTIIGFFIGLVVAVIRKTNVDKNKNIIGYVLQKIINFILAA 355 Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ IFRGTP++VQ +IFYG + I + +A I +++N AY++E++R I S+ + Sbjct: 356 YIEIFRGTPMMVQAILIFYGAKQFLAIDMSTMLAAFIIVSINTGAYLAEVVRGGINSVDE 415 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A A+G+T QT+ ++++PQTI + +++EF+ +K TSV + I++ E+F ++ Sbjct: 416 GQFEACKALGMTHSQTMFNVVIPQTIKSILPAIANEFVVNIKDTSVLNVISVTELFFVSK 475 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I +TYQ Y A +Y ILT Sbjct: 476 SIAGSTYQIFQTYLITAIIYFILT 499 >gi|186477119|ref|YP_001858589.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phymatum STM815] gi|184193578|gb|ACC71543.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 218 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/194 (36%), Positives = 115/194 (59%), Gaps = 16/194 (8%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTIISLIMHFYV 62 ID P LL A V+T+ I +FV+S I+G +A++++ F T+I+LI Sbjct: 7 IDFLPILLKGA-VITIEITACAFVLSSILGLVLALLKVSRNRAASTFGSTVINLI----- 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RG P++VQLF I++ LP +G+ +F A +I L + +SAY +E R+ I +I GQ Sbjct: 61 ---RGLPIIVQLFYIYFVLPDLGVQLSAFQAGVIGLGIAYSAYQAENFRAGIEAIDHGQI 117 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A++AIG+ +R ++LPQ + P + + +LK +SVASTIT+ EI + Q I Sbjct: 118 EAAHAIGMRGPLIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVASTITVAEITRAGQLIA 177 Query: 183 STTYQPLIIYCELA 196 S+T+Q + +Y +A Sbjct: 178 SSTFQNMTVYTLVA 191 >gi|228919286|ref|ZP_04082656.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840393|gb|EEM85664.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 251 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 126/218 (57%), Gaps = 7/218 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + I ++P LL A IV TL + S V+ +IG A RI ++ +++ I H Y+ I Sbjct: 23 FEIFISTYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-NNKVLNSIAHIYIAII 80 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + IVF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 81 RGTPLIVQIAILYFGITSV-IVFSPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 139 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 140 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGN 199 Query: 186 YQPLIIYCELAFVYLIL----TSFCYIIQIKIESSVTQ 219 +Q L Y + YL+L T F +++ +++ T Sbjct: 200 FQQLDTYIIVGVYYLVLVLLFTYFVNLLEKRLQRKETN 237 >gi|224541408|ref|ZP_03681947.1| hypothetical protein CATMIT_00570 [Catenibacterium mitsuokai DSM 15897] gi|224525654|gb|EEF94759.1| hypothetical protein CATMIT_00570 [Catenibacterium mitsuokai DSM 15897] Length = 242 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/229 (31%), Positives = 129/229 (56%), Gaps = 14/229 (6%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF-----------FS 50 +Y W LI +++P L + I +T+ A + + L++G I IR F Sbjct: 6 QYAWSQLI-NNWP-LFWYGIKMTIAFAVVGTLAGLVLGLVIGAIRCVPLDPLDKPVTRFF 63 Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEII 110 + I FYVW+FRGTP++VQ ++Y + + +++F A ++ +++N +AY++EII Sbjct: 64 KQLGRFITGFYVWVFRGTPMMVQAVFLYYLFKPV-LNWNNFTAGMVIISINTAAYMAEII 122 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 RS I SI GQ +A+ ++G+T QT+ +II PQ I + L ++FI +K + + + I+ Sbjct: 123 RSGIQSIDAGQMEAAKSLGMTNTQTMINIIFPQAIKNTFPSLGNQFIVNIKDSCMLNAIS 182 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + E+F AQ + T + + +Y +A +YLILT+ + IE + + Sbjct: 183 VVELFFQAQSVAGTNMRYIEVYLVVAILYLILTTVATFVLNYIEKKINK 231 >gi|228937645|ref|ZP_04100282.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228977104|ref|ZP_04137505.1| Amino acid ABC transproter, permease [Bacillus thuringiensis Bt407] gi|228782552|gb|EEM30729.1| Amino acid ABC transproter, permease [Bacillus thuringiensis Bt407] gi|228822019|gb|EEM68010.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 251 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 126/218 (57%), Gaps = 7/218 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + I S+P LL A IV TL + S V+ +IG A RI ++ +++ I H Y+ I Sbjct: 23 FEIFISSYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-NNKVLNSIAHVYIAII 80 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 81 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 139 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 140 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGN 199 Query: 186 YQPLIIYCELAFVYLIL----TSFCYIIQIKIESSVTQ 219 +Q L Y + YL+L T F +++ +++ T Sbjct: 200 FQQLDTYIIVGAYYLVLVLLFTYFVNLLEKRLQRKETN 237 >gi|254248453|ref|ZP_04941773.1| hypothetical protein BCPG_03284 [Burkholderia cenocepacia PC184] gi|124874954|gb|EAY64944.1| hypothetical protein BCPG_03284 [Burkholderia cenocepacia PC184] Length = 235 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 65/188 (34%), Positives = 114/188 (60%), Gaps = 2/188 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 +F ID P LL A VVT+ I +FV+S ++G +A++++ + ++ V + Sbjct: 12 FFQNAIDFLPILLKGA-VVTIEITACAFVLSSVLGLILALMKVS-RNRAVATAGSTIVNV 69 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RG P++VQLF +++ LP +G+ +F A ++ L + +SAY +E R+ I +I +GQ +A Sbjct: 70 IRGLPIIVQLFYMYFVLPDLGVQLSAFQAGVLGLGIAYSAYQAENFRAGIEAIDRGQIEA 129 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++AIG+ +R ++LPQ + P + + +LK +SVASTIT+ EI + Q I S+ Sbjct: 130 AHAIGMRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVASTITVAEITRAGQLIASS 189 Query: 185 TYQPLIIY 192 T+Q + +Y Sbjct: 190 TFQNMSVY 197 >gi|296158006|ref|ZP_06840839.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295891774|gb|EFG71559.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 222 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 74/198 (37%), Positives = 127/198 (64%), Gaps = 1/198 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ +I +P ++ +V T+ + S +S ++G I + R+ ++ Y+ F Sbjct: 5 FSPVIAGWPDIMRGTLV-TVEVTAASLALSCVLGLLIGIGRLTPKRRMVYGFCTAYLTFF 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF++F+GLP GI+ +FV ++ L L +AY+SEI+R +I S+ +GQ +A+ Sbjct: 64 RGTPLLVQLFLLFFGLPQFGILLPAFVCGMLGLGLYSAAYVSEIVRGAIQSVDRGQMEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IG++ Q +R IILPQ I PL +EFI+++K++++ S +TI ++ Q+I+S + Sbjct: 124 RSIGMSSGQAMRAIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIDDLMHEGQKIISVS 183 Query: 186 YQPLIIYCELAFVYLILT 203 Y+ L +Y +A VYL+LT Sbjct: 184 YRSLEVYLAIALVYLVLT 201 >gi|91778080|ref|YP_553288.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91690740|gb|ABE33938.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] Length = 222 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 74/198 (37%), Positives = 127/198 (64%), Gaps = 1/198 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ +I +P ++ +V T+ + S +S ++G I + R+ ++ Y+ F Sbjct: 5 FSPVIAGWPDIMRGTLV-TVEVTAASLALSCVLGLLIGIGRLTPKRRMVYGFCTAYLTFF 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF++F+GLP GI+ +FV ++ L L +AY+SEI+R +I S+ +GQ +A+ Sbjct: 64 RGTPLLVQLFLLFFGLPQFGILLPAFVCGMLGLGLYSAAYVSEIVRGAIQSVDRGQMEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IG++ Q +R IILPQ I PL +EFI+++K++++ S +TI ++ Q+I+S + Sbjct: 124 RSIGMSAGQAMRAIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIDDLMHEGQKIISVS 183 Query: 186 YQPLIIYCELAFVYLILT 203 Y+ L +Y +A VYL+LT Sbjct: 184 YRSLEVYLAIALVYLVLT 201 >gi|71064875|ref|YP_263602.1| ABC basic amino acid transporter, inner membrane subunit [Psychrobacter arcticus 273-4] gi|71037860|gb|AAZ18168.1| ABC basic amino acid transporter, inner membrane subunit [Psychrobacter arcticus 273-4] Length = 241 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 80/232 (34%), Positives = 133/232 (57%), Gaps = 15/232 (6%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + W +I D P LL A V+T+ + S VI L G +A++R+ + ++ ++ Sbjct: 1 MDWNW-QVIFDHIPDLLGGA-VLTVQLVIFSGVIGLFFGLVLALLRLS-KNWMVQILPFL 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV----------AIIISLTLNFSAYISEII 110 Y++ FRGTPLLVQ+F+I+YGL V +SF+ II+ TLN SAY++EII Sbjct: 58 YIFFFRGTPLLVQIFLIYYGLGQFEAVRESFLWEPVLSQAYWCAIIAFTLNTSAYLAEII 117 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R +I +IP G+ +A+ AIG+++ Q + I LP+ S+E I +LK +++ASTI Sbjct: 118 RGAIQNIPVGELEAADAIGMSKWQKLTRITLPRAFGIVIPVYSNEVIFMLKGSALASTIA 177 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKI-ESSVTQHT 221 + +I A+ I + TY + ++ VYL+L S+ + ++ E + +H Sbjct: 178 LMDITGVARTISARTYTLMELFFAAGIVYLLL-SWVILFSFRMFEKRMNRHA 228 >gi|30260796|ref|NP_843173.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47525921|ref|YP_017270.1| amino acid ABC transporter permease [Bacillus anthracis str. 'Ames Ancestor'] gi|49183634|ref|YP_026886.1| amino acid ABC transporter permease [Bacillus anthracis str. Sterne] gi|49480225|ref|YP_034900.1| glutamine ABC transporter permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65318068|ref|ZP_00391027.1| COG0765: ABC-type amino acid transport system, permease component [Bacillus anthracis str. A2012] gi|165872943|ref|ZP_02217566.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|167635139|ref|ZP_02393455.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|167640927|ref|ZP_02399185.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|170689042|ref|ZP_02880242.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|170708502|ref|ZP_02898944.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|177652796|ref|ZP_02935169.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|190568586|ref|ZP_03021492.1| amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|196041862|ref|ZP_03109151.1| amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] gi|227816488|ref|YP_002816497.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|229599982|ref|YP_002865240.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] gi|254684281|ref|ZP_05148141.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CNEVA-9066] gi|254722085|ref|ZP_05183874.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A1055] gi|254738745|ref|ZP_05196448.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Western North America USA6153] gi|254742043|ref|ZP_05199730.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Kruger B] gi|254754971|ref|ZP_05207005.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Vollum] gi|254762298|ref|ZP_05214142.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Australia 94] gi|30254245|gb|AAP24659.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47501069|gb|AAT29745.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49177561|gb|AAT52937.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Sterne] gi|49331781|gb|AAT62427.1| ABC transporter, permease; probable glutamine ABC transporter, permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164711297|gb|EDR16851.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|167511147|gb|EDR86535.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|167529398|gb|EDR92149.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|170126623|gb|EDS95508.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|170667027|gb|EDT17790.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|172081830|gb|EDT66899.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|190560380|gb|EDV14359.1| amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|196027356|gb|EDX65974.1| amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] gi|227005796|gb|ACP15539.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|229264390|gb|ACQ46027.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] Length = 214 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 104/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + ++S ++ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILR-YMKIPVVSQVLGIIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A+I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQ 176 >gi|313623357|gb|EFR93582.1| probable amino-acid ABC transporter permease protein YckA [Listeria innocua FSL J1-023] Length = 213 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/173 (36%), Positives = 105/173 (60%), Gaps = 2/173 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + I++ P LL A TL + ++ V S+ +G +AV I + I++ Y+WI R Sbjct: 2 DYIMEILPALLDGA-KTTLLVFVVTLVCSIPLGAIVAVGNIS-KIAPLKFILNIYIWIMR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL I+YGLP IGIVFD A+ I+ LN++AY +EI R +SI GQ++++ Sbjct: 60 GTPLLLQLIFIYYGLPIIGIVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENGQYESAK 119 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +GLT QT+R I+LPQ + + +E I+++K +S+ + I ++ + + Sbjct: 120 VLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGK 172 >gi|229074426|ref|ZP_04207458.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock4-18] gi|228708710|gb|EEL60851.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock4-18] Length = 214 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 66/163 (40%), Positives = 104/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + ++S I+ F V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILR-YTKIPVVSQILGFIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|27382316|ref|NP_773845.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27355487|dbj|BAC52470.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 303 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 122/220 (55%), Gaps = 14/220 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 IV T+ +A ++ ++ + +G +A++R+ + ++ + Y W+FRGTPL++QL + F Sbjct: 85 GIVNTMVMAVLAMMLGIFLGIVVAIMRLS-PNPVLKTVAAGYTWLFRGTPLILQLLLWFN 143 Query: 80 ---GLPHIGI----------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P IGI V F+A ++ L +N AY SE++R+ ++S+ GQ++A+ Sbjct: 144 LALVFPTIGIPGLWSARAVDVMTPFLAALLGLGINQGAYTSEVMRAGMLSVDIGQYEAAQ 203 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 AIG+ R + +R I+LPQ + PL +EFI ++K+TS+AS I PE+ A+ I Sbjct: 204 AIGMGRLRALRRIVLPQAMRVVIPPLGNEFIGMVKATSLASVIQYPELLHNAENIYYANS 263 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 + + + YL++ S +Q+ +E + T + + Sbjct: 264 RVIELLIVAGLWYLLVVSILTPLQMLLERRFARGTLRLAR 303 >gi|107026377|ref|YP_623888.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116692434|ref|YP_837967.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|105895751|gb|ABF78915.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116650434|gb|ABK11074.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 218 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/188 (34%), Positives = 114/188 (60%), Gaps = 2/188 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 +F ID P LL A VVT+ I +FV+S ++G +A++++ + ++ + + Sbjct: 2 FFQNAIDFLPILLKGA-VVTIEITACAFVLSSVLGLILALLKVS-RNRAVATAGSTIINV 59 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RG P++VQLF +++ LP +G+ +F A ++ L + +SAY +E R+ I +I +GQ +A Sbjct: 60 IRGLPIIVQLFYMYFVLPDLGVQLSAFQAGVLGLGIAYSAYQAENFRAGIEAIDRGQIEA 119 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++AIG+ +R ++LPQ + P + + +LK +SVASTIT+ EI + Q I S+ Sbjct: 120 AHAIGMRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVASTITVAEITRAGQLIASS 179 Query: 185 TYQPLIIY 192 T+Q + +Y Sbjct: 180 TFQNMSVY 187 >gi|163743506|ref|ZP_02150884.1| amino acid ABC transproter, permease protein [Phaeobacter gallaeciensis 2.10] gi|161383209|gb|EDQ07600.1| amino acid ABC transproter, permease protein [Phaeobacter gallaeciensis 2.10] Length = 224 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/174 (36%), Positives = 107/174 (61%), Gaps = 7/174 (4%) Query: 44 VIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTL 100 V+RI D ++ L + F FRGTPLLVQLF+ +YGLP + V + A I+ LTL Sbjct: 46 VLRIPVLDQLVVLFISF----FRGTPLLVQLFLFYYGLPQVLSVLTQINGVSAAIMGLTL 101 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 +F+AY++E IR++I+ + + QW+A+ +IG+TR Q +R I+LPQ +A L + FI ++ Sbjct: 102 HFAAYMAESIRAAILGVDRSQWEAAQSIGMTRGQMMRRIVLPQAARIAAPTLVNYFIDMI 161 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 K TS+A T+ + E+ Q+ + ++ + +A +Y IL ++Q ++E Sbjct: 162 KGTSLAFTLGVTEMMGATQKEAAGSFLYFEAFLVVAVIYWILVEALSLVQRRLE 215 >gi|325697553|gb|EGD39439.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK160] Length = 521 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 70/206 (33%), Positives = 116/206 (56%), Gaps = 11/206 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---------DTIISLIM 58 ++ +++PQ L A +TL I+ + LIIG I V R + I + Sbjct: 284 ILAENWPQFLRGA-GLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFL 342 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + Y+ +FRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ Sbjct: 343 NVYIEVFRGTPMIVQSMVIYYGTAQAFGISIDRTIAAIFIVSINTGAYMSEIVRGGIFAV 402 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 403 DKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFS 462 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 I + TYQ + +A +Y +LT Sbjct: 463 GNTIATQTYQYFQTFTIIAVIYFVLT 488 >gi|24378751|ref|NP_720706.1| putative amino acid ABC transporter, permease protein, glutamine transport system [Streptococcus mutans UA159] gi|24376619|gb|AAN58012.1|AE014873_8 putative amino acid ABC transporter, permease protein, glutamine transport system [Streptococcus mutans UA159] Length = 517 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 129/232 (55%), Gaps = 12/232 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF--FSDTIISLIMHF 60 ++ + I+ + + L VTL I+ I + LIIG I V R S+ I++ + Sbjct: 280 FDQVSKIVKNNWKALLRGTGVTLLISIIGTIAGLIIGLLIGVYRTAPKASNLILAWLQKI 339 Query: 61 YVW-------IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRS 112 + W +FRGTP++VQ VI+YG G+ D +A I +++N AY+SEI+R Sbjct: 340 FGWLLTVYIEVFRGTPMIVQAMVIYYGTAQAFGVSLDRTLAAIFIVSINTGAYMSEIVRG 399 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++ KGQ++A+ A+G T +QT+R I+LPQ + +EF+ +K TSV + I++ Sbjct: 400 GIFAVDKGQFEAATALGFTHRQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVV 459 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQHTYS 223 E++ + + + TYQ + +A +Y ILT + I+++ +E + Q Y+ Sbjct: 460 ELYFSGNTVATQTYQYFQTFFIIAVIYFILTFTVTRILRL-VERKMDQDNYT 510 >gi|227903012|ref|ZP_04020817.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus acidophilus ATCC 4796] gi|227869255|gb|EEJ76676.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus acidophilus ATCC 4796] Length = 562 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 118/210 (56%), Gaps = 10/210 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI---------I 54 W + ++ + I +TL +A + ++ IG + ++R + T + Sbjct: 314 NWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTRGKRWALNFV 373 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 ++ YV IFRGTP++VQ VI+YG+ + + VA +I +++N AY++E+IR Sbjct: 374 KWLLSVYVEIFRGTPMMVQAAVIYYGIAQFWHLNLNRTVAALIIVSINTGAYLAEVIRGG 433 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 IIS P+GQ++A+ A+G+T Q + HIILPQ I +++EFI +K TSV S I++ E Sbjct: 434 IISTPEGQFEAASALGMTHNQRMWHIILPQAIKNCLPSITNEFIVNIKDTSVLSIISVSE 493 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +F I S +++ Y ++ +YLILT Sbjct: 494 LFFVGTTIASQSFKFFPTYLMISAIYLILT 523 >gi|229148755|ref|ZP_04277005.1| Amino acid ABC transproter, permease [Bacillus cereus m1550] gi|228634763|gb|EEK91342.1| Amino acid ABC transproter, permease [Bacillus cereus m1550] Length = 251 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 126/218 (57%), Gaps = 7/218 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + I S+P LL A IV TL + S V+ +IG A RI ++ +++ I H Y+ I Sbjct: 23 FEIFISSYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-NNKVLNSIAHVYIAII 80 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 81 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 139 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 140 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGN 199 Query: 186 YQPLIIYCELAFVYLIL----TSFCYIIQIKIESSVTQ 219 +Q L Y + YL+L T F +++ +++ T Sbjct: 200 FQQLDTYIIVGAYYLVLVLLFTYFVNLLENRLQRKETN 237 >gi|118476328|ref|YP_893479.1| glutamine ABC transporter permease [Bacillus thuringiensis str. Al Hakam] gi|196035649|ref|ZP_03103052.1| amino acid ABC transporter, permease protein [Bacillus cereus W] gi|218901838|ref|YP_002449672.1| amino acid ABC transporter, permease protein [Bacillus cereus AH820] gi|228913331|ref|ZP_04076964.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228925830|ref|ZP_04088914.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228932069|ref|ZP_04094961.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228944394|ref|ZP_04106767.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|118415553|gb|ABK83972.1| amino acid ABC transporter membrane protein 2, PAAT family [Bacillus thuringiensis str. Al Hakam] gi|195991616|gb|EDX55581.1| amino acid ABC transporter, permease protein [Bacillus cereus W] gi|218539284|gb|ACK91682.1| amino acid ABC transporter, permease protein [Bacillus cereus AH820] gi|228815296|gb|EEM61544.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228827652|gb|EEM73394.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228833845|gb|EEM79398.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228846240|gb|EEM91259.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 214 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 104/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + ++S ++ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILR-YMKIPVVSQVLGIIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A+I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQ 176 >gi|290581241|ref|YP_003485633.1| putative amino acid ABC transporter permease [Streptococcus mutans NN2025] gi|254998140|dbj|BAH88741.1| putative amino acid ABC transporter permease protein [Streptococcus mutans NN2025] Length = 517 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 129/232 (55%), Gaps = 12/232 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF--FSDTIISLIMHF 60 ++ + I+ + + L VTL I+ I + LIIG I V R S+ I++ + Sbjct: 280 FDQVSKIVKNNWKALLRGTGVTLLISIIGTIAGLIIGLLIGVYRTAPKASNLILAWLQKI 339 Query: 61 YVW-------IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRS 112 + W +FRGTP++VQ VI+YG G+ D +A I +++N AY+SEI+R Sbjct: 340 FGWLLTVYIEVFRGTPMIVQAMVIYYGTAQAFGVSLDRTLAAIFIVSINTGAYMSEIVRG 399 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++ KGQ++A+ A+G T +QT+R I+LPQ + +EF+ +K TSV + I++ Sbjct: 400 GIFAVDKGQFEAATALGFTHRQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVV 459 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQHTYS 223 E++ + + + TYQ + +A +Y ILT + I+++ +E + Q Y+ Sbjct: 460 ELYFSGNTVATQTYQYFQTFFIIAVIYFILTFTVTRILRL-VERKMDQDNYT 510 >gi|327399611|ref|YP_004340480.1| polar amino acid ABC transporter inner membrane subunit [Hippea maritima DSM 10411] gi|327182240|gb|AEA34421.1| polar amino acid ABC transporter, inner membrane subunit [Hippea maritima DSM 10411] Length = 314 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 121/190 (63%), Gaps = 8/190 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLF 75 L + +T+ ++ +S +++L+IGF + ++RI SD + + Y+ + RGTPLLVQ+F Sbjct: 112 LLMGLYMTIKVSLLSIIMALVIGFIVGLMRI--SDNPLFKNLAIVYIELIRGTPLLVQIF 169 Query: 76 VIFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 +I++ IG +F F A +L + AYI+EIIR+ I SIP+GQ +A+ A+G+ Sbjct: 170 IIYF---FIGTIFSMTRFFAGAFALAVFEGAYIAEIIRAGIQSIPRGQTEAAVALGMNYY 226 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q +R+II+PQ I L+ +FIS++K +S+ S I++ E+ + + IVS+T+ P ++ Sbjct: 227 QVMRYIIMPQAIKRVLPALAGQFISLIKDSSLLSVISLTELTKAGKEIVSSTFSPFEVWF 286 Query: 194 ELAFVYLILT 203 +A +Y I+T Sbjct: 287 SVAALYFIVT 296 >gi|149201683|ref|ZP_01878657.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Roseovarius sp. TM1035] gi|149144731|gb|EDM32760.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Roseovarius sp. TM1035] Length = 216 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/167 (38%), Positives = 108/167 (64%), Gaps = 4/167 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL +A ++ V +L++ +AV R+ I+ ++ ++ FRGTPLLVQLF+ +YGLP Sbjct: 14 LTLAMASVAMVCALVLSALLAVERVV-RVPILDWLVIVFISFFRGTPLLVQLFLFYYGLP 72 Query: 83 HIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + V D A I+ L L+F+AY++E IR++IIS+ + QW+A +IG+T+ Q ++ I Sbjct: 73 QVLSVLTRIDGVTAAILGLMLHFAAYMAESIRAAIISVDRSQWEAGQSIGMTQWQLMQRI 132 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ILPQ +A L + FI +LK+TS+A T+ + E+ AQ+ + ++ Sbjct: 133 ILPQAARVAAPTLVNYFIDMLKATSLAFTLGVTEMMGAAQKEAAGSF 179 >gi|117620598|ref|YP_858703.1| amino-acid ABC transporter permease protein YckJ [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562005|gb|ABK38953.1| probable amino-acid ABC transporter permease protein YckJ [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 222 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 77/199 (38%), Positives = 126/199 (63%), Gaps = 4/199 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ +A FV++L++ +A++R+F I L M Y+ FRGTPLLVQLF+++YGLP Sbjct: 23 TMEMALWGFVLALVLSLALAIVRVFRVPVIHWLAM-LYISFFRGTPLLVQLFLLYYGLPQ 81 Query: 84 IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 + +F D+F A I+ LTL+F+AY++E IR+SII I K Q +A+ +IG++R Q ++ II Sbjct: 82 LFPIFVGMDAFTAAIVGLTLHFAAYMAESIRASIIGIHKSQMEAALSIGMSRYQAMQRII 141 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LPQ + L + FI ++KSTS+A T+ + EI AQ S++++ + +A VY Sbjct: 142 LPQAARIATPSLMNYFIDMIKSTSLAFTLGVAEIMGKAQMEASSSFKFFESFMAVALVYW 201 Query: 201 ILTSFCYIIQIKIESSVTQ 219 ++ F +Q +E + + Sbjct: 202 VVVIFFTRLQHLLEVRLNR 220 >gi|322386833|ref|ZP_08060457.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] gi|321269115|gb|EFX52051.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] Length = 542 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 115/208 (55%), Gaps = 11/208 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISL 56 F + +++PQ L A +TL I+ + L IG I V R + F + Sbjct: 303 FKIWKENWPQFLRGA-GLTLLISITGTIAGLFIGLLIGVYRTAPISKNKALAFLQKLFGW 361 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 ++ Y+ IFRGTP++VQ VI+YG GI D A I +++N AY+SEI+R I Sbjct: 362 FLNVYIEIFRGTPMIVQSMVIYYGTAQAFGISIDRTAAAIFIVSINTGAYMSEIVRGGIF 421 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ KGQ++A+ A+G+T QT+R ++LPQ + +EF+ +K TSV + I++ E++ Sbjct: 422 AVDKGQFEAATALGMTHGQTMRKVVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELY 481 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 + I + TYQ + +A +Y +LT Sbjct: 482 FSGNTIATQTYQYFQTFTIIAVIYFVLT 509 >gi|257882917|ref|ZP_05662570.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|257884373|ref|ZP_05664026.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257889304|ref|ZP_05668957.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|260560085|ref|ZP_05832263.1| amino acid ABC transporter [Enterococcus faecium C68] gi|261207427|ref|ZP_05922113.1| amino acid ABC transporter [Enterococcus faecium TC 6] gi|289566473|ref|ZP_06446898.1| amino acid ABC transporter [Enterococcus faecium D344SRF] gi|257818575|gb|EEV45903.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|257820211|gb|EEV47359.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257825664|gb|EEV52290.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|260073920|gb|EEW62244.1| amino acid ABC transporter [Enterococcus faecium C68] gi|260078318|gb|EEW66023.1| amino acid ABC transporter [Enterococcus faecium TC 6] gi|289161738|gb|EFD09613.1| amino acid ABC transporter [Enterococcus faecium D344SRF] Length = 535 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 80/220 (36%), Positives = 127/220 (57%), Gaps = 17/220 (7%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIG-----FFIAVIRIFFSDTIISLIMH 59 + LI +++ Q L + T+ + ISF ++++IG F +A IR + I Sbjct: 323 FLGLIQNNY-QALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIRA------LRTIAS 375 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV I RG P++V F IF+GLP I G F+A +I+LTLN SAYI+EI+R I ++P Sbjct: 376 IYVDIIRGIPMMVLAFFIFFGLPGIVGFTIPDFLAGVITLTLNASAYIAEIVRGGINAVP 435 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS ++GL+ +T++ IILPQ I ++F+ LK T++ S I + E+ QT Sbjct: 436 VGQMEASRSLGLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTG 495 Query: 179 QRIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIE 214 + IV+ T Q +Y +A +YLI LT +++ K++ Sbjct: 496 KIIVARTTQSTYVYLIIAIMYLILITALTKLAKVLEKKVK 535 >gi|257878496|ref|ZP_05658149.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257894317|ref|ZP_05673970.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] gi|257812724|gb|EEV41482.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257830696|gb|EEV57303.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] Length = 535 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 80/220 (36%), Positives = 127/220 (57%), Gaps = 17/220 (7%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIG-----FFIAVIRIFFSDTIISLIMH 59 + LI +++ Q L + T+ + ISF ++++IG F +A IR + I Sbjct: 323 FLGLIQNNY-QALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIRA------LRTIAS 375 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV I RG P++V F IF+GLP I G F+A +I+LTLN SAYI+EI+R I ++P Sbjct: 376 IYVDIIRGIPMMVLAFFIFFGLPGIVGFTIPDFLAGVITLTLNASAYIAEIVRGGINAVP 435 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS ++GL+ +T++ IILPQ I ++F+ LK T++ S I + E+ QT Sbjct: 436 VGQMEASRSLGLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTG 495 Query: 179 QRIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIE 214 + IV+ T Q +Y +A +YLI LT +++ K++ Sbjct: 496 KIIVARTTQSTYVYLIIAIMYLILITALTKLAKVLEKKVK 535 >gi|228963739|ref|ZP_04124881.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar sotto str. T04001] gi|228795975|gb|EEM43441.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar sotto str. T04001] Length = 214 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 63/163 (38%), Positives = 105/163 (64%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + ++S ++ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILR-YMKIPVVSQVLGIIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + +A+I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIIIAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK T++A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTALAVVISLPELMHNAQ 176 >gi|254450652|ref|ZP_05064089.1| amino acid ABC transporter, permease protein [Octadecabacter antarcticus 238] gi|198265058|gb|EDY89328.1| amino acid ABC transporter, permease protein [Octadecabacter antarcticus 238] Length = 207 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/170 (37%), Positives = 105/170 (61%), Gaps = 9/170 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-----GIVF----DSFVAIIISLTLNFSAYISEIIR 111 Y++IFRGTP+LVQ+F+++YG P + GI++ D F I++LTLN AY+SEI+R Sbjct: 32 YIYIFRGTPILVQIFIVYYGFPQLEFIREGILWPIFRDPFGCAIVALTLNTGAYVSEILR 91 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++ + +G +A A+GL R Q ++ P + ++ IS+LKST++ STIT+ Sbjct: 92 GGVLGVDRGILEAGEALGLNRCQRFTYLTTPIAARLALPAYGNDVISLLKSTALVSTITL 151 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 ++ A+ IV+ TY P I+ LA VY+I+T F + +IE + ++T Sbjct: 152 ADMTGIARTIVAQTYAPYEIFISLAIVYMIITLFIQKLMARIERWLGRYT 201 >gi|157693109|ref|YP_001487571.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032] gi|157681867|gb|ABV63011.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus SAFR-032] Length = 237 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 76/230 (33%), Positives = 130/230 (56%), Gaps = 15/230 (6%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 ID P +L + TL IA +S +SLIIG A IR+F ++ ++ YV FRGTP Sbjct: 10 IDQVPHIL-KGVPFTLLIALVSMAVSLIIGSVFAFIRLF-RIPVLRQLVTLYVSFFRGTP 67 Query: 70 LLVQLFVIFYGLPHI--------GIVF-----DSFVAIIISLTLNFSAYISEIIRSSIIS 116 L+VQLF FYGLP + G+ F +++ +L+ +A+++E++RS++++ Sbjct: 68 LIVQLFAFFYGLPFVLTKMSDTFGLTFHPDMVSPLAVALMTFSLHSAAHLTEVVRSALLA 127 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + KGQ +A+ +G+T +Q + IILPQ + L ++ I +LK+TS++ TI + EI Sbjct: 128 VDKGQLEAAKIVGMTTRQAMMRIILPQAFVVALPNLGNQLIQLLKATSLSFTIGVLEIMG 187 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 ++ I + YQ L Y A +Y +L+ F + +E V+ + S+ + Sbjct: 188 ISRIIANDGYQFLETYLVSALIYWLLSIFFELAFALLEKRVSVYGRSLGR 237 >gi|21223626|ref|NP_629405.1| permease [Streptomyces coelicolor A3(2)] gi|256785263|ref|ZP_05523694.1| permease [Streptomyces lividans TK24] gi|289769154|ref|ZP_06528532.1| ABC-type amino acid transport system, permease [Streptomyces lividans TK24] gi|9968709|emb|CAC05960.1| permease [Streptomyces coelicolor A3(2)] gi|289699353|gb|EFD66782.1| ABC-type amino acid transport system, permease [Streptomyces lividans TK24] Length = 316 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 124/219 (56%), Gaps = 22/219 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + TL I ++ +I ++ G +AV+R+ + + S I FY+W FRGTP+LV Sbjct: 66 FDDRVLTGMGKTLLITVLAMLIGVVGGILLAVMRLS-KNPVTSSIAWFYIWFFRGTPVLV 124 Query: 73 QLFVIFYGLPHIGIVFD-----------------SFVAIIISLTLNFSAYISEIIRSSII 115 QL V F ++G+VF+ F+ ++ L LN +AY++EI R+ ++ Sbjct: 125 QLVVWF----NLGLVFEYINLGPFYRDEWSDFMTPFLTALLGLGLNEAAYMAEICRAGLL 180 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ +GQ +A++A+G++ +T+R I++PQ + P +E I++LK+TS+ S + E+F Sbjct: 181 AVDEGQTEAAHALGMSHTKTLRRIVVPQAMRVIVPPTGNEVINMLKTTSLVSVVQYAELF 240 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + AQ I T+ P + A YL+LTS + Q +E Sbjct: 241 RVAQDIGQTSGAPAEMLFLAAAWYLLLTSVFSVGQYYLE 279 >gi|302337868|ref|YP_003803074.1| polar amino acid ABC transporter inner membrane subunit [Spirochaeta smaragdinae DSM 11293] gi|301635053|gb|ADK80480.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 216 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 69/182 (37%), Positives = 111/182 (60%), Gaps = 2/182 (1%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +II P L AA+ TL IA S I+L +G +A + ++S+I+ Y I R Sbjct: 5 IIIQYLPDFLKAALE-TLKIAFFSACIALFLGLVLATVNQA-KIRLLSMIIDAYTIIMRS 62 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLLVQL+ I+YGLP +GI + +V+ +I+ +LN AY+ EI R + I KGQ+ A+Y+ Sbjct: 63 TPLLVQLYFIYYGLPLLGIQVNPYVSSVIAFSLNTGAYVVEIFRGGLEGIDKGQFYAAYS 122 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ +R+II PQ + PL S+F ++K TS+A+ + + E+ T + + S+TY+ Sbjct: 123 LGMGWFACLRYIIFPQVLQRVIAPLLSQFSYLIKDTSLAAVLVVQELTYTYRNVSSSTYR 182 Query: 188 PL 189 P+ Sbjct: 183 PM 184 >gi|227894269|ref|ZP_04012074.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] gi|227863912|gb|EEJ71333.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] Length = 526 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 119/212 (56%), Gaps = 10/212 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-------- 53 K W + ++ + I +TL +A + ++ IG + ++R + T Sbjct: 276 KENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTRGKRWALN 335 Query: 54 -ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 + ++ YV IFRGTP++VQ VI+YG+ + + +A +I +++N AY++E+IR Sbjct: 336 FVKWLLSVYVEIFRGTPMMVQAAVIYYGIAQFWHLNLNRTLAALIIVSINTGAYLAEVIR 395 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 IIS P+GQ++A+ A+G+T Q + HIILPQ I +++EFI +K TSV S I++ Sbjct: 396 GGIISTPEGQFEAASALGMTHNQRMWHIILPQAIRNCLPSITNEFIVNIKDTSVLSIISV 455 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F I S +++ Y ++ +YLILT Sbjct: 456 SELFFVGTTIASQSFKFFPTYLMISAIYLILT 487 >gi|58336459|ref|YP_193044.1| glutamine ABC transporter [Lactobacillus acidophilus NCFM] gi|58253776|gb|AAV42013.1| putative glutamine ABC transporter [Lactobacillus acidophilus NCFM] Length = 537 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 118/210 (56%), Gaps = 10/210 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI---------I 54 W + ++ + I +TL +A + ++ IG + ++R + T + Sbjct: 289 NWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTRGKRWALNFV 348 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 ++ YV IFRGTP++VQ VI+YG+ + + VA +I +++N AY++E+IR Sbjct: 349 KWLLSVYVEIFRGTPMMVQAAVIYYGIAQFWHLNLNRTVAALIIVSINTGAYLAEVIRGG 408 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 IIS P+GQ++A+ A+G+T Q + HIILPQ I +++EFI +K TSV S I++ E Sbjct: 409 IISTPEGQFEAASALGMTHNQRMWHIILPQAIKNCLPSITNEFIVNIKDTSVLSIISVSE 468 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +F I S +++ Y ++ +YLILT Sbjct: 469 LFFVGTTIASQSFKFFPTYLMISAIYLILT 498 >gi|218233063|ref|YP_002365438.1| amino acid ABC transporter, permease protein [Bacillus cereus B4264] gi|229171425|ref|ZP_04299010.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus MM3] gi|218161020|gb|ACK61012.1| amino acid ABC transporter, permease protein [Bacillus cereus B4264] gi|228612129|gb|EEK69366.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus MM3] Length = 214 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 104/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ ++S IIG I ++R + ++S I+ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIILSFIIGSVIGILR-YMKIPVVSQILGIVVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A+I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|255527439|ref|ZP_05394312.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] gi|296187468|ref|ZP_06855863.1| ABC transporter, permease protein [Clostridium carboxidivorans P7] gi|255508885|gb|EET85252.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] gi|296047990|gb|EFG87429.1| ABC transporter, permease protein [Clostridium carboxidivorans P7] Length = 235 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 79/214 (36%), Positives = 123/214 (57%), Gaps = 22/214 (10%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I++FP++L A+ +TL I+ +S I L+IG IA+ R + I+ I +V RGTP Sbjct: 9 INTFPKIL-KAVPMTLSISIVSIAIGLVIGLIIAICRTN-NIPILKTICAVFVSFIRGTP 66 Query: 70 LLVQLFVIFYGLPHI---------------GIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 ++VQL+V+FYG P + GI S +I+ TLN +AY+SE IRS++ Sbjct: 67 IIVQLYVVFYGFPELLTYLHQSLGWKVSPNGISHISIA--LIAFTLNAAAYLSENIRSAL 124 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+ KGQ +A+Y+IG+T + R IILPQ + + S+ FI I K TS+A ++ + EI Sbjct: 125 SSVNKGQLEAAYSIGMTSFEAYRRIILPQALVAALPNFSNVFIQITKDTSLAFSVMVVEI 184 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 + ++ Y+ L Y + A +Y I+ CYI Sbjct: 185 MAVSSVEAASGYKYLEAYLDAAIIYFIV---CYI 215 >gi|167588266|ref|ZP_02380654.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ubonensis Bu] Length = 229 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 113/183 (61%), Gaps = 2/183 (1%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 +D P LL AIV T+ I +FV+S ++G +A++++ + ++S V + RG P Sbjct: 18 LDFLPILLKGAIV-TIEITACAFVLSSVLGLVLALLKVS-RNPLVSTAGSTIVNVIRGLP 75 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 ++VQLF +++ LP +G+ +F A ++ L + +SAY +E R+ I +I +GQ +A++AIG Sbjct: 76 IIVQLFYMYFVLPDLGVQLSAFQAGVLGLGIAYSAYQAENFRAGIEAIDRGQIEAAHAIG 135 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 + +R ++LPQ + P + + +LK +SVASTIT+ EI + Q I S+T+Q + Sbjct: 136 MRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVASTITVAEITRAGQLIASSTFQNM 195 Query: 190 IIY 192 +Y Sbjct: 196 SVY 198 >gi|162448163|ref|YP_001621295.1| ABC transporter permease [Acholeplasma laidlawii PG-8A] gi|161986270|gb|ABX81919.1| ABC-type transport system, permease component [Acholeplasma laidlawii PG-8A] Length = 218 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 71/191 (37%), Positives = 114/191 (59%), Gaps = 8/191 (4%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI---GIVFD 89 ++S+ +G AVIR I+ LI Y WI RGTPLL+QLF + YGLP + +FD Sbjct: 26 LLSIPLGLIFAVIRKISIQPIVKLI-DLYTWIIRGTPLLLQLFFVVYGLPILFGPAFLFD 84 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 I + +N++AY EI R + +I KGQ+DAS AI L+ QT RHIILPQT+ + Sbjct: 85 ELYGAIFTFIINYTAYFIEIFRGGMNAIHKGQYDASKAIHLSPYQTYRHIILPQTLHKTL 144 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYII 209 + +E I+++K T++ S ++I +I + ++ +V+ ++ + Y A +YL+ F Y+I Sbjct: 145 PSIGNELITLIKDTALVSAVSISDILRNSRELVNRDFR-VESYMVAAVIYLL---FTYVI 200 Query: 210 QIKIESSVTQH 220 + + T+H Sbjct: 201 VMLFKKIETRH 211 >gi|120405655|ref|YP_955484.1| polar amino acid ABC transporter inner membrane subunit [Mycobacterium vanbaalenii PYR-1] gi|119958473|gb|ABM15478.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium vanbaalenii PYR-1] Length = 492 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 119/200 (59%), Gaps = 5/200 (2%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMHFYVW 63 +F L+ +FP +L + +TL + +S I+L++G + R+ S +I + I YV Sbjct: 279 FFGLLKSTFP-ILMEGLRLTLILTVVSIAIALVLGVMFGLFRV--SRSIWLRAIGTTYVD 335 Query: 64 IFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 IFRGTPLLVQ F I++G+P + + A II+L+LN AY++EI+R I S+ KGQ Sbjct: 336 IFRGTPLLVQAFFIYFGVPSALDFRMTALTAGIITLSLNAGAYMTEIVRGGIQSVDKGQM 395 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ ++G+ T+R +ILPQ I T ++F+ LK TS+ S I I E+ QT + I+ Sbjct: 396 EAARSLGIGYLPTMRKVILPQAIRTMIPSYVNQFVITLKDTSILSVIGIAELTQTGRLII 455 Query: 183 STTYQPLIIYCELAFVYLIL 202 + YQ ++ + +Y I+ Sbjct: 456 ARNYQSFTMWLIIGVIYFIV 475 >gi|307299985|ref|ZP_07579770.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Sinorhizobium meliloti BL225C] gi|306904874|gb|EFN35457.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Sinorhizobium meliloti BL225C] Length = 220 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 110/187 (58%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + P L+ + T+ + V++ +IG A++R+ + T I+ + F Sbjct: 1 MEWDW-EFVRQIMPTLI-EGLKTTILATALGSVVAAVIGLVFAILRMT-APTPIARVTSF 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V RGTPLLVQL+ IFY LP IGI + VA +I L +++ Y +E+ R+ I ++P+G Sbjct: 58 AVEFIRGTPLLVQLYFIFYVLPDIGIRLPALVAGVIGLGIHYGTYAAEVYRAGIENVPRG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A LT +QT H+ILPQ I L++ I++ K T + S IT+ E+ A+ Sbjct: 118 QWEAAKATNLTARQTWIHVILPQAIPPMIPALANYLIAMFKETPLLSAITVLELMNQAKS 177 Query: 181 IVSTTYQ 187 I ++ Y+ Sbjct: 178 IANSNYR 184 >gi|324324681|gb|ADY19941.1| glutamine ABC transporter permease [Bacillus thuringiensis serovar finitimus YBT-020] Length = 214 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 67/163 (41%), Positives = 103/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A I+ V+S IIG I ++R + I+S I+ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVIGILR-YMKIPIVSQILGIIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|113869257|ref|YP_727746.1| ABC transporter permease [Ralstonia eutropha H16] gi|113528033|emb|CAJ94378.1| ABC-type transporter, permease component: PAAT family [Ralstonia eutropha H16] Length = 217 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 122/203 (60%), Gaps = 9/203 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + I+ +S+ +G +A+ RI S +S +++ Y+W+ RGTPL++Q+ I++ LP Sbjct: 17 VTLTLFAITLALSVPLGLALALARIS-SWPWLSGLVNGYIWLMRGTPLMLQMLFIYFALP 75 Query: 83 H---IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 IG+ F A +++ LN++AY +EI R+ I S+ +GQ++AS A+G+T QT+R + Sbjct: 76 FVPVIGVRLPDFPAAVVAFALNYAAYFAEIFRAGIKSVDRGQYEASKALGMTYFQTMRRV 135 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST--TYQPLIIYCELAF 197 +LPQ ++ P+S+E I+++K TS+ + + +I +TA+ IV T P ++ A Sbjct: 136 VLPQMVSRVLPPVSNETITLIKDTSLIYVLALNDILRTARGIVQRDFTTTPFLV---AAL 192 Query: 198 VYLILTSFCYIIQIKIESSVTQH 220 YL++T +E +H Sbjct: 193 FYLVMTLILTWFFQNLEKRYAKH 215 >gi|302337440|ref|YP_003802646.1| polar amino acid ABC transporter inner membrane subunit [Spirochaeta smaragdinae DSM 11293] gi|301634625|gb|ADK80052.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 217 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 67/184 (36%), Positives = 111/184 (60%), Gaps = 9/184 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EW+ I+ +F L+ +V + C++ + +++I +A +R+ ++ + Y+ Sbjct: 10 EWWPKILSAFGTTLFYFVVCS----CVAVLFAILISMLLA-LRL----KGLTCFLRAYIA 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 +FR TPLLVQLF++FYGLP IGI +F +I + LN A+ISEIIR I ++P+G W+ Sbjct: 61 VFRNTPLLVQLFLLFYGLPFIGIRMPAFFCGLIGVALNEGAFISEIIRGYIEALPRGDWE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A ++GL+R IR+ ILPQ + S ++ + I+K TS+ S I I E+ +TA I + Sbjct: 121 AGESLGLSRFSVIRYAILPQALRDSVPAVTGQISIIIKDTSLFSMIMISELTRTANSIYT 180 Query: 184 TTYQ 187 T+ Sbjct: 181 RTFD 184 >gi|170691225|ref|ZP_02882390.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170143430|gb|EDT11593.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 222 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 75/198 (37%), Positives = 127/198 (64%), Gaps = 1/198 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ +I +P ++ A+V T+ + S +S +G I + R+ I+ Y+ F Sbjct: 5 FSPVIAGWPDIMQGALV-TVEVTAASLALSCALGLLIGIGRLTPQRRIVYGFCTAYLTFF 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF++F+GLP GI+ +F+ ++ L L +AY+SEI+R +I S+ +GQ +A+ Sbjct: 64 RGTPLLVQLFLLFFGLPQFGILLPAFLCGMLGLGLYSAAYVSEIVRGAIQSVDRGQMEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IG++ Q +R IILPQ I PL +EFI+++K++++ S +TI ++ Q+I+S + Sbjct: 124 RSIGMSSGQAMRAIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIDDLMHEGQKIISVS 183 Query: 186 YQPLIIYCELAFVYLILT 203 Y+ L +Y +A VYL+LT Sbjct: 184 YRSLEVYLAIALVYLVLT 201 >gi|330718659|ref|ZP_08313259.1| amino acid ABC transporter [Leuconostoc fallax KCTC 3537] Length = 414 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 118/198 (59%), Gaps = 7/198 (3%) Query: 11 DSF----PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 DSF L + TL +A I+ ++ + +G +A++++ + I+ I + YV R Sbjct: 200 DSFWAKYGNLFIKGTLYTLALAAIAVIVGVGLGTVLALMKLSRA-FILKAIANIYVEYVR 258 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ F++F+G IG+ +F A +++ LN +AY++EIIRS I S+ GQ +A+ Sbjct: 259 GTPLLVQAFMVFFGTQVIGLNLSAFAAGALAMGLNSAAYVTEIIRSGINSVSAGQMEAAR 318 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVSTT 185 ++GL+ +T+R++ILPQ + L +EF++++K SV S I + E+ FQT I + Sbjct: 319 SLGLSNGKTMRYVILPQAVKNILPALGNEFVTVIKEGSVVSVIGVGELMFQTG-VIQGAS 377 Query: 186 YQPLIIYCELAFVYLILT 203 ++P + +Y +LT Sbjct: 378 FKPFFPLLITSVIYFVLT 395 >gi|288960700|ref|YP_003451040.1| polar amino acid transport system permease protein [Azospirillum sp. B510] gi|288913008|dbj|BAI74496.1| polar amino acid transport system permease protein [Azospirillum sp. B510] Length = 219 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/219 (33%), Positives = 121/219 (55%), Gaps = 6/219 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+Y+W + + L+ ++ TL + L++G IA+ R+ + I + ++ Sbjct: 1 MQYQWDFGFLLQYKGLIGVGVLYTLAFTIGTAASGLVVGCMIALARLS-NMRIATAVVTG 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 + IFR TP+LVQL ++Y LP + GI VA I+LTL +++ EIIR IIS+ Sbjct: 60 VIEIFRCTPVLVQLVWVYYALPILTGIELSPSVAAFITLTLYGASFFGEIIRGGIISVDM 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQWDA A+G+ R Q + +ILPQ PL ++ + LK+TS+ S + +P++ Q Sbjct: 120 GQWDAGRALGMRRHQLMGGVILPQAFRRMVPPLVNQTVLQLKNTSLLSVLAVPDLLYQGQ 179 Query: 180 RIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIE 214 I S +Y+PL Y +A +Y I LT F + ++ ++ Sbjct: 180 LITSASYRPLETYTMIAVIYFIILFPLTRFAHRLEARMS 218 >gi|228995974|ref|ZP_04155630.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides Rock3-17] gi|229003591|ref|ZP_04161407.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides Rock1-4] gi|228757633|gb|EEM06862.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides Rock1-4] gi|228763747|gb|EEM12638.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides Rock3-17] Length = 214 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 67/163 (41%), Positives = 104/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L ++VTL IA ++ ++S IIG + +R + ++S ++ F V I R PLL+ +F Sbjct: 15 LLKGLLVTLEIAVVAILLSFIIGSIVGTLR-YAKIPVVSQLLAFIVEIIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ A GL+ QT+ Sbjct: 74 TYFALPEAGLKLEITTAAIVALTIFEAAMISEIVRSGLLSIEKGQIEAARASGLSYIQTL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|228956816|ref|ZP_04118601.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802857|gb|EEM49690.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar pakistani str. T13001] Length = 251 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 126/218 (57%), Gaps = 7/218 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + I ++P LL A IV TL + S V+ +IG A RI ++ +++ I H Y+ I Sbjct: 23 FEIFISTYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-NNKVLNSIAHVYIAII 80 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + IVF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 81 RGTPLIVQIAILYFGITSV-IVFSPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 139 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 140 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGN 199 Query: 186 YQPLIIYCELAFVYLIL----TSFCYIIQIKIESSVTQ 219 +Q L Y + YL+L T F +++ +++ T Sbjct: 200 FQQLDTYIIVGAYYLVLVLLFTYFVNLLEKRLQRKETN 237 >gi|312277580|gb|ADQ62237.1| Amino acid (Glutamine) ABC transporter substrate binding protein/permease protein [Streptococcus thermophilus ND03] Length = 516 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 122/226 (53%), Gaps = 11/226 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF--FSDTIISLIMHFYVW-- 63 +I ++PQ L +TL I+ I V+ IG I V R ++ ++L+ + W Sbjct: 286 IIAKNWPQFLRG-TAITLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKIFGWFL 344 Query: 64 -----IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 +FRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ Sbjct: 345 NVYIEVFRGTPMIVQSMVIYYGTAQAFGINIDRTLAAIFIVSINTGAYMSEIVRGGIFAV 404 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A+ A+G + QT+R I+LPQ I +EF+ +K TSV + I++ E++ Sbjct: 405 DKGQFEAATALGFSHGQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVVELYFA 464 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + + TYQ + +A +Y +LT I +E + Q TY+ Sbjct: 465 GNTVATQTYQYFQTFFVIAAIYFVLTFTVTRILRYVERRLDQDTYT 510 >gi|24379263|ref|NP_721218.1| putative glutamine ABC transporter, permease protein [Streptococcus mutans UA159] gi|24377179|gb|AAN58524.1|AE014921_9 putative glutamine ABC transporter, permease protein [Streptococcus mutans UA159] Length = 728 Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 68/219 (31%), Positives = 125/219 (57%), Gaps = 9/219 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F L+ +++ QLL + + TL + +SF +++I+G ++ + T+ +I +V + Sbjct: 511 FGLLSNNYKQLL-SGLGTTLSLVILSFALAMIVGILFGMMSVSPYKTL-RIIASIFVDVV 568 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RG PL++ IF+G+P++ + FVA I+LTLN AYI+EI+R I ++P Sbjct: 569 RGIPLMIVAAFIFWGIPNLIESITGHQSPINDFVAGTIALTLNGGAYIAEIVRGGIEAVP 628 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS ++G++ K T++ IILPQ ++F+ LK T++ S I + E+FQ Sbjct: 629 SGQMEASRSLGISYKTTMKRIILPQAFKLMLPNFINQFVISLKDTTIISAIGLIELFQAG 688 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + I++ YQ +Y LA +YL++ + + ++E + Sbjct: 689 KIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRI 727 >gi|148252818|ref|YP_001237403.1| amino acid ABC transporter membrane protein [Bradyrhizobium sp. BTAi1] gi|146404991|gb|ABQ33497.1| amino acid ABC transporter membrane protein, PAAT family [Bradyrhizobium sp. BTAi1] Length = 219 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 74/203 (36%), Positives = 113/203 (55%), Gaps = 2/203 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M YEW + + +L+ T+ ++ V I+G +A+ + + +IS + Sbjct: 1 MHYEWSFGFLLQYSKLIGVGTAYTIGFTILTAVAGFIVGCIVAIASLS-NIRLISSPLVM 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 V IFR TP+LVQL I+Y LP IG+ VA ISL+L A+ SEIIR I+SI Sbjct: 60 LVEIFRCTPVLVQLVWIYYALPVLIGVELSPAVAAFISLSLYGGAFYSEIIRGGIVSIDP 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQWDA A+G+ R +R I++PQ + PL ++ + LK+TS+ S + +P++ Q Sbjct: 120 GQWDAGRALGMRRFDLMRRIVMPQALKRMIPPLVNQAVLQLKNTSLLSVLAVPDLLYQGQ 179 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 I S TY+PL Y +A +Y I+ Sbjct: 180 LITSATYRPLETYTMIAVIYFII 202 >gi|27381510|ref|NP_773039.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110] gi|27354678|dbj|BAC51664.1| blr6398 [Bradyrhizobium japonicum USDA 110] Length = 216 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 113/193 (58%), Gaps = 3/193 (1%) Query: 12 SFPQLL--YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 +FP++L A I T+ ++ I+F G +A++R + SL F V F+GTP Sbjct: 6 AFPEILSIAAGIKATILLSLIAFCGGGGGGLIVALLRTAERKWVRSLAAMF-VDFFQGTP 64 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +L+QLF+++YGLP +G + +VA I LTL+ SA++ EI R I+++P+GQ +A+ A+G Sbjct: 65 MLMQLFLVYYGLPVLGFHVNVWVAASIGLTLHASAFLGEIWRGGIMAVPRGQMEAASALG 124 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L + ++LPQ S P + ++K TS+AS I E+ ++AQ + STTY+PL Sbjct: 125 LGYTSRMIDVVLPQAFRLSLAPTVGFLVQLIKGTSLASIIGFVELSRSAQIVASTTYRPL 184 Query: 190 IIYCELAFVYLIL 202 + Y Y L Sbjct: 185 LAYGMAGLCYFAL 197 >gi|29829525|ref|NP_824159.1| arginine/ornithine transport permease [Streptomyces avermitilis MA-4680] gi|29606633|dbj|BAC70694.1| putative arginine/ornithine ABC transport permease [Streptomyces avermitilis MA-4680] Length = 312 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 74/219 (33%), Positives = 127/219 (57%), Gaps = 22/219 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + TL + +S +I ++ G +AV+R+ + + S I FY+W FRGTP+LV Sbjct: 65 FDDRILTGVGKTLLLTVLSMLIGIVGGILLAVMRLS-KNPVTSSIAWFYIWFFRGTPVLV 123 Query: 73 QLFVIFYGLPHIGIVFD-------------SFVA----IIISLTLNFSAYISEIIRSSII 115 QL + F ++G+VF+ SF+ ++ L LN +AY++EI R+ ++ Sbjct: 124 QLIIWF----NLGLVFEYINLGPIYKDYWSSFMTPLLTALLGLGLNEAAYMAEICRAGLL 179 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ +GQ +AS+A+G++ +T+R I++PQ + P +E I++LK+TS+ S + PE+F Sbjct: 180 SVDEGQTEASHALGMSHNKTLRRIVIPQAMRVIVPPTGNEVINMLKTTSLVSVVQYPELF 239 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + AQ I T+ P+ + A YLI+TS I Q +E Sbjct: 240 RYAQDIGQTSGAPVEMLFLAAAWYLIMTSVLSIGQYYVE 278 >gi|296450403|ref|ZP_06892159.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP08] gi|296879474|ref|ZP_06903468.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP07] gi|296260664|gb|EFH07503.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP08] gi|296429620|gb|EFH15473.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP07] Length = 220 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 78/225 (34%), Positives = 129/225 (57%), Gaps = 14/225 (6%) Query: 1 MKY--EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 MKY E F +I+ SF VT+ +A S V SLIIG +A + ++ +++ I Sbjct: 5 MKYFLELFPIIMKSFN--------VTVILAISSLVFSLIIGTIVA-LSSYYKVKVLNQIC 55 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSII 115 YV IFRGTPL+ QLF +++GL ++ D A I L+LN AY+SE IR+SI+ Sbjct: 56 KVYVSIFRGTPLMPQLFFLYFGLAYMSDFVKNMDPVFATSIVLSLNMGAYMSETIRASIL 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SI KGQ +A+YA+GLT QT++ I++PQ + + L + FI ++K +SVA + + +I Sbjct: 116 SIDKGQIEAAYAMGLTNLQTMKRIVIPQAVRVALPSLFNNFIDLIKGSSVAFVVGVNDIM 175 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 A+ + +++ +Y + +Y + + Q K+E ++ + Sbjct: 176 GAAKSQGALSFKFFEVYGAVMVIYWCIITPLGWGQKKLEKKISNY 220 >gi|289424103|ref|ZP_06425889.1| amino acid ABC transporter, permease protein [Peptostreptococcus anaerobius 653-L] gi|289155528|gb|EFD04207.1| amino acid ABC transporter, permease protein [Peptostreptococcus anaerobius 653-L] Length = 205 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 63/188 (33%), Positives = 113/188 (60%), Gaps = 4/188 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + + L + ++ V S+ +G +A +RI + + + FY+WI RG+PLL+Q+ ++Y Sbjct: 4 GLKIVLELFVLTTVFSIPLGLLVAQVRIS-KNKLARSVTSFYIWIMRGSPLLLQMMFLYY 62 Query: 80 GLP--HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 GLP + +VFD +I+ T+N++AY +EI RS + SI +GQ++A+ +G + R Sbjct: 63 GLPLLNENLVFDKMPIAVIAFTINYAAYYAEIFRSGLESIDRGQYEAAKVLGFDKWTMNR 122 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 II+PQ I P+S+EFI+++K TS+ S + + ++F+ A S L+ + A Sbjct: 123 RIIIPQVIKRVLPPVSNEFINLVKDTSLVSVLGLNDLFRIAT-AASNREASLMPFLYAAI 181 Query: 198 VYLILTSF 205 +YL+LT+ Sbjct: 182 IYLVLTAL 189 >gi|299068866|emb|CBJ40107.1| putative amino acid transmembrane ABC transporter protein [Ralstonia solanacearum CMR15] Length = 262 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 62/189 (32%), Positives = 106/189 (56%), Gaps = 9/189 (4%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMH---FYVWIFRGTPLLVQLFVIFYGLPH--IGIVFD 89 S + G + V+ + +SL+ FY+W+ RGTPLLVQ+ +F LP + D Sbjct: 68 SALAGVLLGVVAALGKLSPVSLLRQAASFYIWVIRGTPLLVQILFVFLALPAWLPWLQMD 127 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 F + ++L N AY +E IR+ ++++PKGQ +A++++GL+R T +I PQ + Sbjct: 128 DFTSACVALAFNAGAYNAESIRAGLLAVPKGQLEAAHSLGLSRWHTFADVIFPQAFKVAL 187 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL----ILTSF 205 PL + FIS+LK +S+A I + E+ R+ + T+QPL A +YL +LT F Sbjct: 188 PPLVNNFISLLKDSSLAYAIGVVELTNVGNRLQAATFQPLPALVTTAVIYLALTTVLTQF 247 Query: 206 CYIIQIKIE 214 ++ +++ Sbjct: 248 SNAVEQRMD 256 >gi|302336124|ref|YP_003801331.1| polar amino acid ABC transporter, inner membrane subunit [Olsenella uli DSM 7084] gi|301319964|gb|ADK68451.1| polar amino acid ABC transporter, inner membrane subunit [Olsenella uli DSM 7084] Length = 748 Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 121/196 (61%), Gaps = 3/196 (1%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L++ SF L + +V L I +++ ++++G A+++I + + Y+ + RG Sbjct: 476 LLVTSFVSL-FGGWLVCLGIVIVAYPFAILLGLLFAIMKIS-GVRLARGVAAVYINVLRG 533 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPL +Q++++F+GLP +GI D+ V ++ + +N SAY++EI R+ I SIP+GQ++A+ + Sbjct: 534 TPLFLQIYIMFFGLPMMGINIDNNVLGVMVMAINSSAYLAEIFRAGIQSIPQGQYEAAAS 593 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ R QT+ IILPQT+ ++S+FI+ K TS+ S++ + E+ ++ + +T Sbjct: 594 LGMNRAQTMLSIILPQTVRRVIPTVTSDFITSYKDTSLLSSVGVMELMMFSKNL-TTVSG 652 Query: 188 PLIIYCELAFVYLILT 203 + Y A YLI+T Sbjct: 653 NITPYMAAAIYYLIVT 668 >gi|297162527|gb|ADI12239.1| ABC transporter, permease [Streptomyces bingchenggensis BCW-1] Length = 275 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 77/241 (31%), Positives = 135/241 (56%), Gaps = 25/241 (10%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++EW + F + I V+L + ++ ++SL +G +A++R+ S +++ + + Sbjct: 22 RFEWGTVGKYFFEIRIIKGIGVSLGMTAVTMLLSLALGTVVALMRMG-SSRLMATVAAAF 80 Query: 62 VWIFRGTPLLVQLFVIFYGLP------HIGI-------VFDS------FVAIIISLTLNF 102 +W+FR P+LVQL +Y L +GI FDS A +I LTL+ Sbjct: 81 IWVFRSIPMLVQLL-FWYNLAALFPTLSLGIPWGPRFVTFDSNSLLGPLTAAVIGLTLHE 139 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AYI+E+IRS ++++P GQ A+ +GLT QT I LPQ + PL +E IS+LK+ Sbjct: 140 TAYIAELIRSGLLAVPDGQRQAAATLGLTPGQTFFRITLPQALRVIVPPLGNELISLLKA 199 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TS+ S I++ ++ + Q I + +Q PL+I A Y+I+T ++Q ++E +++H Sbjct: 200 TSLVSVISLADLLYSVQLIYAKNFQTVPLLIVA--AIWYMIITGLITLLQQRLERRLSRH 257 Query: 221 T 221 T Sbjct: 258 T 258 >gi|237752093|ref|ZP_04582573.1| polar amino acid ABC transporter [Helicobacter winghamensis ATCC BAA-430] gi|229376660|gb|EEO26751.1| polar amino acid ABC transporter [Helicobacter winghamensis ATCC BAA-430] Length = 232 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 83/228 (36%), Positives = 128/228 (56%), Gaps = 12/228 (5%) Query: 2 KYEWF--NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI-----RIFFSDTII 54 K E F LII L+ I VT+ +A +I +IIG +A++ + F + ++ Sbjct: 3 KLEVFYNQLIIKGGYALVLEGIWVTIVLAVCGLLIGIIIGTLLAILLTKDEKSAF-ERVL 61 Query: 55 SLIMHFYVWIFRGTPLLVQL-FVIFYGLPHIGIVFDS--FVAIIISLTLNFSAYISEIIR 111 I YV FRGTP++VQL F+ F LP G+ S VA++I LN AY+SEIIR Sbjct: 62 VFIGRLYVGFFRGTPIVVQLLFIYFVILPLFGLAGSSALLVAVVI-FGLNSGAYVSEIIR 120 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I+S+ GQ +A+ A+GL KQ++R ++ PQ + + L +EFI++LK TSVA+ +T+ Sbjct: 121 GGILSVDSGQNEAARALGLNSKQSMRFVVFPQALKNALPNLGNEFITLLKETSVANYVTV 180 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 ++ + I S +Y+ +I Y LA YL+L I K E + + Sbjct: 181 HDLTYAFKTIGSASYEYMIPYFFLAVCYLVLVILASFIVKKYEGKLRR 228 >gi|15894165|ref|NP_347514.1| amino acid ABC transporter permease [Clostridium acetobutylicum ATCC 824] gi|15023774|gb|AAK78854.1|AE007603_5 Amino acid ABC transporter permease component [Clostridium acetobutylicum ATCC 824] gi|325508293|gb|ADZ19929.1| Amino acid ABC transporter permease component [Clostridium acetobutylicum EA 2018] Length = 221 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 126/213 (59%), Gaps = 5/213 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 ++SFP LL I T+ +A IS +I L+I +A I++ + S ++ Y+ FRGTP Sbjct: 9 LNSFPDLL-KYIHYTIFMAVISTIIGLVIATILAPIKMLKIKGL-SQVIGVYISFFRGTP 66 Query: 70 LLVQLFVIFYGLPHIGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 LLVQLFV +YGLP + + A+I+ L+L SAY++EIIR +I S+ KGQ +A+ Sbjct: 67 LLVQLFVFYYGLPQLIKPLKNVTPLEAMILGLSLCGSAYMAEIIRGAIESVEKGQMEAAL 126 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+T+ Q II PQ I + + ++F+ +LKS+S+A + + EI AQ ++++ Sbjct: 127 SVGMTKFQAFTRIIYPQAIRVAIPGIGNQFVDLLKSSSLAFVLGLTEILARAQMNAASSF 186 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + + Y LA +Y + +Q IE +++ Sbjct: 187 KVMESYLSLAIIYWVTVEIFNFLQRIIEKRISR 219 >gi|326797190|ref|YP_004315010.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas mediterranea MMB-1] gi|326547954|gb|ADZ93174.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas mediterranea MMB-1] Length = 314 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 67/192 (34%), Positives = 124/192 (64%), Gaps = 7/192 (3%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ I+ IS V S+I+G ++RI + +L + YV + RGTPLLVQ+F++++ Sbjct: 118 VTIKISFISLVFSIILGLIFGLMRISHRQVLRNLAVT-YVEVIRGTPLLVQIFIVYF--- 173 Query: 83 HIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 IG VFD F A + +L++ AY++EI+R+ I ++P GQ +A+ ++G+ Q + ++I Sbjct: 174 FIGTVFDLDRFTAGVAALSIFTGAYVAEIVRAGIQAVPTGQMEAARSLGMNYVQAMCYVI 233 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 +PQ I + PL+ +FI+++K +S+ S I+I ++ + + +VS ++ P ++ +A +YL Sbjct: 234 MPQAIKRTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSGSFAPFEVWFTVAALYL 293 Query: 201 ILT-SFCYIIQI 211 I+T + + IQI Sbjct: 294 IVTGALSWAIQI 305 >gi|239833820|ref|ZP_04682148.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239821883|gb|EEQ93452.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 239 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 122/209 (58%), Gaps = 14/209 (6%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M E+++ D+F Q+L + +TL +A S V + A++R+ T++ I Sbjct: 1 MNLEFYS---DAFFQML-GGVPLTLKLAASSIVFGAFLALLFALMRLS-GLTVLDWIARL 55 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIR 111 YV++FRGTPLLVQ+F+I+YGL + SF+ II+LTLN +AY SEIIR Sbjct: 56 YVFVFRGTPLLVQIFIIYYGLSQFPAIRYSFLWPILREPYWCAIIALTLNNAAYASEIIR 115 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++S+P GQ +A+ A G++ R I++P I + +E IS++K+TS+AS IT+ Sbjct: 116 GGLLSVPHGQIEAAKACGMSSFTCFRRIVMPLAIRQALPGYGNEMISMIKATSLASIITL 175 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 E+ A ++++ +Y+ + I+ +YL Sbjct: 176 MEVTGIAAKLIAESYRAIEIFVIAGAIYL 204 >gi|257784235|ref|YP_003179452.1| polar amino acid ABC transporter, inner membrane subunit [Atopobium parvulum DSM 20469] gi|257472742|gb|ACV50861.1| polar amino acid ABC transporter, inner membrane subunit [Atopobium parvulum DSM 20469] Length = 449 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 132/223 (59%), Gaps = 13/223 (5%) Query: 14 PQLLYAAIVVTLP--IACISFVI-----SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 PQL+ +++V+ P + C++ VI ++++G A+++I + ++ + Y+ + R Sbjct: 217 PQLIVSSVVMLFPGWLVCLAIVICAYPVAIVLGMGFALLKIS-KNPLLRALAVVYINLLR 275 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTP +Q++++F+GLP + I D+ + I + +N SAY+SEI R+ I SIP+GQ++A+ Sbjct: 276 GTPFFLQIYILFFGLPMLNINLDTNLLGFIVVAINSSAYLSEIFRAGIQSIPQGQYEAAS 335 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+ R QT+ II+PQTI PL+S+FI+ K TS+ S++ + E+ A+ + ++T Sbjct: 336 SLGMNRFQTMTFIIIPQTIRRVIPPLTSDFITSYKDTSLLSSVGVMELMMFAKNLTTSTG 395 Query: 187 QPLIIYCELAFVYLILT----SFCYIIQIKIESSVTQHTYSVD 225 + Y A YL +T I+ ++E S T T S Sbjct: 396 N-MTPYMTAALFYLAITLPLIKVVGSIEKRMEQSETGQTASTK 437 >gi|283853410|ref|ZP_06370656.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] gi|283571223|gb|EFC19237.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] Length = 269 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 116/201 (57%), Gaps = 2/201 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I+VT + S ++L+ G + RI + I+LI YV I RG PLLVQLF I+Y Sbjct: 68 GILVTFQVTVCSIALALVFGLVTGLGRIS-RNKHINLIASTYVEIVRGVPLLVQLFYIYY 126 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 L V D +A ++S+++ + AY+ E+ R+ II+IP GQ +A+ ++G R QT+ H+ Sbjct: 127 ALGRFVHVPD-LLAAVLSMSVCYGAYMGEVFRAGIIAIPVGQTEAARSLGFNRAQTMYHV 185 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ T P+ +EFI++LK TS+ S + + ++ + + S ++Q + +A +Y Sbjct: 186 ILPQAWRTILPPVGNEFIALLKDTSLVSILGVADLLRRGREYASESFQYFETFTMVAVIY 245 Query: 200 LILTSFCYIIQIKIESSVTQH 220 LI+T + +E ++ H Sbjct: 246 LIITLILSKLVSIMEERLSHH 266 >gi|257093639|ref|YP_003167280.1| polar amino acid ABC transporter inner membrane subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046163|gb|ACV35351.1| polar amino acid ABC transporter, inner membrane subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 217 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 64/184 (34%), Positives = 115/184 (62%), Gaps = 5/184 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + ISFV+++ +G +A++RI ++S +++ Y+W+ RGTPL++Q+ I++ LP Sbjct: 17 VTLQVFLISFVLAVPLGLVLALVRIS-RFVVLSGLVNGYIWLMRGTPLMLQMLFIYFALP 75 Query: 83 H---IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 IG+ F A I++ LN++AY +EI R+ I SI +GQ++ + +GL+ QT+R I Sbjct: 76 FVPVIGVRLPDFPAAIVAFVLNYAAYFAEIFRAGIQSIDRGQYEGARVLGLSYPQTMRRI 135 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + P+S+E I+++K TS+ + + ++ + A+ IV + AF Y Sbjct: 136 VLPQVLKRILPPMSNETITLVKDTSLIYVLAMNDLLRAARGIVQRDFTTTPFVVAAAF-Y 194 Query: 200 LILT 203 L++T Sbjct: 195 LVMT 198 >gi|302540996|ref|ZP_07293338.1| amino acid ABC transporter, permease PEB1 [Streptomyces hygroscopicus ATCC 53653] gi|302458614|gb|EFL21707.1| amino acid ABC transporter, permease PEB1 [Streptomyces himastatinicus ATCC 53653] Length = 216 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 69/197 (35%), Positives = 114/197 (57%), Gaps = 8/197 (4%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIFYG 80 T+ ++ + ++G IA IR + I ++ F Y+ IFRGTPLLVQ+ I++G Sbjct: 20 TVELSAAAIAACTLLGLVIAAIR----TSRIPVLAQFARCYLEIFRGTPLLVQMLFIYFG 75 Query: 81 LPHIGIVFDS-FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 ++GI S F A +++LTL AY++EI RS I ++P+GQW+A+ +GL+R QT + Sbjct: 76 AAYLGIGNISVFGAALLALTLFQGAYVAEIFRSGIEAVPRGQWEAARVLGLSRVQTFGTV 135 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQT PL +++S++K TS+A I E+ + Q IV P + Y +A +Y Sbjct: 136 ILPQTRAIVLPPLVGQYLSLVKDTSIAVVIGYAELLREGQAIVDRDGHPGMAYLAIAVLY 195 Query: 200 LILTSFCYIIQIKIESS 216 ++ S ++ ++E Sbjct: 196 FVICSPLSVVVRRMERK 212 >gi|163938565|ref|YP_001643449.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] gi|229131585|ref|ZP_04260468.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST196] gi|163860762|gb|ABY41821.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] gi|228651876|gb|EEL07830.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST196] Length = 214 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 104/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + ++S ++ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILR-YMKIPVVSQVLGIIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A+I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVGISLPELMHNAQ 176 >gi|237751712|ref|ZP_04582192.1| amino acid ABC transporter ATP-binding protein [Helicobacter bilis ATCC 43879] gi|229373078|gb|EEO23469.1| amino acid ABC transporter ATP-binding protein [Helicobacter bilis ATCC 43879] Length = 234 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 119/207 (57%), Gaps = 12/207 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + +I +TL + I +++G +A +R+ I++ ++ Y+ I RGTPLL+QL V Sbjct: 35 FKSIGITLILTTGGVFIGIVVGVLLAFLRML-QIRILNFLIDEYIDILRGTPLLIQLLVF 93 Query: 78 FYGLPHIGIVF----DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 Y IVF D+F+A ++++ LN SAYI+EI+R+ I S+ KGQ DA A+GLT Sbjct: 94 AY------IVFATLNDNFLAALVAIGLNSSAYIAEIVRAGIQSVDKGQMDAGRAMGLTHS 147 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 T+RHII+PQ I L++EFI + K TSV I++ ++ A+ + + Y P Sbjct: 148 ATMRHIIMPQAIKNILPSLANEFIVVFKETSVVGLISVNDLTMQAKALQAVLYNPTPYIF 207 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQH 220 F Y+ + F ++ ++ +E + +H Sbjct: 208 AGVFYYMCVKIFSWLTKL-LERELHKH 233 >gi|77461682|ref|YP_351189.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77385685|gb|ABA77198.1| amino acid ABC transporter membrane protein 2, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 216 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 62/184 (33%), Positives = 112/184 (60%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ ++F+ I+G I ++RI + + S I ++ +F+GTPLL+QLF++F+G+ Sbjct: 20 TLALSLVAFIGGGIVGLLILIMRIS-KNPLPSSIARTWIELFQGTPLLMQLFLVFFGVAL 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 G+ ++A I+LTL SAY++EI R + +IP GQW+AS ++ L + +R++ILPQ Sbjct: 79 AGVEISPWMAAAIALTLFTSAYLAEIWRGCVEAIPHGQWEASSSLALNPLEQLRYVILPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T+V S I E+ +T + + T++P ++Y +A Y +L Sbjct: 139 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGGMLANATFEPFMVYGLVALGYFLL- 197 Query: 204 SFCY 207 CY Sbjct: 198 --CY 199 >gi|293365081|ref|ZP_06611798.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus oralis ATCC 35037] gi|307702210|ref|ZP_07639170.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus oralis ATCC 35037] gi|315612852|ref|ZP_07887763.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis ATCC 49296] gi|322374624|ref|ZP_08049138.1| amino acid ABC transporter, permease protein [Streptococcus sp. C300] gi|331266721|ref|YP_004326351.1| ABC transporter membrane-spanning permease-polar amino acid transport system; glutamine transport,putative [Streptococcus oralis Uo5] gi|291316531|gb|EFE56967.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus oralis ATCC 35037] gi|307624223|gb|EFO03200.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus oralis ATCC 35037] gi|315314962|gb|EFU63003.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis ATCC 49296] gi|321280124|gb|EFX57163.1| amino acid ABC transporter, permease protein [Streptococcus sp. C300] gi|326683393|emb|CBZ01011.1| ABC transporter membrane-spanning permease-polar amino acid transport system; glutamine transport,putative [Streptococcus oralis Uo5] Length = 227 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 72/227 (31%), Positives = 123/227 (54%), Gaps = 19/227 (8%) Query: 6 FNLIIDSFPQLLYAAIV---VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 F+ + P Y A++ +++ + C+ +I +++ F R F + + YV Sbjct: 3 FSFLPKYLPYFNYGALITVLISILVVCLGTIIGVLLAF---AQRSRFKPLV--WFANVYV 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 WIFRGTP++VQ+ + F L HI G+ + I+ +++N AY+SE +R+ Sbjct: 58 WIFRGTPMMVQIMIAF-ALMHINAPTIQVGILGVDLSRLIPGILIISMNSGAYVSETVRA 116 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++PKGQ +A+Y++G+ K +R++ILPQ I L +EFI+I+K +S+ S I + Sbjct: 117 GINAVPKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVM 176 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 E++ A + +TTY PL AF YLI+TS + E + Q Sbjct: 177 ELWNGATTVATTTYLPLTPLLFAAFYYLIMTSVLTVALKAFEKHIGQ 223 >gi|16800918|ref|NP_471186.1| hypothetical protein lin1851 [Listeria innocua Clip11262] gi|16414353|emb|CAC97082.1| lin1851 [Listeria innocua Clip11262] Length = 213 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 63/173 (36%), Positives = 105/173 (60%), Gaps = 2/173 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + I++ P LL A TL + ++ V S+ +G +AV I + I++ Y+WI R Sbjct: 2 DYIMEILPALLDGA-KTTLLVFVVTLVCSIPLGAIVAVGNIS-KIAPLKFILNIYIWIMR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL I+YGLP IG+VFD A+ I+ LN++AY +EI R +SI GQ++++ Sbjct: 60 GTPLLLQLIFIYYGLPIIGVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENGQYESAK 119 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +GLT QT+R I+LPQ + + +E I+++K +S+ + I ++ + + Sbjct: 120 VLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGK 172 >gi|310642316|ref|YP_003947074.1| amino acid abc transporter, permease protein, his/glu/gln/arg/opine family [Paenibacillus polymyxa SC2] gi|309247266|gb|ADO56833.1| Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Paenibacillus polymyxa SC2] Length = 487 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 74/201 (36%), Positives = 122/201 (60%), Gaps = 5/201 (2%) Query: 7 NLIIDSFPQL--LYA-AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 N I+D F + YA I TL ++ + + IIG I+++R+ II + YV Sbjct: 268 NSIVDIFLKYRSFYATGIGYTLLLSALGVLFGFIIGLIISLLRMS-GIRIIEWLGTAYVE 326 Query: 64 IFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I RGTP+LVQL +I YG+ +G+ F + II+L+LN SAY++EI R+ I ++ +GQ Sbjct: 327 ILRGTPMLVQLMIIHYGVALTLGVNFTPLQSGIITLSLNSSAYLAEIFRAGIQAVDRGQM 386 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ ++G+ R + +RH+ILPQ + + +EFI+I+K +S+ STI + +I AQ I Sbjct: 387 EAARSLGMGRGKAMRHVILPQAFKSILPAIGNEFITIIKESSIISTIGMVDIMYQAQVIK 446 Query: 183 STTYQPLIIYCELAFVYLILT 203 + TY+ L + A +Y ++T Sbjct: 447 NITYEGLSPFVIAAAIYFVMT 467 >gi|227823072|ref|YP_002827044.1| putative transmembrane component of ABC transporter [Sinorhizobium fredii NGR234] gi|227342073|gb|ACP26291.1| putative transmembrane component of ABC transporter [Sinorhizobium fredii NGR234] Length = 215 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 62/184 (33%), Positives = 105/184 (57%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ ++F +G I RI + Y+ +F+GTPLL+QLF++F+GLP Sbjct: 20 TLLLSIVAFAGGAAVGLLILFARIA-KRPWLRRFGAGYIALFQGTPLLMQLFLMFFGLPM 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G + + A + LT SAY++EI R + ++P+GQWDA ++GL Q +R +ILPQ Sbjct: 79 LGFRIEPWTAAALGLTFYASAYLAEIWRGGVEALPRGQWDAGASLGLHYLQELRLVILPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + P + ++KST++ S I E+ +TA I + T++P +Y +A ++ +L Sbjct: 139 AFAITRPPAVGFLVQLIKSTALTSIIGFEELLRTANAINNATFEPFTVYGLVAAIFFVL- 197 Query: 204 SFCY 207 CY Sbjct: 198 --CY 199 >gi|260441513|ref|ZP_05795329.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae DGI2] gi|291044876|ref|ZP_06570585.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291011770|gb|EFE03766.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] Length = 219 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 72/221 (32%), Positives = 122/221 (55%), Gaps = 12/221 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-----IRIFFSDTIISLIMHFYVW 63 +ID+ P+ AA +TL ++ V+SL+ G +AV IR F++ + Y+ Sbjct: 6 LIDAVPKFADAA-KLTLELSVYGVVLSLLFGLPVAVVTAYRIRPFYA------LARAYIE 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + R TPLL+QLF ++YGLP +GI +D F +I+L ++Y++E +R+ I+++PKGQ Sbjct: 59 LSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVIALVFLGASYMAEAVRADILAVPKGQVG 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A AIGL+R Q R++ LPQ + + + + ++K TSV ST+ I E+ + ++ Sbjct: 119 AGKAIGLSRFQVFRYVELPQVWAVAVPAIGANILFLMKETSVVSTVGIAELLFVTKDVIG 178 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 Y+ L YLI+ ++ +IE+ V Y V Sbjct: 179 MDYKTNEALFLLFAAYLIILLPVSLLARRIENRVRSAKYGV 219 >gi|238761693|ref|ZP_04622668.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia kristensenii ATCC 33638] gi|238700207|gb|EEP92949.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia kristensenii ATCC 33638] Length = 220 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 119/203 (58%), Gaps = 10/203 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI--- 57 M E+F L+ P L+ A VT C V++++ GFFI V+ I+ ++ S Sbjct: 1 MMGEFFQLLKSWLPMLIDGA--VTTASLC---VVAIVAGFFIGVV-IYLMESGHSRFGRG 54 Query: 58 -MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 Y+ +FRGTP+L Q+ + FY +G+ ++A +++LTLN +AY S+I+RS + Sbjct: 55 FARVYISLFRGTPVLAQVLLCFYLPGELGLSLPGYLAAVMALTLNTAAYQSQILRSGFAA 114 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP GQ +A+ GL+ +QT+ +I +PQ + + L SE I ++K+++V S I I ++ + Sbjct: 115 IPPGQLEAAAMCGLSSRQTLWYIQIPQVLRLTMPSLISELIDVIKASAVVSVIAITDLMR 174 Query: 177 TAQRIVSTTYQPLIIYCELAFVY 199 Q++ S TY+PL +Y +A Y Sbjct: 175 VGQQLASATYRPLEVYIAIALSY 197 >gi|168218287|ref|ZP_02643912.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens NCTC 8239] gi|182379709|gb|EDT77188.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens NCTC 8239] Length = 213 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 73/210 (34%), Positives = 124/210 (59%), Gaps = 3/210 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N II P ++ + TL + ++ ++S+ +G +A++R+ + I++ I YV + R Sbjct: 2 NYIITLMPSII-EGLKNTLGVFILTLLLSIPLGIIVAILRLS-NIKIVNFISSLYVLVMR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL IF+GLP IG+ D F A II+ TLN++AY EI RS I I +GQ++AS Sbjct: 60 GTPLLLQLIFIFFGLPIIGVSIDRFPAAIIAFTLNYAAYFGEIFRSGIKDIDRGQFEASK 119 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +GL++ T + IILPQ+ + +++E I+++K TS+ + I E+ + A +I S Sbjct: 120 ILGLSKWFTFKKIILPQSFKKTLPSIANEVITLVKDTSLVYVVGIGELLR-AGKIASNRD 178 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESS 216 L+ + +YL+L + I ++E Sbjct: 179 ASLLPLFSIGIIYLLLIAVLTKIFDRLEKK 208 >gi|121610275|ref|YP_998082.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121554915|gb|ABM59064.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 217 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 113/198 (57%), Gaps = 1/198 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ ++F+ I G IA+ R + ++ L F +F+GTPLL+QLF+ F+G P Sbjct: 19 TVLLSLVAFIGGAIGGLAIALSRTSGNVVLVRLSTAFTQ-VFQGTPLLMQLFLAFFGAPI 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G ++A I+L LN SA++ EI R I +IPKGQW+A+YA+GL +R ++LPQ Sbjct: 78 LGFEVSPWLAASIALILNTSAFLGEIWRGCIQAIPKGQWEAAYALGLNYVPRMRLVVLPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + P + +LK TS+A+ I EI + Q I + T+QPLI++ + +Y L Sbjct: 138 AWQIALPPTVGYLVQVLKGTSLAAIIGFTEITRAGQIINNATFQPLIVFSVVGAIYFALC 197 Query: 204 SFCYIIQIKIESSVTQHT 221 ++ ++E + T Sbjct: 198 WPLSLLAGRMERQLKLAT 215 >gi|123441155|ref|YP_001005143.1| ABC transporter, inner-membrane component [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088116|emb|CAL10904.1| ABC transporter, inner-membrane component [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 219 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 114/199 (57%), Gaps = 8/199 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF--- 60 E+F L+ P L+ A VT CI ++++ GFFI V+ L F Sbjct: 3 EFFQLLRSWLPMLIDGA--VTTASLCI---VAIVAGFFIGVVIYLMESGHSRLGRGFARI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ +FRGTP+L Q+ + FY +G+ ++A +++LTLN +AY S+I+RS +IP G Sbjct: 58 YISLFRGTPVLAQVLLCFYLPGELGLSLPGYLAAVLALTLNTAAYQSQILRSGFNAIPPG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ GL+ +Q + HI +PQ + + L SE I ++K+++V S I I ++ + Q+ Sbjct: 118 QLEAAAMCGLSPRQALWHIQIPQVLRLTLPSLISELIDVIKASAVVSVIAITDLMRVGQQ 177 Query: 181 IVSTTYQPLIIYCELAFVY 199 + S TY+PL +Y +A Y Sbjct: 178 LASATYRPLEVYIAIALSY 196 >gi|121606946|ref|YP_984275.1| polar amino acid ABC transporter inner membrane subunit [Polaromonas naphthalenivorans CJ2] gi|120595915|gb|ABM39354.1| amino acid ABC transporter membrane protein 2, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 216 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 63/183 (34%), Positives = 106/183 (57%), Gaps = 1/183 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+ T+ ++ I+F I+G + + R+ + YV +F+GTPLL+QLF+ ++ Sbjct: 16 ALRWTVALSLIAFAGGGIVGLVLLIARLSKLPGAARCV-ALYVQVFQGTPLLMQLFLTYF 74 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GL +GI + A + LTL SAY++EI R ++SIP+GQW+A+ ++ + + +RHI Sbjct: 75 GLSMLGIDTSALFAASVCLTLYASAYLTEIWRGCVLSIPRGQWEAAASLAMNFGEQLRHI 134 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + P I I+K T++AS I EI + Q I + TY+P ++Y + +Y Sbjct: 135 VLPQAARIAIGPTVGFLIQIIKGTALASVIGFVEITKAGQMIANATYEPFLVYGCVGLMY 194 Query: 200 LIL 202 L Sbjct: 195 FAL 197 >gi|319782220|ref|YP_004141696.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168108|gb|ADV11646.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 219 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 110/187 (58%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W N + + P L+ + +T+ + V++ I+G IA+ R + +S + + Sbjct: 1 MEWDW-NFVWEIMPTLI-QGVKITILATLLGSVLAAIVGLGIALAR-RSPNKALSRTVGW 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL+ IFY LP IGI+ VA +I L L++ Y +E+ R+ I ++P+G Sbjct: 58 AAEFIRGTPLLVQLYFIFYVLPDIGILLPPLVAGVIGLGLHYGTYTAEVYRAGIDNVPRG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A L+ QT HII+PQ I L++ FI++ K T + S IT+ E+ A+ Sbjct: 118 QWEAAKACNLSASQTWTHIIIPQAIPPMIPALANYFIAMFKETPLLSAITVLELMNQAKS 177 Query: 181 IVSTTYQ 187 + +T Y+ Sbjct: 178 VANTYYR 184 >gi|251799197|ref|YP_003013928.1| polar amino acid ABC transporter inner membrane protein [Paenibacillus sp. JDR-2] gi|247546823|gb|ACT03842.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. JDR-2] Length = 262 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 71/228 (31%), Positives = 134/228 (58%), Gaps = 10/228 (4%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M+Y + N + D P+LL + + +TL I + + L++GF +A+ R++ + ++ M Sbjct: 1 MEYGFDINYVFDFIPKLL-STLNITLLIVAGAIGLGLLVGFLVALPRLYNVPVLRNVSM- 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVA-------IIISLTLNFSAYISEIIRS 112 YV FRGTP+L+QLF+ +YGLP I + ++ +I++ LN AY+SE IR+ Sbjct: 59 VYVSFFRGTPVLIQLFLFYYGLPEILKLVSIDISKLPVLYFVILTFGLNVGAYVSETIRA 118 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +++++ +GQ +A+YA+G+T Q I+LPQ + + ++ I++LK TS+A T+ + Sbjct: 119 AVLAVNRGQVEAAYAVGMTGYQAFTRIVLPQAVGIAVPVFTNLVIAMLKDTSLAFTLGVM 178 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E+ AQ + S + + Y LA +YL+++ + + E +++H Sbjct: 179 EMTGKAQTLGSLSQHFIETYIALALIYLVMSIVLERLMLLAERRLSRH 226 >gi|59802319|ref|YP_209031.1| putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae FA 1090] gi|194099717|ref|YP_002002852.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae NCCP11945] gi|239999906|ref|ZP_04719830.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae 35/02] gi|240013147|ref|ZP_04720060.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae DGI18] gi|240015590|ref|ZP_04722130.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae FA6140] gi|240081802|ref|ZP_04726345.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae FA19] gi|240114081|ref|ZP_04728571.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae MS11] gi|240114680|ref|ZP_04728742.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae PID18] gi|240116882|ref|ZP_04730944.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae PID1] gi|240120218|ref|ZP_04733180.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae PID24-1] gi|240126636|ref|ZP_04739522.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae SK-92-679] gi|240127226|ref|ZP_04739887.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae SK-93-1035] gi|254492736|ref|ZP_05105907.1| amino acid ABC transporter [Neisseria gonorrhoeae 1291] gi|268595715|ref|ZP_06129882.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae 35/02] gi|268597901|ref|ZP_06132068.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae FA19] gi|268600151|ref|ZP_06134318.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae MS11] gi|268600324|ref|ZP_06134491.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae PID18] gi|268602556|ref|ZP_06136723.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae PID1] gi|268685217|ref|ZP_06152079.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae SK-92-679] gi|268685585|ref|ZP_06152447.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae SK-93-1035] gi|293397954|ref|ZP_06642160.1| polar amino acid transport system permease [Neisseria gonorrhoeae F62] gi|59719214|gb|AAW90619.1| putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae FA 1090] gi|193935007|gb|ACF30831.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae NCCP11945] gi|226511776|gb|EEH61121.1| amino acid ABC transporter [Neisseria gonorrhoeae 1291] gi|268549104|gb|EEZ44522.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae 35/02] gi|268551689|gb|EEZ46708.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae FA19] gi|268584282|gb|EEZ48958.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae MS11] gi|268584455|gb|EEZ49131.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae PID18] gi|268586687|gb|EEZ51363.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae PID1] gi|268625501|gb|EEZ57901.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae SK-92-679] gi|268625869|gb|EEZ58269.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae SK-93-1035] gi|291611900|gb|EFF40969.1| polar amino acid transport system permease [Neisseria gonorrhoeae F62] gi|317165201|gb|ADV08742.1| putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae TCDC-NG08107] Length = 219 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 72/221 (32%), Positives = 122/221 (55%), Gaps = 12/221 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-----IRIFFSDTIISLIMHFYVW 63 +ID+ P+ AA +TL ++ V+SL+ G +AV IR F++ + Y+ Sbjct: 6 LIDAVPKFADAA-KLTLELSVYGVVLSLLFGLPVAVVTAYRIRPFYA------LARAYIE 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + R TPLL+QLF ++YGLP +GI +D F +I+L ++Y++E +R+ I+++PKGQ Sbjct: 59 LSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVIALVFLGASYMAEAVRAGILAVPKGQVG 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A AIGL+R Q R++ LPQ + + + + ++K TSV ST+ I E+ + ++ Sbjct: 119 AGKAIGLSRFQVFRYVELPQVWAVAVPAIGANILFLMKETSVVSTVGIAELLFVTKDVIG 178 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 Y+ L YLI+ ++ +IE+ V Y V Sbjct: 179 MDYKTNEALFLLFAAYLIILLPVSLLARRIENRVRSAKYGV 219 >gi|322373784|ref|ZP_08048319.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus sp. C150] gi|321277156|gb|EFX54226.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus sp. C150] Length = 516 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 121/222 (54%), Gaps = 11/222 (4%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF--FSDTIISLIMHFYVWI----- 64 ++PQ L +TL I+ + V+ IG I V R ++ +++L+ + WI Sbjct: 291 NWPQFLRG-TGITLLISIVGTVVGTFIGLMIGVYRTAPKAANKLVALLQKVFGWILNVYI 349 Query: 65 --FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 FRGTP++VQ VI+YG GI D +A +I +++N AY+SEI+R I ++ KGQ Sbjct: 350 EVFRGTPMIVQSMVIYYGTAQAFGINIDRTLAAVIIVSINTGAYMSEIVRGGIFAVDKGQ 409 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++A+ A+G + QT+R I+LPQ I +EF+ +K TSV + I++ E++ + Sbjct: 410 FEAATALGFSHGQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVVELYFAGNTV 469 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + TYQ + +A +Y +LT I +E Q TY+ Sbjct: 470 ATQTYQYFQTFFVIAAIYFVLTFTVTRILRYVERRFDQDTYT 511 >gi|296274225|ref|YP_003656856.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter nitrofigilis DSM 7299] gi|296098399|gb|ADG94349.1| polar amino acid ABC transporter, inner membrane subunit [Arcobacter nitrofigilis DSM 7299] Length = 321 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 124/209 (59%), Gaps = 10/209 (4%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIR----IFFSDTIISLIMHFYVWIFRGTP 69 P + + +TL I+ + V++ IG +A ++ +F D + YV I RGTP Sbjct: 113 PGPILNGLWITLKISFFAAVLTFFIGIIVAFMKLSPIVFIKD-----LATVYVTIVRGTP 167 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LLVQ+F+ ++ + +I FD FVA ++SL + F AY++EI+R +I SI KGQ +AS ++G Sbjct: 168 LLVQIFLFYFIVANI-FEFDRFVAGVLSLGIFFGAYMAEILRGAIQSIDKGQLEASKSLG 226 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 ++ Q +R+IILPQ + L E I+++K +S+ S I+I ++ + + IV+ T+ P Sbjct: 227 ISNFQAMRYIILPQAFKRALPTLIGEMIALVKDSSLVSVISITDLTKVGKEIVANTFSPF 286 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVT 218 + +A +YL +TS I +IE +T Sbjct: 287 ETWIIVALLYLCITSVLSFIGHRIEKKMT 315 >gi|296156610|ref|ZP_06839448.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295893209|gb|EFG72989.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 331 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 73/193 (37%), Positives = 111/193 (57%), Gaps = 23/193 (11%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-- 81 TL + S I +I+G A++R S+ I+S Y+WIFRGTPLLVQL + +Y L Sbjct: 84 TLGLTAASMAIGMILGVIAALMRQS-SNPIVSAFAALYIWIFRGTPLLVQL-IFWYNLAA 141 Query: 82 --PHIGIVFDSF---------------VAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 P I + F VA ++ L LN AY++EI+RS ++S+ GQ +A Sbjct: 142 LYPQIDLGLPFFAPIASLQTNSIVTPIVAALLGLGLNEGAYMAEIVRSGLLSVDPGQREA 201 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +Y++GL+ +TIR IILPQ + P +E + +LK+TS+ ST+ I ++ +AQ I S Sbjct: 202 AYSLGLSPARTIRRIILPQALRVIVPPTGNEIVGMLKATSLVSTLAIGDLLYSAQGIYSR 261 Query: 185 TYQ--PLIIYCEL 195 T++ PL+I L Sbjct: 262 TFETIPLLIVASL 274 >gi|315649608|ref|ZP_07902693.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Paenibacillus vortex V453] gi|315275081|gb|EFU38456.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Paenibacillus vortex V453] Length = 220 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 75/218 (34%), Positives = 127/218 (58%), Gaps = 6/218 (2%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFY 61 ++W N + D P+LL +A+ +T+ + +FV++LIIG +A R + +SL+ Sbjct: 2 WDW-NYVFDILPELL-SALKMTVWVTLCAFVVALIIGLLLAFAARSQWKP--VSLMTKGI 57 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + R TPLLVQ+F ++Y LP + GI +F A +I L L++S Y+SE+ RS I +PKG Sbjct: 58 IEFIRNTPLLVQVFFLYYSLPLLTGISIPAFYAGVIGLGLHYSTYLSEVYRSGIEGVPKG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A+ T+ QT R IILPQ + L + I + K T + IT+ E+ TA+ Sbjct: 118 QWEAATALNYTKTQTWRSIILPQAVPPIIPVLGNYLIVMFKETPILCAITLVEMMLTAKN 177 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 IVS +++ Y + ++LI++ ++ ++E + Sbjct: 178 IVSQSFRAFEPYTLVGILFLIISYIASLLVQRLEKRMN 215 >gi|110633917|ref|YP_674125.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110284901|gb|ABG62960.1| amino acid ABC transporter membrane protein 2, PAAT family [Chelativorans sp. BNC1] Length = 265 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 120/212 (56%), Gaps = 12/212 (5%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VT+ + IS + ++ IAV R S +IS + + YV+ FRGTPLL Q F+I+ Sbjct: 53 SGLWVTIQLVVISILAGAVLSVPIAVGRRAESR-VISSLAYAYVYFFRGTPLLAQTFLIY 111 Query: 79 YGL----PHIGIVF------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 YGL P + V D++ I + TLN +AY +EI+R ++ S+ +GQW+A+ A+ Sbjct: 112 YGLGSFRPQLEAVGLWTFFRDAWFCAIFAFTLNTAAYQAEILRGAVESVGRGQWEAAAAL 171 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 +R QT+R IILPQ + + P +E I ++K +++ + IT+ ++ +R S T+ Sbjct: 172 AFSRWQTLRKIILPQALLVALRPYGNEIILMIKGSAIVAIITVYDLMGETRRAFSRTFD- 230 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y A +YL+L I +IE +T+H Sbjct: 231 FQTYIWAALIYLVLVELLRIATERIERRLTRH 262 >gi|296876379|ref|ZP_06900431.1| arginine/histidine ABC superfamily ATP binding cassette transporter permease [Streptococcus parasanguinis ATCC 15912] gi|296432669|gb|EFH18464.1| arginine/histidine ABC superfamily ATP binding cassette transporter permease [Streptococcus parasanguinis ATCC 15912] Length = 754 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 70/219 (31%), Positives = 123/219 (56%), Gaps = 9/219 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + L+ +++ QLL + + VTL +A +SF I+++IG + + + +V + Sbjct: 537 WGLLQNNYKQLL-SGLGVTLALALLSFAIAMVIGVIFGMFSVS-PYKWLRWTAEIFVDVI 594 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RG PL++ IF+G+P++ + FVA I+L+LN +AYI+EI+R I ++P Sbjct: 595 RGIPLMILAAFIFWGIPNLIESVTGHQSPINDFVAGTIALSLNAAAYIAEIVRGGIQAVP 654 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+FQT Sbjct: 655 IGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTG 714 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + I++ YQ +Y LA YL++ + K+E V Sbjct: 715 KIIIARNYQSFKMYAILAVFYLVIITLLTRFAKKLEKKV 753 >gi|153010841|ref|YP_001372055.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151562729|gb|ABS16226.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 239 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 117/199 (58%), Gaps = 11/199 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D+F Q+L + +TL +A S V I+ A++R+ ++ I YV++FRGTPL Sbjct: 8 DAFFQML-GGVPLTLKLAATSIVFGAILALLFALMRLS-GIKVLDWIARLYVFVFRGTPL 65 Query: 71 LVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIISIPKGQ 121 LVQ+F+I+YGL + SF+ II+LTLN +AY SEIIR ++S+P GQ Sbjct: 66 LVQIFIIYYGLSQFPAIRYSFLWPVLREPYWCAIIALTLNNAAYASEIIRGGLLSVPHGQ 125 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ A G++ R I++P + + +E IS++K+TS+AS IT+ E+ A ++ Sbjct: 126 IEAAKACGMSSFTCFRRIVMPLAVRQALPGYGNEMISMIKATSLASIITLMEVTGIAAKL 185 Query: 182 VSTTYQPLIIYCELAFVYL 200 ++ +Y+ + I+ +YL Sbjct: 186 IAESYRAIEIFVIAGAIYL 204 >gi|288555160|ref|YP_003427095.1| glutamine ABC transporter permease [Bacillus pseudofirmus OF4] gi|288546320|gb|ADC50203.1| glutamine ABC transporter permease [Bacillus pseudofirmus OF4] Length = 220 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 106/181 (58%), Gaps = 8/181 (4%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-G 85 I + I +IG FI + R+ + I I YV + RGTP+LVQ+ I++G P + G Sbjct: 28 ITLVGVAIGFVIGAFIGLARVS-KNKFIYGIATVYVEVIRGTPILVQILFIYFGFPDLLG 86 Query: 86 IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTI 145 I D A II++ LN AYI+EI+R S+ SI KGQ +A ++GL+ QT+R+II PQ + Sbjct: 87 ITLDKVTASIIAIALNAGAYIAEIVRGSVESIEKGQREAGRSLGLSSSQTMRYIIWPQAL 146 Query: 146 TTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPLIIYCELAFVYLIL 202 PL ++FI LK TS+ S I + E+ ++ S T ++P ++ C L YL++ Sbjct: 147 RRMIPPLGNQFIISLKDTSLFSVIAVGELLYQGRQYASATFTYFEPYLMVCVL---YLMI 203 Query: 203 T 203 T Sbjct: 204 T 204 >gi|319944973|ref|ZP_08019235.1| amino acid ABC superfamily ATP binding cassette transporter transmembrane protein [Lautropia mirabilis ATCC 51599] gi|319741543|gb|EFV93968.1| amino acid ABC superfamily ATP binding cassette transporter transmembrane protein [Lautropia mirabilis ATCC 51599] Length = 262 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 70/213 (32%), Positives = 119/213 (55%), Gaps = 8/213 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 +L +T+ + +S V L++G A+ R+ I I FY+W+ RGTPLLVQ+ Sbjct: 52 ELFAEGSRITVYLTLVSGVAGLVLGVLGALGRLSRIPPI-RWIASFYIWVIRGTPLLVQV 110 Query: 75 FVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 +F LP + + D F + ++L N AY +E IR+ ++++P+GQ +A+ ++GL+ Sbjct: 111 LFVFLALPELLPWLKLDDFTSACVALAFNAGAYNAESIRAGLLAVPRGQTEAARSLGLSN 170 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 T +I PQ + PL + FI++LK +S+A I + E+ A RI S+T+QP+ Sbjct: 171 WHTFWDVIFPQAFKIALPPLVNNFIALLKDSSLAYAIGVVELTNVANRIQSSTFQPIPPL 230 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 A +YL+LT+ + QI S+ +H V+ Sbjct: 231 VTAAVIYLLLTTV--LTQI---STAVEHRMDVE 258 >gi|300718192|ref|YP_003742995.1| polar amino acid ABC transporter inner membrane subunit [Erwinia billingiae Eb661] gi|299064028|emb|CAX61148.1| polar amino acid ABC transporter, inner membrane subunit [Erwinia billingiae Eb661] Length = 221 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 67/217 (30%), Positives = 127/217 (58%), Gaps = 3/217 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W II + P L ++VTL + ++ + SLI G +A++ + + ++ FY Sbjct: 2 DW-QAIITAAPSL-GQGMLVTLQLCVVAAIASLIAGSTLALL-LMRAAPFWQPLLRFYSS 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + G PLLV ++++++ LP I S V +++LTL ++ YI++++R+ + ++P+GQW+ Sbjct: 59 VTLGLPLLVVIYLLYFVLPEYDITLSSPVVGVVALTLYYAPYIAQVLRAGLEALPRGQWE 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AS +GL R +T +ILPQT+ PL I ++K +++ S +++PE A++ +S Sbjct: 119 ASRVLGLGRFRTFSDVILPQTLPQMLSPLVGLLIGLIKDSALLSVVSVPEFMYAAKQAIS 178 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TY PL IY +A +Y +L S + + E +T++ Sbjct: 179 ETYAPLEIYLAVALIYWLLCSVIDHLARRAERRMTRY 215 >gi|229056417|ref|ZP_04195830.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH603] gi|228720891|gb|EEL72440.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH603] Length = 214 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 73/199 (36%), Positives = 118/199 (59%), Gaps = 2/199 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + ++S I+ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILR-YMKIPVVSQILGIIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITATIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI-IYCEL 195 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ I +I + + Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQIISGQNVNYMIPTFIVV 193 Query: 196 AFVYLILTSFCYIIQIKIE 214 A +Y IL I+ ++E Sbjct: 194 ACMYFILNYSLSILSRRLE 212 >gi|260460035|ref|ZP_05808288.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Mesorhizobium opportunistum WSM2075] gi|259034246|gb|EEW35504.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Mesorhizobium opportunistum WSM2075] Length = 219 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 121/215 (56%), Gaps = 10/215 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + + P L+ + +T+ + V++ I+G IA+ R + +S + + Sbjct: 1 MEWDW-DFVRQILPTLI-QGVKITILATLLGSVLAAIVGLGIALAR-RSPNKALSRTVGW 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL+ IFY LP IGI+ VA +I L L++ Y +E+ R+ I ++P+G Sbjct: 58 AAEFIRGTPLLVQLYFIFYVLPDIGILLPPLVAGVIGLGLHYGTYTAEVYRAGIDNVPRG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A L+ +QT HII+PQ I L++ FI++ K T + S IT+ E+ A+ Sbjct: 118 QWEAAKACNLSGRQTWSHIIIPQAIPPMIPALANYFIAMFKETPLLSAITVLELMNQAKS 177 Query: 181 IVSTTYQPLIIYCE---LAFVYLILTSFCYIIQIK 212 + +T Y+ Y E L + + S C +I ++ Sbjct: 178 VANTYYR----YIEPITLVGAFFLAISLCSVILLR 208 >gi|124027569|ref|YP_001012889.1| glutamine transport system permease protein glnP [Hyperthermus butylicus DSM 5456] gi|123978263|gb|ABM80544.1| glutamine transport system permease protein glnP [Hyperthermus butylicus DSM 5456] Length = 233 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 110/185 (59%), Gaps = 1/185 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 LL I TL + SF + +G IA+ R++ + ++ YV + RGTP+L+QLF Sbjct: 19 LLAEGIRNTLILTAASFTMGFALGTLIAIGRLY-GPRPLRWLLAGYVELIRGTPMLLQLF 77 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +++Y LP GI + A I+ + LN +AY SE +R+S+ ++ GQW+A+ A+G+TR Q Sbjct: 78 ILYYALPQAGISLAAMTAAILGMGLNSAAYQSEYLRASLRAVHTGQWEAALALGMTRWQA 137 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 I IILP + T+ L++E + +LK +S+A + + E+ + I S T+ L +Y + Sbjct: 138 ITSIILPIGLRTAIPALTNELVYLLKYSSIAYFLAVVELVYAGKIIGSETFAYLEVYTII 197 Query: 196 AFVYL 200 A VYL Sbjct: 198 ALVYL 202 >gi|311898324|dbj|BAJ30732.1| putative amino acid ABC transporter permease protein [Kitasatospora setae KM-6054] Length = 346 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 120/213 (56%), Gaps = 27/213 (12%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + ++ ++ ++ G +AV+R+ + ++S Y+WIFRGTP+LVQL +F+ + Sbjct: 72 TLELTALAMLMGVVGGVLLAVMRLS-RNPVLSGTAWLYIWIFRGTPVLVQL--VFWN--N 126 Query: 84 IGIVFDS----------------------FVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 IG+++ F A ++ L LN +AY++EI+R+ I S+ +GQ Sbjct: 127 IGVLWKQISLGVPFGPAFWSQESNTLVPVFTAALLGLGLNEAAYMAEIVRAGIQSVDEGQ 186 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A++A+G++R +R I+LPQ + P +E IS+LK+TS+ I + E+F I Sbjct: 187 AEAAHALGMSRATALRRIVLPQAMRVIIPPTGNETISMLKTTSLVQVIALVELFTAGHDI 246 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + TY+P+ ++ YL+LTS + Q +E Sbjct: 247 ATRTYKPIPAMIAVSIYYLLLTSILTVGQYYLE 279 >gi|194017115|ref|ZP_03055727.1| L-cystine transport system permease protein TcyL [Bacillus pumilus ATCC 7061] gi|194010983|gb|EDW20553.1| L-cystine transport system permease protein TcyL [Bacillus pumilus ATCC 7061] Length = 237 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 76/230 (33%), Positives = 130/230 (56%), Gaps = 15/230 (6%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 ID P L+ + TL IA +S +SL+IG A IR+F ++ ++ YV FRGTP Sbjct: 10 IDQVP-LILKGVPFTLLIALVSMAVSLMIGSVFAFIRLF-RIPVLRQLVTLYVSFFRGTP 67 Query: 70 LLVQLFVIFYGLPHI--------GIVF-----DSFVAIIISLTLNFSAYISEIIRSSIIS 116 L+VQLF FYGLP + G+ F +I+ +L+ +A+++E++RS++++ Sbjct: 68 LIVQLFAFFYGLPFVLTKVNDTFGLTFHPDMVSPLAVALITFSLHSAAHLTEVVRSALLA 127 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + KGQ +A+ +G+T +Q + IILPQ + L ++ I +LK+TS++ TI + EI Sbjct: 128 VDKGQLEAAKIVGMTTRQAMMRIILPQAFVVALPNLGNQLIQLLKATSLSFTIGVLEIMG 187 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 ++ I + YQ L Y A +Y +L+ F + +E V+ + S+ + Sbjct: 188 ISRIIANDGYQFLETYLVSALIYWLLSIFFELAFALLEKRVSVYGRSLGR 237 >gi|15835024|ref|NP_296783.1| amino acid ABC transporter, permease protein [Chlamydia muridarum Nigg] gi|270285190|ref|ZP_06194584.1| amino acid ABC transporter, permease protein [Chlamydia muridarum Nigg] gi|270289209|ref|ZP_06195511.1| amino acid ABC transporter, permease protein [Chlamydia muridarum Weiss] gi|301336586|ref|ZP_07224788.1| amino acid ABC transporter, permease protein [Chlamydia muridarum MopnTet14] gi|7190447|gb|AAF39262.1| amino acid ABC transporter, permease protein [Chlamydia muridarum Nigg] Length = 214 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 114/205 (55%), Gaps = 3/205 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIR-IFFSDTIISLIMHFYVWIFRGTPLLVQ 73 +LL TL I IS V ++G+ I + +F I + +FYV RGTPL +Q Sbjct: 9 KLLLRGCGYTLFITAISLVCGFVLGWGIGTVNSRYFPCRIAKFLGNFYVMAVRGTPLFIQ 68 Query: 74 LFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 + ++++GLP I + VA +I+LT N +AY+SE +R I +IP QW+A+ +G Sbjct: 69 ILIVYFGLPSLIKVNLSPLVAGLIALTFNSAAYLSENVRGGINAIPIQQWEAAKVLGYKA 128 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 Q HI+ PQ L++EF+S++K +S+ + +PE+ + + IV+ P+ +Y Sbjct: 129 SQIFWHILYPQVFKNILPSLTNEFVSLIKESSILMVVGVPELTKVTKDIVARELNPMEMY 188 Query: 193 CELAFVYLILTS-FCYIIQIKIESS 216 A +YL++TS F Y ++ + S Sbjct: 189 LICAGLYLVMTSAFSYFARLSEKES 213 >gi|160895808|ref|YP_001561390.1| polar amino acid ABC transporter inner membrane protein [Delftia acidovorans SPH-1] gi|160361392|gb|ABX33005.1| polar amino acid ABC transporter, inner membrane subunit [Delftia acidovorans SPH-1] Length = 260 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 65/193 (33%), Positives = 104/193 (53%), Gaps = 3/193 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + +S L++G A+ R + + FYVW RGTPLLVQ+ I++ LP Sbjct: 59 TLYLTLVSGAAGLVLGIAAALARTSRT-AALRWAAGFYVWAIRGTPLLVQILFIYFALPV 117 Query: 84 I--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + G+ F A I+L LN AY +E +R+ + ++P+GQ +A+ A+GL R ++ Sbjct: 118 LIPGLNLPDFAAACIALALNVGAYNAEAVRAGLQAVPRGQAEAARALGLPRICVFMDVVF 177 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ S PL S F+++LK +S+A I + E+ RI S T+QP+ + YL+ Sbjct: 178 PQAFKISLPPLVSNFVALLKDSSLAYAIGVVELTNVGNRIQSATFQPVETLVTVGVTYLV 237 Query: 202 LTSFCYIIQIKIE 214 LT+ + +E Sbjct: 238 LTTLVTQVTAAVE 250 >gi|77409325|ref|ZP_00786028.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] gi|77172057|gb|EAO75223.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] Length = 201 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 64/172 (37%), Positives = 108/172 (62%), Gaps = 10/172 (5%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIF-----YGLPHI--GIV---FDSFVAIIISLTLNFS 103 ++++ +FYVW+FRGTP++VQ+ + F LP I G++ F + II ++LN Sbjct: 20 LTILANFYVWVFRGTPMVVQIMIAFAWMHFNNLPTISFGVLDLDFTRLLPGIIIISLNSG 79 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AYISEI+R+ I ++P GQ +A+Y++G+ K T+R++ILPQ L +EFI+I+K + Sbjct: 80 AYISEIVRAGIEAVPSGQIEAAYSLGIRPKNTLRYVILPQAFXNILPALGNEFITIIKDS 139 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 ++ TI + E++ AQ +V+ TY P+ AF YL+LT+ + ++E Sbjct: 140 ALLQTIGVMELWNGAQSVVTATYSPVAPLLFAAFYYLMLTTILSALLKQMEK 191 >gi|332686174|ref|YP_004455948.1| glutamine ABC transporter glutamine-binding protein/ permease [Melissococcus plutonius ATCC 35311] gi|332370183|dbj|BAK21139.1| glutamine ABC transporter, glutamine-binding protein/ permease protein [Melissococcus plutonius ATCC 35311] Length = 210 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 71/181 (39%), Positives = 112/181 (61%), Gaps = 2/181 (1%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ + +SF+ SLIIG + + + + ++ +I YV I RG PL+V F I++GLP Sbjct: 15 VTIELTLLSFIFSLIIGVILGLFSVS-TIKVLRIIASIYVDIIRGIPLMVLAFFIYFGLP 73 Query: 83 HI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 I G F+A +++LTLN SAYISEI+R I +IP GQ +A+ ++GL+ +T++ IIL Sbjct: 74 GILGFNIPVFIAGVVTLTLNSSAYISEIVRGGIKAIPVGQTEAARSLGLSYTKTMQQIIL 133 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ A ++F+ LK T++ S I + E+ Q + IV+ Q ++Y +A +YLI Sbjct: 134 PQAFKVMAPSFINQFVISLKDTTILSAIGLVELLQAGKIIVARNLQSTMVYFVIAIMYLI 193 Query: 202 L 202 L Sbjct: 194 L 194 >gi|325978626|ref|YP_004288342.1| amino acid ABC transporter amino acid-binding/permease [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178554|emb|CBZ48598.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 745 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 127/216 (58%), Gaps = 9/216 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + L+ +++ QLL + + TL + ISF I+++IG ++ + + ++ I +V I Sbjct: 528 WGLLKNNYSQLL-SGLGKTLSLTLISFAIAMVIGIIFGMMAVA-PNKVLRTISAVFVDIV 585 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RG PL++ IF+G+P++ + FVA I+L+LN AYI+EI+R I ++P Sbjct: 586 RGIPLMIVAAFIFWGIPNLLESITGKQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVP 645 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +AS ++G++ +T++ IILPQ + ++F+ LK T++ S I + E+FQT Sbjct: 646 QGQMEASRSLGISYSKTMQKIILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTG 705 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + I++ YQ +Y LA +YL++ + + ++E Sbjct: 706 KIIIARNYQSFRMYAILAVIYLVMITLLTRLAKRLE 741 >gi|319780313|ref|YP_004139789.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166201|gb|ADV09739.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 215 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 119/211 (56%), Gaps = 14/211 (6%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 LL A V L +A +F+ I+G + RI + + Y+ +F+GTPLL+QLF Sbjct: 14 LLAARWTVLLSLA--AFIGGGIVGMIVLFFRIA-KNKWSRRVASGYIALFQGTPLLMQLF 70 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 ++F+GLP +G+ + + A + LT SAY++EI RS + ++P GQWDA ++GL Q Sbjct: 71 LMFFGLPMLGLRIEPWTAAALGLTFFASAYLAEIWRSGVAALPLGQWDAGASLGLHYLQE 130 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R IILPQ + + P + ++KST++ S I E+ +T+ I + T++P +Y + Sbjct: 131 LRLIILPQAFSITRAPTVGFLVQLIKSTALTSIIGFEELVRTSNAINNATFEPFKVYGLV 190 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 A ++ ++ C+ +TQ+ ++K Sbjct: 191 ALIFFVM---CF--------PLTQYARRLEK 210 >gi|228983843|ref|ZP_04144038.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775892|gb|EEM24263.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 214 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 105/163 (64%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + + S I+ F V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGIVR-YTKIPVFSQILGFIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP +G+ + A+I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEVGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +IILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WYIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQ 176 >gi|330830267|ref|YP_004393219.1| amino acid ABC transporter permease [Aeromonas veronii B565] gi|328805403|gb|AEB50602.1| Amino acid ABC transporter, permease protein [Aeromonas veronii B565] Length = 319 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 63/197 (31%), Positives = 123/197 (62%), Gaps = 6/197 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ ++ ++ + ++++G + R+ + + +L + YV + RGTPLLVQ+F++++ Sbjct: 120 GVWVTVKLSLVAGIFAILLGTLAGLARLSPNPALRNLAIT-YVELIRGTPLLVQIFIVYF 178 Query: 80 GLPHIGIVF--DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 IG V D F A + +L + AY++EI+R+ I SI KGQ +A ++G+T QT+R Sbjct: 179 ---FIGTVLNLDRFTAGVAALAVFTGAYVAEIVRAGISSIHKGQMEAGRSLGMTSAQTMR 235 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 ++ILPQ PL+ +FI+++K +S+ S I+I ++ + + +VS+T+ P ++ +A Sbjct: 236 YVILPQAFKRVLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSSTFSPFEVWFTVAL 295 Query: 198 VYLILTSFCYIIQIKIE 214 +YL+LT + ++E Sbjct: 296 LYLVLTGTLSFLVRRLE 312 >gi|302337059|ref|YP_003802265.1| polar amino acid ABC transporter inner membrane protein [Spirochaeta smaragdinae DSM 11293] gi|301634244|gb|ADK79671.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 225 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 120/202 (59%), Gaps = 2/202 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L A ++TL I + + L++G IA + + + + Y+++ RGTPLL+QLF Sbjct: 18 LFRDAALLTLEITTLGILTGLVLGL-IAALGTISRNKVAHGVSSAYIFLIRGTPLLLQLF 76 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +I+YGL + + F + II+L ++ AYI+EI R SI SI GQ +A+ ++G+ R++ Sbjct: 77 IIYYGLTTV-VTIPPFPSAIIALGVHNGAYIAEIFRGSIQSIHYGQMEAARSLGMPRRKA 135 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R IILPQ + L ++FI LK +S+ASTI +PE+ +++ S+T+ + + + Sbjct: 136 MRRIILPQAFKRAVPSLGNQFIIALKDSSLASTIAVPELLLKGRQLGSSTFMYMEMLIIV 195 Query: 196 AFVYLILTSFCYIIQIKIESSV 217 A YLI+TS I ++E + Sbjct: 196 AIWYLIMTSVLTIGVHRLEKRL 217 >gi|325277399|ref|ZP_08143019.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] gi|324097472|gb|EGB95698.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] Length = 215 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 60/185 (32%), Positives = 113/185 (61%), Gaps = 6/185 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 TL ++ ++F+ + G + + R+ SD ++ Y+ +F+GTPLL+QLF++F+G+ Sbjct: 19 TLLLSLVAFICGGVAGLLVLLARL--SDNFVLRGAAKGYIELFQGTPLLMQLFMVFFGIA 76 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 G+ +++A I+LTL SA+++E R + +IP+GQW+AS ++ +TR + +R++ILP Sbjct: 77 LFGVDISAWMAAAIALTLFTSAFLAETWRGCVEAIPRGQWEASGSLAMTRLEQMRYVILP 136 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + + P + ++K T+V S I E+ +T + + T++P +IY +A Y +L Sbjct: 137 QALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGGMLANATFEPFLIYGLVAVGYFML 196 Query: 203 TSFCY 207 CY Sbjct: 197 ---CY 198 >gi|307326880|ref|ZP_07606071.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] gi|306887416|gb|EFN18411.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] Length = 302 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 82/247 (33%), Positives = 135/247 (54%), Gaps = 26/247 (10%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++EW + F + I V++ + ++ ISL G +A++R+ S ++S + + Sbjct: 49 RFEWNTVAKYFFEIRVLKGIGVSIGMTAVTMAISLASGTLVALMRMGDSR-LMSTVAAAF 107 Query: 62 VWIFRGTPLLVQLFVIFYGLP------HIGI-------VFDS------FVAIIISLTLNF 102 +W+FR P+LVQL +Y L +GI FDS A II LTL+ Sbjct: 108 IWVFRSIPMLVQLL-FWYNLAALFPTLSLGIPWGPRFVTFDSNDVIGPLTAAIIGLTLHE 166 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AYI+E+IRS ++++P GQ A+ A+GLT Q I LPQ + P+ +E IS+LK+ Sbjct: 167 TAYIAELIRSGLLAVPDGQHQAASALGLTPAQIFFRITLPQALRVIVPPMGNELISLLKA 226 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TS+ S IT+ ++ + Q I + +Q PL+I A Y+I+T ++Q ++E + +H Sbjct: 227 TSLVSVITLADLLYSVQLIYAKNFQTVPLLIVA--AIWYMIITGVITLLQQRLERRLGRH 284 Query: 221 TY-SVDK 226 T S DK Sbjct: 285 TLISADK 291 >gi|302528609|ref|ZP_07280951.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. AA4] gi|302437504|gb|EFL09320.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. AA4] Length = 298 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 128/230 (55%), Gaps = 27/230 (11%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A + T+ + ++ I +++G +AV+R+ ++ + Y+W FRGTP+ VQL +F Sbjct: 62 AGLGKTIELTVLAMAIGIVLGVVLAVMRLS-ANPAMKGFASLYIWFFRGTPVFVQL--LF 118 Query: 79 YGL-----PHIGI---------------VFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 +G P +GI + F+A I+ L LN AY++E++R+ I+S+ Sbjct: 119 WGYASALYPRLGIGIPFGPQFVSAPTNVLITPFIAAILGLGLNEGAYMAEVVRAGILSVD 178 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+ A+G++R +T+R ++LPQ + P ++ I++LK+TS+ S + PE+ +A Sbjct: 179 RGQTEAAQALGMSRLRTLRRVVLPQAMRVIIPPTGNQVITMLKTTSLVSVLAFPELLYSA 238 Query: 179 QRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 Q + ST ++ PL+I L YL+ TS + Q +E ++ V + Sbjct: 239 QLVYSTNFKTIPLLITASL--WYLLTTSVLNVGQHFLERRFSRSERGVSR 286 >gi|207109891|ref|ZP_03244053.1| amino acid ABC transporter, permease protein [Helicobacter pylori HPKX_438_CA4C1] Length = 146 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 62/145 (42%), Positives = 95/145 (65%), Gaps = 6/145 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-----FFSDTIIS 55 M E L++++F +L AA ++LP+A ISF++ L I F+A+I+I F +++ Sbjct: 1 MSKERLELLLEAFYPMLKAAFCISLPLAIISFILGLFIAVFVALIKIAPPKHFIHKALLA 60 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + +FYV + RGTPLLVQ+ V+FYGLP +G+ D A II+ + N AY SE +R+S + Sbjct: 61 GV-NFYVSLIRGTPLLVQIVVVFYGLPALGVYIDPIPAGIIAFSFNVGAYASETLRASFL 119 Query: 116 SIPKGQWDASYAIGLTRKQTIRHII 140 S+PK QWD+S ++GL QT H+I Sbjct: 120 SVPKDQWDSSLSLGLNYLQTFWHVI 144 >gi|91778420|ref|YP_553628.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|296159867|ref|ZP_06842688.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|91691080|gb|ABE34278.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia xenovorans LB400] gi|295889850|gb|EFG69647.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 218 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 117/201 (58%), Gaps = 7/201 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ I+FV I+G + +R+ + I+ YV +F+GTPLL+QLF+ F+GLP Sbjct: 20 TVLLSLIAFVGGGIVGLILLAMRVS-PIAWLRRIVVVYVEVFQGTPLLMQLFLAFFGLPL 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ +VA ++LTL SAY+ +I R + ++P+GQW A ++G+T Q +R+I+ PQ Sbjct: 79 LGVDVSPWVAATVTLTLYTSAYLVDIWRGCVEAVPRGQWAAGASLGMTFGQQLRYIVWPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI-- 201 + + P + ++KST++AS I E+ +T I + ++P IY +A +Y Sbjct: 139 ALKIAVAPTVGFLVQVVKSTALASIIGFTELTKTGTMITNAAFRPFPIYGMVAMIYFAMC 198 Query: 202 --LTSFCYIIQIKIESSVTQH 220 LT + +++ + V QH Sbjct: 199 FPLTWYARVLEKR--QKVGQH 217 >gi|307319175|ref|ZP_07598605.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306895282|gb|EFN26038.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] Length = 222 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 119/202 (58%), Gaps = 3/202 (1%) Query: 3 YEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 YE+ F ++ SF QLL A + T+ ++C + +I L++ F A + I+ ++ Y Sbjct: 2 YEFNFAPVLASFDQLLVGAWL-TVRLSCAAMLIGLVVSVFCAWGKTA-GPAILRAVIDGY 59 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + I R TP LVQ+F IF+G+P +G+ A +++L +NF AY +EIIR+ I SI KGQ Sbjct: 60 IEIIRNTPFLVQIFFIFFGMPSLGLRLSPNSAALLALVVNFGAYGTEIIRAGIESIHKGQ 119 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A +A+GL+R Q R++++ + T L+S+FI ++ +TSV S I+ ++ + Sbjct: 120 VEAGWALGLSRPQIFRYVVMKPALRTVYPALTSQFIYLMLNTSVVSVISADDLAAAGNDL 179 Query: 182 VSTTYQPLIIYCELAFVYLILT 203 S T+ +Y + +YL L+ Sbjct: 180 QSATFASFEVYIAVTLIYLALS 201 >gi|306825587|ref|ZP_07458926.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431948|gb|EFM34925.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 227 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 73/227 (32%), Positives = 121/227 (53%), Gaps = 19/227 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLP---IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 F+ + P Y A++ L + C+ +I +++ F R F + + YV Sbjct: 3 FSFLPKYLPYFNYGALITVLISIFVVCLGTIIGVLLAF---AQRSRFKPLV--WFANVYV 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 WIFRGTP++VQ+ + F L HI G+ + I+ +++N AY+SE +R+ Sbjct: 58 WIFRGTPMMVQIMIAF-ALMHINAPTIQVGILGVDLSRLIPGILIISMNSGAYVSETVRA 116 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++PKGQ +A+Y++G+ K +R++ILPQ I L +EFI+I+K +S+ S I + Sbjct: 117 GINAVPKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVM 176 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 E++ A + +TTY PL AF YLI+TS + E + Q Sbjct: 177 ELWNGATTVATTTYLPLTPLLFAAFYYLIMTSVLTVALKAFEKHIGQ 223 >gi|271500710|ref|YP_003333735.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270344265|gb|ACZ77030.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 214 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 61/165 (36%), Positives = 101/165 (61%), Gaps = 1/165 (0%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI 94 S ++G AV+R L + Y+ +FRGTP+L+ L I++G+ + G + F A Sbjct: 30 STLLGLLAAVLRTSRLPIARQLAL-LYIELFRGTPVLITLMFIYFGVAYFGYDINLFAAG 88 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 I+ L++ AYI+E+ R+ I ++PKGQW+ S+ +GL+++QT +ILPQT PL+ Sbjct: 89 ILGLSIYQGAYIAEVFRAGIEAVPKGQWEVSWILGLSKRQTFLSVILPQTRGIVLPPLTG 148 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +++S++K TS+ S I + E+ Q IV QP+IIY +A +Y Sbjct: 149 QYLSLIKDTSIVSMIGMSELMHQGQAIVDRIGQPVIIYGLVALLY 193 >gi|225862620|ref|YP_002747998.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB102] gi|225789877|gb|ACO30094.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB102] Length = 214 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 63/163 (38%), Positives = 104/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + ++S ++ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILR-YMKIPVVSQVLGIIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A+I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK T++A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTALAVVISLPELMHNAQ 176 >gi|75765094|ref|ZP_00744383.1| Glutamine transport system permease protein glnP [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218895696|ref|YP_002444107.1| amino acid ABC transporter, permease protein [Bacillus cereus G9842] gi|228899327|ref|ZP_04063590.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis IBL 4222] gi|74487418|gb|EAO51345.1| Glutamine transport system permease protein glnP [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218541097|gb|ACK93491.1| amino acid ABC transporter, permease protein [Bacillus cereus G9842] gi|228860358|gb|EEN04755.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis IBL 4222] Length = 214 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 63/163 (38%), Positives = 104/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + ++S ++ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILR-YMKIPVVSQVLGIIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A+I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK T++A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTALAVVISLPELMHNAQ 176 >gi|212640609|ref|YP_002317129.1| glutamine ABC transporter permease [Anoxybacillus flavithermus WK1] gi|212562089|gb|ACJ35144.1| ABC-type glutamine transport system, permease component [Anoxybacillus flavithermus WK1] Length = 218 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 118/199 (59%), Gaps = 3/199 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN+I++ P L ++ T+ ++ I + I+G I + ++ + ++ L +YV F Sbjct: 6 FNIIVEYAPFFL-KGVLWTIGLSLIGILFGTILGLAIGLGKMV-QNRLVRLPFDWYVHFF 63 Query: 66 RGTPLLVQLFVIFYG-LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL VQ+ +I +G +P + V+ ISL+LN +AYI+EI R+ I SI +GQ +A Sbjct: 64 RGTPLFVQILLIHFGVMPMFTAQPNPLVSGAISLSLNAAAYIAEIFRAGIQSIDRGQMEA 123 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G+T Q +R+IILPQ I PL +EF+ ++K +S+A+ I PE+ + + Sbjct: 124 ARSLGMTHVQAMRYIILPQAIKRMIPPLGNEFVVLIKDSSLAAIIAAPELMYWGRAMQGQ 183 Query: 185 TYQPLIIYCELAFVYLILT 203 Y+ Y +A +YL+LT Sbjct: 184 YYRVWEPYLTVALIYLVLT 202 >gi|256830136|ref|YP_003158864.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] gi|256579312|gb|ACU90448.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] Length = 226 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 60/152 (39%), Positives = 94/152 (61%), Gaps = 1/152 (0%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ + YV + RGTP+LVQ ++YG+P +G+ +A +I + +N AYI+EI+R Sbjct: 52 LVRKLADLYVELVRGTPMLVQAMFLYYGVPMAVGLRIPPLIAGVIVIAINSGAYIAEIVR 111 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 +I SI GQ +A +IGLTR QT+R+II PQ PL ++FI LK TS+ I + Sbjct: 112 GAIQSINVGQTEAGRSIGLTRAQTMRYIIWPQAFKRMIPPLGNQFIISLKDTSLLMVIGV 171 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+ +T Q IV+ ++ +Y +A VYL++T Sbjct: 172 GELLRTGQEIVAVNFRAFEVYMAVAMVYLVMT 203 >gi|117620284|ref|YP_857306.1| amino acid ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561691|gb|ABK38639.1| amino acid ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 326 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 63/197 (31%), Positives = 123/197 (62%), Gaps = 6/197 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ ++ ++ + ++++G + R+ + + +L + YV + RGTPLLVQ+F++++ Sbjct: 127 GVWVTVKLSLVAGIFAILLGTLAGLARLSPNPALRNLAVT-YVELIRGTPLLVQIFIVYF 185 Query: 80 GLPHIGIVF--DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 IG V D F A + +L + AY++EI+R+ I SI KGQ +A ++G+T QT+R Sbjct: 186 ---FIGTVLNLDRFTAGVAALAVFTGAYVAEIVRAGISSIHKGQMEAGRSLGMTSAQTMR 242 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 ++ILPQ PL+ +FI+++K +S+ S I+I ++ + + +VS+T+ P ++ +A Sbjct: 243 YVILPQAFKRVLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSSTFSPFEVWFTVAL 302 Query: 198 VYLILTSFCYIIQIKIE 214 +YL+LT + ++E Sbjct: 303 LYLVLTGTLSFLVRRLE 319 >gi|153010784|ref|YP_001371998.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD [Ochrobactrum anthropi ATCC 49188] gi|151562672|gb|ABS16169.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuD [Ochrobactrum anthropi ATCC 49188] Length = 230 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 71/201 (35%), Positives = 113/201 (56%), Gaps = 1/201 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VTL A F I+L++G A++R IIS V R TPLLVQLF ++Y Sbjct: 26 GLTVTLKAAATGFAIALVLGLVFALLR-RSPYKIISWPTVVVVEFLRDTPLLVQLFFLYY 84 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 LP GIV +F+ ++L L +SAY SE+ R I +IP+GQW+A+ A+ LT +T R I Sbjct: 85 VLPAYGIVLPAFLTGALALGLQYSAYTSEVYRGGIEAIPRGQWEAARALNLTPWRTYRDI 144 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ++PQ I + + +S+LK T V S ++I ++ A I T++ L+ + ++ Sbjct: 145 VIPQAIPRIIPAMGNYLVSMLKETPVLSVVSIVDMLNLANLIGDRTFEYLVPLSMVGLIF 204 Query: 200 LILTSFCYIIQIKIESSVTQH 220 LILT C + +E ++ ++ Sbjct: 205 LILTLICSALIRLLERTLPKN 225 >gi|186470875|ref|YP_001862193.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184197184|gb|ACC75147.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 221 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 65/184 (35%), Positives = 114/184 (61%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A++VTL ++ I+ V+ + GF + +R+ ++ +++ +VW+ RG P L QL ++++ Sbjct: 14 AMLVTLEVSLIAAVLGMGGGFALNGLRLRYAR-VLAAPYRVFVWLIRGMPYLSQLMIVYF 72 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP GI + A ++SL + SAY +EI R++ S+P+GQ +A+ A G++R R I Sbjct: 73 GLPAFGITMTAVQATVVSLAIYASAYFAEIFRAAWASVPRGQIEAAQAFGVSRWAAFRAI 132 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 LPQ + + L+++ I ++K ++VAS IT+PE+ TA IV++TY + Y L Y Sbjct: 133 ELPQALAFAVPLLANQIILVIKESAVASVITVPELTMTASDIVASTYTYVGPYTLLIVSY 192 Query: 200 LILT 203 +LT Sbjct: 193 WLLT 196 >gi|76788643|ref|YP_328867.1| His/Glu/Gln/Arg/opine amino acid ABC transporter amino acid-binding protein/permease [Streptococcus agalactiae A909] gi|76563700|gb|ABA46284.1| amino acid ABC transporter, amino acid-binding/permease protein, His/Glu/Gln/Arg/opine family [Streptococcus agalactiae A909] Length = 516 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 114/211 (54%), Gaps = 10/211 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF-FSDT--------I 53 +E I+ + TL I+ + ++ L IG I V R SD + Sbjct: 278 FEQMATILKNNGSQFLRGTATTLLISMVGTIVGLFIGLLIGVFRTAPKSDNKLKAALQKL 337 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRS 112 + +++ Y+ +FRGTP++VQ VI+YG G+ D +A I +++N AY+SEI+R Sbjct: 338 LGWLLNIYIEVFRGTPMIVQSMVIYYGTAQAFGVSLDRTLAAIFIVSINTGAYMSEIVRG 397 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I S+ KGQ++A+ A+G T QT+R I+LPQ + +EF+ +K TSV + I++ Sbjct: 398 GIFSVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVV 457 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E++ + + + TYQ + +A +Y ILT Sbjct: 458 ELYFSGNTVATQTYQYFQTFTIIAIIYFILT 488 >gi|56421989|ref|YP_149307.1| amino acid ABC transporter permease [Geobacillus kaustophilus HTA426] gi|56381831|dbj|BAD77739.1| amino acid ABC transporter (permease) [Geobacillus kaustophilus HTA426] Length = 218 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 66/195 (33%), Positives = 117/195 (60%), Gaps = 3/195 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I++ P + ++VT+ ++ V LI+G FI + ++ S+ II L +Y+ F Sbjct: 5 FDIIVEYAP-YFWQGLLVTIGVSLAGIVFGLILGLFIGLGKMS-SNPIIRLPFSWYINFF 62 Query: 66 RGTPLLVQLFVIFYG-LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL+VQ+ ++ +G +P ++ ++ +SL+LN +AY++EI R+ I SI KGQ +A Sbjct: 63 RGTPLVVQILLVHFGAMPLFFAQPNAVASLAVSLSLNSAAYVAEIFRAGIQSIDKGQMEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G+T Q +R+IILPQ + P ++EFI ++K +S+ I PEI + Sbjct: 123 ARSLGMTHAQAMRYIILPQALKRMIPPFANEFIVLIKDSSLGMVIAAPEIMYWGKAAAGE 182 Query: 185 TYQPLIIYCELAFVY 199 Y+ Y +AF+Y Sbjct: 183 YYRVWEPYLTVAFIY 197 >gi|296111776|ref|YP_003622158.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii IMSNU 11154] gi|295833308|gb|ADG41189.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii IMSNU 11154] Length = 213 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 124/214 (57%), Gaps = 7/214 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFI--AVIRIFFSDTIISLIMHFYVWI 64 N ++ P LL A + +TL + ++ + S+ +G + + +F+ + +++ Y+WI Sbjct: 2 NYFLEIAPNLL-AGLKMTLGVFFLTIIGSVPLGIIVSLGMKSEYFT---VRWLINGYIWI 57 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLL+QL ++YGL +GI F F A +I+ +N++AY++EI R + S+P+GQ+DA Sbjct: 58 MRGTPLLLQLIFVYYGLGMMGITFPRFEAAVIAFIINYAAYLAEIFRGGLQSVPRGQYDA 117 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + +G TR QT I+LPQ I +E I+++K TS+ I + +I + A I ++ Sbjct: 118 ARVLGFTRTQTFFKIVLPQVIKIVVPSFGNEVINLVKDTSLVYVIGLGDILR-AGNIAAS 176 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 L+ Y + +YL++T+ ++ + E + Sbjct: 177 RDVTLVPYLLVGLIYLLMTAIVTVLLRRSEKRLN 210 >gi|253576692|ref|ZP_04854019.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251843902|gb|EES71923.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 220 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 67/186 (36%), Positives = 111/186 (59%), Gaps = 2/186 (1%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A + TL +A IS + +G IA++R+ I+ + H +V RGTP++VQL +I Sbjct: 16 AGVQYTLLLAAISVICGFFLGLLIALLRMS-PWGILRFLGHVWVEFLRGTPMMVQLLIIH 74 Query: 79 YGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 YG + I F + I+L++N SAY++EI R+ I + +GQ +A+ ++G+T+ +R Sbjct: 75 YGFAFMFDINFTPIQSGAITLSINSSAYLAEIFRAGIQGVDRGQGEAARSLGMTKGMAMR 134 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 HII+PQ I + + +EFI+I+K +S+ S I E+ AQ +V+ TY + Y +A Sbjct: 135 HIIIPQAIKSVLPAIGNEFITIIKESSIVSIIGTAELIYQAQSVVTITYDGMTPYLIIAI 194 Query: 198 VYLILT 203 +Y ILT Sbjct: 195 MYFILT 200 >gi|17548701|ref|NP_522041.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum GMI1000] gi|17430949|emb|CAD17631.1| probable amino acid transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 262 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 106/189 (56%), Gaps = 9/189 (4%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMH---FYVWIFRGTPLLVQLFVIFYGLPH--IGIVFD 89 S + G + ++ + +SL+ FY+W+ RGTPLLVQ+ +F LP + D Sbjct: 68 SALAGVLLGIVAALGKLSPVSLLRQAASFYIWVIRGTPLLVQILFVFLALPAWLPWLQMD 127 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 F + ++L N AY +E IR+ ++++PKGQ +A++++GL+R T +I PQ + Sbjct: 128 DFTSACVALAFNAGAYNAESIRAGLLAVPKGQLEAAHSLGLSRWHTFADVIFPQAFKVAL 187 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL----ILTSF 205 PL + FIS+LK +S+A I + E+ R+ + T+QPL A +YL +LT F Sbjct: 188 PPLVNNFISLLKDSSLAYAIGVVELTNVGNRLQAATFQPLPALVTTAVIYLALTTVLTQF 247 Query: 206 CYIIQIKIE 214 ++ +++ Sbjct: 248 SNAVEQRMD 256 >gi|22536321|ref|NP_687172.1| amino acid ABC transporter amino acid-binding protein/permease [Streptococcus agalactiae 2603V/R] gi|25010207|ref|NP_734602.1| hypothetical protein gbs0132 [Streptococcus agalactiae NEM316] gi|76798972|ref|ZP_00781172.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus agalactiae 18RS21] gi|77409056|ref|ZP_00785774.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus agalactiae COH1] gi|77411816|ref|ZP_00788151.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus agalactiae CJB111] gi|77414941|ref|ZP_00791039.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus agalactiae 515] gi|22533144|gb|AAM99044.1|AE014197_12 amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus agalactiae 2603V/R] gi|23094559|emb|CAD45777.1| Unknown [Streptococcus agalactiae NEM316] gi|76585667|gb|EAO62225.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus agalactiae 18RS21] gi|77159009|gb|EAO70222.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus agalactiae 515] gi|77162151|gb|EAO73127.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus agalactiae CJB111] gi|77172350|gb|EAO75501.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus agalactiae COH1] gi|319744066|gb|EFV96443.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus agalactiae ATCC 13813] Length = 516 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 114/211 (54%), Gaps = 10/211 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF-FSDT--------I 53 +E I+ + TL I+ + ++ L IG I V R SD + Sbjct: 278 FEQMATILKNNGSQFLRGTATTLLISMVGTIVGLFIGLLIGVFRTAPKSDNKLKAALQKL 337 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRS 112 + +++ Y+ +FRGTP++VQ VI+YG G+ D +A I +++N AY+SEI+R Sbjct: 338 LGWLLNIYIEVFRGTPMIVQSMVIYYGTAQAFGVSLDRTLAAIFIVSINTGAYMSEIVRG 397 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I S+ KGQ++A+ A+G T QT+R I+LPQ + +EF+ +K TSV + I++ Sbjct: 398 GIFSVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVV 457 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E++ + + + TYQ + +A +Y ILT Sbjct: 458 ELYFSGNTVATQTYQYFQTFTIIAIIYFILT 488 >gi|225870042|ref|YP_002745989.1| amino acid ABC transporter permease protein [Streptococcus equi subsp. equi 4047] gi|225699446|emb|CAW92946.1| putative amino acid ABC transporter permease protein [Streptococcus equi subsp. equi 4047] Length = 227 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 120/212 (56%), Gaps = 12/212 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 Y +V + AC+ F IIG + +I+ + S ++ YVWIFRGTP++VQ+ + Sbjct: 15 YGVLVTMMISACVVF-FGTIIGLLVTLIKRSHIKPL-SWLVSLYVWIFRGTPMVVQIMIA 72 Query: 78 F-----YGLPHIG-----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 F LP +G + F + II ++LN AYISEI+R+ I ++PKGQ +A+Y+ Sbjct: 73 FAWLHFNDLPIVGFGVLDLDFSRLLPGIIIISLNSGAYISEIVRAGIEAVPKGQLEAAYS 132 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ K +R++ILPQ L +E I+I+K +++ TI + E++ AQ +V+ TY Sbjct: 133 LGIRPKNAMRYVILPQAFKNILPALGNELITIIKDSALLQTIGVMELWNGAQSVVTATYL 192 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 P+ AF YL++T+ + +E + Q Sbjct: 193 PITPLLFAAFYYLMITTILSQLLGCLERKLAQ 224 >gi|170696519|ref|ZP_02887643.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170138566|gb|EDT06770.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 218 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 117/201 (58%), Gaps = 7/201 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ I+FV + G + +R+ + I+ YV +F+GTPLL+QLF+ F+GLP Sbjct: 20 TVLLSLIAFVGGGVFGLILLAMRVS-PIAWLRRIVVLYVEVFQGTPLLMQLFLAFFGLPL 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ +VA ++LTL SAY+ +I R + ++P+GQW A ++G+T Q +R+I+ PQ Sbjct: 79 VGVDVSPWVAATVTLTLYTSAYLVDIWRGCVEAVPRGQWAAGASLGMTFAQQLRYIVWPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI-- 201 + + P + ++KST++AS I E+ +T I + ++P IY +A +Y Sbjct: 139 ALKIAVAPTVGFLVQVVKSTALASIIGFTELTKTGTMITNAAFRPFPIYGMVAMIYFAMC 198 Query: 202 --LTSFCYIIQIKIESSVTQH 220 LT + +++ + + V QH Sbjct: 199 FPLTWYARVLEKR--NKVGQH 217 >gi|319763454|ref|YP_004127391.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC] gi|330824299|ref|YP_004387602.1| polar amino acid ABC transporter inner membrane subunit [Alicycliphilus denitrificans K601] gi|317118015|gb|ADV00504.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans BC] gi|329309671|gb|AEB84086.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans K601] Length = 222 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 127/200 (63%), Gaps = 1/200 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 QLL A VVT+ + S ++ ++G + + R+ + I+ + YV RGTPLLVQL Sbjct: 14 QLLQGA-VVTVQVTAASLLLGCVMGLLVGIGRLNPRNRIVYGLCTAYVAAIRGTPLLVQL 72 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F++F+GLP +G++ +FV +I L + AY+SEI+R +I SI KGQ +A+ +IGL+ Q Sbjct: 73 FLLFFGLPQLGVLLPAFVCGVIGLGIYSGAYVSEIVRGAIQSIDKGQMEAARSIGLSSGQ 132 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 +R ++LPQ + PL +EFI+++K++++ S +TI ++ Q+I+S +Y+ L +Y Sbjct: 133 AMRSVVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLEVYLA 192 Query: 195 LAFVYLILTSFCYIIQIKIE 214 +A VY +LT ++ +E Sbjct: 193 IAVVYFVLTGATTLVLRHME 212 >gi|218235175|ref|YP_002365195.1| putative amino acid ABC transporter, permease protein [Bacillus cereus B4264] gi|218163132|gb|ACK63124.1| putative amino acid ABC transporter, permease protein [Bacillus cereus B4264] Length = 230 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 125/218 (57%), Gaps = 7/218 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + I S+P LL A IV TL + S V+ +IG A RI ++ ++ I H Y+ I Sbjct: 2 FEIFISSYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-NNKFLNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGN 178 Query: 186 YQPLIIYCELAFVYLIL----TSFCYIIQIKIESSVTQ 219 +Q L Y + YL+L T F +++ +++ T Sbjct: 179 FQQLDTYIIVGAYYLVLVLLFTYFVNLLENRLQRKETN 216 >gi|113866077|ref|YP_724566.1| ABC transporter permease [Ralstonia eutropha H16] gi|113524853|emb|CAJ91198.1| ABC-type transporter, permease component: PAAT family [Ralstonia eutropha H16] Length = 222 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 74/193 (38%), Positives = 122/193 (63%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 V+T+ + + V+ ++G + + R+ +I I YV RGTPLLVQLF++F+GL Sbjct: 20 VITVEVTACALVLGCVMGLLVGIGRLDPKRRVIYSICTAYVTFIRGTPLLVQLFLLFFGL 79 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 P I+ +FV +I L + AY+SEI+R +I S+ KGQ +A+ +IG++ Q +R +IL Sbjct: 80 PQFNILLPAFVCGVIGLGIYSGAYVSEIVRGAIQSVDKGQMEAARSIGMSSGQAMRAVIL 139 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ I PL +EFI+++K++++ S +TI ++ Q+I+S +Y+ L +Y +A VYLI Sbjct: 140 PQAIVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISVSYRSLEVYLAIALVYLI 199 Query: 202 LTSFCYIIQIKIE 214 LTS +I + E Sbjct: 200 LTSAAGLILRRAE 212 >gi|261409440|ref|YP_003245681.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Paenibacillus sp. Y412MC10] gi|329922585|ref|ZP_08278160.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Paenibacillus sp. HGF5] gi|261285903|gb|ACX67874.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Paenibacillus sp. Y412MC10] gi|328942129|gb|EGG38411.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Paenibacillus sp. HGF5] Length = 220 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 76/218 (34%), Positives = 126/218 (57%), Gaps = 6/218 (2%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFY 61 ++W + + PQLL +A+ +T+ + +FV++LIIG +A R F +SLI Sbjct: 2 WDW-KYVFEILPQLL-SALKMTVWVTLCAFVVALIIGLLLAFAARSKFKP--LSLITKGI 57 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + R TPLLVQ+F ++Y LP + GI +F A +I L L++S Y+SE+ RS I +PKG Sbjct: 58 IEFIRNTPLLVQVFFLYYSLPLLTGISIPAFYAGVIGLGLHYSTYLSEVYRSGIEGVPKG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A+ T+ QT R IILPQ + L + I + K T + IT+ E+ TA+ Sbjct: 118 QWEAATALNYTKSQTWRSIILPQAVPPIIPVLGNYLIVMFKETPILCAITLVEMMLTAKN 177 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 IVS +++ Y + ++LI++ ++ ++E + Sbjct: 178 IVSQSFRAFEPYTLVGILFLIISYIASLLVQRLEKRLN 215 >gi|167568073|ref|ZP_02360989.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia oklahomensis EO147] gi|167574432|ref|ZP_02367306.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia oklahomensis C6786] Length = 220 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 65/184 (35%), Positives = 112/184 (60%), Gaps = 2/184 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D P LL AIV T+ I +FV+S ++G +A++R+ S+ +S V + RG Sbjct: 8 LLDFLPILLKGAIV-TVEITLCAFVLSSVLGLGLALMRVS-SNRALSHAAAAVVNVIRGL 65 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P++VQLF I++ LP +G+ +F A I L + +SAY +E R+ I +I +GQ +A+ +I Sbjct: 66 PIIVQLFYIYFVLPDLGVQLSAFQAGFIGLGIAYSAYQAENFRAGIEAIDRGQIEAAQSI 125 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+ +R ++LPQ + P + + +LK +S+ASTIT+ E+ + Q I S+T+Q Sbjct: 126 GMRGAMIMRRVVLPQAFRIALPPYGNTLVMMLKDSSLASTITVAEMTRAGQLIASSTFQN 185 Query: 189 LIIY 192 + +Y Sbjct: 186 MTVY 189 >gi|311031016|ref|ZP_07709106.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus sp. m3-13] Length = 222 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 118/203 (58%), Gaps = 2/203 (0%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A + VTL + ++ ++ IIG +A+ +I ++ ++ Y IFRGTPL++QL +IF Sbjct: 20 AGVKVTLQVVSLAGILGFIIGTLLALCKIG-RVKLLRILADIYTSIFRGTPLVLQLMLIF 78 Query: 79 YGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 +GLP IGI + A I++ LN AYISE+IR+ I+++ KGQ +A+ A+G+ +Q ++ Sbjct: 79 FGLPQAIGITLEPVTAAILAFGLNSGAYISEVIRAGIMAVDKGQREAAMALGVPYRQMMK 138 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 IILPQ + L +E+I++ K +++ + I + ++ + + S TY L + Sbjct: 139 DIILPQALKNILPALMNEYITLTKESAIVTVIGVMDVMRRSFMTASNTYAYLEAFIFAGL 198 Query: 198 VYLILTSFCYIIQIKIESSVTQH 220 +Y +L +I IE + ++ Sbjct: 199 IYYVLVMILTLIGKLIERRMRRY 221 >gi|306832761|ref|ZP_07465897.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] gi|304425110|gb|EFM28240.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] Length = 523 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 116/203 (57%), Gaps = 11/203 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF--FSDTIISLIMHFYVWI---- 64 +++ Q L A VTL I+ I V+ L IG I V R ++ +++ + + W+ Sbjct: 290 NNWNQFLRGA-GVTLFISIIGTVVGLFIGLLIGVYRTAPKAANKVLAGLQKAFGWVLNVY 348 Query: 65 ---FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 FRGTP++VQ VI+YG GI D +A ++ +++N AY+SEI+R I ++ KG Sbjct: 349 IEVFRGTPMIVQAMVIYYGTAQAFGISIDRTLAAVLIVSINTGAYMSEIVRGGIFAVDKG 408 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ A+G T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 409 QFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNT 468 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + + TYQ + +A +Y ILT Sbjct: 469 VATQTYQYFQTFTIIAIIYFILT 491 >gi|94987161|ref|YP_595094.1| ABC-type amino acid transport system, permease component [Lawsonia intracellularis PHE/MN1-00] gi|94731410|emb|CAJ54773.1| ABC-type amino acid transport system, permease component [Lawsonia intracellularis PHE/MN1-00] Length = 228 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 119/207 (57%), Gaps = 5/207 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ + + L +I + +P A I F++ + IG +IR+F + + + + IFRG Sbjct: 12 VVPTLNKGLLVSIALIIPSAIIGFLLGVCIG----IIRVF-GKRWLQRLGNIFTLIFRGV 66 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PL VQL ++++GLP+I I F+ ++A +I TL AY SE IR +++SI KGQ A+YA+ Sbjct: 67 PLTVQLMILYFGLPNINIYFEPYIAAVIGFTLCTGAYQSEYIRGALLSIKKGQLQAAYAL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G TR + I II+PQ + +E + ++K +S+A IT E+ A+ +VS T +P Sbjct: 127 GFTRLKAILFIIIPQATRYALPGCGNELVYLIKYSSLAYLITCIELTGEAKILVSQTVKP 186 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIES 215 + IY A YL S I K+E+ Sbjct: 187 MEIYFIAAIYYLSFVSIATWILKKLET 213 >gi|322389670|ref|ZP_08063218.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 903] gi|321143669|gb|EFX39099.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 903] Length = 727 Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 70/219 (31%), Positives = 123/219 (56%), Gaps = 9/219 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + L+ +++ QLL + + VTL +A +SF I+++IG + + + +V + Sbjct: 510 WGLLQNNYKQLL-SGLGVTLALALLSFAIAMVIGVIFGMFSVS-PYKWLRWTAEIFVDVI 567 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RG PL++ IF+G+P++ + FVA I+L+LN +AYI+EI+R I ++P Sbjct: 568 RGIPLMILAAFIFWGIPNLIESVTGHQSPINDFVAGTIALSLNAAAYIAEIVRGGIQAVP 627 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+FQT Sbjct: 628 IGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTG 687 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + I++ YQ +Y LA YL++ + K+E V Sbjct: 688 KIIIARNYQSFKMYAILAVFYLVIITLLTRFAKKLEKKV 726 >gi|291519683|emb|CBK74904.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Butyrivibrio fibrisolvens 16/4] Length = 501 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 121/222 (54%), Gaps = 15/222 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHFYV 62 N I DS + + TL IA + + +IIGF +A+IR+ T I + I Y+ Sbjct: 283 NFIDDSRWTYILKGLQNTLLIALCAVLAGMIIGFVVAIIRVTHDKTGGWGIANAICKLYL 342 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSF-----VAIIISLTLNFSAYISEIIRSSIISI 117 I RGTP+++QL +I+Y +VF + + II+ +N AY++EI+R I+SI Sbjct: 343 AIIRGTPIMIQLLIIYY------VVFAAVNVPKVLVAIIAFAINSGAYVAEIMRGGIMSI 396 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQ +A ++GLT KQT+ IILPQ I L +EFIS++K TS+ I + ++ + Sbjct: 397 DDGQMEAGRSLGLTYKQTMISIILPQAIKNVLPALGNEFISLIKETSICGYIGLMDLTRG 456 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 I S T++P + +A VYL + + K+E ++ + Sbjct: 457 GDIIRSITFEPFLPLIGVAIVYLFIVQLLNLAVGKLEKNLRK 498 >gi|55823261|ref|YP_141702.1| ABC transporter amino acid permease [Streptococcus thermophilus CNRZ1066] gi|55739246|gb|AAV62887.1| ABC transporter amino acid permease protein [Streptococcus thermophilus CNRZ1066] Length = 231 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 80/224 (35%), Positives = 126/224 (56%), Gaps = 14/224 (6%) Query: 1 MKYEW---FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI 57 M + W F L + L A I VT+ IA IS +++++IG FI +++ + ++ I Sbjct: 3 MNFSWEYFFELFVK-----LPAYIPVTIFIALISMILAILIGLFITWLQLS-KNKVLIFI 56 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI---IISLTLNFSAYISEIIRSSI 114 Y+ +FRG P LVQLF+IFYGLP + F A+ +I L L +AY+SEI R++I Sbjct: 57 SQVYISLFRGMPTLVQLFLIFYGLPQLFPAFKGMSALTAALIGLGLKEAAYLSEIFRAAI 116 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSE-FISILKSTSVASTITIPE 173 SI KGQ +A A+ + + H+ILPQ T +A+P + FIS+LK TS+A T+ I E Sbjct: 117 NSIDKGQIEAGEALNIPAWKVFLHVILPQA-TLNALPATGNTFISLLKETSLAFTLGITE 175 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +F A+ I +++ Y + +Y I+ +Q + E + Sbjct: 176 LFGNAKMIAGESFRYFETYLAVGLLYWIMIVVYTWVQKQFEKEL 219 >gi|329296884|ref|ZP_08254220.1| polar amino acid ABC transporter inner membrane subunit [Plautia stali symbiont] Length = 221 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 67/220 (30%), Positives = 127/220 (57%), Gaps = 2/220 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + II S P L ++ TL + ++ + SL+ G +AV+ + S + L ++ Y + Sbjct: 3 WQAIITSLPSL-GDGLLATLQLCLVAALCSLLWGALLAVLLMRASRFWLRL-LNLYRGLT 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 PLLV ++++++ LP I S V +++LTL ++ YI+++IRS+I ++PKGQW+A Sbjct: 61 LALPLLVVIYLLYFVLPEYDITLSSPVVGVLALTLYYAPYIAQVIRSAIDALPKGQWEAC 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GL+R + +R ++LPQT+ PL ++K +++ S +++ E A++ +S T Sbjct: 121 RVLGLSRSEQLRDVVLPQTLPQMLSPLVGLMTVLIKDSALLSIVSVQEFMYAAKQAISDT 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 Y PL IY +A Y +L S + +ES +T++ ++ Sbjct: 181 YAPLEIYLTVALCYWLLNSVIDWLARGLESRMTRYRRAMQ 220 >gi|312976992|ref|ZP_07788741.1| amino acid ABC transporter, amino acid-binding/permease protein, His/Glu/Gln/Arg/opine family [Lactobacillus crispatus CTV-05] gi|310896320|gb|EFQ45385.1| amino acid ABC transporter, amino acid-binding/permease protein, His/Glu/Gln/Arg/opine family [Lactobacillus crispatus CTV-05] Length = 537 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 71/214 (33%), Positives = 121/214 (56%), Gaps = 14/214 (6%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT--------- 52 K W + ++ + I +TL +A + ++ IG + +IR + T Sbjct: 287 KENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIIRTIPTPTTRGKRWTLN 346 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEI 109 ++ ++ YV IFRGTP++VQ VI+YG+ H+ + + VA +I +++N AY++E+ Sbjct: 347 VVKWLLSVYVEIFRGTPMMVQAAVIYYGIAQFWHLNL--NRTVAALIIVSINTGAYLAEV 404 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IR IIS P+GQ++A+ A+G+T Q + HIIL Q I +++EFI +K TSV S I Sbjct: 405 IRGGIISTPEGQFEAASALGMTHNQRMWHIILLQAIRNCLPSITNEFIVNIKDTSVLSII 464 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ E+F I S +++ Y ++ +YLILT Sbjct: 465 SVSELFFVGTTIASQSFKFFPTYLMISAIYLILT 498 >gi|322392259|ref|ZP_08065720.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus peroris ATCC 700780] gi|321144794|gb|EFX40194.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus peroris ATCC 700780] Length = 227 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 79/228 (34%), Positives = 128/228 (56%), Gaps = 19/228 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YV 62 F+ + P Y AIV T+ I+ + ++ I+G +A F + I ++ F Y+ Sbjct: 3 FSFLPKYLPYFNYGAIV-TIIISILVVLLGTILGVLLA----FAQRSKIKPLVWFSNLYI 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHI-------GIV---FDSFVAIIISLTLNFSAYISEIIRS 112 WIFRGTP++VQ+ +I Y L HI GI+ + II +++N AY+SE +R+ Sbjct: 58 WIFRGTPMMVQI-MIAYALMHISAPIIQIGILDVDLTRLIPGIIIISMNSGAYVSETVRA 116 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++PKGQ +A+Y++G+ K +R++ILPQ I L +EFI+I+K +S+ S I + Sbjct: 117 GINAVPKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVM 176 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E++ A + +TTY PL AF YLI+TS + E+ + Q Sbjct: 177 ELWNGATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFENRMGQG 224 >gi|19746459|ref|NP_607595.1| amino acid ABC transporter (permease protein) [Streptococcus pyogenes MGAS8232] gi|19748662|gb|AAL98094.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes MGAS8232] Length = 228 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 62/176 (35%), Positives = 107/176 (60%), Gaps = 10/176 (5%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIF-----YGLPHIG-----IVFDSFVAIIISLTLNFS 103 ++ +++ YVWIFRGTP++VQ+ + F +P IG + F + II ++LN Sbjct: 49 LTWVVNLYVWIFRGTPMVVQIMIAFAWMHFNNMPTIGFGVLDLDFSRLLPGIIIISLNSG 108 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AYISEI+R+ I ++PKGQ +A+Y++G+ + +R++ILPQ L +EFI+I+K + Sbjct: 109 AYISEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPALGNEFITIIKDS 168 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 ++ TI + E++ AQ +V+ TY P+ AF YL++T+ + +E + Q Sbjct: 169 ALLQTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMITTVMAQLLAVLERHMAQ 224 >gi|217958228|ref|YP_002336774.1| amino acid ABC transporter, permease protein [Bacillus cereus AH187] gi|229137442|ref|ZP_04266053.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST26] gi|217066252|gb|ACJ80502.1| amino acid ABC transporter, permease protein [Bacillus cereus AH187] gi|228646000|gb|EEL02223.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST26] Length = 214 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 104/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + + S I+ F V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGIVR-YTKIPVFSQILGFIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP +G+ + A+I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEVGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 IILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WSIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQ 176 >gi|16262492|ref|NP_435285.1| ABC transporter, permease [Sinorhizobium meliloti 1021] gi|307300764|ref|ZP_07580539.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|14523097|gb|AAK64697.1| ABC transporter, permease [Sinorhizobium meliloti 1021] gi|306904298|gb|EFN34883.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 222 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 119/202 (58%), Gaps = 3/202 (1%) Query: 3 YEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 YE+ F ++ SF QLL A + T+ ++C + +I L++ F A + I+ ++ Y Sbjct: 2 YEFNFAPVLASFDQLLVGAWL-TVRLSCAAMLIGLVVSVFCAWGKTA-GPAILRHVIDGY 59 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + I R TP LVQ+F IF+G+P +G+ A +++L +NF AY +EIIR+ I SI KGQ Sbjct: 60 IEIIRNTPFLVQIFFIFFGMPSLGLRLSPNSAALLALVVNFGAYGTEIIRAGIESIHKGQ 119 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A +A+GL+R Q R++++ + T L+S+FI ++ +TSV S I+ ++ + Sbjct: 120 VEAGWALGLSRPQIFRYVVMKPALRTVYPALTSQFIYLMLNTSVVSVISADDLAAAGNDL 179 Query: 182 VSTTYQPLIIYCELAFVYLILT 203 S T+ +Y + +YL L+ Sbjct: 180 QSATFASFEVYIAVTLIYLALS 201 >gi|196047128|ref|ZP_03114345.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB108] gi|229182976|ref|ZP_04310208.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BGSC 6E1] gi|196021998|gb|EDX60688.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB108] gi|228600433|gb|EEK58021.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BGSC 6E1] Length = 214 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 103/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A I+ V+S IIG + ++R + ++S ++ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVVGILR-YMKIPVVSQVLGIIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|170738364|ref|YP_001779624.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169820552|gb|ACA95134.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 218 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 64/188 (34%), Positives = 113/188 (60%), Gaps = 2/188 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 +F ID P LL A VVT+ I +FV+S ++G +A++++ + + + V + Sbjct: 2 FFQNAIDFLPILLKGA-VVTIEITACAFVLSSVLGLILALMKVSHNRAVAT-AGSTIVNV 59 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RG P++VQLF +++ LP +G+ + A ++ L + +SAY +E R+ I +I +GQ +A Sbjct: 60 IRGLPIIVQLFYMYFVLPDLGVQLSALQAGVLGLGIAYSAYQAENFRAGIEAIDRGQIEA 119 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++AIG+ +R ++LPQ + P + + +LK +SVASTIT+ EI + Q I S+ Sbjct: 120 AHAIGMRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVASTITVAEITRAGQLIASS 179 Query: 185 TYQPLIIY 192 T+Q + +Y Sbjct: 180 TFQNMSVY 187 >gi|52144669|ref|YP_082159.1| glutamine ABC transporter permease [Bacillus cereus E33L] gi|51978138|gb|AAU19688.1| ABC transporter, permease; probable glutamine ABC transporter, permease [Bacillus cereus E33L] Length = 214 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 103/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + ++S ++ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILR-YMKIPVVSQVLGIIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|15675409|ref|NP_269583.1| putative amino acid ABC transporter permease [Streptococcus pyogenes M1 GAS] gi|71911051|ref|YP_282601.1| arginine transporter permease [Streptococcus pyogenes MGAS5005] gi|94988863|ref|YP_596964.1| arginine transport system permease protein [Streptococcus pyogenes MGAS9429] gi|94990763|ref|YP_598863.1| arginine ABC transporter permease [Streptococcus pyogenes MGAS10270] gi|94992753|ref|YP_600852.1| arginine ABC transporter permease [Streptococcus pyogenes MGAS2096] gi|94994741|ref|YP_602839.1| arginine transport system permease protein artQ [Streptococcus pyogenes MGAS10750] gi|139473469|ref|YP_001128185.1| amino acid ABC transporter permease [Streptococcus pyogenes str. Manfredo] gi|209559673|ref|YP_002286145.1| Putative amino acid ABC transporter [Streptococcus pyogenes NZ131] gi|306827045|ref|ZP_07460343.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus pyogenes ATCC 10782] gi|13622596|gb|AAK34304.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes M1 GAS] gi|71853833|gb|AAZ51856.1| arginine transport system permease protein [Streptococcus pyogenes MGAS5005] gi|94542371|gb|ABF32420.1| arginine transport system permease protein [Streptococcus pyogenes MGAS9429] gi|94544271|gb|ABF34319.1| Arginine transport system permease protein artQ [Streptococcus pyogenes MGAS10270] gi|94546261|gb|ABF36308.1| Arginine transport system permease protein artQ [Streptococcus pyogenes MGAS2096] gi|94548249|gb|ABF38295.1| Arginine transport system permease protein artQ [Streptococcus pyogenes MGAS10750] gi|134271716|emb|CAM29949.1| putative amino acid ABC transporter permease protein [Streptococcus pyogenes str. Manfredo] gi|209540874|gb|ACI61450.1| Putative amino acid ABC transporter [Streptococcus pyogenes NZ131] gi|304430791|gb|EFM33802.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus pyogenes ATCC 10782] Length = 228 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 62/176 (35%), Positives = 107/176 (60%), Gaps = 10/176 (5%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIF-----YGLPHIG-----IVFDSFVAIIISLTLNFS 103 ++ +++ YVWIFRGTP++VQ+ + F +P IG + F + II ++LN Sbjct: 49 LTWVVNLYVWIFRGTPMVVQIMIAFAWMHFNNMPTIGFGVLDLDFSRLLPGIIIISLNSG 108 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AYISEI+R+ I ++PKGQ +A+Y++G+ + +R++ILPQ L +EFI+I+K + Sbjct: 109 AYISEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPALGNEFITIIKDS 168 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 ++ TI + E++ AQ +V+ TY P+ AF YL++T+ + +E + Q Sbjct: 169 ALLQTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMVTTVMAQLLAVLERHMAQ 224 >gi|57242094|ref|ZP_00370034.1| amino acid ABC transporter, permease protein [Campylobacter upsaliensis RM3195] gi|57017286|gb|EAL54067.1| amino acid ABC transporter, permease protein [Campylobacter upsaliensis RM3195] Length = 250 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 69/198 (34%), Positives = 117/198 (59%), Gaps = 14/198 (7%) Query: 15 QLLYAAIVVTLPIACISFVISLI---IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 Q + TL ++ ++ +I+++ IG +A +I ++ YV IF+ TPL+ Sbjct: 42 QTFMDGFIYTLQVSVLALLIAVVFGTIGGVMATSKI----AVLRAYTRIYVEIFQNTPLV 97 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +Q+F ++YGLPH+GI D FV ++ + AY+SE++RS I+++PKGQ++AS + G T Sbjct: 98 IQIFFLYYGLPHLGINLDLFVIGVLGIGAYHGAYVSEVVRSGILAVPKGQFEASASQGFT 157 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST--TYQPL 189 Q +R+II+PQTI P+S++ I+++K+TSV + E+ TA + Y P Sbjct: 158 YTQQMRYIIVPQTIKIILPPMSNQMINLIKNTSVLLIVGGVELMSTADSYAADYGNYAPA 217 Query: 190 IIYCELAFVYLILTSFCY 207 I+ AF+Y I+ CY Sbjct: 218 YIFA--AFLYFIV---CY 230 >gi|294631351|ref|ZP_06709911.1| arginine/ornithine transporter [Streptomyces sp. e14] gi|292834684|gb|EFF93033.1| arginine/ornithine transporter [Streptomyces sp. e14] Length = 313 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 127/219 (57%), Gaps = 22/219 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + TL + +S +I ++ G +AV+R+ + + S I FY+W FRGTP+LV Sbjct: 65 FDDRITTGVGKTLLLTVLSMLIGIVGGIVLAVMRLS-KNPVTSSIAWFYIWFFRGTPVLV 123 Query: 73 QLFVIFYGLPHIGIVFD-----------------SFVAIIISLTLNFSAYISEIIRSSII 115 QLF+ F ++G+VF+ + ++ L LN +AY++EI R+ ++ Sbjct: 124 QLFLWF----NLGLVFEYINLMPFYKDYWSNFMTPLLTALLGLGLNEAAYMAEICRAGLL 179 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ +GQ +A++A+G++ +T+R II+PQ + P +E I++LK+TS+ + + PE+F Sbjct: 180 AVDEGQTEAAHALGMSHGKTLRRIIIPQAMRVIVPPTGNEVINMLKTTSLVAAVQYPELF 239 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + AQ I + + P+ +Y A YLILTS + Q +E Sbjct: 240 RFAQDIGTVSGAPVEMYFLAAAWYLILTSVLSVGQYYLE 278 >gi|228906389|ref|ZP_04070273.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis IBL 200] gi|228853301|gb|EEM98074.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis IBL 200] Length = 214 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 103/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + ++S ++ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILR-YMKIPVVSQVLGIIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITATIVALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|56807954|ref|ZP_00365770.1| COG0765: ABC-type amino acid transport system, permease component [Streptococcus pyogenes M49 591] Length = 227 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 62/176 (35%), Positives = 107/176 (60%), Gaps = 10/176 (5%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIF-----YGLPHIG-----IVFDSFVAIIISLTLNFS 103 ++ +++ YVWIFRGTP++VQ+ + F +P IG + F + II ++LN Sbjct: 48 LTWVVNLYVWIFRGTPMVVQIMIAFAWMHFNNMPTIGFGVLDLDFSRLLPGIIIISLNSG 107 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AYISEI+R+ I ++PKGQ +A+Y++G+ + +R++ILPQ L +EFI+I+K + Sbjct: 108 AYISEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPALGNEFITIIKDS 167 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 ++ TI + E++ AQ +V+ TY P+ AF YL++T+ + +E + Q Sbjct: 168 ALLQTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMVTTVMAQLLAVLERHMAQ 223 >gi|306831687|ref|ZP_07464844.1| glutamine ABC superfamily ATP binding cassette transporter permease protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|261411856|gb|ACX81324.1| Sbs9 [Streptococcus gallolyticus subsp. gallolyticus] gi|304426112|gb|EFM29227.1| glutamine ABC superfamily ATP binding cassette transporter permease protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 745 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 127/216 (58%), Gaps = 9/216 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + L+ +++ QLL + + TL + ISF I+++IG ++ + + ++ I +V I Sbjct: 528 WGLLKNNYSQLL-SGLGKTLSLTLISFAIAMVIGIIFGMMAVA-PNKVLRTISAVFVDIV 585 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RG PL++ IF+G+P++ + FVA I+L+LN AYI+EI+R I ++P Sbjct: 586 RGIPLMIVAAFIFWGIPNLLESITGKQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVP 645 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +AS ++G++ +T++ IILPQ + ++F+ LK T++ S I + E+FQT Sbjct: 646 QGQMEASRSLGISYSKTMQKIILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTG 705 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + I++ YQ +Y LA +YL++ + + ++E Sbjct: 706 KIIIARNYQSFRMYAILAVIYLVIITLLTRLAKRLE 741 >gi|21910697|ref|NP_664965.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes MGAS315] gi|28895613|ref|NP_801963.1| amino acid ABC transporter (permease protein) [Streptococcus pyogenes SSI-1] gi|21904900|gb|AAM79768.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes MGAS315] gi|28810862|dbj|BAC63796.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes SSI-1] Length = 228 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 62/176 (35%), Positives = 107/176 (60%), Gaps = 10/176 (5%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIF-----YGLPHIG-----IVFDSFVAIIISLTLNFS 103 ++ +++ YVWIFRGTP++VQ+ + F +P IG + F + II ++LN Sbjct: 49 LTWVVNLYVWIFRGTPMVVQIMIAFAWMHFNNMPTIGFGVLDLDFSRLLPGIIIISLNSG 108 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AYISEI+R+ I ++PKGQ +A+Y++G+ + +R++ILPQ L +EFI+I+K + Sbjct: 109 AYISEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPALGNEFITIIKDS 168 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 ++ TI + E++ AQ +V+ TY P+ AF YL++T+ + +E + Q Sbjct: 169 ALLQTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMVTTVMAQLLAVLERHMAQ 224 >gi|157150410|ref|YP_001450999.1| amino acid-binding permease protein [Streptococcus gordonii str. Challis substr. CH1] gi|157075204|gb|ABV09887.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus gordonii str. Challis substr. CH1] Length = 521 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 115/203 (56%), Gaps = 11/203 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF--FSDTIISLIMHFYVW----- 63 +++PQ L A +TL I+ + L+IG I V R + ++++ + W Sbjct: 287 ENWPQFLRGA-GLTLLISITGTITGLLIGLLIGVFRTAPTSKNKALAILQKLFGWFLNVY 345 Query: 64 --IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 IFRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ KG Sbjct: 346 IEIFRGTPMIVQSMVIYYGSAQAFGISIDRTIAAIFIVSINTGAYMSEIVRGGIFAVDKG 405 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ A+G+T QT+R I+LPQ I +EF+ +K TSV + I++ E++ + Sbjct: 406 QFEAATALGMTHGQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVVELYFSGNT 465 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I + TY+ + +A +Y +LT Sbjct: 466 IATQTYKYFQTFTIIAVIYFVLT 488 >gi|288904530|ref|YP_003429751.1| amino acid ABC transporter [Streptococcus gallolyticus UCN34] gi|306830524|ref|ZP_07463692.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325977501|ref|YP_004287217.1| inner membrane amino-acid ABC transporter permease yecS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731255|emb|CBI12805.1| putative ABC transporter amino acid-binding protein/amino acid ABC transporter permease protein [Streptococcus gallolyticus UCN34] gi|304427318|gb|EFM30422.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177429|emb|CBZ47473.1| Inner membrane amino-acid ABC transporter permease protein yecS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 523 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 116/203 (57%), Gaps = 11/203 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF--FSDTIISLIMHFYVWI---- 64 +++ Q L A VTL I+ I V+ L IG I V R ++ +++ + + W+ Sbjct: 290 NNWNQFLRGA-GVTLFISIIGTVVGLFIGLLIGVYRTAPKAANKVLAGLQKAFGWVLNVY 348 Query: 65 ---FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 FRGTP++VQ VI+YG GI D +A ++ +++N AY+SEI+R I ++ KG Sbjct: 349 IEVFRGTPMIVQAMVIYYGTAQAFGISIDRTLAAVLIVSINTGAYMSEIVRGGIFAVDKG 408 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ A+G T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + Sbjct: 409 QFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNT 468 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + + TYQ + +A +Y +LT Sbjct: 469 VATQTYQYFQTFTIIAIIYFVLT 491 >gi|206577408|ref|YP_002239112.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288936013|ref|YP_003440072.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|290512818|ref|ZP_06552183.1| amino acid ABC transporter [Klebsiella sp. 1_1_55] gi|206566466|gb|ACI08242.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288890722|gb|ADC59040.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] gi|289774701|gb|EFD82704.1| amino acid ABC transporter [Klebsiella sp. 1_1_55] Length = 241 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 56/155 (36%), Positives = 93/155 (60%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FY+W+FRGTP+L Q+ ++ LP G+ F +F +++L+LN AY++EI+RS + ++ Sbjct: 57 FYLWLFRGTPVLFQIIFVYNVLPGFGLRFSAFTCAVLALSLNEGAYMAEILRSGLQAVKS 116 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ A A+G+T Q +R I+LPQ P+ ++ IS+LKS+++ S I + E+ A Sbjct: 117 GQRTAGMALGMTHGQIMRKIVLPQAARIVLPPMGNQMISMLKSSALVSVIAVQELLLVAN 176 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + S +++ C YL+LTS I Q +E Sbjct: 177 QAASASFRYFEALCAAGIYYLLLTSLFMIFQSWLE 211 >gi|70729727|ref|YP_259466.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68344026|gb|AAY91632.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 215 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 57/150 (38%), Positives = 97/150 (64%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 ++ + Y+ +FRGTP LVQLF++++G P IG+ + F A +I L LN +AY++E IR Sbjct: 48 LLRCLARVYISVFRGTPCLVQLFLLYFGGPQIGLELEPFSAGVIGLGLNIAAYMAESIRG 107 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I ++ GQ +A+ +IG + QT+ I LPQT PL ++++K +++ STI++ Sbjct: 108 AISNVDPGQVEAARSIGFGKGQTLWLITLPQTAKLMIRPLGVNAVALIKGSALVSTISVV 167 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 E+ TAQR +S+TY+P I+ A +Y+ + Sbjct: 168 ELSYTAQRFISSTYKPFEIFMVSAILYIAM 197 >gi|330831727|ref|YP_004394679.1| putative amino-acid ABC transporter permease YckJ [Aeromonas veronii B565] gi|328806863|gb|AEB52062.1| Probable amino-acid ABC transporter permease protein YckJ [Aeromonas veronii B565] Length = 222 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 128/200 (64%), Gaps = 8/200 (4%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ +A FV++L++ +A++R+F I L M Y+ FRGTPLLVQLF+++YGLP Sbjct: 23 TMEMALWGFVLALVLSLALAIVRVFRVPAIHWLAM-LYISFFRGTPLLVQLFLLYYGLPQ 81 Query: 84 IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 + +F D+F A I+ LTL+F+AY++E IR++I+ I K Q +A+ +IG++R Q ++ II Sbjct: 82 LFPIFVGMDAFTAAIVGLTLHFAAYMAESIRAAILGIHKSQMEAALSIGMSRYQAMQRII 141 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LPQ + L + FI ++KSTS+A T+ + EI AQ S++++ + +A +Y Sbjct: 142 LPQAARIATPSLMNYFIDMIKSTSLAFTLGVAEIMGKAQMEASSSFKFFESFMAVALIYW 201 Query: 201 IL----TSFCYIIQIKIESS 216 ++ T ++++I++ + Sbjct: 202 VVVIFFTRLQHLLEIRLNRA 221 >gi|322373408|ref|ZP_08047944.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. C150] gi|321278450|gb|EFX55519.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. C150] Length = 731 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 68/214 (31%), Positives = 125/214 (58%), Gaps = 9/214 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 LI +++ QLL + +T+ + +SF I++IIG ++ + + T+ +I +V + RG Sbjct: 516 LIKNNYHQLL-QGLGITIGLTLLSFAIAMIIGVIFGMMAVAPNKTL-RVISQVFVDVVRG 573 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ I++G+P++ + FVA I+L+LN AYI+EI+R I ++P G Sbjct: 574 IPLMIVAAFIYWGIPNLIENITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPIG 633 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G+ T+R +ILPQ + ++F+ LK T++ S I + E+FQT + Sbjct: 634 QMEASRSLGVPYNTTMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKI 693 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I++ YQ +Y LA +YL++ +F + ++E Sbjct: 694 IIARNYQSFRMYAILAILYLVIITFLTKLAKRLE 727 >gi|239833764|ref|ZP_04682092.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Ochrobactrum intermedium LMG 3301] gi|239821827|gb|EEQ93396.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Ochrobactrum intermedium LMG 3301] Length = 230 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 113/201 (56%), Gaps = 1/201 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VTL A F I+L++G A++R IIS V R TPLLVQLF ++Y Sbjct: 26 GLTVTLKAAATGFAIALVLGLVFALLR-RSPYKIISWPTTVVVEFLRDTPLLVQLFFLYY 84 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 LP GIV +F+ ++L L +SAY SE+ R I +IP+GQW+A+ A+ LT +T R I Sbjct: 85 VLPVYGIVLPAFLTGALALGLQYSAYTSEVYRGGIEAIPRGQWEAARALNLTPWRTYRDI 144 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ++PQ I + + +S+LK T V S ++I ++ A I T++ L+ + ++ Sbjct: 145 VIPQAIPRIIPAMGNYLVSMLKETPVLSVVSIVDMLNLANLIGDRTFEYLVPLSMVGLIF 204 Query: 200 LILTSFCYIIQIKIESSVTQH 220 L+LT C + +E ++ ++ Sbjct: 205 LVLTLICSALIRLLERTLPKN 225 >gi|159905112|ref|YP_001548774.1| polar amino acid ABC transporter inner membrane subunit [Methanococcus maripaludis C6] gi|159886605|gb|ABX01542.1| polar amino acid ABC transporter, inner membrane subunit [Methanococcus maripaludis C6] Length = 226 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/198 (37%), Positives = 117/198 (59%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 L I PQL+ +I+ T+ I S +I L +G + + RI + + I I FY+ Sbjct: 11 LELFIKIIPQLIDGSIL-TIKITVFSIIIGLFLGTILGMGRISY-NIIYRYISSFYIEFV 68 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQ+ +I++GLP GI ++ A I++L LN AY+ EII++ I+S+ GQ +A+ Sbjct: 69 RGTPLLVQIMIIYFGLPSFGINLSAYTAGILALGLNSGAYVGEIIKAGILSVHVGQMEAA 128 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ Q +R+IILPQ + +EFI +LK +S+ S I I E+ + ++I S+T Sbjct: 129 RSLGMNYAQAMRYIILPQAFRNVLPAIGNEFILLLKDSSLLSVIAIVELTRVGKQIYSST 188 Query: 186 YQPLIIYCELAFVYLILT 203 Y +A YLI+T Sbjct: 189 YNAWTPLLGVALFYLIMT 206 >gi|308174187|ref|YP_003920892.1| high affinity arginine ABC transporter permease [Bacillus amyloliquefaciens DSM 7] gi|307607051|emb|CBI43422.1| high affinity arginine ABC transporter (permease) [Bacillus amyloliquefaciens DSM 7] Length = 219 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 122/207 (58%), Gaps = 12/207 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVI 77 + VTL I +S VI L++G +++ +I TI L I FY IFRGTPL++QL +I Sbjct: 18 GLAVTLKIVLVSAVIGLVLGIVLSLFKI---STISPLKWIADFYTSIFRGTPLVLQLMII 74 Query: 78 FYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++G+P + G D F A + +L+LN +AY+SEIIR+ I +I KGQ +A+ A+G+ + + Sbjct: 75 YFGMPQLLGFQIDQFWAAVTALSLNSAAYVSEIIRAGINAIDKGQKEAAVALGVPYGKMM 134 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY---QPLIIYC 193 +H++LPQ + + +E I++ K +++ + I + +I + A + + TY +PLI+ Sbjct: 135 KHLLLPQAFKNISPAIINELITLTKESAIVTVIGLGDIMRRAYQSGAATYNYLEPLIVA- 193 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQH 220 F+Y +L I +E + + Sbjct: 194 --GFIYYVLVLILAFIGKGVERKLKAN 218 >gi|262283287|ref|ZP_06061053.1| amino acid-binding permease [Streptococcus sp. 2_1_36FAA] gi|262260778|gb|EEY79478.1| amino acid-binding permease [Streptococcus sp. 2_1_36FAA] Length = 521 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 115/203 (56%), Gaps = 11/203 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF--FSDTIISLIMHFYVW----- 63 +++PQ L A +TL I+ + L+IG I V R + ++++ + W Sbjct: 287 ENWPQFLRGA-GLTLLISITGTITGLLIGLLIGVFRTAPTSKNKALAILQKLFGWFLNVY 345 Query: 64 --IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 IFRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ KG Sbjct: 346 IEIFRGTPMIVQSMVIYYGSAQAFGISIDRTIAAIFIVSINTGAYMSEIVRGGIFAVDKG 405 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ A+G+T QT+R I+LPQ I +EF+ +K TSV + I++ E++ + Sbjct: 406 QFEAATALGMTHGQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVVELYFSGNT 465 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I + TY+ + +A +Y +LT Sbjct: 466 IATQTYKYFQTFTIIAVIYFVLT 488 >gi|171777495|ref|ZP_02919217.1| hypothetical protein STRINF_00044 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283205|gb|EDT48629.1| hypothetical protein STRINF_00044 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 523 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 11/202 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-------FFSD--TIISLIMHFYV 62 ++ Q L A VTL I+ I ++ L IG I V R F + + +++ Y+ Sbjct: 291 NWNQFLRGA-GVTLLISIIGTIVGLFIGLLIGVYRTAPKAANKFLAGLQKVFGWLLNVYI 349 Query: 63 WIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 IFRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ KGQ Sbjct: 350 EIFRGTPMIVQAMVIYYGTAQAFGISIDRTLAAIFIVSINTGAYMSEIVRGGIFAVDKGQ 409 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++A+ A+G T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + + Sbjct: 410 FEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTV 469 Query: 182 VSTTYQPLIIYCELAFVYLILT 203 + TYQ + +A +Y +LT Sbjct: 470 ATQTYQYFQTFTIIAIIYFVLT 491 >gi|116333854|ref|YP_795381.1| ABC-type amino acid transport system, permease component [Lactobacillus brevis ATCC 367] gi|116099201|gb|ABJ64350.1| ABC-type amino acid transport system, permease component [Lactobacillus brevis ATCC 367] Length = 213 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 57/164 (34%), Positives = 104/164 (63%), Gaps = 5/164 (3%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 ++ +++ YVW+ RGTPLL+QL +FYGLP IG+VF + A + + LN++AY +EI R Sbjct: 47 LTWLINIYVWLMRGTPLLLQLIFVFYGLPIIGVVFQRYDAALFAFILNYTAYFAEIFRGG 106 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + +IP GQ++++ + LTR QT+R I++PQ + + +E I+++K +S+ I + + Sbjct: 107 LQAIPVGQYESARVLRLTRWQTLRRIVIPQVVKIVLPSIGNEVINLIKDSSLVYVIGLGD 166 Query: 174 IFQTAQRIVS--TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + + +S T PL++ + +YL+LT+ C I+ ++E Sbjct: 167 LLRAGNVAMSRDVTLVPLVL---VGVIYLLLTAVCTIVLKRLEK 207 >gi|162447510|ref|YP_001620642.1| ABC transporter permease [Acholeplasma laidlawii PG-8A] gi|161985617|gb|ABX81266.1| ABC-type transport system, permease component [Acholeplasma laidlawii PG-8A] Length = 225 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 132/224 (58%), Gaps = 13/224 (5%) Query: 6 FNLIIDSF-PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFY 61 F+ ++D F + L +++T+ +A +I++++G IAVI +F I++ I Y Sbjct: 3 FSFLLDLFYVKTLLQGVLITIVLA----LIAVLMGTLIAVIPTYFRLSKHKILNFIGGSY 58 Query: 62 VWIFRGTPLLVQLFVIFY--GLPH---IGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 V I RGTPLLVQ+ +I+ LP +G+ F +F+ +++L +N SAY SE R+ I+S Sbjct: 59 VEIIRGTPLLVQVMLIYAIVKLPVMTVLGMDFGAFLLGMVALIINSSAYASETFRAGILS 118 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I KGQ +A ++G+T K T+ HII+PQ I L +EF++++K TS+ + I E+ Sbjct: 119 IEKGQKEAGLSLGMTEKSTMLHIIMPQAIKNIMPSLGNEFVTLIKETSIFMYLGISELMY 178 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +AQ + ++TY+ +Y A +Y +LT + K+E + + Sbjct: 179 SAQIVKTSTYRTKEVYIVTALLYFVLTFTTSKLMSKLEKRMRKQ 222 >gi|10955057|ref|NP_059713.1| hypothetical protein pTi_041 [Agrobacterium tumefaciens] gi|33860188|sp|P35114|OCCM_AGRTU RecName: Full=Octopine transport system permease protein occM gi|154764|gb|AAA50515.1| transport protein [Agrobacterium tumefaciens] gi|496542|emb|CAA82984.1| OccM [Agrobacterium tumefaciens] gi|8572696|gb|AAF77142.1| occM [Agrobacterium tumefaciens] gi|81176504|gb|ABB59526.1| OccM [Agrobacterium tumefaciens] Length = 245 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/196 (35%), Positives = 117/196 (59%), Gaps = 10/196 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + I + L +A S + ++ F +A++R+ + L FY++ FRGTPLLVQ+++ Sbjct: 15 LLSGIPLALQLAVFSVALGTVLAFGLALMRVS-RLWWLDLPARFYIFAFRGTPLLVQIYI 73 Query: 77 IFYGL---PHIGIVF------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 I+YGL P + F D++ + +L LN +AY +EI+R ++S+P GQ +A+ A Sbjct: 74 IYYGLSQFPDVRHSFIWPFLRDAYWCAMAALALNTAAYTAEIMRGGLLSVPAGQIEAAKA 133 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G+ R + R I++PQ I S+E I ++KSTS+ASTITI EI A +++S +Y+ Sbjct: 134 CGMGRVKLFRRIVIPQAIRQMLPGYSNEVILMVKSTSLASTITIMEITGIAAKLISESYR 193 Query: 188 PLIIYCELAFVYLILT 203 + ++ +YLIL Sbjct: 194 TVEVFSCAGAIYLILN 209 >gi|139437313|ref|ZP_01771473.1| Hypothetical protein COLAER_00452 [Collinsella aerofaciens ATCC 25986] gi|133776960|gb|EBA40780.1| Hypothetical protein COLAER_00452 [Collinsella aerofaciens ATCC 25986] Length = 436 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 68/196 (34%), Positives = 121/196 (61%), Gaps = 3/196 (1%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +++ S P +++ +++L I ++F +++ GF ++++RI S I+ + YV I RG Sbjct: 201 ILVQSLP-IVFKGFLMSLSIVLVAFPLAIPFGFALSLMRISKS-RILRCLAGIYVNIIRG 258 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TP +Q+++ F+GLP G+ D +V +I + +N SAY+ EI R+ I SIPKGQ +A+ + Sbjct: 259 TPAFLQIYIAFFGLPLAGVKVDDYVLGVIVMAMNSSAYLCEIFRAGIQSIPKGQNEAARS 318 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ QT+ ++++PQT L+SEFI + K TS+ + + + EI A+ IV+TT Sbjct: 319 LGMNAFQTLLYVMIPQTFRNVLPTLTSEFILLYKDTSLLAAVGVVEIVMNARTIVATTGS 378 Query: 188 PLIIYCELAFVYLILT 203 + Y A YL++T Sbjct: 379 -ITPYVVAALFYLVIT 393 >gi|301052296|ref|YP_003790507.1| ABC transporter permease [Bacillus anthracis CI] gi|300374465|gb|ADK03369.1| ABC transporter, permease; probable glutamine ABC transporter, permease [Bacillus cereus biovar anthracis str. CI] Length = 214 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 103/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ ++S IIG I ++R + ++S I+ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIILSFIIGSVIGILR-YMKIPVVSQILGIIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|222082275|ref|YP_002541640.1| octopine ABC transporter [Agrobacterium radiobacter K84] gi|221726954|gb|ACM30043.1| octopine ABC transporter [Agrobacterium radiobacter K84] Length = 242 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 121/206 (58%), Gaps = 12/206 (5%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W N + ++F L+ +AI +TL +A +S + ++ +A+ R+ T + FYV+ Sbjct: 3 DW-NFLSETFVSLI-SAIPLTLSLAGLSILFGAVLALGLAMARLS-GITALDGFARFYVF 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSI 114 +FRGTPLLVQ+F+I+YGL V S + +++LTLN +AY SEIIR + Sbjct: 60 VFRGTPLLVQIFLIYYGLGQFPAVRHSILWPILRQPYWCAVLALTLNTAAYASEIIRGGL 119 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +S+P GQ +A+ A G+ R R II P I + +E IS++K+TS+AS IT+ E+ Sbjct: 120 LSVPHGQIEAARACGMGRFMQFRRIIWPLAIRQALPGYGNEMISMVKATSLASIITLMEV 179 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYL 200 A +++S TY+ + ++ +YL Sbjct: 180 TGVAAKLISETYRAIEVFIVAGAIYL 205 >gi|160936725|ref|ZP_02084092.1| hypothetical protein CLOBOL_01616 [Clostridium bolteae ATCC BAA-613] gi|158440516|gb|EDP18261.1| hypothetical protein CLOBOL_01616 [Clostridium bolteae ATCC BAA-613] Length = 171 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 55/127 (43%), Positives = 85/127 (66%), Gaps = 3/127 (2%) Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP +GI D+F + ++ ++N AY SE IR++I ++P GQ +A Y +GL+ QT+ I Sbjct: 31 GLPGLGITLDAFPSAVVVFSVNTGAYASETIRAAIEAVPAGQLEAGYCVGLSYTQTMMRI 90 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + + PLS+ I ++K TS+A+ IT+ E+F +AQRI + TY+P +Y E+ +Y Sbjct: 91 ILPQALRIAFPPLSNSLIGLVKDTSLAANITVMEMFMSAQRIAARTYEPFALYREVGIIY 150 Query: 200 LILTSFC 206 LI FC Sbjct: 151 LI---FC 154 >gi|325000355|ref|ZP_08121467.1| amino acid ABC transporter membrane protein [Pseudonocardia sp. P1] Length = 301 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 115/211 (54%), Gaps = 23/211 (10%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY---- 79 TL + +S I + G +AV+R+ + ++S + Y+W+FRGTPL+ QL ++ Sbjct: 66 TLVLTALSMAIGIAGGIGLAVMRLS-PNPVLSSVAAVYLWVFRGTPLIAQLLFWYFLSAL 124 Query: 80 ------GLP--------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 G+P + F A ++ L LN +AY++EI+RS I S+ GQ +A+ Sbjct: 125 YPRLSLGIPFGPEFVVVDTNTLISPFAAALLGLGLNEAAYMAEIVRSGIQSVDGGQSEAA 184 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G+TR QT+R ++LPQ + P +E I +LK+TS+ I E+ + QRI S Sbjct: 185 GALGMTRAQTLRRVVLPQAMRVIVPPTGNETIGMLKTTSLVVVIGYLELLTSVQRIYSAN 244 Query: 186 YQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 ++ PL+I A YL+LTS + Q +E Sbjct: 245 FEVIPLLIVA--AAWYLVLTSLLTVGQRAVE 273 >gi|288905601|ref|YP_003430823.1| amino acid ABC transporter amino acid-binding/permease protein [Streptococcus gallolyticus UCN34] gi|288732327|emb|CBI13897.1| putative amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus gallolyticus UCN34] Length = 741 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 67/216 (31%), Positives = 127/216 (58%), Gaps = 9/216 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + L+ +++ QLL + + TL + ISF I+++IG ++ + + ++ I +V I Sbjct: 524 WGLLKNNYSQLL-SGLGKTLSLTLISFAIAMVIGIIFGMMAVA-PNKVLRTISAVFVDIV 581 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RG PL++ IF+G+P++ + FVA I+L+LN AYI+EI+R I ++P Sbjct: 582 RGIPLMIVAAFIFWGIPNLLESITGKQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVP 641 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +AS ++G++ +T++ +ILPQ + ++F+ LK T++ S I + E+FQT Sbjct: 642 QGQMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTG 701 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + I++ YQ +Y LA +YL++ + + ++E Sbjct: 702 KIIIARNYQSFRMYAILAVIYLVMITLLTRLAKRLE 737 >gi|330812509|ref|YP_004356971.1| ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380617|gb|AEA71967.1| putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 216 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 64/184 (34%), Positives = 110/184 (59%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ ++F+ +IG I V+RI S + I Y+ +F+GTPLL+QLF++F+G+ Sbjct: 20 TLALSLVAFIGGGVIGLLIMVLRISKS-ALPRNIARTYIELFQGTPLLMQLFLVFFGVAL 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 G+ ++A I+LTL SAY++EI R + SI GQW+AS ++ L + +R++ILPQ Sbjct: 79 AGVEISPWMAAAIALTLFTSAYLAEIWRGCVDSISHGQWEASASLALNPLEQLRYVILPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T+V S I E+ +T + + T++P ++Y +A Y +L Sbjct: 139 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGGMLANATFEPFMVYGLVALGYFLL- 197 Query: 204 SFCY 207 CY Sbjct: 198 --CY 199 >gi|15604006|ref|NP_220521.1| putative glutamine transport system permease protein GLNP (glnP) [Rickettsia prowazekii str. Madrid E] gi|729594|sp|P41083|GLNP_RICPR RecName: Full=Putative glutamine transport system permease protein glnP gi|409937|gb|AAA18328.1| putative GlnP analog [Rickettsia prowazekii] gi|3860697|emb|CAA14598.1| PUTATIVE GLUTAMINE TRANSPORT SYSTEM PERMEASE PROTEIN GLNP (glnP) [Rickettsia prowazekii] gi|292571724|gb|ADE29639.1| Amino acid ABC transporter permease protein [Rickettsia prowazekii Rp22] Length = 218 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/203 (33%), Positives = 125/203 (61%), Gaps = 7/203 (3%) Query: 9 IIDSFPQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++ +P++L+ +VTL + I+ ++ L+IG +A+ ++ + ++ L +FY IFR Sbjct: 5 LLKYYPKILFIIEGTLVTLKYSVIAVILGLVIGMLLAICKVN-KNRVLRLFANFYTSIFR 63 Query: 67 GTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 GTPLLVQL +I++ P+I I F+ F+A +IS LN AY+SE+IR+ I ++ KGQ++A+ Sbjct: 64 GTPLLVQLSIIYFAAPYIINIKFNVFMAGVISFALNSGAYVSEVIRAGINTVDKGQFEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+ + + ++ IILPQ I L +E ++++K +++ S + ++ + AQ + T Sbjct: 124 EALAIPKFLIMKDIILPQAINNIFPSLVNELVNLIKESAIISMLGEMDLMRRAQIVSIET 183 Query: 186 YQ---PLIIYCELAFVYLILTSF 205 Y P++I ++ +IL SF Sbjct: 184 YNYFFPMLIAACCYYILVILISF 206 >gi|213584785|ref|ZP_03366611.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 145 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/138 (44%), Positives = 90/138 (65%), Gaps = 2/138 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L+I+S P LL A V TL ++ L++GF +A++R+ + + FY+ IFR Sbjct: 6 QLVIESLPYLLKGA-VFTLQLSIGGMFFGLLLGFVLALMRMS-PLWPVRWLARFYISIFR 63 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPL+ QLF+I+YGLP GI D A +I L+LN +AY SE +R++I +I KGQW+A+ Sbjct: 64 GTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISAIDKGQWEAAA 123 Query: 127 AIGLTRKQTIRHIILPQT 144 +IG+T QT+R ILPQ Sbjct: 124 SIGMTPWQTLRRAILPQA 141 >gi|167461579|ref|ZP_02326668.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus larvae subsp. larvae BRL-230010] Length = 217 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/201 (37%), Positives = 115/201 (57%), Gaps = 8/201 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ + +P L A TL +A + + I+G FI ++RI I+ I Y+ Sbjct: 5 FSFLATYWPMFLKGA-GYTLVLAFFTVICGTILGIFICLMRIS-KIKIVKGIAAAYIEFL 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQL++I++ LP GI V+ I +LTLN +AY++EI R+ I SI KGQ +A+ Sbjct: 63 RGTPLLVQLYIIYFALPQFGISLPGMVSGIAALTLNSAAYVAEIFRAGIESIDKGQMEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+T ++ II+PQ I L +EFI I+K +S+ S + I ++ A + T Sbjct: 123 RSLGMTHNMAMKLIIIPQAIRNILPALGNEFIVIIKESSIVSIVGITDLMFNADTVRGVT 182 Query: 186 Y---QPLIIYCELAFVYLILT 203 Y +PLI+ A VY I+T Sbjct: 183 YKAFEPLIVA---AVVYFIMT 200 >gi|319943563|ref|ZP_08017845.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lautropia mirabilis ATCC 51599] gi|319743378|gb|EFV95783.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lautropia mirabilis ATCC 51599] Length = 217 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 57/168 (33%), Positives = 106/168 (63%), Gaps = 4/168 (2%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 +V+L + CI+ ++S+ +G +A++R+ + + + Y+W+ RGTPL++QL I+Y L Sbjct: 16 LVSLELFCITLLLSIPLGVALALMRLS-RHRWLGVTVSGYLWLMRGTPLMLQLLFIYYAL 74 Query: 82 PHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 P + GI F A +++ LN++AY +EI R+ I SI +GQ++ + +G+ QT+R Sbjct: 75 PLLPGGGIQLPDFPAAVVAFALNYAAYFAEIFRAGIQSIDRGQYEGAKVLGMNYPQTMRR 134 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 I++PQ I PLS+EFI+++K TS+ + + ++ + A+ IV + Sbjct: 135 IVMPQVIRRVLPPLSNEFITLVKDTSLIYVLALNDLLRAARGIVQRDF 182 >gi|299821270|ref|ZP_07053158.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] gi|299816935|gb|EFI84171.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] Length = 240 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 116/200 (58%), Gaps = 9/200 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +I D P LL + +TL I +S + I+G +A+ RI+ ++S + Y+ FR Sbjct: 10 KMIGDFIPTLL-GYLPITLYILIVSLIFGFILGLLLALTRIY-RVPVLSQLGKLYISFFR 67 Query: 67 GTPLLVQLFVIFYGLPHI----GI---VFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 GTP++VQLF++FYG+P I GI D A I + L+ +A I+EI+R+ + S+ K Sbjct: 68 GTPIMVQLFIVFYGIPAITALVGIDTSKMDPLYAAIATYALSSAAGIAEIVRAGVNSVEK 127 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+Y+IGLT +QT I+LPQ + + + I LK TS+A +I + ++ Q Sbjct: 128 GQEEAAYSIGLTGRQTFLRIVLPQALLQAMPNFGNMIIGFLKDTSLAFSIGVMDMSGRGQ 187 Query: 180 RIVSTTYQPLIIYCELAFVY 199 ++S++ L +Y LA +Y Sbjct: 188 TLISSSNHSLEVYIALAVIY 207 >gi|13475942|ref|NP_107512.1| amino acid ABC transporter protein, permease protein [Mesorhizobium loti MAFF303099] gi|14026702|dbj|BAB53298.1| amino acid ABC transporter protein, permease protein [Mesorhizobium loti MAFF303099] Length = 219 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/215 (32%), Positives = 121/215 (56%), Gaps = 10/215 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + + P L+ + +T+ + V++ I+G IA+ R + +S + + Sbjct: 1 MEWDW-DFVWQIMPTLI-QGVKITILATLLGSVLAAIVGLGIALAR-RSPNKALSRTVGW 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL+ IFY LP IGI+ VA +I L L++ Y +E+ R+ I ++P+G Sbjct: 58 SAEFIRGTPLLVQLYFIFYVLPDIGILLPPLVAGVIGLGLHYGTYTAEVYRAGIDNVPRG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A L+ +QT HII+PQ I L++ FI++ K T + S IT+ E+ A+ Sbjct: 118 QWEAAKACNLSARQTWTHIIIPQAIPPMIPALANYFIAMFKETPLLSAITVLELMNQARS 177 Query: 181 IVSTTYQPLIIYCE---LAFVYLILTSFCYIIQIK 212 + +T Y+ Y E L + + S C ++ ++ Sbjct: 178 VANTYYR----YIEPITLVGAFFLAISLCSVVLLR 208 >gi|312142894|ref|YP_003994340.1| polar amino acid ABC transporter, inner membrane subunit [Halanaerobium sp. 'sapolanicus'] gi|311903545|gb|ADQ13986.1| polar amino acid ABC transporter, inner membrane subunit [Halanaerobium sp. 'sapolanicus'] Length = 220 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/221 (33%), Positives = 126/221 (57%), Gaps = 4/221 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++ +D +P +L+ + VT+ I IS I+G F+++ +I+ + +IS + ++ + R Sbjct: 3 DIFLDFYP-VLFRGLGVTIMITLISCTSGTILGIFLSLGKIY-GNKLISRTVTAFIAVIR 60 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQLF+I+YGLP GI F A +IS +N AY +E +R SI S+ GQ A+ Sbjct: 61 GTPLLVQLFIIYYGLPAYGIRFAPITAAVISFIINSGAYQAEYLRGSIQSVSSGQLKAAL 120 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+T+ I +++LPQ + ++EFI ++K +S+A I E+ + I S Y Sbjct: 121 SLGMTKWMGIIYVVLPQALRRVIPAWTNEFIYMIKYSSLAYVIGAKELMTEGKLIASRNY 180 Query: 187 QPLIIYCELAFVYL-ILTSFCYIIQIKIESSVTQHTYSVDK 226 Q +Y +A +YL ++ F Y+ K E V + ++ Sbjct: 181 QFFNVYMVVALIYLVVIIIFVYLFN-KFEKKVAIPGFDFER 220 >gi|327460181|gb|EGF06518.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1057] Length = 729 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 118/210 (56%), Gaps = 8/210 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L + VT+ +A ISF I++IIG + + + I +V + RG PL++ Sbjct: 520 QELLKGLGVTIALALISFAIAMIIGIIFGMFSVSPYKPL-RWIAEIFVDVIRGIPLMIVA 578 Query: 75 FVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 IF+G+P++ ++FVA I+L+LN AYI+EI+R I ++P GQ +AS + Sbjct: 579 AFIFWGIPNLIESMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRS 638 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ +T+R IILPQ ++F+ LK T++ S I + E+F+T + I++ YQ Sbjct: 639 LGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQ 698 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +Y LA +YLI+ + + ++E + Sbjct: 699 SFRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|46199112|ref|YP_004779.1| amino acid ABC transporter, permease protein [Thermus thermophilus HB27] gi|55981139|ref|YP_144436.1| amino acid ABC transporter permease [Thermus thermophilus HB8] gi|46196736|gb|AAS81152.1| amino acid ABC transporter, permease protein [Thermus thermophilus HB27] gi|55772552|dbj|BAD70993.1| amino acid ABC transporter, permease protein [Thermus thermophilus HB8] Length = 261 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 109/185 (58%), Gaps = 9/185 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + +S L+IG F + R+ + + L FY+W+ RGTPLLVQ+ + LP Sbjct: 55 VTLKLTLLSGAAGLVIGVFAGMARLS-ARAWVRLPAAFYIWVIRGTPLLVQILFAYNALP 113 Query: 83 HIGI--------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 + + A I+L N AY +E++R+ I +IPKGQW+A++++G + Sbjct: 114 LLLQPLWPGAQQALTPYWAAFIALAFNVGAYNAEVVRAGIQAIPKGQWEAAWSLGFSAAD 173 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 T+R +ILPQ + PL + +++LK +S+AS IT+ E+ + QRI+S T++P+ +Y Sbjct: 174 TMRFVILPQALRIVVPPLVNNVVALLKDSSLASVITLLELALSGQRIISATFRPVEVYLA 233 Query: 195 LAFVY 199 +A VY Sbjct: 234 VAAVY 238 >gi|254975773|ref|ZP_05272245.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-66c26] gi|255314902|ref|ZP_05356485.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-76w55] gi|255517576|ref|ZP_05385252.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-97b34] gi|255650687|ref|ZP_05397589.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-37x79] gi|260683774|ref|YP_003215059.1| putative amino-acid ABC transporter permease [Clostridium difficile CD196] gi|260687434|ref|YP_003218568.1| putative amino-acid ABC transporter permease [Clostridium difficile R20291] gi|306520612|ref|ZP_07406959.1| putative amino-acid ABC transporter, permease protein [Clostridium difficile QCD-32g58] gi|260209937|emb|CBA63909.1| probable amino-acid ABC transporter, permease protein [Clostridium difficile CD196] gi|260213451|emb|CBE05127.1| probable amino-acid ABC transporter, permease protein [Clostridium difficile R20291] Length = 220 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/225 (34%), Positives = 128/225 (56%), Gaps = 14/225 (6%) Query: 1 MKY--EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 MKY E F +I+ SF VT+ +A S V SLIIG +A + ++ +++ I Sbjct: 5 MKYFLELFPIIMKSFN--------VTVILAISSLVFSLIIGTIVA-LSSYYKVKVLNQIC 55 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSII 115 YV IFRGTPL+ QLF +++GL ++ D A I L+LN AY+SE IR+SI+ Sbjct: 56 KVYVSIFRGTPLMPQLFFLYFGLAYMNDFVKNMDPVFATSIVLSLNMGAYMSETIRASIL 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SI KGQ +A+Y +GLT QT++ I++PQ + + L + FI ++K +SVA + + +I Sbjct: 116 SIDKGQIEAAYVMGLTNLQTMKRIVIPQAVRVALPSLFNNFIDLIKGSSVAFVVGVNDIM 175 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 A+ + +++ +Y + +Y + + Q K+E ++ + Sbjct: 176 GAAKSQGALSFKFFEVYGAVMVIYWCIITPLGWGQKKLEKKISNY 220 >gi|309390079|gb|ADO77959.1| amino acid ABC transporter membrane protein 2, PAAT family [Halanaerobium praevalens DSM 2228] Length = 214 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 118/210 (56%), Gaps = 1/210 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I+ + L + VT+ + IS I+G +A+ +I+ + +IS ++ ++ I RGT Sbjct: 4 ILSEYYPLFLRGLGVTVFVTIISCFSGTILGSLLALGKIY-GNKVISTLVRIFISIIRGT 62 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLLVQLF+I+YGLP GI A +IS +N Y +E +R SI SI Q A+ +I Sbjct: 63 PLLVQLFIIYYGLPSYGIRLAPLTAAVISFIINSGVYQAEYLRGSIQSISGSQLKAAQSI 122 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+T+ Q IR+IILPQ + ++EFI ++K +S+A I E+ A+ + S YQ Sbjct: 123 GMTKWQGIRYIILPQALRRVIPAWTNEFIYMIKYSSLAYVIGAKELMTEAKLLASRNYQF 182 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVT 218 +Y +A +YL + F + ++E VT Sbjct: 183 FNVYFLVALIYLAVIMFFVYLFNRLEKKVT 212 >gi|260430199|ref|ZP_05784173.1| ABC transporter permease protein [Citreicella sp. SE45] gi|260418671|gb|EEX11927.1| ABC transporter permease protein [Citreicella sp. SE45] Length = 221 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 115/200 (57%), Gaps = 7/200 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFYVW 63 F+++ D++ LL + VT+ I S VI L+ GF +A R+ I SL+ YV Sbjct: 7 FSIVTDNWIVLL-RGLWVTIQIWIPSIVIGLMGGFLLAQARLARRGWIRGTSLV---YVE 62 Query: 64 IFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +FR TP+L+QL +Y P +G+ + A ++ LTLN SAY SEI R I SI +GQ Sbjct: 63 LFRDTPVLIQLIWFYYAFPILVGVQLSPYAAALLGLTLNTSAYASEIFRGGIRSIHRGQM 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + AIG++R Q +R +ILPQ I ++ I + K +S+AS I++ E+ + + Sbjct: 123 EGALAIGMSRAQAMRRVILPQVIKRMLAAFTNRTIEVAKMSSLASVISVHELMYQGRLLS 182 Query: 183 STTYQPLIIYCELAFVYLIL 202 ST Y+P I +AF+Y +L Sbjct: 183 STYYRPFEILTAVAFIYFVL 202 >gi|148253605|ref|YP_001238190.1| ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146405778|gb|ABQ34284.1| amino acid ABC transporter membrane protein, PAAT family [Bradyrhizobium sp. BTAi1] Length = 285 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 117/208 (56%), Gaps = 14/208 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 IV T+ +A + + + +G +A++R+ + ++ + Y W+FRGTPL++QL + F Sbjct: 67 GIVNTMIMAVAAMALGIALGVVVAIMRLS-PNPVLRSVAAGYTWLFRGTPLILQLLLWFN 125 Query: 80 ---GLPHIGI----------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P IGI V F+A ++ L +N AY SE++R+ ++S+ GQ++A+ Sbjct: 126 LALVFPTIGIPGLWSARAVDVMTPFLAALLGLGINQGAYTSEVMRAGLLSVDIGQYEAAQ 185 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 AIG+ R Q +R IILPQ + PL +EFI ++K+TS+AS I PE+ +A+ I Sbjct: 186 AIGMGRLQALRRIILPQAMRVVIPPLGNEFIGLVKATSLASVIQYPEVLHSAENIYYANS 245 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIE 214 + + + YL++ S +Q+ +E Sbjct: 246 RVIELLIVAGLWYLLVVSILTPLQMLLE 273 >gi|187919665|ref|YP_001888696.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187718103|gb|ACD19326.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 218 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 116/201 (57%), Gaps = 7/201 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ I+FV I+G + +R+ + I+ YV +F+GTPLL+QLF+ F+GLP Sbjct: 20 TVLLSLIAFVGGGIVGLILLAMRVS-PIAWLRRIVVVYVEVFQGTPLLMQLFLAFFGLPL 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ +VA ++LTL SAY+ +I R + ++P+GQW A ++G+T Q +R+I+ PQ Sbjct: 79 LGVDVSPWVAATVTLTLYTSAYLVDIWRGCVEAVPRGQWSAGASLGMTFGQQLRYIVWPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI-- 201 + P + ++KST++AS I E+ +T I + ++P IY +A +Y Sbjct: 139 ARKIAVAPTVGFLVQVVKSTALASIIGFTELTKTGTMITNAAFRPFPIYGMVAMIYFAMC 198 Query: 202 --LTSFCYIIQIKIESSVTQH 220 LT + +++ + V QH Sbjct: 199 FPLTWYARVLEKR--QKVGQH 217 >gi|206967971|ref|ZP_03228927.1| amino acid ABC transporter, permease protein [Bacillus cereus AH1134] gi|228951133|ref|ZP_04113249.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229068327|ref|ZP_04201630.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus F65185] gi|229077955|ref|ZP_04210564.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock4-2] gi|229177167|ref|ZP_04304556.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus 172560W] gi|206736891|gb|EDZ54038.1| amino acid ABC transporter, permease protein [Bacillus cereus AH1134] gi|228606348|gb|EEK63780.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus 172560W] gi|228705293|gb|EEL57670.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock4-2] gi|228714788|gb|EEL66660.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus F65185] gi|228808543|gb|EEM55046.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 214 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 66/163 (40%), Positives = 103/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A I+ V+S IIG I ++R + ++S I+ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVIGILR-YTKIPVVSQILGVIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|322412041|gb|EFY02949.1| glutamine-binding protein / glutamine transport system permease protein glnP [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 725 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 69/214 (32%), Positives = 123/214 (57%), Gaps = 9/214 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ +++ QL +A + TL + ISF I++IIG ++ + + ++ I +V + RG Sbjct: 510 LLSNNYKQL-WAGLGTTLSLTLISFAIAMIIGIIFGMMAVSPTKSL-RHISTIFVDVVRG 567 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ IF+G+P++ + F+A I+L+LN AYI+EI+R I ++P G Sbjct: 568 IPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGGAYIAEIVRGGIEAVPAG 627 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++GL T+R +ILPQ + ++F+ LK T++ S I + E+FQT + Sbjct: 628 QMEASRSLGLPYATTMRKVILPQAVKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKI 687 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I++ YQ +Y LA +YLI+ + + ++E Sbjct: 688 IIARNYQSFRMYAILAIIYLIMITLLTRLAKRLE 721 >gi|300172941|ref|YP_003772107.1| polar amino acid ABC transporter permease [Leuconostoc gasicomitatum LMG 18811] gi|299887320|emb|CBL91288.1| Polar amino acid ABC transporter, permease protein [Leuconostoc gasicomitatum LMG 18811] Length = 213 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 100/165 (60%), Gaps = 1/165 (0%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 I +++ Y+WI RGTPLL+QL ++YGL +GI F F A II+ +N++AY++EI R Sbjct: 47 IRWLINGYIWIMRGTPLLLQLIFVYYGLGMMGISFPRFEAAIIAFIINYAAYLAEIFRGG 106 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + S+P+GQ+DA+ +G T+ QT I+LPQ I +E I+++K TS+ I + + Sbjct: 107 LQSVPRGQYDAAKVLGFTKIQTFFKIVLPQVIKIVVPSFGNEVINLVKDTSLVYVIGLGD 166 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 I + A I ++ LI Y + +YLI+T+ ++ + E + Sbjct: 167 ILR-AGNIAASRDVTLIPYLLVGLIYLIMTAIVTVLLRRTEKRLN 210 >gi|317053832|ref|YP_004117857.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316951827|gb|ADU71301.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 214 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/182 (34%), Positives = 107/182 (58%), Gaps = 1/182 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL ++ + S ++G AV+R + I Y +FRGTP+L+ L I++ Sbjct: 15 GLGITLLLSVAAIAGSTLLGLLAAVLRTS-RLPVARQIAVLYTELFRGTPVLITLMFIYF 73 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G+ + G + F A I+ L++ AYI+E+ R+ I ++PKGQW+ S+ +GL+++QT + Sbjct: 74 GVAYFGYEINLFAAGILGLSIYQGAYIAEVFRAGIEAVPKGQWEVSWILGLSKRQTFLSV 133 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQT PL +++S++K TS+ S I + E+ Q IV QP++IY +A +Y Sbjct: 134 ILPQTRGIVLPPLVGQYLSLIKDTSIVSMIGMSELMHQGQAIVDRIGQPVVIYGLVAVLY 193 Query: 200 LI 201 + Sbjct: 194 FV 195 >gi|302531216|ref|ZP_07283558.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. AA4] gi|302440111|gb|EFL11927.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. AA4] Length = 319 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 23/229 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + TL + IS +I ++ G +AV+R+ + ++S Y+W+FRGTPL+ Sbjct: 63 FDNRILNGLRNTLVLTVISMIIGIVGGVLLAVMRLS-PNLLMSGAASVYIWLFRGTPLIT 121 Query: 73 QLFV-----IFYGLPHIGIVF-------------DSFVAIIISLTLNFSAYISEIIRSSI 114 QL + + Y +GI F + FVA ++ L LN +AY++EI+R I Sbjct: 122 QLVIWNFLALAYSKIGLGIPFGPTFISWDTNTLINQFVASLLGLGLNEAAYMAEIVRGGI 181 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+ GQ +A+ A+G++R +T+R IILPQ + P +E IS+LK+TS+ I E+ Sbjct: 182 QSVDSGQLEAASALGMSRGKTLRRIILPQAMRVIIPPTGNETISMLKTTSLVVVIGYFEL 241 Query: 175 FQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 F +AQ I S Y+ PL+I A YL +TS ++Q IE + T Sbjct: 242 FVSAQTIYSQNYKTVPLLIVA--ATWYLFMTSVLTVVQFYIERYFARGT 288 >gi|317054240|ref|YP_004118265.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316952235|gb|ADU71709.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 241 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 55/158 (34%), Positives = 95/158 (60%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FY+W+FRGTP+L Q+ ++ LP G+ F +F +++L+LN AY++EI+RS + ++ Sbjct: 57 FYLWLFRGTPVLFQIIFVYNVLPGFGLRFSAFTCAVLALSLNEGAYMAEILRSGLQAVKS 116 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ A A+G+T Q +R I+LPQ P+ ++ IS+LKS+++ S I + E+ A Sbjct: 117 GQRTAGMALGMTNAQIMRKIVLPQAARIVLPPMGNQMISMLKSSALVSVIAVQELLLVAN 176 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + S +++ C YL+LT+ I Q +E ++ Sbjct: 177 QTASASFRYFEALCAAGIYYLLLTTLFMIFQSWLERTL 214 >gi|134300076|ref|YP_001113572.1| polar amino acid ABC transporter, inner membrane subunit [Desulfotomaculum reducens MI-1] gi|134052776|gb|ABO50747.1| amino acid ABC transporter membrane protein, PAAT family [Desulfotomaculum reducens MI-1] Length = 255 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/213 (33%), Positives = 115/213 (53%), Gaps = 10/213 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF---------FSD 51 M +EW II + + VTL I+ I ++ IIG + +IR + Sbjct: 1 MTFEWIVKIISDYGPMFIRGAGVTLLISIIGTIVGFIIGLLVGIIRTIPMPERGGKRVTI 60 Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEII 110 II+ I+ Y+ FRGTP++VQ VI+YG G+ + VA I +++N AY+SEI+ Sbjct: 61 KIINAILSAYIEFFRGTPMIVQAMVIYYGSALAFGVDMNRLVAAIFIVSINTGAYMSEIV 120 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R IISI KGQ++A++AIG+ QT+ ++I+PQ I +EFI +K TSV + I+ Sbjct: 121 RGGIISIDKGQFEAAHAIGMNHVQTMFNVIIPQVIRNILPATGNEFIINIKDTSVLNVIS 180 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + E+F + + ++ + +Y I+T Sbjct: 181 VTELFFQTKSVAGNNFRYFESFFVACIIYFIMT 213 >gi|312864828|ref|ZP_07725059.1| putative arginine ABC transporter, permease protein ArtQ [Streptococcus downei F0415] gi|311099955|gb|EFQ58168.1| putative arginine ABC transporter, permease protein ArtQ [Streptococcus downei F0415] Length = 213 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 63/172 (36%), Positives = 110/172 (63%), Gaps = 4/172 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRG 67 +++ P LL ++VTL + CI ++S+ +G +A +++I F ++ ++ YVWI RG Sbjct: 4 VLEILPALL-NGVLVTLEVFCIVIILSIPLGIVLAFLMQIKFKP--LNWLLTIYVWIMRG 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL +Y LP +GIVFD A I++ TLN++AY +EI R I +IPKGQ++A+ Sbjct: 61 TPLLLQLIFFYYVLPSVGIVFDRLPAAILAFTLNYAAYFAEIFRGGIDAIPKGQYEAAKV 120 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 + + QTIR+IILPQ + + +E I+++K +S+ + + ++ ++ Sbjct: 121 LKFNQIQTIRYIILPQVVKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLESR 172 >gi|323142442|ref|ZP_08077263.1| ABC transporter, permease protein [Phascolarctobacterium sp. YIT 12067] gi|322413087|gb|EFY03985.1| ABC transporter, permease protein [Phascolarctobacterium sp. YIT 12067] Length = 214 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 130/216 (60%), Gaps = 7/216 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + +++ PQ++ +V + + I+ V+S+ +G +++ R+ + +LI YVWI R Sbjct: 2 DYVLNIIPQMMDGCLV-SFQVFIITIVLSIPLGILLSLGRVSGIKPLQALIGG-YVWILR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G+PL++Q+F +++ LP +GI F + I++ LN++AY EI R+ I +IP GQ++A++ Sbjct: 60 GSPLMLQIFFVYFVLPSVGIRLPDFESAIVAFVLNYAAYFCEIFRAGIQAIPAGQYEAAH 119 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +G+ QT+R IILPQ I P+S+E I+++K TS+ + + ++ +TA+ +V + Sbjct: 120 TLGMNYVQTMRRIILPQVIRIILPPISNETITLVKDTSLVYVLAMNDLMRTARNLVQRDF 179 Query: 187 Q--PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P I+ A YL+ T ++ ++E +++ Sbjct: 180 SITPFIV---AAVFYLLATLILTLVFERLEKRFSRY 212 >gi|313900722|ref|ZP_07834215.1| putative arginine ABC transporter, permease protein ArtQ [Clostridium sp. HGF2] gi|312954784|gb|EFR36459.1| putative arginine ABC transporter, permease protein ArtQ [Clostridium sp. HGF2] Length = 213 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 68/197 (34%), Positives = 117/197 (59%), Gaps = 5/197 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---DTIISLIMHFYVWIFR 66 +D F QLL A V L I +V++L+ F +A+ ++ + ++S I+ FY++I R Sbjct: 1 MDFFIQLL-PAFVEGLKITLFFWVVTLVGSFVLALPMVYVRLSRNAVVSTIVRFYIYIMR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL +++GLP++GI D A I++ LN++AY +EI+R I SI +GQ +A+ Sbjct: 60 GTPLLLQLMFVYFGLPYLGIRLDRTTAAILAFLLNYTAYFTEILRGGIQSIDEGQKEAAK 119 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +G + T HI+LPQ + +E +++LK T + S + I E+ + A +I + TY Sbjct: 120 LLGYSNSYTFLHILLPQALRNCIPSFINESLTLLKDTCLVSILGIDELLRYA-KIAAGTY 178 Query: 187 QPLIIYCELAFVYLILT 203 + + + +YL+L Sbjct: 179 ATGLPFIYVGVIYLVLN 195 >gi|134046500|ref|YP_001097985.1| polar amino acid ABC transporter inner membrane subunit [Methanococcus maripaludis C5] gi|132664125|gb|ABO35771.1| amino acid ABC transporter membrane protein, PAAT family [Methanococcus maripaludis C5] Length = 226 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/198 (36%), Positives = 117/198 (59%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 L I PQL+ +I+ T+ I S +I L +G + + RI + + + I FY+ Sbjct: 11 LELFIKIIPQLIDGSIL-TIKITVFSIIIGLFLGTILGMGRISY-NIVYRYISSFYIEFV 68 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQ+ +I++GLP GI ++ A I++L LN AY+ EII++ I+S+ GQ +A+ Sbjct: 69 RGTPLLVQIMIIYFGLPSFGINLSAYTAGILALGLNSGAYVGEIIKAGILSVHVGQMEAA 128 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ Q +R+IILPQ + +EFI +LK +S+ S I I E+ + ++I S+T Sbjct: 129 RSLGMNYAQAMRYIILPQAFRNVLPAIGNEFILLLKDSSLLSVIAIVELTRVGKQIYSST 188 Query: 186 YQPLIIYCELAFVYLILT 203 Y +A YLI+T Sbjct: 189 YNAWTPLLGVALFYLIMT 206 >gi|291286086|ref|YP_003502902.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Denitrovibrio acetiphilus DSM 12809] gi|290883246|gb|ADD66946.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Denitrovibrio acetiphilus DSM 12809] Length = 225 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 121/205 (59%), Gaps = 5/205 (2%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI-RIFFSDTIISLIM 58 M ++W + + D P+L+ A T+ AC ++I++++G A+ R F ++S+++ Sbjct: 1 MSFDWKWGFVWDILPRLI-EATGNTVMAACFGYLIAIVLGLMFALGQRTRFK--VLSVVL 57 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 V R TPL++Q+F +FY P +G++ + A +I++ L++ AY+SE+ R+ I S+P Sbjct: 58 RETVEFIRSTPLVLQIFFVFYVGPQVGVMLSPWTAGMIAIGLHYGAYLSEVYRAGIESVP 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQW+A+ ++ L+R +T +ILPQ + + + + + I K T + S I + E+ TA Sbjct: 118 KGQWEAAVSLSLSRVRTYTRVILPQAVPPAFAGMGNYLVGIFKDTPMLSVIGVAELMHTA 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT 203 I S Y+ L Y + ++L+++ Sbjct: 178 NSIGSENYRYLEPYTLVGVIFLLIS 202 >gi|210623568|ref|ZP_03293894.1| hypothetical protein CLOHIR_01844 [Clostridium hiranonis DSM 13275] gi|210153438|gb|EEA84444.1| hypothetical protein CLOHIR_01844 [Clostridium hiranonis DSM 13275] Length = 223 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 112/189 (59%), Gaps = 8/189 (4%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 + T+ I+ I+ IIG + + ++ + I + Y+ + R TPLLVQL +I+YGL Sbjct: 18 LTTIEISFIALFFGFIIGLILCLAKMS-KNGIFKALSTIYIEVIRDTPLLVQLSIIYYGL 76 Query: 82 PHIGIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 P IGI F S F+A +L++N AY++EI+RS I S+ KGQ +AS ++GL+ Sbjct: 77 PQIGINFPSLFGIPSDFIAGAFALSINSGAYVAEIMRSGIQSVDKGQMEASRSLGLSYWA 136 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 T+RH+I+PQ + L++EF+S++K +++ S I + +I TA + + TY Y Sbjct: 137 TMRHVIVPQAVKNILPSLANEFVSLVKESAILSFIGVIDIMFTANTVKNATYDSFGPYLF 196 Query: 195 LAFVYLILT 203 A +Y +LT Sbjct: 197 AAAIYFVLT 205 >gi|169349946|ref|ZP_02866884.1| hypothetical protein CLOSPI_00686 [Clostridium spiroforme DSM 1552] gi|169293159|gb|EDS75292.1| hypothetical protein CLOSPI_00686 [Clostridium spiroforme DSM 1552] Length = 227 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 118/209 (56%), Gaps = 8/209 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + +L IA +S +I + G A +I ++ I+ I + YV + RGTP+L+Q+ + Sbjct: 17 LLKGAMTSLGIAALSLLIGFVFGVLGASAKIS-NNKILRAIANVYVEVIRGTPMLLQIMI 75 Query: 77 IFYGLPHI-----GIVF--DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 IF +P I G VF + ++ ++++++N AY +E+IRS I + KGQW+A +G Sbjct: 76 IFNVVPIIITEITGNVFRMNYYLIGVVAMSINSGAYTTELIRSGINGVDKGQWEACQTLG 135 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+R QT+R +ILPQ PL SEFI+++K +S+ S I E+ +A+ I + Y+ + Sbjct: 136 LSRWQTMRFVILPQAFKRIVPPLVSEFITLIKDSSLISVIGAVELMNSAKVIGNQYYEFM 195 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVT 218 YC YL +T I KIE + Sbjct: 196 SPYCLAGLYYLAMTLTISYIAKKIERKLA 224 >gi|50914605|ref|YP_060577.1| arginine ABC transporter permease [Streptococcus pyogenes MGAS10394] gi|50903679|gb|AAT87394.1| Arginine transport system permease protein [Streptococcus pyogenes MGAS10394] Length = 228 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/176 (35%), Positives = 106/176 (60%), Gaps = 10/176 (5%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIF-----YGLPHIGIV-----FDSFVAIIISLTLNFS 103 ++ +++ YVWIFRGTP++VQ+ + F +P IG F + II ++LN Sbjct: 49 LTWVVNLYVWIFRGTPMVVQIMIAFAWMHFNNMPTIGFGVLDFDFSRLLPGIIIISLNSG 108 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AYISEI+R+ I ++PKGQ +A+Y++G+ + +R++ILPQ L +EFI+I+K + Sbjct: 109 AYISEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPALGNEFITIIKDS 168 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 ++ TI + E++ AQ +V+ TY P+ AF YL++T+ + +E + Q Sbjct: 169 ALLQTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMVTTVMAQLLAVLERHMAQ 224 >gi|326797152|ref|YP_004314972.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas mediterranea MMB-1] gi|326547916|gb|ADZ93136.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas mediterranea MMB-1] Length = 315 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 64/192 (33%), Positives = 124/192 (64%), Gaps = 7/192 (3%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ I+ IS + S+I+G ++RI + +L + YV + RGTPLLVQ+F++++ Sbjct: 119 VTIKISFISLIFSIILGLIFGLMRISHRQVLRNLAVT-YVEVIRGTPLLVQIFIVYF--- 174 Query: 83 HIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 IG VFD F A + +L++ AY++EI+R+ I ++P GQ +A+ ++G+ Q + +++ Sbjct: 175 FIGTVFDLDRFTAGVAALSIFTGAYVAEIVRAGIQAVPTGQMEAARSLGMNYVQAMCYVV 234 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 +PQ I + PL+ +FI+++K +S+ S I+I ++ + + +VS ++ P ++ +A +YL Sbjct: 235 MPQAIKRTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSGSFAPFEVWFTVAALYL 294 Query: 201 ILT-SFCYIIQI 211 ++T + + IQI Sbjct: 295 VVTGALSWAIQI 306 >gi|167033586|ref|YP_001668817.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166860074|gb|ABY98481.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 321 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 66/196 (33%), Positives = 115/196 (58%), Gaps = 1/196 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + T+ ++ +S I+ ++ A R+ + I+ I FY FRG PLL+Q+++I+ Sbjct: 120 GVFTTVYVSTLSIAIAFVLALLGATARLSSNGFAIA-IASFYTSFFRGVPLLIQIYLIYL 178 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G+P +G V + A I++L+L + AY++EI R+ I SIP+GQW+AS AIGLT Q + + Sbjct: 179 GIPQLGYVVGAVPAGILALSLCYGAYMTEIFRAGISSIPRGQWEASRAIGLTPFQAMTRV 238 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ++ P ++FIS+LK +S+ S I + E+ A+ ++ L + A +Y Sbjct: 239 ILPQSMRLIIPPTGNQFISMLKDSSLVSVIGVWELMFLARTQGRAEFRHLEMLITAAVLY 298 Query: 200 LILTSFCYIIQIKIES 215 +L+ +Q ++E Sbjct: 299 WVLSILLEAVQSRLEK 314 >gi|257870618|ref|ZP_05650271.1| amino acid ABC transporter [Enterococcus gallinarum EG2] gi|257804782|gb|EEV33604.1| amino acid ABC transporter [Enterococcus gallinarum EG2] Length = 528 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 113/208 (54%), Gaps = 10/208 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISL 56 F IID + L +TL IA +S V+ L+IG + V R F +I+ Sbjct: 292 FKKIIDDYGSLFLRGAGLTLFIAIVSTVVGLLIGLLVGVFRTLPAAENPVSRFFQKLINA 351 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 ++ Y+ +FRGTP++VQ VIFYG G+ + +A ++ +++N AY+SEI+R I Sbjct: 352 LLTIYIEVFRGTPMMVQAMVIFYGTALAFGVSMNRTIAALLIVSINTGAYMSEIVRGGIF 411 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ GQ++A+ AIG+T QT+ ++LPQ + +E I +K T+V S I++ ++F Sbjct: 412 AVDDGQFEAAQAIGMTHWQTMFKVVLPQVMRNILPATGNEIIINIKDTAVLSVISVADLF 471 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 T YQ + + +YL+LT Sbjct: 472 FQGTSAAGTNYQYFQTFAIIGAIYLVLT 499 >gi|228957063|ref|ZP_04118837.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802623|gb|EEM49466.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pakistani str. T13001] Length = 214 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 103/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A I+ V+S IIG I ++R + ++S ++ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVIGILR-YTKIPVVSQVLGIIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|77456604|ref|YP_346109.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77380607|gb|ABA72120.1| amino acid ABC transporter membrane protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 319 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 123/199 (61%), Gaps = 8/199 (4%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ +S V+ L+IG + R+ + T+ L YV + RGTPLLVQ+F+ ++ Sbjct: 124 TLWLSVVSGVLGLLIGLATGLCRLSSNPTLRDLST-IYVELVRGTPLLVQIFIFYF---F 179 Query: 84 IGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IG V + A I +L+L AY++EIIRS + SI +GQ +A+ ++GL+ Q++RH++L Sbjct: 180 IGTVMNLSREFAGIAALSLFTGAYVAEIIRSGVQSIARGQNEAARSLGLSAGQSMRHVVL 239 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL-IIYCELAFVYL 200 PQ PL+ +FIS++K TS+ S I I E+ ++ + +++T++ P I++C +A +YL Sbjct: 240 PQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFC-VAGLYL 298 Query: 201 ILTSFCYIIQIKIESSVTQ 219 ++ I ++E + Q Sbjct: 299 LINLPLSKIASRLERRLAQ 317 >gi|110803729|ref|YP_698645.1| glutamine ABC transporter permease [Clostridium perfringens SM101] gi|110684230|gb|ABG87600.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens SM101] Length = 213 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 66/173 (38%), Positives = 108/173 (62%), Gaps = 2/173 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N II P ++ + TL + ++ ++S+ +G +A++R+ + I++ I YV + R Sbjct: 2 NYIITLMPSII-EGLKNTLGVFILTLLLSIPLGMIVAILRLS-NIKIVNFISSLYVLVMR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL IF+GLP IGI D F A II+ TLN++AY EI RS I I KGQ++AS Sbjct: 60 GTPLLLQLIFIFFGLPIIGISIDRFPAAIIAFTLNYAAYFGEIFRSGIKDIDKGQFEASK 119 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +GL++ T + IILPQ+ + +++E I+++K TS+ + I E+ + + Sbjct: 120 ILGLSKWFTFKKIILPQSFKKTLPSITNEVITLVKDTSLVYVVGIGELLRAGK 172 >gi|315036620|gb|EFT48552.1| ABC transporter, permease protein [Enterococcus faecalis TX0027] Length = 546 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 12/209 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----------FFSDTIIS 55 F I + + + +TL IA I V+ +G I V R FF + + Sbjct: 306 FKNIWNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQ-KLGN 364 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 LI+ Y+ +FRGTP++VQ VIFYGL GI D VA + +++N AY+SEI+R I Sbjct: 365 LILSIYIEVFRGTPMMVQAMVIFYGLALAFGISLDRTVAALFIVSVNTGAYMSEIVRGGI 424 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ KGQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++ Sbjct: 425 FAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADL 484 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 F +Q + + +YL++T Sbjct: 485 FFQGNAASGANFQFFQTFTIVGIMYLVMT 513 >gi|330965816|gb|EGH66076.1| amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 217 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/187 (33%), Positives = 108/187 (57%), Gaps = 1/187 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ ++VT+ + + F++++++G +A + + T++ + Y+ FR TPL+VQL+V Sbjct: 16 LFQGLLVTVQVVFLGFLLAVVLGLILA-LALRSHMTLVHRLSKGYLSFFRNTPLMVQLYV 74 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +F+ +P GI F + +I L ++AYI E R +I IP GQW+A+ A+ T Sbjct: 75 LFFAMPMAGITFLAITTGVIGLGCYYAAYIGEAYRGAIDDIPAGQWEAARALDFNSGDTW 134 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 R IILPQ + L + I + K T + + ITIPE+FQ A++I TY+ Y +A Sbjct: 135 RRIILPQALKPMLPVLGNYLIGMFKETPLLAVITIPELFQAAKQIAGMTYRYNEPYTVMA 194 Query: 197 FVYLILT 203 ++L ++ Sbjct: 195 LMFLAIS 201 >gi|172057735|ref|YP_001814195.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sibiricum 255-15] gi|171990256|gb|ACB61178.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sibiricum 255-15] Length = 228 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 56/139 (40%), Positives = 94/139 (67%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ RG P+LV LF+ ++GLP I I D+ A I +LN +AY++EIIRSS++S+ +G Sbjct: 68 YISFMRGVPILVLLFMFYFGLPVINIQLDALTAAIAGFSLNSAAYMAEIIRSSLLSVDRG 127 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++GL+R + IILPQ + + PLS+ + ++K++S+A+ IT+PEIFQ A+ Sbjct: 128 QQEAAQSLGLSRYRVFVGIILPQAVRLAIPPLSNVLLDLVKASSLAAMITVPEIFQRAKI 187 Query: 181 IVSTTYQPLIIYCELAFVY 199 + + + +Y +AF+Y Sbjct: 188 VGGREFDYMTVYFVIAFIY 206 >gi|300693430|ref|YP_003749403.1| amino acid transmembrane ABC transporter protein [Ralstonia solanacearum PSI07] gi|299075467|emb|CBJ34761.1| putative amino acid transmembrane ABC transporter protein [Ralstonia solanacearum PSI07] Length = 262 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 90/147 (61%), Gaps = 2/147 (1%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 FY+W+ RGTPLLVQ+ +F LP + D F + ++L N AY +E IR+ ++++ Sbjct: 96 FYIWVIRGTPLLVQILFVFLALPAWLPWLQMDDFTSACVALAFNAGAYNAESIRAGLLAV 155 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKGQ +A++++GL+R T +I PQ + PL + FIS+LK +S+A I + E+ Sbjct: 156 PKGQLEAAHSLGLSRWHTFADVIFPQAFKVALPPLVNNFISLLKDSSLAYAIGVVELTNV 215 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTS 204 R+ + T+QPL A +YL+LT+ Sbjct: 216 GNRLQAATFQPLPALVTTAVIYLVLTT 242 >gi|260459412|ref|ZP_05807667.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259034966|gb|EEW36222.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 273 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 123/211 (58%), Gaps = 12/211 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VTL + IS V+ ++ +A R+ + I+S + + YV+ FRGTPLLVQ F+++Y Sbjct: 62 GLGVTLSLVAISMVLGAVLSMPVAYGRMS-RNRILSGLAYCYVYFFRGTPLLVQTFLVYY 120 Query: 80 GL----PHIGIVF------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 GL P + +V D+F + + +LN +AY +EI+R +I S+P+GQW+ + ++G Sbjct: 121 GLGSFRPELQMVGLWDFFKDAFNCGVFAFSLNTAAYQAEILRGAIESVPRGQWEGAASLG 180 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L + QT+R I+LPQ + + P +E I ++K++++ + IT+ ++ A+ + ++ + Sbjct: 181 LHKLQTLRKIVLPQALIVALRPYGNELILMVKASAIVAIITVYDLMGNAKLAFANSFD-I 239 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y +A VYL++ IE +T H Sbjct: 240 QAYIWVALVYLVMVELLRHGIEWIERRITIH 270 >gi|227555893|ref|ZP_03985940.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|312901081|ref|ZP_07760370.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|227175060|gb|EEI56032.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|311291827|gb|EFQ70383.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|315168140|gb|EFU12157.1| ABC transporter, permease protein [Enterococcus faecalis TX1341] gi|315573554|gb|EFU85745.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B] gi|315582098|gb|EFU94289.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A] Length = 546 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 12/209 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----------FFSDTIIS 55 F I + + + +TL IA I V+ +G I V R FF + + Sbjct: 306 FKNIWNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQ-KLGN 364 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 LI+ Y+ +FRGTP++VQ VIFYGL GI D VA + +++N AY+SEI+R I Sbjct: 365 LILSIYIEVFRGTPMMVQAMVIFYGLALAFGISLDRTVAALFIVSVNTGAYMSEIVRGGI 424 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ KGQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++ Sbjct: 425 FAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADL 484 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 F +Q + + +YL++T Sbjct: 485 FFQGNAASGANFQFFQTFTIVGIMYLVMT 513 >gi|126667886|ref|ZP_01738852.1| amino acid ABC transproter, permease protein [Marinobacter sp. ELB17] gi|126627702|gb|EAZ98333.1| amino acid ABC transproter, permease protein [Marinobacter sp. ELB17] Length = 224 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/167 (38%), Positives = 105/167 (62%), Gaps = 4/167 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL +A ++ V++LI+ AV+R+ + L + F + FRGTPLLVQLF+ +YGLP Sbjct: 22 LTLQLAGVAMVMALILACVFAVVRVLGIPVLNQLTIVF-ISFFRGTPLLVQLFLFYYGLP 80 Query: 83 H---IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + V D A I+ LTL+FSAY++E IR++II + + Q +A+ +IG+T Q +R I Sbjct: 81 QLFSVLTVIDGVTATIMGLTLHFSAYMAESIRAAIIGVDRSQTEAALSIGMTNSQLMRRI 140 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ILPQ + L + FI ++K+TS+A T+ + E+ Q+ S ++ Sbjct: 141 ILPQATRVALPTLMNYFIDMIKATSLAFTLGVTELMGATQKEASGSF 187 >gi|146305345|ref|YP_001185810.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina ymp] gi|145573546|gb|ABP83078.1| amino acid ABC transporter membrane protein 2, PAAT family [Pseudomonas mendocina ymp] Length = 215 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/186 (32%), Positives = 113/186 (60%), Gaps = 8/186 (4%) Query: 24 TLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 TL ++ ++FV I G + + R+ + I++ Y+ +F+GTPLL+QLF++F+G+ Sbjct: 19 TLLLSLVAFVCGGIAGLLVMLARLSPLAAPRILA---RGYIELFQGTPLLMQLFLVFFGI 75 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 +G+ ++A +LTL SA+++EI R + SI +GQW+AS ++ ++R +T+RH++L Sbjct: 76 ALLGVDVSPWLAAATALTLFTSAFLAEIWRGCVESIGRGQWEASESLAMSRLETLRHVVL 135 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ + + P + ++K T+V S I E+ +T + + T++P ++Y +A Y + Sbjct: 136 PQALRIAVAPTVGFSVQVIKGTAVTSIIGFTELTKTGSMLANATFEPFMVYGFVALGYFL 195 Query: 202 LTSFCY 207 L CY Sbjct: 196 L---CY 198 >gi|289522550|ref|ZP_06439404.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504386|gb|EFD25550.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 232 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 119/220 (54%), Gaps = 2/220 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++ I +F L+ + T +A ++ I+G +A+ R F + ++S + YV + R Sbjct: 12 DIFISNFGTLM-KGLAFTFELAIVAMFFGTILGVLLALGRSF-GNRLLSWLCTAYVELIR 69 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL QLF++++ LP GI + + LN +AY +E R SI ++ + Q+ A+Y Sbjct: 70 GTPLLAQLFILYFALPPYGIRLSAVSVAFLGFILNSAAYQAEYTRGSIEAVGEDQFKAAY 129 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+ + QTI +++LPQ I S +EFI +LK TS+A I P++ + I S Y Sbjct: 130 SLGMGKWQTIFYVVLPQAIRWSIPAWMNEFIYLLKCTSIAYIIGAPDLLTQGKFIASRNY 189 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 Q +Y +A +YL++ I KIE V + DK Sbjct: 190 QFFRVYLIVAIIYLVIVLAATWIVGKIEQKVQIPGFGYDK 229 >gi|317484847|ref|ZP_07943739.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] gi|316923893|gb|EFV45087.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] Length = 264 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/189 (34%), Positives = 111/189 (58%), Gaps = 2/189 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L +++T + +S + +L IG + R+ + +I+LI YV I RG PLLVQL Sbjct: 56 KFLPDGLIITFEVTVLSLLCTLPIGLLTGLGRLS-RNPVINLIASTYVEIIRGVPLLVQL 114 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F I+Y L I I V+ +I+++ + AY+ E+ R+ I+S+PKGQ +A+ ++G Q Sbjct: 115 FYIYYALGRI-IQVPPMVSAVIAISFCYGAYMGEVFRAGILSVPKGQTEAARSLGFNNFQ 173 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 T+ +ILPQ + T P+ +E I++LK TS+ S I + ++ + + S T+ Y Sbjct: 174 TMTLVILPQAMRTILPPIGNECIAMLKDTSLVSIIAVADLLRRGREFASQTFDYFETYTV 233 Query: 195 LAFVYLILT 203 +A VYLI+T Sbjct: 234 IALVYLIIT 242 >gi|256855202|ref|ZP_05560563.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|300862178|ref|ZP_07108258.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|256709715|gb|EEU24762.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|295112535|emb|CBL31172.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)/amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp. 7L76] gi|300848703|gb|EFK76460.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] Length = 527 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 12/209 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----------FFSDTIIS 55 F I + + + +TL IA I V+ +G I V R FF + + Sbjct: 287 FKNIWNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQ-KLGN 345 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 LI+ Y+ +FRGTP++VQ VIFYGL GI D VA + +++N AY+SEI+R I Sbjct: 346 LILSIYIEVFRGTPMMVQAMVIFYGLALAFGISLDRTVAALFIVSVNTGAYMSEIVRGGI 405 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ KGQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++ Sbjct: 406 FAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADL 465 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 F +Q + + +YL++T Sbjct: 466 FFQGNAASGANFQFFQTFTIVGIMYLVMT 494 >gi|255656163|ref|ZP_05401572.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-23m63] Length = 223 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/204 (36%), Positives = 120/204 (58%), Gaps = 14/204 (6%) Query: 1 MKY--EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 MKY E F +I+ SF VT+ +A S V SLIIG +A + ++ +++ I Sbjct: 5 MKYFLELFPIIMKSFN--------VTVILAISSLVFSLIIGTIVA-LSSYYKVKVLNQIC 55 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSII 115 YV IFRGTPL+ QLF +++GL ++ D A I L+LN AY+SE IR+SI+ Sbjct: 56 KVYVSIFRGTPLMPQLFFLYFGLAYMSDFVKNMDPVFATSIVLSLNMGAYMSETIRASIL 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SI KGQ +A+YA+GLT QT++ I++PQ + + L + FI ++K +SVA + + +I Sbjct: 116 SIDKGQIEAAYAMGLTNLQTMKRIVIPQAVRVALPSLFNNFIDLIKGSSVAFVVGVNDIM 175 Query: 176 QTAQRIVSTTYQPLIIYCELAFVY 199 A+ + +++ +Y + +Y Sbjct: 176 GAAKSQGALSFKFFEVYGAVMVIY 199 >gi|315160767|gb|EFU04784.1| ABC transporter, permease protein [Enterococcus faecalis TX0645] gi|315579366|gb|EFU91557.1| ABC transporter, permease protein [Enterococcus faecalis TX0630] Length = 546 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 12/209 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----------FFSDTIIS 55 F I + + + +TL IA I V+ +G I V R FF + + Sbjct: 306 FKNIWNQYGDMFLRGTGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQ-KLGN 364 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 LI+ Y+ +FRGTP++VQ VIFYGL GI D VA + +++N AY+SEI+R I Sbjct: 365 LILSIYIEVFRGTPMMVQAMVIFYGLALAFGISLDRTVAALFIVSVNTGAYMSEIVRGGI 424 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ KGQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++ Sbjct: 425 FAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADL 484 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 F +Q + + +YL++T Sbjct: 485 FFQGNAASGANFQFFQTFTIVGIMYLVMT 513 >gi|307278646|ref|ZP_07559716.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|306504706|gb|EFM73906.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] Length = 546 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 12/209 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----------FFSDTIIS 55 F I + + + +TL IA I V+ +G I V R FF + + Sbjct: 306 FKNIWNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQ-KLGN 364 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 LI+ Y+ +FRGTP++VQ VIFYGL GI D VA + +++N AY+SEI+R I Sbjct: 365 LILSIYIEVFRGTPMMVQAMVIFYGLALAFGISLDRTVAALFIVSVNTGAYMSEIVRGGI 424 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ KGQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++ Sbjct: 425 FAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADL 484 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 F +Q + + +YL++T Sbjct: 485 FFQGNAASGANFQFFQTFTIVGIMYLVMT 513 >gi|307274211|ref|ZP_07555419.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|307291685|ref|ZP_07571560.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|312904644|ref|ZP_07763799.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|306497304|gb|EFM66846.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|306509173|gb|EFM78235.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|310631996|gb|EFQ15279.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|315028836|gb|EFT40768.1| ABC transporter, permease protein [Enterococcus faecalis TX4000] gi|315145376|gb|EFT89392.1| ABC transporter, permease protein [Enterococcus faecalis TX2141] Length = 546 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 12/209 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----------FFSDTIIS 55 F I + + + +TL IA I V+ +G I V R FF + + Sbjct: 306 FKNIWNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQ-KLGN 364 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 LI+ Y+ +FRGTP++VQ VIFYGL GI D VA + +++N AY+SEI+R I Sbjct: 365 LILSIYIEVFRGTPMMVQAMVIFYGLALAFGISLDRTVAALFIVSVNTGAYMSEIVRGGI 424 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ KGQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++ Sbjct: 425 FAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADL 484 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 F +Q + + +YL++T Sbjct: 485 FFQGNAASGANFQFFQTFTIVGIMYLVMT 513 >gi|125718174|ref|YP_001035307.1| arginine/histidine ABC transporter permease [Streptococcus sanguinis SK36] gi|125498091|gb|ABN44757.1| Arginine/histidine ABC transporter, permease component, putative [Streptococcus sanguinis SK36] Length = 722 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 118/210 (56%), Gaps = 8/210 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L + VT+ +A ISF I+++IG + + + I +V + RG PL++ Sbjct: 513 QELLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPL-RWIAEIFVDVIRGIPLMIVA 571 Query: 75 FVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 IF+G+P++ ++FVA I+L+LN AYI+EI+R I ++P GQ +AS + Sbjct: 572 AFIFWGIPNLIESMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRS 631 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ +T+R IILPQ ++F+ LK T++ S I + E+F+T + I++ YQ Sbjct: 632 LGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQ 691 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +Y LA +YLI+ + + ++E + Sbjct: 692 SFRMYAILAVLYLIIITLLTRLAKRLEKRI 721 >gi|120609003|ref|YP_968681.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax citrulli AAC00-1] gi|120587467|gb|ABM30907.1| amino acid ABC transporter membrane protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 260 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/175 (34%), Positives = 101/175 (57%), Gaps = 3/175 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + +S + L++G A+ R T + FY+W+ RGTPLLVQ+ +++ LP Sbjct: 59 TLWLTLVSGLCGLVLGTGAALARTA-RWTPLRWAARFYIWVIRGTPLLVQILFVYFALPV 117 Query: 84 I--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + G+ F A +++L LN AY SE IR+ ++++P+GQ +A+ A+GL+R ++ Sbjct: 118 LVPGLNLPDFAAAVVALGLNVGAYNSEAIRAGLLAVPRGQTEAARALGLSRTHVFFDVVF 177 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 PQ S PL S F+++LK +S+A I + E+ RI S T+QP+ +A Sbjct: 178 PQAFKISLPPLVSNFVALLKDSSLAYAIGVVELTNVGNRIQSATFQPIATLSTVA 232 >gi|71903839|ref|YP_280642.1| arginine transport system permease protein [Streptococcus pyogenes MGAS6180] gi|71802934|gb|AAX72287.1| arginine transport system permease protein [Streptococcus pyogenes MGAS6180] Length = 228 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 62/176 (35%), Positives = 106/176 (60%), Gaps = 10/176 (5%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIF-----YGLPHIG-----IVFDSFVAIIISLTLNFS 103 ++ +++ YVWIFRGTP++VQ+ + F +P IG + F + II ++LN Sbjct: 49 LTWVVNLYVWIFRGTPMVVQIMIAFAWMHFNNMPTIGFGVLDLDFSRLLPGIIIISLNSG 108 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AYISEI+R+ I ++PKGQ +A+Y++G+ + +R++ILPQ L +EFI+I+K + Sbjct: 109 AYISEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPALGNEFITIIKDS 168 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + TI + E++ AQ +V+ TY P+ AF YL++T+ + +E + Q Sbjct: 169 AFLQTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMVTTVMAQLLAVLERHMAQ 224 >gi|330501278|ref|YP_004378147.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas mendocina NK-01] gi|328915564|gb|AEB56395.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina NK-01] Length = 215 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 112/184 (60%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ ++FV I G + + R+ + ++ Y+ +F+GTPLL+QLF++F+G+ Sbjct: 19 TLLLSLVAFVCGGIAGLLVLLARLS-PLSAPRILARGYIELFQGTPLLMQLFLVFFGIAL 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +GI ++A +LTL SA+++EI R + SI +GQW+AS ++ ++R +T+RH++LPQ Sbjct: 78 LGIDVSPWLAAATALTLFTSAFLAEIWRGCVESISRGQWEASESLAMSRLETLRHVVLPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T+V S I E+ +T + + T++P ++Y +A Y +L Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGSMLANATFEPFMVYGFVALGYFLL- 196 Query: 204 SFCY 207 CY Sbjct: 197 --CY 198 >gi|254459832|ref|ZP_05073248.1| ABC-type glutamine transport system, permease component [Rhodobacterales bacterium HTCC2083] gi|206676421|gb|EDZ40908.1| ABC-type glutamine transport system, permease component [Rhodobacteraceae bacterium HTCC2083] Length = 255 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/194 (38%), Positives = 112/194 (57%), Gaps = 7/194 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L T+ ++ I+ +S+IIG +A+ + S+ I L Y+ R PLL L Sbjct: 42 RFLLNGFGATILLSVIAAAMSMIIGMLVALPGMS-SNRWIRLPSRIYIEFVRAIPLLPML 100 Query: 75 FVIFYGLP------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 F +FYGLP I I D+F II+L ++ SA+ +EI RS I SI KGQ +A+ + Sbjct: 101 FWVFYGLPVVLKSMGINISIDAFWGAIITLAISDSAFTAEIYRSGIQSIAKGQTEAAKTV 160 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL QT+R++ILPQ I PL+++FI I+K ++ AS I + E+ + A +V T Y+P Sbjct: 161 GLNYTQTMRYVILPQAIRRILPPLANQFIYIVKMSAFASVIGMQELTRRANELVVTEYRP 220 Query: 189 LIIYCELAFVYLIL 202 L IY L YL+L Sbjct: 221 LEIYTLLILEYLVL 234 >gi|229815591|ref|ZP_04445918.1| hypothetical protein COLINT_02642 [Collinsella intestinalis DSM 13280] gi|229808821|gb|EEP44596.1| hypothetical protein COLINT_02642 [Collinsella intestinalis DSM 13280] Length = 463 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/201 (35%), Positives = 123/201 (61%), Gaps = 5/201 (2%) Query: 5 WFN--LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 +FN LI+ S P +++ ++++ I ++F +++ GF A++RI S I+ + YV Sbjct: 218 FFNPVLIVSSLP-IIFGGFLMSVAIVLVAFPLAIPFGFLFALMRISKS-RILRALAAVYV 275 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTP +Q+++ F+GLP G+ D++ +I + +N +AY+ EI R+ I SIPKGQ Sbjct: 276 NLIRGTPAFLQIYIAFFGLPLAGVNIDNYTLGVIVMAMNSAAYLCEIFRAGIQSIPKGQS 335 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ ++G++ QT+ II+PQT L+SEFI + K TS+ + + + EI A+ IV Sbjct: 336 EAARSLGMSAAQTMVSIIIPQTFRNVIPTLTSEFILLYKDTSLLAAVGVMEIVMYAKTIV 395 Query: 183 STTYQPLIIYCELAFVYLILT 203 +TT + Y A YL++T Sbjct: 396 ATTGS-ITPYVVAALFYLVVT 415 >gi|332359695|gb|EGJ37512.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK355] Length = 729 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 118/210 (56%), Gaps = 8/210 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L + VT+ +A ISF I+++IG + + + I +V + RG PL++ Sbjct: 520 QELLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPL-RWIAEIFVDVIRGIPLMIVA 578 Query: 75 FVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 IF+G+P++ ++FVA I+L+LN AYI+EI+R I ++P GQ +AS + Sbjct: 579 AFIFWGIPNLIESMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRS 638 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ +T+R IILPQ ++F+ LK T++ S I + E+F+T + I++ YQ Sbjct: 639 LGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQ 698 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +Y LA +YLI+ + + ++E + Sbjct: 699 SFRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|227520033|ref|ZP_03950082.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|229546924|ref|ZP_04435649.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|229550512|ref|ZP_04439237.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|293382718|ref|ZP_06628643.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis R712] gi|293388099|ref|ZP_06632627.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis S613] gi|307268500|ref|ZP_07549875.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|307276436|ref|ZP_07557559.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|307286974|ref|ZP_07567049.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|312908613|ref|ZP_07767555.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|312909239|ref|ZP_07768096.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|312952647|ref|ZP_07771511.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|227072581|gb|EEI10544.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|229304369|gb|EEN70365.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|229307852|gb|EEN73839.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|291079878|gb|EFE17242.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis R712] gi|291082550|gb|EFE19513.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis S613] gi|306501920|gb|EFM71209.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|306506916|gb|EFM76063.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|306515161|gb|EFM83701.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|310625400|gb|EFQ08683.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|310629435|gb|EFQ12718.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|311290481|gb|EFQ69037.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|315026795|gb|EFT38727.1| ABC transporter, permease protein [Enterococcus faecalis TX2137] gi|315032967|gb|EFT44899.1| ABC transporter, permease protein [Enterococcus faecalis TX0017] gi|315147131|gb|EFT91147.1| ABC transporter, permease protein [Enterococcus faecalis TX4244] gi|315153569|gb|EFT97585.1| ABC transporter, permease protein [Enterococcus faecalis TX0031] gi|315156251|gb|EFU00268.1| ABC transporter, permease protein [Enterococcus faecalis TX0043] gi|315158604|gb|EFU02621.1| ABC transporter, permease protein [Enterococcus faecalis TX0312] gi|315165862|gb|EFU09879.1| ABC transporter, permease protein [Enterococcus faecalis TX1302] gi|315171420|gb|EFU15437.1| ABC transporter, permease protein [Enterococcus faecalis TX1342] gi|315172654|gb|EFU16671.1| ABC transporter, permease protein [Enterococcus faecalis TX1346] gi|327534044|gb|AEA92878.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis OG1RF] Length = 546 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 12/209 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----------FFSDTIIS 55 F I + + + +TL IA I V+ +G I V R FF + + Sbjct: 306 FKNIWNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQ-KLGN 364 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 LI+ Y+ +FRGTP++VQ VIFYGL GI D VA + +++N AY+SEI+R I Sbjct: 365 LILSIYIEVFRGTPMMVQAMVIFYGLALAFGISLDRTVAALFIVSVNTGAYMSEIVRGGI 424 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ KGQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++ Sbjct: 425 FAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADL 484 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 F +Q + + +YL++T Sbjct: 485 FFQGNAASGANFQFFQTFTIVGIMYLVMT 513 >gi|172056977|ref|YP_001813437.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sibiricum 255-15] gi|171989498|gb|ACB60420.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sibiricum 255-15] Length = 218 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 124/218 (56%), Gaps = 9/218 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F I DS P +L I V + ++ + ++IG +A ++I + + I H Y +F Sbjct: 4 FTKIQDSIPYILQG-IPVLFQVVIVAAIAGMLIGIVVAALKIT-KNGFVRFIGHAYTAVF 61 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I +GLP + G V + + II+ +LN AYISEIIR+ I ++ +GQW+A Sbjct: 62 RGTPLILQLAIIHFGLPQLTGYVTTGYQSAIIAFSLNSGAYISEIIRAGIQAVDRGQWEA 121 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R IILPQ + +E I++ K +++ ST+ + ++ + AQ + Sbjct: 122 ADALGIPYMKQLRSIILPQAFKNILPAIMNELITLTKESALISTVGVLDVMRRAQVVGGE 181 Query: 185 T---YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 ++PL+ FVY +L +I ++E ++ + Sbjct: 182 KALYFEPLLFA---GFVYFVLVMGLSLIGQQVEKAMRK 216 >gi|240145928|ref|ZP_04744529.1| putative amino acid ABC transporter, permease/amino acid-binding protein [Roseburia intestinalis L1-82] gi|257201957|gb|EEV00242.1| putative amino acid ABC transporter, permease/amino acid-binding protein [Roseburia intestinalis L1-82] Length = 513 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 126/225 (56%), Gaps = 19/225 (8%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD----TIISLIMHF 60 + N + DS L + TL I ++ ++ ++ GF IA++R TI++ + Sbjct: 293 YDNFVKDSRYVYLLKGLGNTLLITVLALLVGVVFGFLIAIVRTNHDRNGGLTILNALCKL 352 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF-----VAIIISLTLNFSAYISEIIRSSII 115 Y+ I RGTP+++QL +I+Y ++F S V +I+ LN +AY++EI+RS I+ Sbjct: 353 YLTIVRGTPVMIQLLIIYY------VIFQSIDTGKIVVAVIAFGLNSAAYVAEIVRSGIM 406 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ GQ++A ++GL KQT+ IILPQ + L +EFIS+LK TS++ I + ++ Sbjct: 407 AVDIGQFEAGRSLGLNYKQTMMSIILPQAVKNILPALCNEFISLLKETSISGYIGLMDLT 466 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIESS 216 + I S TY+ + +A +YLI L+ +++ K+ S+ Sbjct: 467 KGGDIIRSVTYEAFMPLIAVALIYLIMVMGLSKVVNLLERKLRSN 511 >gi|73542697|ref|YP_297217.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134] gi|72120110|gb|AAZ62373.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134] Length = 217 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 122/203 (60%), Gaps = 9/203 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + I+ +S+ +G +A+ RI ++S +++ Y+W+ RGTPL++Q+ I++ LP Sbjct: 17 ITLTLFFITLALSVPLGLALALARIS-KWPLLSSLVNGYIWLMRGTPLMLQMLFIYFALP 75 Query: 83 H---IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 IG+ F A +++ LN++AY +EI R+ I S+ +GQ++AS A+G+T QT+R + Sbjct: 76 FVPVIGVRLPDFPAAVVAFALNYAAYFAEIFRAGIKSVDRGQYEASKALGMTYFQTMRRV 135 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST--TYQPLIIYCELAF 197 +LPQ ++ P+S+E I+++K TS+ + + +I +TA+ IV T P ++ A Sbjct: 136 VLPQMVSRVLPPVSNETITLIKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVA---AL 192 Query: 198 VYLILTSFCYIIQIKIESSVTQH 220 YL++T +E +H Sbjct: 193 FYLLMTLILTWFFQNLEKRYAKH 215 >gi|30018827|ref|NP_830458.1| glutamine transport system permease protein glnP [Bacillus cereus ATCC 14579] gi|229108251|ref|ZP_04237873.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock1-15] gi|229126073|ref|ZP_04255095.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-Cer4] gi|229143369|ref|ZP_04271800.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST24] gi|296501402|ref|YP_003663102.1| glutamine transport system permease GlnP [Bacillus thuringiensis BMB171] gi|29894369|gb|AAP07659.1| Glutamine transport system permease protein glnP [Bacillus cereus ATCC 14579] gi|228640176|gb|EEK96575.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST24] gi|228657395|gb|EEL13211.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-Cer4] gi|228675267|gb|EEL30489.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock1-15] gi|296322454|gb|ADH05382.1| glutamine transport system permease protein glnP [Bacillus thuringiensis BMB171] Length = 214 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 103/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A I+ V+S IIG I ++R + ++S ++ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVIGILR-YTKIPVVSQVLGVIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|257421538|ref|ZP_05598528.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|294779326|ref|ZP_06744729.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|257163362|gb|EEU93322.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|294453612|gb|EFG22011.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|323479461|gb|ADX78900.1| amino acid permease ABC transporter protein [Enterococcus faecalis 62] Length = 527 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 12/209 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----------FFSDTIIS 55 F I + + + +TL IA I V+ +G I V R FF + + Sbjct: 287 FKNIWNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQ-KLGN 345 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 LI+ Y+ +FRGTP++VQ VIFYGL GI D VA + +++N AY+SEI+R I Sbjct: 346 LILSIYIEVFRGTPMMVQAMVIFYGLALAFGISLDRTVAALFIVSVNTGAYMSEIVRGGI 405 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ KGQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++ Sbjct: 406 FAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADL 465 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 F +Q + + +YL++T Sbjct: 466 FFQGNAASGANFQFFQTFTIVGIMYLVMT 494 >gi|329577432|gb|EGG58881.1| ABC transporter, permease protein [Enterococcus faecalis TX1467] Length = 546 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 12/209 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----------FFSDTIIS 55 F I + + + +TL IA I V+ +G I V R FF + + Sbjct: 306 FKNIWNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQ-KLGN 364 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 LI+ Y+ +FRGTP++VQ VIFYGL GI D VA + +++N AY+SEI+R I Sbjct: 365 LILSIYIEVFRGTPMMVQAMVIFYGLALAFGISLDRTVAALFIVSVNTGAYMSEIVRGGI 424 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ KGQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++ Sbjct: 425 FAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADL 484 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 F +Q + + +YL++T Sbjct: 485 FFQGNAASGANFQFFQTFTIVGIMYLVMT 513 >gi|324990984|gb|EGC22918.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK353] Length = 729 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 118/210 (56%), Gaps = 8/210 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L + VT+ +A ISF I+++IG + + + I +V + RG PL++ Sbjct: 520 QELLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPL-RWIAEIFVDVIRGIPLMIVA 578 Query: 75 FVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 IF+G+P++ ++FVA I+L+LN AYI+EI+R I ++P GQ +AS + Sbjct: 579 AFIFWGIPNLIESMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRS 638 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ +T+R IILPQ ++F+ LK T++ S I + E+F+T + I++ YQ Sbjct: 639 LGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQ 698 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +Y LA +YLI+ + + ++E + Sbjct: 699 SFRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|322833013|ref|YP_004213040.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321168214|gb|ADW73913.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 221 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 64/220 (29%), Positives = 124/220 (56%), Gaps = 2/220 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + I+ + P L A ++ TL + I+ + SL+ G +AV + + ++H Y + Sbjct: 3 WQAILTALPSL-GAGMIATLKLCAIAAICSLLWGTLMAVA-LMRAPPFWQRLLHLYTSLT 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 PLL+ ++++++ LP I S +++LTL ++ YI++++RS+I +P+GQW+A Sbjct: 61 LALPLLIVIYLLYFVLPEYDITLTSPQVGVLALTLYYAPYIAQVVRSAIEMLPRGQWEAC 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GL+R + +R ++LPQT+ PL I ++K +++ S +++ E A++ +S T Sbjct: 121 RVLGLSRTEQLRDVVLPQTLPQMLSPLVGLMIGLIKDSALLSIVSVQEFMYAARQAISET 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 Y PL IY +A Y +L S + IE +T++ S+ Sbjct: 181 YAPLEIYLTVALCYWVLNSLIDWLARHIEFRMTRYRRSMQ 220 >gi|229095294|ref|ZP_04226286.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-29] gi|229101402|ref|ZP_04232146.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-28] gi|229114243|ref|ZP_04243664.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock1-3] gi|228669263|gb|EEL24684.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock1-3] gi|228682107|gb|EEL36240.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-28] gi|228688153|gb|EEL42039.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-29] Length = 214 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 103/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + ++S I+ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILR-YTKIPVVSQILGVIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITATIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|257083726|ref|ZP_05578087.1| ABC-type amino acid transport system [Enterococcus faecalis Fly1] gi|256991756|gb|EEU79058.1| ABC-type amino acid transport system [Enterococcus faecalis Fly1] Length = 213 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 58/159 (36%), Positives = 99/159 (62%), Gaps = 1/159 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +++ Y+W+ RGTPLL+QL +FYGLP IGIVF+ + A + + LN++AY +EI R I + Sbjct: 50 LINLYIWLMRGTPLLLQLIFVFYGLPLIGIVFERYDAALFAFILNYAAYFAEIFRGGIQA 109 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQ++A+ + LTR QT+ IILPQ + + +E I+++K TS+ + + ++ + Sbjct: 110 IPQGQYEAAKVLRLTRFQTVTRIILPQVVKIVLPSVGNEIINLVKDTSLIYVLGLGDLLR 169 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 A +I + L+ + +YL+ T+ + KIE Sbjct: 170 -AGKIAMSRDVTLVPLALVGLIYLLFTAILTVASKKIEK 207 >gi|58040006|ref|YP_191970.1| amino acid ABC transporter permease [Gluconobacter oxydans 621H] gi|58002420|gb|AAW61314.1| Amino acid ABC transporter binding protein and permease protein [Gluconobacter oxydans 621H] Length = 508 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/191 (36%), Positives = 118/191 (61%), Gaps = 1/191 (0%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 SF L+ A ++TL ++ ++ V+++ +G +A+ R + + + YV + RGTPLL Sbjct: 294 SFLPLIGQAALMTLAVSALAMVLAVALGLLLALSR-HYGAAPLRFVAGVYVEVVRGTPLL 352 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +Q+ IFYGLP GI F+A ++SL LN++AY +E R+ ++S+P+GQ +A+ A+ +T Sbjct: 353 IQVLFIFYGLPAFGIRLSPFMAGVLSLGLNYAAYEAENYRAGLLSVPRGQMEAAIALNMT 412 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 Q +R +I+PQ T ++++FIS+LK +S+ S IT+ E+ QT R+ ST Y Sbjct: 413 HWQALRLVIVPQAFRTVVPVMTNDFISLLKDSSLVSVITLTELSQTYVRLSSTYYDYFGT 472 Query: 192 YCELAFVYLIL 202 + YL+L Sbjct: 473 GIMVGLAYLLL 483 >gi|331003246|ref|ZP_08326753.1| hypothetical protein HMPREF0491_01615 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412899|gb|EGG92279.1| hypothetical protein HMPREF0491_01615 [Lachnospiraceae oral taxon 107 str. F0167] Length = 230 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/213 (32%), Positives = 124/213 (58%), Gaps = 17/213 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHFYVWIFRGTPLLV 72 L+ + VTL I + ++ ++GF +AV+R + +T ++ I + Y+ + RGTP++V Sbjct: 22 LFKGLGVTLVITFFAVILGFVLGFSVAVVRNIYDNTKRLKFLNFICNIYLTVIRGTPVVV 81 Query: 73 QLFVIFYGLPHIGIVF-----DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 QL +I++ ++F D VA I++ +N AY +EI RS I S+PKGQ +A + Sbjct: 82 QLLIIYF------VIFSSMRVDKSVAAILAFGINSGAYQAEIFRSGINSVPKGQMEAGRS 135 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G QT+ II+PQ I L++EFI ++K TSVA I + ++ + I S TY Sbjct: 136 LGFNYAQTMIFIIMPQAIKNILPTLANEFIVLMKETSVAGYIALEDLTKAGDVIRSRTYS 195 Query: 188 PLIIYCELAFVYLILTS-FCYIIQIKIESSVTQ 219 ++ + +A +YLI+ F Y++++ +E S+ + Sbjct: 196 AMMPFLAVALLYLIMVMLFSYLVKL-LERSLAK 227 >gi|332366701|gb|EGJ44442.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1059] Length = 729 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 118/210 (56%), Gaps = 8/210 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L + VT+ +A ISF I+++IG + + + I +V + RG PL++ Sbjct: 520 QELLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPL-RWIAEIFVDVIRGIPLMIVA 578 Query: 75 FVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 IF+G+P++ ++FVA I+L+LN AYI+EI+R I ++P GQ +AS + Sbjct: 579 AFIFWGIPNLIESMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRS 638 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ +T+R IILPQ ++F+ LK T++ S I + E+F+T + I++ YQ Sbjct: 639 LGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQ 698 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +Y LA +YLI+ + + ++E + Sbjct: 699 SFRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|327470838|gb|EGF16294.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK330] Length = 729 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 118/210 (56%), Gaps = 8/210 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L + VT+ +A ISF I+++IG + + + I +V + RG PL++ Sbjct: 520 QELLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPL-RWIAEIFVDVIRGIPLMIVA 578 Query: 75 FVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 IF+G+P++ ++FVA I+L+LN AYI+EI+R I ++P GQ +AS + Sbjct: 579 AFIFWGIPNLIESMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRS 638 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ +T+R IILPQ ++F+ LK T++ S I + E+F+T + I++ YQ Sbjct: 639 LGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQ 698 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +Y LA +YLI+ + + ++E + Sbjct: 699 SFRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|325687630|gb|EGD29651.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK72] Length = 729 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 118/210 (56%), Gaps = 8/210 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L + VT+ +A ISF I+++IG + + + I +V + RG PL++ Sbjct: 520 QELLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPL-RWIAEIFVDVIRGIPLMIVA 578 Query: 75 FVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 IF+G+P++ ++FVA I+L+LN AYI+EI+R I ++P GQ +AS + Sbjct: 579 AFIFWGIPNLIESMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRS 638 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ +T+R IILPQ ++F+ LK T++ S I + E+F+T + I++ YQ Sbjct: 639 LGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQ 698 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +Y LA +YLI+ + + ++E + Sbjct: 699 SFRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|29374889|ref|NP_814042.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis V583] gi|29342347|gb|AAO80113.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis V583] Length = 527 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 12/209 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----------FFSDTIIS 55 F I + + + +TL IA I V+ +G I V R FF + + Sbjct: 287 FKNIWNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQ-KLGN 345 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 LI+ Y+ +FRGTP++VQ VIFYGL GI D VA + +++N AY+SEI+R I Sbjct: 346 LILSIYIEVFRGTPMMVQAMVIFYGLALAFGISLDRTVAALFIVSVNTGAYMSEIVRGGI 405 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ KGQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++ Sbjct: 406 FAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADL 465 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 F +Q + + +YL++T Sbjct: 466 FFQGNAASGANFQFFQTFTIVGIMYLVMT 494 >gi|325695929|gb|EGD37820.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK160] Length = 729 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 118/210 (56%), Gaps = 8/210 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L + VT+ +A ISF I+++IG + + + I +V + RG PL++ Sbjct: 520 QELLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPL-RWIAEIFVDVIRGIPLMIVA 578 Query: 75 FVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 IF+G+P++ ++FVA I+L+LN AYI+EI+R I ++P GQ +AS + Sbjct: 579 AFIFWGIPNLIESMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRS 638 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ +T+R IILPQ ++F+ LK T++ S I + E+F+T + I++ YQ Sbjct: 639 LGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQ 698 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +Y LA +YLI+ + + ++E + Sbjct: 699 SFRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|227327468|ref|ZP_03831492.1| ABC transporter permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 221 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 116/204 (56%), Gaps = 4/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y+W F+L+ + P LL + VTL + ++ V+ +G + + R+F +SL Sbjct: 1 MHYQWDFSLVWHNIPVLL-KGLGVTLELWLLAGVLGTALGLVLGLFRVF-GKRWLSLPAR 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 +V IFR TP+L+QL +Y P +G+ F +F A ++LTL +AY +EI R+ + SI Sbjct: 59 CFVEIFRNTPVLIQLIWFYYAFPVLVGLQFSTFGAAALALTLYSAAYCTEIFRAGLQSID 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQW+ + A+G+ +R ++LPQ + L++ I + K TS+AS + + E+ Sbjct: 119 HGQWEGAKALGMRHSVILRRVVLPQVLRNMLPALTNRMIELAKVTSLASILAVNELMYQG 178 Query: 179 QRIVSTTYQPLIIYCELAFVYLIL 202 + + ST Y+PL I +A +Y +L Sbjct: 179 RLLSSTYYRPLEILTVVALLYFVL 202 >gi|242279754|ref|YP_002991883.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242122648|gb|ACS80344.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 222 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/159 (40%), Positives = 95/159 (59%), Gaps = 5/159 (3%) Query: 46 RIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSA 104 R FF+ I + YV RGTP+LVQ ++YG+P IG+ A II + +N A Sbjct: 49 RNFFTRKIAGV----YVEAIRGTPMLVQAMFLYYGVPMAIGMRIPPMTAGIIIIAVNSGA 104 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 YI+EI+R ++ SI KGQ++A +IGLT QT+R II PQ + PL ++FI LK TS Sbjct: 105 YIAEIVRGAVQSINKGQFEAGRSIGLTNTQTMRFIIWPQALKRMIPPLGNQFIISLKDTS 164 Query: 165 VASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + I + E+ +T Q I S ++ +Y +A VYL++T Sbjct: 165 LLMVIGVGELMRTGQEITSVNFRAFEVYLAVACVYLVMT 203 >gi|325694667|gb|EGD36574.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK150] Length = 729 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 118/210 (56%), Gaps = 8/210 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L + VT+ +A ISF I+++IG + + + I +V + RG PL++ Sbjct: 520 QELLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPL-RWIAEIFVDVIRGIPLMIVA 578 Query: 75 FVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 IF+G+P++ ++FVA I+L+LN AYI+EI+R I ++P GQ +AS + Sbjct: 579 AFIFWGIPNLIESMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRS 638 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ +T+R IILPQ ++F+ LK T++ S I + E+F+T + I++ YQ Sbjct: 639 LGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQ 698 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +Y LA +YLI+ + + ++E + Sbjct: 699 SFRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|229188847|ref|ZP_04315881.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus ATCC 10876] gi|228594660|gb|EEK52445.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus ATCC 10876] Length = 214 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 103/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A I+ V+S IIG I ++R + ++S ++ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVIGILR-YTKIPVVSQVLGVIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|224823569|ref|ZP_03696678.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] gi|224604024|gb|EEG10198.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] Length = 229 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 129/231 (55%), Gaps = 16/231 (6%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y++ + +LL + +TL + +S + ++ +AV R+ + T+ +L Sbjct: 1 MLYDYLGFAFEHGQELL-DGLWITLKLLALSSLGGFLLALPLAVARVSPNRTVAAL-ARG 58 Query: 61 YVWIFRGTPLLVQLFVIFYGL---------PHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 Y +FRGTPLLVQ+F+++YG P ++ D+F +++LTLN +AY++E +R Sbjct: 59 YSALFRGTPLLVQIFILYYGFSQFEAVRNSPAWFVLADAFNCALLALTLNIAAYMAEDLR 118 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + II +P G+ +A+ A G+ R + HIILP+ I +A L +E +S LK++++AS IT+ Sbjct: 119 AGIIGVPHGEKEAALAYGMGRCGSYLHIILPRAIGIAAPALGNEVVSQLKASALASVITV 178 Query: 172 PEIFQTAQRIVSTTY--QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E+ A+R + +Y PLI+ +Y+ +T ++ E + H Sbjct: 179 LEVTGVARRFSAQSYSTDPLIV---AGLLYVAVTLLLSLLARLAERRINCH 226 >gi|298294199|ref|YP_003696138.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296930710|gb|ADH91519.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 214 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 116/192 (60%), Gaps = 2/192 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D F LL AA+ T+ ++ I+F ++ + +R+ F + +H YV +F+GTPL Sbjct: 8 DVFRNLL-AAVPWTIYLSLIAFAGGAVVSLILLSLRLAFPR-VAGRPVHLYVQVFQGTPL 65 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L+QLF++++GL +GI +A + L++ SAY++E ++++PKGQW+AS ++GL Sbjct: 66 LMQLFLVYFGLALMGIQTTPLLAASLCLSVYSSAYLTETWYGCVLAVPKGQWEASSSLGL 125 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 Q + IILPQ + S P + I+K+TS+AS + E+ + +Q I + T++P + Sbjct: 126 PHWQQMLLIILPQALRLSVPPTVGLMVQIVKNTSLASIVGFVELTRASQIIANATFEPFL 185 Query: 191 IYCELAFVYLIL 202 Y +AF+Y ++ Sbjct: 186 AYGAVAFIYFVI 197 >gi|291539690|emb|CBL12801.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Roseburia intestinalis XB6B4] Length = 513 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 126/225 (56%), Gaps = 19/225 (8%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD----TIISLIMHF 60 + N + DS L + TL I ++ ++ ++ GF IA++R TI++ + Sbjct: 293 YDNFVKDSRYVYLLKGLGNTLLITVLALLVGVVFGFLIAIVRTNHDRNGGLTILNALCKL 352 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF-----VAIIISLTLNFSAYISEIIRSSII 115 Y+ I RGTP+++QL +I+Y ++F S V +I+ LN +AY++EI+RS I+ Sbjct: 353 YLTIVRGTPVMIQLLIIYY------VIFQSIDTGKIVVAVIAFGLNSAAYVAEIVRSGIM 406 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ GQ++A ++GL KQT+ IILPQ + L +EFIS+LK TS++ I + ++ Sbjct: 407 AVDIGQFEAGRSLGLNYKQTMMSIILPQAVKNILPALCNEFISLLKETSISGYIGLMDLT 466 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIESS 216 + I S TY+ + +A +YLI L+ +++ K+ S+ Sbjct: 467 KGGDIIRSVTYEAFMPLIAVALIYLIMVMGLSKVVNLLERKLRSN 511 >gi|254975774|ref|ZP_05272246.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-66c26] gi|255093161|ref|ZP_05322639.1| amino-acid ABC transporter, permease protein [Clostridium difficile CIP 107932] gi|255314903|ref|ZP_05356486.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-76w55] gi|255517577|ref|ZP_05385253.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-97b34] gi|255650688|ref|ZP_05397590.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-37x79] gi|260683775|ref|YP_003215060.1| putative amino-acid ABC transporter permease [Clostridium difficile CD196] gi|260687435|ref|YP_003218569.1| putative amino-acid ABC transporter permease [Clostridium difficile R20291] gi|306520613|ref|ZP_07406960.1| putative amino-acid ABC transporter, permease protein [Clostridium difficile QCD-32g58] gi|260209938|emb|CBA63911.1| probable amino-acid ABC transporter, permease protein [Clostridium difficile CD196] gi|260213452|emb|CBE05129.1| probable amino-acid ABC transporter, permease protein [Clostridium difficile R20291] Length = 222 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 78/220 (35%), Positives = 130/220 (59%), Gaps = 11/220 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYV 62 F + FP L A+ +T+ I+ ++F +S+++G VI FF+ T ++ I YV Sbjct: 6 FEFCLSIFP-FLIKALGITILISIVAFFLSILLG----VILAFFTQTKSKVLQYITRVYV 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHI-GIVFDS--FVAIIISLTLNFSAYISEIIRSSIISIPK 119 FRGTPLL+Q+F ++G P I + D ++AI+I L +N SAY++EIIR+SI S+ K Sbjct: 61 SFFRGTPLLIQIFFFYFGFPMIFSFMKDCSPYLAIVICLGVNSSAYMTEIIRASIESVDK 120 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A YA GL++ Q++ IILPQ T++ P+ S + I+K +S+ TI I ++ AQ Sbjct: 121 GQQEACYAFGLSKYQSMVKIILPQAATSAVPPIVSCTLDIIKGSSLGLTIGIQDLMGVAQ 180 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 +++++ IY +Y ++ IQ K+E + + Sbjct: 181 VEAASSFKYFEIYMITILIYWAVSIILSNIQSKVEKRIGK 220 >gi|323351404|ref|ZP_08087060.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] gi|322122628|gb|EFX94339.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] Length = 729 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 118/210 (56%), Gaps = 8/210 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L + VT+ +A ISF I+++IG + + + I +V + RG PL++ Sbjct: 520 QELLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPL-RWIAEIFVDVIRGIPLMIVA 578 Query: 75 FVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 IF+G+P++ ++FVA I+L+LN AYI+EI+R I ++P GQ +AS + Sbjct: 579 AFIFWGIPNLIESMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRS 638 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ +T+R IILPQ ++F+ LK T++ S I + E+F+T + I++ YQ Sbjct: 639 LGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQ 698 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +Y LA +YLI+ + + ++E + Sbjct: 699 SFRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|315646647|ref|ZP_07899764.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus vortex V453] gi|315277973|gb|EFU41294.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus vortex V453] Length = 480 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/184 (35%), Positives = 108/184 (58%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I TL I+ + I+G IA++R+ I+ + Y+ I RGTP+LVQLF+I Y Sbjct: 278 GIQFTLLISALGVFFGFILGLIIALMRMS-GVKILKFLATAYIEIIRGTPMLVQLFIIHY 336 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 L I F + I++L++N +AY++EI R+ I + +GQ +A+ ++G+TR + +RHI Sbjct: 337 SLAAFDIKFSPIQSGILTLSINSAAYLAEIFRAGIQGVDRGQLEAARSLGMTRGKAMRHI 396 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + + +EF+ I+K +S+ S I + +I AQ + +T+ PL A +Y Sbjct: 397 ILPQALKGVLPAIGNEFVVIIKESSIVSFIGVYDIMYQAQILRGSTFAPLNPLLVAAMIY 456 Query: 200 LILT 203 ILT Sbjct: 457 FILT 460 >gi|326315178|ref|YP_004232850.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372014|gb|ADX44283.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 260 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/175 (34%), Positives = 101/175 (57%), Gaps = 3/175 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + +S L++G A+ R T + + FY+W+ RGTPLLVQ+ +++ LP Sbjct: 59 TLWLTLVSGFCGLVLGTGAALARTA-RWTPLRWVSRFYIWVIRGTPLLVQILFVYFALPV 117 Query: 84 I--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + G+ F A +++L LN AY SE IR+ ++++P+GQ +A+ A+GL+R ++ Sbjct: 118 LVPGLNLPDFAAAVVALGLNVGAYNSEAIRAGLLAVPRGQTEAARALGLSRTHVFFDVVF 177 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 PQ S PL S F+++LK +S+A I + E+ RI S T+QP+ +A Sbjct: 178 PQAFKISLPPLVSNFVALLKDSSLAYAIGVVELTNVGNRIQSATFQPIATLSTVA 232 >gi|257081536|ref|ZP_05575897.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol] gi|256989566|gb|EEU76868.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol] Length = 507 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 12/209 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----------FFSDTIIS 55 F I + + + +TL IA I V+ +G I V R FF + + Sbjct: 267 FKNIWNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQ-KLGN 325 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 LI+ Y+ +FRGTP++VQ VIFYGL GI D VA + +++N AY+SEI+R I Sbjct: 326 LILSIYIEVFRGTPMMVQAMVIFYGLALAFGISLDRTVAALFIVSVNTGAYMSEIVRGGI 385 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ KGQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++ Sbjct: 386 FAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADL 445 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 F +Q + + +YL++T Sbjct: 446 FFQGNAASGANFQFFQTFTIVGIMYLVMT 474 >gi|302526883|ref|ZP_07279225.1| predicted protein [Streptomyces sp. AA4] gi|302435778|gb|EFL07594.1| predicted protein [Streptomyces sp. AA4] Length = 495 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 56/149 (37%), Positives = 95/149 (63%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I + YV + RGTP +VQLF I++GLP +G+ A I+SL L +Y++EI R ++ S Sbjct: 331 IGNVYVSVIRGTPFVVQLFFIYFGLPQLGLQLPPMTAGIVSLGLYSGSYVTEIFRGAVQS 390 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ +A+ + G+++ +RH+I+PQ PL +EF+S+ K++++ S +TI E+F Sbjct: 391 IDRGQLEAARSCGMSQVSAMRHVIIPQAFLRMLPPLGNEFVSLTKNSALVSFVTIHELFL 450 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSF 205 Q I+S T+ L +Y + +Y +LT+ Sbjct: 451 VGQTIISRTFDALTVYLFIGLLYYLLTNL 479 >gi|325690565|gb|EGD32568.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK115] Length = 729 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 118/210 (56%), Gaps = 8/210 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L + VT+ +A ISF I+++IG + + + I +V + RG PL++ Sbjct: 520 QELLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPL-RWIAEIFVDVIRGIPLMIVA 578 Query: 75 FVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 IF+G+P++ ++FVA I+L+LN AYI+EI+R I ++P GQ +AS + Sbjct: 579 AFIFWGIPNLIESMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRS 638 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ +T+R IILPQ ++F+ LK T++ S I + E+F+T + I++ YQ Sbjct: 639 LGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQ 698 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +Y LA +YLI+ + + ++E + Sbjct: 699 SFRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|325289250|ref|YP_004265431.1| amino acid ABC transporter membrane protein 2, PAAT family [Syntrophobotulus glycolicus DSM 8271] gi|324964651|gb|ADY55430.1| amino acid ABC transporter membrane protein 2, PAAT family [Syntrophobotulus glycolicus DSM 8271] Length = 239 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 78/232 (33%), Positives = 125/232 (53%), Gaps = 14/232 (6%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + + FP +L +A+ VTL IA +S + +I+G IA+ RI+ ++S I YV Sbjct: 6 LDFALKQFPAVL-SAVPVTLLIAVVSMFLGMILGLLIALCRIY-KVPVLSKIAAVYVSFI 63 Query: 66 RGTPLLVQLFVIFYGLP-HIGIVFDSFVAI-----------IISLTLNFSAYISEIIRSS 113 RGTP+LVQL+V FYG P +G + F I +++ T+N SAY SE IRS+ Sbjct: 64 RGTPILVQLYVFFYGTPIALGFLNREFAGIFPDEIPPLACALLAYTINASAYHSEYIRSA 123 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + SI GQ +A+Y++GLT Q I +ILPQ + + + FI ++K ++V I + E Sbjct: 124 LNSIDSGQIEAAYSVGLTTAQGICRVILPQALIIALPNFVNVFIGLIKGSAVVFAIKVVE 183 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 I A+ I S Y+ L +Y + A +Y ++ + +E + +D Sbjct: 184 IMAVAKIIASEGYRFLEMYFDAAIIYWVICLLLERLVALLEKRLRNREAKID 235 >gi|257418660|ref|ZP_05595654.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|257160488|gb|EEU90448.1| ABC amino acid transporter [Enterococcus faecalis T11] Length = 507 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 12/209 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----------FFSDTIIS 55 F I + + + +TL IA I V+ +G I V R FF + + Sbjct: 267 FKNIWNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQ-KLGN 325 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 LI+ Y+ +FRGTP++VQ VIFYGL GI D VA + +++N AY+SEI+R I Sbjct: 326 LILSIYIEVFRGTPMMVQAMVIFYGLALAFGISLDRTVAALFIVSVNTGAYMSEIVRGGI 385 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ KGQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++ Sbjct: 386 FAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADL 445 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 F +Q + + +YL++T Sbjct: 446 FFQGNAASGANFQFFQTFTIVGIMYLVMT 474 >gi|255974748|ref|ZP_05425334.1| aminoacid ABC transporter [Enterococcus faecalis T2] gi|256964171|ref|ZP_05568342.1| amino acid ABC transporter substrate binding protein/permease [Enterococcus faecalis HIP11704] gi|255967620|gb|EET98242.1| aminoacid ABC transporter [Enterococcus faecalis T2] gi|256954667|gb|EEU71299.1| amino acid ABC transporter substrate binding protein/permease [Enterococcus faecalis HIP11704] Length = 507 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 12/209 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----------FFSDTIIS 55 F I + + + +TL IA I V+ +G I V R FF + + Sbjct: 267 FKNIWNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQ-KLGN 325 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 LI+ Y+ +FRGTP++VQ VIFYGL GI D VA + +++N AY+SEI+R I Sbjct: 326 LILSIYIEVFRGTPMMVQAMVIFYGLALAFGISLDRTVAALFIVSVNTGAYMSEIVRGGI 385 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ KGQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++ Sbjct: 386 FAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADL 445 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 F +Q + + +YL++T Sbjct: 446 FFQGNAASGANFQFFQTFTIVGIMYLVMT 474 >gi|300868857|ref|ZP_07113463.1| putative ABC transporter, permease protein [Oscillatoria sp. PCC 6506] gi|300333074|emb|CBN58655.1| putative ABC transporter, permease protein [Oscillatoria sp. PCC 6506] Length = 217 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/180 (37%), Positives = 111/180 (61%), Gaps = 2/180 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ I+F+ I+GF + ++RI + II + YV F+GTPLL+QLF+ F+GL Sbjct: 20 TIALSAIAFIGGGIVGFLVMLMRIS-PNKIIKYLSLIYVEFFQGTPLLMQLFLTFFGLSV 78 Query: 84 I-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 I + ++A I+LT SA+++EI R S+ +IPKGQW+AS A+GL + ++ IILP Sbjct: 79 IFNLNLSPWIAAAIALTTYTSAFLAEIWRGSVAAIPKGQWEASTALGLNYFKQLQRIILP 138 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q I S P + ++K TS+AS I E+ ++A I + T++P +++ A +Y L Sbjct: 139 QAIKMSIPPTVGFAVQVIKGTSLASVIGFVELTRSATAISNVTFKPFLVFTIAAVIYFCL 198 >gi|126699792|ref|YP_001088689.1| amino-acid ABC transporter permease [Clostridium difficile 630] gi|255101314|ref|ZP_05330291.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-63q42] gi|255307190|ref|ZP_05351361.1| amino-acid ABC transporter, permease protein [Clostridium difficile ATCC 43255] gi|115251229|emb|CAJ69060.1| ABC-type transport system,cystine/aminoacid-family permease [Clostridium difficile] Length = 222 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 78/220 (35%), Positives = 130/220 (59%), Gaps = 11/220 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYV 62 F + FP L A+ +T+ I+ ++F +S+++G VI FF+ T ++ I YV Sbjct: 6 FEFCLSIFP-FLIKALGITILISIVAFFLSILLG----VILAFFTQTKSKVLQYITRVYV 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHI-GIVFDS--FVAIIISLTLNFSAYISEIIRSSIISIPK 119 FRGTPLL+Q+F ++G P I + D ++AI+I L +N SAY++EIIR+SI S+ K Sbjct: 61 SFFRGTPLLIQIFFFYFGFPMIFSFMKDCSPYLAIVICLGVNSSAYMAEIIRASIESVDK 120 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A YA GL++ Q++ IILPQ T++ P+ S + I+K +S+ TI I ++ AQ Sbjct: 121 GQQEACYAFGLSKYQSMVKIILPQAATSAVPPIVSCTLDIIKGSSLGLTIGIQDLMGVAQ 180 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 +++++ IY +Y ++ IQ K+E + + Sbjct: 181 VEAASSFKYFEIYMITILIYWAVSIILSNIQSKVEKRIRR 220 >gi|257088688|ref|ZP_05583049.1| ABC amino acid transporter [Enterococcus faecalis CH188] gi|256997500|gb|EEU84020.1| ABC amino acid transporter [Enterococcus faecalis CH188] Length = 507 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 12/209 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----------FFSDTIIS 55 F I + + + +TL IA I V+ +G I V R FF + + Sbjct: 267 FKNIWNQYGDMFLRGTGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQ-KLGN 325 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 LI+ Y+ +FRGTP++VQ VIFYGL GI D VA + +++N AY+SEI+R I Sbjct: 326 LILSIYIEVFRGTPMMVQAMVIFYGLALAFGISLDRTVAALFIVSVNTGAYMSEIVRGGI 385 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ KGQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++ Sbjct: 386 FAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADL 445 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 F +Q + + +YL++T Sbjct: 446 FFQGNAASGANFQFFQTFTIVGIMYLVMT 474 >gi|255971748|ref|ZP_05422334.1| amino acid ABC transporter, permease [Enterococcus faecalis T1] gi|256618341|ref|ZP_05475187.1| amino acid ABC transporter substrate binding protein/permease [Enterococcus faecalis ATCC 4200] gi|256762043|ref|ZP_05502623.1| amino acid ABC transporter [Enterococcus faecalis T3] gi|256956823|ref|ZP_05560994.1| amino acid ABC transporter substrate binding protein/permease [Enterococcus faecalis DS5] gi|256960629|ref|ZP_05564800.1| ABC-type amino acid transporter [Enterococcus faecalis Merz96] gi|257078493|ref|ZP_05572854.1| ABC-type amino acid transporter [Enterococcus faecalis JH1] gi|257084184|ref|ZP_05578545.1| amino acid ABC transporter substrate binding protein/permease [Enterococcus faecalis Fly1] gi|257088011|ref|ZP_05582372.1| ABC-type amino acid transport system [Enterococcus faecalis D6] gi|257417614|ref|ZP_05594608.1| ABC-type amino acid transport system [Enterococcus faecalis AR01/DG] gi|255962766|gb|EET95242.1| amino acid ABC transporter, permease [Enterococcus faecalis T1] gi|256597868|gb|EEU17044.1| amino acid ABC transporter substrate binding protein/permease [Enterococcus faecalis ATCC 4200] gi|256683294|gb|EEU22989.1| amino acid ABC transporter [Enterococcus faecalis T3] gi|256947319|gb|EEU63951.1| amino acid ABC transporter substrate binding protein/permease [Enterococcus faecalis DS5] gi|256951125|gb|EEU67757.1| ABC-type amino acid transporter [Enterococcus faecalis Merz96] gi|256986523|gb|EEU73825.1| ABC-type amino acid transporter [Enterococcus faecalis JH1] gi|256992214|gb|EEU79516.1| amino acid ABC transporter substrate binding protein/permease [Enterococcus faecalis Fly1] gi|256996041|gb|EEU83343.1| ABC-type amino acid transport system [Enterococcus faecalis D6] gi|257159442|gb|EEU89402.1| ABC-type amino acid transport system [Enterococcus faecalis ARO1/DG] Length = 507 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 12/209 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----------FFSDTIIS 55 F I + + + +TL IA I V+ +G I V R FF + + Sbjct: 267 FKNIWNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQ-KLGN 325 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 LI+ Y+ +FRGTP++VQ VIFYGL GI D VA + +++N AY+SEI+R I Sbjct: 326 LILSIYIEVFRGTPMMVQAMVIFYGLALAFGISLDRTVAALFIVSVNTGAYMSEIVRGGI 385 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ KGQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++ Sbjct: 386 FAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADL 445 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 F +Q + + +YL++T Sbjct: 446 FFQGNAASGANFQFFQTFTIVGIMYLVMT 474 >gi|152995146|ref|YP_001339981.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas sp. MWYL1] gi|150836070|gb|ABR70046.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas sp. MWYL1] Length = 236 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 80/226 (35%), Positives = 129/226 (57%), Gaps = 13/226 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+++++ FP+LL A V +L + IS V+ I IA+ RI I I Y++ F Sbjct: 3 FSVVVEYFPRLLEGAWV-SLQLVLISIVLGGIFALPIALARIS-PVAWIRAIPFAYIFFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQ+F+++YG V +SF+ II+ TLN SAY +EI R +I + Sbjct: 61 RGTPLLVQIFLVYYGASQFDAVRESFLWPILREPYWCAIIAFTLNTSAYTAEIFRGAIQA 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+G+ +A IG+T+ Q R ++LP+ +E I +LK +++ASTITI ++ Sbjct: 121 IPQGEVEACKVIGMTKFQMYRRVLLPRAFGIVLPAYGNEIILMLKGSALASTITILDLTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 A+ I++ TY P+ I+ +YL+++ II I + + Q+ Y Sbjct: 181 MARTIIARTYTPMEIFLAAGAIYLVIS--IVIIAIFRQIELRQNRY 224 >gi|206978167|ref|ZP_03239049.1| amino acid ABC transporter, permease protein [Bacillus cereus H3081.97] gi|206743639|gb|EDZ55064.1| amino acid ABC transporter, permease protein [Bacillus cereus H3081.97] Length = 214 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 103/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + ++S I+ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILR-YMKIPVVSQILGIIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITATIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK T++A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTALAVVISLPELIHNAQ 176 >gi|156934695|ref|YP_001438611.1| glutamine ABC transporter permease protein [Cronobacter sakazakii ATCC BAA-894] gi|156532949|gb|ABU77775.1| hypothetical protein ESA_02530 [Cronobacter sakazakii ATCC BAA-894] Length = 219 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 72/220 (32%), Positives = 126/220 (57%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P LL A +TL I+ + V LIIG R F I + I Sbjct: 1 MQFDW-SAIWPAIPLLLEGA-KMTLWISVLGLVGGLIIGLVAGFAR-SFGGWIANHIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ I RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEIIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL++++TIRH+ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSKRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A +YLI+T + ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVIYLIITLVLSFVLRRLERRMK 217 >gi|89901741|ref|YP_524212.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89346478|gb|ABD70681.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 217 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 120/200 (60%), Gaps = 6/200 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N + D P LL + +TL + I+ V+++ +G +A++RI + SL+ + Y+W+ R Sbjct: 2 NYLADILPPLLQGS-GITLQVFLITLVLAVPLGLGLALLRISRFRFLSSLV-NGYIWLMR 59 Query: 67 GTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 GTPL++Q+ I++ LP I G+ F + I++ LN+SAY +EI R+ I SI +GQ++ Sbjct: 60 GTPLMLQMLFIYFALPFIPVVGVRLPDFPSAILAFVLNYSAYFAEIFRAGIQSIDRGQYE 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 + +GL+ QT+R I+LPQ + P+S+E I+++K TS+ + + ++ + A+ IV Sbjct: 120 GAQVLGLSYPQTMRRIVLPQVLKRILPPMSNETITLVKDTSLIYVLAMNDLLRAARGIVQ 179 Query: 184 TTYQPLIIYCELAFVYLILT 203 + + AF YL +T Sbjct: 180 RDFTTMPFVVAAAF-YLFMT 198 >gi|229056201|ref|ZP_04195627.1| Amino acid ABC transproter, permease [Bacillus cereus AH603] gi|228721135|gb|EEL72667.1| Amino acid ABC transproter, permease [Bacillus cereus AH603] Length = 230 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 125/220 (56%), Gaps = 4/220 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + I ++P LL A IV TL + S V +IG A RI ++ I++ I H Y+ I Sbjct: 2 FEIFISTYPTLLKATIV-TLQLTLTSLVFGSLIGLLFAFFRIS-NNKILNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGN 178 Query: 186 YQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQHTYSV 224 +Q L Y + YL L F Y++ + + + T SV Sbjct: 179 FQQLDTYIIVGVYYLALVLLFTYLVSLLEKRLQRKETNSV 218 >gi|190404349|ref|YP_001960980.1| rcorf5 [Agrobacterium rhizogenes] gi|158322145|gb|ABW33562.1| rcorf5 [Agrobacterium rhizogenes] Length = 255 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 74/229 (32%), Positives = 127/229 (55%), Gaps = 22/229 (9%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVW 63 L+ PQL+YA + +T+ + S + +I G F+A+ F ++ + F YVW Sbjct: 10 ELVFSPPPQLIYA-VWLTVSVTLTSMAVGIIAGLFLAL----FGLSLYGALRGFNWLYVW 64 Query: 64 IFRGTPLLVQLFVIFYGLPH-IGI-------------VFDSFVAIIISLTLNFSAYISEI 109 FRGTP+LVQLF+I++GLP+ IG+ + + VA I + +L+ +AY+SEI Sbjct: 65 FFRGTPILVQLFLIYFGLPYLIGVDIFPSTITTPAFSISGAIVAGIFAFSLHEAAYMSEI 124 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R+ I S+ KGQ +A+ A+G+ +R IILPQ + L ++ + K+T+ S I Sbjct: 125 TRAGIRSVEKGQSEAAQALGMLPSLAMRRIILPQALRIILPSLGNQCNMMFKTTAFLSVI 184 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 +PE+ A + S ++ +Y ++ YL+LT ++Q IE+ ++ Sbjct: 185 AVPELVHVADSLRSQNFKTFEVYAAISVYYLVLTGVWTVLQQWIENRLS 233 >gi|323698838|ref|ZP_08110750.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323458770|gb|EGB14635.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 216 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F +I P+L+ A TL I+ +S +I +IG + R F ++ + YV F Sbjct: 4 FTIIWGHIPELMVGAWR-TLWISFVSIIIGFVIGHLLCFGR-FSEHRLLKRSITAYVSFF 61 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQL +IFY LP GI S A II+L++N +A+ SEI+R S+P GQ +A+ Sbjct: 62 RGTPLLVQLAIIFYFLPLFGIFIPSVAAAIIALSMNTAAFQSEILRGGFQSMPHGQIEAA 121 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GLT Q HI +PQ + L +E I ILK++++ STI + ++ + +Q + STT Sbjct: 122 RDLGLTTWQIRLHIQIPQVFRATLPALVNESIDILKNSALISTIAVTDLMRISQTLASTT 181 Query: 186 YQPLIIYCELAFVYLILT 203 ++P+ + +Y ++T Sbjct: 182 FRPIEFFLAAGAMYFVMT 199 >gi|300310827|ref|YP_003774919.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300073612|gb|ADJ63011.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 231 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 121/201 (60%), Gaps = 3/201 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M+Y++ F I QLL A++ T+ ++ +S + L +G F A+I I S L + Sbjct: 1 MQYDFQFAFIFQHLDQLLVGALL-TIRLSALSMICGLAVGIFGAIISIHGSKPA-RLAVT 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TP LVQLF+IF+GLP IG+ D+ +A ++++T+N AY +EI+R+ +++I Sbjct: 59 SYVELIRSTPFLVQLFIIFFGLPSIGVQVDANIAALVAMTVNLGAYSTEIVRAGMMAIHP 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q +A+ A+ +TR Q IRH++L + L+S+F ++ ++S+ S I+ E+ TA Sbjct: 119 SQIEAAQALAMTRWQVIRHVVLTPALEKVYPALASQFTLMMLASSIVSAISAEELTATAN 178 Query: 180 RIVSTTYQPLIIYCELAFVYL 200 + + T++ IY + +Y+ Sbjct: 179 LLDAETFRSFEIYLVVMVLYI 199 >gi|150375847|ref|YP_001312443.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Sinorhizobium medicae WSM419] gi|150030394|gb|ABR62510.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuD [Sinorhizobium medicae WSM419] Length = 220 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 109/187 (58%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + P L+ + +T+ + V++ +IG A++R+ + I+ F Sbjct: 1 MEWDW-EFVRQIMPTLI-EGLKITILATALGAVVAAVIGLVFAILRMT-APKPIARATSF 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V RGTPLLVQL+ IFY LP +GI + VA +I L +++ Y +E+ R+ I ++P+G Sbjct: 58 IVEFIRGTPLLVQLYFIFYVLPDVGIRLPALVAGVIGLGIHYGTYAAEVYRAGIENVPRG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A LT +QT H+ILPQ I L++ I++ K T + S IT+ E+ A+ Sbjct: 118 QWEAAKATNLTARQTWIHVILPQAIPPMIPALANYLIAMFKETPLLSAITVLELMNQAKS 177 Query: 181 IVSTTYQ 187 I ++ Y+ Sbjct: 178 IANSNYR 184 >gi|282881858|ref|ZP_06290509.1| probable amino-acid ABC transporter permease protein [Peptoniphilus lacrimalis 315-B] gi|300814772|ref|ZP_07095020.1| ABC transporter, permease protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|281298267|gb|EFA90712.1| probable amino-acid ABC transporter permease protein [Peptoniphilus lacrimalis 315-B] gi|300511159|gb|EFK38411.1| ABC transporter, permease protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 240 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/183 (34%), Positives = 105/183 (57%), Gaps = 9/183 (4%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF--------FSDTIISLIMHFYVWI 64 + L + + TL I+ ++ + LIIG IR F +++L++ Y+ + Sbjct: 11 YKPLFFNGTLNTLKISIVATIFGLIIGLITGTIRTLPKKNGFGGFLQKVVNLLISAYITL 70 Query: 65 FRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTP++VQ ++FYG P +G+ D + I +++N AY+SE++R IISI KGQW+ Sbjct: 71 FRGTPMMVQASLLFYGFPLFLGVDVDKILTAYIIVSVNTGAYMSEVVRGGIISIDKGQWE 130 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AS A GL+ QT+ ++I PQT+ +EF+ +K TSV + I + E+F A+ + Sbjct: 131 ASRASGLSHIQTMLYVIGPQTLRNILPATGNEFVINIKDTSVLNVIGVGELFFAAKTVAG 190 Query: 184 TTY 186 +Y Sbjct: 191 QSY 193 >gi|89099965|ref|ZP_01172836.1| amino acid ABC transporter, permease protein [Bacillus sp. NRRL B-14911] gi|89085357|gb|EAR64487.1| amino acid ABC transporter, permease protein [Bacillus sp. NRRL B-14911] Length = 214 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 77/200 (38%), Positives = 116/200 (58%), Gaps = 9/200 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW--- 63 ++ I++ P +L+A + +T I V+ L+ GF I +I F + I + +W Sbjct: 2 DIFIEALP-VLWAGLKLTAYIT----VLGLLFGFIIGLITALFRLSPIPPLRWIAIWFIN 56 Query: 64 IFRGTPLLVQLFVIFYGLPHIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTP LVQLF I++GL + I + A I+ + +N AYI+EIIR+ I SI KGQ Sbjct: 57 LVRGTPFLVQLFFIYFGLNSLSFISLEPVTAGIVGVAINAGAYIAEIIRAGIQSIDKGQT 116 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ +GLT QT+R+IILPQ + ++ I LK TS+ S I I E+ Q Q +V Sbjct: 117 EAARTLGLTSTQTMRYIILPQALRRMLPTFVNQAIISLKDTSLLSVIGIAELTQRGQVVV 176 Query: 183 STTYQPLIIYCELAFVYLIL 202 S TY+P I+ +A +Y IL Sbjct: 177 SATYEPFKIWGMVALMYFIL 196 >gi|307727762|ref|YP_003910975.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307588287|gb|ADN61684.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 218 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/168 (35%), Positives = 102/168 (60%), Gaps = 6/168 (3%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I+ YV +F+GTPLL+QLF+ F+GLP +G+ +VA ++LTL SAY+ +I R + + Sbjct: 52 IVVLYVEVFQGTPLLMQLFLAFFGLPLVGVDVSPWVAATVTLTLYTSAYLVDIWRGCVEA 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQW A ++G+T Q +R+I+ PQ + + P + ++KST++AS I E+ + Sbjct: 112 VPRGQWAAGASLGMTFGQQLRYIVWPQALKIAVAPTVGFLVQVVKSTALASIIGFTELTK 171 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIESSVTQH 220 T I + ++P IY +A +Y LT + +++ + + V QH Sbjct: 172 TGTMITNAAFRPFPIYGMVAMIYFAMCFPLTWYARVLEKR--NKVGQH 217 >gi|254471177|ref|ZP_05084579.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062] gi|211959323|gb|EEA94521.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062] Length = 324 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/211 (35%), Positives = 115/211 (54%), Gaps = 3/211 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWI 64 F I P LL TL ++ IS ISL F + S ++ + FY Sbjct: 108 FEFIGRKLPFLLGTGAFTTLYVSAIS--ISLAFAFALMGATAKLSGIGVVEGVGAFYTSY 165 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRG PLLVQLF+I+ GLP IG V A II+L+L + AY++EI RS I SI GQW+A Sbjct: 166 FRGVPLLVQLFLIYLGLPQIGYVISPVPAAIIALSLVYGAYMTEIFRSGIQSISVGQWEA 225 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+GL R T R +ILPQ + P ++FI++LK +S+ S + + +I A+ + Sbjct: 226 ADALGLQRLLTFRKVILPQAMRVIVPPTGNQFIAMLKDSSLVSVVGVWDIMFIARTQGRS 285 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 ++ L + + +Y +++ +Q +IE+ Sbjct: 286 DFKILEMLITASIIYWVMSVMLEFVQQRIEN 316 >gi|168187335|ref|ZP_02621970.1| amino acid ABC transporter, permease protein [Clostridium botulinum C str. Eklund] gi|169294769|gb|EDS76902.1| amino acid ABC transporter, permease protein [Clostridium botulinum C str. Eklund] Length = 232 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/195 (34%), Positives = 116/195 (59%), Gaps = 15/195 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 +T+ ++ I+ + S I+G A++++ I+++I + ++ I RGTPLLVQ+++ +YG Sbjct: 21 ITIVLSLITVIFSSILGTIFALMKLS-KIKILNIISNVFIEIVRGTPLLVQVYIFYYGIP 79 Query: 81 ---------LPHIGIVFDSFVA---IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 LP I I+ + F I+I+L LN +AY++EIIRS I S+ KGQ +A+ ++ Sbjct: 80 TLLQNAGVELPQIDIMGNDFTGLCMIVITLALNSTAYVAEIIRSGIESVNKGQMEAARSL 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT +R++I+PQ I L +EFI+++K +S+ S + I E+ + AQ T + Sbjct: 140 GLTHGMAMRYVIIPQAIKNILPALGNEFITVIKESSIVSIVGIKELMRNAQAASGATLKI 199 Query: 189 LIIYCELAFVYLILT 203 Y A +Y ILT Sbjct: 200 FTPYLTAAAMYFILT 214 >gi|90962414|ref|YP_536330.1| glutamine transport system permease protein [Lactobacillus salivarius UCC118] gi|90821608|gb|ABE00247.1| Glutamine transport system permease protein [Lactobacillus salivarius UCC118] Length = 217 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 122/211 (57%), Gaps = 13/211 (6%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W NL + L + VTL ++ IS V+S IIG + VIR + +S + F + Sbjct: 8 YSWINL------RFLLEGLWVTLEVSVISIVLSFIIGLILGVIR-YVKIKYLSAAVGFLI 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP +G+ +A + +L + SA ++EI+RS I ++P GQ Sbjct: 61 DIIRNLPLLLIIFFTYFGLPELGLRMTPMLAAVTALVVFESAMLAEIVRSGIQAVPVGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + GLT Q + HII+PQ + PL S+FIS++K TS+A+ I +PE+ AQ I Sbjct: 121 EGARSSGLTYVQAMWHIIMPQALQKMIPPLVSQFISLVKDTSLATIIVLPELLYHAQIIY 180 Query: 183 S--TTYQPLIIYCELAFVYLILTSFCYIIQI 211 S TTY + +Y +A +Y I+ CY + + Sbjct: 181 SQNTTYM-VPMYLMIAVMYFIV---CYCLSL 207 >gi|322385682|ref|ZP_08059326.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] gi|321270420|gb|EFX53336.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] Length = 724 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 68/219 (31%), Positives = 126/219 (57%), Gaps = 9/219 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + L+ +++ QLL + + +T+ +A ISF I+++IG + + + +I +V + Sbjct: 507 WGLLQNNYKQLL-SGLGITIALALISFAIAMVIGIIFGMFSVS-PIKALRIISEIFVDVI 564 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RG PL++ IF+G+P++ + FVA I+L+LN AYI+EI+R I ++P Sbjct: 565 RGIPLMILAAFIFWGIPNLLESMTGQQSPINDFVAGTIALSLNAGAYIAEIVRGGIQAVP 624 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+FQT Sbjct: 625 VGQMEASRSLGISYGKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLVELFQTG 684 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + I++ YQ +Y LA +YL++ + + ++E + Sbjct: 685 KIIIARNYQSFKMYAILAVLYLVIITLLTRLAKRLEKRI 723 >gi|320547997|ref|ZP_08042278.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] gi|320447343|gb|EFW88105.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] Length = 523 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 113/202 (55%), Gaps = 11/202 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF--FSDTIISLIMHFYVW------ 63 ++ Q L A VTL I+ I V+ L IG I V R ++ ++ + + W Sbjct: 291 NWSQFLRGA-GVTLLISIIGTVVGLFIGLLIGVFRTAPKAANKFLAGLQKAFGWLLSVYI 349 Query: 64 -IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 IFRGTP++VQ VI+YG GI D +A I +++N AY+SEI+R I ++ KGQ Sbjct: 350 EIFRGTPMIVQAMVIYYGTAQAFGISIDRTIAAIFIVSINTGAYMSEIVRGGIFAVDKGQ 409 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++A+ A+G T QT+R I+LPQ + +EF+ +K TSV + I++ E++ + + Sbjct: 410 FEAATALGFTHAQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTV 469 Query: 182 VSTTYQPLIIYCELAFVYLILT 203 + TYQ + +A +Y +LT Sbjct: 470 ATQTYQYFQTFTIIAIIYFVLT 491 >gi|256847978|ref|ZP_05553422.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus coleohominis 101-4-CHN] gi|256715038|gb|EEU30015.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus coleohominis 101-4-CHN] Length = 215 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 55/162 (33%), Positives = 98/162 (60%), Gaps = 5/162 (3%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ FYVW+ RGTPLL+QL +FYGLP +GIVF F A +++ LN++AY +EI R + S Sbjct: 52 VLEFYVWLMRGTPLLLQLIFVFYGLPIVGIVFQRFDAALVAFILNYAAYFAEIFRGGLQS 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ++ + +GL+ QT+R I++PQ + + +E ++++K +S+ I + ++ + Sbjct: 112 IDEGQYEGARVLGLSYWQTVRKIVIPQVVKIVIPSIGNEVVNLVKDSSLVYVIGLGDLLR 171 Query: 177 TAQRIVS--TTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 + T PL++ + +YL++ C I K+E Sbjct: 172 AGNVATARDVTLVPLVL---VGIIYLLMVGICTYILHKVEQR 210 >gi|329724901|gb|EGG61404.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU144] Length = 487 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/195 (33%), Positives = 114/195 (58%), Gaps = 2/195 (1%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I + I T+ I+ + V+ I+G FIA+++I + LI Y+ RGTP Sbjct: 274 ISKYGNFFIKGIKNTILISLVGVVLGSILGSFIALLKIS-KIRPLQLIASIYIEFLRGTP 332 Query: 70 LLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +LVQ+F++F+G +G+ + + I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++ Sbjct: 333 MLVQVFIVFFGTTAALGLDISALICGTIALVINSSAYIAEIIRAGINAVDKGQTEAARSL 392 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL +QT++ +++PQ I L +EF++++K +S+ STI + EI AQ + ++ P Sbjct: 393 GLNYRQTMQSVVMPQAIKKILPALGNEFVTLIKESSIVSTIGVSEIMFNAQVVQGISFDP 452 Query: 189 LIIYCELAFVYLILT 203 A +Y +LT Sbjct: 453 FTPLLVAALLYFLLT 467 >gi|313885015|ref|ZP_07818767.1| ABC transporter, permease protein [Eremococcus coleocola ACS-139-V-Col8] gi|312619706|gb|EFR31143.1| ABC transporter, permease protein [Eremococcus coleocola ACS-139-V-Col8] Length = 483 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/184 (34%), Positives = 112/184 (60%), Gaps = 3/184 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 +F + +FP L+ + TL +S +I+ I+G + +++ ++ I+ + Y+ I Sbjct: 270 FFGQLTQNFPALM-VGLGKTLMATILSLIIAFILGTLLGLMKASHNN-ILRGVSTVYIDI 327 Query: 65 FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RG PLLV F I++G+P + GI F + +A +++L LN +AY++EI+R + SI +GQ + Sbjct: 328 MRGLPLLVLAFFIYFGIPQMTGIKFSNLIAGVLTLGLNAAAYVAEIVRGGVQSIAQGQME 387 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A ++GL+RK T++ I+LPQ ++F+ LK TS+ S I + E+ QT + I++ Sbjct: 388 AGRSLGLSRKTTMKKIVLPQAFKIMLPSFINQFVITLKDTSILSVIGMVELTQTGRIIIA 447 Query: 184 TTYQ 187 TYQ Sbjct: 448 RTYQ 451 >gi|332362128|gb|EGJ39930.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK49] Length = 729 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 118/210 (56%), Gaps = 8/210 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L + VT+ +A ISF I+++IG + + + I +V + RG PL++ Sbjct: 520 QELLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPL-RWIAEIFVDVIRGIPLMIVA 578 Query: 75 FVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 IF+G+P++ ++FVA I+L+LN AYI+EI+R I ++P GQ +AS + Sbjct: 579 AFIFWGIPNLIESMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRS 638 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ +T+R IILPQ ++F+ LK T++ S I + E+F+T + I++ YQ Sbjct: 639 LGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQ 698 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +Y LA +YLI+ + + ++E + Sbjct: 699 SFRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|328946378|gb|EGG40519.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1087] Length = 729 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 118/210 (56%), Gaps = 8/210 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L + VT+ +A ISF I+++IG + + + I +V + RG PL++ Sbjct: 520 QELLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPL-RWIAEIFVDVIRGIPLMIVA 578 Query: 75 FVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 IF+G+P++ ++FVA I+L+LN AYI+EI+R I ++P GQ +AS + Sbjct: 579 AFIFWGIPNLIESMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRS 638 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ +T+R IILPQ ++F+ LK T++ S I + E+F+T + I++ YQ Sbjct: 639 LGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQ 698 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +Y LA +YLI+ + + ++E + Sbjct: 699 SFRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|260430643|ref|ZP_05784615.1| L-cystine transport system permease protein TcyL [Silicibacter lacuscaerulensis ITI-1157] gi|260418084|gb|EEX11342.1| L-cystine transport system permease protein TcyL [Silicibacter lacuscaerulensis ITI-1157] Length = 224 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/174 (36%), Positives = 103/174 (59%), Gaps = 7/174 (4%) Query: 44 VIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTL 100 V R+ D ++ L + F FRGTPLLVQLF+ +YGLP + D A I+ LTL Sbjct: 46 VFRVPVLDQLVLLFISF----FRGTPLLVQLFLFYYGLPQVMSFLTAIDGVTAAIMGLTL 101 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 +F+AY++E IR++II + + QW+A+ +IG+T+ Q +R +ILPQ +A L + FI ++ Sbjct: 102 HFAAYMAETIRAAIIGVDRSQWEAAQSIGMTQGQMMRRVILPQAARVAAPTLVNYFIDMI 161 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 K TS+A T+ + E+ AQ+ + ++ + +A +Y I+ Q +E Sbjct: 162 KGTSLAFTLGVTEMMGAAQKEAAGSFLYFEAFLVVAVIYWIMVEGLSQAQRALE 215 >gi|225575188|ref|ZP_03783798.1| hypothetical protein RUMHYD_03277 [Blautia hydrogenotrophica DSM 10507] gi|225037596|gb|EEG47842.1| hypothetical protein RUMHYD_03277 [Blautia hydrogenotrophica DSM 10507] Length = 229 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/224 (30%), Positives = 126/224 (56%), Gaps = 21/224 (9%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHFYV 62 N + D + + + VTL + ++ +I +++G F+A++R + T I++ I + Y+ Sbjct: 11 NFVTDDRWKYITDGLKVTLEVTFLAVLIGILLGLFVAIVRSTYDKTHKLKILNFICNIYI 70 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDS------FVAIIISLTLNFSAYISEIIRSSIIS 116 + RGTP++VQL +I++ +VF S FVA++ + +N AY++EI RS I+S Sbjct: 71 TVIRGTPVVVQLLIIYF------VVFASMDVSKVFVAVM-AFGMNSGAYVAEIFRSGIMS 123 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ++A ++G QT+ HII+PQ L +EFI +LK TSVA I + ++ + Sbjct: 124 IDQGQFEAGRSLGFNYAQTMVHIIMPQAFKNVLPALGNEFIVLLKETSVAGYIALQDLTK 183 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLIL----TSFCYIIQIKIESS 216 I S TY + +A +YL++ T +++ ++ +S Sbjct: 184 GGDIIRSRTYDAFMPLIAVALIYLVMVMIFTKLVALLERRLRNS 227 >gi|330833059|ref|YP_004401884.1| amino acid (glutamine) ABC transporter permease [Streptococcus suis ST3] gi|329307282|gb|AEB81698.1| amino acid (glutamine) ABC transporter, permease protein [Streptococcus suis ST3] Length = 213 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 122/211 (57%), Gaps = 5/211 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIG-FFIAVIRIFFSDTIISLIMHFYVWIF 65 + +++ P LL A V+L + + ++SL +G F +++I F + ++HFYV I Sbjct: 2 DYVLEVLPSLLNGA-AVSLQVFFLVLILSLPLGAVFAFLMQIKFKP--LQWLLHFYVLIM 58 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLL+QL ++Y LP +GI+FD A+I++ TLN++AY SEI R I +IPKGQ++A+ Sbjct: 59 RGTPLLLQLIFVYYVLPSVGIIFDRMPAVILAFTLNYAAYFSEIFRGGIEAIPKGQYEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 + T QTIR+I+LPQ + + +E ++++K TS+ + + ++ A R + Sbjct: 119 KVLKFTPVQTIRYIVLPQVVKIVLPSVFNEVMTLVKDTSLVYALGVSDLL-LASRTAANR 177 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 L +YL++ +I ++E Sbjct: 178 DASLAPMFIAGAIYLLMIGAVTLISKQVEKK 208 >gi|332361030|gb|EGJ38834.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1056] Length = 729 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 118/210 (56%), Gaps = 8/210 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L + VT+ +A ISF I+++IG + + + I +V + RG PL++ Sbjct: 520 QELLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPL-RWIAEIFVDVIRGIPLMIVA 578 Query: 75 FVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 IF+G+P++ ++FVA I+L+LN AYI+EI+R I ++P GQ +AS + Sbjct: 579 AFIFWGIPNLIESMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRS 638 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ +T+R IILPQ ++F+ LK T++ S I + E+F+T + I++ YQ Sbjct: 639 LGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQ 698 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +Y LA +YLI+ + + ++E + Sbjct: 699 SFRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|300310828|ref|YP_003774920.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300073613|gb|ADJ63012.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 216 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 72/197 (36%), Positives = 117/197 (59%), Gaps = 5/197 (2%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D+F LL AA TL ++ ++F+ I GF +A++R + L+ Y+ I +GTP+ Sbjct: 8 DNFVFLLEAA-RWTLLLSALAFLGGGIAGFIVALMRTSHLAPL-RLLSAVYIQIIQGTPV 65 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L+ LF+ FYGL G VA I++T+ SAY+ EI R I ++P QW+AS A+ + Sbjct: 66 LILLFLSFYGLAIFGYKLPPMVAATIAMTIYSSAYLGEIWRGCIEAVPVPQWEASTALAM 125 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 TR Q +R++ILPQ + S P + I+K+TS+AS I + E+ Q + + + T+QP + Sbjct: 126 TRWQQLRYVILPQAVRISLPPTVGFLVQIVKNTSIASIIGLVELAQAGKLVSNATFQPFL 185 Query: 191 IYCELAFVYLILTSFCY 207 ++ +A +Y + FCY Sbjct: 186 VFPIVAGIYFV---FCY 199 >gi|228919496|ref|ZP_04082860.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840139|gb|EEM85416.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 214 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 103/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A I+ V+S IIG I ++R + ++S ++ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVIGILR-YTKIPVVSQVLGVIVELIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|42779788|ref|NP_977035.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|42735705|gb|AAS39643.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] Length = 214 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/163 (38%), Positives = 103/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + ++S I+ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILR-YMKIPVVSQILGILVEVVRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITATIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 H+ILPQ + PL S+FIS+LK T++A I++PE+ AQ Sbjct: 134 WHVILPQALRRMVPPLVSQFISLLKDTALAVVISLPELIHNAQ 176 >gi|152997696|ref|YP_001342531.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas sp. MWYL1] gi|150838620|gb|ABR72596.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas sp. MWYL1] Length = 315 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 126/202 (62%), Gaps = 8/202 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +V+TL ++ +S V +++IG F + RI ++ + + Y+ + RGTPLLVQ+F+ ++ Sbjct: 116 GLVMTLQLSVVSLVFAVVIGLFAGLARIS-TNPALRYLSVTYIELIRGTPLLVQIFIFYF 174 Query: 80 GLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 IG V D F A + +L++ AYI+EI+RS I SI GQ +A+ ++G+ Q + Sbjct: 175 ---FIGTVLDLDRFTAGVAALSVFTGAYIAEIVRSGIQSISPGQMEAARSLGMNYVQAMV 231 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 ++ILPQ + P++ +FI+++K +S+ S I+I ++ + + +VS+T+ P ++ +A Sbjct: 232 NVILPQAFKRTLPPMAGQFINLIKDSSLVSVISITDLTKAGREVVSSTFAPFEVWFAVAL 291 Query: 198 VYLILT-SFCYIIQIKIESSVT 218 +YL+LT + IQ ++E ++ Sbjct: 292 MYLVLTGGLSWAIQ-RLEKRLS 312 >gi|295694800|ref|YP_003588038.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus tusciae DSM 2912] gi|295410402|gb|ADG04894.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus tusciae DSM 2912] Length = 224 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/187 (37%), Positives = 110/187 (58%), Gaps = 7/187 (3%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L + TL + + V+ ++G A+ R+ S I+ + YV IFRGTPLLVQ+F Sbjct: 13 MLIKGLGYTLEYSLYAVVLGTVLGLIFALFRLSGSR-ILRALGTVYVDIFRGTPLLVQIF 71 Query: 76 VIFYGLPHIGIV---FDSFVAIIISLTL---NFSAYISEIIRSSIISIPKGQWDASYAIG 129 I++GLP + + F F ++ N AYI+EIIR+ I+S+ KGQW+A+ +IG Sbjct: 72 FIYFGLPQVLPLHQWFGEFYTVLAGAAALALNEGAYITEIIRAGILSVDKGQWEAAESIG 131 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 +T Q +R+IILPQ PL ++FI +K TS+ S I+I E+ + AQ ++ TTY L Sbjct: 132 MTSYQKMRYIILPQAFKRMIPPLVNQFIQTIKDTSLLSVISITELVRAAQIVIVTTYFAL 191 Query: 190 IIYCELA 196 + +A Sbjct: 192 QFWTAVA 198 >gi|220932710|ref|YP_002509618.1| polar amino acid ABC transporter, inner membrane subunit [Halothermothrix orenii H 168] gi|219994020|gb|ACL70623.1| polar amino acid ABC transporter, inner membrane subunit [Halothermothrix orenii H 168] Length = 222 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 74/202 (36%), Positives = 117/202 (57%), Gaps = 2/202 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 ++ L+I S P L+ + VT+ + +S V I+G + + +++ IS + Y+ Sbjct: 3 DFIQLVIQSLPDLI-KGLQVTMLLTLVSIVFGFILGIILIIGKLY-GFKFISWLCTSYIE 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I RGTPLLVQLF+++YGLP GI A II +LN +AY +E +R SI S+ +GQ Sbjct: 61 IIRGTPLLVQLFILYYGLPPYGIKLTPLTAAIIGFSLNSAAYQAEYLRGSIKSVSEGQLR 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG+ + Q I +++LPQ + ++EFI +LK TS+A I PE+ A+ + S Sbjct: 121 AAYSIGMGKWQGIFYVVLPQALIKVIPSWTNEFIYLLKYTSLAYIIGAPEMMAQAKLLAS 180 Query: 184 TTYQPLIIYCELAFVYLILTSF 205 Y+ Y A +YLI+ F Sbjct: 181 RNYEYFKTYLVAAGIYLIVVLF 202 >gi|324994617|gb|EGC26530.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK678] gi|327462473|gb|EGF08797.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1] gi|327474328|gb|EGF19734.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK408] gi|327489715|gb|EGF21505.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1058] Length = 729 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 118/210 (56%), Gaps = 8/210 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L + VT+ +A ISF I+++IG + + + I +V + RG PL++ Sbjct: 520 QELLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPL-RWIAEIFVDVIRGIPLMIVA 578 Query: 75 FVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 IF+G+P++ ++FVA I+L+LN AYI+EI+R I ++P GQ +AS + Sbjct: 579 AFIFWGIPNLIESMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRS 638 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ +T+R IILPQ ++F+ LK T++ S I + E+F+T + I++ YQ Sbjct: 639 LGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQ 698 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +Y LA +YLI+ + + ++E + Sbjct: 699 SFRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|255281311|ref|ZP_05345866.1| amino acid ABC transporter, amino acid-binding/permease protein [Bryantella formatexigens DSM 14469] gi|255268268|gb|EET61473.1| amino acid ABC transporter, amino acid-binding/permease protein [Bryantella formatexigens DSM 14469] Length = 230 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/226 (33%), Positives = 133/226 (58%), Gaps = 13/226 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I+ ++ LL+ +TL I+ ++ ++ LI G +A +RI S + S I YV RGT Sbjct: 7 ILSTYRVLLWNGTKITLLISVMTIILGLICGTLMAFMRISKSPVLRS-IAAAYVEFIRGT 65 Query: 69 PLLVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIP 118 P+LVQ+F+++YGLP +GI S ++ ++L++N +AYI EI+RS I SI Sbjct: 66 PVLVQIFIVYYGLPMMGIEIPSIMFGGVDISRLLSGTVALSVNSTAYICEIVRSGIQSID 125 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ + + A+GL ++ + ++ILPQ I L++EF++++K++S S I I E+ A Sbjct: 126 IGQTEGAMALGLNGRRRMWYVILPQAIKNIIPALANEFVTVIKTSSQVSVIGIAELMYAA 185 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQHTYS 223 I +++P+ +A +Y I+T S +I+ +IE ++ + + S Sbjct: 186 DTIRGISFRPMEPLLIVAVIYFIITFSLSCVIR-RIEKNMRRSSRS 230 >gi|296103260|ref|YP_003613406.1| glutamine ABC transporter permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057719|gb|ADF62457.1| glutamine ABC transporter permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 219 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 126/219 (57%), Gaps = 5/219 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P LL A +TL I+ + V LIIG R + I + I Sbjct: 1 MQFDW-SAIWPAIPLLLEGA-KMTLWISVLGLVGGLIIGLVAGFARTY-GGWIANHIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEVIRGTPIVVQVMFIYFALPMAFTDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R++TIRH+ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFSEAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 Q I++ ++ L I+ +A VYLI+T + ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVVYLIITLVLSFVLRRLERRM 216 >gi|239616532|ref|YP_002939854.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga olearia TBF 19.5.1] gi|239505363|gb|ACR78850.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga olearia TBF 19.5.1] Length = 206 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 58/155 (37%), Positives = 95/155 (61%) Query: 49 FSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISE 108 + I I+ Y +FR PLLV LF+IFYG P I + F F A I+ L L +AY S+ Sbjct: 26 YGGRIAKGIIVVYERLFRSIPLLVILFLIFYGFPKINVRFSPFTACILGLGLRSAAYQSQ 85 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I R +I S+ + Q A+ ++G++R Q RH++LPQ + + ++EF +LK +S+A Sbjct: 86 IFRGAIQSVSETQMRAARSLGMSRLQGFRHVVLPQALRIALPGWTNEFTIVLKDSSLAYA 145 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + E+ + I+ST Y+P++IY +A +YL++T Sbjct: 146 LGVTELLRQGGYIISTKYEPMLIYLSVAVIYLVIT 180 >gi|118444342|ref|YP_877030.1| amino acid ABC transporter permease [Clostridium novyi NT] gi|118134798|gb|ABK61842.1| amino acid ABC transporter, permease protein [Clostridium novyi NT] Length = 232 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 67/195 (34%), Positives = 115/195 (58%), Gaps = 15/195 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 +T+ ++ I+ + S I+G A++++ I+ +I + ++ I RGTPLLVQ+++ +YG Sbjct: 21 ITIVLSLITVIFSSILGTIFALMKLS-KIKILKVISNVFIEIVRGTPLLVQVYIFYYGIP 79 Query: 81 ---------LPHIGIVFDSFVA---IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 LP I ++ + F I+I+L LN +AY++EIIRS I S+ KGQ +A+ ++ Sbjct: 80 TLLQNAGVELPQIDVMGNDFTGLCMIVITLALNSTAYVAEIIRSGIESVNKGQMEAARSL 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT + +R++I+PQ I L +EFI+++K +S+ S + I E+ + AQ T Sbjct: 140 GLTHRMAMRYVIIPQAIKNILPALGNEFITVIKESSIVSVVGIKELMRNAQAASGATMMI 199 Query: 189 LIIYCELAFVYLILT 203 Y A +Y ILT Sbjct: 200 FTPYLTAAAMYFILT 214 >gi|315638191|ref|ZP_07893373.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter upsaliensis JV21] gi|315481727|gb|EFU72349.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter upsaliensis JV21] Length = 250 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 116/198 (58%), Gaps = 14/198 (7%) Query: 15 QLLYAAIVVTLPIACISFVISLI---IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 Q + TL ++ ++ +I+++ IG +A +I ++ YV IF+ TPL+ Sbjct: 42 QTFMDGFIYTLQVSVLALLIAVVFGTIGGVMATSKI----AVLRAYTRIYVEIFQNTPLV 97 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +Q+F ++YGLPH+GI D F ++ + AY+SE++RS I+++PKGQ++AS + G T Sbjct: 98 IQIFFLYYGLPHLGINLDLFTIGVLGIGAYHGAYVSEVVRSGILAVPKGQFEASASQGFT 157 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST--TYQPL 189 Q +R+II+PQTI P+S++ I+++K+TSV + E+ TA + Y P Sbjct: 158 YTQQMRYIIVPQTIKIILPPMSNQMINLIKNTSVLLIVGGVELMSTADSYAADYGNYAPA 217 Query: 190 IIYCELAFVYLILTSFCY 207 I+ AF+Y I+ CY Sbjct: 218 YIFA--AFLYFIV---CY 230 >gi|239616534|ref|YP_002939856.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga olearia TBF 19.5.1] gi|239505365|gb|ACR78852.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga olearia TBF 19.5.1] Length = 224 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/189 (36%), Positives = 111/189 (58%), Gaps = 2/189 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 +P+ L + VTL + IS V +IG +A+ R++ + ++ I + + RGTPLLV Sbjct: 13 WPEFL-RGLGVTLEMTLISVVAGFLIGILLALARVY-GNALLKGIATVIIEVIRGTPLLV 70 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF+++YGLP G+ A +I ++N AY +E +RS+I SI Q A+ ++G+T+ Sbjct: 71 QLFILYYGLPPYGVSLTPLTAALIGFSINSGAYQAEYLRSAINSIQHTQMLAARSLGMTK 130 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 Q I +IILPQ + ++EFI +LK TS+A + PE+ A+ I S +Q +Y Sbjct: 131 WQAIFNIILPQALRRVIPAWANEFIYLLKYTSLAYIVGAPELMAKAKFIASRNFQFFEVY 190 Query: 193 CELAFVYLI 201 +A +YLI Sbjct: 191 LVVALIYLI 199 >gi|323529954|ref|YP_004232106.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323386956|gb|ADX59046.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 218 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/168 (35%), Positives = 102/168 (60%), Gaps = 6/168 (3%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I+ YV +F+GTPLL+QLF+ F+GLP +G+ +VA ++LTL SAY+ +I R + + Sbjct: 52 IVVLYVEVFQGTPLLMQLFLAFFGLPLVGVDVSPWVAATVTLTLYTSAYLVDIWRGCVEA 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQW A ++G+T Q +R+I+ PQ + + P + ++KST++AS I E+ + Sbjct: 112 VPRGQWAAGASLGMTFSQQLRYIVWPQALKIAVAPTVGFLVQVVKSTALASIIGFTELTK 171 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIESSVTQH 220 T I + ++P IY +A +Y LT + +++ + + V QH Sbjct: 172 TGTMITNAAFRPFPIYGMVAMIYFAMCFPLTWYARVLEKR--NKVGQH 217 >gi|311106238|ref|YP_003979091.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 9 [Achromobacter xylosoxidans A8] gi|310760927|gb|ADP16376.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 9 [Achromobacter xylosoxidans A8] Length = 217 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 64/184 (34%), Positives = 113/184 (61%), Gaps = 5/184 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + I+ +++ +G +A++RI + S +++ Y+W+ RGTPL++Q+ I++ LP Sbjct: 17 VTLTLFFITLALAVPLGLVLALVRIS-KWRLASNLVNGYIWLMRGTPLMLQMLFIYFALP 75 Query: 83 H---IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 IGI F A +++ LN++AY +EI R+ I S+ +GQ++ S +G+T QT+R I Sbjct: 76 FVPVIGIRLPDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEGSKVLGMTYLQTLRRI 135 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + P+S+E I+++K TS+ + + +I +TA+ IV + AF Y Sbjct: 136 VLPQMVQRVLPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAAAF-Y 194 Query: 200 LILT 203 LI+T Sbjct: 195 LIMT 198 >gi|16262711|ref|NP_435504.1| ABC transporter, permease [Sinorhizobium meliloti 1021] gi|307312873|ref|ZP_07592502.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|14523337|gb|AAK64916.1| ABC transporter, permease [Sinorhizobium meliloti 1021] gi|306899387|gb|EFN30020.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 227 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/217 (32%), Positives = 124/217 (57%), Gaps = 14/217 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++ D+ P++L IV+T + +S I +I + ++RI +S FY ++FR Sbjct: 4 GIVFDAIPRML-GGIVMTFQLLLLSLAIGTMIAVLLLLMRIS-GRWWLSWPAQFYTYVFR 61 Query: 67 GTPLLVQLFVIFYGLPHIG---------IVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 GTP+LVQ+F+++YGLP I+ D F I++L+LN AY+SEI R ++++ Sbjct: 62 GTPILVQIFIVYYGLPQFEWIRESIFWPILRDPFGCAILALSLNTGAYLSEIFRGGVLAV 121 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 +G +A A+G++ +I P I + +E IS++KST++ASTIT+ ++ Sbjct: 122 ERGLLEAGAALGMSATHRFIYITTPLAIRIALPAYGNEVISLMKSTALASTITLVDMTGI 181 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + IV+ T+ P ++ LA VY+ +T +IIQ ++ Sbjct: 182 GRTIVAETFAPYQVFLSLAIVYVAIT---WIIQRSVK 215 >gi|330817216|ref|YP_004360921.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia gladioli BSR3] gi|327369609|gb|AEA60965.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia gladioli BSR3] Length = 218 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/184 (35%), Positives = 111/184 (60%), Gaps = 2/184 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D P LL AIV T+ I SFV+S +IG A++R+ + ++S + + RG Sbjct: 6 LLDFLPILLKGAIV-TVEITVCSFVLSTLIGLAFALMRVS-PNRLLSGGAAAVINVIRGL 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P++VQLF I++ LP +G+ +F A I L + +SAY +E R+ I +I +GQ +A+ +I Sbjct: 64 PIIVQLFYIYFVLPDLGVQLSAFQAGCIGLGIAYSAYQAENFRAGIEAIDRGQIEAAQSI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+ +R ++LPQ + P + + +LK +S+ASTIT+ E+ + Q I S+T+Q Sbjct: 124 GMRGAMIMRRVVLPQAFRIALPPYGNTLVMMLKDSSLASTITVAEMTRAGQLIASSTFQN 183 Query: 189 LIIY 192 + +Y Sbjct: 184 MTVY 187 >gi|288550086|ref|ZP_05969253.2| glutamine ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] gi|288316709|gb|EFC55647.1| glutamine ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] Length = 232 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 72/220 (32%), Positives = 126/220 (57%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P LL A +TL I+ + V LIIG R + I + I Sbjct: 14 MQFDW-SAIWPAIPLLLEGA-KMTLWISVLGLVGGLIIGLVAGFARTY-GGWIANHIALV 70 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 71 FIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIH 130 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R++TIRH+ILP + PL +++I +K TS+ I + E+ + Sbjct: 131 KGFSEAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 190 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A VYLI+T + ++E + Sbjct: 191 QEIIAGNFRALEIWSAVAVVYLIITLVLSFVLRRLERRMK 230 >gi|222082285|ref|YP_002541650.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726964|gb|ACM30053.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 224 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 121/204 (59%), Gaps = 1/204 (0%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I + LL+ A TL ++ ++ ++S+IIG +A++R S + Y+ + R TP Sbjct: 10 IREYLPLLWDAAYTTLYLSVLAIILSVIIGCGLAIMRRSQSR-FARFVAVAYIEVMRNTP 68 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LLV L+++++ LP +G+ F SF A I LTLN + Y++EIIR+ +++I GQ++A+ A G Sbjct: 69 LLVILYIVYFALPAMGLRFSSFAAASIGLTLNSAGYMAEIIRAGLVAIAHGQFEAARAQG 128 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 QT RHIIL Q PL ++ I+++ ++S+AS + + ++ Q + ST+++ Sbjct: 129 FNPVQTYRHIILQQVFRVIYAPLGNQVIAVILASSLASAVAVEDVASWMQTVGSTSFRFF 188 Query: 190 IIYCELAFVYLILTSFCYIIQIKI 213 + A VYL+L +I++ I Sbjct: 189 ETFLVAAAVYLVLCQTVNLIRLAI 212 >gi|209547236|ref|YP_002279154.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538480|gb|ACI58414.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 318 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 123/223 (55%), Gaps = 24/223 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F ++ + + V+L + ++ +I ++G +AV R+ D + S + ++W FRGTPLLV Sbjct: 65 FDPVVVSGLYVSLGLTVVAMIIGTVLGLLLAVARMS-KDHLASSLASLFIWFFRGTPLLV 123 Query: 73 QLFVIFY------------GLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIR 111 QL IF+ G+P G F S+ A I L LN SAY++EIIR Sbjct: 124 QL--IFWYNLSTLFPTLSIGIPFFGPTFASWDTNSVISPMTAAIAGLALNESAYMAEIIR 181 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++S+ KGQ++ + A G+TR + +R II+PQ + + P ++ IS++K+TS+ S I + Sbjct: 182 GGLLSVDKGQFETAEAFGMTRARALRRIIIPQAMRSIVPPTGNQLISMIKATSLVSVIAM 241 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 ++ + Q I + T++ + + YL++TS I Q IE Sbjct: 242 ADLLYSVQSIYNRTFEVIPMLLVAVTWYLLITSVLNIGQSYIE 284 >gi|160879005|ref|YP_001557973.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium phytofermentans ISDg] gi|160427671|gb|ABX41234.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium phytofermentans ISDg] Length = 235 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 119/212 (56%), Gaps = 19/212 (8%) Query: 3 YEWF--NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISL 56 Y+ F N I D+ L ++ TL I + +I ++GF IA+IR +S T +++ Sbjct: 11 YQRFVSNFIEDNRYMYLVRGLITTLVITFFAVMIGALLGFIIAIIRSTYSKTGKLRVLNF 70 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS------FVAIIISLTLNFSAYISEII 110 + + Y+ + RGTP++VQL +I++ ++F S FVA++ + LN AY+SEI+ Sbjct: 71 LCNIYITVIRGTPVVVQLLIIYF------VIFGSVNINKIFVAVL-AFGLNSGAYVSEIV 123 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 RS I+S+ +GQ++A ++G QT+R IILPQ I L +EFI +LK TSV I Sbjct: 124 RSGIMSVDEGQFEAGRSLGFNYNQTMRLIILPQAIKNILPALGNEFIVLLKETSVCGFIA 183 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + ++ + I TY + +A +YL L Sbjct: 184 LEDLTKAGDIIRGRTYDAFMPLIAVALIYLTL 215 >gi|301299235|ref|ZP_07205522.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300215037|gb|ADJ79453.1| Glutamine transport system permease protein [Lactobacillus salivarius CECT 5713] gi|300853195|gb|EFK80792.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 217 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 76/211 (36%), Positives = 122/211 (57%), Gaps = 13/211 (6%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W NL + L + VTL ++ IS V+S IIG + VIR + +S + F + Sbjct: 8 YSWINL------RFLLEGLWVTLEVSVISIVLSFIIGLILGVIR-YVKIKYLSAAVGFLI 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP +G+ +A + +L + SA ++EI+RS I ++P GQ Sbjct: 61 DIIRNLPLLLIIFFTYFGLPELGLRMTPMLAAVTALVVFESAMLAEIVRSGIQAVPVGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + GLT Q + HII+PQ + PL S+FIS++K TS+A+ I +PE+ AQ I Sbjct: 121 EGARSSGLTYVQAMWHIIMPQALQKMIPPLVSQFISLVKDTSLATIIVLPELLYHAQIIY 180 Query: 183 S--TTYQPLIIYCELAFVYLILTSFCYIIQI 211 S TTY + +Y +A +Y ++ CY + + Sbjct: 181 SQNTTYM-VPMYLMIAVMYFVV---CYCLSL 207 >gi|38233733|ref|NP_939500.1| ABC transporter [Corynebacterium diphtheriae NCTC 13129] gi|38199994|emb|CAE49663.1| Putative ABC transport system membrane protein [Corynebacterium diphtheriae] Length = 314 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 126/223 (56%), Gaps = 27/223 (12%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + +A V TL I +S ++ +++G +A++R+ + ++ I FY+WIFRGTP+ V Sbjct: 51 FDTRIASAAVHTLAITILSMLMGVVLGCIVAIMRMS-PNPVLRGISWFYLWIFRGTPVYV 109 Query: 73 QLFVIFYGLPHIGIVFDS-----------------FVAIIISLTLNFSAYISEIIRSSII 115 QL +F+GL +G ++ F+ ++ L LN +AY+SEI+RS I Sbjct: 110 QL--VFWGL--LGSIYSGINLGFTEISLENLLSNMFILAVVGLGLNEAAYMSEIVRSGIQ 165 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP--- 172 ++P+GQ +AS A+G++ TIR +LPQ + P +EFIS+LK+TS+ + IP Sbjct: 166 AVPEGQTEASKALGMSWWMTIRRTVLPQAMRIIVPPTGNEFISLLKTTSL--VVAIPYTS 223 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 E++ A I + + P+ + A YL++TS + Q +E Sbjct: 224 ELYGRATDIAAALFDPVPLLLVAATWYLVITSLLMVAQHYLEK 266 >gi|33601772|ref|NP_889332.1| putative ABC transporter permease protein [Bordetella bronchiseptica RB50] gi|33576209|emb|CAE33288.1| putative ABC transporter permease protein [Bordetella bronchiseptica RB50] Length = 217 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 64/184 (34%), Positives = 113/184 (61%), Gaps = 5/184 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + I+ +++ +G +A+ RI ++S +++ Y+W+ RGTPL++QL I++ LP Sbjct: 17 VTLTLFFITLALAVPLGLVLALARIS-RWRLLSRLVNGYIWLMRGTPLMLQLLFIYFALP 75 Query: 83 HI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + GI F A +++ LN++AY +EI R+ I S+ +GQ++ S +G+T QT+R I Sbjct: 76 FVPVVGIRLPDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEGSKVLGMTYLQTMRRI 135 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + P+S+E I+++K TS+ + + +I +TA+ IV + AF Y Sbjct: 136 VLPQMVQRVLPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAAAF-Y 194 Query: 200 LILT 203 LI+T Sbjct: 195 LIMT 198 >gi|330977203|gb|EGH77160.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 155 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 53/104 (50%), Positives = 73/104 (70%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 ++ I YV FRGTPLLVQLFVI+YGLP +GI + A +I +LN +AY EI+R++ Sbjct: 52 VNWIARIYVSFFRGTPLLVQLFVIYYGLPELGIQLEPLSAALIGFSLNMAAYACEILRAA 111 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 I S+ +GQW+A+ +IG+TR QT+R ILPQ T+ PL + FI Sbjct: 112 ISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNSFI 155 >gi|324992737|gb|EGC24657.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK405] Length = 729 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 118/210 (56%), Gaps = 8/210 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L + VT+ +A ISF I+++IG + + + I +V + RG PL++ Sbjct: 520 QELLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPL-RWIAEIFVDVIRGIPLMIVA 578 Query: 75 FVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 IF+G+P++ ++FVA I+L+LN AYI+EI+R I ++P GQ +AS + Sbjct: 579 AFIFWGIPNLIESMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRS 638 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ +T+R IILPQ ++F+ LK T++ S I + E+F+T + I++ YQ Sbjct: 639 LGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQ 698 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +Y LA +YLI+ + + ++E + Sbjct: 699 SFRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|317472313|ref|ZP_07931641.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Anaerostipes sp. 3_2_56FAA] gi|316900270|gb|EFV22256.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Anaerostipes sp. 3_2_56FAA] Length = 219 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/168 (35%), Positives = 106/168 (63%), Gaps = 1/168 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+ +TL I + V+S++IGF +++R ++ +++ I+ Y+ + R TPLL+QLF ++Y Sbjct: 16 AMKLTLGIGALGVVLSVVIGFLCSMVR-YYRVPVLNRIVGIYIELSRNTPLLIQLFFLYY 74 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP IGI ++FV +I LT ++Y+SE R + ++ K Q ++ +IGLT+ Q +R+I Sbjct: 75 GLPKIGIKLNAFVIAVIGLTFLGASYMSEAFRGGLEAVNKIQEESGLSIGLTKPQLMRYI 134 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 ILPQ + + + + I +LK TSV S I + ++ A+ ++ Y+ Sbjct: 135 ILPQALAIAMPSVGANVIFLLKETSVFSAIALADLMFVAKDLIGMYYK 182 >gi|229148980|ref|ZP_04277225.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus m1550] gi|228634520|gb|EEK91104.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus m1550] Length = 214 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 103/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + ++S ++ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILR-YTKIPVVSQVLGVIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|227517777|ref|ZP_03947826.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|227554922|ref|ZP_03984969.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|229546661|ref|ZP_04435386.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|229548747|ref|ZP_04437472.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|293383501|ref|ZP_06629412.1| amino acid ABC transporter, permease protein [Enterococcus faecalis R712] gi|293386673|ref|ZP_06631247.1| amino acid ABC transporter, permease protein [Enterococcus faecalis S613] gi|294779832|ref|ZP_06745218.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|300859984|ref|ZP_07106072.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|307270135|ref|ZP_07551452.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|307271415|ref|ZP_07552689.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|307276212|ref|ZP_07557342.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|307284361|ref|ZP_07564526.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|312901656|ref|ZP_07760926.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|312905049|ref|ZP_07764174.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|312907119|ref|ZP_07766112.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|312951823|ref|ZP_07770714.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|312979302|ref|ZP_07791000.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|227074774|gb|EEI12737.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|227175948|gb|EEI56920.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|229306140|gb|EEN72136.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|229308228|gb|EEN74215.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|291079135|gb|EFE16499.1| amino acid ABC transporter, permease protein [Enterococcus faecalis R712] gi|291083890|gb|EFE20853.1| amino acid ABC transporter, permease protein [Enterococcus faecalis S613] gi|294453106|gb|EFG21522.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|300850802|gb|EFK78551.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|306503301|gb|EFM72553.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|306507124|gb|EFM76264.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|306511910|gb|EFM80906.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|306513504|gb|EFM82119.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|310626896|gb|EFQ10179.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|310630226|gb|EFQ13509.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|310631628|gb|EFQ14911.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|311287896|gb|EFQ66452.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|311291267|gb|EFQ69823.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|315027598|gb|EFT39530.1| ABC transporter, permease protein [Enterococcus faecalis TX2137] gi|315030507|gb|EFT42439.1| ABC transporter, permease protein [Enterococcus faecalis TX4000] gi|315031301|gb|EFT43233.1| ABC transporter, permease protein [Enterococcus faecalis TX0017] gi|315035305|gb|EFT47237.1| ABC transporter, permease protein [Enterococcus faecalis TX0027] gi|315145197|gb|EFT89213.1| ABC transporter, permease protein [Enterococcus faecalis TX2141] gi|315148312|gb|EFT92328.1| ABC transporter, permease protein [Enterococcus faecalis TX4244] gi|315151625|gb|EFT95641.1| ABC transporter, permease protein [Enterococcus faecalis TX0012] gi|315154250|gb|EFT98266.1| ABC transporter, permease protein [Enterococcus faecalis TX0031] gi|315154877|gb|EFT98893.1| ABC transporter, permease protein [Enterococcus faecalis TX0043] gi|315159961|gb|EFU03978.1| ABC transporter, permease protein [Enterococcus faecalis TX0312] gi|315161884|gb|EFU05901.1| ABC transporter, permease protein [Enterococcus faecalis TX0645] gi|315166987|gb|EFU11004.1| ABC transporter, permease protein [Enterococcus faecalis TX1341] gi|315170860|gb|EFU14877.1| ABC transporter, permease protein [Enterococcus faecalis TX1342] gi|315172709|gb|EFU16726.1| ABC transporter, permease protein [Enterococcus faecalis TX1346] gi|315573427|gb|EFU85618.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B] gi|315576571|gb|EFU88762.1| ABC transporter, permease protein [Enterococcus faecalis TX0630] gi|315581345|gb|EFU93536.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A] gi|323479998|gb|ADX79437.1| amino acid ABC transporter, permease protein [Enterococcus faecalis 62] gi|327534392|gb|AEA93226.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis OG1RF] gi|329577681|gb|EGG59109.1| ABC transporter, permease protein [Enterococcus faecalis TX1467] Length = 214 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 58/159 (36%), Positives = 99/159 (62%), Gaps = 1/159 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +++ Y+W+ RGTPLL+QL +FYGLP IGIVF+ + A + + LN++AY +EI R I + Sbjct: 51 LINLYIWLMRGTPLLLQLIFVFYGLPLIGIVFERYDAALFAFILNYAAYFAEIFRGGIQA 110 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQ++A+ + LTR QT+ IILPQ + + +E I+++K TS+ + + ++ + Sbjct: 111 IPQGQYEAAKVLRLTRFQTVTRIILPQVVKIVLPSVGNEIINLVKDTSLIYVLGLGDLLR 170 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 A +I + L+ + +YL+ T+ + KIE Sbjct: 171 -AGKIAMSRDVTLVPLALVGVIYLLFTAILTVASKKIEK 208 >gi|134291670|ref|YP_001115439.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia vietnamiensis G4] gi|134134859|gb|ABO59184.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia vietnamiensis G4] Length = 216 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 65/199 (32%), Positives = 115/199 (57%), Gaps = 7/199 (3%) Query: 12 SFPQLLYAAIVV---TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 SF Q+L ++ T+ ++ +SF+ I+G + V+R+ S ++ Y+ +F+GT Sbjct: 5 SFGQILANLLLAARWTVVLSIVSFLSGGIVGLAVLVMRVSGSR-LLRGCAKVYIEVFQGT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF++F+GLP +G +VA LT SAY++EI R + ++PKGQW+AS ++ Sbjct: 64 PLLMQLFIVFFGLPLLGFDVPPWVAATAGLTFFTSAYLAEIWRGCVEAVPKGQWEASASL 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 ++ + +RH+ILPQ + P + +K T++ S I E+ + I + T++P Sbjct: 124 AMSYVEQLRHVILPQAARIAVAPTVGFGVQAVKDTALVSIIGFTELTKAGIAISNATFRP 183 Query: 189 LIIYCELAFVYLILTSFCY 207 ++Y +A +Y L CY Sbjct: 184 FVVYGLVALIYFAL---CY 199 >gi|168207981|ref|ZP_02633986.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens E str. JGS1987] gi|182627284|ref|ZP_02954973.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens D str. JGS1721] gi|170660732|gb|EDT13415.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens E str. JGS1987] gi|177907297|gb|EDT70025.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens D str. JGS1721] Length = 213 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 65/173 (37%), Positives = 108/173 (62%), Gaps = 2/173 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N II P ++ + TL + ++ ++S+ +G +A++R+ + I++ I YV + R Sbjct: 2 NYIITLMPSII-EGLKNTLGVFILTLLLSIPLGIIVAILRLS-NIKIVNFISSLYVLVMR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL IF+GLP IG+ D F A II+ TLN++AY EI RS I I KGQ++AS Sbjct: 60 GTPLLLQLIFIFFGLPIIGVSIDRFPAAIIAFTLNYAAYFGEIFRSGIKDIDKGQFEASK 119 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +GL++ T + IILPQ+ + +++E I+++K TS+ + I E+ + + Sbjct: 120 ILGLSKWFTFKKIILPQSFKKTLPSIANEVITLVKDTSLVYVVGIGELLRAGK 172 >gi|315151111|gb|EFT95127.1| ABC transporter, permease protein [Enterococcus faecalis TX0012] Length = 546 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 111/209 (53%), Gaps = 12/209 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----------FFSDTIIS 55 F I + + + +TL IA I ++ +G I V R FF + + Sbjct: 306 FKNIWNQYGDMFLRGAGLTLFIALIGTIVGTTLGLLIGVFRTIPDSENPVARFFQ-KLGN 364 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 LI+ Y+ +FRGTP++VQ VIFYGL GI D VA + +++N AY+SEI+R I Sbjct: 365 LILSIYIEVFRGTPMMVQAMVIFYGLALAFGISLDRTVAALFIVSVNTGAYMSEIVRGGI 424 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ KGQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++ Sbjct: 425 FAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADL 484 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 F +Q + + +YL++T Sbjct: 485 FFQGNAASGANFQFFQTFTIVGIMYLVMT 513 >gi|227891536|ref|ZP_04009341.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] gi|227866683|gb|EEJ74104.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] Length = 217 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 76/211 (36%), Positives = 122/211 (57%), Gaps = 13/211 (6%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W NL + L + VTL ++ IS V+S IIG + VIR + +S + F + Sbjct: 8 YSWINL------RFLLEGLWVTLEVSVISIVLSFIIGLVLGVIR-YVKIKYLSAAVGFLI 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP +G+ +A + +L + SA ++EI+RS I ++P GQ Sbjct: 61 DIIRNLPLLLIIFFTYFGLPELGLRMTPMLAAVTALVVFESAMLAEIVRSGIQAVPVGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + GLT Q + HII+PQ + PL S+FIS++K TS+A+ I +PE+ AQ I Sbjct: 121 EGARSSGLTYVQAMWHIIMPQALQKMIPPLVSQFISLVKDTSLATIIVLPELLYHAQIIY 180 Query: 183 S--TTYQPLIIYCELAFVYLILTSFCYIIQI 211 S TTY + +Y +A +Y ++ CY + + Sbjct: 181 SQNTTYM-VPMYLMIAVMYFVV---CYCLSL 207 >gi|242279196|ref|YP_002991325.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242122090|gb|ACS79786.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 260 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 67/184 (36%), Positives = 110/184 (59%), Gaps = 2/184 (1%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 IVVT + S +LIIG F + RI S+ I+L+ YV + RG PLLVQLF I+Y Sbjct: 60 GIVVTFEVTICSIFGALIIGLFTGLGRIS-SNKFINLVASTYVEVVRGIPLLVQLFYIYY 118 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + + V D AII ++++ + AY+ E+ R+ I SI GQ +A+ ++G +K+T+ + Sbjct: 119 AMGRVLQVPDMLSAII-AMSVCYGAYMGEVFRAGIESIDDGQTEAARSLGFNKKETMFLV 177 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ T P+ +EFI++LK +S+ S + + +I + + + ++Q Y +A VY Sbjct: 178 ILPQAWRTILPPVGNEFIALLKDSSLVSILAVADILRRGREFAAESFQYFETYTMIALVY 237 Query: 200 LILT 203 L++T Sbjct: 238 LLIT 241 >gi|94990274|ref|YP_598374.1| cystine transport system permease protein [Streptococcus pyogenes MGAS10270] gi|94543782|gb|ABF33830.1| Cystine transport system permease protein [Streptococcus pyogenes MGAS10270] Length = 216 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 57/147 (38%), Positives = 95/147 (64%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +I ++ Y+ I RG P++V LFV+++GLP+ G+ + + + ++ +AYISE+ RS Sbjct: 49 LIHYLVRAYISIMRGVPMIVVLFVLYFGLPYYGLELPALLCAYLGFSMVSAAYISEVFRS 108 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 SI +I KGQW+A+ A+GL +R IILPQ + PL + I ++KS+S+A+ IT+P Sbjct: 109 SIEAIDKGQWEAAKALGLPYALMVRKIILPQAFRIAVPPLGNVIIDMVKSSSLAAMITVP 168 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVY 199 +IFQ A+ I + + +Y +AF+Y Sbjct: 169 DIFQNAKIIGGREWDYMSMYILVAFIY 195 >gi|296535456|ref|ZP_06897646.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296264215|gb|EFH10650.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 229 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 61/168 (36%), Positives = 98/168 (58%), Gaps = 2/168 (1%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y W+FRGTPLLVQL VI+ LP G+ A ++ L+LN +AY+SE +R+ I ++PKG Sbjct: 61 YCWLFRGTPLLVQLLVIYTALPLFGLRLSVPAAALLGLSLNEAAYLSETVRAGIQAVPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+GL Q R +I PQ + PL + +LK+TSVAS I++ E+ + Q Sbjct: 121 QREAALALGLRGVQAFRLVIWPQALRIIIPPLGNSVNGLLKTTSVASVISMDELLRRTQI 180 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH--TYSVDK 226 ++ + L ++ A YL++T+ + Q +E + T + D+ Sbjct: 181 LIQERFLVLELFAVAALYYLLMTTAWDLAQRGLERRFGRGHATEAADR 228 >gi|294497134|ref|YP_003560834.1| glutamine ABC transporter permease GlnP [Bacillus megaterium QM B1551] gi|294347071|gb|ADE67400.1| glutamine ABC transporter, permease protein GlnP [Bacillus megaterium QM B1551] Length = 216 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 74/193 (38%), Positives = 116/193 (60%), Gaps = 2/193 (1%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL +A IS V+S +IG + ++R + ++S ++ F V I R PLL+ +F ++ LP Sbjct: 21 VTLKVAFISIVLSFLIGSIVGILR-YARIPVLSHVLAFVVEIIRNLPLLLIIFFTYFALP 79 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 IGI + A I++LT+ SA ISEIIRS + SI KGQ +A+ + GL QT+R ++LP Sbjct: 80 EIGIDMEITSAAIVALTVFESAMISEIIRSGLKSIEKGQIEAARSSGLNYYQTLRFVVLP 139 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI-IYCELAFVYLI 201 Q + PL S+FIS+LK TS+A I +P++ AQ I ++ ++ +A +Y I Sbjct: 140 QALRRMVPPLVSQFISLLKDTSLAVVIALPDLLHNAQIIYGQKQSYVVPMFLIIAMMYFI 199 Query: 202 LTSFCYIIQIKIE 214 + II ++E Sbjct: 200 VNYALSIIARRLE 212 >gi|326315799|ref|YP_004233471.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372635|gb|ADX44904.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 217 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 119/201 (59%), Gaps = 5/201 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + I+ V+++ +G +A+ R+ ++S +++ Y+W+ RGTPL++Q+ I++ LP Sbjct: 17 VTLKLFAITLVLAVPLGLALALARVS-RWGLLSGLVNGYIWLMRGTPLMLQMLFIYFALP 75 Query: 83 H---IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 IG+ F A +++ LN++AY +EI R+ I SI +GQ++A+ +G+T QT+R I Sbjct: 76 FVPVIGVRLPDFPAAVVAFALNYAAYFAEIFRAGIQSIDRGQYEAAKVLGMTYGQTMRRI 135 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + P+S+E I+++K TS+ + + ++ + A+ IV + AF Y Sbjct: 136 VLPQMVRRILPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDFTTTPFLVAAAF-Y 194 Query: 200 LILTSFCYIIQIKIESSVTQH 220 L++T ++E +H Sbjct: 195 LVMTLVLTWGFQRLERRYARH 215 >gi|168215245|ref|ZP_02640870.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens CPE str. F4969] gi|170713367|gb|EDT25549.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens CPE str. F4969] Length = 213 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 65/173 (37%), Positives = 108/173 (62%), Gaps = 2/173 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N II P ++ + TL + ++ ++S+ +G +A++R+ + I++ I YV + R Sbjct: 2 NYIITLMPSII-EGLKNTLGVFILTLLLSIPLGIIVAILRLS-NIKIVNFISSLYVLVMR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL IF+GLP IG+ D F A II+ TLN++AY EI RS I I KGQ++AS Sbjct: 60 GTPLLLQLIFIFFGLPIIGVSIDRFPAAIIAFTLNYAAYFGEIFRSGIKDIDKGQFEASK 119 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +GL++ T + IILPQ+ + +++E I+++K TS+ + I E+ + + Sbjct: 120 ILGLSKWFTFKKIILPQSFKKTLPSIANEVITLVKDTSLVYVVGIGELLRAGK 172 >gi|312883097|ref|ZP_07742828.1| ABC transporter ATP-binding/permease protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309369257|gb|EFP96778.1| ABC transporter ATP-binding/permease protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 264 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 124/209 (59%), Gaps = 4/209 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 +P L + VT+ I+ IS + +L+IG A++R+ S + I YV + R TPLLV Sbjct: 55 WPAELIDGLTVTIKISMISLLFTLLIGMVTALLRLS-SSRVGRGIALLYVELIRNTPLLV 113 Query: 73 QLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 Q++++++ P IG+ D F I++L L AY +E+ R+ + SIPKGQ++A+ ++GL Sbjct: 114 QIYLLYFVFGPIIGL--DRFTTAIVALALFQGAYTAEVFRAGLNSIPKGQYEAAKSLGLN 171 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 R T +ILPQ I + PL++E +S++K++S+ S + I ++ A+ IVS T P I Sbjct: 172 RFFTFYDVILPQVIQRTLPPLANEVVSLVKNSSIVSVMAIFDLTTEARNIVSETAMPFEI 231 Query: 192 YCELAFVYLILTSFCYIIQIKIESSVTQH 220 + +A +YL LT + +E+ + H Sbjct: 232 WFTVAAIYLGLTLTLSAVSSILETKLGSH 260 >gi|300791008|ref|YP_003771299.1| polar amino acid ABC transporter permease [Amycolatopsis mediterranei U32] gi|299800522|gb|ADJ50897.1| permease component of ABC-type amino acid transport system [Amycolatopsis mediterranei U32] Length = 315 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 79/218 (36%), Positives = 121/218 (55%), Gaps = 23/218 (10%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV-IFYGLP 82 TL + IS +I ++ G +AV+R+ + + S Y+W+FRGTPL+ QL + F GL Sbjct: 78 TLILTVISMLIGIVGGILLAVMRLS-PNPLTSGAAAIYIWLFRGTPLITQLIIWNFLGLA 136 Query: 83 H----IGIVFD-------------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 + +GI F F A ++ L LN +AY++EI+R I S+ GQ +A+ Sbjct: 137 YSRIGLGIPFGPTFVSWDTNLLITQFTASLLGLGLNEAAYMAEIVRGGIQSVDSGQLEAA 196 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G++R +T+R IILPQ + P +E IS+LK+TS+ I E+ AQ I S Sbjct: 197 SALGMSRTRTLRRIILPQAMRVIIPPTGNETISMLKTTSLVVAIGYFELMVAAQTIYSQN 256 Query: 186 YQ--PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + PL+I A YL +TS +IQI+IE ++ T Sbjct: 257 LKTVPLLIVA--ALWYLFMTSVLTVIQIQIEKRFSRGT 292 >gi|116252666|ref|YP_768504.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115257314|emb|CAK08409.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 220 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 67/196 (34%), Positives = 109/196 (55%), Gaps = 9/196 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EW L++ A+V T ++ +F ++ + G +++ + S + YV Sbjct: 14 EWLPLLLR--------AMVNTALLSICAFALAFVFGLLLSLCQKS-SFAALRYFAALYVT 64 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I RG PLL LF++++GLP IG+VFD+F A I L L F+A ++E+ R+ + +IP GQ + Sbjct: 65 IMRGVPLLAVLFLLYFGLPGIGVVFDAFGAAIAGLALCFAAQVAELFRAGLKAIPAGQSE 124 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A G T Q+ IILPQ P+ F+S+LK +S+AS IT+ E+ T + + + Sbjct: 125 AALAAGFTPAQSFVWIILPQVARVILAPMIITFVSLLKDSSLASLITVDELVLTGRSMAT 184 Query: 184 TTYQPLIIYCELAFVY 199 + PL IY + Y Sbjct: 185 EYFLPLQIYVAVGLCY 200 >gi|29375395|ref|NP_814549.1| amino acid ABC transporter, permease protein [Enterococcus faecalis V583] gi|255971263|ref|ZP_05421849.1| amino acid ABC transporter, permease [Enterococcus faecalis T1] gi|255973883|ref|ZP_05424469.1| ABC-type amino acid transport system [Enterococcus faecalis T2] gi|256617691|ref|ZP_05474537.1| ABC-type amino acid transport system [Enterococcus faecalis ATCC 4200] gi|256761568|ref|ZP_05502148.1| amino acid ABC transporter, permease [Enterococcus faecalis T3] gi|256854333|ref|ZP_05559697.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256957329|ref|ZP_05561500.1| ABC-type amino acid transport system [Enterococcus faecalis DS5] gi|256959935|ref|ZP_05564106.1| ABC-type amino acid transporter [Enterococcus faecalis Merz96] gi|256964361|ref|ZP_05568532.1| ABC-type amino acid transporter [Enterococcus faecalis HIP11704] gi|257077675|ref|ZP_05572036.1| ABC-type amino acid transporter [Enterococcus faecalis JH1] gi|257081063|ref|ZP_05575424.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol] gi|257086160|ref|ZP_05580521.1| ABC-type amino acid transport system [Enterococcus faecalis D6] gi|257089233|ref|ZP_05583594.1| ABC amino acid transporter permease [Enterococcus faecalis CH188] gi|257415374|ref|ZP_05592368.1| ABC-type amino acid transport system [Enterococcus faecalis AR01/DG] gi|257418408|ref|ZP_05595402.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|257421057|ref|ZP_05598047.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|29342855|gb|AAO80619.1| amino acid ABC transporter, permease protein [Enterococcus faecalis V583] gi|255962281|gb|EET94757.1| amino acid ABC transporter, permease [Enterococcus faecalis T1] gi|255966755|gb|EET97377.1| ABC-type amino acid transport system [Enterococcus faecalis T2] gi|256597218|gb|EEU16394.1| ABC-type amino acid transport system [Enterococcus faecalis ATCC 4200] gi|256682819|gb|EEU22514.1| amino acid ABC transporter, permease [Enterococcus faecalis T3] gi|256709893|gb|EEU24937.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256947825|gb|EEU64457.1| ABC-type amino acid transport system [Enterococcus faecalis DS5] gi|256950431|gb|EEU67063.1| ABC-type amino acid transporter [Enterococcus faecalis Merz96] gi|256954857|gb|EEU71489.1| ABC-type amino acid transporter [Enterococcus faecalis HIP11704] gi|256985705|gb|EEU73007.1| ABC-type amino acid transporter [Enterococcus faecalis JH1] gi|256989093|gb|EEU76395.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol] gi|256994190|gb|EEU81492.1| ABC-type amino acid transport system [Enterococcus faecalis D6] gi|256998045|gb|EEU84565.1| ABC amino acid transporter permease [Enterococcus faecalis CH188] gi|257157202|gb|EEU87162.1| ABC-type amino acid transport system [Enterococcus faecalis ARO1/DG] gi|257160236|gb|EEU90196.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|257162881|gb|EEU92841.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|295113979|emb|CBL32616.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp. 7L76] Length = 213 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 58/159 (36%), Positives = 99/159 (62%), Gaps = 1/159 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +++ Y+W+ RGTPLL+QL +FYGLP IGIVF+ + A + + LN++AY +EI R I + Sbjct: 50 LINLYIWLMRGTPLLLQLIFVFYGLPLIGIVFERYDAALFAFILNYAAYFAEIFRGGIQA 109 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQ++A+ + LTR QT+ IILPQ + + +E I+++K TS+ + + ++ + Sbjct: 110 IPQGQYEAAKVLRLTRFQTVTRIILPQVVKIVLPSVGNEIINLVKDTSLIYVLGLGDLLR 169 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 A +I + L+ + +YL+ T+ + KIE Sbjct: 170 -AGKIAMSRDVTLVPLALVGVIYLLFTAILTVASKKIEK 207 >gi|319945586|ref|ZP_08019838.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus australis ATCC 700641] gi|319748185|gb|EFW00427.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus australis ATCC 700641] Length = 520 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 74/230 (32%), Positives = 120/230 (52%), Gaps = 11/230 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF--FSDTIISLIMHFY 61 + ++ D+ PQ L +TL I+ + LIIG I V R + ++ + F+ Sbjct: 280 QMMKILKDNGPQFLRG-TGMTLLISMTGTIAGLIIGLLIGVFRTAPTSKNKALAALQKFF 338 Query: 62 VW-------IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 W IFRGTP++VQ VIFYG I D A I +++N AY+SEI+R Sbjct: 339 GWFLNVYIEIFRGTPMIVQSMVIFYGSAQAFNISLDRTWAAIFIVSINTGAYMSEIVRGG 398 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I+++ GQ++A+ A+G+T QT+R ++LPQ + +EF+ +K TSV + I++ E Sbjct: 399 ILAVDTGQFEAATALGMTHGQTMRKVVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 ++ T + + YQ + +A +Y ILT I IE + TY+ Sbjct: 459 LYFTGNTVATQNYQYFPTFTIIAVIYFILTFTITRILRYIERRLDSDTYT 508 >gi|152969396|ref|YP_001334505.1| glutamine ABC transporter permease protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206580885|ref|YP_002239549.1| glutamine ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|238893864|ref|YP_002918598.1| glutamine ABC transporter permease protein [Klebsiella pneumoniae NTUH-K2044] gi|288936394|ref|YP_003440453.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|290510551|ref|ZP_06549921.1| glutamine ABC transporter permease [Klebsiella sp. 1_1_55] gi|330010080|ref|ZP_08306679.1| glutamine ABC transporter permease protein [Klebsiella sp. MS 92-3] gi|150954245|gb|ABR76275.1| glutamine ABC transporter permease component [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206569943|gb|ACI11719.1| glutamine ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|238546180|dbj|BAH62531.1| glutamine ABC transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288891103|gb|ADC59421.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] gi|289777267|gb|EFD85265.1| glutamine ABC transporter permease [Klebsiella sp. 1_1_55] gi|328534631|gb|EGF61205.1| glutamine ABC transporter permease protein [Klebsiella sp. MS 92-3] Length = 219 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 73/220 (33%), Positives = 125/220 (56%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P LL A +TL I+ + LIIG R F I + I Sbjct: 1 MQFDW-SAIWPAIPILLEGA-KMTLWISVLGLAGGLIIGLVAGFARCF-GGWIANHIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ I RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEIIRGTPIVVQVMFIYFALPMAFSDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R++TIRH+ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A +YLI+T I ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVIYLIITLVLSFILRRLERRMK 217 >gi|116695745|ref|YP_841321.1| ABC transporter permease [Ralstonia eutropha H16] gi|113530244|emb|CAJ96591.1| ABC-type transporter, permease component: PAAT family [Ralstonia eutropha H16] Length = 216 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 118/201 (58%), Gaps = 7/201 (3%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++ W +L ++L A TL + ++FV + GF +A+ R S ++ L Y Sbjct: 4 EFSWNHL------EILLLAARWTLWVTLLAFVGGTLAGFLVALARTSRSP-MLRLASTAY 56 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + + +GTP+L+ LF+ +YGL +G+ VA ++++++ SAY+ EI R I ++P+GQ Sbjct: 57 IQVVQGTPVLIVLFLSYYGLSVLGLKLSPMVAAMLAMSIYASAYLGEIWRGCIEAVPQGQ 116 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+AS A+ LTR Q +R+++LPQ + + P + ++K+TS+ S I + E+ + Q I Sbjct: 117 WEASEALALTRWQQLRYVVLPQAVRLALPPTVGFSVQLVKNTSITSIIGVIELTRAGQLI 176 Query: 182 VSTTYQPLIIYCELAFVYLIL 202 + T+QP ++ +A +Y L Sbjct: 177 NNATFQPFAVFVVVALIYFAL 197 >gi|257870153|ref|ZP_05649806.1| polar amino acid ABC transporter [Enterococcus gallinarum EG2] gi|257804317|gb|EEV33139.1| polar amino acid ABC transporter [Enterococcus gallinarum EG2] Length = 223 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 119/213 (55%), Gaps = 5/213 (2%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ +S P LL + TL IA SF+ +G + + + + + I+ Y+ RG Sbjct: 10 LMWESLPFLL-TGLSYTLGIAIASFLAGNALGLLLTFLGML-QNPWVRRIVRGYISFLRG 67 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 P LV LF++++GLP+ + A II +L SA+I EI R SI + +GQWDA+YA Sbjct: 68 VPALVLLFLLYFGLPY---QLPALTAAIICFSLTSSAFIGEIYRGSIAGVDRGQWDAAYA 124 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL+ +T+R IILPQ S LS+ + +LK TS+A+ ITIP+IFQ A+ + T+ Sbjct: 125 LGLSFSKTLRLIILPQAFRISVPALSNVAMDLLKGTSLAAMITIPDIFQKAKIVGGRTFD 184 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + +Y +A +Y +L +Q ++E Sbjct: 185 YMSMYVLVAIIYWLLCIGIEALQHRLEKRFADR 217 >gi|91787397|ref|YP_548349.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91696622|gb|ABE43451.1| amino acid ABC transporter membrane protein 2, PAAT family [Polaromonas sp. JS666] Length = 212 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 60/148 (40%), Positives = 93/148 (62%), Gaps = 3/148 (2%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +YV IF+GTPLL+QLF++++GL +G+ + V+ I LTL SAY++EI R + +I K Sbjct: 55 WYVQIFQGTPLLMQLFLVYFGLALMGMDTSALVSAAICLTLYASAYLTEIWRGCVNAIHK 114 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+AS ++ L+ Q +RH+ILPQ + P + I+K T++AS I E+ + Q Sbjct: 115 GQWEASTSLALSYTQQMRHVILPQAWRVAIAPTVGFLVQIIKGTALASVIGFVELTKAGQ 174 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCY 207 I + TYQP + + FV L+ + CY Sbjct: 175 MISNATYQPFLAF---TFVGLLYFALCY 199 >gi|28378896|ref|NP_785788.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|254557101|ref|YP_003063518.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum JDM1] gi|300769711|ref|ZP_07079594.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308181097|ref|YP_003925225.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28271733|emb|CAD64639.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|254046028|gb|ACT62821.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum JDM1] gi|300492754|gb|EFK27939.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046588|gb|ADN99131.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 213 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 120/209 (57%), Gaps = 7/209 (3%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ P LL A V+TL I + + SL +G + + + + + ++HFYVW+ RGT Sbjct: 4 ILEILPSLLSGA-VMTLKIFIWTLIGSLPLGLVVG-LGLMSNFKPLQWLLHFYVWLMRGT 61 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QL +FYGLP IGIVF + A + + LN++AY +EI R + SI GQ++++ + Sbjct: 62 PLLLQLIFVFYGLPLIGIVFPRYYAALFAFILNYAAYFAEIFRGGLQSIDNGQYESARVL 121 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTY 186 L+ QTIR I++PQ I + +E I+++K +S+ I + ++ + + T Sbjct: 122 RLSYWQTIRKIVIPQVIKIVLPSVGNEVINLVKDSSLVYVIGLGDLLRAGNVATARDVTL 181 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIES 215 PL++ + +YL LT+ + +IE Sbjct: 182 VPLVL---VGIIYLALTAVTTFVLGRIEK 207 >gi|239827640|ref|YP_002950264.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. WCH70] gi|239807933|gb|ACS24998.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. WCH70] Length = 219 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 128/225 (56%), Gaps = 23/225 (10%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTIISLIM 58 F+ I+ S P +L A I VTL I + ++ ++G +A+++I +F+D Sbjct: 5 FSQIVPSIPFIL-AGIAVTLKIVVFAVLLGFVLGVILALMKIGRMKVLTWFADA------ 57 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 Y +FRGTPL++QL +I++G+P + G+ D+F A +I+ LN +AY+SEIIR+ I+++ Sbjct: 58 --YTSVFRGTPLVLQLVLIYFGIPQLTGVEIDAFPAAVIAFGLNSAAYVSEIIRAGILAV 115 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ +A+ A+G+ K +R IILPQ + L +EFI++ K ++V + I ++ + Sbjct: 116 DKGQREAALALGVPYKLMMRDIILPQALKNILPALMNEFITLTKESAVVTVIGAMDVMRR 175 Query: 178 AQRIVSTTY---QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 A + Y +PL+I +Y +L ++ +E + + Sbjct: 176 AYIVGGQVYRYIEPLLIA---GLIYYVLVMLLTLLGKALEGRLRK 217 >gi|309777347|ref|ZP_07672308.1| amino acid ABC transporter, permease protein [Erysipelotrichaceae bacterium 3_1_53] gi|308914888|gb|EFP60667.1| amino acid ABC transporter, permease protein [Erysipelotrichaceae bacterium 3_1_53] Length = 213 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 116/197 (58%), Gaps = 5/197 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---DTIISLIMHFYVWIFR 66 +D F QLL A V L I +V++L F +A+ ++ + ++S I+ FY++I R Sbjct: 1 MDFFIQLL-PAFVEGLKITLFFWVVTLAGSFVLALPMVYIRLSRNAVVSSIVRFYIYIMR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL +++GLP++GI D A I++ LN++AY +EI+R + SI +GQ +A+ Sbjct: 60 GTPLLLQLMFVYFGLPYLGIRLDRMTAAILAFLLNYTAYFTEILRGGVQSIDEGQKEAAK 119 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +G + T HI+LPQ + +E +++LK T + S + I E+ + A +I + TY Sbjct: 120 ILGYSNAYTFLHILLPQALRNCIPSFINESLTLLKDTCLVSILGIDELLRYA-KIAAGTY 178 Query: 187 QPLIIYCELAFVYLILT 203 + + + +YL+L Sbjct: 179 ATGLPFIYVGVIYLVLN 195 >gi|207724231|ref|YP_002254628.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2] gi|206589447|emb|CAQ36408.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2] Length = 262 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 57/167 (34%), Positives = 96/167 (57%), Gaps = 6/167 (3%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 FY+W+ RGTPLLVQ+ +F LP + D F + ++L N AY +E IR+ ++++ Sbjct: 96 FYIWVIRGTPLLVQILFVFLALPAWLPWLQMDDFTSACVALAFNAGAYNAESIRAGLLAV 155 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKGQ +A++++GL+R T +I PQ + PL + FI++LK +S+A I + E+ Sbjct: 156 PKGQLEAAHSLGLSRWHTFADVIFPQAFKVALPPLVNNFIALLKDSSLAYAIGVVELTNV 215 Query: 178 AQRIVSTTYQPLIIYCELAFVYL----ILTSFCYIIQIKIESSVTQH 220 R+ + T+QPL A +YL +LT F ++ +++ Q Sbjct: 216 GNRLQAATFQPLPALVTTAVIYLALTTVLTQFSNAVEQRMDVEGRQR 262 >gi|323700540|ref|ZP_08112452.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323460472|gb|EGB16337.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 292 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 116/216 (53%), Gaps = 14/216 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF----- 78 T+ I S ++ LI+G AV+R+ + + Y+W+FRGTP+ +QL + F Sbjct: 59 TILITVCSMIVGLILGVVFAVMRLS-KNPVTRWFSGLYIWLFRGTPVYLQLLIWFNLALI 117 Query: 79 YGLPHIGI-------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 + + ++G V FVA + L LN AY++EI+RS I+S+ KGQ DA+ +G+T Sbjct: 118 FPIVNLGFAEYRMVDVMTPFVAALFGLGLNEGAYMTEIVRSGILSVDKGQVDAATTLGMT 177 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 R +R I+LPQ + P+ +EFI +LK++S+AS I E+ AQ I + + + Sbjct: 178 RLTAMRRIVLPQAMRVIVPPVGNEFIGLLKTSSMASAIAFTELLHRAQLIYFVNAKVMEL 237 Query: 192 YCELAFVYLILTSFCYIIQIKIESSVTQ-HTYSVDK 226 YLI+ + Q+ IE + H++S + Sbjct: 238 LIVATGWYLIVVTLLSFFQVGIERRFNRGHSFSARR 273 >gi|307299191|ref|ZP_07578992.1| polar amino acid ABC transporter, inner membrane subunit [Thermotogales bacterium mesG1.Ag.4.2] gi|306914987|gb|EFN45373.1| polar amino acid ABC transporter, inner membrane subunit [Thermotogales bacterium mesG1.Ag.4.2] Length = 223 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 107/187 (57%), Gaps = 2/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + ++++ +P+ L + VTL + I+ VI IIG +A+ R++ + + + + I Sbjct: 5 WKIVVNYWPKFL-EGLGVTLEMTLIAVVIGFIIGVILAIARVY-GNKLFHGVATAIIEII 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF+++YGLP +G+ F A II +N Y +E +R SI SI Q A+ Sbjct: 63 RGTPLLVQLFILYYGLPPLGMNLSPFAAAIIGFAINSGCYQAEYLRGSIQSISGNQMKAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+T+ Q I II+PQ ++EFI +LK TS+A + PE+ A+ I S Sbjct: 123 RSLGMTKWQAILQIIMPQAFRRVIPAWTNEFIYLLKYTSLAYIVGAPELMAQAKFIASRN 182 Query: 186 YQPLIIY 192 +Q +Y Sbjct: 183 FQFFEVY 189 >gi|242279379|ref|YP_002991508.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242122273|gb|ACS79969.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 269 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 74/191 (38%), Positives = 117/191 (61%), Gaps = 4/191 (2%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P L + VTL I +SFV++ IIG A++R+ S T + I Y+ I R TPLL+Q Sbjct: 64 PGPLLEGLGVTLEITGLSFVLTFIIGLGTAIMRLSGSFTAKA-IARIYLEIIRNTPLLIQ 122 Query: 74 LFVIFY-GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 LF I++ P IGI + F A +I+L+L AY SEI R+ I SI +GQW+A++++G + Sbjct: 123 LFFIYFVAAPIIGI--NGFWASVIALSLFEGAYASEIFRAGITSIDRGQWEAAFSLGGDK 180 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 K ++ILPQ + A PL+ + I+++K +++ ST+ I ++ Q I+S T+ I+ Sbjct: 181 KFAYINVILPQAVPRIAPPLAGQAIALVKDSALVSTVAIYDLTMQGQSIISETFLTFEIW 240 Query: 193 CELAFVYLILT 203 +A VYL +T Sbjct: 241 FIVAAVYLSIT 251 >gi|229916228|ref|YP_002884874.1| polar amino acid ABC transporter inner membrane subunit [Exiguobacterium sp. AT1b] gi|229467657|gb|ACQ69429.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sp. AT1b] Length = 219 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 126/216 (58%), Gaps = 7/216 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I DS P +L I V + +S +I + +G +A ++I + +I+ I H Y +F Sbjct: 3 FSRIYDSIPYIL-EGIPVMFQVVIVSALIGISLGIVVATLKIV-PNRLINFIGHAYTAVF 60 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I +GLP + G + + + +I+ +LN AYISEIIR+ I ++ KGQW+A Sbjct: 61 RGTPLILQLAIIHFGLPQLTGYITTPYQSAVIAFSLNSGAYISEIIRAGIQAVDKGQWEA 120 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 S A+G+ + +R IILPQ L +E I++ K +++ ST+ + +I + AQ + Sbjct: 121 SDALGVPYVKQLRSIILPQAFKNILPALVNEMITLTKESALVSTVGVLDIMRRAQIVGGQ 180 Query: 185 T---YQPLIIYCELAF-VYLILTSFCYIIQIKIESS 216 ++PL+ + F + +ILT ++ ++ S Sbjct: 181 KAIYFEPLLFAGVIYFTIVMILTYLGQRLEKRLRKS 216 >gi|241666975|ref|YP_002985059.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862432|gb|ACS60097.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 213 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 64/192 (33%), Positives = 116/192 (60%), Gaps = 3/192 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ + FV I G +A+ R ++ + Y+ +F+GTPLL+QLFV++YGL Sbjct: 16 TVLLSAVGFVCGGIAGLGVALARAS-GIPLLERLTAGYIAVFQGTPLLMQLFVVYYGLAL 74 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G++ DS+VA+ I LTL+ SAY+ EI R SI ++P+GQ +A+ A+ L ++ +ILPQ Sbjct: 75 VGLMLDSWVAVAIGLTLHASAYLGEIWRGSIEAVPRGQTEAAKALSLRYISRMKDVILPQ 134 Query: 144 TITTSAVPLSSEF-ISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + S +P + F + ++K TS+AS + E+ + I + +QPL ++ + +Y ++ Sbjct: 135 ALRVS-LPATIGFLVQLIKGTSLASIVGFTELTRAGNIISNQIFQPLTVFGVVGILYFLM 193 Query: 203 TSFCYIIQIKIE 214 I+ ++E Sbjct: 194 CCPLTILGARLE 205 >gi|104784171|ref|YP_610669.1| amino acid ABC transporter permease [Pseudomonas entomophila L48] gi|95113158|emb|CAK17886.1| putative amino acid ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 221 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 57/170 (33%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + A+ VTL + I+ S+++ A I +F + + L+ YV + R TPLL+QLF + Sbjct: 16 FKAVGVTLQVGLIAIATSMLVALVNATILVFCTPYLRRLVQG-YVELARNTPLLIQLFFV 74 Query: 78 FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 ++ LP +G+ F A II++T AY++E++R+ + ++P+ Q ++ +IGL+ Q +R Sbjct: 75 YFALPSLGLKVSGFTAAIITMTFMGGAYLTEVLRAGVEAVPRAQLESGRSIGLSEGQLLR 134 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 H+ILPQ S L + F+ +LK T+V S + +PEI T + ++ Y+ Sbjct: 135 HVILPQAGILSLPALFANFVFLLKETTVVSAVAVPEILYTTKNYIALYYK 184 >gi|222094396|ref|YP_002528455.1| ABC transporter , permease; glutamine ABC transporter , permease [Bacillus cereus Q1] gi|229194960|ref|ZP_04321741.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus m1293] gi|221238453|gb|ACM11163.1| ABC transporter, permease; probable glutamine ABC transporter, permease [Bacillus cereus Q1] gi|228588528|gb|EEK46565.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus m1293] Length = 214 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 103/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + + S I+ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGIVR-YTKIPVFSQILGVIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A+I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK T++A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTALAVVISLPELMHNAQ 176 >gi|329922367|ref|ZP_08278044.1| ABC transporter, permease protein [Paenibacillus sp. HGF5] gi|328942230|gb|EGG38501.1| ABC transporter, permease protein [Paenibacillus sp. HGF5] Length = 480 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 65/184 (35%), Positives = 109/184 (59%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I TL I+ + + I+G IA++R+ I+ + Y+ I RGTP+LVQLF+I Y Sbjct: 278 GIQFTLLISALGVLFGFILGLIIALMRMS-GVKILKFLATAYIEIIRGTPMLVQLFIIHY 336 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 L I F + I++L++N +AY++EI R+ I + +GQ +A+ ++G+T+ + +RHI Sbjct: 337 SLAAFDIKFSPIQSGILTLSINSAAYLAEIFRAGIQGVDRGQLEAARSLGMTKGKAMRHI 396 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + + +EF+ I+K +S+ S I + +I AQ + +T+ PL A +Y Sbjct: 397 ILPQALKGVLPAIGNEFVVIIKESSIVSFIGVFDIMYQAQILRGSTFAPLNPLLVAAMIY 456 Query: 200 LILT 203 ILT Sbjct: 457 FILT 460 >gi|190151021|ref|YP_001969546.1| aino acid ABC transporter permease [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264380|ref|ZP_07545967.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189916152|gb|ACE62404.1| putative ABC transporter, permease protein, amino acid [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870267|gb|EFN02024.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 219 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 62/179 (34%), Positives = 107/179 (59%), Gaps = 2/179 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++++ P+ + AAI+ TL ++ ++SLI G IAV+ + L Y+ + R T Sbjct: 6 VVNAIPRFIDAAII-TLQLSFWGILLSLIFGLLIAVVTAYQVKPFYGL-ARGYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF ++YGLP IGI +D F II+L ++Y++E +R+ ++++PKGQ +A+ AI Sbjct: 64 PLLIQLFFLYYGLPKIGIKWDGFTCGIIALVFLGASYMAEALRAGLLAVPKGQTEAAKAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GL R Q R++I PQ S + + + ++K TSV S + + E+ + I+ Y+ Sbjct: 124 GLNRFQVFRYVIFPQAWAVSIPAIGANVLFLIKETSVISAVAVAELMFVTKDIIGMDYK 182 >gi|167748155|ref|ZP_02420282.1| hypothetical protein ANACAC_02899 [Anaerostipes caccae DSM 14662] gi|167652147|gb|EDR96276.1| hypothetical protein ANACAC_02899 [Anaerostipes caccae DSM 14662] Length = 219 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/168 (35%), Positives = 106/168 (63%), Gaps = 1/168 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+ +TL I + V+S++IGF +++R ++ +++ I+ Y+ + R TPLL+QLF ++Y Sbjct: 16 AMKLTLGIGALGVVLSVVIGFLCSMVR-YYRVPVLNRIVGIYIELSRNTPLLIQLFFLYY 74 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP IGI ++FV +I LT ++Y+SE R + ++ K Q ++ +IGLT+ Q +R+I Sbjct: 75 GLPKIGIKLNAFVIAVIGLTFLGASYMSEAFRGGLEAVNKIQEESGLSIGLTKPQLMRYI 134 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 ILPQ + + + + I +LK TSV S I + ++ A+ ++ Y+ Sbjct: 135 ILPQALAIAMPSVGANVIFLLKETSVFSAIALADLMFVAKDLIGMYYK 182 >gi|254512946|ref|ZP_05125012.1| ABC-type glutamine transport system, permease component [Rhodobacteraceae bacterium KLH11] gi|221532945|gb|EEE35940.1| ABC-type glutamine transport system, permease component [Rhodobacteraceae bacterium KLH11] Length = 252 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 75/194 (38%), Positives = 113/194 (58%), Gaps = 7/194 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L + + T+ I+ I+ V+S+ IG +A+ + + L+ YV R PLL L Sbjct: 39 KFLISGMGATIQISLIAAVLSIAIGLLVALPGLSEKRSW-RLVNRVYVEFIRAIPLLPML 97 Query: 75 FVIFYGLP------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 F +FYGLP + I D F II+L ++ SA+ +EI R+ I SI +GQ +A+ I Sbjct: 98 FWVFYGLPIVFQSMGLNIPIDPFWGAIITLAISDSAFTAEIYRAGIQSIARGQREAAQTI 157 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL QT+R++ILPQ I PL+++FI I+K ++ AS I + E+ + A +V T Y+P Sbjct: 158 GLNYIQTMRYVILPQAIRRILPPLANQFIYIVKMSAFASVIGMQELTRRANELVVTEYRP 217 Query: 189 LIIYCELAFVYLIL 202 L IY L F YLIL Sbjct: 218 LEIYTLLIFEYLIL 231 >gi|223933890|ref|ZP_03625854.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] gi|253751333|ref|YP_003024474.1| amino acid ABC transporter permease [Streptococcus suis SC84] gi|253753234|ref|YP_003026374.1| amino acid ABC transporter permease [Streptococcus suis P1/7] gi|253755057|ref|YP_003028197.1| amino acid ABC transporter permease [Streptococcus suis BM407] gi|330832340|ref|YP_004401165.1| polar amino acid ABC transporter inner membrane subunit [Streptococcus suis ST3] gi|223897448|gb|EEF63845.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] gi|251815622|emb|CAZ51208.1| putative amino acid ABC transporter permease protein [Streptococcus suis SC84] gi|251817521|emb|CAZ55265.1| putative amino acid ABC transporter permease protein [Streptococcus suis BM407] gi|251819479|emb|CAR45008.1| putative amino acid ABC transporter permease protein [Streptococcus suis P1/7] gi|292557906|gb|ADE30907.1| permease protein [Streptococcus suis GZ1] gi|319757618|gb|ADV69560.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis JS14] gi|329306563|gb|AEB80979.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis ST3] Length = 229 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 122/212 (57%), Gaps = 13/212 (6%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 Y AIV TL IA S I+G +A + +++ + YVWIFRGTP++VQ+ + Sbjct: 15 YGAIV-TLIIAFFSVFFGSILGVLLAFAQ-RSKYKVLAWTANIYVWIFRGTPMIVQIMIA 72 Query: 78 FYGLPH-------IGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 F + H +GI+ + II +++N AY+SE +R+ I ++PKGQ +A+Y+ Sbjct: 73 F-AMTHFVAPTFQLGILTVDLTRLIPGIIVISMNSGAYVSETVRAGINAVPKGQLEAAYS 131 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ KQ +R++I+PQ I L +EF++I+K +S+ STI + E++ AQ + ST+Y Sbjct: 132 LGIRPKQAMRYVIMPQAIKNILPALGNEFVTIVKDSSLLSTIGVMELWNGAQTVQSTSYI 191 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 PL A YLI+T+ +I E + + Sbjct: 192 PLTPLVFAASYYLIMTTVLTVIIQSFEKKLNK 223 >gi|239818200|ref|YP_002947110.1| polar amino acid ABC transporter inner membrane protein [Variovorax paradoxus S110] gi|239804777|gb|ACS21844.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 226 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 61/229 (26%), Positives = 122/229 (53%), Gaps = 13/229 (5%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M YEW + + +L A + T+ IA ++ + ++ G +A +R+ + + + Sbjct: 1 MNYEWDFSGVWAHRDMLLAGFLGTMKIAAVAIALGVVFGVVLAALRL----SGRAWLARP 56 Query: 61 YVWI---FRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +W+ +R TP LV F FY LP IG+ D + A +I+L+ A+ +E+ R ++S Sbjct: 57 ALWVIEFYRNTPPLVHFFWAFYALPVLIGVSLDPYAAAVIALSTQSGAFFAEVFRGGLVS 116 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQW+A+ A+G+ Q +R ++LPQ + P ++K+T++AST+ ++ Sbjct: 117 IERGQWEAARAVGMRSHQALRRVVLPQALARMLPPFIERSFELIKTTALASTLAYSDLLY 176 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 A ++ S T++PL +Y +A ++ F + + + + V +H ++ Sbjct: 177 QAMQLNSITFRPLEVYTVVAAIF-----FLALFSLSLVARVAEHRLAIS 220 >gi|83748398|ref|ZP_00945421.1| Amino acid ABC transporter permease protein [Ralstonia solanacearum UW551] gi|207738968|ref|YP_002257361.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] gi|83724914|gb|EAP72069.1| Amino acid ABC transporter permease protein [Ralstonia solanacearum UW551] gi|206592339|emb|CAQ59245.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] Length = 262 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 57/167 (34%), Positives = 96/167 (57%), Gaps = 6/167 (3%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 FY+W+ RGTPLLVQ+ +F LP + D F + ++L N AY +E IR+ ++++ Sbjct: 96 FYIWVIRGTPLLVQILFVFLALPAWLPWLQMDDFTSACVALAFNAGAYNAESIRAGLLAV 155 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKGQ +A++++GL+R T +I PQ + PL + FI++LK +S+A I + E+ Sbjct: 156 PKGQLEAAHSLGLSRWHTFADVIFPQAFKVALPPLVNNFIALLKDSSLAYAIGVVELTNV 215 Query: 178 AQRIVSTTYQPLIIYCELAFVYL----ILTSFCYIIQIKIESSVTQH 220 R+ + T+QPL A +YL +LT F ++ +++ Q Sbjct: 216 GNRLQAATFQPLPALVTTAVIYLTLTTVLTQFSNAVEQRMDVEGRQR 262 >gi|317407116|gb|EFV87120.1| ABC transporter [Achromobacter xylosoxidans C54] Length = 217 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 62/184 (33%), Positives = 113/184 (61%), Gaps = 5/184 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + I+ +++ +G +A++RI +S +++ Y+W+ RGTPL++Q+ I++ LP Sbjct: 17 VTLTLFFITLALAVPLGLVLALLRIS-KWGFVSQLVNGYIWLMRGTPLMLQMLFIYFALP 75 Query: 83 HI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + G+ F A +++ LN++AY +EI R+ I S+ +GQ++ S +G+T QT+R I Sbjct: 76 FVPVVGVRLPDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEGSKVLGMTYLQTLRRI 135 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + P+S+E I+++K TS+ + + +I +TA+ IV + AF Y Sbjct: 136 VLPQMVQRVLPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAAAF-Y 194 Query: 200 LILT 203 LI+T Sbjct: 195 LIMT 198 >gi|229916002|ref|YP_002884648.1| polar amino acid ABC transporter inner membrane subunit [Exiguobacterium sp. AT1b] gi|229467431|gb|ACQ69203.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sp. AT1b] Length = 232 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 101/161 (62%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FY+ RG P+L+ LF+++ G P IGI F + A I+ +LN +AYI+EIIRSSI ++ Sbjct: 66 FYISFMRGVPILIILFILYSGFPFIGIEFAALTAAILGFSLNSAAYIAEIIRSSIRAVDD 125 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ ++G+ + T++ ++LPQ + PLS+ F+ ++K++S+A+ IT+PEIF A+ Sbjct: 126 GQVEAARSLGMGKWLTLKGVVLPQATRIALPPLSNVFLDLIKASSLAAMITVPEIFNKAK 185 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + + + +Y +A +Y + +F Q +E ++ Sbjct: 186 IVGGREFDYMTVYIVVALIYWAICTFMSFFQEWLERHFERY 226 >gi|295702500|ref|YP_003595575.1| glutamine ABC transporter permease GlnP [Bacillus megaterium DSM 319] gi|294800159|gb|ADF37225.1| glutamine ABC transporter, permease protein GlnP [Bacillus megaterium DSM 319] Length = 216 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 74/193 (38%), Positives = 116/193 (60%), Gaps = 2/193 (1%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL +A IS V+S +IG + ++R + ++S ++ F V I R PLL+ +F ++ LP Sbjct: 21 VTLKVAFISIVLSFLIGSIVGILR-YARIPVLSHVLAFIVEIIRNLPLLLIIFFTYFALP 79 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 IGI + A I++LT+ SA ISEIIRS + SI KGQ +A+ + GL QT+R ++LP Sbjct: 80 EIGIDMEITSAAIVALTVFESAMISEIIRSGLKSIEKGQIEAARSSGLNYYQTLRFVVLP 139 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI-IYCELAFVYLI 201 Q + PL S+FIS+LK TS+A I +P++ AQ I ++ ++ +A +Y I Sbjct: 140 QALRRMVPPLVSQFISLLKDTSLAVVIALPDLLHNAQIIYGQKQSYVVPMFLIIAMMYFI 199 Query: 202 LTSFCYIIQIKIE 214 + II ++E Sbjct: 200 VNYALSIIARRLE 212 >gi|149187232|ref|ZP_01865530.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1] gi|148838768|gb|EDL55707.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1] Length = 264 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 125/209 (59%), Gaps = 6/209 (2%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL-IMHFYVWIFRGTPLL 71 +P L +VVTL I+ ++ V +L+ G A+++ S++++ I H YV R TPLL Sbjct: 56 WPAELLEGLVVTLKISGLALVFTLLFGLITALLKT--SNSVVGRGIAHCYVEGIRNTPLL 113 Query: 72 VQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 VQ++++++ P IG+ D F + +L L AY +EI+R+ + SIPKGQ++A ++GL Sbjct: 114 VQIYLLYFVFGPIIGL--DRFSTAVFALALFQGAYTAEILRAGLNSIPKGQFEACRSVGL 171 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 +R T +ILPQ + + PL++E +S++K++S+ S + I ++ + IVS T P Sbjct: 172 SRFYTYYDVILPQVVRRTVPPLTNEIVSLIKNSSIVSVMAIFDLTTEGRNIVSETAMPFE 231 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQ 219 I+ +A +YL+LT + +E + Q Sbjct: 232 IWFTVAAIYLVLTLTLSALSAWLEHRLNQ 260 >gi|288555859|ref|YP_003427794.1| ABC transporter permease [Bacillus pseudofirmus OF4] gi|288547019|gb|ADC50902.1| ABC transporter (permease) [Bacillus pseudofirmus OF4] Length = 218 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 113/200 (56%), Gaps = 1/200 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I VTL S ++ LI+G +A+++I ++ H Y +FRGTPL++QL +I+Y Sbjct: 18 GIGVTLQFVSTSLLVGLILGIILAIMKIG-KIAVLRWFAHAYTSVFRGTPLILQLSIIYY 76 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G P GI +F+A +++ LN SAY+SEIIR+ I ++ KGQ +A+ A+G+ + + I Sbjct: 77 GAPQFGIEMSAFLAGVLAFGLNSSAYVSEIIRAGIQAVDKGQKEAAAALGIPERPMMIRI 136 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ L +EFI++ K +++ S I + +I + AQ + + Y+ + +Y Sbjct: 137 ILPQAFRNILPALFNEFINLTKESAIVSIIGVWDIMRRAQMVNAQIYKYFEALLFVGLIY 196 Query: 200 LILTSFCYIIQIKIESSVTQ 219 ++ II IE + + Sbjct: 197 YVMVMVLTIIGRMIERRLQR 216 >gi|226315384|ref|YP_002775280.1| glutamine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226098334|dbj|BAH46776.1| glutamine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 217 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 117/203 (57%), Gaps = 4/203 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M W ++I+D+ P L + VVTL I IS +L+IG ++ S ++ I Sbjct: 1 MSSSW-DVIVDALPVLAQGS-VVTLKITVISLFFALLIGLLFGLMSTSRSK-LLRGIATA 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV RGTPLLVQ+F I++GLP + I A I++L+LN AY++EI R I+SI K Sbjct: 58 YVDFLRGTPLLVQIFFIYFGLPPVLDIKIPETTAGILALSLNAGAYLAEIFRGGILSIDK 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ ++GL+ + +R +ILPQ + ++FI LK TS+ + I I E+ + + Sbjct: 118 GQMEAARSLGLSHGKAMRLVILPQAVRRMIPAFVNQFIVTLKDTSLLTVIGIRELMNSGE 177 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 I+S+ ++ I+ +A Y ++ Sbjct: 178 IIISSNFRSFEIWAVVAVFYFLM 200 >gi|226365139|ref|YP_002782922.1| glutamine ABC transporter glutamine-binding/permease protein [Rhodococcus opacus B4] gi|226243629|dbj|BAH53977.1| putative glutamine ABC transporter glutamine-binding/permease protein [Rhodococcus opacus B4] Length = 489 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 127/215 (59%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 LI ++P LL + +T+ + +S I+L++G + R+ ++ ++ I YV +F Sbjct: 277 LGLIKSTYP-LLLEGLWLTIVLTVVSIAIALVLGAIFGLFRVS-TNIVLRGIGTTYVDVF 334 Query: 66 RGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQ F I++G+P + +F A II+L+LN AY++EI+R I+S+ KGQ +A Sbjct: 335 RGTPLLVQAFFIYFGIPAALDFQMSAFTAGIITLSLNAGAYMAEIVRGGILSVDKGQMEA 394 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 S ++G++ ++++ +++PQ + T ++F+ LK TS+ S I + E+ QT + I++ Sbjct: 395 SRSLGISYLKSMQKVVMPQAVRTMIPSYINQFVITLKDTSILSVIGLAELTQTGRIIIAR 454 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 +Q ++ + +Y I+ + ++E + Q Sbjct: 455 NFQSFNMWLIIGVMYFIIIMALTKLSNRLEKRINQ 489 >gi|53728921|ref|ZP_00348273.1| COG0765: ABC-type amino acid transport system, permease component [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209155|ref|YP_001054380.1| putative ABC transporter, permease protein, amino acid [Actinobacillus pleuropneumoniae L20] gi|126097947|gb|ABN74775.1| putative ABC transporter, permease protein, amino acid [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 219 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 63/179 (35%), Positives = 108/179 (60%), Gaps = 2/179 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I++ P+ + AAI+ TL ++ ++SLI G IAVI + + + Y+ + R T Sbjct: 6 VINAIPRFIDAAII-TLQLSFWGILLSLIFGLLIAVITAY-QVKPFNRLARGYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF ++YGLP IGI +D F II+L ++Y++E +R+ ++++PKGQ +A+ AI Sbjct: 64 PLLIQLFFLYYGLPKIGIKWDGFTCGIIALVFLGASYMAEALRAGLLAVPKGQTEAAKAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GL R Q R++I PQ S + + + ++K TSV S + + E+ + I+ Y+ Sbjct: 124 GLNRFQVFRYVIFPQAWAVSIPAIGANVLFLIKETSVISAVAVAELMFVTKDIIGMDYK 182 >gi|51473329|ref|YP_067086.1| glutamine transport system permease protein GlnP [Rickettsia typhi str. Wilmington] gi|81692320|sp|Q68XN8|GLNP_RICTY RecName: Full=Putative glutamine transport system permease protein glnP gi|51459641|gb|AAU03604.1| glutamine transport system permease protein GlnP [Rickettsia typhi str. Wilmington] Length = 218 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 124/203 (61%), Gaps = 7/203 (3%) Query: 9 IIDSFPQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +I +P++L+ +VTL + I+ ++ L+IG +A+ ++ + ++ L +FY IFR Sbjct: 5 LIKFYPKILFIIEGTLVTLKYSIIAVILGLVIGMLLAICKVN-KNCVLRLFANFYTSIFR 63 Query: 67 GTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 GTPLLVQL +I++ P+I I F F+A +IS LN AY+SE+IR+ I +I KGQ++A+ Sbjct: 64 GTPLLVQLSIIYFAAPYIISIKFSVFMAGVISFALNSGAYVSEVIRAGINTIDKGQFEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+ + + ++ IILPQ I L +E I+++K +++ S + ++ + AQ + T Sbjct: 124 EALAIPKFLIMKDIILPQAINNIFPSLVNELINLIKESAIISMLGEMDLMRRAQIVSIET 183 Query: 186 YQ---PLIIYCELAFVYLILTSF 205 Y P++I ++ ++L SF Sbjct: 184 YNYFFPMLIAACCYYILVMLISF 206 >gi|225027102|ref|ZP_03716294.1| hypothetical protein EUBHAL_01358 [Eubacterium hallii DSM 3353] gi|224955566|gb|EEG36775.1| hypothetical protein EUBHAL_01358 [Eubacterium hallii DSM 3353] Length = 222 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 124/220 (56%), Gaps = 9/220 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++ + +P LL + +T+ I +S +I+L+IG F+ ++ I S+ ++ I FY+W+ Sbjct: 4 FGVLSEVYPTLL-TGLTMTVKITILSLIIALVIGIFVCLMNIS-SNIVLRGIAKFYIWLI 61 Query: 66 RGTPLLVQLFVIFYGLPHI-----GIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIP 118 RGTP+LVQ F ++ LP + G F F A +++L LN AYISEI R SI S+ Sbjct: 62 RGTPMLVQAFYFYFALPQLVQAVTGSQFRITVFTASLVTLALNAGAYISEIFRGSIESVN 121 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A+ ++GL+ ++++ IILPQ + L ++FI LK +++ I + E+ A Sbjct: 122 KGQMEAARSLGLSYAKSMQKIILPQAVRICLPSLVNQFIITLKDSTILYAIGLSEVMYNA 181 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 + V T + Y +A +L++ + I +E + Sbjct: 182 KIYVGRTMESFATYTWVAVFFLLIVTVLSFISRYVERRMN 221 >gi|317486177|ref|ZP_07945016.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] gi|316922568|gb|EFV43815.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] Length = 224 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 119/211 (56%), Gaps = 5/211 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++ + + L +I + +P A I FV+ ++ G V R+F + SL F IF Sbjct: 10 FQTVLPALNRGLVMSIALIVPSATIGFVLGVLTG----VARVFGPKWLRSLGNGFTT-IF 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG PL+VQL ++++GLP++GI + + A ++ L AY SE +R +++SI +GQ A+ Sbjct: 65 RGVPLVVQLMILYFGLPNLGIYLEPYPASVLGFILCTGAYQSEYVRGALLSIRQGQIKAA 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 YA+G T+ QTI +++PQ + +E I ++K +S+A IT E+ A+ +VS + Sbjct: 125 YALGFTKLQTILWVVIPQAARRALPGCGNEIIYLIKYSSLAYIITCIELTGEAKVLVSRS 184 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 ++P +Y YL+L SF K+E Sbjct: 185 FRPTEVYIVAGIYYLVLVSFATWFLQKLERK 215 >gi|323529256|ref|YP_004231408.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323386258|gb|ADX58348.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 216 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 62/170 (36%), Positives = 98/170 (57%), Gaps = 1/170 (0%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV 92 V +IG AV+R F + Y +FRGTP+L+ L I++G+ + G D F Sbjct: 29 VGGTLIGLLAAVLRSF-GPWGTPTVARLYTELFRGTPVLITLMFIYFGVSYFGYAIDVFA 87 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 A ++ L++ AYI+E+ RS I ++PKGQW+ S +GL++ QT +ILPQT PL Sbjct: 88 AGVVGLSVYQGAYIAEVFRSGIEAVPKGQWEVSQILGLSKTQTFFSVILPQTGKIVMPPL 147 Query: 153 SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 +++S++K TS+ S I + E+ Q IV +P+ IY +A +Y I+ Sbjct: 148 IGQYLSLIKDTSIVSMIGMSELMHGGQAIVDRVGKPVEIYGLVAVLYFIV 197 >gi|15896853|ref|NP_350202.1| amino acid ABC transporter permease [Clostridium acetobutylicum ATCC 824] gi|15026719|gb|AAK81542.1|AE007858_3 Amino acid ABC transporter, permease component [Clostridium acetobutylicum ATCC 824] gi|325511027|gb|ADZ22663.1| Amino acid ABC transporter, permease component [Clostridium acetobutylicum EA 2018] Length = 217 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 74/168 (44%), Positives = 107/168 (63%), Gaps = 2/168 (1%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG--IVFDSFVAIIISLTLNFSAYISEII 110 +++LI FY WI RGTPLL+QL+V +YGLP + + A I+ L+LN AYI+EII Sbjct: 48 VLNLIGKFYTWILRGTPLLLQLYVYYYGLPFLSDKLTMTPMKAAILGLSLNSGAYIAEII 107 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R I++I GQ++AS A+GLT QT++ IILPQ I P +EFI+++K TS+ S IT Sbjct: 108 RGGILAIDNGQFEASKALGLTYGQTMKRIILPQAIRVVIPPCGNEFIAMIKDTSLVSVIT 167 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 + E+ + AQ +VS++ + Y YLILT+ I KIE ++ Sbjct: 168 MEELLRKAQLLVSSSGDAVTPYLFAGIFYLILTTIFTGIFSKIEKKLS 215 >gi|307250982|ref|ZP_07532908.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857010|gb|EFM89140.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 219 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 62/179 (34%), Positives = 107/179 (59%), Gaps = 2/179 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++++ P+ + AAI+ TL ++ ++SLI G IAV+ + L Y+ + R T Sbjct: 6 VVNAIPRFIDAAII-TLQLSFWGILLSLIFGLLIAVVTAYQVKPFYGL-ARGYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF ++YGLP IGI +D F II+L ++Y++E +R+ ++++PKGQ +A+ AI Sbjct: 64 PLLIQLFFLYYGLPKIGIKWDGFTCGIIALVFLGASYMAEALRAGLLAVPKGQTEAAKAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GL R Q R++I PQ S + + + ++K TSV S + + E+ + I+ Y+ Sbjct: 124 GLNRFQVFRYVIFPQAWAVSIPAIGANVLFLIKETSVISAVAVAELMFVTKDIIGMDYK 182 >gi|149376082|ref|ZP_01893848.1| ABC-type arginine/histidine transport system, permease component [Marinobacter algicola DG893] gi|149359719|gb|EDM48177.1| ABC-type arginine/histidine transport system, permease component [Marinobacter algicola DG893] Length = 240 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 67/217 (30%), Positives = 123/217 (56%), Gaps = 10/217 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + +V T+ + +S ++ L++ +A++R + +I+ + FY +IFRGTPLL+QL++I Sbjct: 24 WGGLVTTVQLVFLSLILGLLVAVPLAIMRTS-KNPLINGPVWFYTYIFRGTPLLIQLYII 82 Query: 78 FYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +YGL I I ++F +++ TLN +AY +EIIR +I++ P G+ +A+ A Sbjct: 83 YYGLAQIEGIQQTFWWDIFREAFYPALLAFTLNTAAYTTEIIRGAIVATPSGEIEAAKAY 142 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G++ +R IILP S+E I +L ++++AS +T+ ++ A+ I S Y P Sbjct: 143 GMSWALRMRRIILPSAARRGVQAYSNEVIFMLHASAIASVVTLVDLTGAARNIYSRFYAP 202 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + +A +Y+ LT K+E+ + QH V+ Sbjct: 203 FDAFIFVALLYMALTFMLVFAFRKLENYLLQHQRPVN 239 >gi|57234795|ref|YP_181163.1| His/Glu/Gln/Arg/opine ABC transporter permease [Dehalococcoides ethenogenes 195] gi|57225243|gb|AAW40300.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Dehalococcoides ethenogenes 195] Length = 273 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 64/192 (33%), Positives = 113/192 (58%), Gaps = 15/192 (7%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + ++ I +T+ +A +S+ + LI+G F A+ R+ +TI+ + FYV I RG PLLVQL Sbjct: 54 KYVWVGIGITVLVAVVSYFLMLILGMFGALGRLS-KNTILRGLATFYVEIVRGIPLLVQL 112 Query: 75 FVIFYGLPHI------GIVF--------DSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 ++ P I G+ F + V I +T + AY+SEI R+ I SIPKG Sbjct: 113 IWWYFAFPVIIQSIGQGLNFGPMMNYQANPIVMAIWGMTFCYGAYMSEIYRAGIQSIPKG 172 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++G++ Q +R++ILPQ + P+ +EFI++LK TS+ ST+ + ++ + + Sbjct: 173 QMEAARSLGMSHTQAMRYVILPQALRVVLPPMGNEFIALLKDTSLVSTVAVADMVRLGRE 232 Query: 181 IVSTTYQPLIIY 192 +T + P+ ++ Sbjct: 233 FTATNFNPIEVW 244 >gi|146318204|ref|YP_001197916.1| amino acid (glutamine) ABC transporter permease [Streptococcus suis 05ZYH33] gi|146320398|ref|YP_001200109.1| amino acid (glutamine) ABC transporter permease [Streptococcus suis 98HAH33] gi|253751386|ref|YP_003024527.1| amino acid ABC transporter permease [Streptococcus suis SC84] gi|253753287|ref|YP_003026427.1| amino acid ABC transporter permease [Streptococcus suis P1/7] gi|253755882|ref|YP_003029022.1| amino acid ABC transporter permease [Streptococcus suis BM407] gi|145689010|gb|ABP89516.1| amino acid (glutamine) ABC transporter, permease protein [Streptococcus suis 05ZYH33] gi|145691204|gb|ABP91709.1| amino acid (glutamine) ABC transporter, permease protein [Streptococcus suis 98HAH33] gi|251815675|emb|CAZ51263.1| putative amino acid ABC transporter permease protein [Streptococcus suis SC84] gi|251818346|emb|CAZ56170.1| putative amino acid ABC transporter permease protein [Streptococcus suis BM407] gi|251819532|emb|CAR45120.1| putative amino acid ABC transporter permease protein [Streptococcus suis P1/7] gi|292558005|gb|ADE31006.1| amino acid (glutamine) ABC transporter, permease protein [Streptococcus suis GZ1] gi|319757672|gb|ADV69614.1| amino acid (glutamine) ABC transporter, permease protein [Streptococcus suis JS14] Length = 213 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 121/211 (57%), Gaps = 5/211 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIG-FFIAVIRIFFSDTIISLIMHFYVWIF 65 + +++ P LL A V+L + + ++SL +G F +++I F + ++HFYV I Sbjct: 2 DYVLEVLPSLLNGA-AVSLQVFFLVLILSLPLGAVFAFLMQIKFKP--LQWLLHFYVLIM 58 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLL+QL ++Y LP +GI FD A+I++ TLN++AY SEI R I +IPKGQ++A+ Sbjct: 59 RGTPLLLQLIFVYYVLPSVGITFDRMPAVILAFTLNYAAYFSEIFRGGIEAIPKGQYEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 + T QTIR+I+LPQ + + +E ++++K TS+ + + ++ A R + Sbjct: 119 KVLKFTPVQTIRYIVLPQVVKIVLPSVFNEVMTLVKDTSLVYALGVSDLL-LASRTAANR 177 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 L +YL++ +I ++E Sbjct: 178 DASLAPMFIAGAIYLLMIGAVTLISKQVEKK 208 >gi|16079988|ref|NP_390814.1| sulfur-containing amino acid ABC transporter permease [Bacillus subtilis subsp. subtilis str. 168] gi|221310880|ref|ZP_03592727.1| hypothetical protein Bsubs1_16026 [Bacillus subtilis subsp. subtilis str. 168] gi|221315205|ref|ZP_03597010.1| hypothetical protein BsubsN3_15922 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320123|ref|ZP_03601417.1| hypothetical protein BsubsJ_15838 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324405|ref|ZP_03605699.1| hypothetical protein BsubsS_15997 [Bacillus subtilis subsp. subtilis str. SMY] gi|7674447|sp|O34315|TCYL_BACSU RecName: Full=L-cystine transport system permease protein tcyL gi|2293249|gb|AAC00327.1| amino acid transporter [Bacillus subtilis] gi|2635401|emb|CAB14896.1| sulfur-containing amino acid ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] Length = 239 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 120/200 (60%), Gaps = 9/200 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+I D P L A + VTL I +S + ++G F+A+ RI+ + I++ + Y+ FR Sbjct: 8 NMIGDFVPTLT-AYLPVTLYILTLSLLFGFVLGLFLALPRIY-NIPIVNQLAKVYISFFR 65 Query: 67 GTPLLVQLFVIFYGLPH----IGI---VFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 GTP++VQLF++FYG+P IGI D F A + + L+ +A +EIIR+ + S+ K Sbjct: 66 GTPIMVQLFIVFYGIPALTGLIGIDTSKMDPFYAAVATYALSNAAAAAEIIRAGVGSVDK 125 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+Y+IGL+ Q R I+LPQ + + + + IS LK TS+A +I + ++ Q Sbjct: 126 GQTEAAYSIGLSGSQAFRRIVLPQALVQAFPNMGNMVISSLKDTSLAFSIGVMDMSGRGQ 185 Query: 180 RIVSTTYQPLIIYCELAFVY 199 +++++ L +Y L+ VY Sbjct: 186 TLITSSNHSLEVYIALSIVY 205 >gi|270292808|ref|ZP_06199019.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. M143] gi|270278787|gb|EFA24633.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. M143] Length = 482 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 126/220 (57%), Gaps = 10/220 (4%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+ +++ QLL + + +TL +A ISF I+++IG + + ++ LI +V + Sbjct: 265 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSL-RLISEIFVDV 321 Query: 65 FRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 RG PL++ IF+G+P+ + FVA I+L+LN +AYI+EI+R I ++ Sbjct: 322 IRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQAV 381 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+FQT Sbjct: 382 PVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQT 441 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + I++ YQ +Y LA YL++ + + ++E + Sbjct: 442 GKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 481 >gi|218779109|ref|YP_002430427.1| polar amino acid ABC transporter, inner membrane subunit [Desulfatibacillum alkenivorans AK-01] gi|218760493|gb|ACL02959.1| polar amino acid ABC transporter, inner membrane subunit [Desulfatibacillum alkenivorans AK-01] Length = 267 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 117/205 (57%), Gaps = 2/205 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L I VT + S ++++IIGFF + R+ I++++ YV I RG PLLVQLF Sbjct: 63 LKDGIYVTFQVTFSSILLAIIIGFFTGLGRLS-KIWIVNILASTYVEIVRGIPLLVQLFY 121 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++Y L V D AII ++++ + AY+ E+ R+ I SI KGQ +A+ ++G QT+ Sbjct: 122 LYYALGKFIQVPDKLAAII-AMSICYGAYMGEVFRAGIDSIDKGQTEAARSLGFNGAQTM 180 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 ++ILPQ T P+ +EFI++LK TS+ S + + ++ + + ST++ Y +A Sbjct: 181 MYVILPQAWRTILPPVGNEFIALLKDTSLVSILGVADLLRRGREYASTSFDYFETYTMVA 240 Query: 197 FVYLILTSFCYIIQIKIESSVTQHT 221 VYLI+T + +E + QH Sbjct: 241 VVYLIITLILSKLVSIMEERLGQHD 265 >gi|116494751|ref|YP_806485.1| ABC-type amino acid transport system, permease component [Lactobacillus casei ATCC 334] gi|191638263|ref|YP_001987429.1| Glutamine ABC transporter, permease protein [Lactobacillus casei BL23] gi|227535252|ref|ZP_03965301.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|301066312|ref|YP_003788335.1| amino acid ABC transporter permease [Lactobacillus casei str. Zhang] gi|116104901|gb|ABJ70043.1| amino acid ABC transporter membrane protein, PAAT family [Lactobacillus casei ATCC 334] gi|190712565|emb|CAQ66571.1| Glutamine ABC transporter, permease protein [Lactobacillus casei BL23] gi|227187136|gb|EEI67203.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|300438719|gb|ADK18485.1| ABC-type amino acid transport system, permease component [Lactobacillus casei str. Zhang] gi|327382296|gb|AEA53772.1| ABC transporter, permease protein [Lactobacillus casei LC2W] gi|327385491|gb|AEA56965.1| ABC transporter, permease protein [Lactobacillus casei BD-II] Length = 218 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 60/171 (35%), Positives = 105/171 (61%), Gaps = 5/171 (2%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL----IMHFYVWIFRGT 68 P LL + + +TL I I+ + S+ +G ++V I +I+ ++ YVW+FRGT Sbjct: 8 LPALL-SGVKMTLGIFAITLIGSIPLGLILSVGLIPKPKSILGKAGKGLLEGYVWVFRGT 66 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QL IFYGLP IG+VFD F A +++ LN++AY +EI R +I +GQ++AS + Sbjct: 67 PLLLQLMFIFYGLPIIGLVFDRFSAALVAFILNYAAYFAEIFRGGFGAIDEGQFEASTVL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +TR Q +R++++PQ + + +E I+++K +S+ I + ++ + Sbjct: 127 NMTRWQALRYVVIPQVVKIVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGN 177 >gi|321312472|ref|YP_004204759.1| sulfur-containing amino acid ABC transporter permease [Bacillus subtilis BSn5] gi|320018746|gb|ADV93732.1| sulfur-containing amino acid ABC transporter (permease) [Bacillus subtilis BSn5] Length = 239 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 120/200 (60%), Gaps = 9/200 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+I D P L A + VTL I +S + ++G F+A+ RI+ + I++ + Y+ FR Sbjct: 8 NMIGDFVPTLT-AYLPVTLYILTLSLLFGFVLGLFLALPRIY-NIPIVNQLAKVYISFFR 65 Query: 67 GTPLLVQLFVIFYGLPH----IGI---VFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 GTP++VQLF++FYG+P IGI D F A + + L+ +A +EIIR+ + S+ K Sbjct: 66 GTPIMVQLFIVFYGIPALTGLIGIDTSKMDPFYAAVATYALSNAAAAAEIIRAGVGSVDK 125 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+Y+IGL+ Q R I+LPQ + + + + IS LK TS+A +I + ++ Q Sbjct: 126 GQTEAAYSIGLSGSQAFRRIVLPQALVQAFPNMGNMVISSLKDTSLAFSIGVMDMSGRGQ 185 Query: 180 RIVSTTYQPLIIYCELAFVY 199 +++++ L +Y L+ VY Sbjct: 186 TLITSSNHSLEVYIALSIVY 205 >gi|199597488|ref|ZP_03210917.1| ABC-type amino acid transport system, permease component [Lactobacillus rhamnosus HN001] gi|229552063|ref|ZP_04440788.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|258508265|ref|YP_003171016.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG] gi|258539477|ref|YP_003173976.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc 705] gi|199591511|gb|EDY99588.1| ABC-type amino acid transport system, permease component [Lactobacillus rhamnosus HN001] gi|229314580|gb|EEN80553.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|257148192|emb|CAR87165.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus GG] gi|257151153|emb|CAR90125.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus Lc 705] gi|259649583|dbj|BAI41745.1| amino acid ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 218 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 123/207 (59%), Gaps = 6/207 (2%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL----IMHFYVWIFRGTP 69 P LL + + +TL I I+ V ++ +G ++V I +++ ++ YVW+FRGTP Sbjct: 9 PALL-SGVKMTLGIFAITLVGAIPLGLILSVGLIPKPKSLLGKAGKSLLEGYVWVFRGTP 67 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+QL IFYGLP IGIVFD F A +++ LN++AY +EI R +I +GQ++AS + Sbjct: 68 LLLQLMFIFYGLPIIGIVFDRFSAALVAFILNYAAYFAEIFRGGFGAIDEGQFEASTVLN 127 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 +TR Q +R +++PQ + + +E I+++K +S+ I + ++ + A I S L Sbjct: 128 MTRWQALRFVVIPQVVKIVLPSIGNEVINLVKDSSLVYVIGLGDLLR-AGNIASARDVTL 186 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESS 216 + + +YL+LT +Q +IE++ Sbjct: 187 LPLVLVGVIYLLLTLILTFLQKRIEAA 213 >gi|326388277|ref|ZP_08209880.1| polar amino acid ABC transporter, inner membrane subunit [Novosphingobium nitrogenifigens DSM 19370] gi|326207443|gb|EGD58257.1| polar amino acid ABC transporter, inner membrane subunit [Novosphingobium nitrogenifigens DSM 19370] Length = 242 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 67/199 (33%), Positives = 116/199 (58%), Gaps = 16/199 (8%) Query: 20 AIVVTLPIACISFVIS-----LIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 AIV +P+ FV S L+ G +A + + + I ++++FRGTPLL+Q+ Sbjct: 19 AIVRAVPVTLGLFVASAIGASLLGGGLVAALTAGLAP--VRGIARGWIFLFRGTPLLLQI 76 Query: 75 FVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 F+++YGL +G V D +++T SAYI+E++R ++ +IP GQ +A+ Sbjct: 77 FMVYYGLAALGPVRQGPFWPAFRDPLFCAGLAMTCCCSAYIAEVLRGALAAIPAGQIEAA 136 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A G+ R +R I+LPQ + + +E + ++KSTS+ASTIT+ ++ AQ++++ + Sbjct: 137 LACGMGRVTRLRLIVLPQMLRLALPAYGNELVMMVKSTSLASTITVLDVTGVAQQVIAHS 196 Query: 186 YQPLIIYCELAFVYLILTS 204 Y+ L ++C A VYL LT Sbjct: 197 YRTLDVFCLAAGVYLGLTG 215 >gi|167855355|ref|ZP_02478122.1| ArtM protein [Haemophilus parasuis 29755] gi|167853503|gb|EDS24750.1| ArtM protein [Haemophilus parasuis 29755] Length = 227 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 122/215 (56%), Gaps = 13/215 (6%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLL 71 Q + IV +P + + +SLI+ FF+AV F + ++ I++ ++ +F GTPLL Sbjct: 3 QEYFMVIVQGIPTSLLLTFVSLIVAFFLAVGMTFLLSMENRLVKGIVNGFLTLFTGTPLL 62 Query: 72 VQLFVIFYG---------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 VQ F+I+ G P ++ D++ +++L LN SAY + + ++ +IPKGQW Sbjct: 63 VQFFLIYAGPGQFPWIVASPFWSLLSDAWFCAMLTLALNSSAYTTLLFHGAVKAIPKGQW 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + A+GL+R QT++ I++P + + S+E I + K TS+ASTITI +I A+++ Sbjct: 123 ETCAALGLSRLQTLK-ILVPYALKRALPSYSNEIILVFKGTSLASTITIMDIMGYARQLY 181 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 T Y L IY VYL++T +I ++E V Sbjct: 182 GTEYDALTIYGLAGVVYLVITGIMTVILRRVERKV 216 >gi|326693633|ref|ZP_08230638.1| glutamine ABC transporter, permease protein [Leuconostoc argentinum KCTC 3773] Length = 213 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 127/215 (59%), Gaps = 10/215 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWI 64 N +++ P L+ + + +TL + I+ + S+ +G +A+ +F+ I +++ Y+W+ Sbjct: 2 NYLLEILPSLM-SGLKMTLGVFFITIIGSVPLGIIVALGMKSPYFT---IRWLINGYIWV 57 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLL+QL ++YGL +GI F F A I+ +N++AY++EI R + +IP+GQ+DA Sbjct: 58 MRGTPLLLQLIFVYYGLGMMGITFPRFEAATIAFIVNYAAYLAEIFRGGLQAIPRGQYDA 117 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + +G TR QT IILPQ I +E I+++K TS+ I + ++ + A I ++ Sbjct: 118 AKVLGFTRVQTFFKIILPQVIKIIVPSFGNEVINLVKDTSLVYVIGLGDLLR-AGNIAAS 176 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 L+ Y + +YL++T+ ++ + + S TQ Sbjct: 177 RDVTLVPYLLVGLIYLLMTA---VVTVLLRRSETQ 208 >gi|238784129|ref|ZP_04628143.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia bercovieri ATCC 43970] gi|238714975|gb|EEQ06973.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia bercovieri ATCC 43970] Length = 219 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 60/171 (35%), Positives = 107/171 (62%), Gaps = 5/171 (2%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLI----MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF 88 V++++ GFFI V+ I+ ++ S Y+ +FRGTP+L Q+ + FY +G+ Sbjct: 27 VVAIVAGFFIGVV-IYLMESGRSRFGRGFAQVYISLFRGTPVLAQVLLCFYLPGELGVSL 85 Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 ++A +++LTLN +AY S+I+RS +IP GQ +A+ GL+ +QT+ +I +PQ + + Sbjct: 86 PGYLAAVLALTLNTAAYQSQILRSGFAAIPPGQLEAAAMCGLSPRQTLWYIQIPQVLRLT 145 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 L SE I ++K+++V S I I ++ + Q++ S TY+PL +Y +A +Y Sbjct: 146 LPSLISELIDVIKASAVVSVIAITDLMRVGQQLASATYRPLEVYVAIALMY 196 >gi|259046648|ref|ZP_05737049.1| polar amino acid uptake (PAAT) family ABC superfamily ATP binding cassette transporter, permease protein [Granulicatella adiacens ATCC 49175] gi|259036813|gb|EEW38068.1| polar amino acid uptake (PAAT) family ABC superfamily ATP binding cassette transporter, permease protein [Granulicatella adiacens ATCC 49175] Length = 219 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 111/179 (62%), Gaps = 1/179 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL +A SFV I+GF + ++R + I F+V RGTP LV LF++++GLP Sbjct: 25 TLGVALTSFVFGTILGFILVLMRRS-RFRFLRWIATFHVSFMRGTPTLVFLFLLYFGLPF 83 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + I + V ++ ++ SAYISE++RS++ ++ GQW+A+ ++G++ +QT++ +I+PQ Sbjct: 84 LKITLPALVCALLCFSIASSAYISEVLRSAMDAVDNGQWEAAMSLGMSYRQTLQKVIVPQ 143 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + PLS+ + ++K +S+ + I++P+IFQ A+ + + +Y +A +Y I+ Sbjct: 144 AFRIAIPPLSNVLLDMIKGSSLVAMISLPDIFQNAKIVGGREQNYMTVYILVAIIYWII 202 >gi|325478268|gb|EGC81387.1| ABC transporter, permease protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 521 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 64/152 (42%), Positives = 97/152 (63%), Gaps = 1/152 (0%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIR 111 +I+ I+ YV IFRGTP++VQ +IFYGL + I + A I+ +++N AY+SE++R Sbjct: 340 LINWILGAYVEIFRGTPMMVQSVIIFYGLKQYFDIDLSTMFAAILIVSINTGAYLSEVVR 399 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I SI KGQ++A AIGL+ QT+ +ILPQTI T L +EF+ +K TSV + I++ Sbjct: 400 GGINSIDKGQFEACKAIGLSEAQTMTSVILPQTIRTILPSLGNEFVINIKDTSVLNVISV 459 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F ++ + +TYQ Y A +Y +LT Sbjct: 460 TELFFMSKSVAGSTYQYFPTYLITAVIYFVLT 491 >gi|270629479|ref|ZP_06221995.1| amino-acid ABC transporter permease protein [Haemophilus influenzae HK1212] gi|270317551|gb|EFA29010.1| amino-acid ABC transporter permease protein [Haemophilus influenzae HK1212] Length = 134 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 86/134 (64%), Gaps = 4/134 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF----FSDTIISL 56 M E + +I SF +L AI+ T+P+A ISF L I +AVI F ++ Sbjct: 1 MSAERADYVISSFWPMLEGAILYTIPLAVISFFCGLFIAVIVAVICTLPHPNFMTKLLQS 60 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I Y+ I RGTP+LVQ+F+IFYGLP +GI + F II+ ++N AY +E +R+SII+ Sbjct: 61 IGRAYISIIRGTPMLVQIFIIFYGLPEVGIKLEPFPTAIIAFSVNIGAYAAETVRASIIA 120 Query: 117 IPKGQWDASYAIGL 130 IPKGQW+ASYAIG+ Sbjct: 121 IPKGQWEASYAIGM 134 >gi|241759139|ref|ZP_04757247.1| ArtM protein [Neisseria flavescens SK114] gi|241320558|gb|EER56835.1| ArtM protein [Neisseria flavescens SK114] Length = 219 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 124/221 (56%), Gaps = 12/221 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-----IRIFFSDTIISLIMHFYVW 63 +ID+ P+ AA +TL ++ V+SL+ G +AV IR F++ + Y+ Sbjct: 6 LIDAIPKFADAA-KLTLELSVYGVVLSLLFGLPVAVVTAYRIRPFYA------LARAYIE 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + R TPLL+QLF ++YGLP +GI +D F +I+L ++Y++E +R+ I+++PKGQ + Sbjct: 59 LSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVIALVFLGASYMAEAVRAGILAVPKGQVE 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GL+R Q R++ LPQ + +++ + ++K TSV S + I E+ + ++ Sbjct: 119 AGKAVGLSRFQVFRYVELPQAWAVAFPAVAANVLFLMKETSVVSAVGIAELLFVTKDVIG 178 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 Y+ L YLI+ ++ ++E+ + + Y V Sbjct: 179 MDYKTNEALFLLFAAYLIILLPVSLLVRRLENRIRRAKYGV 219 >gi|6685719|sp|P72296|OCCM_RHIME RecName: Full=Octopine transport system permease protein occM gi|1519473|gb|AAB07519.1| OccM [Sinorhizobium meliloti] Length = 245 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 67/196 (34%), Positives = 115/196 (58%), Gaps = 10/196 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L A I + L +A S + ++ F +A++R+ + FY++ FRGTPLLVQ+++ Sbjct: 15 LLAGIPLALKLAVFSIAVGTVLAFSLALMRVS-RRWWLDFPARFYIFAFRGTPLLVQIYI 73 Query: 77 IFYGLPHI-GI--------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 I+YGL G+ + +++ + +L LN +AY +EI+R ++S+P GQ +A+ A Sbjct: 74 IYYGLSQFPGLRHSLLWPFLREAYWCALGALALNTAAYSAEIMRGGLLSVPAGQIEAARA 133 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G+ R R II+PQ I S+E + ++KSTS+ASTIT+ EI A +++S TY+ Sbjct: 134 CGMARVLLFRRIIIPQAIRQMLPGYSNEVVLMVKSTSLASTITLMEITGIAAKLISETYR 193 Query: 188 PLIIYCELAFVYLILT 203 P+ ++ +YL + Sbjct: 194 PVEVFACAGAIYLTMN 209 >gi|290968268|ref|ZP_06559811.1| ABC transporter, permease protein [Megasphaera genomosp. type_1 str. 28L] gi|290781750|gb|EFD94335.1| ABC transporter, permease protein [Megasphaera genomosp. type_1 str. 28L] Length = 216 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 68/191 (35%), Positives = 111/191 (58%), Gaps = 13/191 (6%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIM 58 M+Y W S + A + VTL I CI+ ++SL G ++V R + I I I+ Sbjct: 1 MEYVW------SIVPAIGAGLQVTLKIFCITIILSLPFGVLLSVGR---TSRIWGIRKII 51 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 Y++I RGTPL++Q+ I+YGLP + G+ F A II+ LN++AY +EI R I S Sbjct: 52 GIYIYIMRGTPLMLQILFIYYGLPFLVDGLRLPPFGAAIIAFVLNYAAYFAEIFRGGIQS 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ++ + +G+T QT+R I+LPQ + P+++E I++LK TS+ + + +I + Sbjct: 112 IGRGQYEGAKVLGMTYGQTMRRIVLPQVVKCVLPPVANETINLLKDTSLVYILAMNDILR 171 Query: 177 TAQRIVSTTYQ 187 + IV + Sbjct: 172 ITRSIVQRDFD 182 >gi|330684749|gb|EGG96444.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU121] Length = 486 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 68/182 (37%), Positives = 111/182 (60%), Gaps = 4/182 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRI-FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL- 81 T+ I+ I V+ I+G FIA++++ F +S I Y+ RGTPLLVQ+F++F+G Sbjct: 289 TILISFIGVVLGAILGAFIALMKLSKFKP--LSWIASIYIEFLRGTPLLVQVFIVFFGTT 346 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 +G+ + + I+L +N SAYI+EI R+ I SI KGQ +A+ ++GL+ QT++ +I+ Sbjct: 347 AALGLDISALICGTIALVINSSAYIAEIFRAGINSIDKGQTEAARSLGLSYNQTMKSVIM 406 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ I L +EF++++K +S+ STI + EI AQ + ++ P A +Y I Sbjct: 407 PQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAGMYFI 466 Query: 202 LT 203 LT Sbjct: 467 LT 468 >gi|322375331|ref|ZP_08049844.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. C300] gi|321279594|gb|EFX56634.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. C300] Length = 721 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 72/220 (32%), Positives = 127/220 (57%), Gaps = 10/220 (4%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+ +++ QLL + + +TL +A ISF I+++IG + + ++ LI +V + Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSL-RLISEIFVDV 560 Query: 65 FRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSIISI 117 RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I ++ Sbjct: 561 IRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQAV 620 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+FQT Sbjct: 621 PVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQT 680 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + I++ YQ +Y LA YL++ + + ++E + Sbjct: 681 GKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|255093160|ref|ZP_05322638.1| amino-acid ABC transporter, permease protein [Clostridium difficile CIP 107932] Length = 223 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 119/204 (58%), Gaps = 14/204 (6%) Query: 1 MKY--EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 MKY E F +I+ SF VT+ +A S V SLIIG +A + ++ +++ I Sbjct: 5 MKYFLELFPIIMKSFN--------VTVILAISSLVFSLIIGTIVA-LSSYYKVKVLNQIC 55 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSII 115 YV IFRGTPL+ QLF +++GL ++ D A I L+LN AY+SE IR+SI+ Sbjct: 56 KVYVSIFRGTPLMPQLFFLYFGLAYMNDFVKNMDPVFATSIVLSLNMGAYMSETIRASIL 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SI KGQ +A+Y +GLT QT++ I++PQ + + L + FI ++K +SVA + + +I Sbjct: 116 SIDKGQIEAAYVMGLTNLQTMKRIVIPQAVRVALPSLFNNFIDLIKGSSVAFVVGVNDIM 175 Query: 176 QTAQRIVSTTYQPLIIYCELAFVY 199 A+ + +++ +Y + +Y Sbjct: 176 GAAKSQGALSFKFFEVYGAVMVIY 199 >gi|115361199|ref|YP_778336.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria AMMD] gi|115286527|gb|ABI92002.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia ambifaria AMMD] Length = 297 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 14/204 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY-GL- 81 T+ + ++ + +++G AV+R+ S+ ++ I H Y+W+FRGTP+++QL + F GL Sbjct: 81 TIVMTVLAMTLGVVLGVVTAVMRLS-SNPVLGAIAHGYIWLFRGTPVILQLLLWFNLGLV 139 Query: 82 -PHIGI----------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P +GI V F+A ++ L +N AY SE++R+ ++S+ GQ++A+ +IG+ Sbjct: 140 FPTLGIPGIAEYRTVDVMTPFLAAVLGLGINQGAYTSEVVRAGLLSVDTGQYEAAKSIGM 199 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 R Q +R IILPQ + P+ +E I ++K TS+AS + E+ AQ I + + Sbjct: 200 ARLQALRRIILPQAMRVIVPPIGNELIGMVKLTSLASVVQYAEMLHNAQNIYYANARVIE 259 Query: 191 IYCELAFVYLILTSFCYIIQIKIE 214 + YL + + + Q ++E Sbjct: 260 LLIVAGIWYLAIVTVLSLAQARVE 283 >gi|315613252|ref|ZP_07888162.1| glutamine ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus sanguinis ATCC 49296] gi|315314814|gb|EFU62856.1| glutamine ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus sanguinis ATCC 49296] Length = 721 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 72/220 (32%), Positives = 127/220 (57%), Gaps = 10/220 (4%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+ +++ QLL + + +TL +A ISF I+++IG + + ++ LI +V + Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSL-RLISEIFVDV 560 Query: 65 FRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSIISI 117 RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I ++ Sbjct: 561 IRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQAV 620 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+FQT Sbjct: 621 PVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQT 680 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + I++ YQ +Y LA YL++ + + ++E + Sbjct: 681 GKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|239833272|ref|ZP_04681600.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239821335|gb|EEQ92904.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 241 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 68/202 (33%), Positives = 119/202 (58%), Gaps = 11/202 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 DSF +L I +TL + +S + ++ +A +R+ + I+ LI Y+++ RGTPL Sbjct: 11 DSFVELCRG-IPLTLQLMALSVISGAVLATILATMRLS-GNLILDLIARGYIFVLRGTPL 68 Query: 71 LVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIISIPKGQ 121 LVQL++I+YGL + SF+ +++L LN +AY +EIIR ++S+ GQ Sbjct: 69 LVQLYIIYYGLSQFPELRRSFLWPFLREPYWCAVLALALNTAAYSAEIIRGGVLSVATGQ 128 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ A G++ +R I+ PQ + S+E I ++KST++ASTIT+ E+ A ++ Sbjct: 129 IEAARAYGMSGFTLVRRILAPQALRQMLPAYSNEVILMVKSTALASTITMMEVTGLAAKL 188 Query: 182 VSTTYQPLIIYCELAFVYLILT 203 +S TY+P+ ++ +YL+L Sbjct: 189 ISATYRPVEVFICAGAIYLLLN 210 >gi|260463005|ref|ZP_05811208.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259031126|gb|EEW32399.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 255 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 66/197 (33%), Positives = 115/197 (58%), Gaps = 2/197 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F I++ P L +V T+ ++ +SFV +LI+G + + + + + Y+ Sbjct: 39 FRTIVEYLP-LFGQGLVTTVWLSALSFVGALIVGIVLCAMGLQ-RGWLFRVPAKAYIDAV 96 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL QL+ +++GLP +G V V I++L+LN AY++EIIR+ I+SIP+GQ +AS Sbjct: 97 RATPLLAQLYFLYFGLPRLGFVLPELVVGILALSLNSGAYVAEIIRAGILSIPRGQVEAS 156 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A G+T Q +R ++LPQ + PL + I ++K +++ S I++ E+ + Q + S Sbjct: 157 VASGMTYVQRMRLVVLPQAFKVTIPPLLGQAIVLVKDSALLSLISVAELTRAGQLLASDR 216 Query: 186 YQPLIIYCELAFVYLIL 202 + P + +A YL+L Sbjct: 217 FMPAEGFLTIAAFYLLL 233 >gi|328552037|gb|AEB22529.1| YxeN [Bacillus amyloliquefaciens TA208] Length = 224 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 126/222 (56%), Gaps = 12/222 (5%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHF 60 +W + +FP L+ A+ +TL +A + V ++I G +A+I RI ++ + Sbjct: 5 DW-GFMFSAFPALI-EALPITLVMAVAAMVFAVIGGLILALITKNRI----PVLHQLSKV 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GI-VFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 Y+ FRG P LVQLF+I+YGLP + G+ + A II L+L +AY++EI R+++ S+ Sbjct: 59 YISFFRGVPTLVQLFLIYYGLPQLFPGMSKMTALTAAIIGLSLKNAAYLAEIFRAALNSV 118 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 +GQ +A ++G+T+ Q R II PQ I + + FI +LK TS+A T+ + E+F Sbjct: 119 DEGQLEACLSVGMTKSQAYRRIIFPQAIRNALPATGNTFIGLLKETSLAFTLGVMEMFAQ 178 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + S + Y +A +Y ILT ++Q +E ++++ Sbjct: 179 GKMYASGNLKYFETYLAVAIMYWILTIIYSVLQDLLERAISK 220 >gi|126699791|ref|YP_001088688.1| amino-acid ABC transporter permease [Clostridium difficile 630] gi|255101313|ref|ZP_05330290.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-63q42] gi|255307189|ref|ZP_05351360.1| amino-acid ABC transporter, permease protein [Clostridium difficile ATCC 43255] gi|115251228|emb|CAJ69059.1| ABC-type transport system,cystine/aminoacid-family permease [Clostridium difficile] Length = 220 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 77/225 (34%), Positives = 127/225 (56%), Gaps = 14/225 (6%) Query: 1 MKY--EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 MKY E F I+ SF VT+ +A S V SLIIG +A + ++ +++ I Sbjct: 5 MKYFLELFPTIMKSFN--------VTVILAISSLVFSLIIGTIVA-LSSYYKVKVLNQIC 55 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSII 115 YV IFRGTPL+ QLF +++GL ++ D A I L+LN AY+SE IR+SI+ Sbjct: 56 KVYVSIFRGTPLMPQLFFLYFGLAYMSDFVKNMDPVFATSIVLSLNMGAYMSETIRASIL 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SI GQ +A+YA+GLT QT++ I++PQ + + L + FI ++K +SVA + + +I Sbjct: 116 SIDTGQIEAAYAMGLTNLQTMKRIVIPQAVRVALPSLFNNFIDLIKGSSVAFVVGVNDIM 175 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 A+ + +++ +Y + +Y + + Q K+E ++ + Sbjct: 176 GAAKSQGALSFKFFEVYGAVMVIYWCIITPLGWGQKKLEKKISNY 220 >gi|170017622|ref|YP_001728541.1| ABC-type amino acid transport system, permease component [Leuconostoc citreum KM20] gi|169804479|gb|ACA83097.1| ABC-type amino acid transport system, permease component [Leuconostoc citreum KM20] Length = 213 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 123/214 (57%), Gaps = 7/214 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFI--AVIRIFFSDTIISLIMHFYVWI 64 N ++ P LL + + +TL + ++ V S+ +G + + +F+ I +++ Y+WI Sbjct: 2 NYFLNILPSLL-SGLKMTLGVFFLTIVGSVPLGIIVSLGMKSEYFT---IRWLINGYIWI 57 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLL+QL ++YGL +GI F F A I+ +N+ AY++EI R + ++P+GQ+DA Sbjct: 58 MRGTPLLLQLIFVYYGLGMMGITFPRFEAAAIAFIINYGAYLAEIFRGGLQAVPRGQYDA 117 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + +GL + QT IILPQ I +E I+++K TS+ I + +I + A I ++ Sbjct: 118 AKVLGLNKVQTFFKIILPQVIKIVVPSFGNEIINLVKDTSLVYVIGLGDILR-AGNIAAS 176 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 L+ Y + +YL++T+ ++ + ES + Sbjct: 177 RDVTLVPYLLVGMIYLLMTAIVTVLLKQSESRLN 210 >gi|319783615|ref|YP_004143091.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169503|gb|ADV13041.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 273 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 121/212 (57%), Gaps = 12/212 (5%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + IS V+ I+ +A R+ S+ I+S + + YV+ FRGTPLLVQ ++++ Sbjct: 61 SGLGVTLALVSISMVLGAILSVPVAYGRMS-SNRILSGLAYCYVYFFRGTPLLVQTYLVY 119 Query: 79 YGLPHIGIVF----------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 YGL + D+F + + LN +AY +EI+R +I S+P+GQW+ + ++ Sbjct: 120 YGLGSFRVELQSVGLWDFFKDAFNCGVFAFALNTAAYQAEILRGAIESVPRGQWEGAASL 179 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL + QT+R IILPQ + + P +E I ++K++++ + IT+ ++ A+ + ++ Sbjct: 180 GLHKLQTLRKIILPQALIVALRPYGNELILMVKASAIVAIITVYDLMGNAKLAFANSFD- 238 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + Y +A VYL++ IE +T H Sbjct: 239 IQAYIWVALVYLVMVEILRHGVEWIERRITVH 270 >gi|254229165|ref|ZP_04922584.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25] gi|262395515|ref|YP_003287368.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25] gi|151938250|gb|EDN57089.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25] gi|262339109|gb|ACY52903.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25] Length = 265 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 124/193 (64%), Gaps = 6/193 (3%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII-SLIMHFYVWIFRGTPLL 71 +P L ++VTL I+ IS +L++G A++R+ SD+ + ++I YV + R TPLL Sbjct: 56 WPAELIDGLLVTLNISAISLFFTLVLGLVTALLRL--SDSKVGNVIGATYVEVIRNTPLL 113 Query: 72 VQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 VQ++++++ P IG+ D F +++L+L AY +EI+R+ + SIPKGQ++A+ +GL Sbjct: 114 VQIYLLYFVFGPVIGL--DRFSTAVLALSLFQGAYTAEILRAGLNSIPKGQFEAAQTLGL 171 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + T + +ILPQ + + PL++E +S++K++S+ S + I ++ A+ IVS T P Sbjct: 172 SPFYTYKDVILPQVLQRTLPPLTNEVVSLIKNSSIVSVMAIFDLTTQARNIVSETAMPFE 231 Query: 191 IYCELAFVYLILT 203 I+ +A +YL LT Sbjct: 232 IWFTVAAIYLALT 244 >gi|323127705|gb|ADX25002.1| Putative amino acid ABC transporter [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 228 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 61/177 (34%), Positives = 106/177 (59%), Gaps = 10/177 (5%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIF-----YGLPHIG-----IVFDSFVAIIISLTLNFS 103 ++ +++ YVWIFRGTP++VQ+ + F +P IG + F + II ++LN Sbjct: 49 LTWLVNTYVWIFRGTPMVVQIMIAFAWMYFNQMPTIGFGVLNLDFSRLLPGIIIISLNSG 108 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AYISEI+R+ I ++PKGQ +A+Y++G+ + +R++ILPQ L +EFI+I+K + Sbjct: 109 AYISEIVRAGIEAVPKGQLEAAYSLGIRPRNAMRYVILPQAFKNILPALGNEFITIIKDS 168 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ TI + E++ AQ + + TY P+ AF YL++T+ + +E + Q Sbjct: 169 ALLQTIGVMELWNGAQSVATATYSPIAPLLVAAFYYLMVTTVLSQLLAVLERRMAQG 225 >gi|306829599|ref|ZP_07462789.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein/permease protein [Streptococcus mitis ATCC 6249] gi|304428685|gb|EFM31775.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein/permease protein [Streptococcus mitis ATCC 6249] Length = 721 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 72/220 (32%), Positives = 127/220 (57%), Gaps = 10/220 (4%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+ +++ QLL + + +TL +A ISF I+++IG + + ++ LI +V + Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSL-RLISEIFVDV 560 Query: 65 FRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSIISI 117 RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I ++ Sbjct: 561 IRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQAV 620 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+FQT Sbjct: 621 PVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQT 680 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + I++ YQ +Y LA YL++ + + ++E + Sbjct: 681 GKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|293365541|ref|ZP_06612250.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] gi|307703498|ref|ZP_07640440.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] gi|291315909|gb|EFE56353.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] gi|307622905|gb|EFO01900.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] Length = 721 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 72/220 (32%), Positives = 127/220 (57%), Gaps = 10/220 (4%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+ +++ QLL + + +TL +A ISF I+++IG + + ++ LI +V + Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSL-RLISEIFVDV 560 Query: 65 FRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSIISI 117 RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I ++ Sbjct: 561 IRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQAV 620 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+FQT Sbjct: 621 PVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQT 680 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + I++ YQ +Y LA YL++ + + ++E + Sbjct: 681 GKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|150398046|ref|YP_001328513.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150029561|gb|ABR61678.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 323 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 121/210 (57%), Gaps = 1/210 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F I L+ +V TL I+ IS ++ +I A+ ++ + I L FY +F Sbjct: 107 FAFIAKKISFLISQGVVTTLYISVISIAVATVIALLGAIAKLSRNGVIYGL-ATFYTSLF 165 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG PLL+Q+++I+ GLP +G V + A I++L+L + AY++EI R+ I SIP+GQ + + Sbjct: 166 RGLPLLMQIYIIYLGLPQVGYVISAVPAGILALSLCYGAYMTEIFRAGIESIPRGQSEGA 225 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL+ QT+ +ILPQ + P ++FI++LK +S+ S + + E+ A+ T Sbjct: 226 TALGLSPSQTMGLVILPQAMRVIIPPTGNQFIAMLKDSSLISVVGVWELMYLARTQGQTE 285 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIES 215 ++ + + + +Y IL+ IQ +IE+ Sbjct: 286 FRHIEMLITASMIYWILSIGLEFIQSRIEA 315 >gi|94988394|ref|YP_596495.1| cystine transport system permease protein [Streptococcus pyogenes MGAS9429] gi|94992276|ref|YP_600375.1| cystine transport system permease protein [Streptococcus pyogenes MGAS2096] gi|94541902|gb|ABF31951.1| cystine transport system permease protein [Streptococcus pyogenes MGAS9429] gi|94545784|gb|ABF35831.1| Cystine transport system permease protein [Streptococcus pyogenes MGAS2096] Length = 216 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 57/151 (37%), Positives = 97/151 (64%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +I ++ Y+ I RG P++V LFV+++GLP+ G+ + + + ++ +AYISE+ RS Sbjct: 49 LIHYLVRAYISIMRGVPMIVVLFVLYFGLPYYGLELPALLCAYLGFSMVSAAYISEVFRS 108 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 SI +I KGQW+A+ A+GL ++ IILPQ + PL + I ++KS+S+A+ IT+P Sbjct: 109 SIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIAVPPLGNVIIDMVKSSSLAAMITVP 168 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +IFQ A+ I + + +Y +AF+Y I+ Sbjct: 169 DIFQNAKIIGGREWDYMSMYILVAFIYWIIA 199 >gi|116617692|ref|YP_818063.1| ABC-type amino acid transport system, permease component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096539|gb|ABJ61690.1| amino acid ABC transporter membrane protein, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 213 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 60/162 (37%), Positives = 100/162 (61%), Gaps = 1/162 (0%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 I +++ Y+WI RGTPLL+QL I+YGL +GI F F A II+ +N++AY++EI R Sbjct: 47 IRWLINGYIWIMRGTPLLLQLIFIYYGLGMMGIAFPRFEAAIIAFIINYAAYLAEIFRGG 106 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + S+P+GQ+DA+ +G ++ QT IILPQ I +E I+++K TS+ I + + Sbjct: 107 LQSVPRGQYDAAKVLGFSKIQTFFKIILPQVIKIVVPSFGNEVINLVKDTSLVYVIGLGD 166 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 I + A I ++ L+ Y + +YLI+T+ ++ + E+ Sbjct: 167 ILR-AGNIAASRDVTLMPYLLVGLIYLIMTAVVTLLLRRSET 207 >gi|331266285|ref|YP_004325915.1| polar amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus oralis Uo5] gi|326682957|emb|CBZ00574.1| polar amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus oralis Uo5] Length = 721 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 72/220 (32%), Positives = 127/220 (57%), Gaps = 10/220 (4%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+ +++ QLL + + +TL +A ISF I+++IG + + ++ LI +V + Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSL-RLISEIFVDV 560 Query: 65 FRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSIISI 117 RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I ++ Sbjct: 561 IRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQAV 620 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+FQT Sbjct: 621 PVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQT 680 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + I++ YQ +Y LA YL++ + + ++E + Sbjct: 681 GKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|251782901|ref|YP_002997204.1| arginine transport system permease [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391531|dbj|BAH81990.1| arginine transport system permease protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|322412233|gb|EFY03141.1| Putative amino acid ABC transporter [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 228 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 61/176 (34%), Positives = 106/176 (60%), Gaps = 10/176 (5%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIF-----YGLPHIG-----IVFDSFVAIIISLTLNFS 103 ++ +++ YVWIFRGTP++VQ+ + F +P IG + F + II ++LN Sbjct: 49 LTWLVNTYVWIFRGTPMVVQIMIAFAWMHFNQMPTIGFGVLNLDFSRLLPGIIIISLNSG 108 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AYISEI+R+ I ++PKGQ +A+Y++G+ + +R++ILPQ L +EFI+I+K + Sbjct: 109 AYISEIVRAGIEAVPKGQLEAAYSLGIRPRNAMRYVILPQAFKNILPALGNEFITIIKDS 168 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 ++ TI + E++ AQ + + TY P+ AF YL++T+ + +E + Q Sbjct: 169 ALLQTIGVMELWNGAQSVATATYSPIAPLLVAAFYYLMVTTVLSQLLAVLERRMAQ 224 >gi|227432438|ref|ZP_03914426.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351804|gb|EEJ42042.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 222 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 60/162 (37%), Positives = 100/162 (61%), Gaps = 1/162 (0%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 I +++ Y+WI RGTPLL+QL I+YGL +GI F F A II+ +N++AY++EI R Sbjct: 56 IRWLINGYIWIMRGTPLLLQLIFIYYGLGMMGIAFPRFEAAIIAFIINYAAYLAEIFRGG 115 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + S+P+GQ+DA+ +G ++ QT IILPQ I +E I+++K TS+ I + + Sbjct: 116 LQSVPRGQYDAAKVLGFSKIQTFFKIILPQVIKIVVPSFGNEVINLVKDTSLVYVIGLGD 175 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 I + A I ++ L+ Y + +YLI+T+ ++ + E+ Sbjct: 176 ILR-AGNIAASRDVTLMPYLLVGLIYLIMTAVVTLLLRRSET 216 >gi|307246615|ref|ZP_07528686.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255600|ref|ZP_07537405.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260051|ref|ZP_07541763.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852487|gb|EFM84721.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861449|gb|EFM93438.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865887|gb|EFM97763.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 219 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 62/179 (34%), Positives = 107/179 (59%), Gaps = 2/179 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I++ P+ + AAI+ TL ++ ++SLI G IA++ + L Y+ + R T Sbjct: 6 VINAIPRFIDAAII-TLQLSFWGILLSLIFGLLIAIVTAYQVKPFYGL-ARGYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF ++YGLP IGI +D F II+L ++Y++E +R+ ++++PKGQ +A+ AI Sbjct: 64 PLLIQLFFLYYGLPKIGIKWDGFTCGIIALVFLGASYMAEALRAGLLAVPKGQTEAAKAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GL R Q R++I PQ S + + + ++K TSV S + + E+ + I+ Y+ Sbjct: 124 GLNRFQVFRYVIFPQAWAVSIPAIGANVLFLIKETSVISAVAVAELMFVTKDIIGMDYK 182 >gi|209516319|ref|ZP_03265176.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209503255|gb|EEA03254.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 218 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 60/168 (35%), Positives = 100/168 (59%), Gaps = 6/168 (3%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I+ YV +F+GTPLL+QLF+ F+GLP IGI + A ++LTL SAY+ +I R + + Sbjct: 52 IVVLYVEVFQGTPLLMQLFLAFFGLPLIGIDVSPWAAATVTLTLYTSAYLVDIWRGCVEA 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQW A ++G+T Q +R+I+ PQ + + P + ++KST++AS I E+ + Sbjct: 112 VPRGQWAAGASLGMTFGQQLRYIVWPQALKIAVAPTVGFLVQVVKSTALASIIGFTELTK 171 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIESSVTQH 220 T I + ++P IY +A +Y LT + +++ + V QH Sbjct: 172 TGTMITNAAFRPFPIYGMVAMIYFAMCFPLTWYARVLEKR--QKVGQH 217 >gi|146310955|ref|YP_001176029.1| glutamine ABC transporter permease protein [Enterobacter sp. 638] gi|145317831|gb|ABP59978.1| L-glutamine ABC transporter membrane protein [Enterobacter sp. 638] Length = 219 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 125/220 (56%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P LL A +TL I+ + LIIG R + I + I Sbjct: 1 MQFDW-SAIWPAIPLLLEGA-KMTLWISVLGLAGGLIIGLVAGFAR-SYGGWIANHIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R++TIRH+ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFSEAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A VYLI+T + ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVVYLIITLLLSFVLRRLERRMK 217 >gi|330991448|ref|ZP_08315399.1| Inner membrane amino-acid ABC transporter permease protein yecS [Gluconacetobacter sp. SXCC-1] gi|329761467|gb|EGG77960.1| Inner membrane amino-acid ABC transporter permease protein yecS [Gluconacetobacter sp. SXCC-1] Length = 522 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 68/197 (34%), Positives = 115/197 (58%), Gaps = 6/197 (3%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL +A +S + +++I +A+ + + ++ L++ YV +FRG P L+QL I+ LP Sbjct: 311 ITLTVAVLSHLTAIMISIPMALA-LNGRNAMLGLVLKGYVSVFRGAPTLLQLLFIWNALP 369 Query: 83 HIGIVFDS-----FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 +F F+A ISL++N SAY EI R+++ ++ +GQ A A+GL+R+Q R Sbjct: 370 QFLPIFREGWFTPFLATWISLSINESAYQVEINRAALAAVDRGQELAGDALGLSRRQVYR 429 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 H+I PQ + + P + FIS+LK+TS+AS I++PE+ Q V+ T++ Y Sbjct: 430 HVIFPQALRIALPPTMNAFISLLKTTSLASVISLPELLAVTQMEVARTFEFTEYYAAALV 489 Query: 198 VYLILTSFCYIIQIKIE 214 YL + F +Q +IE Sbjct: 490 YYLGMVFFLLFVQKRIE 506 >gi|307708790|ref|ZP_07645252.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus mitis NCTC 12261] gi|307615156|gb|EFN94367.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus mitis NCTC 12261] Length = 275 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 71/221 (32%), Positives = 127/221 (57%), Gaps = 13/221 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVW 63 + L+ +++ QLL + + +TL +A ISF I+++IG + + + S +IS +V Sbjct: 58 WGLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVIS---EIFVD 113 Query: 64 IFRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + RG PL++ IF+G+P+ + FVA I+L+LN +AYI+EI+R I + Sbjct: 114 VIRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQA 173 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+FQ Sbjct: 174 VPVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQ 233 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 T + I++ YQ +Y LA YL++ + + ++E + Sbjct: 234 TGKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 274 >gi|305663949|ref|YP_003860237.1| polar amino acid ABC transporter, inner membrane subunit [Ignisphaera aggregans DSM 17230] gi|304378518|gb|ADM28357.1| polar amino acid ABC transporter, inner membrane subunit [Ignisphaera aggregans DSM 17230] Length = 228 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 69/185 (37%), Positives = 119/185 (64%), Gaps = 1/185 (0%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 LI++++ ++ A + +T I SF++ ++G IA+ R+F I +I +V + RG Sbjct: 8 LIVENYGNMIIAGLAMTFFITLSSFILGFLLGLIIAITRVF-GPKFIGMIFTTFVELIRG 66 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TP++VQLF ++Y LP++GI ++ +I+++LN +AY SE +R SI SIP Q +ASY+ Sbjct: 67 TPMMVQLFFVYYALPYLGIKLSPLLSALIAISLNSAAYQSEYLRVSISSIPSSQIEASYS 126 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GLT+ QTI I++PQ I + L++E + + K +S+A IT+PE+ + I S T++ Sbjct: 127 LGLTKTQTILSIVIPQCIRIAIPALTNEAVYLFKYSSIAYFITVPELMYISMYIGSRTFR 186 Query: 188 PLIIY 192 + IY Sbjct: 187 YIEIY 191 >gi|313497021|gb|ADR58387.1| Polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida BIRD-1] Length = 263 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 128/218 (58%), Gaps = 10/218 (4%) Query: 6 FNLIIDSFPQL---------LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 F +I++ FP L +TL + S V+S+++GF A+ R+ S ++ Sbjct: 38 FAIILEKFPNLAGFKLGPNGFLQGAALTLFLCLCSMVVSVLLGFAAALARLSNSAVLVG- 96 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + FY FRGTPLL+Q+ +I+ GLP +G+V + A II+L+LN+ AY+SEI R+ I+ Sbjct: 97 VASFYTSFFRGTPLLIQILLIYLGLPQVGLVPGAISAGIIALSLNYGAYLSEIFRAGILG 156 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + +GQ +A+ A+G+ Q HIILPQ + P +++FIS+LK +S+ S + + E+ Sbjct: 157 VARGQREAALALGMRTPQIFCHIILPQAMRVIIPPTANQFISMLKDSSLISVMGVWEVMF 216 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 AQ ++Y+ L + A +Y +L+ ++Q ++E Sbjct: 217 LAQSYGRSSYRYLEMLTTAAVIYWVLSILLELLQARLE 254 >gi|307289497|ref|ZP_07569443.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|306499515|gb|EFM68886.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|315164602|gb|EFU08619.1| ABC transporter, permease protein [Enterococcus faecalis TX1302] Length = 214 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 58/159 (36%), Positives = 98/159 (61%), Gaps = 1/159 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +++ Y+W+ RGTPLL+QL +FYGLP IGIVF+ + A + + LN++AY +EI R I + Sbjct: 51 LINLYIWLMRGTPLLLQLIFVFYGLPLIGIVFERYDAALFAFILNYAAYFAEIFRGGIQA 110 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQ++A+ + LTR QT+ IILPQ + + +E I+++K TS+ + + ++ + Sbjct: 111 IPQGQYEAAKVLRLTRFQTVTRIILPQVVKIVLPSVGNEIINLVKDTSLIYVLGLGDLLR 170 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 A +I + L+ + +YL T+ + KIE Sbjct: 171 -AGKIAMSRDVTLVPLALVGVIYLFFTAILTVASKKIEK 208 >gi|116255278|ref|YP_771111.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259926|emb|CAK03020.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 213 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 116/194 (59%), Gaps = 3/194 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ + FV I G +A+ R ++ + Y+ +F+GTPLL+QLFV++YGL Sbjct: 16 TVLLSAVGFVCGGIAGLGVALARAS-GIPLLERVTAGYIAVFQGTPLLMQLFVVYYGLAL 74 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G++ DS+VA+ I LTL+ SAY+ EI R SI ++P+GQ +A+ A+ L ++ +ILPQ Sbjct: 75 VGLMLDSWVAVAIGLTLHASAYLGEIWRGSIEAVPRGQTEAAKALSLRYISRMKDVILPQ 134 Query: 144 TITTSAVPLSSEF-ISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + S +P + F + ++K TS+AS + E+ + I + +QPL ++ + +Y ++ Sbjct: 135 ALRIS-LPATIGFLVQLIKGTSLASIVGFTELTRAGNIISNQIFQPLTVFGIVGILYFLM 193 Query: 203 TSFCYIIQIKIESS 216 I+ ++E Sbjct: 194 CCPLTILGARLERK 207 >gi|319950980|ref|ZP_08024851.1| putative ABC transporter permease [Dietzia cinnamea P4] gi|319435362|gb|EFV90611.1| putative ABC transporter permease [Dietzia cinnamea P4] Length = 327 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 71/224 (31%), Positives = 127/224 (56%), Gaps = 26/224 (11%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL----- 74 A+ T+ + +S +++++G ++V+R+ ++ ++ + Y+WIFRGTP+ VQL Sbjct: 70 AVFYTIALTVLSMTLAVVLGVILSVMRMS-ANPVLKAVAWVYLWIFRGTPVYVQLLFWGL 128 Query: 75 -FVIF----YGLPHIGIVF----------DSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 F I+ +G+P I F +F ++ L +N +AY++EI+R+ I S+P+ Sbjct: 129 IFTIYRQVQFGIPFTDIDFIRFDDTMVLYSAFWLAVVGLAMNEAAYMAEIVRAGISSVPE 188 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP---EIFQ 176 GQ +AS A+G+T QT+R ILPQ + P +EFIS+LK+TS+ + IP E++ Sbjct: 189 GQAEASTALGMTWGQTMRRTILPQAMRVIIPPTGNEFISMLKTTSL--VVAIPFSGELYG 246 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 A+ I +QP+ + A YL++TS + Q +E ++ Sbjct: 247 QARDISGVNFQPIPLLLVAATWYLVITSVLMVGQHFLEKRFSRG 290 >gi|312866757|ref|ZP_07726971.1| putative arginine ABC transporter, permease protein ArtQ [Streptococcus parasanguinis F0405] gi|311097838|gb|EFQ56068.1| putative arginine ABC transporter, permease protein ArtQ [Streptococcus parasanguinis F0405] Length = 218 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 125/222 (56%), Gaps = 15/222 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVW 63 L+ +++ QLL + + VTL +A +SF I+++IG VI FS + + +V Sbjct: 2 GLLQNNYKQLL-SGLGVTLALALLSFAIAMVIG----VIFGMFSVSPYKWLRWTAEIFVD 56 Query: 64 IFRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + RG PL++ IF+G+P++ + FVA I+L+LN +AYI+EI+R I + Sbjct: 57 VIRGIPLMILAAFIFWGIPNLIESVTGHQSPINDFVAGTIALSLNAAAYIAEIVRGGIQA 116 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+FQ Sbjct: 117 VPAGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQ 176 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 T + I++ YQ +Y LA YL++ + K+E V Sbjct: 177 TGKIIIARNYQSFKMYAILAVFYLVIITLLTRFAKKLEKKVN 218 >gi|317487125|ref|ZP_07945928.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] gi|316921609|gb|EFV42892.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] Length = 339 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 62/183 (33%), Positives = 109/183 (59%), Gaps = 1/183 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++ +S + L + TL + I+ + + +G F+ ++R FF + +++ + YV +F Sbjct: 123 FEILGESGMKALAGGFMTTLEVGIIATLCAFWLGVFLTLVR-FFENKVMTGFVKVYVDVF 181 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R P +V + +I YG P IGI V+ I++LTLN SA+ SEI+RS + ++ GQ +A+ Sbjct: 182 RALPTIVLVSLIHYGAPFIGIYLPLMVSGILTLTLNHSAFFSEILRSGVSAVGHGQLEAA 241 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++GL +T R I+ PQ T+ PL+ +F+++LK T + S + IPE+ + A + S T Sbjct: 242 RSLGLGTFKTFRLIVFPQAFKTAMPPLTGQFVALLKETVICSVVGIPELLREALVVQSWT 301 Query: 186 YQP 188 P Sbjct: 302 ANP 304 >gi|227820555|ref|YP_002824526.1| amino acid ABC transporter permease [Sinorhizobium fredii NGR234] gi|227339554|gb|ACP23773.1| amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 220 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 108/187 (57%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + P L+ + +T+ + ++ +IG A++R+ + I+ F Sbjct: 1 MEWDW-EFVRQIMPTLI-EGLQITILATILGAAVAAVIGLVFAILRMV-APRPIARATSF 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V RGTPLLVQL+ IFY LP IGI + VA +I L +++ Y +E+ R+ I ++P+G Sbjct: 58 AVEFIRGTPLLVQLYFIFYVLPDIGIRLPALVAGVIGLGIHYGTYAAEVYRAGIENVPRG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A LT +QT H+ILPQ I L++ I++ K T + S IT+ E+ A+ Sbjct: 118 QWEAAKATNLTARQTWIHVILPQAIPPMIPALANYLIAMFKETPLLSAITVLELMNQAKS 177 Query: 181 IVSTTYQ 187 I ++ Y+ Sbjct: 178 IANSNYR 184 >gi|317047480|ref|YP_004115128.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316949097|gb|ADU68572.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 219 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 127/220 (57%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W ++I + P LL A +TL I+ + V LIIG R + I + I Sbjct: 1 MEFDW-SVIWPALPILLEGA-KMTLIISVLGLVGGLIIGLVAGFARAY-GGWIANNIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIELIRGTPIVVQVMFIYFALPMAFPDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIN 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R++T+R++I+P + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSRRETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A +YL++T + +IE V Sbjct: 178 QEIIAGNFRALEIWSAVAIIYLVITLVLSFVLRRIEKRVK 217 >gi|261379484|ref|ZP_05984057.1| amino acid ABC transporter, permease protein [Neisseria subflava NJ9703] gi|319638914|ref|ZP_07993672.1| ABC transporter [Neisseria mucosa C102] gi|284797944|gb|EFC53291.1| amino acid ABC transporter, permease protein [Neisseria subflava NJ9703] gi|317399818|gb|EFV80481.1| ABC transporter [Neisseria mucosa C102] Length = 219 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 63/184 (34%), Positives = 109/184 (59%), Gaps = 12/184 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-----IRIFFSDTIISLIMHFYVW 63 +ID+ P+ + AA +TL ++ V+SL+ G +AV IR F++ + Y+ Sbjct: 6 LIDAIPKFVDAA-KLTLELSVYGVVLSLLFGLPVAVVTAYRIRPFYA------LARAYIE 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + R TPLL+QLF ++YGLP +GI +D F +I+L ++Y++E IR+ I+++PKGQ + Sbjct: 59 LSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVIALVFLGASYMAEAIRAGILAVPKGQIE 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A AIGL+R Q R++ LPQ + + + + ++K TS+ S + I E+ + I+ Sbjct: 119 AGKAIGLSRFQVFRYVELPQAWAVAVPAIGANVLFLMKETSIVSAVGIAELLFVTKDIIG 178 Query: 184 TTYQ 187 Y+ Sbjct: 179 MDYK 182 >gi|254477959|ref|ZP_05091344.1| ABC-type glutamine transport system, permease component [Ruegeria sp. R11] gi|214028544|gb|EEB69380.1| ABC-type glutamine transport system, permease component [Ruegeria sp. R11] Length = 254 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 73/194 (37%), Positives = 114/194 (58%), Gaps = 7/194 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L + + T+ I+ I+ VIS+++G +A+ + ++ YV + R PLL L Sbjct: 41 KFLISGMGDTILISVIAAVISIVLGLLVALPGLS-EKRGWRIVNRVYVELIRAIPLLPML 99 Query: 75 FVIFYGLP------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 F +FYGLP + + D F II+L L+ SA+ +EI R+ I SI KGQ +A+ + Sbjct: 100 FWVFYGLPIIFRSMGLNVPIDPFWGAIITLALSDSAFTAEIYRAGIQSIAKGQREAAQTV 159 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+ QT+R++ILPQ I PL+++FI I+K ++ AS I + E+ + A +V T Y+P Sbjct: 160 GLSYAQTMRYVILPQAIRRILPPLANQFIYIVKMSAFASVIGMQELTRRANELVVTEYRP 219 Query: 189 LIIYCELAFVYLIL 202 L IY L YLIL Sbjct: 220 LEIYTLLILEYLIL 233 >gi|270307788|ref|YP_003329846.1| amino acid ABC transporter, permease protein [Dehalococcoides sp. VS] gi|270153680|gb|ACZ61518.1| amino acid ABC transporter, permease protein [Dehalococcoides sp. VS] Length = 273 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 66/196 (33%), Positives = 113/196 (57%), Gaps = 15/196 (7%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + ++ I +T+ +A +S+ + LI G F A+ R+ +TI+ + FYV I RG PLLVQL Sbjct: 54 KYVWVGIGITVLVAVVSYFLMLIFGLFGALGRLS-KNTILRGLATFYVEIVRGIPLLVQL 112 Query: 75 FVIFYGLPHI------GIVF--------DSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 ++ P I G+ F + V I +T + AY+SEI R+ I SIPKG Sbjct: 113 IWWYFAFPVIIQSIGQGLNFGPMMNYQANPIVMAIWGMTFCYGAYMSEIYRAGIQSIPKG 172 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++G++ Q +R +ILPQ + P+ +EFIS+LK TS+ ST+ + ++ + + Sbjct: 173 QMEAARSLGMSHTQAMRFVILPQALRVVLPPMGNEFISLLKDTSLVSTVAVADMVRLGRE 232 Query: 181 IVSTTYQPLIIYCELA 196 +T + P+ ++ +A Sbjct: 233 FTATNFNPIEVWSMIA 248 >gi|322390972|ref|ZP_08064478.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 903] gi|321142347|gb|EFX37819.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 903] Length = 520 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 74/230 (32%), Positives = 120/230 (52%), Gaps = 11/230 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTII 54 + ++ D+ PQ L +TL I+ + LIIG I V R + T Sbjct: 280 QMMKILKDNGPQFLRG-TGMTLLISMTGTIAGLIIGLLIGVFRTAPKAKNKFLAGCQTAF 338 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 ++ Y+ IFRGTP++VQ VIFYG I D A I +++N AY+SEI+R Sbjct: 339 GWFLNVYIEIFRGTPMIVQSMVIFYGSAQAFNISLDRTWAAIFIVSINTGAYMSEIVRGG 398 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I+++ GQ++A+ A+G+T QT+R ++LPQ + +EF+ +K TSV + I++ E Sbjct: 399 ILAVDPGQFEAATALGMTHGQTMRKVVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 ++ T I + YQ + +A +Y++LT I IE + TY+ Sbjct: 459 LYFTGNTIATQNYQYFPTFTIIAVIYIVLTFTITRILRYIERRLDSDTYT 508 >gi|291458995|ref|ZP_06598385.1| L-cystine ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291418249|gb|EFE91968.1| L-cystine ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 231 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 69/192 (35%), Positives = 112/192 (58%), Gaps = 4/192 (2%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +S + + A+ +TL + +SFV+SL++ FIAVI +F ++ YV FRGTPL Sbjct: 7 ESCTKAIMRALPITLELTAVSFVLSLLLAVFIAVID-YFKVPVLRQFFALYVSFFRGTPL 65 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIII---SLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 L QLF++++G+P S AI+I LTLN +AY+ E++R +++S+P+GQ +A+ A Sbjct: 66 LPQLFLLYFGIPTFIKPLRSIPAIVICTIGLTLNAAAYMKEVVRGALLSVPEGQREAALA 125 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++ +T+ I+LPQ + L + + I+K +S+A TI + EI A S T+ Sbjct: 126 HGMSETRTMTRIVLPQAARVAIPSLFNNLVDIVKGSSMAFTIGVVEITAAANLRASVTFN 185 Query: 188 PLIIYCELAFVY 199 Y L VY Sbjct: 186 YFEAYMILMLVY 197 >gi|20807014|ref|NP_622185.1| ABC-type amino acid transport system, permease component [Thermoanaerobacter tengcongensis MB4] gi|20515499|gb|AAM23789.1| ABC-type amino acid transport system, permease component [Thermoanaerobacter tengcongensis MB4] Length = 220 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 64/188 (34%), Positives = 115/188 (61%), Gaps = 1/188 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L + +++TL + ++ I +++G FIA++++ S I L+ Y+ + RGTPLLVQL Sbjct: 14 LFISGLIMTLKLTFLAVTIGVLMGLFIALMKMS-SIKPIKLVASSYIEVIRGTPLLVQLL 72 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +I+ GL G+ +F A + +L +N SAY++EIIR+ I ++ GQ +A+ ++G+T Sbjct: 73 LIYNGLMQFGMNIPAFTAGVSALAINSSAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMA 132 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R++I+PQ I L +EFI +LK +++ S I ++ + A I S TY+ Y + Sbjct: 133 MRYVIIPQAIKNILPALGNEFIVMLKESAIVSVIGFADLTRQADIIQSVTYRYFEPYIII 192 Query: 196 AFVYLILT 203 A +Y ++T Sbjct: 193 AAIYFVMT 200 >gi|225620108|ref|YP_002721365.1| ABC-type amino acid transport system, permease [Brachyspira hyodysenteriae WA1] gi|225214927|gb|ACN83661.1| HisM, ABC-type amino acid transport system, permease component [Brachyspira hyodysenteriae WA1] Length = 216 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 68/196 (34%), Positives = 115/196 (58%), Gaps = 5/196 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP- 82 TL + ++ + SL + A ++ F S + I Y WIFRGTPL++QL +YGLP Sbjct: 18 TLSLYFVTAIFSLPLSMLFAALQ-FSSPKFVRYIFDIYAWIFRGTPLILQLIFFYYGLPL 76 Query: 83 --HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 + I F +F + I+ LN+SAY+ EI R+ I SI KGQ++A +A+ L+ +Q + II Sbjct: 77 MTNNMIAFPAFTSAAITFVLNYSAYLMEIFRAGIESIEKGQYEAGFALNLSYRQIMTRII 136 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LPQ + PLS+E I+++K T++ + I ++ A++I++ Y+ L+ + A +YL Sbjct: 137 LPQAVRRVLPPLSNEAINLIKDTALVIVLGIGDLMLHARQILTRDYK-LLPFLIAAIIYL 195 Query: 201 ILTSFCYIIQIKIESS 216 + TS + ++E Sbjct: 196 LFTSILVFVFRQLEKK 211 >gi|331005159|ref|ZP_08328559.1| polar amino acid ABC transporter, inner membrane subunit [gamma proteobacterium IMCC1989] gi|330421039|gb|EGG95305.1| polar amino acid ABC transporter, inner membrane subunit [gamma proteobacterium IMCC1989] Length = 315 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 66/192 (34%), Positives = 119/192 (61%), Gaps = 8/192 (4%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL-IMHFYVWIFRGTPLLVQL 74 L+ +++T+ I+ S + ++IIG + ++R + +I++ + Y+ I RGTPLLVQ+ Sbjct: 111 LITKGMMMTIYISFFSLIFAIIIGLVVGILRT--TKNVIAMNLTTVYIEIIRGTPLLVQI 168 Query: 75 FVIFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 F+ ++ IG V D A I +L++ AYI+EI+RS I SIP+GQ + + ++GL+ Sbjct: 169 FIFYF---FIGTVLDLDRMTAGIAALSIFSGAYIAEIVRSGIQSIPQGQTEGAKSLGLSY 225 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+R +ILPQ I + P+ +FI+++K +S+ S I I ++ + + + S T+ P ++ Sbjct: 226 LQTMRLVILPQAIRKTLPPMVGQFINLVKDSSLVSVIAITDLTKAGREVASATFSPFEVW 285 Query: 193 CELAFVYLILTS 204 +A YL+LT Sbjct: 286 FTIALCYLLLTG 297 >gi|307248651|ref|ZP_07530665.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306854862|gb|EFM87051.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 138 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 55/131 (41%), Positives = 80/131 (61%) Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 D A II +LN AY SE +R++I S+PKGQW+A Y IG+T QT R II PQ I + Sbjct: 4 DPIPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAIRVA 63 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 PLS+ FI + K TS+AS +T+ E+F+ AQ++ + +Y L +Y E +Y ++ Sbjct: 64 VPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVYIEAGLIYWCFCWGLFL 123 Query: 209 IQIKIESSVTQ 219 IQ K+E + Sbjct: 124 IQAKLERRFNR 134 >gi|149181761|ref|ZP_01860252.1| amino acid ABC transproter, permease [Bacillus sp. SG-1] gi|148850502|gb|EDL64661.1| amino acid ABC transproter, permease [Bacillus sp. SG-1] Length = 215 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 122/216 (56%), Gaps = 7/216 (3%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 +E F ID F + +++T + +S I++ IG F A ++I ++ +I Y+ Sbjct: 4 FETFTGTIDVFLK----GMLLTFELTVVSVFIAIFIGLFFAFLKIS-KMKVLEIIADIYI 58 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 ++ RGTPL+VQ+F+ ++GL + I F ++++ L + AYI+EI R +I SI KGQ Sbjct: 59 FVVRGTPLIVQIFIFYFGLTALQI--SGFWSVVLGLAFHNGAYIAEIFRGTIQSIDKGQM 116 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A ++G++ T+R IILPQ + PL ++FI LK +S+AS I + E+F A + Sbjct: 117 EAGRSLGMSNGLTMRRIILPQAFRRALPPLGNQFIIALKDSSLASFIGMYELFSVATTLG 176 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 S + + +A YL+L F +I +E ++ Sbjct: 177 SNNFDYMTYLLIVAVYYLVLVLFFSVIVNFVEKRMS 212 >gi|26987392|ref|NP_742817.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida KT2440] gi|24982048|gb|AAN66281.1|AE016256_8 amino acid ABC transporter, permease protein, putative [Pseudomonas putida KT2440] Length = 273 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 128/218 (58%), Gaps = 10/218 (4%) Query: 6 FNLIIDSFPQL---------LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 F +I++ FP L +TL + S V+S+++GF A+ R+ S ++ Sbjct: 48 FAIILEKFPNLAGFKLGPNGFLQGAALTLFLCLCSMVVSVLLGFAAALARLSNSAVLVG- 106 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + FY FRGTPLL+Q+ +I+ GLP +G+V + A II+L+LN+ AY+SEI R+ I+ Sbjct: 107 VASFYTSFFRGTPLLIQILLIYLGLPQVGLVPGAISAGIIALSLNYGAYLSEIFRAGILG 166 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + +GQ +A+ A+G+ Q HIILPQ + P +++FIS+LK +S+ S + + E+ Sbjct: 167 VARGQREAALALGMRTPQIFCHIILPQAMRVIIPPTANQFISMLKDSSLISVMGVWEVMF 226 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 AQ ++Y+ L + A +Y +L+ ++Q ++E Sbjct: 227 LAQSYGRSSYRYLEMLTTAAVIYWVLSILLELLQARLE 264 >gi|325277060|ref|ZP_08142718.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] gi|324097810|gb|EGB95998.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] Length = 273 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 129/218 (59%), Gaps = 10/218 (4%) Query: 6 FNLIIDSFPQL---------LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 F +I++ FP L +TL + S V+S+++GF A+ R+ S ++ Sbjct: 48 FAIIVEKFPNLAGFKLGPNGFLQGAALTLFLCLCSMVVSVLLGFAAALARLSGSAVLVG- 106 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I FY FRGTPLL+Q+ +I+ GLP +G+V + A II+L+LN+ AY+SEI R+ I+ Sbjct: 107 IASFYTSFFRGTPLLIQILLIYLGLPQVGLVPGAISAGIIALSLNYGAYLSEIFRAGILG 166 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + +GQ +A+ A+G+ QT +I+LPQ + P +++FIS+LK +S+ S + + E+ Sbjct: 167 VARGQREAALALGMRPPQTFCYIVLPQAMRVIIPPTANQFISMLKDSSLISVMGVWEVMF 226 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 AQ ++Y+ L + A +Y +L+ ++Q ++E Sbjct: 227 LAQSYGRSSYRYLEMLTTAAIIYWVLSILLELLQARLE 264 >gi|152994484|ref|YP_001339319.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas sp. MWYL1] gi|150835408|gb|ABR69384.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas sp. MWYL1] Length = 216 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 60/157 (38%), Positives = 97/157 (61%), Gaps = 3/157 (1%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEII 110 + I+ I+ YV +F+GTPLL+Q+F+ F+GL +G ++ A I+SLT SA++ EI Sbjct: 46 NPIMQRIVKIYVELFQGTPLLMQMFLCFFGLSMLGYEISAWSAAILSLTFFTSAFLVEIW 105 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R I ++PKGQW+AS +GL+ QT+R IILPQ I + P + ++K T++AS I Sbjct: 106 RGCIDTLPKGQWEASRCLGLSFLQTLRFIILPQAIRVATAPTVGFSVQVIKGTALASVIG 165 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 E+ + + + T++P I+ +A +Y +L CY Sbjct: 166 FVELTKVGTMLNNATFEPFKIFTLVALIYFVL---CY 199 >gi|225868288|ref|YP_002744236.1| glutamine ABC transporter, glutamine-binding protein/permease [Streptococcus equi subsp. zooepidemicus] gi|225701564|emb|CAW98789.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. zooepidemicus] Length = 721 Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 112/192 (58%), Gaps = 8/192 (4%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI----- 84 ISF I+L+IG ++ + S ++ + + +V + RG PL++ IF+G+P++ Sbjct: 527 ISFAIALVIGIVFGMMAVSPSSSLRT-VSTIFVDVVRGIPLMIVAAFIFWGVPNLIESMT 585 Query: 85 --GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + FVA I+L+LN AYI+EI+R I ++P GQ +AS ++GL+ T+R IILP Sbjct: 586 GHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYHTTMRRIILP 645 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q I ++F+ LK T++ S I + E+FQT + I++ YQ +Y LA +YLI+ Sbjct: 646 QAIKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAVIYLIM 705 Query: 203 TSFCYIIQIKIE 214 + + ++E Sbjct: 706 ITLLTRLAKRLE 717 >gi|163856730|ref|YP_001631028.1| putative amino acid ABC transporter, permease protein [Bordetella petrii DSM 12804] gi|163260458|emb|CAP42760.1| putative amino acid ABC transporter, permease protein [Bordetella petrii] Length = 217 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 107/166 (64%), Gaps = 4/166 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + ++F +++ +G +A+ R+ ++S +++ Y+W+ RGTPL++Q+ I++ LP Sbjct: 18 TLTLFFVTFALAVPLGLLLALARVSHW-RLLSQLVNGYIWLMRGTPLMLQMLFIYFALPF 76 Query: 84 I---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 + G+ F A I++ LN++AY +EI R+ I+S+ +GQ++ S +G++ QT+R I+ Sbjct: 77 VPVVGVRLPDFPAAIVAFALNYAAYFAEIFRAGILSVDRGQYEGSKVLGMSYLQTMRRIV 136 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 LPQ + P+S+E I+++K TS+ + + +I +TA+ IV + Sbjct: 137 LPQMVQRVLPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDF 182 >gi|90413902|ref|ZP_01221888.1| hypothetical amino acid ABC transporter, permease protein [Photobacterium profundum 3TCK] gi|90325086|gb|EAS41596.1| hypothetical amino acid ABC transporter, permease protein [Photobacterium profundum 3TCK] Length = 315 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 129/206 (62%), Gaps = 10/206 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF-YVWIFRGTPLLVQLF 75 L + VTL I+ IS ++IIG ++RI S+ ++ + F YV I RGTPLLVQ+F Sbjct: 113 LIVGLWVTLKISVISLFFAVIIGLVAGLMRI--SNNPVTKNLSFLYVEIIRGTPLLVQIF 170 Query: 76 VIFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 ++++ +G +FD F A +++L++ AYI+EIIRS I SIP GQ +A+ ++G+ Sbjct: 171 IVYF---FLGTIFDLERFTAGVVALSVFTGAYIAEIIRSGIQSIPPGQMEAARSLGMNYP 227 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + + ++ILPQ + P++ + I+++K +S+ S I+I ++ + + ++S ++ ++ Sbjct: 228 KAMAYVILPQAFKRTLPPMAGQLITLIKDSSLVSVISITDLTKAGREVISGSFATFEVWF 287 Query: 194 ELAFVYLILT-SFCYIIQIKIESSVT 218 +A +YL+LT S +++Q +IE + Sbjct: 288 VVAGLYLLLTISLSWVVQ-RIEKRLA 312 >gi|315653364|ref|ZP_07906286.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners ATCC 55195] gi|315489289|gb|EFU78929.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners ATCC 55195] Length = 219 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 72/202 (35%), Positives = 122/202 (60%), Gaps = 10/202 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W NL + L ++VT+ I+ +S ++S I+G F+ ++R + +IS I+ F V Sbjct: 8 YSWINL------RFLLQGLMVTVYISIVSIILSFILGLFLGIVR-YLKIKVISHIVGFIV 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP +GIV + A II+L + A ++EI+RS I ++ KGQ Sbjct: 61 DILRNLPLLLIIFFAYFGLPQLGIVTNVTCAAIIALVVFEGAMLAEIVRSGIGAVNKGQL 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + G+T Q + H+++PQ + + S+F+S++K TS+A+ I +PE+ AQ I Sbjct: 121 EGALSNGMTYAQAMYHVVVPQALHFMIPAILSQFVSLIKDTSLATIIVLPELLYHAQIIY 180 Query: 183 S--TTYQPLIIYCELAFVYLIL 202 S TTY L +Y +A +Y I+ Sbjct: 181 SQNTTYL-LPMYAIVALMYFII 201 >gi|229042504|ref|ZP_04190249.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH676] gi|228726857|gb|EEL78069.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH676] Length = 214 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 102/163 (62%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A I+ V+S IIG I ++R + ++S ++ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVIGILR-YTKIPVVSQVLGVIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ Q Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNVQ 176 >gi|126737936|ref|ZP_01753666.1| ABC-type amino acid transport system, permease component [Roseobacter sp. SK209-2-6] gi|126721329|gb|EBA18033.1| ABC-type amino acid transport system, permease component [Roseobacter sp. SK209-2-6] Length = 221 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 113/204 (55%), Gaps = 8/204 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYV 62 F+ +I +P+LL + + F ++ I+G IA++ S+ +I Y+ Sbjct: 4 FDFVIQYWPRLLAGS-----GMTVAQFFLAAILGVTIALMMGLMKLSSNKLIRGSAVTYI 58 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 IFRGT LLVQL+ IF+ LP G+ D F A +++ +N AY +E++R I+S+PKGQW Sbjct: 59 EIFRGTSLLVQLYWIFFVLPLFGVTIDKFTAGYVAVGMNIGAYGAELVRGGILSVPKGQW 118 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ AI ++ Q ++ IILPQ + P + I +LK T++ S I++ ++ ++I Sbjct: 119 EAALAINMSPAQRMQRIILPQALVNMLPPWGNLMIELLKGTALVSLISVADLMFETKQIN 178 Query: 183 STTYQPLIIYCELAFVYLILTSFC 206 S+T+ + +Y IL F Sbjct: 179 SSTFLSAQAFGAALVIYYILARFM 202 >gi|18310307|ref|NP_562241.1| amino acid ABC transporter [Clostridium perfringens str. 13] gi|110800931|ref|YP_695975.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium perfringens ATCC 13124] gi|18144987|dbj|BAB81031.1| probable amino acid ABC transporter [Clostridium perfringens str. 13] gi|110675578|gb|ABG84565.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens ATCC 13124] Length = 213 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 64/173 (36%), Positives = 108/173 (62%), Gaps = 2/173 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N II P ++ + TL + ++ ++S+ +G +A++R+ + I++ I YV + R Sbjct: 2 NYIITLMPSII-EGLKNTLGVFILTLLLSIPLGIIVAILRLS-NIKIVNFISSLYVLVMR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLL+QL IF+GLP IG+ D F A II+ TLN++AY EI RS I I +GQ++AS Sbjct: 60 GTPLLLQLIFIFFGLPIIGVSIDRFPAAIIAFTLNYAAYFGEIFRSGIKDIDRGQFEASK 119 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +GL++ T + IILPQ+ + +++E I+++K TS+ + I E+ + + Sbjct: 120 ILGLSKWFTFKKIILPQSFKKTLPSIANEVITLVKDTSLVYVVGIGELLRAGK 172 >gi|81428468|ref|YP_395468.1| amino acid ABC transporter transmembrane protein [Lactobacillus sakei subsp. sakei 23K] gi|78610110|emb|CAI55159.1| Putative amino acid ABC transporter, membrane-spanning subunit [Lactobacillus sakei subsp. sakei 23K] Length = 213 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 1/159 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +++ YVW+ RGTPLL+QL +FYGLP IGIVF+ F A +I+ LN++AY +EI R + Sbjct: 50 LLNLYVWLMRGTPLLLQLIFVFYGLPVIGIVFNRFDAALIAFILNYAAYFAEIFRGGFQA 109 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + GQ +A+ +GLT QTI II+PQT+ + +E I+++K +S+ I I ++ + Sbjct: 110 VDDGQIEAASVLGLTYPQTILKIIVPQTVKIVLPSVGNEVINLIKDSSLVYVIGIGDLLR 169 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 A + S L+ + +YL LT+ C + ++E Sbjct: 170 -AGNVASARDVNLVPLLLVGVIYLALTAICTWLLGRLEQ 207 >gi|288962581|ref|YP_003452876.1| polar amino acid transport system permease protein [Azospirillum sp. B510] gi|288914847|dbj|BAI76332.1| polar amino acid transport system permease protein [Azospirillum sp. B510] Length = 216 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 53/157 (33%), Positives = 96/157 (61%), Gaps = 3/157 (1%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ +F+GTPLL+QLF++F+ LP +GI ++ + + LTL +AY++EI R + ++P Sbjct: 54 RLFIELFQGTPLLMQLFIVFFALPLVGIETSAWTSAAVGLTLFTAAYLAEIWRGCVEAVP 113 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQW+AS ++ LT + +RH+ILPQ + + P + ++K T+V S I E+ + Sbjct: 114 KGQWEASASLALTFGEQMRHVILPQALRIAVPPTVGFSVQVVKGTAVTSIIGFVEVTKAG 173 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 I + T+QP ++Y + +Y L CY + + ++ Sbjct: 174 TMITNATFQPFLVYGLVGLIYFAL---CYPLSLSAKA 207 >gi|319777993|ref|YP_004134423.1| polar amino acid abc transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171712|gb|ADV15249.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 324 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 61/158 (38%), Positives = 98/158 (62%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I FY FRG PLL+Q+++I+ GLP +G V + A I++L+L + AY++EI RS I S Sbjct: 158 IASFYTSFFRGLPLLMQVYLIYLGLPQLGFVVGAVPAGILALSLCYGAYMTEIFRSGIQS 217 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQW+AS ++G T+R IILPQ + P ++FIS+LK +S+ S I + E+ Sbjct: 218 IDRGQWEASRSMGFGFSLTMRRIILPQALPVIIPPTGNQFISMLKDSSLVSVIGVWELMF 277 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 A+ + T+Q + + + +Y +L+ +IQ +IE Sbjct: 278 LARTLGQKTFQHMEMLISASLIYWMLSICLELIQSRIE 315 >gi|307131246|ref|YP_003883262.1| ABC transporter permease [Dickeya dadantii 3937] gi|306528775|gb|ADM98705.1| ABC transporter permease protein [Dickeya dadantii 3937] Length = 234 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 116/204 (56%), Gaps = 4/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M+Y+W F+ + +P LL + T+ I S +I +++G +A +++ S ++ L H Sbjct: 12 MRYQWDFSALPHWWP-LLLDGLWGTVRIGFTSILIGMLVGALLAAMKLS-STRLLRLPAH 69 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ +R TP +V F I+Y LP + + F A + +L+ +A+ +E+ R I+SI Sbjct: 70 LFIGFYRNTPAIVHFFWIYYALPVVSPLTLSPFAAAVTALSAQSAAFYAEVYRGGILSIA 129 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW+ + A+G++R +R +ILPQ + PL ++KSTS+AS++ E+ A Sbjct: 130 EGQWEGAKALGMSRPLALRRVILPQALRRMIPPLIERSFELIKSTSLASSLAYGELLYQA 189 Query: 179 QRIVSTTYQPLIIYCELAFVYLIL 202 +I S +++PL +Y A +Y L Sbjct: 190 MQINSQSFRPLEVYSLAALLYFTL 213 >gi|121608572|ref|YP_996379.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121553212|gb|ABM57361.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 260 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 107/192 (55%), Gaps = 3/192 (1%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I S Q A +TL + +S + L++G A+ R ++ + FY+W+ RGTP Sbjct: 45 IGSNAQAFSAGARITLWLTLVSGSLGLVLGTGTALARTS-RWMVLRWVAGFYIWVIRGTP 103 Query: 70 LLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 LLVQ+ +++ LP + G+ F A +++L LN AY +E +R+ ++++P+GQ +A+ A Sbjct: 104 LLVQILFVYFALPILVPGLNLPDFAAAVLALGLNVGAYNAEAVRAGLLAVPRGQTEAAKA 163 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL R I ++ PQ + PL + F+++LK +S+A I + E+ RI S T+Q Sbjct: 164 LGLGRLHVIADVVFPQAFRIALPPLVNNFVALLKDSSLAYAIGVVELTNVGYRIQSVTFQ 223 Query: 188 PLIIYCELAFVY 199 + +A Y Sbjct: 224 SVATLSTVAVTY 235 >gi|260461009|ref|ZP_05809258.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259033043|gb|EEW34305.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 230 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 61/179 (34%), Positives = 108/179 (60%), Gaps = 1/179 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ +A I+F +IG +A IR+ + + L Y+ F GTP+L+QLF+ +YG Sbjct: 21 TILLALIAFAGGGLIGLVVAAIRVAPARPLRWLAAG-YIQFFMGTPILIQLFMAYYGSSF 79 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G D +VA ++ +LN A+ EI R +I +IPKGQW+A+ A+G +T+R +I+PQ Sbjct: 80 LGYRPDPWVAAAVTFSLNGGAFFGEIFRGAIEAIPKGQWEAATALGFRFVRTLRLVIIPQ 139 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + P + I+K+TS+AS I + E+ + A ++ + T+QP++++ ++ +Y L Sbjct: 140 AVRLMLPPTVGFMVQIVKTTSIASLIGLTELARAATQVNTVTFQPVMVFGTVSIIYFAL 198 >gi|309800525|ref|ZP_07694677.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus infantis SK1302] gi|308115873|gb|EFO53397.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus infantis SK1302] Length = 313 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 126/219 (57%), Gaps = 9/219 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + L+ +++ QLL + + +TL +A ISF I+++IG + + ++ LI +V + Sbjct: 96 WGLLKNNYKQLL-SGLGITLSLALISFAIAIVIGIIFGMFSVSPYKSL-RLISEIFVDVI 153 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RG PL++ IF+G+P+ + FVA I+L+LN +AYI+EI+R I ++P Sbjct: 154 RGIPLMILAAFIFWGVPNFIESLTGQQSPINDFVAGTIALSLNSAAYIAEIVRGGIKAVP 213 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS ++G++ +T+R I+LPQ ++F+ LK T++ S I + E+FQT Sbjct: 214 IGQMEASRSLGISYSKTMRKIVLPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTG 273 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + I++ YQ +Y LA YL++ + + ++E + Sbjct: 274 KIIIARNYQSFKMYAILAVFYLVIITLLTRLAKRLEKRI 312 >gi|187924720|ref|YP_001896362.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187715914|gb|ACD17138.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 218 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 65/193 (33%), Positives = 115/193 (59%), Gaps = 4/193 (2%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVW 63 +F ++ P LL A VVT+ I SFV+S ++G +A++R+ SD ++S ++ Sbjct: 2 FFQNAVEFLPILLKGA-VVTIEITFCSFVLSTVLGLLLALMRV--SDNRVVSNAAATFIN 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RG P++VQLF I++ LP +G+ +F A I L + +S Y +E R+ I +I GQ + Sbjct: 59 VIRGLPIIVQLFYIYFVLPDLGVQLSAFQAGFIGLGIAYSVYQAENFRAGIQAIDHGQIE 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+ +R ++LPQ + P + + +LK +S+ASTIT+ E+ + Q I S Sbjct: 119 AAQSIGMRGAMIMRRVVLPQAFRIALPPYGNTLVMMLKDSSLASTITVAEMTRAGQLIAS 178 Query: 184 TTYQPLIIYCELA 196 +T+Q + ++ +A Sbjct: 179 STFQNMTVFTLVA 191 >gi|309389820|gb|ADO77700.1| amino acid ABC transporter membrane protein, PAAT family [Halanaerobium praevalens DSM 2228] Length = 212 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 59/162 (36%), Positives = 99/162 (61%), Gaps = 5/162 (3%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ FY W+FRGTPLL+QLF +YGLP +GI D F A ++ N+ AY +EI R I S Sbjct: 50 VLSFYTWVFRGTPLLLQLFFAYYGLPVLGITLDPFPAAALTFIFNYGAYFTEIFRGGIES 109 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ++A+ +G+ +QT+ II+PQTI S+E I+++K +++ + I + ++ + Sbjct: 110 IGQGQYEAAKVLGMNYRQTMSRIIIPQTIKRVLPATSNEAINLVKDSALVAVIGLGDLLR 169 Query: 177 TAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIESS 216 A+ V+ + P II A YL+++S + K+E+ Sbjct: 170 AAKVSVTRDFSIIPFII---AAVFYLLISSVIVTVFRKLEAK 208 >gi|317049370|ref|YP_004117018.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316950987|gb|ADU70462.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 221 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 125/215 (58%), Gaps = 2/215 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + I+ S P L +V TL + ++ + SL+ G +A + + S + I++ Y + Sbjct: 3 WQAIMTSLPSL-GDGLVATLQLCAVAALCSLLWGALMAWMLMRASPFWLR-ILNLYSGLT 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 PLLV ++++++ LP I S V +++LTL ++ YI+++IR++I ++PKGQW+A Sbjct: 61 LALPLLVVIYLLYFVLPEYDITLSSPVVGVLALTLYYAPYIAQVIRAAIGALPKGQWEAC 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GL+R + +R ++LPQT+ PL I ++K +++ S +++ E A++ +S T Sbjct: 121 RVLGLSRSEQLRDVVLPQTLPQMLSPLVGLTIGLIKDSALLSIVSVQEFMYAAKQAISAT 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y PL IY +A Y +L S + +ES +T++ Sbjct: 181 YAPLEIYLTVALCYWLLNSVIDWLARCLESLMTRY 215 >gi|240122516|ref|ZP_04735472.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae PID332] gi|268681105|ref|ZP_06147967.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae PID332] gi|268621389|gb|EEZ53789.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae PID332] Length = 219 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 63/184 (34%), Positives = 108/184 (58%), Gaps = 12/184 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-----IRIFFSDTIISLIMHFYVW 63 +ID+ P+ AA +TL ++ V+SL+ G +AV IR F++ + Y+ Sbjct: 6 LIDAVPKFADAA-KLTLELSVYGVVLSLLFGLPVAVVTAYRIRPFYA------LARAYIE 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + R TPLL+QLF ++YGLP +GI +D F +I+L ++Y++E +R+ I+++PKGQ Sbjct: 59 LSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVIALVFLGASYMAEAVRAGILAVPKGQVG 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A AIGL+R Q R++ LPQ + + + + ++K TSV ST+ I E+ + ++ Sbjct: 119 AGKAIGLSRFQVFRYVELPQVWAVAVPAIGANILFLMKETSVVSTVGIAELLFVTKDVIG 178 Query: 184 TTYQ 187 Y+ Sbjct: 179 MDYK 182 >gi|213965269|ref|ZP_03393466.1| ABC-type amino acid transport system, permease component [Corynebacterium amycolatum SK46] gi|213952121|gb|EEB63506.1| ABC-type amino acid transport system, permease component [Corynebacterium amycolatum SK46] Length = 326 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 127/222 (57%), Gaps = 27/222 (12%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + AA T+ + ++ +I ++ G +AV+R+ + ++S + FY+W+FRGTP+ V Sbjct: 66 FDTRIAAAAGWTIALTVLAMIIGIVGGAIVAVLRMS-ENPVLSTVSWFYLWVFRGTPVYV 124 Query: 73 QLFVIFYGLPHIGIVF-----------------DSFVAIIISLTLNFSAYISEIIRSSII 115 QL +F+GL +G ++ ++FV + L LN SAY++EI+R+ I Sbjct: 125 QL--VFWGL--LGTIYSTINLGVTEVDLSTVLSNTFVLAFVGLGLNESAYMAEIVRAGIQ 180 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP--- 172 ++P+GQ +AS A+G++ QT+R ILPQ + P +EFIS+LK+TS+ I +P Sbjct: 181 AVPEGQTEASKALGMSWWQTVRRTILPQAMRIIIPPTGNEFISLLKTTSL--VIAVPFSL 238 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 E++ + I + + P+ + A YL++TS + Q +E Sbjct: 239 ELYGRSTDIANALFLPVPMLLVAATWYLVITSILMVGQFYLE 280 >gi|21910156|ref|NP_664424.1| putative ABC transporter (permease) [Streptococcus pyogenes MGAS315] gi|28896145|ref|NP_802495.1| ABC transporter (permease) [Streptococcus pyogenes SSI-1] gi|71903352|ref|YP_280155.1| cystine transport system permease protein [Streptococcus pyogenes MGAS6180] gi|21904349|gb|AAM79227.1| putative ABC transporter (permease) [Streptococcus pyogenes MGAS315] gi|28811395|dbj|BAC64328.1| putative ABC transporter (permease) [Streptococcus pyogenes SSI-1] gi|71802447|gb|AAX71800.1| cystine transport system permease protein [Streptococcus pyogenes MGAS6180] Length = 216 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 93/143 (65%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ I RG P++V LFV+++GLP+ G+ + + + ++ +AYISE+ RSSI +I KG Sbjct: 57 YISIMRGVPMIVVLFVLYFGLPYYGLELPALLCAYLGFSMVSAAYISEVFRSSIEAIDKG 116 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A+GL ++ IILPQ + PL + I ++KS+S+A+ IT+P+IFQ A+ Sbjct: 117 QWEAAKALGLPYALMVKKIILPQAFRIAVPPLGNVIIDMVKSSSLAAMITVPDIFQNAKI 176 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I + + +Y +AF+Y I+ Sbjct: 177 IGGREWDYMSMYILVAFIYWIIA 199 >gi|319794877|ref|YP_004156517.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315597340|gb|ADU38406.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 217 Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 53/142 (37%), Positives = 92/142 (64%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV +F+GTPLL+QLF+ ++G+ GI ++ A ++LTL SA+++EI R + SIPKG Sbjct: 56 YVQLFQGTPLLMQLFLAYFGIALFGIDVSAWTAASVALTLYTSAFLTEIWRGCVASIPKG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+AS ++ L+ + +RH+ILPQ + + P + ++K T++AS I E+ + Sbjct: 116 QWEASGSLALSFGEQMRHVILPQAVKIAIAPTVGFLVQVIKGTALASVIGFVELTKAGSM 175 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 I + T+QP +++ +A +Y +L Sbjct: 176 ISNATFQPFVVFSCVALLYFVL 197 >gi|300858345|ref|YP_003783328.1| hypothetical protein cpfrc_00927 [Corynebacterium pseudotuberculosis FRC41] gi|300685799|gb|ADK28721.1| putative membrane protein [Corynebacterium pseudotuberculosis FRC41] gi|302206063|gb|ADL10405.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Corynebacterium pseudotuberculosis C231] gi|302330613|gb|ADL20807.1| Putative ABC transport system membrane protein [Corynebacterium pseudotuberculosis 1002] gi|308276299|gb|ADO26198.1| Putative ABC transport system membrane protein [Corynebacterium pseudotuberculosis I19] Length = 318 Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 123/212 (58%), Gaps = 27/212 (12%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I +S ++ +++G +AV+R+ + ++ ++ FY+WIFRGTP+ VQL +F+GL Sbjct: 64 TLAITILSMILGVVLGCAVAVMRMS-PNPVLRIVSWFYLWIFRGTPVYVQL--VFWGL-- 118 Query: 84 IGIVFDS-----------------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 +G ++ + F+ ++ L LN +AY++EI+RS + ++P+GQ +AS Sbjct: 119 LGSLYQTINLGFTEISLEKALSNMFLLAVLGLGLNEAAYMAEIVRSGLQAVPEGQTEASK 178 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP---EIFQTAQRIVS 183 A+G++ TIR +LPQ + P +EFIS+LK+TS+ + IP E++ A I + Sbjct: 179 ALGMSWWMTIRRTVLPQAMRIIVPPTGNEFISLLKTTSL--VVAIPYTAELYGRATDIAA 236 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + P+ + A YL++TS I Q +E Sbjct: 237 ALFDPVPLLLVAATWYLVITSLLMIAQSYLEK 268 >gi|296272602|ref|YP_003655233.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter nitrofigilis DSM 7299] gi|296096776|gb|ADG92726.1| polar amino acid ABC transporter, inner membrane subunit [Arcobacter nitrofigilis DSM 7299] Length = 216 Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 66/198 (33%), Positives = 120/198 (60%), Gaps = 5/198 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 +D F LL A TL ++ I+F+ I+ + ++R+ ++ +S+++ YV IF+GTP Sbjct: 7 LDIFHNLLLAT-RWTLLLSLIAFIGGGIVAGILILLRMT-NNRFLSILIKIYVEIFQGTP 64 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+QL++ F+GL IGI + + A ++LTL SA++ EI + S+PKGQW+A+ +G Sbjct: 65 LLMQLYLAFFGLSLIGIDINEWTAASLALTLFTSAFLCEIWSGCLNSVPKGQWEAAKTMG 124 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L Q++ H+I+PQTI + P + ++K T++AS I E+ + + + T++P Sbjct: 125 LNYYQSMIHVIIPQTIRVATAPTIGFSVQVVKGTALASIIGFIELTKAGTMLNNATFEPF 184 Query: 190 IIYCELAFVYLILTSFCY 207 ++ +A +Y ++ CY Sbjct: 185 KVFTMVAIIYFVI---CY 199 >gi|148545936|ref|YP_001266038.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida F1] gi|148509994|gb|ABQ76854.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida F1] Length = 273 Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 128/218 (58%), Gaps = 10/218 (4%) Query: 6 FNLIIDSFPQL---------LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 F +I++ FP L +TL + S V+S+++GF A+ R+ S ++ Sbjct: 48 FAIILEKFPNLAGFKLGPNGFLQGAALTLFLCLCSMVVSVLLGFAAALARLSNSAVLVG- 106 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + FY FRGTPLL+Q+ +I+ GLP +G+V + A II+L+LN+ AY+SEI R+ I+ Sbjct: 107 VASFYTSFFRGTPLLIQILLIYLGLPQVGLVPGAISAGIIALSLNYGAYLSEIFRAGILG 166 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + +GQ +A+ A+G+ Q HIILPQ + P +++FIS+LK +S+ S + + E+ Sbjct: 167 VARGQREAALALGMRTPQIFCHIILPQAMRVIIPPTANQFISMLKDSSLISVMGVWEVMF 226 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 AQ ++Y+ L + A +Y +L+ ++Q ++E Sbjct: 227 LAQSYGRSSYRYLEMLTTAAVIYWVLSILLELLQARLE 264 >gi|322388196|ref|ZP_08061800.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus infantis ATCC 700779] gi|321140868|gb|EFX36369.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus infantis ATCC 700779] Length = 227 Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 119/209 (56%), Gaps = 17/209 (8%) Query: 28 ACISFVISLII---GFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIFYGL 81 A ++ +IS+++ G + V+ F + I + F Y+W+FRGTP++VQ+ + F L Sbjct: 17 AVVTIIISILVVFLGTILGVLLAFAQRSKIKPLAWFANLYIWVFRGTPMMVQIMIAF-AL 75 Query: 82 PHI-------GIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 HI GI+ + I+ +++N AY+SE +R+ I ++PKGQ +A+Y++G+ Sbjct: 76 MHISAPTIQIGILDVDLTRLIPGILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIR 135 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 K +R++ILPQ I L +EFI+I+K +S+ S I + E++ A + +TTY PL Sbjct: 136 PKNAMRYVILPQAIKNILPSLGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTP 195 Query: 192 YCELAFVYLILTSFCYIIQIKIESSVTQH 220 AF YLI+TS + E+ + Q Sbjct: 196 LLFAAFYYLIMTSILTLALKAFENRMGQG 224 >gi|306825135|ref|ZP_07458477.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein/permease protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432571|gb|EFM35545.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein/permease protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 721 Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 121/205 (59%), Gaps = 10/205 (4%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+ +++ QLL + + +TL +A ISF I+++IG + + ++ LI +V + Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSL-RLISEIFVDV 560 Query: 65 FRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSIISI 117 RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I ++ Sbjct: 561 IRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQAV 620 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+FQT Sbjct: 621 PVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQT 680 Query: 178 AQRIVSTTYQPLIIYCELAFVYLIL 202 + I++ YQ +Y LA YLI+ Sbjct: 681 GKIIIARNYQSFKMYAILAIFYLII 705 >gi|224541592|ref|ZP_03682131.1| hypothetical protein CATMIT_00763 [Catenibacterium mitsuokai DSM 15897] gi|224525504|gb|EEF94609.1| hypothetical protein CATMIT_00763 [Catenibacterium mitsuokai DSM 15897] Length = 232 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 118/201 (58%), Gaps = 13/201 (6%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII----SLIMHFYVWIFRGT 68 F AIV+T+ ++ IS + + IIG + ++ S ++I I + Y++I RGT Sbjct: 11 FASRFNQAIVITIELSIISLIAATIIGIIVGLVNTLKSKSVIMKILKAIANLYIYIIRGT 70 Query: 69 PLLVQLFVIFYGLPHI----GI----VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 P+LVQ+ +I++GL + G + +F A ++L+LN AY++EI+R I ++ KG Sbjct: 71 PMLVQILIIYFGLGQMLRPTGFRWLNIGGTFTAGTVALSLNAGAYMAEIVRGGIEAVDKG 130 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++GLT +T++ I+LPQ + T + ++FI +K TS+ S I + E+ + Sbjct: 131 QIEAARSLGLTYGKTMKKIVLPQALRTMLPSIINQFIISIKDTSLLSVIGLTELTNVGKT 190 Query: 181 IVST-TYQPLIIYCELAFVYL 200 I +T + ++IYC +A YL Sbjct: 191 IAATQSAHMMVIYCFMACYYL 211 >gi|329116355|ref|ZP_08245072.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] gi|326906760|gb|EGE53674.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] Length = 229 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 63/177 (35%), Positives = 105/177 (59%), Gaps = 14/177 (7%) Query: 60 FYVWIFRGTPLLVQLFVIF------------YGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 FYVWIFRGTP++VQ+ + F +G+ + + F + II ++LN AYIS Sbjct: 55 FYVWIFRGTPMVVQIMIAFAWMHFNQMPIIDFGV--LNLDFSRLLPGIIIISLNSGAYIS 112 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 EI+R+ I ++P GQ +A+Y++G+ K +R +ILPQ L +EFI+I+K +++ Sbjct: 113 EIVRAGIEAVPAGQLEAAYSLGIRPKNAMRFVILPQAFKNILPALGNEFITIIKDSALLQ 172 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 TI + E++ AQ +V++TYQP+ AF YL++T+ + +E + Q S+ Sbjct: 173 TIGVMELWNGAQSVVTSTYQPITPLLFGAFYYLMVTTVMSQLLHLLEKKMGQGVKSL 229 >gi|150403150|ref|YP_001330444.1| polar amino acid ABC transporter inner membrane subunit [Methanococcus maripaludis C7] gi|150034180|gb|ABR66293.1| polar amino acid ABC transporter, inner membrane subunit [Methanococcus maripaludis C7] Length = 226 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 72/198 (36%), Positives = 116/198 (58%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 L I PQL+ +I+ T+ I S +I L +G + + RI + + + FY+ Sbjct: 11 LELFIKIIPQLIDGSIL-TIKITVFSIIIGLFLGTILGMGRISY-NILYRYFSSFYIEFV 68 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQ+ +I++GLP GI ++ A I++L LN AY+ EII++ I+S+ GQ +A+ Sbjct: 69 RGTPLLVQIMIIYFGLPSFGINLSAYTAGILALGLNSGAYVGEIIKAGILSVHVGQMEAA 128 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ Q +R+IILPQ + +EFI +LK +S+ S I I E+ + ++I S+T Sbjct: 129 RSLGMNYAQAMRYIILPQAFRNVLPAIGNEFILLLKDSSLLSVIAIVELTRVGKQIYSST 188 Query: 186 YQPLIIYCELAFVYLILT 203 Y +A YLI+T Sbjct: 189 YNAWTPLLGVALFYLIMT 206 >gi|195978272|ref|YP_002123516.1| probable amino-acid ABC transporter permease protein [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974977|gb|ACG62503.1| probable amino-acid ABC transporter permease protein [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 217 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 94/143 (65%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV I RG P++V LFV+++GLP+ G+ + + + +L +AYISE+ R+SI +I +G Sbjct: 57 YVSIMRGVPMIVVLFVLYFGLPYYGLELSALLCAYLGFSLVSAAYISEVFRASIDAIDQG 116 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A+GL ++H+ILPQ + PL + I ++KS+S+A+ IT+P+IFQ A+ Sbjct: 117 QWEAARALGLPYVSIVKHVILPQAFRIAIPPLGNVVIDMVKSSSLAAMITVPDIFQKAKI 176 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I + + +Y +AF+Y ++ Sbjct: 177 IGGREWDYMSMYILVAFIYWVIA 199 >gi|312963774|ref|ZP_07778245.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] gi|311281809|gb|EFQ60419.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] Length = 216 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 108/184 (58%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ ++FV +IG + +RI + Y+ +F+GTPLL+QLF++F+G+ Sbjct: 20 TLLLSVVAFVGGGLIGLLVMTMRIS-RKAFARNVARTYIELFQGTPLLMQLFLVFFGVAL 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ ++A I+LTL SAY++EI R + SI GQW+AS ++ L + +R++ILPQ Sbjct: 79 LGVDISPWLAAAIALTLFTSAYLAEIWRGCVDSIAHGQWEASASLALNPLEQLRYVILPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T+V S I E+ +T + + T++P ++Y +A Y +L Sbjct: 139 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGGMLANATFEPFMVYGLVALGYFLL- 197 Query: 204 SFCY 207 CY Sbjct: 198 --CY 199 >gi|307299193|ref|ZP_07578994.1| polar amino acid ABC transporter, inner membrane subunit [Thermotogales bacterium mesG1.Ag.4.2] gi|306914989|gb|EFN45375.1| polar amino acid ABC transporter, inner membrane subunit [Thermotogales bacterium mesG1.Ag.4.2] Length = 215 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 112/190 (58%), Gaps = 2/190 (1%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P LL + + VTL I ++ + L++ I+ +++ + I +LI Y I R P LV Sbjct: 2 PALL-SGMWVTLQITFLTLGLGLVLALPISFGQVYGNKWIKALIAG-YEKILRSIPELVI 59 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LF+IFYG P IGI F F A+II L SAY S+I R +I S+ Q A+ ++G+T Sbjct: 60 LFLIFYGFPKIGIRFSPFAAVIIGLGFRSSAYQSQIFRGAINSVSSAQMRAARSLGMTNL 119 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + +I+LPQ I + P ++EF +LK +S+A + + E+ + I++T Y+P++IY Sbjct: 120 KGFINIVLPQAIRIALPPWTNEFTIVLKDSSLAYALGVTELLRQGGYIIATKYEPMLIYL 179 Query: 194 ELAFVYLILT 203 +A +Y I+T Sbjct: 180 TVAVMYFIVT 189 >gi|227888781|ref|ZP_04006586.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] gi|227850618|gb|EEJ60704.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] Length = 224 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 115/201 (57%), Gaps = 3/201 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E N I P L A + T+ I + V+S+ +G +A + ++ I+ FYVW Sbjct: 10 EMLNYIFSILPSLFSGAWL-TIEIFFWTTVVSIPLGLLVA-FGLHSKLKLVKAILKFYVW 67 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I RGTPLL+QL IFYGLP +GIVF + A +++ +N++AY +EI R + ++P GQ++ Sbjct: 68 IIRGTPLLLQLIFIFYGLPTVGIVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPVGQFE 127 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +GL+R QTI I+ PQ + + +E I+++K +S+ I + ++ + A + + Sbjct: 128 AAQVLGLSRWQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYVIGLGDLLR-AGNVAT 186 Query: 184 TTYQPLIIYCELAFVYLILTS 204 L+ + VYL +T+ Sbjct: 187 ARDVSLVPLVLVGCVYLAMTA 207 >gi|218885964|ref|YP_002435285.1| polar amino acid ABC transporter inner membrane protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756918|gb|ACL07817.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 263 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 2/191 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L I VT + +S + S+ IG + R+ + +I+L+ YV + RG PLLVQL Sbjct: 57 QFLPDGIAVTFKVTVLSILCSIPIGLITGLGRLS-RNRLINLVASTYVEVVRGIPLLVQL 115 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F I+Y L V D +A II+L++ + AY+ E+ R+ I SI KGQ +A+ ++G R + Sbjct: 116 FYIYYALGRFLKVPD-LLAAIIALSVCYGAYMGEVFRAGIDSISKGQTEAARSLGFNRAE 174 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 T+ +ILPQ T P+ +EFI++LK TS+ S I + +I + + S ++ Y Sbjct: 175 TMFMVILPQAWRTILPPVGNEFIAMLKDTSLVSIIAVADILRRGREFASESFLYFETYTM 234 Query: 195 LAFVYLILTSF 205 +A +YL++T F Sbjct: 235 VALIYLLITLF 245 >gi|323529859|ref|YP_004232011.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323386861|gb|ADX58951.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 220 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 68/202 (33%), Positives = 111/202 (54%), Gaps = 11/202 (5%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q + A + TL I ++IGF IAV+++F + L + FY+ +FRGTP LVQL Sbjct: 14 QPIAAGLATTLGTWAAGVAIGMLIGFVIAVLQLFCGRWVRGL-LRFYIELFRGTPFLVQL 72 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F+++YG P +G+ + A ++ L + SAY +E RS + S+P G +A+ +GLTR Q Sbjct: 73 FLLYYGGPSVGLTLEPMTAGVLGLGMYGSAYFAEAFRSGLQSVPPGHLEAASCLGLTRTQ 132 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + I +PQ + L++ I + K T+V S +T+PE+ I S T+ Sbjct: 133 AVLRIQMPQMLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATF-------- 184 Query: 195 LAFVY-LILTSFCYIIQIKIES 215 AFV L++ CY+ +++ S Sbjct: 185 -AFVETLLMLCVCYLALVELTS 205 >gi|225076169|ref|ZP_03719368.1| hypothetical protein NEIFLAOT_01201 [Neisseria flavescens NRL30031/H210] gi|224952512|gb|EEG33721.1| hypothetical protein NEIFLAOT_01201 [Neisseria flavescens NRL30031/H210] Length = 219 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 124/221 (56%), Gaps = 12/221 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-----IRIFFSDTIISLIMHFYVW 63 +ID+ P+ AA +TL ++ V+SL+ G +AV IR F++ + Y+ Sbjct: 6 LIDAIPKFADAA-KLTLELSVYGVVLSLLFGLPVAVVTAYRIRPFYA------LARAYIE 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + R TPLL+QLF ++YGLP +GI +D F +I+L ++Y++E +R+ I+++PKGQ + Sbjct: 59 LSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVIALVFLGASYMAEAVRAGILAVPKGQVE 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GL+R Q R++ LPQ + +++ + ++K TSV S + I E+ + ++ Sbjct: 119 AGKAVGLSRFQVFRYVELPQAWAVAFPAVAANILFLMKETSVISAVGIAELLFVTKDVIG 178 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 Y+ L YLI+ ++ ++E+ + + Y V Sbjct: 179 MDYKTNEALFLLFAAYLIILLPVSLLVRRLENRIRRAKYGV 219 >gi|21492784|ref|NP_659859.1| nopaline ABC transporter, permease protein [Rhizobium etli CFN 42] gi|21467209|gb|AAM54872.1| nopaline ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 249 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 118/201 (58%), Gaps = 14/201 (6%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + P+ L +V+T F +S+ + F A + S +++ Y + FRGTPLL Sbjct: 12 TLPRGLLLTLVLTFASLAAGFAVSVPLAFLRASSNPWASAPVLA-----YTYAFRGTPLL 66 Query: 72 VQLFVIFYGLPHIGIVFDSFVAII---------ISLTLNFSAYISEIIRSSIISIPKGQW 122 VQLF+I+YG+ + +V SF+ + I+ TLN +A+ +E++R I ++P+GQ Sbjct: 67 VQLFLIYYGIGQLPLVRQSFLWAVMREPFWCAFIAFTLNSAAHTTEVVRGGIQAVPRGQI 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A+GL+R T R I+ P T+ + ++E + +LK++S+ASTIT+ E+ A+++V Sbjct: 127 EAAKALGLSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTITLLEVTGLARQLV 186 Query: 183 STTYQPLIIYCELAFVYLILT 203 S T+ P ++ YL+LT Sbjct: 187 SETFAPYEVFIAAGAFYLLLT 207 >gi|218507341|ref|ZP_03505219.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli Brasil 5] Length = 157 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 57/138 (41%), Positives = 93/138 (67%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 F+GTP+L+QLFVI+YGLP IGI ++++A+ +TL+ SAY+ EI RS+I+++PKGQ +A Sbjct: 1 FQGTPMLMQLFVIYYGLPLIGITVNAWIAVAAGVTLHASAYLGEIWRSTIMALPKGQDEA 60 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+GL + I ++ILPQ + S + ++K TS+A+ I E+ + Q + + Sbjct: 61 AKALGLGYRTRIIYVILPQALRISLPSTVGFLVQLVKGTSLAAIIGFTELTRAGQIVSNA 120 Query: 185 TYQPLIIYCELAFVYLIL 202 TYQPLI++ + +Y L Sbjct: 121 TYQPLIVFGLVGALYFAL 138 >gi|94994195|ref|YP_602293.1| cystine transport system permease protein [Streptococcus pyogenes MGAS10750] gi|94547703|gb|ABF37749.1| Cystine transport system permease protein [Streptococcus pyogenes MGAS10750] Length = 216 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 95/147 (64%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +I ++ Y+ I RG P++V LFV+++GLP+ G+ + + + ++ +AYISE+ RS Sbjct: 49 LIHYLVRAYISIMRGVPMIVVLFVLYFGLPYYGLELPALLCAYLGFSMVSAAYISEVFRS 108 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 SI +I KGQW+A+ A+GL ++ IILPQ + PL + I ++KS+S+A+ IT+P Sbjct: 109 SIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIAVPPLGNVIIDMVKSSSLAAMITVP 168 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVY 199 +IFQ A+ I + + +Y +AF+Y Sbjct: 169 DIFQNAKIIGGREWDYMSMYILVAFIY 195 >gi|302339795|ref|YP_003805001.1| polar amino acid ABC transporter inner membrane subunit [Spirochaeta smaragdinae DSM 11293] gi|301636980|gb|ADK82407.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 213 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 64/188 (34%), Positives = 108/188 (57%), Gaps = 2/188 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L ++TL + ++ + +L + F A+ R+ + ++ Y WIFRGTPLL+QLF Sbjct: 11 LLQGCILTLQLYVVTLLFALPLAIFCALGRVS-GPKALDRVLGLYGWIFRGTPLLLQLFF 69 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +YGL GI F+A ++ LN+ AY EI R I SI GQ++A+ A+ + QT+ Sbjct: 70 FYYGLTIFGISLSPFLAASLTFVLNYGAYFMEIFRGGIESIDSGQYEAAKALNMNYWQTM 129 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 R IILPQ + P ++E I+++K T++ I + E+ ++A+ I + + L + A Sbjct: 130 RRIILPQAVRVVLPPTTNEAITLVKDTALVVVIGMGELLRSAKEIFTRDFS-LTPFAVAA 188 Query: 197 FVYLILTS 204 +YL++TS Sbjct: 189 ILYLLMTS 196 >gi|326789760|ref|YP_004307581.1| polar amino acid ABC transporter inner membrane protein [Clostridium lentocellum DSM 5427] gi|326540524|gb|ADZ82383.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium lentocellum DSM 5427] Length = 256 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 113/212 (53%), Gaps = 14/212 (6%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD--------- 51 M +EW II + + +TL I+ I ++ IIG I V+R Sbjct: 1 MSFEWIVKIISTNGPMFLRGAGLTLLISMIGTILGSIIGLLIGVVRTVPMPERGIKRILL 60 Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEII 110 +I+ I+ Y+ FRGTP++VQ VI+YG G+ + A I +++N AY++EI+ Sbjct: 61 KVINAILSAYIAFFRGTPMIVQAMVIYYGSALAFGMDMNVLGAAIFIVSINTGAYMAEIV 120 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R IIS+ KGQ++A+ AIG+ QT+RH++LPQ I +EF+ +K TSV + I+ Sbjct: 121 RGGIISVDKGQFEAAQAIGMNHLQTMRHVVLPQVIRNILPATGNEFVINIKDTSVLNVIS 180 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + E+F + + ++ Y E FV IL Sbjct: 181 VNELFFQTKSVAGNNFR----YFESFFVACIL 208 >gi|225867875|ref|YP_002743823.1| glutamine ABC transporter substrate-binding protein [Streptococcus equi subsp. zooepidemicus] gi|225701151|emb|CAW98036.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. zooepidemicus] Length = 522 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 108/191 (56%), Gaps = 10/191 (5%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISLIMHFYVWIFRGTPLLVQ 73 +TL I+ I + L IG I + R + + +++ Y+ +FRGTP++VQ Sbjct: 298 MTLLISMIGTITGLFIGLLIGIYRTAPKAKGKLAALAQRLFGGLLNVYIEVFRGTPMIVQ 357 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 VI+YG GI D +A I+ +++N AY+SEI+R I ++ KGQ++A+ A+G T Sbjct: 358 SMVIYYGTAQAFGISIDRTLAAIVIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTH 417 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+R I+LPQ + +EF+ +K TSV + I++ E++ + + + TYQ + Sbjct: 418 GQTMRQIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTF 477 Query: 193 CELAFVYLILT 203 +A +Y +LT Sbjct: 478 TIIAIIYFVLT 488 >gi|126737593|ref|ZP_01753323.1| putative amino acid ABC transporter, permease protein [Roseobacter sp. SK209-2-6] gi|126720986|gb|EBA17690.1| putative amino acid ABC transporter, permease protein [Roseobacter sp. SK209-2-6] Length = 253 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 75/194 (38%), Positives = 114/194 (58%), Gaps = 7/194 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L + + T+ I+ I+ VIS+++G +A+ + S ++ YV + R PLL L Sbjct: 40 KFLISGMGDTILISVIAAVISIVLGLIVALPGLAKSRWW-RMVNRVYVELVRSIPLLPML 98 Query: 75 FVIFYGLP------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 F +FYGLP + + D F II+L L+ SA+ +EI R+ I SI KGQ +A+ I Sbjct: 99 FWVFYGLPIIFREMGMNVPIDPFWGAIITLALSDSAFTAEIYRAGIQSIAKGQTEAAQTI 158 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL QT+R++ILPQ I PL+++FI I+K ++ AS I + E+ + A +V T Y+P Sbjct: 159 GLNYLQTMRYVILPQAIRRILPPLANQFIYIVKMSAFASVIGMQELTRRANELVVTEYRP 218 Query: 189 LIIYCELAFVYLIL 202 L IY L YLIL Sbjct: 219 LEIYSLLILEYLIL 232 >gi|195978808|ref|YP_002124052.1| amino acid ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225871211|ref|YP_002747158.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. equi 4047] gi|195975513|gb|ACG63039.1| amino acid ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225700615|emb|CAW95155.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. equi 4047] Length = 522 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 108/191 (56%), Gaps = 10/191 (5%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISLIMHFYVWIFRGTPLLVQ 73 +TL I+ I + L IG I + R + + +++ Y+ +FRGTP++VQ Sbjct: 298 MTLLISMIGTITGLFIGLLIGIYRTAPKAKGKLAALAQRLFGGLLNVYIEVFRGTPMIVQ 357 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 VI+YG GI D +A I+ +++N AY+SEI+R I ++ KGQ++A+ A+G T Sbjct: 358 SMVIYYGTAQAFGISIDRTLAAIVIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTH 417 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+R I+LPQ + +EF+ +K TSV + I++ E++ + + + TYQ + Sbjct: 418 GQTMRQIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTF 477 Query: 193 CELAFVYLILT 203 +A +Y +LT Sbjct: 478 TIIAIIYFVLT 488 >gi|307262179|ref|ZP_07543830.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868156|gb|EFM99981.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 219 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 60/179 (33%), Positives = 107/179 (59%), Gaps = 2/179 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++++ P+ + AAI+ TL ++ ++SL+ G IA++ + L Y+ + R T Sbjct: 6 VVNAIPRFIDAAII-TLQLSFWGILLSLVFGLLIAIVTAYQVKPFYGL-ARGYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF ++YGLP IGI +D F II+L ++Y++E +R+ ++++PKGQ +A+ AI Sbjct: 64 PLLIQLFFLYYGLPKIGIKWDGFTCGIIALVFLGASYMAEALRAGLLAVPKGQTEAAKAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GL R Q R++I PQ S + + + ++K TSV S + + E+ + I+ Y+ Sbjct: 124 GLNRFQVFRYVIFPQAWAVSIPAIGANVLFLIKETSVISAVAVAELMFVTKDIIGMDYK 182 >gi|306827502|ref|ZP_07460785.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pyogenes ATCC 10782] gi|304430300|gb|EFM33326.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pyogenes ATCC 10782] Length = 216 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 95/147 (64%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +I ++ Y+ I RG P++V LFV+++GLP+ G+ + + + ++ +AYISE+ RS Sbjct: 49 LIHYLVRAYISIMRGVPMIVVLFVLYFGLPYYGLELPALLCAYLGFSMVSAAYISEVFRS 108 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 SI +I KGQW+A+ A+GL ++ IILPQ + PL + I ++KS+S+A+ IT+P Sbjct: 109 SIEAIDKGQWEAAKALGLPYGLMVKKIILPQAFRIAVPPLGNVIIDMVKSSSLAAMITVP 168 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVY 199 +IFQ A+ I + + +Y +AF+Y Sbjct: 169 DIFQNAKIIGGREWDYMSMYILVAFIY 195 >gi|146309286|ref|YP_001189751.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina ymp] gi|145577487|gb|ABP87019.1| amino acid ABC transporter membrane protein 2, PAAT family [Pseudomonas mendocina ymp] Length = 256 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 121/204 (59%), Gaps = 11/204 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +II P+L A++ TL + I+ V LI+ + + R + + + Y++ F Sbjct: 30 WAVIIKWLPRLSQGALL-TLELVAIAVVAGLILALPMGIARAS-RHWYVRALPYGYIFFF 87 Query: 66 RGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+++YGL V D + II++TL+ +AYI+EI+R +I + Sbjct: 88 RGTPLLVQLFLVYYGLAQFDAVRQGPLWPYLRDPYWCAIITMTLHTAAYIAEILRGAIQA 147 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P G+ +A++A+G++R Q + +IILP+ S+E I +LK++++AST+T+ E+ Sbjct: 148 VPPGEVEAAHALGMSRAQAMLYIILPRAARIGLPAYSNEVILMLKASALASTVTLLELTG 207 Query: 177 TAQRIVSTTYQPLIIYCELAFVYL 200 A+ I++ TY P+ I+ YL Sbjct: 208 MARTIIARTYLPVEIFFAAGLFYL 231 >gi|104784121|ref|YP_610619.1| amino acid ABC transporter permease [Pseudomonas entomophila L48] gi|95113108|emb|CAK17836.1| putative amino acid ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 229 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 126/209 (60%), Gaps = 11/209 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +II P+L A +TL + I+ + LI+ + + R + + + Y++ F Sbjct: 3 WEVIIKWLPRLAQGA-TLTLELVAIAVIAGLILAIPLGIARSS-RHWYVRALPYGYIFFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+++YGL +V DS F ++++TL+ +AYI+EI+R ++ + Sbjct: 61 RGTPLLVQLFLVYYGLAQFDLVRDSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQA 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+G+ +A+ A+G++R + + +I+LP+ S+E I +LK++++AST+T+ E+ Sbjct: 121 IPRGEIEAARALGMSRGKALFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSF 205 A+ I++ TY P+ I+ YL+++ F Sbjct: 181 MARTIIARTYLPVEIFFAAGVFYLLISFF 209 >gi|50914070|ref|YP_060042.1| cystine transport system permease protein [Streptococcus pyogenes MGAS10394] gi|50903144|gb|AAT86859.1| Cystine transport system permease protein [Streptococcus pyogenes MGAS10394] Length = 216 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 95/147 (64%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +I ++ Y+ I RG P++V LFV+++GLP+ G+ + + + ++ +AYISE+ RS Sbjct: 49 LIHYLVRAYISIMRGVPMIVVLFVLYFGLPYYGLELPALLCAYLGFSMVSAAYISEVFRS 108 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 SI +I KGQW+A+ A+GL ++ IILPQ + PL + I ++KS+S+A+ IT+P Sbjct: 109 SIEAIDKGQWEAAKALGLPYSLMVKKIILPQAFRIAVPPLGNVIIDMVKSSSLAAMITVP 168 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVY 199 +IFQ A+ I + + +Y +AF+Y Sbjct: 169 DIFQNAKIIGGREWDYMSMYILVAFIY 195 >gi|260578024|ref|ZP_05845947.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium jeikeium ATCC 43734] gi|258603851|gb|EEW17105.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium jeikeium ATCC 43734] Length = 315 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 70/233 (30%), Positives = 134/233 (57%), Gaps = 29/233 (12%) Query: 3 YEW---FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 Y W F ++D+ + A + T+ + ++ +I ++IG +AV+R+ + ++ + Sbjct: 52 YHWDTYFQYLLDT---RIVKAAMHTIALTILAMIIGVVIGAIVAVLRMS-PNPVLQGVAW 107 Query: 60 FYVWIFRGTPLLVQLFVIFYGL-----PHIGIVF----------DSFVAIIISLTLNFSA 104 ++W+FRGTP+ VQL +F+GL + + F ++F+ ++ L LN +A Sbjct: 108 LFLWVFRGTPVYVQL--VFWGLLSSLYQSVSVGFAEIDLEQVLQNAFILAVLGLGLNEAA 165 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 Y++EI+R+ I ++P+GQ +AS A+G+T Q +R ++PQ + P +EFIS+LK+TS Sbjct: 166 YMAEIVRAGIQAVPEGQSEASKALGMTWGQNMRRTVMPQAMRIIIPPTGNEFISLLKTTS 225 Query: 165 VASTITIP---EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + I +P E++ A I ++ +QP+ + A YL++TS ++Q +E Sbjct: 226 L--VIAVPYTAELYGRATDISNSLFQPVPLLLVAATWYLVITSILMVVQFYVE 276 >gi|149377566|ref|ZP_01895306.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Marinobacter algicola DG893] gi|149358179|gb|EDM46661.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Marinobacter algicola DG893] Length = 224 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 61/167 (36%), Positives = 104/167 (62%), Gaps = 4/167 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL +A + V++LI+ AV+R+ + L + F + FRGTPLLVQLF+ +YGLP Sbjct: 22 LTLQLAGVGMVLALILACLFAVVRVLRIPVLNQLTIVF-ISFFRGTPLLVQLFLFYYGLP 80 Query: 83 HIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + V D A I+ LT++FSAY++E IR++I+ + + Q +A+ +IG+T Q +R I Sbjct: 81 QLVSALTVIDGITATIMGLTMHFSAYMAESIRAAIVGVDRSQTEAALSIGMTNGQLMRRI 140 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +LPQ + L + FI ++K+TS+A T+ + E+ Q+ + ++ Sbjct: 141 VLPQATRVALPTLMNYFIDMIKATSLAFTLGVTELMGATQKEAAGSF 187 >gi|139473935|ref|YP_001128651.1| transport system membrane protein [Streptococcus pyogenes str. Manfredo] gi|134272182|emb|CAM30427.1| transport system membrane protein [Streptococcus pyogenes str. Manfredo] Length = 216 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 95/147 (64%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +I ++ Y+ I RG P++V LFV+++GLP+ G+ + + + ++ +AYISE+ RS Sbjct: 49 LIHYLVRAYISIMRGVPMIVVLFVLYFGLPYYGLELPALLCAYLGFSMVSAAYISEVFRS 108 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 SI +I KGQW+A+ A+GL ++ IILPQ + PL + I ++KS+S+A+ IT+P Sbjct: 109 SIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIAVPPLGNVIIDMVKSSSLAAMITVP 168 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVY 199 +IFQ A+ I + + +Y +AF+Y Sbjct: 169 DIFQNAKIIGGREWDYMSMYILVAFIY 195 >gi|15674926|ref|NP_269100.1| putative ABC transporter permease [Streptococcus pyogenes M1 GAS] gi|71910520|ref|YP_282070.1| cystine transporter permease [Streptococcus pyogenes MGAS5005] gi|209559254|ref|YP_002285726.1| Probable amino-acid ABC transporter permease protein yckA [Streptococcus pyogenes NZ131] gi|251782585|ref|YP_002996888.1| cystine transport system permease [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|13622068|gb|AAK33821.1| putative ABC transporter (permease) [Streptococcus pyogenes M1 GAS] gi|71853302|gb|AAZ51325.1| cystine transport system permease protein [Streptococcus pyogenes MGAS5005] gi|209540455|gb|ACI61031.1| Probable amino-acid ABC transporter permease protein yckA [Streptococcus pyogenes NZ131] gi|242391215|dbj|BAH81674.1| cystine transport system permease protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 216 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 95/147 (64%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +I ++ Y+ I RG P++V LFV+++GLP+ G+ + + + ++ +AYISE+ RS Sbjct: 49 LIHYLVRAYISIMRGVPMIVVLFVLYFGLPYYGLELPALLCAYLGFSMVSAAYISEVFRS 108 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 SI +I KGQW+A+ A+GL ++ IILPQ + PL + I ++KS+S+A+ IT+P Sbjct: 109 SIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIAVPPLGNVIIDMVKSSSLAAMITVP 168 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVY 199 +IFQ A+ I + + +Y +AF+Y Sbjct: 169 DIFQNAKIIGGREWDYMSMYILVAFIY 195 >gi|259501521|ref|ZP_05744423.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners DSM 13335] gi|302191506|ref|ZP_07267760.1| Glutamine ABC transporter, permease protein [Lactobacillus iners AB-1] gi|309804259|ref|ZP_07698336.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LactinV 11V1-d] gi|309805507|ref|ZP_07699552.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LactinV 09V1-c] gi|309808597|ref|ZP_07702489.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LactinV 01V1-a] gi|309809500|ref|ZP_07703358.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners SPIN 2503V10-D] gi|312871490|ref|ZP_07731584.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LEAF 3008A-a] gi|312872417|ref|ZP_07732486.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LEAF 2062A-h1] gi|312874423|ref|ZP_07734453.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LEAF 2052A-d] gi|312874570|ref|ZP_07734595.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LEAF 2053A-b] gi|325911827|ref|ZP_08174231.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners UPII 143-D] gi|325913453|ref|ZP_08175819.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners UPII 60-B] gi|329920202|ref|ZP_08277014.1| putative glutamine ABC transporter permease protein GlnP [Lactobacillus iners SPIN 1401G] gi|259167039|gb|EEW51534.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners DSM 13335] gi|308163662|gb|EFO65932.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LactinV 11V1-d] gi|308165158|gb|EFO67396.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LactinV 09V1-c] gi|308168071|gb|EFO70197.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LactinV 01V1-a] gi|308170172|gb|EFO72207.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners SPIN 2503V10-D] gi|311089961|gb|EFQ48380.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LEAF 2053A-b] gi|311090035|gb|EFQ48449.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LEAF 2052A-d] gi|311091999|gb|EFQ50374.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LEAF 2062A-h1] gi|311093010|gb|EFQ51360.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LEAF 3008A-a] gi|325476333|gb|EGC79495.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners UPII 143-D] gi|325477222|gb|EGC80368.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners UPII 60-B] gi|328936423|gb|EGG32869.1| putative glutamine ABC transporter permease protein GlnP [Lactobacillus iners SPIN 1401G] Length = 219 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 72/202 (35%), Positives = 122/202 (60%), Gaps = 10/202 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W NL + L ++VT+ I+ +S ++S I+G F+ ++R + +IS I+ F V Sbjct: 8 YSWINL------RFLLQGLMVTVYISIVSIILSFILGLFLGIVR-YLKIKVISHIVGFIV 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP +GIV + A II+L + A ++EI+RS I ++ KGQ Sbjct: 61 DILRNLPLLLIIFFAYFGLPQLGIVTNVTCAAIIALVVFEGAMLAEIVRSGIGAVNKGQL 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + G+T Q + H+++PQ + + S+F+S++K TS+A+ I +PE+ AQ I Sbjct: 121 EGALSNGMTYAQAMYHVVVPQALHFMIPAILSQFVSLIKDTSLATIIVLPELLYHAQIIY 180 Query: 183 S--TTYQPLIIYCELAFVYLIL 202 S TTY L +Y +A +Y I+ Sbjct: 181 SQNTTYL-LPMYVIVALMYFII 201 >gi|261416889|ref|YP_003250572.1| polar amino acid ABC transporter, inner membrane subunit [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373345|gb|ACX76090.1| polar amino acid ABC transporter, inner membrane subunit [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326258|gb|ADL25459.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Fibrobacter succinogenes subsp. succinogenes S85] Length = 219 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 62/177 (35%), Positives = 108/177 (61%), Gaps = 7/177 (3%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 ++S +L+ TL I ++ + S+ +G +AV+++ I+ + FY+ + RGTP Sbjct: 4 LNSLLPILWGGFCTTLAIFALTLLFSIPLGLLVAVLKMS-RYRIVRYPVSFYISVMRGTP 62 Query: 70 LLVQLFVIFYGL----PHIGI--VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 LL+Q+ I++G + G+ FD F A+I++ ++N++AY +EI R I SIPKGQ++ Sbjct: 63 LLLQIVAIYFGSYYLSEYTGVEFSFDRFPAVIVAFSINYAAYFAEIFRGGIQSIPKGQYE 122 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 A+ +GLTR QT IILPQ + ++E I+++K TS+A I + E+F A++ Sbjct: 123 AAAMLGLTRGQTFYRIILPQVVKRVVPASANEVITLVKDTSLAQVIAVTELFALAKK 179 >gi|309806886|ref|ZP_07700873.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LactinV 03V1-b] gi|308166752|gb|EFO68944.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LactinV 03V1-b] Length = 244 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 72/202 (35%), Positives = 122/202 (60%), Gaps = 10/202 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W NL + L ++VT+ I+ +S ++S I+G F+ ++R + +IS I+ F V Sbjct: 8 YSWINL------RFLLQGLMVTVYISIVSIILSFILGLFLGIVR-YLKIKVISHIVGFIV 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP +GIV + A II+L + A ++EI+RS I ++ KGQ Sbjct: 61 DILRNLPLLLIIFFAYFGLPQLGIVTNVTCAAIIALVVFEGAMLAEIVRSGIGAVNKGQL 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + G+T Q + H+++PQ + + S+F+S++K TS+A+ I +PE+ AQ I Sbjct: 121 EGALSNGMTYAQAMYHVVVPQALHFMIPAILSQFVSLIKDTSLATIIVLPELLYHAQIIY 180 Query: 183 S--TTYQPLIIYCELAFVYLIL 202 S TTY L +Y +A +Y I+ Sbjct: 181 SQNTTYL-LPMYVIVALMYFII 201 >gi|319946946|ref|ZP_08021180.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus australis ATCC 700641] gi|319746994|gb|EFV99253.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus australis ATCC 700641] Length = 754 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 119/207 (57%), Gaps = 9/207 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + L+ +++ QLL + + VT+ +A +SF I+++IG + + + +V + Sbjct: 537 WGLLQNNYKQLL-SGLGVTIALALLSFAIAMVIGIIFGMFSVS-PYKWLRWTAEIFVDVI 594 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RG PL++ IF+G+P++ + F+A I+L+LN +AYI+EI+R I ++P Sbjct: 595 RGIPLMILAAFIFWGIPNLIESMTGHQSPINDFLAGTIALSLNAAAYIAEIVRGGIQAVP 654 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+FQT Sbjct: 655 AGQMEASRSLGISYSKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTG 714 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSF 205 + I++ YQ +Y LA YL++ + Sbjct: 715 KIIIARNYQSFKMYAILAVFYLVIITL 741 >gi|229028210|ref|ZP_04184350.1| Amino acid ABC transproter, permease [Bacillus cereus AH1271] gi|228733084|gb|EEL83926.1| Amino acid ABC transproter, permease [Bacillus cereus AH1271] Length = 230 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 112/187 (59%), Gaps = 3/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A IV TL + S V+ +IG A RI S+ I++ I H Y+ I Sbjct: 2 FEIFMSTYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-SNKILNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYPLAMRRIILPQAFRQSLPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGN 178 Query: 186 YQPLIIY 192 +Q L Y Sbjct: 179 FQQLDTY 185 >gi|148993850|ref|ZP_01823252.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP9-BS68] gi|168489068|ref|ZP_02713267.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP195] gi|147927675|gb|EDK78700.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP9-BS68] gi|183572432|gb|EDT92960.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP195] gi|332073579|gb|EGI84058.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17570] Length = 721 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 130/222 (58%), Gaps = 14/222 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYV 62 W L+ +++ QLL + + +TL +A ISF I+++IG + + + S +IS I +V Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEI---FV 558 Query: 63 WIFRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSII 115 + RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I Sbjct: 559 DVIRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQ 618 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P GQ +AS ++G++ +T+R IILPQ+ ++F+ LK T++ S I + E+F Sbjct: 619 AVPVGQMEASRSLGISYGKTMRKIILPQSTKLMLPNFVNQFVIALKDTTIVSAIGLVELF 678 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 QT + I++ YQ +Y LA YL++ + + ++E + Sbjct: 679 QTGKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|262274234|ref|ZP_06052046.1| ABC polar amino acid transporter inner membrane protein [Grimontia hollisae CIP 101886] gi|262222044|gb|EEY73357.1| ABC polar amino acid transporter inner membrane protein [Grimontia hollisae CIP 101886] Length = 201 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 64/162 (39%), Positives = 103/162 (63%), Gaps = 3/162 (1%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISI 117 Y+ FRGTPLLVQLF+++YGLP + +F D+F A +I L+L+FSAY++E IR +I+ I Sbjct: 36 YISFFRGTPLLVQLFLLYYGLPQVFPIFVGMDAFTAAVIGLSLHFSAYMAESIRGAILGI 95 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 K Q +AS ++G+T Q ++ IILPQ + L + FI ++KSTS+A T+ + EI Sbjct: 96 DKHQMEASLSVGMTEIQAMQRIILPQAARVATPSLMNYFIDMIKSTSLAFTLGVAEIMAK 155 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 AQ S++++ + +A +Y ++ F IQ +E + + Sbjct: 156 AQMEASSSFKFFESFLAVALIYWLVVIFFTRIQTVMEVRLNK 197 >gi|154684862|ref|YP_001420023.1| YxeN [Bacillus amyloliquefaciens FZB42] gi|154350713|gb|ABS72792.1| YxeN [Bacillus amyloliquefaciens FZB42] Length = 224 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 126/222 (56%), Gaps = 12/222 (5%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHF 60 +W + +FP L+ A+ +TL +A + V ++I G +A+I R+ ++ + Sbjct: 5 DW-GFMFSAFPALI-EALPITLLMAVAAMVFAVIGGLILALITKNRV----PVLHQLSKV 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GI-VFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 Y+ FRG P LVQLF+I+YGLP + G+ + A II L+L +AY++EI R+++ S+ Sbjct: 59 YISFFRGVPTLVQLFLIYYGLPQLFPGMSKMTALTAAIIGLSLKNAAYLAEIFRAALNSV 118 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 +GQ +A ++G+T+ Q R II PQ + + + FI +LK TS+A T+ + E+F Sbjct: 119 DEGQLEACLSVGMTKSQAYRRIIFPQAVRNALPATGNTFIGLLKETSLAFTLGVMEMFAQ 178 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + S + Y +A +Y ILT ++Q +E ++++ Sbjct: 179 GKMYASGNLKYFETYLAVAVMYWILTIIYSVLQDLLERAISK 220 >gi|296333449|ref|ZP_06875902.1| High affinity arginine ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675045|ref|YP_003866717.1| high affinity arginine ABC transporter permease [Bacillus subtilis subsp. spizizenii str. W23] gi|296149647|gb|EFG90543.1| High affinity arginine ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413289|gb|ADM38408.1| High affinity arginine ABC transporter (permease) [Bacillus subtilis subsp. spizizenii str. W23] Length = 219 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 130/212 (61%), Gaps = 8/212 (3%) Query: 12 SFPQL--LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + PQ+ + + +TL I +S +I LI+G +++ +I +I I FY +FRGTP Sbjct: 8 TIPQIPFILEGLAITLKIVIVSAIIGLILGIVLSLCKISTFRPLI-WIADFYTSVFRGTP 66 Query: 70 LLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 L++QL ++++GLP + G D F A +++L+LN +AY+SEIIR+ I +I KGQ +A+ A+ Sbjct: 67 LVLQLMIVYFGLPQLLGFQIDQFWAAVVALSLNSAAYVSEIIRAGINAIDKGQKEAAVAL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY-- 186 G+ + ++ ++LPQ + + +E I++ K +++ + I + ++ + A + + TY Sbjct: 127 GVPYGKMMKDLLLPQAFKNISPAIVNELITLTKESAIVTVIGLGDVMRRAYQSGAATYNY 186 Query: 187 -QPLIIYCELAFVY-LILTSFCYIIQIKIESS 216 +PLII + +V LILT ++ K++S+ Sbjct: 187 LEPLIIAGLIYYVLVLILTFIGKAVERKLKSN 218 >gi|295675492|ref|YP_003604016.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] gi|295435335|gb|ADG14505.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 238 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 70/204 (34%), Positives = 115/204 (56%), Gaps = 3/204 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y+W L P+ L A+ + TL + ++FV++L++G A+ ++ I Sbjct: 1 MSYQWLTLW-GYVPEFLSASWL-TLQVTVLAFVLALVLGLLTALAGAS-PLAVLRWIARG 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV I R TP+L+Q+F++F+GLP G+ D++ A +I+L LN AY+SE+ R+ I S+P+G Sbjct: 58 YVEIIRNTPVLLQIFIVFFGLPSAGVSLDAYWAGVIALGLNVGAYLSEVFRAGIQSVPRG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ +GL R Q ++LPQ + + I +L TS+ S I +PE+ TA Sbjct: 118 QIEAAGILGLERAQIFVEVVLPQATRAVYPAIVNYLIQLLLGTSLLSAIALPELTGTATV 177 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 I S T L + YL+L++ Sbjct: 178 INSRTLLYLQTFSVTLVAYLVLSN 201 >gi|319939264|ref|ZP_08013627.1| amino acid ABC transporter [Streptococcus anginosus 1_2_62CV] gi|319811660|gb|EFW07936.1| amino acid ABC transporter [Streptococcus anginosus 1_2_62CV] Length = 727 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 126/220 (57%), Gaps = 10/220 (4%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+ +++ QLL + + +T+ +A +SF I+++IG + + T+ +I +V + Sbjct: 510 W-GLLQNNYKQLL-SGLGITIALALLSFAIAMVIGIIFGMFSVSPVKTL-RVISEIFVDV 566 Query: 65 FRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 RG PL++ IF+G+P++ + FVA I+L+LN AYI+EI+R I ++ Sbjct: 567 IRGIPLMILAAFIFWGIPNLIESMTGHQSPINDFVAGTIALSLNAGAYIAEIVRGGIQAV 626 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+FQT Sbjct: 627 PVGQMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLVELFQT 686 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + I++ YQ +Y LA YLI+ + + ++E + Sbjct: 687 GKIIIARNYQSFKMYAILAVFYLIIITLLTRLAKRLEKRI 726 >gi|300697046|ref|YP_003747707.1| amino acid transmembrane ABC transporter protein [Ralstonia solanacearum CFBP2957] gi|299073770|emb|CBJ53291.1| putative amino acid transmembrane ABC transporter protein [Ralstonia solanacearum CFBP2957] Length = 262 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 95/161 (59%), Gaps = 6/161 (3%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLP--HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 FY+W+ RGTPLLVQ+ +F LP + D F + ++L N AY +E IR+ ++++ Sbjct: 96 FYIWVIRGTPLLVQILFVFLALPVWLPWLQMDDFTSACVALAFNAGAYNAESIRAGLLAV 155 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKGQ +A++++GL+R T +I PQ + PL + FI++LK +S+A I + E+ Sbjct: 156 PKGQLEAAHSLGLSRWHTFADVIFPQAFKVALPPLVNNFIALLKDSSLAYAIGVVELTNV 215 Query: 178 AQRIVSTTYQPLIIYCELAFVYL----ILTSFCYIIQIKIE 214 R+ + T+QPL A +YL +LT F ++ +++ Sbjct: 216 GNRLQAATFQPLPALVTTAVIYLALTTVLTQFSNAVEQRMD 256 >gi|241895264|ref|ZP_04782560.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] gi|241871570|gb|EER75321.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] Length = 493 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 65/181 (35%), Positives = 111/181 (61%), Gaps = 3/181 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ +A I +I+G A++++ S + Y+ RG PLL+Q+F++++G Sbjct: 293 TIGLAVIGVFFGIILGILFALMKLS-SIKPFKWLASAYIEAVRGVPLLIQVFIVYFGTQA 351 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 IG+ SF+A I++ LN +AY++EIIRS I ++P GQ +A+ ++G T+ QT+R++ILPQ Sbjct: 352 IGVHVSSFLAGAIAMFLNSAAYVAEIIRSGIQAVPTGQTEAARSLGFTKNQTMRYMILPQ 411 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVSTTYQPLIIYCELAFVYLIL 202 I L +EF++++K SV S I + E+ FQT+ + +++P I A +Y IL Sbjct: 412 AIKNILPALGNEFVTVIKEGSVVSVIGVGELTFQTS-VVQGASFKPFIPLIITAAIYFIL 470 Query: 203 T 203 T Sbjct: 471 T 471 >gi|227112257|ref|ZP_03825913.1| ABC transporter permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 225 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 115/219 (52%), Gaps = 2/219 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y+W I + QLL + T+ I S +I ++ G +A +++ ++ L Sbjct: 1 MSYQWDFSAIWPYHQLLLEGLWGTIKIGATSILIGMVAGMVLAAMKMS-PQRLLRLPAAM 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 + +R TP LV F I+Y LP I + F F A +I+L+ SA+ +E+ R +I SI Sbjct: 60 LIGFYRNTPALVHFFWIYYALPVITPLTFSPFTAAVIALSAQSSAFYAEVYRGAISSIHT 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+ + A+G+++ +R +ILPQ + P ++KSTS+AS++ E+ A Sbjct: 120 GQWEGAKALGMSKSTALRRVILPQALRRMIPPFIERSFELIKSTSLASSLAYSELLYQAM 179 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 +I S TY+PL +Y +A +Y L + IE ++ Sbjct: 180 QINSQTYRPLEVYSLVAVMYFTLLLLISLFSQHIEKRLS 218 >gi|222102076|ref|YP_002546666.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Agrobacterium radiobacter K84] gi|221728193|gb|ACM31202.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Agrobacterium radiobacter K84] Length = 218 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 75/218 (34%), Positives = 124/218 (56%), Gaps = 4/218 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +EW + IID+ P LL A V + +A S + +I+G I VIR + + ISLI Sbjct: 1 MTFEW-SAIIDALPALLRGAAVTVM-VAAASLLAGMILGTIIGVIRTY-APKYISLIAQI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + RGTP++VQ+ I++ LP + I + A +I+LT+N SAY++EI+R +++P Sbjct: 58 YIGLIRGTPMVVQIMFIYFALPSLLDIKLTALTAGMIALTVNSSAYLAEIVRGGFMAVPH 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G +A A+GL + + +II P L ++FI LK TS+ I + E+ +T Q Sbjct: 118 GLREAGLAMGLPLHRVLLYIIGPVAFRRMVPALGNQFIIGLKDTSLLIVIGVAELTRTGQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 I++ Y+ + I+ + +YL++ S II IE + Sbjct: 178 EIMTENYRAVEIWAAVGVIYLVIISIMAIIFRVIEKRI 215 >gi|116751317|ref|YP_848004.1| binding-protein-dependent transport systems inner membrane component [Syntrophobacter fumaroxidans MPOB] gi|116700381|gb|ABK19569.1| binding-protein-dependent transport systems inner membrane component [Syntrophobacter fumaroxidans MPOB] Length = 224 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 72/208 (34%), Positives = 115/208 (55%), Gaps = 2/208 (0%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D P L V L IA +F L IG + R++ S +I L+ YV +FRG PL Sbjct: 10 DVLPAFLKGLKVSLLLIAPSAF-FGLCIGILVGACRVYGSRLVI-LLSDLYVALFRGVPL 67 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 +VQLFV ++GLPH+ I FVA ++ +L AY SE IR +++SI KGQ A+ A+G Sbjct: 68 VVQLFVWYFGLPHLKIYLSPFVASVLGFSLCSGAYHSEYIRGALLSIRKGQMLAAQALGF 127 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 ++ + + +ILPQ + + +E I ++K +S+A +T E+ A+ + S +++ I Sbjct: 128 SKLRMVLSVILPQALRRALPGCGNEIIYLIKYSSLAYMVTCIELTGEAKILASHSFKYTI 187 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVT 218 ++ + VYL L S + IE V+ Sbjct: 188 VFLSVGIVYLFLVSLASWLLHHIEDKVS 215 >gi|328554131|gb|AEB24623.1| YqiY [Bacillus amyloliquefaciens TA208] gi|328912522|gb|AEB64118.1| high affinity arginine ABC transporter (permease) [Bacillus amyloliquefaciens LL3] Length = 219 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 121/207 (58%), Gaps = 12/207 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVI 77 + VTL I +S VI L++G +++ +I TI L I FY IFRGTPL++QL +I Sbjct: 18 GLAVTLKIVLVSAVIGLVLGIVLSLFKI---STISPLKWIADFYTSIFRGTPLVLQLMII 74 Query: 78 FYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++G+P + G D F A + +L+LN +AY+SEIIR+ I +I KGQ +A+ A+G+ + + Sbjct: 75 YFGMPQLLGFQIDQFWAAVTALSLNSAAYVSEIIRAGINAIDKGQKEAAVALGVPYGKMM 134 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY---QPLIIYC 193 + ++LPQ + + +E I++ K +++ + I + +I + A + + TY +PLI+ Sbjct: 135 KDLLLPQAFKNISPAIINELITLTKESAIVTVIGLGDIMRRAYQSGAATYNYLEPLIVA- 193 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQH 220 F+Y +L I +E + + Sbjct: 194 --GFIYYVLVLILAFIGKGVERKLKAN 218 >gi|225870676|ref|YP_002746623.1| transport system membrane protein [Streptococcus equi subsp. equi 4047] gi|225700080|emb|CAW94151.1| transport system membrane protein [Streptococcus equi subsp. equi 4047] Length = 217 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 94/143 (65%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV I RG P++V LFV+++GLP+ G+ + + + +L +AYISE+ R+SI +I +G Sbjct: 57 YVSIMRGVPMIVVLFVLYFGLPYYGLELSALLCAYLGFSLVSAAYISEVFRASIDAIDQG 116 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A+GL ++H+ILPQ + PL + I ++KS+S+A+ IT+P+IFQ A+ Sbjct: 117 QWEAARALGLPYVSIVKHVILPQAFRIAIPPLGNVVIDMVKSSSLAAMITVPDIFQKAKI 176 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I + + +Y +AF+Y ++ Sbjct: 177 IGGREWDYMSMYILVAFIYWVIA 199 >gi|148989263|ref|ZP_01820643.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP6-BS73] gi|147925241|gb|EDK76320.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP6-BS73] Length = 721 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 130/223 (58%), Gaps = 14/223 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYV 62 W L+ +++ QLL + + +TL +A ISF I+++IG + + + S +IS I +V Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEI---FV 558 Query: 63 WIFRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSII 115 + RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I Sbjct: 559 DVIRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQ 618 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+F Sbjct: 619 AVPVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELF 678 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 QT + I++ YQ +Y LA YL++ + + ++E ++ Sbjct: 679 QTGKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRIS 721 >gi|270290991|ref|ZP_06197214.1| polar amino acid transport system permease [Pediococcus acidilactici 7_4] gi|304385263|ref|ZP_07367608.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Pediococcus acidilactici DSM 20284] gi|270280387|gb|EFA26222.1| polar amino acid transport system permease [Pediococcus acidilactici 7_4] gi|304328470|gb|EFL95691.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Pediococcus acidilactici DSM 20284] Length = 216 Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 68/202 (33%), Positives = 114/202 (56%), Gaps = 3/202 (1%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P LL A +TL + + + SLI+G F+A + + + I+ YVW+ RGTPLL+Q Sbjct: 12 PSLLSGA-AMTLQVFIWTIIGSLILGVFLA-LGLVSKFKPLQYIISAYVWLMRGTPLLLQ 69 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 L +FYGLP +GIVF + A + + LN++AY +EI R + S+ KGQ++A + +T Sbjct: 70 LIFVFYGLPTVGIVFPRYEAALFAFILNYAAYFAEIFRGGLQSVDKGQYEAGRVLQMTYW 129 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 QT + ++LPQ + +E I+++K +S+ I I ++ + A + + L+ + Sbjct: 130 QTTKKVVLPQVAKIVLPSIGNEVINLVKDSSLVYVIGIGDLLR-AGNVAAARDVTLVPFI 188 Query: 194 ELAFVYLILTSFCYIIQIKIES 215 + +YLILT C K+E Sbjct: 189 LVGIMYLILTGICTFFLRKVEK 210 >gi|283796751|ref|ZP_06345904.1| L-cystine ABC transporter, permease protein [Clostridium sp. M62/1] gi|291075637|gb|EFE13001.1| L-cystine ABC transporter, permease protein [Clostridium sp. M62/1] gi|295092596|emb|CBK78703.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Clostridium cf. saccharolyticum K10] Length = 221 Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 125/212 (58%), Gaps = 9/212 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++AA+ TL +A +SFV+SL++ IA I +F ++ + YV FRGTPL+ QLF+ Sbjct: 13 MFAALPTTLSLAAVSFVLSLLLAVVIAGID-YFKVPVLRQVCAVYVSFFRGTPLIPQLFL 71 Query: 77 IFYGLP-HIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 +++G+P I + D +F I+ LTLN +AY+ E +R +++S+P GQ +A+ A G+T Sbjct: 72 LYFGIPTFIPELRDIPAFAVCIVGLTLNSAAYMKEAVRGALLSVPAGQREAALAHGMTPL 131 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q + HI+ PQ + + L + + I+K TS+A TI + EI A S T++ Y Sbjct: 132 QAMAHIVFPQAVRVAIPSLFNNLVDIVKGTSMAFTIGVIEITAAANLRASVTFR----YF 187 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 E A++ L+L + I+ ++ ++ + +S Sbjct: 188 E-AYMLLMLLYWVIILVLERAEALLEKKFSAG 218 >gi|16079453|ref|NP_390277.1| High affinity arginine ABC transporter permease [Bacillus subtilis subsp. subtilis str. 168] gi|221310317|ref|ZP_03592164.1| hypothetical protein Bsubs1_13151 [Bacillus subtilis subsp. subtilis str. 168] gi|221314641|ref|ZP_03596446.1| hypothetical protein BsubsN3_13072 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319564|ref|ZP_03600858.1| hypothetical protein BsubsJ_12993 [Bacillus subtilis subsp. subtilis str. JH642] gi|221323840|ref|ZP_03605134.1| hypothetical protein BsubsS_13122 [Bacillus subtilis subsp. subtilis str. SMY] gi|321311878|ref|YP_004204165.1| High affinity arginine ABC transporter permease [Bacillus subtilis BSn5] gi|1731063|sp|P54536|ARTQ_BACSU RecName: Full=Arginine transport system permease protein ArtQ gi|1303950|dbj|BAA12605.1| YqiY [Bacillus subtilis] gi|2634831|emb|CAB14328.1| High affinity arginine ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] gi|291484835|dbj|BAI85910.1| hypothetical protein BSNT_03567 [Bacillus subtilis subsp. natto BEST195] gi|320018152|gb|ADV93138.1| High affinity arginine ABC transporter (permease) [Bacillus subtilis BSn5] Length = 219 Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 129/212 (60%), Gaps = 8/212 (3%) Query: 12 SFPQL--LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + PQ+ + + +TL I +S +I LI+G +++ +I I I FY +FRGTP Sbjct: 8 TIPQIPFILEGLAITLKIVVVSAIIGLILGIVLSLCKISTFRPFI-WIADFYTSVFRGTP 66 Query: 70 LLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 L++QL ++++GLP + G D F A +++L+LN +AY+SEIIR+ I +I KGQ +A+ A+ Sbjct: 67 LVLQLMIVYFGLPQLLGFQIDQFWAAVVALSLNSAAYVSEIIRAGINAIDKGQKEAAVAL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY-- 186 G+ + ++ ++LPQ + + +E I++ K +++ + I + ++ + A + + TY Sbjct: 127 GVPYGKMMKDLLLPQAFKNISPAIVNELITLTKESAIVTVIGLGDVMRRAYQAGAATYNY 186 Query: 187 -QPLIIYCELAFVY-LILTSFCYIIQIKIESS 216 +PLII + +V LILT ++ K++S+ Sbjct: 187 LEPLIIAGLIYYVLVLILTFIGKAVERKLKSN 218 >gi|261406265|ref|YP_003242506.1| polar amino acid ABC transporter inner membrane subunit [Paenibacillus sp. Y412MC10] gi|261282728|gb|ACX64699.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. Y412MC10] Length = 480 Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 64/184 (34%), Positives = 108/184 (58%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I TL I+ + I+G +A++R+ I+ + Y+ I RGTP+LVQLF+I Y Sbjct: 278 GIQFTLLISALGVFFGFILGLIVALMRMS-GVKILKFLATAYIEIIRGTPMLVQLFIIHY 336 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 L I F + I++L++N +AY++EI R+ I + +GQ +A+ ++G+T+ + +RHI Sbjct: 337 SLAAFDIKFSPIQSGILTLSINSAAYLAEIFRAGIQGVDRGQLEAARSLGMTKGKAMRHI 396 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + + +EF+ I+K +S+ S I + +I AQ + +T+ PL A +Y Sbjct: 397 ILPQALKGVLPAIGNEFVVIIKESSIVSFIGVFDIMYQAQILRGSTFAPLNPLLVAAMIY 456 Query: 200 LILT 203 ILT Sbjct: 457 FILT 460 >gi|116629029|ref|YP_814201.1| ABC-type amino acid transport system, permease component [Lactobacillus gasseri ATCC 33323] gi|300362321|ref|ZP_07058497.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] gi|116094611|gb|ABJ59763.1| amino acid ABC transporter membrane protein, PAAT family [Lactobacillus gasseri ATCC 33323] gi|300353312|gb|EFJ69184.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] Length = 217 Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 116/201 (57%), Gaps = 3/201 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E N I P L A + T+ I + V+S+ +G +A + + ++ I+ FYVW Sbjct: 3 EVLNYIFSILPSLFSGAWL-TIEIFFWTTVVSIPLGLLVA-FGLHSNLKLVKAILKFYVW 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I RGTPLL+QL IFYGLP +GIVF + A +++ +N++AY +EI R + ++P GQ++ Sbjct: 61 IIRGTPLLLQLIFIFYGLPTVGIVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPVGQFE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +GL+R QTI I+ PQ + + +E I+++K +S+ I + ++ + A + + Sbjct: 121 AAQVLGLSRWQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYVIGLGDLLR-AGNVAT 179 Query: 184 TTYQPLIIYCELAFVYLILTS 204 L+ + VYL +T+ Sbjct: 180 ARDVSLVPLVLVGCVYLAMTA 200 >gi|315221701|ref|ZP_07863617.1| ABC transporter, permease protein [Streptococcus anginosus F0211] gi|315189188|gb|EFU22887.1| ABC transporter, permease protein [Streptococcus anginosus F0211] Length = 727 Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 128/225 (56%), Gaps = 20/225 (8%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIG-----FFIAVIRIFFSDTIISLIMH 59 W L+ +++ QLL + + +T+ +A +SF I+++IG F ++ ++ + +I Sbjct: 510 W-GLLQNNYKQLL-SGLGITIALALLSFAIAMVIGIIFGMFSVSPVKA------LRVISE 561 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 +V + RG PL++ IF+G+P++ + FVA I+L+LN AYI+EI+R Sbjct: 562 IFVDVIRGIPLMILAAFIFWGIPNLIESMTGHQSPINDFVAGTIALSLNAGAYIAEIVRG 621 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + Sbjct: 622 GIQAVPAGQMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLV 681 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 E+FQT + I++ YQ +Y LA YLI+ + + ++E + Sbjct: 682 ELFQTGKIIIARNYQSFKMYAILAVFYLIIITLLTRLAKRLEKRI 726 >gi|311280312|ref|YP_003942543.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] gi|308749507|gb|ADO49259.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] Length = 219 Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 126/220 (57%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P LL A +TL I+ + V LIIG R + I + I Sbjct: 1 MQFDW-SAIWPAIPILLEGA-KMTLWISVLGLVGGLIIGLVAGFARTY-GGWIANHIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEVIRGTPIVVQVMFIYFALPMALPDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R++TIRH+ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFSEAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A +YL++T + ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVIYLLITLVLSFVLRRLERRMK 217 >gi|308172227|ref|YP_003918932.1| amino acid ABC transporter permease [Bacillus amyloliquefaciens DSM 7] gi|307605091|emb|CBI41462.1| similar to amino acid ABC transporter (permease) [Bacillus amyloliquefaciens DSM 7] Length = 216 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 123/215 (57%), Gaps = 11/215 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHFYVWIFRG 67 +FP L+ A+ +TL +A + V ++I G +A+I RI ++ + Y+ FRG Sbjct: 3 SAFPALI-EALPITLVMAVAAMVFAVIGGLILALITKNRI----PVLHQLSKVYISFFRG 57 Query: 68 TPLLVQLFVIFYGLPHI--GI-VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 P LVQLF+I+YGLP + G+ + A II L+L +AY++EI R+++ S+ +GQ +A Sbjct: 58 VPTLVQLFLIYYGLPQLFPGMSKMTALTAAIIGLSLKNAAYLAEIFRAALNSVDEGQLEA 117 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++G+T+ Q R II PQ I + + FI +LK TS+A T+ + E+F + S Sbjct: 118 CLSVGMTKSQAYRRIIFPQAIRNALPATGNTFIGLLKETSLAFTLGVMEMFAQGKMYASG 177 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + Y +A +Y ILT ++Q +E ++++ Sbjct: 178 NLKYFETYLAVAIMYWILTIIYSVLQDLLERAISK 212 >gi|225868397|ref|YP_002744345.1| transport system membrane protein [Streptococcus equi subsp. zooepidemicus] gi|225701673|emb|CAW98991.1| transport system membrane protein [Streptococcus equi subsp. zooepidemicus] Length = 217 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 94/143 (65%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV I RG P++V LFV+++GLP+ G+ + + + +L +AYISE+ R+SI +I +G Sbjct: 57 YVSIMRGVPMIVVLFVLYFGLPYYGLELSALLCAYLGFSLVSAAYISEVFRASIDAIDQG 116 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A+GL ++H+ILPQ + PL + I ++KS+S+A+ IT+P+IFQ A+ Sbjct: 117 QWEAARALGLPYISIVKHVILPQAFRIAIPPLGNVVIDMVKSSSLAAMITVPDIFQKAKI 176 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I + + +Y +AF+Y ++ Sbjct: 177 IGGREWDYMSMYILVAFIYWVIA 199 >gi|312868037|ref|ZP_07728241.1| ABC transporter, permease protein [Streptococcus parasanguinis F0405] gi|311096441|gb|EFQ54681.1| ABC transporter, permease protein [Streptococcus parasanguinis F0405] Length = 520 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 73/230 (31%), Positives = 119/230 (51%), Gaps = 11/230 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTII 54 + ++ D+ PQ L +TL I+ + L+IG I V R + T Sbjct: 280 QMMKILKDNGPQFLRG-TGMTLLISMTGTIAGLVIGLLIGVFRTAPKAKNKFLAGCQTAF 338 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 ++ Y+ IFRGTP++VQ VIFYG I D A I +++N AY+SEI+R Sbjct: 339 GWFLNVYIEIFRGTPMIVQSMVIFYGSAQAFNISLDRTWAAIFIVSINTGAYMSEIVRGG 398 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I+++ GQ++A+ A+G+T QT+R ++LPQ + +EF+ +K TSV + I++ E Sbjct: 399 ILAVDPGQFEAATALGMTHGQTMRKVVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 ++ T + + YQ + +A +Y ILT I IE + TY+ Sbjct: 459 LYFTGNTVATQNYQYFPTFTIIAVIYFILTFTITRILRYIERRLDSDTYT 508 >gi|307265618|ref|ZP_07547172.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter wiegelii Rt8.B1] gi|326389622|ref|ZP_08211188.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter ethanolicus JW 200] gi|306919416|gb|EFN49636.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter wiegelii Rt8.B1] gi|325994337|gb|EGD52763.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter ethanolicus JW 200] Length = 220 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 67/192 (34%), Positives = 115/192 (59%), Gaps = 1/192 (0%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + L + +++TL + ++ I +I+G +A+I++ S IS I YV I RGTPLL Sbjct: 10 KYSHLFVSGLLMTLKLTFLAVTIGVILGLIVALIKMS-SIKPISFIGASYVEIIRGTPLL 68 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 VQL +I+ GL GI +F A + +L +N +AY++EIIR+ I ++ GQ +A+ ++G+T Sbjct: 69 VQLLLIYNGLMQFGIDIPAFTAGVSALAINSAAYVAEIIRAGIQAVDPGQNEAARSLGMT 128 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 +R++I+PQ I L +EFI +LK +++ S I ++ + A I S TY+ Sbjct: 129 HAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIVSVIGFADLTRQADIIQSITYKYFEP 188 Query: 192 YCELAFVYLILT 203 Y +A +Y ++T Sbjct: 189 YIIIAAIYFVMT 200 >gi|167760761|ref|ZP_02432888.1| hypothetical protein CLOSCI_03146 [Clostridium scindens ATCC 35704] gi|167661648|gb|EDS05778.1| hypothetical protein CLOSCI_03146 [Clostridium scindens ATCC 35704] Length = 221 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 119/212 (56%), Gaps = 8/212 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + + A+ VTL + ISF ++L++ IA++ +F I+ I YV FRGTPL+ QL Sbjct: 11 EAMMKALPVTLSLTGISFTLALVLAILIAIVE-YFKVPILDRIFSLYVSFFRGTPLIPQL 69 Query: 75 FVIFYGLPHIGIVFDSFVA---IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 F++++G+P + A ++ LTLN +AY+ E++R S++S+P+GQ +A+ A G++ Sbjct: 70 FLLYFGIPTFVPALRNVSAYSVCVVGLTLNSAAYMKEVVRGSLLSVPEGQKEAALAHGMS 129 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 QT+ I+LPQ + L + + I+K TS+A TI + EI A + T+ Sbjct: 130 SMQTMFRIVLPQAARVAIPSLFNNLVDIVKGTSMAFTIGVIEITAAANLRAAVTFNYFEA 189 Query: 192 YCELAFVY----LILTSFCYIIQIKIESSVTQ 219 Y L +Y LIL F +I+ E + T+ Sbjct: 190 YMVLMLLYWVIILILERFETVIEKYFEKTRTR 221 >gi|311111176|ref|ZP_07712573.1| amino acid ABC transporter, permease protein [Lactobacillus gasseri MV-22] gi|311066330|gb|EFQ46670.1| amino acid ABC transporter, permease protein [Lactobacillus gasseri MV-22] Length = 217 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 116/201 (57%), Gaps = 3/201 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E N I P L A + T+ I + V+S+ +G +A + + ++ I+ FYVW Sbjct: 3 EVLNYIFSILPSLFSGAWL-TIEIFFWTTVVSIPLGLLVA-FGLHSNLKLVKAILKFYVW 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I RGTPLL+QL IFYGLP +GIVF + A +++ +N++AY +EI R + ++P GQ++ Sbjct: 61 IIRGTPLLLQLIFIFYGLPTVGIVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPVGQFE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +GL+R QTI I+ PQ + + +E I+++K +S+ I + ++ + A + + Sbjct: 121 AAQVLGLSRWQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYVIGLGDLLR-AGNVAT 179 Query: 184 TTYQPLIIYCELAFVYLILTS 204 L+ + VYL +T+ Sbjct: 180 ARDVSLVPLVLVGCVYLAMTA 200 >gi|218672038|ref|ZP_03521707.1| nopaline ABC transporter, permease protein [Rhizobium etli GR56] Length = 242 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 118/201 (58%), Gaps = 14/201 (6%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + P+ L +V+T F +S+ + F A + S +++ Y + FRGTPLL Sbjct: 5 TLPRGLLLTLVLTFASLAAGFAVSVPLAFLRASSNPWASAPVLA-----YTYAFRGTPLL 59 Query: 72 VQLFVIFYGLPHIGIVFDSFVAII---------ISLTLNFSAYISEIIRSSIISIPKGQW 122 VQLF+I+YG+ + +V SF+ + I+ TLN +A+ +E++R I ++P+GQ Sbjct: 60 VQLFLIYYGIGQLPLVRQSFLWAVMREPFWCAFIAFTLNSAAHTTEVLRGGIQAVPRGQI 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A+GL+R T R I+ P T+ + ++E + +LK++S+ASTIT+ E+ A+++V Sbjct: 120 EAAKALGLSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTITLLEVTGLARQLV 179 Query: 183 STTYQPLIIYCELAFVYLILT 203 S T+ P ++ YL+LT Sbjct: 180 SETFAPYEVFIAAGAFYLLLT 200 >gi|220903865|ref|YP_002479177.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868164|gb|ACL48499.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 266 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 110/184 (59%), Gaps = 2/184 (1%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +++T I +S ++ +G + RI ++ +I+LI YV + RG PLLVQ+F I+Y Sbjct: 65 GVLITFKITVLSICCAVPLGLLTGLGRIS-NNRLINLIASTYVEVIRGIPLLVQIFYIYY 123 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 L + + +++++ + AY+ E+ R+ I +I KGQ +A+ ++G QT+R++ Sbjct: 124 ALSRF-VQVSGVTSAVVAISFCYGAYMGEVFRAGITAINKGQSEAARSLGFNGFQTMRYV 182 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + T P+ +E I++LK TS+ S + +P+I Q A+ V TTY Y +A +Y Sbjct: 183 VLPQAMRTILPPVGNECIAMLKDTSLVSIMAVPDIMQRARSFVGTTYLYFETYTVVALLY 242 Query: 200 LILT 203 L++T Sbjct: 243 LVIT 246 >gi|190894163|ref|YP_001984457.1| nopaline ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|190699824|gb|ACE93907.1| nopaline ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 249 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 118/201 (58%), Gaps = 14/201 (6%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + P+ L +V+T F +S+ + F A + S +++ Y + FRGTPLL Sbjct: 12 TLPRGLLLTLVLTFASLAAGFAVSVPLAFLRASSNPWASAPVLA-----YTYAFRGTPLL 66 Query: 72 VQLFVIFYGLPHIGIVFDSFVAII---------ISLTLNFSAYISEIIRSSIISIPKGQW 122 VQLF+I+YG+ + +V SF+ + I+ TLN +A+ +E++R I ++P+GQ Sbjct: 67 VQLFLIYYGIGQLPLVRQSFLWAVMREPFWCAFIAFTLNSAAHTTEVLRGGIQAVPRGQI 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A+GL+R T R I+ P T+ + ++E + +LK++S+ASTIT+ E+ A+++V Sbjct: 127 EAAKALGLSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTITLLEVTGLARQLV 186 Query: 183 STTYQPLIIYCELAFVYLILT 203 S T+ P ++ YL+LT Sbjct: 187 SETFAPYEVFIAAGAFYLLLT 207 >gi|56808255|ref|ZP_00366025.1| COG0765: ABC-type amino acid transport system, permease component [Streptococcus pyogenes M49 591] Length = 210 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 95/147 (64%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +I ++ Y+ I RG P++V LFV+++GLP+ G+ + + + ++ +AYISE+ RS Sbjct: 43 LIHYLVRAYISIMRGVPMIVVLFVLYFGLPYYGLELPALLCAYLGFSMVSAAYISEVFRS 102 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 SI +I KGQW+A+ A+GL ++ IILPQ + PL + I ++KS+S+A+ IT+P Sbjct: 103 SIEAIDKGQWEAAKALGLPYALMVKKIILPQVFRIAVPPLGNVIIDMVKSSSLAAMITVP 162 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVY 199 +IFQ A+ I + + +Y +AF+Y Sbjct: 163 DIFQNAKIIGGREWDYMSMYILVAFIY 189 >gi|306841172|ref|ZP_07473888.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] gi|306845330|ref|ZP_07477905.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] gi|306274246|gb|EFM56058.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] gi|306288798|gb|EFM60116.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] Length = 215 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 70/197 (35%), Positives = 118/197 (59%), Gaps = 8/197 (4%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFI---AVIRIFFSDTIISLIMHFYVWIFR 66 +DSF L +AA TL I+ + + L+IG + A+ R+ + + +L + F R Sbjct: 8 LDSFGPLFWAA-RYTLLISVLGIALGLVIGALVCAAALSRVAWLRRLAALWVSF----LR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G PLLVQL + +Y LP IGI + VA ++++ + SAYISEI R +I+++PKGQ +A+ Sbjct: 63 GVPLLVQLLLFYYLLPVIGIDVPALVAAVVTVGICASAYISEIWRGAIVALPKGQSEAAT 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 AIG+ + ++LPQ T S L +E I ++K++S+ S + I E+ + +Q + T+ Sbjct: 123 AIGMGPRDIWVRVVLPQAFTMSLPALVNELILLVKASSLVSVVGILELTRASQAQAAMTF 182 Query: 187 QPLIIYCELAFVYLILT 203 +PL +Y A +YL++ Sbjct: 183 RPLEVYLAAACIYLLIN 199 >gi|197337095|ref|YP_002157986.1| amino acid ABC transporter permease protein [Vibrio fischeri MJ11] gi|197314347|gb|ACH63796.1| amino acid ABC transporter permease protein [Vibrio fischeri MJ11] Length = 264 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 122/193 (63%), Gaps = 6/193 (3%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS-LIMHFYVWIFRGTPLL 71 FP L ++VTL I+ IS + +L I A++R+ S++I+ I Y+ + R TPLL Sbjct: 58 FPAELIEGLLVTLKISAISAIATLTIALITALLRL--SNSIVGKTISTLYIELIRNTPLL 115 Query: 72 VQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 VQ++++++ P +G+ D F +++L L AY +EI+RS +I++PKGQ++A +GL Sbjct: 116 VQIYLLYFVFGPFLGL--DRFTTAVLALALFQGAYTAEILRSGLINLPKGQFEACKTLGL 173 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 ++ + R+++LPQ I + L++E +S++K++S+ S + I ++ + IVS T P Sbjct: 174 SQFNSYRYVVLPQVIRKTLPSLTNELVSLVKNSSIVSVMAIFDLTTEGRNIVSDTAMPFE 233 Query: 191 IYCELAFVYLILT 203 I+ +A +YL++T Sbjct: 234 IWFTVAAIYLMIT 246 >gi|327194766|gb|EGE61608.1| nopaline ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 247 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 118/201 (58%), Gaps = 14/201 (6%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + P+ L +V+T F +S+ + F A + S +++ Y + FRGTPLL Sbjct: 10 TLPRGLLLTLVLTFASLAAGFAVSVPLAFLRASSNPWASAPVLA-----YTYAFRGTPLL 64 Query: 72 VQLFVIFYGLPHIGIVFDSFVAII---------ISLTLNFSAYISEIIRSSIISIPKGQW 122 VQLF+I+YG+ + +V SF+ + I+ TLN +A+ +E++R I ++P+GQ Sbjct: 65 VQLFLIYYGIGQLPLVRQSFLWAVMREPFWCAFIAFTLNSAAHTTEVLRGGIQAVPRGQI 124 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A+GL+R T R I+ P T+ + ++E + +LK++S+ASTIT+ E+ A+++V Sbjct: 125 EAAKALGLSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTITLLEVTGLARQLV 184 Query: 183 STTYQPLIIYCELAFVYLILT 203 S T+ P ++ YL+LT Sbjct: 185 SETFAPYEVFIAAGAFYLLLT 205 >gi|322376796|ref|ZP_08051289.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. M334] gi|321282603|gb|EFX59610.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. M334] Length = 721 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 129/222 (58%), Gaps = 14/222 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYV 62 W L+ +++ QLL + + +TL +A ISF I+++IG + + + S +IS I +V Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEI---FV 558 Query: 63 WIFRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSII 115 + RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I Sbjct: 559 DVIRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQ 618 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+F Sbjct: 619 AVPVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELF 678 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 QT + I++ YQ +Y LA YL++ + + ++E + Sbjct: 679 QTGKIIIARNYQSFKMYAILAIFYLVIITLLTKLAKRLEKRI 720 >gi|20804071|emb|CAD31274.1| PUTATIVE AMINO-ACID ABC TRANSPORTER PERMEASE PROTEIN [Mesorhizobium loti R7A] Length = 293 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 125/213 (58%), Gaps = 5/213 (2%) Query: 6 FNL----IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 FNL I + P L+ +V T+ ++ +S + + II A+ ++ S+ + FY Sbjct: 73 FNLNMPFIWEHLPYLITQGVVTTIYVSAVSLIFASIIAMIAAIAKLS-SNGFAYALASFY 131 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 FRG PLL+Q+++I+ GLP +GIV ++ + I++L+L AY++EI R+ I SI +GQ Sbjct: 132 TSFFRGLPLLIQIYLIYLGLPQLGIVINAVPSGILALSLCVGAYMTEIFRAGIQSIDRGQ 191 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+AS +IG TIR IILPQ + P+ + FI++LK +S+ S + + E+ A+ I Sbjct: 192 WEASRSIGFGFGLTIRKIILPQALPVIIPPMGNTFIAMLKDSSLVSVLGVWELTFLARTI 251 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 T+ + + A +Y IL++ ++Q ++E Sbjct: 252 GQPTFHHMEMLITAAMIYWILSACLEVLQSRLE 284 >gi|289168045|ref|YP_003446314.1| ABC transporter membrane spanning permease-glutamine transport [Streptococcus mitis B6] gi|288907612|emb|CBJ22449.1| ABC transporter membrane spanning permease-glutamine transport [Streptococcus mitis B6] Length = 721 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 129/222 (58%), Gaps = 14/222 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYV 62 W L+ +++ QLL + + +TL +A ISF I+++IG + + + S +IS I +V Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEI---FV 558 Query: 63 WIFRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSII 115 + RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I Sbjct: 559 DVIRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQ 618 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+F Sbjct: 619 AVPVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELF 678 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 QT + I++ YQ +Y LA YL++ + + ++E + Sbjct: 679 QTGKIIIARNYQSFKMYAILAIFYLVIITLLTKLAKRLEKRI 720 >gi|332297266|ref|YP_004439188.1| polar amino acid ABC transporter, inner membrane subunit [Treponema brennaborense DSM 12168] gi|332180369|gb|AEE16057.1| polar amino acid ABC transporter, inner membrane subunit [Treponema brennaborense DSM 12168] Length = 230 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 15/211 (7%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ I+ + G +A+ RI + + + YV RGTPLLVQLF+I+YGL Sbjct: 20 TILLSLIAVALGTCFGMLLAMCRIS-KNRGLRFLGTAYVEFIRGTPLLVQLFIIYYGLQA 78 Query: 84 IGIVF--------------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 IGI F F++ +I++ +N +AY+ EI RS I S+ KGQ +A ++G Sbjct: 79 IGIRFPDVPFMTALLGINFSDFMSGVITMGMNSAAYVCEIFRSGIQSVDKGQTEAGRSLG 138 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+ +T+ HII+PQ + L +EF+ ++K +S+ S I I ++ A + T+QP Sbjct: 139 LSYPRTLAHIIIPQAVRNVLPALGNEFVVVIKESSIVSIIGIADLMYKANTVRGNTFQPF 198 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 A VY ++T + +IE + H Sbjct: 199 EPLLVAAVVYFLMTFPLSKLLARIEKRMRSH 229 >gi|293605338|ref|ZP_06687723.1| amino acid ABC superfamily ATP binding cassette transporter [Achromobacter piechaudii ATCC 43553] gi|292816277|gb|EFF75373.1| amino acid ABC superfamily ATP binding cassette transporter [Achromobacter piechaudii ATCC 43553] Length = 217 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 113/184 (61%), Gaps = 5/184 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + I+ +++ +G +A+ RI ++S +++ Y+W+ RGTPL++Q+ I++ LP Sbjct: 17 VTLTLFFITLALAVPLGLVLALARIS-KWPLLSNLVNGYIWLMRGTPLMLQMLFIYFALP 75 Query: 83 HI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + G+ F A +++ LN++AY +EI R+ I S+ +GQ++ S +G+T QT+R I Sbjct: 76 FVPVVGVRLPDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEGSKVLGMTYLQTLRRI 135 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + P+S+E I+++K TS+ + + +I +TA+ IV + AF Y Sbjct: 136 VLPQMVQRVLPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAAAF-Y 194 Query: 200 LILT 203 L++T Sbjct: 195 LLMT 198 >gi|229095070|ref|ZP_04226066.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-29] gi|229101172|ref|ZP_04231938.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-28] gi|229114024|ref|ZP_04243450.1| Amino acid ABC transproter, permease [Bacillus cereus Rock1-3] gi|228669483|gb|EEL24899.1| Amino acid ABC transproter, permease [Bacillus cereus Rock1-3] gi|228682300|gb|EEL36411.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-28] gi|228688400|gb|EEL42282.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-29] Length = 230 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/188 (35%), Positives = 113/188 (60%), Gaps = 3/188 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + I ++P LL A IV TL + S V+ +IG A RI ++ +++ I H Y+ I Sbjct: 2 FEIFISTYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-NNKVLNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I ++ Sbjct: 119 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAASN 178 Query: 186 YQPLIIYC 193 +Q L Y Sbjct: 179 FQQLDTYV 186 >gi|205375465|ref|ZP_03228253.1| amino acid ABC transporter ATP-binding protein [Bacillus coahuilensis m4-4] Length = 216 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 125/216 (57%), Gaps = 6/216 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +F +D+F L + T + +S +I+L+IG F A+++I + I + Y++ Sbjct: 3 HFFQEFVDTFDIFL-KGMGWTFLVTFVSVLIALVIGLFFAILKIS-GIKALEWIANTYIF 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPL+ Q+F+ ++GL + I F ++ + L + AYI+EI+R SI SI KGQ + Sbjct: 61 VVRGTPLIAQIFIFYFGLASLNI--SDFWSVAMGLAFHNGAYIAEILRGSIQSIDKGQRE 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A ++G+++ T+R IILPQ + PL ++FI LK +S+AS I + E+F A + S Sbjct: 119 AGRSLGMSQGLTMRRIILPQAFRRALPPLGNQFIIALKDSSLASFIGMYELFNVATTLGS 178 Query: 184 TTYQPLIIYCELAFVYLILTS-FCYIIQIKIESSVT 218 + + ++ YL+L F +I+Q ++E ++ Sbjct: 179 NNFDNMTYLLIVSVYYLVLVYLFTFIVQ-RLEKRMS 213 >gi|170724087|ref|YP_001751775.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169762090|gb|ACA75406.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 229 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 124/207 (59%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +II P+L A +TL + I+ V LI+ + + R + +L Y++ F Sbjct: 3 WEVIIKWLPRLAQGA-TLTLELVAIAVVAGLILAIPLGIARSSRHWYVRALPFS-YIFFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+++YGL V D F ++++TL+ +AYI+EI+R ++ S Sbjct: 61 RGTPLLVQLFLVYYGLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQS 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKG+ +A+ A+G++R +T+ +I+LP+ S+E I +LK++++AST+T+ E+ Sbjct: 121 IPKGEIEAARALGMSRGKTLFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I++ TY P+ I+ YL+++ Sbjct: 181 MARTIIARTYLPVEIFFAAGVFYLVIS 207 >gi|225870779|ref|YP_002746726.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. equi 4047] gi|225700183|emb|CAW94346.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. equi 4047] Length = 721 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 110/192 (57%), Gaps = 8/192 (4%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI----- 84 ISF I+L+IG ++ + S + + +V + RG PL++ IF+G+P++ Sbjct: 527 ISFAIALVIGIVFGMMAVSPSKNL-RMASTIFVDVVRGIPLMIVAAFIFWGVPNLIESMT 585 Query: 85 --GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + FVA I+L+LN AYI+EI+R I ++P GQ +AS ++GL+ T+R IILP Sbjct: 586 GHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYHTTMRRIILP 645 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q I ++F+ LK T++ S I + E+FQT + I++ YQ +Y LA +YLI+ Sbjct: 646 QAIKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAVIYLIM 705 Query: 203 TSFCYIIQIKIE 214 + + ++E Sbjct: 706 ITLLTRLAKRLE 717 >gi|186473899|ref|YP_001861241.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184196231|gb|ACC74195.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 220 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 11/202 (5%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q + A +V TL I L++GF IAV+++F + + + Y+ +FRGTP LVQL Sbjct: 14 QPIAAGLVTTLGTWVAGVAIGLLVGFLIAVLQLFCGRWVRGM-LRVYIELFRGTPFLVQL 72 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F+++YG P IGI + A ++ L L SAY +E RS SIP+G +A+ +GLTR Q Sbjct: 73 FLLYYGGPSIGITLEPLTAGVLGLGLYGSAYFAEAFRSGFQSIPRGHLEAASCLGLTRWQ 132 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + I +PQ + L++ I + K T+V S +T+PE+ I S T+ Sbjct: 133 AVLRIQVPQMLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATF-------- 184 Query: 195 LAFVY-LILTSFCYIIQIKIES 215 AFV L++ CY+ +++ S Sbjct: 185 -AFVETLLMLCVCYLALVELTS 205 >gi|323127407|gb|ADX24704.1| cystine transport system permease protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 216 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 55/139 (39%), Positives = 91/139 (65%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ I RG P++V LFV+++GLP+ G+ + + + ++ +AYISE+ RSSI +I KG Sbjct: 57 YISIMRGVPMIVVLFVLYFGLPYYGLELPALLCAYLGFSMVSAAYISEVFRSSIEAIDKG 116 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A+GL ++ IILPQ + PL + I ++KS+S+A+ IT+P+IFQ A+ Sbjct: 117 QWEAAKALGLPYSLMVKKIILPQAFRIAVPPLGNVIIDMVKSSSLAAMITVPDIFQNAKI 176 Query: 181 IVSTTYQPLIIYCELAFVY 199 I + + +Y +AF+Y Sbjct: 177 IGGREWDYMSMYILVAFIY 195 >gi|307706697|ref|ZP_07643503.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] gi|307617941|gb|EFN97102.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] Length = 721 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 129/222 (58%), Gaps = 14/222 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYV 62 W L+ +++ QLL + + +TL +A ISF I+++IG + + + S +IS I +V Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEI---FV 558 Query: 63 WIFRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSII 115 + RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I Sbjct: 559 DVIRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQ 618 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+F Sbjct: 619 AVPVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELF 678 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 QT + I++ YQ +Y LA YL++ + + ++E + Sbjct: 679 QTGKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|115360320|ref|YP_777457.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria AMMD] gi|115285648|gb|ABI91123.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia ambifaria AMMD] Length = 218 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/193 (33%), Positives = 115/193 (59%), Gaps = 4/193 (2%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVW 63 +F ++ P LL A VVT+ I SFV+S ++G +A++R+ SD ++S ++ Sbjct: 2 FFQNAVEFLPILLKGA-VVTIEITFCSFVLSTVLGLLLALMRV--SDNRVLSNTAATFIN 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RG P++VQLF I++ LP +G+ +F A I L + +S Y +E R+ I +I GQ + Sbjct: 59 VIRGLPIIVQLFYIYFVLPDLGVQLSAFQAGFIGLGIAYSVYQAENFRAGIQAIDHGQIE 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+ +R ++LPQ + P + + +LK +S+ASTIT+ E+ + Q I S Sbjct: 119 AAQSIGMRGTMIMRRVVLPQAFRIALPPYGNTLVMMLKDSSLASTITVAEMTRAGQLIAS 178 Query: 184 TTYQPLIIYCELA 196 +T+Q + ++ +A Sbjct: 179 STFQNMTVFTLVA 191 >gi|291459896|ref|ZP_06599286.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Oribacterium sp. oral taxon 078 str. F0262] gi|291417237|gb|EFE90956.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Oribacterium sp. oral taxon 078 str. F0262] Length = 228 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 112/208 (53%), Gaps = 5/208 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHFYVWIFRGTPLLV 72 L+ ++ T+ I + +I + +G IA+IR T I Y+ + RGTP ++ Sbjct: 20 LFGGLLNTMTITVFALLIGVALGLLIAIIRTTADRTGKWRIPDFFCRIYLTVIRGTPTMI 79 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QL +IFY +G F I+ LN +AY++EIIRS I+SIP GQ +A ++G Sbjct: 80 QL-MIFYYCIFVGRFFSGVFVASIAFGLNSAAYVAEIIRSGILSIPAGQMEAGRSLGFNY 138 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +T+R+II+PQ + +EFI ++K T+VA +++ ++ + A I + TY + Sbjct: 139 VETMRYIIMPQAFKNVLPAIFNEFIVLIKETAVAGYVSVRDLTKGADNIRAQTYDAWLPL 198 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQH 220 +YLILT F ++ K+E + Q Sbjct: 199 LAAGLIYLILTMFFTTLEKKLERRLKQG 226 >gi|225025465|ref|ZP_03714657.1| hypothetical protein EIKCOROL_02363 [Eikenella corrodens ATCC 23834] gi|224941749|gb|EEG22958.1| hypothetical protein EIKCOROL_02363 [Eikenella corrodens ATCC 23834] Length = 229 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 61/187 (32%), Positives = 107/187 (57%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + +F + F A ++TL ++ S +SL++G +AVI + + Sbjct: 11 MNWSYFWRVAPKFAD----AALITLKLSAYSIALSLLLGLAVAVITAYRVRPLY-WPARA 65 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLL+QLF ++YGLP +GI +D F I++L ++Y+SE +R+ ++S+PKG Sbjct: 66 YIELSRNTPLLIQLFFLYYGLPKVGIKWDGFTCGILALVFLGASYMSEALRAGLLSVPKG 125 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ AIGL+R Q R ++LPQ S + + + ++K TSV S + + E+ + Sbjct: 126 QVEAAKAIGLSRWQVFRFVVLPQAWAVSVPAVGANVLFLIKETSVVSAVAVAELMFVTKD 185 Query: 181 IVSTTYQ 187 I+ Y+ Sbjct: 186 IIGMDYK 192 >gi|313667601|ref|YP_004047885.1| ABC transporter [Neisseria lactamica ST-640] gi|313005063|emb|CBN86495.1| putative ABC transporter [Neisseria lactamica 020-06] Length = 219 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 123/221 (55%), Gaps = 12/221 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-----IRIFFSDTIISLIMHFYVW 63 +ID+ P+ AA +TL ++ V+SL+ G +AV IR F++ + Y+ Sbjct: 6 LIDAVPKFADAA-KLTLELSVYGVVLSLLFGLPVAVVTAYRIRPFYA------LARAYIE 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + R TPLL+QLF ++YGLP +GI +D F +I+L ++Y++E +R+ I+++PKGQ + Sbjct: 59 LSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVIALVFLGASYMAEAVRAGILAVPKGQVE 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A AIGL+R Q R++ LPQ + +++ + ++K TSV S + I E+ + ++ Sbjct: 119 AGKAIGLSRFQVFRYVELPQAWAVAFPAVAANILFLMKETSVISAVGIAELLFVTKDVIG 178 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 Y+ L YLI+ ++ ++E+ + Y V Sbjct: 179 MDYKTNEALFLLFAAYLIILLPVSLLVRRLENRIRSAKYGV 219 >gi|307704942|ref|ZP_07641833.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus mitis SK597] gi|307621556|gb|EFO00602.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus mitis SK597] Length = 721 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 129/222 (58%), Gaps = 14/222 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYV 62 W L+ +++ QLL + + +TL +A ISF I+++IG + + + S +IS I +V Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEI---FV 558 Query: 63 WIFRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSII 115 + RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I Sbjct: 559 DVIRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQ 618 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+F Sbjct: 619 AVPVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELF 678 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 QT + I++ YQ +Y LA YL++ + + ++E + Sbjct: 679 QTGKIIIARNYQSFKMYAILAIFYLVIITLLTKLAKRLEKRI 720 >gi|152976559|ref|YP_001376076.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025311|gb|ABS23081.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cytotoxicus NVH 391-98] Length = 219 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 123/215 (57%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I +S +I I+G +A+ +I ++++ Y IF Sbjct: 5 FSAITPSIPYIL-KGLEVTLKIVAVSALIGFILGTLLALCKIA-RIRVLNVAADLYTSIF 62 Query: 66 RGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P IG +F+A +I+ +LN AY+SE+IR+ I +I KGQ +A Sbjct: 63 RGTPLVLQLMIIYFGVPQMIGYDIPAFLAAVIAFSLNSGAYMSEVIRAGIQAIDKGQTEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +RHIILPQ + L +EF ++ K ++V + I ++ + A + Sbjct: 123 AIALGVPYGKMMRHIILPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + VY IL ++ IE + + Sbjct: 183 TFKYLEPLLFVGLVYYILVIVLTVVGKAIEGRMKK 217 >gi|295699403|ref|YP_003607296.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1002] gi|295438616|gb|ADG17785.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 218 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 60/168 (35%), Positives = 100/168 (59%), Gaps = 6/168 (3%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I+ YV +F+GTPLL+QLF+ F+GLP IGI + A ++LTL SAY+ +I R + + Sbjct: 52 IVVLYVEVFQGTPLLMQLFLAFFGLPLIGIDVSPWAAATVTLTLYTSAYLVDIWRGCVEA 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQW A ++G+T Q +R+I+ PQ + + P + ++KST++AS I E+ + Sbjct: 112 VPRGQWAAGASLGMTFGQQLRYIVWPQALKIAVAPTVGFLVQVVKSTALASIIGFIELTK 171 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIESSVTQH 220 T I + ++P IY +A +Y LT + +++ + V QH Sbjct: 172 TGTMITNAAFRPFPIYGMVAMIYFAMCFPLTWYARVLEKR--QKVGQH 217 >gi|121534020|ref|ZP_01665846.1| polar amino acid ABC transporter, inner membrane subunit [Thermosinus carboxydivorans Nor1] gi|121307531|gb|EAX48447.1| polar amino acid ABC transporter, inner membrane subunit [Thermosinus carboxydivorans Nor1] Length = 217 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 51/130 (39%), Positives = 88/130 (67%), Gaps = 3/130 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 Y+W+ RGTPL++QL +++GLP +IG+ F A +++ LN++AY +EI R+ I SI Sbjct: 54 YIWLLRGTPLMLQLLFVYFGLPFIPYIGVRLPDFPAAVVAFVLNYAAYFAEIFRAGIQSI 113 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 +GQ++A+ A+G+T QT+R IILPQ + P+S+E I+++K TS+ + + ++ +T Sbjct: 114 DRGQYEAAKALGMTYVQTMRRIILPQVVKRVLPPVSNETITLVKDTSLIYVLAMNDLLRT 173 Query: 178 AQRIVSTTYQ 187 A+ IV + Sbjct: 174 ARSIVQRDFN 183 >gi|309379288|emb|CBX22061.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 219 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 123/221 (55%), Gaps = 12/221 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-----IRIFFSDTIISLIMHFYVW 63 +ID+ P+ AA +TL ++ V+SL+ G +AV IR F++ + Y+ Sbjct: 6 LIDAVPKFADAA-KLTLELSVYGVVLSLLFGLPVAVVTAYRIRPFYA------LARAYIE 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + R TPLL+QLF ++YGLP +GI +D F +I+L ++Y++E +R+ I+++PKGQ + Sbjct: 59 LSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVIALVFLGASYMAEAVRAGILAVPKGQVE 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A AIGL+R Q R++ LPQ + +++ + ++K TSV S + I E+ + ++ Sbjct: 119 AGKAIGLSRFQVFRYVELPQAWAVAFPAVAANILFLMKETSVISAVGIAELLFVTKDVIG 178 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 Y+ L YLI+ ++ ++E+ + Y V Sbjct: 179 MDYKTNEALFLLFAAYLIILLPVSLLVRRLENRIRGAKYGV 219 >gi|153836333|ref|ZP_01989000.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AQ3810] gi|149750235|gb|EDM60980.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AQ3810] Length = 265 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 123/193 (63%), Gaps = 6/193 (3%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII-SLIMHFYVWIFRGTPLL 71 +P L ++VTL I+ IS +L++G A++R+ SD+ + ++I YV + R TPLL Sbjct: 56 WPAELIDGLLVTLNISAISLFFTLVLGLVTALLRL--SDSKVGNVIGTTYVEVIRNTPLL 113 Query: 72 VQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 VQ++++++ P IG+ D F +++L+L AY +EI R+ + SIPKGQ++A+ +GL Sbjct: 114 VQIYLLYFVFGPVIGL--DRFSTAVLALSLFQGAYTAEIFRAGLNSIPKGQFEAAQTLGL 171 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + T + +ILPQ + + PL++E +S++K++S+ S + I ++ A+ IVS T P Sbjct: 172 SPFYTYKDVILPQVLQRTLPPLTNEVVSLIKNSSIVSVMAIFDLTTQARNIVSETAMPFE 231 Query: 191 IYCELAFVYLILT 203 I+ +A +YL LT Sbjct: 232 IWFTVAAIYLALT 244 >gi|169334791|ref|ZP_02861984.1| hypothetical protein ANASTE_01197 [Anaerofustis stercorihominis DSM 17244] gi|169257529|gb|EDS71495.1| hypothetical protein ANASTE_01197 [Anaerofustis stercorihominis DSM 17244] Length = 222 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 116/211 (54%), Gaps = 7/211 (3%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 LL + +T+ I IS +I+ +G F V+ I S I FY+W+ RGTPLLVQ F Sbjct: 13 LLLEGLAMTVQITIISLIIAFFLGLFSCVMGIS-SFKPFKAISKFYLWLIRGTPLLVQCF 71 Query: 76 VIFYGLPHI----GIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +++GLP + GI F ++ A II+L+LN AY+SEI R I ++ KGQ +A+ ++G Sbjct: 72 FVYFGLPQLIQSFGIDFRLTAYSAGIITLSLNAGAYMSEIFRGGIQAVDKGQMEAARSLG 131 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L + + + +ILPQ + L ++FI LK TS+ STI++ E+ A + T Sbjct: 132 LPKGRAMIKVILPQALKICIPSLVNQFIITLKDTSIISTISLAEVVYAANIYIGRTMNSF 191 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + + +YL++ + + IE ++ Sbjct: 192 ATWTLVGLMYLVVVTLLSSLSNYIERRISNE 222 >gi|52144757|ref|YP_082071.1| amino acid ABC transporter, permease [Bacillus cereus E33L] gi|51978226|gb|AAU19776.1| amino acid ABC transporter, permease [Bacillus cereus E33L] Length = 221 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/181 (39%), Positives = 111/181 (61%), Gaps = 2/181 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + I + P L +A++ TL IACI+ +ISL+I +I +FF I+ ++ YV + R Sbjct: 6 HFIKEQIPLFLDSALL-TLKIACIAIIISLLIASINGLI-LFFRIRILHKVIRAYVEVAR 63 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 TPLL+QLF +++GLP +GI +F ++++ Y++E+IRS + SI K Q ++ Y Sbjct: 64 NTPLLIQLFFLYFGLPSLGIKLSNFSIALLAMCFLGGGYMTEVIRSGLNSISKSQVESGY 123 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 AIGL + Q R IILPQ T SA L + FI +LK TS+ S I +PE+ T ++S Y Sbjct: 124 AIGLNKWQLFRFIILPQAATISAPALFANFIFLLKETSIVSAIAVPELLYTTTNLISIYY 183 Query: 187 Q 187 + Sbjct: 184 K 184 >gi|19745969|ref|NP_607105.1| ABC transporter permease [Streptococcus pyogenes MGAS8232] gi|19748129|gb|AAL97604.1| putative ABC transporter (permease) [Streptococcus pyogenes MGAS8232] Length = 216 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 55/139 (39%), Positives = 91/139 (65%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ I RG P++V LFV+++GLP+ G+ + + + ++ +AYISE+ RSSI +I KG Sbjct: 57 YISIMRGVPMIVVLFVLYFGLPYYGLELPALLCAYLGFSMVSAAYISEVFRSSIEAIDKG 116 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A+GL ++ IILPQ + PL + I ++KS+S+A+ IT+P+IFQ A+ Sbjct: 117 QWEAAKALGLPYALMVKKIILPQAFRIAVPPLGNVIIDMVKSSSLAAMITVPDIFQNAKI 176 Query: 181 IVSTTYQPLIIYCELAFVY 199 I + + +Y +AF+Y Sbjct: 177 IGGREWDYMSMYILVAFIY 195 >gi|148985136|ref|ZP_01818375.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP3-BS71] gi|148998673|ref|ZP_01826112.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP11-BS70] gi|149019232|ref|ZP_01834594.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP23-BS72] gi|168486561|ref|ZP_02711069.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC1087-00] gi|168575696|ref|ZP_02721611.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae MLV-016] gi|221231935|ref|YP_002511087.1| glutamine ABC transporter,glutamine-binding protein/permease protein [Streptococcus pneumoniae ATCC 700669] gi|225854706|ref|YP_002736218.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae JJA] gi|225860926|ref|YP_002742435.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae Taiwan19F-14] gi|298229894|ref|ZP_06963575.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298502762|ref|YP_003724702.1| amino acid ABC superfamily transporter ATP-binding protein/permease [Streptococcus pneumoniae TCH8431/19A] gi|307067889|ref|YP_003876855.1| amino acid ABC transporter/signal transduction system periplasmic domain-containing protein [Streptococcus pneumoniae AP200] gi|147755510|gb|EDK62558.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP11-BS70] gi|147922581|gb|EDK73699.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP3-BS71] gi|147931102|gb|EDK82081.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP23-BS72] gi|183570457|gb|EDT90985.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC1087-00] gi|183578152|gb|EDT98680.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae MLV-016] gi|220674395|emb|CAR68945.1| putative glutamine ABC transporter,glutamine-binding protein/permease protein [Streptococcus pneumoniae ATCC 700669] gi|225723631|gb|ACO19484.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae JJA] gi|225727804|gb|ACO23655.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae Taiwan19F-14] gi|298238357|gb|ADI69488.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein/permease protein [Streptococcus pneumoniae TCH8431/19A] gi|301794323|emb|CBW36748.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae INV104] gi|301800161|emb|CBW32766.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae OXC141] gi|306409426|gb|ADM84853.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Streptococcus pneumoniae AP200] gi|327389476|gb|EGE87821.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA04375] gi|332200688|gb|EGJ14760.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA41317] gi|332203089|gb|EGJ17157.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA47901] Length = 721 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 129/222 (58%), Gaps = 14/222 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYV 62 W L+ +++ QLL + + +TL +A ISF I+++IG + + + S +IS I +V Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEI---FV 558 Query: 63 WIFRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSII 115 + RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I Sbjct: 559 DVIRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQ 618 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+F Sbjct: 619 AVPVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELF 678 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 QT + I++ YQ +Y LA YL++ + + ++E + Sbjct: 679 QTGKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|126665670|ref|ZP_01736651.1| ABC-type arginine/histidine transport system, permease component [Marinobacter sp. ELB17] gi|126629604|gb|EBA00221.1| ABC-type arginine/histidine transport system, permease component [Marinobacter sp. ELB17] Length = 240 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 124/217 (57%), Gaps = 10/217 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + +V T+ + +S +I L+I +A++R + +S + Y ++FRGTPLL+QL++I Sbjct: 24 WNGLVTTVQLVFLSLLIGLVIALPLAILRTV-RNPFVSGPIWVYTYLFRGTPLLIQLYII 82 Query: 78 FYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +YG+ I I + F +++ TLN +AY +EIIR +II+ P G+ +A+ A Sbjct: 83 YYGIAQIPGIQETFWWNIFREPFYPALLAFTLNTAAYTTEIIRGAIIATPMGEIEAAKAY 142 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G++ +R IILP + S+E I +L ++++AS +T+ ++ A+ I + TY P Sbjct: 143 GMSWMLRMRRIILPNAARRAVQAYSNEVIFMLHASAIASVVTMVDLTGAARNIYARTYAP 202 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + +A +YL+LT + K+E+ + +H ++ Sbjct: 203 FDAFIFVALIYLMLTFILVFVFRKLENHLLRHQRPMN 239 >gi|307257777|ref|ZP_07539534.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863683|gb|EFM95609.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 219 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 107/179 (59%), Gaps = 2/179 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++++ P+ + AAI+ TL ++ ++SL+ G IA++ + L Y+ + R T Sbjct: 6 VVNAIPRFIDAAII-TLQLSFWGILLSLVFGLLIAIVTAYQVKPFYGL-ARGYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF ++YGLP IGI +D F +I+L ++Y++E +R+ ++++PKGQ +A+ AI Sbjct: 64 PLLIQLFFLYYGLPKIGIKWDGFTCGVIALVFLGASYMAEALRAGLLAVPKGQTEAAKAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GL R Q R++I PQ S + + + ++K TSV S + + E+ + I+ Y+ Sbjct: 124 GLNRFQVFRYVIFPQAWAVSIPAIGANVLFLIKETSVISAVAVAELMFVTKDIIGMDYK 182 >gi|104784003|ref|YP_610501.1| amino acid ABC transporter permease [Pseudomonas entomophila L48] gi|95112990|emb|CAK17718.1| putative amino acid ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 320 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 69/198 (34%), Positives = 117/198 (59%), Gaps = 6/198 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ IS + L+IG F + R+ + T+ L YV + RGTPLLVQ+F+ ++ Sbjct: 125 TLWISVISGALGLVIGLFAGLCRLSNNPTLRDLST-VYVELVRGTPLLVQIFIFYF---F 180 Query: 84 IGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IG V + A + +L L AY++EI+R+ + SI KGQ +A+ ++GL Q++RH+IL Sbjct: 181 IGTVLNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNGSQSMRHVIL 240 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ PL+ +FIS++K TS+ S I I E+ ++ + ++T++ I+ +A +YL+ Sbjct: 241 PQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWFCVAGLYLL 300 Query: 202 LTSFCYIIQIKIESSVTQ 219 + I ++E + Q Sbjct: 301 INLPLSHIASRLERRLAQ 318 >gi|149002609|ref|ZP_01827541.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP14-BS69] gi|147759220|gb|EDK66213.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP14-BS69] Length = 492 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 126/220 (57%), Gaps = 10/220 (4%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+ +++ QLL + + +TL +A ISF I+++IG + + ++ +I +V + Sbjct: 275 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSL-RVISEIFVDV 331 Query: 65 FRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 RG PL++ IF+G+P+ + FVA I+L+LN +AYI+EI+R I ++ Sbjct: 332 IRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQAV 391 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+FQT Sbjct: 392 PVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQT 451 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + I++ YQ +Y LA YL++ + + ++E + Sbjct: 452 GKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 491 >gi|15901102|ref|NP_345706.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae TIGR4] gi|111658436|ref|ZP_01409115.1| hypothetical protein SpneT_02000407 [Streptococcus pneumoniae TIGR4] gi|116516932|ref|YP_816569.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae D39] gi|149007101|ref|ZP_01830770.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP18-BS74] gi|149012291|ref|ZP_01833360.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP19-BS75] gi|168493162|ref|ZP_02717305.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC3059-06] gi|225856907|ref|YP_002738418.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae P1031] gi|225859035|ref|YP_002740545.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae 70585] gi|237649941|ref|ZP_04524193.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CCRI 1974] gi|307127172|ref|YP_003879203.1| amino acid ABC transporter amino acid-binding protein/permeae [Streptococcus pneumoniae 670-6B] gi|14972722|gb|AAK75346.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae TIGR4] gi|116077508|gb|ABJ55228.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae D39] gi|147761405|gb|EDK68371.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP18-BS74] gi|147763617|gb|EDK70552.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP19-BS75] gi|183576805|gb|EDT97333.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC3059-06] gi|225721475|gb|ACO17329.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae 70585] gi|225725249|gb|ACO21101.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae P1031] gi|306484234|gb|ADM91103.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae 670-6B] gi|332074571|gb|EGI85045.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17545] Length = 721 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 129/222 (58%), Gaps = 14/222 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYV 62 W L+ +++ QLL + + +TL +A ISF I+++IG + + + S +IS I +V Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEI---FV 558 Query: 63 WIFRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSII 115 + RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I Sbjct: 559 DVIRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQ 618 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+F Sbjct: 619 AVPVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELF 678 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 QT + I++ YQ +Y LA YL++ + + ++E + Sbjct: 679 QTGKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|296313423|ref|ZP_06863364.1| amino acid ABC transporter, permease protein [Neisseria polysaccharea ATCC 43768] gi|296840055|gb|EFH23993.1| amino acid ABC transporter, permease protein [Neisseria polysaccharea ATCC 43768] Length = 219 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 123/221 (55%), Gaps = 12/221 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-----IRIFFSDTIISLIMHFYVW 63 +ID+ P+ AA +TL ++ V+SL+ G +AV IR F++ + Y+ Sbjct: 6 LIDAVPKFADAA-KLTLELSVYGVVLSLLFGLPVAVVTAYRIRPFYA------LARAYIE 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + R TPLL+QLF ++YGLP +GI +D F +I+L ++Y++E +R+ I+++PKGQ + Sbjct: 59 LSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVIALVFLGASYMAEAVRAGILAVPKGQVE 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GL+R Q R++ LPQ + +++ + ++K TSV S + I E+ + ++ Sbjct: 119 AGKAVGLSRFQVFRYVELPQAWAVAFPAVAANILFLMKETSVISAVGIAELLFVTKDVIG 178 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 Y+ L YLI+ ++ ++E+ + Y V Sbjct: 179 MDYKTNEALFLLFAAYLIILLPVSLLVRRLENRIRGAKYGV 219 >gi|194398103|ref|YP_002037841.1| ABC transporter amino acid-binding protein/permease [Streptococcus pneumoniae G54] gi|194357770|gb|ACF56218.1| ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae G54] Length = 721 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 129/222 (58%), Gaps = 14/222 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYV 62 W L+ +++ QLL + + +TL +A ISF I+++IG + + + S +IS I +V Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEI---FV 558 Query: 63 WIFRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSII 115 + RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I Sbjct: 559 DVIRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQ 618 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+F Sbjct: 619 AVPVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELF 678 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 QT + I++ YQ +Y LA YL++ + + ++E + Sbjct: 679 QTGKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|168491161|ref|ZP_02715304.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC0288-04] gi|183574490|gb|EDT95018.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC0288-04] Length = 721 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 129/222 (58%), Gaps = 14/222 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYV 62 W L+ +++ QLL + + +TL +A ISF I+++IG + + + S +IS I +V Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEI---FV 558 Query: 63 WIFRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSII 115 + RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I Sbjct: 559 DVIRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQ 618 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+F Sbjct: 619 AVPVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELF 678 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 QT + I++ YQ +Y LA YL++ + + ++E + Sbjct: 679 QTGKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|146320335|ref|YP_001200046.1| amino acid ABC transporter permease [Streptococcus suis 98HAH33] gi|145691141|gb|ABP91646.1| ABC-type amino acid transport system, permease component [Streptococcus suis 98HAH33] Length = 194 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 62/177 (35%), Positives = 107/177 (60%), Gaps = 11/177 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPH-------IGIV---FDSFVAIIISLTLNF 102 +++ + YVWIFRGTP++VQ+ + F + H +GI+ + II +++N Sbjct: 13 VLAWTANIYVWIFRGTPMIVQIMIAF-AMTHFVAPTFQLGILTVDLTRLIPGIIVISMNS 71 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AY+SE +R+ I ++PKGQ +A+Y++G+ KQ +R++I+PQ I L +EF++I+K Sbjct: 72 GAYVSETVRAGINAVPKGQLEAAYSLGIRPKQAMRYVIMPQAIKNILPALGNEFVTIVKD 131 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 +S+ STI + E++ AQ + ST+Y PL A YLI+T+ +I E + + Sbjct: 132 SSLLSTIGVMELWNGAQTVQSTSYIPLTPLVFAASYYLIMTTVLTVIIQSFEKKLNK 188 >gi|332201703|gb|EGJ15773.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA47368] Length = 721 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 129/222 (58%), Gaps = 14/222 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYV 62 W L+ +++ QLL + + +TL +A ISF I+++IG + + + S +IS I +V Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSFRVISEI---FV 558 Query: 63 WIFRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSII 115 + RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I Sbjct: 559 DVIRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQ 618 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+F Sbjct: 619 AVPVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELF 678 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 QT + I++ YQ +Y LA YL++ + + ++E + Sbjct: 679 QTGKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|311068998|ref|YP_003973921.1| high affinity arginine ABC transporter permease [Bacillus atrophaeus 1942] gi|310869515|gb|ADP32990.1| high affinity arginine ABC transporter permease [Bacillus atrophaeus 1942] Length = 219 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 123/199 (61%), Gaps = 6/199 (3%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I +S VI LI+G +++ +I +I I FY +FRGTPL++QL ++++GLP Sbjct: 21 ITLKIVVVSAVIGLILGIVLSLCKISTFRPLI-WIADFYTSVFRGTPLVLQLMIVYFGLP 79 Query: 83 HI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + G D F A + +L+LN +AY+SEIIR+ I +I KGQ +A+ A+G+ + ++ ++L Sbjct: 80 QLLGFQIDQFWAAVAALSLNSAAYVSEIIRAGINAIDKGQKEAAVALGVPYSKMMKDLLL 139 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY---QPLIIYCELAFV 198 PQ + + +E I++ K +++ + I + +I + A + + TY +PLII + +V Sbjct: 140 PQAFKNISPAIVNELITLTKESAIVTVIGLGDIMRRAYQAGAATYNYLEPLIIAGLIYYV 199 Query: 199 Y-LILTSFCYIIQIKIESS 216 LILT I+ K++++ Sbjct: 200 LVLILTFVGKAIERKLKAN 218 >gi|296329884|ref|ZP_06872368.1| putative ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676610|ref|YP_003868282.1| putative ABC transporter permease [Bacillus subtilis subsp. spizizenii str. W23] gi|296152923|gb|EFG93788.1| putative ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414854|gb|ADM39973.1| putative ABC transporter (permease) [Bacillus subtilis subsp. spizizenii str. W23] Length = 224 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/219 (33%), Positives = 122/219 (55%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W +I +FP L+ A+ +TL +A + V ++I G +A+I ++ + Y+ Sbjct: 5 DW-EFMISAFPTLI-QALPITLFMAIAAMVFAIIGGLILALITKN-KIPVLHQLSKLYIS 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI---IISLTLNFSAYISEIIRSSIISIPKG 120 FRG P LVQLF+I+YGLP + A+ II L+L +AY++EI R+++ S+ G Sbjct: 62 FFRGVPTLVQLFLIYYGLPQLFPEMSKMTALTAAIIGLSLKNAAYLAEIFRAALNSVDDG 121 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A ++G+T+ Q R IILPQ I + + FI +LK TS+A T+ + E+F + Sbjct: 122 QLEACLSVGMTKLQAYRRIILPQAIRNAIPATGNTFIGLLKETSLAFTLGVMEMFAQGKM 181 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S + Y +A VY +LT I+Q E ++++ Sbjct: 182 YASGNLKYFETYLAVAIVYWVLTIIYSILQDMFERAMSK 220 >gi|91225414|ref|ZP_01260536.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] gi|269966668|ref|ZP_06180747.1| polar amino acid ABC transporter, permease protein [Vibrio alginolyticus 40B] gi|91189777|gb|EAS76050.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] gi|269828735|gb|EEZ82990.1| polar amino acid ABC transporter, permease protein [Vibrio alginolyticus 40B] Length = 265 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 123/193 (63%), Gaps = 6/193 (3%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII-SLIMHFYVWIFRGTPLL 71 +P L ++VTL I+ IS +L++G A++R+ SD+ + ++I YV + R TPLL Sbjct: 56 WPAELIDGLLVTLNISAISLFFTLVLGLVTALLRL--SDSKVGNVIGTTYVEVIRNTPLL 113 Query: 72 VQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 VQ++++++ P IG+ D F +++L+L AY +EI R+ + SIPKGQ++A+ +GL Sbjct: 114 VQIYLLYFVFGPVIGL--DRFSTAVLALSLFQGAYTAEIFRAGLNSIPKGQFEAAQTLGL 171 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + T + +ILPQ + + PL++E +S++K++S+ S + I ++ A+ IVS T P Sbjct: 172 SPFYTYKDVILPQVLQRTLPPLTNEVVSLIKNSSIVSVMAIFDLTTQARNIVSETAMPFE 231 Query: 191 IYCELAFVYLILT 203 I+ +A +YL LT Sbjct: 232 IWFTVAAIYLALT 244 >gi|89098934|ref|ZP_01171814.1| amino acid ABC transproter, permease [Bacillus sp. NRRL B-14911] gi|89086338|gb|EAR65459.1| amino acid ABC transproter, permease [Bacillus sp. NRRL B-14911] Length = 215 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 113/193 (58%), Gaps = 4/193 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I+++P L +++T + +S I++ IG F A ++I ++ I Y+++ RGTP Sbjct: 8 IETYPVFL-RGMLLTFELTIVSVFIAIFIGLFFAFLKIS-RIKVLEWIADIYIFLVRGTP 65 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 L+VQ+F+ ++GL + I F+A+++ L + AYI+EI R SI SI KGQ +A ++G Sbjct: 66 LVVQIFIFYFGLTSLNI--SQFLAVVLGLAFHNGAYIAEIFRGSIQSIEKGQMEAGRSLG 123 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 ++ +R IILPQ + + PL ++FI LK +S+AS I + E+F A S Y + Sbjct: 124 MSAGLAMRRIILPQAVRRALPPLGNQFIIALKDSSLASFIGMYELFNVATTYGSNEYDYM 183 Query: 190 IIYCELAFVYLIL 202 +A YLIL Sbjct: 184 SYLLIVAVYYLIL 196 >gi|325267600|ref|ZP_08134252.1| arginine ABC superfamily ATP binding cassette transporter, membrane protein [Kingella denitrificans ATCC 33394] gi|324980950|gb|EGC16610.1| arginine ABC superfamily ATP binding cassette transporter, membrane protein [Kingella denitrificans ATCC 33394] Length = 219 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 60/179 (33%), Positives = 104/179 (58%), Gaps = 2/179 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 II + P+ +AA +TL +A V+SL +G AV + + ++ + YV + R T Sbjct: 6 IIQAAPRFFHAA-KLTLELAAYGIVLSLAVGLAAAVC-MAYRLPVLDRLSRGYVELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF ++YGLP IGI D F +I+L Y++E +R+ ++++PKGQ +A+ AI Sbjct: 64 PLLIQLFFLYYGLPKIGIKIDGFTCGVIALVFLGGGYMAEALRAGLLAVPKGQTEAAKAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GL Q R+++LPQ S +++ + ++K TSV +++ E+ + I+ Y+ Sbjct: 124 GLGNVQIFRYVVLPQAWAVSLPAIAANVLFLIKETSVIGAVSVAELMFVTKDIIGMDYK 182 >gi|294498828|ref|YP_003562528.1| sulfur-containing amino acid ABC transporter permease TcyL [Bacillus megaterium QM B1551] gi|294348765|gb|ADE69094.1| sulfur-containing amino acid ABC transporter, permease protein TcyL [Bacillus megaterium QM B1551] Length = 232 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 82/229 (35%), Positives = 127/229 (55%), Gaps = 17/229 (7%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 LI S PQLL + + +T+ I S VI +G FIA+ RI+ ++S I Y+ R Sbjct: 8 ELIFTSIPQLL-SYLHITIWILIASLVIGSTLGLFIALPRIY-KVPVLSQIAAVYISFMR 65 Query: 67 GTPLLVQLFVIFYGLP------HIGIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 GTP+L+QLF++FYG+P HI + V +II+ +L+ +A SE++R +I S+ K Sbjct: 66 GTPILIQLFLVFYGIPALLQLIHIDVSRMAPLVFVIITYSLSTAASFSEMMRGAINSVDK 125 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+Y+IG+T KQT I+LPQ + + + I LK TS+A TI + ++ Sbjct: 126 GQTEAAYSIGMTGKQTFTRIVLPQALVVAFPNFGNLVIGSLKDTSLAFTIGVMDMMGRGD 185 Query: 180 RIVSTTYQPLIIYCELA----FVYLILTSFCYIIQIKIESSVTQHTYSV 224 I++ T + +Y LA FV +IL F +K E + +H V Sbjct: 186 TIIAATAHAVEVYIALAIIYYFVAIILEKFF----VKSEQKLQKHDQPV 230 >gi|296127369|ref|YP_003634621.1| polar amino acid ABC transporter, inner membrane subunit [Brachyspira murdochii DSM 12563] gi|296019185|gb|ADG72422.1| polar amino acid ABC transporter, inner membrane subunit [Brachyspira murdochii DSM 12563] Length = 216 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 116/197 (58%), Gaps = 5/197 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + ++ + SL + A ++ F + I I Y WIFRGTPL++QL +YGLP Sbjct: 17 ITLCLYFVTAIFSLPLSMLFAALQ-FSAPKFIRYIFDIYAWIFRGTPLILQLIFFYYGLP 75 Query: 83 HIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + I F +F + ++ LN+SAY+ EI R+ I SI KGQ++A +A+ L+ +Q + I Sbjct: 76 LMTNNMIAFPAFTSAAVTFILNYSAYLMEIFRAGIESIEKGQYEAGFALNLSYRQIMTRI 135 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + PLS+E I+++K T++ + I ++ A++I++ Y+ L + A +Y Sbjct: 136 ILPQAVRRVLPPLSNEAINLIKDTALVIVLGIGDLMLHARQILTRDYKLLPFFIA-AIIY 194 Query: 200 LILTSFCYIIQIKIESS 216 L+ TS ++ ++E Sbjct: 195 LLFTSILVLVFRQLEKK 211 >gi|229083879|ref|ZP_04216188.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-44] gi|228699457|gb|EEL52133.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-44] Length = 214 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/157 (41%), Positives = 100/157 (63%), Gaps = 1/157 (0%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL IA I+ ++S IIG + +R + ++S ++ V I R PLL+ +F ++ LP Sbjct: 21 VTLEIAVIAILLSFIIGSVVGTLR-YTKIPVVSQLLALIVEIIRNLPLLLIIFFTYFALP 79 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ A GL+ QT+ +IILP Sbjct: 80 EAGLKLEITTAAIVALTIFEAAMISEIVRSGLLSIEKGQIEAARASGLSYAQTLWYIILP 139 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 140 QALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|182684032|ref|YP_001835779.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CGSP14] gi|303254264|ref|ZP_07340373.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS455] gi|303258876|ref|ZP_07344855.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP-BS293] gi|303261559|ref|ZP_07347506.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP14-BS292] gi|303264230|ref|ZP_07350150.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS397] gi|303266139|ref|ZP_07352032.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS457] gi|303268134|ref|ZP_07353934.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS458] gi|182629366|gb|ACB90314.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CGSP14] gi|301801904|emb|CBW34628.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae INV200] gi|302598758|gb|EFL65795.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS455] gi|302637139|gb|EFL67627.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP14-BS292] gi|302639819|gb|EFL70275.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP-BS293] gi|302642351|gb|EFL72698.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS458] gi|302644309|gb|EFL74563.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS457] gi|302646042|gb|EFL76269.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS397] Length = 721 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 129/222 (58%), Gaps = 14/222 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYV 62 W L+ +++ QLL + + +TL +A ISF I+++IG + + + S +IS I +V Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEI---FV 558 Query: 63 WIFRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSII 115 + RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I Sbjct: 559 DVIRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQ 618 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+F Sbjct: 619 AVPVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELF 678 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 QT + I++ YQ +Y LA YL++ + + ++E + Sbjct: 679 QTGKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|329117370|ref|ZP_08246087.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] gi|326907775|gb|EGE54689.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] Length = 213 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 120/211 (56%), Gaps = 9/211 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRG 67 I+ P LL A+V TL + I ++S+ +G +A ++++ F + + YVW+ RG Sbjct: 4 ILQVLPSLLDGAMV-TLQVFSIVIILSIPLGAVLAFLMKVNFKP--LQWFLTLYVWVMRG 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL +Y LP +GI FD A I++ T+N++AY +EI R I +IPKGQ++A+ Sbjct: 61 TPLLLQLIFFYYVLPSVGITFDRMPAAILAFTMNYAAYFAEIFRGGIEAIPKGQYEAAKV 120 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TT 185 + +++ QTIRHIILPQ + +E I+++K +S+ + + ++ ++ + T Sbjct: 121 LKMSQLQTIRHIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKTAANRDAT 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 P+ I +YL+L +I +E Sbjct: 181 LAPMFI---AGIIYLLLIGIVTLISRHVEKR 208 >gi|28900676|ref|NP_800331.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD 2210633] gi|260365550|ref|ZP_05778087.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|260877614|ref|ZP_05889969.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|260895965|ref|ZP_05904461.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|260901646|ref|ZP_05910041.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|28809056|dbj|BAC62164.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus RIMD 2210633] gi|308085227|gb|EFO34922.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|308090547|gb|EFO40242.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|308108934|gb|EFO46474.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|308114332|gb|EFO51872.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus K5030] Length = 265 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 123/193 (63%), Gaps = 6/193 (3%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII-SLIMHFYVWIFRGTPLL 71 +P L ++VTL I+ IS +L++G A++R+ SD+ + ++I YV + R TPLL Sbjct: 56 WPAELIDGLLVTLNISAISLFFTLVLGLVTALLRL--SDSKVGNVIGTTYVEVIRNTPLL 113 Query: 72 VQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 VQ++++++ P IG+ D F +++L+L AY +EI R+ + SIPKGQ++A+ +GL Sbjct: 114 VQIYLLYFVFGPVIGL--DRFSTAVLALSLFQGAYTAEIFRAGLNSIPKGQFEAAQTLGL 171 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + T + +ILPQ + + PL++E +S++K++S+ S + I ++ A+ IVS T P Sbjct: 172 SPFYTYKDVILPQVLQRTLPPLTNEVVSLIKNSSIVSVMAIFDLTTQARNIVSETAMPFE 231 Query: 191 IYCELAFVYLILT 203 I+ +A +YL LT Sbjct: 232 IWFTVAAIYLALT 244 >gi|310829835|ref|YP_003962192.1| amino acid ABC transporter [Eubacterium limosum KIST612] gi|308741569|gb|ADO39229.1| amino acid ABC transporter [Eubacterium limosum KIST612] Length = 218 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 119/203 (58%), Gaps = 13/203 (6%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIF 78 +VTL + ++ + SL +GF ++ S + I ++ F Y++I RGTPLL+QL ++ Sbjct: 18 LVTLAVFAVTIISSLPLGFLFTLM----SRSRIMVLRGFAEVYIYILRGTPLLLQLMFVY 73 Query: 79 YGLP---HIG--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 +GLP +G +VFD F A I+ LN++AY +EI R +++I KGQ++AS +GLT+ Sbjct: 74 FGLPLLPGVGKFLVFDRFSAACIAFGLNYAAYFAEIFRGGLLAIDKGQYEASKVLGLTKF 133 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 +T+ +++PQ I +S+E I++LK T++ +TI + EI A+ V+ P + Sbjct: 134 ETMTRVVIPQMIRVCLPSISNETITLLKDTALVTTIGVAEIIHYAKTAVNRDANPF-AFV 192 Query: 194 ELAFVYLILTSFCYIIQIKIESS 216 A +YL++ I K+E Sbjct: 193 VAAAIYLVINFVLTFIFKKLEKK 215 >gi|254465341|ref|ZP_05078752.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodobacterales bacterium Y4I] gi|206686249|gb|EDZ46731.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodobacterales bacterium Y4I] Length = 224 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 61/179 (34%), Positives = 108/179 (60%), Gaps = 7/179 (3%) Query: 44 VIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTL 100 VI++ D ++ L + F FRGTPLLVQLF+ ++GLP + + A I+ LTL Sbjct: 46 VIKVPVLDRLVVLFISF----FRGTPLLVQLFLFYFGLPQLLPALANINGVTAAIMGLTL 101 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 +F+AY++E IR++I + + QW+A+ +IG+T+ Q +R IILPQ +A L + FI ++ Sbjct: 102 HFAAYMAESIRAAIAGVDRSQWEAAQSIGMTQAQMMRRIILPQAARIAAPTLVNYFIDMI 161 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 K TS+A T+ + E+ AQ+ + ++ + +A +Y I+ +Q ++E+ + + Sbjct: 162 KGTSLAFTLGVTEMMGAAQKEAAGSFLYFEAFLVVAVIYWIMVEALSQVQGRLETRLNK 220 >gi|169351674|ref|ZP_02868612.1| hypothetical protein CLOSPI_02455 [Clostridium spiroforme DSM 1552] gi|169291896|gb|EDS74029.1| hypothetical protein CLOSPI_02455 [Clostridium spiroforme DSM 1552] Length = 238 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 75/219 (34%), Positives = 122/219 (55%), Gaps = 21/219 (9%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR-----------IFFSDTII 54 + + + +FPQ LY I +T+ A + I L+IG + IR I I+ Sbjct: 9 WEIFVSNFPQFLYG-IEITVLYAIVGTAIGLLIGLLVGTIRAIEINEQDPVIIKSLKKIL 67 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 LI FY+W+FRGTP+LVQ ++Y L I + + A ++ +++N AY++EIIRS I Sbjct: 68 KLITGFYLWVFRGTPMLVQAMFLYYLLKPI-LGWTGITAGLVIISINTGAYMAEIIRSGI 126 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+ GQ +A+ +IG++ QT R I+LPQ I S + ++ I +K +S+ + I++ E+ Sbjct: 127 QSVDIGQTEAAKSIGMSTVQTFRKIVLPQAIKNSFPSIGNQLIINIKDSSMLNVISVTEV 186 Query: 175 FQTAQRIVSTTYQPLIIYCELAF----VYLILTSFCYII 209 + + I +TYQ Y E F +YLILT+ +I Sbjct: 187 YFQSTSIAGSTYQ----YTETFFITMIIYLILTTIASLI 221 >gi|169834415|ref|YP_001694671.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae Hungary19A-6] gi|168996917|gb|ACA37529.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae Hungary19A-6] Length = 721 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 129/222 (58%), Gaps = 14/222 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYV 62 W L+ +++ QLL + + +TL +A ISF I+++IG + + + S +IS I +V Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEI---FV 558 Query: 63 WIFRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSII 115 + RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I Sbjct: 559 DVIRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQ 618 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+F Sbjct: 619 AVPVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELF 678 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 QT + I++ YQ +Y LA YL++ + + ++E + Sbjct: 679 QTGKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|257876242|ref|ZP_05655895.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|257810408|gb|EEV39228.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] Length = 529 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 113/208 (54%), Gaps = 10/208 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISL 56 F IID + L +TL IA +S +I LIIG + + R F I++ Sbjct: 292 FKKIIDDYGMLFLRGAGLTLFIAILSTIIGLIIGLLVGIFRTLPLSENPVGRFFQRIVNG 351 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 ++ Y+ +FRGTP++VQ VIFYG G+ + +A ++ +++N AY+SEI+R I Sbjct: 352 LLTIYIEVFRGTPMMVQAMVIFYGTALAFGVSMNRTLAAVLIVSINTGAYMSEIVRGGIF 411 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ GQ++A+ AIG+T QT+ ++LPQ + +E I +K T+V S I++ ++F Sbjct: 412 AVDDGQFEAAQAIGMTHWQTMIKVVLPQVMRNILPATGNEIIINIKDTAVLSVISVADLF 471 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 T +Q + + +YL+LT Sbjct: 472 FQGTSAAGTNFQYFQTFAIIGVIYLVLT 499 >gi|239834033|ref|ZP_04682361.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239822096|gb|EEQ93665.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 218 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/199 (32%), Positives = 119/199 (59%), Gaps = 3/199 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTII-SLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 T+ ++ I+FV I G +A++R+ SD + I ++ +F+GTPLL+QLF++F+GL Sbjct: 20 TIALSAIAFVGGGIGGLLVALMRV--SDARVPRFIALGFIRLFQGTPLLMQLFLVFFGLN 77 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 G+ + ++A I+LTL+ SA++ EI R I ++P GQ +A+ A+GL +R++ILP Sbjct: 78 IFGLGINPWIAATIALTLHASAFLGEIWRGCIDAVPPGQREAATALGLRYYNRMRYVILP 137 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q S P + ++K TS+A+ I E+ + Q I + T+ P +++ +A +Y +L Sbjct: 138 QAARISVAPTVGFLVQLIKGTSLAAIIGFTELTRQGQIINNATFSPFMVFGTVAAIYFVL 197 Query: 203 TSFCYIIQIKIESSVTQHT 221 I+ ++E+ ++ T Sbjct: 198 CWPLSILARRMEARFSRAT 216 >gi|222081097|ref|YP_002540460.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725776|gb|ACM28865.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 223 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 2/200 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y W I LL + TL ++ S V L G + ++R+ S+ IS++ Sbjct: 1 MNYTWDFTPIRMNAGLLLEGLGNTLLLSAASIVAGLCFGIVLVLMRLS-SNKPISIVGTA 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 + +R TP LV F FYGLP IG+ D FVA I+L++ A+ +E+ R IISI + Sbjct: 60 IIEFYRNTPPLVHFFWYFYGLPILIGVSLDPFVAAWIALSIQSGAFFAEVFRGGIISIER 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A+ A+G+ + +R IILPQ + PL ++K+TS+A+T+ ++ A Sbjct: 120 GQWEAARALGMRGGRIMRRIILPQALRRMIPPLMERSFELVKTTSLAATLAYGDLVYQAM 179 Query: 180 RIVSTTYQPLIIYCELAFVY 199 + S TY+PL Y +A ++ Sbjct: 180 VVTSQTYRPLETYTTVAVLF 199 >gi|261406922|ref|YP_003243163.1| polar amino acid ABC transporter inner membrane subunit [Paenibacillus sp. Y412MC10] gi|261283385|gb|ACX65356.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. Y412MC10] Length = 261 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 127/214 (59%), Gaps = 9/214 (4%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P+LL + + VT+ I S ++ +++GF +A+ R++ + + M Y+ FRGTP+L+Q Sbjct: 15 PKLL-STLGVTMLIVAGSLLVGIVVGFLVALPRLYRIPMLNAFSM-VYISFFRGTPILIQ 72 Query: 74 LFVIFYGLP------HIGIVFDS-FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 LF+ +YGLP HI + V +I++ L+ A++SE+IR+S+ ++ +GQ +A+Y Sbjct: 73 LFLFYYGLPEMLKLVHIDLSRAPVMVFVILTYGLHTGAFMSEMIRASVTAVDRGQVEAAY 132 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G+ Q I+LPQ + + S+ I++LK TS+A T+ + E+ AQ + + T Sbjct: 133 AMGMKGHQAFLRIVLPQALAIAVPVFSNMVIALLKDTSLAFTLGLMEMTGKAQTLGNITQ 192 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + Y LAF+YL+++ + ++ E + +H Sbjct: 193 HFIEAYLALAFIYLVISFTLEKLLLRAERRLMRH 226 >gi|114771230|ref|ZP_01448650.1| ABC-type glutamine transport system, permease component [alpha proteobacterium HTCC2255] gi|114548155|gb|EAU51042.1| ABC-type glutamine transport system, permease component [alpha proteobacterium HTCC2255] Length = 252 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 76/194 (39%), Positives = 113/194 (58%), Gaps = 7/194 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L + I T+ I+ ++ IS+ +G +A+ S +I YV R PLL L Sbjct: 39 KFLVSGIGNTILISIVAAFISINLGLLVALPGQS-SRKGWRIINRVYVEFIRSIPLLPML 97 Query: 75 FVIFYGLP------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 F +FYGLP + I D F +I+L ++ SA+ +EI RS I SI KGQ +A+++I Sbjct: 98 FWVFYGLPIIFKSMGLNIPIDPFWGAVITLAISDSAFTAEIYRSGIQSIAKGQKEAAHSI 157 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT QT+R++ILPQ I PL+++FI I+K ++ AS I + E+ + A IV T Y+P Sbjct: 158 GLTYAQTMRYVILPQAIRRILPPLANQFIYIVKMSAFASVIGMQELTRRANEIVVTEYRP 217 Query: 189 LIIYCELAFVYLIL 202 L IY L YL+L Sbjct: 218 LEIYSLLILEYLVL 231 >gi|227432357|ref|ZP_03914349.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351878|gb|EEJ42112.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 490 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 59/154 (38%), Positives = 98/154 (63%), Gaps = 2/154 (1%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEII 110 + I+ +I + YV RGTPLLVQ F++F+G IG+ +F A +++ LN +AY++EII Sbjct: 319 NAILRIIGNVYVEYVRGTPLLVQAFMVFFGTQVIGLNLSAFAAGALAMGLNSAAYVAEII 378 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 RS I S+ GQ +AS ++GL++ +T+R++ILPQ + L +EF++I+K SV S I Sbjct: 379 RSGINSVDFGQTEASRSLGLSKGKTMRYVILPQAVKNILPALGNEFVTIIKEGSVVSVIG 438 Query: 171 IPEI-FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + E+ FQT + +++P + +Y +LT Sbjct: 439 VGELMFQTGV-VQGASFKPFFPLVIASLIYFVLT 471 >gi|310659739|ref|YP_003937460.1| ABC transporter permease [Clostridium sticklandii DSM 519] gi|308826517|emb|CBH22555.1| putative transporter subunit: permease component of ABC superfamily transporter [Clostridium sticklandii] Length = 223 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 123/207 (59%), Gaps = 8/207 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++ FN+++ + +LL +A+ +TL + ++ +I L G FI ++R +F I LI+ Sbjct: 1 MNFD-FNILVKALVELL-SALPITLSVGLLAMLIGLGFGIFIGIVR-YFKLPGIDLILRG 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI----GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 YV FRGTPL++QLF+ F+GLP + G + +F A ++ +++N +AYI+E R++I+S Sbjct: 58 YVSFFRGTPLMIQLFLFFFGLPQLFPSLGNI-GAFEASVLIMSMNSAAYIAETTRAAILS 116 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + K Q DA ++GLT QT+ ++ LPQ + + + FI I++ T++ + + ++ Sbjct: 117 VDKLQQDAGLSVGLTLWQTMLYVQLPQALRVAIPSFGNTFIGIIQGTALTFMLGLNDLMG 176 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 + + Y+ IY + +Y +T Sbjct: 177 LGKMKAAVNYKFFEIYLAVGLIYWAIT 203 >gi|116254189|ref|YP_770027.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115258837|emb|CAK09943.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 215 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ +F I+G I RI + S Y+ +F+GTPLL+QLF++F+GLP Sbjct: 20 TLLLSLAAFAGGAIVGLAILSARISKTRWPRSFASG-YIALFQGTPLLMQLFLMFFGLPM 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G +S+ A + LT SAY++EI RS + ++P+GQWDA+ ++GL R +R IILPQ Sbjct: 79 LGFRIESWTAAVCGLTFYASAYLAEIWRSGVEAVPRGQWDAAASLGLHRLLELRLIILPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + P + ++KST++AS + E+ +TA I + T++P +Y V LI Sbjct: 139 AFRITRAPTVGFLVQLIKSTALASILGFDELLKTANAINNATFEPFKVY---GLVALIFF 195 Query: 204 SFCY 207 + CY Sbjct: 196 ALCY 199 >gi|120609705|ref|YP_969383.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax citrulli AAC00-1] gi|120588169|gb|ABM31609.1| amino acid ABC transporter membrane protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 217 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 118/201 (58%), Gaps = 5/201 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + I+ +++ +G +A+ R+ ++S +++ Y+W+ RGTPL++Q+ I++ LP Sbjct: 17 VTLKLFAITLGLAVPLGLALALARVS-RWGLLSGLVNGYIWLMRGTPLMLQMLFIYFALP 75 Query: 83 H---IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 IG+ F A +++ LN++AY +EI R+ I SI +GQ++A+ +G+T QT+R I Sbjct: 76 FVPVIGVRLPDFPAAVVAFALNYAAYFAEIFRAGIQSIDRGQYEAAKVLGMTYGQTMRRI 135 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + P+S+E I+++K TS+ + + ++ + A+ IV + AF Y Sbjct: 136 VLPQMVRRILPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDFTTTPFLVAAAF-Y 194 Query: 200 LILTSFCYIIQIKIESSVTQH 220 L++T ++E +H Sbjct: 195 LVMTLVLTWGFQRLERRYARH 215 >gi|54308669|ref|YP_129689.1| amino acid ABC transporter permease [Photobacterium profundum SS9] gi|46913098|emb|CAG19887.1| hypothetical amino acid ABC transporter, permease protein [Photobacterium profundum SS9] Length = 315 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 127/200 (63%), Gaps = 10/200 (5%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF-YVWIFRGTPLLVQLFVIFYGL 81 VTL I+ IS ++IIG ++RI S+ ++ + F YV I RGTPLL+Q+F++++ Sbjct: 119 VTLKISIISLFFAVIIGLVAGLMRI--SNNPVTKNLSFLYVEIIRGTPLLIQIFIVYF-- 174 Query: 82 PHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 +G +FD F A +++L++ AYI+EIIRS I SIP GQ +A+ ++G+ + + ++ Sbjct: 175 -FLGTIFDLERFTAGVVALSVFTGAYIAEIIRSGIQSIPPGQMEAARSLGMNYPKAMAYV 233 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + P++ + I+++K +S+ S I+I ++ + + ++S ++ ++ +A +Y Sbjct: 234 ILPQAFKRTLPPMAGQLITLIKDSSLVSVISITDLTKAGREVISGSFATFEVWFVVAGLY 293 Query: 200 LILT-SFCYIIQIKIESSVT 218 L+LT S +++Q +IE + Sbjct: 294 LLLTISLSWVVQ-RIEKRLA 312 >gi|312958495|ref|ZP_07773015.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] gi|311287038|gb|EFQ65599.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] Length = 319 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 122/199 (61%), Gaps = 8/199 (4%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ +S ++ L IG + R+ + T+ L YV + RGTPLLVQ+F+ ++ Sbjct: 124 TLWLSAVSGILGLAIGLATGLCRLSSNPTLRDLST-IYVELVRGTPLLVQIFIFYF---F 179 Query: 84 IGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IG V + A I +L+L AY++EI+R+ + SI +GQ +A+ ++GL+ Q++RH++L Sbjct: 180 IGTVLNLSREFAGIAALSLFTGAYVAEIVRAGVQSITRGQNEAARSLGLSAGQSMRHVVL 239 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL-IIYCELAFVYL 200 PQ PL+ +FIS++K TS+ S I I E+ ++ + +++T++ P I++C +A +YL Sbjct: 240 PQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFC-VAGLYL 298 Query: 201 ILTSFCYIIQIKIESSVTQ 219 ++ + ++E + Q Sbjct: 299 LINLPLSKMASRLERRLAQ 317 >gi|238853596|ref|ZP_04643965.1| ABC-type amino acid transport system, permease component [Lactobacillus gasseri 202-4] gi|238833740|gb|EEQ26008.1| ABC-type amino acid transport system, permease component [Lactobacillus gasseri 202-4] Length = 214 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 105/172 (61%), Gaps = 2/172 (1%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV 92 V+S+ +G +A + + ++ I+ FYVWI RGTPLL+QL IFYGLP +GIVF + Sbjct: 28 VVSIPLGLLVA-FGLHSNLKLVKAILKFYVWIIRGTPLLLQLIFIFYGLPTVGIVFPRYE 86 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 A +++ +N++AY +EI R + ++P GQ++A+ +GL+R QTI I+ PQ + + Sbjct: 87 AALVAFIINYAAYFAEIFRGGLQAVPVGQFEAAQVLGLSRLQTINRIVRPQVVKIVLPSI 146 Query: 153 SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 +E I+++K +S+ I + ++ + A + + L+ + VYL +T+ Sbjct: 147 GNELINLVKDSSLVYVIGLGDLLR-AGNVATARDVSLVPLVLVGCVYLAMTA 197 >gi|111022633|ref|YP_705605.1| glutamine transport system permease protein [Rhodococcus jostii RHA1] gi|110822163|gb|ABG97447.1| probable glutamine transport system permease protein [Rhodococcus jostii RHA1] Length = 489 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 127/215 (59%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 LI ++P LL + +T+ + +S I+L++G + R+ ++ ++ I YV +F Sbjct: 277 LGLIKSTYP-LLLEGLWLTIVLTVVSIAIALVLGAIFGLFRVS-TNIVLRGIGTTYVDVF 334 Query: 66 RGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQ F I++G+P + +F A II+L+LN AY++EI+R I+S+ KGQ +A Sbjct: 335 RGTPLLVQAFFIYFGIPAALDFQMSAFTAGIITLSLNAGAYMAEIVRGGILSVDKGQMEA 394 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 S ++G++ ++++ +++PQ + T ++F+ LK TS+ S I + E+ QT + I++ Sbjct: 395 SRSLGISYLKSMQKVVMPQAVRTMIPSYINQFVITLKDTSILSVIGLAELTQTGRIIIAR 454 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 +Q ++ + +Y I+ + ++E + + Sbjct: 455 NFQSFNMWLIIGVMYFIIIMALTKLSNRLEKRINK 489 >gi|77456453|ref|YP_345958.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77380456|gb|ABA71969.1| amino acid ABC transporter membrane protein 1, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 221 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 62/182 (34%), Positives = 107/182 (58%), Gaps = 2/182 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + I+ + P L A+ VTL + I+ SL++ A I +F + + L+ YV + Sbjct: 5 YAFILSTLPAFL-KAVGVTLQVGLIAIGTSLLVALLNATILVFRTPYLQKLV-GLYVELA 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL+QLF +++ LP +GI F A II++T AY++E++R+ + ++P+ Q ++ Sbjct: 63 RNTPLLIQLFFVYFALPALGIKVSGFTAAIITMTFLGGAYLTEVLRAGVDAVPQAQLESG 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IGL+ Q +R++ILPQ S L + FI +LK T+V S + +PEI T + ++ Sbjct: 123 RSIGLSHGQLLRYVILPQAGILSLPSLFANFIFLLKETTVVSAVAVPEILYTTKSYIALY 182 Query: 186 YQ 187 Y+ Sbjct: 183 YK 184 >gi|291288058|ref|YP_003504874.1| polar amino acid ABC transporter, inner membrane subunit [Denitrovibrio acetiphilus DSM 12809] gi|290885218|gb|ADD68918.1| polar amino acid ABC transporter, inner membrane subunit [Denitrovibrio acetiphilus DSM 12809] Length = 316 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 128/205 (62%), Gaps = 8/205 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + ++VTL I+ S ++IIG + RI + + + FY+ I RGTPLLVQ+F+ Sbjct: 113 LLSGLLVTLEISIYSIFFAIIIGVMTGLARIS-KNPFLKKLSVFYIEIIRGTPLLVQIFI 171 Query: 77 IFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 ++ IG VF+ A + +L++ AYI+EI+R+ I S+ KGQ +A+ ++G++ + Sbjct: 172 FYF---FIGTVFNLERMTAGVAALSVFTGAYIAEIVRAGIQSVHKGQMEAARSLGMSYPK 228 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + +ILPQ + P++ +FIS++K +S+ S I+I ++ + + +V++T+ P ++ Sbjct: 229 AMVLVILPQAFRRTLPPMAGQFISLIKDSSLVSVISITDLTKAGREVVASTFSPFEVWFT 288 Query: 195 LAFVYLILTS-FCYIIQIKIESSVT 218 +A +YL+LTS Y++Q ++E ++ Sbjct: 289 VAALYLVLTSALSYLVQ-RLEKRMS 312 >gi|13474522|ref|NP_106091.1| ABC transporter permease protein [Mesorhizobium loti MAFF303099] gi|14025276|dbj|BAB51877.1| ABC transporter permease protein [Mesorhizobium loti MAFF303099] Length = 224 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 74/197 (37%), Positives = 113/197 (57%), Gaps = 7/197 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++I+ S P LL + TL + +S I + IG I+++R++ + L + Y IFR Sbjct: 11 DVIMSSLPALLRG-FLNTLLLGILSIGIGIPIGLLISLVRLYAPKPLRWLAVG-YTDIFR 68 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P+LV L +I+Y LP +GI S+ + + + SAY +E+ RS I SIPKGQ++AS Sbjct: 69 ALPVLVVLILIYYALPFLGIRLSSWASAVTAFAFIMSAYSAEVFRSGIESIPKGQFEASQ 128 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--T 184 A+GL T+R ++LPQ I P++S +S+ K TS+AST+ +PE+ + A S Sbjct: 129 ALGLPFLLTLRKVVLPQAIRVVIPPMTSNCVSMFKDTSLASTVALPELLKEATNAQSLYA 188 Query: 185 TYQPLIIYCELAFVYLI 201 PLI A VYLI Sbjct: 189 NPSPLI---GAALVYLI 202 >gi|239816642|ref|YP_002945552.1| polar amino acid ABC transporter inner membrane protein [Variovorax paradoxus S110] gi|239803219|gb|ACS20286.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 217 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 52/142 (36%), Positives = 92/142 (64%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV +F+GTPLL+QLF+ ++G+ GI ++ A ++LTL SA+++EI R + +IPKG Sbjct: 56 YVQLFQGTPLLMQLFLAYFGIALFGIDVSAWTAASVALTLYTSAFLTEIWRGCVAAIPKG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+AS ++ L+ + +RH+ILPQ + + P + ++K T++AS I E+ + Sbjct: 116 QWEASGSLALSFSEQMRHVILPQAVKIAIAPTVGFLVQVIKGTALASVIGFVELTKAGSM 175 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 I + T+QP +++ +A +Y +L Sbjct: 176 ISNATFQPFVVFSCVALLYFVL 197 >gi|325567258|ref|ZP_08143925.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] gi|325158691|gb|EGC70837.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] Length = 529 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 113/208 (54%), Gaps = 10/208 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISL 56 F IID + L +TL IA +S +I LIIG + + R F I++ Sbjct: 292 FKKIIDDYGMLFLRGAGLTLFIAILSTIIGLIIGLLVGIFRTLPLSENPVGRFFQRIVNG 351 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 ++ Y+ +FRGTP++VQ VIFYG G+ + +A ++ +++N AY+SEI+R I Sbjct: 352 LLTIYIEVFRGTPMMVQAMVIFYGTALAFGVSMNRTLAAVLIVSINTGAYMSEIVRGGIF 411 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ GQ++A+ AIG+T QT+ ++LPQ + +E I +K T+V S I++ ++F Sbjct: 412 AVDDGQFEAAQAIGMTHWQTMIKVVLPQVMRNILPATGNEIIINIKDTAVLSVISVADLF 471 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 T +Q + + +YL+LT Sbjct: 472 FQGTSAAGTNFQYFQTFAIIGVIYLVLT 499 >gi|318076288|ref|ZP_07983620.1| arginine/ornithine transport permease [Streptomyces sp. SA3_actF] gi|333024482|ref|ZP_08452546.1| putative ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. Tu6071] gi|332744334|gb|EGJ74775.1| putative ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. Tu6071] Length = 286 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 125/219 (57%), Gaps = 22/219 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + + T+ + ++ VI + G +AV+R+ + + S I FY+W FRGTP+LV Sbjct: 39 FDDRILSGLGKTMLLTVVAMVIGIAGGVVLAVMRLS-KNPVTSSIAWFYIWFFRGTPVLV 97 Query: 73 QLFVIFYGLPHIGIVFD-------------SFV----AIIISLTLNFSAYISEIIRSSII 115 QL V F ++G+VF+ SF+ ++ L LN +AY++EI R+ ++ Sbjct: 98 QLMVWF----NLGLVFEYINLGPLYKDYWSSFMTPLLTALLGLGLNEAAYMAEICRAGLL 153 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ +GQ +A++A+G++ +T+R I++PQ + P +E I++LK+TS+ + + PE+ Sbjct: 154 AVDEGQTEAAHALGMSHAKTLRRIVIPQAMRVIVPPTGNEVINMLKTTSLVAAVQYPELL 213 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + AQ I + P+ + A YLILTS I Q IE Sbjct: 214 RAAQDIGQVSGAPVEMLFLAAAWYLILTSVLSIGQFYIE 252 >gi|195978381|ref|YP_002123625.1| glutamine ABC transporter, glutamine-binding protein/permease protein GlnP [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975086|gb|ACG62612.1| glutamine ABC transporter, glutamine-binding protein/permease protein GlnP [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 713 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 110/192 (57%), Gaps = 8/192 (4%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI----- 84 ISF I+L+IG ++ + S + + +V + RG PL++ IF+G+P++ Sbjct: 519 ISFAIALVIGIVFGMMAVSPSKNL-RMASTIFVDVVRGIPLMIVAAFIFWGVPNLIESMT 577 Query: 85 --GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + FVA I+L+LN AYI+EI+R I ++P GQ +AS ++GL+ T+R IILP Sbjct: 578 GHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYHTTMRRIILP 637 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q I ++F+ LK T++ S I + E+FQT + I++ YQ +Y LA +YLI+ Sbjct: 638 QAIKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAVIYLIM 697 Query: 203 TSFCYIIQIKIE 214 + + ++E Sbjct: 698 ITLLTRLAKRLE 709 >gi|168484864|ref|ZP_02709809.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC1873-00] gi|172041971|gb|EDT50017.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC1873-00] Length = 721 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 129/222 (58%), Gaps = 14/222 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYV 62 W L+ +++ QLL + + +TL +A ISF I+++IG + + + S +IS I +V Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSFRVISEI---FV 558 Query: 63 WIFRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSII 115 + RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I Sbjct: 559 DVIRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQ 618 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+F Sbjct: 619 AVPVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELF 678 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 QT + I++ YQ +Y LA YL++ + + ++E + Sbjct: 679 QTGKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|241895818|ref|ZP_04783114.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] gi|241870861|gb|EER74612.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] Length = 218 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 117/202 (57%), Gaps = 8/202 (3%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W N+ + L + VT+ +A +S ++S IIG + VIR + +S I+ F + Sbjct: 8 FSWVNM------RFLMMGLGVTIEVAVVSIILSFIIGSILGVIR-YVKIPYLSQIVGFII 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + R PLL+ +F ++ LP IGI F + I +LT+ S ++EIIRS I+++PKGQ Sbjct: 61 DLIRNLPLLLIIFFTYFALPKIGIHFGVITSTIFALTIFESTMLAEIIRSGIMAVPKGQL 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + GL KQ + HIILPQ P+ S+F+S++K TS+A+ I +PE+ AQ + Sbjct: 121 EGALSNGLNFKQALWHIILPQAYKKMIPPIVSQFVSLIKDTSLATIIMLPEVTYRAQIVY 180 Query: 183 STTYQPLI-IYCELAFVYLILT 203 + +I ++ LA +Y IL Sbjct: 181 AQEPSAIISMFFALAVIYFILN 202 >gi|166032742|ref|ZP_02235571.1| hypothetical protein DORFOR_02457 [Dorea formicigenerans ATCC 27755] gi|166027099|gb|EDR45856.1| hypothetical protein DORFOR_02457 [Dorea formicigenerans ATCC 27755] Length = 236 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 75/229 (32%), Positives = 126/229 (55%), Gaps = 23/229 (10%) Query: 9 IIDSFPQLLYAAIVVTLPIACI----SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 +I S PQ I V LPI + S V LI+GFFIA+ R +F ++ + Y+ Sbjct: 10 LIQSIPQ-----IAVYLPITLLITIASCVAGLIVGFFIALAR-YFEVRVLKTVAKVYISF 63 Query: 65 FRGTPLLVQLFVIFYGLPHI--------GIVFD-----SFVAIIISLTLNFSAYISEIIR 111 RGTP +VQL +++YG+P + G FD V II+L LN +AY+SEIIR Sbjct: 64 IRGTPTMVQLVLVYYGIPILLRVMNEAWGTSFDINGIHPVVFAIITLGLNAAAYMSEIIR 123 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S+++S+ +GQ +A Y++ +T+ Q + +++PQ + L + FIS+LK TS+ I + Sbjct: 124 SALMSVDEGQVEACYSLNMTKWQALISVVIPQAFVVALPSLGNNFISLLKETSLVFNIAV 183 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +I A+ + + +Y+ +Y ++ +Y + + KIE+ V + Sbjct: 184 VDIMAQARIVGARSYRYFEVYIAVSLIYWVCCMLLERLLAKIETYVRRK 232 >gi|1649036|gb|AAB49428.1| glutamine transport system permease [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 219 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 123/220 (55%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P LL A +TL I+ + L+IG R F + I Sbjct: 1 MQFDW-SAIWPAIPLLLEGA-KMTLWISVLGLAGGLVIGLAAGFARTF-GGWFANHIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ I RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEIIRGTPMVVQVMFIYFALPMAFNDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R++TIRH+ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A YLI+T I ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLEKRMK 217 >gi|307709473|ref|ZP_07645930.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus mitis SK564] gi|307619787|gb|EFN98906.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus mitis SK564] Length = 721 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 129/222 (58%), Gaps = 14/222 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYV 62 W L+ +++ QLL + + +TL +A ISF I+++IG + + + S +IS I +V Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALAIISFAIAIVIGIIFGMFSVSPYKSLRVISEI---FV 558 Query: 63 WIFRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSII 115 + RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I Sbjct: 559 DVIRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQ 618 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+F Sbjct: 619 AVPVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELF 678 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 QT + I++ YQ +Y LA YL++ + + ++E + Sbjct: 679 QTGKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|154686658|ref|YP_001421819.1| YqiY [Bacillus amyloliquefaciens FZB42] gi|154352509|gb|ABS74588.1| YqiY [Bacillus amyloliquefaciens FZB42] Length = 219 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 66/192 (34%), Positives = 119/192 (61%), Gaps = 9/192 (4%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVI 77 + VTL I +S VI L++G +++ +I TI L I FY IFRGTPL++QL +I Sbjct: 18 GLAVTLKIVLVSAVIGLVLGIVLSLFKI---STISPLKWIADFYTSIFRGTPLVLQLMII 74 Query: 78 FYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++G+P + G D F A + +L+LN +AY+SEIIR+ I +I KGQ +A+ A+G+ + + Sbjct: 75 YFGMPQLLGFQIDQFWAAVTALSLNSAAYVSEIIRAGINAIDKGQKEAAVALGVPYGKMM 134 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY---QPLIIYC 193 + ++LPQ + + +E I++ K +++ + I + +I + A + + TY +PLI+ Sbjct: 135 KDLLLPQAFKNISPAIINELITLTKESAIVTVIGLGDIMRRAYQSGAATYNYLEPLIVAG 194 Query: 194 ELAFVYLILTSF 205 + +V +++ +F Sbjct: 195 LIYYVLVLILAF 206 >gi|229591464|ref|YP_002873583.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229363330|emb|CAY50452.1| putative permease component of ABC transporter [Pseudomonas fluorescens SBW25] Length = 276 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 129/213 (60%), Gaps = 4/213 (1%) Query: 4 EWFNLI-IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL-IMHFY 61 +W NL+ + PQ +TL + S +SL +GF A+ R+ S++ ++ I FY Sbjct: 55 KWQNLVGLHLSPQGFLQGAALTLFLCFCSIWLSLALGFATALARL--SNSAVAFGIASFY 112 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 FRGTPLL+Q+ +I+ GLP +G+V + A II+L+LN+ AY+SEI R+ I+ + +GQ Sbjct: 113 ASFFRGTPLLIQILLIYLGLPQLGVVPGAISAGIIALSLNYGAYLSEIFRAGILGVSQGQ 172 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ A+G+ R T I+LPQ + T P +S+FIS+LK +S+ S + + E+ AQ Sbjct: 173 RNAASALGMGRAVTFWQIVLPQAMRTIIPPTTSQFISMLKDSSLVSVMGVWEVMFLAQSY 232 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 ++Y+ + + A +Y +L+ +IQ ++E Sbjct: 233 GRSSYRYIEMLTTAAVIYWLLSIGLELIQARLE 265 >gi|297156640|gb|ADI06352.1| amino acid ABC transporter [Streptomyces bingchenggensis BCW-1] Length = 337 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/232 (31%), Positives = 123/232 (53%), Gaps = 21/232 (9%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 +EW + Q+ I T+ + ++ I + G F+AV R+ + ++S + Y Sbjct: 69 NFEWGTVGAYFGAQVFGQGIATTVELTVVAMAIGTVGGVFVAVGRMS-ENRVLSTVCGAY 127 Query: 62 VWIFRGTPLLVQLFVIFYGL----PHI--GIVFDS-------------FVAIIISLTLNF 102 VW FRG P+LVQL + +Y L P I GI F + A I+ L LN Sbjct: 128 VWFFRGIPVLVQL-IFWYNLSALLPRISFGIPFGPEFISAETNTLISPWFAAILGLGLNE 186 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY++EI+R ++ + GQ +A+ A+G+ R + +R I+LPQ + P S+ I++LK+ Sbjct: 187 AAYMAEIVRGGLLGVDHGQTEAASALGMGRARILRRIVLPQAMRFIVPPTGSQVINMLKA 246 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+ S I + ++ TAQ I + T++ + + YL++TS Y+ Q IE Sbjct: 247 TSLVSVIALADLLYTAQSIYNRTFETIPLLVVACLWYLVMTSVLYVGQSFIE 298 >gi|134278595|ref|ZP_01765309.1| ABC polar amino acid family transporter, inner membrane subunit [Burkholderia pseudomallei 305] gi|134250379|gb|EBA50459.1| ABC polar amino acid family transporter, inner membrane subunit [Burkholderia pseudomallei 305] Length = 218 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 118/212 (55%), Gaps = 7/212 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 LL+AA L ++ I+F+ + G + +R+ + I+ YV +F+GTPLL+QL Sbjct: 12 NLLFAARWTVL-LSLIAFLGGGVTGLVLLAMRVS-PRPWLRRIVILYVELFQGTPLLMQL 69 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F+ F+GLP +G+ +VA ++LTL AY+++I R + ++P+GQW A+ ++G+T Q Sbjct: 70 FLGFFGLPLLGVDVSPWVAATVTLTLYTGAYLADIWRGCVEAVPQGQWSAAASLGMTWTQ 129 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 +R+++ PQ + P + ++KST++ S I + E+ +T I + ++P IY Sbjct: 130 QLRYVVWPQAWKIAVPPTVGFLVQVVKSTALTSIIGLTELTKTGTMITNAAFRPFPIYAM 189 Query: 195 LAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 +A +Y F + + V + Y V + Sbjct: 190 VALLY-----FAMCFPLTWYARVLERRYHVGR 216 >gi|298530983|ref|ZP_07018384.1| polar amino acid ABC transporter, inner membrane subunit [Desulfonatronospira thiodismutans ASO3-1] gi|298509006|gb|EFI32911.1| polar amino acid ABC transporter, inner membrane subunit [Desulfonatronospira thiodismutans ASO3-1] Length = 218 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/200 (32%), Positives = 115/200 (57%), Gaps = 3/200 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + ++ + PQL+ + +T+ I + + +G +I + + +I+ YVWI Sbjct: 5 YEFVLSTLPQLM-QGVKLTIHITVYGLLGGMALGVLTGLI-LAYRIPVINYAGAIYVWIV 62 Query: 66 RGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTP++VQ +++ LP +GI A I+ L +N AYI+EI+R +++SI KG DA Sbjct: 63 RGTPIVVQAMFVYFALPLAMGIRMTGVYAAILVLAINAGAYIAEIVRGAVLSINKGYVDA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+GL+R Q R+I+ P PL ++FI LK TS+ I + E+ + Q I+++ Sbjct: 123 GLALGLSRFQVTRYIVGPLAFRRMIPPLGNQFIIGLKDTSLFIVIGVGELTRQGQEIMAS 182 Query: 185 TYQPLIIYCELAFVYLILTS 204 +++ L ++ +A +YL+LT+ Sbjct: 183 SFRALEVWTAVAIIYLVLTT 202 >gi|15966713|ref|NP_387066.1| putative amino-acid transport system permease ABC transporter protein [Sinorhizobium meliloti 1021] gi|307300252|ref|ZP_07580032.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|15075985|emb|CAC47539.1| Putative DL-2-aminoadipic acid ABC transporter, permease component [Sinorhizobium meliloti 1021] gi|306904418|gb|EFN35002.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 323 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 121/210 (57%), Gaps = 1/210 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F I L+ +V TL I+ IS ++ +I A+ ++ + I L FY +F Sbjct: 107 FAFIAKKLSFLISQGVVTTLYISVISIAVATVIALVGAIAKLSKNGVIYGL-ATFYTSLF 165 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG PLL+Q+++I+ GLP +G V + A I++L+L + AY++EI R+ I SIP+GQ + + Sbjct: 166 RGLPLLMQIYIIYLGLPQVGYVISAVPAGILALSLCYGAYMTEIFRAGIESIPRGQTEGA 225 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL+ QT+ +ILPQ + P ++FI++LK +S+ S + + E+ A+ T Sbjct: 226 TALGLSPSQTMGLVILPQAMRVIIPPTGNQFIAMLKDSSLISVVGVWELMYLARTQGQTE 285 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIES 215 ++ + + + +Y IL+ +Q ++E+ Sbjct: 286 FRHIEMLITASMIYWILSIGLEYMQSRVEA 315 >gi|332703512|ref|ZP_08423600.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio africanus str. Walvis Bay] gi|332553661|gb|EGJ50705.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio africanus str. Walvis Bay] Length = 272 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 120/204 (58%), Gaps = 6/204 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS-LIMHFYVWIFRGTPLLVQLF 75 L + VTL I V++ ++G A++R+ S +I+ L+ Y+ R TPLL+Q+ Sbjct: 70 LLQGLAVTLKITASGLVLATLLGVTTALLRL--SSSIVGRLLATAYLETVRNTPLLIQIL 127 Query: 76 VIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 I++ L P +GI + I++LTL AY SEIIR+ I+S+ +GQW+A+Y++GL+R Q Sbjct: 128 FIYFALSPVLGI--GGLASGILALTLFEGAYASEIIRAGIVSVERGQWEAAYSLGLSRTQ 185 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 ++LPQ + PL+S+ +S++K +++ STI + E+ Q IV+ T+ ++ Sbjct: 186 AYVRVVLPQALRRMLPPLTSQAVSLVKDSALVSTIAVHELTMQGQIIVADTFLTFEVWFT 245 Query: 195 LAFVYLILTSFCYIIQIKIESSVT 218 +A +YL L + + +E +T Sbjct: 246 VAAMYLFLNTVLSLAASGLERRMT 269 >gi|57867284|ref|YP_188964.1| amino acid ABC transporter permease/amino acid-binding protein [Staphylococcus epidermidis RP62A] gi|251811199|ref|ZP_04825672.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis BCM-HMP0060] gi|282875757|ref|ZP_06284624.1| ABC transporter, permease protein [Staphylococcus epidermidis SK135] gi|57637942|gb|AAW54730.1| amino acid ABC transporter, permease/amino acid-binding protein, putative [Staphylococcus epidermidis RP62A] gi|251805280|gb|EES57937.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis BCM-HMP0060] gi|281294782|gb|EFA87309.1| ABC transporter, permease protein [Staphylococcus epidermidis SK135] gi|329734283|gb|EGG70598.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU045] gi|329737224|gb|EGG73478.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU028] Length = 485 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/187 (34%), Positives = 112/187 (59%), Gaps = 6/187 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVI 77 I T+ I+ + V+ I+G FIA+++I I L I Y+ RGTP+LVQ+F++ Sbjct: 284 GIKNTILISLVGVVLGSILGSFIALLKI---SKIRPLQWIASIYIEFLRGTPMLVQVFIV 340 Query: 78 FYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 F+G +G+ + + I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL +QT+ Sbjct: 341 FFGTTAALGLDISALICGTIALVINSSAYIAEIIRAGINAVDKGQTEAARSLGLNYRQTM 400 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 + +++PQ I L +EF++++K +S+ STI + EI AQ + ++ P A Sbjct: 401 QSVVMPQAIKKILPALGNEFVTLIKESSIVSTIGVSEIMFNAQVVQGISFDPFTPLLVAA 460 Query: 197 FVYLILT 203 +Y +LT Sbjct: 461 LLYFLLT 467 >gi|148550099|ref|YP_001270201.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida F1] gi|148514157|gb|ABQ81017.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida F1] Length = 320 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 117/198 (59%), Gaps = 6/198 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ +S + L+IG F + R+ + T+ L YV + RGTPLLVQ+F+ ++ Sbjct: 125 TLWISVVSGALGLVIGLFAGLCRLSNNPTLRDLST-VYVELVRGTPLLVQIFIFYF---F 180 Query: 84 IGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IG V + A + +L L AY++EI+R+ + SI KGQ +A+ ++GL Q++RH+IL Sbjct: 181 IGTVLNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNAGQSMRHVIL 240 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ PL+ +FIS++K TS+ S I I E+ ++ + ++T++ I+ +A +YL+ Sbjct: 241 PQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWFCVAGLYLL 300 Query: 202 LTSFCYIIQIKIESSVTQ 219 + I ++E + Q Sbjct: 301 INLPLSHIASRLERRLAQ 318 >gi|313500999|gb|ADR62365.1| Polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida BIRD-1] Length = 320 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 117/198 (59%), Gaps = 6/198 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ +S + L+IG F + R+ + T+ L YV + RGTPLLVQ+F+ ++ Sbjct: 125 TLWISVVSGALGLVIGLFAGLCRLSNNPTLRDLST-VYVELVRGTPLLVQIFIFYF---F 180 Query: 84 IGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IG V + A + +L L AY++EI+R+ + SI KGQ +A+ ++GL Q++RH+IL Sbjct: 181 IGTVLNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNAGQSMRHVIL 240 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ PL+ +FIS++K TS+ S I I E+ ++ + ++T++ I+ +A +YL+ Sbjct: 241 PQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWFCVAGLYLL 300 Query: 202 LTSFCYIIQIKIESSVTQ 219 + I ++E + Q Sbjct: 301 INLPLSHIASRLERRLAQ 318 >gi|255284108|ref|ZP_05348663.1| glutamine ABC transporter, permease protein [Bryantella formatexigens DSM 14469] gi|255265365|gb|EET58570.1| glutamine ABC transporter, permease protein [Bryantella formatexigens DSM 14469] Length = 230 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 113/202 (55%), Gaps = 5/202 (2%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHF 60 + N I D + L + TL + + +I + IGF +AV+R + T +++ + Sbjct: 10 YLNFIADDRWKYLTNGLKTTLIVTVFAVLIGIAIGFLVAVVRSTYDKTKKLKVLNALCKL 69 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + RGTP++VQL +I++ + + D + I++ LN AY++EIIRS I+SI G Sbjct: 70 YLTVIRGTPVVVQLLIIYF-VIFGSVRIDKTIVAILAFGLNSGAYVAEIIRSGIMSIDNG 128 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A ++G QT+ +I+LPQ + L +EFI +LK TSVA I + ++ + Sbjct: 129 QFEAGRSLGFNYVQTMIYIVLPQALKNVLPALGNEFIVLLKETSVAGYIALEDLTKGGDI 188 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 I S TY + +A +YL++ Sbjct: 189 IRSRTYDAFMPLIAVALIYLVM 210 >gi|26991699|ref|NP_747124.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida KT2440] gi|24986800|gb|AAN70588.1|AE016701_8 amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] Length = 320 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 117/198 (59%), Gaps = 6/198 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ +S + L+IG F + R+ + T+ L YV + RGTPLLVQ+F+ ++ Sbjct: 125 TLWISVVSGALGLVIGLFAGLCRLSNNPTLRDLST-VYVELVRGTPLLVQIFIFYF---F 180 Query: 84 IGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IG V + A + +L L AY++EI+R+ + SI KGQ +A+ ++GL Q++RH+IL Sbjct: 181 IGTVLNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNAGQSMRHVIL 240 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ PL+ +FIS++K TS+ S I I E+ ++ + ++T++ I+ +A +YL+ Sbjct: 241 PQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWFCVAGLYLL 300 Query: 202 LTSFCYIIQIKIESSVTQ 219 + I ++E + Q Sbjct: 301 INLPLSHIASRLERRLAQ 318 >gi|332074851|gb|EGI85323.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA41301] Length = 721 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 128/222 (57%), Gaps = 14/222 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYV 62 W L+ +++ QLL + + +TL +A ISF I+++IG + + S +IS I +V Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGTFSVSPYKSLRVISEI---FV 558 Query: 63 WIFRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSII 115 + RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I Sbjct: 559 DVIRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQ 618 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+F Sbjct: 619 AVPVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELF 678 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 QT + I++ YQ +Y LA YL++ + + ++E + Sbjct: 679 QTGKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|307945342|ref|ZP_07660678.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Roseibium sp. TrichSKD4] gi|307771215|gb|EFO30440.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Roseibium sp. TrichSKD4] Length = 303 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 124/225 (55%), Gaps = 12/225 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ ++ + Q ++VTL I +S + + IA R I S + +V+ F Sbjct: 78 FDSYLERYGQKYIDGLIVTLQIVGLSLLFGAALSIPIAAARSS-KWKIFSWPAYGFVYFF 136 Query: 66 RGTPLLVQLFVIFYG-------LPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSII 115 RGTPL+ Q F+I+YG L IG+ + D+F ++ + TLN +AY +EI+R ++ Sbjct: 137 RGTPLIAQTFLIYYGFGSFRPELQSIGLWWFFRDAFYCVVFAFTLNTAAYQAEILRGAVQ 196 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ +GQW+ + A+GL++ T IILPQ + + P +E I ++K +++A+ +T+ ++F Sbjct: 197 NVARGQWEGAAALGLSKPVTFFKIILPQALIVALRPYGNEIILMIKGSAIAAIVTVFDMF 256 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +R S TY Y A +YL++ I K+E+ +T+H Sbjct: 257 AETKRAYSRTYD-FQAYIWAAVLYLMIVETLRRIWDKLEARLTRH 300 >gi|116617768|ref|YP_818139.1| ABC-type amino acid transport system, permease and periplasmic component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096615|gb|ABJ61766.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 490 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 59/154 (38%), Positives = 98/154 (63%), Gaps = 2/154 (1%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEII 110 + I+ +I + YV RGTPLLVQ F++F+G IG+ +F A +++ LN +AY++EII Sbjct: 319 NAILRIIGNVYVEYVRGTPLLVQAFMVFFGTQVIGLNLSAFAAGALAMGLNSAAYVAEII 378 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 RS I S+ GQ +AS ++GL++ +T+R++ILPQ + L +EF++I+K SV S I Sbjct: 379 RSGINSVDFGQTEASRSLGLSKGKTMRYVILPQAVKNILPALGNEFVTIIKEGSVVSVIG 438 Query: 171 IPEI-FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + E+ FQT + +++P + +Y +LT Sbjct: 439 VGELMFQTGV-VQGASFKPFFPLVIASLIYFVLT 471 >gi|119383037|ref|YP_914093.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Paracoccus denitrificans PD1222] gi|119372804|gb|ABL68397.1| hydroxyectoine ABC transporter membrane protein / ectoine ABC transporter membrane protein [Paracoccus denitrificans PD1222] Length = 219 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 109/187 (58%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + P LL A +TL + +++ ++G A++R + +++ F Sbjct: 1 MEWDW-DFAWSIMPTLL-AGFRITLIATVLGAMVAAVLGLVFAILR-RSPNRLVARTTGF 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V RGTPLLVQL+ IFY LP +GI + A +I + L+++ Y +E+ R I ++P+G Sbjct: 58 VVEFIRGTPLLVQLYFIFYVLPDLGIRLPALTAGVIGMGLHYATYAAEVYRGGIEAVPRG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A LT +QT H++LPQ + +++ +++ K T + S IT+ E+ A+ Sbjct: 118 QWEAAKATNLTTRQTWLHVVLPQAVPPMIPAMANYLLAMFKETPLLSAITVLELMNQAKS 177 Query: 181 IVSTTYQ 187 + +++Y+ Sbjct: 178 VANSSYR 184 >gi|322616304|gb|EFY13213.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619554|gb|EFY16429.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622750|gb|EFY19595.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628662|gb|EFY25449.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631599|gb|EFY28355.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637126|gb|EFY33829.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641674|gb|EFY38310.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644531|gb|EFY41071.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648465|gb|EFY44917.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654200|gb|EFY50523.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658115|gb|EFY54382.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663589|gb|EFY59791.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670325|gb|EFY66465.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671561|gb|EFY67683.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676917|gb|EFY72984.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682842|gb|EFY78861.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686521|gb|EFY82503.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194582|gb|EFZ79775.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199087|gb|EFZ84183.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202042|gb|EFZ87101.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208932|gb|EFZ93869.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213917|gb|EFZ98687.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215231|gb|EFZ99976.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220849|gb|EGA05287.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227291|gb|EGA11459.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229909|gb|EGA14032.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233134|gb|EGA17230.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240869|gb|EGA24911.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243186|gb|EGA27206.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248725|gb|EGA32653.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251729|gb|EGA35596.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257541|gb|EGA41229.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261456|gb|EGA45037.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267887|gb|EGA51366.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272046|gb|EGA55461.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 219 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 126/223 (56%), Gaps = 11/223 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF---FSDTIISLI 57 M+++W + I + P LL A +TL I+ + L+IG R F F++ I L Sbjct: 1 MQFDW-SAIWPAIPLLLEGA-KMTLWISVLGLAGGLVIGLAAGFARTFGGWFANHIALL- 57 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 ++ I RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++ Sbjct: 58 ---FIEIIRGTPIVVQVMFIYFALPMAFNDLRIDPFSAAVVTIMINSGAYIAEITRGAVL 114 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SI KG +A A+GL+R++TIRH+ILP + PL +++I +K TS+ I + E+ Sbjct: 115 SIHKGFREAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELT 174 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 + Q I++ ++ L I+ +A YLI+T I ++E + Sbjct: 175 RQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMK 217 >gi|27468459|ref|NP_765096.1| glutamine-binding periplasmic protein [Staphylococcus epidermidis ATCC 12228] gi|27316006|gb|AAO05140.1|AE016749_86 glutamine-binding periplasmic protein [Staphylococcus epidermidis ATCC 12228] Length = 485 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/187 (34%), Positives = 112/187 (59%), Gaps = 6/187 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVI 77 I T+ I+ + V+ I+G FIA+++I I L I Y+ RGTP+LVQ+F++ Sbjct: 284 GIKNTILISLVGVVLGSILGSFIALLKI---SKIRPLQWIASIYIEFLRGTPMLVQVFIV 340 Query: 78 FYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 F+G +G+ + + I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL +QT+ Sbjct: 341 FFGTTAALGLDISALICGTIALVINSSAYIAEIIRAGINAVDKGQTEAARSLGLNYRQTM 400 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 + +++PQ I L +EF++++K +S+ STI + EI AQ + ++ P A Sbjct: 401 QSVVMPQAIKKILPALGNEFVTLIKESSIVSTIGVSEIMFNAQVVQGISFDPFTPLLVAA 460 Query: 197 FVYLILT 203 +Y +LT Sbjct: 461 LLYFLLT 467 >gi|107023048|ref|YP_621375.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116686711|ref|YP_839958.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|170735480|ref|YP_001774594.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|254250728|ref|ZP_04944047.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia cenocepacia PC184] gi|105893237|gb|ABF76402.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia cenocepacia AU 1054] gi|116652426|gb|ABK13065.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia cenocepacia HI2424] gi|124879862|gb|EAY67218.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia cenocepacia PC184] gi|169821518|gb|ACA96099.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 216 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 63/184 (34%), Positives = 111/184 (60%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ +SFV ++G + V+R+ S T++ I Y+ +F+GTPLL+QLF++F+GLP Sbjct: 20 TIVLSIVSFVTGGLVGLGLLVMRVSGS-TVLRGIAKLYIEVFQGTPLLMQLFIVFFGLPL 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ +VA LT SAY++EI R + ++PKGQW+AS ++ ++ + +RH+ILPQ Sbjct: 79 VGLDVPPWVAATAGLTFFTSAYLAEIWRGCVEAVPKGQWEASASLAMSYVEQLRHVILPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + P + +K T++ S I E+ + I + T++P ++Y +A +Y L Sbjct: 139 AARIAIAPTVGFGVQAVKDTALVSIIGFTELTKVGIAISNATFRPFVVYGLVALIYFAL- 197 Query: 204 SFCY 207 CY Sbjct: 198 --CY 199 >gi|332283640|ref|YP_004415551.1| polar amino acid ABC transporter, inner membrane subunit [Pusillimonas sp. T7-7] gi|330427593|gb|AEC18927.1| polar amino acid ABC transporter, inner membrane subunit [Pusillimonas sp. T7-7] Length = 217 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 66/179 (36%), Positives = 111/179 (62%), Gaps = 1/179 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ ++FV I+G IA+ R S +L M F + +FRGTPLL+QLF++F+G P Sbjct: 19 TIALSLMAFVGGGIVGLIIALSRTSESKLAQALSMGF-IQLFRGTPLLLQLFLVFFGAPV 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 IG+ + + A ++LTLN A++ EI R I +IP GQW+A+ A+GL + +R ++LPQ Sbjct: 78 IGLDINPWFAAAVALTLNSGAFLGEIWRGCIQAIPSGQWEAAEALGLNYRHKMRDVVLPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + + P + I+K TS+A+ I E+ + Q I + T+QP++++ +A +Y L Sbjct: 138 ALKIAVPPTVGYLVQIVKGTSLAAIIGFTELTRAGQIINNATFQPMMVFTVVAIIYFFL 196 >gi|260429908|ref|ZP_05783883.1| ABC polar amino acid family transporter, inner membrane subunit [Citreicella sp. SE45] gi|260418831|gb|EEX12086.1| ABC polar amino acid family transporter, inner membrane subunit [Citreicella sp. SE45] Length = 296 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 78/221 (35%), Positives = 119/221 (53%), Gaps = 23/221 (10%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 PQ+L + +TL + + V+ +IG +AV+R+ +D I++ +VW FRGTP+LVQ Sbjct: 64 PQVLRG-VGMTLWLTLLVMVMGTVIGIIVAVMRLS-NDRILNGTAVAFVWFFRGTPVLVQ 121 Query: 74 LFVIFYGLPHI------GIVFD--------------SFVAIIISLTLNFSAYISEIIRSS 113 L V +Y L I GI F SF A ++ L N AY++EIIR+ Sbjct: 122 L-VFWYNLAAIFPDVSLGIPFGGPKLFEISATVAISSFTAALLGLGFNEGAYMAEIIRAG 180 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + S+ GQ +AS A+G QT R I+LPQ + P ++ I +LK TS+AS + + E Sbjct: 181 LTSVDHGQTEASRALGHRPAQTFRVIVLPQAMKAIIPPTGNQVIGMLKYTSLASVVALGE 240 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + + + I S T+Q + + A YLIL S ++Q IE Sbjct: 241 LMHSVETIYSRTFQTMPMLIVAALWYLILVSILSVVQYYIE 281 >gi|167036062|ref|YP_001671293.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166862550|gb|ABZ00958.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 320 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 117/198 (59%), Gaps = 6/198 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ +S + L+IG F + R+ + T+ L YV + RGTPLLVQ+F+ ++ Sbjct: 125 TLWISVVSGALGLVIGLFAGLCRLSNNPTLRDLST-VYVELVRGTPLLVQIFIFYF---F 180 Query: 84 IGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IG V + A + +L L AY++EI+R+ + SI KGQ +A+ ++GL Q++RH+IL Sbjct: 181 IGTVLNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNAGQSMRHVIL 240 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ PL+ +FIS++K TS+ S I I E+ ++ + ++T++ I+ +A +YL+ Sbjct: 241 PQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWFCVAGLYLL 300 Query: 202 LTSFCYIIQIKIESSVTQ 219 + I ++E + Q Sbjct: 301 INLPLSHIASRLERRLAQ 318 >gi|332686191|ref|YP_004455965.1| amino acid ABC transporter amino acid-binding/ permease [Melissococcus plutonius ATCC 35311] gi|332370200|dbj|BAK21156.1| amino acid ABC transporter, amino acid-binding/ permease protein [Melissococcus plutonius ATCC 35311] Length = 487 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 62/178 (34%), Positives = 107/178 (60%), Gaps = 3/178 (1%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 +A I + ++IG +A++++ S I I Y+ RGTPLLVQ+F++++G +GI Sbjct: 294 LAFIGVLFGVVIGSLLALMKLSKS-KIFKAIAIIYIEYVRGTPLLVQIFIVYFGSGVLGI 352 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 A ++L LN AY++EIIR+ I +I KGQ +A+ ++G+ Q +R+I+ PQ I Sbjct: 353 ELSKLTAGCMALALNSGAYVAEIIRAGINAINKGQMEAARSLGMNYHQAMRYIVFPQAIK 412 Query: 147 TSAVPLSSEFISILKSTSVASTITIPE-IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +EF++++K +SV S I + E IFQT + +++P + Y ++ +Y LT Sbjct: 413 NILPALGNEFVTVIKESSVVSIIGVSELIFQTGN-VQGASFKPFLPYLIVSLIYFALT 469 >gi|289522552|ref|ZP_06439406.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504388|gb|EFD25552.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 221 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/196 (32%), Positives = 112/196 (57%), Gaps = 2/196 (1%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 LI S P LL V T+ + + + L++G +A + + S T+ +++ Y IFR Sbjct: 7 LIQKSLPTLLEGTFV-TIKLTILIVAMGLVLGLILAFCQTYGSKTL-RIVVAVYDRIFRS 64 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 P LV L ++FYG+P IG+ F A +++L L +AY+ +I R S +S+ Q A+Y+ Sbjct: 65 IPELVLLLLVFYGMPGIGLRLSPFYAAVVALGLRAAAYMGQIFRGSFMSVGSDQLTAAYS 124 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ + ++I PQ + P ++E+ ILK TS+A I + E+ + Q I++ Y+ Sbjct: 125 LGMSEYKAFIYVIFPQAMRAFIPPFANEYAIILKDTSLAYAIGVVELLRQGQYIITVEYE 184 Query: 188 PLIIYCELAFVYLILT 203 PL I+ +A +Y +LT Sbjct: 185 PLPIFLAIAGIYFVLT 200 >gi|269963235|ref|ZP_06177569.1| polar amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3] gi|269832040|gb|EEZ86165.1| polar amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3] Length = 265 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/194 (36%), Positives = 121/194 (62%), Gaps = 4/194 (2%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 + +P L ++VTL I+ IS +L+IGF A++R+ S + + I YV + R TPL Sbjct: 54 EWWPAELVDGLIVTLKISAISLFFTLVIGFVTALLRLSNSK-VGNAIGTTYVEMIRNTPL 112 Query: 71 LVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LVQ++++++ P IG+ D F +++L+L AY +EI R+ + SIPKGQ++A+ +G Sbjct: 113 LVQIYLLYFVFGPVIGL--DRFSTAVLALSLFQGAYTAEIFRAGLNSIPKGQFEAAKTLG 170 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+ + +ILPQ + + PL++E +S++K++S+ S + I ++ A+ IVS T P Sbjct: 171 LSPFFAYKDVILPQVLQRTLPPLTNEVVSLIKNSSIVSVMAIFDLTTEARNIVSETAMPF 230 Query: 190 IIYCELAFVYLILT 203 I+ +A +YL LT Sbjct: 231 EIWFTVAAIYLALT 244 >gi|16262717|ref|NP_435510.1| ABC transporter, permease [Sinorhizobium meliloti 1021] gi|14523343|gb|AAK64922.1| ABC transporter, permease [Sinorhizobium meliloti 1021] Length = 228 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 121/204 (59%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F +++ PQ++ + + +T+ ++ + + +G F AV+ S I L++ Sbjct: 1 MDYTFQFGPLLNYLPQIV-SGLWLTIGLSFVGIFGGIALGIFCAVMSTL-SSPIPRLLVR 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TPLLVQ+FVIF+GLP+IGI ++ I+L LN Y++EI+R I + + Sbjct: 59 LYVEVVRNTPLLVQIFVIFFGLPNIGIRLSPLTSVFIALVLNNGGYVAEIVRGGIEATHR 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q +A+ ++GL+ QT+R++ILP + P+ S+ + ++ STS+ S I + ++ A Sbjct: 119 SQVEAAESLGLSYFQTLRYVILPPALEKVFTPVVSQCVLLMLSTSLVSAIGVEDLTGAAM 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 S T++ + IY +A VY++L Sbjct: 179 IASSETFRTMEIYLVVAMVYVVLN 202 >gi|330502657|ref|YP_004379526.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas mendocina NK-01] gi|328916943|gb|AEB57774.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina NK-01] Length = 232 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 118/207 (57%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N+++DS P L + ++VTL + I+ + L++ +A++R+ +I+ Y ++ Sbjct: 5 YNVVLDSLP-LYFGGVLVTLKLLLIALAVGLLLAVPLAIMRVS-RQKLINFPAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQL++++YGL V ++F+ ++ +N SAY +EI+ S+ + Sbjct: 63 RGTPMLVQLYLLYYGLAQFEAVRETFMWPYLSSATFCACLAFAINTSAYTAEILAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G++R++ + I+LP + + S+E I +L +TS+AS +T+ +I Sbjct: 123 TPPGEIEAAKAMGMSRRKLYQRILLPSALRRALPQYSNEVIMMLHTTSLASAVTLVDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + S Y P Y YL LT Sbjct: 183 AAKTLSSQYYMPFEAYVTAGLFYLALT 209 >gi|328470613|gb|EGF41524.1| amino acid ABC transporter permease protein [Vibrio parahaemolyticus 10329] Length = 265 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 123/193 (63%), Gaps = 6/193 (3%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII-SLIMHFYVWIFRGTPLL 71 +P L ++VTL I+ IS +L++G A++R+ SD+ + ++I YV + R TPLL Sbjct: 56 WPAELIDGLLVTLNISVISLFFTLVLGLVTALLRL--SDSKVGNVIGTTYVEVIRNTPLL 113 Query: 72 VQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 VQ++++++ P IG+ D F +++L+L AY +EI R+ + SIPKGQ++A+ +GL Sbjct: 114 VQIYLLYFVFGPVIGL--DRFSTAVLALSLFQGAYTAEIFRAGLNSIPKGQFEAAQTLGL 171 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + T + +ILPQ + + PL++E +S++K++S+ S + I ++ A+ IVS T P Sbjct: 172 SPFYTYKDVILPQVLQRTLPPLTNEVVSLIKNSSIVSVMAIFDLTTQARNIVSETAMPFE 231 Query: 191 IYCELAFVYLILT 203 I+ +A +YL LT Sbjct: 232 IWFTVAAIYLALT 244 >gi|167036208|ref|YP_001671439.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166862696|gb|ABZ01104.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 221 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 60/179 (33%), Positives = 105/179 (58%), Gaps = 2/179 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I+ + P L A+ VTL + I+ SL++ A + + + + L+ YV + R T Sbjct: 8 ILSTLPAFL-KAVGVTLQVGMIAIATSLLVALVNATLLVLRTPYLWRLV-KAYVELARNT 65 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++ LP +G+ F A II++T AY++E++R+ I ++P+ Q ++ +I Sbjct: 66 PLLIQLFFVYFALPSLGLKISGFSAAIITMTFMGGAYLTEVLRAGIEAVPRAQLESGRSI 125 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GL+ Q +RH++LPQ S L + FI +LK T+V S + +PEI T + ++ Y+ Sbjct: 126 GLSEGQLLRHVVLPQAGILSLPALFANFIFLLKETTVVSAVAVPEILYTTKNYIALYYK 184 >gi|153855472|ref|ZP_01996603.1| hypothetical protein DORLON_02617 [Dorea longicatena DSM 13814] gi|149752126|gb|EDM62057.1| hypothetical protein DORLON_02617 [Dorea longicatena DSM 13814] Length = 227 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 79/206 (38%), Positives = 121/206 (58%), Gaps = 10/206 (4%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 LL + +T+ ++ ++F++S+I+G +A+I+ F I+S + YV FRGTPLL+QLF Sbjct: 18 LLLEGLWITIYVSALAFLLSIILGAILAIIQ-HFRVKILSQLAKVYVSYFRGTPLLIQLF 76 Query: 76 VIFYGLPHIGIVFD------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 + +YGLP +VFD A+++ L LN +AYISE IR +I S+ KGQ++AS A G Sbjct: 77 LFYYGLP---MVFDVMKRCPKTFALVLCLGLNSAAYISESIRGAIESVDKGQYEASIAFG 133 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 LT Q + IILPQ + P+ + + I+K +S+ TI I +I AQ +T Y+ Sbjct: 134 LTHPQMMLKIILPQAAVAAIPPIVNSCLDIIKMSSLGMTIGIQDIMGEAQLTAATYYKTF 193 Query: 190 IIYCELAFVYLILTSFCYIIQIKIES 215 Y A Y IL ++Q K+E Sbjct: 194 ETYILAAVFYWILAIVLGVVQKKVEK 219 >gi|119383469|ref|YP_914525.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119373236|gb|ABL68829.1| amino acid ABC transporter membrane protein 1, PAAT family [Paracoccus denitrificans PD1222] Length = 215 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/193 (36%), Positives = 112/193 (58%), Gaps = 6/193 (3%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI--FRG 67 + SF L +AA TL I+ + + L+IG + R+ L +W+ RG Sbjct: 8 LQSFEPLFWAA-RYTLLISGLGIALGLVIGTLVCAARL---SPYAPLRGFAAIWVSFLRG 63 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PLLVQL V +Y LP IGI + A ++++ + SAYISEI R +I ++P+GQ +A+ A Sbjct: 64 VPLLVQLLVFYYTLPVIGIDVPAIFAAVVTVGICASAYISEIWRGAIAALPRGQAEAAVA 123 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 IG+T + T +ILPQ T S L +E I ++K++S+ S + I E+ + +Q +TT++ Sbjct: 124 IGMTPRDTWTRVILPQAFTMSLPALVNELILLVKASSLVSVVGILELTRASQAQAATTFR 183 Query: 188 PLIIYCELAFVYL 200 PL +Y A +YL Sbjct: 184 PLEVYLAAACIYL 196 >gi|293366163|ref|ZP_06612849.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis M23864:W2(grey)] gi|291319685|gb|EFE60045.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis M23864:W2(grey)] Length = 472 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/187 (34%), Positives = 112/187 (59%), Gaps = 6/187 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVI 77 I T+ I+ + V+ I+G FIA+++I I L I Y+ RGTP+LVQ+F++ Sbjct: 271 GIKNTILISLVGVVLGSILGSFIALLKI---SKIRPLQWIASIYIEFLRGTPMLVQVFIV 327 Query: 78 FYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 F+G +G+ + + I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL +QT+ Sbjct: 328 FFGTTAALGLDISALICGTIALVINSSAYIAEIIRAGINAVDKGQTEAARSLGLNYRQTM 387 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 + +++PQ I L +EF++++K +S+ STI + EI AQ + ++ P A Sbjct: 388 QSVVMPQAIKKILPALGNEFVTLIKESSIVSTIGVSEIMFNAQVVQGISFDPFTPLLVAA 447 Query: 197 FVYLILT 203 +Y +LT Sbjct: 448 LLYFLLT 454 >gi|239631652|ref|ZP_04674683.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526117|gb|EEQ65118.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 218 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 59/171 (34%), Positives = 104/171 (60%), Gaps = 5/171 (2%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL----IMHFYVWIFRGT 68 P LL + + +TL I I+ + S+ +G ++V I +I+ ++ YVW+FRGT Sbjct: 8 LPALL-SGVKMTLGIFAITLIGSIPLGLILSVGLIPKPKSILGKAGKGLLEGYVWVFRGT 66 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QL IFYGLP IG+VFD F A +++ LN++ Y +EI R +I +GQ++AS + Sbjct: 67 PLLLQLMFIFYGLPIIGLVFDRFSAALVAFILNYATYFAEIFRGGFGAIDEGQFEASTVL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +TR Q +R++++PQ + + +E I+++K +S+ I + ++ + Sbjct: 127 NMTRWQALRYVVIPQVVKIVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGN 177 >gi|327393260|dbj|BAK10682.1| glutamine ABC transporter permease protein GlnP [Pantoea ananatis AJ13355] Length = 219 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 126/220 (57%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W ++I + P LL A +TL I+ I V LIIG R + I + I Sbjct: 1 MEFDW-SVIWPAMPALLEGA-KMTLIISIIGLVGGLIIGLVAGFARAY-GGWISNHIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ I RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEIIRGTPIVVQVMFIYFALPMAFPDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIN 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+ ++T+R++I+P + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSSRETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A +YL++T + +IE V Sbjct: 178 QEIIAGNFRALEIWSAVAIIYLVITLVLSFVLRRIEKRVK 217 >gi|91224517|ref|ZP_01259779.1| hypothetical amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] gi|269968272|ref|ZP_06182298.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|91190859|gb|EAS77126.1| hypothetical amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] gi|269827129|gb|EEZ81437.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 315 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/179 (33%), Positives = 115/179 (64%), Gaps = 6/179 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +V T+ I+ S +I+L +G + ++RI S+ + + YV + RGTPLLVQ+F++++ Sbjct: 116 GVVTTIKISLWSLIIALALGLVVGLMRIS-SNPALKKLALVYVEVIRGTPLLVQIFIVYF 174 Query: 80 GLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 IG V D F A +I+L++ +AY++EI+RS I SIP+GQ +A+ ++G+ + + Sbjct: 175 ---FIGTVLDLERFTAGVIALSVFTAAYVAEIVRSGIQSIPRGQMEAARSLGMNYPKAMI 231 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 ++ILPQ + PL+ +FI+++K +S+ S I+I ++ + + +VS ++ P ++ +A Sbjct: 232 YVILPQAFKQTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSGSFAPFEVWFTVA 290 >gi|322387683|ref|ZP_08061292.1| amino acid ABC superfamily ATP binding cassette transporter [Streptococcus infantis ATCC 700779] gi|321141550|gb|EFX37046.1| amino acid ABC superfamily ATP binding cassette transporter [Streptococcus infantis ATCC 700779] Length = 481 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 125/220 (56%), Gaps = 10/220 (4%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+ +++ QLL + + +TL +A +SF I+++IG + + + LI +V + Sbjct: 264 W-GLLKNNYRQLL-SGLGITLALALVSFAIAIVIGIIFGMFSVSPYKPL-RLIAEIFVDV 320 Query: 65 FRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 RG PL++ IF+G+P+ + FVA I+L+LN +AYI+EI+R I ++ Sbjct: 321 IRGIPLMILAAFIFWGIPNFIESLTGQQSPINDFVAGTIALSLNSAAYIAEIVRGGIKAV 380 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +AS ++G++ +T+R I+LPQ ++F+ LK T++ S I + E+FQT Sbjct: 381 PVGQMEASRSLGISYGKTMRKIVLPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQT 440 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + I++ YQ +Y LA YL++ + + ++E + Sbjct: 441 GKIIIARNYQSFKMYAILAVFYLVIITLLTRLAKRLEKRI 480 >gi|171779323|ref|ZP_02920287.1| hypothetical protein STRINF_01168 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281940|gb|EDT47371.1| hypothetical protein STRINF_01168 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 213 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 117/207 (56%), Gaps = 9/207 (4%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRGTPLL 71 P LL A VTL + CI V+S+ IG +A +++I F + ++ YVWI RGTPLL Sbjct: 8 LPSLLDGA-AVTLQVFCIVIVLSIPIGAILAFLMQIKFKP--LQWLLTLYVWIMRGTPLL 64 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +QL +Y LP +G+V D A I++ TLN++AY +EI R I +IPKGQ++A+ + L Sbjct: 65 LQLIFFYYVLPSVGVVMDRMPAAILAFTLNYAAYFAEIFRGGIAAIPKGQYEAAKVLKLN 124 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTYQPL 189 + QTI +IILPQ + +E I+++K +S+ + + ++ ++ + T P+ Sbjct: 125 QLQTIHYIILPQVFKIVLPSVFNEIINLVKDSSLVYVLGVGDLLLASKTAANRDATLAPM 184 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESS 216 + +YL++ +I + E Sbjct: 185 FVAGA---IYLLMIGIVILISKQTEKK 208 >gi|49183380|ref|YP_026632.1| amino acid ABC transporter permease [Bacillus anthracis str. Sterne] gi|49177307|gb|AAT52683.1| amino acid ABC transproter, permease [Bacillus anthracis str. Sterne] Length = 291 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/187 (34%), Positives = 112/187 (59%), Gaps = 3/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A IV TL + S V+ +IG A RI ++ +++ I H Y+ I Sbjct: 63 FEIFMSTYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-NNKVLNSIAHVYIAII 120 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 121 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAA 179 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 180 RSLGMPYPLAMRRIVLPQAFRQSLPPLGNQFIIGLKDSSLVAYVGMAELWGSGLSIAAGN 239 Query: 186 YQPLIIY 192 +Q L Y Sbjct: 240 FQQLDTY 246 >gi|322411105|gb|EFY02013.1| putative glutamine-binding periplasmic protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 522 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 106/191 (55%), Gaps = 10/191 (5%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISLIMHFYVWIFRGTPLLVQ 73 +TL I+ + + L IG I + R + +++ Y+ IFRGTP++VQ Sbjct: 298 MTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLNIYIEIFRGTPMIVQ 357 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 VI+YG GI D +A I +++N AY+SEI+R I ++ KGQ++A+ A+G T Sbjct: 358 SMVIYYGTAQAFGISIDRTLAAIFIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTH 417 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+R I+LPQ + +EF+ +K TSV + I++ E++ + + + TYQ + Sbjct: 418 GQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTF 477 Query: 193 CELAFVYLILT 203 +A +Y +LT Sbjct: 478 TIIAIIYFVLT 488 >gi|15903163|ref|NP_358713.1| amino acid ABC transporter permease/amino acid-binding protein [Streptococcus pneumoniae R6] gi|15458747|gb|AAK99923.1| ABC transporter membrane spanning permease - glutamine transport [Streptococcus pneumoniae R6] Length = 721 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 133/223 (59%), Gaps = 16/223 (7%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYV 62 W L+ +++ QLL + + +TL +A ISF I+++IG + + + S +IS I +V Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEI---FV 558 Query: 63 WIFRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSII 115 + RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I Sbjct: 559 DVIRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQ 618 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP-LSSEFISILKSTSVASTITIPEI 174 ++P GQ +AS ++G++ +T+R IILPQ +T +P ++F+ LK T++ S I + E+ Sbjct: 619 AVPVGQMEASRSLGISYGKTMRKIILPQ-VTKLMLPNFVNQFVIALKDTTIVSAIGLVEL 677 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 FQT + I++ YQ +Y LA YL++ + + ++E + Sbjct: 678 FQTGKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|241205166|ref|YP_002976262.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859056|gb|ACS56723.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 220 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/196 (34%), Positives = 108/196 (55%), Gaps = 9/196 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EW L++ A+V T ++ +F ++ + G +++ + S + YV Sbjct: 14 EWLPLLLR--------AMVNTALLSVCAFALAFVFGLLLSLCQKS-SFAALRYFAALYVT 64 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I RG PLL LF+I++GLP +GIV D+F A I L L F+A ++E+ R+ + +IP GQ + Sbjct: 65 IVRGVPLLAVLFLIYFGLPGVGIVLDAFGAAIAGLALCFAAQVAELFRAGLKAIPAGQSE 124 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A G T Q+ IILPQ P+ F+S+LK +S+AS IT+ E+ T + + + Sbjct: 125 AALAAGFTPAQSFVLIILPQVARVILAPMIITFVSLLKDSSLASLITVNELVLTGRSMAT 184 Query: 184 TTYQPLIIYCELAFVY 199 + PL IY + Y Sbjct: 185 EYFLPLQIYIAVGLCY 200 >gi|239637861|ref|ZP_04678822.1| glutamine-binding periplasmic protein [Staphylococcus warneri L37603] gi|239596424|gb|EEQ78960.1| glutamine-binding periplasmic protein [Staphylococcus warneri L37603] Length = 486 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 110/182 (60%), Gaps = 4/182 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRI-FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL- 81 T+ I+ + V I+G FIA++++ F +S I Y+ RGTPLLVQ+F++F+G Sbjct: 289 TILISFVGVVFGAILGAFIALMKLSKFKP--LSWIASIYIEFLRGTPLLVQVFIVFFGTT 346 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 +G+ + + I+L +N SAYI+EI R+ I SI KGQ +A+ ++GL+ QT++ +++ Sbjct: 347 AALGLDISALICGTIALVINSSAYIAEIFRAGINSIDKGQTEAARSLGLSYNQTMKSVVM 406 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ I L +EF++++K +S+ STI + EI AQ + ++ P A +Y I Sbjct: 407 PQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAGMYFI 466 Query: 202 LT 203 LT Sbjct: 467 LT 468 >gi|182436031|ref|YP_001823750.1| putative arginine/ornithine ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776655|ref|ZP_08235920.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] gi|178464547|dbj|BAG19067.1| putative arginine/ornithine ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326656988|gb|EGE41834.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] Length = 322 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/231 (29%), Positives = 129/231 (55%), Gaps = 14/231 (6%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W + F + + A TL I+ ++ V+ +I+G +AV+R+ + + S + Y+W Sbjct: 64 QWHAVGDKLFDKNVVAGAGRTLLISVLAMVLGVILGVVLAVMRLS-KNPVTSWVAWLYIW 122 Query: 64 IFRGTPLLVQLFVIFY--------GLP-----HIGIVFDSFVAIIISLTLNFSAYISEII 110 FRGTP+ VQL + F +P + V F+ ++ L LN +AY++EI Sbjct: 123 FFRGTPVYVQLLLWFNLALIFPVLNIPFIYKDEMTDVMTPFMCALLGLALNEAAYMAEIC 182 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R+ I S+ +GQ +AS+A+G+T+ +T+R ++LPQ + P +EFI++LK++S+ +T Sbjct: 183 RAGIQSVDEGQTEASHALGMTQGKTMRRVVLPQALRVIIPPTGNEFINMLKTSSLVYAVT 242 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 E+ ++ +I ST+Y + + + Y+++TS + Q +E + + Sbjct: 243 YNELLRSTSQIGSTSYAVMEMLFVASIWYIVMTSVFSVGQYYLERRFARGS 293 >gi|307321129|ref|ZP_07600533.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306893204|gb|EFN23986.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] Length = 323 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 121/210 (57%), Gaps = 1/210 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F I L+ +V TL I+ IS ++ +I A+ ++ + I L FY +F Sbjct: 107 FAFIAKKLSFLISQGVVTTLYISVISIAVATVIALVGAIAKLSKNGVIYGL-ATFYTSLF 165 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG PLL+Q+++I+ GLP +G V + A I++L+L + AY++EI R+ I SIP+GQ + + Sbjct: 166 RGLPLLMQIYIIYLGLPQVGYVISAVPAGILALSLCYGAYMTEIFRAGIESIPRGQTEGA 225 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL+ QT+ +ILPQ + P ++FI++LK +S+ S + + E+ A+ T Sbjct: 226 TALGLSPSQTMGLVILPQAMRVIIPPTGNQFIAMLKDSSLISVVGVWELMYLARTQGQTE 285 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIES 215 ++ + + + +Y IL+ +Q ++E+ Sbjct: 286 FRHIEMLITASMIYWILSIGLEYMQSRVEA 315 >gi|325274872|ref|ZP_08140885.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] gi|324099989|gb|EGB97822.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] Length = 320 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 117/198 (59%), Gaps = 6/198 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ +S + L+IG F + R+ + T+ L YV + RGTPLLVQ+F+ ++ Sbjct: 125 TLWISVVSGALGLVIGLFAGLCRLSTNPTLRDLST-VYVELVRGTPLLVQIFIFYF---F 180 Query: 84 IGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IG V + A + +L L AY++EI+R+ + SI KGQ +A+ ++GL Q++RH+IL Sbjct: 181 IGTVLNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNAGQSMRHVIL 240 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ PL+ +FIS++K TS+ S I I E+ ++ + ++T++ I+ +A +YL+ Sbjct: 241 PQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWFCVAGLYLL 300 Query: 202 LTSFCYIIQIKIESSVTQ 219 + I ++E + Q Sbjct: 301 INLPLSHIASRLERRLAQ 318 >gi|297587192|ref|ZP_06945837.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Finegoldia magna ATCC 53516] gi|297575173|gb|EFH93892.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Finegoldia magna ATCC 53516] Length = 526 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 114/207 (55%), Gaps = 12/207 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-----------IISLI 57 I + + L ++TL IA +S ++ +IG +AVIR D +I+ I Sbjct: 288 IFNEYGSLFLKGALMTLFIASVSTIVGFLIGILVAVIRNMKLDKDKNKFTYYLHKVINFI 347 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV IFRGTP++VQ +I++G ++GI A + +++N AY+SE++R I S Sbjct: 348 LACYVEIFRGTPMMVQSMLIYFGAKLYLGIDMAPISAALFIVSVNTGAYLSEVVRGGINS 407 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + GQ +A A+G+T Q++ ++ILPQ I + +EF+ +K TSV + I++ E+F Sbjct: 408 VDVGQMEACKALGMTHGQSMINVILPQAIKNILPSIGNEFVINIKDTSVLNVISVTELFF 467 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ I +TY Y +Y +LT Sbjct: 468 VSKSIAGSTYNIFETYAVTCVIYFVLT 494 >gi|65317794|ref|ZP_00390753.1| COG0765: ABC-type amino acid transport system, permease component [Bacillus anthracis str. A2012] Length = 233 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/187 (34%), Positives = 112/187 (59%), Gaps = 3/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A IV TL + S V+ +IG A RI ++ +++ I H Y+ I Sbjct: 5 FEIFMSTYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-NNKVLNSIAHVYIAII 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 63 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAA 121 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 122 RSLGMPYPLAMRRIVLPQAFRQSLPPLGNQFIIGLKDSSLVAYVGMAELWGSGLSIAAGN 181 Query: 186 YQPLIIY 192 +Q L Y Sbjct: 182 FQQLDTY 188 >gi|229587792|ref|YP_002869911.1| putative amino acid transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229359658|emb|CAY46506.1| putative amino acid transportsystem, membrane protein [Pseudomonas fluorescens SBW25] Length = 221 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 63/182 (34%), Positives = 106/182 (58%), Gaps = 2/182 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN I+ + P L A+ VTL + I+ SL++ A + +F +S ++ YV + Sbjct: 5 FNFILSTLPAFL-KAVGVTLQVGLIAIATSLLVALINAALLVF-RTPYLSRLVALYVELA 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL+QLF +++ LP +G F A II++T AY++E++R+ + ++P Q ++ Sbjct: 63 RNTPLLIQLFFVYFALPALGFNISGFWAAIITMTFLGGAYLTEVLRAGVEAVPLAQIESG 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IGL+ Q +RH+ILPQ S L + FI +LK T+V S + +PEI T + ++ Sbjct: 123 KSIGLSDWQLLRHVILPQAGILSLPALFANFIFLLKETTVVSAVAVPEILYTTKSYIALY 182 Query: 186 YQ 187 Y+ Sbjct: 183 YK 184 >gi|148543750|ref|YP_001271120.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri DSM 20016] gi|184153156|ref|YP_001841497.1| glutamine ABC transporter permease component [Lactobacillus reuteri JCM 1112] gi|194468312|ref|ZP_03074298.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] gi|227363270|ref|ZP_03847402.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|325682122|ref|ZP_08161640.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] gi|148530784|gb|ABQ82783.1| amino acid ABC transporter membrane protein, PAAT family [Lactobacillus reuteri DSM 20016] gi|183224500|dbj|BAG25017.1| glutamine ABC transporter permease component [Lactobacillus reuteri JCM 1112] gi|194453165|gb|EDX42063.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] gi|227071726|gb|EEI10017.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|324978766|gb|EGC15715.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] Length = 215 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 98/161 (60%), Gaps = 5/161 (3%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I+ YVW+ RGTPLL+QL +FYGLP IGIVF+ + A +++ LN++AY +EI R S Sbjct: 52 ILEIYVWLMRGTPLLLQLIFVFYGLPIIGIVFERYDAALVAFILNYAAYFAEIFRGGFQS 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + +GQ++A+ + L+ QT+R II+PQ I + +E I+++K +S+ I + ++ + Sbjct: 112 VDQGQFEAARVLRLSYWQTLRKIIIPQVIKIVIPSIGNEVINLVKDSSLVYVIGLGDLLR 171 Query: 177 TAQRIVS--TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 S T PL++ + +YLIL C +I ++E Sbjct: 172 AGNVATSRDVTLVPLML---VGLIYLILVGICTLILRQVEK 209 >gi|160903091|ref|YP_001568672.1| polar amino acid ABC transporter, inner membrane subunit [Petrotoga mobilis SJ95] gi|160360735|gb|ABX32349.1| polar amino acid ABC transporter, inner membrane subunit [Petrotoga mobilis SJ95] Length = 213 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/185 (36%), Positives = 109/185 (58%), Gaps = 1/185 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I VTL + IS VI +G +AV + + + + I + ++ I RGTPLLVQLF+++Y Sbjct: 4 GIWVTLFLTLISIVIGFFLGVLLAVSKTY-GNKLFYYISYVFIEIIRGTPLLVQLFILYY 62 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 LP IGI +A I++ +LN +AY +E +R +I SI GQ A+ +IG+ + Q IR I Sbjct: 63 SLPVIGIRLSPILASIMAFSLNSAAYQAEYLRGAIQSISSGQMQAALSIGMKKWQAIRLI 122 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + ++EFI +LK +S++ + PEI A+ + S ++ +Y A +Y Sbjct: 123 ILPQALRRFIPSWTNEFIYLLKYSSLSYIVGAPEIMAQAKFVASRNFEFFQVYLFAAIIY 182 Query: 200 LILTS 204 +L + Sbjct: 183 FVLVT 187 >gi|229159505|ref|ZP_04287521.1| Amino acid ABC transproter, permease [Bacillus cereus R309803] gi|228623962|gb|EEK80772.1| Amino acid ABC transproter, permease [Bacillus cereus R309803] Length = 230 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/188 (36%), Positives = 112/188 (59%), Gaps = 3/188 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + + I ++P LL A VVTL + S V+ +IG A RI ++ I++ I H Y+ I Sbjct: 2 YEIFISTYPTLL-KATVVTLQLTLTSLVLGSLIGLLFAFFRIS-NNKILNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + IVF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSV-IVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGN 178 Query: 186 YQPLIIYC 193 +Q L Y Sbjct: 179 FQQLDTYV 186 >gi|228475903|ref|ZP_04060613.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus hominis SK119] gi|228270058|gb|EEK11528.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus hominis SK119] Length = 484 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/195 (34%), Positives = 112/195 (57%), Gaps = 4/195 (2%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-FFSDTIISLIMHFYVWIFRGTP 69 D + + T+ I+ I V+ ++G IA+ ++ F ++S I Y+ RGTP Sbjct: 274 DKYGAFFIKGLKNTILISMIGVVLGAVLGALIALAKLSKFK--LLSWIASIYIEFLRGTP 331 Query: 70 LLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +LVQ+F++F+G + G+ + V I+L +N SAYI+EI R+ I ++ KGQ +A+ + Sbjct: 332 MLVQVFLVFFGTTAVLGLDVSALVCGTIALVINSSAYIAEIFRAGINAVDKGQTEAAQCL 391 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL +T+R+IILPQ I L +EF++++K +S+ STI + EI AQ + ++ P Sbjct: 392 GLNYSKTMRYIILPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDP 451 Query: 189 LIIYCELAFVYLILT 203 A +Y ILT Sbjct: 452 FTPLIIAAIMYFILT 466 >gi|241762840|ref|ZP_04760903.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] gi|241368015|gb|EER62220.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] Length = 217 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 112/184 (60%), Gaps = 5/184 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + I+ V+++ +G +A+ R+ + S ++ Y+W+ RGTPL++Q+ I++ LP Sbjct: 17 VTLKLFAITLVLAVPLGLVLALARLSHFKPL-SAAVNGYIWLMRGTPLMLQMLFIYFALP 75 Query: 83 H---IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 IG+ F A +++ LN++AY +EI R+ I S+ +GQ++A+ +G+ QT+R I Sbjct: 76 FVPVIGVRLPDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEAAKVLGMNYGQTMRRI 135 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + + P+S+E I+++K TS+ + + ++ + A+ IV + AF Y Sbjct: 136 VLPQMVRSILPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDFTTTPFIVAAAF-Y 194 Query: 200 LILT 203 LI+T Sbjct: 195 LIMT 198 >gi|291612200|ref|YP_003541013.1| putative amino acid ABC transporter permease [Bacillus anthracis str. 'Ames Ancestor'] gi|224552833|gb|ACN55047.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. 'Ames Ancestor'] Length = 269 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/187 (34%), Positives = 112/187 (59%), Gaps = 3/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A IV TL + S V+ +IG A RI ++ +++ I H Y+ I Sbjct: 41 FEIFMSTYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-NNKVLNSIAHVYIAII 98 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 99 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAA 157 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 158 RSLGMPYPLAMRRIVLPQAFRQSLPPLGNQFIIGLKDSSLVAYVGMAELWGSGLSIAAGN 217 Query: 186 YQPLIIY 192 +Q L Y Sbjct: 218 FQQLDTY 224 >gi|314936089|ref|ZP_07843436.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus hominis subsp. hominis C80] gi|313654708|gb|EFS18453.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus hominis subsp. hominis C80] Length = 484 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/195 (34%), Positives = 112/195 (57%), Gaps = 4/195 (2%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-FFSDTIISLIMHFYVWIFRGTP 69 D + + T+ I+ I V+ ++G IA+ ++ F ++S I Y+ RGTP Sbjct: 274 DKYGAFFIKGLKNTILISMIGVVLGAVLGALIALAKLSKFK--LLSWIASIYIEFLRGTP 331 Query: 70 LLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +LVQ+F++F+G + G+ + V I+L +N SAYI+EI R+ I ++ KGQ +A+ + Sbjct: 332 MLVQVFLVFFGTTAVLGLDVSALVCGTIALVINSSAYIAEIFRAGINAVDKGQTEAAQCL 391 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL +T+R+IILPQ I L +EF++++K +S+ STI + EI AQ + ++ P Sbjct: 392 GLNYSKTMRYIILPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDP 451 Query: 189 LIIYCELAFVYLILT 203 A +Y ILT Sbjct: 452 FTPLIIAAIMYFILT 466 >gi|326793483|ref|YP_004311303.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas mediterranea MMB-1] gi|326544247|gb|ADZ89467.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas mediterranea MMB-1] Length = 216 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 122/203 (60%), Gaps = 6/203 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ ++F+ ++ + +R+ ++I+ ++ Y+ +F+GTPLL+Q+F+ F+G+ Sbjct: 20 TVLLSLVAFIGGTLVALVLTALRLT-RNSILQKLVAVYIELFQGTPLLMQMFLCFFGVSL 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G ++ A I++LTL SA++ EI R I ++PKGQW+AS +G++ Q +R+IILPQ Sbjct: 79 LGYEISAWSAAILALTLFTSAFLVEIWRGCIDTLPKGQWEASRCLGMSFLQILRYIILPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T++AS I E+ + + + T++P ++ +A +Y +L Sbjct: 139 ALRVAIAPTVGFSVQVVKGTALASVIGFVELTKAGTMLNNATFEPFKVFAMVAVIYFLL- 197 Query: 204 SFCYIIQIKIESSVTQHTYSVDK 226 CY + + S + + ++V + Sbjct: 198 --CY--PLSLSSKILEKKFNVSR 216 >gi|322411919|gb|EFY02827.1| cystine transport system permease protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 216 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 95/149 (63%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEII 110 +I ++ Y+ I RG P++V LFV+++GLP+ G+ + + + ++ +AYISE+ Sbjct: 47 QRLIHYLVRAYISIMRGVPMIVVLFVLYFGLPYYGLELPALLCAYLGFSMVSAAYISEVF 106 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 RSSI +I KGQW+A+ A+GL ++ IILPQ + PL + I ++KS+S+A+ IT Sbjct: 107 RSSIEAIDKGQWEAAKALGLPYSLMVKKIILPQAFRIAVPPLGNVIIDMVKSSSLAAMIT 166 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +P+IFQ ++ I + + +Y +AF+Y Sbjct: 167 VPDIFQNSKIIGGREWDYMSMYILVAFIY 195 >gi|303325414|ref|ZP_07355857.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio sp. 3_1_syn3] gi|302863330|gb|EFL86261.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio sp. 3_1_syn3] Length = 267 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/184 (35%), Positives = 108/184 (58%), Gaps = 2/184 (1%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +VVT I +S ++ +G + RI + I+L+ YV + RG PLLVQLF I+Y Sbjct: 66 GVVVTFKITVMSICCAVPLGLLTGLGRIS-RNRAINLLASTYVEVIRGIPLLVQLFYIYY 124 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 L + +I++++ + AY+ E+ R+ I++I KGQ +A+ ++G R QT+ ++ Sbjct: 125 ALSRF-FQISGITSAVIAISVCYGAYMGEVFRAGIMAISKGQSEAARSLGFNRFQTMFYV 183 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ T P+ +E I++LK TS+ S + +P+I Q A+ V TTY Y +A +Y Sbjct: 184 VLPQAWRTILPPVGNECIAMLKDTSLVSIMAVPDIMQRARSFVGTTYLYFETYTVIALIY 243 Query: 200 LILT 203 LI+T Sbjct: 244 LIIT 247 >gi|94991751|ref|YP_599850.1| amino acid ABC transporter permease [Streptococcus pyogenes MGAS2096] gi|94545259|gb|ABF35306.1| Amino acid ABC transporter permease protein [Streptococcus pyogenes MGAS2096] Length = 387 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 10/211 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISLIMHFYVWIFRGTPLLVQ 73 +TL I+ + + L IG I + R + ++ Y+ IFRGTP++VQ Sbjct: 163 MTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEIFRGTPMIVQ 222 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 VI+YG GI D +A I +++N AY+SEI+R I ++ KGQ++A+ A+G T Sbjct: 223 SMVIYYGTAQAFGISIDRTLAAIFIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTH 282 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+R I+LPQ + +EF+ +K TSV + I++ E++ + + + TYQ + Sbjct: 283 GQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTF 342 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 +A +Y +LT I IE TY+ Sbjct: 343 TIIAIIYFVLTFTVTRILRHIERRFDADTYT 373 >gi|165871415|ref|ZP_02216063.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|167634127|ref|ZP_02392449.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|167640079|ref|ZP_02398346.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|170688352|ref|ZP_02879561.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|170708925|ref|ZP_02899358.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|177653629|ref|ZP_02935768.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|190567465|ref|ZP_03020378.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|227813034|ref|YP_002813043.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|229603364|ref|YP_002864981.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] gi|254686755|ref|ZP_05150613.1| amino acid ABC transproter, permease [Bacillus anthracis str. CNEVA-9066] gi|254724831|ref|ZP_05186614.1| amino acid ABC transproter, permease [Bacillus anthracis str. A1055] gi|254739022|ref|ZP_05196724.1| amino acid ABC transproter, permease [Bacillus anthracis str. Western North America USA6153] gi|254740746|ref|ZP_05198436.1| amino acid ABC transproter, permease [Bacillus anthracis str. Kruger B] gi|254756134|ref|ZP_05208163.1| amino acid ABC transproter, permease [Bacillus anthracis str. Vollum] gi|254761952|ref|ZP_05213801.1| amino acid ABC transproter, permease [Bacillus anthracis str. Australia 94] gi|164712899|gb|EDR18428.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|167511890|gb|EDR87269.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|167530441|gb|EDR93156.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|170126158|gb|EDS95052.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|170667684|gb|EDT18438.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|172081209|gb|EDT66284.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|190561252|gb|EDV15224.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|227002430|gb|ACP12173.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|229267772|gb|ACQ49409.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] Length = 230 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/187 (34%), Positives = 112/187 (59%), Gaps = 3/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A IV TL + S V+ +IG A RI ++ +++ I H Y+ I Sbjct: 2 FEIFMSTYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-NNKVLNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYPLAMRRIVLPQAFRQSLPPLGNQFIIGLKDSSLVAYVGMAELWGSGLSIAAGN 178 Query: 186 YQPLIIY 192 +Q L Y Sbjct: 179 FQQLDTY 185 >gi|210623571|ref|ZP_03293897.1| hypothetical protein CLOHIR_01847 [Clostridium hiranonis DSM 13275] gi|210153441|gb|EEA84447.1| hypothetical protein CLOHIR_01847 [Clostridium hiranonis DSM 13275] Length = 219 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/202 (36%), Positives = 121/202 (59%), Gaps = 6/202 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-L 81 VTL ++ ++ + LI+ F IA++ I I++ + Y+ FRGTPL+ QLF ++G L Sbjct: 14 VTLKLSVLAIIFGLILAFIIAIV-IDAKVPILNKVFKVYISFFRGTPLMSQLFCFYFGVL 72 Query: 82 PHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 P + + SF A +I L+L SAY++E +R++I SI KGQ +AS +IG+T Q++ Sbjct: 73 PLLNHDTMLRISSFYAALIILSLASSAYMAESLRAAITSIHKGQMEASQSIGMTYMQSMY 132 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 HIILPQ I + L S FI+I+K TS+ I + E+ AQ S++Y+ L + + Sbjct: 133 HIILPQAIRVAIPTLFSSFINIVKDTSLVFAIGVKEMMAQAQLEGSSSYKYLEAFVCVLL 192 Query: 198 VYLILTSFCYIIQIKIESSVTQ 219 +Y ++TS +Q ++E + + Sbjct: 193 IYWMITSIMTFVQSRLEKKMGK 214 >gi|302379711|ref|ZP_07268196.1| ABC transporter, permease protein [Finegoldia magna ACS-171-V-Col3] gi|302312618|gb|EFK94614.1| ABC transporter, permease protein [Finegoldia magna ACS-171-V-Col3] Length = 526 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 12/226 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-----------IISLI 57 I + + L ++TL IA +S +I +IG +AVIR D I+ I Sbjct: 288 IFNEYGSLFLKGALMTLFIASVSTIIGFLIGILVAVIRNMKLDKDKNKFTYYLHKFINFI 347 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV IFRGTP++VQ +I++G ++GI A + +++N AY+SE++R I S Sbjct: 348 LACYVEIFRGTPMMVQSMLIYFGAKLYLGIDMAPISAALFIVSVNTGAYLSEVVRGGINS 407 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + GQ +A A+G+T Q++ ++ILPQ I + +EF+ +K TSV + I++ E+F Sbjct: 408 VDVGQMEACKALGMTHSQSMINVILPQAIKNILPSIGNEFVINIKDTSVLNVISVTELFF 467 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 ++ I +TY Y +Y +LT I + IE Y Sbjct: 468 VSKSIAGSTYNIFETYAVTCVIYFVLTFSLTRILLYIEKKSNNREY 513 >gi|268678765|ref|YP_003303196.1| polar amino acid ABC transporter inner membrane subunit [Sulfurospirillum deleyianum DSM 6946] gi|268616796|gb|ACZ11161.1| polar amino acid ABC transporter, inner membrane subunit [Sulfurospirillum deleyianum DSM 6946] Length = 321 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 123/208 (59%), Gaps = 14/208 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLIMHFYVWIFRGTPLLV 72 L ++VTL I+ ++ +++ +G +A +RI F D I Y+ I RGTPLLV Sbjct: 117 LVEGLLVTLEISGLAAILAFSMGALLAFMRISHYQFLKD-----IATIYIAIIRGTPLLV 171 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 Q+F+ ++ + I + F A ISL L F AYI+E++R +I SI KGQ++A+ ++G+ Sbjct: 172 QIFIFYFIIATI-FEIERFFAGAISLGLFFGAYIAEVLRGAIQSIDKGQYEAAKSLGMNY 230 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+ +II+PQ + + L E I+++K +S+ S I+I ++ + + IV+ T+ P + Sbjct: 231 PQTMLYIIMPQALKRALPTLVGEMIALVKDSSLVSVISITDLTKVGREIVANTFSPFETW 290 Query: 193 CELAFVY----LILTSFCYIIQIKIESS 216 +A VY +LT+F + I+ K++ Sbjct: 291 LIIAAVYFMITFLLTAFGHKIETKMKKQ 318 >gi|289450823|ref|YP_003475334.1| putative arginine ABC transporter permease ArtQ [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185370|gb|ADC91795.1| putative arginine ABC transporter, permease protein ArtQ [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 229 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 113/190 (59%), Gaps = 6/190 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + TL ++ + I+G FIA +R S +S+ Y+ IFRGTPLLVQ+ + +Y Sbjct: 21 GTLTTLQLSFFGVLFGFILGLFIAFMRGSRSP-FLSVPAKIYIQIFRGTPLLVQVLIAYY 79 Query: 80 GLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 G + + + V +I++ +N SAY+SE+IRS I S+ +GQ++A+ ++G+ +KQ Sbjct: 80 GFASVIPNEYNYLKNPLVLSLIAICMNSSAYVSEVIRSGINSVDRGQFEAASSLGMKKKQ 139 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + +IILPQ I T L +EFI+++K +++ + + I ++ A+ +T +P + Y Sbjct: 140 IMYYIILPQAIKTVLPALGNEFITLIKESAIVAFVGIGDLMYQAKIAQGSTLKPFMPYVT 199 Query: 195 LAFVYLILTS 204 A +YL+L + Sbjct: 200 AALIYLVLVT 209 >gi|197295418|ref|YP_002153959.1| putative binding-protein-dependent transport system protein [Burkholderia cenocepacia J2315] gi|195944897|emb|CAR57506.1| putative binding-protein-dependent transport system component [Burkholderia cenocepacia J2315] Length = 216 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 62/184 (33%), Positives = 111/184 (60%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ +SFV ++G + V+R+ S T++ + Y+ +F+GTPLL+QLF++F+GLP Sbjct: 20 TIVLSIVSFVTGGLVGLGLLVMRVSGS-TVLRGVAKLYIEVFQGTPLLMQLFIVFFGLPL 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ +VA LT SAY++EI R + ++PKGQW+AS ++ ++ + +RH+ILPQ Sbjct: 79 VGLDVPPWVAATAGLTFFTSAYLAEIWRGCVEAVPKGQWEASASLAMSYVEQLRHVILPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + P + +K T++ S I E+ + I + T++P ++Y +A +Y L Sbjct: 139 AARIAIAPTVGFGVQAVKDTALVSIIGFTELTKVGIAISNATFRPFVVYGLVALIYFAL- 197 Query: 204 SFCY 207 CY Sbjct: 198 --CY 199 >gi|196040103|ref|ZP_03107405.1| putative amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] gi|300118987|ref|ZP_07056698.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus SJ1] gi|196028958|gb|EDX67563.1| putative amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] gi|298723603|gb|EFI64334.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus SJ1] Length = 230 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/187 (34%), Positives = 112/187 (59%), Gaps = 3/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A IV TL + S V+ +IG A RI ++ +++ I H Y+ I Sbjct: 2 FEIFMSTYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-NNKVLNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYSLAMRRIVLPQAFRQSIPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGN 178 Query: 186 YQPLIIY 192 +Q L Y Sbjct: 179 FQQLDTY 185 >gi|91781168|ref|YP_556375.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693828|gb|ABE37025.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] Length = 319 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 118/214 (55%), Gaps = 19/214 (8%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + +TL + C + I +++G +AV+R S+ +S+ Y+W FRGTP+LVQL F Sbjct: 83 SGLGLTLWLTCAAMAIGIVLGTLLAVMRTS-SNPFLSVPAQLYLWFFRGTPVLVQLIFWF 141 Query: 79 Y----------GLPHIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +P ++F + A ++ L LN AY++EI+R+ I+SI G Sbjct: 142 NLAILIPQISIAIPFGPVLFHGSANDLITPYTAALLGLGLNEGAYMAEIVRAGILSIDPG 201 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+G+T + +R I+LPQ I P +E I +LK+TS+ S I + ++ + + Sbjct: 202 QQEAARALGMTPARILRRIVLPQAIRIIVPPAGNETIGMLKTTSLVSVIALSDLLYSVES 261 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + S T+Q + + YL++TS ++Q +IE Sbjct: 262 VSSRTFQTIPLLVVACIWYLVVTSVLSLLQSRIE 295 >gi|291166921|gb|EFE28967.1| amino acid ABC transporter, permease protein [Filifactor alocis ATCC 35896] Length = 214 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 118/200 (59%), Gaps = 11/200 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII---SLIMHFYVWIF 65 ++ S L Y ++ TL + + + S+ +G IA +R D+ I I+ Y+++ Sbjct: 1 MLTSLITLSYQGLLTTLSVFFSTLLCSIPLGLLIAPLR----DSKIPWVKTIVKQYIYVM 56 Query: 66 RGTPLLVQLFVIFYGLPHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 R TPLL+Q +F+GLP + +V F AI ++ TLN++AY +EI R I SIPKGQ+ Sbjct: 57 RSTPLLLQTMFLFFGLPLVPVVSITLPRFTAIWLAFTLNYAAYFAEIFRGGIQSIPKGQY 116 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A+ +GL++K T R+II+PQ I + +++E I++LK TS+ + + +I + A+ V Sbjct: 117 QAAKVLGLSKKNTFRYIIVPQVIKITLPSVANEVINLLKDTSLVYILGMSDILKVAKS-V 175 Query: 183 STTYQPLIIYCELAFVYLIL 202 S TY + Y +A +Y IL Sbjct: 176 SNTYASFVPYLFVACLYFIL 195 >gi|318060272|ref|ZP_07978995.1| arginine/ornithine transport permease [Streptomyces sp. SA3_actG] Length = 347 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 125/219 (57%), Gaps = 22/219 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + + T+ + ++ VI + G +AV+R+ + + S I FY+W FRGTP+LV Sbjct: 100 FDDRILSGLGKTMLLTVVAMVIGIAGGVVLAVMRLS-KNPVTSSIAWFYIWFFRGTPVLV 158 Query: 73 QLFVIFYGLPHIGIVFD-------------SFV----AIIISLTLNFSAYISEIIRSSII 115 QL V F ++G+VF+ SF+ ++ L LN +AY++EI R+ ++ Sbjct: 159 QLMVWF----NLGLVFEYINLGPLYKDYWSSFMTPLLTALLGLGLNEAAYMAEICRAGLL 214 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ +GQ +A++A+G++ +T+R I++PQ + P +E I++LK+TS+ + + PE+ Sbjct: 215 AVDEGQTEAAHALGMSHAKTLRRIVIPQAMRVIVPPTGNEVINMLKTTSLVAAVQYPELL 274 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + AQ I + P+ + A YLILTS I Q IE Sbjct: 275 RAAQDIGQVSGAPVEMLFLAAAWYLILTSVLSIGQFYIE 313 >gi|307296170|ref|ZP_07576000.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|306496144|gb|EFM65724.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] Length = 214 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/159 (35%), Positives = 98/159 (61%), Gaps = 1/159 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +++ Y+W+ RGTPLL+QL +FYGLP IGIVF+ + A + + LN++AY +EI I + Sbjct: 51 LINLYIWLMRGTPLLLQLIFVFYGLPLIGIVFERYDAALFAFILNYAAYFAEIFHGGIQA 110 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQ++A+ + LTR QT+ IILPQ + + +E I+++K TS+ + + ++ + Sbjct: 111 IPQGQYEAAKVLRLTRFQTVTRIILPQVVKIVLPSVGNEIINLVKDTSLIYVLGLGDLLR 170 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 A +I + L+ + +YL+ T+ + KIE Sbjct: 171 -AGKIAMSRDVTLVPLALVGVIYLLFTAILTVASKKIEK 208 >gi|42518507|ref|NP_964437.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] gi|41582792|gb|AAS08403.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] gi|329666777|gb|AEB92725.1| ABC transporter permease component [Lactobacillus johnsonii DPC 6026] Length = 214 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 3/199 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 N I P L A + T+ I + V+S+ +G +A + ++ I+ FYVWI Sbjct: 2 LNYIFSILPSLFSGAWL-TIEIFFWTTVVSIPLGLLVA-FGLHSKLKLVKAILKFYVWII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLL+QL IFYGLP +GIVF + A +++ +N++AY +EI R + ++P GQ++A+ Sbjct: 60 RGTPLLLQLIFIFYGLPTVGIVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPVGQFEAA 119 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GL+R QTI I+ PQ + + +E I+++K +S+ I + ++ + A + + Sbjct: 120 QVLGLSRWQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYVIGLGDLLR-AGNVATAR 178 Query: 186 YQPLIIYCELAFVYLILTS 204 L+ + VYL +T+ Sbjct: 179 DVSLVPLVLVGCVYLAMTA 197 >gi|330816870|ref|YP_004360575.1| Polar amino acid ABC transporter, inner membrane subunit [Burkholderia gladioli BSR3] gi|327369263|gb|AEA60619.1| Polar amino acid ABC transporter, inner membrane subunit [Burkholderia gladioli BSR3] Length = 248 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 69/224 (30%), Positives = 127/224 (56%), Gaps = 11/224 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++D+ QL+ AA+ TL + +S VI ++ I +R+ + + Y+ +F Sbjct: 5 FPFLLDTMRQLI-AAVPTTLGLFFLSLVIGGLLSLVIVAMRVS-RHWLPNRFARAYILVF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIIS 116 RG+PLL+Q+F+++YGL G++ +SF V ++SL L + Y +EIIR +++ Sbjct: 63 RGSPLLIQMFLVYYGLGEFGVIRESFLWPVLREPYVCAVLSLALCTAGYTAEIIRGGLMA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P GQ +A YAIGL+ +R +I P + S+E + ++KST++AS +T+ E+ Sbjct: 123 VPVGQIEAGYAIGLSGFSLLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 AQ+I+ TY+ ++ A +YL L + +E+ +++H Sbjct: 183 VAQQIIQQTYRTTEVFVCAALIYLFLNFVVVRLLGFLETRLSRH 226 >gi|56420514|ref|YP_147832.1| glutamine ABC transporter permease [Geobacillus kaustophilus HTA426] gi|56380356|dbj|BAD76264.1| glutamine ABC transporter (permease) [Geobacillus kaustophilus HTA426] Length = 216 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/201 (36%), Positives = 117/201 (58%), Gaps = 2/201 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L +VTL +A IS V+S + G I VIR + ++S ++ V R PLL+ + Sbjct: 13 KFLLQGFLVTLEVAFISIVLSFVFGIIIGVIR-YTKIPVLSQLLAVLVETIRNLPLLLII 71 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F ++ LP +G+ D A I +L + SA +SEI+RS + SI KGQ +A+ + GLT Q Sbjct: 72 FFTYFALPEVGLKLDKMYAAISALVIFESAMLSEIVRSGLQSIDKGQIEAARSSGLTYMQ 131 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI-IYC 193 T+ +IILPQ + P+ S+FIS+LK TS+A I++PE+ AQ I +I I+ Sbjct: 132 TLWYIILPQALRRMVPPIVSQFISLLKDTSLAIVISLPELMNHAQIINGRNVNFVIPIFI 191 Query: 194 ELAFVYLILTSFCYIIQIKIE 214 +AF+Y I+ ++ ++E Sbjct: 192 LVAFMYFIVNYSLSLLSRRLE 212 >gi|303234492|ref|ZP_07321129.1| ABC transporter, permease protein [Finegoldia magna BVS033A4] gi|302494326|gb|EFL54095.1| ABC transporter, permease protein [Finegoldia magna BVS033A4] Length = 526 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 12/226 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-----------IISLI 57 I + + L ++TL IA +S +I +IG +AVIR D I+ I Sbjct: 288 IFNEYGSLFLKGALMTLFIASVSTIIGFLIGILVAVIRNMKLDKDKNKFTYYLHKFINFI 347 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV IFRGTP++VQ +I++G ++GI A + +++N AY+SE++R I S Sbjct: 348 LACYVEIFRGTPMMVQSMLIYFGAKLYLGIDMAPISAALFIVSVNTGAYLSEVVRGGINS 407 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + GQ +A A+G+T Q++ ++ILPQ I + +EF+ +K TSV + I++ E+F Sbjct: 408 VDVGQMEACKALGMTHSQSMINVILPQAIKNILPSIGNEFVINIKDTSVLNVISVTELFF 467 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 ++ I +TY Y +Y +LT I + IE Y Sbjct: 468 VSKSIAGSTYNIFETYAVTCVIYFVLTFSLTRILLYIEKKSNNKEY 513 >gi|118590273|ref|ZP_01547676.1| amino acid ABC transporter, permease protein [Stappia aggregata IAM 12614] gi|118437245|gb|EAV43883.1| amino acid ABC transporter, permease protein [Stappia aggregata IAM 12614] Length = 275 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 123/222 (55%), Gaps = 13/222 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ +P+ L + VTL I +S +I I+ IA R ++S + YV+ FRGT Sbjct: 54 VLKYWPEYL-SGFFVTLQIVGLSLLIGAILSLPIAAARAS-KWWLLSKPAYCYVYFFRGT 111 Query: 69 PLLVQLFVIFYGL----PHI------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLL Q F+++YG P + G+ +++ +I + +LN SAY +EI+R +I ++ Sbjct: 112 PLLAQTFLVYYGAGTFQPQLEAIGLWGLFREAWFCVIFAFSLNTSAYQAEILRGAIQNVS 171 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW+ + A+G+ +K T IILPQ + + P +E I +LK +++A+ +T+ ++F Sbjct: 172 RGQWEGAAALGINKKITFFKIILPQALIVALRPYGNEIILMLKGSAIAAIVTVFDLFGET 231 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +R S +Y Y A +YL L + +IE +T+H Sbjct: 232 RRAYSRSYD-FQAYIWAAVIYLFLVEMLRRLWDRIEIRLTRH 272 >gi|303253105|ref|ZP_07339254.1| putative ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248741|ref|ZP_07530754.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302647787|gb|EFL77994.1| putative ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854668|gb|EFM86858.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 219 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/179 (33%), Positives = 106/179 (59%), Gaps = 2/179 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++++ P + AAI+ TL ++ ++SL+ G IA++ + L Y+ + R T Sbjct: 6 VVNAIPLFIDAAII-TLQLSFWGILLSLVFGLLIAIVTAYQVKPFYGL-ARGYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF ++YGLP IGI +D F II+L ++Y++E +R+ ++++PKGQ +A+ AI Sbjct: 64 PLLIQLFFLYYGLPKIGIKWDGFTCGIIALVFLGASYMAEALRAGLLAVPKGQAEAAKAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GL R Q R++I PQ S + + + ++K TSV S + + E+ + I+ Y+ Sbjct: 124 GLNRFQVFRYVIFPQAWAVSIPAIGANVLFLIKETSVISAVAVAELMFVTKDIIGMDYK 182 >gi|241206675|ref|YP_002977771.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860565|gb|ACS58232.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 215 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/184 (36%), Positives = 109/184 (59%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ +F I+G I RI + S Y+ +F+GTPLL+QLF++F+GLP Sbjct: 20 TLMLSLAAFAGGAIVGLAILSARISKTRWPRSFASG-YIALFQGTPLLMQLFLMFFGLPM 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G +S+ A + LT SAY++EI RS + ++P+GQWDA+ ++GL R +R IILPQ Sbjct: 79 LGFRIESWTAAVCGLTFYASAYLAEIWRSGVEAVPRGQWDAAASLGLHRLLELRLIILPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + P + ++KST++AS + E+ +TA I + T++P +Y +A ++ L Sbjct: 139 AFRITRAPTVGFLVQLIKSTALASILGFDELLKTANAINNATFEPFKVYGLVAVIFFAL- 197 Query: 204 SFCY 207 CY Sbjct: 198 --CY 199 >gi|157803317|ref|YP_001491866.1| succinate dehydrogenase flavoprotein subunit [Rickettsia canadensis str. McKiel] gi|157784580|gb|ABV73081.1| succinate dehydrogenase flavoprotein subunit [Rickettsia canadensis str. McKiel] Length = 218 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 122/207 (58%), Gaps = 7/207 (3%) Query: 5 WFNLIIDSFPQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 F +I +P++L+ +VTL + I+ + L+IG +A+ ++ + + +FY Sbjct: 1 MFEYLIKFYPKILFIVEGTLVTLKYSVIAVIFGLVIGMLLAICKVN-KNYALRFFANFYT 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 IFRGTPLL+QL +I++ P+I GI F F A IS +LN AY+SE+IR+ I ++ KGQ Sbjct: 60 SIFRGTPLLIQLSIIYFASPYIVGIKFSVFTAGAISFSLNSGAYVSEVIRAGINAVDKGQ 119 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++A+ A+ + R ++ IILPQ + L +E +S++K +++ S + ++ + AQ + Sbjct: 120 FEAAEALAIPRYLIMQDIILPQAVKNIFPSLVNELVSLIKESAIISMLGEIDLMRRAQIV 179 Query: 182 VSTTYQ---PLIIYCELAFVYLILTSF 205 TY P++I ++ ++L SF Sbjct: 180 SIETYNYFFPMLIAACCYYILVMLISF 206 >gi|153011394|ref|YP_001372608.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151563282|gb|ABS16779.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 218 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/201 (35%), Positives = 110/201 (54%), Gaps = 2/201 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y+W + + L + T+ I+ + + +G A+ R+ + II++ + Sbjct: 1 MDYQWDFSGLWQYRGLFLQGLAYTVGFTIITVLSGIFVGTVFALGRLS-GNKIITVPIMT 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 V IFR TP+LVQL +Y LP IG +A I+LT +A+ +EIIR I+SI Sbjct: 60 VVEIFRCTPVLVQLVWCYYALPMLIGFEISPAMAAFITLTFYGAAFYAEIIRGGIVSIDA 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQWDA AIG+ R Q + IILPQ + PL ++ + LK+TS+ S + +P++ Q Sbjct: 120 GQWDAGRAIGMRRGQLMGKIILPQALRRMVPPLVNQSVLQLKNTSLLSVLAVPDLLYQGQ 179 Query: 180 RIVSTTYQPLIIYCELAFVYL 200 + S TY+PL Y +A +YL Sbjct: 180 LVTSATYRPLETYTLIAVLYL 200 >gi|13472038|ref|NP_103605.1| permease protein of amino acid ABC transporter [Mesorhizobium loti MAFF303099] gi|14022783|dbj|BAB49391.1| permease protein of amino acid ABC transporter [Mesorhizobium loti MAFF303099] Length = 224 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 121/207 (58%), Gaps = 5/207 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++ F + S+P L + +T+ ++ IS V+ ++GF + ++R + ++S I+ Sbjct: 1 MIWQQFLSLAGSYP-LALRGLGMTVVLSLISLVLGTVLGFGLGILRTG-GNRLLSGIIGA 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +V + RGTP LVQ+F+IF+ LP GI D+F A II+LT + +I EI+ + I S+P G Sbjct: 59 WVDLIRGTPFLVQIFLIFFILPEFGIELDAFTAGIIALTNLAACFICEIVAAGIRSVPTG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A GL+R Q +R ++LPQ + PL +++ ++K +SV S I + ++ + Sbjct: 119 QVEAALASGLSRWQRMRQVVLPQAMRIVMPPLVGQYVLLIKDSSVVSAIGLTDLTRVGWL 178 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCY 207 +V L+++ + Y I+ CY Sbjct: 179 VVQRVPNGLLVFFLVGVGYFIV---CY 202 >gi|332687120|ref|YP_004456894.1| glutamine ABC transporter membrane-spanning permease [Melissococcus plutonius ATCC 35311] gi|332371129|dbj|BAK22085.1| ABC transporter membrane-spanning permease -glutamine transport [Melissococcus plutonius ATCC 35311] Length = 214 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 96/159 (60%), Gaps = 5/159 (3%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y W+ RGTPLL+QL +FYGLP IG+VF + A++ + LN+SAY +EI R I SIP Sbjct: 53 ELYTWLLRGTPLLLQLIFVFYGLPLIGVVFQRYDAVLFAFILNYSAYFAEIFRGGIQSIP 112 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 K Q +A+ + LT+ QTI H+I PQ + +E I+++K TS+ + + ++ + Sbjct: 113 KEQVEAAKMLKLTKIQTIIHLIFPQVTKIVLPSVGNEVINLIKDTSLIYILGLGDLLRNG 172 Query: 179 QRIVS--TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q +S T PLI+ + F+YL++T+ I ++E Sbjct: 173 QVAMSRDVTLIPLIL---VGFIYLLMTAILTAIIKRLEK 208 >gi|119719814|ref|YP_920309.1| polar amino acid ABC transporter, inner membrane subunit [Thermofilum pendens Hrk 5] gi|119524934|gb|ABL78306.1| polar amino acid ABC transporter, inner membrane subunit [Thermofilum pendens Hrk 5] Length = 218 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 116/190 (61%), Gaps = 7/190 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +VVTL I+ ISF++ L + + + S T + + Y+ RGTPLLVQL +I++ Sbjct: 17 GVVVTLQISVISFLLGLAL----GIALLGLSLTSLRPLARMYIEPVRGTPLLVQLLLIYF 72 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP IGI D+F + ++L LN +AY +EI RS++ SIP Q ++ ++G + Q R++ Sbjct: 73 GLPSIGIKLDAFTSSFLALGLNSAAYQAEIFRSALKSIPDVQILSAESLGFSGSQVYRYV 132 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + S L +EF++++K +S+AS I I E+ + + + + TY+ L Y +A +Y Sbjct: 133 ILPQALRISIPSLVNEFVTVVKESSLASVIGIVELTRRGEYVAAYTYRALESYLVVAAIY 192 Query: 200 LILTSFCYII 209 + CY+I Sbjct: 193 F---AVCYLI 199 >gi|251781764|ref|YP_002996066.1| ABC transporter amino acid-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390393|dbj|BAH80852.1| ABC transporter amino acid-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 528 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 10/211 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRI---------FFSDTIISLIMHFYVWIFRGTPLLVQ 73 +TL I+ + + L IG I + R + ++ Y+ IFRGTP++VQ Sbjct: 304 MTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAVLGQKLFGWLLTIYIEIFRGTPMIVQ 363 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 VI+YG GI D +A I +++N AY+SEI+R I ++ KGQ++A+ A+G T Sbjct: 364 SMVIYYGTAQAFGISIDRTLAAIFIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTH 423 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+R I+LPQ + +EF+ +K TSV + I++ E++ + + + TYQ + Sbjct: 424 GQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTF 483 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 +A +Y +LT I IE TY+ Sbjct: 484 TIIAIIYFVLTFTVTRILRHIERRFDADTYT 514 >gi|241895266|ref|ZP_04782562.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] gi|241871572|gb|EER75323.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] Length = 494 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 62/180 (34%), Positives = 109/180 (60%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 ++ +A I +++G A++++ S + I Y+ RG PLL+Q+F++++G Sbjct: 294 SVGLAVIGVFFGIVLGVLFALMKMS-SIKPLKWIAVAYIEAVRGVPLLIQVFIVYFGTQV 352 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 IGI SF+A I++ LN +AY++EIIRS I ++P GQ +A+ ++G T+ QT+R++ILPQ Sbjct: 353 IGIHVSSFLAGAIAMFLNSAAYVAEIIRSGIQAVPDGQTEAARSLGFTKNQTMRYMILPQ 412 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I L +EF++++K SV S I + E+ A + +++P + A +Y ILT Sbjct: 413 AIKNILPALGNEFVTVIKEGSVVSVIGVGELTFQASVVQGASFKPFLPLVITAAIYFILT 472 >gi|89094511|ref|ZP_01167450.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Oceanospirillum sp. MED92] gi|89081247|gb|EAR60480.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Oceanospirillum sp. MED92] Length = 244 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 121/201 (60%), Gaps = 12/201 (5%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +EW ++II+ FP+LL AI+ TL + S L++ +A++R+ S I + Sbjct: 1 MSWEW-DVIIEHFPRLLQGAIL-TLELVLFSGFAGLMLAVPLALMRVS-SKPWIQALPFA 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIR 111 Y++ FRGTPLL+Q+F+++YG + +S + II+ L+ +AYI+E++R Sbjct: 58 YIFFFRGTPLLIQIFLVYYGSSQFEFIKNSALWPILREPYWCAIITFALHTAAYIAELLR 117 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 +I SIPKG+ +A+ A+G++ +R IILP+ +E I +LK +++ASTIT+ Sbjct: 118 GAIQSIPKGEIEAAKALGMSYPMMLRRIILPRAFGIMMPAYGNEVILMLKGSALASTITL 177 Query: 172 PEIFQTAQRIVSTTYQPLIIY 192 ++ A+ I++ TY PL I+ Sbjct: 178 LDLTGMARTIIARTYTPLEIF 198 >gi|76801539|ref|YP_326547.1| glutamine/glutamate/polar amino acids ABC transporter permease [Natronomonas pharaonis DSM 2160] gi|76557404|emb|CAI48981.1| ABC-type transport system permease protein II 2 (probable substrates glutamine/glutamate/polar amino acids) [Natronomonas pharaonis DSM 2160] Length = 325 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 17/202 (8%) Query: 33 VISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF 88 V+ + G FIAV R++ S + L + Y + RGTPLL QLFV++YGLP GI+ Sbjct: 113 VLGMFFGIFIAVPLSVARVYGSRPLRWLSLA-YTELIRGTPLLAQLFVLYYGLPLSGIIR 171 Query: 89 D------------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 + + +I T+N SAY +E IRS++ S+ GQ A+ ++GL++ ++I Sbjct: 172 ELPGVGVGPVPRAAVWVAVIGFTINSSAYQAEYIRSALQSVDAGQLTAARSVGLSKTESI 231 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 RH+ILPQ + + ++EFI ++K +S+A+ I +PE+F+ A+ I S T++ L +Y +A Sbjct: 232 RHVILPQGLRYAIPGWTNEFIYLIKYSSLAAFIAVPELFRRARNIGSDTFRYLEMYLIVA 291 Query: 197 FVYLILTSFCYIIQIKIESSVT 218 YL L ++ E V Sbjct: 292 LFYLALVLTLSVLMDSFEKRVA 313 >gi|169824809|ref|YP_001692420.1| amino acid ABC transporter permease [Finegoldia magna ATCC 29328] gi|167831614|dbj|BAG08530.1| amino acid ABC transporter permease protein [Finegoldia magna ATCC 29328] Length = 526 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 12/226 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-----------IISLI 57 I + + L ++TL IA +S +I +IG +AVIR D I+ I Sbjct: 288 IFNEYGSLFLKGALMTLFIASVSTIIGFLIGILVAVIRNMKLDKDKNKFTYYLHKFINFI 347 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV IFRGTP++VQ +I++G ++GI A + +++N AY+SE++R I S Sbjct: 348 LACYVEIFRGTPMMVQSMLIYFGAKLYLGIDMAPISAALFIVSVNTGAYLSEVVRGGINS 407 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + GQ +A A+G+T Q++ ++ILPQ I + +EF+ +K TSV + I++ E+F Sbjct: 408 VDVGQMEACKALGMTHSQSMINVILPQAIKNILPSIGNEFVINIKDTSVLNVISVTELFF 467 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 ++ I +TY Y +Y +LT I + IE Y Sbjct: 468 VSKSIAGSTYNIFETYAVTCVIYFVLTFSLTRILLYIEKKSNNKEY 513 >gi|268318927|ref|YP_003292583.1| hypothetical protein FI9785_433 [Lactobacillus johnsonii FI9785] gi|262397302|emb|CAX66316.1| unnamed protein product [Lactobacillus johnsonii FI9785] Length = 214 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 104/172 (60%), Gaps = 2/172 (1%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV 92 V+S+ +G +A + ++ I+ FYVWI RGTPLL+QL IFYGLP +GIVF + Sbjct: 28 VVSIPLGLLVA-FGLHSKLKLVKAILKFYVWIIRGTPLLLQLIFIFYGLPTVGIVFPRYE 86 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 A +++ +N++AY +EI R + ++P GQ++A+ +GL+R QTI I+ PQ + + Sbjct: 87 AALVAFIINYAAYFAEIFRGGLQAVPVGQFEAAQVLGLSRWQTINRIVRPQVVKIVLPSI 146 Query: 153 SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 +E I+++K +S+ I + ++ + A + + L+ + VYL +T+ Sbjct: 147 GNELINLVKDSSLVYVIGLGDLLR-AGNVATARDVSLVPLVLVGCVYLAMTA 197 >gi|238024355|ref|YP_002908587.1| polar amino acid family ABC transporter inner membrane subunit [Burkholderia glumae BGR1] gi|237879020|gb|ACR31352.1| ABC polar amino acid family transporter, inner membrane subunit [Burkholderia glumae BGR1] Length = 218 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 124/218 (56%), Gaps = 5/218 (2%) Query: 4 EWFNLIIDSFPQLLYAA-IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 W + I++ P LL A + V + I+C+ V+S ++G A++++ + + Sbjct: 2 RWSD-IVEFVPILLQGAGLTVFITISCL--VLSTMLGLVWALLKMS-RHAPVRRAAATLI 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RG P++V LF I++ LP IG+ + A I+ L +S Y++EIIRS I S+ GQ+ Sbjct: 58 NVVRGLPMIVLLFYIYFVLPSIGLQMSALQASIVGLAFGYSTYVAEIIRSGIESVDPGQY 117 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ +IG+ R +T+ +ILPQ I + P S+ +S+LK +S+ASTIT+ E+ + I Sbjct: 118 EAAQSIGMGRVKTMTRVILPQAIKVALPPYSNTLVSMLKDSSLASTITVSEMTRQGSLIA 177 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + T+Q L +Y +A YL ++ + +E +H Sbjct: 178 AATFQNLEVYTLVAIGYLAMSLPLMSLTKALERRFGKH 215 >gi|126724326|ref|ZP_01740169.1| ABC-type glutamine transport system, permease component [Rhodobacterales bacterium HTCC2150] gi|126705490|gb|EBA04580.1| ABC-type glutamine transport system, permease component [Rhodobacterales bacterium HTCC2150] Length = 253 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 77/207 (37%), Positives = 116/207 (56%), Gaps = 13/207 (6%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K W N+ + L + + T+ I+ I+ IS+I+G +A+ S ++ Y Sbjct: 33 KGGWTNV------KFLISGMASTIQISVIAAAISIILGLLVALPG-QSSKRGWRIVSRIY 85 Query: 62 VWIFRGTPLLVQLFVIFYGLP------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 V R PLL LF +FYGLP + I D F II+L ++ SA+ +EI RS I Sbjct: 86 VEFIRSIPLLPMLFWVFYGLPLIFKSMGLNIPIDPFWGAIITLAVSDSAFTAEIYRSGIQ 145 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SI KGQ +A+ +GL+ QT+R++ILPQ I P++++FI I+K ++ AS I + E+ Sbjct: 146 SISKGQTEAAQTVGLSYAQTMRYVILPQAIRRILPPIANQFIYIVKMSAFASVIGMQELT 205 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLIL 202 + A +V T Y+PL IY L YLIL Sbjct: 206 RRANELVVTEYRPLEIYSLLIVEYLIL 232 >gi|16759747|ref|NP_455364.1| glutamine ABC transporter permease [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764191|ref|NP_459806.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142480|ref|NP_805822.1| glutamine ABC transporter permease [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56414071|ref|YP_151146.1| glutamine ABC transporter permease [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161614919|ref|YP_001588884.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550478|ref|ZP_02344235.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992065|ref|ZP_02573163.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230731|ref|ZP_02655789.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236761|ref|ZP_02661819.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240697|ref|ZP_02665629.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263668|ref|ZP_02685641.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466430|ref|ZP_02700292.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820021|ref|ZP_02832021.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194445368|ref|YP_002040065.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448838|ref|YP_002044857.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194468570|ref|ZP_03074554.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194737623|ref|YP_002113920.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197249080|ref|YP_002145785.1| glutamine ABC transporter permease [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264015|ref|ZP_03164089.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197362994|ref|YP_002142631.1| glutamine ABC transporter permease [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198242595|ref|YP_002214792.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389501|ref|ZP_03216112.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929959|ref|ZP_03220980.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205352085|ref|YP_002225886.1| glutamine ABC transporter permease [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856265|ref|YP_002242916.1| glutamine ABC transporter permease [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213163838|ref|ZP_03349548.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213424778|ref|ZP_03357528.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213583835|ref|ZP_03365661.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213622114|ref|ZP_03374897.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213649898|ref|ZP_03379951.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|224582640|ref|YP_002636438.1| glutamine ABC transporter permease [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238913895|ref|ZP_04657732.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289809887|ref|ZP_06540516.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289823691|ref|ZP_06543303.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25296621|pir||AB0601 glutamine transport system permease protein GlnP STY0867 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16419335|gb|AAL19765.1| glutamine high-affinity transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502040|emb|CAD05276.1| glutamine transport system permease protein GlnP [Salmonella enterica subsp. enterica serovar Typhi] gi|29138111|gb|AAO69682.1| glutamine transport system permease protein GlnP [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56128328|gb|AAV77834.1| glutamine transport system permease protein GlnP [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161364283|gb|ABX68051.1| hypothetical protein SPAB_02673 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404031|gb|ACF64253.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407142|gb|ACF67361.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194454934|gb|EDX43773.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713125|gb|ACF92346.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631095|gb|EDX49681.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094471|emb|CAR59988.1| glutamine transport system permease protein GlnP [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197212783|gb|ACH50180.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197242270|gb|EDY24890.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290199|gb|EDY29556.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937111|gb|ACH74444.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199601946|gb|EDZ00492.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320953|gb|EDZ06154.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205271866|emb|CAR36702.1| glutamine transport system permease protein GlnP [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205324488|gb|EDZ12327.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329674|gb|EDZ16438.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334880|gb|EDZ21644.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339925|gb|EDZ26689.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343078|gb|EDZ29842.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347825|gb|EDZ34456.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708068|emb|CAR32359.1| glutamine transport system permease protein GlnP [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467167|gb|ACN44997.1| glutamine ABC transporter permease component [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246086|emb|CBG23888.1| glutamine transport system permease protein GlnP [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992575|gb|ACY87460.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157413|emb|CBW16902.1| glutamine transport system permease protein GlnP [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911852|dbj|BAJ35826.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085102|emb|CBY94889.1| L-cystine transport system permease protein tcyB [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226402|gb|EFX51453.1| Glutamate transport membrane-spanning protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323129135|gb|ADX16565.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326622545|gb|EGE28890.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627127|gb|EGE33470.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332987759|gb|AEF06742.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 219 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 123/220 (55%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P LL A +TL I+ + L+IG R F + I Sbjct: 1 MQFDW-SAIWPAIPLLLEGA-KMTLWISVLGLAGGLVIGLAAGFARTF-GGWFANHIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ I RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEIIRGTPIVVQVMFIYFALPMAFNDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R++TIRH+ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A YLI+T I ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMK 217 >gi|21228042|ref|NP_633964.1| glutamine transporter, permease [Methanosarcina mazei Go1] gi|20906475|gb|AAM31636.1| Glutamine transporter, permease protein [Methanosarcina mazei Go1] Length = 231 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 112/201 (55%), Gaps = 9/201 (4%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I+ FP LL A V+T+ + + LI+G IA I + YV RGTP Sbjct: 12 INVFPSLLRGA-VITIEVTTFAIFFGLILGT-IAAFGKLSKRAIFRIPSSVYVDFIRGTP 69 Query: 70 LLVQLFVIFYGLPH--IGIVFDSF-----VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 L VQ+ + +YG+P IGI + F +A I ++N AY +EI+R+ I S+ +GQ Sbjct: 70 LFVQILLFYYGIPGLIIGITGEPFRIDPILAGIAVCSINSGAYNAEIVRAGIKSVDRGQM 129 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ ++G+T Q ++ +I+PQ + PL +EFI++LK +S+ + I++ E+ + V Sbjct: 130 EAARSLGMTEGQAMKEVIMPQAVRLIIPPLGNEFIALLKDSSLLAVISVHELSKNGMLYV 189 Query: 183 STTYQPLIIYCELAFVYLILT 203 S T+ Y +AFVYL LT Sbjct: 190 SKTFAAFPTYISVAFVYLALT 210 >gi|13470760|ref|NP_102329.1| ABC transporter permease [Mesorhizobium loti MAFF303099] gi|14021503|dbj|BAB48115.1| probable permease of ABC transporter [Mesorhizobium loti MAFF303099] Length = 273 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/228 (29%), Positives = 126/228 (55%), Gaps = 12/228 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W + + + + VTL + IS V+ ++ +A R+ + I+S + + YV Sbjct: 45 FAWNPVFFAKYAPAYLSGLGVTLSLVAISMVLGAVLSMPVAYGRMS-RNRILSGLAYCYV 103 Query: 63 WIFRGTPLLVQLFVIFYGL----PHIGIVF------DSFVAIIISLTLNFSAYISEIIRS 112 + FRGTPLLVQ F+I+YGL P + ++ D+F + + LN +AY +EI+R Sbjct: 104 YFFRGTPLLVQTFLIYYGLGSFRPELQMIGLWDFFKDAFNCGVFAFALNTAAYQAEILRG 163 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I S+ +GQW+ + ++GL + QT+R IILPQ + + P +E I ++K++++ + IT+ Sbjct: 164 AIESVHRGQWEGAASLGLHKLQTLRKIILPQALIVALRPYGNELILMVKASAIVAIITVY 223 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ A+ + ++ + Y +A VYL++ IE +T H Sbjct: 224 DLMGNAKLAFANSFD-IQAYIWVALVYLVMVELLRHAIEWIERRITIH 270 >gi|222082455|ref|YP_002541820.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727134|gb|ACM30223.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 222 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 118/216 (54%), Gaps = 2/216 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+++D +P ++ A VT+ I + + + IIGF +AV R + ++ + F V I R Sbjct: 6 NVLLDQWPAIVSGA-GVTIMIWILGTIAAAIIGFLVAVGRQY-GGLLLDKTLGFVVAILR 63 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTP L+Q+F+++YG P +G+ D A +I +++ +AY SEI RS ++P+G +A Sbjct: 64 GTPFLIQIFLVYYGGPFVGLSLDPLPAGLIGISIYGAAYFSEIFRSGFQAVPRGHIEAGE 123 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +GLT+ Q +R I+LP+ P + I ++K T+V S IT+PE+ T I S Y Sbjct: 124 CVGLTQGQIVRRILLPEMTMLVLPPSLNMAIILMKETAVLSIITVPELTATLSAIGSQQY 183 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 + LA Y +L + E+ +++ + Sbjct: 184 AFVEALSMLALFYWVLVELTGWLGNLAETKLSRFRF 219 >gi|171059883|ref|YP_001792232.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix cholodnii SP-6] gi|170777328|gb|ACB35467.1| polar amino acid ABC transporter, inner membrane subunit [Leptothrix cholodnii SP-6] Length = 216 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 120/213 (56%), Gaps = 8/213 (3%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D F LL AA L ++ I+F+ ++G + + R+ + YV +F+GTPL Sbjct: 8 DIFRNLLLAARWTVL-LSLIAFIGGSVVGLALLLSRLAQWPGAQRAV-AVYVQVFQGTPL 65 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L+QLF+ ++GL GI ++VA ++LT SAY++EI R +++IPKGQW+A+ ++ L Sbjct: 66 LMQLFLAYFGLALFGINVSAWVAAGLALTFYASAYLTEIWRGCVMAIPKGQWEAADSLAL 125 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + + +RH+I PQ + + P + ++K T++AS I E+ + I + T++P Sbjct: 126 SFGEKMRHVIGPQALRIAVPPTVGFLVQVIKGTALASVIGFIELTKAGTMITNATFRPFT 185 Query: 191 IYCELAFVYLILTSFCYIIQI---KIESSVTQH 220 +Y +A +Y +L C+ + K+E S + Sbjct: 186 VYACVAVMYFVL---CWPVSAYARKLERSFKRE 215 >gi|168177791|ref|ZP_02612455.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum NCTC 2916] gi|226947681|ref|YP_002802772.1| amino acid ABC transporter permease [Clostridium botulinum A2 str. Kyoto] gi|182671578|gb|EDT83552.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum NCTC 2916] gi|226841874|gb|ACO84540.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A2 str. Kyoto] Length = 211 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 100/165 (60%), Gaps = 5/165 (3%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + +I+ Y WIFRGTPL++QLF ++GLP IGI + A ++ +N+ AY++E R+ Sbjct: 47 LKIILSAYTWIFRGTPLMLQLFFAYFGLPAIGIRLEPLTAAYLTFIINYGAYLAETFRAG 106 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SI KGQ +A+ +G T QT+ II+PQ I P+ +E I+++K +++ + I I + Sbjct: 107 IESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKDSALVAAIGIGD 166 Query: 174 IFQTAQRIVST--TYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 I + A+ +V+ T P I A +YL++T+F +I +E Sbjct: 167 ILRAAKEVVTRDFTITPFFI---AAAIYLLITAFLVLIFRTLEKK 208 >gi|311071035|ref|YP_003975958.1| putative ABC transporter permease [Bacillus atrophaeus 1942] gi|310871552|gb|ADP35027.1| putative ABC transporter permease [Bacillus atrophaeus 1942] Length = 224 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 123/219 (56%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W +I +FP L+ A+ +TL +A + + ++I G +A+I ++ + Y+ Sbjct: 5 DW-GFMISAFPTLV-GALPITLFMAVAAMIFAVIGGLVLALITKNHIP-VLHQLSKVYIS 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI---IISLTLNFSAYISEIIRSSIISIPKG 120 FRG P LVQLF+I+YGLP + A+ II L+L +AY++EI R+++ S+ +G Sbjct: 62 FFRGVPTLVQLFLIYYGLPQLFPEMSKMTALTAAIIGLSLKNAAYLAEIFRAALNSVDEG 121 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A ++G+T+ Q R IILPQ + + + FI +LK TS+A T+ + E+F + Sbjct: 122 QLEACLSVGMTKLQAYRRIILPQAVRNAIPATGNTFIGLLKETSLAFTLGVMEMFAQGKM 181 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S + Y +A VY ILT ++Q E ++++ Sbjct: 182 YASGNLKYFETYLAVAVVYWILTIIYSVLQDLFERAISK 220 >gi|229587938|ref|YP_002870057.1| putative ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229359804|emb|CAY46654.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 319 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 122/199 (61%), Gaps = 8/199 (4%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ +S ++ L IG + R+ + T+ L YV + RGTPLLVQ+F+ ++ Sbjct: 124 TLWLSVVSGILGLAIGLATGLCRLSSNPTLRDLST-IYVELVRGTPLLVQIFIFYF---F 179 Query: 84 IGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IG V + A I +L+L AY++EI+R+ + SI +GQ +A+ ++GL+ Q++RH++L Sbjct: 180 IGTVLNLSREFAGIAALSLFTGAYVAEIVRAGVQSITRGQNEAARSLGLSASQSMRHVVL 239 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL-IIYCELAFVYL 200 PQ PL+ +FIS++K TS+ S I I E+ ++ + +++T++ P I++C +A +YL Sbjct: 240 PQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFC-VAGLYL 298 Query: 201 ILTSFCYIIQIKIESSVTQ 219 ++ + ++E + Q Sbjct: 299 LINLPLSKMASRLERRLAQ 317 >gi|50913614|ref|YP_059586.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes MGAS10394] gi|50902688|gb|AAT86403.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes MGAS10394] Length = 528 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 10/211 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISLIMHFYVWIFRGTPLLVQ 73 +TL I+ + + L IG I + R + ++ Y+ IFRGTP++VQ Sbjct: 304 MTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEIFRGTPMIVQ 363 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 VI+YG GI D +A I +++N AY+SEI+R I ++ KGQ++A+ A+G T Sbjct: 364 SMVIYYGTAQAFGISIDRTLAAIFIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTH 423 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+R I+LPQ + +EF+ +K TSV + I++ E++ + + + TYQ + Sbjct: 424 GQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTF 483 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 +A +Y +LT I IE TY+ Sbjct: 484 TIIAIIYFVLTFTVTRILRHIERRFDADTYT 514 >gi|325685428|gb|EGD27529.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 213 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 99/161 (61%), Gaps = 5/161 (3%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +++FYVW+ RGTPLL+QL +FYGLP +G+ F ++A +++ LN++AY +EI R + Sbjct: 50 LLNFYVWLMRGTPLLLQLIFVFYGLPIVGLTFPRYMAALVAFVLNYTAYFAEIFRGGNQA 109 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ++A+ + LT QT+R I++PQ I + +E I+++K +S+ I + ++ + Sbjct: 110 IDRGQFEAAKVLQLTYGQTLRKIVIPQVIKIVLPSIGNEVINLVKDSSLVYVIGLGDLLR 169 Query: 177 TAQRIVST--TYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + T PL++ +A +YL L C ++ ++E Sbjct: 170 AGNLATARDVTLVPLVL---VALIYLFLIGLCTLLLRQLEK 207 >gi|306828018|ref|ZP_07461284.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pyogenes ATCC 10782] gi|304429799|gb|EFM32842.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pyogenes ATCC 10782] Length = 522 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 10/211 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISLIMHFYVWIFRGTPLLVQ 73 +TL I+ + + L IG I + R + ++ Y+ IFRGTP++VQ Sbjct: 298 MTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEIFRGTPMIVQ 357 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 VI+YG GI D +A I +++N AY+SEI+R I ++ KGQ++A+ A+G T Sbjct: 358 SMVIYYGTAQAFGISIDRTLAAIFIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTH 417 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+R I+LPQ + +EF+ +K TSV + I++ E++ + + + TYQ + Sbjct: 418 GQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTF 477 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 +A +Y +LT I IE TY+ Sbjct: 478 TIIAIIYFVLTFTVTRILRHIERRFDADTYT 508 >gi|296876762|ref|ZP_06900810.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 15912] gi|296432264|gb|EFH18063.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 15912] Length = 213 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 116/207 (56%), Gaps = 3/207 (1%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 ++ P LL A +TL + ++S+ +G +A + + I+ ++ Y+W+ RGTP Sbjct: 5 LEILPSLLKGA-SLTLQVFAFVLILSIPLGIVVAFL-LQLRSKILHGLLTIYIWVMRGTP 62 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+QL I+Y LP IGI D A I++ TLN++AY +EI R I++IP GQ++A+ + Sbjct: 63 LLLQLIFIYYVLPSIGIRIDRLPAAIMAFTLNYAAYFAEIFRGGIVAIPTGQYEAAKVLK 122 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+ QTIR+IILPQ + + +E +S++K TS+ + I ++ A R + L Sbjct: 123 LSSWQTIRYIILPQVVKIVLPSVFNEVMSLIKDTSLVYALGISDLI-LASRTAANRDASL 181 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESS 216 +YLIL II ++E + Sbjct: 182 APMFLAGAIYLILIGIVTIIAKRVEKN 208 >gi|302337319|ref|YP_003802525.1| polar amino acid ABC transporter inner membrane protein [Spirochaeta smaragdinae DSM 11293] gi|301634504|gb|ADK79931.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 219 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 62/180 (34%), Positives = 102/180 (56%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 L + IS + +LIIG + +IR + I+ I YV R TPLLVQL+ +F+GLP Sbjct: 23 ALSASIISLLFALIIGLVVGIIR-YSHKGILGTIAKIYVSAIRNTPLLVQLYFVFFGLPR 81 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +GIV +F +I L+ N AYI+E++++ +IP+GQ +A+ +IGL+ Q R I++PQ Sbjct: 82 LGIVLSAFQTGVIGLSFNSGAYIAEMVKAGFQAIPRGQIEAAESIGLSVHQRFRLILIPQ 141 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + + ++K T + S + I EI + A + + TY L + +YLI+ Sbjct: 142 AALQIVPAVGGQMVQLIKDTCLLSLLAITEITKAATEVGNKTYMFLQAFLFAGIIYLIVN 201 >gi|219871254|ref|YP_002475629.1| arginine transporter permease subunit ArtM [Haemophilus parasuis SH0165] gi|219691458|gb|ACL32681.1| arginine transporter permease subunit ArtM [Haemophilus parasuis SH0165] Length = 227 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/215 (32%), Positives = 121/215 (56%), Gaps = 13/215 (6%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLL 71 Q + I +P + + +SLI+ FF+AV F + ++ I++ ++ +F GTPLL Sbjct: 3 QEYFMVIAQGIPTSLLLTFVSLIVAFFLAVGMTFLLSMENRLVKGIVNGFLTLFTGTPLL 62 Query: 72 VQLFVIFYG---------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 VQ F+I+ G P ++ D++ +++L LN +AY + + ++ +IPKGQW Sbjct: 63 VQFFLIYAGPGQFPWIVASPFWSLLSDAWFCAMLTLALNSAAYTTLLFHGAVKAIPKGQW 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + A+GL+R QT++ I++P + + S+E I + K TS+ASTITI +I A+++ Sbjct: 123 ETCAALGLSRLQTLK-ILVPYALKRALPSYSNEIILVFKGTSLASTITIMDIMGYARQLY 181 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 T Y L IY VYL++T +I ++E V Sbjct: 182 GTEYDALTIYGLAGAVYLVITGIMTVILRRVERKV 216 >gi|241113571|ref|YP_002973406.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861779|gb|ACS59445.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 219 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + + P LL +TL + +++I+G +A+ R IS + F Sbjct: 1 MEWDW-DFVWQIMPTLL-EGFKITLLATILGAAVAMIVGLGLAIAR-RSPVAGISRTVAF 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL+ IFY LP IGI VA +I + ++++ Y +E+ R+ I ++P+G Sbjct: 58 VSEFIRGTPLLVQLYFIFYVLPDIGIRLAPLVAGVIGMGIHYATYTAEVYRAGIENVPRG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A LT +Q H+ILPQ I L++ FI++ K T + S IT+ E+ A+ Sbjct: 118 QWEAAKATNLTTRQAWIHVILPQAIPPMIPALANYFIAMFKETPLLSAITVLELMNQAKS 177 Query: 181 IVSTTYQ 187 I ++ Y+ Sbjct: 178 IANSNYR 184 >gi|94993627|ref|YP_601725.1| amino acid ABC transporter permease/substrate-binding protein [Streptococcus pyogenes MGAS10750] gi|94547135|gb|ABF37181.1| ABC transporter amino acid-binding protein / Amino acid ABC transporter permease protein [Streptococcus pyogenes MGAS10750] Length = 528 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 10/211 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISLIMHFYVWIFRGTPLLVQ 73 +TL I+ + + L IG I + R + ++ Y+ IFRGTP++VQ Sbjct: 304 MTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEIFRGTPMIVQ 363 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 VI+YG GI D +A I +++N AY+SEI+R I ++ KGQ++A+ A+G T Sbjct: 364 SMVIYYGTAQAFGISIDRTLAAIFIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTH 423 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+R I+LPQ + +EF+ +K TSV + I++ E++ + + + TYQ + Sbjct: 424 GQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTF 483 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 +A +Y +LT I IE TY+ Sbjct: 484 TIIAIIYFVLTFTVTRILRHIERRFDADTYT 514 >gi|257387737|ref|YP_003177510.1| polar amino acid ABC transporter inner membrane subunit [Halomicrobium mukohataei DSM 12286] gi|257170044|gb|ACV47803.1| polar amino acid ABC transporter, inner membrane subunit [Halomicrobium mukohataei DSM 12286] Length = 338 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 127/222 (57%), Gaps = 16/222 (7%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I+ P + A + T+ + S V+ L I ++V R++ I+ + Y + RGTP Sbjct: 110 IEGGPAMAAGAFI-TVYLTLASMVLGLAIAVPLSVARVY-GGRIVGTVSLAYTELVRGTP 167 Query: 70 LLVQLFVIFYGLP------HIGIVFDS-------FVAIIISLTLNFSAYISEIIRSSIIS 116 LL QLF+++YGLP +G+V + FVAI+ T+N SAY +E IR ++ S Sbjct: 168 LLAQLFLLYYGLPLAEEIEGLGLVGEGAVPRAAVFVAIV-GFTINSSAYQAEYIRGALQS 226 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + GQ A+ +IGL++ IRH++LPQ + + ++EF+ ++K +S+A+ IT+PE+F+ Sbjct: 227 VDSGQLVAARSIGLSKAAGIRHVVLPQGLRYAIPGWTNEFVYLIKYSSLAAFITVPELFR 286 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 A+ I S +++ Y +A +YL L + ++E++V Sbjct: 287 QARIIASDSFRVTDTYVVVAVLYLALVLTTALAMDRLEAAVA 328 >gi|153953343|ref|YP_001394108.1| amino acid ABC transporter permease [Clostridium kluyveri DSM 555] gi|146346224|gb|EDK32760.1| Predicted amino acid ABC transporter, permease protein [Clostridium kluyveri DSM 555] Length = 212 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 64/185 (34%), Positives = 114/185 (61%), Gaps = 6/185 (3%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 ++T+ + I+ + S+ +G +AV +I + +I+ Y W FRGTPLL+QLF ++GL Sbjct: 16 LITIELFLITAIFSIPLGGIVAVGKIS-KIKPLKVILSLYTWAFRGTPLLLQLFFAYFGL 74 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 P IGI A ++ T+N++AY++EI R+ I SI +GQ++A+ A+G+ +TI II+ Sbjct: 75 PVIGIRLSPLAAASLAFTINYAAYLAEIFRAGIESIDRGQFEAAKALGMNYYETITKIII 134 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST--TYQPLIIYCELAFVY 199 PQ I + +E I+++K +++ +TI + ++ + A+ +V+ T P I L Y Sbjct: 135 PQAIRNVLPAVCNESINLVKDSALVATIGVGDLLRAAKEVVTRDFTITPFFIAAAL---Y 191 Query: 200 LILTS 204 L++TS Sbjct: 192 LLITS 196 >gi|149912071|ref|ZP_01900662.1| amino acid ABC transproter, permease protein [Moritella sp. PE36] gi|149804867|gb|EDM64904.1| amino acid ABC transproter, permease protein [Moritella sp. PE36] Length = 189 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 63/143 (44%), Positives = 94/143 (65%), Gaps = 4/143 (2%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH--- 83 +A I V +LII +AV+R F + L M ++ FRGTPLLVQLF+++YGLP Sbjct: 1 MALIGVVFALIIAIGLAVVRTFKVPVLNQLAM-LFISFFRGTPLLVQLFLLYYGLPRVFP 59 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 I I D+F A +I LTL+F+AY +E IR++I+++ K Q +A+ +IG+T Q +R I+LPQ Sbjct: 60 ILIHMDAFTASVIGLTLHFAAYKAESIRAAIMAVDKSQMEAALSIGMTTSQAMRRIVLPQ 119 Query: 144 TITTSAVPLSSEFISILKSTSVA 166 + L + FI ++KSTS+A Sbjct: 120 AARIATPSLMNYFIDMIKSTSLA 142 >gi|271500409|ref|YP_003333434.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270343964|gb|ACZ76729.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 223 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 114/204 (55%), Gaps = 4/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M+Y+W F+ + +P LL + T+ I S +I ++ G +A +++ S + L H Sbjct: 1 MRYQWDFSALPHWWP-LLLDGLWGTVRIGFTSILIGMLTGVLLATMKLS-STRLWRLPAH 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ +R TP +V F I+Y LP I + F A + +L+ +A+ +E+ R I+SI Sbjct: 59 LFIGFYRNTPAIVHFFWIYYALPVISPLTLSPFAAAVTALSAQSAAFYAEVYRGGILSIA 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW+ + A+G++R +R +ILPQ + PL ++KSTS+AS++ E+ A Sbjct: 119 EGQWEGAKALGMSRPLALRRVILPQALRRMIPPLIERSFELIKSTSLASSLAYGELLYQA 178 Query: 179 QRIVSTTYQPLIIYCELAFVYLIL 202 +I S +++PL IY A +Y L Sbjct: 179 MQINSQSFRPLEIYSLAALLYFTL 202 >gi|153833012|ref|ZP_01985679.1| amino acid ABC transporter, permease protein [Vibrio harveyi HY01] gi|148870733|gb|EDL69639.1| amino acid ABC transporter, permease protein [Vibrio harveyi HY01] Length = 265 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 69/194 (35%), Positives = 121/194 (62%), Gaps = 4/194 (2%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 + +P L ++VTL I+ IS +L+IG A++R+ S + + I YV + R TPL Sbjct: 54 EWWPAELIEGLIVTLKISAISLFFTLVIGLVTALLRLSNSK-VGNAIGTTYVELIRNTPL 112 Query: 71 LVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LVQ++++++ P IG+ D F +++L+L AY +EI R+ + SIPKGQ++A+ ++G Sbjct: 113 LVQIYLLYFVFGPVIGL--DRFSTAVLALSLFQGAYTAEIFRAGLNSIPKGQFEAAKSLG 170 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+ + +ILPQ + + PL++E +S++K++S+ S + I ++ A+ IVS T P Sbjct: 171 LSPLFAYKDVILPQVLQRTLPPLTNEVVSLIKNSSIVSVMAIFDLTTEARNIVSETAMPF 230 Query: 190 IIYCELAFVYLILT 203 I+ +A +YL LT Sbjct: 231 EIWFTVAAIYLALT 244 >gi|261377615|ref|ZP_05982188.1| amino acid ABC transporter, permease protein [Neisseria cinerea ATCC 14685] gi|269146368|gb|EEZ72786.1| amino acid ABC transporter, permease protein [Neisseria cinerea ATCC 14685] Length = 219 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 62/184 (33%), Positives = 108/184 (58%), Gaps = 12/184 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-----IRIFFSDTIISLIMHFYVW 63 +ID+ P+ + AA +TL ++ V+SL+ G +AV IR F++ + Y+ Sbjct: 6 LIDAIPKFVDAA-KLTLELSAYGIVLSLLFGLPVAVVTAYRIRPFYA------LARTYIE 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + R TPLL+QLF ++YGLP +GI +D F +I+L ++Y++E IR+ I+++PKGQ + Sbjct: 59 LSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVIALVFLGASYMAEAIRAGILAVPKGQIE 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A AIGL + Q R++ LPQ + + + + ++K TS+ S + I E+ + I+ Sbjct: 119 AGKAIGLNQFQVFRYVELPQAWAVAVPAIGANVLFLMKETSIVSAVGIAELLFVTKDIIG 178 Query: 184 TTYQ 187 Y+ Sbjct: 179 MDYK 182 >gi|94987869|ref|YP_595970.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes MGAS9429] gi|94541377|gb|ABF31426.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes MGAS9429] Length = 528 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 10/211 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISLIMHFYVWIFRGTPLLVQ 73 +TL I+ + + L IG I + R + ++ Y+ IFRGTP++VQ Sbjct: 304 MTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEIFRGTPMIVQ 363 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 VI+YG GI D +A I +++N AY+SEI+R I ++ KGQ++A+ A+G T Sbjct: 364 SMVIYYGTAQAFGISIDRTLAAIFIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTH 423 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+R I+LPQ + +EF+ +K TSV + I++ E++ + + + TYQ + Sbjct: 424 GQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTF 483 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 +A +Y +LT I IE TY+ Sbjct: 484 TIIAIIYFVLTFTVTRILRHIERRFDADTYT 514 >gi|227544223|ref|ZP_03974272.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300908218|ref|ZP_07125684.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] gi|227185794|gb|EEI65865.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300894645|gb|EFK88001.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] Length = 215 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 98/161 (60%), Gaps = 5/161 (3%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ YVW+ RGTPLL+QL +FYGLP IGIVF+ + A +++ LN++AY +EI R S Sbjct: 52 VLEIYVWLMRGTPLLLQLIFVFYGLPIIGIVFERYDAALVAFILNYAAYFAEIFRGGFQS 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + +GQ++A+ + L+ QT+R II+PQ I + +E I+++K +S+ I + ++ + Sbjct: 112 VDQGQFEAARVLRLSYWQTLRKIIIPQVIKIVIPSIGNEVINLVKDSSLVYVIGLGDLLR 171 Query: 177 TAQRIVS--TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 S T PL++ + +YLIL C +I ++E Sbjct: 172 AGNVATSRDVTLVPLML---VGLIYLILVGICTLILRQVEK 209 >gi|254421950|ref|ZP_05035668.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC 7335] gi|196189439|gb|EDX84403.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC 7335] Length = 240 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/217 (33%), Positives = 120/217 (55%), Gaps = 7/217 (3%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F++I D+F L+ A +TL ++ ++ L+IG ++ R + +++ I Sbjct: 17 MHYSFDFSVIWDNFGVLI-AGAWLTLRLSLLAVAFGLVIGIIGSLFRTS-GNRLLNGIAL 74 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV I R TP L+QLF IF+GLP +G+ + A I+SL +NF AY +EI+R+ + SIPK Sbjct: 75 AYVEIIRNTPYLIQLFFIFFGLPALGLKLSAEQAAIVSLAINFGAYSTEIVRAGVESIPK 134 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A AIG + RHI++P + L + I + TSV S I ++ Sbjct: 135 GQVEAGLAIGFNKLDVFRHIVIPPALANIYSSLVGQVILAVLFTSVVSQIAAEDLTYAGN 194 Query: 180 RIVSTTYQPLIIYCELAFVYL----ILTSFCYIIQIK 212 + + T++ IY LA +YL I+ + Y+I+ + Sbjct: 195 YLDARTFRSFEIYFTLAILYLAIVWIVKALAYVIEAR 231 >gi|139473094|ref|YP_001127809.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pyogenes str. Manfredo] gi|134271340|emb|CAM29558.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pyogenes str. Manfredo] Length = 522 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 10/211 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISLIMHFYVWIFRGTPLLVQ 73 +TL I+ + + L IG I + R + ++ Y+ IFRGTP++VQ Sbjct: 298 MTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEIFRGTPMIVQ 357 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 VI+YG GI D +A I +++N AY+SEI+R I ++ KGQ++A+ A+G T Sbjct: 358 SMVIYYGTAQAFGISIDRTLAAIFIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTH 417 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+R I+LPQ + +EF+ +K TSV + I++ E++ + + + TYQ + Sbjct: 418 GQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTF 477 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 +A +Y +LT I IE TY+ Sbjct: 478 TIIAIIYFVLTFTVTRILRHIERRFDADTYT 508 >gi|94989745|ref|YP_597845.1| amino acid ABC transporter permease [Streptococcus pyogenes MGAS10270] gi|94543253|gb|ABF33301.1| ABC transporter amino acid-binding protein / Amino acid ABC transporter permease protein [Streptococcus pyogenes MGAS10270] Length = 528 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 10/211 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISLIMHFYVWIFRGTPLLVQ 73 +TL I+ + + L IG I + R + ++ Y+ IFRGTP++VQ Sbjct: 304 MTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEIFRGTPMIVQ 363 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 VI+YG GI D +A I +++N AY+SEI+R I ++ KGQ++A+ A+G T Sbjct: 364 SMVIYYGTAQAFGISIDRTLAAIFIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTH 423 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+R I+LPQ + +EF+ +K TSV + I++ E++ + + + TYQ + Sbjct: 424 GQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTF 483 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 +A +Y +LT I IE TY+ Sbjct: 484 TIIAIIYFVLTFTVTRILRHIERRFDADTYT 514 >gi|71902896|ref|YP_279699.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes MGAS6180] gi|71801991|gb|AAX71344.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes MGAS6180] Length = 528 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 10/211 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISLIMHFYVWIFRGTPLLVQ 73 +TL I+ + + L IG I + R + ++ Y+ IFRGTP++VQ Sbjct: 304 MTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEIFRGTPMIVQ 363 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 VI+YG GI D +A I +++N AY+SEI+R I ++ KGQ++A+ A+G T Sbjct: 364 SMVIYYGTAQAFGISIDRTLAAIFIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTH 423 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+R I+LPQ + +EF+ +K TSV + I++ E++ + + + TYQ + Sbjct: 424 GQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTF 483 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 +A +Y +LT I IE TY+ Sbjct: 484 TIIAIIYFVLTFTVTRILRHIERRFDADTYT 514 >gi|261400795|ref|ZP_05986920.1| amino acid ABC transporter, permease protein [Neisseria lactamica ATCC 23970] gi|269209397|gb|EEZ75852.1| amino acid ABC transporter, permease protein [Neisseria lactamica ATCC 23970] Length = 219 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 123/221 (55%), Gaps = 12/221 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-----IRIFFSDTIISLIMHFYVW 63 +ID+ P+ AA +TL ++ V+SL+ G +AV IR F++ + Y+ Sbjct: 6 LIDAVPKFSDAA-KLTLELSVYGVVLSLLFGLPVAVVTAYRIRPFYA------LARAYIE 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + R TPLL+QLF ++YGLP +GI +D F +I+L ++Y++E +R+ I+++PKGQ + Sbjct: 59 LSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVIALVFLGASYMAEAVRAGILAVPKGQVE 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A AIGL+R Q R++ LPQ + +++ + ++K TSV S + I E+ + ++ Sbjct: 119 AGKAIGLSRFQVFRYVELPQAWAVAFPAVAANILFLMKETSVISAVGIAELLFVTKDVIG 178 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 Y+ L YLI+ ++ ++E+ + Y + Sbjct: 179 MDYKTNEALFLLFAAYLIILLPVSLLVRRLENRIRSAKYGI 219 >gi|62179394|ref|YP_215811.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127027|gb|AAX64730.1| ABC superfamily (membrane), glutamine high-affinity transporter [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322713865|gb|EFZ05436.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 219 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 123/220 (55%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P LL A +TL I+ + L+IG R F + I Sbjct: 1 MQFDW-SAIWPAIPLLLEGA-KMTLWISVLGLAGGLVIGLAAGFARTF-GGWFANHIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ I RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEIIRGTPIVVQVMFIYFALPMAFNDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R++TIRH+ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A YLI+T I ++E + Sbjct: 178 QEIIAGNFRSLEIWSAVAVFYLIITLVLSFILRRLERRMK 217 >gi|330967850|gb|EGH68110.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 221 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 68/197 (34%), Positives = 113/197 (57%), Gaps = 9/197 (4%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + + P L A+ VTL + I+ + SL + A I +F ++ ++ YV + R TP Sbjct: 9 LSTLPAFL-KAVGVTLQVGLIAILTSLTVAIVNAAIAMF-RVPVLHRLVPVYVELARNTP 66 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+QLF I++ LP +GI F + +I++T AY++EI+R+ I ++PK Q ++ +IG Sbjct: 67 LLIQLFFIYFALPTMGIRVSGFASAVIAMTFLGGAYLTEILRAGIEAVPKAQIESGLSIG 126 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+R Q +RH+ILPQ S L + F+ +LK T+V S + +PEI T + ++ Y+ Sbjct: 127 LSRWQLLRHVILPQAGILSLPALFANFVFLLKETTVVSAVAVPEILYTTKSYIALYYK-- 184 Query: 190 IIYCELAFVYLILTSFC 206 Y LA ++T C Sbjct: 185 -TYEMLA----VMTGLC 196 >gi|148545553|ref|YP_001265655.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida F1] gi|148509611|gb|ABQ76471.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida F1] Length = 229 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 123/207 (59%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +I P+L A V+TL + I+ V LI+ + + R + + Y++ F Sbjct: 3 WEVIFKWLPRLAEGA-VLTLELVAIAVVAGLILAIPLGIARSS-RHWYVRAVPFSYIFFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+++YGL V D F ++++TL+ +AYI+EI+R ++ + Sbjct: 61 RGTPLLVQLFLVYYGLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQA 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKG+ +A+ A+G++R +T+ +I+LP+ S+E I +LK++++AST+T+ E+ Sbjct: 121 IPKGEIEAARALGMSRGKTLFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I++ TY P+ I+ YL+++ Sbjct: 181 MARTIIARTYLPVEIFFAAGVFYLVIS 207 >gi|312865611|ref|ZP_07725836.1| ABC transporter, permease protein [Streptococcus downei F0415] gi|311098879|gb|EFQ57098.1| ABC transporter, permease protein [Streptococcus downei F0415] Length = 514 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 115/211 (54%), Gaps = 10/211 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISLIMHFYVWIFRGTPLLVQ 73 +TL I+ + ++ L+IG I V R + + I++ Y+ IFRGTP++VQ Sbjct: 299 ITLLISIVGTLVGLVIGLLIGVYRTAPQAGNKALALLQKVFGWILNVYIEIFRGTPMIVQ 358 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 VI+YG G+ D A I +++N AY+SEI+R I ++ KGQ++A+ A+G + Sbjct: 359 AMVIYYGTAQAFGVNLDRTWAAIFIVSINTGAYMSEIVRGGIYAVDKGQFEAATALGFSH 418 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+R ++LPQ + +EF+ +K TSV + I++ E++ + + + TY+ + Sbjct: 419 GQTMRKVVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYKYFQTF 478 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 +A +Y ILT I +E + Q Y+ Sbjct: 479 LIIAVIYFILTFTVTRILRYLEHRLDQDNYT 509 >gi|302023524|ref|ZP_07248735.1| amino acid ABC transporter permease protein [Streptococcus suis 05HAS68] Length = 174 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 58/160 (36%), Positives = 96/160 (60%), Gaps = 1/160 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++HFYV I RGTPLL+QL ++Y LP +GI+FD A+I++ TLN++AY SEI R I + Sbjct: 11 LLHFYVLIMRGTPLLLQLIFVYYVLPSVGIIFDRMPAVILAFTLNYAAYFSEIFRGGIEA 70 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQ++A+ + T QTIR+I+LPQ + + +E ++++K TS+ + + ++ Sbjct: 71 IPKGQYEAAKVLKFTPVQTIRYIVLPQVVKIVLPSVFNEVMTLVKDTSLVYALGVSDLL- 129 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 A R + L +YL++ +I ++E Sbjct: 130 LASRTAANRDASLAPMFIAGAIYLLMIGAVTLISKQVEKK 169 >gi|315302221|ref|ZP_07873138.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria ivanovii FSL F6-596] gi|313629411|gb|EFR97627.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria ivanovii FSL F6-596] Length = 480 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 70/217 (32%), Positives = 124/217 (57%), Gaps = 3/217 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 + +I S+P LL A + +T+ +A +S +I+ IIG +++ S I+ I YV I Sbjct: 266 FMGIIKSSWPALL-AGMWLTIRLAVVSLIIAFIIGITFGFMKVSNS-KILRGIATVYVDI 323 Query: 65 FRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTPL+VQ F ++G+P + F+A +I+L+LN AY+ EI+R I S+ KGQ + Sbjct: 324 FRGTPLIVQAFFFYFGIPAALDFRMPVFLAGVIALSLNAGAYMVEIVRGGIQSVDKGQME 383 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++GL K+ + ++LPQ I ++F+ LK TS+ S I + E+ Q+ + I++ Sbjct: 384 AARSLGLPHKKAMLKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQSGKIIMA 443 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T++ + + +YLI+ + + ++E V Sbjct: 444 RTFESTWTWLIIGIMYLIVITILTKVSDRLERRVRND 480 >gi|164686605|ref|ZP_02210633.1| hypothetical protein CLOBAR_00197 [Clostridium bartlettii DSM 16795] gi|164604334|gb|EDQ97799.1| hypothetical protein CLOBAR_00197 [Clostridium bartlettii DSM 16795] Length = 252 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 78/216 (36%), Positives = 112/216 (51%), Gaps = 16/216 (7%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD--------- 51 M EW I + +TL I+ I VI IIG I VIR Sbjct: 1 MSSEWIVKIASQNWKGFLNGAEMTLYISLIGTVIGSIIGMLIGVIRTIPKGERGAKKVIL 60 Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEII 110 TII+ I++ YV FRGTP++VQ VI+YG GI D A I +++N AY++EI+ Sbjct: 61 TIINAILNAYVEFFRGTPMIVQAMVIYYGSDLAFGIDMDRTFAAIFIVSINTGAYMAEIV 120 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R IISI KGQ++A+ AIG+ QT+ +++LPQ I +EF+ +K TSV + I Sbjct: 121 RGGIISIDKGQFEAAQAIGMNHIQTMINVVLPQVIRNILPATGNEFVINIKDTSVLNVIG 180 Query: 171 IPEIFQTAQRIVSTT---YQPLIIYCELAFVYLILT 203 + E++ T + I ++ I C VY I+T Sbjct: 181 VTELYFTTKSIAGNNFRYFESFFITC---IVYFIMT 213 >gi|307547047|ref|YP_003899526.1| ABC transporter permease [Halomonas elongata DSM 2581] gi|307219071|emb|CBV44341.1| ABC-type transport system permease protein [Halomonas elongata DSM 2581] Length = 223 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 60/144 (41%), Positives = 92/144 (63%), Gaps = 1/144 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ +FRGTP+LVQ+ IFYGLP + G ++ VA I ++ +N AYISEI+R + SI + Sbjct: 62 YIEVFRGTPVLVQVLFIFYGLPQLLGGPINALVAGIAAIAVNSGAYISEIVRGGVQSIER 121 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A ++GL+R QT R+II PQ PL ++ I +K TS+ S I + E+ + Q Sbjct: 122 GQKEAGLSLGLSRVQTFRYIIWPQAFRRMIPPLGNQGIISIKDTSLFSVIGVGELVRQGQ 181 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 ++TT+ L +Y +A +YL +T Sbjct: 182 IYIATTFTALEVYLMVAMLYLAIT 205 >gi|238750615|ref|ZP_04612115.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia rohdei ATCC 43380] gi|238711263|gb|EEQ03481.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia rohdei ATCC 43380] Length = 219 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 64/199 (32%), Positives = 113/199 (56%), Gaps = 8/199 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF--- 60 ++F L+ P L+ A+ A +S +++++ GFFI V+ F Sbjct: 3 DFFQLLSGWLPMLIDGAVTT----ASLS-ILAIVAGFFIGVVIYLMESGHSGFGRGFARV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ +FRGTP+L Q+ + FY +G+ ++A +++LT N +AY S+I+RS +I G Sbjct: 58 YISLFRGTPVLAQVLLCFYLPGELGLSLPGYLAAVMALTFNTAAYQSQILRSGFKAIAPG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ GL+ +QT+ HI +PQ + + L SE I ++K+++V S I I ++ + Q+ Sbjct: 118 QLEAAAMCGLSSRQTLWHIQIPQVLRLTMPSLISELIDVIKASAVVSVIAITDLMRVGQQ 177 Query: 181 IVSTTYQPLIIYCELAFVY 199 + S TY+PL +Y +A Y Sbjct: 178 LASATYRPLEVYVAIALSY 196 >gi|227820423|ref|YP_002824394.1| amino acid ABC transporter permease [Sinorhizobium fredii NGR234] gi|227339422|gb|ACP23641.1| probable amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 323 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 64/196 (32%), Positives = 117/196 (59%), Gaps = 1/196 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +V TL I+ IS ++ II A+ ++ + +I FY +FRG PLL+Q+++I+ Sbjct: 121 GVVTTLYISVISIAVATIIALAGAIAKLS-KNGVIYGFATFYTSLFRGLPLLMQIYIIYL 179 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP +G V + A I++L+L + AY++EI R+ I SIP+GQ + + A+GL+ QT+ + Sbjct: 180 GLPQVGYVISAVPAGILALSLCYGAYMTEIFRAGIESIPRGQTEGATALGLSPAQTMGLV 239 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + P ++FI++LK +S+ S + + E+ A+ T ++ + + + +Y Sbjct: 240 ILPQAMRVIIPPTGNQFIAMLKDSSLVSVVGVWELMYLARTQGQTEFRHIEMLITASMIY 299 Query: 200 LILTSFCYIIQIKIES 215 +L+ +Q +IE+ Sbjct: 300 WLLSVCLEFLQSRIEA 315 >gi|206895967|ref|YP_002246908.1| glutamine ABC transporter, permease protein [Coprothermobacter proteolyticus DSM 5265] gi|206738584|gb|ACI17662.1| glutamine ABC transporter, permease protein [Coprothermobacter proteolyticus DSM 5265] Length = 216 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 120/203 (59%), Gaps = 3/203 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + W L++ FP +L++ + TL + S ++ L+ G +A+++I ++ I+ I Sbjct: 1 MDFRW-ELLVTIFP-ILWSGFLTTLGLTLSSLLVGLVFGLILALMKIS-TNWILKGISIA 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + RGTP L+Q+ ++++GLP +G+ D A +++L LN +AY EI R+ I SI +G Sbjct: 58 YIELIRGTPALMQIMLVYFGLPALGLNIDRLTAAVVALGLNSAAYSGEIFRAGIESIDRG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ AIG+T +R I+LPQ PL +EF+++LK TS+ S I + ++ ++ Sbjct: 118 QMEAARAIGMTGSMAMRLIVLPQAFRVVIPPLVNEFVALLKDTSLVSVIGVADLMLRSRN 177 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 ++S T + +YL+ T Sbjct: 178 MISYTANVFTPLLGASILYLLAT 200 >gi|170698798|ref|ZP_02889861.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170136276|gb|EDT04541.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 297 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 113/204 (55%), Gaps = 14/204 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY---- 79 T+ + ++ + +++G AV+R+ S+ ++ I Y+W+FRGTP+++QL + F Sbjct: 81 TIVMTVLAMTLGVVLGVVTAVMRLS-SNPVLGAIAQGYIWLFRGTPVILQLLLWFNLALV 139 Query: 80 ----GLPHIG-----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 G+P I V F+A ++ L +N AY SE++R+ ++S+ GQ++A+ +IG+ Sbjct: 140 FPTLGIPGIAEYRTVDVMTPFLAAVLGLGINQGAYTSEVVRAGLLSVDTGQYEAAKSIGM 199 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 R Q +R IILPQ + P+ +E I ++K TS+AS + E+ AQ I + + Sbjct: 200 ARLQALRRIILPQAMRVIVPPIGNELIGMVKLTSLASVVQYAEMLHNAQNIYYANARVIE 259 Query: 191 IYCELAFVYLILTSFCYIIQIKIE 214 + YL++ + + Q ++E Sbjct: 260 LLIVAGIWYLVVVTVLSLAQARVE 283 >gi|170719628|ref|YP_001747316.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169757631|gb|ACA70947.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 320 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 67/198 (33%), Positives = 117/198 (59%), Gaps = 6/198 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ +S + L+IG F + R+ + T+ L YV + RGTPLLVQ+F+ ++ Sbjct: 125 TLWISVVSGALGLVIGLFAGLCRLSNNPTLRDLST-VYVELVRGTPLLVQIFIFYF---F 180 Query: 84 IGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IG V + A + +L L AY++EI+R+ + SI KGQ +A+ ++GL Q++RH+IL Sbjct: 181 IGTVLNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNASQSMRHVIL 240 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ PL+ +FIS++K TS+ S I I E+ ++ + ++T++ I+ +A +YL+ Sbjct: 241 PQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWFCVAGLYLL 300 Query: 202 LTSFCYIIQIKIESSVTQ 219 + + ++E + Q Sbjct: 301 INLPLSHLASRLERRLAQ 318 >gi|289672927|ref|ZP_06493817.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae FF5] Length = 192 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 64/178 (35%), Positives = 105/178 (58%), Gaps = 2/178 (1%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I + P L A+ VTL + I+ + SL + A I F ++ ++ YV + R TP Sbjct: 9 ISTLPAFL-KAVGVTLQVGLIAILTSLTVAVVNAAIATF-KVPVLHRLVPVYVELARNTP 66 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+QLF I++ LP +GI F + +I++T AY++EI+R+ I ++PK Q ++ +IG Sbjct: 67 LLIQLFFIYFALPTLGIRVSGFASAVIAMTFLGGAYLTEILRAGIEAVPKAQIESGLSIG 126 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 L+R Q +RH+ILPQ S L + F+ +LK T+V S + +PEI T + ++ Y+ Sbjct: 127 LSRWQLLRHVILPQAGILSLPALFANFVFLLKETTVVSAVAVPEILYTTKSYIALYYK 184 >gi|170691133|ref|ZP_02882299.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170144382|gb|EDT12544.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 216 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 60/170 (35%), Positives = 97/170 (57%), Gaps = 1/170 (0%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV 92 V +IG AV+R F + Y +FRGTP+L+ L I++G+ + G D F Sbjct: 29 VGGTLIGLLAAVLR-SFGPWGTPTVARLYTELFRGTPVLITLMFIYFGVSYFGYAIDVFA 87 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 A ++ L++ AYI+E+ RS I ++PKGQW+ + +GL++ Q +ILPQT PL Sbjct: 88 AGVVGLSVYQGAYIAEVFRSGIEAVPKGQWEVAQILGLSKTQAFFSVILPQTGKIVMPPL 147 Query: 153 SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 +++S++K TS+ S I + E+ Q IV +P+ IY +A +Y I+ Sbjct: 148 IGQYLSLIKDTSIVSMIGMSELMHGGQAIVDRIGKPVEIYGLVAVLYFIV 197 >gi|68535882|ref|YP_250587.1| putative ABC transport system, permease protein [Corynebacterium jeikeium K411] gi|68263481|emb|CAI36969.1| putative ABC transport system, permease protein [Corynebacterium jeikeium K411] Length = 315 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 70/233 (30%), Positives = 133/233 (57%), Gaps = 29/233 (12%) Query: 3 YEW---FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 Y W F ++D+ + A + T+ + ++ +I ++IG +AV+R+ + ++ + Sbjct: 52 YHWDTYFQYLLDT---RIVKAAMHTIALTILAMIIGVVIGAIVAVLRMS-PNPVLQGVAW 107 Query: 60 FYVWIFRGTPLLVQLFVIFYGL-----PHIGIVF----------DSFVAIIISLTLNFSA 104 ++W+FRGTP+ VQL +F+GL + + F ++F+ ++ L LN +A Sbjct: 108 LFLWVFRGTPVYVQL--VFWGLLSSLYQSVSVGFAEINLEQVLQNAFILAVLGLGLNEAA 165 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 Y++EI+R+ I ++P+GQ +AS A+G+T Q +R ++PQ + P +EFIS+LK+TS Sbjct: 166 YMAEIVRAGIQAVPEGQSEASKALGMTWGQNMRRTVMPQAMRIIIPPTGNEFISLLKTTS 225 Query: 165 VASTITIP---EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + I +P E++ A I ++ +QP+ + A YL++TS + Q +E Sbjct: 226 L--VIAVPYTAELYGRATDISNSLFQPVPLLLVAATWYLVITSILMVGQFYVE 276 >gi|152978297|ref|YP_001343926.1| arginine transporter permease subunit ArtM [Actinobacillus succinogenes 130Z] gi|150840020|gb|ABR73991.1| polar amino acid ABC transporter, inner membrane subunit [Actinobacillus succinogenes 130Z] Length = 228 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 129/229 (56%), Gaps = 25/229 (10%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLI 57 M Y++F +I P ++++T V++L++ FF+A++ F ++ I Sbjct: 1 MAYDYFKIIAQGIP----TSLILT--------VVALVVAFFMALLCTFLLSMNNKIAQSA 48 Query: 58 MHFYVWIFRGTPLLVQLFVIFYG---------LPHIGIVFDSFVAIIISLTLNFSAYISE 108 + ++ +F GTPLLVQ F+I+ G P ++ +++ +++L LN +AY ++ Sbjct: 49 VKMFITLFTGTPLLVQFFLIYAGPGQFQWIVNSPLWSLLSNAWFCAMLALALNSAAYSTQ 108 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 + ++ +IPKGQW++ A+GL+R QT++ I++P + + S+E I + K TS+AST Sbjct: 109 LFHGAVKAIPKGQWESCAALGLSRLQTLK-ILIPYALKRALPSYSNEIILVFKGTSLAST 167 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 ITI +I A+++ T Y L IY +YL++T ++ K+E V Sbjct: 168 ITILDIMGYARQLYGTEYDALTIYGIAGVIYLVITGIATLLLRKLEKRV 216 >gi|156977165|ref|YP_001448071.1| ABC transporter ATP-binding/permease protein [Vibrio harveyi ATCC BAA-1116] gi|156528759|gb|ABU73844.1| hypothetical protein VIBHAR_05951 [Vibrio harveyi ATCC BAA-1116] Length = 265 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 69/194 (35%), Positives = 121/194 (62%), Gaps = 4/194 (2%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 + +P L ++VTL I+ IS +L+IG A++R+ S + + I YV + R TPL Sbjct: 54 EWWPAELIEGLIVTLKISAISLFFTLVIGLVTALLRLSNSK-VGNAIGTTYVELIRNTPL 112 Query: 71 LVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LVQ++++++ P IG+ D F +++L+L AY +EI R+ + SIPKGQ++A+ ++G Sbjct: 113 LVQIYLLYFVFGPVIGL--DRFSTAVLALSLFQGAYTAEIFRAGLNSIPKGQFEATKSLG 170 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+ + +ILPQ + + PL++E +S++K++S+ S + I ++ A+ IVS T P Sbjct: 171 LSPLFAYKDVILPQVLQRTLPPLTNEVVSLIKNSSIVSVMAIFDLTTEARNIVSETAMPF 230 Query: 190 IIYCELAFVYLILT 203 I+ +A +YL LT Sbjct: 231 EIWFTVAAIYLALT 244 >gi|259046945|ref|ZP_05737346.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Granulicatella adiacens ATCC 49175] gi|259036388|gb|EEW37643.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Granulicatella adiacens ATCC 49175] Length = 218 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 114/207 (55%), Gaps = 3/207 (1%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 ++ P LL+ A V TL + + + S+ +G IA + ++ ++H Y+W+ RGTP Sbjct: 10 LEILPSLLHGA-VTTLEVFALVLIFSIPLGILIA-FAMQLKWKPLNWLIHIYIWVMRGTP 67 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+QL I+Y LP +GI D A +I+ TLN++AY +EI R I +IPKGQ++A+ + Sbjct: 68 LLLQLIFIYYVLPSVGIRLDRLPAALIAFTLNYAAYFAEIFRGGIDTIPKGQYEAAKVLK 127 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 T TIR+I+LPQ + +E +S++K TS+ + I ++ A R + L Sbjct: 128 FTPGATIRYIVLPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLI-LASRTAANRDASL 186 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESS 216 + +YLI+ ++ +IE Sbjct: 187 VPMFLAGAIYLIVIGVVTLVAKRIEKK 213 >gi|219853972|ref|YP_002471094.1| hypothetical protein CKR_0629 [Clostridium kluyveri NBRC 12016] gi|219567696|dbj|BAH05680.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 215 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 64/185 (34%), Positives = 114/185 (61%), Gaps = 6/185 (3%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 ++T+ + I+ + S+ +G +AV +I + +I+ Y W FRGTPLL+QLF ++GL Sbjct: 19 LITIELFLITAIFSIPLGGIVAVGKIS-KIKPLKVILSLYTWAFRGTPLLLQLFFAYFGL 77 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 P IGI A ++ T+N++AY++EI R+ I SI +GQ++A+ A+G+ +TI II+ Sbjct: 78 PVIGIRLSPLAAASLAFTINYAAYLAEIFRAGIESIDRGQFEAAKALGMNYYETITKIII 137 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST--TYQPLIIYCELAFVY 199 PQ I + +E I+++K +++ +TI + ++ + A+ +V+ T P I L Y Sbjct: 138 PQAIRNVLPAVCNESINLVKDSALVATIGVGDLLRAAKEVVTRDFTITPFFIAAAL---Y 194 Query: 200 LILTS 204 L++TS Sbjct: 195 LLITS 199 >gi|116873682|ref|YP_850463.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742560|emb|CAK21684.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria welshimeri serovar 6b str. SLCC5334] Length = 486 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 114/184 (61%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++T+ +A I + I+G +A++++ + + Y+ RGTPLL+Q+F++F+ Sbjct: 286 GTLITIALAAIGVLCGAILGSLLALMKLAKT-RWLRWPAACYIEFVRGTPLLIQIFIVFF 344 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G IG+ +FV+ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+T++ ++R+I Sbjct: 345 GTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQRASMRYI 404 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L +EF++++K +S+ S I + E+ + +++P I + +Y Sbjct: 405 ILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIY 464 Query: 200 LILT 203 +LT Sbjct: 465 FVLT 468 >gi|220929987|ref|YP_002506896.1| polar amino acid ABC transporter inner membrane subunit [Clostridium cellulolyticum H10] gi|220000315|gb|ACL76916.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium cellulolyticum H10] Length = 221 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 66/190 (34%), Positives = 117/190 (61%), Gaps = 6/190 (3%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + V T+ IA ++ ++ +IIG +A+++I + I+ I Y+ RGTPLLVQ+ + F Sbjct: 15 SGTVNTIVIAILTVILGVIIGTGLALMKIS-RNKILRAIASSYIEFIRGTPLLVQITLFF 73 Query: 79 Y--GLP--HI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 Y LP HI G+ D ++ +I++++N AY++EIIR+ I ++ KGQ +A+ +IG T Sbjct: 74 YLISLPEFHIFGLAMDRYIPGVIAMSVNSGAYVAEIIRAGIQAVDKGQMEAARSIGFTSG 133 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q +R+I+LPQ I L +EF+ ++K +S+ S I+I E+ +++ + + Y+P Sbjct: 134 QAMRYIVLPQAIRNILPALGNEFVVVIKESSILSVISITELMRSSDIVKAAIYRPFEPLI 193 Query: 194 ELAFVYLILT 203 A +Y +LT Sbjct: 194 VTACIYFVLT 203 >gi|260102961|ref|ZP_05753198.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus DSM 20075] gi|260083246|gb|EEW67366.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus DSM 20075] Length = 215 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 60/169 (35%), Positives = 103/169 (60%), Gaps = 5/169 (2%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 I +++FYVWI RGTPLL+QL +FYGLP I IVF + A +++ LN++AY +EI R Sbjct: 49 IKWLVNFYVWIMRGTPLLLQLIFVFYGLPIIHIVFPRYQAALLAFVLNYAAYFAEIFRGG 108 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 SI +GQ++A+ + L+R QT+ I++PQ I + +E I+++K +S+ I + + Sbjct: 109 FQSIDEGQFEAAKVLRLSRWQTMTKIVIPQVIKIVLPSIGNEVINLVKDSSLVYVIGLGD 168 Query: 174 IFQTAQRIVS--TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + + ++ T PL++ + +YL+L S C + K+E V+ + Sbjct: 169 LLRAGNVAMARDVTLVPLVL---VGVIYLLLISICAFVLKKLEKHVSYY 214 >gi|50086542|ref|YP_048052.1| amino acid ABC transporter membrane protein [Acinetobacter sp. ADP1] gi|49532516|emb|CAG70230.1| putative amino acid transport protein (ABC superfamily, membrane) [Acinetobacter sp. ADP1] Length = 221 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 64/171 (37%), Positives = 100/171 (58%), Gaps = 4/171 (2%) Query: 37 IIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIII 96 I G I ++RI D I+ + Y+ F+GTPLL+QLF+ F+GL +GI + A Sbjct: 35 ICGLLILMLRIN-PDPILQKVAIVYIEFFQGTPLLIQLFMTFFGLSLLGIDISPWTAAAF 93 Query: 97 SLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF 156 SLT +AY +EI R + SIP GQW+A+ ++ +TR Q R++ILPQ I + P Sbjct: 94 SLTAYAAAYFAEIWRGCVQSIPVGQWEAAASLAMTRLQQFRYVILPQAIRIAIAPTVGFS 153 Query: 157 ISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + I+K+T+V S I E+ +T + + T++P +++ +A Y IL CY Sbjct: 154 VQIVKATAVTSIIGFTELTKTGSVLANATFEPFLVFGLVAIGYFIL---CY 201 >gi|330958424|gb|EGH58684.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 216 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 85/143 (59%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ FR TPL+VQL+V+F+ LP G+ F + +I L ++AYI+E R +I IP G Sbjct: 58 YLSFFRNTPLMVQLYVLFFALPLAGVAFPAITTGVIGLGCYYAAYIAEACRGAIEDIPAG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A+ R T R IILPQ + L + I + K T + + ITIPE+FQ A++ Sbjct: 118 QWEAARALDFDRGDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVITIPELFQAAKQ 177 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I TY+ Y +A ++L ++ Sbjct: 178 IAGMTYRYNEPYTVMALMFLAIS 200 >gi|330901550|gb|EGH32969.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] Length = 221 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 69/197 (35%), Positives = 112/197 (56%), Gaps = 9/197 (4%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I + P L A+ VTL + I+ + SL + A I F ++ ++ YV + R TP Sbjct: 9 ISTLPAFL-KAVGVTLQVGLIAILTSLTVAVVNAAIATF-KVPVLHRLVPVYVELARNTP 66 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+QLF I++ LP +GI F + +I++T AY++EI+R+ I ++PK Q ++ +IG Sbjct: 67 LLIQLFFIYFALPTLGIRVSGFASAVIAMTFLGGAYLTEILRAGIEAVPKAQIESGLSIG 126 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+R Q +RH+ILPQ S L + F+ +LK T+V S + +PEI T + ++ Y+ Sbjct: 127 LSRWQLLRHVILPQAGILSLPALFANFVFLLKETTVVSAVAVPEILYTTKSYIALYYK-- 184 Query: 190 IIYCELAFVYLILTSFC 206 Y LA ++T C Sbjct: 185 -TYEMLA----VMTGLC 196 >gi|304396808|ref|ZP_07378688.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304355604|gb|EFM19971.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 222 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 123/219 (56%), Gaps = 2/219 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + I+ + P L + VTL + ++ + SL+ G +A I + + ++ Y + Sbjct: 4 WQAILTALPSL-GEGMAVTLQLCAVAALCSLLWGIIMA-IGMLRAPHFWRKLLRLYSALT 61 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 + PLLV ++++++ LP I S A +++LTL ++ Y++++IRS+I ++P+GQW+A Sbjct: 62 QALPLLVVIYLLYFVLPDYNITLSSPQAGVLALTLYYAPYVAQVIRSAIETLPRGQWEAC 121 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GL+R + +R + LPQT+ PL I ++K +++ S +++ E A+ +S T Sbjct: 122 RVLGLSRMEQLRDVALPQTLPQMLSPLVGLLIGLIKDSALLSIVSVQEFMYAAKEAISET 181 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 Y PL IY +A Y L S + +IE +T++ ++ Sbjct: 182 YAPLEIYLTVALSYWALNSLLDGLTRRIEFRMTRYRRTL 220 >gi|161504005|ref|YP_001571117.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865352|gb|ABX21975.1| hypothetical protein SARI_02098 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 219 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 123/220 (55%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P LL A +TL I+ + L+IG R F + I Sbjct: 1 MQFDW-SAIWPAIPLLLEGA-KMTLWISILGLAGGLVIGLAAGFARTF-GGWFANHIALI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ I RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEIIRGTPIVVQVMFIYFALPMAFNDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R++TIRH+ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A YLI+T I ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMK 217 >gi|323339490|ref|ZP_08079769.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ruminis ATCC 25644] gi|323093104|gb|EFZ35697.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ruminis ATCC 25644] Length = 215 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 124/212 (58%), Gaps = 7/212 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + I + P LL +TL I ++ V SL +G A+ R I++ ++ FY+W+ R Sbjct: 2 DYIFEIMPSLL-DGTEMTLSIFVLTLVFSLPLGLICALGRCS-KFKILNAVLRFYIWLMR 59 Query: 67 GTPLLVQLFVIFYGLPHIG--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 GTPLL+QL +FYGLP +G IV + A +++ LN++AY +EI R + SI +GQ+++ Sbjct: 60 GTPLLLQLIFVFYGLPLLGTGIVLPRYAAALVAFVLNYTAYFAEIFRGGLQSIDRGQYES 119 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + + LT QTIR II PQ + + +E I+++K +S+ I + ++ + A + S+ Sbjct: 120 ARVLRLTYWQTIRKIIAPQVMKIVVPSIGNEVINLIKDSSLVYVIGLGDLLR-AGNVASS 178 Query: 185 TYQPLIIYCELAFVYLILTS-FCYIIQIKIES 215 LI + +YL LT+ F +++Q K+E+ Sbjct: 179 RDVSLIPLVLVGIIYLALTAVFTWMLQ-KVEA 209 >gi|121608947|ref|YP_996754.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121553587|gb|ABM57736.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 291 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 119/210 (56%), Gaps = 14/210 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + +V T+ ++ ++ + +++G AV+R+ S+ ++ + YVW+FRGTP+++QL + F Sbjct: 70 SGLVNTVVMSILAMALGVVLGVVTAVMRVS-SNPVLGWVARTYVWLFRGTPVILQLLLWF 128 Query: 79 Y---GLPHIGI----------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 LP +GI V F+A ++ L +N AY SE++R+ ++S+ GQ++A+ Sbjct: 129 NLALVLPTLGIPGVWEVRTVDVMSPFLAALLGLGINQGAYTSEVVRAGLLSVDAGQYEAA 188 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IG+ R +R +ILPQ + P+ +EF+ ++K TS+AS I EI AQ I Sbjct: 189 KSIGMPRMLALRRVILPQAMRVIIPPIGNEFVGMIKLTSLASVIQYAEILHNAQNIYYAN 248 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + + + Y+ + + ++Q ++ES Sbjct: 249 ARVIELLIVAGIWYIAVVTVLALLQSRVES 278 >gi|331017861|gb|EGH97917.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 215 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 62/184 (33%), Positives = 110/184 (59%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ ++F+ +IG + V+R + L Y+ +F+GTPLL+QLF++F+G+ Sbjct: 19 TLALSLVAFIGGGLIGLLVMVMRTS-EKSGPRLAAKLYIELFQGTPLLMQLFLVFFGVAL 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ + A ++LTL SAY++EI R + SI KGQW+AS ++ +T + +R++ILPQ Sbjct: 78 MGMDISPWAAAALALTLFTSAYLAEIWRGCVESISKGQWEASASLAMTPLEQMRYVILPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T+V S I E+ +T + + T++P ++Y +A Y IL Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGSMLANATFEPFMVYGFVALGYFIL- 196 Query: 204 SFCY 207 CY Sbjct: 197 --CY 198 >gi|160935368|ref|ZP_02082750.1| hypothetical protein CLOBOL_00263 [Clostridium bolteae ATCC BAA-613] gi|158441726|gb|EDP19426.1| hypothetical protein CLOBOL_00263 [Clostridium bolteae ATCC BAA-613] Length = 224 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 1/197 (0%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I++ P LL A+V +L + F +SL G + +R I YV + R TP Sbjct: 9 IENLPALLKGALV-SLELTLTVFALSLFFGTIVGFLRYNKHHKAGYRIATVYVELIRNTP 67 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +LVQ+F +++GLP I + A I+ LT+N +AYI+EI+RS I SIPKGQW+A+ +G Sbjct: 68 MLVQIFFLYFGLPQFKIYLPALFAGILGLTINNTAYIAEIVRSGIQSIPKGQWEAANCLG 127 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L T +I PQ + L ++FI IL TS+ S + I ++ Q A + S ++ L Sbjct: 128 LKPIHTFLDVIFPQALRNIFPSLINQFIMILFGTSLLSVLDIKDLTQVASILNSQNFRTL 187 Query: 190 IIYCELAFVYLILTSFC 206 ++ +Y I++ C Sbjct: 188 ELFTFAIGIYYIMSVIC 204 >gi|229593272|ref|YP_002875391.1| putative ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229365138|emb|CAY53377.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 216 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 108/184 (58%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ ++FV +IG + +RI + Y+ +F+GTP+L+QLF++F+G+ Sbjct: 20 TLLLSLVAFVGGGVIGLLVMTMRIS-RKAFPRNVARTYIELFQGTPVLMQLFLVFFGIAL 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ ++A I+LTL SAY++EI R + SI GQW+AS ++ L + +R++ILPQ Sbjct: 79 LGVDISPWLAAAIALTLFTSAYLAEIWRGCVDSIAHGQWEASASLALNPLEQLRYVILPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T+V S I E+ +T + + T++P ++Y +A Y +L Sbjct: 139 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGGMLANATFEPFMVYGLVALGYFLL- 197 Query: 204 SFCY 207 CY Sbjct: 198 --CY 199 >gi|56964695|ref|YP_176426.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16] gi|56910938|dbj|BAD65465.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16] Length = 221 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 126/214 (58%), Gaps = 2/214 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 NL I+SFP +L + TL +A IS I+L+ GF +A+ R+ + + ++ R Sbjct: 7 NLAIESFPFIL-KGLQYTLFVAVISMAIALVFGFILALGRMS-KQAYVRIPCMLFISFNR 64 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G P+L+ LF+++ LP G + A I+ +LN SAY++E+ RS++ ++ +GQ +A+ Sbjct: 65 GVPILLLLFLLYAALPEFGFQLSAVAAAIVGFSLNTSAYVAEVNRSALAAVDRGQHEAAA 124 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL++ + ++HIILPQ + + PLS+ F+S++K TS+ASTI +PE+ A+ + + Sbjct: 125 SLGLSKTKAMQHIILPQAVRIALPPLSNIFLSLVKMTSIASTIALPELMYQARIVGGREF 184 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + A +Y + S ++Q +E ++ Sbjct: 185 NYFTVLIVAALIYWGICSLLSLLQRYLEKRFNRY 218 >gi|218462904|ref|ZP_03502995.1| nopaline ABC transporter, permease protein [Rhizobium etli Kim 5] Length = 249 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 118/201 (58%), Gaps = 14/201 (6%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + P+ L +V+T F +S+ + F A + S +++ Y + FRGTPLL Sbjct: 12 TLPRGLLLTLVLTFASLAAGFAVSVPLAFLRASSNPWASAPVLA-----YTYAFRGTPLL 66 Query: 72 VQLFVIFYGLPHIGIVFDSFVAII---------ISLTLNFSAYISEIIRSSIISIPKGQW 122 VQLF+I+YG+ + +V SF+ + I+ TLN +A+ +E++R I ++P+GQ Sbjct: 67 VQLFLIYYGIGQLPLVRQSFLWAVMREPFWCAFIAFTLNSAAHTTEVLRGGIQAVPRGQI 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ ++GL+R T R I+ P T+ + ++E + +LK++S+ASTIT+ E+ A+++V Sbjct: 127 EAAKSLGLSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTITLLEVTGLARQLV 186 Query: 183 STTYQPLIIYCELAFVYLILT 203 S T+ P ++ Y++LT Sbjct: 187 SETFAPYEVFIAAGAFYMLLT 207 >gi|221069034|ref|ZP_03545139.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas testosteroni KF-1] gi|264676835|ref|YP_003276741.1| glutamine-binding periplasmic protein [Comamonas testosteroni CNB-2] gi|299529655|ref|ZP_07043092.1| glutamine-binding periplasmic protein [Comamonas testosteroni S44] gi|220714057|gb|EED69425.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas testosteroni KF-1] gi|262207347|gb|ACY31445.1| glutamine-binding periplasmic protein [Comamonas testosteroni CNB-2] gi|298722518|gb|EFI63438.1| glutamine-binding periplasmic protein [Comamonas testosteroni S44] Length = 217 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 62/190 (32%), Positives = 115/190 (60%), Gaps = 9/190 (4%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A +VTL + I+ +S+ +G +A++RI S +S + Y+W+ RGTPL++QL ++ Sbjct: 13 AGALVTLKLFFITLALSIPMGLALALMRIS-SIKPLSSAVGAYIWLMRGTPLMLQLLFVY 71 Query: 79 YGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 + LP +IG+ F A +++ LN++AY +EI R+ I S+ +GQ++ + +G+T QT Sbjct: 72 FALPFVPYIGVRLPDFPAAVVAFALNYAAYFAEIFRAGIKSVDRGQYEGAKVLGMTYAQT 131 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST--TYQPLIIYC 193 +R I+LPQ P+S+E I+++K TS+ + + ++ + A+ +V ++ P I+ Sbjct: 132 MRRIVLPQMWARILPPVSNETITLVKDTSLIYVLALNDLLRVARGVVQRDFSFTPFIVAA 191 Query: 194 ELAFVYLILT 203 YLI+T Sbjct: 192 AF---YLIMT 198 >gi|67459548|ref|YP_247172.1| amino acid ABC transporter permease [Rickettsia felis URRWXCal2] gi|75536048|sp|Q4UKC4|GLNP_RICFE RecName: Full=Putative glutamine transport system permease protein glnP gi|67005081|gb|AAY62007.1| Amino acid ABC transporter permease protein [Rickettsia felis URRWXCal2] Length = 218 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 123/207 (59%), Gaps = 7/207 (3%) Query: 5 WFNLIIDSFPQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 F +I +P++L+ +VTL + I+ + L+IG +A+ ++ + + L +FY Sbjct: 1 MFEYLIKFYPKILFIVEGTLVTLKYSVIAVIFGLVIGMLLAICKVN-KNRALRLFANFYT 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 IFRGTPLL+QL +I++ P+I G+ F F+A IS +LN AY+SE+IR+ I ++ KGQ Sbjct: 60 SIFRGTPLLIQLSIIYFASPYIIGVKFSVFMAGAISFSLNSGAYVSEVIRAGINAVDKGQ 119 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++A+ A+ + + ++ IILPQ + L +E ++++K +++ S + ++ + AQ + Sbjct: 120 FEAAVALAIPKFLIMKDIILPQAVKNIFPSLVNELVNLVKESAIISMLGEMDLMRRAQIV 179 Query: 182 VSTTYQ---PLIIYCELAFVYLILTSF 205 TY P+ I ++ ++L SF Sbjct: 180 SIETYNYFFPMFIAACCYYILVMLISF 206 >gi|328463948|gb|EGF35458.1| amino acid ABC transporter, permease protein [Lactobacillus helveticus MTCC 5463] Length = 215 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 60/169 (35%), Positives = 103/169 (60%), Gaps = 5/169 (2%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 I +++FYVWI RGTPLL+QL +FYGLP I IVF + A +++ LN++AY +EI R Sbjct: 49 IKWLVNFYVWIMRGTPLLLQLIFVFYGLPIIHIVFPRYQAALLAFVLNYAAYFAEIFRGG 108 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 SI +GQ++A+ + L+R QT+ I++PQ I + +E I+++K +S+ I + + Sbjct: 109 FQSIDEGQFEAAKVLHLSRWQTMTKIVIPQVIKIVLPSIGNEVINLVKDSSLVYVIGLGD 168 Query: 174 IFQTAQRIVS--TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + + ++ T PL++ + +YL+L S C + K+E V+ + Sbjct: 169 LLRAGNVAMARDVTLVPLVL---VGVIYLLLISICAFVLKKLEKHVSYY 214 >gi|325273126|ref|ZP_08139423.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] gi|324101731|gb|EGB99280.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] Length = 229 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 122/207 (58%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +I P+L A V+TL + I+ V LI+ + + R + + Y++ F Sbjct: 3 WEVIFKWLPRLAEGA-VLTLELVAIAVVAGLILAIPLGIARSS-RHWYVRAVPFSYIFFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+++YGL V D F ++++TL+ +AYI+EI+R ++ S Sbjct: 61 RGTPLLVQLFLVYYGLAQFDAVRSSALWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQS 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKG+ +A+ A+G++R +T+ +I+LP+ S+E I +LK++++AST+T+ E+ Sbjct: 121 IPKGEIEAARALGMSRGKTLFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I++ TY P+ I+ YL ++ Sbjct: 181 MARTIIARTYLPVEIFFAAGVFYLAIS 207 >gi|319782448|ref|YP_004141924.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168336|gb|ADV11874.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 223 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 63/183 (34%), Positives = 107/183 (58%), Gaps = 2/183 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F I++ P L +V T+ ++ +SFV +LI+G + + + + Y+ Sbjct: 7 FRTIVEYLP-LFGQGLVTTVWLSALSFVGALIVGIVLCAMNLQ-RGWLFRAPAKAYIDAV 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL QL+ +++GLP +G V V I++L+LN AYI+EIIR+ I+SIP+GQ +AS Sbjct: 65 RATPLLAQLYFLYFGLPRLGFVLPELVVGILALSLNSGAYIAEIIRAGILSIPRGQVEAS 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A G+T Q +R ++LPQ + PL + I ++K +++ S I++ E+ + Q + S Sbjct: 125 VASGMTYVQRMRLVVLPQAFKVTIPPLLGQAIVLVKDSALLSLISVSELTRAGQLLASDR 184 Query: 186 YQP 188 + P Sbjct: 185 FMP 187 >gi|296877417|ref|ZP_06901454.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 15912] gi|296431578|gb|EFH17388.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 15912] Length = 520 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 73/230 (31%), Positives = 118/230 (51%), Gaps = 11/230 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTII 54 + ++ D+ PQ L +TL I+ + LIIG I V R + T Sbjct: 280 QMMKILKDNGPQFLRG-TGMTLLISMTGTIAGLIIGLLIGVFRTAPKAKNKFLAGCQTAF 338 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 ++ Y+ IFRGTP++VQ VIFYG I D A I +++N AY+SEI+R Sbjct: 339 GWFLNVYIEIFRGTPMIVQSMVIFYGSAQAFNISLDRTWAAIFIVSINTGAYMSEIVRGG 398 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I+++ GQ++A+ A+G+T QT+R ++LPQ + +EF +K TSV + I++ E Sbjct: 399 ILAVDPGQFEAATALGMTHGQTMRKVVLPQVVRNILPATGNEFGINIKDTSVLNVISVVE 458 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 ++ T + + YQ + +A +Y +LT I IE + TY+ Sbjct: 459 LYFTGNTVATQNYQYFPTFTIIAVIYFVLTFTITRILRYIERRLDSDTYT 508 >gi|251796880|ref|YP_003011611.1| polar amino acid ABC transporter inner membrane protein [Paenibacillus sp. JDR-2] gi|247544506|gb|ACT01525.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. JDR-2] Length = 217 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 119/210 (56%), Gaps = 2/210 (0%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D+F ++ V T+ + ++ + S +G IAV RI S + I YV R PL Sbjct: 9 DNF-EIYMKGFVNTIWSSVVALLGSFALGTIIAVFRIS-SVKPLRWIGTAYVEFVRNIPL 66 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L+ +FV +YGLP +G+ F+ + LT+ +++++E IR+ I+SIP GQ +A+ A GL Sbjct: 67 LLVVFVFYYGLPSLGVTLSGFICGTVGLTVYTASFVAEAIRAGIMSIPTGQTEAARASGL 126 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T QT+RH++LPQ + PLS++FI+++K++S+ ++ ++ S TY Sbjct: 127 TYTQTMRHVVLPQAVKIVIPPLSNQFINLVKNSSILGVFAGFDLMYYGDQVASKTYATFD 186 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y +A +YL+LT +K+E + ++ Sbjct: 187 TYIFVAALYLVLTIPLSFAALKLERRLAKN 216 >gi|290957468|ref|YP_003488650.1| binding-protein-dependent transporter [Streptomyces scabiei 87.22] gi|260646994|emb|CBG70093.1| putative binding-protein-dependent transporter [Streptomyces scabiei 87.22] Length = 313 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 128/219 (58%), Gaps = 22/219 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + ++ TL + +S VI ++ G +AV+R+ + + S I FY+W FRGTP+LV Sbjct: 66 FDDRIIEGVLNTLLLTVVSMVIGVVGGILLAVMRLS-KNPVTSSIAWFYIWFFRGTPVLV 124 Query: 73 QLFVIFYGLPHIGIVFD-------------SFVA----IIISLTLNFSAYISEIIRSSII 115 QLFV F ++G+VF+ SF+ ++ L LN +AY++EI R+ ++ Sbjct: 125 QLFVWF----NLGLVFEYINLGPIYKDYWSSFMTPLLTALLGLGLNEAAYMAEICRAGLL 180 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ +GQ +AS+A+G++ +T+R I++PQ + P +E I++LK+TS+ ST+ ++ Sbjct: 181 SVDEGQTEASHALGMSHARTLRRIVIPQAMRVIVPPTGNEVINMLKTTSLVSTVQFVDLL 240 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 ++AQ I ++ + + A YL+LTS + Q +E Sbjct: 241 KSAQDIGQSSGATVELLFLAAAWYLVLTSIFSVGQYYLE 279 >gi|222106917|ref|YP_002547708.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221738096|gb|ACM38992.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 222 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 117/217 (53%), Gaps = 2/217 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +I+D P++ ++ TL I + V+ +++GF +A R + + + + V + R Sbjct: 6 KVILDHLPEI-FSGATTTLWIWVVGMVLGIVVGFLVATGR-RYGGRFLDIPLGLVVEVLR 63 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTP L+Q+F+++YG P++G+ D +I LT+ +AY SEI R+ S+P G +A+ Sbjct: 64 GTPFLIQIFLVYYGGPYVGLSLDPIPCGLIGLTVYSAAYYSEIFRAGYGSVPHGHVEAAE 123 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +GLTR Q IR I+LP+ P + I +LK ++V S IT+PE+ T I S Y Sbjct: 124 CLGLTRLQIIRRILLPEMALIVLPPCVNLAIILLKESAVLSIITVPELTATVSAIGSAQY 183 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 L LA +Y ++ K E+ +++ +S Sbjct: 184 AFLEAIFVLAVIYWVIVEATAWAARKTEARLSRLRFS 220 >gi|238917619|ref|YP_002931136.1| polar amino acid transport system permease protein [Eubacterium eligens ATCC 27750] gi|238872979|gb|ACR72689.1| polar amino acid transport system permease protein [Eubacterium eligens ATCC 27750] Length = 506 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 65/195 (33%), Positives = 114/195 (58%), Gaps = 15/195 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHFYVWIFRGTPLLV 72 L ++ T+ IA + ++ ++IGF IAV+R T I++ I + Y+ + RGTP +V Sbjct: 298 LLKGLLNTVIIAFFAALMGVVIGFLIAVVRSNHDKTGHMKILNFICNIYLTVIRGTPTMV 357 Query: 73 QLFVIFYGLPHIGIVF-----DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 QL +I+Y ++F D + I++ +N AY++EI RS I+SI GQ++A+ + Sbjct: 358 QLLIIYY------VIFSSVHIDKLIVAILAFGINSGAYVAEIFRSGIMSIDNGQFEAARS 411 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL+ K T+ +ILPQ L++EFI +LK TS++ I + ++ + I S TY Sbjct: 412 LGLSYKTTMISVILPQAFKNVLPALANEFIVLLKETSISGYIGLNDLTRGGDIIRSITYD 471 Query: 188 PLIIYCELAFVYLIL 202 P++ +A +YL++ Sbjct: 472 PMLPLIGVAIIYLVM 486 >gi|237802191|ref|ZP_04590652.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025048|gb|EGI05104.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 229 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 125/207 (60%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +II P+L A +TL + I+ + L++ + + R ++ +L + Y++ F Sbjct: 3 WEVIIKWLPRLAQGA-TLTLELVAIAVIAGLVLAIPLGIARASRLWSVRAL-PYAYIFFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+++YGL +V D F +I++TL+ +AYI+EI+R +I + Sbjct: 61 RGTPLLVQLFLVYYGLAQFDVVRQGPLWPYLRDPFWCAVITMTLHTAAYIAEILRGAIQA 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P G+ +A+ A+G+++ + + +I+LP+ S+E I +LK++++AST+T+ E+ Sbjct: 121 VPVGEVEAARALGMSKWKALFYIVLPRATRIGLPAYSNEVILMLKASALASTVTLLELTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I++ TY P+ I+ YL++T Sbjct: 181 MARTIIARTYMPVEIFFAAGMFYLVMT 207 >gi|308186179|ref|YP_003930310.1| glutamine transport system permease protein glnP [Pantoea vagans C9-1] gi|308056689|gb|ADO08861.1| Glutamine transport system permease protein glnP [Pantoea vagans C9-1] Length = 219 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 125/219 (57%), Gaps = 5/219 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W ++I + P LL A +TL I+ I V L IG R + I + I Sbjct: 1 MEFDW-SVIWPAMPALLEGA-KLTLIISIIGLVGGLFIGLVAGFARAY-GGWITNNIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ I RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEIIRGTPIVVQVMFIYFALPMAFPDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIN 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+ ++T+R++I+P + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSSRETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 Q I++ ++ L I+ +A +YL++T + +IE V Sbjct: 178 QEIIAGNFRALEIWSAVAIIYLVITLVLSFVLRRIEKRV 216 >gi|288935884|ref|YP_003439943.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|288890593|gb|ADC58911.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] Length = 243 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 122/214 (57%), Gaps = 10/214 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L AA+ VTL + SF++ ++ + +R+ + S Y+ IFRG+PLL+QLF+ Sbjct: 15 LGAALPVTLGLFICSFILGGVLALGVLALRMSHWP-LASGFAKGYILIFRGSPLLIQLFL 73 Query: 77 IFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 I+YGL G++ SF + +++L L +AY +EI+R +++IP GQ +A A Sbjct: 74 IYYGLGQFGVIRHSFLWPLLREPFICAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQA 133 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++R +R II P + + S+E I ++KST++AS +T+ ++ AQ+I+ TY+ Sbjct: 134 CGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTYR 193 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + ++ A +YL+L + +E +T HT Sbjct: 194 TMEVFLCAAAIYLLLNFIIVQLYALLERRLTPHT 227 >gi|239834625|ref|ZP_04682953.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239822688|gb|EEQ94257.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 223 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 115/201 (57%), Gaps = 2/201 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ ++P LL AI TL I+ IS V+ L +G ++R+ S +ISL Y+ + R T Sbjct: 11 VLAAWPALLNGAIQ-TLKISSISMVLGLALGIVFMLMRMS-SVRVISLTAFGYIELIRNT 68 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P LVQLF IF+G+P +G+ + A I+++TLN +AY +EI+R + SI GQ +A A+ Sbjct: 69 PFLVQLFFIFFGMPSLGVTLSAEQAAILAMTLNCAAYAAEIVRGGVESIKAGQIEAGKAL 128 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL R II I L S+FI ++ ++S+ ++I+ E+ Q I S T++ Sbjct: 129 GLHTFDIYRFIIFRPAIRAVYPALCSQFILMMLNSSLVASISAEELTYVGQMIDSETFRS 188 Query: 189 LIIYCELAFVYLILTSFCYII 209 IY L +YL L+ F I+ Sbjct: 189 FEIYFVLGVIYLALSQFFSIV 209 >gi|261420187|ref|YP_003253869.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. Y412MC61] gi|297529844|ref|YP_003671119.1| polar amino acid ABC transporter inner membrane protein [Geobacillus sp. C56-T3] gi|319766999|ref|YP_004132500.1| polar amino acid ABC transporter inner membrane protein [Geobacillus sp. Y412MC52] gi|261376644|gb|ACX79387.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y412MC61] gi|297253096|gb|ADI26542.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. C56-T3] gi|317111865|gb|ADU94357.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y412MC52] Length = 216 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 74/201 (36%), Positives = 117/201 (58%), Gaps = 2/201 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L +VTL +A IS V+S + G I VIR + ++S ++ V R PLL+ + Sbjct: 13 KFLLQGFLVTLEVAFISIVLSFVFGIIIGVIR-YTKIPVLSQLLAVLVETIRNLPLLLII 71 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F ++ LP +G+ D A I +L + SA +SEI+RS + SI KGQ +A+ + GLT Q Sbjct: 72 FFTYFALPEVGLKLDKLYAAISALVIFESAMLSEIVRSGLQSIDKGQIEAARSSGLTYVQ 131 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI-IYC 193 T+ +IILPQ + P+ S+FIS+LK TS+A I++PE+ AQ I +I I+ Sbjct: 132 TLWYIILPQALRRMVPPIVSQFISLLKDTSLAIVISLPELMNHAQIINGRNVNFVIPIFI 191 Query: 194 ELAFVYLILTSFCYIIQIKIE 214 +AF+Y I+ ++ ++E Sbjct: 192 LVAFMYFIVNYSLSLLSRRLE 212 >gi|314934022|ref|ZP_07841387.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus caprae C87] gi|313654172|gb|EFS17929.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus caprae C87] Length = 485 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 64/185 (34%), Positives = 111/185 (60%), Gaps = 2/185 (1%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I T+ I+ + ++ I+G FIA+++I + S + Y+ RGTP+LVQ+F++F+ Sbjct: 284 GIKNTILISLVGVILGSILGAFIALLKINKFKPL-SWLASIYIEFLRGTPMLVQVFIVFF 342 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G +G+ + + I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL QT++ Sbjct: 343 GTTAALGLDVSALICGTIALIINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYIQTMKS 402 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ P A + Sbjct: 403 VIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLIVAAVL 462 Query: 199 YLILT 203 Y ILT Sbjct: 463 YFILT 467 >gi|312869289|ref|ZP_07729456.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3] gi|311095163|gb|EFQ53440.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3] Length = 502 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 59/171 (34%), Positives = 107/171 (62%), Gaps = 1/171 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + TL I ++ ++ +IG A++R+ + ++ I Y+ RGTP+LVQ+ +++ Sbjct: 303 GVKYTLLITVLAVIVGFLIGVLFALMRLS-DNKLLHGIAICYIEFIRGTPMLVQIMFVYF 361 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G+ I + VA II++ +N AY++EIIRS I S+P GQ +A+ ++G+T++QT R+I Sbjct: 362 GIGAIIQSMPALVAGIIAVAINSGAYVAEIIRSGIQSLPLGQTEAARSLGMTKQQTFRYI 421 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 I+PQ + L +EFI++LK +S+ STI + E+ Q + + TY+ ++ Sbjct: 422 IMPQALKNIWPALGNEFITLLKDSSLVSTIGVTELMYQTQLVQADTYKGVL 472 >gi|160933930|ref|ZP_02081317.1| hypothetical protein CLOLEP_02792 [Clostridium leptum DSM 753] gi|156866603|gb|EDO59975.1| hypothetical protein CLOLEP_02792 [Clostridium leptum DSM 753] Length = 213 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 61/165 (36%), Positives = 99/165 (60%), Gaps = 2/165 (1%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 ++TL I + V +L +G +++ R+ II+ + ++ I RGTPL++QL +FYGL Sbjct: 15 LMTLRIFFSTLVFALPLGLLVSLGRMS-KIKIINWPVRLFILIMRGTPLMLQLLFVFYGL 73 Query: 82 -PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 P GI D +A ++ LN++AY +EI R I SIP GQ++A+ +G +KQT II Sbjct: 74 KPLFGIQLDRVIAAQVAFALNYAAYFAEIYRGGIESIPDGQYEAAKVLGFNKKQTFFRII 133 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 LPQ + P+ +EFI+++K TS+A I + E+ + VS+ Sbjct: 134 LPQVVKRIIPPMGNEFITLVKDTSLAQVIAVVELLKVTNNWVSSA 178 >gi|153011068|ref|YP_001372282.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151562956|gb|ABS16453.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 218 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 118/199 (59%), Gaps = 3/199 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTII-SLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 T+ ++ I+FV I G +A++R+ SD I ++ +F+GTPLL+QLF++F+GL Sbjct: 20 TIALSAIAFVGGGIGGLLVALMRV--SDARAPRYIALGFIRLFQGTPLLMQLFLVFFGLN 77 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 G+ + ++A I+LTL+ SA++ EI R I ++P GQ +A+ A+GL +R++ILP Sbjct: 78 IFGLGINPWIAATIALTLHASAFLGEIWRGCIDAVPPGQREAATALGLRYYNRMRYVILP 137 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q S P + ++K TS+A+ I E+ + Q I + T+ P +++ +A VY +L Sbjct: 138 QAARISVAPTVGFLVQLIKGTSLAAIIGFTELTRQGQIINNATFSPFMVFGTVAAVYFVL 197 Query: 203 TSFCYIIQIKIESSVTQHT 221 I+ ++E+ ++ T Sbjct: 198 CWPLSILARRMETRFSRAT 216 >gi|28872359|ref|NP_794978.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28855614|gb|AAO58673.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 215 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 62/184 (33%), Positives = 110/184 (59%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ ++F+ +IG + V+R T + Y+ +F+GTPLL+QLF++F+G+ Sbjct: 19 TLALSLVAFIGGGLIGLLVMVMRTS-EKTGPRVAAKLYIELFQGTPLLMQLFLVFFGVAL 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ + A ++LTL SAY++EI R + SI KGQW+AS ++ +T + +R++ILPQ Sbjct: 78 MGMDISPWAAAALALTLFTSAYLAEIWRGCVESISKGQWEASASLAMTPLEQMRYVILPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T+V S I E+ +T + + T++P ++Y +A Y IL Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGSMLANATFEPFMVYGFVALGYFIL- 196 Query: 204 SFCY 207 CY Sbjct: 197 --CY 198 >gi|223043619|ref|ZP_03613664.1| glutamine-binding periplasmic protein [Staphylococcus capitis SK14] gi|222443107|gb|EEE49207.1| glutamine-binding periplasmic protein [Staphylococcus capitis SK14] Length = 485 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 64/185 (34%), Positives = 111/185 (60%), Gaps = 2/185 (1%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I T+ I+ + ++ I+G FIA+++I + S + Y+ RGTP+LVQ+F++F+ Sbjct: 284 GIKNTILISLVGVILGSILGAFIALLKINKFKPL-SWLASIYIEFLRGTPMLVQVFIVFF 342 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G +G+ + + I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL QT++ Sbjct: 343 GTTAALGLDVSALICGTIALIINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYIQTMKS 402 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 +I+PQ I L +EF++++K +S+ STI + EI AQ + ++ P A + Sbjct: 403 VIMPQAIKNILPALGNEFVTLIKESSIVSTIGVSEIMFNAQVVQGISFDPFTPLIVAAVL 462 Query: 199 YLILT 203 Y ILT Sbjct: 463 YFILT 467 >gi|17546824|ref|NP_520226.1| amino-acid transmembrane ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17429124|emb|CAD15812.1| probable amino-acid transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 217 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 97/173 (56%), Gaps = 1/173 (0%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 ++F + G + R+ + + + Y+ IF+ TPLL+Q+F++F+G G+ Sbjct: 27 MAFALGGAAGLAVLFARVG-RNAGLQRVSQVYIQIFQNTPLLMQMFLVFFGASMAGLEMS 85 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 + A I LTL SAY++E+ R + +IP+GQW+AS ++ + Q +RH++LPQ + S Sbjct: 86 PWTAAAIGLTLYTSAYLAEVWRGCVEAIPRGQWEASASLAMGYFQQMRHVVLPQAVRMSI 145 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 P + I+K T+VAS I ++ + + + T+QP +IY + YL L Sbjct: 146 APTVGFSVQIVKGTAVASIIGFEDLTKLGSVLANATFQPFLIYGLVGMAYLAL 198 >gi|257866637|ref|ZP_05646290.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257872847|ref|ZP_05652500.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257800595|gb|EEV29623.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257807011|gb|EEV35833.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] Length = 529 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 10/208 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISL 56 F IID + L +TL IA +S +I LIIG + + R F I++ Sbjct: 292 FKKIIDDYGMLFLRGAGLTLFIAILSTIIGLIIGLLVGIFRTLPLSENPVGRFFQRIVNG 351 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 ++ Y+ +FRGTP++VQ VIFYG G+ + +A ++ +++N AY+SEI+R I Sbjct: 352 LLTIYIEVFRGTPMMVQAMVIFYGTALAFGVSMNRTLAAVLIVSINTGAYMSEIVRGGIF 411 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ GQ++A+ AIG++ QT+ ++LPQ + +E I +K T+V S I++ ++F Sbjct: 412 AVDDGQFEAAQAIGMSHWQTMIKVVLPQVMRNILPATGNEIIINIKDTAVLSVISVADLF 471 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 T +Q + + +YL+LT Sbjct: 472 FQGTSAAGTNFQYFQTFAIIGVIYLVLT 499 >gi|254501362|ref|ZP_05113513.1| ABC transporter, permease protein, putative [Labrenzia alexandrii DFL-11] gi|222437433|gb|EEE44112.1| ABC transporter, permease protein, putative [Labrenzia alexandrii DFL-11] Length = 275 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 114/211 (54%), Gaps = 12/211 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +VT+ I +S V+ ++ IA R I S + YV FRGTPLL Q F+++Y Sbjct: 64 GFIVTIQIVSVSLVLGALLSVPIAAGRAS-KLKIFSWPAYAYVNFFRGTPLLAQAFMVYY 122 Query: 80 G-------LPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 G L G+ + D++ +I + +LN +AY +EI+R +I ++PKGQW+ A+G Sbjct: 123 GFGSFSEELKAAGLWWFFRDAWYCVIFTFSLNTAAYQAEILRGAIQNVPKGQWEGGEALG 182 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+R IILPQ + + P +E I ++K +++AS +TI ++ +R S +Y Sbjct: 183 LSRNVIFFKIILPQALMVALRPYGNEIILMIKGSAIASIVTIYDLMGETRRAYSRSYD-F 241 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y A YL++ I KIE+ +T+H Sbjct: 242 QAYIWAAVAYLLIVETLRRIWDKIEARLTRH 272 >gi|58337932|ref|YP_194517.1| amino acid ABC transporter permease protein [Lactobacillus acidophilus NCFM] gi|227902900|ref|ZP_04020705.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus acidophilus ATCC 4796] gi|58255249|gb|AAV43486.1| amino acid ABC transporter permease protein [Lactobacillus acidophilus NCFM] gi|227869316|gb|EEJ76737.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus acidophilus ATCC 4796] Length = 215 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 98/161 (60%), Gaps = 5/161 (3%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +++FYVWI RGTPLL+QL +FYGLP I IVF + A + + LN++AY +EI R S Sbjct: 52 LVNFYVWIMRGTPLLLQLIFVFYGLPIIHIVFPRYQAALFAFVLNYAAYFAEIFRGGFQS 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ++A+ + LTR QT+ II+PQ I + +E I+++K +S+ I + ++ + Sbjct: 112 IDEGQFEAAKVLRLTRFQTMTKIIIPQVIKIVLPSIGNEVINLIKDSSLVYVIGLGDLLR 171 Query: 177 TAQRIVS--TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 ++ T PL++ + +YL+L S C + K+E Sbjct: 172 AGNVAMARDVTLVPLVL---VGIIYLLLISICAFVMKKLEK 209 >gi|307710415|ref|ZP_07646854.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus mitis SK564] gi|307618827|gb|EFN97964.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus mitis SK564] Length = 521 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 56/152 (36%), Positives = 96/152 (63%), Gaps = 1/152 (0%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 +I I++ Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R Sbjct: 338 LIGWILNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVR 397 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I+++ KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ Sbjct: 398 GGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISV 457 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E++ + + + TYQ + +A +Y +LT Sbjct: 458 VELYFSGNTVATQTYQYFQTFTIIAVIYFVLT 489 >gi|299066291|emb|CBJ37475.1| putative amino-acid transmembrane abc transporter protein [Ralstonia solanacearum CMR15] Length = 217 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 97/173 (56%), Gaps = 1/173 (0%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 ++F + G + R+ + + + Y+ IF+ TPLL+Q+F++F+G G+ Sbjct: 27 MAFALGGTAGLVVLFARVG-RNAGLQRVSQAYIQIFQNTPLLMQMFLVFFGASMAGLEMS 85 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 + A I LTL SAY++E+ R + +IP+GQW+AS ++ + Q +RH++LPQ + S Sbjct: 86 PWTAAAIGLTLYTSAYLAEVWRGCVEAIPRGQWEASASLAMGYFQQMRHVVLPQAVRMSI 145 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 P + I+K T+VAS I ++ + + + T+QP +IY + YL L Sbjct: 146 APTVGFSVQIVKGTAVASIIGFEDLTKLGSVLANATFQPFLIYGLVGMAYLAL 198 >gi|302539757|ref|ZP_07292099.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease [Streptomyces hygroscopicus ATCC 53653] gi|302457375|gb|EFL20468.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease [Streptomyces himastatinicus ATCC 53653] Length = 316 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 65/206 (31%), Positives = 113/206 (54%), Gaps = 19/206 (9%) Query: 34 ISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF----------VIFYGLP- 82 + ++ G +AV+R+ ++ ++S + Y+W+FRGTPLLVQL I G+P Sbjct: 87 VGIVGGVVLAVLRMS-ANPVLSRLSWAYIWLFRGTPLLVQLLFWYFLSAIVPTIGLGVPW 145 Query: 83 -------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 ++ A ++ L L+ +AY++EI+R+ I S+ GQ +A+ A+G++R QT Sbjct: 146 GPTFVEAETNVLITQLTAAVLGLGLHEAAYMAEIVRAGITSVDDGQSEAAQALGMSRGQT 205 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R I+LPQ + P ++ IS+LK+TS+ I +PE+ + Q I S +Q + + Sbjct: 206 LRRIVLPQALRIIIPPTGNQAISMLKTTSLVFAIAVPELLTSIQGIYSRNFQQVPLLVVA 265 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHT 221 F YL+ TS + Q +E + T Sbjct: 266 CFWYLVATSVLNVGQYYLERRFGRGT 291 >gi|145223751|ref|YP_001134429.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium gilvum PYR-GCK] gi|315444078|ref|YP_004076957.1| amino acid ABC transporter membrane protein, PAAT family ;amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] gi|145216237|gb|ABP45641.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium gilvum PYR-GCK] gi|315262381|gb|ADT99122.1| amino acid ABC transporter membrane protein, PAAT family ;amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] Length = 493 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 71/199 (35%), Positives = 119/199 (59%), Gaps = 5/199 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMHFYVWI 64 F LI + P LL A + +T+ + +S +LI+G + R+ S +I + I +V I Sbjct: 281 FGLIKSTSPMLL-AGLKMTIILTVVSIFFALILGVIFGLARV--SRSIWLRAIGTTFVDI 337 Query: 65 FRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTPLLVQ F I++G+P +G + A II+L+LN AY++EI+R I+S+ KGQ + Sbjct: 338 FRGTPLLVQAFFIYFGIPATMGFQMSAVTAGIITLSLNAGAYMTEIVRGGILSVDKGQME 397 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++G+ T+R +ILPQ I T ++F+ LK TS+ S + I E+ Q+ + I++ Sbjct: 398 AARSLGIGYLPTMRKVILPQAIRTMIPSYINQFVITLKDTSILSVLGIAELTQSGRIIIA 457 Query: 184 TTYQPLIIYCELAFVYLIL 202 Y+ ++ + +Y I+ Sbjct: 458 GNYKAFEMWLIVGVIYFIV 476 >gi|306833383|ref|ZP_07466510.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] gi|304424153|gb|EFM27292.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] Length = 213 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 118/211 (55%), Gaps = 9/211 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRG 67 I+ P LL A VTL + CI V+S+ G +A +++I F + ++ YVWI RG Sbjct: 4 ILQVLPSLLDGA-KVTLQVFCIVIVLSIPFGAILAFLMQIKFKP--LQWLLTLYVWIMRG 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL +Y LP +GIV D A I++ TLN++AY +EI R I +IPKGQ++A+ Sbjct: 61 TPLLLQLIFFYYVLPSVGIVMDRLPAAILAFTLNYAAYFAEIFRGGIAAIPKGQYEAAKV 120 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TT 185 + L + QTI +IILPQ + +E I+++K +S+ + + ++ ++ + T Sbjct: 121 LKLNQLQTIHYIILPQVFKIVLPSVFNEIINLVKDSSLVYVLGVGDLLLASKTAANRDAT 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 P+ + +YL++ +I + E Sbjct: 181 LAPMFVAGA---IYLLMIGVVTLISKQTEKK 208 >gi|304395813|ref|ZP_07377696.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304357107|gb|EFM21471.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 219 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 125/220 (56%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W ++I + P LL A +TL I+ I V L IG R + I + I Sbjct: 1 MEFDW-SVIWPAMPALLEGA-KLTLIISVIGLVGGLFIGLIAGFARAY-GGWITNNIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ I RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEIIRGTPIVVQVMFIYFALPMAFPDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIN 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+ ++T+R++I+P + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSSRETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A +YL++T + +IE V Sbjct: 178 QEIIAGNFRALEIWSAVAIIYLVITLVLSFVLRRIEKRVK 217 >gi|295704150|ref|YP_003597225.1| sulfur-containing amino acid ABC transporter permease TcyL [Bacillus megaterium DSM 319] gi|294801809|gb|ADF38875.1| sulfur-containing amino acid ABC transporter, permease protein TcyL [Bacillus megaterium DSM 319] Length = 232 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 77/225 (34%), Positives = 124/225 (55%), Gaps = 9/225 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 LI S PQLL + + +T+ I S VI +G FIA+ RI+ ++S I Y+ R Sbjct: 8 ELIFTSIPQLL-SYLHITIWILIASLVIGSTLGLFIALPRIY-KVPVLSQIAAVYISFMR 65 Query: 67 GTPLLVQLFVIFYGLP------HIGIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 GTP+L+QLF++FYG+P HI + V +II+ +L+ +A SE++R +I S+ K Sbjct: 66 GTPILIQLFLVFYGIPALLQLIHIDVSRMAPLVFVIITYSLSTAASFSEMMRGAINSVDK 125 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+Y+IG++ KQT I+LPQ + + I LK TS+A TI + ++ Sbjct: 126 GQTEAAYSIGMSGKQTFTRIVLPQAFVVAFPNFGNLVIGSLKDTSLAFTIGVMDMMGRGD 185 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 I++ T + +Y LA +Y ++ +K E + +H V Sbjct: 186 TIIAATAHAVEVYIALAIIYYLVAIILEKFFVKSEQKLQKHDQPV 230 >gi|260597203|ref|YP_003209774.1| glutamine ABC transporter permease [Cronobacter turicensis z3032] gi|260216380|emb|CBA29430.1| Glutamine transport system permease protein glnP [Cronobacter turicensis z3032] Length = 219 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 122/211 (57%), Gaps = 5/211 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W ++I + P LL A +TL I+ + ++IG + R + I + I Sbjct: 1 MEFDW-SVIWPAIPILLDGA-KMTLWISILGLAGGIVIGLLAGLAR-SYGGWIANHIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ I RGTP++VQ+ I++ LP I D+F A +I++ +N AYI+EI R S++SI Sbjct: 58 FIEIIRGTPIVVQVMYIYFALPMAFPDIRIDTFTAAVITIMINSGAYIAEITRGSVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R++TIRH+I+P + L ++ I +K TS+ I E+ ++ Sbjct: 118 KGFSEAGLALGLSRRETIRHVIMPLALRRMLPALGNQLIISIKDTSLFIVIGAAELTRSG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYII 209 Q I++ ++ L I+ + +YLI+T I+ Sbjct: 178 QEIIAGNFRALEIWTAVGVIYLIITQVLNIV 208 >gi|171316138|ref|ZP_02905363.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171098742|gb|EDT43536.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 216 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 55/158 (34%), Positives = 93/158 (58%), Gaps = 3/158 (1%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEI 109 + ++ Y+ +F+GTPLL+QLFV+F+GLP IG+ +VA LT SAY++EI Sbjct: 45 NSRVLRGCAKLYIEVFQGTPLLMQLFVVFFGLPLIGLDVSPWVAATAGLTFFTSAYLAEI 104 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R + ++PKGQW+AS ++ ++ + +RH+ILPQ + P + +K T++ S I Sbjct: 105 WRGCVEAVPKGQWEASASLAMSYVEQLRHVILPQAARIAIAPTVGFGVQAVKDTALVSII 164 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 E+ + I + T++P ++Y +A +Y L CY Sbjct: 165 GFTELTKVGVAISNATFRPFVVYGLVALIYFAL---CY 199 >gi|187478360|ref|YP_786384.1| ABC transporter permease [Bordetella avium 197N] gi|115422946|emb|CAJ49475.1| ABC transporter, permease protein [Bordetella avium 197N] Length = 217 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 55/154 (35%), Positives = 98/154 (63%), Gaps = 4/154 (2%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPH---IGIVFDSFVAIIISLTLNFSAYISEI 109 ++S +++ Y+W+ RGTPL++QL I++ LP IG+ F A I++ LN++AY +EI Sbjct: 46 LLSRLVNAYIWLMRGTPLMLQLLFIYFALPFVPVIGVRLPDFPAAIVAFALNYAAYFAEI 105 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R+ I+S+ +GQ++ S +G++ QT+R I+LPQ + P+S+E I+++K TS+ + Sbjct: 106 FRAGILSVDRGQYEGSKVLGMSYLQTMRRIVLPQMVQRVLPPMSNETITLVKDTSLIYVL 165 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + +I +TA+ IV + AF YL++T Sbjct: 166 ALNDILRTARGIVQRDFTTTPFLVAAAF-YLLMT 198 >gi|323126570|gb|ADX23867.1| putative glutamine-binding periplasmic protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 522 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 105/191 (54%), Gaps = 10/191 (5%) Query: 23 VTLPIACISFVISLIIGFFIAVIRI---------FFSDTIISLIMHFYVWIFRGTPLLVQ 73 +TL I+ + + L IG I + R + ++ Y+ IFRGTP++VQ Sbjct: 298 MTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAVLGQKLFGWLLTIYIEIFRGTPMIVQ 357 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 VI+YG GI D +A I +++N AY+SEI+R I ++ KGQ++A+ A+G T Sbjct: 358 SMVIYYGTAQAFGISIDRTLAAIFIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTH 417 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+R I+LPQ + +EF+ +K TSV + I++ E++ + + + TYQ + Sbjct: 418 GQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTF 477 Query: 193 CELAFVYLILT 203 +A +Y +LT Sbjct: 478 TIIAIIYFVLT 488 >gi|303246939|ref|ZP_07333215.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] gi|302491646|gb|EFL51529.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] Length = 292 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 121/227 (53%), Gaps = 14/227 (6%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F L + T+ I S ++ + +G A++R+ + + + +Y+W+FRG P+ + Sbjct: 48 FSTALLKGLANTILITACSMLMGMALGVIFAIMRLS-QNPVSRMFSGWYIWLFRGAPVYL 106 Query: 73 QLFVIF-----YGLPHIGI-------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 QL + F + + ++G V F+A ++ L LN AY++EI+R I+S+ KG Sbjct: 107 QLLIWFNLALIFPVVNLGFAQYRMVDVMTPFMAALLGLGLNEGAYLTEIVRGGILSVDKG 166 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q DA+ ++G+TR +R I+LPQ + P+ +EFI +LK++S+AS I E+ AQ Sbjct: 167 QIDAATSLGMTRLMAMRRIVLPQAMRVIVPPIGNEFIGLLKTSSMASAIAYTELLHKAQI 226 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ-HTYSVDK 226 I + + + YLI+ + ++Q+ IE + H ++ + Sbjct: 227 IYFVNAKVMELLIVATGWYLIVVTILSVVQVGIERRFARGHAFATQR 273 >gi|21909739|ref|NP_664007.1| putative glutamine-binding periplasmic protein [Streptococcus pyogenes MGAS315] gi|28895121|ref|NP_801471.1| glutamine-binding periplasmic protein [Streptococcus pyogenes SSI-1] gi|21903923|gb|AAM78810.1| putative glutamine-binding periplasmic protein [Streptococcus pyogenes MGAS315] gi|28810366|dbj|BAC63304.1| putative glutamine-binding periplasmic protein [Streptococcus pyogenes SSI-1] Length = 522 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 105/191 (54%), Gaps = 10/191 (5%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISLIMHFYVWIFRGTPLLVQ 73 +TL I+ + + L IG I + R + ++ Y+ IFRGTP++VQ Sbjct: 298 MTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEIFRGTPMIVQ 357 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 VI+YG GI D +A I +++N AY+SEI+R I ++ KGQ++A+ A+G T Sbjct: 358 SMVIYYGTAQAFGISIDRTLAAIFIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTH 417 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+R I+LPQ + +EF+ +K TSV + I++ E++ + + + TYQ + Sbjct: 418 GQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTF 477 Query: 193 CELAFVYLILT 203 +A +Y +LT Sbjct: 478 TIIAIIYFVLT 488 >gi|253575106|ref|ZP_04852445.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251845562|gb|EES73571.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 261 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 122/205 (59%), Gaps = 9/205 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ +I +F +L ++ + VTL I S + +I+GF IA R++ ++ YV F Sbjct: 7 FSFVISAFSKL-WSTLGVTLLIVGGSLLTGMIVGFVIAFPRLY-RIPVLQQFSKVYVSFF 64 Query: 66 RGTPLLVQLFVIFYGLP------HIGIVFDSFVA-IIISLTLNFSAYISEIIRSSIISIP 118 RGTP+L+QLF+ +YGLP H+ I + +I++ L+ A++SE+IR+S+ ++ Sbjct: 65 RGTPILIQLFLFYYGLPELLKLVHLDISRAPVLFFVILTYGLHTGAFMSEMIRASVTAVD 124 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+YAIG+ Q I+LPQ + + S+ I++LK TS+A T+ + E+ A Sbjct: 125 RGQVEAAYAIGMKGHQAFTRIVLPQALAVAVPVFSNMVIALLKDTSLAFTLGVMELTGKA 184 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT 203 Q + + T + Y LAF+YL+++ Sbjct: 185 QTLGALTQHFIEAYLALAFIYLVVS 209 >gi|157691141|ref|YP_001485603.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032] gi|194015977|ref|ZP_03054592.1| L-cystine transport system permease protein TcyL [Bacillus pumilus ATCC 7061] gi|157679899|gb|ABV61043.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus SAFR-032] gi|194012332|gb|EDW21899.1| L-cystine transport system permease protein TcyL [Bacillus pumilus ATCC 7061] Length = 224 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 124/224 (55%), Gaps = 12/224 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF- 60 K +W ++ FP L+ + +T+ +A +S V ++IIG A+I + I ++ F Sbjct: 3 KIDW-QYMVTVFPTLI-QYLPITIFMAIVSMVFAIIIGVVFALI----TKNRIPVLYQFA 56 Query: 61 --YVWIFRGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 Y+ FR P LVQLF+I++GLP + D+ A+II L++ SAY++EI R+++ Sbjct: 57 KLYISFFRAVPTLVQLFLIYFGLPQLFPAMTSMDALTAVIIGLSIKNSAYLAEIFRAALN 116 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ +GQ +A ++G+TR Q+ II PQ I + + FI +LK TS+A TI + E+F Sbjct: 117 SVDEGQLEACLSVGMTRWQSYVRIIFPQAIRNAIPATGNTFIGLLKETSLAFTIGVAEMF 176 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + I S Y+ Y + VY ++T +Q E +++ Sbjct: 177 AQGKMIASANYKYFETYLAVGIVYWVMTIIYSFLQDLFERKISK 220 >gi|312897773|ref|ZP_07757189.1| ABC transporter, permease protein [Megasphaera micronuciformis F0359] gi|310621157|gb|EFQ04701.1| ABC transporter, permease protein [Megasphaera micronuciformis F0359] Length = 216 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 57/167 (34%), Positives = 103/167 (61%), Gaps = 3/167 (1%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL I I+ V+SL +G +A+ R+ ++ ++ Y+++ RGTPL++Q+ I+YGLP Sbjct: 17 VTLKIFVITIVLSLPLGIIMAMARLS-PLAVLRKLLEGYIYLMRGTPLMLQILFIYYGLP 75 Query: 83 HI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 + G+ + A II+ LN++AY +EI R I SI +GQ++ + +G+T QT+R I+ Sbjct: 76 FLIPGLRLADYPAAIIAFVLNYAAYFAEIFRGGIQSIDRGQYEGAKVLGMTYAQTMRRIV 135 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 LPQ + P+++E I++LK TS+ + + ++ + + IV + Sbjct: 136 LPQVLKRVLPPVANETINLLKDTSLVYILAMNDVLRITRSIVQRDFD 182 >gi|226228607|ref|YP_002762713.1| putative amino acid ABC transporter permease/substrate binding protein [Gemmatimonas aurantiaca T-27] gi|226091798|dbj|BAH40243.1| putative amino acid ABC transporter permease/substrate binding protein [Gemmatimonas aurantiaca T-27] Length = 519 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 64/167 (38%), Positives = 109/167 (65%), Gaps = 4/167 (2%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL AA V+TL I+ + ++++ G IA R++ ++ + YV + RGTP+L+ Sbjct: 316 LPALLRAA-VITLGISLAAMALAMVAGGAIATGRVY-GGPVLRAALSIYVEVVRGTPVLL 373 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLFV++YGL + I + VA I+ L LN++AY SEI RS++++IP+ Q +A+ +GLT Sbjct: 374 QLFVLYYGLSGV-IRLPALVAAILGLGLNYAAYESEIYRSALMAIPRAQLEAARTLGLTE 432 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTA 178 Q +R + PQ + + P++++F+++LK +S+ S IT+ E+ QTA Sbjct: 433 WQVLRLVRGPQALRLALAPMTNDFVALLKDSSLVSVITVVELTKQTA 479 >gi|167840667|ref|ZP_02467351.1| ABC transporter, inner-membrane component [Burkholderia thailandensis MSMB43] Length = 220 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 109/193 (56%), Gaps = 2/193 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 PQLL A+ TL ++ ++ +G F+ + + S ++ YV + RGTP+L Sbjct: 14 LPQLLDGALT-TLWLSAVAVGCGFFVGVFVHTMSVSHSR-LLRGAARVYVSVLRGTPVLA 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QL V +Y +GI FVA I L+LN AY S+I+ + +I GQ +A+ LTR Sbjct: 72 QLLVFYYVPSALGIELPGFVAAAIGLSLNTGAYQSQILGAGFRAIAPGQIEAALTFNLTR 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +Q + HI +PQ + + L SE I I+K+++V S I++ ++ + Q++ S++Y+PL +Y Sbjct: 132 RQVLWHIEVPQVMRATLPALVSEMIDIVKASAVVSVISVTDLMRVGQQLSSSSYRPLEVY 191 Query: 193 CELAFVYLILTSF 205 A YL +TS Sbjct: 192 SLAAVFYLAITSL 204 >gi|119873304|ref|YP_931311.1| polar amino acid ABC transporter, inner membrane subunit [Pyrobaculum islandicum DSM 4184] gi|119674712|gb|ABL88968.1| polar amino acid ABC transporter, inner membrane subunit [Pyrobaculum islandicum DSM 4184] Length = 229 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 121/212 (57%), Gaps = 12/212 (5%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + TL +A +SFVI L++G + +IR FF + + YV FRGTPLLVQ+F+I+ Sbjct: 15 GGVPTTLSLALLSFVIGLVLGSILLLIR-FFLPKPLPWLASAYVEAFRGTPLLVQIFIIY 73 Query: 79 YG----LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +G L GI D F A +I+L LN +AY +EI RS++ +IP Q+ + A T+ Q Sbjct: 74 FGVGGYLKDYGINIDPFTAGVIALGLNSAAYQAEIFRSAVQAIPLEQYLTAEAYAFTKTQ 133 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTI--TIPEIFQTAQRIVSTTYQPLIIY 192 T R+IILPQ + + L +E + ++K +S+ + I T P+IF+ A ++ + Y Sbjct: 134 TFRYIILPQALRIAIPALMNELVLLIKDSSLVAVIGVTPPDIFRRADYYAASKFAYFEAY 193 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 A +Y I+ CY + +KI S + Y++ Sbjct: 194 LAAATIYFII---CYTM-VKI-SHYIERKYAI 220 >gi|89896132|ref|YP_519619.1| hypothetical protein DSY3386 [Desulfitobacterium hafniense Y51] gi|89335580|dbj|BAE85175.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 224 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 58/169 (34%), Positives = 106/169 (62%), Gaps = 6/169 (3%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + ++ V+S+ +G +++ RI + S I Y+W+FRGTPL++QL +++GLP Sbjct: 22 VTLKMFFVTIVMSVPLGLMLSLGRISRFGVLRSAI-GVYIWVFRGTPLMLQLLFVYFGLP 80 Query: 83 HIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 I ++ + F A I++ LN++AY +EI R+ I SI +GQ++ + A+G+T Q +R Sbjct: 81 FIPVIGEILILTDFQAAILAFVLNYAAYFAEIFRAGIQSIERGQYEGARALGMTYGQLMR 140 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 IILPQ + P+S+E I+++K TS+ + + ++ +T + +V + Sbjct: 141 RIILPQVVKRVLPPVSNETITLVKDTSLIYVLAMNDLLRTTRALVQRDF 189 >gi|317498348|ref|ZP_07956645.1| binding-protein-dependent transport system inner membrane component [Lachnospiraceae bacterium 5_1_63FAA] gi|316894370|gb|EFV16555.1| binding-protein-dependent transport system inner membrane component [Lachnospiraceae bacterium 5_1_63FAA] Length = 218 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 117/212 (55%), Gaps = 15/212 (7%) Query: 11 DSFPQ----LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 SFP+ L+ + TL + ++ + LI+G IA R+ II + + F++ I R Sbjct: 5 QSFPEIVKLLIENGLQSTLILFFLTLIFGLILGMIIAKGRMS-KLLIIQMPIRFFLLIMR 63 Query: 67 GTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 GTPL++QL+ ++GL +I G+ D A II +LN++AY +EI RS I +IPKGQ++A+ Sbjct: 64 GTPLILQLYGFYFGLYYIAGLSLDRMTAAIIGFSLNYAAYFAEIYRSGIQAIPKGQYEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +G R QT IILPQ + L SE ++++K TS+A I + EI+ A ++ + Sbjct: 124 KVLGFNRSQTFFKIILPQVVKIITPSLGSECMTLVKDTSLAHVIGVMEIYVVATNQMARS 183 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +YL++ Y+I I S V Sbjct: 184 R---------GMIYLVVAGIFYLIMNAIVSKV 206 >gi|260461491|ref|ZP_05809738.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259032561|gb|EEW33825.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 221 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 125/209 (59%), Gaps = 4/209 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FNLI F +L + ++++L +A IS I ++IG +AV + + ++ ++ YV Sbjct: 7 FNLIWRHFDKL-WGGLLLSLELAVISIAIGVVIGLVLAVWYVS-AGRVVRAVIAAYVEFI 64 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 R PL++ ++++FYGLP + + + + + +++L++ AY+ E+ RS + ++P+GQ DA Sbjct: 65 RNVPLILLVYLVFYGLPTVVDLAYSAPTSFVLTLSVYSGAYLVEVFRSGLEAVPRGQLDA 124 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 AIGLT Q + H+ LP + + LS+ FIS+ K TS+AS I++PE+ AQ I Sbjct: 125 GKAIGLTPWQRLLHVRLPTMLRITLPALSNTFISLFKDTSIASVISVPELTYGAQWINFN 184 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKI 213 T++ + +Y +YL+ T + + +++ Sbjct: 185 TFRIVEVYLVTTAMYLV-TGYALLFALRL 212 >gi|169828294|ref|YP_001698452.1| glutamine transport system permease [Lysinibacillus sphaericus C3-41] gi|168992782|gb|ACA40322.1| Glutamine transport system permease protein [Lysinibacillus sphaericus C3-41] Length = 241 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 112/212 (52%), Gaps = 14/212 (6%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI---------FFSD 51 M EW II++ Q+ TL I+ IS +I IGFFI ++ F+S Sbjct: 1 MSLEWILSIIENNWQMFLRGAYYTLLISTISTIIGAFIGFFIGIMHTIPVRKKGVKFYSL 60 Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEII 110 +I+ I+ YV FRGTP++VQ V++YGL GI A I+ ++LN AY++EI+ Sbjct: 61 KLINFILTCYVEFFRGTPMIVQAMVVYYGLDIAFGIDMHFITAGILVVSLNTGAYMAEIV 120 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R I+SI GQ++A+ AIG+ Q + H++LPQ ++ I +K T+V + I Sbjct: 121 RGGIVSIDNGQYEAASAIGMNHFQIMLHVVLPQVARNVLPATGNQLIMNIKDTAVLNVIG 180 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + E+F + I ++ Y E FV IL Sbjct: 181 VTELFFQTKSISGNNFR----YFESFFVACIL 208 >gi|187927129|ref|YP_001897616.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12J] gi|309780168|ref|ZP_07674919.1| amino acid ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|187724019|gb|ACD25184.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12J] gi|308920871|gb|EFP66517.1| amino acid ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 217 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 103/183 (56%), Gaps = 1/183 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++ TL ++ ++F + G + R+ + T+ + Y+ +F+ TPLL+Q+F++F+ Sbjct: 17 GLLATLMLSLMAFALGGTAGLVVLFARVGRNATL-QRVSKAYIQLFQNTPLLMQMFIVFF 75 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G G + A I LTL SAY++E+ R + +IP+GQW+AS ++ + Q +RH+ Sbjct: 76 GASMAGFEMSPWTAAAIGLTLYTSAYLAEVWRGCVEAIPRGQWEASSSLAMGYFQQMRHV 135 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + S P + I+K T+VAS I ++ + + + T+QP +IY +A Y Sbjct: 136 VLPQAVRLSIAPTVGFSVQIVKGTAVASIIGFEDLSKLGSVLANATFQPFLIYGLVAIGY 195 Query: 200 LIL 202 L Sbjct: 196 FAL 198 >gi|253689072|ref|YP_003018262.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755650|gb|ACT13726.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 225 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 113/219 (51%), Gaps = 2/219 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y+W I + QLL + T+ I S +I ++ G +A +++ ++ L Sbjct: 1 MSYQWDFSAIWPYHQLLLEGLWGTIKIGATSILIGMVAGMVLAAMKMS-PRQLLRLPAAM 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 + +R TP LV F I+Y LP I + F F A +I+L+ A+ +E+ R +I SI Sbjct: 60 LIGFYRNTPALVHFFWIYYALPVITPLTFSPFTAAVIALSAQSGAFYAEVYRGAISSIHA 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+ + A+G+ + +R +ILPQ + P ++KSTS+AS++ E+ A Sbjct: 120 GQWEGAKALGMPKSTALRRVILPQALRRMIPPFIERSFELIKSTSLASSLAYSELLYQAM 179 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 +I S TY+PL +Y +A +Y L + IE ++ Sbjct: 180 QINSQTYRPLEVYSLVAVMYFTLLLLISLFSQHIEKRLS 218 >gi|222109927|ref|YP_002552191.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax ebreus TPSY] gi|221729371|gb|ACM32191.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax ebreus TPSY] Length = 217 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 63/187 (33%), Positives = 117/187 (62%), Gaps = 11/187 (5%) Query: 23 VTLPIACISFVISLIIGFFIAVIRI-FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 VTL + I+ V+++ +G +A+ R+ F+ +S ++ Y+W+ RGTPL++Q+ I++ L Sbjct: 17 VTLKLFAITLVLAVPLGLVLALARVSRFAP--LSAAVNGYIWLMRGTPLMLQMLFIYFAL 74 Query: 82 PH---IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 P IG+ F A + + LN++AY +EI R+ I S+ +GQ++A+ +G++ QT+R Sbjct: 75 PFVPVIGVRLPDFPAAVAAFALNYAAYFAEIFRAGIQSVDRGQYEAAKVLGMSYGQTMRR 134 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST--TYQPLIIYCELA 196 I+LPQ + + P+S+E I+++K TS+ + + ++ + A+ IV T P I+ A Sbjct: 135 IVLPQMVRSILPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDFTTTPFIVAA--A 192 Query: 197 FVYLILT 203 F YL++T Sbjct: 193 F-YLVMT 198 >gi|199597667|ref|ZP_03211095.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus rhamnosus HN001] gi|229551247|ref|ZP_04439972.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|258509811|ref|YP_003172562.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG] gi|199591474|gb|EDY99552.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus rhamnosus HN001] gi|229315410|gb|EEN81383.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|257149738|emb|CAR88711.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus GG] gi|259651074|dbj|BAI43236.1| amino acid ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 482 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 59/180 (32%), Positives = 108/180 (60%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL A ++ + IIG +A++++ + + ++ + Y+ RGTPLLVQ F++F+G Sbjct: 289 TLVFAVLTVLFGTIIGTLLALMKLS-RNWLAKVVANIYIEFIRGTPLLVQAFIVFFGTQI 347 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ +FVA I++ +N AY++EIIR I S+P GQ +A+ ++GL + Q +R++ILPQ Sbjct: 348 LGLDLSAFVAGAIAMAINSGAYVAEIIRGGINSVPVGQTEAARSLGLHQSQAMRYVILPQ 407 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + L +EF++ +K +SV S I E+ + +++P + +A +Y I+T Sbjct: 408 AMKNIWPALGNEFVTDIKESSVLSVIGATELMFEGTVVQGASFKPFLPLVVVAILYFIMT 467 >gi|299537135|ref|ZP_07050438.1| glutamine transport system permease protein [Lysinibacillus fusiformis ZC1] gi|298727376|gb|EFI67948.1| glutamine transport system permease protein [Lysinibacillus fusiformis ZC1] Length = 241 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 111/211 (52%), Gaps = 13/211 (6%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI---------FFSD 51 M EW II++ Q+ TL I+ IS +I IGFFI ++ F+S Sbjct: 1 MSLEWILSIIENNWQMFLRGAYYTLLISSISTIIGAFIGFFIGIMHTIPVRKKGVKFYSL 60 Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEII 110 +I+ I+ YV FRGTP++VQ V++YGL GI A I+ ++LN AY++EI+ Sbjct: 61 KLINFILTCYVEFFRGTPMIVQAMVVYYGLDIAFGIDMHFITAGILVVSLNTGAYMAEIV 120 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R I+SI GQ++A+ AIG+ Q + H++LPQ ++ I +K T+V + I Sbjct: 121 RGGIVSIDNGQYEAASAIGMNHFQIMLHVVLPQVARNVLPATGNQLIMNIKDTAVLNVIG 180 Query: 171 IPEIFQTAQRIVSTT---YQPLIIYCELAFV 198 + E+F + I ++ + C L F+ Sbjct: 181 VTELFFQTKSISGNNFRYFESFFVACVLYFI 211 >gi|19745409|ref|NP_606545.1| glutamine-binding periplasmic protein [Streptococcus pyogenes MGAS8232] gi|19747518|gb|AAL97044.1| putative glutamine-binding periplasmic protein [Streptococcus pyogenes MGAS8232] Length = 522 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 105/191 (54%), Gaps = 10/191 (5%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISLIMHFYVWIFRGTPLLVQ 73 +TL I+ + + L IG I + R + ++ Y+ IFRGTP++VQ Sbjct: 298 MTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEIFRGTPMIVQ 357 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 VI+YG GI D +A I +++N AY+SEI+R I ++ KGQ++A+ A+G T Sbjct: 358 SMVIYYGTAQAFGISIDRTLAAIFIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTH 417 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+R I+LPQ + +EF+ +K TSV + I++ E++ + + + TYQ + Sbjct: 418 GQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTF 477 Query: 193 CELAFVYLILT 203 +A +Y +LT Sbjct: 478 TIIAIIYFVLT 488 >gi|15902453|ref|NP_358003.1| ABC transporter substrate binding protein - glutamine transport [Streptococcus pneumoniae R6] gi|15457972|gb|AAK99213.1| ABC transporter substrate binding protein - glutamine transport [Streptococcus pneumoniae R6] Length = 311 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 103/172 (59%), Gaps = 1/172 (0%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ +++ Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R Sbjct: 128 LVGWVLNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVR 187 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I+++ KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ Sbjct: 188 GGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISV 247 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 E++ + + + TYQ + +A +Y +LT I IE + TY+ Sbjct: 248 VELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRMDMDTYT 299 >gi|51892199|ref|YP_074890.1| glutamine ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] gi|51855888|dbj|BAD40046.1| glutamine ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] Length = 218 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 117/201 (58%), Gaps = 1/201 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ + VTL + +S + ++G A+ RI + + ++ YV +FRGTPLL+QL Sbjct: 15 LFEGLGVTLKLTALSALFGTLLGLLAALARIS-RNPLFTVPATLYVNLFRGTPLLLQLLF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 I+ LP +G++ F A ++ +LN AYI+EIIR++I SI +GQ +A+ ++G++ + Sbjct: 74 IYNALPQLGLLIQPFPAAVLGYSLNSGAYIAEIIRAAIQSIDRGQMEAARSLGMSYGLAM 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 R IILPQT P+ +E ++ K TS+ASTI+I E+ + + + VS T Y A Sbjct: 134 RRIILPQTYRRLLPPMVNELSALTKDTSLASTISILELMKYSSQFVSRTNLAWQTYVWTA 193 Query: 197 FVYLILTSFCYIIQIKIESSV 217 YL++T + ++E + Sbjct: 194 AFYLVVTMTLSALASRLEKKL 214 >gi|49475423|ref|YP_033464.1| ABC transporter, permease protein [Bartonella henselae str. Houston-1] gi|49238229|emb|CAF27439.1| ABC transporter, permease protein [Bartonella henselae str. Houston-1] Length = 235 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 119/211 (56%), Gaps = 12/211 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +VT + I+ + +G FI +R+ ++ ++ H YV+ FRG+PLL QLF+ +Y Sbjct: 25 GFLVTFELVFIACSLGFFLGMFITFVRLS-NNKLLRYFAHAYVYFFRGSPLLAQLFLFYY 83 Query: 80 GLP-------HIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 GL +G+ + +++ I LN +AY SEI + S +S+ GQ +AS A+G Sbjct: 84 GLGSMNSFWQQVGLWWFFQNAWYCCIFIFALNSAAYQSEIFKGSFLSVKAGQIEASKALG 143 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+ T IILPQ + + PL +EFI ++KS+++AS ITI ++ A+ S T+ Sbjct: 144 LSSSTTFFKIILPQAMVVALRPLGNEFILMIKSSAIASLITIYDLMGIAKLTYSRTFD-F 202 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +Y +A +YL++ + + I IE +T++ Sbjct: 203 QVYIWVALIYLLVVALVHRFIIAIERHLTRY 233 >gi|88800374|ref|ZP_01115940.1| amino acid ABC transporter, permease protein [Reinekea sp. MED297] gi|88776951|gb|EAR08160.1| amino acid ABC transporter, permease protein [Reinekea sp. MED297] Length = 218 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 109/200 (54%), Gaps = 8/200 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD---TIISLIMHFYV 62 FNL++D P LL AA V T+ ++ S L GFF+A +F + + YV Sbjct: 3 FNLMVDVTPLLLKAAWV-TIDVSARS----LFFGFFVACGLVFMQSLRFAPVRWLARGYV 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTP VQL ++FYG P IG D + N AY+SE IR SI S+ GQ Sbjct: 58 SAIRGTPYFVQLLLVFYGGPSIGFRLDPLTCGVFVGAFNIGAYMSEAIRGSIESVDSGQA 117 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G + QT+ I+LPQ L I ++K++S+ S I++ E+ AQR++ Sbjct: 118 EASRSLGFGKAQTLISIVLPQAAPLMIRSLGVLAIVVVKNSSLISIISVVELTYQAQRLI 177 Query: 183 STTYQPLIIYCELAFVYLIL 202 +TY+PL I+ A +Y+++ Sbjct: 178 GSTYKPLEIFTISALMYIVI 197 >gi|309781434|ref|ZP_07676170.1| glutamine ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|308919847|gb|EFP65508.1| glutamine ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 222 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 71/196 (36%), Positives = 124/196 (63%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 +VT+ + + V+ ++G I + R+ I I YV RGTPLLVQLF++F+GL Sbjct: 20 LVTVEVTAAALVLGCMLGLLIGIGRLNPRRRFIYGICTVYVTFIRGTPLLVQLFLLFFGL 79 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 P I+ +FV ++ L + AY+SEI+R +I S+ +GQ +A+ +IG++ Q++R IIL Sbjct: 80 PQFDILLPAFVCGVLGLGVYSGAYVSEIVRGAIQSVDRGQMEAARSIGMSSAQSMRAIIL 139 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ + PL +EFI+++K++++ S +TI ++ Q+I+S +Y+ L +Y +A VYL+ Sbjct: 140 PQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLEVYLAIALVYLV 199 Query: 202 LTSFCYIIQIKIESSV 217 LTS + ++E ++ Sbjct: 200 LTSAASYLLHRLERNI 215 >gi|59713575|ref|YP_206350.1| amino acid ABC transporter permease protein [Vibrio fischeri ES114] gi|59481823|gb|AAW87462.1| amino acid ABC transporter permease protein [Vibrio fischeri ES114] Length = 264 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 65/193 (33%), Positives = 122/193 (63%), Gaps = 6/193 (3%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS-LIMHFYVWIFRGTPLL 71 FP L ++VTL I+ IS + +L I A++R+ S++I+ I Y+ + R TPLL Sbjct: 58 FPAELIEGLLVTLQISAISAIATLAIALVTALLRL--SNSIVGKTISTLYIELIRNTPLL 115 Query: 72 VQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 VQ++++++ P +G+ + F +++L L AY +EI+RS +I++PKGQ++A +GL Sbjct: 116 VQIYLLYFVFGPFLGL--ERFTTAVLALALFQGAYTAEILRSGLINLPKGQFEACKTLGL 173 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 ++ + R+++LPQ I + L++E +S++K++S+ S + I ++ + IVS T P Sbjct: 174 SQFNSYRYVVLPQVIRKTLPSLTNELVSLVKNSSIVSVMAIFDLTTEGRNIVSDTAMPFE 233 Query: 191 IYCELAFVYLILT 203 I+ +A +YL++T Sbjct: 234 IWFTVAAIYLMIT 246 >gi|71910050|ref|YP_281600.1| amino acid ABC transporter permease [Streptococcus pyogenes MGAS5005] gi|71852832|gb|AAZ50855.1| ABC transporter amino acid-binding protein/amino acid ABC transporter permease protein [Streptococcus pyogenes MGAS5005] Length = 522 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 105/191 (54%), Gaps = 10/191 (5%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISLIMHFYVWIFRGTPLLVQ 73 +TL I+ + + L IG I + R + ++ Y+ IFRGTP++VQ Sbjct: 298 MTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEIFRGTPMIVQ 357 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 VI+YG GI D +A I +++N AY+SEI+R I ++ KGQ++A+ A+G T Sbjct: 358 SMVIYYGTAQAFGISIDRTLAAIFIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTH 417 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+R I+LPQ + +EF+ +K TSV + I++ E++ + + + TYQ + Sbjct: 418 GQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTF 477 Query: 193 CELAFVYLILT 203 +A +Y +LT Sbjct: 478 TIIAIIYFVLT 488 >gi|51893760|ref|YP_076451.1| amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] gi|51857449|dbj|BAD41607.1| amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] Length = 268 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 120/207 (57%), Gaps = 17/207 (8%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH----FYVWI 64 +I +F +++ + +TL I+ + + +IG ++R +I ++ YV + Sbjct: 48 VIPTFVPIIFEGVKITLQISALGILFGTLIGLVAGLLRSRKPSNLILWALYGLATLYVEV 107 Query: 65 FRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTP LVQL++++YG P GI + A I+L+LN AY++EI R +I SI +GQ Sbjct: 108 VRGTPFLVQLYLMYYG-PFFLFGIDLPAMTAGTIALSLNSGAYVAEIFRGAIESIDRGQM 166 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRI 181 +A ++GLT QT+RHIILPQ + PL++EF S++K +SV S + + +I F+T + Sbjct: 167 EAGRSLGLTFAQTMRHIILPQAFRRALPPLANEFASLIKESSVISVLGVADIMFKT--KT 224 Query: 182 VSTT----YQPLIIYCELAFVYLILTS 204 V T +Q L++ A YL+LT Sbjct: 225 VGTAHFAMFQALLVA---AVYYLVLTG 248 >gi|313496643|gb|ADR58009.1| Polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida BIRD-1] Length = 229 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 122/207 (58%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +I P+L A V+TL + I+ V LI+ + + R + + Y++ F Sbjct: 3 WEVIFKWLPRLAEGA-VLTLELVAIAVVAGLILAIPLGIARSS-RHWYVRAVPFSYIFFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+++YGL V D F ++++TL+ +AYI+EI+R ++ S Sbjct: 61 RGTPLLVQLFLVYYGLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQS 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKG+ +A+ A+G++R + + +I+LP+ S+E I +LK++++AST+T+ E+ Sbjct: 121 IPKGEIEAARALGMSRGKALFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I++ TY P+ I+ YL+++ Sbjct: 181 MARTIIARTYLPVEIFFAAGVFYLVIS 207 >gi|187777535|ref|ZP_02994008.1| hypothetical protein CLOSPO_01126 [Clostridium sporogenes ATCC 15579] gi|187774463|gb|EDU38265.1| hypothetical protein CLOSPO_01126 [Clostridium sporogenes ATCC 15579] Length = 213 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 100/165 (60%), Gaps = 5/165 (3%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + +I+ Y WIFRGTPL++QLF ++GLP IGI + A ++ +N+ AY++E R+ Sbjct: 49 LKIILSAYTWIFRGTPLMLQLFFAYFGLPVIGIRLEPLTAAYLTFIINYGAYLAETFRAG 108 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SI KGQ +A+ +G T QT+ II+PQ I P+ +E I+++K +++ + I I + Sbjct: 109 IESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKDSALVAAIGIGD 168 Query: 174 IFQTAQRIVST--TYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 + + A+ +V+ T P I A +YL++T+F II +E Sbjct: 169 MLRAAKEVVTRDFTITPFFI---AAAIYLLITAFLVIIFRTLEKK 210 >gi|239833265|ref|ZP_04681593.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239821328|gb|EEQ92897.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 231 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 63/173 (36%), Positives = 103/173 (59%), Gaps = 1/173 (0%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 ++F+ I+GF +A+ RI S + LI YV + +GTPLLV +F+I++GLP +G Sbjct: 26 MAFIGGGIVGFIVALGRITPSRAL-RLIAATYVQLIQGTPLLVIMFIIYFGLPTLGFSIT 84 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 A ISLT+ SAY+ EI R + S+PK QW+ + + L+R Q + +ILPQ + + Sbjct: 85 PLFAAGISLTIYVSAYLGEIWRGCLESVPKAQWEGAECLALSRTQRMFKVILPQAVRIAT 144 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 P + I+K+TS+AS + E+ + Q I ++ ++P +IY +A +Y L Sbjct: 145 PPTVGFSVQIVKNTSLASVVGFVELTRAGQLINNSIFEPFLIYLIVAALYFCL 197 >gi|218682669|ref|ZP_03530270.1| amino acid ABC transporter permease [Rhizobium etli CIAT 894] Length = 219 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 116/204 (56%), Gaps = 11/204 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ +SF +G + +RI T ++ +Y+ +F+GTPLL+QLF+ F+GL Sbjct: 20 TILLSLVSFASGGAVGLGLLFLRIGKRKTF-RVLAKYYIELFQGTPLLMQLFIAFFGLGL 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 GI +++A ++LTL +A+++EI R + SI +GQW+AS ++G+ R Q +R++ILPQ Sbjct: 79 FGIDVPAWLAAGLALTLWSAAFLAEIWRGCVESIARGQWEASASLGMVRLQQMRYVILPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + I+K T++ S I E+ + + + T+QP +Y +A +Y L Sbjct: 139 ALRVAIPPTVGFSVQIVKGTALTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFAL- 197 Query: 204 SFCY-------IIQIKIESSVTQH 220 C+ I++ K+ + H Sbjct: 198 --CWPLSKSSQILERKLNVAHRNH 219 >gi|158424241|ref|YP_001525533.1| amino acid ABC transporter, permease protein [Azorhizobium caulinodans ORS 571] gi|158331130|dbj|BAF88615.1| amino acid ABC transporter, permease protein [Azorhizobium caulinodans ORS 571] Length = 219 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 65/185 (35%), Positives = 109/185 (58%), Gaps = 6/185 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 TL + I+ + I G FIA+ R+ S + + L Y+ I +G+P+L+ LF+ +YGL Sbjct: 21 TLVLTAIALTLGGIAGLFIALARV--SPLMPLRLATAAYIQIIQGSPVLMILFLSYYGLS 78 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 IG + VA IS+++ S Y+ +I R I ++PK QW+AS +G+TR Q RHIILP Sbjct: 79 LIGFQLPALVAASISMSIYVSGYLGDIWRGCIEAVPKPQWEASECLGMTRVQQFRHIILP 138 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + + P + + ++K+TS+ S I E+ + Q I ++T+QP ++ +A +Y ++ Sbjct: 139 QALRIALPPTTGFAVQVVKNTSITSIIGFVELSRAGQLINNSTFQPFRVFLTVAAIYFVI 198 Query: 203 TSFCY 207 CY Sbjct: 199 ---CY 200 >gi|89902913|ref|YP_525384.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89347650|gb|ABD71853.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 222 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 125/210 (59%), Gaps = 9/210 (4%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W NLI + VT+ I ++ V+ ++G + + R+ +I + YV + Sbjct: 12 WRNLIQGAS---------VTVEITAMALVLGCVMGLLVGIGRLKPERRVIYALCTSYVAV 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLVQLF++F+GLP I+ +FV +I L + AY+SEI+R SI SI +GQ +A Sbjct: 63 IRGTPLLVQLFLLFFGLPQFDILLPAFVCGVIGLGIYSGAYVSEIVRGSIQSIDRGQMEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G++ +R IILPQ + PL +EFI+++K++++ S +TI ++ Q+I+S Sbjct: 123 ARSVGMSYGTAMRTIILPQALVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISV 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TY+ L +Y +A +Y +LT + +IE Sbjct: 183 TYRSLEVYLAIAAIYFVLTGLTTLALRRIE 212 >gi|254473279|ref|ZP_05086676.1| amino acid ABC transporter, permease protein [Pseudovibrio sp. JE062] gi|211957395|gb|EEA92598.1| amino acid ABC transporter, permease protein [Pseudovibrio sp. JE062] Length = 305 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 120/214 (56%), Gaps = 12/214 (5%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + ++TL + +S ++ +++ + +R+ + I+ I + YV+ FRGTPLL Q+F+I+ Sbjct: 93 SGFIITLKLVAVSMLLGVLLSIPMTFMRMS-KNRILGGIAYGYVYFFRGTPLLAQVFLIY 151 Query: 79 YG-------LPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 YG L + + + D++ +++ TLN +AY EI+R SI SI KGQW+A+ A+ Sbjct: 152 YGAGTFREPLQSVDMWWFFRDAWNCAVLAFTLNTAAYQVEILRGSIESIAKGQWEAASAL 211 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL + T IILPQ + S P +E I ++K +++ + ITI ++ +R S TY Sbjct: 212 GLPKWLTFWKIILPQALIVSLRPYGNEIILMIKGSAIVAIITIYDLMGETRRAFSRTYD- 270 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 Y A YL++ +IE+ +T+H + Sbjct: 271 FQAYVWAAIAYLVMVETLRRAWDRIEARLTRHLH 304 >gi|118473378|ref|YP_884593.1| polar amino acid ABC transporter inner membrane protein [Mycobacterium smegmatis str. MC2 155] gi|118174665|gb|ABK75561.1| ABC polar amino acid family protein transporter, inner membrane subunit [Mycobacterium smegmatis str. MC2 155] Length = 323 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 124/217 (57%), Gaps = 20/217 (9%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 PQ+L + +TL + + I +++G +AV+R+ ++ + + YV FRGTP+LVQ Sbjct: 78 PQIL-EGVRLTLVLTFVCMAIGIVLGTVLAVMRLS-ANPVAQALAFAYVGFFRGTPVLVQ 135 Query: 74 LFVIF----------YGLPHIGIVFDSFV----AIIISLTLNFSAYISEIIRSSIISIPK 119 L F +G+P + I ++ + A ++ L L+ +AY++EIIR I SI Sbjct: 136 LIFWFNFAALYPHLSFGIPGVDIDANALISPVLAGVLGLGLHEAAYMAEIIRGGIGSIDV 195 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ A+GL + Q +R I+LPQ + P +E + +LK++S+ S + + E+ +AQ Sbjct: 196 GQIEAARALGLRKNQVLRRIVLPQAMRVIVPPTGNEVVGMLKTSSLVSVLAVGELLYSAQ 255 Query: 180 RIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 I ++ YQ PL+I L YL+LT+ Q+++E Sbjct: 256 LIYASNYQTIPLLIVASL--WYLVLTAVLSAGQMRLE 290 >gi|302536847|ref|ZP_07289189.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. C] gi|302445742|gb|EFL17558.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. C] Length = 315 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 118/209 (56%), Gaps = 16/209 (7%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP---- 82 I+ + + L +G AV+R+ + + S + Y+W FRGTP+ VQL V ++ LP Sbjct: 83 ISISAMALGLALGILFAVMRLS-KNPVTSFVSWLYIWFFRGTPVYVQLLV-WFSLPLIFQ 140 Query: 83 --HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 ++G ++ + F+ ++ L LN AY++EI+R+ I S+ +GQ +AS+A+G+T+ Sbjct: 141 YINLGPIYKNETVDVMTPFMVALLGLGLNEGAYMAEIVRAGIQSVDEGQTEASHALGMTQ 200 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+R ++LPQ + P +EFI++LK++S+ S + E+ + + I ST + +Y Sbjct: 201 TQTMRRVVLPQAMRVIIPPTGNEFINMLKTSSLVSAVQYTELLRASSNIGSTAGAVIEMY 260 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQHT 221 + YL LTS + Q +E + + Sbjct: 261 FVASIWYLALTSVFSVGQYYLERRYARGS 289 >gi|331701267|ref|YP_004398226.1| polar amino acid ABC transporter inner membrane subunit [Lactobacillus buchneri NRRL B-30929] gi|329128610|gb|AEB73163.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus buchneri NRRL B-30929] Length = 214 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 98/165 (59%), Gaps = 5/165 (3%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 ++ +++FYVWI RGTPLL+QL +FYGLP I IVF + A + + LN++AY EI R Sbjct: 48 LTWLLNFYVWIMRGTPLLLQLIFVFYGLPIIHIVFQRYDAAMFAFILNYTAYFGEIFRGG 107 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 S+PKGQ++++ + L+ QTIR I++PQ + +E I+++K +S+ I + + Sbjct: 108 FQSVPKGQFESAKVLRLSYGQTIRKIVIPQVFKIVLPSIGNEVINLVKDSSLVYVIGLGD 167 Query: 174 IFQTAQRIVS--TTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 + + + T PLI+ + +YL LT+ C I+ IE Sbjct: 168 LLRAGNVATARDVTLLPLIL---VGIIYLALTAVCTIVLKLIEKR 209 >gi|320159829|ref|YP_004173053.1| amino acid ABC transporter permease protein [Anaerolinea thermophila UNI-1] gi|319993682|dbj|BAJ62453.1| amino acid ABC transporter permease protein [Anaerolinea thermophila UNI-1] Length = 274 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 117/215 (54%), Gaps = 15/215 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ + ++F + L++G A+ R+ + L YV + RG PLLVQL+ +Y Sbjct: 60 GLRVTVMVTLVTFGLVLVVGIIGALGRLTHIAPLRGLAT-LYVEVVRGIPLLVQLYFWYY 118 Query: 80 GLPHI--------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 P I V + +V I LTL + AY++E+ R+ I SIPKGQ +A+ Sbjct: 119 AFPSIVRDLGTQWNVESMKNFVANPYVMAIAGLTLCYGAYMTEVYRAGIQSIPKGQMEAA 178 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+T Q +R+IILPQ I P+ +EFI++LK +S+ S + + ++ + + + T Sbjct: 179 RSLGMTYFQAMRYIILPQAIRVILPPVGNEFITLLKDSSLVSAVAVADLTRRGREFQAIT 238 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 PL IY + +YLI+T + IE+ +++ Sbjct: 239 PLPLHIYLMIGLMYLIMTLLSARVVAMIEARMSKE 273 >gi|312869117|ref|ZP_07729291.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3] gi|311095363|gb|EFQ53633.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3] Length = 502 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 65/180 (36%), Positives = 110/180 (61%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I IS + ++G A++R+ S ++ I Y+ RGTP+LVQ+ +++G+ Sbjct: 306 TLIITVISVIFGFLLGTLFALMRLSQS-KLLHGIAICYIEFIRGTPMLVQIMFVYFGIGA 364 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 I + VA II++++N AY++E+IRS I S+P GQ +A+ ++G+T+KQT R I+LPQ Sbjct: 365 IIQSMPALVAGIIAVSVNSGAYVAEVIRSGIQSLPIGQTEAARSLGMTKKQTFRFIVLPQ 424 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + L +EFI++LK +S+ STI + E+ Q + + TY+ ++ +Y ILT Sbjct: 425 ALRNIWPALGNEFITLLKDSSLVSTIGVGELMYQTQLVQADTYKGVLPLFITMMIYFILT 484 >gi|241661638|ref|YP_002979998.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12D] gi|240863665|gb|ACS61326.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] Length = 217 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 103/183 (56%), Gaps = 1/183 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++ TL ++ ++F + G + R+ + T+ + Y+ +F+ TPLL+Q+F++F+ Sbjct: 17 GLLATLMLSLMAFALGGTAGLVVLFARVGRNATL-QRVSKAYIQLFQNTPLLMQMFIVFF 75 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G G + A I LTL SAY++E+ R + +IP+GQW+AS ++ + Q +RH+ Sbjct: 76 GASMAGFEMSPWTAAAIGLTLYTSAYLAEVWRGCVEAIPRGQWEASSSLAMGYFQQMRHV 135 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + S P + I+K T+VAS I ++ + + + T+QP +IY +A Y Sbjct: 136 VLPQAVRLSIAPTVGFSVQIVKGTAVASIIGFEDLSKLGSVLANATFQPFLIYGLVAIGY 195 Query: 200 LIL 202 L Sbjct: 196 FAL 198 >gi|23098460|ref|NP_691926.1| glutamine ABC transporter permease [Oceanobacillus iheyensis HTE831] gi|22776686|dbj|BAC12961.1| glutamine ABC transporter permease [Oceanobacillus iheyensis HTE831] Length = 224 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 118/204 (57%), Gaps = 4/204 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++++WF + + P+L + TL I+ + +I ++G + RI + + ++ Sbjct: 8 LEFDWFR-VFEFLPEL-GKGLYYTLLISIVGLLIGFVLGAIFGLGRIS-KNKFLFVLASI 64 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + RGTP+LVQ IF+ LP I FD VA II + +N AYI+E++R S+ SI K Sbjct: 65 YVEVVRGTPVLVQAIWIFFALPIIIQYNFDPIVAGIIVIAINSGAYIAEVVRGSVDSIDK 124 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A ++GLT+ QT+R+II PQ PL ++FI +K TS+ S I +PE+ + Sbjct: 125 GQIEAGRSLGLTKNQTMRYIIWPQAFKRMIPPLGNQFIISIKDTSLLSVILVPELMFQGR 184 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 IVS + + IY +A YL +T Sbjct: 185 LIVSNQFIAVEIYTAVALFYLAIT 208 >gi|323492220|ref|ZP_08097378.1| ABC transporter ATP-binding/permease protein [Vibrio brasiliensis LMG 20546] gi|323313533|gb|EGA66639.1| ABC transporter ATP-binding/permease protein [Vibrio brasiliensis LMG 20546] Length = 264 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 66/196 (33%), Positives = 122/196 (62%), Gaps = 8/196 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL-IMHFYVWIFRGTP 69 + +P L ++VT+ I+ +S +L+IG A +++ SD+ + + + Y+ + R TP Sbjct: 53 EWWPAELLEGLLVTIKISALSLAFTLLIGLTTAALKL--SDSWVGRGLANIYIEVIRNTP 110 Query: 70 LLVQLFVIFY--GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 LLVQ++++++ G P IG+ D F +++L+L AY +E+ R + SIPKGQ++A+ + Sbjct: 111 LLVQIYLLYFIFG-PVIGL--DRFATAVLALSLFQGAYTAEVFRGGLNSIPKGQFEAAKS 167 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL+R T +ILPQ + + PL++E +S++K++S+ S + I ++ + IVS T Sbjct: 168 LGLSRFFTFYDVILPQLLQRTLPPLTNEVVSLIKNSSIVSVMAIFDLTTEGRNIVSETAM 227 Query: 188 PLIIYCELAFVYLILT 203 P I+ +A +YL LT Sbjct: 228 PFEIWFTVAAIYLTLT 243 >gi|28870260|ref|NP_792879.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|213970378|ref|ZP_03398507.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301381161|ref|ZP_07229579.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302132574|ref|ZP_07258564.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28853507|gb|AAO56574.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213924849|gb|EEB58415.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|331016475|gb|EGH96531.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 221 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 68/197 (34%), Positives = 113/197 (57%), Gaps = 9/197 (4%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + + P L A+ VTL + I+ + SL + A I +F ++ ++ YV + R TP Sbjct: 9 LSTLPAFL-KAVGVTLQVGLIAILTSLSVAIINAAIAMF-RVPVLHRLVPVYVELARNTP 66 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+QLF I++ LP +GI F + +I++T AY++EI+R+ I ++PK Q ++ +IG Sbjct: 67 LLIQLFFIYFALPTMGIRVSGFASAVIAMTFLGGAYLTEILRAGIEAVPKAQIESGLSIG 126 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+R Q +RH+ILPQ S L + F+ +LK T+V S + +PEI T + ++ Y+ Sbjct: 127 LSRWQLLRHVILPQAGILSLPALFANFVFLLKETTVVSAVAVPEILYTTKSYIALYYK-- 184 Query: 190 IIYCELAFVYLILTSFC 206 Y LA ++T C Sbjct: 185 -TYEMLA----VMTGLC 196 >gi|66046175|ref|YP_236016.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63256882|gb|AAY37978.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] Length = 221 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 70/197 (35%), Positives = 112/197 (56%), Gaps = 9/197 (4%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I + P L AI VTL + I+ + SL + A I F ++ ++ YV + R TP Sbjct: 9 ISTLPAFL-KAIGVTLQVGLIAILTSLTVAVVNAAIATF-KVPVLHRLVPVYVELARNTP 66 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+QLF I++ LP +GI F + +I++T AY++EI+R+ I ++PK Q ++ +IG Sbjct: 67 LLIQLFFIYFALPTLGIRVSGFASAVIAMTFLGGAYLTEILRAGIEAVPKTQIESGLSIG 126 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+R Q +RH+ILPQ S L + F+ +LK T+V S + +PEI T + ++ Y+ Sbjct: 127 LSRWQLLRHVILPQAGILSLPALFANFVFLLKETTVVSAVAVPEILYTTKSYIALYYK-- 184 Query: 190 IIYCELAFVYLILTSFC 206 Y LA ++T C Sbjct: 185 -TYEMLA----VMTGLC 196 >gi|322420357|ref|YP_004199580.1| polar amino acid ABC transporter inner membrane subunit [Geobacter sp. M18] gi|320126744|gb|ADW14304.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter sp. M18] Length = 266 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 112/203 (55%), Gaps = 1/203 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++Y W + S+ + +VTL I+ S V SL IG A + S + + Sbjct: 47 LQYGWDWTAVYSYRRKFLTGWLVTLAISAASLVTSLTIGL-CAALSQRSSFLPLRFLGKI 105 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + RGTPLLVQ+ V FY + + + ++ I++L L AYISEIIR+ I SI + Sbjct: 106 YIELIRGTPLLVQILVFFYVVADAFGIGNRYLVGILTLALFAGAYISEIIRAGIESIGES 165 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ AIGLTR+QT R ++ PQ + PL+ +F S++K +S+ S I + E AQ Sbjct: 166 QLESARAIGLTRRQTYRFVVFPQVMRRILPPLAGQFASLIKDSSLLSIIAVSEFTLNAQE 225 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + + TY + Y LA YL LT Sbjct: 226 VNAFTYSTMESYLPLALGYLALT 248 >gi|153010785|ref|YP_001371999.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC [Ochrobactrum anthropi ATCC 49188] gi|151562673|gb|ABS16170.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuC [Ochrobactrum anthropi ATCC 49188] Length = 219 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 64/177 (36%), Positives = 99/177 (55%), Gaps = 1/177 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ +T+ +A S I ++ F + R F I+S I Y+ IFRGT LLVQLF Sbjct: 10 LFKGAQITVVLALSSMAIGTLLAFAAGIAR-FAGGPILSTIAVIYIEIFRGTSLLVQLFW 68 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++Y LP IGI FD I+ L LN AY +E++R ++ ++P+ Q +A+ A+ +R T+ Sbjct: 69 LYYALPLIGISFDPITTGIMGLGLNIGAYGAEVVRGALQAVPEAQHEAARALNFSRGHTL 128 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 HI+LPQ + + I LK T++AS I I ++ AQR+ + T + IY Sbjct: 129 FHIVLPQAVVEMMPAFGNLAIHNLKDTALASLIAISDLTFQAQRLRNLTLDNVTIYS 185 >gi|46579090|ref|YP_009898.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|120603329|ref|YP_967729.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris DP4] gi|46448503|gb|AAS95157.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio vulgaris str. Hildenborough] gi|120563558|gb|ABM29302.1| amino acid ABC transporter membrane protein 2, PAAT family [Desulfovibrio vulgaris DP4] Length = 295 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 49/127 (38%), Positives = 85/127 (66%) Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 +F++ +++L + AYISEI+R+ I S+P+GQWDAS + GL Q +RH+ILPQ + Sbjct: 162 LSAFLSAVVTLAIYEGAYISEIVRAGIESVPRGQWDASSSFGLGPVQQMRHVILPQALRH 221 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + PL+ +FISI+K +++ S I++PE+ +++ TYQ I+ +A +YL+LT C Sbjct: 222 AVPPLAGQFISIIKDSAIVSVISVPELTFQGMELMAATYQTFEIWTTIALLYLVLTLGCS 281 Query: 208 IIQIKIE 214 ++ ++E Sbjct: 282 LVAERLE 288 >gi|271966876|ref|YP_003341072.1| polar amino acid ABC transporter inner membrane protein [Streptosporangium roseum DSM 43021] gi|270510051|gb|ACZ88329.1| polar amino acid ABC transporter, inner membrane subunit [Streptosporangium roseum DSM 43021] Length = 304 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 120/226 (53%), Gaps = 20/226 (8%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + VT+ + +S VI L +G AV+++ S ++ Y W FRGTPLLVQL F Sbjct: 65 GGLWVTIQLTVLSMVIGLALGILAAVMQLSGS-PVLRGASALYTWFFRGTPLLVQLIFWF 123 Query: 79 Y-GL--P--HIGIVFDS--------------FVAIIISLTLNFSAYISEIIRSSIISIPK 119 GL P IG+ FD F A ++ L +N AY++EI+R+ I S+ Sbjct: 124 NIGLVFPSFGIGVPFDGPKLIEWQANELITPFTAALLGLAINEGAYMAEIVRAGIRSVDP 183 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ A+G++ +Q +R ++LPQ + P ++FIS+LK+TS+ S I E+ +Q Sbjct: 184 GQREAAEALGMSHRQVLRRVVLPQAMRVIIPPTGNQFISMLKTTSMVSVIAGAELLTVSQ 243 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 RI ++ + + + Y++LT+ + Q IE + +++ Sbjct: 244 RIYLGNFEVIAMLIVASIWYIVLTTIASVGQHFIEKRFERGHHALQ 289 >gi|322804727|emb|CBZ02279.1| amino acid ABC transporter, permease protein [Clostridium botulinum H04402 065] Length = 214 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 98/158 (62%), Gaps = 5/158 (3%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + +I+ Y WIFRGTPL++QLF ++GLP IGI + A ++ +N+ AY++E R+ Sbjct: 50 LKIILSAYTWIFRGTPLMLQLFFAYFGLPVIGIRLEPLTAAYLTFIINYGAYLAETFRAG 109 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SI KGQ +A+ +G T QT+ II+PQ I P+ +E I+++K +++ + I I + Sbjct: 110 IESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKDSALVAAIGIGD 169 Query: 174 IFQTAQRIVST--TYQPLIIYCELAFVYLILTSFCYII 209 + + A+ +V+ T P I A +YL++T+F II Sbjct: 170 MLRAAKEVVTRDFTITPFFI---AAAIYLLITAFLVII 204 >gi|257125144|ref|YP_003163258.1| polar amino acid ABC transporter inner membrane protein [Leptotrichia buccalis C-1013-b] gi|257049083|gb|ACV38267.1| polar amino acid ABC transporter, inner membrane subunit [Leptotrichia buccalis C-1013-b] Length = 237 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 75/220 (34%), Positives = 129/220 (58%), Gaps = 19/220 (8%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W ++ + P++L A+ +TL IA ++ + SLI+ FFIA++RI +++ + YV Sbjct: 9 NW-GFMVRAIPEIL-KALPMTLNIAIVTMIFSLILSFFIALVRIN-KIPVLTRLATIYVS 65 Query: 64 IFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAII---ISLTLNFSAYISEII 110 RGTPLLVQ+++ +YGLP I I ++ AII ++ LN S Y+SE Sbjct: 66 FIRGTPLLVQIYLAYYGLPKILDYIHLKYGFNIDVNNIPAIIFVYVAFILNVSGYLSETF 125 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R++I S+ KGQ +A+ +IG+T+ Q +R I+LPQ I + + FIS++K +S+A T++ Sbjct: 126 RAAIQSVDKGQVEAALSIGMTKWQAMRRIVLPQAIIITFPNFGNTFISLIKDSSLAFTVS 185 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 I E+ A+ I ++ Y +A +Y ++ C I++ Sbjct: 186 IVEMMGKAKIISASGLDIFEAYIVVAGIYWVV---CIIVE 222 >gi|157825310|ref|YP_001493030.1| amino acid ABC transporter permease protein [Rickettsia akari str. Hartford] gi|157799268|gb|ABV74522.1| amino acid ABC transporter permease protein [Rickettsia akari str. Hartford] Length = 218 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 124/207 (59%), Gaps = 7/207 (3%) Query: 5 WFNLIIDSFPQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 F +I +P++L+ +VTL + I+ ++ L+IG +A+ ++ + + L +FY Sbjct: 1 MFEYLIKFYPKILFIVEGTLVTLKYSIIAVILGLVIGMLLAICKVN-KNRALRLCANFYT 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 IFRGTPLL+QL +I++ P+I G+ F F+A I+ +LN AY+SE+IR+ I ++ KGQ Sbjct: 60 SIFRGTPLLIQLTIIYFASPYIIGVKFSVFMAGAIAFSLNSGAYVSEVIRAGINAVDKGQ 119 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++A+ A+ + + ++ IILPQ + L +E ++++K +++ S + ++ + AQ + Sbjct: 120 FEAAEALAIPKFLIMKDIILPQAVKNIFPSLVNELVNLIKESAIISMLGEMDLMRRAQIV 179 Query: 182 VSTTYQ---PLIIYCELAFVYLILTSF 205 TY P+ I ++ ++L SF Sbjct: 180 SIETYNYFFPMSIAACCYYILVMLISF 206 >gi|326804125|ref|YP_004321943.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] gi|326650324|gb|AEA00507.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] Length = 505 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 73/192 (38%), Positives = 120/192 (62%), Gaps = 14/192 (7%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + I +TL I+ +S V L +G +AV+R+ + I+S I YV RGTPL++Q+ + Sbjct: 303 WNGIKMTLLISAVSVVFGLTLGAILAVMRLT-ENKILSGIAMAYVEFIRGTPLMIQVLFM 361 Query: 78 FYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 F G IG +F+ + ++ +I+++LN AYISEIIR I ++ K Q +A+ ++GL R T Sbjct: 362 FLG---IGGLFNVPALLSALIAVSLNSGAYISEIIRGGIQAVDKEQTEAARSLGLDRLTT 418 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVSTTYQ---PLII 191 ++ +I PQ++ + L +EF++++K +S+ STI I E+ FQT + + S TYQ PL+I Sbjct: 419 LKKVIFPQSLRSIWPALGNEFVTLIKESSIVSTIGIAELTFQT-RAVTSITYQGIIPLLI 477 Query: 192 YCELAFVYLILT 203 +Y ILT Sbjct: 478 SM---VIYFILT 486 >gi|325261529|ref|ZP_08128267.1| amino acid ABC transporter, permease/substrate-binding protein [Clostridium sp. D5] gi|324032983|gb|EGB94260.1| amino acid ABC transporter, permease/substrate-binding protein [Clostridium sp. D5] Length = 230 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 122/225 (54%), Gaps = 19/225 (8%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHF 60 + N I D+ + + + VTL + + +I ++IGF IA+IR + T I++ I Sbjct: 10 YGNFIEDNRWEYILDGLGVTLQVTFFAVIIGIVIGFLIAIIRSTYDKTGKLKILNFICKI 69 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDS-----FVAIIISLTLNFSAYISEIIRSSII 115 Y+ + RGTP++VQL +I++ ++F S + I++ N AY++EI RS I+ Sbjct: 70 YLTVIRGTPVVVQLLIIYF------VIFGSADISKVLVAIMAFGFNSGAYVAEIFRSGIM 123 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SI GQ++A ++G QT+ HII+PQ L +EFI +LK TSV+ I + ++ Sbjct: 124 SIDNGQFEAGRSLGFNYVQTMIHIIMPQAFKNVLPALGNEFIVLLKETSVSGYIALQDLT 183 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLIL----TSFCYIIQIKIESS 216 + I S TY + +A +YL++ T +++ ++ +S Sbjct: 184 KGGDIIRSRTYDAFMPLIAVALIYLVMVMIFTKLVNMLERRLRNS 228 >gi|167564742|ref|ZP_02357658.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia oklahomensis EO147] gi|167574722|ref|ZP_02367596.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia oklahomensis C6786] Length = 248 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 73/227 (32%), Positives = 128/227 (56%), Gaps = 17/227 (7%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFF--IAVIRIFFSDTII-SLIMHFYV 62 F+ + D+ QLL AA+ TL + F SL++G IAV+ + S + + Y+ Sbjct: 5 FDFLTDTLRQLL-AAVPTTLGL----FFSSLVLGGLLSIAVVAMRVSPHWLPNRFARLYI 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSS 113 IFRG+PLL+Q+F+++YGL G++ +SF + ++SL L + Y +EIIR Sbjct: 60 LIFRGSPLLIQMFLVYYGLGQFGVIRESFMWPMLRDPYICAVLSLALCTAGYTAEIIRGG 119 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++++P GQ +A YAIGL+ +R +I P + S+E + ++KST++AS +T+ E Sbjct: 120 LMAVPVGQIEAGYAIGLSGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWE 179 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + AQ+I+ TY+ ++ A +YL L + +E +++H Sbjct: 180 VTGVAQQIIQQTYRTTEVFVCAALIYLGLNFVIVRVLGALEWRLSRH 226 >gi|298254350|ref|ZP_06977936.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae str. Canada MDR_19A] Length = 721 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 128/222 (57%), Gaps = 14/222 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYV 62 W L+ +++ QLL + + +TL + ISF I+++IG + + + S +IS I +V Sbjct: 504 W-GLLQNNYKQLL-SGLGITLALTLISFAIAIVIGIIFGMFSVSPYKSLRVISEI---FV 558 Query: 63 WIFRGTPLLVQLFVIFYGLPH-----IGIV--FDSFVAIIISLTLNFSAYISEIIRSSII 115 + RG PL++ IF+G+P+ G + FVA I+L+LN +AYI+EI+R I Sbjct: 559 DVIRGIPLMILAAFIFWGIPNFIESITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQ 618 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P GQ +AS ++G++ +T+R IILPQ ++F+ LK T++ S I + E+F Sbjct: 619 AVPVGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELF 678 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 QT + I++ YQ +Y LA YL++ + + ++E + Sbjct: 679 QTGKIIIARNYQSFKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|322377150|ref|ZP_08051642.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus sp. M334] gi|321281863|gb|EFX58871.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus sp. M334] Length = 521 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 60/173 (34%), Positives = 106/173 (61%), Gaps = 3/173 (1%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ I++ Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R Sbjct: 338 LVGWILNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVR 397 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I+++ KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ Sbjct: 398 GGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISV 457 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQHTYS 223 E++ + + + TYQ + +A +Y +LT + I++ IE + TY+ Sbjct: 458 VELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRF-IERRMDMDTYT 509 >gi|315644842|ref|ZP_07897971.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus vortex V453] gi|315279784|gb|EFU43085.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus vortex V453] Length = 216 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 121/216 (56%), Gaps = 12/216 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W NL + L +T+ +A +S + S IIG + +R + +S F+V Sbjct: 7 YSWPNL------RYLLQGFWITVQVAGLSIIFSFIIGTVLGTVR-YTRTPFLSRTTAFFV 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F I LP GI +F A ++ L++ A I+EI+RS ++S+ KGQ Sbjct: 60 DIIRNLPLLLIIFFIGMVLPQTGIRIPTFWAAVVGLSIFEGAMIAEIVRSGLVSVDKGQI 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A GL+ QT+RH+ILP + + P+ S+FIS++K TS+A I++PE+ + Q + Sbjct: 120 EAARASGLSYMQTLRHVILPLALRRMSPPMVSQFISLIKDTSLAVIISLPELMRNVQILS 179 Query: 183 STTYQ---PLIIYCELAFVYLILTSFCYIIQIKIES 215 ++Y P +++ L +Y L II ++E+ Sbjct: 180 GSSYSYVIPALVFASL--LYFTLNYLLSIIAKQLEA 213 >gi|313617589|gb|EFR89902.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria innocua FSL S4-378] Length = 486 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++T+ +A I + I+G +A++++ + I Y+ RGTPLL+Q+F++F+ Sbjct: 286 GTLITIALAAIGVLCGAILGSLLALMKLAKT-RWIRWPAACYIEFVRGTPLLIQIFIVFF 344 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G IG+ +FV+ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+T+ ++R+I Sbjct: 345 GTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYI 404 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L +EF++++K +S+ S I + E+ + +++P I + +Y Sbjct: 405 ILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIY 464 Query: 200 LILT 203 +LT Sbjct: 465 FVLT 468 >gi|313624521|gb|EFR94518.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria innocua FSL J1-023] Length = 480 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 124/217 (57%), Gaps = 3/217 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 + +I S+P LL A + +T+ +A +S +I+ IIG +++ S I+ I YV I Sbjct: 266 FMGIIKSSWPALL-AGMWLTIRLAVVSLIIAFIIGITFGFMKVSNS-KILRGIATVYVDI 323 Query: 65 FRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTPL+VQ F ++G+P + F+A +I+L+LN AY+ EI+R I S+ KGQ + Sbjct: 324 FRGTPLIVQAFFFYFGIPAALDFRMPVFLAGVIALSLNAGAYMVEIVRGGIQSVDKGQME 383 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++GL K+ + ++LPQ I ++F+ LK TS+ S I + E+ Q+ + I++ Sbjct: 384 AARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQSGKIIMA 443 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T++ + + +YLI+ + + ++E + Sbjct: 444 RTFESTWTWLIIGIMYLIVITILTKVSDRLERRLRND 480 >gi|296110461|ref|YP_003620842.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opinefamily [Leuconostoc kimchii IMSNU 11154] gi|295831992|gb|ADG39873.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opinefamily [Leuconostoc kimchii IMSNU 11154] Length = 491 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/152 (38%), Positives = 96/152 (63%), Gaps = 2/152 (1%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 I+ + + YV RGTPLLVQ F++F+G IG+ +F A +++ LN +AY++EIIRS Sbjct: 322 ILKAVGNIYVEYIRGTPLLVQAFMVFFGTQVIGLNLSAFAAGALAMGLNSAAYVAEIIRS 381 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I S+ GQ +A+ ++GL++ + +R+IILPQ + L +EF++I+K SV S I + Sbjct: 382 GINSVNYGQTEAARSLGLSKGKAMRYIILPQAVKNILPALGNEFVTIIKEGSVVSVIGVG 441 Query: 173 EI-FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+ FQT + +++P +F+Y +LT Sbjct: 442 ELMFQTG-VVQGASFKPFFPLLITSFIYFVLT 472 >gi|16799914|ref|NP_470182.1| hypothetical protein lin0840 [Listeria innocua Clip11262] gi|16413291|emb|CAC96072.1| lin0840 [Listeria innocua Clip11262] gi|313619849|gb|EFR91431.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria innocua FSL S4-378] Length = 480 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 124/217 (57%), Gaps = 3/217 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 + +I S+P LL A + +T+ +A +S +I+ IIG +++ S I+ I YV I Sbjct: 266 FMGIIKSSWPALL-AGMWLTIRLAVVSLIIAFIIGITFGFMKVSNS-KILRGIATVYVDI 323 Query: 65 FRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTPL+VQ F ++G+P + F+A +I+L+LN AY+ EI+R I S+ KGQ + Sbjct: 324 FRGTPLIVQAFFFYFGIPAALDFRMPVFLAGVIALSLNAGAYMVEIVRGGIQSVDKGQME 383 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++GL K+ + ++LPQ I ++F+ LK TS+ S I + E+ Q+ + I++ Sbjct: 384 AARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQSGKIIMA 443 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T++ + + +YLI+ + + ++E + Sbjct: 444 RTFESTWTWLIIGIMYLIVITILTKVSDRLERRLRND 480 >gi|6706991|gb|AAF25532.1|AF104994_2 permease [Streptomyces coelicolor A3(2)] Length = 313 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 120/219 (54%), Gaps = 25/219 (11%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + TL I ++ +I ++ G +AV+R+ + + S I FY+W FRGTP LV Sbjct: 66 FDDRVLTGMGKTLLITVLAMLIGVVGGILLAVMRLS-KNPVTSSIAWFYIWFFRGTPQLV 124 Query: 73 QLFVIFYGLPHIGIVFD-----------------SFVAIIISLTLNFSAYISEIIRSSII 115 F ++G+VF+ F+ ++ L LN +AY++EI R+ ++ Sbjct: 125 VWF-------NLGLVFEYINLGPFYRDEWSDFMTPFLTALLGLGLNEAAYMAEICRAGLL 177 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ +GQ +A++A+G++ +T+R I++PQ + P +E I++LK+TS+ S + E+F Sbjct: 178 AVDEGQTEAAHALGMSHTKTLRRIVVPQAMRVIVPPTGNEVINMLKTTSLVSVVQYAELF 237 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + AQ I T+ P + A YL+LTS + Q +E Sbjct: 238 RVAQDIGQTSGAPAEMLFLAAAWYLLLTSVFSVGQYYLE 276 >gi|327440167|dbj|BAK16532.1| ABC-type amino acid transport system, permease component [Solibacillus silvestris StLB046] Length = 248 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 76/227 (33%), Positives = 125/227 (55%), Gaps = 22/227 (9%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI-----RIFFSDTIISLIMHF 60 +NL +++ + A L +A I + ++GFFI ++ R +I+ + +F Sbjct: 8 WNLFTNNWDLFVRGAWTALL-LAIIGTICGTLVGFFIGIMHTIPQRKKNVKSIVLKVFNF 66 Query: 61 ----YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 YV IFRGTP++VQ V+FYGL ++GI D F+A + ++LN AY++E +R I+S Sbjct: 67 ILTSYVEIFRGTPMMVQAMVVFYGLVYLGIDIDRFLAASVVISLNTGAYMAEYVRGGIVS 126 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I KGQ++A+ AIG+ QT+ HI+LPQ ++F+ +K +SV S I++ E+F Sbjct: 127 IDKGQFEAAQAIGMNHLQTMIHIVLPQVARNILPATGNQFVMNIKDSSVLSVISVVELFF 186 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLIL--------TSFCYIIQIKIES 215 TA I + Y+ Y E F+ IL T F + + K++ Sbjct: 187 TANSIAGSNYK----YIEAFFIATILYFIMTFTVTRFLLLFEKKMDG 229 >gi|116872260|ref|YP_849041.1| glutamine ABC transporter binding and transport protein, putative [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741138|emb|CAK20258.1| glutamine ABC transporter binding and transport protein, putative [Listeria welshimeri serovar 6b str. SLCC5334] Length = 480 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 124/217 (57%), Gaps = 3/217 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 + +I S+P LL A + +T+ +A +S +I+ IIG +++ S I+ I YV I Sbjct: 266 FMGIIKSSWPALL-AGMWLTIRLAVVSLIIAFIIGITFGFMKVSNS-KILRGIATVYVDI 323 Query: 65 FRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTPL+VQ F ++G+P + F+A +I+L+LN AY+ EI+R I S+ KGQ + Sbjct: 324 FRGTPLIVQAFFFYFGIPAALDFRMPVFLAGVIALSLNAGAYMVEIVRGGIQSVDKGQME 383 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++GL K+ + ++LPQ I ++F+ LK TS+ S I + E+ Q+ + I++ Sbjct: 384 AARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQSGKIIMA 443 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T++ + + +YLI+ + + ++E + Sbjct: 444 RTFESTWTWLIIGIMYLIVITILTKVSDRLERRLRND 480 >gi|288905199|ref|YP_003430421.1| amino acid ABC transporter permease [Streptococcus gallolyticus UCN34] gi|306831269|ref|ZP_07464429.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978173|ref|YP_004287889.1| polar amino acid ABC transporter membrane protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731925|emb|CBI13490.1| Putative amino acid ABC transporter, permease protein [Streptococcus gallolyticus UCN34] gi|304426505|gb|EFM29617.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178101|emb|CBZ48145.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 213 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 118/211 (55%), Gaps = 9/211 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRG 67 I+ P LL A VTL + CI V+S+ G +A +++I F + ++ YVWI RG Sbjct: 4 ILQVLPSLLDGA-KVTLQVFCIVIVLSIPFGAVLAFLMQIKFKP--LQWLLTLYVWIMRG 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL +Y LP +G+V D A I++ TLN++AY +EI R I +IPKGQ++A+ Sbjct: 61 TPLLLQLIFFYYVLPSVGVVMDRLPAAILAFTLNYAAYFAEIFRGGIAAIPKGQYEAAKV 120 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TT 185 + L + QTI +IILPQ + +E I+++K +S+ + + ++ ++ + T Sbjct: 121 LKLNQLQTIHYIILPQVFKIVLPSVFNEIINLVKDSSLVYVLGVGDLLLASKTAANRDAT 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 P+ + +YL++ +I + E Sbjct: 181 LAPMFVAGA---IYLLMIGVVTLISKQTEKK 208 >gi|219670551|ref|YP_002460986.1| polar amino acid ABC transporter inner membrane subunit [Desulfitobacterium hafniense DCB-2] gi|219540811|gb|ACL22550.1| polar amino acid ABC transporter, inner membrane subunit [Desulfitobacterium hafniense DCB-2] Length = 219 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/169 (34%), Positives = 106/169 (62%), Gaps = 6/169 (3%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + ++ V+S+ +G +++ RI + S I Y+W+FRGTPL++QL +++GLP Sbjct: 17 VTLKMFFVTIVMSVPLGLMLSLGRISRFGVLRSAI-GVYIWVFRGTPLMLQLLFVYFGLP 75 Query: 83 HIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 I ++ + F A I++ LN++AY +EI R+ I SI +GQ++ + A+G+T Q +R Sbjct: 76 FIPVIGEILILTDFQAAILAFVLNYAAYFAEIFRAGIQSIERGQYEGARALGMTYGQLMR 135 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 IILPQ + P+S+E I+++K TS+ + + ++ +T + +V + Sbjct: 136 RIILPQVVKRVLPPVSNETITLVKDTSLIYVLAMNDLLRTTRALVQRDF 184 >gi|167745442|ref|ZP_02417569.1| hypothetical protein ANACAC_00133 [Anaerostipes caccae DSM 14662] gi|317473006|ref|ZP_07932308.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA] gi|167655163|gb|EDR99292.1| hypothetical protein ANACAC_00133 [Anaerostipes caccae DSM 14662] gi|316899515|gb|EFV21527.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA] Length = 223 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 118/215 (54%), Gaps = 11/215 (5%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +WF + LL+ + TL I ++ V L +G +A+ R+ II L + FY+ Sbjct: 7 QWFEKLPGIADMLLHNGLDQTLIIFFLTLVFGLTLGLVLALGRMT-RFKIIQLPVRFYLL 65 Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I RGTPL++QL+ ++GL + GI + +A +++ +LN++AY +EI RS I +IP GQ+ Sbjct: 66 IMRGTPLILQLYGFYFGLNLLLGIRIERTMAAVVAFSLNYAAYFAEIYRSGIQAIPNGQY 125 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ +G + QT IILPQ + P+ SE ++++K TS+A I + EI+ A + Sbjct: 126 EAAKVLGFGKAQTFFKIILPQVVKIILPPMGSECMTLVKDTSLAHVIGVMEIYVVAANNM 185 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 S + YLI+ Y+I I S V Sbjct: 186 SRSR---------GMEYLIVAGIFYLIMNMIVSKV 211 >gi|138897015|ref|YP_001127468.1| amino acid ABC transporter permease [Geobacillus thermodenitrificans NG80-2] gi|196249837|ref|ZP_03148533.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. G11MC16] gi|134268528|gb|ABO68723.1| Amino acid ABC transporter (permease) [Geobacillus thermodenitrificans NG80-2] gi|196210713|gb|EDY05476.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. G11MC16] Length = 218 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 122/199 (61%), Gaps = 3/199 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I++ P + ++VT+ ++ V LI+G FI + ++ +I L +Y+ F Sbjct: 5 FDIIVEYAP-YFWKGLLVTIGVSLAGIVFGLILGLFIGLGKMS-RHPLIRLPFTWYINFF 62 Query: 66 RGTPLLVQLFVIFYG-LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL+VQ+ ++ +G +P + ++ V++++SL+LN +AY++EI R+ I SI KGQ +A Sbjct: 63 RGTPLVVQILLVHFGAMPLLLAEPNALVSLVVSLSLNSAAYVAEIFRAGIQSIDKGQMEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G+T Q +R+IILPQ + P ++EFI ++K +S+ I PEI + Sbjct: 123 ARSLGMTHAQAMRYIILPQALKRMIPPFANEFIVLIKDSSLGMIIAAPEIMYWGKAAAGE 182 Query: 185 TYQPLIIYCELAFVYLILT 203 Y+ Y +AF+YLILT Sbjct: 183 YYRVWEPYLTVAFIYLILT 201 >gi|311232935|gb|ADP85789.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris RCH1] Length = 314 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 49/127 (38%), Positives = 85/127 (66%) Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 +F++ +++L + AYISEI+R+ I S+P+GQWDAS + GL Q +RH+ILPQ + Sbjct: 181 LSAFLSAVVTLAIYEGAYISEIVRAGIESVPRGQWDASSSFGLGPVQQMRHVILPQALRH 240 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + PL+ +FISI+K +++ S I++PE+ +++ TYQ I+ +A +YL+LT C Sbjct: 241 AVPPLAGQFISIIKDSAIVSVISVPELTFQGMELMAATYQTFEIWTTIALLYLVLTLGCS 300 Query: 208 IIQIKIE 214 ++ ++E Sbjct: 301 LVAERLE 307 >gi|167628304|ref|YP_001678803.1| glutamine abc transporter, glutamine-binding protein, putative [Heliobacterium modesticaldum Ice1] gi|167591044|gb|ABZ82792.1| glutamine abc transporter, glutamine-binding protein, putative [Heliobacterium modesticaldum Ice1] Length = 217 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 118/200 (59%), Gaps = 2/200 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E +N ++ PQ ++ + VT+ + S ++S++IG IA++R+ +++ YV Sbjct: 2 EQWNDLLAYGPQF-FSGLKVTIEVTLYSLLLSMVIGVAIAILRVS-GFKVLNAFGVAYVE 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 F+ TPLL+Q+F I++G P +GI F I L + AYI E+ R+ I ++PKGQ + Sbjct: 60 FFQNTPLLIQVFFIYFGTPAMGIKLSGFACGTIGLAMYTGAYIGEVFRAGIQAVPKGQME 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ + G+ Q + +++LPQ + PL+++ ++++K++++ STI + ++ RI S Sbjct: 120 AARSSGMNYLQAMGYVVLPQAVKIILPPLTNQVVNMVKNSAILSTIVVADLMYETYRIAS 179 Query: 184 TTYQPLIIYCELAFVYLILT 203 T+ ++ A +YL++T Sbjct: 180 ETFIIFEVFIFAALLYLVIT 199 >gi|52144882|ref|YP_081947.1| amino acid ABC transport system, permease [Bacillus cereus E33L] gi|51978351|gb|AAU19901.1| amino acid ABC transport system, permease [Bacillus cereus E33L] Length = 269 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 65/187 (34%), Positives = 111/187 (59%), Gaps = 3/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A IV TL + S V+ +IG A RI ++ ++ I H Y+ I Sbjct: 41 FEIFMSTYPTLLKATIV-TLQLTLTSLVLGSLIGLLFAFFRIS-NNKFLNSIAHVYIAII 98 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 99 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAA 157 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 158 RSLGMPYSLAMRRIVLPQAFRQSIPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGN 217 Query: 186 YQPLIIY 192 +Q L Y Sbjct: 218 FQQLETY 224 >gi|77414369|ref|ZP_00790524.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] gi|77159559|gb|EAO70715.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] Length = 174 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 59/148 (39%), Positives = 94/148 (63%), Gaps = 2/148 (1%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RG PL+V LF+I++GLP IGI D+ A I+ T+ SAYISEIIR++++++ GQW+ Sbjct: 19 LMRGIPLMVLLFLIYFGLPFIGIQLDAVTASIVGFTMMSSAYISEIIRAALLAVDHGQWE 78 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GL R II+PQ + LS+ + ++K +S+ + IT+P+IF A +IV Sbjct: 79 AARALGLKTPTIYRGIIIPQATRIALPSLSNVLLDMVKGSSLTAMITVPDIFNNA-KIVG 137 Query: 184 TTYQP-LIIYCELAFVYLILTSFCYIIQ 210 TY + Y +A +Y ++ + IIQ Sbjct: 138 GTYSDYMTAYILVALIYWVICTLYAIIQ 165 >gi|307711328|ref|ZP_07647748.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] gi|307616844|gb|EFN96024.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] Length = 521 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 55/152 (36%), Positives = 96/152 (63%), Gaps = 1/152 (0%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ I++ Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R Sbjct: 338 LVGWILNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVR 397 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I+++ KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ Sbjct: 398 GGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISV 457 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E++ + + + TYQ + +A +Y +LT Sbjct: 458 VELYFSGNTVATQTYQYFQTFTIIAVIYFVLT 489 >gi|289168650|ref|YP_003446919.1| ABC transporter permease and substrate-binding protein, amino acid transport [Streptococcus mitis B6] gi|288908217|emb|CBJ23059.1| ABC transporter permease and substrate-binding protein, amino acid transport [Streptococcus mitis B6] Length = 521 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 55/152 (36%), Positives = 97/152 (63%), Gaps = 1/152 (0%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++S I++ Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R Sbjct: 338 LVSWILNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVR 397 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I+++ KGQ++A+ A+G++ QT+R I+LPQ + +EF+ +K TSV + I++ Sbjct: 398 GGILAVDKGQFEAATALGMSHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISV 457 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E++ + + + TYQ + +A +Y +LT Sbjct: 458 VELYFSGNTVATQTYQYFQTFTIIAVIYFVLT 489 >gi|152974370|ref|YP_001373887.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023122|gb|ABS20892.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cytotoxicus NVH 391-98] Length = 214 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 75/199 (37%), Positives = 115/199 (57%), Gaps = 2/199 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L ++VTL IA IS +S +IG + +R + I+S I V I R PLL+ +F Sbjct: 15 LLKGLLVTLEIAIISIFLSFLIGSIVGTVR-YTKIPILSQIFAVIVEIIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A A GL+ QT+ Sbjct: 74 TYFALPEAGLKLEIKTAAIVALTIFEAAMISEIVRSGLLSIEKGQIEAGRASGLSYIQTL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI-IYCEL 195 +IILPQ + PL S+FIS+LK TS+A I++PE+ AQ I +I + + Sbjct: 134 WYIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQIINGQNVNYMIPTFVLV 193 Query: 196 AFVYLILTSFCYIIQIKIE 214 A +Y ++ I+ K+E Sbjct: 194 ACIYFVVNYQLSILSRKLE 212 >gi|332638968|ref|ZP_08417831.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Weissella cibaria KACC 11862] Length = 487 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 63/184 (34%), Positives = 114/184 (61%), Gaps = 9/184 (4%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIFYG 80 T+ +A I +++G +A++++ + + + F Y+ RG PLL+Q+F++++G Sbjct: 287 TVGLAVIGVFFGIVLGILLALMKL----SSVKPLKWFAVAYIEAVRGVPLLIQVFIVYFG 342 Query: 81 LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 IG+ SF+A I++ LN +AY++EIIRS I ++P GQ +A+ ++G T+ QT+R+++ Sbjct: 343 TQVIGLNVSSFMAGAIAMFLNSAAYVAEIIRSGIQAVPAGQTEAARSLGFTKMQTMRYMV 402 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVSTTYQPLIIYCELAFVY 199 LPQ I L +EF++++K SV S I + E+ FQT+ + +++P I A +Y Sbjct: 403 LPQAIKNILPALGNEFVTVIKEGSVVSVIGVGELTFQTS-VVQGASFKPFIPLIISAAIY 461 Query: 200 LILT 203 ILT Sbjct: 462 FILT 465 >gi|295398548|ref|ZP_06808581.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] gi|294973212|gb|EFG49006.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] Length = 230 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 72/208 (34%), Positives = 122/208 (58%), Gaps = 11/208 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++W N+ Q L + VTL + + + SLI+G V+R F I+S + + Sbjct: 7 FQWMNI------QFLLDGLWVTLQVTFYAIIFSLILGGIFGVVR-FMGIPILSKALGLVI 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++ LP +GI + F A + +LT+ SA ISEIIR + +IPKGQ Sbjct: 60 DIIRNLPLLLIIFFTYFALPQLGIRLNIFWAAVGALTIFESAMISEIIRGGLNAIPKGQA 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A + GLTR QT+ +I+LPQ + + A + S+ I+++K TS+A+ I++PE+ A+ I Sbjct: 120 EAGLSTGLTRVQTLIYILLPQAVRSMAPSIVSQLIALIKDTSLATIISLPELTHNAKIIY 179 Query: 183 STTYQPLI-IYCELAFVYLILTSFCYII 209 + +I ++ + F+Y ++ CYI+ Sbjct: 180 NQNTAYVIPMFVIMTFLYWLV---CYIL 204 >gi|260891036|ref|ZP_05902299.1| polar amino acid uptake family ABC transporter, permease protein [Leptotrichia hofstadii F0254] gi|260859063|gb|EEX73563.1| polar amino acid uptake family ABC transporter, permease protein [Leptotrichia hofstadii F0254] Length = 237 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 74/220 (33%), Positives = 128/220 (58%), Gaps = 19/220 (8%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W ++ + P++L A+ +TL IA ++ + SLI+ FFIA++RI +++ + YV Sbjct: 9 NW-GFMVRAIPEIL-KALPMTLNIAIVTMIFSLILSFFIALVRIN-KIPVLTRLATIYVS 65 Query: 64 IFRGTPLLVQLFVIFYGLPHI--------GIVFD-----SFVAIIISLTLNFSAYISEII 110 RGTPLLVQ+++ +YGLP I G D + V + ++ LN S Y+SE Sbjct: 66 FIRGTPLLVQIYLAYYGLPKILDYIHLKYGFNIDVNNIPAIVFVYVAFILNVSGYLSETF 125 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R++I S+ KGQ +A+ +IG+T+ Q +R I+LPQ I + + FIS++K +S+A T++ Sbjct: 126 RAAIQSVDKGQVEAALSIGMTKWQAMRRIVLPQAIIITFPNFGNTFISLIKDSSLAFTVS 185 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 I E+ A+ I ++ Y +A +Y ++ C I++ Sbjct: 186 IVEMMGKAKIISASGLDIFEAYIVVAGIYWVV---CIIVE 222 >gi|260459413|ref|ZP_05807668.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259034967|gb|EEW36223.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 239 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 73/205 (35%), Positives = 111/205 (54%), Gaps = 13/205 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D + + IVVT+ +A + I L IGFFIA+ + + + L + Y +FRG P Sbjct: 15 DGWSDDIAYGIVVTVLLALATLPIGLTIGFFIALGKQS-EEPSLRLAANIYTTVFRGLPE 73 Query: 71 LVQLFVIFYGLP------------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 LV LF+ F+G+P I +SFVA +I L+L FS+Y SE+ S+ +IP Sbjct: 74 LVTLFLFFFGVPILLQHLIRYFRPEATIDVNSFVAGMIVLSLIFSSYASEVFLSAFRAIP 133 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ++ YAIGL+ QT+R +ILPQ + + L + ++S+LK TS+ S + + E + A Sbjct: 134 KGQYEGGYAIGLSYGQTMRKVILPQLLRIAFPGLENCWLSLLKDTSLVSVVGLAETLRNA 193 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT 203 T + Y A V+L L Sbjct: 194 GVAARVTKHSFLFYGVAALVFLGLA 218 >gi|289577747|ref|YP_003476374.1| polar amino acid ABC transporter inner membrane subunit [Thermoanaerobacter italicus Ab9] gi|297544041|ref|YP_003676343.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289527460|gb|ADD01812.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter italicus Ab9] gi|296841816|gb|ADH60332.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 220 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 62/176 (35%), Positives = 108/176 (61%), Gaps = 1/176 (0%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + L + +++TL + ++ I +I+G +A+I++ S IS + YV I RGTPLL Sbjct: 10 KYSHLFVSGLLMTLKLTFLAVTIGVILGLIVALIKMS-SIKPISFVGASYVEIIRGTPLL 68 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 VQL +I+ GL GI +F+A + +L +N +AY++EIIR+ I ++ GQ +A+ ++G+T Sbjct: 69 VQLLLIYNGLMQFGIDIPAFIAGVSALAINSAAYVAEIIRAGIQAVDPGQNEAARSLGMT 128 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +R++I+PQ I L +EFI +LK +++ S I ++ + A I S TY+ Sbjct: 129 HTMAMRYVIIPQAIKNILPALGNEFIVMLKESAIVSVIGFADLTRQADIIQSVTYK 184 >gi|283784570|ref|YP_003364435.1| glutamine ABC transporter permease [Citrobacter rodentium ICC168] gi|282948024|emb|CBG87588.1| glutamine ABC transporter, permease protein [Citrobacter rodentium ICC168] Length = 219 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 124/219 (56%), Gaps = 5/219 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P LL A +TL I+ + ++IG + R + I + + Sbjct: 1 MQFDW-SAIWPAIPILLQGA-KMTLWISILGLAGGIVIGLLAGLARTY-GGWIANHVALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ I RGTP++VQ+ I++ LP + D+F A +I++ +N AYI+EI R S++SI Sbjct: 58 FIEIIRGTPIVVQVMYIYFALPMAFPDLRIDTFSAAVITIMINSGAYIAEITRGSVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R++TIRH+I+P + L ++ I +K TS+ I E+ ++ Sbjct: 118 KGFSEAGLALGLSRRETIRHVIMPLALRRMLPSLGNQLIISIKDTSLFIVIGAAELTRSG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 Q I++ ++ L I+ + VYLI+T I+ +E + Sbjct: 178 QEIIAGNFRALEIWTAVGVVYLIITQVLNIVLRSLERRM 216 >gi|330812667|ref|YP_004357129.1| ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380775|gb|AEA72125.1| putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 260 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 76/218 (34%), Positives = 126/218 (57%), Gaps = 10/218 (4%) Query: 6 FNLIIDSFPQLL---------YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 F++I+D P LL V+TL + S V S ++GF A+ R+ S + Sbjct: 33 FSIILDKLPNLLGMHLAPNGFLQGAVLTLFLCLCSIVASSLLGFITALARLS-SSAVAFG 91 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I FY FRGTPLL+Q+ +I+ GLP +G+V + A II+L+LN+ AY+SEI R+ I+ Sbjct: 92 IASFYASFFRGTPLLIQILLIYLGLPQLGVVPGAIAAGIIALSLNYGAYLSEIFRAGILG 151 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P GQ +AS A+GL+ + LPQ + T P +++FIS+LK +S+ S + + E+ Sbjct: 152 VPNGQREASLALGLSETVIFWRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMF 211 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 AQ ++Y+ + + A +Y +++ +IQ ++E Sbjct: 212 LAQSYGRSSYRYIEMLTTAAIIYWLMSIALELIQARME 249 >gi|209809241|ref|YP_002264779.1| binding-protein-dependent transport system inner membrane component [Aliivibrio salmonicida LFI1238] gi|208010803|emb|CAQ81200.1| binding-protein-dependent transport system inner membrane component [Aliivibrio salmonicida LFI1238] Length = 264 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 63/193 (32%), Positives = 123/193 (63%), Gaps = 6/193 (3%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL-IMHFYVWIFRGTPLL 71 FP L ++VTL I+ +S + + +I A++R+ SD+++ + Y+ + R TPLL Sbjct: 58 FPAELIEGLLVTLQISGLSAIATFLIALITALLRL--SDSVVGRSLAKGYIELIRNTPLL 115 Query: 72 VQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 VQ++++++ P++G+ + F I++L L AY +EI+RS ++++PKGQ++A ++GL Sbjct: 116 VQIYLLYFVFGPYLGL--ERFSTAILALALFQGAYTAEILRSGLVNLPKGQFEACRSLGL 173 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + + R+IILPQ I + L++E +S++K++S+ S + I ++ + IV+ T P Sbjct: 174 SSFNSYRYIILPQVIQKTLPSLTNELVSLVKNSSIVSVMAIFDLTTEGRNIVADTAMPFE 233 Query: 191 IYCELAFVYLILT 203 I+ +A +YL++T Sbjct: 234 IWFSVAAIYLLVT 246 >gi|194016403|ref|ZP_03055017.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus ATCC 7061] gi|194011876|gb|EDW21444.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus ATCC 7061] Length = 225 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 111/186 (59%), Gaps = 4/186 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +F +IDS + +++TL + IS I + IG F A+++I + I + Y++ Sbjct: 11 HFFQTLIDS-RGIFLEGMLLTLQLTVISIFIGMFIGLFFALLKIS-RVAVFGYIANAYIF 68 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPL+VQ+F++++GL + I F A I+L + AYI+EI R +I SI +GQ + Sbjct: 69 LVRGTPLIVQIFILYFGLTELNI--PDFWAASIALAFHNGAYIAEIFRGAIQSIDQGQKE 126 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A ++G+ R T+R IILPQ + + PL ++FI LK +S+A+ I++ E+F A S Sbjct: 127 AGRSLGMGRFLTMRRIILPQAMRRALPPLGNQFIIGLKDSSLAAFISVNELFNVATTQGS 186 Query: 184 TTYQPL 189 ++ + Sbjct: 187 NSFDNM 192 >gi|332637801|ref|ZP_08416664.1| amino acid ABC transporter permease [Weissella cibaria KACC 11862] Length = 218 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 117/202 (57%), Gaps = 8/202 (3%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W N+ + L + VT+ +A +S ++S IIG + VIR + +S I+ F + Sbjct: 8 FSWINI------RFLLMGLWVTIEVAVVSVILSFIIGSLLGVIR-YVKIPYLSRIVGFII 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + R PLL+ +F ++ LP IGI + I +LT+ SA ++E+IRS I+++PKGQ Sbjct: 61 DVIRNLPLLLIIFFTYFALPKIGIHLGVMTSTIFALTIFESAMLAEVIRSGIVAVPKGQL 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + GL+ KQ + HIILPQ P+ S+F+S++K TS+A+ I +PE+ AQ I Sbjct: 121 EGALSNGLSFKQALWHIILPQAYKKMIPPIVSQFVSLIKDTSLATIIMLPEVTYRAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLILT 203 + ++ ++ LA +Y L Sbjct: 181 AQEPNAIVAMFFALAVLYFALN 202 >gi|298290885|ref|YP_003692824.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296927396|gb|ADH88205.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 249 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 67/222 (30%), Positives = 119/222 (53%), Gaps = 12/222 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D + + VTL + +S + ++ +A+ R+ +S + Y + FRGT Sbjct: 25 LMDRYGLRFLDGVWVTLKLVGLSVFLGALLSLPLAIARVE-GGKFLSRLSFGYSYFFRGT 83 Query: 69 PLLVQLFVIFYG-------LPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLL Q F+++YG L IG+ + D+F + + TLN +AY SEI+R I S+P Sbjct: 84 PLLAQTFLVYYGAGQFREQLTDIGLWWFFRDAFNCAVFTFTLNTAAYQSEILRGGIQSLP 143 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +A+ ++GL+R R +ILPQ I PL +E I ++KS+++AS IT+ ++ Sbjct: 144 AGQMEAAQSLGLSRFLAYRKVILPQAIAIGLRPLGNELILMIKSSAIASVITVYDLMGVT 203 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + S +Y + +Y A +YL++ + +E + +H Sbjct: 204 RLAFSRSYD-MEVYLWAAVLYLVMVEIVRRVWDVLERRLNRH 244 >gi|322384242|ref|ZP_08057951.1| amino acid ABC transporter permease-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321150890|gb|EFX44316.1| amino acid ABC transporter permease-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 175 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 62/155 (40%), Positives = 93/155 (60%), Gaps = 6/155 (3%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 I+ I Y+ RGTPLLVQL++I++ LP GI V+ I +LTLN +AY++EI R Sbjct: 7 KIVKGIAAAYIEFLRGTPLLVQLYIIYFALPQFGISLPGMVSGIAALTLNSAAYVAEIFR 66 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + I SI KGQ +A+ ++G+T ++ II+PQ I L +EFI I+K +S+ S + I Sbjct: 67 AGIESIDKGQMEAARSLGMTHNMAMKLIIIPQAIRNILPALGNEFIVIIKESSIVSIVGI 126 Query: 172 PEIFQTAQRIVSTTY---QPLIIYCELAFVYLILT 203 ++ A + TY +PLI+ A VY I+T Sbjct: 127 TDLMFNADTVRGVTYKAFEPLIVA---AVVYFIMT 158 >gi|260566498|ref|ZP_05836968.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|297248903|ref|ZP_06932617.1| polar amino acid transport system permease [Brucella abortus bv. 5 str. B3196] gi|260156016|gb|EEW91096.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|297174267|gb|EFH33618.1| polar amino acid transport system permease [Brucella abortus bv. 5 str. B3196] Length = 277 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 69/222 (31%), Positives = 125/222 (56%), Gaps = 12/222 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I+++ ++ +++TL + IS VI ++ I R+ S + SL YV+ FRGT Sbjct: 55 LIETYGPRYWSGLLITLKLVAISIVIGALLSLPITAARMSNSRWLRSLAFG-YVYFFRGT 113 Query: 69 PLLVQLFVIFYG-------LPHIGI-VF--DSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLL Q F+I+YG L IG+ VF D++ I++ +LN +AY +EI+R +I S+ Sbjct: 114 PLLAQTFLIYYGFGTFRPFLESIGLWVFFRDAWNCAILAFSLNTAAYQAEILRGAIESVA 173 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQW+ + A+G++++ T +ILPQ + + P +E I ++K +++ + IT+ ++ Sbjct: 174 VGQWEGAAALGISKRVTFWKVILPQALIVALRPYGNEIILMIKGSAIVAIITVLDLMGET 233 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +R S T+ Y A +YL++ I +E +T+H Sbjct: 234 RRAYSRTFD-FQTYLWAAVIYLLMVEILRHIWDALERRLTRH 274 >gi|167766390|ref|ZP_02438443.1| hypothetical protein CLOSS21_00895 [Clostridium sp. SS2/1] gi|167711799|gb|EDS22378.1| hypothetical protein CLOSS21_00895 [Clostridium sp. SS2/1] gi|291560833|emb|CBL39633.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SSC/2] Length = 218 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 117/212 (55%), Gaps = 15/212 (7%) Query: 11 DSFPQ----LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 SFP+ L+ + TL + ++ + LI+G IA R+ II + + F++ I R Sbjct: 5 QSFPEIVKLLIENGLQSTLILFFLTLIFGLILGMIIAKGRMS-KLLIIQMPIRFFLLIMR 63 Query: 67 GTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 GTPL++QL+ ++GL +I G+ D A +I +LN++AY +EI RS I +IPKGQ++A+ Sbjct: 64 GTPLILQLYGFYFGLYYIAGLSLDRMTAAVIGFSLNYAAYFAEIYRSGIQAIPKGQYEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +G R QT IILPQ + L SE ++++K TS+A I + EI+ A ++ + Sbjct: 124 KVLGFNRSQTFFKIILPQVVKIITPSLGSECMTLVKDTSLAHVIGVMEIYVVATNQMARS 183 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +YL++ Y+I I S V Sbjct: 184 R---------GMIYLVVAGIFYLIMNAIVSKV 206 >gi|153940673|ref|YP_001389816.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum F str. Langeland] gi|152936569|gb|ABS42067.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum F str. Langeland] gi|295317903|gb|ADF98280.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum F str. 230613] Length = 211 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 100/165 (60%), Gaps = 5/165 (3%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + +I+ Y WIFRGTPL++QLF ++GLP IGI + A ++ +N+ AY++E R+ Sbjct: 47 LKIILSAYTWIFRGTPLMLQLFFAYFGLPVIGIRLEPLTAAYLTFIINYGAYLAETFRAG 106 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SI KGQ +A+ +G T QT+ II+PQ I P+ +E I+++K +++ + I I + Sbjct: 107 IESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKDSALVAAIGIGD 166 Query: 174 IFQTAQRIVST--TYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 + + A+ +V+ T P I A +YL++T+F II +E Sbjct: 167 MLRAAKEVVTRDFTITPFFI---AAAIYLLITAFLVIIFRTLEKK 208 >gi|157146551|ref|YP_001453871.1| glutamine ABC transporter permease protein [Citrobacter koseri ATCC BAA-895] gi|157083756|gb|ABV13434.1| hypothetical protein CKO_02312 [Citrobacter koseri ATCC BAA-895] Length = 219 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 123/220 (55%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P L+ A +TL I+ + L+IG R F I + + Sbjct: 1 MEFDW-SAIWPAIPLLIEGA-KMTLWISILGLAGGLVIGLLAGFARTF-GGWIANHVALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R +TIRH+ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSRGETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A YLI+T I ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMK 217 >gi|167589674|ref|ZP_02382062.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ubonensis Bu] Length = 216 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 55/158 (34%), Positives = 94/158 (59%), Gaps = 3/158 (1%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEI 109 S T++ Y+ +F+GTPLL+QLF++F+GLP +G+ +VA LT SAY++EI Sbjct: 45 SSTVLRGSAKLYIEVFQGTPLLMQLFIVFFGLPLVGLDVPPWVAATAGLTFFTSAYLAEI 104 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R + ++PKGQW+AS ++ ++ + +RH+ILPQ + P + +K T++ S I Sbjct: 105 WRGCVEAVPKGQWEASASLAMSYIEQLRHVILPQAARIAIAPTVGFGVQAVKDTALVSII 164 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 E+ + I + T++P ++Y +A +Y L CY Sbjct: 165 GFTELTKVGIAISNATFRPFVVYGLVALIYFAL---CY 199 >gi|157694048|ref|YP_001488510.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032] gi|157682806|gb|ABV63950.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus SAFR-032] Length = 225 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 111/186 (59%), Gaps = 4/186 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +F +IDS + +++TL + IS I + IG F A+++I + I + Y++ Sbjct: 11 HFFQTLIDS-RSIFLEGMLLTLQLTVISIFIGMFIGLFFALLKIS-RVAVFGYIANAYIF 68 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPL+VQ+F++++GL + I F A I+L + AYI+EI R +I SI +GQ + Sbjct: 69 LVRGTPLIVQIFILYFGLTELNI--PDFWAASIALAFHNGAYIAEIFRGAIQSIDQGQKE 126 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A ++G+ R T+R IILPQ + + PL ++FI LK +S+A+ I++ E+F A S Sbjct: 127 AGRSLGMGRFLTMRRIILPQAMRRALPPLGNQFIIGLKDSSLAAFISVNELFNVATTQGS 186 Query: 184 TTYQPL 189 ++ + Sbjct: 187 NSFDNM 192 >gi|295398454|ref|ZP_06808493.1| amino acid ABC superfamily ATP binding cassette transporter [Aerococcus viridans ATCC 11563] gi|294973318|gb|EFG49106.1| amino acid ABC superfamily ATP binding cassette transporter [Aerococcus viridans ATCC 11563] Length = 514 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 117/190 (61%), Gaps = 10/190 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + I TL IA +S +I+G F+A++R+ ++ ++ + Y+ RGTPL++Q+ + Sbjct: 312 WDGIKTTLIIAGVSIFFGMILGIFLALMRLT-NNPVLKFLATAYIEFVRGTPLMIQVLFM 370 Query: 78 FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 F G+ I + + A ++S+++N AYI+EIIR I S+ KGQ +A+ ++GL QT+R Sbjct: 371 FLGVGSI-FGWSTMTAGLVSVSMNSGAYIAEIIRGGIQSVDKGQAEAARSLGLGYWQTMR 429 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVSTTYQ---PLIIYC 193 +I PQ++ + L +EFI+++K +S+ STI + E+ FQT + + S TYQ PL I Sbjct: 430 KVIFPQSLRSIWPSLGNEFITLIKESSIVSTIGVAELTFQT-RAVTSITYQAVVPLFISM 488 Query: 194 ELAFVYLILT 203 +Y I+T Sbjct: 489 ---IIYFIMT 495 >gi|170760706|ref|YP_001785786.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A3 str. Loch Maree] gi|169407695|gb|ACA56106.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A3 str. Loch Maree] Length = 211 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 98/158 (62%), Gaps = 5/158 (3%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + +I+ Y WIFRGTPL++QLF ++GLP IGI + A ++ +N+ AY++E R+ Sbjct: 47 LKIILSAYTWIFRGTPLMLQLFFAYFGLPVIGIRLEPLTAAYLTFIINYGAYLAETFRAG 106 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SI KGQ +A+ +G T QT+ II+PQ I P+ +E I+++K +++ + I I + Sbjct: 107 IESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKDSALVAAIGIGD 166 Query: 174 IFQTAQRIVST--TYQPLIIYCELAFVYLILTSFCYII 209 + + A+ +V+ T P I A +YL++T+F II Sbjct: 167 MLRAAKEVVTRDFTITPFFI---AAAIYLLITAFLVII 201 >gi|225860475|ref|YP_002741984.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae Taiwan19F-14] gi|298229959|ref|ZP_06963640.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254588|ref|ZP_06978174.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|225727474|gb|ACO23325.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae Taiwan19F-14] gi|327390862|gb|EGE89202.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA04375] Length = 521 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 106/173 (61%), Gaps = 3/173 (1%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ +++ Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R Sbjct: 338 LVGWVLNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVR 397 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I+++ KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ Sbjct: 398 GGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISV 457 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQHTYS 223 E++ + + + TYQ + +A +Y +LT + I++ IE + TY+ Sbjct: 458 VELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRF-IERRMDMDTYT 509 >gi|15835727|ref|NP_300251.1| ABC amino acid transporter permease [Chlamydophila pneumoniae J138] gi|8978565|dbj|BAA98402.1| ABC amino acid transporter permease [Chlamydophila pneumoniae J138] Length = 217 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 63/192 (32%), Positives = 110/192 (57%), Gaps = 2/192 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 +LL TL ++ I + I+G I V ++F + L+ + YV + RGTPL +Q Sbjct: 9 RLLLRGCGYTLCVSGIGILCGSILGLLIGTVTSLYFPSKLTKLLANSYVTVIRGTPLFIQ 68 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 + +I++GLP + I VA II+L++N +AY++E IR I S+ GQW+++ +G + Sbjct: 69 ILIIYFGLPEVLPIEPTPLVAGIIALSMNSAAYLAENIRGGINSLSIGQWESAMVLGYKK 128 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 Q +II PQ L++EF+S++K +S+ + +PE+ + + IVS P+ +Y Sbjct: 129 YQIFVYIIYPQVFKNILPSLTNEFVSLIKESSILMVVGVPELTKVTKDIVSRELNPMEMY 188 Query: 193 CELAFVYLILTS 204 A +Y ++TS Sbjct: 189 LICAGLYFLMTS 200 >gi|291616827|ref|YP_003519569.1| OccM [Pantoea ananatis LMG 20103] gi|291151857|gb|ADD76441.1| OccM [Pantoea ananatis LMG 20103] Length = 243 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 123/207 (59%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + D+F +L AA+ VTL + SF+ ++ I +R+ I+S Y+ +F Sbjct: 4 FAFLADTFLKL-SAALPVTLGLFISSFLCGGVLAVGILALRMS-RWRILSSFARGYILVF 61 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RG+PL++QLF+I+YGL G++ SFV +++L+L +AY +EI+R ++++ Sbjct: 62 RGSPLMIQLFLIYYGLGQFGVIRHSFVWPFLREPFSCAVLALSLCTAAYTAEILRGALLA 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P GQ +A A G++R +R II P + + S+E I ++KST++AS +T+ ++ Sbjct: 122 VPAGQVEAGMACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTG 181 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 AQ+I+ TY+ + ++ A +YLIL Sbjct: 182 VAQQIIQRTYRTMEVFLCAAAIYLILN 208 >gi|71735739|ref|YP_277029.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|257483717|ref|ZP_05637758.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|298489317|ref|ZP_07007332.1| Arginine transport system permease protein artM [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71556292|gb|AAZ35503.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298156168|gb|EFH97273.1| Arginine transport system permease protein artM [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320331786|gb|EFW87724.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330872637|gb|EGH06786.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] gi|330987162|gb|EGH85265.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] gi|331012130|gb|EGH92186.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 229 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 124/207 (59%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +II P+L A +TL + I+ + LI+ + + R + +L + Y++ F Sbjct: 3 WEVIIKWLPRLAQGA-TLTLELVAIAVIAGLILAIPMGIARASRHWPVRAL-PYAYIFFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+++YGL +V D F ++++TL+ +AYI+EI+R +I + Sbjct: 61 RGTPLLVQLFLVYYGLAQFDVVRQGPLWPYLRDPFWCAVVTMTLHTAAYIAEILRGAIQA 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P G+ +A+ A+G+++ + + +I+LP+ S+E I +LK++++AST+T+ E+ Sbjct: 121 VPVGEVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I++ TY P+ I+ YL++T Sbjct: 181 MARTIIARTYLPVEIFFAAGMFYLVMT 207 >gi|70726105|ref|YP_253019.1| hypothetical protein SH1104 [Staphylococcus haemolyticus JCSC1435] gi|68446829|dbj|BAE04413.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 484 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 69/182 (37%), Positives = 108/182 (59%), Gaps = 4/182 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRI-FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 T+ I+ I V IIG FIA+ ++ F IISL Y+ RGTP+LVQ+F++F+G Sbjct: 287 TIIISLIGVVCGAIIGSFIALAKLSKFK--IISLPATIYIEFLRGTPMLVQVFIVFFGTT 344 Query: 83 HI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + G+ + + I+L +N SAYI+EIIR+ I ++ KGQ +A+ +GL +T+ HIIL Sbjct: 345 ALLGLDISALICGTIALVINSSAYIAEIIRAGINAVDKGQTEAAQCLGLNYSKTMIHIIL 404 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ L +EF++++K +S+ STI + EI AQ + ++ P A +Y + Sbjct: 405 PQAFKNILPALGNEFVTLIKESSIISTIGVGEIMFNAQVVQGISFDPFTPLIIAACMYFV 464 Query: 202 LT 203 LT Sbjct: 465 LT 466 >gi|307244562|ref|ZP_07526667.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM 17678] gi|306492089|gb|EFM64137.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM 17678] Length = 224 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 63/189 (33%), Positives = 115/189 (60%), Gaps = 9/189 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ I+ ++ + I+G V +I + +++ I + Y+ + R TPLLVQ+ ++ YG P Sbjct: 19 VTILISFMALLFGFIVGLVACVCKIS-NKSVLKWIANVYIEVIRDTPLLVQVMIMAYGFP 77 Query: 83 HI-GIVF-------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 I G+ + D+F A ++++ LN AYI+EI+RS I S+ KGQ +AS ++GLT Q Sbjct: 78 MILGVKYPTMFGYDDTFTAAVMAMILNSGAYIAEILRSGISSVDKGQMEASRSLGLTYLQ 137 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 ++R+II+PQ + L++EFIS++K +++ + + + +I A + ++TY Y Sbjct: 138 SMRYIIVPQAVKNILPALANEFISLVKESAIVAFVGVTDIMFVAISVKNSTYNGFGPYLF 197 Query: 195 LAFVYLILT 203 A +Y ++T Sbjct: 198 AALIYFVIT 206 >gi|15900370|ref|NP_344974.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae TIGR4] gi|116516213|ref|YP_815922.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae D39] gi|149023738|ref|ZP_01836218.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP23-BS72] gi|14971923|gb|AAK74614.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae TIGR4] gi|116076789|gb|ABJ54509.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae D39] gi|147929675|gb|EDK80667.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP23-BS72] Length = 521 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 106/173 (61%), Gaps = 3/173 (1%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ +++ Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R Sbjct: 338 LVGWVLNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVR 397 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I+++ KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ Sbjct: 398 GGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISV 457 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQHTYS 223 E++ + + + TYQ + +A +Y +LT + I++ IE + TY+ Sbjct: 458 VELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRF-IERRMDMDTYT 509 >gi|146284417|ref|YP_001174570.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] gi|145572622|gb|ABP81728.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] gi|327482802|gb|AEA86112.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166] Length = 229 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 64/190 (33%), Positives = 113/190 (59%), Gaps = 10/190 (5%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + +S + LI+ + + R + + + Y++ FRGTPLLVQLF+++YG+ Sbjct: 19 LTLQLVGVSVITGLILAVPLGIAR-SSRHLAVRALPYGYIFFFRGTPLLVQLFLVYYGMA 77 Query: 83 HIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 IV D + II++TL+ +AYI+EIIR +I ++P G+ +A+ A+G++R Sbjct: 78 QFDIVRQSALWPYLRDPYWCAIITMTLHTAAYIAEIIRGAIQNVPHGEVEAARALGMSRS 137 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q + HIILP+ S+E I +LK++++ASTIT+ E+ A++I + TY ++ Sbjct: 138 QALLHIILPRATRIGLPAYSNEVILMLKASALASTITLLELTGMARKIAARTYLHEEMFL 197 Query: 194 ELAFVYLILT 203 +YL++ Sbjct: 198 TAGLIYLLIA 207 >gi|325293914|ref|YP_004279778.1| nopaline ABC transporter membrane spanning protein [Agrobacterium sp. H13-3] gi|325061767|gb|ADY65458.1| nopaline ABC transporter membrane spanning protein [Agrobacterium sp. H13-3] Length = 228 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 117/219 (53%), Gaps = 12/219 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 S P LL + T I IS I +G +A++R+ + ++ +Y +FRGTPLL Sbjct: 9 SMPFLL-KGLSTTATITAISVAIGFNLGLGLALMRLS-ENRFLAGFAKYYSMVFRGTPLL 66 Query: 72 VQLFVIFYGLPHIG----------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 VQLF+ +YGL IG ++ D ++++ LN +AY SEI+R ++S+P G Sbjct: 67 VQLFLFYYGLGQIGFIKGNAITWWVISDGARCAVMAMALNTAAYTSEILRGGLLSVPAGL 126 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ A G++ R I P I + +E I ++K TS+ASTIT+ EI A+R+ Sbjct: 127 KEAAKATGMSPFMRFRRIEFPLAIRQALPAYGNELILVVKGTSLASTITVLEITGYAKRL 186 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +S T+ ++ +YL++ ++ +E+ + +H Sbjct: 187 MSQTFAIFEVFALAGAIYLVINLTLVMLIRMLEAHLMRH 225 >gi|300716002|ref|YP_003740805.1| Polar amino acid ABC transporter inner membrane subunit [Erwinia billingiae Eb661] gi|299061838|emb|CAX58954.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia billingiae Eb661] Length = 247 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 72/229 (31%), Positives = 128/229 (55%), Gaps = 11/229 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + D+F +L AA+ VTL + SFV+ ++ I +R+ + ++S Y+ +F Sbjct: 4 FAFLTDTFLKL-AAALPVTLGLFFASFVLGGLLALVILAMRMS-RNPLLSGFARLYILVF 61 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RG+PL++QLF+I+YGL ++ SFV +++L L ++Y +EI R +++ Sbjct: 62 RGSPLMIQLFLIYYGLGQFEVIRHSFVWPVLREPFFCAVVALALCTASYTAEIFRGGLLA 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP GQ +A A G++R +R II P + + S+E I ++KST++AS +T+ ++ Sbjct: 122 IPSGQIEAGMACGMSRWLLLRRIIAPIMLRYALPAYSTEAILLVKSTALASLVTVWDVTG 181 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 AQ+I+ TY+ + ++ A +YLIL I IE ++ V+ Sbjct: 182 VAQQIIQRTYRTMEVFVCAALIYLILNFIIVQIYAWIERRLSPRLRPVE 230 >gi|15890304|ref|NP_355976.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15158505|gb|AAK88761.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 219 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 66/191 (34%), Positives = 110/191 (57%), Gaps = 4/191 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L A+ T+ + I+ V I+GFFIA+ R + ++ + Y+ + +G P+L+ LF+ Sbjct: 14 LLTALQWTVLLTIIALVGGGIVGFFIALARTS-DNKLLRIAAGTYIQVIQGIPVLMILFL 72 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +YGL G+ +A S+T+ S Y++EI R I ++PK QW+AS ++ LTR Q Sbjct: 73 SYYGLSLAGLELPPLIAAGASMTIYTSGYLAEIWRGCIQAVPKQQWEASESLALTRAQQY 132 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 R++ILPQ I S P + ++K+TS+AS I E+ + Q I + T+QP ++ +A Sbjct: 133 RYVILPQAIRISLPPTVGFAVQVVKNTSIASIIGFVELARAGQLINNATFQPFRVFVAVA 192 Query: 197 FVYLILTSFCY 207 +Y I+ CY Sbjct: 193 VLYFIV---CY 200 >gi|78355214|ref|YP_386663.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217619|gb|ABB36968.1| amino acid ABC transporter membrane protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 251 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 114/198 (57%), Gaps = 3/198 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +++D+ P LL+ I +T+ I + V IIG + + RI + + + + YV R Sbjct: 36 EVMLDTAP-LLWDGIELTIIITVLGLVFGFIIGTLVGLGRIS-RNRLCNAVAVSYVEAIR 93 Query: 67 GTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 GTPL+VQ+ +++GLP + GI A ++++ +N AYI+EI+R SI SI GQ +A Sbjct: 94 GTPLIVQVMFLYFGLPLVLGIRIPPVTAGVVAIAVNSGAYIAEIVRGSIQSINTGQMEAG 153 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IGLT QT+ +II PQ PL ++FI LK TS+ I + E+ + Q I++ Sbjct: 154 RSIGLTHLQTMLYIIWPQAFKRMIPPLGNQFIISLKDTSLLVVIGVGELTRQGQEIIAVN 213 Query: 186 YQPLIIYCELAFVYLILT 203 ++ ++ +A +YL +T Sbjct: 214 FRAFEVWLTVAIMYLCMT 231 >gi|308449227|ref|XP_003087895.1| hypothetical protein CRE_07965 [Caenorhabditis remanei] gi|308252035|gb|EFO95987.1| hypothetical protein CRE_07965 [Caenorhabditis remanei] Length = 762 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 122/214 (57%), Gaps = 7/214 (3%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 + L +DS P L + TL I ++F+I++++G ++I S T+ I YV + Sbjct: 549 FIQLFVDSMPAL-GEGLWNTLRITMMAFIIAMVLGLIFGFMKISTSRTLRG-IAAVYVAV 606 Query: 65 FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTP+LV F+ ++GLP + G+ + F A +L LN AY++EI+R + ++ GQ + Sbjct: 607 FRGTPVLVWAFLFYFGLPQLTGVTGNVFWAGTATLALNSGAYLTEIVRGGLQAVDPGQME 666 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++GL ++++ +++PQ + S + ++F+ LK +S+ TI E+ AQ+I + Sbjct: 667 AARSLGLGWGKSMQRVVVPQAVKISTPAIINQFVITLKDSSLLLTIGFAELLYQAQQIYA 726 Query: 184 TTYQP---LIIYCELAFVYL-ILTSFCYIIQIKI 213 Y+ LII + FV + +LT I+ K+ Sbjct: 727 ANYRTTEMLIIVGIMYFVVITLLTCVANIVDRKV 760 >gi|306835974|ref|ZP_07468966.1| amino acid ABC superfamily ATP binding cassette transporter [Corynebacterium accolens ATCC 49726] gi|304568140|gb|EFM43713.1| amino acid ABC superfamily ATP binding cassette transporter [Corynebacterium accolens ATCC 49726] Length = 317 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 127/220 (57%), Gaps = 23/220 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F Q + A + T+ I +S +I +I G +AV+R+ + I+ I ++WIFRGTP+ V Sbjct: 65 FDQRIAIASLHTIAITILSMIIGVIGGAILAVMRMS-PNPILRAISWIFLWIFRGTPIYV 123 Query: 73 QLFVIFYGLP-------HIG--------IVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 QL +F+GL ++G ++ ++F ++ L LN +AY++EI+RS I S+ Sbjct: 124 QL--VFWGLLSAIYQSINLGFAEVSLQSVLTNAFFLAVMGLGLNEAAYMAEIVRSGISSV 181 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP---EI 174 P+GQ +AS A+G++ T+R +LPQ + P +EFIS+LK++S+ + IP EI Sbjct: 182 PEGQKEASKALGMSWWMTMRRTVLPQAMRIIIPPTGNEFISLLKTSSL--VVAIPYTHEI 239 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 F A I + +QP+ + A YL++TS + Q +E Sbjct: 240 FGRATDISAALFQPIPLLMVAASWYLVITSLLMVGQYFLE 279 >gi|225856181|ref|YP_002737692.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae P1031] gi|225725803|gb|ACO21655.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae P1031] Length = 521 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 106/173 (61%), Gaps = 3/173 (1%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ +++ Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R Sbjct: 338 LVGWVLNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVR 397 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I+++ KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ Sbjct: 398 GGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISV 457 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQHTYS 223 E++ + + + TYQ + +A +Y +LT + I++ IE + TY+ Sbjct: 458 VELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRF-IERRMDMDTYT 509 >gi|118587044|ref|ZP_01544475.1| ABC-type amino acid transport system, permease [Oenococcus oeni ATCC BAA-1163] gi|290890987|ref|ZP_06554051.1| hypothetical protein AWRIB429_1441 [Oenococcus oeni AWRIB429] gi|118432565|gb|EAV39300.1| ABC-type amino acid transport system, permease [Oenococcus oeni ATCC BAA-1163] gi|290479386|gb|EFD88046.1| hypothetical protein AWRIB429_1441 [Oenococcus oeni AWRIB429] Length = 231 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 70/204 (34%), Positives = 115/204 (56%), Gaps = 13/204 (6%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F L + I VTL I+ + V+ IIG FIA++ + ++++I YV I RGTPL+ Sbjct: 12 KFRSELISGIEVTLLISICAVVLGSIIGLFIAIMHMS-KKRVVNVIATTYVEILRGTPLI 70 Query: 72 VQLFVIFYGLP------------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 VQL ++Y +P I I + A II++ +N SAY+SE IR+ SI K Sbjct: 71 VQLMFVYYAVPLILQAILSNFGSSIEINIPTIPAGIIAVAINSSAYVSEAIRAGFNSIDK 130 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ ++GL +K T+R++I+PQ + L +EF++++K +S+ I P+I Sbjct: 131 GQTEAARSLGLPKKLTMRYVIIPQALKNIWPALGNEFVALIKESSIVLVIGTPDIMYQIN 190 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I + T++P+ A +Y +LT Sbjct: 191 NIRAVTFEPVAPLILSAVIYFVLT 214 >gi|260462071|ref|ZP_05810316.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259032318|gb|EEW33584.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 224 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 73/197 (37%), Positives = 113/197 (57%), Gaps = 7/197 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++I S P LL + TL + +S I + IG I+++R++ + L + Y IFR Sbjct: 11 DVIASSLPALLRG-FLNTLLLGILSIGIGIPIGLVISLLRLYAPKPLRWLAVG-YTDIFR 68 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P+LV L +I+Y LP +GI S+ + + + + SAY +E+ RS I SIP+GQ++AS Sbjct: 69 ALPVLVVLILIYYALPFLGIRLSSWASAVTAFAIIMSAYSAEVFRSGIESIPRGQFEASQ 128 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--T 184 A+GL T+R ++LPQ I P++S +S+ K TS+AST+ +PE+ + A S Sbjct: 129 ALGLPFLLTLRKVVLPQAIRVVIPPMTSNCVSMFKDTSLASTVALPELLKEATNAQSLYA 188 Query: 185 TYQPLIIYCELAFVYLI 201 PLI A VYLI Sbjct: 189 NPSPLI---GAALVYLI 202 >gi|302521884|ref|ZP_07274226.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. SPB78] gi|302430779|gb|EFL02595.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. SPB78] Length = 322 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 124/219 (56%), Gaps = 22/219 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + + T+ + ++ VI + G +AV+R+ + + S I FY+W FRGTP+LV Sbjct: 75 FDDRILSGLGKTMLLTVVAMVIGIAGGVVLAVMRLS-KNPVTSSIAWFYIWFFRGTPVLV 133 Query: 73 QLFVIFYGLPHIGIVFD-------------SFV----AIIISLTLNFSAYISEIIRSSII 115 QL V F ++G+VF+ SF+ ++ L LN +AY++EI R+ ++ Sbjct: 134 QLMVWF----NLGLVFEYINLGPLYKDYWSSFMTPLLTALLGLGLNEAAYMAEICRAGLL 189 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ +GQ +A++A+G++ + +R I++PQ + P +E I++LK+TS+ + + PE+ Sbjct: 190 AVDEGQTEAAHALGMSHAKALRRIVIPQAMRVIVPPTGNEVINMLKTTSLVAAVQYPELL 249 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + AQ I + P+ + A YLILTS I Q IE Sbjct: 250 RAAQDIGQVSGAPVEMLFLAAAWYLILTSVLSIGQFYIE 288 >gi|261404397|ref|YP_003240638.1| polar amino acid ABC transporter inner membrane subunit [Paenibacillus sp. Y412MC10] gi|329929716|ref|ZP_08283402.1| putative glutamine ABC transporter, permease protein GlnP [Paenibacillus sp. HGF5] gi|261280860|gb|ACX62831.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. Y412MC10] gi|328935933|gb|EGG32392.1| putative glutamine ABC transporter, permease protein GlnP [Paenibacillus sp. HGF5] Length = 216 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 120/216 (55%), Gaps = 12/216 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W NL + L +T+ +A +S + S IIG + +R + +S F V Sbjct: 7 YSWPNL------RYLLQGFWITVQVAGLSIIFSFIIGTVLGTVR-YTKTPFLSRTTAFLV 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F I LP GI +F A ++ L++ A I+EI+RS ++S+ KGQ Sbjct: 60 DIIRNLPLLLIIFFIGMVLPQTGIRIPTFWAAVVGLSIFEGAMIAEIVRSGLVSVDKGQI 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A GL+ QT+RH+ILP + + P+ S+FIS++K TS+A I++PE+ + Q + Sbjct: 120 EAARASGLSYMQTLRHVILPLALRRMSPPMVSQFISLIKDTSLAVIISLPELMRNVQILS 179 Query: 183 STTYQ---PLIIYCELAFVYLILTSFCYIIQIKIES 215 ++Y P +++ L +Y L II ++E+ Sbjct: 180 GSSYSYVIPALVFASL--LYFTLNYLLSIIAKRLEA 213 >gi|55378502|ref|YP_136352.1| amino acid ABC transporter permease [Haloarcula marismortui ATCC 43049] gi|55231227|gb|AAV46646.1| amino acid ABC transporter permease protein [Haloarcula marismortui ATCC 43049] Length = 326 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 114/201 (56%), Gaps = 17/201 (8%) Query: 33 VISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-------- 80 ++ + +GFFIAV R++ SL + Y +FRGTPLL QLFV+++ Sbjct: 117 LLGIALGFFIAVPLSVARVYGGTLTRSLALG-YTELFRGTPLLAQLFVLYFATPLTTIIR 175 Query: 81 -LPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 LP +G F +F +I+ TLN +AY SE IRS++ S+P+GQ A+ +IGL++ I Sbjct: 176 ELPTVGAGFIPAQAFWVAVIAFTLNSAAYQSEYIRSALNSVPEGQLTAARSIGLSKVDGI 235 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 RH++LPQ + + S+E + ++K +S+AS IT+ E+F+ I S TY+ ++ Sbjct: 236 RHVVLPQGLRYAIPGWSNELVYLIKYSSLASFITVRELFERTDAIASETYRYTELFVLAG 295 Query: 197 FVYLILTSFCYIIQIKIESSV 217 +YL L ++ +E V Sbjct: 296 LLYLALVISASLVMEYVEDRV 316 >gi|327393252|dbj|BAK10674.1| octopine transport system permease protein OccM [Pantoea ananatis AJ13355] Length = 280 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 123/207 (59%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + D+F +L AA+ VTL + SF+ ++ I +R+ I+S Y+ +F Sbjct: 41 FAFLADTFLKL-SAALPVTLGLFISSFLCGGVLAVGILALRMS-RWGILSSFARGYILVF 98 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RG+PL++QLF+I+YGL G++ SFV +++L+L +AY +EI+R ++++ Sbjct: 99 RGSPLMIQLFLIYYGLGQFGVIRHSFVWPFLREPFSCAVLALSLCTAAYTAEILRGALLA 158 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P GQ +A A G++R +R II P + + S+E I ++KST++AS +T+ ++ Sbjct: 159 VPAGQVEAGMACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTG 218 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 AQ+I+ TY+ + ++ A +YLIL Sbjct: 219 VAQQIIQRTYRTMEVFLCAAAIYLILN 245 >gi|26987022|ref|NP_742447.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida KT2440] gi|24981641|gb|AAN65911.1|AE016219_4 amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] Length = 229 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 122/207 (58%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +I P+L A +TL + I+ V LI+ + + R + + Y++ F Sbjct: 3 WEVIFKWLPRLAEGA-TLTLELVAIAVVAGLILAIPLGIARSS-RHWYVRAVPFSYIFFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+++YGL V D F ++++TL+ +AYI+EI+R ++ + Sbjct: 61 RGTPLLVQLFLVYYGLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQA 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKG+ +A+ A+G++R +T+ +I+LP+ S+E I +LK++++AST+T+ E+ Sbjct: 121 IPKGEIEAARALGMSRGKTLFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I++ TY P+ I+ YL+++ Sbjct: 181 MARTIIARTYLPVEIFFAAGVFYLVIS 207 >gi|170695842|ref|ZP_02886983.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170139266|gb|EDT07453.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 220 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 110/202 (54%), Gaps = 11/202 (5%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q + A + TL VI ++IGF IAV+++F + +L + Y+ +FRGTP LVQL Sbjct: 14 QPIAAGLATTLGTWAAGVVIGMLIGFVIAVLQLFCGRWVRAL-LRVYIELFRGTPFLVQL 72 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F+++YG P G+ + A ++ L L SAY +E RS S+P G +A+ +GLTR Q Sbjct: 73 FLLYYGGPSFGLTLEPMTAGVLGLGLYGSAYFAEAFRSGFESVPPGHLEAASCLGLTRMQ 132 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + I +PQ + L++ I + K T+V S +T+PE+ I S T+ Sbjct: 133 AVLRIQMPQMLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATF-------- 184 Query: 195 LAFVY-LILTSFCYIIQIKIES 215 AFV L++ CY+ +++ S Sbjct: 185 -AFVETLLMLCVCYLALVELTS 205 >gi|27379091|ref|NP_770620.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27352241|dbj|BAC49245.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 219 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 8/192 (4%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHFYVWIFRGTPLL 71 QL+ AIV TL + I+ + L+IG AV RI T + ++ Y+ +FR TP L Sbjct: 12 QLIDGAIV-TLELTVIAALAGLVIGVAGAVALNGRI----TPLRWLVRGYIELFRNTPSL 66 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +Q+F++F+ LP+ G+ +F A ++L+L F AY EIIR+ + S+PK Q +A +GL+ Sbjct: 67 IQIFIVFFVLPNFGLKLPAFEAAAVALSLYFGAYSVEIIRAGLDSVPKNQIEAGQCLGLS 126 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 Q RHI+LP + + ++S+F+ +L TS+AS + E+F A I S TY+ + Sbjct: 127 GWQVFRHILLPPALRNAYPAVTSQFVLLLLGTSLASQVAADELFHVAGFIESRTYRSFEV 186 Query: 192 YCELAFVYLILT 203 Y + VY + Sbjct: 187 YAVICAVYFAMA 198 >gi|313125640|ref|YP_004035910.1| amino acid ABC transporter membrane protein, paat family [Halogeometricum borinquense DSM 11551] gi|312292005|gb|ADQ66465.1| amino acid ABC transporter membrane protein, PAAT family [Halogeometricum borinquense DSM 11551] Length = 277 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 117/203 (57%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F L+ PQ + A I+V L + + ++S+ G F+ + R+ + ++ S I Y+ F Sbjct: 56 FELMQTVLPQFVDAYILV-LKVVVLGSILSVSAGIFVGLARVSKT-SLTSGIAQSYIQFF 113 Query: 66 RGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLL Q+FVI++G+P + I F II+LTLN +AY+ E +R I S+P+G Sbjct: 114 RGTPLLFQIFVIYFGIPALWPGTFPIQDWEFPTAIIALTLNHAAYVGEAVRGGINSVPEG 173 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++G++ Q++R +ILPQ + + ++ + ++K TS+ + I +PE+ Q + Sbjct: 174 QMEAARSLGMSYIQSMREVILPQAWRNALAAIGNDQVILVKDTSLMTVIALPELIQQFRD 233 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S + P +A YL +T Sbjct: 234 VNSAVFDPWTPLVIVAIAYLSIT 256 >gi|160895677|ref|YP_001561259.1| polar amino acid ABC transporter inner membrane protein [Delftia acidovorans SPH-1] gi|160361261|gb|ABX32874.1| polar amino acid ABC transporter, inner membrane subunit [Delftia acidovorans SPH-1] Length = 217 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 1/171 (0%) Query: 32 FVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF 91 FV+ G + R+ S + L Y+ F+ TPLL+Q+F++F+G G+ + Sbjct: 29 FVLGGATGLLVLFARVGRSQNLRRLA-KAYIQAFQNTPLLMQMFIVFFGSSMAGLDISPW 87 Query: 92 VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP 151 A I LTL SAY++E+ R + SIP GQW+AS ++ + Q +RH++LPQ + S P Sbjct: 88 TAAAIGLTLYTSAYLAEVWRGCVESIPSGQWEASSSLAMGYLQQMRHVVLPQALRLSIAP 147 Query: 152 LSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + I+K T+VAS I E+ + + + T+QP +IY +A Y +L Sbjct: 148 TVGFSVQIIKGTAVASIIGFSELTKLGSMLANATFQPFLIYGLVAAGYFLL 198 >gi|313890158|ref|ZP_07823793.1| putative arginine ABC transporter, permease protein ArtQ [Streptococcus pseudoporcinus SPIN 20026] gi|313121519|gb|EFR44623.1| putative arginine ABC transporter, permease protein ArtQ [Streptococcus pseudoporcinus SPIN 20026] Length = 213 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 118/211 (55%), Gaps = 9/211 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRG 67 I+ P LL A VTL + I ++S+ +G +A ++++ F + ++ YVWI RG Sbjct: 4 ILQVLPSLLDGA-KVTLQVFFIVIMLSIPLGALLAFLMKLPFKP--LQWLLTLYVWIMRG 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL +Y LP +GI FD A I++ T+N++AY +EI R I +IPKGQ++A+ Sbjct: 61 TPLLLQLIFFYYVLPSVGITFDRMPAAILAFTMNYAAYFAEIFRGGIEAIPKGQYEAAKV 120 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TT 185 + L QTIR+IILPQ + +E I+++K +S+ + + ++ ++ + T Sbjct: 121 LRLNHLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKTAANRDAT 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 P+ I +YL+L I+ IE Sbjct: 181 LAPMFI---AGMIYLLLIGLVTILSRHIEKK 208 >gi|146307936|ref|YP_001188401.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina ymp] gi|145576137|gb|ABP85669.1| L-arginine ABC transporter membrane protein / L-ornithine ABC transporter membrane protein [Pseudomonas mendocina ymp] Length = 232 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 118/207 (57%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +I ++ P L ++ ++VTL I IS + L + +A++R+ S +++ Y ++ Sbjct: 5 YQMIWENLP-LYFSGVLVTLKILLISLAVGLSLALPLALMRVSKSP-LVNFPAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL ++ DSF+ ++ +N SAY +EI+ S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFDVIRDSFMWPYFSSATFCACLAFAINTSAYTAEILAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G++R + R I+LP + + S+E I +L +TS+AS +T+ +I Sbjct: 123 TPHGEIEAAKAMGMSRAKLYRRILLPSALRRALPQYSNEVIMMLHTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + S Y P + YL+LT Sbjct: 183 AARTVSSQYYMPFEAFITAGLFYLVLT 209 >gi|253681319|ref|ZP_04862117.1| amino acid ABC transporter, permease protein [Clostridium botulinum D str. 1873] gi|253562557|gb|EES92008.1| amino acid ABC transporter, permease protein [Clostridium botulinum D str. 1873] Length = 235 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 64/195 (32%), Positives = 112/195 (57%), Gaps = 15/195 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +T+ ++ I+ ++S I G +A++++ I+ +I ++ I RGTPLLVQ+++ +YG+P Sbjct: 24 ITIILSLITVLLSSIFGTVVALMKLS-KIKILKVISTVFIEIVRGTPLLVQVYIFYYGIP 82 Query: 83 HI--------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 + G F I+I+L LN +AY++EIIR I SI KGQ +A+ ++ Sbjct: 83 EVLEKLGIYLPQVDIMGNDFTGLFMIVITLALNSTAYVAEIIRGGIESINKGQMEAARSL 142 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT+ +R++I+PQ I L +EFI+++K +S+ S + I E+ A+ T + Sbjct: 143 GLTQSMAMRYVIIPQAIKNILPALGNEFITVIKESSIVSVVGIKELMFNAKTASGATLKV 202 Query: 189 LIIYCELAFVYLILT 203 Y A +Y +LT Sbjct: 203 FTPYLAAAAIYFVLT 217 >gi|47094446|ref|ZP_00232127.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria monocytogenes str. 4b H7858] gi|47017175|gb|EAL08027.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria monocytogenes str. 4b H7858] Length = 395 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++T+ +A I + I+G +A++++ + + Y+ RGTPLL+Q+F++F+ Sbjct: 195 GTLITIALAAIGVLCGAILGSLLALMKLAKT-RWLRWPAACYIEFVRGTPLLIQIFIVFF 253 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G IG+ +FV+ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+T+ ++R+I Sbjct: 254 GTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYI 313 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L +EF++++K +S+ S I + E+ + +++P I + +Y Sbjct: 314 ILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIY 373 Query: 200 LILT 203 +LT Sbjct: 374 FVLT 377 >gi|315281521|ref|ZP_07870132.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria marthii FSL S4-120] gi|313614833|gb|EFR88366.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria marthii FSL S4-120] Length = 480 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 125/217 (57%), Gaps = 3/217 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 + +I S+P LL A + +T+ +A +S +I+ IIG +++ ++ I+ I YV I Sbjct: 266 FMGIIKSSWPALL-AGMWLTIRLAVVSLIIAFIIGITFGFMKVS-NNKILRGIATVYVDI 323 Query: 65 FRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTPL+VQ F ++G+P + F+A +I+L+LN AY+ EI+R I S+ KGQ + Sbjct: 324 FRGTPLIVQAFFFYFGIPAALDFRMPVFLAGVIALSLNAGAYMVEIVRGGIQSVDKGQME 383 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++GL K+ + ++LPQ I ++F+ LK TS+ S I + E+ Q+ + I++ Sbjct: 384 AARSLGLPYKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQSGKIIMA 443 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T++ + + +YLI+ + + ++E + Sbjct: 444 RTFESTWTWLIIGIMYLIVITILTKVSDRLERRLRND 480 >gi|163789522|ref|ZP_02183960.1| glutamine ABC transporter, permease/substrate-binding protein [Carnobacterium sp. AT7] gi|159875054|gb|EDP69120.1| glutamine ABC transporter, permease/substrate-binding protein [Carnobacterium sp. AT7] Length = 484 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 127/218 (58%), Gaps = 7/218 (3%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +F LI +++ +LL + TL + +SF I+L++G + + S+ ++S I YV Sbjct: 269 NFFTLIQNNYSELL-TGLGRTLVLTLVSFAIALVVGVILGLFSAT-SNNLLSGISTLYVT 326 Query: 64 IFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I RG PL+V F +++ +P + I +++A +I+L+LN SAYISE++R I ++ GQ Sbjct: 327 IMRGIPLIVLAFFVYFSIPQFLNIQLSAYLAGVITLSLNTSAYISELVRGGIQAVAGGQL 386 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ ++GL K ++R I+LPQ I ++F+ LK TS+ S I I E+ QT + I+ Sbjct: 387 EAARSLGLPYKTSMRKIVLPQAIKIMIPSFINQFVITLKDTSILSVIGIVELTQTGKIII 446 Query: 183 STTYQPLIIYCELAFVYL----ILTSFCYIIQIKIESS 216 + TY ++ + +Y+ ILT +++ K+ + Sbjct: 447 ARTYSSGNMWLIIGIMYIVLITILTKLSTVLERKMAND 484 >gi|54302942|ref|YP_132935.1| putative amino acid ABC transporter, permease protein [Photobacterium profundum SS9] gi|46916370|emb|CAG23135.1| putative amino acid ABC transporter, permease protein [Photobacterium profundum SS9] Length = 276 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 124/204 (60%), Gaps = 6/204 (2%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL-IMHF 60 +Y WF + FP L + VTL I+ +S + +L+IG A++R+ SD+I+ + Sbjct: 58 QYLWFIDDGEWFPAELLEGLFVTLKISAVSLIFTLLIGLVTALLRL--SDSIVGRGLARG 115 Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQ++++++ P +G+ + F +++L+L AY +EI R+ + +IPK Sbjct: 116 YIELIRNTPLLVQIYLLYFVFGPVLGL--ERFTTAVLALSLFQGAYTAEIFRAGLNNIPK 173 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A ++GL+ R +ILPQ I PL++E +S++K++S+ S + I ++ + Sbjct: 174 GQFEACSSLGLSAIDGYRFVILPQMIRRILPPLTNETVSLVKNSSIVSIMAIFDLTTEGR 233 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 IV+ T P ++ +A +YL +T Sbjct: 234 NIVADTAMPFEVWFTVAGIYLCVT 257 >gi|298291727|ref|YP_003693666.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296928238|gb|ADH89047.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 220 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 64/184 (34%), Positives = 107/184 (58%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ I+ V + GF +A+ R+ S T+ L+ YV + +GTPLLV +F+ F+GL Sbjct: 20 TIGLSVIALVGGGLAGFLVALGRVSPSRTV-RLLAATYVQLIQGTPLLVIMFLSFFGLAA 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 IG A S+T+ +AY+ EI R I ++P+ QW+A+ + L+R Q + +ILPQ Sbjct: 79 IGFNISPLAAAGASMTIFVAAYLGEIWRGCIEAVPRPQWEAAEGLALSRSQRMVKVILPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I + P + I+K+TS+AS + E+ ++ Q I ++ ++P +IY +A VY Sbjct: 139 AIRIATPPTVGFMVQIIKNTSLASVVGFVELTRSGQIINNSMFEPFLIYSIIAVVYF--- 195 Query: 204 SFCY 207 S CY Sbjct: 196 SLCY 199 >gi|259502421|ref|ZP_05745323.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] gi|259169564|gb|EEW54059.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] Length = 502 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 106/167 (63%), Gaps = 1/167 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I ++ + +IG A++R+ S + S+ + Y+ RGTP+LVQ+ +++G+ Sbjct: 307 TLLITVLAVICGFLIGILFALMRLSSSKLLHSIAI-CYIEFIRGTPMLVQIMFVYFGIGA 365 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 I + VA II++ +N AY++EIIRS I S+P GQ +A+ ++G+T++QT R++I+PQ Sbjct: 366 IIQSMPALVAGIIAVAINSGAYVAEIIRSGIQSLPLGQTEAARSLGMTKRQTFRYVIMPQ 425 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + L +EFI++LK +S+ STI + E+ Q + + TY+ ++ Sbjct: 426 ALKNIWPALGNEFITLLKDSSLVSTIGVTELMYQTQLVQADTYKGVL 472 >gi|258540995|ref|YP_003175494.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc 705] gi|257152671|emb|CAR91643.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus Lc 705] Length = 482 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 108/180 (60%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL A ++ + IIG +A++++ + + ++ + Y+ RGTPLLVQ F++F+G Sbjct: 289 TLVFAVLTVLFGTIIGTLLALMKLS-RNWLAKVVANIYIEFIRGTPLLVQAFIVFFGTQI 347 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ +FVA I++ +N AY++EIIR I S+P GQ +A+ ++GL + Q +R++ILPQ Sbjct: 348 LGLDLSAFVAGAIAMAINSGAYVAEIIRGGINSVPVGQTEAARSLGLHQSQAMRYVILPQ 407 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + L +EF++ +K +SV S I E+ + +++P + +A +Y ++T Sbjct: 408 AMKNIWPALGNEFVTDIKESSVLSVIGATELMFEGTVVQGASFKPFLPLVVVAILYFLMT 467 >gi|241765821|ref|ZP_04763760.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] gi|241364269|gb|EER59431.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] Length = 260 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 83/135 (61%), Gaps = 2/135 (1%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 + FY+W RGTPLLVQ+ +++ LP + G+ F A +++L LN AY +E IR+ + Sbjct: 91 LAGFYIWAIRGTPLLVQILFVYFALPVLVPGLNLPDFAAAVVALGLNVGAYNAEAIRAGL 150 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +++P+GQ +A+ A+GL R ++ PQ S PL S F+++LK +S+A I + E+ Sbjct: 151 LAVPRGQTEAARALGLGRGHVFFDVVFPQAFKISLPPLVSNFVALLKDSSLAYAIGVVEL 210 Query: 175 FQTAQRIVSTTYQPL 189 RI S T+QP+ Sbjct: 211 TNVGNRIQSATFQPI 225 >gi|165977126|ref|YP_001652719.1| putative ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165877227|gb|ABY70275.1| putative ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 219 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 106/179 (59%), Gaps = 2/179 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++++ P+ + AAI+ TL ++ ++SL+ G IA++ + L Y+ + R T Sbjct: 6 VVNAIPRFIDAAII-TLQLSFWGILLSLVFGLLIAIVTAYQVKPFYGL-ARGYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF ++Y LP IGI +D F II+L ++Y++E +R+ ++++PKGQ +A+ AI Sbjct: 64 PLLIQLFFLYYSLPKIGIKWDGFTCGIIALVFLGASYMAEALRAGLLAVPKGQTEAAKAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GL R Q R++I PQ S + + + ++K TSV S + + E+ + I+ Y+ Sbjct: 124 GLNRFQVFRYVIFPQAWAVSIPAIGANVLFLIKETSVISAVAVAELMFVTKDIIGMDYK 182 >gi|315649609|ref|ZP_07902694.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Paenibacillus vortex V453] gi|315275082|gb|EFU38457.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Paenibacillus vortex V453] Length = 217 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 107/185 (57%), Gaps = 12/185 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N ID P LL A + L +A S V+++ + F + R+ I+ + YV IFR Sbjct: 3 NSWIDFLPTLLKGAEITVL-VAFFSAVLAIAMSFAAGLSRLS-KLWIVRTVTAVYVEIFR 60 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GT LLVQLF +++ LP IGI +A I+++ NF AY SEI+RS+++++PKGQW+AS Sbjct: 61 GTSLLVQLFWLYFALPFIGIELPKMLAAILAIGFNFGAYGSEIVRSAVLAVPKGQWEASV 120 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+ + Q + ++ILPQ P ++ + ++KSTS+ IT+ ++ TY Sbjct: 121 ALNMKPWQRMWNVILPQASLRMLPPFGNQLVELIKSTSLVYFITMADL----------TY 170 Query: 187 QPLII 191 Q +++ Sbjct: 171 QAMVL 175 >gi|283954462|ref|ZP_06371982.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 414] gi|283794079|gb|EFC32828.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 414] Length = 247 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 121/204 (59%), Gaps = 15/204 (7%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL----FVI 77 +VTL + + +I +IIGF +A++R F ++LI+ Y+ I RGTP+++QL FVI Sbjct: 53 LVTLLLTACAVIIGVIIGFSLAILR-FSKFKTLNLIIDEYIDIIRGTPVILQLMIFAFVI 111 Query: 78 FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 F D+ A I++L LN SAYI+EI+RS I S+ KGQ +A+ A+GL K +++ Sbjct: 112 F-------TFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMK 164 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL-IIYCELA 196 IILPQ L++EFIS+ K TSV I++ +I +Q + + Y P II+ L Sbjct: 165 EIILPQATKNILPALANEFISLFKETSVVGFISVVDITMQSQSLQAVLYNPKPIIFTGLV 224 Query: 197 FVYLILTSFCYIIQIKIESSVTQH 220 + Y+ + F Y + K+E + ++ Sbjct: 225 Y-YVSVKIFSYFAK-KLELRMNKN 246 >gi|170691132|ref|ZP_02882298.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170144381|gb|EDT12543.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 238 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 109/190 (57%), Gaps = 13/190 (6%) Query: 1 MKYEWFNLI--IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIIS 55 M YEW L ++ F + A +TL + ++FV+S+++G A+ R+ I S Sbjct: 1 MSYEWITLAGYLNDFVR----ASWLTLQVTLLAFVLSMVLGLLTALASASRVRLLRGIAS 56 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + Y+ R TP+L+Q+F++F+GLP +GI +++ A +I+L +N AY++E+ R+ I Sbjct: 57 V----YIEAIRNTPVLLQIFIVFFGLPSLGITLNAYTAGVIALGVNVGAYLAEVFRAGIQ 112 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+P+GQ +A+ +GL R Q ++LPQ + + I +L TS+ S I +PE+ Sbjct: 113 SVPRGQLEAASILGLERSQIFMEVVLPQAARAVYPAIVNNLIQLLLGTSLLSAIALPELS 172 Query: 176 QTAQRIVSTT 185 TA I + T Sbjct: 173 GTATVINART 182 >gi|148988205|ref|ZP_01819668.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP6-BS73] gi|148993994|ref|ZP_01823364.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP9-BS68] gi|148996854|ref|ZP_01824572.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP11-BS70] gi|149006411|ref|ZP_01830123.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP18-BS74] gi|168482691|ref|ZP_02707643.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC1873-00] gi|168488141|ref|ZP_02712340.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP195] gi|168492631|ref|ZP_02716774.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC3059-06] gi|168576830|ref|ZP_02722680.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae MLV-016] gi|169834409|ref|YP_001693956.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae Hungary19A-6] gi|182683418|ref|YP_001835165.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CGSP14] gi|221231314|ref|YP_002510466.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae ATCC 700669] gi|225854025|ref|YP_002735537.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae JJA] gi|303255927|ref|ZP_07341957.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae BS455] gi|303259526|ref|ZP_07345503.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP-BS293] gi|303262389|ref|ZP_07348332.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP14-BS292] gi|303264806|ref|ZP_07350723.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS397] gi|303267362|ref|ZP_07353220.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS457] gi|303269680|ref|ZP_07355436.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS458] gi|307067096|ref|YP_003876062.1| amino acid ABC transporter/signal transduction system periplasmic domain-containing protein [Streptococcus pneumoniae AP200] gi|307126668|ref|YP_003878699.1| amino acid ABC transporter amino acid-binding protein/permeae [Streptococcus pneumoniae 670-6B] gi|147757429|gb|EDK64468.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP11-BS70] gi|147762188|gb|EDK69150.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP18-BS74] gi|147926669|gb|EDK77742.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP6-BS73] gi|147927583|gb|EDK78610.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP9-BS68] gi|168996911|gb|ACA37523.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae Hungary19A-6] gi|172043569|gb|EDT51615.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC1873-00] gi|182628752|gb|ACB89700.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CGSP14] gi|183573209|gb|EDT93737.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP195] gi|183576815|gb|EDT97343.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC3059-06] gi|183577459|gb|EDT97987.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae MLV-016] gi|220673774|emb|CAR68274.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae ATCC 700669] gi|225724181|gb|ACO20034.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae JJA] gi|301801361|emb|CBW34046.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae INV200] gi|302597102|gb|EFL64218.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae BS455] gi|302636488|gb|EFL66980.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP14-BS292] gi|302639460|gb|EFL69918.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP-BS293] gi|302640777|gb|EFL71168.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS458] gi|302643095|gb|EFL73384.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS457] gi|302645673|gb|EFL75903.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS397] gi|306408633|gb|ADM84060.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Streptococcus pneumoniae AP200] gi|306483730|gb|ADM90599.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae 670-6B] gi|332075296|gb|EGI85766.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17570] gi|332076898|gb|EGI87360.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17545] gi|332203623|gb|EGJ17690.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA47368] Length = 521 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 106/173 (61%), Gaps = 3/173 (1%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ +++ Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R Sbjct: 338 LVGWVLNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVR 397 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I+++ KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ Sbjct: 398 GGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISV 457 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQHTYS 223 E++ + + + TYQ + +A +Y +LT + I++ IE + TY+ Sbjct: 458 VELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRF-IERRMDMDTYT 509 >gi|225858303|ref|YP_002739813.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae 70585] gi|225720142|gb|ACO15996.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae 70585] Length = 521 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 54/152 (35%), Positives = 96/152 (63%), Gaps = 1/152 (0%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ +++ Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R Sbjct: 338 LVGWVLNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVR 397 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I+++ KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ Sbjct: 398 GGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISV 457 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E++ + + + TYQ + +A +Y +LT Sbjct: 458 VELYFSGNTVATQTYQYFQTFTIIAVIYFVLT 489 >gi|116248726|ref|YP_764567.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115253376|emb|CAK11764.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 219 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 63/187 (33%), Positives = 107/187 (57%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + + P LL +TL + +++I+G +A+ R +S + F Sbjct: 1 MEWDW-DFVWQIMPTLL-EGFKITLLATILGAAVAMIVGLALAIAR-RSPVAGVSRTVGF 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL+ IFY LP IGI VA +I + ++++ Y +E+ R+ I ++P+G Sbjct: 58 VSEFIRGTPLLVQLYFIFYVLPDIGIRLAPLVAGVIGMGIHYATYTAEVYRAGIENVPRG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A L+ +Q H+ILPQ I L++ FI++ K T + S IT+ E+ A+ Sbjct: 118 QWEAAKATNLSTRQAWIHVILPQAIPPMIPALANYFIAMFKETPLLSAITVLELMNQAKS 177 Query: 181 IVSTTYQ 187 I ++ Y+ Sbjct: 178 IANSNYR 184 >gi|255023362|ref|ZP_05295348.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes FSL J1-208] Length = 255 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 123/216 (56%), Gaps = 3/216 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +I S+P LL + + +T+ +A +S +I+ IIG +++ S I+ I YV IF Sbjct: 42 MGIIKSSWPALL-SGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSK-ILRGIATVYVDIF 99 Query: 66 RGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL+VQ F ++G+P + F+A +I+L+LN AY+ EI+R I S+ KGQ +A Sbjct: 100 RGTPLIVQAFFFYFGIPAALDFRMPVFLAGVIALSLNAGAYMVEIVRGGIQSVDKGQMEA 159 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++GL K+ + ++LPQ I ++F+ LK TS+ S I + E+ Q+ + I++ Sbjct: 160 ARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQSGKIIMAR 219 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T++ + + +YLI+ + I ++E + Sbjct: 220 TFESTWTWLIIGIMYLIVITILTKISDRLERRLRND 255 >gi|239907731|ref|YP_002954472.1| amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239797597|dbj|BAH76586.1| amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 270 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 116/201 (57%), Gaps = 2/201 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I+VT + + ++L+IG + RI + I+L+ YV + RG PLLVQLF I+Y Sbjct: 69 GILVTFQVTVSAIALALVIGLITGLGRIS-RNKYINLVASTYVEVVRGVPLLVQLFYIYY 127 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 L + V D +A +IS+++ + AY+ E+ R+ I +I GQ +A+ ++G TR QT+ ++ Sbjct: 128 ALGRVVHVPD-LLAAVISMSVCYGAYMGEVFRAGITAIAVGQTEAARSLGFTRSQTMYYV 186 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ T P+ +EFI++LK TS+ S + + ++ + + S ++ + +A VY Sbjct: 187 ILPQAWRTILPPVGNEFIALLKDTSLVSILGVADLLRRGREFASESFLYFETFTMVAVVY 246 Query: 200 LILTSFCYIIQIKIESSVTQH 220 LI+T + +E ++ H Sbjct: 247 LIITLILSKLVSFMEERLSHH 267 >gi|150391392|ref|YP_001321441.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus metalliredigens QYMF] gi|149951254|gb|ABR49782.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus metalliredigens QYMF] Length = 227 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 113/204 (55%), Gaps = 2/204 (0%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P+ L + +TL ++ S ++ + G ++++ ++ I Y+ + RGTPLL+Q Sbjct: 21 PKFL-PGVKLTLQLSFFSILLGTVFGLLATMLKMTKIKPLMKAI-DIYISVVRGTPLLLQ 78 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 L IF LP IGI F++ +I L + AYISEI R +I SI GQ +A+ A+G+T+ Sbjct: 79 LIFIFQALPEIGIKLSPFISAVIGLAFHNGAYISEIFRGAIESIDYGQKEAASALGMTKW 138 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q ++ + LPQ S L ++FI +K +S+AS ITI E ++ + T+ P +Y Sbjct: 139 QAMKRVTLPQAFKRSVPSLGNQFIIAIKDSSLASVITITETLMLTRQYTAATFNPWPMYF 198 Query: 194 ELAFVYLILTSFCYIIQIKIESSV 217 Y+I+T+ +KIE+ + Sbjct: 199 IAGSYYMIITTVLSKGLLKIEARL 222 >gi|171319193|ref|ZP_02908312.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171095621|gb|EDT40582.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 297 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 112/204 (54%), Gaps = 14/204 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY---- 79 T+ + ++ + +++G AV+R+ S+ ++ I Y+W+FRGTP+++QL + F Sbjct: 81 TIVMTVLAMTLGIVLGVVTAVMRLS-SNPVLGAIAQGYIWLFRGTPVILQLLLWFNLALV 139 Query: 80 ----GLPHIG-----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 G+P I V F+A ++ L +N AY SE++R+ ++S+ GQ++A+ +IG+ Sbjct: 140 FPTLGIPGIAEYRTVDVMTPFLAAVLGLGINQGAYTSEVVRAGLLSVDTGQYEAAKSIGM 199 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 R Q +R IILPQ + P+ +E I ++K TS+AS + E+ AQ I + + Sbjct: 200 ARLQALRRIILPQAMRVIVPPIGNELIGMVKLTSLASVVQYAEMLHNAQNIYYANARVIE 259 Query: 191 IYCELAFVYLILTSFCYIIQIKIE 214 + YL + + + Q ++E Sbjct: 260 LLIVAGIWYLAVVTVLSLAQARVE 283 >gi|167039130|ref|YP_001662115.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter sp. X514] gi|300913280|ref|ZP_07130597.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter sp. X561] gi|307723706|ref|YP_003903457.1| polar amino acid ABC transporter inner membrane subunit [Thermoanaerobacter sp. X513] gi|166853370|gb|ABY91779.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter sp. X514] gi|300889965|gb|EFK85110.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter sp. X561] gi|307580767|gb|ADN54166.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter sp. X513] Length = 220 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 113/187 (60%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++ +++ + L + +++TL + ++ I +I+G +A+I++ S IS I Sbjct: 1 MSVDFLSMV--KYSHLFVSGLLMTLKLTFLAVTIGVILGLIVALIKMS-SIKPISFIGAS 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV I RGTPLLVQL +I+ GL GI +F A + +L +N +AY++EIIR+ I ++ G Sbjct: 58 YVEIIRGTPLLVQLLLIYNGLMQFGIDIPAFTAGVFALAINSAAYVAEIIRAGIQAVDPG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++G+T +R++I+PQ I L +EFI +LK +++ S I ++ + A Sbjct: 118 QNEAARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIISVIGFADLTRQADI 177 Query: 181 IVSTTYQ 187 I S TY+ Sbjct: 178 IQSITYK 184 >gi|24379609|ref|NP_721564.1| putative amino acid ABC transporter, permease protein [Streptococcus mutans UA159] gi|290580391|ref|YP_003484783.1| putative amino acid ABC transporter permease [Streptococcus mutans NN2025] gi|24377558|gb|AAN58870.1|AE014954_9 putative amino acid ABC transporter, permease protein [Streptococcus mutans UA159] gi|254997290|dbj|BAH87891.1| putative amino acid ABC transporter permease protein [Streptococcus mutans NN2025] Length = 213 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 123/214 (57%), Gaps = 9/214 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRGTP 69 + P LL A++ TL + I + S+ +G +A ++++ F + +++ YVWI RGTP Sbjct: 6 EVLPSLLDGALI-TLQVFFIVILFSIPLGAILAFLMQVPFRP--LRWLLNLYVWIMRGTP 62 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+QL I+Y LP GI FD A I++ TLN++AY +EI R I +IPKGQ++A+ + Sbjct: 63 LLLQLIFIYYVLPSAGITFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLK 122 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTYQ 187 L++ QT+R+IILPQ + + +E I+++K +S+ + + ++ ++ + T Sbjct: 123 LSQIQTVRYIILPQVVKIVLPSVFNEIINLVKDSSLVYVLGVGDLLLASKTAANRDATLA 182 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 P+ I +YLIL I+ +E + + Sbjct: 183 PMFIAGG---IYLILIGVVTILSKYVEKKFSYYK 213 >gi|88856305|ref|ZP_01130964.1| ABC transporter permease protein [marine actinobacterium PHSC20C1] gi|88814389|gb|EAR24252.1| ABC transporter permease protein [marine actinobacterium PHSC20C1] Length = 319 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 110/199 (55%), Gaps = 13/199 (6%) Query: 29 CISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG---LPHIG 85 I+ +I L +G +A+ R+ + ++ + Y+W+FRGTPLLVQL + F P +G Sbjct: 81 AIAMLIGLTLGVLLAIARLS-KNRVMQTVSSGYIWLFRGTPLLVQLLLWFNLALFFPRLG 139 Query: 86 ---------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ +F A I+ L LN AY++EI+R I S+ +GQ +A+ A+G+ ++ Sbjct: 140 FGELSVDTNVIITAFGAAILGLGLNEGAYMAEIVRGGIQSVNRGQIEAAAALGMRQRHVT 199 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 I+LPQ + P+ + I++LK TS+ S I +P++ AQ I + + + Sbjct: 200 WRIVLPQAMRVIIPPIGNNLITMLKMTSLVSVIAVPDLLNRAQAISAKNFYVFEMLIVAT 259 Query: 197 FVYLILTSFCYIIQIKIES 215 YL++T+ IIQ+++E Sbjct: 260 VWYLLMTTIFTIIQMQLEK 278 >gi|111657046|ref|ZP_01407843.1| hypothetical protein SpneT_02001722 [Streptococcus pneumoniae TIGR4] Length = 507 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 54/152 (35%), Positives = 96/152 (63%), Gaps = 1/152 (0%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ +++ Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R Sbjct: 324 LVGWVLNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVR 383 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I+++ KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ Sbjct: 384 GGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISV 443 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E++ + + + TYQ + +A +Y +LT Sbjct: 444 VELYFSGNTVATQTYQYFQTFTIIAVIYFVLT 475 >gi|298502248|ref|YP_003724188.1| amino acid ABC superfamily transporter membrane protein [Streptococcus pneumoniae TCH8431/19A] gi|298237843|gb|ADI68974.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pneumoniae TCH8431/19A] Length = 507 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 54/152 (35%), Positives = 96/152 (63%), Gaps = 1/152 (0%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ +++ Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R Sbjct: 324 LVGWVLNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVR 383 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I+++ KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ Sbjct: 384 GGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISV 443 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E++ + + + TYQ + +A +Y +LT Sbjct: 444 VELYFSGNTVATQTYQYFQTFTIIAVIYFVLT 475 >gi|227894181|ref|ZP_04011986.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] gi|227864011|gb|EEJ71432.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] Length = 168 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 97/161 (60%), Gaps = 5/161 (3%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +++FYVWI RGTPLL+QL +FYGLP + IVF + A + + LN++AY +EI R S Sbjct: 5 VVNFYVWIMRGTPLLLQLIFVFYGLPIVHIVFPRYQAALFAFVLNYAAYFAEIFRGGFQS 64 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ++A+ + L R QT+ II+PQ I + +E I+++K +S+ I + ++ + Sbjct: 65 IDEGQFEAAKVLRLNRWQTMTKIIIPQVIKIVLPSIGNEVINLVKDSSLVYVIGLGDLLR 124 Query: 177 TAQRIVS--TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 ++ T PL++ + +YLIL S C I K+E Sbjct: 125 AGNVAMARDVTLVPLVL---VGVIYLILISVCAFILKKLEG 162 >gi|315304435|ref|ZP_07874723.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria ivanovii FSL F6-596] gi|313627196|gb|EFR96041.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria ivanovii FSL F6-596] Length = 486 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++T+ +A I + ++G +A++++ + + Y+ RGTPLL+Q+F++F+ Sbjct: 286 GTLITIALAAIGVLCGAVLGSLLALMKLAKT-RWLRWPAACYIEFVRGTPLLIQIFIVFF 344 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G IG+ +FV+ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+T+ ++R+I Sbjct: 345 GTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQSASMRYI 404 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L +EF++++K +S+ S I + E+ + +++P I + +Y Sbjct: 405 ILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIY 464 Query: 200 LILT 203 ILT Sbjct: 465 FILT 468 >gi|258611866|ref|ZP_05711691.1| LOW QUALITY PROTEIN: amino acid ABC transporter [Listeria monocytogenes FSL R2-503] gi|258606739|gb|EEW19347.1| LOW QUALITY PROTEIN: amino acid ABC transporter [Listeria monocytogenes FSL R2-503] Length = 444 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 59/190 (31%), Positives = 115/190 (60%), Gaps = 9/190 (4%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++T+ +A I + I+G +A++++ + + Y+ RGTPLL+Q+F++F+ Sbjct: 244 GTLITIALAAIGVLCGAILGSLLALMKLAKT-RWLRWPAACYIEFVRGTPLLIQIFIVFF 302 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G IG+ +FV+ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+T+ ++R+I Sbjct: 303 GTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYI 362 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L +EF++++K +S+ S I + E+ + +++P F+ Sbjct: 363 ILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKP--------FIP 414 Query: 200 LILTSFCYII 209 LI+TS Y + Sbjct: 415 LIITSLIYFV 424 >gi|83746154|ref|ZP_00943208.1| Hypothetical Protein RRSL_04190 [Ralstonia solanacearum UW551] gi|207722043|ref|YP_002252481.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2] gi|207741843|ref|YP_002258235.1| amino-acid transmembrane abc transporter protein [Ralstonia solanacearum IPO1609] gi|83727120|gb|EAP74244.1| Hypothetical Protein RRSL_04190 [Ralstonia solanacearum UW551] gi|206587217|emb|CAQ17801.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2] gi|206593227|emb|CAQ60154.1| amino-acid transmembrane abc transporter protein [Ralstonia solanacearum IPO1609] Length = 223 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 66/184 (35%), Positives = 109/184 (59%), Gaps = 2/184 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL A VVT+ + +SF++S +IG +A++R+ + S V I RG P++V Sbjct: 14 LPILLQGA-VVTVEVTVLSFLLSSVIGLALALMRLSPVKAV-SAAGATVVNIIRGLPIIV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I++ LP IGI +F A +I L + +SAY +E R+ I ++ GQ +A+ A+G+ Sbjct: 72 QLFYIYFVLPDIGIQLTAFQAGVIGLGIAYSAYQAENFRAGIEAVDPGQREAAQAMGMRG 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +R +ILPQ + P + + +LK +S+ STIT+ E+ + Q I S+T+Q + +Y Sbjct: 132 ALIMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAGQLIASSTFQNMTVY 191 Query: 193 CELA 196 +A Sbjct: 192 TLVA 195 >gi|310830296|ref|YP_003965396.1| polar amino acid ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] gi|308753202|gb|ADO44345.1| polar amino acid ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] Length = 218 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 63/184 (34%), Positives = 115/184 (62%), Gaps = 1/184 (0%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 +AI TL ++ I+FV I G IA+ R + +++ ++ +F+GTPLL+QLF+++ Sbjct: 15 SAIRWTLLLSLIAFVGGAIGGMLIALARTS-RNVVLNRFARAFIEVFQGTPLLMQLFLVY 73 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 +GL +G+ + +A ++LTL+ SAY+ EI R +I ++P+GQ +A+ A+ L+ +RH Sbjct: 74 FGLAVVGLPINPLLAAAVALTLHASAYLGEIWRGAIEAVPQGQSEAATALSLSYPDRMRH 133 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 +ILPQ + + P + ++K TS+AS I E+ + Q + + T+QP +++ +A + Sbjct: 134 VILPQAMRVATAPTVGFLVQLIKGTSLASIIGFTELTRAGQIVNNATFQPFLVFGTVAAL 193 Query: 199 YLIL 202 Y IL Sbjct: 194 YFIL 197 >gi|217963588|ref|YP_002349266.1| amino acid ABC transporter permease [Listeria monocytogenes HCC23] gi|217332858|gb|ACK38652.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria monocytogenes HCC23] gi|307571836|emb|CAR85015.1| amino acid ABC transporter, amino acid-binding/permease protein [Listeria monocytogenes L99] Length = 486 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++T+ +A I + I+G +A++++ + + Y+ RGTPLL+Q+F++F+ Sbjct: 286 GTLITIALAAIGVLCGAILGSLLALMKLAKT-RWLRWPAACYIEFVRGTPLLIQIFIVFF 344 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G IG+ +FV+ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+T+ ++R+I Sbjct: 345 GTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYI 404 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L +EF++++K +S+ S I + E+ + +++P I + +Y Sbjct: 405 ILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIY 464 Query: 200 LILT 203 +LT Sbjct: 465 FVLT 468 >gi|300689743|ref|YP_003750738.1| amino-acid ABC transporter [Ralstonia solanacearum PSI07] gi|299076803|emb|CBJ49413.1| putative amino-acid ABC transporter [Ralstonia solanacearum PSI07] Length = 223 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 66/184 (35%), Positives = 109/184 (59%), Gaps = 2/184 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL A VVT+ + +SF++S +IG +A++R+ + S V I RG P++V Sbjct: 14 LPILLQGA-VVTVEVTVLSFLLSSVIGLALALMRLSPVKAV-SAAGATIVNIIRGLPIIV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I++ LP IGI +F A +I L + +SAY +E R+ I ++ GQ +A+ A+G+ Sbjct: 72 QLFYIYFVLPDIGIQLSAFQAGVIGLGIAYSAYQAENFRAGIEAVDPGQREAAQAMGMRG 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +R +ILPQ + P + + +LK +S+ STIT+ E+ + Q I S+T+Q + +Y Sbjct: 132 ALIMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAGQLIASSTFQNMTVY 191 Query: 193 CELA 196 +A Sbjct: 192 TLVA 195 >gi|163747860|ref|ZP_02155196.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Oceanibulbus indolifex HEL-45] gi|161378861|gb|EDQ03294.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Oceanibulbus indolifex HEL-45] Length = 224 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 118/201 (58%), Gaps = 6/201 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL +A V +LI+ +AV R+ ++ + ++ FRGTPLLVQLF+ ++GLP Sbjct: 22 LTLFMAVAGMVFALILASLLAVERVA-KVPVLDWSVVLFISFFRGTPLLVQLFLFYFGLP 80 Query: 83 HIGIVF----DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 + + F D A I+ LTL+FSAY++E IR++I+ + + QW+A+ +IG+T+ Q + Sbjct: 81 QV-LSFLTQIDGVTAAIMGLTLHFSAYMAESIRAAIMGVDRSQWEAAQSIGMTQGQLMWR 139 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 IILPQ +A L + FI ++K TS+A T+ + E+ AQ+ + ++ + + + Sbjct: 140 IILPQAARIAAPTLVNYFIDMIKGTSLAFTLGVTEMMGAAQKEAAGSFLYFEAFLAVPVM 199 Query: 199 YLILTSFCYIIQIKIESSVTQ 219 Y ++ Q ++E+ + + Sbjct: 200 YWVIVEVLSQGQKRLETHLNK 220 >gi|294670249|ref|ZP_06735142.1| glutamine/glutamate ABC transporter, permease protein [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307986|gb|EFE49229.1| glutamine/glutamate ABC transporter, permease protein [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 251 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 64/192 (33%), Positives = 105/192 (54%), Gaps = 15/192 (7%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-----IRIFFSDTIIS 55 M + + I F + A +TL ++ +SL +G +AV IR F+ Sbjct: 33 MNWSYLAAAIPKFAE----AAKLTLELSVYGIALSLAVGLPVAVVTAYRIRPFY------ 82 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + Y+ + R TPLL+QLF ++YGLP IGI +D F II+LT ++Y++E +R+ I+ Sbjct: 83 FLARGYIELSRNTPLLIQLFFLYYGLPKIGIKWDGFTCSIIALTFLGASYMAEALRAGIL 142 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++PKGQ +A AIGL R Q R++ LPQ + + + + ++K TSV S + I E+ Sbjct: 143 AVPKGQIEAGKAIGLNRFQIFRYVELPQAWAVAVPAIGANILFLMKETSVVSAVGIAELL 202 Query: 176 QTAQRIVSTTYQ 187 + I+ Y+ Sbjct: 203 FVTKDIIGMDYK 214 >gi|259047505|ref|ZP_05737906.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter, permease protein [Granulicatella adiacens ATCC 49175] gi|259035696|gb|EEW36951.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter, permease protein [Granulicatella adiacens ATCC 49175] Length = 213 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 123/212 (58%), Gaps = 3/212 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 LII +P + A T+ ++ S V+ + G +A+ R+ S ++S Y+ I Sbjct: 1 MELIIKYWPLFIEGA-TTTILLSFFSVVVGVGCGTLMALARLS-SHKVLSNAAKVYIDII 58 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQL+++++GL I + + F++ +I++++N +AYI+EIIRS I S+ KGQ +A+ Sbjct: 59 RGTPLLVQLYLVYFGLATI-LDLNDFLSGVIAVSVNTTAYIAEIIRSGIQSVDKGQMEAA 117 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ + +R IILPQ + + +EF +++K TS+ S I I ++ ++ + T Sbjct: 118 RSMGMPKGMAMRQIILPQAMKNILPAIGNEFATLIKETSIVSLIGIHDLMYSSDTVRGAT 177 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + I AF+Y ++T+ K+E + Sbjct: 178 FTVFIPLLMTAFLYFVMTTTIAFFMDKLERKL 209 >gi|163791026|ref|ZP_02185447.1| putative ABC-type amino-acid transporter permease protein [Carnobacterium sp. AT7] gi|159873671|gb|EDP67754.1| putative ABC-type amino-acid transporter permease protein [Carnobacterium sp. AT7] Length = 236 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 105/179 (58%), Gaps = 1/179 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL +A ++ +SL+IG I ++ + I+ I YV IF+ PL++Q+F ++ GL Sbjct: 29 TLQVAILALALSLVIGVIIGILSTA-QNVILRSIARVYVEIFQNIPLVIQIFFMYNGLAM 87 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 G+V F+ +I + L AYI E++R+ I+SIPKGQ +A+Y+ G QT+R++ILPQ Sbjct: 88 AGLVLSEFMIGVIGVGLYHGAYIGEVVRAGILSIPKGQQEAAYSQGFNYTQTMRYVILPQ 147 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + + PL+++ ++++K+TSV + I ++ A S++ Y +Y +L Sbjct: 148 MVKSILPPLTNQAVNLIKNTSVLAIIAGADLMYAADSYASSSLNYGTSYVVAGLLYFML 206 >gi|300763939|ref|ZP_07073935.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter [Listeria monocytogenes FSL N1-017] gi|300515280|gb|EFK42331.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter [Listeria monocytogenes FSL N1-017] Length = 486 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++T+ +A I + I+G +A++++ + + Y+ RGTPLL+Q+F++F+ Sbjct: 286 GTLITIALAAIGVLCGAILGSLLALMKLAKT-RWLRWPAACYIEFVRGTPLLIQIFIVFF 344 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G IG+ +FV+ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+T+ ++R+I Sbjct: 345 GTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYI 404 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L +EF++++K +S+ S I + E+ + +++P I + +Y Sbjct: 405 ILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIY 464 Query: 200 LILT 203 +LT Sbjct: 465 FVLT 468 >gi|254826861|ref|ZP_05231548.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL N3-165] gi|258599240|gb|EEW12565.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL N3-165] Length = 486 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++T+ +A I + I+G +A++++ + + Y+ RGTPLL+Q+F++F+ Sbjct: 286 GTLITIALAAIGVLCGAILGSLLALMKLAKT-RWLRWPAACYIEFVRGTPLLIQIFIVFF 344 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G IG+ +FV+ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+T+ ++R+I Sbjct: 345 GTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYI 404 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L +EF++++K +S+ S I + E+ + +++P I + +Y Sbjct: 405 ILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIY 464 Query: 200 LILT 203 +LT Sbjct: 465 FVLT 468 >gi|172065440|ref|YP_001816152.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171997682|gb|ACB68599.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 297 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 112/204 (54%), Gaps = 14/204 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY---- 79 T+ + ++ + +++G AV+R+ S+ ++ I Y+W+FRGTP+++QL + F Sbjct: 81 TIVMTVLAMTLGVVLGVVTAVMRLS-SNPVLGAIAQGYIWLFRGTPVILQLLLWFNLALV 139 Query: 80 ----GLPHIG-----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 G+P I V F+A ++ L +N AY SE++R+ ++S+ GQ++A+ +IG+ Sbjct: 140 FPTLGIPGIAEYRTVDVMTPFLAAVLGLGINQGAYTSEVVRAGLLSVDTGQYEAAKSIGM 199 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 R Q +R IILPQ + P+ +E I ++K TS+AS + E+ AQ I + + Sbjct: 200 ARLQALRRIILPQAMRVIVPPIGNELIGMVKLTSLASVVQYAEMLHNAQNIYYANARVIE 259 Query: 191 IYCELAFVYLILTSFCYIIQIKIE 214 + YL + + + Q ++E Sbjct: 260 LLIVAGIWYLAVVTVLSLAQARVE 283 >gi|134298610|ref|YP_001112106.1| polar amino acid ABC transporter, inner membrane subunit [Desulfotomaculum reducens MI-1] gi|134051310|gb|ABO49281.1| amino acid ABC transporter membrane protein, PAAT family [Desulfotomaculum reducens MI-1] Length = 222 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 67/203 (33%), Positives = 120/203 (59%), Gaps = 10/203 (4%) Query: 20 AIVVTLPIACISFVISLIIGF---FIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 A +VTL + +S ++++IIG F + R +F I +L Y+ + RGTPL+VQL Sbjct: 18 ATIVTLKLTSVSLLLAMIIGLVFAFFKISRNYFLQNIANL----YITLVRGTPLVVQLMF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++G+ + +V +F A ++L ++ AYI+EI R +I SI +GQ +A+ ++G++ ++ Sbjct: 74 LYFGIIKL-VVLPAFWAGSLALAIHAGAYIAEIFRGAIQSINQGQMEAARSLGMSYPLSM 132 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 R IILPQ + PL ++FI LK +S+ + + +PEI+ TA + +QP Y Sbjct: 133 RRIILPQAFRRAIPPLGNQFIIGLKDSSLVAYLGVPEIYGTALYAQAENFQPFETYLVAG 192 Query: 197 FVYLILT-SFCYIIQIKIESSVT 218 YL+L F +++ K+E+ + Sbjct: 193 LYYLVLVIIFSFLVN-KLEAKLN 214 >gi|290893601|ref|ZP_06556583.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL J2-071] gi|290556803|gb|EFD90335.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL J2-071] Length = 486 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++T+ +A I + I+G +A++++ + + Y+ RGTPLL+Q+F++F+ Sbjct: 286 GTLITIALAAIGVLCGAILGSLLALMKLAKT-RWLRWPAACYIEFVRGTPLLIQIFIVFF 344 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G IG+ +FV+ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+T+ ++R+I Sbjct: 345 GTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYI 404 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L +EF++++K +S+ S I + E+ + +++P I + +Y Sbjct: 405 ILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIY 464 Query: 200 LILT 203 +LT Sbjct: 465 FVLT 468 >gi|16804289|ref|NP_465774.1| hypothetical protein lmo2250 [Listeria monocytogenes EGD-e] gi|224500950|ref|ZP_03669257.1| hypothetical protein LmonFR_00275 [Listeria monocytogenes FSL R2-561] gi|16411720|emb|CAD00328.1| arpJ [Listeria monocytogenes EGD-e] Length = 486 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++T+ +A I + I+G +A++++ + + Y+ RGTPLL+Q+F++F+ Sbjct: 286 GTLITIALAAIGVLCGAILGSLLALMKLAKT-RWLRWPAACYIEFVRGTPLLIQIFIVFF 344 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G IG+ +FV+ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+T+ ++R+I Sbjct: 345 GTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYI 404 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L +EF++++K +S+ S I + E+ + +++P I + +Y Sbjct: 405 ILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIY 464 Query: 200 LILT 203 +LT Sbjct: 465 FVLT 468 >gi|23501835|ref|NP_697962.1| amino acid ABC transporter permease [Brucella suis 1330] gi|161618908|ref|YP_001592795.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella canis ATCC 23365] gi|163843220|ref|YP_001627624.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis ATCC 23445] gi|254704253|ref|ZP_05166081.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis bv. 3 str. 686] gi|254719049|ref|ZP_05180860.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella sp. 83/13] gi|256061051|ref|ZP_05451207.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella neotomae 5K33] gi|256369377|ref|YP_003106885.1| amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|261325052|ref|ZP_05964249.1| polar amino acid ABC transporter [Brucella neotomae 5K33] gi|261754921|ref|ZP_05998630.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686] gi|265984041|ref|ZP_06096776.1| polar amino acid ABC transporter [Brucella sp. 83/13] gi|306838982|ref|ZP_07471804.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653] gi|306840463|ref|ZP_07473222.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] gi|306843853|ref|ZP_07476448.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] gi|23347771|gb|AAN29877.1| amino acid ABC transporter, permease protein [Brucella suis 1330] gi|161335719|gb|ABX62024.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365] gi|163673943|gb|ABY38054.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445] gi|255999537|gb|ACU47936.1| amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|261301032|gb|EEY04529.1| polar amino acid ABC transporter [Brucella neotomae 5K33] gi|261744674|gb|EEY32600.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686] gi|264662633|gb|EEZ32894.1| polar amino acid ABC transporter [Brucella sp. 83/13] gi|306275608|gb|EFM57332.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] gi|306289478|gb|EFM60696.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] gi|306405949|gb|EFM62206.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653] Length = 277 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 125/222 (56%), Gaps = 12/222 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I+++ ++ +++TL + IS VI ++ I R+ S + SL YV+ FRGT Sbjct: 55 LIETYGPRYWSGLLITLKLVAISIVIGALLSLPITAARMSNSRWLRSLAFG-YVYFFRGT 113 Query: 69 PLLVQLFVIFYG-------LPHIGI-VF--DSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLL Q F+I+YG L +G+ VF D++ I++ +LN +AY +EI+R +I S+ Sbjct: 114 PLLAQTFLIYYGFGTFRPFLESVGLWVFFRDAWNCAILAFSLNTAAYQAEILRGAIESVA 173 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQW+ + A+G++++ T +ILPQ + + P +E I ++K +++ + IT+ ++ Sbjct: 174 VGQWEGAAALGISKRVTFWKVILPQALIVALRPYGNEIILMIKGSAIVAIITVLDLMGET 233 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +R S T+ Y A +YL++ I +E +T+H Sbjct: 234 RRAYSRTFD-FQTYLWAAVIYLLMVEILRHIWDALERRLTRH 274 >gi|330807008|ref|YP_004351470.1| ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375116|gb|AEA66466.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 229 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 123/209 (58%), Gaps = 15/209 (7%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFYVW 63 +++II P+L A +TL + I+ + L++ + + R S + + + Y++ Sbjct: 3 WDVIIKWLPKLAQGA-TLTLELVAIAVIAGLLLAIPLGIAR---SSRLWYVRAFPYAYIF 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSI 114 FRGTPLLVQLF+++YGL V D F ++TL+ +AYI+EI+R +I Sbjct: 59 FFRGTPLLVQLFLVYYGLAQFDAVRSSAMWPYLRDPFWCATATMTLHTAAYIAEILRGAI 118 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IP+G+ +A+ A+G++R + + +I+LP+ S+E I +LK++++AST+T+ E+ Sbjct: 119 QAIPRGEIEAARALGMSRPKALLYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLEL 178 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I++ TY P+ I+ YL+++ Sbjct: 179 TGMARTIIARTYMPVEIFFAAGMFYLLMS 207 >gi|313607306|gb|EFR83728.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL F2-208] Length = 486 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++T+ +A I + I+G +A++++ + + Y+ RGTPLL+Q+F++F+ Sbjct: 286 GTLITIALAAIGVLCGAILGSLLALMKLAKT-RWLRWPAACYIEFVRGTPLLIQIFIVFF 344 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G IG+ +FV+ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+T+ ++R+I Sbjct: 345 GTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYI 404 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L +EF++++K +S+ S I + E+ + +++P I + +Y Sbjct: 405 ILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIY 464 Query: 200 LILT 203 +LT Sbjct: 465 FVLT 468 >gi|313885604|ref|ZP_07819354.1| ABC transporter, permease protein [Eremococcus coleocola ACS-139-V-Col8] gi|312619334|gb|EFR30773.1| ABC transporter, permease protein [Eremococcus coleocola ACS-139-V-Col8] Length = 551 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 65/198 (32%), Positives = 112/198 (56%), Gaps = 16/198 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIR-------------IFFSDTIISLIMHFYVWIFR 66 + TL IA +S +I +IG +A+ R IF+ I+ ++ Y+ IFR Sbjct: 319 GAINTLWIALLSTIIGTLIGLLVAIYRTIPISRKNNPIGYIFYK--ILDFLIVAYIEIFR 376 Query: 67 GTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 GTP++VQ +IFYGL + S VA ++ +++N AY+SE++R I S+ +GQ +A+ Sbjct: 377 GTPMMVQAMLIFYGLKLFFNLDLSSMVAAVLIVSINTGAYLSEVMRGGITSVDEGQAEAA 436 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 AIG+ QT+ +++LPQ + + L +EF+ +K TSV + I + E+F T + + +T Sbjct: 437 KAIGMNHFQTMSNVVLPQALRATLPALGNEFVINIKDTSVLNVIAVTELFFTTKSVAGST 496 Query: 186 YQPLIIYCELAFVYLILT 203 Y + + +Y +LT Sbjct: 497 YLTFQTFLITSIIYFVLT 514 >gi|262041102|ref|ZP_06014320.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041552|gb|EEW42605.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 199 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 66/198 (33%), Positives = 113/198 (57%), Gaps = 3/198 (1%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I+ + LIIG R F I + I ++ I RGTP++VQ+ I++ LP Sbjct: 1 MTLWISVLGLAGGLIIGLVAGFARCF-GGWIANHIALVFIEIIRGTPIVVQVMFIYFALP 59 Query: 83 HI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 + D F A ++++ +N AYI+EI R +++SI KG +A A+GL+R++TIRH+I Sbjct: 60 MAFSDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETIRHVI 119 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LP + PL +++I +K TS+ I + E+ + Q I++ ++ L I+ +A +YL Sbjct: 120 LPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYL 179 Query: 201 ILTSFCYIIQIKIESSVT 218 I+T I ++E + Sbjct: 180 IITLVLSFILRRLERRMK 197 >gi|16801415|ref|NP_471683.1| hypothetical protein lin2352 [Listeria innocua Clip11262] gi|16414875|emb|CAC97579.1| lin2352 [Listeria innocua Clip11262] Length = 486 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++T+ +A I + I+G +A++++ + + Y+ RGTPLL+Q+F++F+ Sbjct: 286 GTLITIALAAIGVLCGAILGSLLALMKLAKT-RWLRWPAACYIEFVRGTPLLIQIFIVFF 344 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G IG+ +FV+ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+T+ ++R+I Sbjct: 345 GTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYI 404 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L +EF++++K +S+ S I + E+ + +++P I + +Y Sbjct: 405 ILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIY 464 Query: 200 LILT 203 +LT Sbjct: 465 FVLT 468 >gi|326315960|ref|YP_004233632.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372796|gb|ADX45065.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Acidovorax avenae subsp. avenae ATCC 19860] Length = 220 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 63/193 (32%), Positives = 114/193 (59%), Gaps = 2/193 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D P LL A VVT+ + ++F++S +G +A+ ++ +SL ++ + RG P+ Sbjct: 10 DFLPILLQGA-VVTVQVTVLAFLLSSALGLILALGKLS-PVRAVSLAASTFINVIRGLPI 67 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 +VQLF I++ LP G+ +F A +I L + +SAY +E R+ I ++ GQ +A+ A+G+ Sbjct: 68 IVQLFYIYFVLPDFGVQLTAFQAGVIGLGIAYSAYQAENFRAGIEAVDPGQREAALAMGM 127 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 +R +ILPQ + P + + +LK +S+ STIT+ E+ + Q I S+T+Q + Sbjct: 128 RPALLMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAGQLIASSTFQNMT 187 Query: 191 IYCELAFVYLILT 203 +Y +A +YL ++ Sbjct: 188 VYTLVALLYLAMS 200 >gi|126654038|ref|ZP_01725869.1| hypothetical protein BB14905_15635 [Bacillus sp. B14905] gi|126589472|gb|EAZ83617.1| hypothetical protein BB14905_15635 [Bacillus sp. B14905] Length = 241 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 111/212 (52%), Gaps = 14/212 (6%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI---------FFSD 51 M EW II++ Q+ TL I+ IS +I IGFFI ++ F+ Sbjct: 1 MSLEWILSIIENNWQMFLRGAYYTLLISTISTIIGAFIGFFIGIMHTIPVRKKGVKFYGL 60 Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEII 110 +I+ I+ YV FRGTP++VQ V++YGL GI A I+ ++LN AY++EI+ Sbjct: 61 KLINFILTCYVEFFRGTPMIVQAMVVYYGLDIAFGIDMHFITAGILVVSLNTGAYMAEIV 120 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R I+SI GQ++A+ AIG+ Q + H++LPQ ++ I +K T+V + I Sbjct: 121 RGGIVSIDNGQYEAASAIGMNHFQIMLHVVLPQVARNVLPATGNQLIMNIKDTAVLNVIG 180 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + E+F + I ++ Y E FV IL Sbjct: 181 VTELFFQTKSISGNNFR----YFESFFVACIL 208 >gi|253700904|ref|YP_003022093.1| polar amino acid ABC transporter inner membrane protein [Geobacter sp. M21] gi|251775754|gb|ACT18335.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter sp. M21] Length = 261 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 63/192 (32%), Positives = 111/192 (57%), Gaps = 14/192 (7%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I+VT + + ++++++G F + RI + I+ YV I RG PLLVQ+F I+Y Sbjct: 62 GILVTFQVTLGAILLAIVLGLFTGLGRIS-KNRFINGTASLYVEIIRGIPLLVQIFYIYY 120 Query: 80 GLPHIGIVFDSFVAI------IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 L SFV + II++ + + AY+ E++R+ I SI KGQ +A+ ++G+ + Sbjct: 121 AL-------GSFVQVPPILSAIIAMAVCYGAYMGEVVRAGIESIHKGQREAALSLGMNGR 173 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 QT+ H+ILPQ + P+ +EFI++LK +S+ S I + ++ + + S ++ Y Sbjct: 174 QTMIHVILPQAVKVILPPVGNEFIALLKDSSLVSIIAVADLLRRGREFASESFTYFETYT 233 Query: 194 ELAFVYLILTSF 205 +A +YLI+T F Sbjct: 234 VIALIYLIITLF 245 >gi|209547516|ref|YP_002279434.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538760|gb|ACI58694.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 219 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 62/187 (33%), Positives = 106/187 (56%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + + P LL +T+ + ++++ G +A+ R S IS + F Sbjct: 1 MEWDW-DFVWQIMPTLL-EGFKITILATILGAAVAMVAGLGLAIAR-RSSVAAISRTVGF 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL+ IFY LP IGI A +I + ++++ Y +E+ R+ I ++P+G Sbjct: 58 VSEFIRGTPLLVQLYFIFYVLPDIGIRLSPLTAGVIGMGIHYATYTAEVYRAGIENVPRG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A LT +Q H++LPQ I L++ FI++ K T + S IT+ E+ A+ Sbjct: 118 QWEAAKATNLTTRQAWIHVVLPQAIPPMIPALANYFIAMFKETPLLSAITVLELMNQAKS 177 Query: 181 IVSTTYQ 187 I ++ Y+ Sbjct: 178 IANSNYR 184 >gi|70733737|ref|YP_257377.1| glutamine/glutamate ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68348036|gb|AAY95642.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 221 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 62/182 (34%), Positives = 108/182 (59%), Gaps = 2/182 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + I+ + P L A+ VTL + I+ SL++ A + +F + + LI YV + Sbjct: 5 YAFILSTLPAFL-KAVGVTLQVGLIAIGTSLLVALINATLLVFRTPYLHRLI-GLYVELA 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL+QLF +++ LP +GI F A II++T AY++E++R+ + ++P+ Q ++ Sbjct: 63 RNTPLLIQLFFVYFALPALGIKVSGFTAAIITMTFLGGAYLTEVLRAGVEAVPQAQLESG 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IGL++ Q +R++ILPQ S L + FI +LK T+V S + +PEI T + ++ Sbjct: 123 RSIGLSQWQLLRYVILPQAGILSLPSLFANFIFLLKETTVVSAVAVPEILYTTKSYIALY 182 Query: 186 YQ 187 Y+ Sbjct: 183 YK 184 >gi|271966004|ref|YP_003340200.1| polar amino acid ABC transporter inner membrane protein [Streptosporangium roseum DSM 43021] gi|270509179|gb|ACZ87457.1| polar amino acid ABC transporter inner membrane protein [Streptosporangium roseum DSM 43021] Length = 304 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 128/230 (55%), Gaps = 21/230 (9%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W + F + + + + VT+ I+ ++ + L++G +A++R+ + ++S + FY+W Sbjct: 51 DWGKVAEYVFHERILSGVWVTIEISVLATALGLVLGVLVAIMRLA-HNPVLSGLATFYIW 109 Query: 64 IFRGTPLLVQLFVIFYGL----PH---------IGIVFDS------FVAIIISLTLNFSA 104 FRGTP+LVQL + +Y L P IG+ +D+ F + ++ L LN +A Sbjct: 110 FFRGTPVLVQL-IFWYNLAFLFPELVLKVPFTMIGVKWDTNQVMTGFTSAMLGLGLNLAA 168 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 Y +E +R+ I ++ KGQ +A+YA+G+T + +R I+LPQ + P +EFIS+LK+TS Sbjct: 169 YFAETVRAGIQAVDKGQTEAAYALGMTPAKRMRVIVLPQALRIIIPPTGNEFISMLKTTS 228 Query: 165 VASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + + ++ A +I + + + Y+++T+ +Q ++E Sbjct: 229 LVYVVAGHDLMTNASQIYKANNLIMELLIVASLWYMLMTAVATFLQGRLE 278 >gi|213971834|ref|ZP_03399936.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301383371|ref|ZP_07231789.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302064064|ref|ZP_07255605.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302134968|ref|ZP_07260958.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213923380|gb|EEB56973.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 215 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 110/184 (59%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ ++F+ +IG + V+R + + Y+ +F+GTPLL+QLF++F+G+ Sbjct: 19 TLALSLVAFIGGGLIGLLVMVMRTS-EKSGPRVTAKLYIELFQGTPLLMQLFLVFFGVAL 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ + A ++LTL SAY++EI R + SI KGQW+AS ++ +T + +R++ILPQ Sbjct: 78 MGMDISPWAAAALALTLFTSAYLAEIWRGCVESISKGQWEASASLAMTPLEQMRYVILPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T+V S I E+ +T + + T++P ++Y +A Y IL Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGSMLANATFEPFMVYGFVALGYFIL- 196 Query: 204 SFCY 207 CY Sbjct: 197 --CY 198 >gi|254899048|ref|ZP_05258972.1| hypothetical protein LmonJ_04529 [Listeria monocytogenes J0161] gi|254912811|ref|ZP_05262823.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254937138|ref|ZP_05268835.1| arpJ [Listeria monocytogenes F6900] gi|284802697|ref|YP_003414562.1| hypothetical protein LM5578_2453 [Listeria monocytogenes 08-5578] gi|284995839|ref|YP_003417607.1| hypothetical protein LM5923_2404 [Listeria monocytogenes 08-5923] gi|258609741|gb|EEW22349.1| arpJ [Listeria monocytogenes F6900] gi|284058259|gb|ADB69200.1| hypothetical protein LM5578_2453 [Listeria monocytogenes 08-5578] gi|284061306|gb|ADB72245.1| hypothetical protein LM5923_2404 [Listeria monocytogenes 08-5923] gi|293590807|gb|EFF99141.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 486 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++T+ +A I + I+G +A++++ + + Y+ RGTPLL+Q+F++F+ Sbjct: 286 GTLITIALAAIGVLCGAILGSLLALMKLAKT-RWLRWPAACYIEFVRGTPLLIQIFIVFF 344 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G IG+ +FV+ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+T+ ++R+I Sbjct: 345 GTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYI 404 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L +EF++++K +S+ S I + E+ + +++P I + +Y Sbjct: 405 ILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIY 464 Query: 200 LILT 203 +LT Sbjct: 465 FVLT 468 >gi|224498994|ref|ZP_03667343.1| hypothetical protein LmonF1_04543 [Listeria monocytogenes Finland 1988] gi|254831313|ref|ZP_05235968.1| hypothetical protein Lmon1_08142 [Listeria monocytogenes 10403S] Length = 486 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++T+ +A I + I+G +A++++ + + Y+ RGTPLL+Q+F++F+ Sbjct: 286 GTLITIALAAIGVLCGAILGSLLALMKLAKT-RWLRWPAACYIEFVRGTPLLIQIFIVFF 344 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G IG+ +FV+ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+T+ ++R+I Sbjct: 345 GTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYI 404 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L +EF++++K +S+ S I + E+ + +++P I + +Y Sbjct: 405 ILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIY 464 Query: 200 LILT 203 +LT Sbjct: 465 FVLT 468 >gi|310658910|ref|YP_003936631.1| ABC transporter permease [Clostridium sticklandii DSM 519] gi|308825688|emb|CBH21726.1| putative transporter subunit: permease component of ABC superfamily transporter [Clostridium sticklandii] Length = 212 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 62/181 (34%), Positives = 110/181 (60%), Gaps = 5/181 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ I+ ++ LI G ++++++ I+ I Y+ RGTPLLVQL++++YGL Sbjct: 20 TLMLSFITVILGLIGGIVLSIMKLS-KFKILQNISGAYIAFIRGTPLLVQLYIVYYGLKD 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 I + FVA +I++++N SAYI+EIIR+ I+++ KGQ++A+ ++G+T + +ILPQ Sbjct: 79 IPM----FVAGVIAMSINSSAYIAEIIRAGIMAVDKGQFEATKSLGMTGAMAYKEVILPQ 134 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +EFI ++K +++ S I + ++ I TY+P A +Y ILT Sbjct: 135 AFKNILPALGNEFIVLIKESAIVSVIGLHDLMYNVDTIRGITYKPFEPLLVAALIYFILT 194 Query: 204 S 204 + Sbjct: 195 A 195 >gi|253575036|ref|ZP_04852375.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251845492|gb|EES73501.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 216 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 67/172 (38%), Positives = 103/172 (59%), Gaps = 1/172 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L + VTL +A +S V+S +IG + VIR + ++S IM V + R PLL+ + Sbjct: 13 RFLADGLYVTLIVAGLSIVLSFLIGCIVGVIR-YTKLPVLSPIMLVGVELIRNLPLLLII 71 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F + + LP +GI A + LT+ +A ISEI+RS + SI KGQ +A+ + GL+ Q Sbjct: 72 FFMRFALPEVGIKLGLVAATVTGLTIFEAAMISEIVRSGLASIDKGQIEAARSSGLSAVQ 131 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 T+ HI+LPQ + PL S+FIS+LK TS+A I++PE+ A ++ Y Sbjct: 132 TLWHIVLPQGLRRMVPPLVSQFISLLKDTSLAVVISLPELMHHAGIVIGHGY 183 >gi|190895142|ref|YP_001985435.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700803|gb|ACE94885.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 222 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 124/204 (60%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y++ F+++ D++P LL + L +S +++L++G + ++R + + + + Sbjct: 1 MGYDFDFSVVWDAWPILL-DGTLKALYYTAVSSILALVLGVLVMLMRRS-NVSPVRITAR 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 ++ + R TP LVQLF IF+GLP IG+ F A I +LT+N +AYI+E++R + +P Sbjct: 59 VFIEVIRNTPFLVQLFFIFFGLPSIGLKFSVSFAAIAALTVNTAAYIAEVLRGGVDGLPY 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A A+GL R+Q IIL ++ LS++F+ ++ ++SV ++I+ PE+ +AQ Sbjct: 119 GQIEAGKALGLNRRQIFFDIILKPSVRAVYPGLSAQFVLLMLTSSVVASISAPELTYSAQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I S +++ +Y + +YL L+ Sbjct: 179 IIESQSFRSFEVYFVVTGIYLALS 202 >gi|46908483|ref|YP_014872.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes serotype 4b str. F2365] gi|226224858|ref|YP_002758965.1| amino acid ABC transporter, permease protein [Listeria monocytogenes Clip81459] gi|254825186|ref|ZP_05230187.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL J1-194] gi|254931637|ref|ZP_05264996.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes HPB2262] gi|254992059|ref|ZP_05274249.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL J2-064] gi|255519729|ref|ZP_05386966.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL J1-175] gi|46881754|gb|AAT05049.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria monocytogenes serotype 4b str. F2365] gi|225877320|emb|CAS06034.1| Putative amino acid ABC transporter, permease protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293583191|gb|EFF95223.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes HPB2262] gi|293594430|gb|EFG02191.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL J1-194] gi|328465831|gb|EGF37019.1| amino acid ABC transporter, permease protein [Listeria monocytogenes 1816] gi|328472142|gb|EGF43017.1| amino acid ABC transporter, permease protein [Listeria monocytogenes 220] gi|332312738|gb|EGJ25833.1| Permease protein, His/Glu/Gln/Arg/opinefamily [Listeria monocytogenes str. Scott A] Length = 486 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++T+ +A I + I+G +A++++ + + Y+ RGTPLL+Q+F++F+ Sbjct: 286 GTLITIALAAIGVLCGAILGSLLALMKLAKT-RWLRWPAACYIEFVRGTPLLIQIFIVFF 344 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G IG+ +FV+ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+T+ ++R+I Sbjct: 345 GTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYI 404 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L +EF++++K +S+ S I + E+ + +++P I + +Y Sbjct: 405 ILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIY 464 Query: 200 LILT 203 +LT Sbjct: 465 FVLT 468 >gi|330874083|gb|EGH08232.1| amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 215 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 110/184 (59%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ ++F+ +IG + V+R + + Y+ +F+GTPLL+QLF++F+G+ Sbjct: 19 TLALSLVAFIGGGLIGLLVMVMRTS-EKSGPRVAAKLYIELFQGTPLLMQLFLVFFGVAL 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ + A ++LTL SAY++EI R + SI KGQW+AS ++ +T + +R++ILPQ Sbjct: 78 MGMDISPWAAAALALTLFTSAYLAEIWRGCVESISKGQWEASASLAMTPLEQMRYVILPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T+V S I E+ +T + + T++P ++Y +A Y IL Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGSMLANATFEPFMVYGFVALGYFIL- 196 Query: 204 SFCY 207 CY Sbjct: 197 --CY 198 >gi|15674455|ref|NP_268629.1| putative glutamine-binding periplasmic protein [Streptococcus pyogenes M1 GAS] gi|13621552|gb|AAK33350.1| putative glutamine-binding periplasmic protein [Streptococcus pyogenes M1 GAS] Length = 522 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 104/191 (54%), Gaps = 10/191 (5%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISLIMHFYVWIFRGTPLLVQ 73 +TL I+ + + L IG I + R + ++ Y+ IFRGTP++VQ Sbjct: 298 MTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEIFRGTPMIVQ 357 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 VI+YG GI D +A I +++N AY+SEI+R I ++ KGQ+ A+ A+G T Sbjct: 358 SMVIYYGTAQAFGISIDRTLAAIFIVSINTGAYMSEIVRGGIFAVDKGQFKAATALGFTH 417 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT+R I+LPQ + +EF+ +K TSV + I++ E++ + + + TYQ + Sbjct: 418 GQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTF 477 Query: 193 CELAFVYLILT 203 +A +Y +LT Sbjct: 478 TIIAIIYFVLT 488 >gi|255026707|ref|ZP_05298693.1| hypothetical protein LmonocytFSL_10867 [Listeria monocytogenes FSL J2-003] Length = 486 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++T+ +A I + I+G +A++++ + + Y+ RGTPLL+Q+F++F+ Sbjct: 286 GTLITIALAAIGVLCGAILGSLLALMKLAKT-RWLRWPAACYIEFVRGTPLLIQIFIVFF 344 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G IG+ +FV+ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+T+ ++R+I Sbjct: 345 GTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQSASMRYI 404 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L +EF++++K +S+ S I + E+ + +++P I + +Y Sbjct: 405 ILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIY 464 Query: 200 LILT 203 +LT Sbjct: 465 FVLT 468 >gi|298291728|ref|YP_003693667.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296928239|gb|ADH89048.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 227 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 116/198 (58%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++++D + LL A +TL +A I+ V IIG F A+ R + +I + YV Sbjct: 7 FSVVLDRWRSLLDGA-TLTLELAFIAVVCGAIIGVFGAIGR-RGGNPLIERLCGAYVEGI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLLVQ+F++++GL +G+ F +F ++LT+N AY +EI+R+ SI +GQ +A+ Sbjct: 65 RNTPLLVQIFLVYFGLSSLGLKFSAFTVAAVALTINVGAYTTEIMRAGFDSIVRGQIEAA 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GL++ Q H+I+ I L+S+F+ ++ ++SV S I+ E+ A I S T Sbjct: 125 EGLGLSKAQIYWHVIIWPGIERVYPALTSQFVLLMLASSVTSQISAEELTAVANYIQSET 184 Query: 186 YQPLIIYCELAFVYLILT 203 Y+ Y +A +Y+ L+ Sbjct: 185 YRSFETYIVVALIYVALS 202 >gi|168181318|ref|ZP_02615982.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Bf] gi|237793771|ref|YP_002861323.1| amino acid ABC transporter permease [Clostridium botulinum Ba4 str. 657] gi|182675517|gb|EDT87478.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Bf] gi|229262160|gb|ACQ53193.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Ba4 str. 657] Length = 211 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 59/165 (35%), Positives = 100/165 (60%), Gaps = 5/165 (3%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + +I+ Y WIFRGTPL++QLF ++GLP IGI + A ++ +N+ AY++E R+ Sbjct: 47 LKIILSAYTWIFRGTPLMLQLFFAYFGLPVIGIRLEPLTAAYLTFIINYGAYLAETFRAG 106 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SI KGQ +A+ +G T QT+ II+PQ I P+ +E I+++K +++ + I I + Sbjct: 107 IESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKDSALVAAIGIGD 166 Query: 174 IFQTAQRIVST--TYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 + + A+ +V+ T P I A +YL++T+F +I +E Sbjct: 167 MLRAAKEVVTRDFTITPFFI---AAAIYLLITAFLVLIFRTLEKK 208 >gi|259503172|ref|ZP_05746074.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] gi|259168829|gb|EEW53324.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] Length = 502 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 64/180 (35%), Positives = 110/180 (61%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I IS + ++G A++R+ S + + + Y+ RGTP+LVQ+ +++G+ Sbjct: 306 TLIITVISVIFGFLLGTIFALMRLSQSKFLHGIAI-CYIEFIRGTPMLVQIMFVYFGIGA 364 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 I + VA II++++N AY++E+IRS I S+P GQ +A+ ++G+T+KQT R I+LPQ Sbjct: 365 IIQSMPALVAGIIAVSVNSGAYVAEVIRSGIQSLPVGQTEAARSLGMTKKQTFRFIVLPQ 424 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + L +EFI++LK +S+ STI + E+ Q + + TY+ ++ +Y ILT Sbjct: 425 ALRNIWPALGNEFITLLKDSSLVSTIGVGELMYQTQLVQADTYKGVLPLFITMMIYFILT 484 >gi|206577706|ref|YP_002238970.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|290512972|ref|ZP_06552336.1| octopine/nopaline transport system permease [Klebsiella sp. 1_1_55] gi|206566764|gb|ACI08540.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|289774585|gb|EFD82589.1| octopine/nopaline transport system permease [Klebsiella sp. 1_1_55] Length = 243 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 121/214 (56%), Gaps = 10/214 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L AA+ VTL + SF++ + + +R+ + S Y+ IFRG+PLL+QLF+ Sbjct: 15 LGAALPVTLGLFICSFILGGALALGVLALRMSHWP-LASGFAKGYILIFRGSPLLIQLFL 73 Query: 77 IFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 I+YGL G++ SF + +++L L +AY +EI+R +++IP GQ +A A Sbjct: 74 IYYGLGQFGVIRHSFLWPLLREPFICAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQA 133 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++R +R II P + + S+E I ++KST++AS +T+ ++ AQ+I+ TY+ Sbjct: 134 CGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTYR 193 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + ++ A +YL+L + +E +T HT Sbjct: 194 TMEVFLCAAAIYLLLNFIIVQLYALLERRLTPHT 227 >gi|209546709|ref|YP_002278627.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537953|gb|ACI57887.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 222 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 69/197 (35%), Positives = 112/197 (56%), Gaps = 4/197 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N++I +P ++ A VT+ I + + + +IGF +AV R + +I + V + R Sbjct: 6 NVLIGQWPAIVSGA-GVTIMIWILGTIAAAVIGFLMAVARQY-GGVLIDRALGAVVAVLR 63 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTP L+Q+F+++YG P +G+ D A +I +++ +AY SEI RS ++PKG +A Sbjct: 64 GTPFLIQIFLVYYGGPFVGLELDPLPAGLIGISVYGAAYFSEIFRSGFQAVPKGHIEAGE 123 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL-KSTSVASTITIPEIFQTAQRIVSTT 185 +GLT+ Q +R I+LP+ +T +P S + IL K T+V S IT+PE+ T I S Sbjct: 124 CVGLTKGQIVRRILLPE-MTMLVLPPSVNMVVILMKETAVLSIITVPELTATLSAIGSQQ 182 Query: 186 YQPLIIYCELAFVYLIL 202 Y + LA Y +L Sbjct: 183 YAFVEALSALALFYWVL 199 >gi|299065104|emb|CBJ36268.1| putative amino-acid ABC transporter [Ralstonia solanacearum CMR15] Length = 223 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 65/184 (35%), Positives = 109/184 (59%), Gaps = 2/184 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL A VVT+ + +SF++S +IG +A++R+ + S V I RG P++V Sbjct: 14 LPILLQGA-VVTVEVTVLSFLLSSVIGLALALMRLSPVKAV-SAAGATVVNIIRGLPIIV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I++ LP +GI +F A +I L + +SAY +E R+ I ++ GQ +A+ A+G+ Sbjct: 72 QLFYIYFVLPDVGIQLTAFQAGVIGLGIAYSAYQAENFRAGIEAVDPGQREAAQAMGMRG 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +R +ILPQ + P + + +LK +S+ STIT+ E+ + Q I S+T+Q + +Y Sbjct: 132 ALIMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAGQLIASSTFQNMTVY 191 Query: 193 CELA 196 +A Sbjct: 192 TLVA 195 >gi|166031609|ref|ZP_02234438.1| hypothetical protein DORFOR_01309 [Dorea formicigenerans ATCC 27755] gi|166028586|gb|EDR47343.1| hypothetical protein DORFOR_01309 [Dorea formicigenerans ATCC 27755] Length = 236 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 66/184 (35%), Positives = 105/184 (57%), Gaps = 5/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFS----DTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 TL IA +I +I+G IA +R+ +++ I FYV +FRGTP++VQL V +Y Sbjct: 31 TLLIAVTGLIIGIIVGTLIATVRVLPKYKTLPKVLNGICSFYVALFRGTPMVVQLLVFYY 90 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 L P IG+ ++ LN AYISEI+RS I S+ GQ +A A+GL+ ++ Sbjct: 91 VLLPIIGLKITGVQVAMLVFGLNSGAYISEIMRSGIQSVDSGQMEAGRAVGLSFGTSMMK 150 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 I++PQ + L +EFIS++K TSV S + +++ I S +Y+ ++ Y +A + Sbjct: 151 IVIPQAVKNILPTLGNEFISLIKETSVVSFVGAADLYVAFNYIGSNSYEFMVPYLVMALI 210 Query: 199 YLIL 202 Y+ L Sbjct: 211 YIAL 214 >gi|317047473|ref|YP_004115121.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316949090|gb|ADU68565.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 242 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 123/207 (59%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + D+F +L AA+ VTL + +F+ ++ I +R+ ++S Y+ +F Sbjct: 4 FAFLSDTFLKL-SAALPVTLGLFISAFLCGGLLALGILTLRMS-RWRVLSGFARGYILVF 61 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RG+PLL+QLF+I+YGL G++ SFV +++L+L +AY +EI+R ++++ Sbjct: 62 RGSPLLIQLFLIYYGLGQFGVIRHSFVWPFLREPFICAVLALSLCTAAYTAEILRGALLA 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P GQ +A A G++R +R II P + + S+E I ++KST++AS +T+ ++ Sbjct: 122 VPPGQVEAGLACGMSRGLLLRRIIAPIMLRYALPAYSTEAILLVKSTALASLVTVWDVTG 181 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 AQ+I+ TY+ + ++ A +YLIL Sbjct: 182 VAQQIIQRTYRTMEVFLCAAAIYLILN 208 >gi|157826658|ref|YP_001495722.1| amino acid ABC transporter permease [Rickettsia bellii OSU 85-389] gi|157801962|gb|ABV78685.1| Amino acid ABC transporter permease protein [Rickettsia bellii OSU 85-389] Length = 218 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 122/207 (58%), Gaps = 7/207 (3%) Query: 5 WFNLIIDSFPQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 F +I P++L+ ++TL + I+ + L+IG +A+ ++ + + L FY Sbjct: 1 MFEYLIKFSPKILFIVEGTLITLKYSVIAVIFGLVIGVLLALCKVN-KNRALRLFADFYT 59 Query: 63 WIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 IFRGTPLL+QL +I++ P+ IGI F F+A IS +LN AY+SE+IR+ I ++ KGQ Sbjct: 60 SIFRGTPLLIQLSIIYFASPYLIGIKFTVFMAGAISFSLNSGAYVSEVIRAGINAVDKGQ 119 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++A+ A+ + + ++ IILPQ I L++E I+++K +++ S ++ + AQ + Sbjct: 120 FEAAEALAIPKFLIMKDIILPQAIKNIFPSLTNELINLIKESAIISMFGEMDLMKRAQIV 179 Query: 182 VSTTYQ---PLIIYCELAFVYLILTSF 205 TY P+I+ ++ ++L SF Sbjct: 180 SLETYNYFSPMIVAACCYYILVMLISF 206 >gi|323464072|gb|ADX76225.1| glutamine-binding periplasmic protein [Staphylococcus pseudintermedius ED99] Length = 486 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 109/187 (58%), Gaps = 6/187 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVI 77 I T+ I+ I V+ + G A+++I TI L Y+ RGTPLLVQ+F++ Sbjct: 285 GIKSTIVISLIGVVLGAVFGSMFALMKI---STIRPLKWFASAYIEFLRGTPLLVQVFLV 341 Query: 78 FYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 F+G + G+ +F+ I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL+ QTI Sbjct: 342 FFGTTAVLGLDISAFICGAIALVINCSAYIAEIIRAGINAVDKGQMEAARSLGLSYSQTI 401 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 + +I+PQ I L +EF++++K +S+ S I + EI AQ + ++ P A Sbjct: 402 KSVIMPQAIKKILPALGNEFVTVIKESSIVSVIGVSEIMFNAQVVQGASFDPFTPLLIAA 461 Query: 197 FVYLILT 203 +Y ILT Sbjct: 462 VLYFILT 468 >gi|311695924|gb|ADP98797.1| amino acid ABC transporter, inner membrane subunit [marine bacterium HP15] Length = 240 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 119/217 (54%), Gaps = 10/217 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + +V T+ + +S VI L++ +A++R + +S + Y ++FRGTPLL+QL++I Sbjct: 24 WDGMVTTVHLVFLSLVIGLLVAVPLAILRTV-RNPFVSGPVWLYTYLFRGTPLLIQLYII 82 Query: 78 FYGLPHIG---------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +YGL I I + F +++ TLN +AY +EIIR +IIS P G+ +A+ A Sbjct: 83 YYGLAQIEGIQETFWWEIFREPFYPALLAFTLNTAAYTTEIIRGAIISTPNGEIEAAKAY 142 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+ +R I+LP + S+E I +L ++++AS +TI ++ A+ I S Y P Sbjct: 143 GMNWFMRMRRIVLPSAARRAVQAYSNEVIFMLHASAIASVVTIVDLTGAARNIYSRFYAP 202 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + +A Y+ LT K+E+ + +H V+ Sbjct: 203 FDAFIFVALCYMALTFILVFAFRKLETHLLKHQRPVN 239 >gi|329295877|ref|ZP_08253213.1| glutamine ABC transporter permease protein [Plautia stali symbiont] Length = 219 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 126/219 (57%), Gaps = 5/219 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W ++I P L+ A +TL I+ + + L+IG R + I + I Sbjct: 1 MEFDW-SVIWPVLPILIEGA-KMTLLISILGLIGGLVIGLVAGFARAY-GGWITNNIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIELIRGTPIVVQVMFIYFALPMAFPDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIN 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R++T+R++I+P + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSRRETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 Q I++ ++ L I+ +A +YL++T + +IE V Sbjct: 178 QEIIAGNFRALEIWSAVAIIYLVITLVLSFVLRRIEKRV 216 >gi|227501796|ref|ZP_03931845.1| ABC superfamily ATP binding cassette transporter [Corynebacterium accolens ATCC 49725] gi|227077821|gb|EEI15784.1| ABC superfamily ATP binding cassette transporter [Corynebacterium accolens ATCC 49725] Length = 317 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 75/220 (34%), Positives = 127/220 (57%), Gaps = 23/220 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F Q + A + T+ I +S +I ++ G +AV+R+ + I+ I ++WIFRGTP+ V Sbjct: 65 FDQRIAIASLHTIAITILSMIIGVVGGAILAVMRMS-PNPILRAISWIFLWIFRGTPIYV 123 Query: 73 QLFVIFYGLP-------HIG--------IVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 QL +F+GL ++G ++ ++F ++ L LN +AY++EI+RS I S+ Sbjct: 124 QL--VFWGLLSAIYQSINLGFAEVSLQSVLTNAFFLAVMGLGLNEAAYMAEIVRSGISSV 181 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP---EI 174 P+GQ +AS A+G++ T+R +LPQ + P +EFIS+LK++S+ + IP EI Sbjct: 182 PEGQKEASKALGMSWWMTMRRTVLPQAMRIIIPPTGNEFISLLKTSSL--VVAIPYTHEI 239 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 F A I + +QP+ + A YL++TS + Q +E Sbjct: 240 FGRATDISAALFQPIPLLMVAASWYLVITSLLMVGQYFLE 279 >gi|16802888|ref|NP_464373.1| hypothetical protein lmo0847 [Listeria monocytogenes EGD-e] gi|16410235|emb|CAC98925.1| lmo0847 [Listeria monocytogenes EGD-e] Length = 480 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 124/217 (57%), Gaps = 3/217 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 + +I S+P LL + + +T+ +A +S +I+ IIG +++ S I+ I YV I Sbjct: 266 FMGIIKSSWPALL-SGLWLTIRLAVVSLIIAFIIGITFGFMKVSNS-KILRGIATVYVDI 323 Query: 65 FRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTPL+VQ F ++G+P + F+A +I+L+LN AY+ EI+R I S+ KGQ + Sbjct: 324 FRGTPLIVQAFFFYFGIPAALDFRMPVFLAGVIALSLNAGAYMVEIVRGGIQSVDKGQME 383 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++GL K+ + ++LPQ I ++F+ LK TS+ S I + E+ Q+ + I++ Sbjct: 384 AARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQSGKIIMA 443 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T++ + + +YLI+ + I ++E + Sbjct: 444 RTFESTWTWLIIGIMYLIVITILTKISDRLERRLRND 480 >gi|304405413|ref|ZP_07387072.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] gi|304345452|gb|EFM11287.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] Length = 236 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 120/208 (57%), Gaps = 15/208 (7%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I ++F +LL +A+ TL I +S ++ +IG A++R++ ++ I FYV RGT Sbjct: 8 IAEAFWKLL-SALPTTLLITVVSVLLGFLIGAVTALLRVY-RVPVLHPIASFYVKFIRGT 65 Query: 69 PLLVQLFVIFYGLPHI--------GIVFDS-----FVAIIISLTLNFSAYISEIIRSSII 115 P+L+ LF+I++GLP + G F S V ++I+ ++ AY+SEI+RS ++ Sbjct: 66 PMLMHLFLIYFGLPKLIDWLSASFGWSFTSVQIPILVFVLIAFSITAGAYMSEIVRSGML 125 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ +GQ +A+ ++G+TR Q IR I+ PQ + S LS+ I +L ++VA T+ + E+F Sbjct: 126 AVDRGQLEAALSVGMTRTQAIRRIVFPQALAVSLPNLSNALIGMLHGSTVAFTVPVIEVF 185 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 A + T ++ + A +Y LT Sbjct: 186 GQANIVAMTNWKYFEAFIAAAIIYWALT 213 >gi|330957236|gb|EGH57496.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 229 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 123/207 (59%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +II P+L A +TL + I+ + LI+ + + R + +L + Y++ F Sbjct: 3 WEVIIKWLPRLAQGA-TLTLELVAIAVIAGLILAIPMGIARASRHWPVRAL-PYAYIFFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+++YGL V D F +I++TL+ +AYI+EI+R +I + Sbjct: 61 RGTPLLVQLFLVYYGLAQFDAVRQGPLWPYLRDPFWCAVITMTLHTAAYIAEILRGAIQA 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P G+ +A+ A+G+++ + + +I+LP+ S+E I +LK++++AST+T+ E+ Sbjct: 121 VPVGEVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I++ TY P+ I+ YL++T Sbjct: 181 MARTIIARTYLPVEIFFAAGMFYLVMT 207 >gi|242240517|ref|YP_002988698.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242132574|gb|ACS86876.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 245 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 56/156 (35%), Positives = 95/156 (60%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEI 109 S +I + H YV R TP+L+Q+F++F+ LP IGI ++F A +++L +N AY+SE Sbjct: 47 SVALIRWLSHVYVEFIRNTPVLLQIFIVFFALPSIGITLNAFTAGVLALGINVGAYLSET 106 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R+ I S+PKGQ +A++ +G+ R+Q H++LPQ + + I +L TS+ S I Sbjct: 107 FRAGIQSVPKGQLEAAWILGMPRRQMFLHVVLPQAARAVWPAIINNLIQLLLGTSLLSAI 166 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSF 205 +PE+ TA I + T + + +A +YL+L++ Sbjct: 167 ALPELTGTATVINARTLLYIQTFSVVALIYLLLSNL 202 >gi|16264422|ref|NP_437214.1| putative amino acid uptake ABC transporter permease protein [Sinorhizobium meliloti 1021] gi|15140559|emb|CAC49074.1| ABC transporter, permease [Sinorhizobium meliloti 1021] Length = 290 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 72/227 (31%), Positives = 123/227 (54%), Gaps = 18/227 (7%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + A + TL + + + +++G IA++RI + ++SLI Y+W+FRG P L+ Sbjct: 63 FAPAILAGLYNTLLMTVAAMGLGIVLGVVIAIMRIS-GNPVLSLIAIGYIWVFRGAPALL 121 Query: 73 QLFVIF--------YGLPHIGI-------VFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 QL + F +G+P G+ V FVA ++ L ++ AY SE++RS ++S+ Sbjct: 122 QLMLWFNLALIFPTFGIP--GLFEFRTVDVMTPFVAAVLGLGISQGAYTSEVVRSGLLSV 179 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQ++A+ IG+T+ + +R I+LPQ + P+ +E I ++K TS+AS I EI Sbjct: 180 DSGQYEAARTIGMTQMKMLRRIVLPQAMRVMVPPVGNEVIGMVKLTSLASVIQYSEILHN 239 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 AQ I + L + +F YL++ S I Q IE + + S+ Sbjct: 240 AQIIYFANTRVLELLLVASFWYLLVVSVLSIGQHYIERYFGRGSKSI 286 >gi|186470876|ref|YP_001862194.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184197185|gb|ACC75148.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 220 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/194 (34%), Positives = 111/194 (57%), Gaps = 4/194 (2%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII-SLIMHFYVWIFRGTPLL 71 PQLL A+ TL ++ + G FI + SD+ + + YV +FRGTP+L Sbjct: 14 LPQLLDGALT-TLWLSAAAVFCGFFAGLFIYTMSA--SDSPLPAGAARVYVSVFRGTPVL 70 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 QL V++Y +G+ VA I L++N +AY S+I+ + SI +GQ +A+ LT Sbjct: 71 AQLLVMYYLPSALGLALPGIVAAAIGLSMNTAAYQSQILGAGFRSIARGQIEAAVTFNLT 130 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 R+Q + HI +PQ + + L SE I I+K+++V S I++ ++ + Q++ S+TY+PL + Sbjct: 131 RRQVLWHIEVPQVVRVTLPALVSEMIDIVKASAVVSVISVTDLMRVGQQLSSSTYRPLEV 190 Query: 192 YCELAFVYLILTSF 205 Y A YL +T+ Sbjct: 191 YTCAALFYLAITTL 204 >gi|121593168|ref|YP_985064.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax sp. JS42] gi|120605248|gb|ABM40988.1| amino acid ABC transporter membrane protein, PAAT family [Acidovorax sp. JS42] Length = 217 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/186 (33%), Positives = 116/186 (62%), Gaps = 9/186 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + I+ V+++ +G +A++R+ + S ++ Y+W+ RGTPL++Q+ I++ LP Sbjct: 17 VTLKLFFITLVLAVPLGLALALMRLSRWKAL-SGAVNGYIWLMRGTPLMLQMLFIYFALP 75 Query: 83 H---IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 IG+ F A + + LN++AY +EI R+ I S+ +GQ++A+ +G++ QT+R I Sbjct: 76 FVPVIGVRLPDFPAAVAAFALNYAAYFAEIFRAGIQSVDRGQYEAAKVLGMSYGQTMRRI 135 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST--TYQPLIIYCELAF 197 +LPQ + + P+S+E I+++K TS+ + + ++ + A+ IV T P I+ AF Sbjct: 136 VLPQMVRSILPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDFTTTPFIVAA--AF 193 Query: 198 VYLILT 203 YL++T Sbjct: 194 -YLVMT 198 >gi|91205978|ref|YP_538333.1| amino acid ABC transporter permease [Rickettsia bellii RML369-C] gi|122425299|sp|Q1RHC0|GLNP_RICBR RecName: Full=Putative glutamine transport system permease protein glnP gi|91069522|gb|ABE05244.1| Amino acid ABC transporter permease protein [Rickettsia bellii RML369-C] Length = 218 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 122/207 (58%), Gaps = 7/207 (3%) Query: 5 WFNLIIDSFPQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 F +I P++L+ ++TL + I+ + L+IG +A+ ++ + + L FY Sbjct: 1 MFEYLIKFSPKILFIVEGTLITLKYSVIAVIFGLVIGVLLALCKVN-KNRALRLFADFYT 59 Query: 63 WIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 IFRGTPLL+QL +I++ P+ IGI F F+A IS +LN AY+SE+IR+ I ++ KGQ Sbjct: 60 SIFRGTPLLIQLSIIYFASPYLIGIKFTVFMAGAISFSLNSGAYVSEVIRAGINAVDKGQ 119 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++A+ A+ + + ++ IILPQ I L++E I+++K +++ S ++ + AQ + Sbjct: 120 FEAAEALAIPKFLIMKDIILPQAIKNIFPSLTNELINLIKESAIISMFGEMDLMKRAQIV 179 Query: 182 VSTTYQ---PLIIYCELAFVYLILTSF 205 TY P+I+ ++ ++L SF Sbjct: 180 SLETYNYFFPMIVAACCYYILVMLISF 206 >gi|331702001|ref|YP_004398960.1| polar amino acid ABC transporter inner membrane subunit [Lactobacillus buchneri NRRL B-30929] gi|329129344|gb|AEB73897.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus buchneri NRRL B-30929] Length = 221 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/222 (30%), Positives = 122/222 (54%), Gaps = 17/222 (7%) Query: 4 EWFN--LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF- 60 ++FN L S P++L A +++ + ISF++SLI+G F+ + ++ ++H+ Sbjct: 11 DFFNAPLAFRSIPRIL-AGFPMSIGLTAISFILSLILGLFLTLAQLSHHK-----LLHYP 64 Query: 61 ---YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 ++ RG P+LV LF+I++G D+ A +I+ T+N SA++SE+ RSS ++ Sbjct: 65 ARAFISFMRGVPMLVLLFIIYFGFRA-----DALPAAVIAFTINCSAFVSEVYRSSFSAV 119 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQW+A+Y++GL ++ I I+ PQ + L + + + K TS+A+ IT+ E+F Sbjct: 120 DHGQWEAAYSLGLPYRKVISKIVFPQAFRIAIPALGNILLDLFKGTSLAAMITVSEMFMD 179 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 AQ + + IY +A VY I Q ++E + + Sbjct: 180 AQIVAGANQDYMTIYITIAVVYWFFCWLMTIGQTQLERELAR 221 >gi|329922570|ref|ZP_08278145.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Paenibacillus sp. HGF5] gi|328942114|gb|EGG38396.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Paenibacillus sp. HGF5] Length = 217 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/186 (34%), Positives = 107/186 (57%), Gaps = 30/186 (16%) Query: 25 LPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF-------------------YVWIF 65 +P + I F+ +L+ G I +I FFS I++++M F YV +F Sbjct: 1 MPNSWIDFLPTLLKGAEITIIVAFFS-AILAIVMSFAAGLCRLSKLWIVRTATVVYVEVF 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGT LLVQLF +++ LP IGI +A I+++ LNF AY SEI+RS+++++PKGQW+A+ Sbjct: 60 RGTSLLVQLFWLYFALPFIGIELPKMLAAILAIGLNFGAYGSEIVRSAVLAVPKGQWEAA 119 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+ + Q + ++ILPQ P ++ + ++KSTS+ IT+ ++ T Sbjct: 120 VALNMRPWQRLWNVILPQASLRMLPPFGNQLVELIKSTSLVYFITMADL----------T 169 Query: 186 YQPLII 191 YQ +++ Sbjct: 170 YQAMVL 175 >gi|226323073|ref|ZP_03798591.1| hypothetical protein COPCOM_00845 [Coprococcus comes ATCC 27758] gi|225208640|gb|EEG90994.1| hypothetical protein COPCOM_00845 [Coprococcus comes ATCC 27758] Length = 229 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 116/205 (56%), Gaps = 15/205 (7%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHFYV 62 N I D + + VTL + + +I +++GF +A++R + T +++LI Y+ Sbjct: 11 NFIKDDRWHYIADGLKVTLIVTFCAVLIGVVLGFLLAIVRSTYDKTGKLKLLNLICQIYI 70 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSF-----VAIIISLTLNFSAYISEIIRSSIISI 117 + RGTP++VQL +I++ ++F S + I++ +N SAY++EI RS I+++ Sbjct: 71 TVIRGTPVVVQLLIIYF------VIFASVDVSKTIVAILAFGMNSSAYVAEIFRSGIMAV 124 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQ++A ++G +QT+ +II+PQ L +EFI +LK TSVA I + ++ + Sbjct: 125 DNGQFEAGRSLGFNYRQTMIYIIMPQAFKNVLPALGNEFIVLLKETSVAGYIALQDLTKG 184 Query: 178 AQRIVSTTYQPLIIYCELAFVYLIL 202 I S TY L+ +A +YL++ Sbjct: 185 GDIIRSRTYDALMPLMAVAIIYLVM 209 >gi|157964196|ref|YP_001499020.1| amino acid ABC transporter permease [Rickettsia massiliae MTU5] gi|157843972|gb|ABV84473.1| Amino acid ABC transporter permease protein [Rickettsia massiliae MTU5] Length = 218 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 122/207 (58%), Gaps = 7/207 (3%) Query: 5 WFNLIIDSFPQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 F +I +P++ + +VTL + I+ + L+IG +A+ ++ + + L +FY Sbjct: 1 MFEYLIKFYPKIFFIVEGTLVTLKYSVIAVIFGLVIGMLLAICKVN-KNRALRLFANFYT 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 IFRGTPLL+QL +I++ P+I G+ F F+A IS +LN AY+SE+IR+ I ++ KGQ Sbjct: 60 SIFRGTPLLIQLSIIYFASPYIIGVKFSVFMAGAISFSLNSGAYVSEVIRAGINTVDKGQ 119 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++A+ A+ + + + IILPQ + L +E ++++K +++ S + ++ + AQ + Sbjct: 120 FEAAEALAIPKFLITKDIILPQAVKNIFPSLVNELVNLIKESAIISMLGEMDLMRRAQIV 179 Query: 182 VSTTYQ---PLIIYCELAFVYLILTSF 205 TY P++I ++ ++L SF Sbjct: 180 SIETYNYFFPMLIAACCYYILVMLISF 206 >gi|91780137|ref|YP_555344.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91692797|gb|ABE35994.1| hydroxyectoine ABC transporter membrane protein / ectoine ABC transporter membrane protein [Burkholderia xenovorans LB400] Length = 219 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/187 (30%), Positives = 113/187 (60%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + + P LL + +T+ + +++ ++G A++R+ + + S I Sbjct: 1 MEWDW-SFAREILPILLQG-LKITVLATLLGAIVAAVVGMVFAILRLSPNRAVAS-ITTA 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + RGTPLLVQL+++FY LP IG+ + A +++L ++++ Y +E+ R+ I ++P+G Sbjct: 58 VVSVIRGTPLLVQLYLVFYVLPDIGVRMPALAAGVLALGVHYATYAAEVYRAGIENVPRG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A L+ Q+ +H+ILP+ + L++ IS+ K T + S IT+ E+ A+ Sbjct: 118 QWEAAKACNLSPAQSWQHVILPEAVPPMLPALANYLISMFKETPLLSAITVLELMNEAKI 177 Query: 181 IVSTTYQ 187 + +T Y+ Sbjct: 178 VANTDYR 184 >gi|116628198|ref|YP_820817.1| ABC-type amino acid transport system, periplasmic and permease components [Streptococcus thermophilus LMD-9] gi|116101475|gb|ABJ66621.1| ABC-type amino acid transport system, periplasmic and permease components [Streptococcus thermophilus LMD-9] Length = 736 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 116/204 (56%), Gaps = 9/204 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 LI +++ QLL + +SF I++IIG ++ + + T+ +I +V + RG Sbjct: 521 LIKNNYKQLLQGLGITLGLTL-LSFAIAMIIGIIFGMMAVAPNKTL-RVISQIFVDVVRG 578 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ I++G+P++ + FVA I+L+LN AYI+EI+R I ++P G Sbjct: 579 IPLMIVAAFIYWGIPNLIENITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPIG 638 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G+ T+R IILPQ + ++F+ LK T++ S I + E+FQT + Sbjct: 639 QMEASRSLGVPYNTTMRKIILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKI 698 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 I++ YQ +Y LA +YL++ + Sbjct: 699 IIARNYQSFRMYAILAIIYLVIIT 722 >gi|148974813|ref|ZP_01811793.1| amino acid ABC transporter, permease protein [Vibrionales bacterium SWAT-3] gi|145965322|gb|EDK30571.1| amino acid ABC transporter, permease protein [Vibrionales bacterium SWAT-3] Length = 265 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/192 (35%), Positives = 118/192 (61%), Gaps = 4/192 (2%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 +P L ++VT+ I+ IS V +L+IG A++R S + + YV + R TPLLV Sbjct: 56 WPAELMEGLLVTINISLISLVATLVIGLTTALLRNSHS-VVGRTLATSYVELIRNTPLLV 114 Query: 73 QLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 Q++++++ P IG+ D F +++L L AY +EI R+ + SI KGQ++A+ ++GL+ Sbjct: 115 QIYLLYFVFGPVIGL--DRFSTAVLALALFQGAYTAEIFRAGLNSISKGQFEAAQSLGLS 172 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 + T +ILPQ + + PL++E IS++K++S+ S + I ++ A+ IVS T P I Sbjct: 173 KTYTYWDVILPQVVQRTLPPLTNEVISLIKNSSIVSVMAIFDLTTEARNIVSETAMPFEI 232 Query: 192 YCELAFVYLILT 203 + +A +YL LT Sbjct: 233 WFSVAIIYLALT 244 >gi|51244880|ref|YP_064764.1| glutamine ABC transporter, permease protein [Desulfotalea psychrophila LSv54] gi|50875917|emb|CAG35757.1| probable glutamine ABC transporter, permease protein [Desulfotalea psychrophila LSv54] Length = 221 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/196 (32%), Positives = 110/196 (56%), Gaps = 1/196 (0%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 S + L+ G I +R+F + + + + Y +FRG PL+VQLF+++YGLP+IGI D+ Sbjct: 27 SAIFGLLGGVVIGTLRVF-GNAPVRRLFNIYASVFRGVPLMVQLFILYYGLPNIGIYLDA 85 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 + A +I L SAY SE IR ++ +I GQ A A+G+++ QTI I++PQ + Sbjct: 86 YGAAVIGFILCSSAYNSEYIRGALQAIKSGQLKAGAALGMSKVQTIVWIVIPQAFRKALP 145 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 +E I ++K +S+A ++ E+ A+ I S T++ + +A YLIL + I Sbjct: 146 GCGNEVIYLIKYSSLAYIVSCIELTGEARAIASQTFRFTEAFTVVACYYLILVTIASYIL 205 Query: 211 IKIESSVTQHTYSVDK 226 ++E + + + K Sbjct: 206 KRVEKRLEIPGFGIVK 221 >gi|291618613|ref|YP_003521355.1| YckJ [Pantoea ananatis LMG 20103] gi|291153643|gb|ADD78227.1| YckJ [Pantoea ananatis LMG 20103] Length = 245 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 124/208 (59%), Gaps = 11/208 (5%) Query: 1 MKYEWFNLI--IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL-- 56 M+Y+W L D+F AA +TL + ++F+++L++G A+ + S T L Sbjct: 1 MRYQWLTLWQYADTF----LAATWLTLQVTLLAFMLALVLGLLAALAK---SATFAPLRW 53 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + H YV R TP+L+Q+F++F+GLP +GI +F A +++L +N AY++E+ R+ I S Sbjct: 54 LSHGYVEFIRNTPVLLQIFIVFFGLPSLGITMSAFTAGVLALGINVGAYLAEVFRAGIQS 113 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +PKGQ +A++ +G++R+Q ++++PQ + + I +L TS+ S I +PE+ Sbjct: 114 VPKGQLEAAWILGISRRQRFLNVVMPQAARAVWPAIINNLIQLLLGTSLLSAIALPELTG 173 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTS 204 TA I + T + + +A VYL L++ Sbjct: 174 TATVINARTLLYIQTFSVVALVYLFLSN 201 >gi|237730788|ref|ZP_04561269.1| glutamine ABC transporter permease [Citrobacter sp. 30_2] gi|226906327|gb|EEH92245.1| glutamine ABC transporter permease [Citrobacter sp. 30_2] Length = 219 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 123/219 (56%), Gaps = 5/219 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P L+ A +TL I+ + LIIG R F I + + Sbjct: 1 MQFDW-SAIWPAIPLLIEGA-KMTLWISVLGLAGGLIIGLAAGFARTF-GGWIANHVALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R +TIRH+ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFSEAGLALGLSRTETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 Q I++ ++ L I+ +A YLI+T I ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRM 216 >gi|55821477|ref|YP_139919.1| glutamine ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55823406|ref|YP_141847.1| glutamine ABC transporter permease [Streptococcus thermophilus CNRZ1066] gi|55737462|gb|AAV61104.1| glutamine ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55739391|gb|AAV63032.1| glutamine ABC transporter permease protein [Streptococcus thermophilus CNRZ1066] gi|312278815|gb|ADQ63472.1| Glutamine ABC transporter permease protein [Streptococcus thermophilus ND03] Length = 736 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 117/204 (57%), Gaps = 9/204 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 LI +++ QLL + +SF I++IIG ++ + + T+ +I +V + RG Sbjct: 521 LIKNNYKQLLQGLGITLGLTL-LSFAIAMIIGIIFGMMAVAPNKTL-RVISQIFVDVVRG 578 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ I++G+P++ ++FVA I+L+LN AYI+EI+R I ++P G Sbjct: 579 IPLMIVAAFIYWGIPNLIENITGHQSPINNFVAATIALSLNGGAYIAEIVRGGIEAVPIG 638 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G+ T+R +ILPQ + ++F+ LK T++ S I + E+FQT + Sbjct: 639 QMEASRSLGVPYNTTMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKI 698 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 I++ YQ +Y LA +YL++ + Sbjct: 699 IIARNYQSFRMYAILAIIYLVIIT 722 >gi|15601991|ref|NP_245063.1| arginine transporter permease subunit ArtM [Pasteurella multocida subsp. multocida str. Pm70] gi|12720339|gb|AAK02210.1| ArtM [Pasteurella multocida subsp. multocida str. Pm70] Length = 227 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 119/209 (56%), Gaps = 13/209 (6%) Query: 21 IVVTLPIACISFVISLIIGFFIAVIRIF---FSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 I +P + + +SL++ FF+A++ F + ++ +H Y+ +F GTPLLVQ F+I Sbjct: 9 IAQGIPTSLLLTFVSLVVAFFLALLLTFGLSIGNKLVKCGIHTYLTLFTGTPLLVQFFLI 68 Query: 78 FYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 + G + DS + +++L LN +AY + + ++ +I KGQW++ A+ Sbjct: 69 YAGPGQFEWLVDSALWPLLSNAWFCAMLTLALNSAAYSTLLFHGAVKAISKGQWESCAAL 128 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLTR +T++ I++P + + S+E I + K T++ASTITI +I A+++ T Y Sbjct: 129 GLTRMETLK-ILIPYALKRALPSYSNEIILVFKGTALASTITIMDIMGYARQLYGTEYDA 187 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSV 217 L IY +YLI+T+ ++ K+ES V Sbjct: 188 LTIYGIAGMIYLIITAIATLLLRKLESKV 216 >gi|47094853|ref|ZP_00232467.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|254898981|ref|ZP_05258905.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes J0161] gi|254911531|ref|ZP_05261543.1| glutamine ABC transporter [Listeria monocytogenes J2818] gi|254935857|ref|ZP_05267554.1| glutamine ABC transporter [Listeria monocytogenes F6900] gi|47016735|gb|EAL07654.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|258608445|gb|EEW21053.1| glutamine ABC transporter [Listeria monocytogenes F6900] gi|293589477|gb|EFF97811.1| glutamine ABC transporter [Listeria monocytogenes J2818] Length = 480 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 124/217 (57%), Gaps = 3/217 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 + +I S+P LL + + +T+ +A +S +I+ IIG +++ S I+ I YV I Sbjct: 266 FMGIIKSSWPALL-SGLWLTIRLAVVSLIIAFIIGITFGFMKVSNS-KILRGIATVYVDI 323 Query: 65 FRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTPL+VQ F ++G+P + F+A +I+L+LN AY+ EI+R I S+ KGQ + Sbjct: 324 FRGTPLIVQAFFFYFGIPAALDFRMPVFLAGVIALSLNAGAYMVEIVRGGIQSVDKGQME 383 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++GL K+ + ++LPQ I ++F+ LK TS+ S I + E+ Q+ + I++ Sbjct: 384 AARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQSGKIIMA 443 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T++ + + +YLI+ + I ++E + Sbjct: 444 RTFESTWTWLIIGIMYLIVITILTKISDRLERRLRND 480 >gi|260461828|ref|ZP_05810074.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|319785358|ref|YP_004144834.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|259032469|gb|EEW33734.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|317171246|gb|ADV14784.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 324 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 126/216 (58%), Gaps = 5/216 (2%) Query: 3 YEWFNL----IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 ++ FNL I ++ P L+ V T+ I+ +S + + II A+ ++ S+ I Sbjct: 101 FKSFNLSMPFIWENLPYLITQGAVTTIYISAVSLIFASIIAMIAAIAKLS-SNGFAYAIA 159 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 FY FRG PLLVQ+++I+ GLP +GI ++ + +++L+L AY++EI R+ I SI Sbjct: 160 SFYTSFFRGLPLLVQIYLIYLGLPQLGIFINAVPSGVLALSLCTGAYMTEIFRAGIQSID 219 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW+AS ++G T+R IILPQ + P+ + FIS+LK +S+ S + + E+ A Sbjct: 220 RGQWEASRSMGFGFGLTMRRIILPQALPVIIPPMGNTFISMLKDSSLVSILGVWELTFLA 279 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + + T+Q + + A +Y I++ ++Q +IE Sbjct: 280 RTLGQPTFQHMEMLITAAIIYWIMSICLELVQSRIE 315 >gi|255656164|ref|ZP_05401573.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-23m63] gi|296450402|ref|ZP_06892158.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP08] gi|296879475|ref|ZP_06903469.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP07] gi|296260663|gb|EFH07502.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP08] gi|296429621|gb|EFH15474.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP07] Length = 222 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/184 (36%), Positives = 110/184 (59%), Gaps = 6/184 (3%) Query: 42 IAVIRIFFSDT---IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDS--FVAII 95 + VI FF+ T I+ I YV FRGTPLL+Q+F ++G P + + D ++AI+ Sbjct: 37 LGVILAFFTQTKSKILQYITRVYVSFFRGTPLLIQIFFFYFGFPMVFSFMKDCSPYLAIV 96 Query: 96 ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSE 155 I L +N SAY++EIIR+SI S+ KGQ +A YA GL++ Q++ IILPQ T++ P+ S Sbjct: 97 ICLGVNSSAYMAEIIRASIESVDKGQQEACYAFGLSKYQSMVKIILPQAATSAVPPIVSC 156 Query: 156 FISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + I+K +S+ TI I ++ AQ +++++ IY +Y ++ IQ K+E Sbjct: 157 TLDIIKGSSLGLTIGIQDLMGVAQVEAASSFKYFEIYMVTILIYWAVSIMLSNIQSKVEK 216 Query: 216 SVTQ 219 + + Sbjct: 217 RIGK 220 >gi|319762081|ref|YP_004126018.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC] gi|317116642|gb|ADU99130.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans BC] Length = 221 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/191 (34%), Positives = 113/191 (59%), Gaps = 2/191 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL A VVT+ + +SF++S IG +A+ ++ +S+ + + RG P++V Sbjct: 12 LPILLQGA-VVTVQVTVLSFLLSSAIGLVLALGKLS-PVRAVSVCASTVINVIRGLPIIV 69 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I++ LP IGI +F A +I L + +SAY +E R+ I ++ GQ +A+ A+G+ Sbjct: 70 QLFYIYFVLPDIGIQLSAFQAGVIGLGIAYSAYQAENFRAGIEAVDPGQREAALAMGMRP 129 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +R +ILPQ + P + + +LK +S+ STIT+ E+ + Q I S+T+Q + +Y Sbjct: 130 ALLMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAGQLIASSTFQNMTVY 189 Query: 193 CELAFVYLILT 203 +A +YL ++ Sbjct: 190 TLVALLYLAMS 200 >gi|323529255|ref|YP_004231407.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323386257|gb|ADX58347.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 238 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 110/190 (57%), Gaps = 13/190 (6%) Query: 1 MKYEWFNLI--IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL-- 56 M YEW L ++ F + A +TL + ++FV+++++G A+ S + +SL Sbjct: 1 MSYEWITLAGYLNDFVR----ASWLTLQVTLLAFVLAMLLGLLTALA----SASRVSLLR 52 Query: 57 -IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 I Y+ R TP+L+Q+F++F+GLP +GI +++ A +I+L +N AY++E+ R+ I Sbjct: 53 GIASVYIEAIRNTPVLLQIFIVFFGLPSLGITLNAYTAGVIALGVNVGAYLAEVFRAGIQ 112 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+P+GQ +A+ +GL R Q ++LPQ + + I +L TS+ S I +PE+ Sbjct: 113 SVPRGQVEAASILGLERSQIFMEVVLPQAARAVYPAIVNNLIQLLLGTSLLSAIALPELS 172 Query: 176 QTAQRIVSTT 185 TA I + T Sbjct: 173 GTATVINART 182 >gi|167031321|ref|YP_001666552.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166857809|gb|ABY96216.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 229 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 121/207 (58%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +I P+L A +TL + I+ V LI+ + + R + + Y++ F Sbjct: 3 WEVIFKWLPRLAEGA-TLTLELVAIAVVAGLILAIPLGIARSS-RHWYVRAVPFSYIFFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+++YGL V D F ++++TL+ +AYI+EI+R ++ S Sbjct: 61 RGTPLLVQLFLVYYGLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQS 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKG+ +A+ A+G++R + + +I+LP+ S+E I +LK++++AST+T+ E+ Sbjct: 121 IPKGEIEAARALGMSRGKALFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I++ TY P+ I+ YL+++ Sbjct: 181 MARTIIARTYLPVEIFFAAGVFYLVIS 207 >gi|47092054|ref|ZP_00229847.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes str. 4b H7858] gi|226223465|ref|YP_002757572.1| Glutamine ABC transporter (binding and transport protein) [Listeria monocytogenes Clip81459] gi|254823885|ref|ZP_05228886.1| glutamine ABC transporter [Listeria monocytogenes FSL J1-194] gi|254852338|ref|ZP_05241686.1| glutamine ABC transporter [Listeria monocytogenes FSL R2-503] gi|254931228|ref|ZP_05264587.1| glutamine ABC transporter [Listeria monocytogenes HPB2262] gi|254993068|ref|ZP_05275258.1| Glutamine ABC transporter (binding and transport protein) [Listeria monocytogenes FSL J2-064] gi|300765789|ref|ZP_07075764.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes FSL N1-017] gi|47019494|gb|EAL10234.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes str. 4b H7858] gi|225875927|emb|CAS04631.1| Putative Glutamine ABC transporter (binding and transport protein) [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605645|gb|EEW18253.1| glutamine ABC transporter [Listeria monocytogenes FSL R2-503] gi|293582776|gb|EFF94808.1| glutamine ABC transporter [Listeria monocytogenes HPB2262] gi|293593110|gb|EFG00871.1| glutamine ABC transporter [Listeria monocytogenes FSL J1-194] gi|300513483|gb|EFK40555.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes FSL N1-017] gi|328467121|gb|EGF38211.1| Glutamine ABC transporter (binding and transport protein) [Listeria monocytogenes 1816] gi|328475546|gb|EGF46305.1| Glutamine ABC transporter (binding and transport protein) [Listeria monocytogenes 220] gi|332311253|gb|EGJ24348.1| Glutamine transport system permease protein glnP [Listeria monocytogenes str. Scott A] Length = 480 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 124/217 (57%), Gaps = 3/217 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 + +I S+P LL + + +T+ +A +S +I+ IIG +++ S I+ I YV I Sbjct: 266 FMGIIKSSWPALL-SGLWLTIRLAVVSLIIAFIIGITFGFMKVSNS-KILRGIATVYVDI 323 Query: 65 FRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTPL+VQ F ++G+P + F+A +I+L+LN AY+ EI+R I S+ KGQ + Sbjct: 324 FRGTPLIVQAFFFYFGIPAALDFRMPVFLAGVIALSLNAGAYMVEIVRGGIQSVDKGQME 383 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++GL K+ + ++LPQ I ++F+ LK TS+ S I + E+ Q+ + I++ Sbjct: 384 AARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQSGKIIMA 443 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T++ + + +YLI+ + I ++E + Sbjct: 444 RTFESTWTWLIIGIMYLIVITILTKISDRLERRLRND 480 >gi|190895200|ref|YP_001985493.1| nopaline ABC transporter permease [Rhizobium etli CIAT 652] gi|190700861|gb|ACE94943.1| nopaline ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 231 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 115/201 (57%), Gaps = 14/201 (6%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + P+ L + +T FV+S+ +GF A + S +++ Y + FRGTPLL Sbjct: 12 TLPRGLILTLALTFASLAAGFVVSIPLGFLRASSNPWASAPVLA-----YTYCFRGTPLL 66 Query: 72 VQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIISIPKGQW 122 VQLF+I+YG+ + +V SF+ I+ TLN +A+ +EI+R I ++P+GQ Sbjct: 67 VQLFLIYYGIGQLPLVRQSFLWPVMREPFWCAFIAFTLNSAAHTTEILRGGIQAVPRGQV 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A+GL+ T R I+ P TI + +E I +LK++S+ASTIT+ E+ A+++V Sbjct: 127 EAAKALGLSSFHTARLIVFPLTIRIALPAYVNEVIGLLKASSLASTITLLEMTGLARQLV 186 Query: 183 STTYQPLIIYCELAFVYLILT 203 S T+ P ++ YL+ T Sbjct: 187 SQTFAPYEVFVVAGAFYLMFT 207 >gi|322392133|ref|ZP_08065595.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus peroris ATCC 700780] gi|321145033|gb|EFX40432.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus peroris ATCC 700780] Length = 229 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 116/212 (54%), Gaps = 11/212 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF----YVWI 64 +++ P LL A +TL + + V S+ +G IA F I ++H+ Y+W+ Sbjct: 20 LLEILPSLLNGA-AMTLQVFALVLVFSIPLGILIA-----FCLQIHWKLLHYMIDVYIWV 73 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLL+QL I+Y LP++GI FD A II+ TLN++AY +EI R I +IP+GQ++A Sbjct: 74 MRGTPLLLQLIFIYYVLPNVGIRFDRVPAAIIAFTLNYAAYFAEIFRGGIATIPQGQYEA 133 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + + T T+R+IILPQ + +E +S++K TS+ + + ++ A R + Sbjct: 134 AKVLKFTPLATVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGVSDLI-LASRTAAN 192 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 LI +YL++ I+ K+E Sbjct: 193 RDASLIPMFLAGAIYLLMIGIVTIVAKKLEKK 224 >gi|224500426|ref|ZP_03668775.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes Finland 1988] gi|254827790|ref|ZP_05232477.1| glutamine ABC transporter [Listeria monocytogenes FSL N3-165] gi|258600171|gb|EEW13496.1| glutamine ABC transporter [Listeria monocytogenes FSL N3-165] Length = 480 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 124/217 (57%), Gaps = 3/217 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 + +I S+P LL + + +T+ +A +S +I+ IIG +++ S I+ I YV I Sbjct: 266 FMGIIKSSWPALL-SGLWLTIRLAVVSLIIAFIIGITFGFMKVSNS-KILRGIATVYVDI 323 Query: 65 FRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTPL+VQ F ++G+P + F+A +I+L+LN AY+ EI+R I S+ KGQ + Sbjct: 324 FRGTPLIVQAFFFYFGIPAALDFRMPVFLAGVIALSLNAGAYMVEIVRGGIQSVDKGQME 383 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++GL K+ + ++LPQ I ++F+ LK TS+ S I + E+ Q+ + I++ Sbjct: 384 AARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQSGKIIMA 443 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T++ + + +YLI+ + I ++E + Sbjct: 444 RTFESTWTWLIIGIMYLIVITILTKISDRLERRLRND 480 >gi|260463004|ref|ZP_05811207.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259031125|gb|EEW32398.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 224 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 121/207 (58%), Gaps = 5/207 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++ F + S+P L + +T+ ++ IS V+ ++GF + ++R + +I+ ++ Sbjct: 1 MIWQQFLSLAGSYP-LALRGLGMTVVLSLISLVLGTVLGFGLGILRTG-GNRLIAGVIGA 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +V + RGTP LVQ+F+IF+ LP G+ D+F A II+LT + +I EI+ + I S+P G Sbjct: 59 WVDLIRGTPFLVQIFLIFFILPEFGVELDAFTAGIIALTNLAACFICEIVVAGIRSVPTG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A GL+R Q +R ++LPQ + PL +++ ++K +SV S I + ++ + Sbjct: 119 QVEAALASGLSRWQRLRQVVLPQAMRIVLPPLVGQYVLLIKDSSVVSAIGLTDLTRVGWL 178 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCY 207 +V L+++ + Y I+ CY Sbjct: 179 VVQRVPNGLLVFFLVGVGYFIV---CY 202 >gi|330820138|ref|YP_004349000.1| ABC-type amino acid transport system, permease component [Burkholderia gladioli BSR3] gi|327372133|gb|AEA63488.1| ABC-type amino acid transport system, permease component [Burkholderia gladioli BSR3] Length = 216 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/197 (30%), Positives = 114/197 (57%), Gaps = 5/197 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ +SFV+ + + +R+ S+ + + Y+ IF+GTPLL+Q+FV+F+GLP Sbjct: 20 TVVLSLVSFVLGGALALALLAMRVS-SNVALRGAVKLYIEIFQGTPLLMQIFVVFFGLPL 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 G+ +VA + LT SAY++EI R + ++P+GQW+AS ++ ++ + +RH+ILPQ Sbjct: 79 AGLDVPPWVAATLGLTFFTSAYLAEIWRGCVEAVPRGQWEASASLAMSYLEQLRHVILPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI-- 201 + P + +K T++ S I E+ + I + T++P ++Y +A +Y Sbjct: 139 AARIAVGPTVGFGVQAVKDTALVSIIGFTELTRAGTVISNATFRPFLVYGLVALIYFALC 198 Query: 202 --LTSFCYIIQIKIESS 216 LT + ++Q K ++ Sbjct: 199 YPLTRWARVLQRKWHAA 215 >gi|313609881|gb|EFR85296.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes FSL F2-208] Length = 471 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 124/217 (57%), Gaps = 3/217 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 + +I S+P LL + + +T+ +A +S +I+ IIG +++ S I+ I YV I Sbjct: 257 FMGIIKSSWPALL-SGLWLTIRLAVVSLIIAFIIGITFGFMKVSNS-KILRGIATVYVDI 314 Query: 65 FRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTPL+VQ F ++G+P + F+A +I+L+LN AY+ EI+R I S+ KGQ + Sbjct: 315 FRGTPLIVQAFFFYFGIPAALDFRMPVFLAGVIALSLNAGAYMVEIVRGGIQSVDKGQME 374 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++GL K+ + ++LPQ I ++F+ LK TS+ S I + E+ Q+ + I++ Sbjct: 375 AARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQSGKIIMA 434 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T++ + + +YLI+ + I ++E + Sbjct: 435 RTFESTWTWLIIGIMYLIVITILTKISDRLERRLRND 471 >gi|226360126|ref|YP_002777904.1| amino acid ABC transporter permease protein [Rhodococcus opacus B4] gi|226238611|dbj|BAH48959.1| putative amino acid ABC transporter permease protein [Rhodococcus opacus B4] Length = 327 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 78/238 (32%), Positives = 128/238 (53%), Gaps = 34/238 (14%) Query: 3 YEWFNLIIDSFPQLLY-----AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI 57 Y W D + Q L+ AA T+ + +S I++++G +AV+R+ + ++ Sbjct: 53 YRW-----DVYAQYLFDARISAAAWNTIQLTILSMAIAIVLGVVLAVMRLS-PNPVLKAA 106 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGL-PHI------GIVF-------------DSFVAIIIS 97 Y+WIFRGTP+ VQL +F+GL P I GI F +F+ +I Sbjct: 107 SWGYLWIFRGTPVYVQL--VFWGLFPSIYKQLDLGIPFVHQFVHIDLQGINAAFLFAVIG 164 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 L LN +AY++EI+R+ + S+ +GQ +AS A+G+T QT+R +LPQ + P +E I Sbjct: 165 LGLNEAAYMAEIVRAGVNSVAEGQSEASVALGMTWSQTMRRTVLPQAMRVIIPPTGNELI 224 Query: 158 SILKSTSVASTITIP-EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S+LK+TS+ + + E++ A+ I +QP+ + A YL +TS I Q +E Sbjct: 225 SMLKTTSLVTAVPYSLELYGRARDISGANFQPIPLLMVAATWYLAITSLLMIGQFYLE 282 >gi|332288760|ref|YP_004419612.1| arginine transporter permease subunit ArtM [Gallibacterium anatis UMN179] gi|330431656|gb|AEC16715.1| arginine transporter permease subunit ArtM [Gallibacterium anatis UMN179] Length = 226 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 123/215 (57%), Gaps = 13/215 (6%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLL 71 Q + I +P + + V++L+I FF+A++ F + II I+ Y+ +F GTPLL Sbjct: 3 QEYFVTIAQGIPTSLLLTVVALVIAFFLAILFTFLLALGNPIIKKIIGVYITLFTGTPLL 62 Query: 72 VQLFVIFYG---------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 VQ+F+I+ G P ++ +++ +++L LN +AY +++ ++ +I KGQW Sbjct: 63 VQIFLIYSGPGQFQWIVDGPLWSLLSNAWFCAMLALALNSAAYSTQLFYGAVKAISKGQW 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 ++ A+GL+R QT++ I++P + + ++E I + K TS+ASTITI +I A+++ Sbjct: 123 ESCAALGLSRAQTLK-ILIPYALKRALPSYTNEIILVFKGTSLASTITIMDIMGYARQLY 181 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 T Y L+IY +YL++T K+E V Sbjct: 182 GTEYNALLIYGLAGVIYLVITGVATYFLRKLEQRV 216 >gi|257899437|ref|ZP_05679090.1| amino acid ABC transporter [Enterococcus faecium Com15] gi|257837349|gb|EEV62423.1| amino acid ABC transporter [Enterococcus faecium Com15] Length = 526 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 108/208 (51%), Gaps = 10/208 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISL 56 F I + + +TL IA I V+ +G I V R F I + Sbjct: 286 FTTIWKQYGNMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRSVPESGNALTRFFQKIGNA 345 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 ++ YV IFRGTP++VQ VIFYGL GI + +A + ++LN AY++EI+R I Sbjct: 346 LLSIYVEIFRGTPMMVQAMVIFYGLALAFGISLNRTIAALFIVSLNTGAYMTEIVRGGIF 405 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ +GQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++F Sbjct: 406 AVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADLF 465 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 +Q + + +YL++T Sbjct: 466 FQGNSASGANFQFFQTFTIVGIIYLVMT 493 >gi|297202327|ref|ZP_06919724.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sviceus ATCC 29083] gi|197710153|gb|EDY54187.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sviceus ATCC 29083] Length = 312 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/233 (26%), Positives = 130/233 (55%), Gaps = 14/233 (6%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K +W + F + A TL I+ ++ ++ +++G +AV+R+ + + S + Y Sbjct: 56 KIQWSAVGDKLFDSTVLAGAGRTLLISILAMIVGVVLGVLLAVMRLS-KNPVTSWVAWAY 114 Query: 62 VWIFRGTPLLVQLFVIF-----YGLPHIGIVFDS--------FVAIIISLTLNFSAYISE 108 +W FRGTP+ VQL + F + + ++G ++ F+ ++ L LN +AY++E Sbjct: 115 IWFFRGTPVYVQLLLWFNLALIFPMLNLGPIYKDEMTDVMTPFMCALLGLGLNEAAYMAE 174 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I R+ ++++ +GQ +A++A+G++ +T+R I++PQ + P +EFI++LK++S+ Sbjct: 175 ICRAGLMAVDEGQTEAAHALGMSHGKTLRRIVIPQAMRVIVPPTGNEFINMLKTSSLVYA 234 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 +T E+ + I ST+Y + + + YL++TS + Q +E + + Sbjct: 235 VTYNELLRATSTIGSTSYAVMEMLFVASIWYLVMTSVFSVFQYYLERRFARGS 287 >gi|325526518|gb|EGD04078.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. TJI49] Length = 297 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 112/204 (54%), Gaps = 14/204 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY---- 79 T+ + ++ + +++G AV+R+ S+ ++ I Y+W+FRGTP+++QL + F Sbjct: 81 TIVMTVLAMTLGIVLGVVTAVMRLS-SNPVLGAIAQGYIWLFRGTPVILQLLLWFNLALV 139 Query: 80 ----GLPHIG-----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 G+P I V F+A ++ L +N AY SE++R+ ++S+ GQ++A+ +IG+ Sbjct: 140 FPTLGIPGIAEFRTVDVMTPFLAALLGLGINQGAYTSEVVRAGLLSVDTGQYEAAKSIGM 199 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 R Q +R IILPQ + P+ +E I ++K TS+AS + E+ AQ I + + Sbjct: 200 PRLQALRRIILPQAMRVIVPPIGNELIGMVKLTSLASVVQYAEMLHNAQNIYYANARVIE 259 Query: 191 IYCELAFVYLILTSFCYIIQIKIE 214 + YL + + + Q ++E Sbjct: 260 LLIVAGIWYLAVVTVLSLAQARVE 283 >gi|295107159|emb|CBL04702.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Gordonibacter pamelaeae 7-10-1-b] Length = 480 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 125/217 (57%), Gaps = 7/217 (3%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +I+ S P L +A +V++ + +SF +++ +G ++ +R+ + I Y+ I RG Sbjct: 208 IIVTSVPAL-FAGWLVSIGVVVVSFPLAIPLGLLLSFLRMA-KHRLPRAIGATYINIVRG 265 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPL +QL++ F+GLP +G+ D+F I L +N SAY++EI R+ I SI +GQ++A+ + Sbjct: 266 TPLFLQLYIAFFGLPLMGVQMDNFTMGAIVLVMNSSAYLAEIFRAGIQSISQGQFEAARS 325 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ QT+ +I+PQT+ ++SEFI + K TS+ + + + E+ A+ I + T Sbjct: 326 LGMNGAQTMFFVIIPQTVRRVIPTMTSEFILMYKDTSLLAAVGVTELMMYAKTITAATGN 385 Query: 188 PLIIYCELAFVYLI----LTSFCYIIQIKIESSVTQH 220 + Y A YLI LT ++ ++ + +H Sbjct: 386 -VTPYIVAAGFYLIVTIPLTKLINTMEARMSNGRRKH 421 >gi|253576621|ref|ZP_04853949.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. oral taxon 786 str. D14] gi|251844035|gb|EES72055.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. oral taxon 786 str. D14] Length = 251 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 78/242 (32%), Positives = 132/242 (54%), Gaps = 21/242 (8%) Query: 1 MKYEWF-NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI---------FFS 50 M YEW +I D++P L A VTL I+ I +I IG VIR + Sbjct: 15 MTYEWIIQIITDNWPMFLRGA-GVTLYISLIGTMIGAAIGLLAGVIRTIPVPERGLKHWL 73 Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAY 105 I++ ++ Y+ FRGTP++VQ IFYG ++F+ +F AI I +++N AY Sbjct: 74 LKIVNGLLTIYIECFRGTPMIVQAMAIFYGSS---LLFNYDMDRTFAAIFI-VSINTGAY 129 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 ++EI+R I S+ KGQ++A++AIG+T QT+R+++LPQ I ++FI +K TSV Sbjct: 130 MAEIVRGGIYSVDKGQFEAAHAIGMTHWQTMRNVVLPQVIRHILPATGNQFIINIKDTSV 189 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ-HTYSV 224 + I++ E++ + I ++ + + +YLI+T I +IE + +Y++ Sbjct: 190 LNVISVSELYFMTKSIAGNNFRYFESFFVASVLYLIMTLTVTKILQRIEKRLDGPESYTL 249 Query: 225 DK 226 + Sbjct: 250 QR 251 >gi|46907078|ref|YP_013467.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes serotype 4b str. F2365] gi|224503184|ref|ZP_03671491.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes FSL R2-561] gi|254832188|ref|ZP_05236843.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes 10403S] gi|255520210|ref|ZP_05387447.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes FSL J1-175] gi|284801176|ref|YP_003413041.1| hypothetical protein LM5578_0926 [Listeria monocytogenes 08-5578] gi|284994318|ref|YP_003416086.1| hypothetical protein LM5923_0880 [Listeria monocytogenes 08-5923] gi|46880345|gb|AAT03644.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes serotype 4b str. F2365] gi|284056738|gb|ADB67679.1| hypothetical protein LM5578_0926 [Listeria monocytogenes 08-5578] gi|284059785|gb|ADB70724.1| hypothetical protein LM5923_0880 [Listeria monocytogenes 08-5923] Length = 480 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 124/217 (57%), Gaps = 3/217 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 + +I S+P LL + + +T+ +A +S +I+ IIG +++ S I+ I YV I Sbjct: 266 FMGIIKSSWPALL-SGLWLTIRLAVVSLIIAFIIGITFGFMKVSNS-KILRGIATVYVDI 323 Query: 65 FRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTPL+VQ F ++G+P + F+A +I+L+LN AY+ EI+R I S+ KGQ + Sbjct: 324 FRGTPLIVQAFFFYFGIPAALDFRMPVFLAGVIALSLNAGAYMVEIVRGGIQSVDKGQME 383 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++GL K+ + ++LPQ I ++F+ LK TS+ S I + E+ Q+ + I++ Sbjct: 384 AARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQSGKIIMA 443 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T++ + + +YLI+ + I ++E + Sbjct: 444 RTFESTWTWLIIGIMYLIVITILTKISDRLERRLRND 480 >gi|217965060|ref|YP_002350738.1| glutamine ABC transporter permease/substrate-binding protein [Listeria monocytogenes HCC23] gi|290892961|ref|ZP_06555951.1| glutamine ABC transporter [Listeria monocytogenes FSL J2-071] gi|217334330|gb|ACK40124.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes HCC23] gi|290557537|gb|EFD91061.1| glutamine ABC transporter [Listeria monocytogenes FSL J2-071] gi|307570380|emb|CAR83559.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes L99] Length = 480 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 124/217 (57%), Gaps = 3/217 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 + +I S+P LL + + +T+ +A +S +I+ IIG +++ S I+ I YV I Sbjct: 266 FMGIIKSSWPALL-SGLWLTIRLAVVSLIIAFIIGITFGFMKVSNS-KILRGIATVYVDI 323 Query: 65 FRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTPL+VQ F ++G+P + F+A +I+L+LN AY+ EI+R I S+ KGQ + Sbjct: 324 FRGTPLIVQAFFFYFGIPAALDFRMPVFLAGVIALSLNAGAYMVEIVRGGIQSVDKGQME 383 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++GL K+ + ++LPQ I ++F+ LK TS+ S I + E+ Q+ + I++ Sbjct: 384 AARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQSGKIIMA 443 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T++ + + +YLI+ + I ++E + Sbjct: 444 RTFESTWTWLIIGIMYLIVITILTKISDRLERRLRND 480 >gi|15892094|ref|NP_359808.1| amino acid ABC transporter permease protein [Rickettsia conorii str. Malish 7] gi|34580875|ref|ZP_00142355.1| amino acid ABC transporter permease protein [Rickettsia sibirica 246] gi|229586369|ref|YP_002844870.1| Amino acid ABC transporter permease protein [Rickettsia africae ESF-5] gi|238650695|ref|YP_002916548.1| amino acid ABC transporter permease protein [Rickettsia peacockii str. Rustic] gi|81774423|sp|Q92J96|GLNP_RICCN RecName: Full=Putative glutamine transport system permease protein glnP gi|15619217|gb|AAL02709.1| amino acid ABC transporter permease protein [Rickettsia conorii str. Malish 7] gi|28262260|gb|EAA25764.1| amino acid ABC transporter permease protein [Rickettsia sibirica 246] gi|228021419|gb|ACP53127.1| Amino acid ABC transporter permease protein [Rickettsia africae ESF-5] gi|238624793|gb|ACR47499.1| amino acid ABC transporter permease protein [Rickettsia peacockii str. Rustic] Length = 218 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 122/207 (58%), Gaps = 7/207 (3%) Query: 5 WFNLIIDSFPQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 F +I +P++ + +VTL + I+ + L+IG +A+ ++ + + L +FY Sbjct: 1 MFEYLIKFYPKIFFIVEGTLVTLKYSVIAVIFGLVIGMLLAICKVN-KNRALRLFANFYT 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 IFRGTPLL+QL +I++ P+I GI F F+A I+ +LN AY+SE+IR+ I ++ KGQ Sbjct: 60 SIFRGTPLLIQLSIIYFASPYIIGIKFSVFMAGAIAFSLNSGAYVSEVIRAGINAVDKGQ 119 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++A+ A+ + + + IILPQ + L +E ++++K +++ S + ++ + AQ + Sbjct: 120 FEAAEALAIPKFLITKDIILPQAVKNIFPSLVNELVNLIKESAIISMLGEMDLMRRAQIV 179 Query: 182 VSTTYQ---PLIIYCELAFVYLILTSF 205 TY P++I ++ ++L SF Sbjct: 180 SIETYNYFFPMLIAACCYYILVMLISF 206 >gi|320546644|ref|ZP_08040956.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] gi|320448699|gb|EFW89430.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] Length = 213 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/168 (37%), Positives = 102/168 (60%), Gaps = 4/168 (2%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRGTPLL 71 P LL A VTL + CI V+S+ G +A +++I F + ++ YVWI RGTPLL Sbjct: 8 LPSLLDGA-AVTLQVFCIVIVLSIPFGAILAFLMQIKFKP--LQWLLTLYVWIMRGTPLL 64 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +QL +Y LP +G+V D A I++ TLN++AY +EI R I +IPKGQ++A+ + L Sbjct: 65 LQLIFFYYVLPSVGVVMDRLPAAILAFTLNYAAYFAEIFRGGISAIPKGQYEAAKVLKLN 124 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 + QTI +IILPQ + +E I+++K +S+ + + ++ ++ Sbjct: 125 QLQTIHYIILPQVFKIVLPSVFNEIINLVKDSSLVYVLGVGDLLLASK 172 >gi|315283361|ref|ZP_07871572.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria marthii FSL S4-120] gi|313613009|gb|EFR86940.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria marthii FSL S4-120] Length = 486 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++T+ +A I + ++G +A++++ + + Y+ RGTPLL+Q+F++F+ Sbjct: 286 GTLITIALAAIGVLCGAVLGSLLALMKLAKT-RWLRWPAACYIEFVRGTPLLIQIFIVFF 344 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G IG+ +FV+ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+T+ ++R+I Sbjct: 345 GTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQSASMRYI 404 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L +EF++++K +S+ S I + E+ + +++P I + +Y Sbjct: 405 ILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIY 464 Query: 200 LILT 203 +LT Sbjct: 465 FVLT 468 >gi|197303849|ref|ZP_03168885.1| hypothetical protein RUMLAC_02588 [Ruminococcus lactaris ATCC 29176] gi|197297142|gb|EDY31706.1| hypothetical protein RUMLAC_02588 [Ruminococcus lactaris ATCC 29176] Length = 236 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 116/206 (56%), Gaps = 9/206 (4%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFS-DTIISLIMH---FYVWIFRGTPLLVQLFVIFY 79 TL IA +I ++IG IA +R+ T+ ++ H FYV +FRGTP++VQL V +Y Sbjct: 31 TLMIAICGLIIGIVIGTLIATVRVIPKYKTLPKVLNHICSFYVALFRGTPMVVQLLVFYY 90 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 L P IG+ ++ LN AYISEI+RS I S+ GQ +A A+GL+ ++ Sbjct: 91 VLLPIIGVKITGVQVAMVVFGLNSGAYISEIMRSGIQSVDPGQMEAGRAVGLSFGTSMTK 150 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 I++PQ + L +EFIS++K TSV S + +++ I S +Y+ ++ Y +A + Sbjct: 151 IVIPQAVKNILPTLGNEFISLVKETSVVSFVGAADLYVAFNYIGSNSYEFMVPYLVMALI 210 Query: 199 Y----LILTSFCYIIQIKIESSVTQH 220 Y LI+T I++ ++ S ++ Sbjct: 211 YIALVLIITLLVKILERSLKKSDRRN 236 >gi|111017996|ref|YP_700968.1| ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] gi|110817526|gb|ABG92810.1| ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] Length = 330 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/217 (34%), Positives = 121/217 (55%), Gaps = 24/217 (11%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 AA T+ + +S I++I+G +AV+R+ + ++ Y+WIFRGTP+ VQL +F Sbjct: 72 AAAWNTIQLTILSMAIAIILGVVLAVMRLS-PNPVLKAASWGYLWIFRGTPVYVQL--VF 128 Query: 79 YGL-PHI------GIVF-------------DSFVAIIISLTLNFSAYISEIIRSSIISIP 118 +GL P I GI F +F+ +I L LN +AY++EI+R+ + S+ Sbjct: 129 WGLFPSIYKQLDLGIPFVHQFVHIDLQGINAAFLFAVIGLGLNEAAYMAEIVRAGVNSVA 188 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP-EIFQT 177 +GQ +AS A+G+T QT+R +LPQ + P +E IS+LK+TS+ + + E++ Sbjct: 189 EGQTEASVALGMTWSQTMRRTVLPQAMRVIIPPTGNELISMLKTTSLVTAVPYSLELYGR 248 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 A+ I +QP+ + A YL +TS I Q +E Sbjct: 249 ARDISGANFQPIPLLMVAATWYLAITSLLMIGQFYLE 285 >gi|327394993|dbj|BAK12415.1| probable amino-acid ABC transporter permease protein YckJ [Pantoea ananatis AJ13355] Length = 245 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 124/208 (59%), Gaps = 11/208 (5%) Query: 1 MKYEWFNLI--IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL-- 56 M+Y+W L D+F AA +TL + ++F+++L++G A+ + S T L Sbjct: 1 MRYQWLTLWQYADTF----LAATWLTLQVTLLAFMLALVLGLLAALAK---SATFAPLRW 53 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + H YV R TP+L+Q+F++F+GLP +GI +F A +++L +N AY++E+ R+ I S Sbjct: 54 LSHGYVEFIRNTPVLLQIFIVFFGLPSLGITMSAFTAGVLALGINVGAYLAEVFRAGIQS 113 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +PKGQ +A++ +G++R+Q ++++PQ + + I +L TS+ S I +PE+ Sbjct: 114 VPKGQLEAAWILGISRRQRFLNVVMPQAARAVWPAIINNLIQLLLGTSLLSAIALPELTG 173 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTS 204 TA I + T + + +A VYL L++ Sbjct: 174 TATVINARTLLYIQTFSVVALVYLFLSN 201 >gi|120556217|ref|YP_960568.1| polar amino acid ABC transporter, inner membrane subunit [Marinobacter aquaeolei VT8] gi|120326066|gb|ABM20381.1| amino acid ABC transporter membrane protein 2, PAAT family [Marinobacter aquaeolei VT8] Length = 240 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/217 (30%), Positives = 121/217 (55%), Gaps = 10/217 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + +V T+ + +S VI L++ +A++R + +S + Y ++FRGTPLL+QL++I Sbjct: 24 WDGLVTTVHLVFLSLVIGLVVAVPLAILRTV-KNPFVSGPIWLYTYLFRGTPLLIQLYII 82 Query: 78 FYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +YG+ I + D+F +++ TLN +AY +EIIR +IIS P G+ +A+ A Sbjct: 83 YYGVAQIPGIQDTFWWEIFKEPLYPALLAFTLNTAAYTTEIIRGAIISTPNGEIEAAKAY 142 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+ +R IILP + S+E I +L ++++AS +TI ++ A+ I S Y P Sbjct: 143 GMNWFLRMRRIILPSAARRAVQAYSNEVIFMLHASAIASVVTIVDLTGAARNIYSRFYAP 202 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + +A Y+ LT + K+E+ + +H ++ Sbjct: 203 FEAFIFVALCYMALTFILVFVFRKLENHLLRHQRPLN 239 >gi|17548126|ref|NP_521528.1| amino-acid transmembrane ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17430433|emb|CAD16906.1| probable amino-acid transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 223 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/184 (35%), Positives = 109/184 (59%), Gaps = 2/184 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL A VVT+ + +SF++S +IG +A++R+ +S V I RG P++V Sbjct: 14 LPILLQGA-VVTVEVTVLSFLLSSVIGLALALMRLS-PIKAVSAAGATIVNIIRGLPIIV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I++ LP IGI +F A +I L + +SAY +E R+ I ++ GQ +A+ A+G+ Sbjct: 72 QLFYIYFVLPDIGIQLTAFQAGVIGLGIAYSAYQAENFRAGIEAVDPGQREAAQAMGMRG 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +R +ILPQ + P + + +LK +S+ STIT+ E+ + Q I S+T+Q + +Y Sbjct: 132 ALIMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAGQLIASSTFQNMTVY 191 Query: 193 CELA 196 +A Sbjct: 192 TLVA 195 >gi|332523001|ref|ZP_08399253.1| putative arginine ABC transporter, permease protein ArtQ [Streptococcus porcinus str. Jelinkova 176] gi|332314265|gb|EGJ27250.1| putative arginine ABC transporter, permease protein ArtQ [Streptococcus porcinus str. Jelinkova 176] Length = 213 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 119/211 (56%), Gaps = 9/211 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRG 67 I+ P LL A VTL + I +S+ +G +A ++++ F + + YVWI RG Sbjct: 4 ILQVLPSLLDGA-KVTLQVFFIVISLSIPLGALLAFLMKVPFKP--LQWFLTLYVWIMRG 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL +Y LP++G+ FD A I++ T+N++AY +EI R I +IPKGQ++A+ Sbjct: 61 TPLLLQLIFFYYVLPNVGLTFDRMPAAILAFTMNYAAYFAEIFRGGIEAIPKGQYEAAKV 120 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TT 185 + L++ QTIR+IILPQ + +E I+++K +S+ + + ++ ++ + T Sbjct: 121 LRLSQLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKTAANRDAT 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 P+ I +YL+L I+ IE Sbjct: 181 LAPMFI---AGMIYLLLIGLVTILSRHIEKK 208 >gi|330809176|ref|YP_004353638.1| amino acid ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377284|gb|AEA68634.1| putative amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 258 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/182 (33%), Positives = 103/182 (56%), Gaps = 12/182 (6%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI------------VFDSFVAIIIS 97 + ++ L + FYVW+ RGTPLLVQ+ ++ L GI + + A II+ Sbjct: 51 KNPLLHLPVRFYVWLMRGTPLLVQIVFLYTALAAGGIFRFEDIGLFGLVIPGNIQAAIIA 110 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 L LN AY++EIIR+ I ++ KGQ++A ++G+T + +R I+LPQ PL +EF Sbjct: 111 LGLNEGAYMAEIIRAGIGAVDKGQYEAGRSLGMTFAKLMRRIVLPQAFRVIVPPLGNEFN 170 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +LK+T++ S I + E+ + Q + S T++ +Y +A +L+LT+ Q +E+ Sbjct: 171 VMLKNTTLVSVIGVQELLLSTQMVTSATFRVFELYLVVAIYFLLLTTLWGFFQRWLEARF 230 Query: 218 TQ 219 Q Sbjct: 231 GQ 232 >gi|326803801|ref|YP_004321619.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] gi|326651293|gb|AEA01476.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] Length = 548 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 123/223 (55%), Gaps = 16/223 (7%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISL---IMHF----YVWI 64 QLL A T+ IA IS ++ +IG IA+ R I S I+S+ ++ F Y+ + Sbjct: 315 QLLKGA-ATTMYIALISTLVGFLIGLLIAIYRSMPIAESSGIVSILYKVVEFLITAYIEV 373 Query: 65 FRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTP++VQ +IFYG +GI S A ++ +++N AY++E+IR II + GQ + Sbjct: 374 FRGTPMMVQAMMIFYGSKLFLGIDMSSMFAALLIVSVNTGAYLAEVIRGGIIGVDDGQSE 433 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ AIG+ QT+ +++LPQ I + L +EF+ +K TSV + I + E+F ++ Sbjct: 434 AAKAIGMNHFQTMTYVVLPQAIRSILPALGNEFVINIKDTSVLNVIAVTELFFVSKSAAG 493 Query: 184 TTYQPLIIYCELAFVYLIL----TSFCYIIQIKIESSVTQHTY 222 TTY + A +Y +L T +++ K+ S T Y Sbjct: 494 TTYLTFQTFFITAIIYFVLTFTTTRLLRLVERKMSGSDTYTVY 536 >gi|227550833|ref|ZP_03980882.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] gi|293379248|ref|ZP_06625394.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] gi|293573051|ref|ZP_06683992.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E980] gi|227180028|gb|EEI61000.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] gi|291606870|gb|EFF36251.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E980] gi|292642044|gb|EFF60208.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] Length = 530 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 108/208 (51%), Gaps = 10/208 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISL 56 F I + + +TL IA I V+ +G I V R F I + Sbjct: 290 FTTIWKQYGNMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRSVPESGNALTRFFQKIGNA 349 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 ++ YV IFRGTP++VQ VIFYGL GI + +A + ++LN AY++EI+R I Sbjct: 350 LLSIYVEIFRGTPMMVQAMVIFYGLALAFGISLNRTIAALFIVSLNTGAYMTEIVRGGIF 409 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ +GQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++F Sbjct: 410 AVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADLF 469 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 +Q + + +YL++T Sbjct: 470 FQGNSASGANFQFFQTFTIVGIIYLVMT 497 >gi|256750907|ref|ZP_05491791.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter ethanolicus CCSD1] gi|256750242|gb|EEU63262.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter ethanolicus CCSD1] Length = 220 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 113/187 (60%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++ +++ + L + +++TL + ++ I +I+G +A+I++ S IS I Sbjct: 1 MSVDFLSMV--KYSHLFVSGLLMTLKLTFLAVTIGVILGLIVALIKMS-SIKPISFIGAS 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV I RGTPLLVQL +I+ GL GI +F A + +L +N +AY++EIIR+ I ++ G Sbjct: 58 YVEIIRGTPLLVQLLLIYNGLMQFGIDIPAFTAGVSALAINSAAYVAEIIRAGIQAVDPG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++G+T +R++I+PQ I L +EFI +LK +++ S I ++ + A Sbjct: 118 QNEAARSLGMTHTMAMRYVIIPQAIKNILPALGNEFIVMLKESAIISVIGFADLTRQADI 177 Query: 181 IVSTTYQ 187 I S TY+ Sbjct: 178 IQSITYK 184 >gi|254701711|ref|ZP_05163539.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis bv. 5 str. 513] gi|261752262|ref|ZP_05995971.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513] gi|261742015|gb|EEY29941.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513] Length = 277 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/222 (30%), Positives = 125/222 (56%), Gaps = 12/222 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I+++ ++ +++TL + IS VI ++ I R+ S + SL YV+ FRGT Sbjct: 55 LIETYGPRYWSGLLITLKLVAISIVIGALLSLPITAARMSNSRWLRSLAFG-YVYFFRGT 113 Query: 69 PLLVQLFVIFYG-------LPHIG--IVF-DSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLL Q F+I+YG L +G ++F D++ I++ +LN +AY +EI+R +I S+ Sbjct: 114 PLLAQTFLIYYGFGTFRPFLESVGLWVLFRDAWNCAILAFSLNTAAYQAEILRGAIESVA 173 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQW+ + A+G++++ T +ILPQ + + P +E I ++K +++ + IT+ ++ Sbjct: 174 VGQWEGAAALGISKRVTFWKVILPQALIVALRPYGNEIILMIKGSAIVAIITVLDLMGET 233 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +R S T+ Y A +YL++ I +E +T+H Sbjct: 234 RRAYSRTFD-FQTYLWAAVIYLLMVEILRHIWDALERRLTRH 274 >gi|260588159|ref|ZP_05854072.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Blautia hansenii DSM 20583] gi|331082275|ref|ZP_08331402.1| hypothetical protein HMPREF0992_00326 [Lachnospiraceae bacterium 6_1_63FAA] gi|260541686|gb|EEX22255.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Blautia hansenii DSM 20583] gi|330403069|gb|EGG82634.1| hypothetical protein HMPREF0992_00326 [Lachnospiraceae bacterium 6_1_63FAA] Length = 236 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/184 (35%), Positives = 107/184 (58%), Gaps = 5/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFS----DTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 TL IA + ++ ++IG IA +R+ I++ I FYV +FRGTP++VQL V +Y Sbjct: 31 TLMIAIVGLIVGILIGTLIATVRVLPKYKRLPRILNGICSFYVALFRGTPMVVQLLVFYY 90 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 L P +GI V + LN AYISEI+RS I S+ GQ +A A+GL+ ++ Sbjct: 91 VLLPIMGIRTSGEVVAMAVFGLNSGAYISEIMRSGIQSVDAGQLEAGRAVGLSFSVSMVK 150 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 I++PQ + L +EFIS++K TS+ S + +++ I S +Y+ ++ Y +A + Sbjct: 151 IVIPQAVKNILPTLGNEFISLIKETSIVSFVGAADLYVAFSYIGSNSYEFMVPYLVMALI 210 Query: 199 YLIL 202 Y++L Sbjct: 211 YIVL 214 >gi|222153141|ref|YP_002562318.1| amino acid ABC transporter permease [Streptococcus uberis 0140J] gi|222113954|emb|CAR42213.1| putative amino acid ABC transporter permease protein [Streptococcus uberis 0140J] Length = 213 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 118/211 (55%), Gaps = 9/211 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIG-FFIAVIRIFFSDTIISLIMHFYVWIFRG 67 I+ P LL A +TL + I ++S+ +G F ++++ F + + YVWI RG Sbjct: 4 ILQVLPSLLDGA-KITLQVFFIVIILSIPLGAVFAFLMKVNFKP--LQWFLTLYVWIMRG 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL +Y LP +G+ FD A I++ T+N++AY +EI R I +IPKGQ++A+ Sbjct: 61 TPLLLQLIFFYYVLPSVGVTFDRMPAAILAFTMNYAAYFAEIFRGGIEAIPKGQYEAAKV 120 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TT 185 + LT QTI+HIILPQ + +E I+++K +S+ + + ++ ++ + T Sbjct: 121 LKLTPFQTIQHIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKTAANRDAT 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 P+ I +YL+L II ++E Sbjct: 181 LAPMFI---AGLIYLLLIGIVTIISKQVEKK 208 >gi|157693148|ref|YP_001487610.1| glutamine ABC transporter membrane protein [Bacillus pumilus SAFR-032] gi|157681906|gb|ABV63050.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus SAFR-032] Length = 217 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 113/200 (56%), Gaps = 9/200 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E FNL ++ F T+ + I+ + S +IG IA++RI ++ + YV Sbjct: 9 ENFNLYVEGFKY--------TIGASVIALIGSFLIGTLIAIMRIA-PLRPLNWLGTAYVE 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 R PLL+ FV F+GLP +GIV D F A I+L + SA+I+E +R+ I ++P GQ + Sbjct: 60 FIRNIPLLLITFVFFFGLPVLGIVADGFTAGTIALAIYTSAFIAEAVRAGIQAVPLGQME 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A GL+ T+R+IILPQ I PL ++FI+++K++S+ I ++ I S Sbjct: 120 AARASGLSYGGTMRYIILPQAIKIVIPPLGNQFINLVKNSSILGVIAGFDLMYQGDLIAS 179 Query: 184 TTYQPLIIYCELAFVYLILT 203 T+ +Y +A YLILT Sbjct: 180 RTFVTFDVYIFVAMFYLILT 199 >gi|167038159|ref|YP_001665737.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116568|ref|YP_004186727.1| polar amino acid ABC transporter inner membrane subunit [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856993|gb|ABY95401.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929659|gb|ADV80344.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 220 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/176 (35%), Positives = 107/176 (60%), Gaps = 1/176 (0%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + L + +++TL + ++ I +I+G +A+I++ S IS I YV I RGTPLL Sbjct: 10 KYSHLFVSGLLMTLKLTFLAVTIGVILGLIVALIKMS-SIKPISFIGASYVEIIRGTPLL 68 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 VQL +I+ GL GI +F A + +L +N +AY++EIIR+ I ++ GQ +A+ ++G+T Sbjct: 69 VQLLLIYNGLMQFGIDIPAFTAGVSALAINSAAYVAEIIRAGIQAVDPGQNEAARSLGMT 128 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +R++I+PQ I L +EFI +LK +++ S I ++ + A I S TY+ Sbjct: 129 HAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIISVIGFADLTRQADIIQSITYK 184 >gi|27381501|ref|NP_773030.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27354669|dbj|BAC51655.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 222 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 112/198 (56%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+++ + P LL+ V TL +A ++++IG R + + +L++ F V I Sbjct: 7 FSVVWHAMPALLWGC-VGTLGLALAGMTLAMMIGVAGVAARDAKAAWLRALVISF-VEIV 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP LVQ+F +F+ LP IG+ + II+L +N AY EIIR + SI KGQ +A Sbjct: 65 RNTPFLVQIFFLFFALPLIGLKLNPTATAIIALGVNGGAYAIEIIRGGVQSIHKGQIEAG 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 YA+GL + Q R I+L + S L+ +FI + ++S+ S ++ E+ AQRI S T Sbjct: 125 YALGLHKGQVFRFIVLKPALRASYPSLTGQFIMLTLTSSICSAVSAYELTSVAQRIESDT 184 Query: 186 YQPLIIYCELAFVYLILT 203 ++ +Y + F+YL ++ Sbjct: 185 FRSFEVYFSVTFLYLAIS 202 >gi|296449544|ref|ZP_06891321.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP08] gi|296878133|ref|ZP_06902148.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP07] gi|296261608|gb|EFH08426.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP08] gi|296430886|gb|EFH16718.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP07] Length = 230 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 58/156 (37%), Positives = 98/156 (62%), Gaps = 10/156 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF-------DSFVAIIISLTLNFSAY 105 ++ I Y+ + RGTPLLVQ++++++GLP +GI F F+A +L++N AY Sbjct: 55 VLRAISSIYIEVLRGTPLLVQIYIVWFGLPQLGIRFPMLFGIPSEFIASAFALSVNSGAY 114 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 ++EI+RS I S+ GQ +AS ++GL T+R+II+PQ I L++EFI+++K +S+ Sbjct: 115 VAEILRSGIQSVDNGQMEASRSLGLNYWSTMRYIIIPQAIKNILPSLANEFITLVKESSI 174 Query: 166 ASTITIPEIFQTAQRIVSTTY---QPLIIYCELAFV 198 S I + EI +TA + + + +PLI+ + FV Sbjct: 175 ISVIGVVEIMRTADIVKNAAFRALEPLIVAAAIYFV 210 >gi|261822131|ref|YP_003260237.1| glutamine ABC transporter permease [Pectobacterium wasabiae WPP163] gi|261606144|gb|ACX88630.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 219 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/221 (31%), Positives = 125/221 (56%), Gaps = 9/221 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS--DTIISLIM 58 M+++W + I S P L+ A +TL I+ + + L+IG R + + ISL+ Sbjct: 1 MQFDW-SAIWPSLPLLMEGA-KMTLLISVLGLIGGLVIGVVAGFARAYGGWFSSRISLV- 57 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ I RGTP++VQ+ I++ LP I + D F A ++++ +N AYI+EI R S++S Sbjct: 58 --FIEIIRGTPIVVQVMFIYFALPMIFTSVRIDPFAAAVVTIMINSGAYIAEITRGSVLS 115 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I G +A A+GL+R T+RH+I P + PL +++I +K TS+ I + E+ + Sbjct: 116 IHNGFREAGLALGLSRSATLRHVIAPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTR 175 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + Q I++ ++ L I+ +A +YL +T I ++E + Sbjct: 176 SGQEIIAGNFRALEIWTAVAIIYLCITLVLSFILRRLERRL 216 >gi|330965545|gb|EGH65805.1| amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 215 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 110/184 (59%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ ++F+ +IG + V+R + + Y+ +F+GTPLL+QLF++F+G+ Sbjct: 19 TLALSLVAFIGGGLIGLLVMVMRTS-EKSGPRVAAKLYIELFQGTPLLMQLFLVFFGVAL 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ + A ++LTL SAY++EI R + SI KGQW+AS ++ +T + +R++ILPQ Sbjct: 78 MGMDISPWAAAALALTLFTSAYLAEIWRGCVESISKGQWEASASLAMTPLEQMRYVILPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T+V S I E+ +T + + T++P ++Y +A Y IL Sbjct: 138 ALRIAIAPTVGFSVQVVKGTAVTSIIGFTELTKTGSMLANATFEPFMVYGFVALGYFIL- 196 Query: 204 SFCY 207 CY Sbjct: 197 --CY 198 >gi|257887913|ref|ZP_05667566.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257893286|ref|ZP_05672939.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] gi|257896470|ref|ZP_05676123.1| amino acid ABC transporter [Enterococcus faecium Com12] gi|257823967|gb|EEV50899.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257829665|gb|EEV56272.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] gi|257833035|gb|EEV59456.1| amino acid ABC transporter [Enterococcus faecium Com12] Length = 526 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 108/208 (51%), Gaps = 10/208 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISL 56 F I + + +TL IA I V+ +G I V R F I + Sbjct: 286 FTTIWKQYGNMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRSVPESGNALTRFFQKIGNA 345 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 ++ YV IFRGTP++VQ VIFYGL GI + +A + ++LN AY++EI+R I Sbjct: 346 LLSIYVEIFRGTPMMVQAMVIFYGLALAFGISLNRTIAALFIVSLNTGAYMTEIVRGGIF 405 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ +GQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++F Sbjct: 406 AVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADLF 465 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 +Q + + +YL++T Sbjct: 466 FQGNSASGANFQFFQTFTIVGIIYLVMT 493 >gi|116618335|ref|YP_818706.1| ABC-type amino acid transport system, pemease component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097182|gb|ABJ62333.1| amino acid ABC transporter membrane protein, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 219 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 117/199 (58%), Gaps = 3/199 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +I+D P ++ ++ TL + V I G IA+ R+ + +IS I Y+ +F Sbjct: 5 YEMILDYAPFFMHG-LLYTLLFSLCGVVFGTIFGLIIALGRMS-KNPVISGIFKTYIGLF 62 Query: 66 RGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL VQ+ + +G+ P I + ++A +SL+LN +AYI+E RS I SI +GQ +A Sbjct: 63 RGTPLFVQILITNFGVVPAIFGHSNPYIAGALSLSLNAAAYIAETFRSGIQSISEGQREA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + +GL++ T+R II+PQ I L +EFIS++K +S+ S I+ PEI AQ + + Sbjct: 123 ARTLGLSQFDTMRFIIVPQAIKIVIPALGNEFISLIKDSSLVSAISAPEITYWAQAMNAQ 182 Query: 185 TYQPLIIYCELAFVYLILT 203 Y Y +A +YLILT Sbjct: 183 YYVVWTPYLTVAVLYLILT 201 >gi|164688273|ref|ZP_02212301.1| hypothetical protein CLOBAR_01918 [Clostridium bartlettii DSM 16795] gi|164602686|gb|EDQ96151.1| hypothetical protein CLOBAR_01918 [Clostridium bartlettii DSM 16795] Length = 210 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 119/201 (59%), Gaps = 13/201 (6%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 +VTL I ++ + S I+G F+A R+ II + + ++ I RGTPL++QL + FY Sbjct: 12 IVTLEIFFLTIIFSSILGMFVAFGRMS-KYAIIRIPIQVFLLIMRGTPLILQL-MFFYFA 69 Query: 82 PH--IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 P+ F A I++ TLN+SAYI+EI RS I SIP GQ++A+ +G + +T I Sbjct: 70 PYYIFAATLPRFWAAILAFTLNYSAYIAEIYRSGIESIPVGQYEAATVLGFGKAETFFKI 129 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAF 197 ILPQ + P+S+E ++++K T++A I + EIF+ A +S+ + PLI+ Sbjct: 130 ILPQVVKRIIPPMSNELMTLVKDTALAQVIGVAEIFKLAGATMSSQFSTVPLIV---AGV 186 Query: 198 VYLILTS----FCYIIQIKIE 214 YLI+ + FC+ ++ K++ Sbjct: 187 FYLIMNAVVERFCFYLEKKLD 207 >gi|319401122|gb|EFV89341.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Staphylococcus epidermidis FRI909] Length = 485 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/187 (33%), Positives = 111/187 (59%), Gaps = 6/187 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVI 77 I T+ I+ + V+ I+G FIA++++ I L I Y+ RGTP+LVQ+F++ Sbjct: 284 GIKNTILISLVGVVLGSILGSFIALLKL---SKIRPLQWIAGIYIEFLRGTPMLVQVFIV 340 Query: 78 FYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 F+G +G+ + + I+L +N SAYI+EI R+ I ++ KGQ +A+ ++G+ +QT+ Sbjct: 341 FFGTTAALGLDISALICGTIALVINSSAYIAEIFRAGINAVDKGQTEAARSLGMNYRQTM 400 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 + +++PQ I L +EF++++K +S+ STI + EI AQ + ++ P A Sbjct: 401 QSVVMPQAIKKILPALGNEFVTLIKESSIVSTIGVSEIMFNAQVVQGISFDPFTPLLVAA 460 Query: 197 FVYLILT 203 +Y +LT Sbjct: 461 LLYFLLT 467 >gi|289435591|ref|YP_003465463.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171835|emb|CBH28381.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 486 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 112/184 (60%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++T+ +A I + + G +A++++ + + Y+ RGTPLL+Q+F++F+ Sbjct: 286 GTLITIALAAIGVLCGAVFGSLLALMKLAKT-RWLRWPASCYIEFVRGTPLLIQIFIVFF 344 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G IG+ +FV+ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+T+ ++R+I Sbjct: 345 GTQIIGLDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQSASMRYI 404 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + L +EF++++K +S+ S I + E+ + +++P I + +Y Sbjct: 405 ILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLVITSLIY 464 Query: 200 LILT 203 +LT Sbjct: 465 FVLT 468 >gi|319651742|ref|ZP_08005868.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2] gi|317396561|gb|EFV77273.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2] Length = 215 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 111/193 (57%), Gaps = 4/193 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 +D++P L +++T + ++ I++ IG F A ++I ++ I Y+++ RGTP Sbjct: 8 MDTYPVFL-KGMLLTFQLTIVAVFIAIFIGLFFAFLKIS-RIKVLEWIADIYIFLVRGTP 65 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 L+VQ+F+ ++GL + I F ++++ L + AYI+EI R SI SI KGQ +A ++G Sbjct: 66 LVVQIFIFYFGLTALDI--SQFWSVVLGLAFHNGAYIAEIFRGSIQSIDKGQMEAGRSLG 123 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 +T +R IILPQ + PL ++FI LK +S+AS I + E+F A S Y + Sbjct: 124 MTAGLAMRRIILPQAFRRAMPPLGNQFIIALKDSSLASFIGMYELFNVATTYGSNEYDYM 183 Query: 190 IIYCELAFVYLIL 202 +A YL+L Sbjct: 184 SYLLIVAVYYLVL 196 >gi|319782302|ref|YP_004141778.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168190|gb|ADV11728.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 244 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 73/231 (31%), Positives = 123/231 (53%), Gaps = 12/231 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +LI + P LL + VT + +S +I +G +A++R+ S+ +S +Y +F Sbjct: 2 MDLIQLAVPVLL-KGLWVTAALTFVSVLIGFNLGLGLALMRLS-SNRFLSGFAKYYSNVF 59 Query: 66 RGTPLLVQLFVIFYGLPHIG----------IVFDSFVAIIISLTLNFSAYISEIIRSSII 115 RGTPLLVQ+F+ +YGL + ++ D +++L LN +AY SEI+R ++ Sbjct: 60 RGTPLLVQIFLFYYGLGQLSSIKDNAALWWLISDGARCAVLALALNTAAYTSEILRGGLM 119 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+P G +A+ A G++R R I P I + +E I ++K TS+ASTIT+ EI Sbjct: 120 SVPVGLVEAAQACGMSRMLRFRRIEFPLAIRQALPAYGNELILVVKGTSLASTITVLEIT 179 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 A+R++S T+ I+ +YL++ I IE + +H S + Sbjct: 180 GYAKRLMSQTFAIFEIFAIAGVLYLVINLLLIAIIRAIERFLMRHEASSGR 230 >gi|91784299|ref|YP_559505.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia xenovorans LB400] gi|91688253|gb|ABE31453.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] Length = 218 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/192 (33%), Positives = 112/192 (58%), Gaps = 2/192 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 +F I+ P LL A VVT+ I SFV+S +G +A++R+ + ++S ++ + Sbjct: 2 FFQNAIEFLPILLKGA-VVTIEITFCSFVLSTALGLVLALMRVS-GNRVVSNAAATFINV 59 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RG P++VQLF I++ LP +G+ +F A I L + +S Y +E R+ I +I GQ +A Sbjct: 60 IRGLPIIVQLFYIYFVLPDLGVQLSAFQAGSIGLGVAYSVYQAENFRAGIQAIDHGQIEA 119 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + +IG+ +R ++LPQ S + + +LK +S+ASTIT+ E+ + Q I S+ Sbjct: 120 AQSIGMRGAMIMRRVVLPQAFRISLPAYGNTLVMMLKDSSLASTITVAEMTRAGQLIASS 179 Query: 185 TYQPLIIYCELA 196 T+Q + ++ +A Sbjct: 180 TFQNMTVFTLVA 191 >gi|116670306|ref|YP_831239.1| polar amino acid ABC transporter inner membrane subunit [Arthrobacter sp. FB24] gi|116610415|gb|ABK03139.1| amino acid ABC transporter membrane protein 2, PAAT family [Arthrobacter sp. FB24] Length = 218 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 105/181 (58%), Gaps = 2/181 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N I P LL + T+ I + +++ +G AV+R + ++S ++ F V R Sbjct: 6 NFAISVLPVLL-QGLWTTVHITVMGTLLAAGLGLVFAVLR-RLAIPVVSPVVSFLVVFVR 63 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ +V F+ LP G+ FD+ I+ + +N+SAY++E+ RS I +P GQW+A+ Sbjct: 64 GTPLLVQAYVAFFVLPAYGVSFDALTTGIVVIGINYSAYMAEVYRSGIQGVPTGQWEAAT 123 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+ L +T IILPQ I T L + I + K ++V S IT+ E+ TAQ I S+++ Sbjct: 124 ALSLPGSRTWGRIILPQAIRTVVPMLGNYLIQMFKDSAVLSAITVVELMATAQAIGSSSF 183 Query: 187 Q 187 + Sbjct: 184 R 184 >gi|296158385|ref|ZP_06841216.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295891329|gb|EFG71116.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 218 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 113/193 (58%), Gaps = 4/193 (2%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVW 63 +F I+ P LL A VVT+ I SFV+S ++G +A++R+ SD +S ++ Sbjct: 2 FFQNAIEFLPILLKGA-VVTIEITFCSFVLSTVLGLVLALMRV--SDNRAVSNAAATFIN 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RG P++VQLF I++ LP +G+ +F A I L + +S Y +E R+ I +I GQ + Sbjct: 59 VIRGLPIIVQLFYIYFVLPDLGVQLSAFQAGFIGLGVAYSVYQAENFRAGIQAIDPGQIE 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+ +R ++LPQ S + + +LK +S+ASTIT+ E+ + Q I S Sbjct: 119 AAQSIGMRGAMIMRRVVLPQAFRISLPAYGNTLVMMLKDSSLASTITVAEMTRAGQLIAS 178 Query: 184 TTYQPLIIYCELA 196 +T+Q + ++ +A Sbjct: 179 STFQNMTVFTLVA 191 >gi|15618116|ref|NP_224401.1| amino acid ABC transporter ATPase [Chlamydophila pneumoniae CWL029] gi|16752848|ref|NP_445118.1| amino acid ABC transporter, permease protein [Chlamydophila pneumoniae AR39] gi|33241530|ref|NP_876471.1| ABC amino acid transporter permease [Chlamydophila pneumoniae TW-183] gi|4376462|gb|AAD18345.1| ABC Amino Acid Transporter Permease [Chlamydophila pneumoniae CWL029] gi|7189487|gb|AAF38393.1| amino acid ABC transporter, permease protein [Chlamydophila pneumoniae AR39] gi|33236038|gb|AAP98128.1| ABC amino acid transporter permease [Chlamydophila pneumoniae TW-183] Length = 217 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 110/192 (57%), Gaps = 2/192 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 +LL TL ++ I + I+G I V ++F + L+ + YV + RGTPL +Q Sbjct: 9 RLLLRGCGYTLCVSGIGILCGSILGLLIGTVTSLYFPSKLTKLLANSYVTVIRGTPLFIQ 68 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 + +I++GLP + I VA II+L++N +AY++E IR I S+ GQW+++ +G + Sbjct: 69 ILIIYFGLPEVLPIEPTPLVAGIIALSMNSAAYLAENIRGGINSLSIGQWESAMVLGYKK 128 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 Q +II PQ L++EF+S++K +S+ + +PE+ + + IVS P+ +Y Sbjct: 129 YQIFVYIIYPQVFKNILPSLTNEFVSLIKESSILMVVGVPELTKVTKDIVSRELNPMEMY 188 Query: 193 CELAFVYLILTS 204 A +Y ++T+ Sbjct: 189 LICAGLYFLMTT 200 >gi|313632218|gb|EFR99284.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria seeligeri FSL N1-067] gi|313636716|gb|EFS02380.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria seeligeri FSL S4-171] Length = 226 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/193 (29%), Positives = 113/193 (58%), Gaps = 1/193 (0%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 + + ++T+ +A I + + G +A++++ + Y+ RGTPL Sbjct: 17 EKYGNYFIKGTLITIALAAIGVLCGAVFGSLLALMKLA-KTRWLRWPASCYIEFVRGTPL 75 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L+Q+F++F+G IG+ +FV+ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+ Sbjct: 76 LIQIFIVFFGTQIIGLDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGM 135 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T+ ++R+IILPQ + L +EF++++K +S+ S I + E+ + +++P I Sbjct: 136 TQSASMRYIILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFI 195 Query: 191 IYCELAFVYLILT 203 + +Y +LT Sbjct: 196 PLVITSLIYFVLT 208 >gi|325523104|gb|EGD01507.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. TJI49] Length = 257 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 114/198 (57%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++I FP LL A + T+ ++ IS ++++G +A+ R+ I+ + YV I+ Sbjct: 6 LHMIPRYFPFLLKGAWI-TIELSLISMTGAILLGLAVAIGRLS-PRRWIAWPLQCYVEIW 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R PL+VQL VI++ LP IG+ F A ++ L+LN AY+SE+ R++I SI GQ +A Sbjct: 64 RDVPLVVQLLVIYFTLPQIGLTLPGFWAGVLGLSLNLGAYLSEVFRAAIQSIDHGQREAG 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 IG++ R +ILPQ + + + FIS++K +S+ S I + E+ + I++ T Sbjct: 124 MTIGMSNAMIYRRVILPQAMKVALPTVGGYFISLMKDSSLVSFIAVNELLRHGTIIIAET 183 Query: 186 YQPLIIYCELAFVYLILT 203 + + +Y +A +Y ++ Sbjct: 184 FMSMQVYLMVAIIYFAMS 201 >gi|307312879|ref|ZP_07592508.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|306899393|gb|EFN30026.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 228 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 121/204 (59%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F +++ PQ++ + + +T+ ++ + + +G F AV+ S I L++ Sbjct: 1 MDYTFQFGPLLNYLPQIV-SGLWLTIGLSFVGIFGGIALGIFCAVMSTS-SSPIPRLLVR 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V + R TPLLVQ+FVIF+GLP+IGI ++ I+L LN Y++EI+R I + + Sbjct: 59 LHVEVVRNTPLLVQIFVIFFGLPNIGIRLSPLTSVFIALVLNNGGYVAEIVRGGIEATHR 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q +A+ ++GL+ QT+R++ILP + P+ S+ + ++ STS+ S I + ++ A Sbjct: 119 SQVEAAESLGLSYFQTLRYVILPPALEKVFTPVVSQCVLLMLSTSLVSAIGVEDLTGAAM 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 S T++ + IY +A VY++L Sbjct: 179 IASSETFRTMEIYLVVAMVYVVLN 202 >gi|227510176|ref|ZP_03940225.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227513104|ref|ZP_03943153.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227083679|gb|EEI18991.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227190381|gb|EEI70448.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 214 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/162 (34%), Positives = 97/162 (59%), Gaps = 5/162 (3%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +++ Y W+ RGTPLL+QL +FYGLP IGI+F+ + A + + LN++AY +EI R S Sbjct: 51 LLNLYDWLMRGTPLLLQLIFVFYGLPVIGIIFERYDAALFAFILNYTAYFAEIFRGGFQS 110 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ++++ + L+ QTIR II+PQ + +E I+++K +S+ I + ++ + Sbjct: 111 VPRGQFESARVLRLSYGQTIRKIIIPQVFKIVLPSIGNEVINLVKDSSLVYVIGLGDLLR 170 Query: 177 TAQRIVS--TTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 + T PL++ + +YL LT+ C I+ IE Sbjct: 171 AGNVATARDVTLLPLVL---VGIIYLALTAICTIVLKVIEKR 209 >gi|170754694|ref|YP_001780100.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum B1 str. Okra] gi|169119906|gb|ACA43742.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum B1 str. Okra] Length = 211 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/154 (37%), Positives = 96/154 (62%), Gaps = 5/154 (3%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + +I+ Y WIFRGTPL++QLF ++GLP IGI + A ++ +N+ AY++E R+ Sbjct: 47 LKIILSAYTWIFRGTPLMLQLFFAYFGLPVIGIRLEPLTAAYLTFIINYGAYLAETFRAG 106 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SI KGQ +A+ +G T QT+ II+PQ I P+ +E I+++K +++ + I I + Sbjct: 107 IESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKDSALVAAIGIGD 166 Query: 174 IFQTAQRIVST--TYQPLIIYCELAFVYLILTSF 205 + + A+ +V+ T P I A +YL++T+F Sbjct: 167 MLRAAKEVVTRDFTITPFFI---AAAIYLLITAF 197 >gi|163735167|ref|ZP_02142603.1| ABC transporter permease protein [Roseobacter litoralis Och 149] gi|161391625|gb|EDQ15958.1| ABC transporter permease protein [Roseobacter litoralis Och 149] Length = 225 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 111/199 (55%), Gaps = 4/199 (2%) Query: 3 YEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 YEW F +I++ LL+ ++ TL I + L +G +A+ R+ ++ F Sbjct: 2 YEWDFTAVIEN-SDLLWQGLLGTLAITGTALAFGLPLGLMLALSRLS-PRKWLAWSAGFV 59 Query: 62 VWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + FR TP LVQLF F+ LP + I ++A I+ ++ SA+ +E+ R+ I+SI +G Sbjct: 60 IEFFRTTPPLVQLFWFFFALPILMDIQMTPYLAAAITFSIQSSAFFAEVFRAGIVSIERG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ AIG+ R Q +R IILPQ I + I ++K+T++ +T++ ++ A Sbjct: 120 QWEAARAIGMQRPQAMRRIILPQAIKRMIPAFTERSIELMKTTTLVATVSYADLLYQANE 179 Query: 181 IVSTTYQPLIIYCELAFVY 199 + T++P+ I+ A +Y Sbjct: 180 LAQKTFRPIEIFTATALIY 198 >gi|319899030|ref|YP_004159123.1| ABC transporter, permease protein [Bartonella clarridgeiae 73] gi|319402994|emb|CBI76549.1| ABC transporter, permease protein [Bartonella clarridgeiae 73] Length = 235 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 127/223 (56%), Gaps = 12/223 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L++ + L +VTL + IS + L++G I IR+ ++ I+ + Y++ FR Sbjct: 13 LLLSRYSLKLIDGFIVTLKLVSISCSMGLLLGILITFIRLS-NNKILQYLARAYIYFFRS 71 Query: 68 TPLLVQLFVIFYGL-------PHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISI 117 +PLL QLF+ +YGL IG+ + +++ + +LN +AY +EI R S++++ Sbjct: 72 SPLLAQLFLFYYGLGSLNNFWEQIGLWWFFQNAWYCCLFIFSLNSAAYQAEIFRGSLLAV 131 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 Q +AS A+GL+R T IILPQ + T+ PL +EFI + KS+++AS +T+ ++ T Sbjct: 132 ATEQREASKALGLSRSITFFKIILPQAMVTALRPLGNEFILMTKSSTIASLVTVYDLMGT 191 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + I S T+ +Y +A +YLI+ + I IE +T++ Sbjct: 192 TKLIYSRTFD-FQVYIWVAIIYLIIVELIHRFIILIEHYLTRY 233 >gi|227818924|ref|YP_002822895.1| amino acid ABC transporter permease [Sinorhizobium fredii NGR234] gi|227337923|gb|ACP22142.1| amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 226 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 75/208 (36%), Positives = 117/208 (56%), Gaps = 12/208 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +L+ + P LL A +TL I+ + L G +AVIR ++S Y +F Sbjct: 3 LDLVTYAVPFLLVGA-KITLLISVFGVALGLPFGIALAVIRAS-KHRMLSRSADIYCAVF 60 Query: 66 RGTPLLVQLFVIFYGLPHIG----------IVFDSFVAIIISLTLNFSAYISEIIRSSII 115 RGTP+LVQ+FVI+YGL + IV DS A I+++ LN AY +EI R++++ Sbjct: 61 RGTPMLVQIFVIYYGLGQLSAIRSNPVIWWIVGDSLHAAILAVVLNTGAYTAEIFRTALL 120 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+P+G +AS A GL+ T RH+ P + + SSE I+K +S+ASTIT+ EI Sbjct: 121 SLPRGLIEASQACGLSVWSTFRHVRFPLAVRQALPAYSSEVAIIVKESSLASTITVLEIT 180 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 A+R++S T+ + I+ + YL++ Sbjct: 181 GYAKRLMSETFAIMDIFIITSAFYLMMN 208 >gi|319792873|ref|YP_004154513.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315595336|gb|ADU36402.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 217 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 71/210 (33%), Positives = 123/210 (58%), Gaps = 3/210 (1%) Query: 12 SFPQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 FP+ L+ A TL ++ I+FV I+G IA++R S + M F + +F+GTP Sbjct: 5 GFPEFLFILEAAQWTLALSAIAFVGGAILGLIIALMRTSDSTWARNASMVF-IQVFQGTP 63 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+QLF+IF+G P +G+ + ++A ++L LN +A++ EI R I +IP+GQW+A+ A+ Sbjct: 64 LLLQLFLIFFGAPVLGLDINPWIAAGVALILNSAAFLGEIWRGCIEAIPRGQWEAAEALS 123 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L +R ++LPQ + P + I+K TS+A+ I EI + Q I + T+QPL Sbjct: 124 LKYGARMRDVVLPQAFKIALAPTVGYLVQIIKGTSLAAIIGFTEITRAGQIINNATFQPL 183 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 I++ +A +Y ++ ++ ++E + Sbjct: 184 IVFSVVAAIYFVICWPLSLLAARMERKRAR 213 >gi|28872471|ref|NP_795090.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|213971203|ref|ZP_03399321.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301382332|ref|ZP_07230750.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302060017|ref|ZP_07251558.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302132164|ref|ZP_07258154.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28855726|gb|AAO58785.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213924072|gb|EEB57649.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|330874240|gb|EGH08389.1| amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330968062|gb|EGH68322.1| amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 229 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 123/207 (59%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +II P+L A +TL + I+ + LI+ + + R + +L + Y++ F Sbjct: 3 WEVIIKWLPRLAQGA-TLTLELVAIAVIAGLILAIPMGIARASRHWPVRALP-YAYIFFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+++YGL V D F ++++TL+ +AYI+EI+R +I + Sbjct: 61 RGTPLLVQLFLVYYGLAQFDAVRQGPLWPYLRDPFWCAVVTMTLHTAAYIAEILRGAIQA 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P G+ +A+ A+G+++ + + +I+LP+ S+E I +LK++++AST+T+ E+ Sbjct: 121 VPVGEVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I++ TY P+ I+ YL++T Sbjct: 181 MARTIIARTYLPVEIFFAAGMFYLVMT 207 >gi|311695810|gb|ADP98683.1| amino acid ABC transporter, permease protein [marine bacterium HP15] Length = 223 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 4/203 (1%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 +++W IDS P L I TL I+ +I +G F ++ I + Y Sbjct: 6 QFDW-QAAIDSIP-FLIKGIPYTLLISFGGLLIGFALGIFFGLLSIN-KKWFLRWPATAY 62 Query: 62 VWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + IFRGTP+LVQ+ IFYGLP IG D A I ++ LN AYISE++R + SI KG Sbjct: 63 IEIFRGTPILVQVLFIFYGLPDLIGGPIDPLTAGIAAIALNSGAYISEVVRGGVQSIDKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A ++GL+R QT ++ PQ PL ++ I +K TS+ S I + E+ + Q Sbjct: 123 QTEAGLSLGLSRTQTFWSVVWPQAFRRMIPPLGNQAIVSIKDTSLFSVIGVGELVRQGQI 182 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 ++ T+ +Y +A +YL +T Sbjct: 183 YIANTFTAFEVYFVVAILYLAIT 205 >gi|228992897|ref|ZP_04152822.1| Arginine transport system permease protein artQ [Bacillus pseudomycoides DSM 12442] gi|228998942|ref|ZP_04158525.1| Arginine transport system permease protein artQ [Bacillus mycoides Rock3-17] gi|229006473|ref|ZP_04164126.1| Arginine transport system permease protein artQ [Bacillus mycoides Rock1-4] gi|228754786|gb|EEM04178.1| Arginine transport system permease protein artQ [Bacillus mycoides Rock1-4] gi|228760817|gb|EEM09780.1| Arginine transport system permease protein artQ [Bacillus mycoides Rock3-17] gi|228766946|gb|EEM15584.1| Arginine transport system permease protein artQ [Bacillus pseudomycoides DSM 12442] Length = 219 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 124/215 (57%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I +S ++ I+G +A+ +I ++++ Y IF Sbjct: 5 FSAITPSIPYIL-KGLEVTLKIVAVSALVGFILGTLLALCKIA-RVRVLNIAADLYTSIF 62 Query: 66 RGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P IG +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 63 RGTPLVLQLMIIYFGVPQMIGYDIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ ++ +++IILPQ + L +EF ++ K ++V + I ++ + A + Sbjct: 123 AMALGVPYRKMMKNIILPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + VY IL ++ IE + + Sbjct: 183 TFKYLEPLLFVGLVYYILVIILTLVGKAIEGRMKK 217 >gi|126698331|ref|YP_001087228.1| amino acid ABC transporter permease [Clostridium difficile 630] gi|254974369|ref|ZP_05270841.1| amino acid ABC transporter, permease protein [Clostridium difficile QCD-66c26] gi|255091763|ref|ZP_05321241.1| amino acid ABC transporter, permease protein [Clostridium difficile CIP 107932] gi|255099867|ref|ZP_05328844.1| amino acid ABC transporter, permease protein [Clostridium difficile QCD-63q42] gi|255305755|ref|ZP_05349927.1| amino acid ABC transporter, permease protein [Clostridium difficile ATCC 43255] gi|255313493|ref|ZP_05355076.1| amino acid ABC transporter, permease protein [Clostridium difficile QCD-76w55] gi|255516181|ref|ZP_05383857.1| amino acid ABC transporter, permease protein [Clostridium difficile QCD-97b34] gi|255649277|ref|ZP_05396179.1| amino acid ABC transporter, permease protein [Clostridium difficile QCD-37x79] gi|255654801|ref|ZP_05400210.1| amino acid ABC transporter, permease protein [Clostridium difficile QCD-23m63] gi|260682448|ref|YP_003213733.1| amino acid ABC transporter permease [Clostridium difficile CD196] gi|260686047|ref|YP_003217180.1| amino acid ABC transporter permease [Clostridium difficile R20291] gi|306519377|ref|ZP_07405724.1| amino acid ABC transporter, permease protein [Clostridium difficile QCD-32g58] gi|115249768|emb|CAJ67585.1| ABC-type transport system, aminoacid-family permease [Clostridium difficile] gi|260208611|emb|CBA61332.1| amino acid ABC transporter, permease protein [Clostridium difficile CD196] gi|260212063|emb|CBE02647.1| amino acid ABC transporter, permease protein [Clostridium difficile R20291] Length = 225 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 58/158 (36%), Positives = 98/158 (62%), Gaps = 10/158 (6%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF-------DSFVAIIISLTLNFS 103 ++ I Y+ + RGTPLLVQ++++++GLP +GI F F+A +L++N Sbjct: 48 SKVLRAISSIYIEVLRGTPLLVQIYIVWFGLPQLGIRFPMLFGIPSEFIASAFALSVNSG 107 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AY++EI+RS I S+ GQ +AS ++GL T+R+II+PQ I L++EFI+++K + Sbjct: 108 AYVAEILRSGIQSVDNGQMEASRSLGLNYWSTMRYIIIPQAIKNILPSLANEFITLVKES 167 Query: 164 SVASTITIPEIFQTAQRIVSTTY---QPLIIYCELAFV 198 S+ S I + EI +TA + + + +PLI+ + FV Sbjct: 168 SIISVIGVVEIMRTADIVKNAAFRALEPLIVAAAIYFV 205 >gi|242243079|ref|ZP_04797524.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis W23144] gi|242233427|gb|EES35739.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis W23144] Length = 485 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/187 (33%), Positives = 111/187 (59%), Gaps = 6/187 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVI 77 I T+ I+ + V+ I+G FIA++++ I L I Y+ RGTP+LVQ+F++ Sbjct: 284 GIKNTILISLVGVVLGSILGSFIALLKL---SKIRPLQWIAGIYIEFLRGTPMLVQVFIV 340 Query: 78 FYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 F+G +G+ + + I+L +N SAYI+EI R+ I ++ KGQ +A+ ++G+ +QT+ Sbjct: 341 FFGTTAALGLDISALICGTIALVINSSAYIAEIFRAGINAVDKGQTEAARSLGMNYRQTM 400 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 + +++PQ I L +EF++++K +S+ STI + EI AQ + ++ P A Sbjct: 401 QSVVMPQAIKKILPALGNEFVTLIKESSIVSTIGVSEIMFNAQVVQGISFDPFTPLLVAA 460 Query: 197 FVYLILT 203 +Y +LT Sbjct: 461 LLYFLLT 467 >gi|322516335|ref|ZP_08069261.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] gi|322125173|gb|EFX96562.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] Length = 732 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 116/204 (56%), Gaps = 9/204 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 LI +++ QLL + +SF I++IIG ++ + + T+ +I +V + RG Sbjct: 517 LIKNNYKQLLQGLGITLGLTL-LSFAIAMIIGVLFGMMAVAPNQTL-RVISQVFVDVVRG 574 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ I++G+P++ + FVA I+L+LN AYI+EI+R I ++P G Sbjct: 575 IPLMIVAAFIYWGIPNLIENITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPIG 634 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G+ T+R +ILPQ + ++F+ LK T++ S I + E+FQT + Sbjct: 635 QMEASRSLGVPYNTTMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKI 694 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 I++ YQ +Y LA +YL++ + Sbjct: 695 IIARNYQSFRMYAILAILYLVIIT 718 >gi|191638945|ref|YP_001988111.1| Glutamine transport system permease protein [Lactobacillus casei BL23] gi|190713247|emb|CAQ67253.1| Glutamine transport system permease protein [Lactobacillus casei BL23] Length = 220 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 115/202 (56%), Gaps = 8/202 (3%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W NL + L + VTL ++ +S S I+G + + R + S I+ F + Sbjct: 8 YSWINL------RYLLQGLGVTLEVSIVSIFFSFILGVILGLAR-YVKIKYFSAIVGFVI 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + R PLL+ LF ++ LP IGI + A II++++ SA ++EI+RS I ++P+GQ Sbjct: 61 DVIRNLPLLLILFFTYFALPDIGIRLNVVAAAIIAMSIFESAMLAEIVRSGINAVPRGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ + GLT Q +R+II+PQ + P+ S+FIS++K TS+A+ I +PE AQ I Sbjct: 121 EAARSNGLTFYQAMRYIIMPQALKKMIPPIVSQFISLVKDTSLATIILLPEATYHAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLILT 203 +I ++ LA +Y ++ Sbjct: 181 GQNINYMIPMFVALALMYFVVN 202 >gi|327441796|dbj|BAK18161.1| ABC-type amino acid transport system, permease component [Solibacillus silvestris StLB046] Length = 227 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 73/219 (33%), Positives = 132/219 (60%), Gaps = 9/219 (4%) Query: 6 FNLIIDSFPQLL-YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 F +I+ FP+++ Y IV L + +SF++++IIG AVI I F +I I+ + Sbjct: 5 FGYMIEIFPRIIEYLPIV--LYMGTLSFILAVIIGLLFAVI-INFKVPVIYQILIVIISY 61 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 FRG P L+Q+F+ ++G+P + F D+ A+I +L++ +AY+SE+ RS+ +++ KGQ Sbjct: 62 FRGVPTLIQIFIFYFGIPQLFPSFSSLDAITAVIFALSVKNAAYLSEVFRSAFLAVDKGQ 121 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSE-FISILKSTSVASTITIPEIFQTAQR 180 ++A A+ +T+ Q +R +ILPQ + A+P S +I ++K TS+A TI + ++ A+ Sbjct: 122 FEACDAMNMTKWQGLRTVILPQVLRV-AIPASGNYYIMMIKETSLAFTIGVVDMLARAKL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + TY+ L Y + +Y +T +Q K+E+ V + Sbjct: 181 ESAVTYKFLEAYLTVGLIYWTITVILAFLQSKLENYVER 219 >gi|300781314|ref|ZP_07091168.1| ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium genitalium ATCC 33030] gi|300533021|gb|EFK54082.1| ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium genitalium ATCC 33030] Length = 305 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 119/211 (56%), Gaps = 27/211 (12%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + ++ +I +++G +AV+R+ + + I Y+W+FRGTP+ VQL +F+GL Sbjct: 66 TLALTVLAMIIGVVLGVILAVMRMS-PNPVFKSIAWLYLWVFRGTPVYVQL--VFWGL-- 120 Query: 84 IGIVFD-----------------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 +G ++ +F ++ L LN + Y++EI+RS I S+P+GQ +AS Sbjct: 121 LGAIYQTVNLGFTEISMEALTSSAFALAVLGLGLNEAGYMAEIVRSGINSVPEGQIEASK 180 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP---EIFQTAQRIVS 183 A+G+ T+R +LPQ + P +EFIS+LK++S+ + IP E++ +Q I + Sbjct: 181 ALGMGWGMTMRRTVLPQAMRIIIPPTGNEFISLLKTSSL--VVAIPYSLELYGRSQDIAA 238 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 ++P+ + A YL++TS I Q +E Sbjct: 239 ALFEPVPMLLVAATWYLVITSILMIGQYYLE 269 >gi|330971469|gb|EGH71535.1| ABC transporter permease protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 223 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/218 (31%), Positives = 117/218 (53%), Gaps = 2/218 (0%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W L + + QLL + TL ++ +++G A+ R+ ++ ++ YV Sbjct: 4 YHWDFLSLLQYKQLLITGLWYTLGTTVACTILGMLVGILTALPRLS-NNKVLCAPFRAYV 62 Query: 63 WIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 IFR TP+LVQL +Y LP + G+ + A ++ L+L A+ SEI R I+SI +GQ Sbjct: 63 EIFRCTPVLVQLVWFYYALPVVTGMQIGAMTAALLCLSLYGGAFYSEIFRGGIMSIDEGQ 122 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ A+G+ R Q + I++PQ + PL ++ I LK+TS+ S + +P++ Q I Sbjct: 123 SEAARALGMRRFQVMWRIVIPQALRRMIPPLVNQSIMQLKNTSLLSVLALPDLLYQGQVI 182 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 +Y+PL +Y +A Y I+ II ++E + Sbjct: 183 AHDSYRPLEVYSVVAVAYFIILLPATIISKRLEGRAGR 220 >gi|119383896|ref|YP_914952.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119373663|gb|ABL69256.1| amino acid ABC transporter membrane protein 1, PAAT family [Paracoccus denitrificans PD1222] Length = 219 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 121/209 (57%), Gaps = 10/209 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMHFYVWIFRG 67 D+FP+LL AA+ L IA ++ ++LI G + V+R I I +++ F RG Sbjct: 10 DAFPRLLPAALT-NLTIALVAMTLALIGGTVLTVLRTTGIGLLTGAIGVLISF----IRG 64 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TP+LVQ+F+ +YGLP +G+ A ++++ LN S +I+EI+R + + G +A+ A Sbjct: 65 TPILVQIFLFYYGLPALGLDLTPIQAGVLAIALNSSIFITEIMRGGLSGMDPGPVEAAIA 124 Query: 128 IGLTRKQTI-RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +G+ R +TI +ILPQ PL +E +I+K T++ S IT+ E+ +TAQ+I +TT+ Sbjct: 125 LGV-RARTIWTRVILPQLYIRILPPLVNELTTIVKGTALLSVITVVEVLRTAQQIANTTF 183 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIES 215 +PL A V L + +IE+ Sbjct: 184 RPLEALLAAAIVLFALNLAISQLGRRIET 212 >gi|227878268|ref|ZP_03996232.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256844162|ref|ZP_05549649.1| ABC transporter [Lactobacillus crispatus 125-2-CHN] gi|256850466|ref|ZP_05555893.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-1A-US] gi|262047795|ref|ZP_06020746.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-3A-US] gi|293381403|ref|ZP_06627402.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] gi|312976725|ref|ZP_07788474.1| amino acid ABC transporter, permease protein [Lactobacillus crispatus CTV-05] gi|227862138|gb|EEJ69693.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256614067|gb|EEU19269.1| ABC transporter [Lactobacillus crispatus 125-2-CHN] gi|256712671|gb|EEU27665.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-1A-US] gi|260571924|gb|EEX28494.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-3A-US] gi|290922011|gb|EFD99014.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] gi|310896053|gb|EFQ45118.1| amino acid ABC transporter, permease protein [Lactobacillus crispatus CTV-05] Length = 215 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 98/161 (60%), Gaps = 5/161 (3%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +++FYVWI RGTPLL+QL +FYGLP I IVF + A + + LN++AY +EI R S Sbjct: 52 LVNFYVWIMRGTPLLLQLIFVFYGLPIIHIVFPRYQAALFAFVLNYAAYFAEIFRGGFQS 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ++A+ + L+R QT+ II+PQ I + +E I+++K +S+ I + ++ + Sbjct: 112 IDEGQFEAAKVLRLSRWQTMTKIIIPQVIKIVLPSIGNEVINLVKDSSLVYVIGLGDLLR 171 Query: 177 TAQRIVS--TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 ++ T PL++ + +YL+L S C + K+E Sbjct: 172 AGNVAMARDVTLVPLVL---VGVIYLLLISICAFVLKKLEK 209 >gi|186472111|ref|YP_001859453.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184194443|gb|ACC72407.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 218 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 55/164 (33%), Positives = 100/164 (60%), Gaps = 4/164 (2%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I+ YV +F+GTPLL+QLF+ F+GLP +G+ +VA ++LTL SAY+ +I R + + Sbjct: 52 IVVLYVELFQGTPLLMQLFLAFFGLPLMGVDVSPWVAATVTLTLYTSAYLVDIWRGCVEA 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQW A ++G+T Q +R+++ PQ + + P + ++KST++ S I E+ + Sbjct: 112 VPRGQWAAGASLGMTFAQQLRYVVWPQALKIAVAPTVGFLVQVVKSTALTSIIGFTELTK 171 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIESS 216 T I + ++P IY +A +Y LT + +++ K +++ Sbjct: 172 TGTMITNAAFRPFPIYGMVAVLYFAMCFPLTWWARLLERKQKAT 215 >gi|261409441|ref|YP_003245682.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Paenibacillus sp. Y412MC10] gi|261285904|gb|ACX67875.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Paenibacillus sp. Y412MC10] Length = 217 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 106/186 (56%), Gaps = 30/186 (16%) Query: 25 LPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF-------------------YVWIF 65 +P + I F+ +L+ G I +I FFS I+++ M F YV IF Sbjct: 1 MPNSWIDFLPTLLKGAEITIIVAFFS-AILAIAMSFAAGLCRLSKLWIVRTATAVYVEIF 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGT LLVQLF +++ LP IGI +A I+++ LNF AY SEI+RS+++++PKGQW+A+ Sbjct: 60 RGTSLLVQLFWLYFALPFIGIELPKMLAAILAIGLNFGAYGSEIVRSAVLAVPKGQWEAA 119 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+ + Q + ++ILPQ P ++ + ++KSTS+ IT+ ++ T Sbjct: 120 VALNMKPWQRLWNVILPQASLRMLPPFGNQLVELIKSTSLVYFITMADL----------T 169 Query: 186 YQPLII 191 YQ +++ Sbjct: 170 YQAMVL 175 >gi|157828045|ref|YP_001494287.1| amino acid ABC transporter permease protein [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932742|ref|YP_001649531.1| hypothetical protein RrIowa_0212 [Rickettsia rickettsii str. Iowa] gi|157800526|gb|ABV75779.1| amino acid ABC transporter permease protein [Rickettsia rickettsii str. 'Sheila Smith'] gi|165907829|gb|ABY72125.1| hypothetical protein RrIowa_0212 [Rickettsia rickettsii str. Iowa] Length = 218 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 122/207 (58%), Gaps = 7/207 (3%) Query: 5 WFNLIIDSFPQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 F +I +P++ + +VTL + I+ + L+IG +A+ ++ + + L +FY Sbjct: 1 MFEYLIKFYPKIFFIVEGTLVTLKYSVIAVIFGLVIGMLLAICKVN-KNHALRLFANFYT 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 IFRGTPLL+QL +I++ P+I GI F F+A I+ +LN AY+SE+IR+ I ++ KGQ Sbjct: 60 SIFRGTPLLIQLSIIYFASPYIIGIKFSVFMAGAIAFSLNSGAYVSEVIRAGINAVDKGQ 119 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++A+ A+ + + + IILPQ + L +E ++++K +++ S + ++ + AQ + Sbjct: 120 FEAAEALAIPKFLITKDIILPQAVKNIFPSLVNELVNLIKESAIISMLGEMDLMRRAQIV 179 Query: 182 VSTTYQ---PLIIYCELAFVYLILTSF 205 TY P++I ++ ++L SF Sbjct: 180 SIETYNYFFPMLIAACCYYILVMLISF 206 >gi|315124397|ref|YP_004066401.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018119|gb|ADT66212.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 247 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 73/196 (37%), Positives = 112/196 (57%), Gaps = 21/196 (10%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL----FVI 77 ++TL + + +I +IIGF +A++R F ++ I+ Y+ I RGTP+++QL FVI Sbjct: 53 LITLLLTACAVIIGVIIGFSLAILR-FSKFKTLNFIIDEYIDIIRGTPVILQLMIFAFVI 111 Query: 78 FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 F D+ A I++L LN SAYI+EI+RS I S+ KGQ +A+ A+GL K +++ Sbjct: 112 F-------TFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMK 164 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 IILPQ L++EFIS+ K TSV I++ +I +Q + + Y P I Sbjct: 165 EIILPQATKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNPKPI------ 218 Query: 198 VYLILTSFCYIIQIKI 213 I T F Y + +KI Sbjct: 219 ---IFTGFVYYVSVKI 231 >gi|158423074|ref|YP_001524366.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158329963|dbj|BAF87448.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 213 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/177 (32%), Positives = 110/177 (62%), Gaps = 3/177 (1%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 ++ I+FV+ + G +A++R ++ + Y+ +F+GTPLL+QLFV++YGL +GI Sbjct: 19 LSAIAFVLGGVGGLAVALLRTS-GVPLLERVTAGYISLFQGTPLLMQLFVVYYGLALVGI 77 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 + + A+ + TL+ SAY+ EI R SI ++P+GQ +AS+A+ L +R ++LPQ I Sbjct: 78 RLNPWAAVSVGFTLHASAYLGEIWRGSIEAVPRGQTEASHALSLGYVSRMRDVVLPQAIR 137 Query: 147 TSAVPLSSEF-ISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 S +P + F + ++K TS+AS + E+ + + + +QPL+++ + +Y ++ Sbjct: 138 IS-LPATIGFLVQLIKGTSLASIVGFTELARAGNIVSNQIFQPLLVFGIVGILYFLM 193 >gi|227529679|ref|ZP_03959728.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] gi|227350469|gb|EEJ40760.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] Length = 227 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/160 (35%), Positives = 95/160 (59%), Gaps = 1/160 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I+ YVW+ RGTPLL+QL +FYGLP IGIVF + A +++ LN++AY +EI R S Sbjct: 64 ILEIYVWLMRGTPLLLQLIFVFYGLPIIGIVFQRYDAALVAFILNYAAYFAEIFRGGFQS 123 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + GQ++A+ + L QT+R II+PQ + + +E I+++K +S+ I + ++ + Sbjct: 124 VSVGQYEAAKVLRLNYWQTVRKIIIPQVVKIVIPSIGNEVINLVKDSSLVYVIGLGDLLR 183 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 A + ++ LI + +YLIL C ++ ++E Sbjct: 184 -AGNVATSRDVTLIPLLLVGLIYLILVGICTLVLRQVEKR 222 >gi|271502392|ref|YP_003335418.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270345947|gb|ACZ78712.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 227 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 125/216 (57%), Gaps = 9/216 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ FPQ+L + TL +A +S ++++++G +A++R ++S ++ FY+ +FRG Sbjct: 12 LLKVFPQVLMY-LPTTLLLAVVSMLVAIVLGLVLALVRES-RFVVVSKLVEFYISLFRGI 69 Query: 69 PLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 P LVQLF+I++GLP + G+ + A II +L SAY++EI R+++ S+ GQ + Sbjct: 70 PSLVQLFIIYFGLPQLFPSLNGL--SAMTAAIIGFSLKNSAYMAEIFRAALASVDFGQTE 127 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A ++G+ + Q R I+LPQ + + + FIS++K TSVA + + E+F + I + Sbjct: 128 AGLSVGMNKVQIYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFAEGKMIAA 187 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + + + + +Y +L +Q ++E ++ Sbjct: 188 ESLRFFETFLVVGLIYWMLIVVYSWLQSQLEKKLSH 223 >gi|253755502|ref|YP_003028642.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis BM407] gi|251817966|emb|CAZ55746.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis BM407] Length = 732 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 122/214 (57%), Gaps = 9/214 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ +++ QLL + + +T+ +A +SF I+++IG + + + + +V + RG Sbjct: 517 LLKNNYGQLL-SGLGITIGLALLSFAIAIVIGIIFGMFAVS-PVKALRVTSSVFVDVVRG 574 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ IF+G+P++ + FVA I+L+LN SAYI+EI+R I ++P G Sbjct: 575 IPLMIVAAFIFWGIPNLIESMTGQQSPINDFVAGTIALSLNSSAYIAEIVRGGIQAVPAG 634 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G++ T+R IILPQ ++F+ LK T++ S I + E+FQ + Sbjct: 635 QMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTTIISAIGLVELFQAGKI 694 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I++ YQ +Y LA +YL++ + + K+E Sbjct: 695 IIARNYQSFRMYAILAIIYLVVITLLTRLARKLE 728 >gi|116491637|ref|YP_811181.1| ABC-type amino acid transport system, permease component [Oenococcus oeni PSU-1] gi|290891246|ref|ZP_06554308.1| hypothetical protein AWRIB429_1698 [Oenococcus oeni AWRIB429] gi|116092362|gb|ABJ57516.1| amino acid ABC transporter membrane protein, PAAT family [Oenococcus oeni PSU-1] gi|290479210|gb|EFD87872.1| hypothetical protein AWRIB429_1698 [Oenococcus oeni AWRIB429] Length = 220 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 59/163 (36%), Positives = 95/163 (58%), Gaps = 8/163 (4%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +++ YVW+ RGTPL++QL +++GLP + IVF A ++ LN+S Y +EI R Sbjct: 50 LLNAYVWVIRGTPLMLQLMFVYFGLPIASNNEIVFPKMTAAVVVFILNYSGYFAEIFRGG 109 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I +IP+ Q+DA+ +G+ R+QT + IILPQ +E I+++K TS+ I++ + Sbjct: 110 IQAIPQAQYDAAGVLGINRRQTFQKIILPQVFNIVLPSFGNEIINLIKDTSLGYVISLVD 169 Query: 174 IFQTAQR--IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I AQ + T P Y +A +YLI T+ +I +IE Sbjct: 170 ILYIAQGHAVADVTLLP---YVIVAAIYLIFTALATLIMKRIE 209 >gi|323489869|ref|ZP_08095093.1| polar amino acid ABC transporter, inner membrane subunit [Planococcus donghaensis MPA1U2] gi|323396504|gb|EGA89326.1| polar amino acid ABC transporter, inner membrane subunit [Planococcus donghaensis MPA1U2] Length = 214 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 113/195 (57%), Gaps = 3/195 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 II++FP L+ + VTL I I+ V+ +IG +A+ R+ I++ I +V RGT Sbjct: 4 IINAFPYLM-EGLKVTLYIFAIAIVLGFLIGLIVALFRLA-PLKILNWIAKIFVDAIRGT 61 Query: 69 PLLVQLFVIFYGLPHIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 P +VQLF I++GL + I D+ A I+++ +N AY SEIIR+ I SI KGQ +A+ + Sbjct: 62 PFIVQLFFIYFGLNSLAFISLDNTTAGIVTVAINAGAYFSEIIRAGIQSIDKGQTEAARS 121 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL Q +R+I+LPQ ++++ I LK TS+ S I + ++ Q + S T+ Sbjct: 122 LGLNSTQNMRYIVLPQAFRRMLPTITNQAIISLKDTSLLSVIGVADLTQEGRIQASATFD 181 Query: 188 PLIIYCELAFVYLIL 202 +Y L +Y ++ Sbjct: 182 AFNVYLILGIIYFVV 196 >gi|317054413|ref|YP_004118438.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316952408|gb|ADU71882.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 307 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 75/235 (31%), Positives = 129/235 (54%), Gaps = 27/235 (11%) Query: 2 KYEWFNLIIDSF--PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 ++EW +I ++F P +L +++TL + IS V+ G +A++R+ S+ ++ + Sbjct: 44 RFEW-GVIAENFTGPSIL-QGVLMTLQLTAISVVLGFAFGTVLALMRLS-SNPVLVAVSW 100 Query: 60 FYVWIFRGTPLLVQLFV----------IFYGLPHIGIVFDS--------FVAIIISLTLN 101 Y W FRG P+LVQLF+ I +P +G ++ + F A +I+L ++ Sbjct: 101 AYTWFFRGVPMLVQLFLWYNIAALYPKIALSIPGLGEIWSAQSNSLVSPFSAAVIALVMH 160 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 SAY +EI+R+ I S+ GQ +A+ A+G Q RH +LPQ + P +E I LK Sbjct: 161 QSAYAAEIVRAGIQSVGNGQLEAARALGYRPAQIFRHTVLPQAMRAIMPPAGNEIIGQLK 220 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 +T+V S I++ ++ +AQ I TY+ PL++ L YL++TS + Q +E Sbjct: 221 TTAVVSVISLQDVLFSAQIIYQRTYEVIPLLLVATL--WYLLMTSVLSVGQYYVE 273 >gi|167564805|ref|ZP_02357721.1| ABC polar amino acid family transporter, inner membrane subunit [Burkholderia oklahomensis EO147] gi|167571973|ref|ZP_02364847.1| ABC polar amino acid family transporter, inner membrane subunit [Burkholderia oklahomensis C6786] Length = 222 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 124/198 (62%), Gaps = 1/198 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ +I + + + A+V T+ + + +S ++G I + R+ + Y+ F Sbjct: 5 FSPVIAGWTDIAHGALV-TVEVTAAALALSCVLGLLIGIGRLAPQRRFVYGFCTAYLTFF 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQLF++F+GLP I+ +FV ++ L +AY+SEI+R +I S+ +GQ +A+ Sbjct: 64 RGTPLLVQLFLLFFGLPQFNILLPAFVCGMLGLGFYSAAYVSEIVRGAIQSVDRGQMEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IG++ Q +R IILPQ + PL +EFI+++K++++ S +TI ++ Q+I+S + Sbjct: 124 RSIGMSSGQAMRAIILPQAVVRMIPPLGNEFIALIKNSALVSLLTINDLMHEGQKIISVS 183 Query: 186 YQPLIIYCELAFVYLILT 203 Y+ L +Y +A VYL+LT Sbjct: 184 YRSLEVYLAIALVYLVLT 201 >gi|257878816|ref|ZP_05658469.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257881454|ref|ZP_05661107.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|257885725|ref|ZP_05665378.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257890675|ref|ZP_05670328.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|260558382|ref|ZP_05830578.1| amino acid ABC transporter [Enterococcus faecium C68] gi|261207089|ref|ZP_05921778.1| amino acid ABC transporter [Enterococcus faecium TC 6] gi|257813044|gb|EEV41802.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257817112|gb|EEV44440.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|257821581|gb|EEV48711.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257827035|gb|EEV53661.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|260075556|gb|EEW63862.1| amino acid ABC transporter [Enterococcus faecium C68] gi|260078717|gb|EEW66419.1| amino acid ABC transporter [Enterococcus faecium TC 6] Length = 526 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 108/208 (51%), Gaps = 10/208 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISL 56 F I + + +TL IA I V+ +G I V R F I + Sbjct: 286 FTTIWKQYGNMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRSVPESGNALTRFFQKIGNA 345 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 ++ YV +FRGTP++VQ VIFYGL GI + +A + ++LN AY++EI+R I Sbjct: 346 LLSIYVEVFRGTPMMVQAMVIFYGLALAFGISLNRTIAALFIVSLNTGAYMTEIVRGGIF 405 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ +GQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++F Sbjct: 406 AVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADLF 465 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 +Q + + +YL++T Sbjct: 466 FQGNSASGANFQFFQTFTIVGIIYLVMT 493 >gi|111225333|ref|YP_716127.1| amino acid ABC transporter membrane protein [Frankia alni ACN14a] gi|111152865|emb|CAJ64612.1| putative amino acid transport protein (ABC superfamily, membrane) [Frankia alni ACN14a] Length = 333 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 75/239 (31%), Positives = 127/239 (53%), Gaps = 23/239 (9%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++W + F + + + T+ + I+ I ++ G +A++R+ + +++ Y+ Sbjct: 90 FQWGTVGDYLFAEPVLRGLWATVYLTVIAMAIGIVGGIVLAILRMS-PNPVVAGAAWLYI 148 Query: 63 WIFRGTPLLVQ-LFVIFYGL--PHI--GIVFDS-------------FVAIIISLTLNFSA 104 W FRGTPLLVQ LF F G P + GI F F A ++ L LN +A Sbjct: 149 WFFRGTPLLVQILFWSFVGALYPRLSLGIPFGPSFVSGDANHIVPLFAAAVLGLGLNEAA 208 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 Y++EI+R+ I + GQ +A+ A+G++R +R I+LPQ + T P +E IS+LK+TS Sbjct: 209 YMAEIVRAGINGVDAGQTEAASALGMSRALALRRIVLPQAMRTIIPPTGNETISMLKTTS 268 Query: 165 VASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + S I+ E+ + + + T+Q PL+I A YL LTS + Q ++E + T Sbjct: 269 LVSVISYNELLNATRIVYARTFQTIPLLIVA--ALWYLALTSVLTLGQHQLERRFARGT 325 >gi|238024848|ref|YP_002909080.1| ABC-type amino acid transport system, permease [Burkholderia glumae BGR1] gi|237879513|gb|ACR31845.1| ABC-type amino acid transport system, permease component [Burkholderia glumae BGR1] Length = 216 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 52/147 (35%), Positives = 91/147 (61%), Gaps = 3/147 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ +F+GTPLL+QLFV+F+GLP +G+ ++A + LT SAY++EI R + ++P+G Sbjct: 56 YIEVFQGTPLLMQLFVVFFGLPLVGLDVPPWLAATLGLTFFTSAYLAEIWRGCVEAVPRG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+AS ++ ++ + +RH+ILPQ + P + +K T++ S I E+ + Sbjct: 116 QWEASASLAMSYLEQLRHVILPQAARIAVGPTVGFGVQAIKDTALVSIIGFTELTKAGTM 175 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCY 207 I + T++P ++Y +A +Y L CY Sbjct: 176 ISNATFRPFLVYGLVALIYFAL---CY 199 >gi|170741316|ref|YP_001769971.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168195590|gb|ACA17537.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 222 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/176 (34%), Positives = 102/176 (57%), Gaps = 1/176 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ I+ V +GF IA+ RI + + YV + +GTPLLV +F+ F+GLP Sbjct: 20 TIGLSLIALVGGGALGFVIALCRIS-ALRAVRFASGAYVQLIQGTPLLVIMFLTFFGLPP 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ A SLT+ AY+ EI R +I S+P+ QW+A+ + L+R Q + +ILPQ Sbjct: 79 LGLRVSPLTAAGASLTIYVGAYLGEIWRGAIQSVPRPQWEAAEGLALSRAQRMTKVILPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 + + P + I+K+TS+AS + E+ + Q I ++ ++P +IY +A VY Sbjct: 139 AVRIATPPTVGFMVQIVKNTSLASVVGFVELARAGQIINNSLFEPFLIYAIIAAVY 194 >gi|295697136|ref|YP_003590374.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus tusciae DSM 2912] gi|295412738|gb|ADG07230.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus tusciae DSM 2912] Length = 214 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 111/198 (56%), Gaps = 1/198 (0%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ + + V++LIIG F A+ R + + ++ YV + RGTP ++QLF +F+GL Sbjct: 17 VTVALTALGTVLALIIGLFGALARQY-GPWPLRAVVGAYVEVIRGTPQILQLFAVFFGLT 75 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 GI D+F A I L+ AY E+ R+ + SIP Q +AS A+G++R T+R +ILP Sbjct: 76 QYGIQLDAFTAAAIWLSAYGGAYAVELFRAGLHSIPHEQREASAALGISRWTTLRKVILP 135 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + T + S + +K++S+A TI + +I + A+ V+ T Q ++Y Y IL Sbjct: 136 QALATILPAMVSFLVLQVKNSSLAFTIGVMDIMRRAELGVNATSQATLLYLMAVAAYFIL 195 Query: 203 TSFCYIIQIKIESSVTQH 220 + I +E V Q+ Sbjct: 196 NFPLSRLGIALERRVAQY 213 >gi|311108044|ref|YP_003980897.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 16 [Achromobacter xylosoxidans A8] gi|310762733|gb|ADP18182.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 16 [Achromobacter xylosoxidans A8] Length = 222 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/191 (34%), Positives = 105/191 (54%), Gaps = 1/191 (0%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + + L+ I VTL + I+ V L IG AV+ + L + YV +FR TP L Sbjct: 11 RYREQLWDGIQVTLELTIIAVVAGLAIGLAGAVL-TRHGPKPVKLALRAYVEVFRNTPSL 69 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +QLFV+F+ LP +G+ FVA ++L+L F AY EI+R+ + SIP+ Q +A + +GL+ Sbjct: 70 IQLFVVFFVLPGLGLRMPPFVAAALALSLYFGAYAIEILRAGLDSIPRSQIEAGHCLGLS 129 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 Q RHI+L + L ++ + +L TS+AS ++ ++F I S TY+ + Sbjct: 130 TWQVYRHIVLAPALRNVYPALGTQLVILLLGTSLASQVSAEDLFHAGSFIESRTYRSFEV 189 Query: 192 YCELAFVYLIL 202 Y + +Y L Sbjct: 190 YAVICGIYFTL 200 >gi|301793689|emb|CBW36075.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae INV104] gi|332204479|gb|EGJ18544.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA47901] Length = 521 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 54/152 (35%), Positives = 95/152 (62%), Gaps = 1/152 (0%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ +++ Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R Sbjct: 338 LVGWVLNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVR 397 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I+++ KGQ++A+ A+G+T QT+R I LPQ + +EF+ +K TSV + I++ Sbjct: 398 GGILAVDKGQFEAATALGMTHNQTMRKIALPQVVRNILPATGNEFVINIKDTSVLNVISV 457 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E++ + + + TYQ + +A +Y +LT Sbjct: 458 VELYFSGNTVATQTYQYFQTFTIIAVIYFVLT 489 >gi|258405216|ref|YP_003197958.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] gi|257797443|gb|ACV68380.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] Length = 227 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/199 (33%), Positives = 114/199 (57%), Gaps = 3/199 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +++I +S P LL A +TL I + I+G ++R+ T I + YV Sbjct: 9 YSVIWESVPALLDGA-ELTLIITIVGCFFGFILGVTAGLLRLS-KVTAIKKVSGIYVESV 66 Query: 66 RGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL+VQ+ +++GLP +G+ A I+++ +N AYI+EI+R ++ SI GQ +A Sbjct: 67 RGTPLMVQVMFLYFGLPMALGMRIPPLTAGIVAIAVNSGAYIAEIVRGAVQSIEPGQVEA 126 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +IGLT QT+R+I+ PQ PL ++FI LK TS+ I + E+ ++ Q I++ Sbjct: 127 GRSIGLTAPQTMRYIVWPQAFKRMIPPLGNQFIISLKDTSLLVVIGVGELTRSGQEIIAV 186 Query: 185 TYQPLIIYCELAFVYLILT 203 ++ ++ +A +YL +T Sbjct: 187 NFRAFEVWLTVAVMYLAIT 205 >gi|300310495|ref|YP_003774587.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300073280|gb|ADJ62679.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 218 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 63/188 (33%), Positives = 112/188 (59%), Gaps = 2/188 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D P LL A+V T+ + SF++S +IG +A++++ + +L V I RG Sbjct: 6 VLDFLPILLKGALV-TVEVTIYSFLLSSVIGLLLALMKVSRLKPV-ALAGATIVNIIRGL 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P++VQLF I++ LP IGI +F A ++ L + +SAY +E R+ I ++ GQ +A+ +I Sbjct: 64 PIIVQLFYIYFVLPDIGIQLSAFQAGVVGLGIAYSAYQAENFRAGIEAVDMGQIEAAQSI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+ +R ++LPQ + P + + +LK +S+ STIT+ E+ + Q I S+T+Q Sbjct: 124 GMRGPLIMRRVVLPQAFRIALPPYGNTLVMMLKDSSLVSTITVLEMTRAGQMIASSTFQN 183 Query: 189 LIIYCELA 196 + +Y +A Sbjct: 184 MTVYTTVA 191 >gi|239833765|ref|ZP_04682093.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Ochrobactrum intermedium LMG 3301] gi|239821828|gb|EEQ93397.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Ochrobactrum intermedium LMG 3301] Length = 242 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/177 (36%), Positives = 98/177 (55%), Gaps = 1/177 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ +T +A S I I+ F + R F I+S I Y+ IFRGT LLVQLF Sbjct: 33 LFKGAQITAILALSSMAIGTILAFSAGIAR-FAGGPILSTIAVIYIEIFRGTSLLVQLFW 91 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++Y LP IGI FD I+ L LN AY +E++R ++ ++P+ Q +A+ A+ ++ T+ Sbjct: 92 LYYALPLIGISFDPVTTGIMGLGLNIGAYGAEVVRGALQAVPEAQHEAARALNFSKGHTL 151 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 H+ILPQ + + I LK T++AS I I ++ AQR+ + T + IY Sbjct: 152 FHVILPQAVVEMMPAFGNLAIHNLKDTALASLIAISDLTFQAQRLRNLTLDSVTIYS 208 >gi|220911892|ref|YP_002487201.1| polar amino acid ABC transporter inner membrane protein [Arthrobacter chlorophenolicus A6] gi|219858770|gb|ACL39112.1| polar amino acid ABC transporter, inner membrane subunit [Arthrobacter chlorophenolicus A6] Length = 233 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 119/218 (54%), Gaps = 3/218 (1%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 YE ++ + FP L A+ TL I + V + ++G+ IA +R+ + + YV Sbjct: 4 YEPGSVAAEYFPIFLAGALT-TLGIVAAAIVCATVLGYVIATLRLSRVRAL-RIFAAAYV 61 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 W FRG PL++ LF +Y P G+ D+F A +I+++LN +++ SEIIR+ + S+ G Sbjct: 62 WFFRGLPLMLSLFFFYYTKP-FGLTMDAFTAGLIAMSLNSASFFSEIIRAGLKSVNAGHL 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ ++G+ Q + P+ I P + I +LK ++ S IT+P++ Q+ Sbjct: 121 EAADSVGMNPLQKFVRVTAPEGIRLMTPPYINNCIIMLKESAQISVITVPDLMLQGQKAY 180 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++TY + +A +YL++TS ++Q+ IE + + Sbjct: 181 NSTYNVMETLGVVAAMYLVMTSLLMVLQLVIEKKMGRK 218 >gi|283833896|ref|ZP_06353637.1| glutamine ABC transporter, permease protein [Citrobacter youngae ATCC 29220] gi|291070567|gb|EFE08676.1| glutamine ABC transporter, permease protein [Citrobacter youngae ATCC 29220] Length = 219 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 123/219 (56%), Gaps = 5/219 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P L+ A +TL I+ + L+IG R F I + + Sbjct: 1 MQFDW-SAIWPAIPLLIEGA-KMTLWISILGLAGGLVIGLAAGFARTF-GGWIANHVALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R +TIRH+ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFSEAGLALGLSRTETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 Q I++ ++ L I+ +A YLI+T I ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRM 216 >gi|225375503|ref|ZP_03752724.1| hypothetical protein ROSEINA2194_01128 [Roseburia inulinivorans DSM 16841] gi|225212638|gb|EEG94992.1| hypothetical protein ROSEINA2194_01128 [Roseburia inulinivorans DSM 16841] Length = 414 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 15/207 (7%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHF 60 + N I D+ + + TL I + +I +++GF IA++R I++ + Sbjct: 194 YQNFIQDNRYAYMLKGLGNTLIITIFAVMIGIVLGFLIAIVRTSHDRNGGLGILNAVCKA 253 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF-----VAIIISLTLNFSAYISEIIRSSII 115 Y+ I RGTP+++QL +I+Y ++F S V +I+ LN +AY++EI+RS I+ Sbjct: 254 YLTIIRGTPVMIQLLIIYY------VIFQSINTGKIVVAVIAFGLNSAAYVAEIVRSGIM 307 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ GQ++A ++GL +QT+ IILPQ + L +EFIS+LK TS++ I + ++ Sbjct: 308 AVDIGQFEAGRSLGLNYRQTMTTIILPQAVKNILPALCNEFISLLKETSISGYIGLMDLT 367 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLIL 202 + I S TY+ + +A +YL++ Sbjct: 368 KGGDIIRSVTYEAFMPLIAVAVIYLLM 394 >gi|325289251|ref|YP_004265432.1| amino acid ABC transporter membrane protein 1, PAAT family [Syntrophobotulus glycolicus DSM 8271] gi|324964652|gb|ADY55431.1| amino acid ABC transporter membrane protein 1, PAAT family [Syntrophobotulus glycolicus DSM 8271] Length = 233 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 79/222 (35%), Positives = 126/222 (56%), Gaps = 16/222 (7%) Query: 7 NLIIDSFPQLLY---AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 N+ ID +L+ + VT+ +A +SF+ L +G IA++RI + I YV Sbjct: 3 NIGIDGLGKLVLQIAEKLPVTIFVAALSFMFGLALGVVIALVRIK-KRPVPYAIATLYVS 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSF-----VAI--IISLTLNFSAYISEIIRSSIIS 116 RGTP LVQLF+IFYGLP + ++ + VAI II+ +L+ +A++SE IRSS ++ Sbjct: 62 FMRGTPALVQLFLIFYGLPQLLLLLNIDINDWNVAIFAIITFSLHIAAFLSEAIRSSYLA 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + GQ +A+Y+IGL Q +R ++LPQ + S L + + +LK TSVA TI + +I Sbjct: 122 VGNGQLEAAYSIGLNDFQALRLVMLPQVLNLSLPTLGNNALILLKETSVAFTIGLVDIMG 181 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 AQ + Y + VYL+++ F +++ + IE V Sbjct: 182 QAQVYLQIHYG-----MNMFGVYLLISLFYWLLCLAIERGVA 218 >gi|294618488|ref|ZP_06698052.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E1679] gi|291595245|gb|EFF26574.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E1679] Length = 540 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 108/208 (51%), Gaps = 10/208 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISL 56 F I + + +TL IA I V+ +G I V R F I + Sbjct: 300 FTTIWKQYGNMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRSVPESGNALTRFFQKIGNA 359 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 ++ YV +FRGTP++VQ VIFYGL GI + +A + ++LN AY++EI+R I Sbjct: 360 LLSIYVEVFRGTPMMVQAMVIFYGLALAFGISLNRTIAALFIVSLNTGAYMTEIVRGGIF 419 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ +GQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++F Sbjct: 420 AVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADLF 479 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 +Q + + +YL++T Sbjct: 480 FQGNSASGANFQFFQTFTIVGIIYLVMT 507 >gi|157692904|ref|YP_001487366.1| ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032] gi|157681662|gb|ABV62806.1| ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus SAFR-032] Length = 230 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 124/213 (58%), Gaps = 8/213 (3%) Query: 11 DSFPQL--LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 D PQ+ + + VTL I +S + I+G + + +I +I L FY IFRGT Sbjct: 18 DVIPQMPFILEGLKVTLSIVVVSLFLGFILGILLTLCKISVFKPLIWL-ADFYTSIFRGT 76 Query: 69 PLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PL++QL +I++GLP + G D + A + + TLN +AY+SEIIR+ I +I KGQ +A+ A Sbjct: 77 PLVLQLLIIYFGLPQLLGFQIDQYWAAVAAFTLNSAAYVSEIIRAGINAIDKGQKEAAVA 136 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY- 186 +G+ + ++ ++LPQ + L +E I++ K +++ + I + ++ + A + + TY Sbjct: 137 LGIPYAKMMKDLLLPQAFKNISPALVNETITLTKESAIVTVIGLGDVMRRAYQAGAVTYN 196 Query: 187 --QPLIIYCELAFV-YLILTSFCYIIQIKIESS 216 +PLI + +V L+LT ++ K++S+ Sbjct: 197 YLEPLIFAGLIYYVIVLVLTFVGKSVERKLKSN 229 >gi|330826100|ref|YP_004389403.1| polar amino acid ABC transporter inner membrane subunit [Alicycliphilus denitrificans K601] gi|329311472|gb|AEB85887.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans K601] Length = 221 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/191 (34%), Positives = 113/191 (59%), Gaps = 2/191 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL A VVT+ + +SF++S IG +A+ ++ +S+ + + RG P++V Sbjct: 12 LPILLQGA-VVTVQVTVLSFLLSSAIGLVLALGKLS-PVRAVSVCASTVINVIRGLPIIV 69 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I++ LP IGI +F A +I L + +SAY +E R+ I ++ GQ +A+ A+G+ Sbjct: 70 QLFYIYFVLPDIGIQLSAFQAGVIGLGIAYSAYQAENFRAGIEAVDPGQREAALAMGMRP 129 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +R +ILPQ + P + + +LK +S+ STIT+ E+ + Q I S+T+Q + +Y Sbjct: 130 ALLMRRVILPQAFRIALPPYGNTLVMMLKDSSLISTITVAEMTRAGQLIASSTFQNMTVY 189 Query: 193 CELAFVYLILT 203 +A +YL ++ Sbjct: 190 TLVALLYLAMS 200 >gi|332077738|gb|EGI88199.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA41301] Length = 521 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 59/168 (35%), Positives = 103/168 (61%), Gaps = 3/168 (1%) Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R I++ Sbjct: 343 LNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILA 402 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ Sbjct: 403 VDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYF 462 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQHTYS 223 + + + TYQ + +A +Y +LT + I++ IE + TY+ Sbjct: 463 SGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRF-IERRMDMDTYT 509 >gi|227524319|ref|ZP_03954368.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] gi|227088550|gb|EEI23862.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] Length = 214 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/162 (34%), Positives = 97/162 (59%), Gaps = 5/162 (3%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +++ Y W+ RGTPLL+QL +FYGLP IGI+F+ + A + + LN++AY +EI R S Sbjct: 51 LLNLYDWLMRGTPLLLQLIFVFYGLPVIGIIFERYDAALFAFILNYTAYFAEIFRGGFQS 110 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ++++ + L+ QTIR II+PQ + +E I+++K +S+ I + ++ + Sbjct: 111 VPRGQFESACVLRLSYGQTIRKIIIPQVFKIVLPSIGNEVINLVKDSSLVYVIGLGDLLR 170 Query: 177 TAQRIVS--TTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 + T PL++ + +YL LT+ C I+ IE Sbjct: 171 AGNVATARDVTLLPLVL---VGIIYLALTAICTIVLKVIEKR 209 >gi|190895057|ref|YP_001985350.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700718|gb|ACE94800.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|327194398|gb|EGE61258.1| putative amino acid ABC transporter permease [Rhizobium etli CNPAF512] Length = 222 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 112/200 (56%), Gaps = 4/200 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+II+ +P ++ A VT+ I + + +IGF +AV R + +I + V + R Sbjct: 6 NVIIEQWPAIVSGA-GVTIMIWILGTTAAAVIGFLVAVARQY-GGVLIDKALGGVVAVLR 63 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTP L+Q+F+++YG P IG+ D A +I +++ +AY SEI RS ++PKG +A Sbjct: 64 GTPFLIQIFLVYYGGPFIGLDLDPVPAGLIGISIYGAAYFSEIFRSGFQAVPKGHIEAGE 123 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL-KSTSVASTITIPEIFQTAQRIVSTT 185 +GLTR+Q + I+LP+ +T +P S + IL K T+V S IT+PE+ T I S Sbjct: 124 CVGLTRRQIVWRILLPE-MTMLVLPPSVNMVVILMKETAVLSIITVPELTATLSAIGSQQ 182 Query: 186 YQPLIIYCELAFVYLILTSF 205 Y + LA Y +L Sbjct: 183 YAFVEALSVLALFYWVLVEL 202 >gi|317055330|ref|YP_004103797.1| polar amino acid ABC transporter inner membrane subunit [Ruminococcus albus 7] gi|315447599|gb|ADU21163.1| polar amino acid ABC transporter, inner membrane subunit [Ruminococcus albus 7] Length = 229 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 122/223 (54%), Gaps = 15/223 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHFYV 62 N I + L +VVTL I + ++ L++GF +A+IR + T I + Y+ Sbjct: 10 NFIEGDRWKYLTDGLVVTLEITGAAVLLGLLLGFIVAIIRCTYLKTGKMKIADALCRLYL 69 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSF-----VAIIISLTLNFSAYISEIIRSSIISI 117 + RGTP++VQL +I++ +VF S + II+ +N AY++EI+R I+SI Sbjct: 70 TVIRGTPMMVQLLIIYF------VVFASVNVSKTLVAIIAFGINSGAYVAEIVRGGIMSI 123 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQ +A ++GL +QT+ II+PQ + T L++E I +LK TSVA I I ++ + Sbjct: 124 DNGQMEAGRSLGLNYRQTMTSIIMPQALKTVLPALANECIVLLKETSVAGYIGIYDLTKG 183 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I + TY P + +A +YL++ F + K+E ++ + Sbjct: 184 GDEIRAQTYSPFLPLIAVAVIYLVMVMFLTFLVGKLERRLSAN 226 >gi|295400876|ref|ZP_06810852.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] gi|312111274|ref|YP_003989590.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. Y4.1MC1] gi|294977139|gb|EFG52741.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] gi|311216375|gb|ADP74979.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y4.1MC1] Length = 217 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 91/143 (63%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV R PL++ +FV F GLP IGI FD F A + LT+ +A+I+E+IRS I+++PKG Sbjct: 57 YVEFIRNIPLVLIVFVFFVGLPAIGIRFDPFTAGTLGLTVYTAAFIAEVIRSGILAVPKG 116 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ + GLT QT+R+IILPQ I PL ++FI+++K++SV I ++ Sbjct: 117 QTEAARSSGLTYLQTMRYIILPQAIKIVIPPLGNQFINLVKNSSVLGVIAGLDLMYFGDL 176 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I S T+ +Y +A YL+LT Sbjct: 177 ISSETFVTFDVYIFVALFYLVLT 199 >gi|197118314|ref|YP_002138741.1| amino acid ABC transporter membrane protein [Geobacter bemidjiensis Bem] gi|197087674|gb|ACH38945.1| amino acid ABC transporter, membrane protein [Geobacter bemidjiensis Bem] Length = 272 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 109/186 (58%), Gaps = 2/186 (1%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I+VT + + +++++ G F + RI + ++ YV I RG PLLVQ+F I+Y Sbjct: 73 GILVTFQVTLGAILLAIVFGLFTGLGRIS-KNRFLNGAASLYVEIIRGIPLLVQIFYIYY 131 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 L + ++ II++ + + AY+ E++R+ I SI KGQ +A+ ++G+ +QT+ H+ Sbjct: 132 ALGRF-VQVPPILSAIIAMAVCYGAYMGEVVRAGIESIHKGQREAALSLGMNGRQTMIHV 190 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + P+ +EFI++LK +S+ S I + ++ + + S ++ Y +A +Y Sbjct: 191 ILPQAVKVILPPVGNEFIALLKDSSLVSIIAVADLLRRGREFASESFTYFETYTVIALIY 250 Query: 200 LILTSF 205 LI+T F Sbjct: 251 LIITLF 256 >gi|92114719|ref|YP_574647.1| amino acid ABC transporter permease [Chromohalobacter salexigens DSM 3043] gi|91797809|gb|ABE59948.1| amino acid ABC transporter membrane protein, PAAT family [Chromohalobacter salexigens DSM 3043] Length = 243 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 120/200 (60%), Gaps = 4/200 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL +A V +L++ +A++R+ + + +L M F + FRGTPLLVQLF+ +YGLP Sbjct: 41 LTLEMAAAGMVAALVLACLLAIVRVQRTPGLNALAMLF-ISFFRGTPLLVQLFLFYYGLP 99 Query: 83 HIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + + + A I+ LTL+FSAY++E IR++I+ + + Q +A+ +IG+T+ Q +R I Sbjct: 100 QLLTFLVAINGITATILGLTLHFSAYMAESIRAAIVGVDRSQTEAALSIGMTQGQLMRRI 159 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + L + FI ++K+TS+A T+ + E+ Q+ + ++ + +A +Y Sbjct: 160 VLPQATRVATPTLMNYFIDMIKATSLAFTLGVTELMGATQKEAAGSFLYFEAFLMVAVIY 219 Query: 200 LILTSFCYIIQIKIESSVTQ 219 ++ +Q ++E + + Sbjct: 220 WVVVELLSWLQRRMEKRLNR 239 >gi|258615113|ref|ZP_05712883.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium DO] gi|289565909|ref|ZP_06446349.1| amino acid ABC transporter [Enterococcus faecium D344SRF] gi|293556866|ref|ZP_06675427.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E1039] gi|293563614|ref|ZP_06678058.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E1162] gi|294614606|ref|ZP_06694510.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E1636] gi|294621215|ref|ZP_06700400.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium U0317] gi|314938843|ref|ZP_07846114.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|314943648|ref|ZP_07850402.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|314949084|ref|ZP_07852444.1| ABC transporter, permease protein [Enterococcus faecium TX0082] gi|314952177|ref|ZP_07855195.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|314991849|ref|ZP_07857306.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|314996560|ref|ZP_07861597.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|289162282|gb|EFD10142.1| amino acid ABC transporter [Enterococcus faecium D344SRF] gi|291592508|gb|EFF24113.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E1636] gi|291599211|gb|EFF30243.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium U0317] gi|291600950|gb|EFF31241.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E1039] gi|291604414|gb|EFF33904.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E1162] gi|313589301|gb|EFR68146.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|313593554|gb|EFR72399.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|313595709|gb|EFR74554.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|313597685|gb|EFR76530.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|313641854|gb|EFS06434.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|313644500|gb|EFS09080.1| ABC transporter, permease protein [Enterococcus faecium TX0082] Length = 530 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 108/208 (51%), Gaps = 10/208 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISL 56 F I + + +TL IA I V+ +G I V R F I + Sbjct: 290 FTTIWKQYGNMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRSVPESGNALTRFFQKIGNA 349 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 ++ YV +FRGTP++VQ VIFYGL GI + +A + ++LN AY++EI+R I Sbjct: 350 LLSIYVEVFRGTPMMVQAMVIFYGLALAFGISLNRTIAALFIVSLNTGAYMTEIVRGGIF 409 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ +GQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++F Sbjct: 410 AVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADLF 469 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 +Q + + +YL++T Sbjct: 470 FQGNSASGANFQFFQTFTIVGIIYLVMT 497 >gi|257056915|ref|YP_003134747.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] gi|256586787|gb|ACU97920.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] Length = 219 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 104/187 (55%), Gaps = 2/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++W + + P+LL + TL + ++ +G A+IR +++ + Sbjct: 1 MNWDW-DYTFEILPELLEHFVRYTLVATVLGITVAAALGLVFAIIR-RSRVPVLAQVTTA 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 ++ R TPLL+QLF +FY LP +GI VA ++ L ++++ Y +++ R+ I ++PKG Sbjct: 59 FIEFVRSTPLLIQLFFLFYALPGMGITLSPMVAGVLGLGVHYACYCADVYRAGIEAVPKG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+AS A+ L T R ++LPQ + L + I++ K T + IT+PE+ +TA+ Sbjct: 119 QWEASLALQLPAHITWRRVVLPQAVRNVLPALGNYAIAMFKETPFLALITVPELLRTART 178 Query: 181 IVSTTYQ 187 I TY+ Sbjct: 179 IGGDTYE 185 >gi|78358111|ref|YP_389560.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220516|gb|ABB39865.1| amino acid ABC transporter membrane protein 1, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 309 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 66/212 (31%), Positives = 129/212 (60%), Gaps = 6/212 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF-YVWIFRGTPLLVQLF 75 L ++VT ++ +S V++ +IG ++R+ S +++ + Y+ R TPLL+QLF Sbjct: 99 LLQGLLVTFKVSAVSLVLAAVIGLAAVLLRL--SRSVVGRALAVCYLETVRNTPLLIQLF 156 Query: 76 VIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 V+++ + P G+ D F + +++L+L AYISEIIR+ I ++P GQW+A+ ++GLTR Sbjct: 157 VMYFVVAPLTGM--DRFFSAVLALSLFEGAYISEIIRAGIQAVPAGQWEAARSLGLTRAA 214 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 T R ++LPQ + PL+ + ++++K +++ STI I ++ AQ I++ T+ I+ Sbjct: 215 TYRKVVLPQALGHVLPPLTGQMVTLVKDSALVSTIAIYDLTMQAQAIIAETFLVFEIWFM 274 Query: 195 LAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 +A +YL++T ++ ++E + + + K Sbjct: 275 VAAMYLVVTLSLSLLAQRLECRLRTGSKACRK 306 >gi|254500818|ref|ZP_05112969.1| ABC transporter, permease protein, putative [Labrenzia alexandrii DFL-11] gi|222436889|gb|EEE43568.1| ABC transporter, permease protein, putative [Labrenzia alexandrii DFL-11] Length = 237 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 120/208 (57%), Gaps = 13/208 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + +++T+ +A + I LI+GF IA+ + S+ + L + Y IFRG P L+ LF+++ Sbjct: 21 SGVLITVSLALATLPIGLILGFLIALAKKS-SEPSLKLAANIYTTIFRGLPELLTLFLVY 79 Query: 79 YG----------LPHIGIVF--DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 +G L I F +SFVA +++L+L FS+Y SE S+ IP+GQ++ Y Sbjct: 80 FGVQIAIQEFIKLLGYDIYFEVNSFVAGMVALSLVFSSYASEAFLSAFNGIPQGQYEGGY 139 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+GL+R +T+R IILPQ I + L + ++ +LK TS+ S I + ++ + A T Sbjct: 140 ALGLSRYKTMRFIILPQLIRLALPALGNLWLILLKETSLVSVIGLADLVREAGIAARVTK 199 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIE 214 +P + + + +YL+LT + ++IE Sbjct: 200 EPFLFFGLVLVIYLLLTMISSVGLLRIE 227 >gi|319779070|ref|YP_004129983.1| Histidine ABC transporter, permease protein HisM [Taylorella equigenitalis MCE9] gi|317109094|gb|ADU91840.1| Histidine ABC transporter, permease protein HisM [Taylorella equigenitalis MCE9] Length = 231 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 115/205 (56%), Gaps = 15/205 (7%) Query: 22 VVTLPIACISFVISLIIGFFIAVIR--IFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + LP+ ++S+IIG I++ + TI + ++ YV+ F G+PLLVQL++ ++ Sbjct: 15 ITALPMTLFLSLVSVIIGICISIPLSVMLQRKTIFTPLIKAYVFFFTGSPLLVQLYIFYF 74 Query: 80 GLPHIGIV------------FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 G+P IG + D + I +L LN AY ++I SI ++ + + +A+YA Sbjct: 75 GIPSIGFIQDLMQQPGFEFLKDGKIYIFAALGLNTGAYTTQIFSGSIQNMDRKELEAAYA 134 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G+ RK T+R +ILP ++ + S+E + + +TS+AST+TI E+ A ST Y+ Sbjct: 135 YGMDRKLTMRRVILPSSLRRALPAYSNEVLMTIHATSLASTVTINEVTNAASLFNSTFYE 194 Query: 188 PLIIYCELAFVYLILT-SFCYIIQI 211 P I Y +YL LT SF Y+ ++ Sbjct: 195 PFIAYTAAGIIYLCLTFSFIYLYKL 219 >gi|33599679|ref|NP_887239.1| putative permease component of ABC transporter [Bordetella bronchiseptica RB50] gi|33567276|emb|CAE31189.1| putative permease component of ABC transporter [Bordetella bronchiseptica RB50] Length = 216 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 63/189 (33%), Positives = 118/189 (62%), Gaps = 1/189 (0%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 S V+ +G +A+ R+ + + +YV IFRGTPLL+QL +I++GLPH GI + Sbjct: 26 SAVLGTALGLVLALFRLS-PVAPLRWLAFWYVSIFRGTPLLLQLLLIYFGLPHYGIELEP 84 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 I++L+L +AY+SE RS I+ + +GQ +A+ ++G+ +++ IILPQ I +A Sbjct: 85 VPTAILALSLCSAAYLSENFRSGILGVDRGQIEAAQSLGMGAARSLFRIILPQAIRIAAP 144 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 + + +I+++K TS+ASTIT+ E+ + A+++ S T++ + ++ +Y ++ IQ Sbjct: 145 TMGTRYIALMKDTSLASTITVVELTKMAEQVGSNTFRYMEMFIIAGALYWVINQMLTFIQ 204 Query: 211 IKIESSVTQ 219 + +ES + + Sbjct: 205 VWVESKLGK 213 >gi|293567831|ref|ZP_06679172.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E1071] gi|291589416|gb|EFF21223.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E1071] Length = 530 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 108/208 (51%), Gaps = 10/208 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISL 56 F I + + +TL IA I V+ +G I V R F I + Sbjct: 290 FTTIWKQYGNMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRSVPESGNALTRFFQKIGNA 349 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 ++ YV +FRGTP++VQ VIFYGL GI + +A + ++LN AY++EI+R I Sbjct: 350 LLSIYVEVFRGTPMMVQAMVIFYGLALAFGISLNRTIAALFIVSLNTGAYMTEIVRGGIF 409 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ +GQ++A+ AIG+T QT+R +++PQ + +EF+ +K T+V S I + ++F Sbjct: 410 AVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADLF 469 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 +Q + + +YL++T Sbjct: 470 FQGNSASGANFQFFQTFTIVGIIYLVMT 497 >gi|228477049|ref|ZP_04061687.1| glutamine ABC transporter permease protein [Streptococcus salivarius SK126] gi|228251068|gb|EEK10239.1| glutamine ABC transporter permease protein [Streptococcus salivarius SK126] Length = 732 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 116/204 (56%), Gaps = 9/204 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 LI +++ QLL + +SF I++IIG ++ + + T+ +I +V + RG Sbjct: 517 LIKNNYKQLLQGLGITLGLTL-LSFAIAMIIGVIFGMMAVAPNKTL-RVISQVFVDVVRG 574 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ I++G+P++ + FVA I+L+LN AYI+EI+R I ++P G Sbjct: 575 IPLMIVAAFIYWGIPNLIENITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPIG 634 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G+ T+R +ILPQ + ++F+ LK T++ S I + E+FQT + Sbjct: 635 QMEASRSLGVPYNTTMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKI 694 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 I++ YQ +Y LA +YL++ + Sbjct: 695 IIARNYQSFRMYAILAILYLVIIT 718 >gi|300702420|ref|YP_003744020.1| amino-acid ABC transporter [Ralstonia solanacearum CFBP2957] gi|299070081|emb|CBJ41368.1| putative amino-acid ABC transporter [Ralstonia solanacearum CFBP2957] Length = 223 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/184 (35%), Positives = 108/184 (58%), Gaps = 2/184 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL A VVT+ + +SF++S +IG +A++R+ + S I RG P++V Sbjct: 14 LPILLQGA-VVTVEVTVLSFLLSSVIGLALALMRLSPVKAV-SAAGATVANIIRGLPIIV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I++ LP IGI +F A +I L + +SAY +E R+ I ++ GQ +A+ A+G+ Sbjct: 72 QLFYIYFVLPDIGIQLTAFQAGVIGLGIAYSAYQAENFRAGIEAVDPGQREAAQAMGMRG 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +R +ILPQ + P + + +LK +S+ STIT+ E+ + Q I S+T+Q + +Y Sbjct: 132 ALIMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAGQLIASSTFQNMTVY 191 Query: 193 CELA 196 +A Sbjct: 192 TLVA 195 >gi|296160737|ref|ZP_06843551.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295889040|gb|EFG68844.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 220 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 109/202 (53%), Gaps = 11/202 (5%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q + A + TL VI ++IGF IAV+++F + I+ Y+ +FRGTP LVQL Sbjct: 14 QPIAAGLATTLGTWAAGVVIGMLIGFLIAVLQLFCGRWVRG-ILRVYIELFRGTPFLVQL 72 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F+++YG P G+ + A ++ L L SAY +E RS S+P G +A+ +GLTR Q Sbjct: 73 FLLYYGGPSFGLTLEPMTAGVLGLGLYGSAYFAEAFRSGFQSVPPGHLEAASCLGLTRWQ 132 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + I +PQ + L++ I + K T+V S +T+PE+ I S T+ Sbjct: 133 AVLRIQVPQMLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATF-------- 184 Query: 195 LAFVY-LILTSFCYIIQIKIES 215 AFV L++ CY+ +++ S Sbjct: 185 -AFVETLLVLCVCYLALVELTS 205 >gi|167842072|ref|ZP_02468756.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia thailandensis MSMB43] Length = 297 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 111/204 (54%), Gaps = 14/204 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY---- 79 T+ + ++ + +++G AV+R+ S+ ++ I Y+W+FRGTP+++QL + F Sbjct: 81 TIVMTVLAMTLGIVLGVVTAVMRLS-SNPVLGAIAQGYIWLFRGTPVILQLLLWFNLALV 139 Query: 80 ----GLPHIG-----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 G+P I V F+A ++ L +N AY SE++R+ ++S+ GQ++A+ +IG+ Sbjct: 140 FPTLGIPGIAEFRTVDVMTPFLAAVLGLGINQGAYTSEVVRAGLLSVDTGQYEAAKSIGM 199 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 R Q +R IILPQ + P+ +E I ++K TS+AS + E+ AQ I + + Sbjct: 200 ARLQALRRIILPQAMRMIVPPIGNELIGMVKLTSLASVVQYAEMLHNAQNIYYANARVIE 259 Query: 191 IYCELAFVYLILTSFCYIIQIKIE 214 + YL + + Q ++E Sbjct: 260 LLIVAGIWYLAVVTVLSFAQARVE 283 >gi|299541711|ref|ZP_07052041.1| amino-acid ABC transporter permease protein [Lysinibacillus fusiformis ZC1] gi|298725806|gb|EFI66440.1| amino-acid ABC transporter permease protein [Lysinibacillus fusiformis ZC1] Length = 219 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 121/222 (54%), Gaps = 17/222 (7%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTIISLIM 58 F I+ S P +L I VTL IA + +I I+G +A+ +I +F+D Sbjct: 5 FTAIVPSIPYIL-KGIGVTLQIAIGASIIGFIVGILLALCKIGKVNFLRWFAD------- 56 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 FY IFRGTPL++QL +I+Y +P + I D II+ LN AYISEIIR+ I ++ Sbjct: 57 -FYTSIFRGTPLVLQLLIIYYAVPQLLDIQIDPIPTAIIAFGLNSGAYISEIIRAGINAV 115 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ +A+ A+G+ + ++ II+PQ + L +EFI++ K T+V + I+ +I + Sbjct: 116 DKGQMEAAQALGIPYAKMMKDIIIPQAVKNILPSLVNEFITLNKETAVVTVISALDIMRR 175 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 A + +TY+ L +Y I+T + +IE + + Sbjct: 176 AYIVGGSTYRYLEPLLFAGVIYYIMTLVLTFLGKRIEKGMRK 217 >gi|223983007|ref|ZP_03633216.1| hypothetical protein HOLDEFILI_00495 [Holdemania filiformis DSM 12042] gi|223965053|gb|EEF69356.1| hypothetical protein HOLDEFILI_00495 [Holdemania filiformis DSM 12042] Length = 519 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 111/185 (60%), Gaps = 9/185 (4%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL +A I+ I G IA+I++ + ++ I YV + RGTP+LVQL++ + LP Sbjct: 321 TLKLAAITVFFGTIFGALIAIIKLS-KNPLLKFITAVYVEVLRGTPILVQLYIFRFFLPM 379 Query: 84 I--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + + ++I+L N SAY++EIIRS I ++ KGQ +A+ ++G++ + + IIL Sbjct: 380 AFPWLNLSKYACVVIALVFNSSAYVAEIIRSGIQAVDKGQSEAAKSLGMSNRHMMMKIIL 439 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY---QPLIIYCELAFV 198 PQ + L +EF++++K TS+AST I E+ T ++ST + QPLII +A + Sbjct: 440 PQAVKNILPALGNEFVTMIKETSLASTFYIGELMYTRTLLMSTKFYAWQPLII---IAAI 496 Query: 199 YLILT 203 Y ++T Sbjct: 497 YFVVT 501 >gi|213418515|ref|ZP_03351581.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 217 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 121/218 (55%), Gaps = 5/218 (2%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++W + I + P LL A +TL I+ + L+IG R F + I ++ Sbjct: 1 FDW-SAIWPAIPLLLEGA-KMTLWISVLGLAGGLVIGLAAGFARTF-GGWFANHIALVFI 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 I RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI KG Sbjct: 58 EIIRGTPIVVQVMFIYFALPMAFNDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHKG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A A+GL+R++TIRH+ILP + PL +++I +K TS+ I + E+ + Q Sbjct: 118 FREAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQE 177 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 I++ ++ L I+ +A YLI+T I ++E + Sbjct: 178 IIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMK 215 >gi|254437975|ref|ZP_05051469.1| ABC transporter, permease protein, putative [Octadecabacter antarcticus 307] gi|198253421|gb|EDY77735.1| ABC transporter, permease protein, putative [Octadecabacter antarcticus 307] Length = 222 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 94/144 (65%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 ++W RGTP L+Q+F+I++GLP +G+ + +VA I++L L+ AY++EI+RS +IP G Sbjct: 61 FIWFIRGTPTLIQIFMIYFGLPQLGLGLNPYVAGILALGLSGGAYVAEILRSGFNAIPNG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A ++GL + ++LPQ + L++E ++ LK+TS+ S ITI EI A++ Sbjct: 121 QFEAGRSLGLPTWAILWFVVLPQLLRIVVPALTNEAMNTLKNTSLLSAITIVEITLYAKQ 180 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +++T++P Y A YLIL Sbjct: 181 QIASTFRPFDYYILAAIFYLILAE 204 >gi|313622696|gb|EFR93054.1| arginine transport system permease protein ArtQ [Listeria innocua FSL J1-023] Length = 165 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 94/143 (65%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ RGTPLL+Q+F++F+G IG+ +FV+ I+L+LN +AY++EIIR+ I ++ KG Sbjct: 5 YIEFVRGTPLLIQIFIVFFGTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKG 64 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++G+T+ ++R+IILPQ + L +EF++++K +S+ S I + E+ Sbjct: 65 QMEAARSLGMTQGASMRYIILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGV 124 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + +++P I + +Y +LT Sbjct: 125 VQGASFKPFIPLIITSLIYFVLT 147 >gi|312863094|ref|ZP_07723332.1| lysine-arginine-ornithine-binding periplasmic protein [Streptococcus vestibularis F0396] gi|311100630|gb|EFQ58835.1| lysine-arginine-ornithine-binding periplasmic protein [Streptococcus vestibularis F0396] Length = 732 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 116/204 (56%), Gaps = 9/204 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 LI +++ QLL + +SF I++IIG ++ + + T+ +I +V + RG Sbjct: 517 LIKNNYKQLLQGLGITLGLTL-LSFAIAMIIGVLFGMMAVAPNQTL-RVISQVFVDVVRG 574 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ I++G+P++ + FVA I+L+LN AYI+EI+R I ++P G Sbjct: 575 IPLMIVAAFIYWGIPNLIENITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPIG 634 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G+ T+R +ILPQ + ++F+ LK T++ S I + E+FQT + Sbjct: 635 QMEASRSLGVPYNTTMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKI 694 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 I++ YQ +Y LA +YL++ + Sbjct: 695 IIARNYQSFRMYAILAILYLVIIT 718 >gi|327382993|gb|AEA54469.1| Arginine/histidine ABC superfamily ATP binding cassette transporter permease [Lactobacillus casei LC2W] gi|327386181|gb|AEA57655.1| Arginine/histidine ABC superfamily ATP binding cassette transporter permease [Lactobacillus casei BD-II] Length = 220 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 115/202 (56%), Gaps = 8/202 (3%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W NL + L + VTL ++ +S S I+G + + R + S I+ F + Sbjct: 8 YSWINL------RYLLQGLGVTLEVSIVSIFFSFILGVILGLAR-YVKIKYFSAIVGFVI 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + R PLL+ LF ++ LP IGI + A II++++ SA ++EI+RS I ++P+GQ Sbjct: 61 DVIRNLPLLLILFFTYFALPDIGIRLNVVAAAIIAMSIFESAMLAEIVRSGINAVPRGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ + GLT Q +R+II+PQ + P+ S+FIS++K TS+A+ I +PE AQ I Sbjct: 121 EAARSNGLTFYQAMRYIIMPQALKKMIPPIVSQFISLVKDTSLATIILLPEATYHAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLILT 203 +I ++ LA +Y ++ Sbjct: 181 GQNINYMIPMFVALAVMYFVVN 202 >gi|226306802|ref|YP_002766762.1| amino acid ABC transporter permease protein [Rhodococcus erythropolis PR4] gi|226185919|dbj|BAH34023.1| putative amino acid ABC transporter permease protein [Rhodococcus erythropolis PR4] Length = 316 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 124/223 (55%), Gaps = 24/223 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + A T+ + ++ VI++++G +AV+R+ + ++ Y+WIFRGTP+ V Sbjct: 56 FDKRISAGAWTTIQLTVLAMVIAIVLGVILAVMRLS-PNPVLRAAAWGYLWIFRGTPVYV 114 Query: 73 QLFVIFYGL-PHI------GIVF-------------DSFVAIIISLTLNFSAYISEIIRS 112 QL +F+GL P I GI F +F+ +I L LN +AY++EI+R+ Sbjct: 115 QL--VFWGLFPSIYKSIDLGIPFVHQFAHINLQDLQAAFLFAVIGLALNEAAYMAEIVRA 172 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + S+ +GQ +AS A+G+T QT+R +LPQ + P +E IS+LK+TS+ + + Sbjct: 173 GVSSVNEGQTEASVALGMTWSQTMRRTVLPQAMRVIIPPTGNEVISMLKTTSLVTAVPYS 232 Query: 173 -EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 E++ A+ I ++P+ + A YL +TS I Q +E Sbjct: 233 FELYGRARDISGANFEPIPLLMVAATWYLAITSLLMIGQYYVE 275 >gi|323698839|ref|ZP_08110751.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323458771|gb|EGB14636.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 227 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/141 (42%), Positives = 87/141 (61%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV IFRGTPLLVQLF++FYG P G+ + I+ L AY +EI R+ SIP Sbjct: 55 RLYVNIFRGTPLLVQLFLLFYGGPLFGLRLSAIATGILGLAAYGGAYFAEIYRAGFQSIP 114 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +A+ +GL+R Q +RHI LPQ +T PL+++ I I+K +++ S IT+PE+ A Sbjct: 115 PGQIEAARDLGLSRWQIVRHIQLPQMLTLILPPLTNQAIIIVKESAILSIITVPELTTAA 174 Query: 179 QRIVSTTYQPLIIYCELAFVY 199 ++ +TT+ + Y LA Y Sbjct: 175 VKVSTTTFSIVEPYLLLAAAY 195 >gi|229823498|ref|ZP_04449567.1| hypothetical protein GCWU000282_00796 [Catonella morbi ATCC 51271] gi|229786942|gb|EEP23056.1| hypothetical protein GCWU000282_00796 [Catonella morbi ATCC 51271] Length = 470 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 129/213 (60%), Gaps = 3/213 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 +F + ++ P LL + + TL IA IS ++LI+G + ++R+ ++ +S I YV + Sbjct: 259 FFGQLAENGPALL-SGLGTTLWIALISVALALILGIILGLLRVQ-ANPWLSGIAAVYVDL 316 Query: 65 FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RG PL+V F I++G+P + G+ F S VA I +L+LN +AY++EI+R I +I KGQ + Sbjct: 317 MRGVPLIVLSFFIYFGIPQMTGVRFSSAVAGITTLSLNAAAYVAEIVRGGIQAIDKGQME 376 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AS ++GL+ +T++ IILPQ I ++F+ LK TS+ S I + E+ QT I++ Sbjct: 377 ASRSLGLSYGKTMQKIILPQAIKLMIPSFINQFVITLKDTSILSVIGLVELTQTGSVIIA 436 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 TYQ ++ + +YLI+ + + ++E Sbjct: 437 RTYQSGSMWLIVGLMYLIVITALTRLSKRLEGG 469 >gi|271501471|ref|YP_003334497.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270345026|gb|ACZ77791.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 238 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/196 (34%), Positives = 114/196 (58%), Gaps = 10/196 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +A+ VTL + SFV+ + + +R+ + +S Y+ IFRGTPLL+QLF+ Sbjct: 14 LLSALPVTLGLFFSSFVVGAALSVLLVAMRVS-AIWPLSGFARLYMLIFRGTPLLIQLFL 72 Query: 77 IFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 ++YGL +V DS F +++L L + Y +EI+R +++S+P GQ +A A Sbjct: 73 VYYGLGQFSVVRDSLFWPVLRDPFSCAVMALALCTAGYTAEILRGALLSVPAGQIEAGLA 132 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++R +R II P + + S+E I ++KST++AS +T+ +I AQ+I+ TY+ Sbjct: 133 CGMSRWLLLRRIIAPVALRHALPAWSTEAILLIKSTALASLVTVWDITGVAQQIIQRTYR 192 Query: 188 PLIIYCELAFVYLILT 203 L ++ A +YL+L Sbjct: 193 TLEVFVCAALIYLLLN 208 >gi|289422748|ref|ZP_06424588.1| amino acid ABC transporter, permease protein [Peptostreptococcus anaerobius 653-L] gi|289156927|gb|EFD05552.1| amino acid ABC transporter, permease protein [Peptostreptococcus anaerobius 653-L] Length = 221 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 62/180 (34%), Positives = 108/180 (60%), Gaps = 10/180 (5%) Query: 34 ISLIIGFF---IAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF-- 88 ++L +GFF IA I + + S+I Y+ + R TPL++QL +I++GLP +G+ F Sbjct: 24 LALFLGFFVGLIACIGKISNSKVASIIASIYIEVIRDTPLMIQLAIIYFGLPSLGVNFPS 83 Query: 89 -----DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + F A + +LTLN AY++EI+RS I ++ KGQ +AS ++GL Q +R++I+PQ Sbjct: 84 LFGLPEEFTAGVFALTLNSGAYVAEIMRSGIQAVNKGQMEASRSLGLNYWQAMRYVIVPQ 143 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + L++EFIS++K +++ S + I ++ A + ++T Y A VY ++T Sbjct: 144 AVKNILPALANEFISLIKESAIVSVVGITDLTFFASSVKNSTGDFFGPYIFAAVVYFVIT 203 >gi|239627922|ref|ZP_04670953.1| polar amino acid ABC transporter [Clostridiales bacterium 1_7_47_FAA] gi|239518068|gb|EEQ57934.1| polar amino acid ABC transporter [Clostridiales bacterium 1_7_47FAA] Length = 230 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 71/221 (32%), Positives = 123/221 (55%), Gaps = 7/221 (3%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHF 60 + N + ++ + L + TL I + ++ +++GF + +IR + T +++ I Sbjct: 10 YLNFVSENRWKYLTDGLKTTLIITLFACLMGIVLGFIVGMIRSTYEKTHKLKLLNAICKV 69 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + RGTP++VQL +I++ L + D + I++ +N AY++EI RS I+SI G Sbjct: 70 YLTVIRGTPVIVQLLIIYFVLFG-SVRIDKVLVAILAFGINSGAYVAEIFRSGIMSIDAG 128 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A ++G QT+ +II+PQ T L +EFIS+LK TSVA I I ++ + Sbjct: 129 QMEAGRSLGFNYAQTMWYIIMPQAFKTVLPTLCNEFISLLKETSVAGYIAIQDLTKGGDI 188 Query: 181 IVSTTYQPLIIYCELAFVYLILTS-FCYIIQIKIESSVTQH 220 I S TY + +A +YLI+ F +IQI +E + Q+ Sbjct: 189 IRSRTYSAFMPLIAVALIYLIIVMIFTKLIQI-LERRLRQN 228 >gi|120555956|ref|YP_960307.1| polar amino acid ABC transporter, inner membrane subunit [Marinobacter aquaeolei VT8] gi|120325805|gb|ABM20120.1| amino acid ABC transporter membrane protein, PAAT family [Marinobacter aquaeolei VT8] Length = 237 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 110/203 (54%), Gaps = 4/203 (1%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 +++W I+S P L I TL I+ I ++G ++ I + + Y Sbjct: 20 QFDW-QAAINSIP-YLAKGIPYTLMISFGGLAIGFVLGIVFGLLSIN-KNWFLRWPATAY 76 Query: 62 VWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + IFRGTP+LVQ+ IFYGLP +G D A I ++ LN AYISE++R + SI KG Sbjct: 77 IEIFRGTPILVQVLFIFYGLPDLVGGPIDPLTAGIAAIALNSGAYISEVVRGGVQSIDKG 136 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A ++GL+R QT +I+ PQ PL ++ I +K TS+ S I + E+ + Q Sbjct: 137 QTEAGLSLGLSRSQTFWNIVWPQAFRRMIPPLGNQAIVSIKDTSLFSVIGVGELVRQGQV 196 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 ++ T+ +Y +A +YL +T Sbjct: 197 YIANTFTAFEVYFVVAIMYLAIT 219 >gi|320538105|ref|ZP_08038002.1| ABC transporter, permease protein [Treponema phagedenis F0421] gi|320145039|gb|EFW36758.1| ABC transporter, permease protein [Treponema phagedenis F0421] Length = 229 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 109/204 (53%), Gaps = 23/204 (11%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I T+ +A + ++IG + + RI + I YV RGTPLLVQLF+I+Y Sbjct: 16 GIKNTVLLALFTVAFGVLIGIVLVLGRIS-KQKWLRFISTAYVEFIRGTPLLVQLFIIYY 74 Query: 80 GLPHIGIVFDS--------------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 GLP +GI F + F+ +I+L +N AYI EI RS I +I GQ +A+ Sbjct: 75 GLPALGIKFPNNKLLSSIIGMPFSDFIPGVITLAINSGAYICEIFRSGIQAIEIGQTEAA 134 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++GL+ +QT+R II PQ T+ L +EFI+++K +S+ S I I ++ A I T Sbjct: 135 RSLGLSYRQTLRLIIFPQAFKTALPTLGNEFIAVIKESSIVSVIGIADLMYKANVIRGNT 194 Query: 186 YQPLIIYCELAFVYLILTSFCYII 209 + P F L++ + CY + Sbjct: 195 FLP--------FEPLLIAALCYFL 210 >gi|260854102|ref|YP_003227993.1| glutamine high-affinity transport system, membrane component [Escherichia coli O26:H11 str. 11368] gi|260866977|ref|YP_003233379.1| glutamine high-affinity transport system, membrane component [Escherichia coli O111:H- str. 11128] gi|257752751|dbj|BAI24253.1| glutamine high-affinity transport system, membrane component [Escherichia coli O26:H11 str. 11368] gi|257763333|dbj|BAI34828.1| glutamine high-affinity transport system, membrane component [Escherichia coli O111:H- str. 11128] gi|323175570|gb|EFZ61165.1| glutamine transport system permease protein glnP [Escherichia coli 1180] Length = 219 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 124/219 (56%), Gaps = 5/219 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P L+ A +TL I+ + L+IG R F I + + Sbjct: 1 MQFDW-SAIWPAIPLLIEGA-KMTLWISVLGLAGGLVIGLLAGFARTF-GGWIANHVALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R +TIR++ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 Q I++ ++ L I+ +A +YLI+T I ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVLYLIITLVLSFILRRLERRM 216 >gi|302669342|ref|YP_003832492.1| amino acid ABC transporter permease [Butyrivibrio proteoclasticus B316] gi|302397006|gb|ADL35910.1| amino acid ABC transporter permease protein [Butyrivibrio proteoclasticus B316] Length = 228 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 124/212 (58%), Gaps = 12/212 (5%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD----TIISLIMHFYVWIFRGTPL 70 +L + + +TL +A + ++ ++IG +A++++ ++ TI++ I YV + RGTP Sbjct: 18 KLYLSGLGITLEVAFFAGILGILIGTLMALMKLSTTEDGRPTILNYIASVYVDVIRGTPS 77 Query: 71 LVQLFVIFY---GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 ++QL ++++ + GI+ S +S +N AY+SEI+R+ I+++ KGQ +A + Sbjct: 78 VLQLLIMWFIIMASSNNGILVAS-----LSFGINSGAYVSEIVRAGILAVDKGQMEAGRS 132 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL++ T+R+IILPQ I PL +EFI+++K T++ +++ ++ + A +I S TY Sbjct: 133 LGLSKATTMRYIILPQAIKNIIPPLGNEFITLIKETAIVGYVSLTDLTRVANQIASRTYD 192 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + A +Y ++ I K+E + + Sbjct: 193 AFMPLIGAAVIYFVIIKLLSIFLEKLERRMRR 224 >gi|133723150|gb|ABO37821.1| GlnP [Lactococcus garvieae] Length = 237 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/195 (34%), Positives = 113/195 (57%), Gaps = 14/195 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGTPLLVQ 73 L + +T+ +A +SFV+++I+G VI FS + + I YV + R PLLV Sbjct: 30 LGKGLWITIQLALVSFVLAMIVG----VIFGLFSASPSPALRTISRIYVDLNRSIPLLVL 85 Query: 74 LFVIFYGLPHIGIV-------FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 IFYG+P++ + + F A +I+LTLN SAYI+EI+R I ++P GQ +AS Sbjct: 86 TIFIFYGIPNMLQLITGHQSPLNEFTAGVIALTLNESAYIAEIVRGGIAAVPTGQMEASR 145 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+ +T+R +ILPQ + + L ++FI LK T++ S I + E+ Q Q IV+ + Sbjct: 146 SLGIPYVKTMRKVILPQAVKITIPSLINQFIITLKDTTLVSVIGLVELLQAGQIIVARNF 205 Query: 187 QPLIIYCELAFVYLI 201 Q +Y + +Y++ Sbjct: 206 QAFRVYGLIGLIYMV 220 >gi|87122516|ref|ZP_01078395.1| ABC basic amino acid transporter, inner membrane subunit [Marinomonas sp. MED121] gi|86162158|gb|EAQ63444.1| ABC basic amino acid transporter, inner membrane subunit [Marinomonas sp. MED121] Length = 223 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 118/207 (57%), Gaps = 10/207 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 V+L + +S V+ I IA+ RI + +IS + Y++ FRGTPLLVQ+F+++YG Sbjct: 6 VSLQLIFLSVVLGGIFALPIALARIS-KNPLISGLPFAYIFFFRGTPLLVQIFLVYYGAS 64 Query: 83 HIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 +V +SF+ II+ TLN SAY +EI R +I +IP G+ +A +G+T+ Sbjct: 65 QFEVVRESFLWPILREPFWCAIIAFTLNTSAYTAEIFRGAIQAIPVGEVEACKVVGMTKV 124 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q R I+LP+ +E I +LK +++ASTITI ++ A+ I++ TY P+ I+ Sbjct: 125 QMYRRILLPRAFGIVLPAYGNEIILMLKGSALASTITILDLTGMARTIIARTYTPIEIFL 184 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQH 220 +YL+++ I ++E ++ Sbjct: 185 AAGAIYLVISMVVIAIFKQVEKRQNRY 211 >gi|331268245|ref|YP_004394737.1| amino acid ABC transporter permease [Clostridium botulinum BKT015925] gi|329124795|gb|AEB74740.1| amino acid ABC transporter, permease protein [Clostridium botulinum BKT015925] Length = 235 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 117/208 (56%), Gaps = 15/208 (7%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 +D++ +T+ ++ I+ ++S I+G A++++ I+ I ++ I RGTP Sbjct: 11 LDTYLPFFLNGAGITIILSLITVLLSSILGTVFALMKLS-RIKILRAISTIFIEIVRGTP 69 Query: 70 LLVQLFVIFYG-----------LPHIGIVFDSFVA---IIISLTLNFSAYISEIIRSSII 115 LLVQ+++ +YG LP I I+ + F I+I+L LN +AY++EIIR I Sbjct: 70 LLVQVYIFYYGIPEVLENIGVYLPQIDIMGNDFTGLSMIVITLALNSTAYVAEIIRGGIE 129 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SI KGQ +A+ ++GLT+ +R++I+PQ I L +EFI+++K +S+ S + I E+ Sbjct: 130 SINKGQIEAARSLGLTQSMAMRYVIIPQAIKNILPALGNEFITVIKESSIVSVVGIKELM 189 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ T + Y A +Y ILT Sbjct: 190 FNAKTASGATLKVFTPYLAAAAIYFILT 217 >gi|269303067|gb|ACZ33167.1| amino acid ABC transporter, permease protein [Chlamydophila pneumoniae LPCoLN] Length = 217 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 110/192 (57%), Gaps = 2/192 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 +LL TL ++ I + I+G I V ++F + L+ + YV + RGTPL +Q Sbjct: 9 RLLLRGCGYTLCVSGIGILCGSILGLLIGTVTSLYFPSKLTKLLANSYVTVIRGTPLFIQ 68 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 + ++++GLP + I VA II+L++N +AY++E IR I S+ GQW+++ +G + Sbjct: 69 ILIVYFGLPEVLPIEPTPLVAGIIALSMNSAAYLAENIRGGINSLSIGQWESAMVLGYKK 128 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 Q +II PQ L++EF+S++K +S+ + +PE+ + + IVS P+ +Y Sbjct: 129 YQIFIYIIYPQVFKNILPSLTNEFVSLIKESSILMVVGVPELTKVTKDIVSRELNPMEMY 188 Query: 193 CELAFVYLILTS 204 A +Y ++T+ Sbjct: 189 LICAGLYFLMTT 200 >gi|299822124|ref|ZP_07054010.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] gi|299815653|gb|EFI82891.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] Length = 487 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 113/181 (62%), Gaps = 3/181 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 T+ +A + + I+G +A++++ S+T + +Y+ RGTPLLVQ+ ++F+G Sbjct: 291 TILLAIVGVLFGSILGSLLALMKL--SETRWLRWPASWYIEFVRGTPLLVQISIVFFGTQ 348 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 +G+ +F++ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+TR ++R+IILP Sbjct: 349 ILGLNLSAFLSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTRGTSMRYIILP 408 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + L +EF+S++K +S+ S I + E+ + +++P I + +Y +L Sbjct: 409 QAVKNILPALGNEFVSVIKESSIVSVIGVGELMFVTGVVQGASFKPFIPLVITSLIYFVL 468 Query: 203 T 203 T Sbjct: 469 T 469 >gi|111017823|ref|YP_700795.1| ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] gi|110817353|gb|ABG92637.1| ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] Length = 311 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 120/223 (53%), Gaps = 25/223 (11%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P++L +V+T+ + +S + +G +AV+R+ + I++ I Y+W FRGTPLLVQ Sbjct: 70 PEILRG-VVLTIILTIVSMTAGISLGTLLAVMRLS-DNPIVNSISRGYIWFFRGTPLLVQ 127 Query: 74 LF-----VIFYGLPHIGIVFDSFVAIIISLT--------------LNFSAYISEIIRSSI 114 L Y IGI F +I S+ LN +AY++EIIR I Sbjct: 128 LIFWYNIAALYPTISIGIPFGGPEFMIGSVNTLITPLGAALLGLSLNEAAYMAEIIRGGI 187 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+ GQ+DA+ A+G+ + Q +R +ILPQ + P ++ IS+LK T++ S + I ++ Sbjct: 188 GSVDNGQYDAAQALGMNKTQLMRRVILPQAMRVVLPPTGNQVISMLKGTTLVSVLAISDL 247 Query: 175 FQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIES 215 +AQ I S YQ PL+I L YL++T+ Q K+E Sbjct: 248 LYSAQIIYSLNYQTIPLLIVASL--WYLLMTTILSFFQDKLEK 288 >gi|304395807|ref|ZP_07377690.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304357101|gb|EFM21465.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 246 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 122/207 (58%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + D+F +L AA+ VTL + +F+ ++ I +R+ ++S Y+ +F Sbjct: 4 FAFLTDTFLKL-SAALPVTLGLFISAFLCGGVLAVGILALRMS-RWRLLSAFARGYILVF 61 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSIIS 116 RG+PL++QLF+I+YGL G++ S F +++L+L +AY +EI+R ++++ Sbjct: 62 RGSPLMIQLFLIYYGLGQFGVIRHSVFWPFLREPFTCAVLALSLCTAAYTAEILRGALLA 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P GQ +A A G++R +R II P + + S+E I ++KST++AS +T+ ++ Sbjct: 122 VPPGQVEAGMACGMSRGLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTG 181 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 AQ+I+ TY+ + ++ A +YLIL Sbjct: 182 VAQQIIQRTYRTMEVFLCAAAIYLILN 208 >gi|242374107|ref|ZP_04819681.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis M23864:W1] gi|242348232|gb|EES39834.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis M23864:W1] Length = 375 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 63/186 (33%), Positives = 111/186 (59%), Gaps = 4/186 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRI-FFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 I T+ I+ I ++ I+G IA++++ F +S + Y+ RGTP+LVQ+F++F Sbjct: 174 GIKDTILISSIGVILGSILGALIALMKLSKFKP--LSWLASIYIEFLRGTPMLVQVFIVF 231 Query: 79 YGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 +G +G+ + + I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL QT++ Sbjct: 232 FGTTAALGLDVSALICGTIALVINSSAYIAEIIRAGINAVDKGQTEAARSLGLNYSQTMK 291 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 +++PQ I L +EF++++K +S+ STI + EI AQ + ++ P A Sbjct: 292 FVVMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLIAAV 351 Query: 198 VYLILT 203 +Y ILT Sbjct: 352 LYFILT 357 >gi|66048138|ref|YP_237979.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63258845|gb|AAY39941.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] gi|330900968|gb|EGH32387.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] gi|330939296|gb|EGH42691.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] gi|330970704|gb|EGH70770.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] gi|330980615|gb|EGH78718.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 229 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 123/207 (59%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +II P+L A +TL + I+ + LI+ + + R + +L + Y++ F Sbjct: 3 WEVIIKWLPRLAQGA-TLTLELVAIAVIAGLILAIPMGIARASRHWPVRALP-YAYIFFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+++YGL V D F ++++TL+ +AYI+EI+R ++ + Sbjct: 61 RGTPLLVQLFLVYYGLAQFESVRQSALWPYLRDPFWCAVVTMTLHTAAYIAEILRGAMQA 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P G+ +A+ A+G+++ + + +I+LP+ S+E I +LK++++AST+T+ E+ Sbjct: 121 VPPGEVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I++ TY P+ I+ YL++T Sbjct: 181 MARTIIARTYLPVEIFFAAGMFYLVMT 207 >gi|297192145|ref|ZP_06909543.1| polar amino acid ABC transporter [Streptomyces pristinaespiralis ATCC 25486] gi|197720209|gb|EDY64117.1| polar amino acid ABC transporter [Streptomyces pristinaespiralis ATCC 25486] Length = 326 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 116/208 (55%), Gaps = 22/208 (10%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I S VI +++G +AV+R+ + ++S + Y+W FRGTP+LVQ+ + F + Sbjct: 87 TLKITVYSMVIGVVLGAILAVMRLS-PNPVLSSVAWGYIWFFRGTPVLVQILLWF----N 141 Query: 84 IGIVFD-----------------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 + +VF FVA +++L LN +AY++EI R+ I S+ GQ +A++ Sbjct: 142 LSLVFQYLDLGFIYRDEMNQVMTPFVAALLALGLNEAAYMAEICRAGIQSVDSGQTEAAH 201 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G+ +T+R I+LPQ + P +EFI++LK++S+A I E+F + S T Sbjct: 202 ALGMKGGRTMRRIVLPQAMRVIIPPTGNEFINMLKTSSLAFAIGYGELFLRGREFGSRTL 261 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIE 214 + Y ++ YL LT+ I Q +E Sbjct: 262 AIMEGYIVISLWYLALTTVFSIGQYYLE 289 >gi|160900970|ref|YP_001566552.1| polar amino acid ABC transporter inner membrane protein [Delftia acidovorans SPH-1] gi|160366554|gb|ABX38167.1| polar amino acid ABC transporter, inner membrane subunit [Delftia acidovorans SPH-1] Length = 217 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 115/192 (59%), Gaps = 9/192 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L A +VTL + I+ +S+ +G +A++RI +S ++ Y+W+ RGTPL++Q+ Sbjct: 11 LSAGALVTLKLFVITLALSIPLGLSLALMRIS-RFPALSRLVGGYIWLMRGTPLMLQMLF 69 Query: 77 IFYGLPH---IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 I++ LP IG+ F A +++ LN++AY +EI R+ I S+ +GQ++ + +G++ Sbjct: 70 IYFALPFVPVIGVRLPDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEGAKVLGMSYG 129 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY--QPLII 191 QT+R IILPQ P+S+E I+++K TS+ + + ++ + A+ IV + P ++ Sbjct: 130 QTMRRIILPQMWARIIPPVSNETITLVKDTSLIYVLALNDLLRAARGIVQRDFTITPFVV 189 Query: 192 YCELAFVYLILT 203 A YL++T Sbjct: 190 ---AAGFYLVMT 198 >gi|307708017|ref|ZP_07644487.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus mitis NCTC 12261] gi|307615935|gb|EFN95138.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus mitis NCTC 12261] Length = 490 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 93/147 (63%), Gaps = 1/147 (0%) Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R I++ Sbjct: 312 LNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILA 371 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + KGQ++A+ A+G+T QT+R I+LPQ + +EF+ +K TSV + I++ E++ Sbjct: 372 VDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYF 431 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 + + + TYQ + +A +Y +LT Sbjct: 432 SGNTVATQTYQYFQTFTIIAVIYFVLT 458 >gi|225571603|ref|ZP_03780599.1| hypothetical protein CLOHYLEM_07701 [Clostridium hylemonae DSM 15053] gi|225159680|gb|EEG72299.1| hypothetical protein CLOHYLEM_07701 [Clostridium hylemonae DSM 15053] Length = 230 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 120/223 (53%), Gaps = 19/223 (8%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHFYV 62 N I S + + + VTL I + +I + +GF +A++R + T I++L+ Y+ Sbjct: 12 NFITKSRWKYILDGLGVTLKITFFAVLIGIALGFLVAIVRSTYDRTGKLKILNLLCKLYL 71 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVF-----DSFVAIIISLTLNFSAYISEIIRSSIISI 117 + RGTP++VQL +I++ ++F D + +++ +N AY++EI RS I+SI Sbjct: 72 TVIRGTPVVVQLLIIYF------VIFGSMDIDKVIVAVLAFGINSGAYVAEIFRSGIMSI 125 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQ++A ++G QT+ HII+PQ L +EFI +LK TSV+ I + ++ + Sbjct: 126 DNGQFEAGRSLGFNYTQTMIHIIMPQAFKNVLPALGNEFIVLLKETSVSGYIAMQDLTKG 185 Query: 178 AQRIVSTTYQPLIIYCELAFVY----LILTSFCYIIQIKIESS 216 I S T+ + +A +Y LI T +++ ++ SS Sbjct: 186 GDIIRSQTFDAFMPLIGVALIYLAMVLIFTKLVNMLERRLRSS 228 >gi|309388402|gb|ADO76282.1| amino acid ABC transporter membrane protein, PAAT family [Halanaerobium praevalens DSM 2228] Length = 220 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 62/162 (38%), Positives = 97/162 (59%), Gaps = 3/162 (1%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFD---SFVAIIISLTLNFSAYISEIIRSSIISI 117 YV FRGTPL+ QLF +++GLP I F+ F II L+LN AY+SE IR +I SI Sbjct: 57 YVSFFRGTPLITQLFFLYFGLPQIIPFFNRVNGFTIAIIGLSLNSGAYMSEAIRGAISSI 116 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ +AS ++G++ Q +R II+PQ + L + FI+I+K T++ TI + E+ T Sbjct: 117 DKGQMEASLSVGMSYFQAMRRIIMPQAARVAIPTLFNSFINIIKGTALTFTIGVTEVMAT 176 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 A+ +++Y+ + + +Y I+ IQ KIE +++ Sbjct: 177 AKMEGASSYRYFEAFANVIIIYWIVVQLFSFIQQKIEIKMSK 218 >gi|154246018|ref|YP_001416976.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] gi|154160103|gb|ABS67319.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] Length = 219 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 92/142 (64%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ +F+GTPLL+QLF+IF+GLP +G+ + A +SLTL SA+++EI R + SIPKG Sbjct: 56 YIELFQGTPLLMQLFLIFFGLPLLGLDVSPWAAAFVSLTLWSSAFLAEIWRGCVESIPKG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+AS ++ ++ + +R++ILPQ++ + P + ++K T++ S I E+ + A Sbjct: 116 QWEASSSLAMSFVEQLRYVILPQSMRIAVPPTVGFSVQVVKGTALTSIIGFVELSKAATI 175 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 I + T++P +Y A +Y L Sbjct: 176 ITNATFEPFTVYGFAALIYFAL 197 >gi|330954816|gb|EGH55076.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 229 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 123/207 (59%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +II P+L A +TL + I+ + LI+ + + R + +L + Y++ F Sbjct: 3 WEVIIKWLPRLAQGA-TLTLELVAIAVIAGLILAIPMGIARASRHWPVRALP-YAYIFFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+++YGL V D F ++++TL+ +AYI+EI+R ++ + Sbjct: 61 RGTPLLVQLFLVYYGLAQFESVRQSALWPYLRDPFWCAVVTMTLHTAAYIAEILRGAMQA 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P G+ +A+ A+G+++ + + +I+LP+ S+E I +LK++++AST+T+ E+ Sbjct: 121 VPPGEIEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I++ TY P+ I+ YL++T Sbjct: 181 MARTIIARTYLPVEIFFAAGMFYLVMT 207 >gi|325971014|ref|YP_004247205.1| polar amino acid ABC transporter inner membrane subunit [Spirochaeta sp. Buddy] gi|324026252|gb|ADY13011.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta sp. Buddy] Length = 286 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 87/133 (65%), Gaps = 1/133 (0%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 ++++ YV + RG PLLVQL I+Y + + +A +++L++ F AY+ EI+R+ Sbjct: 120 VNMVSGVYVELIRGIPLLVQLIFIYYAMGRF-FKIEGMIAAVVALSICFGAYMGEIVRAG 178 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I +IPKGQ +A+ A+GL+R Q R++ILPQTI + +EFIS+LK +S+ STI + + Sbjct: 179 IQAIPKGQMEAAIALGLSRSQAFRYVILPQTIKVVLPAIGNEFISMLKDSSLVSTIALSD 238 Query: 174 IFQTAQRIVSTTY 186 I + + +S T+ Sbjct: 239 ILRKGREYISRTF 251 >gi|229591529|ref|YP_002873648.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229363395|emb|CAY50556.1| putative permease component of ABC transporter [Pseudomonas fluorescens SBW25] Length = 258 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 62/182 (34%), Positives = 102/182 (56%), Gaps = 12/182 (6%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI------------VFDSFVAIIIS 97 + ++ L + FYVW+ RGTPLLVQ+ ++ L GI V + A II+ Sbjct: 51 KNPLLHLPVRFYVWLMRGTPLLVQIVFLYTALAAGGIFRFEDIELFGLIVPGNIQAAIIA 110 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 L LN AY++EIIR+ I ++ KGQ++A ++G+ + +R I+LPQ PL +EF Sbjct: 111 LGLNEGAYMAEIIRAGIGAVDKGQYEAGRSLGMGFAKLMRRIVLPQAFRVIVPPLGNEFN 170 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +LK+T++ S I + E+ + Q I S T++ +Y +A +L LT+ Q +E+ Sbjct: 171 VMLKNTTLVSVIGVQELLLSTQMITSATFRVFELYLVVALYFLTLTTLWGFFQRWLETRF 230 Query: 218 TQ 219 +Q Sbjct: 231 SQ 232 >gi|255324615|ref|ZP_05365732.1| ABC-type amino acid transport system, permease component [Corynebacterium tuberculostearicum SK141] gi|311740518|ref|ZP_07714345.1| amino acid ABC superfamily ATP binding cassette transporter [Corynebacterium pseudogenitalium ATCC 33035] gi|255298521|gb|EET77821.1| ABC-type amino acid transport system, permease component [Corynebacterium tuberculostearicum SK141] gi|311304038|gb|EFQ80114.1| amino acid ABC superfamily ATP binding cassette transporter [Corynebacterium pseudogenitalium ATCC 33035] Length = 317 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 125/219 (57%), Gaps = 27/219 (12%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP- 82 T+ I +S +I ++ G +AV+R+ + ++ + ++W+FRGTP+ VQL +F+GL Sbjct: 76 TIAITILSMIIGVVGGAILAVMRMS-PNPVLRSVSWIFLWVFRGTPIYVQL--VFWGLLS 132 Query: 83 ------HIG--------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 ++G I+ ++F ++ L LN +AY++EI+RS I S+P+GQ +AS A+ Sbjct: 133 AIYQSINLGFTEVSLQTILTNAFFLAVMGLGLNEAAYMAEIVRSGITSVPEGQKEASKAL 192 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP---EIFQTAQRIVSTT 185 G++ T+R +LPQ + P +EFIS+LK++S+ + IP EIF + I + Sbjct: 193 GMSWWMTMRRTVLPQAMRIIIPPTGNEFISLLKTSSL--VVAIPYTEEIFGRSTDISAAL 250 Query: 186 YQPLIIYCELAFVYLILTSFC----YIIQIKIESSVTQH 220 +QP+ + A YL++TS Y ++ + E T+ Sbjct: 251 FQPIPLLLVAASWYLVVTSLLMVGQYFLERRFERGATRE 289 >gi|163789692|ref|ZP_02184129.1| glutamine ABC transporter, permease protein [Carnobacterium sp. AT7] gi|159874914|gb|EDP68981.1| glutamine ABC transporter, permease protein [Carnobacterium sp. AT7] Length = 216 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 121/207 (58%), Gaps = 13/207 (6%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W N+ + L ++VT+ +A +S V S IIG + ++R + + S I+ V Sbjct: 7 FSWMNI------RFLLDGLLVTVEVALLSIVFSFIIGAILGLLR-YMKIPVFSKIIGAIV 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + R PLL+ +F ++ LP IGI FD F + + +LT+ SA +SEIIR+ + S+P GQ Sbjct: 60 DLIRNLPLLLIIFFTYFALPQIGIRFDIFWSAVAALTIFESAMLSEIIRAGLNSVPSGQM 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A + GL+ QT+ I++PQ P+ S+ IS++K TS+A+ I++PE+ A+ I Sbjct: 120 EAGRSTGLSYLQTLWFILIPQAFKAMVPPIVSQLISLIKDTSLATIISLPELTHNARIIY 179 Query: 183 --STTYQPLIIYCELAFVYLILTSFCY 207 +TTY + ++ LAF Y I+ CY Sbjct: 180 GQNTTYV-IPMFIALAFFYFII---CY 202 >gi|237808728|ref|YP_002893168.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] gi|237500989|gb|ACQ93582.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] Length = 218 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 64/197 (32%), Positives = 113/197 (57%), Gaps = 5/197 (2%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D LL AA TL ++ I+F+ + G + +R ++ L++ Y +F+GTPL Sbjct: 8 DILRNLLLAA-RWTLLLSLIAFIGGTLFGLLLTFMRTSRRKPLV-LLVRGYTELFQGTPL 65 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L+QLF+ F+GL +GI ++ A ++L L SA++ +I I S+PKGQW+AS +GL Sbjct: 66 LMQLFLAFFGLSLLGIDVSAWTAATLALVLFSSAFLCDIWSGCIESLPKGQWEASRCLGL 125 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + QT+R++ILPQ + + P + ++K T++ S I E+ + + + T+QP Sbjct: 126 SFFQTMRYVILPQALRVAIAPTVGFSVQVVKGTALTSIIGFVELTKAGTMLNNATFQPFK 185 Query: 191 IYCELAFVYLILTSFCY 207 ++ +A +Y ++ CY Sbjct: 186 VFALVALIYFMI---CY 199 >gi|119387647|ref|YP_918681.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119378222|gb|ABL72985.1| amino acid ABC transporter membrane protein 2, PAAT family [Paracoccus denitrificans PD1222] Length = 214 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 110/193 (56%), Gaps = 4/193 (2%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L A V T ++ I+FV+ +G IAV+R+ ++ ++ I Y+ I +GTPLLV + Sbjct: 8 QALLTAAVWTAGLSLIAFVLGGAVGLLIAVMRVS-ANRVLRGIAFTYIQIVQGTPLLVMM 66 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 + F+GL +G F A ++ + SAY EI R I+++PK QW+A+ + L Q Sbjct: 67 MLAFFGLSILGFDLTPFAAASFAMVIYSSAYFGEIWRGGILAVPKTQWEAAECLALHPVQ 126 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 +I+PQ + S P + I+K+TS+AS I + E+ T++ I ++T+QP II+ Sbjct: 127 RFWLVIIPQGLRISTPPTVGFMVQIVKNTSLASVIGVAELTYTSKLINNSTFQPFIIFSV 186 Query: 195 LAFVYLILTSFCY 207 +A +Y + CY Sbjct: 187 VAVLYFCM---CY 196 >gi|146320886|ref|YP_001200597.1| amino acid ABC transporter periplasmic protein [Streptococcus suis 98HAH33] gi|145691692|gb|ABP92197.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus suis 98HAH33] Length = 734 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 66/214 (30%), Positives = 121/214 (56%), Gaps = 9/214 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ +++ QLL + + +T+ +A +SF I+++IG + + + + +V + RG Sbjct: 519 LLKNNYGQLL-SGLGITIGLALLSFAIAIVIGIIFGMFAVS-PVKALRVTSSVFVDVVRG 576 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ IF+G+P++ + FVA I+L+LN AYI+EI+R I ++P G Sbjct: 577 IPLMIVAAFIFWGIPNLIESMTGQQSPINDFVAGTIALSLNSGAYIAEIVRGGIQAVPAG 636 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G++ T+R IILPQ ++F+ LK T++ S I + E+FQ + Sbjct: 637 QMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTTIISAIGLVELFQAGKI 696 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I++ YQ +Y LA +YL++ + + K+E Sbjct: 697 IIARNYQSFRMYAILAIIYLVVITLLTRLARKLE 730 >gi|256830361|ref|YP_003159089.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] gi|256579537|gb|ACU90673.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] Length = 271 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 69/237 (29%), Positives = 131/237 (55%), Gaps = 22/237 (9%) Query: 1 MKYEW-------FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI 53 M Y W F L+ D P L +TL ++ + FV + ++ A++R+ S ++ Sbjct: 39 MGYNWQWYRVPRFILLPDGSPGPLLQGAGITLLVSALGFVGAAVLALGTALLRL--SGSV 96 Query: 54 IS-LIMHFYVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 + Y+ + R TPLLVQ+F +++ L P +G+ + +++L L AY SEIIR Sbjct: 97 VGQAAARCYLELIRNTPLLVQIFFVYFVLAPAVGL--GRLPSAVLALALFEGAYASEIIR 154 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + I++IP+GQW+ + ++G++R +ILPQ + PL+S+ +S++K +++ STI I Sbjct: 155 AGILAIPRGQWEGALSLGMSRASVYMQVILPQALRNILPPLTSQAVSLIKDSALVSTIAI 214 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIK-----IESSVTQ 219 ++ Q I++ T+ I+ +A +YL+ L+S +++ + +E S T+ Sbjct: 215 YDLTMHGQAIIAETFLSFEIWSVVAAIYLVFTVTLSSLARLLEKRSSSPHLEGSCTE 271 >gi|307131970|ref|YP_003883986.1| Octopine transport system permease occM [Dickeya dadantii 3937] gi|306529499|gb|ADM99429.1| Octopine transport system permease protein occM [Dickeya dadantii 3937] Length = 238 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/196 (34%), Positives = 112/196 (57%), Gaps = 10/196 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +A+ VTL + SF + + + +R+ +S Y+ IFRGTPLL+QLF+ Sbjct: 14 LLSALPVTLGLFFSSFALGATLSVLLVAMRVS-GVWPLSGFARLYMLIFRGTPLLIQLFL 72 Query: 77 IFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 I+YGL +V DS F +++L L + Y +EI+R +++SIP GQ +A A Sbjct: 73 IYYGLGQFSVVRDSLFWPVLRDPFSCAVVALALCTAGYTAEILRGALLSIPAGQIEAGLA 132 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++R +R II P + + S+E I ++KST++AS +T+ ++ AQ+I+ TY+ Sbjct: 133 CGMSRWLLLRRIIAPVALRHALPAWSTEAILLIKSTALASLVTVWDVTGVAQQIIQRTYR 192 Query: 188 PLIIYCELAFVYLILT 203 L ++ A +YL+L Sbjct: 193 TLEVFACAALIYLLLN 208 >gi|303240911|ref|ZP_07327422.1| polar amino acid ABC transporter, inner membrane subunit [Acetivibrio cellulolyticus CD2] gi|302591497|gb|EFL61234.1| polar amino acid ABC transporter, inner membrane subunit [Acetivibrio cellulolyticus CD2] Length = 210 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 62/179 (34%), Positives = 108/179 (60%), Gaps = 4/179 (2%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 LL +VV++ + ++ + +L +G I+ R + IIS I Y+ I RGTPL++QL Sbjct: 6 LLCDGMVVSIELFLLTLIFALPLGLIISFGR-RAKNRIISAIAGIYISIMRGTPLMLQLV 64 Query: 76 VIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 V+++G ++ G D F A +I+L LN++AY +EI R I SIPKGQ++A +G T+ Q Sbjct: 65 VVYFGPYYVFGGKIDRFPAAVIALVLNYAAYFAEIFRGGIDSIPKGQYEAGEVLGFTKVQ 124 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTYQPLII 191 I+LPQ + +S+E I+++K T++ + I + E+F+ A ++ + QP+ + Sbjct: 125 VFFKIVLPQVVKRILPAISNEVITLVKDTALVTAIGVAEMFKAANNEMTRIGSMQPVFV 183 >gi|294101060|ref|YP_003552918.1| polar amino acid ABC transporter, inner membrane subunit [Aminobacterium colombiense DSM 12261] gi|293616040|gb|ADE56194.1| polar amino acid ABC transporter, inner membrane subunit [Aminobacterium colombiense DSM 12261] Length = 223 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 112/196 (57%), Gaps = 2/196 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D P LL I++TL + +S + G IA+ R++ ++TI S + YV F+GTPL Sbjct: 10 DVLPALL-TGIIMTLKLIVVSIPFGIAAGTVIAIGRVYGNNTI-SFLCRLYVIFFKGTPL 67 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L+ LF++++GLP GI F A ++ + AY SE IR +I S+ GQ A+ A+G+ Sbjct: 68 LILLFMLYFGLPSFGITLSPFAASVLGFIICNGAYNSEYIRGAIQSVKGGQLIAAQALGM 127 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T+ Q I +IILPQ + S+E I ++K +S+A +T E+ + + S +++ + Sbjct: 128 TKWQAILNIILPQAFRRAIPGCSNEMIYLIKYSSLAYMLTYIELTGAGKIVASRSFRYTL 187 Query: 191 IYCELAFVYLILTSFC 206 ++ + +YLI+ + Sbjct: 188 VFTVVGVIYLIMVTLA 203 >gi|330813244|ref|YP_004357483.1| putative amino acid ABC transporter, permease protein [Candidatus Pelagibacter sp. IMCC9063] gi|327486339|gb|AEA80744.1| putative amino acid ABC transporter, permease protein [Candidatus Pelagibacter sp. IMCC9063] Length = 239 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 63/171 (36%), Positives = 107/171 (62%), Gaps = 2/171 (1%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSF 91 VI++++G IA+ I + +S + FYV + R PLLV + ++YGLP + G+ F F Sbjct: 56 VIAMVVGLLIAIPAIT-KNKYLSYVNVFYVEVVRSVPLLVLILWVYYGLPILTGLSFSPF 114 Query: 92 VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP 151 V+ II+L+++ SA+++EI R I +I K QW+A+ ++GL + ++ +ILPQ Sbjct: 115 VSGIIALSISESAFMAEIFRGGINAIKKTQWEAATSLGLNFSKKLKLVILPQAFKVILPA 174 Query: 152 LSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 L ++F+ +LK +S+ S I I ++ + A +V +TY+PL IY L YL+L Sbjct: 175 LGNQFVYVLKMSSLVSIIGISDLTRKANELVVSTYRPLEIYTFLILEYLVL 225 >gi|289627333|ref|ZP_06460287.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650580|ref|ZP_06481923.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 2250] gi|330870381|gb|EGH05090.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330892337|gb|EGH24998.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] Length = 229 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 123/207 (59%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +II P+L A +TL + I+ + LI+ + + R + +L + Y++ F Sbjct: 3 WEVIIKWLPRLAQGA-TLTLELVAIAVIAGLILAIPMGIARASRHWPVRAL-PYAYIFFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+++YGL V D F ++++TL+ +AYI+EI+R +I + Sbjct: 61 RGTPLLVQLFLVYYGLAQFESVRQSALWPYLRDPFWCAVVTMTLHTAAYIAEILRGAIQA 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P G+ +A+ A+G+++ + + +I+LP+ S+E I +LK++++AST+T+ E+ Sbjct: 121 VPVGEVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I++ TY P+ I+ YL++T Sbjct: 181 MARTIIARTYLPVEIFFAAGMFYLVMT 207 >gi|148378448|ref|YP_001252989.1| amino acid ABC transporter permease [Clostridium botulinum A str. ATCC 3502] gi|153931220|ref|YP_001382837.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A str. ATCC 19397] gi|153935969|ref|YP_001386404.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A str. Hall] gi|148287932|emb|CAL81998.1| binding-protein-dependent transport system,membrane component [Clostridium botulinum A str. ATCC 3502] gi|152927264|gb|ABS32764.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A str. ATCC 19397] gi|152931883|gb|ABS37382.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A str. Hall] Length = 211 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/165 (35%), Positives = 100/165 (60%), Gaps = 5/165 (3%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + +I+ Y WIFRGTPL++QLF ++GLP IGI + A ++ +N+ AY++E R+ Sbjct: 47 LKIILSAYTWIFRGTPLMLQLFFAYFGLPVIGIRLEPLTAAYLTFIINYGAYLAETFRAG 106 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SI +GQ +A+ +G T QT+ II+PQ I P+ +E I+++K +++ + I I + Sbjct: 107 IESIDEGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKDSALVAAIGIGD 166 Query: 174 IFQTAQRIVST--TYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 + + A+ +V+ T P I A +YL++T+F +I +E Sbjct: 167 MLRAAKEVVTRDFTITPFFI---AAAIYLLITAFLVLIFRTLEKK 208 >gi|15888716|ref|NP_354397.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] gi|15156458|gb|AAK87182.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] Length = 219 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 91/144 (63%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 +YV +F+GTPLL+QLF+ F+GL +GI +++A ++L L +A+++EI R + S+ Sbjct: 54 RYYVELFQGTPLLMQLFIAFFGLGLVGIDVPAWLAAGLTLILWAAAFLTEIWRGCVESVA 113 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQW+AS ++ + R Q +R++ILPQ + + P F+ ++K T+V S I E+ + Sbjct: 114 KGQWEASASLAMGRLQQMRYVILPQAMRVAIPPTVGFFVQVIKGTAVTSIIGFVELSKAG 173 Query: 179 QRIVSTTYQPLIIYCELAFVYLIL 202 + + T+QP +Y +A +Y L Sbjct: 174 TVVTNATFQPFTVYGLVALIYFAL 197 >gi|87122497|ref|ZP_01078377.1| putative amino acid ABC transporter, permease protein [Marinomonas sp. MED121] gi|86162290|gb|EAQ63575.1| putative amino acid ABC transporter, permease protein [Marinomonas sp. MED121] Length = 216 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 57/157 (36%), Positives = 97/157 (61%), Gaps = 3/157 (1%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEII 110 + + ++ YV +F+GTPLL+Q+F+ F+GL +G ++ A I+SLTL SA++ EI Sbjct: 46 NATVQKVVRIYVELFQGTPLLMQMFLCFFGLSMLGYEISAWGAAILSLTLFTSAFLVEIW 105 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R I ++PKGQ +AS +GL+ QT+R+IILPQ I + P + ++K T++AS I Sbjct: 106 RGCIDTLPKGQREASRCLGLSFLQTLRYIILPQAIRVATPPTVGFSVQVIKGTALASVIG 165 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 E+ + + + T++P ++ +A +Y +L CY Sbjct: 166 FVELTKVGTMLNNATFEPFKVFTLVALIYFLL---CY 199 >gi|330832852|ref|YP_004401677.1| polar amino acid ABC transporter inner membrane subunit [Streptococcus suis ST3] gi|329307075|gb|AEB81491.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis ST3] Length = 732 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 66/214 (30%), Positives = 121/214 (56%), Gaps = 9/214 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ +++ QLL + + +T+ +A +SF I+++IG + + + + +V + RG Sbjct: 517 LLKNNYGQLL-SGLGITIGLALLSFAIAIVIGIIFGMFAVS-PVKALRVTSSVFVDVVRG 574 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ IF+G+P++ + FVA I+L+LN AYI+EI+R I ++P G Sbjct: 575 IPLMIVAAFIFWGIPNLIESITGQQSPINDFVAGTIALSLNSGAYIAEIVRGGIQAVPAG 634 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G++ T+R IILPQ ++F+ LK T++ S I + E+FQ + Sbjct: 635 QMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTTIISAIGLVELFQAGKI 694 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I++ YQ +Y LA +YL++ + + K+E Sbjct: 695 IIARNYQSFRMYAILAIIYLVVITLLTRLARKLE 728 >gi|223932270|ref|ZP_03624273.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] gi|223898951|gb|EEF65309.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] Length = 732 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 66/214 (30%), Positives = 121/214 (56%), Gaps = 9/214 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ +++ QLL + + +T+ +A +SF I+++IG + + + + +V + RG Sbjct: 517 LLKNNYGQLL-SGLGITIGLALLSFAIAIVIGIIFGMFAVS-PVKALRVTSSVFVDVVRG 574 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ IF+G+P++ + FVA I+L+LN AYI+EI+R I ++P G Sbjct: 575 IPLMIVAAFIFWGIPNLIESITGQQSPINDFVAGTIALSLNSGAYIAEIVRGGIQAVPAG 634 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G++ T+R IILPQ ++F+ LK T++ S I + E+FQ + Sbjct: 635 QMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTTIISAIGLVELFQAGKI 694 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I++ YQ +Y LA +YL++ + + K+E Sbjct: 695 IIARNYQSFRMYAILAIIYLVVITLLTRLARKLE 728 >gi|222081098|ref|YP_002540461.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725777|gb|ACM28866.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 222 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 117/211 (55%), Gaps = 10/211 (4%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFYVWIFRGTPLLV 72 LL I +TL + ++F +L+ G F+ + R + T+ I+ + Y+ +FR TP+LV Sbjct: 15 DLLLRGIRLTLTLWALAFSGALVAGLFLGLAR---ASTVKWINWLATGYIEVFRNTPVLV 71 Query: 73 QLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 QL +Y P + G SF A + L LN SAY +EI R+ + S+ GQW+A+ A+G+T Sbjct: 72 QLIWFYYAFPVLTGWQMSSFTAAALGLFLNTSAYCAEIWRAGLQSVASGQWEAASALGMT 131 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 ++T+ IILPQ ++ + + K TS+AS IT+ E+ A+ + + ++ PL Sbjct: 132 TRRTLARIILPQAARRMIPAFTNRGVELAKMTSIASVITVQELMYEAKMLSTQSFLPLET 191 Query: 192 YCELAFVYLIL----TSFCYIIQIKIESSVT 218 + +A +Y ++ T Y ++ ++ S T Sbjct: 192 FSVVAVIYFLVIYPGTLAAYGLERRLNSRGT 222 >gi|190894713|ref|YP_001985006.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700374|gb|ACE94456.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 219 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 105/187 (56%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + + P LL +T+ + +++++G +A+ R IS + F Sbjct: 1 MEWDW-DFVWQIMPTLL-EGFKITILATVLGAAVAMVVGLGLAIAR-RSPVAAISRTVGF 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL+ IFY LP IGI A +I + ++++ Y +E+ R+ I ++P+G Sbjct: 58 VSEFIRGTPLLVQLYFIFYVLPDIGIRLSPLTAGVIGMGIHYATYTAEVYRAGIENVPRG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A L +Q H++LPQ I L++ FI++ K T + S IT+ E+ A+ Sbjct: 118 QWEAARATNLATRQAWIHVVLPQAIPPMIPALANYFIAMFKETPLLSAITVLELMNQAKS 177 Query: 181 IVSTTYQ 187 I ++ Y+ Sbjct: 178 IANSNYR 184 >gi|92115412|ref|YP_575340.1| amino acid ABC transporter permease [Chromohalobacter salexigens DSM 3043] gi|91798502|gb|ABE60641.1| amino acid ABC transporter membrane protein, PAAT family [Chromohalobacter salexigens DSM 3043] Length = 223 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 12/207 (5%) Query: 2 KYEWFNLIIDSFPQLLYA---AIVVTLPIACISFVISLIIGFF-IAVIRIFFSDTIISLI 57 +++W I S P LL ++++ I FVI +I G I +R+ I Sbjct: 6 QFDW-QAAIASIPHLLTGIPWTLLISFGGLAIGFVIGIIFGLLRINPLRVLRWPAIA--- 61 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 Y+ +FRGTP+LVQ+ IFYGLP + G ++ VA I ++ LN AYISEI+R + S Sbjct: 62 ---YIEVFRGTPVLVQVLFIFYGLPQLLGGPINAVVAGIAAIALNAGAYISEIVRGGVQS 118 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I KGQ +A ++GL+R T R+II PQ + L ++ I +K TS+ S I + E+ + Sbjct: 119 IEKGQREAGLSLGLSRIDTFRYIIWPQALRRMIPALGNQGIVSIKDTSLFSVIGVGELVR 178 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 Q ++TT+ L +Y +A +YL++T Sbjct: 179 QGQVYIATTFTALEVYFMVAMLYLVIT 205 >gi|148379978|ref|YP_001254519.1| amino acid ABC transporter permease [Clostridium botulinum A str. ATCC 3502] gi|153933019|ref|YP_001384277.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A str. ATCC 19397] gi|153941251|ref|YP_001391341.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum F str. Langeland] gi|168179724|ref|ZP_02614388.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum NCTC 2916] gi|148289462|emb|CAL83559.1| probable amino acid ABC transporter, permease protein [Clostridium botulinum A str. ATCC 3502] gi|152929063|gb|ABS34563.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A str. ATCC 19397] gi|152937147|gb|ABS42645.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum F str. Langeland] gi|182669187|gb|EDT81163.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum NCTC 2916] gi|295319370|gb|ADF99747.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum F str. 230613] Length = 228 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/163 (35%), Positives = 95/163 (58%), Gaps = 10/163 (6%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD----------SFVAIIISLTL 100 + I+ I Y+ RGTP+LVQL++I+YGLP IGI F F A I++L++ Sbjct: 46 NKILKYIAVSYIEFIRGTPVLVQLYIIYYGLPTIGIKFPEVPILGSNFPDFFAGILALSI 105 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N AY++EIIR+ I ++ KGQ +A+ ++G++ ++++I+PQ L +EFI+I+ Sbjct: 106 NSGAYVAEIIRAGIQAVDKGQMEAARSLGMSESMAMKNVIIPQAFKNILPALGNEFITII 165 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 K +S+ S I I E+ A + ++P A +Y ILT Sbjct: 166 KESSIVSIIGIHELMYNADTVRGNIFRPFEPLLVAALMYFILT 208 >gi|145295472|ref|YP_001138293.1| hypothetical protein cgR_1405 [Corynebacterium glutamicum R] gi|140845392|dbj|BAF54391.1| hypothetical protein [Corynebacterium glutamicum R] Length = 316 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 122/216 (56%), Gaps = 27/216 (12%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A + T+ + +S ++ +++G +AV+R+ + ++ + Y+WIFRGTP+ VQL +F+ Sbjct: 69 AALHTIALTLLSMILGVVLGAILAVMRMS-GNPVMQGVAWLYLWIFRGTPIYVQL--VFW 125 Query: 80 GLPHIGIVFDS-----------------FVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 GL +G ++ S F+ +I L LN +AY++EI+RS I ++P+GQ Sbjct: 126 GL--LGSLYQSINLGFAEIDLQSLLSNMFLLAVIGLGLNEAAYMAEIVRSGIQAVPEGQM 183 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP---EIFQTAQ 179 +AS A+G+ T+R ILPQ + P +E IS+LK+TS+ + IP E++ + Sbjct: 184 EASKALGMNWSMTMRRTILPQAMRIIIPPTGNELISMLKTTSL--VVAIPYSLELYGRSM 241 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 I + ++P+ + A YL++TS + Q +E Sbjct: 242 DIAYSLFEPVPMLLVAASWYLVITSILMVGQYYLEK 277 >gi|229015972|ref|ZP_04172933.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1273] gi|229022189|ref|ZP_04178739.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1272] gi|228739120|gb|EEL89566.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1272] gi|228745332|gb|EEL95373.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1273] Length = 214 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 105/163 (64%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + ++S ++ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSIIGILR-YMKIPVVSQVLGIIVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP +G+ + A+I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEVGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVGISLPELMHNAQ 176 >gi|146279204|ref|YP_001169362.1| Asp/Glu racemase [Rhodobacter sphaeroides ATCC 17025] gi|145557445|gb|ABP72057.1| Asp/Glu racemase [Rhodobacter sphaeroides ATCC 17025] Length = 219 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 49/122 (40%), Positives = 80/122 (65%) Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPLLVQL+ IFY LP G++ VA +I + L+++ Y +E+ R+ I ++P+GQW+A+ Sbjct: 63 RGTPLLVQLYFIFYVLPDAGVLLPPLVAGVIGMGLHYATYAAEVYRAGIENVPRGQWEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A LT QT RH+I+PQ I L++ I++ K T + S IT+ E+ A+ + +++ Sbjct: 123 RATNLTAAQTWRHVIVPQAIPPMIPALANYLIAMFKETPLLSAITVLELMNQAKSVANSS 182 Query: 186 YQ 187 Y+ Sbjct: 183 YR 184 >gi|300716303|ref|YP_003741106.1| ABC polar amino acid family transporter inner membrane subunit [Erwinia billingiae Eb661] gi|299062139|emb|CAX59255.1| ABC polar amino acid family transporter, inner membrane subunit [Erwinia billingiae Eb661] Length = 305 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 73/226 (32%), Positives = 127/226 (56%), Gaps = 29/226 (12%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + +V T + + ++++++G IAV+R+ ++ ++S ++W FRGTP+LV Sbjct: 78 FSPTILSGLVTTSWLTLVIMLLAIVLGVVIAVMRLS-TNPLLSGFSGGWIWFFRGTPVLV 136 Query: 73 QLFVIFY------------GLPHI-----GIVFD---SFVAIIISLTLNFSAYISEIIRS 112 QL IF+ G+P + G + D + A I+ L LN SAY++EIIR+ Sbjct: 137 QL--IFWYNLAALYPTVNIGIPGVFSLWQGSMNDLITPWTAAILGLGLNESAYMAEIIRA 194 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I S+ GQ +A+ A+G+T+ Q ++ +ILPQ + P ++ I +LK+TS+ S I++ Sbjct: 195 GISSVDDGQQEAARALGMTKNQYLKRVILPQAVPFIIPPTGNQIIGMLKTTSLVSVISLS 254 Query: 173 EIFQTAQRIVSTTYQP---LIIYCELAFVYLILTSFCYIIQIKIES 215 ++ +AQ I S TY+ LI+ C YL+ T+ Q +IE Sbjct: 255 DLLYSAQAIYSRTYENIPLLIVAC---IWYLVATTLLSAAQTRIEK 297 >gi|229174829|ref|ZP_04302349.1| Arginine transport system permease protein artQ [Bacillus cereus MM3] gi|228608497|gb|EEK65799.1| Arginine transport system permease protein artQ [Bacillus cereus MM3] Length = 225 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 122/215 (56%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I +S ++ I+G +A+ +I +++ FY IF Sbjct: 11 FSAITPSIPYIL-KGLEVTLKIVAVSALVGFILGTLLALCKIA-RIRALNIAADFYTSIF 68 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P I G +FVA +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 69 RGTPLVLQLMIIYFGVPQIIGYEIPAFVAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 128 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 129 AMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 188 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y +L ++ IE + + Sbjct: 189 TFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKK 223 >gi|153010586|ref|YP_001371800.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151562474|gb|ABS15971.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 323 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 118/214 (55%), Gaps = 1/214 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I L+ +V TL I+ S + I+ AV ++ + +I + FY +F Sbjct: 107 FDFIARKIGFLISQGVVTTLYISAASIFFATILALIGAVAKLS-KNGLIYGLATFYTSLF 165 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG PLL+Q+++I+ GLP +G V A I++L+L + AY++EI R+ I SIP+GQ + + Sbjct: 166 RGLPLLMQIYIIYLGLPQVGYVIGPIPAGILALSLCYGAYMTEIFRAGIESIPRGQQEGA 225 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 YA+GL QT+ + LPQ + P ++FI++LK +S+ S I + E+ A+ T Sbjct: 226 YALGLGPSQTMWLVTLPQAMRIIIPPTGNQFIAMLKDSSLVSVIGVWELMYLARTQGQTE 285 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 ++ + + + +Y L+ Q K+E+ + Sbjct: 286 FRHIEMLITASMIYWALSIVLEYGQAKLEARFKR 319 >gi|171779738|ref|ZP_02920694.1| hypothetical protein STRINF_01575 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281840|gb|EDT47274.1| hypothetical protein STRINF_01575 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 517 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 115/209 (55%), Gaps = 13/209 (6%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMHFYVWI 64 F+ ++S+ + ++T+ ++ +S V++LI+G + R+ SD + IS + Y+ + Sbjct: 2 FSGFLESYGGFILDGALMTVFLSVVSMVLALILGGVVTAARM--SDNLLISGLTKLYIEV 59 Query: 65 FRGTPLLVQLFVIFYGLPHIG----------IVFDSFVAIIISLTLNFSAYISEIIRSSI 114 RG P+LV L + FYGLP +G + D +A + LT+ S +++EI RS I Sbjct: 60 IRGLPMLVILSLFFYGLPMLGLNIPKSTLFGVDLDRLIAALTGLTVGESVFVAEIYRSGI 119 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ GQ++ + +IG + Q R++I+PQ L +EF + +KS+S AS I + ++ Sbjct: 120 QAVDSGQFEGARSIGFNKFQAYRYVIIPQAFKNILPTLGNEFSNNIKSSSQASVIGVADL 179 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 TA I +Y+P + FVYL+ T Sbjct: 180 MFTASTIQGISYKPFQAVIAVGFVYLVFT 208 >gi|329116786|ref|ZP_08245503.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] gi|326907191|gb|EGE54105.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] Length = 522 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/172 (34%), Positives = 101/172 (58%), Gaps = 1/172 (0%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 I S++++ Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R Sbjct: 340 IFSVLLNIYIEIFRGTPMIVQAMVIYYGTAQAFGISLDRTLAAIFIVSINTGAYMTEIVR 399 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I+S+ GQ++A+ A+G T QT+R I++PQ + +EF+ +K TSV + I++ Sbjct: 400 GGILSVDNGQFEAATALGFTHGQTMRKIVIPQVMRNILPATGNEFVINIKDTSVLNVISV 459 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 E++ + + + YQ + +A +Y ILT I IE + TY+ Sbjct: 460 VELYFSGNTVATQNYQYFQTFSVIAVIYFILTFTVTRILRYIERRFDEDTYT 511 >gi|307308379|ref|ZP_07588084.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|306901180|gb|EFN31787.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 216 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 57/165 (34%), Positives = 107/165 (64%), Gaps = 6/165 (3%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +M Y+ IF+GTPLLVQLF++++GLP +G+ D ++A+ + L+L+ SA++ EI R SI + Sbjct: 52 LMATYIQIFQGTPLLVQLFIVYFGLPLLGLKVDIWMALTVGLSLHTSAFLGEIWRGSIQA 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF-ISILKSTSVASTITIPEIF 175 +P GQ +A+ A+G+ + ++LPQ A+P + F ++++K T++A+ + + E+ Sbjct: 112 VPPGQSEAARALGIGYVHRMIDVVLPQAFRI-ALPATIGFLVNLIKGTALAALLGLTELT 170 Query: 176 QTAQRIVSTTYQPLIIYCELAFVY----LILTSFCYIIQIKIESS 216 ++ Q + + T+QPL Y + VY L LT+F I+ ++ ++ Sbjct: 171 RSGQLMANITFQPLQAYGAVGLVYFFICLPLTTFSARIERRLNAA 215 >gi|228937880|ref|ZP_04100508.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970761|ref|ZP_04131401.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977336|ref|ZP_04137731.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis Bt407] gi|228782313|gb|EEM30496.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis Bt407] gi|228788886|gb|EEM36825.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821786|gb|EEM67786.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 214 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 103/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + ++S ++ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILR-YTKIPVVSQVLGVVVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|229125464|ref|ZP_04254521.1| Amino acid ABC transporter, permease protein [Bacillus cereus 95/8201] gi|228657992|gb|EEL13775.1| Amino acid ABC transporter, permease protein [Bacillus cereus 95/8201] Length = 219 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 122/210 (58%), Gaps = 15/210 (7%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +++ N I+ P L A + V L + I+ V+S+ +GF + + + + +S + Sbjct: 1 MSFDYINSIL--MPMLEGAQMTVLLFL--IAIVVSIPMGFLLT-LAVRSNLKPLSWLAQG 55 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGI-----VFDSFVAIIISLTLNFSAYISEIIRSSII 115 Y+++ RGTPLL+QL I +GLP + + V D FVA + LN++AY +EI R ++ Sbjct: 56 YIYVLRGTPLLLQLLFICFGLPMLPVIGEYLVMDRFVAACLGFILNYAAYFAEIFRGGLL 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +I KGQ++AS +GL++ QT+R +ILPQ + +++E ++++K T++ + +PE+ Sbjct: 116 AIDKGQYEASQVLGLSKWQTMRRVILPQMFRIALPAVANESVTLIKDTALLYAVAVPELL 175 Query: 176 QTAQRIVSTTY--QPLIIYCELAFVYLILT 203 AQ V+ + P + +YLI+T Sbjct: 176 HFAQTAVNRDFTITPFFVA---GLIYLIMT 202 >gi|299535498|ref|ZP_07048819.1| amino-acid ABC transporter permease protein [Lysinibacillus fusiformis ZC1] gi|298728698|gb|EFI69252.1| amino-acid ABC transporter permease protein [Lysinibacillus fusiformis ZC1] Length = 237 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 117/202 (57%), Gaps = 14/202 (6%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP---------- 82 ++ ++IG +A +RI I+S +++FYV FRGTP+++ + ++++GLP Sbjct: 31 LLGIVIGIIVAFVRIQ-QIKIVSSVLNFYVSFFRGTPIIMHIMLVYFGLPMLVDSVANLL 89 Query: 83 HIGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 H+ I +S +I++LTL+ AY SEIIRS I+++PKGQ +A+YAIGLT Q +R Sbjct: 90 HLKIQSNSIPILFFVILALTLSAGAYASEIIRSGILAVPKGQLEAAYAIGLTFPQAMRRY 149 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ S L++ FI L +TS+A ++I E+ A I S + L + + +Y Sbjct: 150 ILPQAFGQSIPNLTNVFIGFLHATSLAFFLSIKELTGVANIIASMNLKFLESFIAVGLIY 209 Query: 200 LILTSFCYIIQIKIESSVTQHT 221 ++ + +IE VT ++ Sbjct: 210 WGISIIVEWVSHRIEKRVTAYS 231 >gi|224368514|ref|YP_002602677.1| GlnP2 [Desulfobacterium autotrophicum HRM2] gi|223691230|gb|ACN14513.1| GlnP2 [Desulfobacterium autotrophicum HRM2] Length = 223 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 73/213 (34%), Positives = 111/213 (52%), Gaps = 4/213 (1%) Query: 6 FNLIIDSFPQLLYAA-IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 FN I+ P +L A + + L CI+ + +I G + V R++ S I I+ YV Sbjct: 5 FNYAIEILPDMLSGAWVTIELSFVCIT--VGIIFGLILGVARVY-SSKFIYWIVTAYVEF 61 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTP L+QLF I+YGL +G++ +A ++L +N S Y +E R +I SI GQ A Sbjct: 62 LRGTPCLLQLFFIYYGLGDMGLLLKPVLAAGLALGINTSVYQAEYFRGAIKSIKPGQMTA 121 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+GL + + IR+IILPQ + S+E I + K TSVA + +PE+ A + Sbjct: 122 ARAMGLGKWKAIRYIILPQALRLVIPSSSNEIIYMFKYTSVAFAVGVPELLSQADLTGAM 181 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 ++ Y A +Y I+ I IE V Sbjct: 182 NFRYFESYVVAAILYTIMVFVVAKIMAMIEKKV 214 >gi|83643770|ref|YP_432205.1| amino acid ABC transporter permease [Hahella chejuensis KCTC 2396] gi|83631813|gb|ABC27780.1| ABC-type amino acid transport system, permease component [Hahella chejuensis KCTC 2396] Length = 220 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 57/165 (34%), Positives = 98/165 (59%), Gaps = 1/165 (0%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I C+S ++ + F + R+F + T + I Y+ FRGT L+QL+ I++ LP Sbjct: 16 ITLKILCLSLPVAGALAFIAGLTRLF-APTPLRQIARVYIEFFRGTSALIQLYWIYFVLP 74 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 G+ D+ A +I+L LN AY +E++R S++++PKGQ++A+ A+ T + IILP Sbjct: 75 FFGLSLDAMTASVIALGLNIGAYGAEVVRGSVLAVPKGQYEAAVALNFTPWSRLWRIILP 134 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 Q++ P + I ++K+TS+ S ITI ++ A+ + T Q Sbjct: 135 QSLVNMIPPFGNLAIELMKATSLVSLITIGDLTYKAKTLADATLQ 179 >gi|78059832|ref|YP_366407.1| ABC amino acid transporter, inner membrane subunit [Burkholderia sp. 383] gi|77964382|gb|ABB05763.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia sp. 383] Length = 254 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 106/191 (55%), Gaps = 1/191 (0%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 + +L I VTL + S V+ +IG A + + +L+ YV + R TP LV Sbjct: 13 YAGMLARGIGVTLGLTAASTVLGGLIGTTGAWVALAGPRWARALVAA-YVELIRNTPFLV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF IF+GLP IG+ D A ++++T+N AY EI+R+ I S+P GQ A+ A+GL Sbjct: 72 QLFFIFFGLPGIGVHIDEAQAAVLAMTVNLGAYAVEILRAGIESVPHGQVQAARALGLHG 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +Q H++LPQ + L + + ++ ++V S I++P++ A I S ++ IY Sbjct: 132 RQVFGHVVLPQALANVYPALLGQVLIVMLGSAVVSQISVPDLTYAANYIQSRNFRAFEIY 191 Query: 193 CELAFVYLILT 203 + +YL+L+ Sbjct: 192 IVVTAIYLLLS 202 >gi|13470759|ref|NP_102328.1| ABC transporter permease [Mesorhizobium loti MAFF303099] gi|14021502|dbj|BAB48114.1| probable permease of ABC transporter [Mesorhizobium loti MAFF303099] Length = 239 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 112/205 (54%), Gaps = 13/205 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D + + ++VT+ +A + I L IGFFIA+ + + + L + Y +FRG P Sbjct: 15 DGWSDDIAYGVIVTVLLALATLPIGLTIGFFIALGKQS-EEPSLRLAANIYTTVFRGLPE 73 Query: 71 LVQLFVIFYGLP------------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 LV LF+ F+G+P I +SFVA +I L+L FS+Y SE+ S+ +IP Sbjct: 74 LVTLFLFFFGMPILLQHLIRYFRPEATIDVNSFVAGMIVLSLIFSSYASEVFLSAFRAIP 133 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ++ Y+IGL++ QT+R +ILPQ + + L + ++S+LK TS+ S + + E + A Sbjct: 134 KGQYEGGYSIGLSKWQTMRLVILPQLLRIAFPGLENCWLSLLKDTSLVSVVGLAETLRNA 193 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT 203 T + Y A V+L L Sbjct: 194 GVAARVTKHSFLFYSIAALVFLGLA 218 >gi|295693564|ref|YP_003602174.1| amino acid ABC transporter, permease protein [Lactobacillus crispatus ST1] gi|295031670|emb|CBL51149.1| Amino acid ABC transporter, permease protein [Lactobacillus crispatus ST1] Length = 215 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 97/161 (60%), Gaps = 5/161 (3%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +++FYVWI RGTPLL+QL +FYGLP I IVF + A + + LN++AY +EI R S Sbjct: 52 LVNFYVWIMRGTPLLLQLIFVFYGLPIIHIVFPRYQAALFAFVLNYAAYFAEIFRGGFQS 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ++A+ + L R QT+ II+PQ I + +E I+++K +S+ I + ++ + Sbjct: 112 IDEGQFEAAKVLRLNRWQTMTKIIIPQVIKIVLPSIGNEVINLVKDSSLVYVIGLGDLLR 171 Query: 177 TAQRIVS--TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 ++ T PL++ + +YL+L C + K+E+ Sbjct: 172 AGNVAMARDVTLVPLVL---VGVIYLLLIGICAFVLKKLEN 209 >gi|239629874|ref|ZP_04672905.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239527486|gb|EEQ66487.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 220 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 115/202 (56%), Gaps = 8/202 (3%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W NL + L + VTL ++ +S S I+G + + R + S I+ F + Sbjct: 8 YSWINL------RYLLQGLGVTLEVSIVSIFFSFILGVILGLAR-YVKIKYFSAIVGFVI 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + R PLL+ LF ++ LP IGI + A II++++ SA ++EI+RS I ++P+GQ Sbjct: 61 DLIRNLPLLLILFFTYFALPDIGIRLNVVAAAIIAMSIFESAMLAEIVRSGINAVPRGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ + GLT Q +R+II+PQ + P+ S+FIS++K TS+A+ I +PE AQ I Sbjct: 121 EAARSNGLTFYQAMRYIIMPQALKKMIPPIVSQFISLVKDTSLATIILLPEATYHAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLILT 203 +I ++ LA +Y ++ Sbjct: 181 GQNINYMIPMFVALAVMYFVVN 202 >gi|253751794|ref|YP_003024935.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis SC84] gi|253753617|ref|YP_003026758.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis P1/7] gi|251816083|emb|CAZ51704.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis SC84] gi|251819863|emb|CAR45878.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis P1/7] gi|319758142|gb|ADV70084.1| amino acid ABC transporter periplasmic protein [Streptococcus suis JS14] Length = 732 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 66/214 (30%), Positives = 121/214 (56%), Gaps = 9/214 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ +++ QLL + + +T+ +A +SF I+++IG + + + + +V + RG Sbjct: 517 LLKNNYGQLL-SGLGITIGLALLSFAIAIVIGIIFGMFAVS-PVKALRVTSSVFVDVVRG 574 Query: 68 TPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL++ IF+G+P++ + FVA I+L+LN AYI+EI+R I ++P G Sbjct: 575 IPLMIVAAFIFWGIPNLIESMTGQQSPINDFVAGTIALSLNSGAYIAEIVRGGIQAVPAG 634 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G++ T+R IILPQ ++F+ LK T++ S I + E+FQ + Sbjct: 635 QMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTTIISAIGLVELFQAGKI 694 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I++ YQ +Y LA +YL++ + + K+E Sbjct: 695 IIARNYQSFRMYAILAIIYLVVITLLTRLARKLE 728 >gi|209547730|ref|YP_002279647.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533486|gb|ACI53421.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 219 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 65/178 (36%), Positives = 101/178 (56%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L A + VT+ + S ++ IGF +A++R F + +++L + Y I P L L Sbjct: 12 QGLAAGLGVTVLVTLASLAFAIGIGFLLALVRQFTAIRVVNLAIDAYCEILCNVPALTHL 71 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F++++GL IG+ S A I+ L L +A S I R+ S+PKGQ +AS A GLT Q Sbjct: 72 FILYFGLASIGVRLTSIAAAILGLGLIGAAITSSIFRAGFASLPKGQAEASLAAGLTPLQ 131 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 TI I+ PQ + + L + + +LK TSV S I PEI A+ +V++++Q +IY Sbjct: 132 TIFEILTPQAMRIALPALGNYAVQLLKDTSVVSAIAAPEIMFFARSMVTSSFQTTMIY 189 >gi|325496746|gb|EGC94605.1| glutamine ABC transporter permease protein [Escherichia fergusonii ECD227] Length = 219 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 123/219 (56%), Gaps = 5/219 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P L+ A +TL I+ + L+IG R F I + I Sbjct: 1 MQFDW-SAIWTAIPLLIEGA-KMTLWISVLGLAGGLVIGLLAGFARTF-GGWIANHIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R +TIR++ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 Q I++ ++ L I+ +A YLI+T I ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRM 216 >gi|303247516|ref|ZP_07333788.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] gi|302491212|gb|EFL51104.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] Length = 269 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEII 110 + I+L+ YV + RG PLLVQLF I+Y L + V D +A +IS+++ + AY+ E+ Sbjct: 98 NKYINLVASTYVEVVRGVPLLVQLFYIYYALGRMVQVPD-LLAAVISMSVCYGAYMGEVF 156 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R+ I +IP GQ +A+ ++G R QT+ H+ILPQ T P+ +EFI++LK TS+ S + Sbjct: 157 RAGITAIPIGQTEAARSLGFNRAQTMYHVILPQAWRTILPPVGNEFIALLKDTSLVSILG 216 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + ++ + + S +++ + +A +YLI+T + +E ++ H Sbjct: 217 VADLLRRGREYASESFEYFETFTMVAVIYLIITLILSKLVSIMEERLSHH 266 >gi|317053038|ref|YP_004119392.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316953365|gb|ADU72836.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 314 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 129/241 (53%), Gaps = 37/241 (15%) Query: 2 KYEWFNLIIDSFPQLLY-----AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 ++ W D+ Q L+ A + T + S I +++G IA++R+ + ++S Sbjct: 60 RFHW-----DAVAQYLFDDSIIAGLYTTAWLTLASMAIGIVLGTLIALMRMS-KNPVLST 113 Query: 57 IMHFYVWIFRGTPLLVQLFVIF--------------YGLPHIGIVFDS------FVAIII 96 + Y+W+FRGTPLLVQL F +G P +G FD+ + A ++ Sbjct: 114 VASAYLWLFRGTPLLVQLIFWFNLSALYPQITLGFPFG-PSLG-AFDANKVITVYAAALL 171 Query: 97 SLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF 156 L LN AY+SEI+RS + ++P GQ +A+ A+G++ + + +ILPQ + P ++ Sbjct: 172 GLGLNEGAYMSEIVRSGLSAVPNGQREAAEALGMSSFRVMFRVILPQAMRIIIPPTGNQL 231 Query: 157 ISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 I +LK+TS+ S I + ++ +AQ I + +Q PL+I L YL+LT+ ++Q +E Sbjct: 232 IGMLKTTSLVSVIAMQDLLYSAQLIYTNNFQTIPLLIVASL--WYLVLTTVLSVLQHYLE 289 Query: 215 S 215 Sbjct: 290 K 290 >gi|296535859|ref|ZP_06898018.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296263809|gb|EFH10275.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 220 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 16/207 (7%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTIIS 55 Y W ++ S+ L + VTL ++ L +G F ++R+ +FS Sbjct: 2 YNWDFAVVWSYRWLFVNGLWVTLAFTAAIVLLGLAVGLFSGLLRLSRLAPLRWFSQA--- 58 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 YV +FR TP+LVQL +Y LP + GI + A +++L+L A+ SEI+R I Sbjct: 59 -----YVELFRCTPILVQLVWFYYALPILTGIQMSATTAGVLALSLYGGAFYSEIVRGGI 113 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 SI GQ +A+ A+G+T Q++R I+LPQ + PL ++ I LK+TS+ S + +P++ Sbjct: 114 ASIESGQSEAALALGMTPAQSMRRIVLPQAMKRMVPPLMNQSIIQLKNTSLVSVLAVPDL 173 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLI 201 Q +Y+PL IY +A +Y + Sbjct: 174 LYQGQAAAHDSYRPLEIYTVVAIIYFV 200 >gi|290956092|ref|YP_003487274.1| permease of ABC transporter [Streptomyces scabiei 87.22] gi|260645618|emb|CBG68709.1| putative permease component of ABC transporter [Streptomyces scabiei 87.22] Length = 291 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 63/171 (36%), Positives = 101/171 (59%), Gaps = 12/171 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGI------------VFDSFVAIIISLTLNFSAYISE 108 YVW+ RGTPLLVQL +++ GL G+ + A +++L +N +AY++E Sbjct: 75 YVWLIRGTPLLVQLVLVYNGLAAAGVYRFTDVQVGGLVLLGVVQAAVLTLAVNEAAYMAE 134 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 IIR+++ +I +GQ +A+ A+G+T T+R ++LPQ + PL +EF ++KSTS+ S Sbjct: 135 IIRAALDAIDRGQTEAAQALGMTPSLTMRVVLLPQALRIVVPPLGNEFNLMMKSTSLLSV 194 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 I + E+F TAQ I S T++ I+ A YL LT+ +Q IE + Sbjct: 195 IGLQEMFLTAQSINSATFKTFEIFLVAACYYLALTTVWSFVQRFIERRLAD 245 >gi|251792008|ref|YP_003006728.1| arginine transporter permease subunit ArtQ [Aggregatibacter aphrophilus NJ8700] gi|247533395|gb|ACS96641.1| histidine transport system permease protein HisQ [Aggregatibacter aphrophilus NJ8700] Length = 221 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 66/221 (29%), Positives = 122/221 (55%), Gaps = 10/221 (4%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F L++ A ++TL +A S V L++ AV+ ++ ++ M V + RG P + Sbjct: 4 DFLSLMFTAALMTLGLAVCSLVAGLLLSMLFAVLE---ANRVVGKPMAVLVALLRGLPEI 60 Query: 72 VQLFVIFYGLPHI-----G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + + ++++G + G I F +F + +L+L F+AY S+ +R +I +IPKGQW++ Sbjct: 61 LVVLLVYFGSSEVVEMITGEYIEFGAFGCGVFALSLIFAAYASQTLRGAIQAIPKGQWES 120 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+GL++ T HII+PQ + LS++++ +LK T++ S I + ++ + AQ I + Sbjct: 121 GAALGLSKGYTFLHIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLMRQAQLINTN 180 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 T+QP Y A +YL++T + K+E T+ V Sbjct: 181 THQPFTWYGIAALIYLVVTLVSQVGIRKLELRFTRFEREVK 221 >gi|242279192|ref|YP_002991321.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242122086|gb|ACS79782.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 337 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 125/220 (56%), Gaps = 18/220 (8%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P ++ + VTL ++ I+ V ++I+G F + RI + + L Y+ + RGTPLLVQ Sbjct: 123 PGVILDGLFVTLKVSAIAIVFAIILGLFTGLARIS-QNPALKLSAITYIELIRGTPLLVQ 181 Query: 74 LFVIFYGLPHIGIVFDSFVAI------------IISLTLNFSAYISEIIRSSIISIPKGQ 121 +F+ ++ L G + ++ +A I SL + AY++EI+R+ I S+ +GQ Sbjct: 182 MFIWYFVL---GTLVNNMLAKYDISQIPPLWFGIASLAIFAGAYVAEIVRAGIQSVHRGQ 238 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++G+++ ++HIILPQ PL+ +FIS++K +S+ I I E+ + + Sbjct: 239 MEAARSLGMSKYYAMKHIILPQAFRRILPPLAGQFISMIKDSSLLGVIAIRELTKGTREA 298 Query: 182 VSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQH 220 VST+ QP ++ A +YL+LT +F +Q +E + Q Sbjct: 299 VSTSLQPFELWFLCALLYLVLTFAFSMFVQY-LEKKMVQR 337 >gi|19552549|ref|NP_600551.1| ABC-type transporter, permease component [Corynebacterium glutamicum ATCC 13032] gi|62390213|ref|YP_225615.1| ABC-type amino acid transport system, permease component [Corynebacterium glutamicum ATCC 13032] gi|21324099|dbj|BAB98724.1| ABC-type transporter, permease components [Corynebacterium glutamicum ATCC 13032] gi|41325550|emb|CAF21339.1| ABC-type amino acid transport system, permease component [Corynebacterium glutamicum ATCC 13032] Length = 316 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 122/216 (56%), Gaps = 27/216 (12%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A + T+ + +S ++ +++G +AV+R+ + ++ + Y+WIFRGTP+ VQL +F+ Sbjct: 69 AALHTIALTLLSMILGVVLGAILAVMRMS-GNPVMQGVAWLYLWIFRGTPIYVQL--VFW 125 Query: 80 GLPHIGIVFDS-----------------FVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 GL +G ++ S F+ +I L LN +AY++EI+RS I ++P+GQ Sbjct: 126 GL--LGSLYQSINLGFAEIDLQSLLSNMFLLAVIGLGLNEAAYMAEIVRSGIQAVPEGQM 183 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP---EIFQTAQ 179 +AS A+G+ T+R ILPQ + P +E IS+LK+TS+ + IP E++ + Sbjct: 184 EASKALGMNWSMTMRRTILPQAMRIIIPPTGNELISMLKTTSL--VVAIPYSLELYGRSM 241 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 I + ++P+ + A YL++TS + Q +E Sbjct: 242 DIAYSLFEPVPMLLVAASWYLVITSILMVGQYYLEK 277 >gi|227505029|ref|ZP_03935078.1| ABC superfamily ATP binding cassette transporter [Corynebacterium striatum ATCC 6940] gi|227198393|gb|EEI78441.1| ABC superfamily ATP binding cassette transporter [Corynebacterium striatum ATCC 6940] Length = 326 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 122/209 (58%), Gaps = 23/209 (11%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP- 82 TL I ++ +I ++ G +AV+R+ + ++ + ++WIFRGTP+ VQL +F+GL Sbjct: 85 TLAITALAMIIGVVGGAILAVMRMS-PNPVLQGVAWLFLWIFRGTPVYVQL--VFWGLLS 141 Query: 83 ------HIG--------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 ++G ++ ++F+ ++ L LN +AY++EI+RS I ++P+GQ +AS A+ Sbjct: 142 ALYQSINLGFTEISLASVLTNAFLLSVLGLGLNEAAYMAEIVRSGISAVPEGQKEASKAL 201 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP---EIFQTAQRIVSTT 185 G+ T+R +LPQ + P +EFIS+LK++S+ + +P EIF A I + Sbjct: 202 GMGWWMTMRRTVLPQAMRIIIPPTGNEFISLLKTSSL--VVAVPYTYEIFGRATDISAAL 259 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIE 214 ++P+ + A YL++TS I Q +E Sbjct: 260 FEPIPLLLVAATWYLVITSLLMIAQYFLE 288 >gi|134102703|ref|YP_001108364.1| amino acid ABC transporter, permease protein [Saccharopolyspora erythraea NRRL 2338] gi|133915326|emb|CAM05439.1| amino acid ABC transporter, permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 220 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 113/206 (54%), Gaps = 9/206 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLI 57 MK++W + + FP LL A+ + A + ++++L++G IA++R + + + L+ Sbjct: 1 MKWDW-DYAAEIFPMLL-GALWTAIQAAVLGYLLALVLGLVIALLRRSRVLWISVPVGLV 58 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + F R TPL+VQLF +F+ LP +GI + ++ L L+++ Y++E+ R+ I + Sbjct: 59 VEF----VRSTPLIVQLFFLFFVLPEVGIQMSPLLTGVVGLGLHYATYVAEVYRAGIDGV 114 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQW+A+ A+ L ++ +ILPQ I S L + I++ K IT+ E F Sbjct: 115 PAGQWEAATALNLPTRRVWTDVILPQAIPRSIPALGNYLIALFKDVPQLVAITVLEPFTV 174 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + T++P +YL +T Sbjct: 175 AREVTADTFRPFEAITLAGLLYLAVT 200 >gi|311279324|ref|YP_003941555.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] gi|308748519|gb|ADO48271.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] Length = 243 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 127/219 (57%), Gaps = 11/219 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D+F +L AA+ VTL + +FV I+ + +R+ ++S Y+ +FRG+PL Sbjct: 10 DTFLKL-SAALPVTLGLFISAFVCGGILAVGVLAMRMS-RWPLLSGFAKGYILVFRGSPL 67 Query: 71 LVQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 L+QLF+I+YGL G++ SF + +++L+L +AY +EI+R +++++P GQ Sbjct: 68 LIQLFLIYYGLGQFGVIRHSFLWPLLREPFICAVLALSLCTAAYTAEILRGALLAVPPGQ 127 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A A G++R +R II P + + S+E I ++KST++AS +T+ ++ AQ+I Sbjct: 128 IEAGQACGMSRFLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQI 187 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + TY+ + ++ A +YL+L + +E +T H Sbjct: 188 IQRTYRTMEVFLCAAAIYLLLNFIIVQLYALLERKLTPH 226 >gi|90414856|ref|ZP_01222822.1| putative amino acid ABC transporter, permease protein [Photobacterium profundum 3TCK] gi|90324034|gb|EAS40625.1| putative amino acid ABC transporter, permease protein [Photobacterium profundum 3TCK] Length = 275 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 123/204 (60%), Gaps = 6/204 (2%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL-IMHF 60 +Y WF + FP L + VTL I+ +S + +LIIG A++R+ S +I+ + Sbjct: 57 QYLWFIEDGEWFPAELLEGLFVTLKISTVSLIFTLIIGLVTALLRL--SGSIVGRGLARG 114 Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQ++++++ P +G+ + F +++L+L AY +EI R+ + +IPK Sbjct: 115 YIELIRNTPLLVQIYLLYFVFGPVLGL--ERFTTAVLALSLFQGAYTAEIFRAGLNNIPK 172 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A ++GL+ R +ILPQ I PL++E +S++K++S+ S + I ++ + Sbjct: 173 GQFEACSSLGLSAIDGYRFVILPQMIRRILPPLTNETVSLVKNSSIVSIMAIFDLTTEGR 232 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 IV+ T P ++ +A +YL +T Sbjct: 233 NIVADTAMPFEVWFTVAGIYLCVT 256 >gi|54023858|ref|YP_118100.1| putative ABC transporter permease [Nocardia farcinica IFM 10152] gi|54015366|dbj|BAD56736.1| putative ABC transporter permease [Nocardia farcinica IFM 10152] Length = 308 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 126/233 (54%), Gaps = 24/233 (10%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y+W F + + +VTL + ++ I++++G +AV+R+ + ++ Y+ Sbjct: 50 YQWGTYGRYLFDTRILSGALVTLELTVLAMAIAIVLGTVLAVMRLS-PNPVLRSTAWVYL 108 Query: 63 WIFRGTPLLVQLFVIFYGL-P------HIGIVFD-------------SFVAIIISLTLNF 102 WIFRGTP+ VQL +F+GL P +G+ F +F +I L LN Sbjct: 109 WIFRGTPVFVQL--VFWGLFPSLYRQIDLGVPFGPQFFHLDVQGLQAAFAFAVIGLGLNE 166 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY++EI+R+ I S+ +GQ +AS A+G++ QT+R +LPQ + P +E I +LK+ Sbjct: 167 AAYMAEIVRAGINSVGEGQREASIALGMSWAQTMRRTVLPQAMRVIIPPTGNELIGMLKT 226 Query: 163 TSVASTITIP-EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+ + I + +++ A+ I +QP+ + A YL +TS + Q +E Sbjct: 227 TSLVTAIPLSTDLYGRARDIYGVNFQPIPLLLVTATWYLAITSVLMVGQYYLE 279 >gi|116495482|ref|YP_807216.1| ABC-type amino acid transport system, permease component [Lactobacillus casei ATCC 334] gi|227534091|ref|ZP_03964140.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|301066995|ref|YP_003789018.1| amino acid ABC transporter permease [Lactobacillus casei str. Zhang] gi|116105632|gb|ABJ70774.1| amino acid ABC transporter membrane protein 2, PAAT family [Lactobacillus casei ATCC 334] gi|227188272|gb|EEI68339.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|300439402|gb|ADK19168.1| ABC-type amino acid transport system, permease component [Lactobacillus casei str. Zhang] Length = 220 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 115/202 (56%), Gaps = 8/202 (3%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W NL + L + VTL ++ +S S I+G + + R + S I+ F + Sbjct: 8 YSWINL------RYLLQGLGVTLEVSIVSIFFSFILGVILGLAR-YVKIKYFSAIVGFVI 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + R PLL+ LF ++ LP IGI + A II++++ SA ++EI+RS I ++P+GQ Sbjct: 61 DLIRNLPLLLILFFTYFALPDIGIRLNVVAAAIIAMSIFESAMLAEIVRSGINAVPRGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ + GLT Q +R+II+PQ + P+ S+FIS++K TS+A+ I +PE AQ I Sbjct: 121 EAARSNGLTFYQAMRYIIMPQALKKMIPPIVSQFISLVKDTSLATIILLPEATYHAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLILT 203 +I ++ LA +Y ++ Sbjct: 181 GQNINYMIPMFVALAVMYFVVN 202 >gi|289434115|ref|YP_003463987.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170359|emb|CBH26899.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313634164|gb|EFS00821.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria seeligeri FSL N1-067] gi|313638787|gb|EFS03871.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria seeligeri FSL S4-171] Length = 480 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 120/210 (57%), Gaps = 3/210 (1%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 S+P LL + +T+ +A +S +I+ IIG +++ S I+ I YV IFRGTPL+ Sbjct: 273 SWPALL-DGMWLTIKLAVVSLIIAFIIGITFGFMKVSNS-KILRGIATVYVDIFRGTPLI 330 Query: 72 VQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 VQ F ++G+P + F+A +I+L+LN AY+ EI+R I S+ KGQ +A+ ++GL Sbjct: 331 VQAFFFYFGIPAALDFRMPVFLAGVIALSLNAGAYMVEIVRGGIQSVDKGQMEAARSLGL 390 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 K+ + ++LPQ I ++F+ LK TS+ S I + E+ Q+ + I++ T++ Sbjct: 391 PHKKAMLKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQSGKIIMARTFESTW 450 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + + +YLI+ + + ++E + Sbjct: 451 TWLIIGIMYLIVITILTKVSDRLERRLRND 480 >gi|91789329|ref|YP_550281.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91698554|gb|ABE45383.1| amino acid ABC transporter membrane protein 2, PAAT family [Polaromonas sp. JS666] Length = 216 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 50/142 (35%), Positives = 92/142 (64%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV +F+GTPLL+QLF+ ++GL GI ++VA ++LTL SA+++EI R + +IPKG Sbjct: 56 YVQLFQGTPLLMQLFLAYFGLALFGIKTSAWVAASVALTLYTSAFLTEIWRGCVAAIPKG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A ++ L+ ++ ++H+++PQ + + P + ++K T++AS I E+ + Sbjct: 116 QWEAGQSLALSFRELLQHVVVPQALKIAIPPTVGFLVQVVKGTALASVIGFIELTKAGTM 175 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 I + T++P ++Y +A +Y L Sbjct: 176 ITNATFKPFVVYSCVALLYFAL 197 >gi|317050659|ref|YP_004111775.1| polar amino acid ABC transporter inner membrane subunit [Desulfurispirillum indicum S5] gi|316945743|gb|ADU65219.1| polar amino acid ABC transporter, inner membrane subunit [Desulfurispirillum indicum S5] Length = 260 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 116/210 (55%), Gaps = 15/210 (7%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR-------IFFSDTI 53 ++YEW ++ + L+ ++T+ I+ IS ++SLI+G +A + TI Sbjct: 41 LQYEWHWQVLYQYRHKLWQGWLMTVMISAISLLMSLIVGLLLAAAQRSPVILVCQLGRTI 100 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + +I RGTPLLVQ+ + FY + + + +VA ++ L L AYISEIIR+ Sbjct: 101 VEVI--------RGTPLLVQILIFFYVVADAFGLQNRYVAGVLILALFSGAYISEIIRAG 152 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + SI + Q D++ ++G T Q RH+I+PQ + PL+ +F S++K +S+ S I I E Sbjct: 153 VESISQSQIDSARSLGFTPWQIYRHVIIPQVLRRILPPLAGQFASLIKDSSLLSIIAISE 212 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 AQ + + T+ L Y LA YLILT Sbjct: 213 FTLNAQEVNAFTFSTLESYLPLALGYLILT 242 >gi|323172273|gb|EFZ57911.1| glutamine transport system permease protein glnP [Escherichia coli LT-68] Length = 219 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 124/219 (56%), Gaps = 5/219 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P L+ A +TL I+ + L+IG R F I + + Sbjct: 1 MQFDW-SAIWPAIPLLIEGA-KMTLWISVLGLAGGLVIGLLAGFARTF-GGWIANHVALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R +TIR++ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 Q I+++ ++ L I+ +A YLI+T I ++E + Sbjct: 178 QEIIASNFRALEIWSAVAVFYLIITLVLSFILRRLERRM 216 >gi|209515404|ref|ZP_03264270.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209504124|gb|EEA04114.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 218 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 68/218 (31%), Positives = 124/218 (56%), Gaps = 5/218 (2%) Query: 4 EWFNLIIDSFPQLLYAAIV-VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 W + I D P LL A++ + + + C+ ++S ++G A++++ ++ + + Sbjct: 2 RWQD-IADFVPILLQGAVMSIIITLGCL--LLSTVLGLTWALLKMSRYPHVVRGVSAM-I 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RG P++V LF I++ LP I I + A II L +S YI+EI R+ I ++ GQ+ Sbjct: 58 NVVRGLPMIVLLFYIYFVLPDIHIQVTALQASIIGLGFGYSTYIAEIFRAGIEAVDPGQY 117 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ +IG+ R +T+ +ILPQ I + P S+ + +LK +S+ASTIT+ E+ + Q I Sbjct: 118 EAAQSIGMGRVKTMVRVILPQAIKVALPPYSNTLVMMLKDSSLASTITVAEMTREGQLIA 177 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S+T+Q L +Y +A YL ++ + +E +H Sbjct: 178 SSTFQNLTVYTLVALGYLAMSLPLMSMTRNLERRFGRH 215 >gi|126667700|ref|ZP_01738668.1| amino acid ABC transporter, permease protein [Marinobacter sp. ELB17] gi|126627803|gb|EAZ98432.1| amino acid ABC transporter, permease protein [Marinobacter sp. ELB17] Length = 218 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 114/205 (55%), Gaps = 18/205 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YV 62 FNL+++ P L+ AA V T+ ++ S + GFF+A +F + I F Y+ Sbjct: 3 FNLMVEVTPLLIEAAWV-TIDVSARS----MFFGFFVACGLVFLQSFRFAPIRWFARGYI 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTP VQL ++FYG P IG+ D + N AY+SE IR SI S+ GQ Sbjct: 58 SVVRGTPYFVQLLLVFYGGPSIGVRLDPITCGVFVGAFNIGAYMSEAIRGSIESVDSGQT 117 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL-----KSTSVASTITIPEIFQT 177 +A+ ++G + QT+ I+LPQ A PL + +L K++S+ S I++ E+ Sbjct: 118 EAARSVGFGKVQTMVSIVLPQ-----AAPLMIRSVGVLAIVLVKNSSLVSIISVVELTYQ 172 Query: 178 AQRIVSTTYQPLIIYCELAFVYLIL 202 AQR++ +TY+PL I+ A +Y+++ Sbjct: 173 AQRLIGSTYKPLEIFTLSALMYIVI 197 >gi|317133175|ref|YP_004092489.1| polar amino acid ABC transporter, inner membrane subunit [Ethanoligenens harbinense YUAN-3] gi|315471154|gb|ADU27758.1| polar amino acid ABC transporter, inner membrane subunit [Ethanoligenens harbinense YUAN-3] Length = 228 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 64/156 (41%), Positives = 94/156 (60%), Gaps = 16/156 (10%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGI------VFDS----FVAIIISLTLNFSAYISEII 110 YV RGTPL++QLF+IFYGLP IGI FD+ F++ +I++ LN SAY+ EI Sbjct: 56 YVEFIRGTPLMIQLFIIFYGLPMIGISIPSLTFFDTDISRFISGMIAMALNSSAYVCEIF 115 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 RS I S+ GQ +AS ++G T+R I+LPQ + L +E ++++K +SV S I Sbjct: 116 RSGIQSVDDGQVEASRSLGFNYSSTMRFIVLPQALRNILPALGNELVTVIKESSVISVIG 175 Query: 171 IPEIFQTAQRIVSTTYQ---PLIIYCELAFVYLILT 203 + E+ + STTY+ PLII A +Y ++T Sbjct: 176 VQELMYNTTIVRSTTYKSFSPLII---TALIYFVIT 208 >gi|254453112|ref|ZP_05066549.1| ABC transporter, membrane spanning protein [Octadecabacter antarcticus 238] gi|198267518|gb|EDY91788.1| ABC transporter, membrane spanning protein [Octadecabacter antarcticus 238] Length = 215 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 71/195 (36%), Positives = 117/195 (60%), Gaps = 7/195 (3%) Query: 10 IDSF--PQL--LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +D F P+L L + TL + ISF+ +IG IA+ R+ S I++ Y+ +F Sbjct: 1 MDKFGSPELFFLLQGLKWTLLLTLISFIGGGVIGLAIALARVS-SLRILNWSAAAYIAVF 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 +GTPLL+QLFVIFYGL + D++VA+ + T + SA++ +I R +I S+P+GQ +AS Sbjct: 60 QGTPLLMQLFVIFYGLALMEFNVDAWVAVSFAFTAHASAFLGDIWRGTIQSLPRGQTEAS 119 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEF-ISILKSTSVASTITIPEIFQTAQRIVST 184 A+G+ +R IILPQ I S +P + F + + K TS+A+ + E+ + Q + + Sbjct: 120 NALGIGYISRMRDIILPQAIKIS-LPATIGFAVQLTKGTSLAAIVGFVELARAGQIVSNL 178 Query: 185 TYQPLIIYCELAFVY 199 +QPL++Y + +Y Sbjct: 179 IFQPLLVYGIVGVIY 193 >gi|20502717|gb|AAM22578.1|AF375657_15 AotM [Aeromonas hydrophila] Length = 230 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 122/224 (54%), Gaps = 11/224 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I+ +P + + T+ + S ++ L++ + ++R + +I + Y++ F Sbjct: 3 FSIILSEWPTY-WQGLYTTVLLVAASLILGLMLAVPLGILRNS-RNWLIKGPIWAYIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHI-----GIVFDSFVAI----IISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+I+YG + +D F +++ TLN AY +EI+R ++++ Sbjct: 61 RGTPLLVQLFIIYYGAAQWEWLKNSVAWDLFAEAWFCALLAFTLNTGAYTAEIVRGAVLN 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +PKGQ +A+ A G+TR QT+ IILP + + S+E I +L+ ++VA ITI ++ Sbjct: 121 MPKGQIEAANAFGMTRWQTLTRIILPNSFRRALPAYSNEVIFMLQGSAVAGIITIVDLTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 A+ I S Y P + +Y++LT + K E+ H Sbjct: 181 AARIINSRYYSPFEAFLTAGLLYMLLTFVIVWLFKKWEARWHAH 224 >gi|218676308|ref|YP_002395127.1| ABC transporter: transmembrane protein [Vibrio splendidus LGP32] gi|218324576|emb|CAV26094.1| ABC transporter: transmembrane protein [Vibrio splendidus LGP32] Length = 266 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/195 (34%), Positives = 121/195 (62%), Gaps = 6/195 (3%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF-YVWIFRGTP 69 + +P L ++VT+ I+ IS V +LIIG A++R S++++ + YV + R TP Sbjct: 55 EWWPAELVEGLLVTINISLISLVATLIIGLTTALLR--NSNSVVGRTLATSYVELIRNTP 112 Query: 70 LLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 LLVQ++++++ P +G+ D F +++L L AY +EI R+ + I +GQ++A+ ++ Sbjct: 113 LLVQIYLLYFVFGPVLGL--DRFSTAVLALALFQGAYTAEIFRAGLNGIARGQFEAAQSL 170 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL++ T +ILPQ + + PL++E IS++K++S+ S + I ++ A+ IVS T P Sbjct: 171 GLSKTYTYWDVILPQVVQRTLPPLTNEVISLIKNSSIVSVMAIFDLTTEARNIVSETAMP 230 Query: 189 LIIYCELAFVYLILT 203 I+ +A +YL LT Sbjct: 231 FEIWFSVAIIYLALT 245 >gi|239826928|ref|YP_002949552.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. WCH70] gi|239807221|gb|ACS24286.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. WCH70] Length = 217 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 90/143 (62%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV R PL++ +FV F G P IGI FDSF A + L + +A+I+E+IRS I+++PKG Sbjct: 57 YVEFIRNIPLILIVFVFFVGFPAIGIRFDSFTAGTLGLMVYTAAFIAEVIRSGILAVPKG 116 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ + GLT QT+R+IILPQ I PL ++FI+++K++SV I ++ Sbjct: 117 QMEAARSSGLTYLQTMRYIILPQAIKIVIPPLGNQFINLVKNSSVLGVIAGLDLMYFGDL 176 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I S T+ +Y +A YL+LT Sbjct: 177 ISSETFVTFDVYIFVALFYLVLT 199 >gi|295699311|ref|YP_003607204.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1002] gi|295438524|gb|ADG17693.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 220 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 108/202 (53%), Gaps = 11/202 (5%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q + A + TL I L+IGF IAV+++F + + + Y+ + RGTP LVQL Sbjct: 14 QPIAAGLATTLGSWAAGVAIGLVIGFLIAVLQLFCGRWLRA-ALRVYIELLRGTPFLVQL 72 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F+++YG P IG+ + A I+ L L SAY +E RS S+PKG +A+ +GLTR Q Sbjct: 73 FLLYYGGPSIGLTLEPMTAGIVGLGLYGSAYFAEAFRSGFQSVPKGHLEAASCLGLTRWQ 132 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 I I PQ + L++ I + K T+V S +T+PE+ I S T+ Sbjct: 133 AIVRIQAPQMLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATF-------- 184 Query: 195 LAFVY-LILTSFCYIIQIKIES 215 AFV L++ CY+ +++ S Sbjct: 185 -AFVETLLVLCVCYLALVELTS 205 >gi|238762252|ref|ZP_04623224.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638] gi|238699599|gb|EEP92344.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638] Length = 217 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 61/190 (32%), Positives = 104/190 (54%), Gaps = 2/190 (1%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P LL ++VTL + F+++ ++G +AV+ + I+ + YV FR TPLLVQ Sbjct: 13 PDLL-PGLLVTLEVVVAGFLLATVLGMVVAVL-LQLQSPFITPVCQAYVTFFRNTPLLVQ 70 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 L+ +F+ LP G+ + ++ + L + AYI+E R +I +P+GQW+A+ A+ Sbjct: 71 LYFLFFALPLSGLALPAMATGMVGMGLYYGAYIAEAFRGAINGVPQGQWEAARALDFPPL 130 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 II PQ L + I + K T + + ITIPE+FQ A++I TY+ Y Sbjct: 131 TRWTRIIFPQAFKPMLPVLGNYLIGMFKETPLLAVITIPELFQAAKQIAGLTYRYNEPYT 190 Query: 194 ELAFVYLILT 203 +A ++L+++ Sbjct: 191 LMALLFLLIS 200 >gi|32266981|ref|NP_861013.1| putative ABC-type amino-acid transporter permease protein [Helicobacter hepaticus ATCC 51449] gi|32263033|gb|AAP78079.1| putative ABC-type amino-acid transporter permease protein [Helicobacter hepaticus ATCC 51449] Length = 249 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 109/187 (58%), Gaps = 10/187 (5%) Query: 24 TLPIACISFVISLI---IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG 80 TL ++ ++ +I+LI IG +A +I TI+ YV IF+ TPL++Q+F +++ Sbjct: 50 TLSVSILALLIALIFGTIGGVMATSKI----TILRAYTRMYVEIFQNTPLVIQIFFLYFA 105 Query: 81 LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 LP +GI D F ++ + AY+SE++RS I+++PKGQ++AS + G T Q +R+II Sbjct: 106 LPPLGIHLDVFSVGVLGVGAYHGAYVSEVVRSGILAVPKGQFEASASQGFTYTQQMRYII 165 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LPQTI P++++ ++++K+TSV I EI A T Y AF+Y Sbjct: 166 LPQTIKIILPPITNQVVNLIKNTSVLLIIAGGEIMYVADSYAGDTSNYAPAYLFAAFLYF 225 Query: 201 ILTSFCY 207 I+ CY Sbjct: 226 IV---CY 229 >gi|34556717|ref|NP_906532.1| ABC transporter permease [Wolinella succinogenes DSM 1740] gi|34482431|emb|CAE09432.1| PERMEASE OF ABC TRANSPORTER [Wolinella succinogenes] Length = 321 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 121/198 (61%), Gaps = 2/198 (1%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +T+ I+ IS VI+ IG +A+++I + + I Y+ + RGTPLLVQ+F+ ++ + Sbjct: 122 MTIKISLISGVIAFFIGAILALMKISKAQ-VFRDIATVYIEVIRGTPLLVQIFIFYFIIA 180 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 I DSF A ISL + + AYI+E++R +I SI KGQ +A+ ++G+ QT+ II+P Sbjct: 181 TI-FEIDSFYAGAISLAIFYGAYIAEVLRGAIQSIDKGQQEAALSLGMNYFQTMTLIIIP 239 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + S L+ E I+++K +S+ S I++ ++ + + +V+ T+ P + +A +Y + Sbjct: 240 QALKRSLPSLTGEMIALIKDSSLVSVISVTDLTKVGREMVANTFSPFETWIVVAIMYFAI 299 Query: 203 TSFCYIIQIKIESSVTQH 220 TS ++ ++E ++ + Sbjct: 300 TSSLSLLAHRLEDNMKKR 317 >gi|313890948|ref|ZP_07824570.1| ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] gi|313120672|gb|EFR43789.1| ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] Length = 724 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 125/216 (57%), Gaps = 9/216 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F L+ +++ QLL A + TL + ISF I++IIG ++ + S + +I +V + Sbjct: 507 FGLLSNNYKQLL-AGLGTTLSLTLISFAIAIIIGIIFGMMAVAPSKQL-RIISSIFVDVV 564 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RG PL++ IF+G+P++ + F+A I+L+LN AYI+EI+R I +IP Sbjct: 565 RGIPLMIVAAFIFWGIPNLIESMTGHQSPINDFLAATIALSLNGGAYIAEIVRGGIEAIP 624 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS ++G+ K T+R +ILPQ + ++F+ LK T++ S I + E+FQT Sbjct: 625 AGQMEASRSLGIPYKLTMRKVILPQAVKVMLPNFINQFVISLKDTTIVSAIGLVELFQTG 684 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + I++ YQ +Y LA +YLI+ + + ++E Sbjct: 685 KIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLE 720 >gi|241766695|ref|ZP_04764536.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] gi|241362978|gb|EER58663.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] Length = 216 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 52/142 (36%), Positives = 87/142 (61%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV +F+GTPLL+QLF+ ++GL +G+ +A + L L SAY+ EI R + ++P+G Sbjct: 56 YVQVFQGTPLLMQLFLTYFGLAMVGVDTSPLLAASVCLILYSSAYLCEIWRGCVEAVPRG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+AS ++ + + +RH+ILPQ + P + + I+K T++ S I EI + Q Sbjct: 116 QWEASASLAMGFTEQLRHVILPQALRMGIAPTAGFSVQIIKGTALTSVIGFIEITKAGQL 175 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 I + T++P +IY +A +Y L Sbjct: 176 IANATFEPFLIYGCVAALYFAL 197 >gi|241204560|ref|YP_002975656.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858450|gb|ACS56117.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 224 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 119/207 (57%), Gaps = 5/207 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++ + S+P L + +T+ ++ IS V+ +IGF + ++R S ++S + Sbjct: 1 MIWQQLQSLAGSYP-LALRGLGMTVALSLISLVLGTLIGFCLGILRTGGSR-LLSAAIGS 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +V + RGTP LVQ+F+IF+ LP GI D+F A II+LT + +I EI+ + I ++P G Sbjct: 59 WVDLIRGTPFLVQIFLIFFILPEFGIELDAFSAGIIALTNLAACFICEIVAAGIRAVPTG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A GL+R Q +R ++LPQ + PL +++ ++K +SV S I + ++ + Sbjct: 119 QIEAALASGLSRWQRMRQVVLPQAMRIVLPPLVGQYVLLIKDSSVVSAIGLTDLTRVGWL 178 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCY 207 +V L+++ + Y I+ CY Sbjct: 179 VVQRVPNGLLVFFLVGVGYFIV---CY 202 >gi|239618043|ref|YP_002941365.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga olearia TBF 19.5.1] gi|239506874|gb|ACR80361.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga olearia TBF 19.5.1] Length = 244 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 65/212 (30%), Positives = 120/212 (56%), Gaps = 6/212 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFR 66 +I + +L + ++ TL ++ + +SL++GF IA+ R + I+ L + YVW FR Sbjct: 35 VILKYRRLFFDGLMTTLRLSVTALGLSLLVGFIIALFR---TSRILVLEELGMIYVWFFR 91 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PLLV + +I+YG+ + + + F A +ISL L AY+ EI R+ I ++P+G+ +A Sbjct: 92 NMPLLVIILLIYYGIGSV-VAINRFWAGVISLALFEGAYVGEIFRAGIEAVPRGEIEAGE 150 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G+ + Q + II P+ + S PL + +S++K +S+ S I + ++ A+++ + T Sbjct: 151 ALGMYKYQIMGSIIFPRALRISIPPLVGQMVSLVKDSSLVSVIALGDLTMRARQVGTQTL 210 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 L Y LA YL +TS ++ +E + Sbjct: 211 ASLEAYLVLAGFYLAITSLLSLVGRYLERRLA 242 >gi|160936156|ref|ZP_02083529.1| hypothetical protein CLOBOL_01052 [Clostridium bolteae ATCC BAA-613] gi|158440966|gb|EDP18690.1| hypothetical protein CLOBOL_01052 [Clostridium bolteae ATCC BAA-613] Length = 233 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 70/221 (31%), Positives = 123/221 (55%), Gaps = 7/221 (3%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHF 60 + N + D+ + L + TL I + ++ +++GF + +IR + T +++ I Sbjct: 13 YLNFVSDNRWKYLTEGLKTTLIITFFACLMGIVLGFLVGMIRSTYEKTHKLKVLNAICKV 72 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + RGTP++VQL +I++ + + D + I++ +N AY++EI RS I+SI G Sbjct: 73 YLTVIRGTPVVVQLLIIYF-VVFGSVRVDKVIVAILAFGVNSGAYVAEIFRSGIMSIDPG 131 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A ++G QT+ +II+PQ T L +EFIS+LK TSV+ I I ++ + Sbjct: 132 QMEAGRSLGFNYAQTMWYIIMPQAFKTVLPTLCNEFISLLKETSVSGYIAIQDLTKGGDI 191 Query: 181 IVSTTYQPLIIYCELAFVYLILTS-FCYIIQIKIESSVTQH 220 I S TY + +A +YLI+ F +IQI +E + Q+ Sbjct: 192 IRSRTYSAFMPLIAVAIIYLIIVMIFTKLIQI-LERRLRQN 231 >gi|86144264|ref|ZP_01062596.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222] gi|85837163|gb|EAQ55275.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222] Length = 265 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/195 (34%), Positives = 121/195 (62%), Gaps = 6/195 (3%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF-YVWIFRGTP 69 + +P L ++VT+ I+ IS V +LIIG A++R S++++ + YV + R TP Sbjct: 54 EWWPAELVEGLLVTINISLISLVATLIIGLTTALLR--NSNSVVGRTLATSYVELIRNTP 111 Query: 70 LLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 LLVQ++++++ P +G+ D F +++L L AY +EI R+ + I +GQ++A+ ++ Sbjct: 112 LLVQIYLLYFVFGPVLGL--DRFSTAVLALALFQGAYTAEIFRAGLNGIARGQFEAAQSL 169 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL++ T +ILPQ + + PL++E IS++K++S+ S + I ++ A+ IVS T P Sbjct: 170 GLSKTYTYWDVILPQVVQRTLPPLTNEVISLIKNSSIVSVMAIFDLTTEARNIVSETAMP 229 Query: 189 LIIYCELAFVYLILT 203 I+ +A +YL LT Sbjct: 230 FEIWFSVAIIYLALT 244 >gi|261867468|ref|YP_003255390.1| arginine transporter permease subunit ArtQ [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412800|gb|ACX82171.1| histidine transport system permease protein HisQ [Aggregatibacter actinomycetemcomitans D11S-1] Length = 220 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 122/216 (56%), Gaps = 10/216 (4%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L++ A ++TL +A S V+ LI+G AV+ ++ + M +V + RG P ++ + Sbjct: 8 LMFTAALMTLGLAVCSLVLGLILGMLFAVLE---ANRFVGKPMAVFVALLRGLPEILVVL 64 Query: 76 VIFYGLPHI-----G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 ++++G + G I F +F + +L+L F+AY S+ +R +I +I KGQW++ A+ Sbjct: 65 LVYFGSSEVVEMITGDYIEFGAFGCGVFALSLIFAAYASQTLRGAIQAIAKGQWESGAAL 124 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL++ T HI++PQ + LS++++ +LK T++ S I + ++ + AQ I + T+QP Sbjct: 125 GLSKGYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLMRQAQLINTNTHQP 184 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 Y A +YL++T + K+E T+ V Sbjct: 185 FTWYGIAALIYLLVTLVSQVGIRKLELRFTRFERGV 220 >gi|194017152|ref|ZP_03055764.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus ATCC 7061] gi|194011020|gb|EDW20590.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus ATCC 7061] Length = 216 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/163 (41%), Positives = 97/163 (59%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L VTL +A IS ++S +IG I +R F ++S I+ V R PLL+ +F Sbjct: 15 LLEGFAVTLKVAFISIILSFLIGLVIGTLR-FAQIPVLSKILAVVVETIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP IGI + I +LT+ SA +SEIIRS + SI KGQ +A+ + GLT QT+ Sbjct: 74 TYFALPEIGIKLSITASAIAALTVFESAMLSEIIRSGLKSIDKGQIEAARSSGLTYIQTL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 + II+PQ + P+ S+FIS+LK TS+A I +PE+ AQ Sbjct: 134 KMIIMPQALRRMVPPIVSQFISLLKDTSLAVVIALPELLHHAQ 176 >gi|50086541|ref|YP_048051.1| amino acid ABC transporter membrane protein [Acinetobacter sp. ADP1] gi|49532515|emb|CAG70229.1| putative amino acid transport protein (ABC superfamily, membrane) (gluP) [Acinetobacter sp. ADP1] Length = 222 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/150 (38%), Positives = 94/150 (62%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +S I YV + R TP LVQLF IF+GLP IG+ +++ A I+++ +N AY +EI+R+ Sbjct: 53 LSTIFRIYVEMIRNTPFLVQLFFIFFGLPAIGVTMNAWTASILAMIINLGAYSTEIVRAG 112 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I + PKGQ +A+ ++ +TR Q +RH++LP ++ L S+ I ++ +SV S I++ E Sbjct: 113 IQATPKGQIEAAASLAMTRFQILRHVVLPPSLGRIWPALCSQIIIVMLGSSVCSQISMEE 172 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + A I S ++ IY +A +YLIL Sbjct: 173 LTFVANFIQSRNFRGFEIYIVIAVLYLILA 202 >gi|330982419|gb|EGH80522.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 221 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 111/197 (56%), Gaps = 9/197 (4%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I + P L A+ VTL + I+ + SL + + F ++ ++ YV + R TP Sbjct: 9 ISTLPAFL-KAVGVTLQVGLIAILTSLAV-AVVNAAIAMFKVPVLHRLVPVYVELARNTP 66 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+QLF I++ LP +GI F + +I++T AY++EI+R+ I ++PK Q ++ +IG Sbjct: 67 LLIQLFFIYFALPTLGIRVSGFASAVIAMTFLGGAYLTEILRAGIEAVPKAQIESGLSIG 126 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+R Q +RH+ILPQ S L + F+ +LK T+V S + +PEI T + ++ Y+ Sbjct: 127 LSRWQLLRHVILPQAGILSLPALFANFVFLLKETTVVSAVAVPEILYTTKSYIALYYK-- 184 Query: 190 IIYCELAFVYLILTSFC 206 Y LA ++T C Sbjct: 185 -TYEMLA----VMTGLC 196 >gi|308186173|ref|YP_003930304.1| ABC transport system permease protein [Pantoea vagans C9-1] gi|308056683|gb|ADO08855.1| putative ABC transport system permease protein [Pantoea vagans C9-1] Length = 246 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 121/207 (58%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + D+F +L AA+ VTL + +F+ ++ I +R+ + S Y+ +F Sbjct: 4 FAFLTDTFLKL-SAALPVTLGLFISAFLCGGVLAVGILALRMSRWRGL-SAFARGYILVF 61 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSIIS 116 RG+PL++QLF+I+YGL G++ S F +++L+L +AY +EI+R ++++ Sbjct: 62 RGSPLMIQLFLIYYGLGQFGVIRHSIFWPFLREPFTCAVLALSLCTAAYTAEILRGALLA 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P GQ +A A G++R +R II P + + S+E I ++KST++AS +T+ ++ Sbjct: 122 VPPGQVEAGMACGMSRGLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTG 181 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 AQ+I+ TY+ + ++ A +YLIL Sbjct: 182 VAQQIIQRTYRTMEVFLCAAAIYLILN 208 >gi|238923861|ref|YP_002937377.1| amino acid ABC transporter, permease protein [Eubacterium rectale ATCC 33656] gi|238875536|gb|ACR75243.1| amino acid ABC transporter, permease protein [Eubacterium rectale ATCC 33656] Length = 508 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 118/202 (58%), Gaps = 6/202 (2%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHF 60 + N + D+ + + T+ I + ++ +++GF IA++R I++ I Sbjct: 289 YDNFVKDNRYMYIVKGLGNTIVITIFAVMLGIVLGFLIAIVRTSHDRNGGLAILNGICKA 348 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ I RGTP+++QL +I+Y + + V + + +I+ LN +AY++EI+RS I+S+ G Sbjct: 349 YLTIIRGTPVMIQLLIIYYVV--LASVTNKILVAVIAFGLNSAAYVAEIVRSGIMSVDIG 406 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A ++GL +QT++ +I+PQ + L +EFIS+LK TS++ I + ++ + Sbjct: 407 QFEAGRSLGLNYRQTMKLVIIPQAVKNILPALLNEFISLLKETSISGYIGMMDLTKGGDI 466 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 I S TY+ I +A +YL++ Sbjct: 467 IRSNTYEAFIPLIAVALIYLVI 488 >gi|145297673|ref|YP_001140514.1| ABC-type glutamine/glutamate transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142850445|gb|ABO88766.1| ABC-type glutamine/glutamate transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 221 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 114/209 (54%), Gaps = 10/209 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++W + I+ + P A+ VTL + + SL + + V + +++ + Sbjct: 1 MTFDW-SFILGTLPAF-GKAVWVTLQLGAMVIFTSLGVAL-LNVTLLSLQKPLLAAFIRG 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TPLL+QLF +++GLP +G+ F +I++T Y++E +R+ I ++P Sbjct: 58 YVELARNTPLLIQLFFLYFGLPALGLSPSGFATAVIAMTFLGGGYLTEALRAGIQAVPTS 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A AIGL+R Q +RH+ LPQ S L + FI +LK T+VAS + +PE+ T + Sbjct: 118 QLEAGRAIGLSRWQLLRHVQLPQAWLASLPALFANFIFLLKETTVASAVAVPELLYTTKN 177 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYII 209 ++ Y+ Y LA +LT C +I Sbjct: 178 YIALYYK---TYEMLA----VLTLMCVLI 199 >gi|326204707|ref|ZP_08194562.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium papyrosolvens DSM 2782] gi|325985078|gb|EGD45919.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium papyrosolvens DSM 2782] Length = 210 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 107/182 (58%), Gaps = 10/182 (5%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 LL +VV+L I ++ + S+ +G I+ R + I I Y+ I RGTPL++QL Sbjct: 6 LLLDGMVVSLQIFALTLIFSIPLGLIISFGRRT-KNIFIRWITSIYISIMRGTPLILQLL 64 Query: 76 VIFYGLPHIGIVFDS----FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 V+++ ++ FD+ F A +I+ LN++AY +EI R I SIPKGQ++A +G T Sbjct: 65 VVYFAPSYL---FDAKVGRFTAAVIAFVLNYAAYFAEIFRGGIESIPKGQYEAGEVLGFT 121 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTYQPL 189 + Q I+LPQ I P+S+E I+++K T++ S I + E+F+ AQ S ++ QPL Sbjct: 122 KLQVFFKIVLPQVIKRVLPPISNEVITLVKDTALVSAIAVEEMFRVAQNASSRVSSVQPL 181 Query: 190 II 191 + Sbjct: 182 FV 183 >gi|306831123|ref|ZP_07464284.1| amino acid ABC superfamily ATP binding cassette transporter [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426689|gb|EFM29800.1| amino acid ABC superfamily ATP binding cassette transporter [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 522 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 117/210 (55%), Gaps = 16/210 (7%) Query: 8 LIID---SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMHFYVW 63 ++ID ++ + ++T+ ++ +S +++L++G F+ R+ SD + IS + Y+ Sbjct: 6 MVIDFLQNYGSFILDGALMTVFLSVVSMILALVLGGFVTAARM--SDNLLISGLTKLYIE 63 Query: 64 IFRGTPLLVQLFVIFYGLPHIG----------IVFDSFVAIIISLTLNFSAYISEIIRSS 113 + RG P+LV L + FYGLP +G + D ++ +I LT+ S +++EI RS Sbjct: 64 VVRGLPMLVILSLFFYGLPELGFNVPDGSLFGVDLDRLISALIGLTVGESVFVAEIYRSG 123 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++ GQ++ + +IG + QT R++I+PQ L +EF + +KS+S AS I + + Sbjct: 124 IQAVDSGQFEGARSIGFNKFQTYRYVIIPQAFKNILPTLGNEFANNIKSSSQASVIGVAD 183 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + TA I +Y+P + VYL+ T Sbjct: 184 LMFTASTIQGISYKPFQAVIAVGIVYLLFT 213 >gi|291280398|ref|YP_003497233.1| amino acid ABC transporter permease [Deferribacter desulfuricans SSM1] gi|290755100|dbj|BAI81477.1| amino acid ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 313 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 124/195 (63%), Gaps = 6/195 (3%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 S P L + VTL ++ IS ++IIG ++RI + + L + Y+ + RGTPLL Sbjct: 106 SEPGPLLMGLYVTLKLSIISIFFAIIIGIITGLMRISENPALKKLAIT-YIELIRGTPLL 164 Query: 72 VQLFVIFYGLPHIGIVF--DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 VQ+F+ ++ IG V + F A + +L + AY++EI+R+ I SI +GQ +A+ ++G Sbjct: 165 VQIFIFYF---FIGTVLQLNRFTAGVAALAVFAGAYVAEIVRAGIQSIHRGQTEAARSLG 221 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 + QT+R+IILPQ + + P++ +FIS++K +S+ S I+I ++ + + +V++T+QP Sbjct: 222 MNYFQTMRYIILPQALKRTIPPMAGQFISLIKDSSLVSVISITDLTKAGREVVTSTFQPF 281 Query: 190 IIYCELAFVYLILTS 204 ++ +A +YLILT+ Sbjct: 282 EVWFTVAALYLILTT 296 >gi|158425754|ref|YP_001527046.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158332643|dbj|BAF90128.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 219 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 117/214 (54%), Gaps = 6/214 (2%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D LL AA L ++ ++FV I+G I +R S + M Y+ + +GTPL Sbjct: 8 DILRNLLLAAEWTVL-LSLVAFVGGGIVGLAILFLRTGRSRGLRRAAM-LYIELIQGTPL 65 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L+QLF+ F+GL +G + A +SLTL SA+++EI R + S+P+GQW+AS ++ + Sbjct: 66 LMQLFLSFFGLSLLGFDVPPWFAAGLSLTLWTSAFLAEIWRGCVESVPRGQWEASASLAM 125 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T + +RH++LPQ + + P + ++K T++ S I E+ + + I + T+QP + Sbjct: 126 TYFEQMRHVVLPQALRIAVPPTVGFSVQVVKGTALTSIIGFVELSKASTMITNATFQPFV 185 Query: 191 IYCELAFVYLI----LTSFCYIIQIKIESSVTQH 220 +Y A +Y L+ I++ K+ + H Sbjct: 186 VYGLAALIYFALCWPLSKSSQILERKLNVAHRNH 219 >gi|291524539|emb|CBK90126.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Eubacterium rectale DSM 17629] Length = 504 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 118/202 (58%), Gaps = 6/202 (2%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHF 60 + N + D+ + + T+ I + ++ +++GF IA++R I++ I Sbjct: 285 YDNFVKDNRYMYIVKGLGNTIVITIFAVMLGIVLGFLIAIVRTSHDRNGGLAILNGICKA 344 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ I RGTP+++QL +I+Y + + V + + +I+ LN +AY++EI+RS I+S+ G Sbjct: 345 YLTIIRGTPVMIQLLIIYYVV--LASVTNKILVAVIAFGLNSAAYVAEIVRSGIMSVDIG 402 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A ++GL +QT++ +I+PQ + L +EFIS+LK TS++ I + ++ + Sbjct: 403 QFEAGRSLGLNYRQTMKLVIIPQAVKNILPALLNEFISLLKETSISGYIGMMDLTKGGDI 462 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 I S TY+ I +A +YL++ Sbjct: 463 IRSNTYEAFIPLIAVALIYLVI 484 >gi|229593010|ref|YP_002875129.1| putative ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229364876|emb|CAY52940.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 236 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 106/170 (62%), Gaps = 11/170 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLP-------HIGIVF---DSFVAIIISLTLNFSAYISEII 110 YV+ FRG+PLLVQLF+++YGL +G+ + D+++ +++ TLN +AY +EI+ Sbjct: 66 YVYFFRGSPLLVQLFMLYYGLGSFKGFWQEVGLWWFFRDAWLCTLLAFTLNTAAYQAEIM 125 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R ++ +I GQ +AS +GL+R T+R +ILPQ++ + PL +E + ++K++S+AS +T Sbjct: 126 RGALTAIAPGQREASQTLGLSRWTTLRKVILPQSLLVAIGPLGNELVLMIKASSIASLVT 185 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I ++ + S T+ IY A +YL++ ++E S+++H Sbjct: 186 IYDLMGVTKLAFSRTFD-FQIYLWAAVLYLVIVEVVRRALKRLERSLSKH 234 >gi|170757509|ref|YP_001781580.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum B1 str. Okra] gi|169122721|gb|ACA46557.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum B1 str. Okra] Length = 228 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/163 (35%), Positives = 95/163 (58%), Gaps = 10/163 (6%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD----------SFVAIIISLTL 100 + I+ I Y+ RGTP+LVQL++I+YGLP IGI F F A I++L++ Sbjct: 46 NKILKYIAVSYIEFIRGTPVLVQLYIIYYGLPTIGIRFPEVPILGSNFPDFFAGILALSI 105 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N AY++EIIR+ I ++ KGQ +A+ ++G++ ++++I+PQ L +EFI+I+ Sbjct: 106 NSGAYVAEIIRAGIQAVDKGQMEAARSLGMSESMAMKNVIIPQAFKNILPALGNEFITII 165 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 K +S+ S I I E+ A + ++P A +Y ILT Sbjct: 166 KESSIVSIIGIHELMYNADTVRGNIFRPFEPLLVAALMYFILT 208 >gi|219666813|ref|YP_002457248.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD [Desulfitobacterium hafniense DCB-2] gi|219537073|gb|ACL18812.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Desulfitobacterium hafniense DCB-2] Length = 218 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 70/217 (32%), Positives = 123/217 (56%), Gaps = 3/217 (1%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W + I FP++ +AA+ +T+ F ++L +G F+ I S I+ +V Sbjct: 2 WNW-DFAIKIFPEI-FAALKITVTATFAGFFLALFLGMFL-TIGSRSSLKPIAYGSKGFV 58 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 R TPLLVQL+ IFY LP G+ A I+ L +++S Y+SE+ RS I ++P+GQW Sbjct: 59 EFIRSTPLLVQLYFIFYVLPQAGLSLSPLTAGIMGLGIHYSTYLSEVYRSGIEAVPQGQW 118 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A+ + Q II+PQ + + + I++ K T + S IT+ EI QTA+ I Sbjct: 119 EAAKALNFSPWQVWSKIIIPQAVPPVIPVMGNYLITMFKETPLLSAITLVEILQTAKIIG 178 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S +++ L + + F++L+L+ C ++ ++E +T+ Sbjct: 179 SHSFRYLEGFTIVGFLFLLLSYPCSVMIRRLEMRMTK 215 >gi|295697439|ref|YP_003590677.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus tusciae DSM 2912] gi|295413041|gb|ADG07533.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus tusciae DSM 2912] Length = 232 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 14/202 (6%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P LL A ++ + C +F ++ +G IA+ RIF I +++ F + + RGTPLLVQ Sbjct: 15 PSLLEALWLIIVLSVC-AFALAFGVGMLIALGRIFGKRPIQTVLTAF-LELIRGTPLLVQ 72 Query: 74 LFVIFYGLPHI------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 L ++Y +P I + +F A +I L +N+ Y+SE+ RSS+++I KGQ Sbjct: 73 LLYVYYVIPEIFTRVIDLWIPDYHMNLSAFAASVIGLGINYGCYLSEVFRSSLLAIDKGQ 132 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A A+G T +Q + HI++PQ+ S PL + F ++LK TS+ + IT+ EI Q Sbjct: 133 IEACLALGYTHRQAMFHIVIPQSFLISLPPLGNYFNAMLKDTSLCAFITLGEIILKTQAY 192 Query: 182 VSTTYQPLIIYCELAFVYLILT 203 S T+ + Y A +YLI++ Sbjct: 193 ASQTFLTIESYTIAAGIYLIVS 214 >gi|84387890|ref|ZP_00990904.1| amino acid ABC transporter, permease protein [Vibrio splendidus 12B01] gi|84377236|gb|EAP94105.1| amino acid ABC transporter, permease protein [Vibrio splendidus 12B01] Length = 265 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 67/195 (34%), Positives = 121/195 (62%), Gaps = 6/195 (3%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF-YVWIFRGTP 69 + +P L ++VT+ I+ IS V +LIIG A++R S++++ + YV + R TP Sbjct: 54 EWWPAELVEGLLVTINISLISLVATLIIGLTTALLR--NSNSVVGRTLATSYVELIRNTP 111 Query: 70 LLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 LLVQ++++++ P +G+ D F +++L L AY +EI R+ + I +GQ++A+ ++ Sbjct: 112 LLVQIYLLYFVFGPVLGL--DRFSTAVLALALFQGAYTAEIFRAGLNGIARGQFEAAQSL 169 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL++ T +ILPQ + + PL++E IS++K++S+ S + I ++ A+ IVS T P Sbjct: 170 GLSKTYTYWDVILPQVVQRTLPPLTNEVISLIKNSSIVSVMAIFDLTTEARNIVSETAMP 229 Query: 189 LIIYCELAFVYLILT 203 I+ +A +YL LT Sbjct: 230 FEIWFSVAIIYLALT 244 >gi|291527965|emb|CBK93551.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Eubacterium rectale M104/1] Length = 504 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 118/202 (58%), Gaps = 6/202 (2%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHF 60 + N + D+ + + T+ I + ++ +++GF IA++R I++ I Sbjct: 285 YDNFVKDNRYMYIVKGLGNTIVITIFAVMLGIVLGFLIAIVRTSHDRNGGLAILNGICKA 344 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ I RGTP+++QL +I+Y + + V + + +I+ LN +AY++EI+RS I+S+ G Sbjct: 345 YLTIIRGTPVMIQLLIIYYVV--LASVTNKILVAVIAFGLNSAAYVAEIVRSGIMSVDIG 402 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A ++GL +QT++ +I+PQ + L +EFIS+LK TS++ I + ++ + Sbjct: 403 QFEAGRSLGLNYRQTMKLVIIPQAVKNILPALLNEFISLLKETSISGYIGMMDLTKGGDI 462 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 I S TY+ I +A +YL++ Sbjct: 463 IRSNTYEAFIPLIAVALIYLVI 484 >gi|218282661|ref|ZP_03488876.1| hypothetical protein EUBIFOR_01462 [Eubacterium biforme DSM 3989] gi|218216424|gb|EEC89962.1| hypothetical protein EUBIFOR_01462 [Eubacterium biforme DSM 3989] Length = 538 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 74/197 (37%), Positives = 117/197 (59%), Gaps = 13/197 (6%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 +PQLL + VTL +A I+ + IIG A++++ + I+ I YV + RGTPLL+ Sbjct: 331 WPQLL-KGLGVTLGLAAITVIFGTIIGGLFALVKLS-KNKIVQAIAGVYVELIRGTPLLL 388 Query: 73 QLFV---IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 QL++ IF L + + V++II+L +N SAY++EIIRS I S+ KGQ +A+ ++G Sbjct: 389 QLWLFINIFSYLTNGKMPM--IVSVIIALIINSSAYVAEIIRSGIQSVDKGQREAAKSLG 446 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY--- 186 ++ + II+PQ I L +EF+ ++K TS+AST I E+ I S TY Sbjct: 447 MSNVHMMTKIIIPQAIKNILPALGNEFVMMIKETSLASTFYIGELMTVNSVIKSATYKSI 506 Query: 187 QPLIIYCELAFVYLILT 203 +PL+I + +Y I+T Sbjct: 507 EPLVI---VGLIYFIVT 520 >gi|163745604|ref|ZP_02152964.1| ABC transporter permease protein [Oceanibulbus indolifex HEL-45] gi|161382422|gb|EDQ06831.1| ABC transporter permease protein [Oceanibulbus indolifex HEL-45] Length = 223 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 62/176 (35%), Positives = 107/176 (60%), Gaps = 4/176 (2%) Query: 5 WFNLII--DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 +FNL + +FP +L +V T+ + + I+G + ++R++ + L+ Y Sbjct: 7 FFNLDVMRRAFP-ILMRGLVNTILLGFSAIFFGGILGVLVCLVRLYAAKPF-RLLAVLYT 64 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 IFR P+LV L +++Y LP GIVF SFVA I+L L +AY +E++R+ I ++P+GQ+ Sbjct: 65 DIFRAIPVLVVLILVYYALPFAGIVFSSFVAATIALALVLAAYTAEVVRAGIEAVPRGQF 124 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +A A+GL+ T+R +ILPQ PL+S ++I+K TS+AS + + ++ + A Sbjct: 125 EACDALGLSFATTMRKVILPQAFRMMIPPLASYAVAIMKDTSLASVVAMDDLLKQA 180 >gi|70729565|ref|YP_259303.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68343864|gb|AAY91470.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 236 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 120/211 (56%), Gaps = 12/211 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++VT + ISF + ++G IA+ R+ S+ + YV+ FRG+PLL QLF+++Y Sbjct: 26 GLLVTAKLVAISFSLGAVLGLLIALGRLS-SNRFLRRFTGAYVYFFRGSPLLAQLFMLYY 84 Query: 80 GLP-------HIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 GL +G+ + D++ +++ TLN +AY +EI+R S++++ +GQ +A A+ Sbjct: 85 GLGSFKGFWQDVGLWWFFRDAWFCTLLAFTLNTAAYQAEILRGSLLAVAQGQREACKALS 144 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+R R +ILPQ++ + PL +E I ++K++++AS +TI ++ + S ++ Sbjct: 145 LSRWTAFRKVILPQSLLIAIGPLGNELILMIKASAIASLVTIYDLMGVTKLAFSRSFD-F 203 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 IY A +YL++ +E + +H Sbjct: 204 QIYLWAAVLYLLIVEVVRRSLKYLEGRLGRH 234 >gi|224369395|ref|YP_002603559.1| GlnP6 [Desulfobacterium autotrophicum HRM2] gi|223692112|gb|ACN15395.1| GlnP6 [Desulfobacterium autotrophicum HRM2] Length = 223 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 59/144 (40%), Positives = 88/144 (61%), Gaps = 1/144 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ RGTP+LVQ ++YG+P +G+ A II + +N AYI+EI+R S+ SI Sbjct: 60 YIESIRGTPMLVQAMFLYYGVPMAMGLRIPPITAGIIIIAVNSGAYIAEIVRGSVQSIDP 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A +IGLTR QT+ +II PQ PL ++FI LK TS+ I + E+ +T Q Sbjct: 120 GQTEAGRSIGLTRSQTMAYIIWPQAFKRMIPPLGNQFIISLKDTSLLMVIGVGELLRTGQ 179 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 IV+ +++ +Y +A VYL +T Sbjct: 180 EIVAVSFKAFEVYLSVAVVYLAMT 203 >gi|218548331|ref|YP_002382122.1| glutamine ABC transporter permease [Escherichia fergusonii ATCC 35469] gi|218355872|emb|CAQ88487.1| glutamine transporter subunit ; membrane component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|324112751|gb|EGC06727.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia fergusonii B253] Length = 219 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 123/220 (55%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P L+ A +TL I+ + L+IG R F I + I Sbjct: 1 MQFDW-SAIWPAIPLLIEGA-KMTLWISVLGLAGGLVIGLLAGFARTF-GGWIANHIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R +TIR++ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A YLI+T I ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMK 217 >gi|187730568|ref|YP_001881002.1| glutamine ABC transporter permease [Shigella boydii CDC 3083-94] gi|301020697|ref|ZP_07184765.1| glutamine ABC transporter permease protein [Escherichia coli MS 69-1] gi|187427560|gb|ACD06834.1| glutamine ABC transporter, permease protein [Shigella boydii CDC 3083-94] gi|300398508|gb|EFJ82046.1| glutamine ABC transporter permease protein [Escherichia coli MS 69-1] Length = 219 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 123/220 (55%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P L+ A +TL I+ + L+IG R F I + + Sbjct: 1 MQFDW-SAIWPAIPLLIEGA-KMTLWISVLGLAGGLVIGLLAGFARTF-GGWIANHVALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R +TIR+IILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSRWETIRYIILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A YLI+T I ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMK 217 >gi|26991114|ref|NP_746539.1| amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] gi|24986152|gb|AAN70003.1|AE016638_11 amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] Length = 218 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 66/223 (29%), Positives = 127/223 (56%), Gaps = 13/223 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV----IRIFFSDTIISLIM 58 ++W N I P+L AA+ T+ + + F I++++G F+A+ RI+ S I +I Sbjct: 4 FDW-NYAIQLLPELFRAALN-TIGVTLLGFAIAIVLGLFLAIGRRSARIWISWPIGGVIE 61 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 R TPLL+Q++ ++Y LP+ G+ + ++ + L+++ Y++E+ RS + ++P Sbjct: 62 -----FIRSTPLLIQVYFLYYVLPNYGVSLTAMQVGVLGIGLHYACYLAEVYRSGLDAVP 116 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW+A A+ ++ R+IILPQ + P+ + +++LK T V S IT+ EI Q A Sbjct: 117 RGQWEAVTALNMSPSLAYRNIILPQALRPILPPVGNYLVAMLKDTPVLSAITVVEIMQQA 176 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQH 220 + I S T++ L + +L L+ Y+++ ++E+ + Q Sbjct: 177 KNIGSETFRYLEPITMVGVFFLALSIVLAYLVR-RVEARLEQK 218 >gi|283956246|ref|ZP_06373726.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 1336] gi|283791966|gb|EFC30755.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 1336] Length = 247 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 120/204 (58%), Gaps = 15/204 (7%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL----FVI 77 ++TL + + +I +IIGF +A++R F ++ I+ Y+ I RGTP+++QL FVI Sbjct: 53 LITLLLTACAVIIGVIIGFSLAILR-FSKFKTLNFIIDEYIDIIRGTPVILQLMIFAFVI 111 Query: 78 FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 F D+ A I++L LN SAYI+EI+RS I S+ KGQ +A+ A+GL K +++ Sbjct: 112 F-------TFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMK 164 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL-IIYCELA 196 IILPQ L++EFIS+ K TSV I++ +I +Q + + Y P II+ L Sbjct: 165 EIILPQATKNILPALANEFISLFKETSVVGFISVVDITMQSQSLQAVLYNPKPIIFTGLV 224 Query: 197 FVYLILTSFCYIIQIKIESSVTQH 220 + Y+ + F Y + K+E + ++ Sbjct: 225 Y-YVSVKIFSYFAK-KLELRMNKN 246 >gi|117620358|ref|YP_856223.1| histidine ABC transporter, permease protein HisM [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561765|gb|ABK38713.1| histidine ABC transporter, permease protein HisM [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 230 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 122/224 (54%), Gaps = 11/224 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I+ +P + + T+ + S ++ L++ + ++R + +I + Y++ F Sbjct: 3 FSIILTEWPTY-WQGLYTTVLLVAASLILGLMLAVPLGILRNS-RNWLIKGPIWAYIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHI-----GIVFDSFVAI----IISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+I+YG + +D F +++ TLN AY +EI+R ++++ Sbjct: 61 RGTPLLVQLFIIYYGAAQWEWLKNSVAWDLFAEAWFCALLAFTLNTGAYTAEIVRGAVLN 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +PKGQ +A+ A G+TR QT+ IILP + + S+E I +L+ ++VA ITI ++ Sbjct: 121 MPKGQIEAANAFGMTRWQTLTRIILPNSFRRALPAYSNEVIFMLQGSAVAGIITIVDLTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 A+ I S Y P + +Y++LT + K E+ H Sbjct: 181 AARIINSRYYSPFEAFLTAGLLYMLLTFVIVWLFKKWEARWHAH 224 >gi|226310677|ref|YP_002770571.1| amino acid ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226093625|dbj|BAH42067.1| amino acid ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 219 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 55/162 (33%), Positives = 99/162 (61%), Gaps = 6/162 (3%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV-- 87 I+ ++S+ +GF I ++ S+ ++ + H YV++ RGTPLL+QL I +GLP + +V Sbjct: 26 IAILLSIPLGFLITLLAKS-SNKALAWLAHTYVYVMRGTPLLLQLLFICFGLPLLPVVGD 84 Query: 88 ---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQT 144 D FVA + LN++AY +EI R ++SI KGQ++A+ +G ++ QT II+PQ Sbjct: 85 YLVMDRFVAACVGFVLNYAAYFAEIFRGGLLSIDKGQYEAAQVLGFSKWQTTNKIIMPQM 144 Query: 145 ITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 + +++E I+++K T++ + +PE+ AQ V+ + Sbjct: 145 FRVALPAVANESITLVKDTALLYAVAVPELLHFAQTAVNRDF 186 >gi|51245835|ref|YP_065719.1| glutamine ABC-transporter, permease protein (GlnP) [Desulfotalea psychrophila LSv54] gi|50876872|emb|CAG36712.1| probable glutamine ABC-transporter, permease protein (GlnP) [Desulfotalea psychrophila LSv54] Length = 222 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 65/198 (32%), Positives = 108/198 (54%), Gaps = 7/198 (3%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFYVWIFR 66 I++S P LL A +T+ + V ++G ++++ T+ + I FY+ R Sbjct: 10 IVESIPLLLGGA-KLTVYLTVGGLVFGFVLGVVFGLMKL---STLWPVRKIAGFYIETIR 65 Query: 67 GTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 GTP+LVQ +++GLP G + A +I + +N AYI+EI+R ++ SI GQ +A Sbjct: 66 GTPMLVQAMFLYFGLPMAFGFRLPALAAGVIVIAINSGAYIAEIVRGAVQSIDSGQMEAG 125 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IGLT Q +R++I PQ PL ++FI LK TS+ I + E+ +TA IV+ Sbjct: 126 RSIGLTSLQAMRYVIWPQAFRRMIPPLGNQFIISLKDTSLLMIIGVGELLRTADEIVAVN 185 Query: 186 YQPLIIYCELAFVYLILT 203 ++ +Y +YL +T Sbjct: 186 FRAFEVYLACGLIYLAMT 203 >gi|126730634|ref|ZP_01746444.1| ABC transporter, membrane spanning protein [Sagittula stellata E-37] gi|126708800|gb|EBA07856.1| ABC transporter, membrane spanning protein [Sagittula stellata E-37] Length = 216 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 109/176 (61%), Gaps = 5/176 (2%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEI 109 S+ ++ I+ YV F+GTPLL+QL+++F+G+ ++G++ ++ A I+L +A++SEI Sbjct: 45 SNRLMQRILALYVTFFQGTPLLMQLYLLFFGIAYLGVLLPAWAAAAIALIAWSAAFLSEI 104 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R + ++P+GQW+AS ++ ++ + +R+++LPQ + + P + I+K+T+V + I Sbjct: 105 WRGCVAAVPRGQWEASSSLAMSYVEQMRYVVLPQAFSLAIGPTVGFLVDIMKATAVTAII 164 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 E+FQ I +TT+QP +Y +A +Y +L C+ + I + + YSV Sbjct: 165 GYVELFQAGNAIANTTFQPFKVYGFVAIIYFLL---CW--PVSIAARRIEEKYSVS 215 >gi|194433177|ref|ZP_03065459.1| glutamine ABC transporter, permease protein [Shigella dysenteriae 1012] gi|194418674|gb|EDX34761.1| glutamine ABC transporter, permease protein [Shigella dysenteriae 1012] gi|332091105|gb|EGI96195.1| glutamine transport system permease protein glnP [Shigella dysenteriae 155-74] Length = 219 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 68/220 (30%), Positives = 123/220 (55%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P L+ A +TL I+ + L+IG R F I + + Sbjct: 1 MQFDW-SAIWPAIPLLIEGA-KMTLWISVLGLAGGLVIGLLAGFARAF-GGWIANHVALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R +TIR++ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A YLI+T I ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMK 217 >gi|261251727|ref|ZP_05944301.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP 102891] gi|260938600|gb|EEX94588.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP 102891] Length = 263 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 121/204 (59%), Gaps = 6/204 (2%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL-IMHFYVWIFRGTPLL 71 +P L +VVT+ I+ +S +L+IG A +++ SD+ + I + Y+ + R TPLL Sbjct: 54 WPAELLDGLVVTIKISALSLCFTLLIGLTTAALKL--SDSWVGRGIANLYIEVIRNTPLL 111 Query: 72 VQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 VQ++V+++ P IG+ D F +++L+L AY +EI R + SIPK Q++A+ ++GL Sbjct: 112 VQIYVLYFVFGPVIGL--DRFATAVLALSLFQGAYTAEIFRGGLNSIPKEQFEAAKSLGL 169 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T +ILPQ + + PL++E IS++K++S+ S + I ++ + IVS T P Sbjct: 170 NPFYTFYDVILPQLLQRTLPPLTNEVISLIKNSSIVSVMAIFDLTTEGRNIVSETAMPFE 229 Query: 191 IYCELAFVYLILTSFCYIIQIKIE 214 I+ +A +YL LT + + +E Sbjct: 230 IWFTVAAIYLSLTLMLSGVSVWME 253 >gi|209516393|ref|ZP_03265249.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209503155|gb|EEA03155.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 220 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 108/202 (53%), Gaps = 11/202 (5%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q + A + TL I L+IGF IAV+++F + + + Y+ + RGTP LVQL Sbjct: 14 QPIAAGLATTLGTWAAGVAIGLVIGFLIAVLQLFCGRWLRA-ALRVYIELLRGTPFLVQL 72 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F+++YG P IG+ + A I+ L L SAY +E RS S+P+G +A+ +GLTR Q Sbjct: 73 FLLYYGGPSIGLTLEPMTAGIVGLGLYGSAYFAEAFRSGFQSVPRGHLEAASCLGLTRWQ 132 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 I I PQ + L++ I + K T+V S +T+PE+ I S T+ Sbjct: 133 AIVRIQAPQMLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATF-------- 184 Query: 195 LAFVY-LILTSFCYIIQIKIES 215 AFV L++ CY+ +++ S Sbjct: 185 -AFVETLLVLCVCYLALVELTS 205 >gi|310641778|ref|YP_003946536.1| sulfur-containing amino acid abc transporter, permease protein tcym [Paenibacillus polymyxa SC2] gi|309246728|gb|ADO56295.1| Sulfur-containing amino acid ABC transporter, permease protein TcyM [Paenibacillus polymyxa SC2] Length = 236 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 118/215 (54%), Gaps = 14/215 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++A+ TL I +S + L+IG A+ RI+ + ++S I H YV RGTP+L+ L + Sbjct: 15 LFSALPNTLIITVVSVLAGLVIGIITALARIY-NVPVLSQISHGYVTFIRGTPMLMHLLL 73 Query: 77 IFYGLP--------HIGIVFDS-----FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I++ LP H G S V +IS ++ AY+SE++RS I S+ KGQ + Sbjct: 74 IYFSLPLLIDAGAKHFGWSLQSKDVPYMVFALISFSITSGAYMSEVVRSGIQSVNKGQIE 133 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+YA+G+T Q +R I+ PQ S L++ I +L +++A T+++ EI A+ + S Sbjct: 134 AAYAVGMTTWQVLRRIVFPQAFVVSLPNLTNSVIGMLHGSTLAFTVSVTEIQAQAEILAS 193 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 T ++ L +Y A ++ LT I +E + Sbjct: 194 TNWKYLEVYIAAALLFWGLTVLIERISGLVEKKIN 228 >gi|224368642|ref|YP_002602804.1| ABC-type amino acid transporter, permease component [Desulfobacterium autotrophicum HRM2] gi|223691358|gb|ACN14641.1| ABC-type amino acid transporter, permease component [Desulfobacterium autotrophicum HRM2] Length = 217 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 115/199 (57%), Gaps = 2/199 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 +FN +++ P L + +T IA IS + ++GF + ++R I+ I+ YV Sbjct: 5 YFNRLVEILP-LFLKGLWMTTQIAFISLGVCTVLGFSLGILR-SGKSVILKWIIGVYVSF 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTP +VQ+F+IF+ P G+ ++F A ++++ + SA+I EI+ I SI KGQW+A Sbjct: 63 VRGTPFVVQVFIIFFIFPEWGLQLEAFSAALLAMAIMGSAFICEIVAGGIASISKGQWEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + + GL+R Q +R +ILPQ + PL +F+ ++K TSV S I + ++ + V Sbjct: 123 AESSGLSRIQQMRLVILPQAMRVILPPLVGQFVLLIKDTSVVSVIGVMDLTRVGWITVIR 182 Query: 185 TYQPLIIYCELAFVYLILT 203 + L+++ + +Y +++ Sbjct: 183 IPEGLMVFSLVGILYFVIS 201 >gi|330719365|ref|ZP_08313965.1| polar amino acid ABC transporter permease [Leuconostoc fallax KCTC 3537] Length = 213 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 51/126 (40%), Positives = 80/126 (63%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 I +++ Y+WI RGTPLL+QL I+YGL +GI F F A +I+ +N++AY++EI R Sbjct: 47 IRWLLNGYIWIMRGTPLLLQLIFIYYGLGMMGISFPRFEAAVIAFIINYAAYLAEIFRGG 106 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + S+PKGQ+DA+ +G + QT IILPQ I + +E I+++K TS+ I + + Sbjct: 107 LQSVPKGQYDAAKVLGFNKIQTFFKIILPQVIKIVVPSVGNEVINLVKDTSLVYVIGLGD 166 Query: 174 IFQTAQ 179 I + Sbjct: 167 ILRAGN 172 >gi|319761573|ref|YP_004125510.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC] gi|330823441|ref|YP_004386744.1| polar amino acid ABC transporter inner membrane subunit [Alicycliphilus denitrificans K601] gi|317116134|gb|ADU98622.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans BC] gi|329308813|gb|AEB83228.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans K601] Length = 218 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 60/186 (32%), Positives = 114/186 (61%), Gaps = 9/186 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + I+ +++ +G +A+ R+ + S ++ Y+W+ RGTPL++Q+ I++ LP Sbjct: 18 VTLKLFVITLALAVPLGLVLALARLSRWKAL-SGAVNGYIWLMRGTPLMLQMLFIYFALP 76 Query: 83 HI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + G+ F A + + LN++AY +EI R+ I S+ +GQ++A+ +G++ QT+R I Sbjct: 77 FVPVVGVRLPDFPAAVTAFALNYAAYFAEIFRAGIQSVDRGQYEAAKVLGMSYGQTMRRI 136 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST--TYQPLIIYCELAF 197 +LPQ + + P+S+E I+++K TS+ + + ++ + A+ IV T P I+ AF Sbjct: 137 VLPQMVRSILPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDFTTTPFIVAA--AF 194 Query: 198 VYLILT 203 YL++T Sbjct: 195 -YLLMT 199 >gi|182418113|ref|ZP_02949413.1| glutamine ABC transporter, permease/substrate-binding protein [Clostridium butyricum 5521] gi|237666123|ref|ZP_04526110.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377931|gb|EDT75471.1| glutamine ABC transporter, permease/substrate-binding protein [Clostridium butyricum 5521] gi|237658213|gb|EEP55766.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium butyricum E4 str. BoNT E BL5262] Length = 219 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 67/182 (36%), Positives = 104/182 (57%), Gaps = 2/182 (1%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +T+ +A + + I+G I +IR IS I YV RGTPLLVQ+++I+ GLP Sbjct: 19 ITIVLAFFAVLFGTILGLGITLIR-RSKFKAISFIGTAYVEFMRGTPLLVQIYIIYIGLP 77 Query: 83 H-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IGI II+L+LN SAY+SEIIR+ I ++ KGQ +A+ ++G+ +KQ + +++ Sbjct: 78 KLIGIDLPDMATGIIALSLNSSAYVSEIIRAGIEAVDKGQMEAARSLGMNQKQAMFEVVI 137 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ L +EFIS++K +S+ S I + E+ A + T L A +Y I Sbjct: 138 PQAFKNILPALGNEFISVIKESSMVSVIGVAELMYNAGIVRGNTALGLEPVVVAAIIYFI 197 Query: 202 LT 203 +T Sbjct: 198 IT 199 >gi|260770437|ref|ZP_05879370.1| ABC polar amino acid transporter inner membrane protein [Vibrio furnissii CIP 102972] gi|260615775|gb|EEX40961.1| ABC polar amino acid transporter inner membrane protein [Vibrio furnissii CIP 102972] gi|315181508|gb|ADT88421.1| ABC polar amino acid transporter inner membrane protein [Vibrio furnissii NCTC 11218] Length = 216 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 67/189 (35%), Positives = 113/189 (59%), Gaps = 2/189 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D F LL AA T+ ++ I+FV ++G I ++R ++ + ++ YV +F+GTPL Sbjct: 8 DIFRSLLMAA-RWTVALSLIAFVGGGLLGLLITLLRST-RHSVFTGVIKLYVELFQGTPL 65 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L+QLF+ F+GL +G+ ++ A ++SLTL SA+ +I R I S+PKGQW+A +GL Sbjct: 66 LMQLFLAFFGLSLVGVEVSAWTAAVLSLTLFSSAFFHDIWRGCIESLPKGQWEACRTLGL 125 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + QT+R+II PQ + P + I+K T++AS I E+ + + + T+QP Sbjct: 126 SYLQTMRYIIAPQAARLAIAPTVGFSVQIVKGTALASIIGFVELTKAGTMLNNATFQPFK 185 Query: 191 IYCELAFVY 199 ++ +A +Y Sbjct: 186 VFALVALLY 194 >gi|237654575|ref|YP_002890889.1| polar amino acid ABC transporter inner membrane subunit [Thauera sp. MZ1T] gi|237625822|gb|ACR02512.1| polar amino acid ABC transporter, inner membrane subunit [Thauera sp. MZ1T] Length = 216 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 61/171 (35%), Positives = 104/171 (60%), Gaps = 9/171 (5%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAI 94 +G +A++RI + S ++ Y+W+ RGTPL++Q+ I+Y LP IGI F A Sbjct: 32 LGLALALVRIS-RFRVASQAVNAYIWLMRGTPLMLQMLFIYYALPFVPGIGIRLPDFPAA 90 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 I++ LN++AY +EI R+ I SI +GQ++ + +G + QT+R I+LPQ + P+S+ Sbjct: 91 IVAFALNYAAYFAEIFRAGIQSIDRGQYEGAKVLGFSYGQTMRRIVLPQVVKRILPPMSN 150 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTY--QPLIIYCELAFVYLILT 203 E I+++K TS+ + + ++ + A+ IV + P I+ AF YLI+T Sbjct: 151 ETITLVKDTSLIYVLALNDLLRAARGIVQRDFTITPFIVAA--AF-YLIMT 198 >gi|152985671|ref|YP_001349968.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa PA7] gi|150960829|gb|ABR82854.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa PA7] Length = 232 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 117/207 (56%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I DS P L + ++VTL + IS ++ L++ +A++R+ +++ Y ++ Sbjct: 5 FSVIWDSLP-LYFDGLLVTLRLLSISLLVGLLLAVPLALMRVS-RQPLVNFPAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +S + ++ +N SAY +EI+ S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFDAVRESALWPWLSNASFCACLAFAINTSAYTAEILAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G++R Q R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPHGEIEAAKAMGMSRLQMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLVDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + S Y P + YL LT Sbjct: 183 AARNVYSQYYLPFEAFITAGLFYLCLT 209 >gi|291279626|ref|YP_003496461.1| polar amino acid ABC transporter permease [Deferribacter desulfuricans SSM1] gi|290754328|dbj|BAI80705.1| polar amino acid ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 258 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 71/185 (38%), Positives = 109/185 (58%), Gaps = 4/185 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ-LF 75 L + VT I+ SF+I+ I GF + R S + L+ + YV IFR TPLL+Q LF Sbjct: 56 LIKGLFVTFKISFFSFIITNIFGFVFGIFRTLNSFSA-RLLGYLYVEIFRNTPLLIQILF 114 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 F P I +F + II++++ AY EIIR+ I ++ GQW+ASY++GL +T Sbjct: 115 FYFVIAPVFNI--SAFWSAIIAVSMFEGAYACEIIRAGIENVDTGQWEASYSLGLNTFKT 172 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +IILPQ I T PL++ F+S++K +++ S I I ++ AQ+ +S T+ I+ + Sbjct: 173 FIYIILPQAIKTVIYPLTNIFVSLIKDSALVSVIAIYDLTMEAQKAISETFMTFEIWIIV 232 Query: 196 AFVYL 200 AF YL Sbjct: 233 AFTYL 237 >gi|118587431|ref|ZP_01544856.1| glutamine ABC transporter, permease/substrate-binding protein [Oenococcus oeni ATCC BAA-1163] gi|118432081|gb|EAV38822.1| glutamine ABC transporter, permease/substrate-binding protein [Oenococcus oeni ATCC BAA-1163] Length = 468 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 122/216 (56%), Gaps = 8/216 (3%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W+ L+ ++P + ++ T+ + + +++ I G + V+ + S I+ + ++I Sbjct: 256 WY-LLKQNWPSFV-NGVIETIKLTVVGIILASIWGILMGVLGVAESK-ILRTFSNIIIYI 312 Query: 65 FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRG PLLV F I+ GLPH+ + +FVA I++LTLN AY ++ +S+ KGQ + Sbjct: 313 FRGLPLLVLAFFIYIGLPHLLNVKIPAFVAGILTLTLNEGAYTGAFVKGGFLSVDKGQME 372 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ + GL+ Q +R++++PQ + + L ++FI LK TS+ I + E+ QT IV+ Sbjct: 373 AARSNGLSYWQAMRYVVMPQGMRITVPSLINQFIITLKDTSILQAIGLVELTQTGNLIVA 432 Query: 184 TTYQPLIIYCELAFVYLI----LTSFCYIIQIKIES 215 T Q I+ +A +YL+ LT +Q KI++ Sbjct: 433 RTQQGFQIWAIVAIIYLVMITLLTWLSNFVQSKIKA 468 >gi|329295880|ref|ZP_08253216.1| polar amino acid ABC transporter inner membrane subunit [Plautia stali symbiont] Length = 214 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 57/160 (35%), Positives = 101/160 (63%), Gaps = 9/160 (5%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFS 103 ++S Y+ +FRG+PLL+QLF+I+YGL G++ SFV +++L+L + Sbjct: 21 LLSGFARGYILVFRGSPLLIQLFLIYYGLGQFGVIRHSFVWPFLREPFICAVLALSLCTA 80 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AY +EI+R +++++P GQ +A A G++R +RHII P + + S+E I ++KST Sbjct: 81 AYTAEILRGALLAVPAGQVEAGLACGMSRWLLLRHIIAPIMLRYALPAYSTEAILLVKST 140 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++AS +T+ ++ AQ+I+ TY+ + ++ A +YLIL Sbjct: 141 ALASLVTVWDVTGVAQQIIQRTYRTMEVFVCAAAIYLILN 180 >gi|57242586|ref|ZP_00370523.1| MW1799 [Campylobacter upsaliensis RM3195] gi|57016515|gb|EAL53299.1| MW1799 [Campylobacter upsaliensis RM3195] Length = 211 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 72/195 (36%), Positives = 111/195 (56%), Gaps = 21/195 (10%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL----FVIF 78 VT+ + + I L+ GF +A+IR F +++ I+ ++ I RGTP+++QL FVIF Sbjct: 18 VTILLTFCAVCIGLVFGFILALIR-FSPFGVLNFIVDEFIDIIRGTPVILQLMIFAFVIF 76 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 FD+ A I++L LN SAYI+EI+RS I S+ KGQ +A+ A+GL + T+R Sbjct: 77 -------TFFDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYQSTMRE 129 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 IILPQ + L++EFIS+ K TSV I++ +I ++ + + Y P I Sbjct: 130 IILPQALKNILPALANEFISLFKETSVVGFISVVDITMQSKSLQAVLYNPKPI------- 182 Query: 199 YLILTSFCYIIQIKI 213 I T Y + +KI Sbjct: 183 --IFTGLVYYVSVKI 195 >gi|114763148|ref|ZP_01442574.1| ABC transporter permease protein [Pelagibaca bermudensis HTCC2601] gi|114544201|gb|EAU47210.1| ABC transporter permease protein [Roseovarius sp. HTCC2601] Length = 223 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 59/171 (34%), Positives = 108/171 (63%), Gaps = 2/171 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++ SFP LL + +TL + S + L++G + ++R++ S + ++ Y+ +F Sbjct: 10 FEVLARSFPMLL-KGLWLTLKLGAASILAGLVLGLALCMMRLY-SVRPVQILTRIYIDVF 67 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R PLLV L +++Y LP +G+ F + + +LT+ AY +EI RS I +IPKGQ++A+ Sbjct: 68 RSIPLLVLLIIVYYALPFVGVRLSPFASAMTALTMVSGAYTAEIFRSGIEAIPKGQFEAA 127 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 A+GL +QT+ +ILPQ+I PL++ I+++K T++AS + +P++ + Sbjct: 128 AALGLGHRQTMVDVILPQSIRMVIPPLTNNSINVVKDTALASVVAMPDLLK 178 >gi|315929979|gb|EFV09130.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni 305] Length = 247 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 120/204 (58%), Gaps = 15/204 (7%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL----FVI 77 ++TL + + +I +IIGF +A++R F ++ I+ Y+ I RGTP+++QL FVI Sbjct: 53 LITLLLTACAVIIGVIIGFSLAILR-FSKFKTLNFIIDEYIDIIRGTPVILQLMIFAFVI 111 Query: 78 FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 F D+ A I++L LN SAYI+EI+RS I S+ KGQ +A+ A+GL K +++ Sbjct: 112 F-------AFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMK 164 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL-IIYCELA 196 IILPQ L++EFIS+ K TSV I++ +I +Q + + Y P II+ L Sbjct: 165 EIILPQATKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNPKPIIFTGLV 224 Query: 197 FVYLILTSFCYIIQIKIESSVTQH 220 + Y+ + F Y + K+E + ++ Sbjct: 225 Y-YVSVKIFSYFAK-KLELRMNKN 246 >gi|52080938|ref|YP_079729.1| high affinity arginine transport system permease [Bacillus licheniformis ATCC 14580] gi|52786313|ref|YP_092142.1| YqiY [Bacillus licheniformis ATCC 14580] gi|319645106|ref|ZP_07999339.1| YqiY protein [Bacillus sp. BT1B_CT2] gi|52004149|gb|AAU24091.1| high affinity arginine transport system permease protein [Bacillus licheniformis ATCC 14580] gi|52348815|gb|AAU41449.1| YqiY [Bacillus licheniformis ATCC 14580] gi|317392915|gb|EFV73709.1| YqiY protein [Bacillus sp. BT1B_CT2] Length = 220 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 61/183 (33%), Positives = 111/183 (60%), Gaps = 4/183 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + + V+ ++G I +++I S ++ I FY IFRGTPL++QL +++YGLP Sbjct: 22 VTLKVVAAAAVLGFLLGVLITLLKIS-SIKPLAWIADFYTSIFRGTPLVLQLMIVYYGLP 80 Query: 83 HI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + G D++ A +I+ LN +AY+SEIIR+ I +I KGQ +A+ A+G+ + ++ ++L Sbjct: 81 QVLGFDIDAYWAAVIAFGLNSAAYVSEIIRAGINAIDKGQKEAAMALGVPYAKMMKDLLL 140 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL--IIYCELAFVY 199 PQ L +E I++ K ++V + I + +I + + + + Y PL +++ L + Sbjct: 141 PQAFKNIMPALINESITLTKESAVVTVIGLGDIMRRSYQAGAAIYSPLEPMLFAGLIYYV 200 Query: 200 LIL 202 L+L Sbjct: 201 LVL 203 >gi|153951169|ref|YP_001398026.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Campylobacter jejuni subsp. doylei 269.97] gi|152938615|gb|ABS43356.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. doylei 269.97] Length = 247 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 120/204 (58%), Gaps = 15/204 (7%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL----FVI 77 ++TL + + +I +IIGF +A++R F ++ I+ Y+ I RGTP+++QL FVI Sbjct: 53 LITLLLTACAVIIGVIIGFNLAILR-FSKFKTLNFIIDEYIDIIRGTPVILQLMIFAFVI 111 Query: 78 FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 F D+ A I++L LN SAYI+EI+RS I S+ KGQ +A+ A+GL K +++ Sbjct: 112 F-------TFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMK 164 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL-IIYCELA 196 IILPQ L++EFIS+ K TSV I++ +I +Q + + Y P II+ L Sbjct: 165 EIILPQATKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNPKPIIFTGLV 224 Query: 197 FVYLILTSFCYIIQIKIESSVTQH 220 + Y+ + F Y + K+E + ++ Sbjct: 225 Y-YVSVKIFSYFAK-KLELRMNKN 246 >gi|116491766|ref|YP_811310.1| ABC-type amino acid transport system, permease and periplasmic component [Oenococcus oeni PSU-1] gi|116092491|gb|ABJ57645.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Oenococcus oeni PSU-1] Length = 468 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 122/216 (56%), Gaps = 8/216 (3%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W+ L+ ++P + ++ T+ + + +++ I G + V+ + S I+ + ++I Sbjct: 256 WY-LLKQNWPSFV-NGVIETIKLTVVGIILASIWGILMGVLGVAESK-ILRTFSNIIIYI 312 Query: 65 FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRG PLLV F I+ GLPH+ + +FVA I++LTLN AY ++ +S+ KGQ + Sbjct: 313 FRGLPLLVLAFFIYIGLPHLLNVKIPAFVAGILTLTLNEGAYTGAFVKGGFLSVDKGQME 372 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ + GL+ Q +R++++PQ + + L ++FI LK TS+ I + E+ QT IV+ Sbjct: 373 AARSNGLSYWQAMRYVVMPQGMRITVPSLINQFIITLKDTSILQAIGLVELTQTGNLIVA 432 Query: 184 TTYQPLIIYCELAFVYLI----LTSFCYIIQIKIES 215 T Q I+ +A +YL+ LT +Q KI++ Sbjct: 433 RTQQGFQIWAIVAIIYLVMITLLTWLSNFVQSKIKA 468 >gi|153855009|ref|ZP_01996222.1| hypothetical protein DORLON_02228 [Dorea longicatena DSM 13814] gi|149752506|gb|EDM62437.1| hypothetical protein DORLON_02228 [Dorea longicatena DSM 13814] Length = 229 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 121/223 (54%), Gaps = 19/223 (8%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHFYV 62 N I D+ + + + +TL + + +I +++GF IA++R T I++ I Y+ Sbjct: 11 NFIDDNRWRYITDGLKITLLVTVFAVLIGVVLGFLIAIVRTTHDKTGKLKILNAICKVYL 70 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSF-----VAIIISLTLNFSAYISEIIRSSIISI 117 + RGTP++VQL +I++ I+F S V I++ +N AY++EI RS I+SI Sbjct: 71 TVIRGTPVVVQLMIIYF------IIFGSVDISKVVVAIVAFGINSGAYVAEIFRSGIMSI 124 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQ++A ++G QT+ +I++PQ L +EFIS+LK TSV+ I + ++ + Sbjct: 125 DNGQFEAGRSLGFNYAQTMMYIVMPQAFKNVLPTLCNEFISLLKETSVSGYIALQDLTKG 184 Query: 178 AQRIVSTTYQPLIIYCELAFVYL----ILTSFCYIIQIKIESS 216 I S TY + +A +YL I T +++ ++ +S Sbjct: 185 GDIIRSRTYDAFMPLIAVALIYLAMVMIFTKLVSLLERRLRNS 227 >gi|15800562|ref|NP_286574.1| glutamine ABC transporter permease protein [Escherichia coli O157:H7 EDL933] gi|15830142|ref|NP_308915.1| glutamine ABC transporter permease [Escherichia coli O157:H7 str. Sakai] gi|16128778|ref|NP_415331.1| glutamine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|24112178|ref|NP_706688.1| glutamine ABC transporter permease protein [Shigella flexneri 2a str. 301] gi|26246785|ref|NP_752825.1| glutamine ABC transporter permease [Escherichia coli CFT073] gi|30062294|ref|NP_836465.1| glutamine ABC transporter permease protein [Shigella flexneri 2a str. 2457T] gi|74311353|ref|YP_309772.1| glutamine ABC transporter permease [Shigella sonnei Ss046] gi|82543256|ref|YP_407203.1| glutamine ABC transporter permease protein [Shigella boydii Sb227] gi|82776111|ref|YP_402458.1| glutamine ABC transporter permease protein [Shigella dysenteriae Sd197] gi|89107661|ref|AP_001441.1| glutamine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|91209844|ref|YP_539830.1| glutamine ABC transporter permease [Escherichia coli UTI89] gi|110641014|ref|YP_668742.1| glutamine ABC transporter permease protein [Escherichia coli 536] gi|110804810|ref|YP_688330.1| glutamine ABC transporter permease [Shigella flexneri 5 str. 8401] gi|117622991|ref|YP_851904.1| glutamine ABC transporter permease protein [Escherichia coli APEC O1] gi|157157493|ref|YP_001462004.1| glutamine ABC transporter permease protein [Escherichia coli E24377A] gi|157160287|ref|YP_001457605.1| glutamine ABC transporter permease protein [Escherichia coli HS] gi|168749989|ref|ZP_02775011.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|168764283|ref|ZP_02789290.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|168777206|ref|ZP_02802213.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|168779357|ref|ZP_02804364.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|168787026|ref|ZP_02812033.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|168799913|ref|ZP_02824920.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|170020834|ref|YP_001725788.1| glutamine ABC transporter permease protein [Escherichia coli ATCC 8739] gi|170080469|ref|YP_001729789.1| glutamine ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170683637|ref|YP_001742914.1| glutamine ABC transporter permease [Escherichia coli SMS-3-5] gi|188493452|ref|ZP_03000722.1| glutamine ABC transporter, permease protein [Escherichia coli 53638] gi|191166172|ref|ZP_03028006.1| glutamine ABC transporter, permease protein [Escherichia coli B7A] gi|191173751|ref|ZP_03035274.1| glutamine ABC transporter, permease protein [Escherichia coli F11] gi|193064434|ref|ZP_03045515.1| glutamine ABC transporter, permease protein [Escherichia coli E22] gi|193069376|ref|ZP_03050331.1| glutamine ABC transporter, permease protein [Escherichia coli E110019] gi|194428172|ref|ZP_03060715.1| glutamine ABC transporter, permease protein [Escherichia coli B171] gi|194438438|ref|ZP_03070528.1| glutamine ABC transporter, permease protein [Escherichia coli 101-1] gi|195936851|ref|ZP_03082233.1| glutamine ABC transporter permease protein [Escherichia coli O157:H7 str. EC4024] gi|208809031|ref|ZP_03251368.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208815025|ref|ZP_03256204.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208822695|ref|ZP_03263014.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209399532|ref|YP_002269480.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|209918057|ref|YP_002292141.1| glutamine ABC transporter permease [Escherichia coli SE11] gi|215485897|ref|YP_002328328.1| glutamine ABC transporter permease protein [Escherichia coli O127:H6 str. E2348/69] gi|217324127|ref|ZP_03440211.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. TW14588] gi|218553396|ref|YP_002386309.1| glutamine ABC transporter permease [Escherichia coli IAI1] gi|218557715|ref|YP_002390628.1| glutamine ABC transporter permease protein [Escherichia coli S88] gi|218688596|ref|YP_002396808.1| glutamine ABC transporter permease [Escherichia coli ED1a] gi|218694284|ref|YP_002401951.1| glutamine ABC transporter permease protein [Escherichia coli 55989] gi|218699184|ref|YP_002406813.1| glutamine ABC transporter permease [Escherichia coli IAI39] gi|218704188|ref|YP_002411707.1| glutamine ABC transporter permease protein [Escherichia coli UMN026] gi|227884227|ref|ZP_04002032.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Escherichia coli 83972] gi|237707230|ref|ZP_04537711.1| glutamine transporter subunit [Escherichia sp. 3_2_53FAA] gi|238900069|ref|YP_002925865.1| glutamine transporter subunit [Escherichia coli BW2952] gi|253774187|ref|YP_003037018.1| glutamine ABC transporter permease [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160887|ref|YP_003043995.1| glutamine ABC transporter permease [Escherichia coli B str. REL606] gi|254792005|ref|YP_003076842.1| glutamine ABC transporter permease [Escherichia coli O157:H7 str. TW14359] gi|256021119|ref|ZP_05434984.1| glutamine ABC transporter permease protein [Shigella sp. D9] gi|256023594|ref|ZP_05437459.1| glutamine ABC transporter permease protein [Escherichia sp. 4_1_40B] gi|260843053|ref|YP_003220831.1| glutamine high-affinity transport system, membrane component [Escherichia coli O103:H2 str. 12009] gi|261225459|ref|ZP_05939740.1| glutamine transporter subunit; membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261258572|ref|ZP_05951105.1| glutamine high-affinity transport system, membrane component [Escherichia coli O157:H7 str. FRIK966] gi|291281807|ref|YP_003498625.1| Glutamine transport system permease protein glnP [Escherichia coli O55:H7 str. CB9615] gi|293404110|ref|ZP_06648104.1| glnP [Escherichia coli FVEC1412] gi|293409186|ref|ZP_06652762.1| glnP [Escherichia coli B354] gi|293433071|ref|ZP_06661499.1| glnP [Escherichia coli B088] gi|300816458|ref|ZP_07096680.1| glutamine ABC transporter permease protein [Escherichia coli MS 107-1] gi|300824271|ref|ZP_07104388.1| glutamine ABC transporter permease protein [Escherichia coli MS 119-7] gi|300898302|ref|ZP_07116652.1| glutamine ABC transporter permease protein [Escherichia coli MS 198-1] gi|300907140|ref|ZP_07124805.1| glutamine ABC transporter permease protein [Escherichia coli MS 84-1] gi|300920060|ref|ZP_07136518.1| glutamine ABC transporter permease protein [Escherichia coli MS 115-1] gi|300922835|ref|ZP_07138921.1| glutamine ABC transporter permease protein [Escherichia coli MS 182-1] gi|300929386|ref|ZP_07144856.1| glutamine ABC transporter permease protein [Escherichia coli MS 187-1] gi|300939847|ref|ZP_07154484.1| glutamine ABC transporter permease protein [Escherichia coli MS 21-1] gi|300947106|ref|ZP_07161322.1| glutamine ABC transporter permease protein [Escherichia coli MS 116-1] gi|300957009|ref|ZP_07169258.1| glutamine ABC transporter permease protein [Escherichia coli MS 175-1] gi|300993337|ref|ZP_07180353.1| glutamine ABC transporter permease protein [Escherichia coli MS 45-1] gi|301027259|ref|ZP_07190618.1| glutamine ABC transporter permease protein [Escherichia coli MS 196-1] gi|301051267|ref|ZP_07198095.1| glutamine ABC transporter permease protein [Escherichia coli MS 185-1] gi|301303568|ref|ZP_07209690.1| glutamine ABC transporter permease protein [Escherichia coli MS 124-1] gi|301328004|ref|ZP_07221167.1| glutamine ABC transporter permease protein [Escherichia coli MS 78-1] gi|301646242|ref|ZP_07246137.1| glutamine ABC transporter permease protein [Escherichia coli MS 146-1] gi|306812787|ref|ZP_07446980.1| glutamine ABC transporter permease protein [Escherichia coli NC101] gi|307137435|ref|ZP_07496791.1| glutamine ABC transporter permease protein [Escherichia coli H736] gi|307313780|ref|ZP_07593397.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|309786523|ref|ZP_07681146.1| glutamine transport system permease protein glnP [Shigella dysenteriae 1617] gi|309798040|ref|ZP_07692416.1| glutamine ABC transporter permease protein [Escherichia coli MS 145-7] gi|312969166|ref|ZP_07783373.1| glutamine transport system permease protein glnP [Escherichia coli 2362-75] gi|312970887|ref|ZP_07785066.1| glutamine transport system permease protein glnP [Escherichia coli 1827-70] gi|331641326|ref|ZP_08342461.1| glutamine transport system permease protein GlnP [Escherichia coli H736] gi|331646029|ref|ZP_08347132.1| glutamine transport system permease protein GlnP [Escherichia coli M605] gi|331651819|ref|ZP_08352838.1| glutamine transport system permease protein GlnP [Escherichia coli M718] gi|331656831|ref|ZP_08357793.1| glutamine transport system permease protein GlnP [Escherichia coli TA206] gi|331662167|ref|ZP_08363090.1| glutamine transport system permease protein GlnP [Escherichia coli TA143] gi|331667179|ref|ZP_08368044.1| glutamine transport system permease protein GlnP [Escherichia coli TA271] gi|331672316|ref|ZP_08373107.1| glutamine transport system permease protein GlnP [Escherichia coli TA280] gi|331676548|ref|ZP_08377244.1| glutamine transport system permease protein GlnP [Escherichia coli H591] gi|331682317|ref|ZP_08382936.1| glutamine transport system permease protein GlnP [Escherichia coli H299] gi|332282346|ref|ZP_08394759.1| glutamine transporter GlnP [Shigella sp. D9] gi|84028669|sp|P0AEQ8|GLNP_ECO57 RecName: Full=Glutamine transport system permease protein glnP gi|84028670|sp|P0AEQ7|GLNP_ECOL6 RecName: Full=Glutamine transport system permease protein glnP gi|84028671|sp|P0AEQ6|GLNP_ECOLI RecName: Full=Glutamine transport system permease protein glnP gi|84028672|sp|P0AEQ9|GLNP_SHIFL RecName: Full=Glutamine transport system permease protein glnP gi|12513809|gb|AAG55182.1|AE005262_2 glutamine high-affinity transport system; membrane component [Escherichia coli O157:H7 str. EDL933] gi|26107184|gb|AAN79368.1|AE016757_272 Glutamine transport system permease protein glnP [Escherichia coli CFT073] gi|41572|emb|CAA32383.1| unnamed protein product [Escherichia coli K-12] gi|1787030|gb|AAC73897.1| glutamine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|4062376|dbj|BAA35482.1| glutamine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|13360347|dbj|BAB34311.1| membrane component of glutamine high-affinity transport system [Escherichia coli O157:H7 str. Sakai] gi|24051018|gb|AAN42395.1| glutamine transport protein GlnP [Shigella flexneri 2a str. 301] gi|30040539|gb|AAP16271.1| glutamine transport protein GlnP [Shigella flexneri 2a str. 2457T] gi|73854830|gb|AAZ87537.1| glutamine high-affinity transport system membrane component [Shigella sonnei Ss046] gi|81240259|gb|ABB60969.1| glutamine high-affinity transport system, membrane component [Shigella dysenteriae Sd197] gi|81244667|gb|ABB65375.1| glutamine high-affinity transport system, membrane component [Shigella boydii Sb227] gi|91071418|gb|ABE06299.1| glutamine transport system permease protein glnP [Escherichia coli UTI89] gi|110342606|gb|ABG68843.1| glutamine transport system permease protein GlnP [Escherichia coli 536] gi|110614358|gb|ABF03025.1| glutamine high-affinity transport system [Shigella flexneri 5 str. 8401] gi|115512115|gb|ABJ00190.1| glutamine transport protein GlnP [Escherichia coli APEC O1] gi|157065967|gb|ABV05222.1| glutamine ABC transporter, permease protein [Escherichia coli HS] gi|157079523|gb|ABV19231.1| glutamine ABC transporter, permease protein [Escherichia coli E24377A] gi|169755762|gb|ACA78461.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|169888304|gb|ACB02011.1| glutamine transporter subunit; membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|170521355|gb|ACB19533.1| glutamine ABC transporter, permease protein [Escherichia coli SMS-3-5] gi|187767493|gb|EDU31337.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|188015705|gb|EDU53827.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|188488651|gb|EDU63754.1| glutamine ABC transporter, permease protein [Escherichia coli 53638] gi|189002956|gb|EDU71942.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|189365687|gb|EDU84103.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|189373069|gb|EDU91485.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|189377797|gb|EDU96213.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|190903781|gb|EDV63496.1| glutamine ABC transporter, permease protein [Escherichia coli B7A] gi|190906001|gb|EDV65617.1| glutamine ABC transporter, permease protein [Escherichia coli F11] gi|192928896|gb|EDV82509.1| glutamine ABC transporter, permease protein [Escherichia coli E22] gi|192957329|gb|EDV87777.1| glutamine ABC transporter, permease protein [Escherichia coli E110019] gi|194413732|gb|EDX30011.1| glutamine ABC transporter, permease protein [Escherichia coli B171] gi|194422662|gb|EDX38659.1| glutamine ABC transporter, permease protein [Escherichia coli 101-1] gi|208728832|gb|EDZ78433.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208731673|gb|EDZ80361.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208738180|gb|EDZ85863.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209160932|gb|ACI38365.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|209775798|gb|ACI86211.1| membrane component of glutamine high-affinity transport system [Escherichia coli] gi|209775800|gb|ACI86212.1| membrane component of glutamine high-affinity transport system [Escherichia coli] gi|209775802|gb|ACI86213.1| membrane component of glutamine high-affinity transport system [Escherichia coli] gi|209775804|gb|ACI86214.1| membrane component of glutamine high-affinity transport system [Escherichia coli] gi|209775806|gb|ACI86215.1| membrane component of glutamine high-affinity transport system [Escherichia coli] gi|209911316|dbj|BAG76390.1| glutamine ABC transporter permease component [Escherichia coli SE11] gi|215263969|emb|CAS08310.1| glutamine transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|217320348|gb|EEC28772.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. TW14588] gi|218351016|emb|CAU96720.1| glutamine transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|218360164|emb|CAQ97713.1| glutamine transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI1] gi|218364484|emb|CAR02166.1| glutamine transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|218369170|emb|CAR16925.1| glutamine transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI39] gi|218426160|emb|CAR06980.1| glutamine transporter subunit ; membrane component of ABC superfamily [Escherichia coli ED1a] gi|218431285|emb|CAR12163.1| glutamine transporter subunit ; membrane component of ABC superfamily [Escherichia coli UMN026] gi|222032540|emb|CAP75279.1| glutamine transport system permease protein glnP [Escherichia coli LF82] gi|226898440|gb|EEH84699.1| glutamine transporter subunit [Escherichia sp. 3_2_53FAA] gi|227838979|gb|EEJ49445.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Escherichia coli 83972] gi|238861340|gb|ACR63338.1| glutamine transporter subunit [Escherichia coli BW2952] gi|242376602|emb|CAQ31311.1| glnP, subunit of glutamine ABC transporter [Escherichia coli BL21(DE3)] gi|253325231|gb|ACT29833.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972788|gb|ACT38459.1| glutamine ABC transporter permease protein [Escherichia coli B str. REL606] gi|253977008|gb|ACT42678.1| glutamine ABC transporter permease protein [Escherichia coli BL21(DE3)] gi|254591405|gb|ACT70766.1| glutamine transporter subunit; membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|257758200|dbj|BAI29697.1| glutamine high-affinity transport system, membrane component [Escherichia coli O103:H2 str. 12009] gi|260450043|gb|ACX40465.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli DH1] gi|281177946|dbj|BAI54276.1| glutamine ABC transporter permease component [Escherichia coli SE15] gi|281600135|gb|ADA73119.1| Glutamine transport system permease protein glnP [Shigella flexneri 2002017] gi|284920662|emb|CBG33725.1| glutamine ABC transporter, permease protein [Escherichia coli 042] gi|290761680|gb|ADD55641.1| Glutamine transport system permease protein glnP [Escherichia coli O55:H7 str. CB9615] gi|291323890|gb|EFE63312.1| glnP [Escherichia coli B088] gi|291428696|gb|EFF01721.1| glnP [Escherichia coli FVEC1412] gi|291469654|gb|EFF12138.1| glnP [Escherichia coli B354] gi|294492644|gb|ADE91400.1| glutamine ABC transporter, permease protein [Escherichia coli IHE3034] gi|299879364|gb|EFI87575.1| glutamine ABC transporter permease protein [Escherichia coli MS 196-1] gi|300297084|gb|EFJ53469.1| glutamine ABC transporter permease protein [Escherichia coli MS 185-1] gi|300316228|gb|EFJ66012.1| glutamine ABC transporter permease protein [Escherichia coli MS 175-1] gi|300358026|gb|EFJ73896.1| glutamine ABC transporter permease protein [Escherichia coli MS 198-1] gi|300401107|gb|EFJ84645.1| glutamine ABC transporter permease protein [Escherichia coli MS 84-1] gi|300406630|gb|EFJ90168.1| glutamine ABC transporter permease protein [Escherichia coli MS 45-1] gi|300412926|gb|EFJ96236.1| glutamine ABC transporter permease protein [Escherichia coli MS 115-1] gi|300420867|gb|EFK04178.1| glutamine ABC transporter permease protein [Escherichia coli MS 182-1] gi|300453255|gb|EFK16875.1| glutamine ABC transporter permease protein [Escherichia coli MS 116-1] gi|300455311|gb|EFK18804.1| glutamine ABC transporter permease protein [Escherichia coli MS 21-1] gi|300462651|gb|EFK26144.1| glutamine ABC transporter permease protein [Escherichia coli MS 187-1] gi|300523245|gb|EFK44314.1| glutamine ABC transporter permease protein [Escherichia coli MS 119-7] gi|300531148|gb|EFK52210.1| glutamine ABC transporter permease protein [Escherichia coli MS 107-1] gi|300841067|gb|EFK68827.1| glutamine ABC transporter permease protein [Escherichia coli MS 124-1] gi|300845496|gb|EFK73256.1| glutamine ABC transporter permease protein [Escherichia coli MS 78-1] gi|301075539|gb|EFK90345.1| glutamine ABC transporter permease protein [Escherichia coli MS 146-1] gi|305853550|gb|EFM53989.1| glutamine ABC transporter permease protein [Escherichia coli NC101] gi|306906420|gb|EFN36934.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|307552655|gb|ADN45430.1| glutamine transport system permease protein [Escherichia coli ABU 83972] gi|307627780|gb|ADN72084.1| glutamine ABC transporter permease protein [Escherichia coli UM146] gi|308118370|gb|EFO55632.1| glutamine ABC transporter permease protein [Escherichia coli MS 145-7] gi|308925586|gb|EFP71070.1| glutamine transport system permease protein glnP [Shigella dysenteriae 1617] gi|309701088|emb|CBJ00386.1| glutamine ABC transporter, permease protein [Escherichia coli ETEC H10407] gi|310336648|gb|EFQ01815.1| glutamine transport system permease protein glnP [Escherichia coli 1827-70] gi|312286568|gb|EFR14481.1| glutamine transport system permease protein glnP [Escherichia coli 2362-75] gi|312945328|gb|ADR26155.1| glutamine ABC transporter permease protein [Escherichia coli O83:H1 str. NRG 857C] gi|313650289|gb|EFS14701.1| glutamine transport system permease protein glnP [Shigella flexneri 2a str. 2457T] gi|315060046|gb|ADT74373.1| glutamine transporter subunit [Escherichia coli W] gi|315135460|dbj|BAJ42619.1| glutamine transport system permease protein glnP [Escherichia coli DH1] gi|315257799|gb|EFU37767.1| glutamine ABC transporter permease protein [Escherichia coli MS 85-1] gi|315287229|gb|EFU46641.1| glutamine ABC transporter permease protein [Escherichia coli MS 110-3] gi|315292587|gb|EFU51939.1| glutamine ABC transporter permease protein [Escherichia coli MS 153-1] gi|315299324|gb|EFU58576.1| glutamine ABC transporter permease protein [Escherichia coli MS 16-3] gi|315619814|gb|EFV00333.1| glutamine transport system permease protein glnP [Escherichia coli 3431] gi|320177301|gb|EFW52305.1| Glutamate transport membrane-spanning protein [Shigella dysenteriae CDC 74-1112] gi|320183305|gb|EFW58160.1| Glutamate transport membrane-spanning protein [Shigella flexneri CDC 796-83] gi|320192713|gb|EFW67354.1| Glutamate transport membrane-spanning protein [Escherichia coli O157:H7 str. EC1212] gi|320196694|gb|EFW71317.1| Glutamate transport membrane-spanning protein [Escherichia coli WV_060327] gi|320198999|gb|EFW73596.1| Glutamate transport membrane-spanning protein [Escherichia coli EC4100B] gi|320637673|gb|EFX07465.1| glutamine ABC transporter permease protein [Escherichia coli O157:H7 str. G5101] gi|320642799|gb|EFX12000.1| glutamine ABC transporter permease protein [Escherichia coli O157:H- str. 493-89] gi|320648255|gb|EFX16910.1| glutamine ABC transporter permease protein [Escherichia coli O157:H- str. H 2687] gi|320654092|gb|EFX22160.1| glutamine ABC transporter permease protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659715|gb|EFX27271.1| glutamine ABC transporter permease protein [Escherichia coli O55:H7 str. USDA 5905] gi|320664186|gb|EFX31337.1| glutamine ABC transporter permease protein [Escherichia coli O157:H7 str. LSU-61] gi|323159629|gb|EFZ45608.1| glutamine transport system permease protein glnP [Escherichia coli E128010] gi|323185034|gb|EFZ70400.1| glutamine transport system permease protein glnP [Escherichia coli 1357] gi|323190938|gb|EFZ76205.1| glutamine transport system permease protein glnP [Escherichia coli RN587/1] gi|323379395|gb|ADX51663.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli KO11] gi|323938165|gb|EGB34425.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli E1520] gi|323942683|gb|EGB38848.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli E482] gi|323947104|gb|EGB43116.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli H120] gi|323953527|gb|EGB49393.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli H252] gi|323958099|gb|EGB53808.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli H263] gi|323963057|gb|EGB58628.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli H489] gi|323967412|gb|EGB62833.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli M863] gi|323971976|gb|EGB67197.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli TA007] gi|323976804|gb|EGB71892.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli TW10509] gi|324009667|gb|EGB78886.1| glutamine ABC transporter permease protein [Escherichia coli MS 57-2] gi|324013099|gb|EGB82318.1| glutamine ABC transporter permease protein [Escherichia coli MS 60-1] gi|324018515|gb|EGB87734.1| glutamine ABC transporter permease protein [Escherichia coli MS 117-3] gi|324116234|gb|EGC10156.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli E1167] gi|326338302|gb|EGD62131.1| Glutamate transport membrane-spanning protein [Escherichia coli O157:H7 str. 1125] gi|326346280|gb|EGD70018.1| Glutamate transport membrane-spanning protein [Escherichia coli O157:H7 str. 1044] gi|327253597|gb|EGE65226.1| glutamine transport system permease protein glnP [Escherichia coli STEC_7v] gi|330910554|gb|EGH39064.1| glutamate transport membrane-spanning protein [Escherichia coli AA86] gi|331038124|gb|EGI10344.1| glutamine transport system permease protein GlnP [Escherichia coli H736] gi|331044781|gb|EGI16908.1| glutamine transport system permease protein GlnP [Escherichia coli M605] gi|331050097|gb|EGI22155.1| glutamine transport system permease protein GlnP [Escherichia coli M718] gi|331055079|gb|EGI27088.1| glutamine transport system permease protein GlnP [Escherichia coli TA206] gi|331060589|gb|EGI32553.1| glutamine transport system permease protein GlnP [Escherichia coli TA143] gi|331065535|gb|EGI37428.1| glutamine transport system permease protein GlnP [Escherichia coli TA271] gi|331070511|gb|EGI41875.1| glutamine transport system permease protein GlnP [Escherichia coli TA280] gi|331075237|gb|EGI46535.1| glutamine transport system permease protein GlnP [Escherichia coli H591] gi|331079948|gb|EGI51127.1| glutamine transport system permease protein GlnP [Escherichia coli H299] gi|332097551|gb|EGJ02531.1| glutamine transport system permease protein glnP [Shigella boydii 3594-74] gi|332104698|gb|EGJ08044.1| glutamine transporter GlnP [Shigella sp. D9] gi|332342142|gb|AEE55476.1| glutamine transport system permease protein GlnP [Escherichia coli UMNK88] gi|332759714|gb|EGJ90017.1| glutamine transport system permease protein glnP [Shigella flexneri 4343-70] gi|332760576|gb|EGJ90865.1| glutamine transport system permease protein glnP [Shigella flexneri 2747-71] gi|332763017|gb|EGJ93262.1| glutamine transport system permease protein glnP [Shigella flexneri K-671] gi|332767976|gb|EGJ98162.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella flexneri 2930-71] gi|333006603|gb|EGK26102.1| glutamine transport system permease protein glnP [Shigella flexneri VA-6] gi|333007016|gb|EGK26511.1| glutamine transport system permease protein glnP [Shigella flexneri K-218] gi|333009540|gb|EGK28992.1| glutamine transport system permease protein glnP [Shigella flexneri K-272] gi|333020469|gb|EGK39732.1| glutamine transport system permease protein glnP [Shigella flexneri K-227] gi|333020979|gb|EGK40237.1| glutamine transport system permease protein glnP [Shigella flexneri K-304] Length = 219 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 68/220 (30%), Positives = 123/220 (55%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P L+ A +TL I+ + L+IG R F I + + Sbjct: 1 MQFDW-SAIWPAIPLLIEGA-KMTLWISVLGLAGGLVIGLLAGFARTF-GGWIANHVALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R +TIR++ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A YLI+T I ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMK 217 >gi|86153193|ref|ZP_01071397.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni HB93-13] gi|88597558|ref|ZP_01100792.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 84-25] gi|218562521|ref|YP_002344300.1| putative amino acid ABC tansporter permease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85842919|gb|EAQ60130.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni HB93-13] gi|88190150|gb|EAQ94125.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 84-25] gi|112360227|emb|CAL35022.1| putative amino acid ABC tansporter permease protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926135|gb|ADC28487.1| amino acid ABC transporter permease [Campylobacter jejuni subsp. jejuni IA3902] Length = 247 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 120/204 (58%), Gaps = 15/204 (7%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL----FVI 77 ++TL + + +I +IIGF +A++R F ++ I+ Y+ I RGTP+++QL FVI Sbjct: 53 LITLLLTACAVIIGVIIGFSLAILR-FSKFKTLNFIIDEYIDIIRGTPVILQLMIFAFVI 111 Query: 78 FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 F D+ A I++L LN SAYI+EI+RS I S+ KGQ +A+ A+GL K +++ Sbjct: 112 F-------TFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMK 164 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL-IIYCELA 196 IILPQ L++EFIS+ K TSV I++ +I +Q + + Y P II+ L Sbjct: 165 EIILPQATKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNPKPIIFTGLV 224 Query: 197 FVYLILTSFCYIIQIKIESSVTQH 220 + Y+ + F Y + K+E + ++ Sbjct: 225 Y-YVSVKIFSYFAK-KLELRMNKN 246 >gi|70733437|ref|YP_263212.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68347736|gb|AAY95342.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 286 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 124/218 (56%), Gaps = 10/218 (4%) Query: 6 FNLIIDSFPQLL---------YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 F++I+D P LL +TL + S V S ++GF A+ R+ S + Sbjct: 59 FSIILDKLPNLLGLHLSPSGFLQGAALTLFLCACSIVASSLLGFVTALARLS-SSAVAFG 117 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I FY FRGTPLL+Q+ +I+ GLP +G+V + A II+L+LN+ AY+SEI R+ I+ Sbjct: 118 IASFYASFFRGTPLLIQILLIYLGLPQLGVVPGAITAGIIALSLNYGAYLSEIFRAGILG 177 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P GQ A+ A+G++ + LPQ + T P +++FIS+LK +S+ S + + E+ Sbjct: 178 VPHGQRQAALALGMSDSVIFWQVTLPQAMRTIIPPATNQFISMLKDSSLISVMGVWEVMF 237 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 AQ ++Y+ + + A +Y +L+ +IQ ++E Sbjct: 238 LAQSYGRSSYRYIEMLSTAALIYWLLSIGLELIQARME 275 >gi|302187471|ref|ZP_07264144.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae 642] Length = 229 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 122/207 (58%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +II P+L A +TL + I+ LI+ + + R + +L + Y++ F Sbjct: 3 WEVIIKWLPRLAQGA-TLTLELVAIAVTAGLILAIPMGIARASRHWPVRALP-YAYIFFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+++YGL V D F ++++TL+ +AYI+EI+R ++ + Sbjct: 61 RGTPLLVQLFLVYYGLAQFESVRQSALWPYLRDPFWCAVVTMTLHTAAYIAEILRGAMQA 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P G+ +A+ A+G+++ + + +I+LP+ S+E I +LK++++AST+T+ E+ Sbjct: 121 VPPGEVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I++ TY P+ I+ YL++T Sbjct: 181 MARTIIARTYLPVEIFFAAGMFYLVMT 207 >gi|57167933|ref|ZP_00367073.1| amino acid ABC tansporter, permease protein [Campylobacter coli RM2228] gi|305432041|ref|ZP_07401208.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Campylobacter coli JV20] gi|57021055|gb|EAL57719.1| amino acid ABC tansporter, permease protein [Campylobacter coli RM2228] gi|304445125|gb|EFM37771.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Campylobacter coli JV20] Length = 247 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 71/195 (36%), Positives = 110/195 (56%), Gaps = 21/195 (10%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL----FVIF 78 +TL + S +I +++GF +A++R F +++ I+ Y+ I RGTP+++QL FVIF Sbjct: 54 ITLLLTACSAIIGVVVGFSLAILR-FSKIKVLNFIIDEYIDIIRGTPVILQLMIFAFVIF 112 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 D+ A I +L LN SAYI+EI+RS I S+ KGQ +A+ A+GL K +++ Sbjct: 113 -------TFIDNLYAAIFALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKE 165 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 IILPQ L++EFIS+ K TSV I++ +I +Q + + Y P Sbjct: 166 IILPQATKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNPKP-------- 217 Query: 199 YLILTSFCYIIQIKI 213 LI T Y + +KI Sbjct: 218 -LIFTGLVYYVSVKI 231 >gi|323165731|gb|EFZ51517.1| glutamine transport system permease protein glnP [Shigella sonnei 53G] Length = 219 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 123/219 (56%), Gaps = 5/219 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P L+ A +TL I+ + L+IG R F I + + Sbjct: 1 MQFDW-SAIWPAIPLLIEGA-KMTLWISVLGLAGGLVIGLLAGFARTF-GGWIANHVALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGTVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R +TIR++ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 Q I++ ++ L I+ +A YLI+T I ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRM 216 >gi|150377104|ref|YP_001313700.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150031651|gb|ABR63767.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 290 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 72/225 (32%), Positives = 119/225 (52%), Gaps = 14/225 (6%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + A + TL + + + +++G IA++RI + ++S I YVW+FRG P L+ Sbjct: 63 FAPAILAGLYNTLLMTIAAMGVGIVLGVVIAIMRIS-GNPVLSSIAIGYVWVFRGAPALL 121 Query: 73 QLFVIFYG---LPHIGI----------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 QL + F P +GI V FVA ++ L L+ AY SE++RS ++S+ Sbjct: 122 QLMLWFNLALIFPTLGIPGLFEFRTVDVMTPFVAAVLGLGLSQGAYTSEVVRSGLLSVDS 181 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ IG+T+ +R I+LPQ + P+ +E I ++K TS+AS I EI AQ Sbjct: 182 GQYEAARTIGMTQMMMLRRIVLPQAMRVMVPPVGNEVIGMVKLTSLASVIQYSEILHNAQ 241 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 I + L + +F YL++ S + Q IE + + S+ Sbjct: 242 IIYFANTRVLELLLVASFWYLLVVSVLSVGQHYIERYFGRGSKSI 286 >gi|44004547|ref|NP_982216.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|218848267|ref|YP_002455140.1| amino acid ABC transporter, permease protein [Bacillus cereus AH820] gi|229113501|ref|ZP_04242950.1| Amino acid ABC transporter, permease protein [Bacillus cereus Rock1-15] gi|229164678|ref|ZP_04292542.1| Amino acid ABC transporter, permease protein [Bacillus cereus R309803] gi|296506620|ref|YP_003667854.1| amino acid ABC transporter permease protein [Bacillus thuringiensis BMB171] gi|42741613|gb|AAS45058.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|218540318|gb|ACK92714.1| amino acid ABC transporter, permease protein [Bacillus cereus AH820] gi|228618758|gb|EEK75720.1| Amino acid ABC transporter, permease protein [Bacillus cereus R309803] gi|228669919|gb|EEL25313.1| Amino acid ABC transporter, permease protein [Bacillus cereus Rock1-15] gi|296327207|gb|ADH10134.1| amino acid ABC transporter, permease protein [Bacillus thuringiensis BMB171] Length = 219 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 122/210 (58%), Gaps = 15/210 (7%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +++ N I+ P L A + V L + I+ V+S+ +GF + + + + +S + Sbjct: 1 MSFDYINSIL--MPMLEGAQMTVLLFL--IAIVVSIPMGFLLT-LAVRSNLKPLSWLAQG 55 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGI-----VFDSFVAIIISLTLNFSAYISEIIRSSII 115 Y+++ RGTPLL+QL I +GLP + + V D FVA + LN++AY +EI R ++ Sbjct: 56 YIYVLRGTPLLLQLLFICFGLPLLPVIGEYLVMDRFVAACLGFILNYAAYFAEIFRGGLL 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +I KGQ++AS +GL++ QT+R +ILPQ + +++E ++++K T++ + +PE+ Sbjct: 116 AIDKGQYEASQVLGLSKWQTMRRVILPQMFRIALPAVANESVTLIKDTALLYAVAVPELL 175 Query: 176 QTAQRIVSTTY--QPLIIYCELAFVYLILT 203 AQ V+ + P + +YLI+T Sbjct: 176 HFAQTAVNRDFTITPFFVA---GLIYLIMT 202 >gi|219852260|ref|YP_002466692.1| polar amino acid ABC transporter, inner membrane subunit [Methanosphaerula palustris E1-9c] gi|219546519|gb|ACL16969.1| polar amino acid ABC transporter, inner membrane subunit [Methanosphaerula palustris E1-9c] Length = 226 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 60/168 (35%), Positives = 102/168 (60%), Gaps = 2/168 (1%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + ++VTL + S L+ G +A+ R + S S + +V + +G PLL+ LF+I+ Sbjct: 17 SGLLVTLGLVACSAPFGLLTGIGVALGRTYGSPFTAS-VCRLFVLLVKGCPLLILLFIIY 75 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 +GLP +GI F +FVA ++ L AY SE IR ++ SI GQ A+ A+G+TR+Q IR+ Sbjct: 76 FGLPSVGIRFSAFVASVLGFILCNGAYTSEYIRGALGSIRDGQMTAALALGMTRRQAIRY 135 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++LPQ + + +++E I ++K +S+A +T E+ A +IV+ Y Sbjct: 136 VMLPQAMRRAIPGIANEMIYLIKYSSLAYMLTCIEV-TGAGKIVAAKY 182 >gi|312958334|ref|ZP_07772855.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311287398|gb|EFQ65958.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 221 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 61/182 (33%), Positives = 106/182 (58%), Gaps = 2/182 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F I+ + P L A+ VTL + I+ SL++ A + +F +S ++ YV + Sbjct: 5 FAFILSTLPAFL-NAVGVTLQVGLIAIATSLLVALINAALLVF-RTPYLSRLVALYVELA 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL+QLF +++ LP +G+ F A II++T A+++E++R+ + ++P Q ++ Sbjct: 63 RNTPLLIQLFFVYFALPALGLNISGFWAAIITMTFLGGAHLTEVLRAGVEAVPLAQIESG 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IGL+ Q +RH+ILPQ S L + FI +LK T+V S + +PEI T + ++ Sbjct: 123 KSIGLSDWQLLRHVILPQAGILSLPALFANFIFLLKETTVVSAVAVPEILYTTKSYIALY 182 Query: 186 YQ 187 Y+ Sbjct: 183 YK 184 >gi|46579648|ref|YP_010456.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|46449063|gb|AAS95715.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio vulgaris str. Hildenborough] Length = 256 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 63/173 (36%), Positives = 102/173 (58%), Gaps = 2/173 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L I+VT + S + S+ IG + R+ + I+L+ YV + RG PLLVQL Sbjct: 50 QFLPDGILVTFQVTVFSIICSIPIGLITGLGRLS-RNRGINLVASTYVEVVRGIPLLVQL 108 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F I+Y L V D +A II+L++ + AY+ E+ R+ I +IPKGQ +A+ ++G R + Sbjct: 109 FYIYYALGRFLKVPD-MLAAIIALSVCYGAYMGEVFRAGIEAIPKGQTEAARSLGFNRVE 167 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 T+ ++LPQ T P+ +EFI++LK TS+ S I + +I + + S ++Q Sbjct: 168 TMFLVVLPQAWRTILPPVGNEFIAMLKDTSLVSIIAVADILRRGREFASESFQ 220 >gi|229591026|ref|YP_002873145.1| putative inner membrane component of binding-protein-dependent amino acid transport system [Pseudomonas fluorescens SBW25] gi|229362892|emb|CAY49802.1| putative inner membrane component of binding-protein-dependent amino acid transport system [Pseudomonas fluorescens SBW25] Length = 222 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 116/200 (58%), Gaps = 16/200 (8%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTIISL 56 E+ D P LL A V T+ I +SF++S IG +A++++ + + TII++ Sbjct: 5 EFLQNAQDFLPILLQGAWV-TIQITVLSFLLSSAIGLVLALLKLSPIRALSWTASTIINV 63 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I RG P++VQLF I++ LP +G+ +F A +I + + +SAY +E R+ II+ Sbjct: 64 I--------RGLPIIVQLFYIYFVLPDMGVHLTAFYAGVIGMGIAYSAYQAENFRTGIIA 115 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + +GQ +A+ A+G+ +R +ILPQ + P + + +LK +S+ STIT+ E+ + Sbjct: 116 VEQGQREAAEALGMRSTLMMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTR 175 Query: 177 TAQRIVSTTYQPLIIYCELA 196 Q I S+T+Q + +Y +A Sbjct: 176 QGQLIASSTFQNMTVYTLVA 195 >gi|312961013|ref|ZP_07775518.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas fluorescens WH6] gi|311284671|gb|EFQ63247.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas fluorescens WH6] Length = 258 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 61/182 (33%), Positives = 101/182 (55%), Gaps = 12/182 (6%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI------------VFDSFVAIIIS 97 + ++ L + FYVW+ RGTPLLVQ+ ++ L GI V + A II+ Sbjct: 51 KNPLLHLPVRFYVWLMRGTPLLVQIVFLYTALAAGGIFRFEDIELFGLIVPGNIQAAIIA 110 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 L LN AY++EIIR+ I ++ KGQ++A ++G+ + +R I+LPQ PL +EF Sbjct: 111 LGLNEGAYMAEIIRAGIGAVDKGQYEAGRSLGMGFGKLMRRIVLPQAFRVIVPPLGNEFN 170 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +LK+T++ S I + E+ + Q + S T++ +Y +A +L LT+ Q +E+ Sbjct: 171 VMLKNTTLVSVIGVQELLLSTQMVTSATFRVFELYLVVAIYFLTLTTLWGFFQRWLENRF 230 Query: 218 TQ 219 Q Sbjct: 231 GQ 232 >gi|227517812|ref|ZP_03947861.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|229546739|ref|ZP_04435464.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|229548830|ref|ZP_04437555.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|255971345|ref|ZP_05421931.1| amino acid ABC transporter [Enterococcus faecalis T1] gi|256617763|ref|ZP_05474609.1| amino acid ABC transporter [Enterococcus faecalis ATCC 4200] gi|256761649|ref|ZP_05502229.1| amino acid ABC transporter [Enterococcus faecalis T3] gi|256854261|ref|ZP_05559625.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256960019|ref|ZP_05564190.1| arpJ [Enterococcus faecalis Merz96] gi|256964286|ref|ZP_05568457.1| arpJ [Enterococcus faecalis HIP11704] gi|257081138|ref|ZP_05575499.1| amino acid-binding/permease [Enterococcus faecalis E1Sol] gi|257083807|ref|ZP_05578168.1| amino acid ABC transporter [Enterococcus faecalis Fly1] gi|257089304|ref|ZP_05583665.1| ABC amino acid transporter [Enterococcus faecalis CH188] gi|257415457|ref|ZP_05592451.1| arpJ [Enterococcus faecalis AR01/DG] gi|257421139|ref|ZP_05598129.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|293383772|ref|ZP_06629679.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis R712] gi|293388752|ref|ZP_06633245.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis S613] gi|300860123|ref|ZP_07106211.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|307271893|ref|ZP_07553161.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|307275311|ref|ZP_07556454.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|307290910|ref|ZP_07570800.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|312901565|ref|ZP_07760838.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|312904453|ref|ZP_07763612.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|312907012|ref|ZP_07766008.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|312952839|ref|ZP_07771701.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|312978730|ref|ZP_07790457.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|227074736|gb|EEI12699.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|229306059|gb|EEN72055.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|229308088|gb|EEN74075.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|255962363|gb|EET94839.1| amino acid ABC transporter [Enterococcus faecalis T1] gi|256597290|gb|EEU16466.1| amino acid ABC transporter [Enterococcus faecalis ATCC 4200] gi|256682900|gb|EEU22595.1| amino acid ABC transporter [Enterococcus faecalis T3] gi|256709821|gb|EEU24865.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256950515|gb|EEU67147.1| arpJ [Enterococcus faecalis Merz96] gi|256954782|gb|EEU71414.1| arpJ [Enterococcus faecalis HIP11704] gi|256989168|gb|EEU76470.1| amino acid-binding/permease [Enterococcus faecalis E1Sol] gi|256991837|gb|EEU79139.1| amino acid ABC transporter [Enterococcus faecalis Fly1] gi|256998116|gb|EEU84636.1| ABC amino acid transporter [Enterococcus faecalis CH188] gi|257157285|gb|EEU87245.1| arpJ [Enterococcus faecalis ARO1/DG] gi|257162963|gb|EEU92923.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|291078848|gb|EFE16212.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis R712] gi|291081909|gb|EFE18872.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis S613] gi|295113911|emb|CBL32548.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)/amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp. 7L76] gi|300850941|gb|EFK78690.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|306497980|gb|EFM67507.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|306507945|gb|EFM77072.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|306511399|gb|EFM80401.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|310626997|gb|EFQ10280.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|310629355|gb|EFQ12638.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|310632151|gb|EFQ15434.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|311288437|gb|EFQ66993.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|311291360|gb|EFQ69916.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|315029764|gb|EFT41696.1| ABC transporter, permease protein [Enterococcus faecalis TX4000] gi|315148051|gb|EFT92067.1| ABC transporter, permease protein [Enterococcus faecalis TX4244] gi|315149654|gb|EFT93670.1| ABC transporter, permease protein [Enterococcus faecalis TX0012] gi|315152966|gb|EFT96982.1| ABC transporter, permease protein [Enterococcus faecalis TX0031] gi|315155197|gb|EFT99213.1| ABC transporter, permease protein [Enterococcus faecalis TX0043] gi|315157525|gb|EFU01542.1| ABC transporter, permease protein [Enterococcus faecalis TX0312] gi|315163047|gb|EFU07064.1| ABC transporter, permease protein [Enterococcus faecalis TX0645] gi|315171996|gb|EFU16013.1| ABC transporter, permease protein [Enterococcus faecalis TX1342] gi|315174863|gb|EFU18880.1| ABC transporter, permease protein [Enterococcus faecalis TX1346] gi|315577324|gb|EFU89515.1| ABC transporter, permease protein [Enterococcus faecalis TX0630] gi|327534474|gb|AEA93308.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis OG1RF] Length = 487 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 108/177 (61%), Gaps = 1/177 (0%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 +A I + I+G +A++++ S I+ I Y+ RGTPLLVQ+F++++G +G+ Sbjct: 294 LAFIGVLFGAILGALLALMKLANS-KILRGIAIAYIEYVRGTPLLVQIFIVYFGTGVLGL 352 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 A I+L+LN AY++EIIR+ I ++ KGQ +A+ ++G+ + Q +R+II PQ I Sbjct: 353 DLSKVAAGCIALSLNSGAYVAEIIRAGIQAVNKGQLEAARSLGMNQNQAMRYIIFPQAIK 412 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +EF++++K +SV S I + E+ A + +++P + Y ++ +Y +LT Sbjct: 413 NILPALGNEFVTVIKESSVVSVIGVSELIFQAGNVQGASFKPFLPYLIVSLIYFVLT 469 >gi|149909833|ref|ZP_01898484.1| hypothetical amino acid ABC transporter, permease protein [Moritella sp. PE36] gi|149807165|gb|EDM67121.1| hypothetical amino acid ABC transporter, permease protein [Moritella sp. PE36] Length = 315 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 121/192 (63%), Gaps = 8/192 (4%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF-YVWIFRGTPLLVQL 74 +L +++T+ ++ IS ++IIG A++RI S S F YV + RGTPLLVQ+ Sbjct: 112 VLLQGLLMTIKLSLISLFFAVIIGLVAALMRI--STNPFSRNFAFLYVEVIRGTPLLVQI 169 Query: 75 FVIFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 F++++ +G +FD F A I +L++ AYI+EIIRS I SI GQ +A+ ++G++ Sbjct: 170 FIVYF---FLGTIFDLDRFTAGIAALSVFTGAYIAEIIRSGIQSISPGQMEAARSLGMSY 226 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 + + ++ILPQ + P++ +FI+++K +S+ S I+I ++ + + +V+ ++ ++ Sbjct: 227 PKAMIYVILPQAFKRTLPPMAGQFINLIKDSSLVSVISITDLTKAGREVVAGSFATFEVW 286 Query: 193 CELAFVYLILTS 204 +A +YL+LTS Sbjct: 287 FAVAALYLVLTS 298 >gi|300718488|ref|YP_003743291.1| amino acid ABC transporter permease [Erwinia billingiae Eb661] gi|299064324|emb|CAX61444.1| Amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 308 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 74/234 (31%), Positives = 127/234 (54%), Gaps = 25/234 (10%) Query: 2 KYEWFNLIIDSFPQL-LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++EW +I DSF Q + +++TL + IS V+ G +A++R+ + ++S + Sbjct: 46 RFEW-QVIADSFTQQSILQGVLMTLQLTAISVVLGFTGGTVLALMRLSSNPVLVS-VSWA 103 Query: 61 YVWIFRGTPLLVQLFVIFY----------GLPHIGIVFDS--------FVAIIISLTLNF 102 Y W FRG P+LVQLF+ + LP +G ++ + F A +I+L ++ Sbjct: 104 YTWFFRGVPMLVQLFLWYNIAALYPKVSVSLPWVGELWSASSNSLISPFSAAVIALVMHQ 163 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +EI+R+ I S+ GQ +A+ A+G + R+ +LPQ + P +E I LK+ Sbjct: 164 AAYAAEIVRAGIQSVGNGQLEAAKALGYRPSEIFRYTVLPQAMRAILPPAGNEIIGQLKT 223 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 T+V S I + ++ +AQ I TYQ PL++ L YL++TS + Q +E Sbjct: 224 TAVVSVIALQDVLFSAQIIYQRTYQVIPLLLVATL--WYLLMTSVLSVGQFYVE 275 >gi|256957248|ref|ZP_05561419.1| amino acid ABC transporter [Enterococcus faecalis DS5] gi|257077778|ref|ZP_05572139.1| his/Glu/Gln/Arg/opine ABC transporter permease [Enterococcus faecalis JH1] gi|294781304|ref|ZP_06746650.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|307267969|ref|ZP_07549357.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|256947744|gb|EEU64376.1| amino acid ABC transporter [Enterococcus faecalis DS5] gi|256985808|gb|EEU73110.1| his/Glu/Gln/Arg/opine ABC transporter permease [Enterococcus faecalis JH1] gi|294451640|gb|EFG20096.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|306515610|gb|EFM84137.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|315032477|gb|EFT44409.1| ABC transporter, permease protein [Enterococcus faecalis TX0017] gi|315034288|gb|EFT46220.1| ABC transporter, permease protein [Enterococcus faecalis TX0027] gi|323480074|gb|ADX79513.1| his/Glu/Gln/Arg/opine amino ABC transporter [Enterococcus faecalis 62] Length = 487 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 108/177 (61%), Gaps = 1/177 (0%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 +A I + I+G +A++++ S I+ I Y+ RGTPLLVQ+F++++G +G+ Sbjct: 294 LAFIGVLFGAILGALLALMKLANS-KILRGIAIAYIEYVRGTPLLVQIFIVYFGTGVLGL 352 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 A I+L+LN AY++EIIR+ I ++ KGQ +A+ ++G+ + Q +R+II PQ I Sbjct: 353 DLSKVAAGCIALSLNSGAYVAEIIRAGIQAVNKGQLEAARSLGMNQNQAMRYIIFPQAIK 412 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +EF++++K +SV S I + E+ A + +++P + Y ++ +Y +LT Sbjct: 413 NILPALGNEFVTVIKESSVVSVIGVSELIFQAGNVQGASFKPFLPYLIVSLIYFVLT 469 >gi|120602869|ref|YP_967269.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris DP4] gi|120563098|gb|ABM28842.1| amino acid ABC transporter membrane protein, PAAT family [Desulfovibrio vulgaris DP4] gi|311233446|gb|ADP86300.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris RCH1] Length = 262 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 63/173 (36%), Positives = 102/173 (58%), Gaps = 2/173 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L I+VT + S + S+ IG + R+ + I+L+ YV + RG PLLVQL Sbjct: 56 QFLPDGILVTFQVTVFSIICSIPIGLITGLGRLS-RNRGINLVASTYVEVVRGIPLLVQL 114 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F I+Y L V D +A II+L++ + AY+ E+ R+ I +IPKGQ +A+ ++G R + Sbjct: 115 FYIYYALGRFLKVPD-MLAAIIALSVCYGAYMGEVFRAGIEAIPKGQTEAARSLGFNRVE 173 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 T+ ++LPQ T P+ +EFI++LK TS+ S I + +I + + S ++Q Sbjct: 174 TMFLVVLPQAWRTILPPVGNEFIAMLKDTSLVSIIAVADILRRGREFASESFQ 226 >gi|83647882|ref|YP_436317.1| arginine/histidine ABC transporter permease [Hahella chejuensis KCTC 2396] gi|83635925|gb|ABC31892.1| ABC-type arginine/histidine transport system, permease component [Hahella chejuensis KCTC 2396] Length = 240 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 124/218 (56%), Gaps = 12/218 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + VT+ + +S +I L+I + ++R + I+ + Y ++FRGTPLL+QL++I Sbjct: 24 WDGLTVTVQMVFLSLLIGLVIAIPLGILRTS-KNPWINKPIWLYTYMFRGTPLLIQLYLI 82 Query: 78 FYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +YGLP + V DSF+ +++ LN +AY +EIIR +I P+G+ +A+ A Sbjct: 83 YYGLPAVPGVKDSFIWPLLANAFYPAMLAFILNTAAYTTEIIRGAIQQTPQGEIEAAKAY 142 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G++ ++R IILP + S+E I +L ++++AS +TI ++ A+ I S Y P Sbjct: 143 GMSWWLSMRRIILPNAFRRALPAYSNEVIFMLHASAIASVVTIIDLTGAARYIYSKYYAP 202 Query: 189 LIIYCELAFVYLILT-SFCYIIQIKIESSVTQHTYSVD 225 + +A +YL LT + YI + ++E ++ H V Sbjct: 203 FEAFTFVALIYLCLTFTIIYIFK-RLEHNLMAHLRPVG 239 >gi|13473259|ref|NP_104826.1| glutamine ABC transporter (integral membrane protein) [Mesorhizobium loti MAFF303099] gi|14024007|dbj|BAB50612.1| glutamine ABC transporter (integral membrane protein) [Mesorhizobium loti MAFF303099] Length = 221 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 124/209 (59%), Gaps = 4/209 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FNLI F +L + ++++L +A IS I +IG +AV + + ++ I+ YV Sbjct: 7 FNLIWRHFDKL-WGGLLLSLELAVISIAIGTVIGLVLAVWYVS-AGRVVRAIIAAYVEFI 64 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 R PL++ ++++FYG+P + + + + + +++L++ AY+ E+ RS + ++P+GQ DA Sbjct: 65 RNVPLILLVYLVFYGVPTVVDLAYSAPTSFVLTLSVYSGAYLVEVFRSGLEAVPRGQLDA 124 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 AIGLT Q + H+ LP + + LS+ FIS+ K TS+AS I++PE+ AQ I Sbjct: 125 GKAIGLTPWQRLIHVRLPTMLRITLPALSNTFISLFKDTSIASVISVPELTFGAQWINFN 184 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKI 213 T++ + +Y +YL LT + + +++ Sbjct: 185 TFRIVEVYLVTTAMYL-LTGYILLFGLRL 212 >gi|329577884|gb|EGG59305.1| ABC transporter, permease protein [Enterococcus faecalis TX1467] Length = 487 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 108/177 (61%), Gaps = 1/177 (0%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 +A I + I+G +A++++ S I+ I Y+ RGTPLLVQ+F++++G +G+ Sbjct: 294 LAFIGVLFGAILGALLALMKLANS-KILRGIAIAYIEYVRGTPLLVQIFIVYFGTGVLGL 352 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 A I+L+LN AY++EIIR+ I ++ KGQ +A+ ++G+ + Q +R+II PQ I Sbjct: 353 DLSKVAAGCIALSLNSGAYVAEIIRAGIQAVNKGQLEAARSLGMNQNQAMRYIIFPQAIK 412 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +EF++++K +SV S I + E+ A + +++P + Y ++ +Y +LT Sbjct: 413 NILPALGNEFVTVIKESSVVSVIGVSELIFQAGNVQGASFKPFLPYLIVSLIYFVLT 469 >gi|292656557|ref|YP_003536454.1| putative glutamine ABC transporter permease [Haloferax volcanii DS2] gi|291370810|gb|ADE03037.1| ABC-type transport system permease protein (probable substrate glutamine) [Haloferax volcanii DS2] Length = 276 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 114/203 (56%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F L+ PQ + A ++V L I I ++S+ G F+ + R+ + I + I YV F Sbjct: 55 FALMRTILPQFVDAYLLV-LQIVVIGGILSVTAGVFVGLARVSKT-AITNGIATAYVQFF 112 Query: 66 RGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLL Q+FVI++G+P + + F II+LTLN +AY+ E +R I ++P G Sbjct: 113 RGTPLLFQIFVIYFGIPTLWPGTFPVQNWGFPTAIIALTLNHAAYVGEAVRGGIGAVPDG 172 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++G+ Q +R +++PQ + + ++ + ++K TS+ + I IPE+ Q + Sbjct: 173 QMEAARSLGMGYIQGMREVVVPQAWRNALAAIGNDQVILVKDTSLLTIIAIPELMQAFRS 232 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S T+ P +A YL +T Sbjct: 233 VNSATFDPWTPLVLVAIAYLSIT 255 >gi|317053831|ref|YP_004117856.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316951826|gb|ADU71300.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 245 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 119/205 (58%), Gaps = 3/205 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y+W L + ++ + AA +TL + ++FV+++ + +A + + + + H Sbjct: 1 MSYQW--LTLWNYGETFLAAAWLTLQVTLLAFVLAVTL-GLLAALAKAAALAPLRWLSHC 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV R TP+L+Q+F+IF+GLP +GI +F A +++L +N AY+SE R+ I S+PKG Sbjct: 58 YVEFIRNTPVLLQIFIIFFGLPSLGITMSAFTAGVLALGINVGAYLSETFRAGIQSVPKG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A++ +G+ R+Q ++LPQ + + I +L TS+ S I +PE+ TA Sbjct: 118 QLEAAWILGIPRRQVFLSVVLPQAARAVWPAIINNLIQLLLGTSLLSAIALPELTGTATV 177 Query: 181 IVSTTYQPLIIYCELAFVYLILTSF 205 I + T + + +A VYL+L++ Sbjct: 178 INARTLLYIQTFSVVALVYLLLSNL 202 >gi|291286085|ref|YP_003502901.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Denitrovibrio acetiphilus DSM 12809] gi|290883245|gb|ADD66945.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Denitrovibrio acetiphilus DSM 12809] Length = 222 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 106/165 (64%), Gaps = 1/165 (0%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 +VT+ + ++ ++++I + ++R+ S +ISL Y+ IFRGT LLVQL+ IF+ L Sbjct: 19 LVTVLLTILASALAVVIAVVMGLMRMSRSR-LISLPAAVYIEIFRGTSLLVQLYWIFFVL 77 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 P G+ FD F A +++ +N AY +E++R +I+++PKGQW+A+ ++GL+ + + II Sbjct: 78 PLFGVTFDKFTAGFVAVGMNLGAYGAELVRGAILAVPKGQWEAALSLGLSPFKRMVRIIF 137 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 PQ + P + I +LK T++ S I++ ++ +++I ++T+ Sbjct: 138 PQALLIMLPPWGNLLIELLKGTALVSLISVADLMFESKQINASTF 182 >gi|315145819|gb|EFT89835.1| ABC transporter, permease protein [Enterococcus faecalis TX2141] Length = 487 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 108/177 (61%), Gaps = 1/177 (0%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 +A I + I+G +A++++ S I+ I Y+ RGTPLLVQ+F++++G +G+ Sbjct: 294 LAFIGVLFGAILGALLALMKLANS-KILRGIAIAYIEYVRGTPLLVQIFIVYFGTGVLGL 352 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 A I+L+LN AY++EIIR+ I ++ KGQ +A+ ++G+ + Q +R+II PQ I Sbjct: 353 DLSKVAAGCIALSLNSGAYVAEIIRAGIQAVNKGQLEAARSLGMNQNQAMRYIIFPQAIK 412 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +EF++++K +SV S I + E+ A + +++P + Y ++ +Y +LT Sbjct: 413 NILPALGNEFVTVIKESSVVSVIGVSELIFQAGNVQGASFKPFLPYLIVSLIYFVLT 469 >gi|266624830|ref|ZP_06117765.1| glutamine ABC transporter, permease protein [Clostridium hathewayi DSM 13479] gi|288863291|gb|EFC95589.1| glutamine ABC transporter, permease protein [Clostridium hathewayi DSM 13479] Length = 230 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 65/212 (30%), Positives = 121/212 (57%), Gaps = 6/212 (2%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHF 60 +FN I D+ + + + TL I + +I +++GF +A+IR + +T I++ + Sbjct: 10 YFNFIEDNRWKYITDGLQNTLKITFFAVLIGIVLGFLVAIIRSTYENTHKLKILNAVCTV 69 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + RGTP++VQL ++++ + + I I++ +N AY++EI RS I SI +G Sbjct: 70 YLTVIRGTPVVVQLMIVYF-VIFVAINPGMVTTAILAFGINSGAYVAEIFRSGISSIERG 128 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A ++G QT+ +II+PQ L++EFI +LK TSVA I + ++ + Sbjct: 129 QFEAGRSLGFNYAQTMWYIIMPQAFKNVVPTLANEFIVLLKETSVAGYIGLQDLTKGGDI 188 Query: 181 IVSTTYQPLIIYCELAFVYLILTS-FCYIIQI 211 I S TY + +A +YL++ F Y++++ Sbjct: 189 IKSRTYSAFMPLIAVALIYLVMVMIFSYLVKL 220 >gi|167759818|ref|ZP_02431945.1| hypothetical protein CLOSCI_02181 [Clostridium scindens ATCC 35704] gi|167662437|gb|EDS06567.1| hypothetical protein CLOSCI_02181 [Clostridium scindens ATCC 35704] Length = 230 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 67/220 (30%), Positives = 120/220 (54%), Gaps = 9/220 (4%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHF 60 + N I D + + + VTL + + +I +++GF +A++R + T I++ I Sbjct: 10 YNNFIADERWKYIAEGLGVTLRVTFFAVIIGIVLGFLVAIVRSTYDKTGKLRILNAICKL 69 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + RGTP++VQL +I++ + V VA++ + LN AY++EI RS I+S+ G Sbjct: 70 YLTVIRGTPVVVQLLIIYFVIFGSSDVSKVLVAVM-AFGLNSGAYVAEIFRSGIMSVDNG 128 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A ++G QT+ +II+PQ L +EFI +LK TSV+ I + ++ + Sbjct: 129 QFEAGRSLGFNYVQTMIYIIMPQAFKNVLPALGNEFIVLLKETSVSGYIALQDLTKGGDI 188 Query: 181 IVSTTYQPLIIYCELAFVY----LILTSFCYIIQIKIESS 216 I S TY + +A +Y LI T +++ ++ SS Sbjct: 189 IRSRTYDAFMPLIAVALIYLAMVLIFTKLVNMLERRLRSS 228 >gi|312867750|ref|ZP_07727956.1| ABC transporter, permease protein [Streptococcus parasanguinis F0405] gi|311096813|gb|EFQ55051.1| ABC transporter, permease protein [Streptococcus parasanguinis F0405] Length = 213 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 116/207 (56%), Gaps = 3/207 (1%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 ++ P LL A +TL + ++S+ +G +A + + I+ ++ +WI RGTP Sbjct: 5 LEILPSLLKGA-SLTLQVFAFVLILSIPLGIVVAFL-LQLRSKILHGLLTINIWIMRGTP 62 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+QL I+Y LP IGI D A I + TLN++AY +EI R I++IP GQ++A+ + Sbjct: 63 LLLQLIFIYYVLPSIGIRIDRLPAAITAFTLNYAAYFAEIFRGGIVAIPTGQYEAAKVLK 122 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+ QTIR+IILPQ + + +E +S++K TS+ + I ++ ++ + Sbjct: 123 LSSWQTIRYIILPQVVKIVLPSVFNEVMSLIKDTSLVYALGISDLILASRTAANRDASLA 182 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESS 216 ++ AF YLIL II ++E + Sbjct: 183 PMFLAGAF-YLILIGIVTIIAKQVEKN 208 >gi|319440318|ref|ZP_07989474.1| putative ABC transport system, permease protein [Corynebacterium variabile DSM 44702] Length = 323 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 75/233 (32%), Positives = 123/233 (52%), Gaps = 27/233 (11%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W + F + A + TL + ++ I +I+G +AV+R+ + ++ Y+ Sbjct: 50 YGWDTYVDYLFDSRIAEAALHTLALTVLAMAIGIILGAVMAVLRMS-PNPVMRGFSWVYL 108 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDS-----------------FVAIIISLTLNFSAY 105 WIFRGTP+ VQL +F+GL +G ++ S FV + L LN SAY Sbjct: 109 WIFRGTPVYVQL--VFWGL--LGSIYHSISVGFAEVSVEGFLKNFFVLAFVGLGLNESAY 164 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 ++EI+R+ + S+P+GQ +AS A+G+T QT+R +LPQ + P +E IS+LK+TS+ Sbjct: 165 MAEIVRAGVQSVPEGQTEASKALGMTWWQTMRRTVLPQAMRIIIPPTGNELISMLKTTSL 224 Query: 166 ASTITIP---EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 I +P EI+ + I + P+ + A YL +TS + Q +E Sbjct: 225 --VIAVPYAGEIYGRSTDIAYAMFDPVPMLLVAATWYLAITSILMVGQHYLEK 275 >gi|257481838|ref|ZP_05635879.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289624457|ref|ZP_06457411.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|298485185|ref|ZP_07003279.1| Amino acid ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160297|gb|EFI01324.1| Amino acid ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330866607|gb|EGH01316.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330886063|gb|EGH19964.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] gi|330986785|gb|EGH84888.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009473|gb|EGH89529.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 215 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 109/184 (59%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ ++F+ +IG + +R T + Y+ +F+GTPLL+QLF++F+G+ Sbjct: 19 TVALSLVAFIGGGLIGLLVMGMRTS-EKTGPRVTAKLYIELFQGTPLLMQLFLVFFGVAL 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ + A ++LTL SAY++EI R + SI KGQW+AS ++ +T + +R++ILPQ Sbjct: 78 MGMNISPWAAAALALTLFTSAYLAEIWRGCVESISKGQWEASASLAMTPFEQMRYVILPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T+V S I E+ +T + + T++P ++Y +A Y IL Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGSMLANATFEPFMVYGFVALGYFIL- 196 Query: 204 SFCY 207 CY Sbjct: 197 --CY 198 >gi|239816391|ref|YP_002945301.1| polar amino acid ABC transporter inner membrane subunit [Variovorax paradoxus S110] gi|239802968|gb|ACS20035.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 217 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 121/207 (58%), Gaps = 3/207 (1%) Query: 12 SFPQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 FP+ L+ A TL ++ I+FV I+G IA++R S + F + IF+GTP Sbjct: 5 GFPEFLFILEAAKWTLALSAIAFVGGAILGLIIALMRTSESAWARGVSTTF-IQIFQGTP 63 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+QLF++F+G P +G+ + +VA ++L LN +A++ EI R I +IP+GQW+A+ A+ Sbjct: 64 LLLQLFLVFFGAPVLGLDINPWVAAGVALILNSAAFLGEIWRGCIEAIPRGQWEAAQALN 123 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L +R ++LPQ + + P + I+K TS+A+ I E+ + Q + + T+QPL Sbjct: 124 LKYAARMRDVVLPQALKIALAPTVGYVVQIIKGTSLAAIIGFVEVTRAGQVVNNATFQPL 183 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESS 216 +++ +A +Y + ++ ++E Sbjct: 184 VVFSVVAAIYFAICWPLSLLAARMERG 210 >gi|239630683|ref|ZP_04673714.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526966|gb|EEQ65967.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 485 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 60/180 (33%), Positives = 104/180 (57%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL A ++ +IG +A++++ S I + Y+ RGTPLLVQ F++F+G Sbjct: 292 TLIFAVLTVFFGTVIGTLLALMKLSHS-WFAKAIANVYIEFIRGTPLLVQAFIVFFGTQI 350 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ +FVA I++ +N AY++EIIR I S+P GQ +A+ ++GL + Q +R++ILPQ Sbjct: 351 LGLDLSAFVAGAIAMAINSGAYVAEIIRGGINSVPIGQTEAARSLGLHQGQAMRYVILPQ 410 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +EF++ +K +SV S I E+ + +++P + +A +Y I+T Sbjct: 411 ATKNIWPALGNEFVTDIKESSVLSVIGATELMFEGTVVQGASFKPFLPLVVVAILYFIMT 470 >gi|227532776|ref|ZP_03962825.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227189610|gb|EEI69677.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 482 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 60/180 (33%), Positives = 104/180 (57%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL A ++ +IG +A++++ S I + Y+ RGTPLLVQ F++F+G Sbjct: 289 TLIFAVLTVFFGTVIGTLLALMKLSHS-WFAKAIANVYIEFIRGTPLLVQAFIVFFGTQI 347 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ +FVA I++ +N AY++EIIR I S+P GQ +A+ ++GL + Q +R++ILPQ Sbjct: 348 LGLDLSAFVAGAIAMAINSGAYVAEIIRGGINSVPIGQTEAARSLGLHQGQAMRYVILPQ 407 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +EF++ +K +SV S I E+ + +++P + +A +Y I+T Sbjct: 408 ATKNIWPALGNEFVTDIKESSVLSVIGATELMFEGTVVQGASFKPFLPLVVVAILYFIMT 467 >gi|29375478|ref|NP_814632.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis V583] gi|227555005|ref|ZP_03985052.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|255973964|ref|ZP_05424550.1| amino acid ABC transporter [Enterococcus faecalis T2] gi|257086232|ref|ZP_05580593.1| amino acid ABC transporter [Enterococcus faecalis D6] gi|257418488|ref|ZP_05595482.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|307278411|ref|ZP_07559486.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|307286701|ref|ZP_07566787.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|29342938|gb|AAO80702.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis V583] gi|227175864|gb|EEI56836.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|255966836|gb|EET97458.1| amino acid ABC transporter [Enterococcus faecalis T2] gi|256994262|gb|EEU81564.1| amino acid ABC transporter [Enterococcus faecalis D6] gi|257160316|gb|EEU90276.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|306502179|gb|EFM71463.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|306504917|gb|EFM74112.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|315027079|gb|EFT39011.1| ABC transporter, permease protein [Enterococcus faecalis TX2137] gi|315165246|gb|EFU09263.1| ABC transporter, permease protein [Enterococcus faecalis TX1302] gi|315167972|gb|EFU11989.1| ABC transporter, permease protein [Enterococcus faecalis TX1341] gi|315574194|gb|EFU86385.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B] gi|315581663|gb|EFU93854.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A] Length = 487 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 108/177 (61%), Gaps = 1/177 (0%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 +A I + I+G +A++++ S I+ I Y+ RGTPLLVQ+F++++G +G+ Sbjct: 294 LAFIGVLFGAILGALLALMKLANS-KILRGIAIAYIEYVRGTPLLVQIFIVYFGTGVLGL 352 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 A I+L+LN AY++EIIR+ I ++ KGQ +A+ ++G+ + Q +R+II PQ I Sbjct: 353 DLSKVAAGCIALSLNSGAYVAEIIRAGIQAVNKGQLEAARSLGMNQNQAMRYIIFPQAIK 412 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +EF++++K +SV S I + E+ A + +++P + Y ++ +Y +LT Sbjct: 413 NILPALGNEFVTVIKESSVVSVIGVSELIFQAGNVQGASFKPFLPYLIVSLIYFVLT 469 >gi|86152052|ref|ZP_01070264.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 260.94] gi|121612320|ref|YP_001000576.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Campylobacter jejuni subsp. jejuni 81-176] gi|157415158|ref|YP_001482414.1| amino acid ABC transporter permease [Campylobacter jejuni subsp. jejuni 81116] gi|167005508|ref|ZP_02271266.1| putative polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 81-176] gi|85840837|gb|EAQ58087.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 260.94] gi|87249317|gb|EAQ72277.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 81-176] gi|157386122|gb|ABV52437.1| putative polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 81116] gi|307747801|gb|ADN91071.1| Putative amino-acid ABC tansporter permease protein [Campylobacter jejuni subsp. jejuni M1] gi|315932617|gb|EFV11548.1| Amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni 327] Length = 247 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 120/204 (58%), Gaps = 15/204 (7%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL----FVI 77 ++TL + + +I +IIGF +A++R F ++ I+ Y+ I RGTP+++QL FVI Sbjct: 53 LITLLLTACAVIIGVIIGFSLAILR-FSKFKTLNFIIDEYIDIIRGTPVILQLMIFAFVI 111 Query: 78 FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 F D+ A I++L LN SAYI+EI+RS I S+ KGQ +A+ A+GL K +++ Sbjct: 112 F-------TFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMK 164 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL-IIYCELA 196 IILPQ L++EFIS+ K TSV I++ +I +Q + + Y P II+ L Sbjct: 165 EIILPQATKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNPKPIIFTGLV 224 Query: 197 FVYLILTSFCYIIQIKIESSVTQH 220 + Y+ + F Y + K+E + ++ Sbjct: 225 Y-YVSVKIFSYFAK-KLELRMNKN 246 >gi|315039015|ref|YP_004032583.1| amino acid ABC transporter, permease protein [Lactobacillus amylovorus GRL 1112] gi|325957440|ref|YP_004292852.1| amino acid ABC transporter permease [Lactobacillus acidophilus 30SC] gi|312277148|gb|ADQ59788.1| Amino acid ABC transporter, permease protein [Lactobacillus amylovorus GRL 1112] gi|325334005|gb|ADZ07913.1| amino acid ABC transporter, permease protein [Lactobacillus acidophilus 30SC] Length = 219 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 96/161 (59%), Gaps = 5/161 (3%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I++FYVWI RGTPLL+QL +FYGLP I IVF + A + + LN++AY +EI R S Sbjct: 56 IVNFYVWIMRGTPLLLQLIFVFYGLPIIHIVFPRYQAALFAFVLNYAAYFAEIFRGGFQS 115 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ++A+ + L R QT+ I++PQ I + +E I+++K +S+ I + ++ + Sbjct: 116 IDQGQFEAAQVLHLNRWQTMTKIVIPQVIKIVLPSIGNEVINLVKDSSLVYVIGLGDLLR 175 Query: 177 TAQRIVS--TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 ++ T PL++ + +YL L S C I ++E Sbjct: 176 AGNVAMARDVTLVPLVL---VGVIYLFLISICAFILKRLEK 213 >gi|255525600|ref|ZP_05392534.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] gi|296185487|ref|ZP_06853897.1| ABC transporter, permease protein [Clostridium carboxidivorans P7] gi|255510690|gb|EET86996.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] gi|296050321|gb|EFG89745.1| ABC transporter, permease protein [Clostridium carboxidivorans P7] Length = 221 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 131/221 (59%), Gaps = 8/221 (3%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++WF I+ FP +L ++ +T+ I+ +S V +L++ I+++R ++ IS + Y+ Sbjct: 5 FQWF---INLFPIVL-PSLKLTIEISLVSLVFTLLLSIVISIVR-YYKVWGISQLFGVYI 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPK 119 FR TPL+ QLF++++GLP + S F A +++LTLN +++++E +R+++ S+ Sbjct: 60 TFFRATPLVAQLFILYFGLPCVIPALKSMTAFQATVVALTLNTASFMAETLRAALESVEV 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A Y++ +T+ QT+ ++LPQ + L ++FI I+K +++ T+ + +I A+ Sbjct: 120 GQLEACYSMSMTKYQTMMRVVLPQAFVVALPSLGNQFIGIIKGSALGFTVGLADIMAKAK 179 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + T + Y + +YL++ F IQ +E + ++ Sbjct: 180 MEAALTLRFFEAYLCVTLIYLVIVIFVEKIQRLLEKRIQKY 220 >gi|86357910|ref|YP_469802.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86282012|gb|ABC91075.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 222 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 113/205 (55%), Gaps = 3/205 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F + D P+L + ++ TL +A +++L IG R + + S ++ Sbjct: 1 MGYTFDFGAVFDRAPELFWGSLG-TLGLAVAGMILALAIGILGVAARTSKNKLVQSPVIA 59 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 F V I R TP LVQ+F I++ LP +GI + II+L +N AY EIIR + S+ K Sbjct: 60 F-VEIVRNTPFLVQIFFIYFALPLMGIRLNPTATAIIALGINGGAYAIEIIRGGVESVNK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A +A+GL + R I+L + L+S+F+ + +TSV ++I E+ AQ Sbjct: 119 GQVEAGFALGLHKADVFRLIVLKPALRAIYPSLTSQFVMLTLTTSVCTSIAAYELTSAAQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTS 204 RI S T++ +Y + +YL+++S Sbjct: 179 RIESDTFRSFEVYFSVTAIYLVISS 203 >gi|308187411|ref|YP_003931542.1| ABC transport system, permease protein [Pantoea vagans C9-1] gi|308057921|gb|ADO10093.1| putative ABC transport system, permease protein [Pantoea vagans C9-1] Length = 307 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 75/235 (31%), Positives = 129/235 (54%), Gaps = 27/235 (11%) Query: 2 KYEWFNLIIDSF--PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 ++EW +I ++F P +L +++TL + IS V+ G +A++R+ S+ ++ + Sbjct: 44 RFEW-QVIAENFTAPSIL-QGVLMTLQLTAISVVLGFAFGTVLALMRLS-SNPVLVAVSW 100 Query: 60 FYVWIFRGTPLLVQLFV----------IFYGLPHIGIVFDS--------FVAIIISLTLN 101 Y W FRG P+LVQLF+ I +P +G ++ + F A +I+L ++ Sbjct: 101 AYTWFFRGVPMLVQLFLWYNIAALYPRIALSIPGLGELWSAQSNALVSPFSAAVIALVMH 160 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 SAY +EI+R+ I S+ GQ +A+ A+G Q RH +LPQ + P +E I LK Sbjct: 161 QSAYAAEIVRAGIQSVGNGQIEAARALGYRPAQIFRHTVLPQAMRAIMPPAGNEIIGQLK 220 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 +T+V S I++ ++ +AQ I TY+ PL++ L YL++TS + Q +E Sbjct: 221 TTAVVSVISLQDVLFSAQIIYQRTYEVIPLLLVATL--WYLLMTSVLSVGQYYVE 273 >gi|119387802|ref|YP_918836.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119378377|gb|ABL73140.1| amino acid ABC transporter membrane protein 2, PAAT family [Paracoccus denitrificans PD1222] Length = 218 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 61/199 (30%), Positives = 120/199 (60%), Gaps = 1/199 (0%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 +A+ TL ++ I+F+ + G +A+ R + I ++ +F+GTPLL+QLF+++ Sbjct: 15 SAVRWTLILSAIAFLGGALGGLAVALARTA-QGRLRRRIAAGFIQVFQGTPLLMQLFLVY 73 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 +GL +G+ D +A ++LTL+ SAY+ EI R +I ++P GQ +A+ A+ L+ K +RH Sbjct: 74 FGLAVVGLPIDPLLAAAVALTLHASAYLGEIWRGAIEAVPPGQTEAATALSLSYKDRMRH 133 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 ++LPQ + + P + ++K TS+AS I E+ + Q I + T++P +++ +A + Sbjct: 134 VVLPQAMRLATAPTVGFLVQLIKGTSLASIIGFTELTRAGQIINNATFKPFLVFGTVAAL 193 Query: 199 YLILTSFCYIIQIKIESSV 217 Y +L ++ ++E+ + Sbjct: 194 YFVLCWPLSLLARRMEARM 212 >gi|220932712|ref|YP_002509620.1| polar amino acid ABC transporter, inner membrane subunit [Halothermothrix orenii H 168] gi|219994022|gb|ACL70625.1| polar amino acid ABC transporter, inner membrane subunit [Halothermothrix orenii H 168] Length = 216 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 61/174 (35%), Positives = 104/174 (59%), Gaps = 3/174 (1%) Query: 33 VISLIIGFFIAVIRIF---FSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 ++SLI+G +AV F + + I ++ Y + R PL+V LF++ YGLP +GI Sbjct: 20 ILSLILGLIVAVPLAFGQIYGNFAIKFLVSIYERVVRSIPLIVILFLVHYGLPRVGIRLT 79 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 FVA ++ L L +AY S+I R +I SI GQ A+ ++G+++ Q +ILPQ I Sbjct: 80 FFVASVVGLGLRSAAYQSQIFRGAIQSIDNGQMKAALSLGMSKLQAFVTVILPQAIRLII 139 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 P ++EF +LK +S+A + + E+ + + I+ST+ +P+ ++ +A +Y ILT Sbjct: 140 GPWTNEFTIVLKDSSLAYALGVVELLRQGRYIISTSNKPMPVFLTVAAIYFILT 193 >gi|301067834|ref|YP_003789857.1| amino acid ABC transporter permease/periplasmic protein [Lactobacillus casei str. Zhang] gi|300440241|gb|ADK20007.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus casei str. Zhang] Length = 482 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 60/180 (33%), Positives = 104/180 (57%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL A ++ +IG +A++++ S I + Y+ RGTPLLVQ F++F+G Sbjct: 289 TLIFAVLTVFFGTVIGTLLALMKLSHS-WFAKAIANVYIEFIRGTPLLVQAFIVFFGTQI 347 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ +FVA I++ +N AY++EIIR I S+P GQ +A+ ++GL + Q +R++ILPQ Sbjct: 348 LGLDLSAFVAGAIAMAINSGAYVAEIIRGGINSVPIGQTEAARSLGLHQGQAMRYVILPQ 407 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +EF++ +K +SV S I E+ + +++P + +A +Y I+T Sbjct: 408 ATKNIWPALGNEFVTDIKESSVLSVIGATELMFEGTVVQGASFKPFLPLVVVAILYFIMT 467 >gi|116496232|ref|YP_807966.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus casei ATCC 334] gi|116106382|gb|ABJ71524.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus casei ATCC 334] Length = 482 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 60/180 (33%), Positives = 104/180 (57%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL A ++ +IG +A++++ S I + Y+ RGTPLLVQ F++F+G Sbjct: 289 TLIFAVLTVFFGTVIGTLLALMKLSHS-WFAKAIANVYIEFIRGTPLLVQAFIVFFGTQI 347 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ +FVA I++ +N AY++EIIR I S+P GQ +A+ ++GL + Q +R++ILPQ Sbjct: 348 LGLDLSAFVAGAIAMAINSGAYVAEIIRGGINSVPIGQTEAARSLGLHQGQAMRYVILPQ 407 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +EF++ +K +SV S I E+ + +++P + +A +Y I+T Sbjct: 408 ATKNIWPALGNEFVTDIKESSVLSVIGATELMFEGTVVQGASFKPFLPLVVVAILYFIMT 467 >gi|120608916|ref|YP_968594.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax citrulli AAC00-1] gi|120587380|gb|ABM30820.1| amino acid ABC transporter membrane protein 2, PAAT family [Acidovorax citrulli AAC00-1] Length = 217 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 100/180 (55%), Gaps = 1/180 (0%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 TL ++ ++F + G + R+ + + Y+ +F+ TPLL+Q+F++F+G Sbjct: 20 ATLLLSLMAFALGGAAGLVVLFARVG-RHPGLQRVSRTYIQVFQNTPLLMQMFLVFFGAS 78 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 G + A I LTL SAY++E+ R + +IP+GQW+AS ++ + Q +RH++LP Sbjct: 79 MAGFDVSPWAAAAIGLTLYTSAYLAEVWRGCVQAIPRGQWEASSSLAMGYFQQMRHVVLP 138 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + + P + I+K T+VAS I ++ + + + T+QP +IY +A Y +L Sbjct: 139 QAVRLAVAPTVGFSVQIVKGTAVASIIGFEDLTKLGSMLANATFQPFLIYGLVAAGYFLL 198 >gi|327184148|gb|AEA32595.1| amino acid ABC transporter permease [Lactobacillus amylovorus GRL 1118] Length = 215 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 96/161 (59%), Gaps = 5/161 (3%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I++FYVWI RGTPLL+QL +FYGLP I IVF + A + + LN++AY +EI R S Sbjct: 52 IVNFYVWIMRGTPLLLQLIFVFYGLPIIHIVFPRYQAALFAFVLNYAAYFAEIFRGGFQS 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ++A+ + L R QT+ I++PQ I + +E I+++K +S+ I + ++ + Sbjct: 112 IDQGQFEAAQVLHLNRWQTMTKIVIPQVIKIVLPSIGNEVINLVKDSSLVYVIGLGDLLR 171 Query: 177 TAQRIVS--TTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 ++ T PL++ + +YL L S C I ++E Sbjct: 172 AGNVAMARDVTLVPLVL---VGVIYLFLISICAFILKRLEK 209 >gi|254454756|ref|ZP_05068193.1| ABC transporter permease protein [Octadecabacter antarcticus 238] gi|198269162|gb|EDY93432.1| ABC transporter permease protein [Octadecabacter antarcticus 238] Length = 225 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 111/199 (55%), Gaps = 4/199 (2%) Query: 3 YEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 YEW F +I++ LL+ ++ TL I + L +G +A+ R+ ++ F Sbjct: 2 YEWDFTSVIEN-SDLLWQGLLGTLAITGTALAFGLPLGLILALSRLS-PRRWLAWPAGFV 59 Query: 62 VWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + FR TP LVQLF F+ LP + I ++A I+ ++ SA+ +E+ R+ I+SI KG Sbjct: 60 IEFFRTTPPLVQLFWFFFALPILMDIQMTPYLAAAITFSIQSSAFFAEVFRAGIVSIEKG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ AIG+ R Q +R IILPQ + + I ++K+T++ +T++ ++ A Sbjct: 120 QWEAARAIGMQRPQAMRRIILPQAVKRMIPAFTERAIELMKTTTLVATVSYADLLYQANE 179 Query: 181 IVSTTYQPLIIYCELAFVY 199 + T++P+ ++ A +Y Sbjct: 180 LAQKTFRPIEVFTVTALIY 198 >gi|306823388|ref|ZP_07456763.1| ABC superfamily ATP binding cassette transporter, permease protein [Bifidobacterium dentium ATCC 27679] gi|309802620|ref|ZP_07696724.1| ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] gi|304553095|gb|EFM41007.1| ABC superfamily ATP binding cassette transporter, permease protein [Bifidobacterium dentium ATCC 27679] gi|308220684|gb|EFO76992.1| ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] Length = 327 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 76/239 (31%), Positives = 127/239 (53%), Gaps = 31/239 (12%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++EW + F + + I TL + IS VI++++ +AV+R + ++ + FY Sbjct: 50 RFEWNVVWKYLFNENVLEGIKYTLLLTVISMVIAIVLAVVLAVMRKSI-NPVLRGVSWFY 108 Query: 62 VWIFRGTPLLVQLFVIFYGL-----PHIGI----------------VFDSFVAIIISLTL 100 +W FRGTP+ QL +F+GL P IGI V +F A + L L Sbjct: 109 IWFFRGTPVYTQL--VFWGLFAVLIPRIGIGIPFTSIEFWSVDSQSVITAFNAAWLGLAL 166 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N +AY++EI+R+ + ++ GQ +A+ A+G+ R +R I+LPQ + P +EFI +L Sbjct: 167 NEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRSLIMRRIVLPQAMRIIIPPTGNEFIGML 226 Query: 161 KSTSVASTITIPEIFQTAQRIVSTT-YQP---LIIYCELAFVYLILTSFCYIIQIKIES 215 K+TS+ + + Q A ++T Y+P LI+ C YL++TS IIQ ++E Sbjct: 227 KTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVAC---IWYLVITSILMIIQSRLEK 282 >gi|209546927|ref|YP_002278845.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538171|gb|ACI58105.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 225 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 123/220 (55%), Gaps = 7/220 (3%) Query: 6 FNLIIDS-FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 F+L + + F L ++TL ++ + +SL+IG F + + + Y+W+ Sbjct: 4 FDLFVTALFGWPLAKGAMLTLVLSILVMAVSLVIGSFFG-LAAGSKKKLPRWSIASYIWL 62 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDS-----FVAIIISLTLNFSAYISEIIRSSIISIPK 119 FRG P L+ L I+ GLP + VF + FVA ++LTL AY++EI+RS+ ++ + Sbjct: 63 FRGAPALLILLFIWNGLPQLSQVFRAAWFSPFVAAFLALTLIEVAYLTEILRSAFAAVGR 122 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ + + A+G R Q + LPQ + + L +EFIS+LKSTS+A+ I++ E+ Q Sbjct: 123 GQREGAEALGFHRWQIFFLVTLPQAMRIAVPALVNEFISLLKSTSLATVISLKELMTVTQ 182 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 ++T+++ L Y Y+ + S ++QIK+E +++ Sbjct: 183 FAIATSFRFLEWYGAALVYYMAMVSVLTVVQIKVERRLSR 222 >gi|153011069|ref|YP_001372283.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151562957|gb|ABS16454.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 222 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 61/180 (33%), Positives = 105/180 (58%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++C + V+ LI+ A+ + + LI+ Y+ I R TP LVQ+F IF+GLP Sbjct: 23 TIELSCAAMVLGLIVSIVCALGKTS-GPKPVRLIIDAYIEIIRNTPFLVQIFFIFFGLPS 81 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 G+ A +++L +NF AY +EIIR+ I SI KGQ +A A+GL++ Q R++I+ Sbjct: 82 AGLRLSPNSAALLALVVNFGAYGTEIIRAGIESIHKGQVEAGTALGLSKLQVFRYVIMKP 141 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + T L+S+FI ++ ++SV S I+ E+ + S T+ +Y + +YL+++ Sbjct: 142 ALRTVYPSLTSQFIYLMLTSSVVSVISANELAAAGNDLQSATFASFEVYIVITLMYLVMS 201 >gi|77456537|ref|YP_346042.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77380540|gb|ABA72053.1| amino acid ABC transporter membrane protein 2, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 229 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 121/209 (57%), Gaps = 15/209 (7%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFYVW 63 + +II P+L A +TL + I+ + L++ + + R S + + + + Y++ Sbjct: 3 WEVIIKWLPKLAQGA-TLTLELVAIAVIAGLLLAIPLGIAR---SSKLWYVRALPYAYIF 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSI 114 FRGTPLLVQLF+++YGL V D F ++TL+ +AYI+EI+R +I Sbjct: 59 FFRGTPLLVQLFLVYYGLAQFDAVRNSSMWPYLRDPFWCATATMTLHTAAYIAEILRGAI 118 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IP G+ +A+ A+G++R + + +IILP+ S+E I +LK++++AST+T+ E+ Sbjct: 119 QAIPPGEIEAARALGMSRPKALFYIILPRAARIGLPAYSNEVILMLKASALASTVTLLEL 178 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I++ TY P+ I+ YL++ Sbjct: 179 TGMARTIIARTYLPVEIFFAAGVFYLVMA 207 >gi|319892895|ref|YP_004149770.1| Glutamate ABC transporter, periplasmic glutamine- binding protein [Staphylococcus pseudintermedius HKU10-03] gi|317162591|gb|ADV06134.1| Glutamate ABC transporter, periplasmic glutamine- binding protein [Staphylococcus pseudintermedius HKU10-03] Length = 486 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 65/187 (34%), Positives = 109/187 (58%), Gaps = 6/187 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVI 77 I T+ I+ I V+ + G A+++I TI L Y+ RGTPLLVQ+F++ Sbjct: 285 GIKSTIVISLIGVVLGAVFGSMFALMKI---STIRPLKWFASAYIEFLRGTPLLVQVFLV 341 Query: 78 FYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 F+G + G+ +F+ I+L +N SAYI+EIIR+ I ++ KGQ +A+ ++GL+ QT+ Sbjct: 342 FFGTTAVLGLDISAFICGAIALVINCSAYIAEIIRAGINAVDKGQMEAARSLGLSYSQTM 401 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 + +I+PQ I L +EF++++K +S+ S I + EI AQ + ++ P A Sbjct: 402 KSVIMPQAIKKILPALGNEFVTVIKESSIVSVIGVSEIMFNAQVVQGASFDPFTPLLIAA 461 Query: 197 FVYLILT 203 ++ ILT Sbjct: 462 VLFFILT 468 >gi|303230413|ref|ZP_07317174.1| ABC transporter, permease protein [Veillonella atypica ACS-049-V-Sch6] gi|302514952|gb|EFL56933.1| ABC transporter, permease protein [Veillonella atypica ACS-049-V-Sch6] Length = 218 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 56/171 (32%), Positives = 102/171 (59%), Gaps = 4/171 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ + C+ +V+S+ G +A++R+ ++ I+ +V++ RGTPL++Q+ ++Y Sbjct: 15 GLKVTIALFCVVWVLSIPGGIILALLRLS-KLPVVDKIVEAFVYLMRGTPLMLQILFMYY 73 Query: 80 GLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 LP + I D A +++ LN++AY+ EI R I SIP+GQ++ + +G T QT+ Sbjct: 74 ALPIMTDGAIQMDDATAAVVTFVLNYAAYLCEIFRGGIQSIPRGQYEGAKVLGFTYGQTM 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 R IILPQ PL++E I++LK TS+ + + +I + + IV + Sbjct: 134 RTIILPQMFKRVLPPLANETINLLKDTSLVYVLAMNDILRITKSIVQRDFD 184 >gi|320155823|ref|YP_004188202.1| histidine ABC transporterpermease HisM [Vibrio vulnificus MO6-24/O] gi|319931135|gb|ADV85999.1| histidine ABC transporter, permease protein HisM [Vibrio vulnificus MO6-24/O] Length = 225 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 113/203 (55%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LI++SFP L + T + +S VI L I +AV R + ++SL Y++ F Sbjct: 3 FSLIVESFPIYL-DGLWTTAWLVAVSLVIGLGIAIPLAVARNS-RNYVVSLPAWGYIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G++ T R I+LP + + S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMSHWMTYRRIVLPSALRRALPAYSNEVIFMLHGSAVAGIVTILDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFESFLTAGLFYMSLT 203 >gi|312963938|ref|ZP_07778409.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311281973|gb|EFQ60583.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 256 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 75/220 (34%), Positives = 127/220 (57%), Gaps = 14/220 (6%) Query: 6 FNLIIDSFPQLLY-----------AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII 54 F++I+D P L+ AA+ V L + I+ S ++GF A+ R+ S Sbjct: 29 FSIILDKLPNLVGLHLAPNGFLQGAALTVFLCLCAIA--ASSVLGFITALGRLSKSAVAF 86 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 I FY FRGTPLL+Q+ +I+ GLP +G+V + VA II+L+LN+ AY+SEI R+ I Sbjct: 87 G-IATFYASFFRGTPLLIQILLIYLGLPQLGLVPGAIVAGIIALSLNYGAYLSEIFRAGI 145 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 + +P GQ +A+ A+G+ H+ LPQ + T P +++FIS+LK +S+ S + + E+ Sbjct: 146 LGVPHGQREAALALGMRDSAIFWHVTLPQAMRTIIPPATNQFISMLKDSSLISVMGVWEV 205 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 AQ ++Y+ + + A +Y +++ +IQ ++E Sbjct: 206 MFLAQSYGRSSYRYIEMLTTAAIIYWVMSLGLELIQARME 245 >gi|170741315|ref|YP_001769970.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168195589|gb|ACA17536.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 227 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 111/198 (56%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F +++ +P L A++ TL ++ I+ + +G A+ R + + YV Sbjct: 7 FGAVLERWPSFLDGALL-TLELSGIATAVGGALGGITAIGR-RSRHAALRRLCEVYVEAI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLLVQ+F++++GL +G F + ++LT+N AY +EI+R+ + +IP+GQ +A+ Sbjct: 65 RNTPLLVQIFLVYFGLASLGFRFSALTVAALALTINVGAYTTEIVRAGLDAIPRGQIEAA 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 + L+R Q RH++L I L+S+F+ ++ ++SV S I+ E+ A I S T Sbjct: 125 EGLALSRAQIYRHVVLLPAIERVYPSLTSQFVLLMLASSVTSQISAEELTAVANYIQSDT 184 Query: 186 YQPLIIYCELAFVYLILT 203 Y+ Y +A +Y+ L+ Sbjct: 185 YRAFETYIVVALIYVALS 202 >gi|117617583|ref|YP_855306.1| glutamine/glutamate ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117558990|gb|ABK35938.1| glutamine/glutamate ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 221 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 113/209 (54%), Gaps = 10/209 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++W + ++ + P ++ VTL + I + SL + ++ + +I Sbjct: 1 MSFDW-SFVLTTLPAF-GQSVWVTLQLGAIVILTSLAVALLNVTLQSLHRPWLNGVI-RA 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TPLL+QLF +++GLP +G+ F +I++T Y++E +R+ I ++P Sbjct: 58 YVELARNTPLLIQLFFLYFGLPALGLSLSGFATAVIAMTFLGGGYLTEALRAGIQAVPPS 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A AIGL+R Q +RH+ LPQ S L + FI +LK T+VAS + +PE+ T + Sbjct: 118 QLEAGRAIGLSRWQLLRHVQLPQAWLASLPALFANFIFLLKETTVASAVAVPELLYTTKN 177 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYII 209 ++ Y+ Y LA +LT C +I Sbjct: 178 YIALYYK---TYEMLA----VLTLMCVLI 199 >gi|91778289|ref|YP_553497.1| ABC amino acid transporter, inner membrane subunit [Burkholderia xenovorans LB400] gi|91690949|gb|ABE34147.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia xenovorans LB400] Length = 220 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 68/202 (33%), Positives = 108/202 (53%), Gaps = 11/202 (5%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q + A + TL I ++IGF IAV+++F + I+ Y+ +FRGTP LVQL Sbjct: 14 QPIAAGLATTLGTWAAGVAIGMLIGFLIAVLQLFCGRWVRG-ILRVYIELFRGTPFLVQL 72 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F+++YG P G+ + A ++ L L SAY +E RS S+P G +A+ +GLTR Q Sbjct: 73 FLLYYGGPSFGLTLEPMTAGVLGLGLYGSAYFAEAFRSGFQSVPPGHLEAASCLGLTRWQ 132 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + I +PQ + L++ I + K T+V S +T+PE+ I S T+ Sbjct: 133 AVLRIQVPQMLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATF-------- 184 Query: 195 LAFVY-LILTSFCYIIQIKIES 215 AFV L++ CY+ +++ S Sbjct: 185 -AFVETLLVLCVCYLALVELTS 205 >gi|158424305|ref|YP_001525597.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158331194|dbj|BAF88679.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 224 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 69/196 (35%), Positives = 110/196 (56%), Gaps = 2/196 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F I P+LL A V++L IA ++F L IG A IR F ++ I+ YV F Sbjct: 7 FGQIWPYLPRLLEGA-VISLQIAVLAFCGGLFIGTLCAAIRSF-GPRWLARIVGVYVVFF 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 TP LVQ++ +++ LP GI+ SF A++I +TLN AY++EI R+ S + +A+ Sbjct: 65 TNTPQLVQIYFLYFALPDSGILLSSFAAVVIGMTLNAGAYLTEIQRAGFESRRVSEMEAA 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +G +R Q IR++ILP PLS++FI + TS+A+ + E+ A I S T Sbjct: 125 EVMGFSRLQQIRYVILPHVARVLFPPLSNQFIIVTLGTSMAAVFGVEELTGEAFNINSQT 184 Query: 186 YQPLIIYCELAFVYLI 201 ++ + I+ A +Y++ Sbjct: 185 FRSIEIFSVTAGIYVV 200 >gi|320177859|gb|EFW52845.1| Glutamate transport membrane-spanning protein [Shigella boydii ATCC 9905] Length = 219 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 68/220 (30%), Positives = 123/220 (55%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P L+ A +TL I+ + L+IG R F I + + Sbjct: 1 MQFDW-SAIWPAIPLLIEGA-KMTLWISVLGLAGGLVIGLLAGFARTF-GGWIANHVALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEMIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R +TIR++ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A YLI+T I ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMK 217 >gi|296534282|ref|ZP_06896760.1| ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296265398|gb|EFH11545.1| ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 287 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 113/215 (52%), Gaps = 13/215 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A + TL + + + + +G AV+R+ + + + M Y W+FRGTP+++QL + F Sbjct: 70 AGLYNTLWMTFAAMALGIALGVVTAVMRMSPNPVLQGVAMG-YTWLFRGTPVILQLLLWF 128 Query: 79 YG---LPHIGI---------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P +G V +A ++ L +N AY SE+IR+ ++S+ GQ++A+ Sbjct: 129 NMALIFPRLGFGDFSVRTVDVMTPALAALLGLGINQGAYTSEVIRAGMLSVDAGQYEAAK 188 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 AIG+TR + +R II PQ + PL +EFI ++K TS+AS I EI AQ I Sbjct: 189 AIGMTRLRALRRIIFPQAMKVVIPPLGNEFIGMVKLTSLASVIQFAEILHAAQNIYYANS 248 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + + + A YLI+ S +Q+ +E + T Sbjct: 249 RVIELLIVAALWYLIIVSVLTPLQMLLERRFARGT 283 >gi|307727664|ref|YP_003910877.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307588189|gb|ADN61586.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 220 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 65/197 (32%), Positives = 106/197 (53%), Gaps = 11/197 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + TL I ++IGF IAV+++F + +L + Y+ +FRGTP LVQLF+++Y Sbjct: 19 GLATTLGTWAAGVAIGMLIGFVIAVLQLFCGRWVRAL-LRLYIELFRGTPFLVQLFLLYY 77 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G P G+ + A ++ L L SAY +E RS S+P G +A+ +G+TR Q + I Sbjct: 78 GGPSFGLTLEPMTAGVLGLGLYGSAYFAEAFRSGFQSVPPGHLEAASCLGMTRTQAVLRI 137 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +PQ + L++ I + K T+V S +T+PE+ I S T+ AFV Sbjct: 138 QMPQMLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATF---------AFVE 188 Query: 200 -LILTSFCYIIQIKIES 215 L++ CY+ +++ S Sbjct: 189 TLLMLCVCYLALVELTS 205 >gi|262191302|ref|ZP_06049495.1| amino acid ABC transporter permease protein [Vibrio cholerae CT 5369-93] gi|262032798|gb|EEY51343.1| amino acid ABC transporter permease protein [Vibrio cholerae CT 5369-93] Length = 225 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 112/203 (55%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LIIDS P L + + T+ + +S VI L+ +A+ R SL Y++ Sbjct: 3 FSLIIDSLPIYL-SGLWTTVWLVSLSLVIGLLCAIPLAITRNS-KQKWFSLPAWGYIYFL 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQWFPVKDTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G++R QT + IILP + S S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFEAFLSAGLFYMALT 203 >gi|238019979|ref|ZP_04600405.1| hypothetical protein VEIDISOL_01855 [Veillonella dispar ATCC 17748] gi|237863503|gb|EEP64793.1| hypothetical protein VEIDISOL_01855 [Veillonella dispar ATCC 17748] Length = 218 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 56/171 (32%), Positives = 102/171 (59%), Gaps = 4/171 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ + CI +++S+ G +A++R+ T++ I+ +V++ RGTPL++Q+ ++Y Sbjct: 15 GLKVTVSLFCIVWILSIPGGILLALVRLS-KFTVLDKIVEAFVYLMRGTPLMLQILFVYY 73 Query: 80 GLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 LP I + D A +++ LN++AY+ EI R I SI +GQ++ + +G T QT+ Sbjct: 74 ALPIITDGAVQMDDATAAVLTFVLNYAAYLCEIFRGGIQSISRGQYEGAKVLGFTYAQTM 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 R IILPQ PL++E I++LK TS+ + + +I + + IV + Sbjct: 134 RKIILPQMFKRVLPPLANETINLLKDTSLVYVLAMNDILRITKSIVQRDFD 184 >gi|194016790|ref|ZP_03055403.1| ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus ATCC 7061] gi|194011396|gb|EDW20965.1| ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus ATCC 7061] Length = 218 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 124/213 (58%), Gaps = 8/213 (3%) Query: 11 DSFPQL--LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 D PQ+ + + VTL I +S + I+G + + +I +I L FY IFRGT Sbjct: 6 DVIPQMPFILEGLKVTLSIVVVSLFLGFILGILLTLCKISVFKPLIWL-ADFYTSIFRGT 64 Query: 69 PLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PL++QL +I++GLP + G D + A + + +LN +AY+SEIIR+ I +I KGQ +A+ A Sbjct: 65 PLVLQLLIIYFGLPQLLGFQIDQYWAAVAAFSLNSAAYVSEIIRAGINAIDKGQKEAAVA 124 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY- 186 +G+ + ++ ++LPQ + L +E I++ K +++ + I + ++ + A + + TY Sbjct: 125 LGIPYAKMMKDLLLPQAFKNISPALVNETITLTKESAIVTVIGLGDVMRRAYQAGAVTYN 184 Query: 187 --QPLIIYCELAFV-YLILTSFCYIIQIKIESS 216 +PLI + +V L+LT ++ K++S+ Sbjct: 185 YLEPLIFAGLIYYVIVLVLTFVGKSVERKLKSN 217 >gi|222151827|ref|YP_002560987.1| glutamine-binding periplasmic protein homolog [Macrococcus caseolyticus JCSC5402] gi|222120956|dbj|BAH18291.1| glutamine-binding periplasmic protein homolog [Macrococcus caseolyticus JCSC5402] Length = 483 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 63/186 (33%), Positives = 110/186 (59%), Gaps = 4/186 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF-YVWIFRGTPLLVQLFVIF 78 I T+ I+ I ++ + G +A +++ S II+ + + Y+ RGTPLLVQ+F+++ Sbjct: 282 GIGGTIVISLIGVLLGSLFGGILAFMKL--SKNIIARTISWIYIEFIRGTPLLVQVFLVY 339 Query: 79 YGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 +G + GI +F+ I+L +N +AYI+EIIR+ I ++ KGQ +A+ ++GL+ Q + Sbjct: 340 FGTTAVLGIDLSAFICGAIALVINCAAYIAEIIRAGIKAVDKGQMEAARSLGLSHSQAMN 399 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 +I+PQ I L +EFI+++K +S+ S I + E+ AQ + ++ P A Sbjct: 400 KVIMPQAIKKILPALGNEFITVIKESSIVSVIGVSELMFNAQVVQGASFDPFTPLLIAAV 459 Query: 198 VYLILT 203 VY ILT Sbjct: 460 VYFILT 465 >gi|160936636|ref|ZP_02084003.1| hypothetical protein CLOBOL_01526 [Clostridium bolteae ATCC BAA-613] gi|158440427|gb|EDP18172.1| hypothetical protein CLOBOL_01526 [Clostridium bolteae ATCC BAA-613] Length = 222 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 114/204 (55%), Gaps = 2/204 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 LY ++TL I I V+ ++G +A+++I +I FY IFRGTPLLVQL + Sbjct: 15 LYHGALLTLKITAICAVLGFLLGIVLALVKISKYKPLI-WFGRFYTSIFRGTPLLVQLCI 73 Query: 77 IFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 + +GLP + G + + I++ TLN +AY+SEI R I+ + KGQ++AS ++G+ Sbjct: 74 VHFGLPQLLGFTLTTTQSGILTFTLNSAAYVSEIFRGGIMGVDKGQYEASMSLGIGYGDM 133 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 ++ II+PQ + L +E I++LK +S+ S I E+ + A +I T++ Y + Sbjct: 134 MKDIIIPQAVKHILPSLVNEAIALLKESSILSYIGAVELLRAADQITVLTFRFFEPYLVI 193 Query: 196 AFVYLILTSFCYIIQIKIESSVTQ 219 A +Y + + ++E V + Sbjct: 194 AVIYYVFVMILSAVASRLERWVNR 217 >gi|18313023|ref|NP_559690.1| glutamine transport system permease protein, putative [Pyrobaculum aerophilum str. IM2] gi|18160525|gb|AAL63872.1| glutamine transport system permease protein, putative [Pyrobaculum aerophilum str. IM2] Length = 229 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 119/212 (56%), Gaps = 12/212 (5%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 I T+ +A +SF I L +G + ++R FF + + YV FRGTPLLVQ+F+++ Sbjct: 15 GGIPTTMSLALLSFAIGLALGSILLLVR-FFLPKPLPWLASAYVEAFRGTPLLVQIFIVY 73 Query: 79 YG----LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +G L GI D F A +I+L LN +AY +EI RS++ +IP Q+ + A T+ Q Sbjct: 74 FGVGGYLKGYGINIDPFTAGVIALGLNSAAYQAEIFRSAVQAIPVEQYLTAEAYAFTKTQ 133 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTI--TIPEIFQTAQRIVSTTYQPLIIY 192 T R+IILPQ + + L +E + ++K +S+ + I T P+IF+ A ++ + Y Sbjct: 134 TFRYIILPQALRIALPALMNELVLLIKDSSLVAVIGVTPPDIFRRADYYSASKFAYFEAY 193 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 A VY ++ CY + +KI S + Y++ Sbjct: 194 MAAATVYFLI---CYAM-VKI-SHYIERKYAI 220 >gi|322832887|ref|YP_004212914.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321168088|gb|ADW73787.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 290 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 119/215 (55%), Gaps = 22/215 (10%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG--- 80 T+ ++ ++ + ++ G IAV+R+ + + S+ M Y WIFRGTPL++QL + F Sbjct: 75 TIVMSVLAMALGIVFGVIIAVMRMSQNPVLRSVAMG-YTWIFRGTPLILQLLLWFNLALI 133 Query: 81 LPHIGI----------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P I I + F A ++ L++N AY SE++R+ +IS+ GQ++A+ +IG+ Sbjct: 134 FPVIAIPGVFSIQTVDIMTPFTAALLGLSINQGAYTSEVVRAGLISVDLGQYEAAKSIGM 193 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 TR +R IILPQ + P+ +EFIS++K+TS+AS I E+ AQ T Y Sbjct: 194 TRLHALRRIILPQAMRVIIPPIGNEFISMVKTTSLASMIQYSEVLYNAQ----TIYFANA 249 Query: 191 IYCELAFV----YLILTSFCYIIQIKIESSVTQHT 221 EL FV YL++ + + Q ++E + T Sbjct: 250 RVMELLFVAGIWYLVVVTVLSLGQNRLERYFGRGT 284 >gi|261823410|ref|YP_003261516.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261607423|gb|ACX89909.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 223 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 62/185 (33%), Positives = 110/185 (59%), Gaps = 11/185 (5%) Query: 9 IIDSFPQ-LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIF 65 ++ FPQ L+Y + TL +A +S ++++G +A++R I+++ I+ Y+ +F Sbjct: 8 LLKVFPQVLMY--LPTTLFLAVVSMFFAMVLGLILALVR---ESKIVAVVKIVELYISLF 62 Query: 66 RGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RG P LVQLF+I++GLP + D+ A II +L SAY++EI R+ + S+ GQ Sbjct: 63 RGIPSLVQLFIIYFGLPQLFPSLSNLDAMTAAIIGFSLKTSAYMAEIFRAGLASVDFGQT 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A +IG+++ Q R I+LPQ + + + FIS++K TSVA + + E+F + I Sbjct: 123 EAGLSIGMSKAQVYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFAEGKMIA 182 Query: 183 STTYQ 187 + + + Sbjct: 183 AESLR 187 >gi|167755200|ref|ZP_02427327.1| hypothetical protein CLORAM_00705 [Clostridium ramosum DSM 1402] gi|167705250|gb|EDS19829.1| hypothetical protein CLORAM_00705 [Clostridium ramosum DSM 1402] Length = 234 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 118/225 (52%), Gaps = 13/225 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR-----------IFFSDTII 54 F + +D+F L + +T+ +A + + LIIG IR I + Sbjct: 8 FTIFLDNF-DLFWYGTKITIILALVGTIAGLIIGLLFGAIRATTIDIKDKKIIVLIKKAL 66 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 +I Y+W FRGTP+LVQ ++GL +++ A I+ +++N AY++EI+RS I Sbjct: 67 KIISEIYIWFFRGTPMLVQAMFFYHGLRPF-FQWNALTAGIMIISINTGAYMAEIVRSGI 125 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+ +GQ + + ++G+TR QT+++IILPQ I S + ++FI +K +S+ + I + E+ Sbjct: 126 QSVDRGQSEGALSLGMTRVQTMKYIILPQAIRNSFPAIGNQFIINIKDSSMLNVIGVVEL 185 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 F + I +T + VYL LTS I+ IE + Sbjct: 186 FFQSSSIAGSTMSYSATFLITCLVYLCLTSIATILLNIIEKRINN 230 >gi|149375978|ref|ZP_01893744.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Marinobacter algicola DG893] gi|149359615|gb|EDM48073.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Marinobacter algicola DG893] Length = 223 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 114/206 (55%), Gaps = 10/206 (4%) Query: 2 KYEWFNLIIDSFPQLLYA---AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 +++W I++ P LL ++++ I FV+ +I G +++ + +F + Sbjct: 6 QFDW-QAAINAIPYLLKGVPYTLLISFGGLAIGFVLGIIFGL-LSINKKWF----LRWPA 59 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 Y+ IFRGTP+LVQ+ IFYGLP +G D A I ++ LN AYISE++R + SI Sbjct: 60 TAYIEIFRGTPILVQVLFIFYGLPDLVGGPIDPLTAGIAAIALNSGAYISEVVRGGVQSI 119 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ +A ++GL+R QT ++ PQ PL ++ I +K TS+ S I + E+ + Sbjct: 120 DKGQTEAGLSLGLSRSQTFWSVVWPQAFRRMIPPLGNQAIVSIKDTSLFSVIGVGELVRQ 179 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 Q ++ T+ +Y +A +YL +T Sbjct: 180 GQVYIANTFTAFEVYFVVAIMYLAIT 205 >gi|224437619|ref|ZP_03658572.1| putative ABC-type amino-acid transporter permease protein [Helicobacter cinaedi CCUG 18818] Length = 252 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 106/187 (56%), Gaps = 10/187 (5%) Query: 24 TLPIACISFVISLI---IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG 80 TL ++C++ +I+LI IG +A R I+ YV IF+ TPL++Q+F +++ Sbjct: 53 TLSVSCLALLIALIFGTIGGVMATSRF----KILKAYTRIYVEIFQNTPLVIQIFFLYFA 108 Query: 81 LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 L +GI D F ++ + AY+SE++RS I+S+PKGQ++AS + G T Q +R+II Sbjct: 109 LHPLGIHLDVFSVGVLGVGAYHGAYVSEVVRSGILSVPKGQFEASASQGFTYTQQMRYII 168 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LPQTI PL+++ ++++K+TSV + EI A T Y A +Y Sbjct: 169 LPQTIKIILPPLTNQMVNLIKNTSVLLIVAGGEIMYVADSYAGDTSNYAPAYLFTALLYF 228 Query: 201 ILTSFCY 207 I+ CY Sbjct: 229 IV---CY 232 >gi|170759870|ref|YP_001787408.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A3 str. Loch Maree] gi|169406859|gb|ACA55270.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A3 str. Loch Maree] Length = 228 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 58/163 (35%), Positives = 95/163 (58%), Gaps = 10/163 (6%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD----------SFVAIIISLTL 100 + I+ I Y+ RGTP+LVQL++I+YGLP IGI F F A I++L++ Sbjct: 46 NKILKYIAVSYIEFIRGTPVLVQLYIIYYGLPTIGIRFPEVPILGSNFPDFFAGILALSI 105 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N AY++EIIR+ I ++ KGQ +A+ ++G++ ++++I+PQ L +EFI+I+ Sbjct: 106 NSGAYVAEIIRAGIQAVDKGQMEAARSLGMSESMAMKNVIIPQAFKNILPALGNEFITII 165 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 K +S+ S I I E+ A + ++P A +Y ILT Sbjct: 166 KESSIVSIIGIHELMYNADTVRGNIFRPFEPLLVAAVMYFILT 208 >gi|77459026|ref|YP_348532.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77383029|gb|ABA74542.1| amino acid ABC transporter membrane protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 281 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 125/212 (58%), Gaps = 2/212 (0%) Query: 4 EWFNLI-IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 +W NL+ + P +T+ + S SL++GF A+ R+ S + I FY Sbjct: 60 KWPNLVGLHLGPNGFLQGAALTIFLCFCSIWFSLLLGFVTALARLS-SSAVAFGIASFYA 118 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FRGTPLL+Q+ +I+ GLP +G+V + A II+L+LN+ AY+SEI R+ I+++ GQ Sbjct: 119 SFFRGTPLLIQILLIYLGLPQLGVVPGAISAGIIALSLNYGAYLSEIFRAGILAVAPGQR 178 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A+GL T HIILPQ + T P +S+FIS+LK +S+ S + + E+ AQ Sbjct: 179 EAAAALGLRPAATFIHIILPQAMRTIIPPTTSQFISMLKDSSLISVMGVWEVMFLAQSYG 238 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 ++Y+ + + A +Y +L+ +IQ ++E Sbjct: 239 RSSYRYIEMLTTAAAIYWLLSIGLELIQHRLE 270 >gi|37680520|ref|NP_935129.1| amino acid ABC transporter, permease protein [Vibrio vulnificus YJ016] gi|37199268|dbj|BAC95100.1| amino acid ABC transporter, permease protein [Vibrio vulnificus YJ016] Length = 227 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 113/203 (55%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LI++SFP L + T + +S VI L I +AV R + ++SL Y++ F Sbjct: 5 FSLIVESFPIYL-DGLWTTAWLVAVSLVIGLGIAIPLAVARNS-RNYVVSLPAWGYIYFF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I +PKG Sbjct: 63 RGTPLLVQLYLIYYGMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G++ T R I+LP + + S+E I +L ++VA +TI ++ A+ Sbjct: 123 EVEAAKAYGMSHWMTYRRIVLPSALRRALPAYSNEVIFMLHGSAVAGIVTILDLTGAARL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 183 VNSRYYAPFESFLTAGLFYMSLT 205 >gi|15641863|ref|NP_231495.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587301|ref|ZP_01677073.1| amino acid ABC transporter, permease protein [Vibrio cholerae 2740-80] gi|121727112|ref|ZP_01680286.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52] gi|147674940|ref|YP_001217395.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|153213068|ref|ZP_01948606.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587] gi|153818853|ref|ZP_01971520.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC 8457] gi|153823969|ref|ZP_01976636.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33] gi|153825190|ref|ZP_01977857.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-2] gi|153830548|ref|ZP_01983215.1| amino acid ABC transporter, permease protein [Vibrio cholerae 623-39] gi|183179516|ref|ZP_02957727.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-3] gi|227081990|ref|YP_002810541.1| amino acid ABC transporter, permease protein [Vibrio cholerae M66-2] gi|229508042|ref|ZP_04397547.1| amino acid ABC transporter permease protein [Vibrio cholerae BX 330286] gi|229511719|ref|ZP_04401198.1| amino acid ABC transporter permease protein [Vibrio cholerae B33] gi|229518857|ref|ZP_04408300.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9] gi|229520321|ref|ZP_04409747.1| amino acid ABC transporter permease protein [Vibrio cholerae TM 11079-80] gi|229523880|ref|ZP_04413285.1| amino acid ABC transporter permease protein [Vibrio cholerae bv. albensis VL426] gi|229529116|ref|ZP_04418506.1| amino acid ABC transporter permease protein [Vibrio cholerae 12129(1)] gi|229607589|ref|YP_002878237.1| amino acid ABC transporter permease protein [Vibrio cholerae MJ-1236] gi|254226031|ref|ZP_04919630.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51] gi|254286780|ref|ZP_04961734.1| amino acid ABC transporter, permease protein [Vibrio cholerae AM-19226] gi|254848947|ref|ZP_05238297.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255745379|ref|ZP_05419328.1| histidine ABC transporter permease protein HisM [Vibrio cholera CIRS 101] gi|262153518|ref|ZP_06028647.1| histidine ABC transporter permease protein HisM [Vibrio cholerae INDRE 91/1] gi|262167418|ref|ZP_06035125.1| histidine ABC transporter permease protein HisM [Vibrio cholerae RC27] gi|297579379|ref|ZP_06941307.1| amino acid ABC transporter [Vibrio cholerae RC385] gi|298498100|ref|ZP_07007907.1| amino acid ABC transporter [Vibrio cholerae MAK 757] gi|9656390|gb|AAF95009.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548461|gb|EAX58519.1| amino acid ABC transporter, permease protein [Vibrio cholerae 2740-80] gi|121630490|gb|EAX62882.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52] gi|124116115|gb|EAY34935.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587] gi|125621414|gb|EAZ49749.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51] gi|126510581|gb|EAZ73175.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC 8457] gi|126518506|gb|EAZ75729.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33] gi|146316823|gb|ABQ21362.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|148873978|gb|EDL72113.1| amino acid ABC transporter, permease protein [Vibrio cholerae 623-39] gi|149741169|gb|EDM55220.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-2] gi|150423207|gb|EDN15154.1| amino acid ABC transporter, permease protein [Vibrio cholerae AM-19226] gi|183012927|gb|EDT88227.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-3] gi|227009878|gb|ACP06090.1| amino acid ABC transporter, permease protein [Vibrio cholerae M66-2] gi|227013759|gb|ACP09969.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|229332890|gb|EEN98376.1| amino acid ABC transporter permease protein [Vibrio cholerae 12129(1)] gi|229337461|gb|EEO02478.1| amino acid ABC transporter permease protein [Vibrio cholerae bv. albensis VL426] gi|229342687|gb|EEO07679.1| amino acid ABC transporter permease protein [Vibrio cholerae TM 11079-80] gi|229343546|gb|EEO08521.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9] gi|229351684|gb|EEO16625.1| amino acid ABC transporter permease protein [Vibrio cholerae B33] gi|229355547|gb|EEO20468.1| amino acid ABC transporter permease protein [Vibrio cholerae BX 330286] gi|229370244|gb|ACQ60667.1| amino acid ABC transporter permease protein [Vibrio cholerae MJ-1236] gi|254844652|gb|EET23066.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255737209|gb|EET92605.1| histidine ABC transporter permease protein HisM [Vibrio cholera CIRS 101] gi|262024115|gb|EEY42809.1| histidine ABC transporter permease protein HisM [Vibrio cholerae RC27] gi|262030645|gb|EEY49280.1| histidine ABC transporter permease protein HisM [Vibrio cholerae INDRE 91/1] gi|297536973|gb|EFH75806.1| amino acid ABC transporter [Vibrio cholerae RC385] gi|297542433|gb|EFH78483.1| amino acid ABC transporter [Vibrio cholerae MAK 757] gi|327484413|gb|AEA78820.1| Histidine ABC transporter, permease protein HisM [Vibrio cholerae LMA3894-4] Length = 225 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 112/203 (55%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LIIDS P L + + T+ + +S VI L+ +A+ R SL Y++ Sbjct: 3 FSLIIDSLPIYL-SGLWTTVWLVSLSLVIGLLCAIPLAIARNS-KQKWFSLPAWGYIYFL 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQWFPVKDTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G++R QT + IILP + S S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFEAFLSAGLFYMALT 203 >gi|227818837|ref|YP_002822808.1| ABC-type amino acid transport system, permease component [Sinorhizobium fredii NGR234] gi|36959095|gb|AAQ87520.1| Transporter [Sinorhizobium fredii NGR234] gi|227337836|gb|ACP22055.1| putative ABC-type amino acid transport system, permease component [Sinorhizobium fredii NGR234] Length = 216 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 98/143 (68%), Gaps = 2/143 (1%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ +F+GTPLL+QLFV++YG+ +GI ++++A+ I+ TL+ SA++ EI R SI ++PKG Sbjct: 55 YIGVFQGTPLLMQLFVVYYGVALLGIEVNAWIAVAIAFTLHASAFLGEIWRGSIEAVPKG 114 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF-ISILKSTSVASTITIPEIFQTAQ 179 Q +A+ A+GL ++ IILPQ + S +P + F + ++K TS+A+ + E+ + Q Sbjct: 115 QTEAANALGLHYVSRMKDIILPQALKIS-MPATIGFLVQLIKGTSLAAIVGFIELTRAGQ 173 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 I + TY+PL+++ + +Y I+ Sbjct: 174 IISNQTYRPLLVFGIVGAIYFII 196 >gi|332799902|ref|YP_004461401.1| polar amino acid ABC transporter, inner membrane subunit [Tepidanaerobacter sp. Re1] gi|332697637|gb|AEE92094.1| polar amino acid ABC transporter, inner membrane subunit [Tepidanaerobacter sp. Re1] Length = 242 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 109/200 (54%), Gaps = 11/200 (5%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF------FSDTIISLIMHF---YVWI 64 P L A +TL I+ +I IG + VIR I+ I F YV + Sbjct: 15 PMFLRGA-GMTLLISITGTIIGFFIGLLVGVIRSVPIPESGVKKLILKCINAFLNAYVEV 73 Query: 65 FRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTP++VQ VI+YG +G+ D A + +++N AY++EI+R I+SI KGQ++ Sbjct: 74 FRGTPMIVQATVIYYGSAQALGLDMDKLTAAFLIVSINTGAYMAEIVRGGIVSIDKGQFE 133 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A++A+G+ QT+ ++ILPQ I +EF+ +K TSV + I++ E+F + IV Sbjct: 134 AAHAVGMNHMQTMVNVILPQVIRNILPATGNEFVINIKDTSVLNVISVTELFFQTKSIVG 193 Query: 184 TTYQPLIIYCELAFVYLILT 203 Y+ + + +Y ++T Sbjct: 194 NNYKYFETFFIASVIYFVMT 213 >gi|292558363|gb|ADE31364.1| Amino acid ABC transporter,3-TM region containing permease protein [Streptococcus suis GZ1] Length = 250 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 121/217 (55%), Gaps = 9/217 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L+ +++ QLL + + +T+ +A +SF I+++IG + + + + +V + R Sbjct: 34 GLLKNNYGQLL-SGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKAL-RVTSSVFVDVVR 91 Query: 67 GTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 G PL++ IF+G+P++ + FVA I+L+LN AYI+EI+R I ++P Sbjct: 92 GIPLMIVAAFIFWGIPNLIESMTGQQSPINDFVAGTIALSLNSGAYIAEIVRGGIQAVPA 151 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +AS ++G++ T+R IILPQ ++F+ LK T++ S I + E+FQ + Sbjct: 152 GQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTTIISAIGLVELFQAGK 211 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 I++ YQ +Y LA +YL++ + + K+E Sbjct: 212 IIIARNYQSFRMYAILAIIYLVVITLLTRLARKLEKG 248 >gi|251788880|ref|YP_003003601.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247537501|gb|ACT06122.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 238 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 66/196 (33%), Positives = 113/196 (57%), Gaps = 10/196 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +A+ VTL + SF + ++ + +R+ + +S Y+ FRGTPLL+QLF+ Sbjct: 14 LLSALPVTLGLFFSSFAVGAVLSVLLVAMRVS-AVWPLSGFARLYMLAFRGTPLLIQLFL 72 Query: 77 IFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 I+YGL +V DS F +++L L + Y +EI+R +++SIP GQ +A A Sbjct: 73 IYYGLGQFSVVRDSLFWPVLRDPFSCAVLALALCTAGYTAEILRGALLSIPAGQIEAGLA 132 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++R +R II P + + S+E I ++KST++AS +T+ ++ AQ+I+ TY+ Sbjct: 133 CGMSRWLLLRRIIAPIALRHALPAWSTEAILLIKSTALASLVTVWDVTGVAQQIIQRTYR 192 Query: 188 PLIIYCELAFVYLILT 203 L ++ A +YL+L Sbjct: 193 TLEVFVCAALIYLLLN 208 >gi|71738063|ref|YP_272588.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558616|gb|AAZ37827.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322172|gb|EFW78268.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320331823|gb|EFW87761.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330872849|gb|EGH06998.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 215 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 109/184 (59%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ ++F+ +IG + +R T + Y+ +F+GTPLL+QLF++F+G+ Sbjct: 19 TVALSLMAFIGGGLIGLLVMGMRTS-EKTGPRVTAKLYIELFQGTPLLMQLFLVFFGVAL 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ + A ++LTL SAY++EI R + SI KGQW+AS ++ +T + +R++ILPQ Sbjct: 78 MGMNISPWAAAALALTLFTSAYLAEIWRGCVESISKGQWEASASLAMTPFEQMRYVILPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T+V S I E+ +T + + T++P ++Y +A Y IL Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGSMLANATFEPFMVYGFVALGYFIL- 196 Query: 204 SFCY 207 CY Sbjct: 197 --CY 198 >gi|150018983|ref|YP_001311237.1| polar amino acid ABC transporter inner membrane subunit [Clostridium beijerinckii NCIMB 8052] gi|149905448|gb|ABR36281.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium beijerinckii NCIMB 8052] Length = 242 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 72/245 (29%), Positives = 131/245 (53%), Gaps = 41/245 (16%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-----IRIFFSDTIISLI 57 ++ FN+ ++ F + TL ++ + +++L++G V I+IF +I Sbjct: 14 FKDFNIFLEGF--------LTTLEVSILGLILALMLGIIFGVLSTSKIKIF------KVI 59 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 YV + + TPL++Q+F +F GLP+I +V F+ I+ + + AYISE++R+ I SI Sbjct: 60 NRIYVEVIQNTPLVIQVFFLFNGLPYIKVVLPVFLIGILGVGVYHGAYISEVVRTGITSI 119 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKGQ++A+ + G + QT+R+IILPQT+ PL+++ ++++K+TSV + I ++ T Sbjct: 120 PKGQFEAAKSQGFSHTQTMRYIILPQTVKIIIPPLANQLVNLIKNTSVLAMIAGGDLMYT 179 Query: 178 AQRIVSTT--YQPLIIYCELAFVYLILTSFCYIIQ---------------IKIESSVTQH 220 A S Y P Y +Y I+ CY + + IE S+T+ Sbjct: 180 ADSWSSANMYYGP--AYVITGALYFIM---CYPLAMISRKLELREKKKALVDIEDSITEQ 234 Query: 221 TYSVD 225 + + + Sbjct: 235 SVATE 239 >gi|319404358|emb|CBI77958.1| ABC transporter, permease protein [Bartonella rochalimae ATCC BAA-1498] Length = 235 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 69/222 (31%), Positives = 124/222 (55%), Gaps = 12/222 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ + L+ +VTL + IS I L++G I IR+ ++ + + Y++ FR + Sbjct: 14 LLNRYSLKLFDGFIVTLKLVSISCSIGLLLGILITFIRLS-NNKPLQYLARAYIYFFRSS 72 Query: 69 PLLVQLFVIFYGLP-------HIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLL QLF+ +YGL IG+ + +++ + +LN +AY +EI R S++++ Sbjct: 73 PLLAQLFLFYYGLGSLSSFWQQIGLWWFFQNAWYCCLFIFSLNSAAYQAEIFRGSLLAVA 132 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 Q +AS A+GL R T II PQ + + PL +EFI + KS+++AS +T+ ++ T Sbjct: 133 AEQREASKALGLNRSTTFFKIIFPQAMVVALRPLGNEFILMTKSSAIASLVTVYDLMGTT 192 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + I S T+ +Y A +YLI+ + + I IE +T++ Sbjct: 193 KLIYSRTFD-FQVYVWAAIIYLIIVELIHRVIILIEHYLTRY 233 >gi|259502845|ref|ZP_05745747.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] gi|312870480|ref|ZP_07730600.1| arginine ABC transporter, permease protein ArtQ [Lactobacillus oris PB013-T2-3] gi|259169212|gb|EEW53707.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] gi|311094037|gb|EFQ52361.1| arginine ABC transporter, permease protein ArtQ [Lactobacillus oris PB013-T2-3] Length = 213 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 56/160 (35%), Positives = 97/160 (60%), Gaps = 1/160 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I+ YVW+ RGTPLL+QL +FYGLP IGIVF + A +++ LN++AY +EI R + Sbjct: 50 ILEIYVWLMRGTPLLLQLIFVFYGLPIIGIVFQRYDAALVAFILNYAAYFAEIFRGGFQA 109 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ++A+ + L+ QT+R I++PQ + + +E I+++K +S+ I + ++ + Sbjct: 110 IDEGQFEAARVLRLSYWQTLRKIVIPQVVKIVIPSIGNEVINLVKDSSLVYVIGLGDLLR 169 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 A + ++ L+ + +YLIL C +I K+E Sbjct: 170 -AGNVATSRDVTLLPLLLVGLIYLILVGICTLILRKVEQR 208 >gi|322832078|ref|YP_004212105.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321167279|gb|ADW72978.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 219 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 124/208 (59%), Gaps = 11/208 (5%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF---FSDTIISLI 57 M+++W ++I + P LL A +TL I+ + V LIIG R F FS + +L+ Sbjct: 1 MQFDW-SVIWPALPILLEGA-KMTLWISVLGLVGGLIIGVIAGFARAFGGWFSSNV-ALV 57 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 ++ + RGTP++VQ+ I++ LP + + D F A ++++ +N AYI+EI R +++ Sbjct: 58 ---FIELIRGTPIVVQVMFIYFALPMMVPDLRIDPFSAAVVTIIINSGAYIAEITRGAVL 114 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SI G +A A+GL+R+ T+R+II+P + PL +++I +K TS+ I + E+ Sbjct: 115 SIHNGFREAGLALGLSRRATLRYIIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELT 174 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 + Q I++ ++ + I+ +A +YLI+T Sbjct: 175 RQGQEIIAGNFRAMEIWSAVAVIYLIIT 202 >gi|262404203|ref|ZP_06080758.1| amino acid ABC transporter permease protein [Vibrio sp. RC586] gi|262349235|gb|EEY98373.1| amino acid ABC transporter permease protein [Vibrio sp. RC586] Length = 225 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 113/203 (55%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LIIDSFP L + T+ + S V+ L+ +A+ R +S Y++ Sbjct: 3 FSLIIDSFPVYL-GGLWTTVWLVSFSLVVGLLWAIPMAIARSS-KQKWLSFPAWGYIYFL 60 Query: 66 RGTPLLVQLFVIFYGL----PHIGIVFD-SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ P G +++ ++ +++ LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQFFPVKGTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G+ R QT + IILP + + S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMGRWQTYQRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFEAFLTAGLFYMSLT 203 >gi|308068847|ref|YP_003870452.1| amino acid ABC transporter permease ytmM [Paenibacillus polymyxa E681] gi|305858126|gb|ADM69914.1| Probable amino-acid ABC transporter permease protein ytmM [Paenibacillus polymyxa E681] Length = 236 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 117/215 (54%), Gaps = 14/215 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++A+ TL I +S + L+IG A+ RI+ ++S I H YV RGTP+L+ L + Sbjct: 15 LFSALPNTLIITVVSVMAGLVIGIITALARIY-KVPVLSQISHGYVTFIRGTPMLMHLLL 73 Query: 77 IFYGLP--------HIGIVFDS-----FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I++ LP H G S V +IS ++ AY+SE++RS I S+ KGQ + Sbjct: 74 IYFSLPLLIDAGAKHFGWPLQSKDVPYMVFALISFSITSGAYMSEVVRSGIQSVNKGQIE 133 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+YA+G+T Q +R I+ PQ S L++ I +L +++A T+++ EI A+ + S Sbjct: 134 AAYAVGMTTWQVLRRIVFPQAFVVSLPNLTNSVIGMLHGSTLAFTVSVTEIQAQAEILAS 193 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 T ++ L +Y A ++ LT I +E + Sbjct: 194 TNWKYLEVYIAAALLFWGLTVLIERISGLVEKKIN 228 >gi|300716009|ref|YP_003740812.1| hypothetical protein EbC_14300 [Erwinia billingiae Eb661] gi|299061845|emb|CAX58961.1| uncharacterized protein [Erwinia billingiae Eb661] Length = 219 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 68/220 (30%), Positives = 122/220 (55%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I S P LL A +TL I+ + V LIIG R + I I Sbjct: 1 MQFDW-SAIWPSIPALLEGA-RLTLWISVLGLVGGLIIGLVAGFARAY-GGWISRNIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D A ++++ +N AYI+EI R +++SI Sbjct: 58 FIELIRGTPIVVQVMFIYFALPMAFTDLRIDPLSAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 G +A A+GL+R++T+R++I+P + PL +++I +K TS+ I + E+ + Sbjct: 118 NGFREAGLALGLSRRETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A +YL +T I +IE + Sbjct: 178 QEIIAGNFRALEIWSAVAVIYLFITLMLSFILRRIEKRMK 217 >gi|291561989|emb|CBL40800.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SS3/4] Length = 236 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 111/201 (55%), Gaps = 5/201 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFS----DTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 TL IA + +I ++IG IA +R+ ++ + FYV +FRGTP++VQL + +Y Sbjct: 31 TLLIAVVGMLIGVLIGTIIATVRVLPKYKTLPRALNAVCSFYVGLFRGTPMVVQLLIFYY 90 Query: 80 -GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 LP +GI ++ LN AYISEI+RS I S+ GQ +A A+GL + Sbjct: 91 VMLPLMGIKLPGVRVAMVVFGLNSGAYISEIMRSGIQSVDPGQLEAGRAVGLGFGPAMIR 150 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 I++PQ + L +EFI+++K TSV S + +++ I S +Y+ ++ Y +A + Sbjct: 151 IVIPQAVKNILPTLGNEFIALIKETSVVSFVGAADLYVAFNYIGSNSYEFMVPYLVMAAI 210 Query: 199 YLILTSFCYIIQIKIESSVTQ 219 Y++L I+ +E S+ + Sbjct: 211 YIVLVLVISILVKLMERSLKK 231 >gi|91780749|ref|YP_555956.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693409|gb|ABE36606.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] Length = 218 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 125/218 (57%), Gaps = 5/218 (2%) Query: 4 EWFNLIIDSFPQLLYAAIV-VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 W + I+D P L+ A++ + + + C+ ++S ++G A++++ ++ + + Sbjct: 2 HWHD-IVDFVPILIQGAVMSIVITLGCL--LLSTVLGLTWALLKMSRYPLVVRGVSTM-I 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RG P++V LF I++ LP I I + A II L +S Y++EI R+ I ++ GQ+ Sbjct: 58 NVVRGLPMIVLLFYIYFVLPEIHIQVSALQASIIGLGFGYSTYVAEIFRAGIEAVDPGQY 117 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ +IG+ R +T+ +ILPQ I + P S+ + +LK +S+ASTIT+ E+ + Q I Sbjct: 118 EAAQSIGMGRVKTMVRVILPQAIKVALPPYSNTLVMMLKDSSLASTITVAEMTREGQLIA 177 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++T+Q L +Y +A YL ++ + +E +H Sbjct: 178 ASTFQNLTVYTLVAIGYLAMSLPLMSMTRTLERRFGRH 215 >gi|332715516|ref|YP_004442982.1| amino acid ABC transporter membrane spanning protein [Agrobacterium sp. H13-3] gi|325062201|gb|ADY65891.1| amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 219 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 110/192 (57%), Gaps = 6/192 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIFRGTPLLVQLF 75 L A+ T+ + I+ + ++GFF+A+ R SD + + Y+ + +G P+L+ LF Sbjct: 14 LLTALQWTVLLTIIALIGGGLVGFFVALART--SDLKALRIAAGTYIQVIQGIPVLMILF 71 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 + +YGL G+ +A S+T+ S Y++EI R I ++PK QW+AS ++ LTR Q Sbjct: 72 LSYYGLSLAGLELPPLIAAGASMTIYTSGYLAEIWRGCIQAVPKQQWEASESLALTRAQQ 131 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 R++ILPQ I S P + ++K+TS+AS I E+ + Q I + T+QP ++ + Sbjct: 132 YRYVILPQAIRISLPPTVGFAVQVVKNTSIASIIGFVELARAGQLINNATFQPFRVFVAV 191 Query: 196 AFVYLILTSFCY 207 A +Y I+ CY Sbjct: 192 AVLYFIV---CY 200 >gi|239834034|ref|ZP_04682362.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239822097|gb|EEQ93666.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 240 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 61/180 (33%), Positives = 104/180 (57%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++C + V+ LI+ AV + + ++ Y+ I R TP LVQ+F IF+GLP Sbjct: 41 TIELSCAAMVLGLIVSIICAVGKTS-GPKPVRFVIDAYIEIIRNTPFLVQIFFIFFGLPS 99 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 G+ A +++L +NF AY +EIIR+ I SI KGQ +A A+GL+R Q R++I+ Sbjct: 100 AGLRLSPNSAALLALIVNFGAYGTEIIRAGIESIHKGQVEAGTALGLSRLQVFRYVIMKP 159 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + T L+S+FI ++ ++SV S I+ E+ + S T+ +Y + +YL+++ Sbjct: 160 ALRTVYPSLTSQFIYLMLTSSVVSVISANELAAAGNDLQSATFASFEVYIVITLMYLVMS 219 >gi|116254798|ref|YP_770634.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259446|emb|CAK10584.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 222 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 63/180 (35%), Positives = 102/180 (56%), Gaps = 2/180 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+I + P++L A V T+ I I+ + ++GF +AV R F ++ + + R Sbjct: 6 NVIFSNLPEILSGAWV-TIVIWIITTPAAAVLGFLVAVAR-RFGGVMLDKAFGIVIAVLR 63 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTP L+Q+F+++YG P +G+ D A +I L++ +AY SEI RS ++PKG +A Sbjct: 64 GTPFLIQIFLVYYGGPFVGLSLDPIPAGVIGLSIYGAAYFSEIFRSGFAAVPKGHIEAGI 123 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +GLT+ Q IR I+LP+ P + + ++K T+V S IT+PE+ T I S Y Sbjct: 124 CVGLTQGQIIRRILLPEMTMLVLPPSVNMTVILMKETAVLSIITVPELTATLSAIGSQQY 183 >gi|317153463|ref|YP_004121511.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] gi|316943714|gb|ADU62765.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] Length = 295 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 66/238 (27%), Positives = 129/238 (54%), Gaps = 35/238 (14%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI---FFSDTIISLIMHFYVWIFRGTPL 70 P LL ++ TL ++ + V++ ++G + ++R F+ + + YV + R TP Sbjct: 62 PGLLTEGLITTLRLSLWAGVLATVVGMAVGLMRTSPRLFNRQLSTT----YVGLIRNTPP 117 Query: 71 LVQLFVIFYGLPH-----IGI-----------------------VFDSFVAIIISLTLNF 102 LV +FV ++ + +G+ F F++ +++L L Sbjct: 118 LVLIFVFYFFIGDQIMLWLGVDDFVRALSDEARSNLAWFFGRMDRFPRFLSAVVTLALFE 177 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AYI+EI+R+ I S+ +GQW+A+ A+G++R + +RHII+PQ + L+ +FISI+K Sbjct: 178 GAYIAEIVRAGIRSVERGQWEAATALGMSRTRAMRHIIMPQALQRMLPALAGQFISIIKD 237 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +++ S I+I E+ Q+I++TTY+ I+ + +Y +LT C + K+E ++++ Sbjct: 238 SAIVSVISIEELTFQGQQIMTTTYRGFEIWTTVLAMYFVLTFACSLAVRKLEVALSRQ 295 >gi|317053915|ref|YP_004117940.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316951910|gb|ADU71384.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 227 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 62/158 (39%), Positives = 97/158 (61%), Gaps = 9/158 (5%) Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAY 105 S + FYVW+FRGTPLL+Q+F+I+YGL + V +S + +I+L LN +AY Sbjct: 48 SYVARFYVWLFRGTPLLIQIFMIYYGLGSLPAVRESIFWPLLRDPYWCGLIALILNDAAY 107 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 SEI+R + ++ +A+ G++R T+R I LP I + S+E IS++KSTS+ Sbjct: 108 TSEILRGGLNAVSVQSLEAAKVCGMSRFTTLRRITLPIAIRQALPAYSNEIISMIKSTSL 167 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 STI++ E+ A IVS T++ L ++ A +YL+LT Sbjct: 168 VSTISLMEMTGIADSIVSETFRALEVFLSAAIIYLLLT 205 >gi|300871131|ref|YP_003786003.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease [Brachyspira pilosicoli 95/1000] gi|300688831|gb|ADK31502.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Brachyspira pilosicoli 95/1000] Length = 205 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 58/159 (36%), Positives = 96/159 (60%), Gaps = 4/159 (2%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSA 104 F + + I Y W+FRGTPL++QL +YG+P I I F +F + I+ LN++A Sbjct: 30 FSAPKFVRYIFDIYAWLFRGTPLILQLIFFYYGIPLITNNKIAFPAFTSAAITFVLNYAA 89 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 Y+ EI R+ I SI KGQ++A+Y + L +Q + IILPQ I PLS+E I+++K TS Sbjct: 90 YLMEIFRAGIESIDKGQYEAAYVLNLNYRQIMTRIILPQAIRKVLPPLSNEAINLIKDTS 149 Query: 165 VASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + I ++ A+++++ ++ LI + +YL+ T Sbjct: 150 LVIVLGIGDLMLYARQVLTRDFK-LIPFVIAGIIYLLFT 187 >gi|313144070|ref|ZP_07806263.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818] gi|313129101|gb|EFR46718.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818] Length = 246 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 106/187 (56%), Gaps = 10/187 (5%) Query: 24 TLPIACISFVISLI---IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG 80 TL ++C++ +I+LI IG +A R I+ YV IF+ TPL++Q+F +++ Sbjct: 47 TLSVSCLALLIALIFGTIGGVMATSRF----KILKAYTRIYVEIFQNTPLVIQIFFLYFA 102 Query: 81 LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 L +GI D F ++ + AY+SE++RS I+S+PKGQ++AS + G T Q +R+II Sbjct: 103 LHPLGIHLDVFSVGVLGVGAYHGAYVSEVVRSGILSVPKGQFEASASQGFTYTQQMRYII 162 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LPQTI PL+++ ++++K+TSV + EI A T Y A +Y Sbjct: 163 LPQTIKIILPPLTNQMVNLIKNTSVLLIVAGGEIMYVADSYAGDTSNYAPAYLFTALLYF 222 Query: 201 ILTSFCY 207 I+ CY Sbjct: 223 IV---CY 226 >gi|296272954|ref|YP_003655585.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter nitrofigilis DSM 7299] gi|296097128|gb|ADG93078.1| polar amino acid ABC transporter, inner membrane subunit [Arcobacter nitrofigilis DSM 7299] Length = 221 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 121/201 (60%), Gaps = 8/201 (3%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 WF ++ FP +L A+ +T+ IA IS ++L + IA+IR ++ + I Y+ Sbjct: 7 WF---LNLFPIVL-PALKLTISIALISLFLTLCLSILIAIIR-YYKVKGLYQIFGLYITF 61 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 FR TPL+ QLF++++GLP I +S + A +I+LTLN S++++E +R ++ SI KGQ Sbjct: 62 FRATPLVAQLFILYFGLPSIFPFLESMTAYEATVIALTLNTSSFMAEDLRGALESIDKGQ 121 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A Y++G+T+ QT++ +ILPQ + + + FI I+K T++ T+ + +I ++ Sbjct: 122 NEACYSMGMTKFQTMKRVILPQAFIFALPSIGNRFIGIIKGTALGFTVGLADIMAKSKIE 181 Query: 182 VSTTYQPLIIYCELAFVYLIL 202 + + + Y + +YL+L Sbjct: 182 AALSLRFFEAYLCVTIIYLVL 202 >gi|254473824|ref|ZP_05087219.1| ABC-type glutamine transport system, permease component [Pseudovibrio sp. JE062] gi|211957210|gb|EEA92415.1| ABC-type glutamine transport system, permease component [Pseudovibrio sp. JE062] Length = 248 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 66/186 (35%), Positives = 111/186 (59%), Gaps = 4/186 (2%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF-YVWIFRGTPLLVQLFVI 77 A + T+ ++ + IS+++G F+A+ + SD L + YV + R P LV +F + Sbjct: 45 AGLQETISVSLTAIAISMLVGLFVALPGL--SDNKFGLAFNRTYVEVVRSVPSLVLIFWV 102 Query: 78 FYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +YGLP + I + F A +++L L+ SA+ +EI R+ I S+ KGQ +A +++GL+ Q + Sbjct: 103 YYGLPVVANISINVFWAGVLALALSDSAFQAEIFRAGIQSVDKGQIEAGHSLGLSYFQRL 162 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 R IILPQ I PL ++ + +LK +S+ S I + ++ + A +V T Y+PL IY L Sbjct: 163 RFIILPQAIRRMLPPLGNQLVYMLKMSSLVSVIGLQDLTRRANELVVTEYRPLEIYTVLV 222 Query: 197 FVYLIL 202 YL+L Sbjct: 223 LEYLVL 228 >gi|326938358|gb|AEA14254.1| glutamine transport system permease protein glnP [Bacillus thuringiensis serovar chinensis CT-43] Length = 221 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 103/163 (63%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++TL +A ++ V+S IIG I ++R + ++S ++ V + R PLL+ +F Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILR-YTKIPVVSQVLGVVVEVIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ + A I++LT+ +A ISEI+RS ++SI KGQ +A+ + GLT Q + Sbjct: 74 TYFALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 HIILPQ + PL S+FIS+LK TS+A I++PE+ AQ Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQ 176 >gi|332715444|ref|YP_004442910.1| amino acid ABC transporter membrane spanning protein [Agrobacterium sp. H13-3] gi|325062129|gb|ADY65819.1| amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 230 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 105/187 (56%), Gaps = 1/187 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VTL A F I+LI+G A++R +IS V R TPLLVQLF ++Y Sbjct: 26 GLTVTLKAAAAGFAIALILGLVFALLR-RSRVKLISWPTAVVVEFLRDTPLLVQLFFLYY 84 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 LP GIV +F+ ++L L ++AY SE+ R + ++ GQW+A+ A+ LTR QT R I Sbjct: 85 VLPEFGIVLPAFLTGALALGLQYAAYTSEVYRGGMEAVHHGQWEAATALNLTRMQTYRDI 144 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I+PQ I + + ++++K T V S +T+ E+ A I T++ L+ + ++ Sbjct: 145 IIPQAIPRIVPAMGNYLVAMIKETPVLSVVTVLEMMGLANMIGERTFEYLVPLTLVGLIF 204 Query: 200 LILTSFC 206 L+LT C Sbjct: 205 LLLTIIC 211 >gi|322419252|ref|YP_004198475.1| polar amino acid ABC transporter inner membrane subunit [Geobacter sp. M18] gi|320125639|gb|ADW13199.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter sp. M18] Length = 261 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 60/190 (31%), Positives = 109/190 (57%), Gaps = 10/190 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLIMHFYVWIFRGTPLLVQLF 75 I VT + + +++++IG + RI FF+ YV I RG PLLVQ+F Sbjct: 62 GIAVTFQVTLGAILLAIVIGLVTGLGRISKNRFFNGA-----ASLYVEIIRGIPLLVQIF 116 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+Y L + + + ++ II++ + + AY+ E++R+ I SI KGQ +A+ ++G+ +Q Sbjct: 117 YIYYALGTV-VKVPAILSAIIAMAVCYGAYMGEVVRAGIESIAKGQREAALSLGMNGRQA 175 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 + H+ILPQ + P+ +EFI++LK +S+ S I + ++ + + S ++ Y + Sbjct: 176 MIHVILPQAVKVILPPVGNEFIALLKDSSLVSIIAVADLLRRGREYASESFTYFETYTVI 235 Query: 196 AFVYLILTSF 205 A +YLI+T F Sbjct: 236 ALIYLIITLF 245 >gi|169826265|ref|YP_001696423.1| amino-acid ABC transporter permease [Lysinibacillus sphaericus C3-41] gi|168990753|gb|ACA38293.1| Probable amino-acid ABC transporter permease protein [Lysinibacillus sphaericus C3-41] Length = 227 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 119/215 (55%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F I+ S P +L I VTL IA + +I I+G +A+ +I ++ FY IF Sbjct: 13 FTAIVPSIPYIL-KGIGVTLQIAIGASIIGFIVGILLALCKIG-KVKVLRWFADFYTSIF 70 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I+Y +P + I + II+ LN AYISEIIR+ I ++ KGQ +A Sbjct: 71 RGTPLVLQLLIIYYAVPQLLDIQIEPIPTAIIAFGLNSGAYISEIIRAGINAVDKGQMEA 130 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + ++ II+PQ + L +EFI++ K T+V + I+ +I + A + + Sbjct: 131 AQALGIPYAKMMKDIIIPQAVKNILPSLVNEFITLNKETAVVTVISALDIMRRAYIVGGS 190 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 TY+ L +Y ++T + +IE + + Sbjct: 191 TYRYLEPLLFAGIIYYLMTLVLTFLGKRIEKGMRK 225 >gi|258621395|ref|ZP_05716429.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573] gi|258626822|ref|ZP_05721629.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603] gi|262165969|ref|ZP_06033706.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223] gi|262171176|ref|ZP_06038854.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451] gi|258580869|gb|EEW05811.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603] gi|258586783|gb|EEW11498.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573] gi|261892252|gb|EEY38238.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451] gi|262025685|gb|EEY44353.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223] Length = 225 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 116/203 (57%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LII+S P L + + T+ + +S VI L+ +A+ R ++S Y++ Sbjct: 3 FSLIIESLPVYL-SGLWTTVWLVSLSLVIGLMCAIPLAIARNS-KQKLLSYPAWGYIYFL 60 Query: 66 RGTPLLVQLFVIFYGL----PHIGIVFD-SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ P G +++ ++ +++ LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQWFPVKGTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G++R QT + IILP + + S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMSRLQTYKRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFEAFLSAGLFYMALT 203 >gi|227820463|ref|YP_002824434.1| ABC transporter permease [Sinorhizobium fredii NGR234] gi|227339462|gb|ACP23681.1| putative permease component of ABC transporter [Sinorhizobium fredii NGR234] Length = 234 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 112/199 (56%), Gaps = 1/199 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y + ++ + + + I +T+ I+ +S ++ G +A +R + + ++ Sbjct: 1 MSYTFQFGVLAQYQDQILSGIWLTIRISLLSIILGCAAGILLASVRSVWGGAV-RFLVDA 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV I R TP LVQLF++++GLP +G+ + A +I +T+N +AY +EIIR+ I +I K Sbjct: 60 YVEIIRNTPFLVQLFIVYFGLPGLGLRVGADTAALIGMTINLAAYSTEIIRAGIEAIHKS 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A+G TR Q RH+I+ I L S+F+ ++ ++S+ S I+ E+ +A Sbjct: 120 QIEAGEALGFTRFQIYRHVIIVPAIAKVYPALCSQFVLMMLASSICSAISTQELAASAAF 179 Query: 181 IVSTTYQPLIIYCELAFVY 199 I S TY+ IY + +Y Sbjct: 180 IESQTYRSFEIYIAVTLIY 198 >gi|210611519|ref|ZP_03288939.1| hypothetical protein CLONEX_01129 [Clostridium nexile DSM 1787] gi|319936516|ref|ZP_08010931.1| polar amino acid ABC transporter [Coprobacillus sp. 29_1] gi|210151966|gb|EEA82973.1| hypothetical protein CLONEX_01129 [Clostridium nexile DSM 1787] gi|319808408|gb|EFW04963.1| polar amino acid ABC transporter [Coprobacillus sp. 29_1] Length = 219 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 63/178 (35%), Positives = 108/178 (60%), Gaps = 1/178 (0%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + S+ L A ++TL I I + +++IG F A+IR + ++S I Y+ FR TP Sbjct: 6 MKSYLPLYEKACILTLKIGWIGILFAIVIGLFCALIR-HYKVPVLSTIAGGYIEFFRNTP 64 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LLVQLF +++GLP +GI + ++ L L AY++E RS + S+ + Q +++ ++G Sbjct: 65 LLVQLFFLYFGLPKLGISIGAEFCGVLGLALLGGAYMAEAFRSGLESVEQIQMESALSLG 124 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 ++R+Q +RHIILPQ I+ S + I +LK TSV S I++ ++ TA+ ++ Y+ Sbjct: 125 MSRQQAVRHIILPQAISISVPAFVANIIFLLKETSVFSAISLMDLMFTAKDLIGLYYK 182 >gi|229587873|ref|YP_002869992.1| putative amino acid ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229359739|emb|CAY46588.1| putative amino acid ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 229 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 123/209 (58%), Gaps = 12/209 (5%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EW +II P+ + AI+ TL + I+ ++ LI+ + V R + SL + Y++ Sbjct: 2 EW-EVIIKWLPKFIQGAIL-TLELVGIAVILGLILAIPLGVARASKRWYVRSL-PYAYIF 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSI 114 FRGTPLLVQLF+++YGL V D F ++TL+ +AYI+EI+R +I Sbjct: 59 FFRGTPLLVQLFLVYYGLAQFDAVRTSAMWPYLRDPFWCATATMTLHTAAYIAEILRGAI 118 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IP G+ +A+ A+G+++ +T+ +IILP+ S+E I +LK++S+AST+T+ E+ Sbjct: 119 QAIPPGEIEAARALGMSKPKTLFYIILPRAARIGLPAYSNEVILMLKASSLASTVTLLEL 178 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I++ Y + ++ YL+++ Sbjct: 179 TGMARTIIARNYLTVDMFFTAGVFYLLMS 207 >gi|242240068|ref|YP_002988249.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242132125|gb|ACS86427.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 239 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 64/196 (32%), Positives = 114/196 (58%), Gaps = 10/196 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +A+ VTL + SF I ++ + +R+ ++ + Y+ IFRGTPLL+QLF+ Sbjct: 14 LASALPVTLGLFFASFAIGAVLSILLVAMRVS-ANRPLRGFARGYMLIFRGTPLLIQLFL 72 Query: 77 IFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 ++YGL +V +S F ++SL L + Y +EI+R ++++IP GQ +A A Sbjct: 73 LYYGLGQFSMVRNSVLWPLLREPFTCAVLSLALCTAGYTAEILRGALLAIPVGQIEAGLA 132 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++R +R II P + + S+E I ++KST++AS +T+ ++ AQ+I+ TY+ Sbjct: 133 CGMSRWLLLRRIIAPVALRYALPAWSTEAILLIKSTALASLVTVWDVTGVAQQIIQRTYR 192 Query: 188 PLIIYCELAFVYLILT 203 + ++ A +YL+L Sbjct: 193 TMEVFVCAALIYLLLN 208 >gi|168184995|ref|ZP_02619659.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Bf] gi|182671932|gb|EDT83893.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Bf] Length = 228 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 57/163 (34%), Positives = 95/163 (58%), Gaps = 10/163 (6%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD----------SFVAIIISLTL 100 + I+ I Y+ RGTP+LVQL++I+YGLP IGI F F A I++L++ Sbjct: 46 NKILKYIAVSYIEFIRGTPVLVQLYIIYYGLPTIGIRFPEVPILGSNFPDFFAGILALSI 105 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N AY++EIIR+ I ++ KGQ +A+ ++G++ ++++I+PQ L +EFI+I+ Sbjct: 106 NSGAYVAEIIRAGIQAVDKGQMEAARSLGMSESMAMKNVIIPQAFKNILPALGNEFITII 165 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 K +S+ S I I E+ A + ++P A +Y I+T Sbjct: 166 KESSIVSIIGIHELMYNADTVRGNIFRPFEPLLVAAVMYFIMT 208 >gi|298293524|ref|YP_003695463.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296930035|gb|ADH90844.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 223 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 119/216 (55%), Gaps = 4/216 (1%) Query: 6 FN--LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 FN ++ D++ ++L +++T+ I V+ L+IG +A++++F ++ ++ + FYV Sbjct: 3 FNPAILTDNWREIL-DGMLLTILIWVAGTVLGLVIGLVVAIVQLF-TNRWVAAPLTFYVA 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTP L+QLFVI+YG P G+ VA + L L AY SEI R+ +S+P GQ + Sbjct: 61 LMRGTPFLIQLFVIYYGGPFFGLDLTPLVAGMAGLALYGGAYFSEIFRAGFLSVPVGQIE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +G++R +RH+ LPQ + L++ + + K T+V S IT+ E+ Q I S Sbjct: 121 AARIMGISRLSIVRHVQLPQMLVIILPALANMTVLLSKETAVLSVITVNELTSVIQSIGS 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 TT+ LA VY ++E V + Sbjct: 181 TTFAFAETLLFLALVYWAFLEIVTAAARRLEKRVGR 216 >gi|27365437|ref|NP_760965.1| amino acid ABC transporter permease [Vibrio vulnificus CMCP6] gi|27361585|gb|AAO10492.1| Amino acid ABC transporter, permease protein [Vibrio vulnificus CMCP6] Length = 227 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 113/203 (55%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LI++SFP L + T + +S VI L I +AV R + ++SL Y++ F Sbjct: 5 FSLIVESFPIYL-DGLWTTAWLVAVSLVIGLGIAIPLAVARNS-RNYVVSLPAWGYIYFF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I +PKG Sbjct: 63 RGTPLLVQLYLIYYGMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G++ T R I+LP + + S+E I +L ++VA +TI ++ A+ Sbjct: 123 EVEAAKAYGMSHWMTYRRIVLPSALRRALPAYSNEVIFMLHGSAVAGIVTIIDLTGAARL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 183 VNSRYYAPFESFLTAGLFYMSLT 205 >gi|332529815|ref|ZP_08405769.1| polar amino acid ABC transporter inner membrane protein [Hylemonella gracilis ATCC 19624] gi|332040836|gb|EGI77208.1| polar amino acid ABC transporter inner membrane protein [Hylemonella gracilis ATCC 19624] Length = 217 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 95/155 (61%), Gaps = 3/155 (1%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV +F+GTPLL+QLF+ ++G +G+ + A ++LTL SA+++EI R + +IPKG Sbjct: 56 YVQVFQGTPLLMQLFLTYFGFALLGLQTSPWTAAGLALTLYTSAFLTEIWRGCVAAIPKG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ ++ ++ + +RH+ILPQ + + P + ++K T++AS I E+ + Sbjct: 116 QWEAAQSLAMSFTEQLRHVILPQALRIAIPPTVGFLVQVVKGTALASVIGFVELTRAGNM 175 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 I + TYQP ++ +A +Y L C+ I + ++ Sbjct: 176 ISNVTYQPFTVFACVALLYFAL---CWPISLYAQT 207 >gi|293391346|ref|ZP_06635680.1| histidine transport system permease protein HisQ [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951880|gb|EFE01999.1| histidine transport system permease protein HisQ [Aggregatibacter actinomycetemcomitans D7S-1] Length = 220 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 121/216 (56%), Gaps = 10/216 (4%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L++ A ++TL +A S V+ LI+G AV+ ++ + M +V + RG P ++ + Sbjct: 8 LMFTAALMTLGLAVCSLVLGLILGMLFAVLE---ANRFVGKPMAVFVALLRGLPEILVVL 64 Query: 76 VIFYGLPHI-----G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 ++++G + G I F +F + +L L F+AY S+ +R +I +I KGQW++ A+ Sbjct: 65 LVYFGSSEVVEMITGDYIEFGAFGCGVFALCLIFAAYASQTLRGAIQAIAKGQWESGAAL 124 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL++ T HI++PQ + LS++++ +LK T++ S I + ++ + AQ I + T+QP Sbjct: 125 GLSKGYTFIHIVMPQVWRYALPGLSNQWLVLLKDTALISLIGVDDLMRQAQLINTNTHQP 184 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 Y A +YL++T + K+E T+ V Sbjct: 185 FTWYGIAALIYLLVTLVSQVGIRKLELRFTRFERGV 220 >gi|323698678|ref|ZP_08110590.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323458610|gb|EGB14475.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 218 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 64/184 (34%), Positives = 104/184 (56%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ I+FV ++G I + RI +S Y+ F+ TPLL+QLF+IF+G+ Sbjct: 20 TIGLSLIAFVSGGMVGLLILIGRIS-PRPALSRPARTYIEFFQDTPLLMQLFLIFFGVGL 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G + + LTL SAY++EI R + SI GQW+A ++ L+R Q +R +ILPQ Sbjct: 79 LGFDISPLITAALGLTLFTSAYLAEIWRGCVESIANGQWEAGESLALSRWQQLRFVILPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T+V S I EI +T I + T++PL++Y +A Y I+ Sbjct: 139 AVRIAVPPTVGFSVQVVKGTAVTSIIGFMEITKTGSMISNATFRPLLVYGMVAVGYFII- 197 Query: 204 SFCY 207 CY Sbjct: 198 --CY 199 >gi|322381529|ref|ZP_08055508.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154536|gb|EFX46833.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 202 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 63/157 (40%), Positives = 99/157 (63%), Gaps = 1/157 (0%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL +A +S V+S IIG + ++R + ++S ++ +V + R PLL+ +F + + LP Sbjct: 6 ITLWMAAVSIVLSFIIGSILGILR-YTRIPVVSQLVLLWVEMIRNLPLLLIIFFVRFALP 64 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 +GI FD + II+LT+ SA ISEIIR + SI KGQ +A+ + GLT QT+ HII P Sbjct: 65 EVGIKFDVITSAIIALTVFESAMISEIIRGGLNSIEKGQIEAARSSGLTYIQTLWHIIFP 124 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q + P S+FIS+LK TS+A I+ P++ + + Sbjct: 125 QAVKRMVPPTVSQFISLLKDTSLAVIISAPDLMRNVE 161 >gi|269104573|ref|ZP_06157269.1| amino acid ABC transporter permease protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268161213|gb|EEZ39710.1| amino acid ABC transporter permease protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 280 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 60/185 (32%), Positives = 118/185 (63%), Gaps = 4/185 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS-LIMHFYVWIFRGTPLLVQLFVIF 78 +++TL I+ +S + +L +G A++R+ SD+I+ + Y+ + R TPLLVQ+++++ Sbjct: 79 GLLITLKISAVSLIFTLGLGLITALLRL--SDSIVGRALARGYIELIRNTPLLVQIYILY 136 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 + L I + + F +++L+L AY +EI R+ + +IPKGQ++A+ ++GL++ Q R Sbjct: 137 FVLGPI-LDLERFTTAVLALSLFQGAYTAEIFRAGLNAIPKGQFEAAASLGLSQWQMYRF 195 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 +ILPQ I PL++E +S++K++S+ S + I ++ + IV+ T P ++ +A + Sbjct: 196 VILPQVIKRILPPLTNETVSLVKNSSIVSIMAIFDLTTEGRNIVADTAMPFEVWFTVAAI 255 Query: 199 YLILT 203 YL +T Sbjct: 256 YLCVT 260 >gi|255598560|ref|XP_002537035.1| Inner membrane amino-acid ABC transporter, putative [Ricinus communis] gi|223517730|gb|EEF25347.1| Inner membrane amino-acid ABC transporter, putative [Ricinus communis] Length = 147 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 63/141 (44%), Positives = 89/141 (63%), Gaps = 2/141 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L+ ++ P +L A TL A + + L++GF IAV+RI + YV I R Sbjct: 5 DLLHEAAPVMLTGA-GYTLLFALAAMLGGLVLGFPIAVLRIA-PWAPLRWPAALYVSIMR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQLFVI+YGLP +GI F A I++L+LN AY+SE +R +I SI GQW AS+ Sbjct: 63 GTPLLVQLFVIYYGLPSVGIEFTPVTAGILALSLNAGAYLSESLRGAIHSIGVGQWRASF 122 Query: 127 AIGLTRKQTIRHIILPQTITT 147 ++GLT Q +R ++LPQ + Sbjct: 123 SLGLTYGQALRFVVLPQPCGS 143 >gi|170697812|ref|ZP_02888898.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170137314|gb|EDT05556.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 218 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 116/205 (56%), Gaps = 4/205 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++W + I + P L+ + +T+ IA + V I+G + R + ++++ Sbjct: 1 MNFDW-SAIWAALPDLM-DGVRLTVFIALLGLVGGFIVGMIAGMFRAY-GPKAMNVLAQV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + RGTP++VQ+ +++ LP + I D A II++T+N AY++E++R +++SIPK Sbjct: 58 YIELIRGTPIVVQVMFLYFALPLLAHIRIDGLTAAIIAITVNSGAYLAEVVRGALLSIPK 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G +A A+GL+ + + I+ P PL ++ I LK TS+ I + E+ + Q Sbjct: 118 GLTEAGLAMGLSMPRVLLKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRKGQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILTS 204 I++ +Q + I+ +A +YLILT Sbjct: 178 EIIAGNFQAVEIWSAVAIIYLILTG 202 >gi|152996347|ref|YP_001341182.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Marinomonas sp. MWYL1] gi|150837271|gb|ABR71247.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuC [Marinomonas sp. MWYL1] Length = 220 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 114/203 (56%), Gaps = 1/203 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L VVT+ I ++ +++++ F +IR++ + I Y+ FRGT L+QL+ Sbjct: 10 LLQGAVVTIQIVAMALPLAVLMAFSFGLIRLY-APAPFKQIAIIYIEFFRGTSALIQLYW 68 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 I++ LP GI D+ A +++L LN +Y +E++R +I S+PKGQ++AS A+ T Q + Sbjct: 69 IYFVLPFFGITIDAMTAAVVALGLNIGSYGTEVVRGAIQSVPKGQYEASIALNFTSSQRL 128 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 II+PQ + P + I ++K+TS+ S ITI ++ A+ + TT Q I+ + Sbjct: 129 WRIIMPQALVNMIPPFGNLAIELVKATSLVSLITIGDLTFKAKMLADTTLQVGEIFGVVL 188 Query: 197 FVYLILTSFCYIIQIKIESSVTQ 219 Y ++ F ++E+ +++ Sbjct: 189 LFYFVMAQFLVFFIRRLETHLSK 211 >gi|15890305|ref|NP_355977.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|332715517|ref|YP_004442983.1| amino acid ABC transporter membrane spanning protein [Agrobacterium sp. H13-3] gi|15158506|gb|AAK88762.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|325062202|gb|ADY65892.1| amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 234 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 113/203 (55%), Gaps = 1/203 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y + + + L + I +T+ ++ +S V+ G +A +R + I+ +I+ Sbjct: 1 MSYTFQFGALAQYQNELLSGIWLTIKLSVLSIVLGCAFGILLASLR-SINGGIVRIIVDG 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TP LVQLF++++GLP +G + A +I +T+N +AY +EIIR+ I ++ K Sbjct: 60 YVEVIRNTPFLVQLFIVYFGLPGLGFRVGADTAALIGMTINLAAYSTEIIRAGIEAVHKS 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A+G T+ Q RH+I+ I L S+F+ ++ ++S+ S I+ E+ A Sbjct: 120 QIEAGEALGFTKYQIYRHVIIVPAIAKVYPSLCSQFVLMMLASSICSAISTHELAAAAAF 179 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S TY+ +Y + +YL L Sbjct: 180 VESQTYRSFEVYIVVTLIYLALA 202 >gi|227823073|ref|YP_002827045.1| putative transmembrane component of ABC transporter [Sinorhizobium fredii NGR234] gi|227342074|gb|ACP26292.1| putative transmembrane component of ABC transporter [Sinorhizobium fredii NGR234] Length = 222 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 115/203 (56%), Gaps = 5/203 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 + + W + D+ + + A + L IAC + V+ ++I +A R D ++S + Sbjct: 5 LDFRWLH---DAAGAIAHGAAMTLLLIACTT-VLGILISILLAAARRSRYD-LLSKAVAV 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TP LVQLF IF+GLP IGI D VA I+++TLN +AY +EI+ + + ++PKG Sbjct: 60 YVEVIRNTPFLVQLFFIFFGLPTIGIRLDPIVAAILAMTLNMAAYTTEIVGAGLDAVPKG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+GL Q ++LPQ + L+S+ + ++ ++V S I + E+ A Sbjct: 120 QSEAALALGLRAPQVFIKVVLPQALKVIFPALTSQVVIMMLESAVVSQIAVRELAHEADL 179 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + + T++ Y + +YL L+ Sbjct: 180 LQARTFRSFETYLVVTMIYLGLS 202 >gi|194017220|ref|ZP_03055832.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus ATCC 7061] gi|194011088|gb|EDW20658.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus ATCC 7061] Length = 217 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 71/198 (35%), Positives = 115/198 (58%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+++I++F L T+ + I+ + S +IG IA++RI ++ + YV Sbjct: 4 FSILIENF-HLYVEGFKYTIGASVIALIGSFLIGTLIAIMRIA-PLRPLNWLGTAYVEFV 61 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R PLL+ FV F+GLP +GIV D F A I+L + SA+I+E IR+ I ++P GQ +A+ Sbjct: 62 RNIPLLLITFVFFFGLPVLGIVADGFTAGTIALAIYTSAFIAEAIRAGIQAVPLGQMEAA 121 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A GL+ T+R+IILPQ I PL ++FI+++K++S+ I ++ I S T Sbjct: 122 RASGLSYGGTMRYIILPQAIKIVIPPLGNQFINLVKNSSILGVIAGFDLMYQGDLIASRT 181 Query: 186 YQPLIIYCELAFVYLILT 203 + +Y +A YL+LT Sbjct: 182 FVTFDVYIFVAMFYLLLT 199 >gi|187919546|ref|YP_001888577.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187717984|gb|ACD19207.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 220 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 108/202 (53%), Gaps = 11/202 (5%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q + A + TL I ++IGF IAV+++F + ++ Y+ +FRGTP LVQL Sbjct: 14 QPIAAGLATTLGTWAAGVAIGILIGFLIAVLQLFCGRWVRG-VLRLYIELFRGTPFLVQL 72 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F+++YG P G+ + A ++ L L SAY +E RS S+P G +A+ +GLTR Q Sbjct: 73 FLLYYGGPSFGLTLEPMTAGVLGLGLYGSAYFAEAFRSGFQSVPPGHLEAASCLGLTRWQ 132 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + I +PQ + L++ I + K T+V S +T+PE+ I S T+ Sbjct: 133 AVLRIQVPQMLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATF-------- 184 Query: 195 LAFVY-LILTSFCYIIQIKIES 215 AFV L++ CY+ +++ S Sbjct: 185 -AFVETLLVLCVCYLALVELTS 205 >gi|170769014|ref|ZP_02903467.1| glutamine ABC transporter, permease protein [Escherichia albertii TW07627] gi|170122086|gb|EDS91017.1| glutamine ABC transporter, permease protein [Escherichia albertii TW07627] Length = 219 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 123/220 (55%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P L+ A +TL I+ + L+IG R F I + I Sbjct: 1 MQFDW-SAIWPAIPLLIEGA-KMTLWISILGLAGGLVIGLAAGFARTF-GGWIANHIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R +TIR++ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A YLI+T I ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMK 217 >gi|126459641|ref|YP_001055919.1| polar amino acid ABC transporter, inner membrane subunit [Pyrobaculum calidifontis JCM 11548] gi|126249362|gb|ABO08453.1| polar amino acid ABC transporter, inner membrane subunit [Pyrobaculum calidifontis JCM 11548] Length = 232 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 120/218 (55%), Gaps = 13/218 (5%) Query: 11 DSFPQLLYA--AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 D LLY I T+ +A ++F I +++G + + R FF + I YV FRGT Sbjct: 8 DYIDALLYVSMGIPTTMSLAALAFSIGIVLGSLLLLTR-FFLPKPLPWIATAYVEAFRGT 66 Query: 69 PLLVQLFVIFYG----LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 PLLVQ+F+I++G L GI D F A +I+L LN +AY +EI R+++ +IP Q+ Sbjct: 67 PLLVQIFIIYFGVGGYLKAYGINLDPFTAGVIALGLNSAAYQAEIFRAAVQAIPVEQYLT 126 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI--PEIFQTAQRIV 182 + A T+ QT R+IILPQ + + L +E + ++K +S+ + I + P++F+ A Sbjct: 127 AEAYAFTKAQTFRYIILPQALRIALPALMNELVLLIKDSSLVAVIGVFPPDVFRRADYFS 186 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ + Y A VY IL CY + +KI + + Sbjct: 187 ASRFMYFEAYMAAATVYFIL---CYTM-VKISHWIERR 220 >gi|42779691|ref|NP_976938.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|42735608|gb|AAS39546.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] Length = 217 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 81/219 (36%), Positives = 124/219 (56%), Gaps = 9/219 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M NL+I+S PQLL + TL IAC + +IS I G +IR TI+ I Sbjct: 1 MGNSGINLLIESLPQLL-KGLEQTLLIACFTIIISTIGGILFGIIRTS-KITILRFISRT 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ +FR P+LV LF+ F+GLP +GI S VA I +L+L I EI+R ++ S+PK Sbjct: 59 YIELFRSIPILVWLFLFFFGLPITLGIDVSSTVAAITALSLWGITEIGEIVRGALQSLPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A +IG+ +KQ +++++PQ I + FI I+++TS+ I + E+ + Q Sbjct: 119 GQVEAGKSIGMNKKQLYQYVLIPQAIRRMIPATINIFIRIIQTTSLTVLIGVTEVIKAGQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQI---KIES 215 +IV T + +IY L Y +L CY + I K+E+ Sbjct: 179 QIVERTGEAFLIYGCLFIFYFLL---CYPLSIWSRKLET 214 >gi|229515241|ref|ZP_04404701.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA 21] gi|229347946|gb|EEO12905.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA 21] Length = 225 Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 112/203 (55%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LIIDS P L + + T+ + +S VI L+ +A+ R SL Y++ Sbjct: 3 FSLIIDSLPIYL-SGLWSTVWLVSLSLVIGLLCAIPLAIARNS-KQKWFSLPAWGYIYFL 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQWFPVKDTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G++R QT + IILP + S S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFEAFLSAGLFYMALT 203 >gi|313904157|ref|ZP_07837536.1| polar amino acid ABC transporter, inner membrane subunit [Eubacterium cellulosolvens 6] gi|313470959|gb|EFR66282.1| polar amino acid ABC transporter, inner membrane subunit [Eubacterium cellulosolvens 6] Length = 238 Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 114/209 (54%), Gaps = 23/209 (11%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD---------TIISLIMHFYVWIFRG 67 L +++V+TL + + +++G +AV+R II+ I H Y + RG Sbjct: 29 LGSSLVITLG----ALALGVVLGILVAVVRTNHDQRKGHASLGLKIINGICHVYTTVIRG 84 Query: 68 TPLLVQLFVIFYGLPHIGIVFDS----FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 TP++VQL ++ + ++F S ++ I+SL +N AY+SEIIR I+SI GQ + Sbjct: 85 TPMMVQLLIMGF------VIFSSSTHYYMIAILSLGINSGAYVSEIIRGGIMSIDPGQME 138 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A ++G+ ++ II+PQ I L +E I++ K TS+ S I + E+ + A+ I + Sbjct: 139 AGRSLGMGYATVMKDIIIPQAIKNILPALGNELITLFKDTSLVSVIGMTELTKVARDIQA 198 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIK 212 TY PL+ Y +A +YLI+ +Q K Sbjct: 199 RTYLPLMPYIGIAVMYLIVVMILTYLQGK 227 >gi|240947950|ref|ZP_04752377.1| arginine transporter permease subunit ArtM [Actinobacillus minor NM305] gi|257465092|ref|ZP_05629463.1| arginine transporter permease subunit ArtM [Actinobacillus minor 202] gi|240297744|gb|EER48203.1| arginine transporter permease subunit ArtM [Actinobacillus minor NM305] gi|257450752|gb|EEV24795.1| arginine transporter permease subunit ArtM [Actinobacillus minor 202] Length = 224 Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 116/209 (55%), Gaps = 13/209 (6%) Query: 21 IVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVI 77 I +P + SL+I F IAV F + I+ ++ Y+ +F GTPLLVQ F+I Sbjct: 8 IAQGIPTSLGLMATSLVIAFVIAVFFTFLLSMENKIVKGFVNGYLMLFTGTPLLVQFFLI 67 Query: 78 FYGLPH--------IGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 + G + I+F D++ +++L LN +AY +++ ++ +IPKGQW+ A+ Sbjct: 68 YSGPGQFQWLIDSPLWILFSDAWFCAVLALALNSAAYSTQLFHGAVKAIPKGQWETCAAL 127 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+R T++ I++P + + S+E I + K TS+ASTITI +I A+++ T Y Sbjct: 128 GLSRLDTLK-ILIPYALKRALPSYSNEIILVFKGTSLASTITILDIMGYARQLYGTEYDA 186 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSV 217 + IY +YL++T I+ K+E V Sbjct: 187 IGIYSMAGLIYLVITGIMTILLRKLEHKV 215 >gi|228909989|ref|ZP_04073809.1| Arginine transport system permease protein artQ [Bacillus thuringiensis IBL 200] gi|228849506|gb|EEM94340.1| Arginine transport system permease protein artQ [Bacillus thuringiensis IBL 200] Length = 225 Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 122/215 (56%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I+ S P +L + VTL I +S + I+G +A+ +I +++ FY IF Sbjct: 11 FSAIMPSIPYIL-KGLEVTLKIVAVSALAGFILGTLLALCKIA-RIRALNIAADFYTSIF 68 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P I G +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 69 RGTPLVLQLMIIYFGVPQIIGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 128 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 129 AMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 188 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y +L ++ IE + + Sbjct: 189 TFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKK 223 >gi|187779364|ref|ZP_02995837.1| hypothetical protein CLOSPO_02960 [Clostridium sporogenes ATCC 15579] gi|187772989|gb|EDU36791.1| hypothetical protein CLOSPO_02960 [Clostridium sporogenes ATCC 15579] Length = 188 Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 56/164 (34%), Positives = 95/164 (57%), Gaps = 10/164 (6%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD----------SFVAIIISLT 99 + ++ I Y+ RGTP+LVQL++I+YGLP IGI F F A I++L+ Sbjct: 5 KNKVLKYIAVSYIEFIRGTPVLVQLYIIYYGLPTIGINFPEVPILGSNFPDFFAGILALS 64 Query: 100 LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISI 159 +N AY++EIIR+ I ++ KGQ +A+ ++G++ ++++I+PQ L +EFI+I Sbjct: 65 INSGAYVAEIIRAGIQAVDKGQMEAARSLGMSESMAMKNVIIPQAFKNILPALGNEFITI 124 Query: 160 LKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +K +S+ S I I E+ A + ++P A +Y I+T Sbjct: 125 IKESSIVSIIGIHELMYNADTVRGNIFKPFEPLLVAAVMYFIMT 168 >gi|156973842|ref|YP_001444749.1| ABC transporter permease [Vibrio harveyi ATCC BAA-1116] gi|156525436|gb|ABU70522.1| hypothetical protein VIBHAR_01552 [Vibrio harveyi ATCC BAA-1116] Length = 225 Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 115/203 (56%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LII+SFP L + T+ + ++ VI L + +A+ R ++ +SL +++ F Sbjct: 3 FSLIIESFPVYL-DGLWTTVWLVALALVIGLCVSIPLAIARNS-TNYALSLPSWAFIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQFSPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G+++ T R IILP + + S+E I +L ++VA ITI ++ A+ Sbjct: 121 EVEAAKAYGMSKFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIITIMDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFESFLTAGLFYMALT 203 >gi|119025489|ref|YP_909334.1| permease protein of ABC transporter system [Bifidobacterium adolescentis ATCC 15703] gi|154486921|ref|ZP_02028328.1| hypothetical protein BIFADO_00754 [Bifidobacterium adolescentis L2-32] gi|118765073|dbj|BAF39252.1| permease protein of ABC transporter system [Bifidobacterium adolescentis ATCC 15703] gi|154084784|gb|EDN83829.1| hypothetical protein BIFADO_00754 [Bifidobacterium adolescentis L2-32] Length = 327 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 75/239 (31%), Positives = 127/239 (53%), Gaps = 31/239 (12%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++EW + F + + I TL + IS VI++I+ +AV+R + ++ + FY Sbjct: 50 RFEWNVVWKYLFNENVLEGIKYTLLLTVISMVIAIILAVILAVMRKSI-NPVLRGVSWFY 108 Query: 62 VWIFRGTPLLVQLFVIFYGL-----PHIGI----------------VFDSFVAIIISLTL 100 +W FRGTP+ QL +F+GL P IG+ V +F A + L L Sbjct: 109 IWFFRGTPVYTQL--VFWGLFAVLVPRIGVGIPFTSIEFWSIDSQSVITAFNAAWLGLAL 166 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N +AY++EI+R+ + ++ GQ +A+ A+G+ R +R I+LPQ + P +EFI +L Sbjct: 167 NEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRTLIMRRIVLPQAMRIIIPPTGNEFIGML 226 Query: 161 KSTSVASTITIPEIFQTAQRIVSTT-YQP---LIIYCELAFVYLILTSFCYIIQIKIES 215 K+TS+ + + Q A ++T Y+P LI+ C YL++TS +IQ ++E Sbjct: 227 KTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVAC---IWYLVITSILMVIQSRLEK 282 >gi|225163909|ref|ZP_03726201.1| polar amino acid ABC transporter, inner membrane subunit [Opitutaceae bacterium TAV2] gi|224801486|gb|EEG19790.1| polar amino acid ABC transporter, inner membrane subunit [Opitutaceae bacterium TAV2] Length = 216 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 57/155 (36%), Positives = 97/155 (62%), Gaps = 8/155 (5%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPH---IGIVFDSFVAIIISLTLNFSAYISEII 110 +SL ++ Y+W+ RGTPL++Q+ I++ LP IGI F A +++ LN++AY +EI Sbjct: 47 VSLAVNGYIWLMRGTPLMLQMLFIYFALPFVPVIGIRLPDFPAAVVAFALNYAAYFAEIF 106 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R+ I SI KGQ++ + +G + QT+R I+LPQ + P+S+E I+++K TS+ + Sbjct: 107 RAGIQSIDKGQYEGARVLGFSYPQTMRRIVLPQMVKRILPPMSNETITLVKDTSLIYVLA 166 Query: 171 IPEIFQTAQRIVST--TYQPLIIYCELAFVYLILT 203 + ++ + A+ IV T P I+ AF YL++T Sbjct: 167 LNDLLRAARGIVQRDFTTSPFIVAA--AF-YLLMT 198 >gi|220928329|ref|YP_002505238.1| polar amino acid ABC transporter inner membrane subunit [Clostridium cellulolyticum H10] gi|219998657|gb|ACL75258.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium cellulolyticum H10] Length = 210 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 69/192 (35%), Positives = 113/192 (58%), Gaps = 12/192 (6%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 LL +VV+L I ++ + ++ +G I+ R IIS + Y+ I RGTPL++QL Sbjct: 6 LLLEGMVVSLQIFALTLIFAIPLGLVISFGR-RAKHIIISGVTSIYISIMRGTPLILQLL 64 Query: 76 VIFYGLPHIGIVFDS----FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 V+++ + VFD+ F A +I+ LN++AY +EI R I SIPKGQ++A +G T Sbjct: 65 VVYFAPSY---VFDAKVGRFTAAVIAFILNYAAYFAEIFRGGIESIPKGQYEAGEVLGFT 121 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTYQPL 189 + Q IILPQ I P+S+E I+++K T++ + I + E+F+ AQ S ++ +PL Sbjct: 122 KLQVFFKIILPQVIKRVLPPISNEVITLVKDTALVTVIGVEEMFRIAQNASSRVSSVRPL 181 Query: 190 IIYCELAFVYLI 201 + AF Y++ Sbjct: 182 --FVAGAFYYVM 191 >gi|260777100|ref|ZP_05885994.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] gi|260606766|gb|EEX33040.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] Length = 265 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 65/195 (33%), Positives = 120/195 (61%), Gaps = 6/195 (3%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL-IMHFYVWIFRGTP 69 + +P L + VT+ I+ S + +L+IG A++++ S +++ I + Y+ + R TP Sbjct: 54 EWWPAELLEGLWVTIKISAWSLLFTLLIGMLTALLKL--SQSVVGRTIANTYIELIRNTP 111 Query: 70 LLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 LLVQ++++++ P IG+ D F I++L+L AY +EI R + SIPKGQ++A+ ++ Sbjct: 112 LLVQIYLLYFVFGPVIGL--DRFATAILALSLFQGAYTAEIFRGGLNSIPKGQFEAARSL 169 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+ T +I PQ + + PL++E +S++K++S+ S + I ++ + IVS T P Sbjct: 170 GLSPFSTYYDVIFPQLLQRTLPPLTNEVVSLVKNSSIVSVMAIFDLTTEGRNIVSETAMP 229 Query: 189 LIIYCELAFVYLILT 203 I+ +A +YL+LT Sbjct: 230 FEIWFSVAAIYLLLT 244 >gi|139438499|ref|ZP_01772015.1| Hypothetical protein COLAER_01007 [Collinsella aerofaciens ATCC 25986] gi|133776038|gb|EBA39858.1| Hypothetical protein COLAER_01007 [Collinsella aerofaciens ATCC 25986] Length = 682 Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 62/215 (28%), Positives = 119/215 (55%), Gaps = 9/215 (4%) Query: 14 PQLLYAAIV-------VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 PQ++ +I + L + I F +++ IG A ++I S + + + Y+ + R Sbjct: 468 PQIIVTSIASLFKGWGIALAVTAIGFPLAIPIGLLFAFMKISHSRMLRGIAVT-YINVLR 526 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPL +Q+++ F+G P IG+ + + L +N SAY++EI R+ I S+P GQ +A+Y Sbjct: 527 GTPLFLQIYIAFFGFPMIGLNVPNLPLGVGVLAINCSAYLAEIFRAGIESVPHGQAEAAY 586 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+T Q + I++PQ + ++SEF+ + K TS+ S++ + E+ ++ + +TT Sbjct: 587 SLGMTWSQVMSRIVVPQAVRYVIPTMTSEFVMLYKDTSLLSSVGVMELMLFSKNLTATTG 646 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + Y A YL++T I K+E + + + Sbjct: 647 N-ITPYICAALYYLVVTIPLIHIVTKVEHRLAERS 680 >gi|307544385|ref|YP_003896864.1| ABC transporter permease [Halomonas elongata DSM 2581] gi|307216409|emb|CBV41679.1| ABC-type transport system permease protein [Halomonas elongata DSM 2581] Length = 224 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 65/183 (35%), Positives = 111/183 (60%), Gaps = 8/183 (4%) Query: 42 IAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF----DSFVAIIIS 97 +AVIR+ + + M F + FRGTPLLVQLF+ +YGLP + + F + A I+ Sbjct: 41 LAVIRVLKIPGLNAATMLF-ISFFRGTPLLVQLFLFYYGLPQL-LDFLTQINGITATIMG 98 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP-LSSEF 156 LTL+FSAY++E IR++I+ + + Q +A+ +IG+T Q +R I+LPQ T AVP L + F Sbjct: 99 LTLHFSAYMAESIRAAIVGVDRSQTEAALSIGMTNGQLMRRIVLPQA-TRVAVPTLMNYF 157 Query: 157 ISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 I ++K+TS+A T+ + E+ Q+ + ++ + +A VY ++ Q ++E+ Sbjct: 158 IDMIKATSLAFTLGVTELMGATQKEAAGSFLYFEAFVTVAVVYWVIVELLAWGQRRLETR 217 Query: 217 VTQ 219 + + Sbjct: 218 LNK 220 >gi|15890240|ref|NP_355912.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15158430|gb|AAK88697.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 230 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 105/187 (56%), Gaps = 1/187 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VTL A F I+L++G A++R +IS V R TPLLVQLF ++Y Sbjct: 26 GLTVTLKAAAAGFAIALVLGLVFALLR-RSRVKLISWPTAVVVEFLRDTPLLVQLFFLYY 84 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 LP GIV +F+ ++L L ++AY SE+ R + ++ GQW+A+ A+ LTR QT R I Sbjct: 85 VLPEFGIVLPAFLTGALALGLQYAAYTSEVYRGGMEAVHHGQWEAATALNLTRMQTYRDI 144 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I+PQ I + + ++++K T V S +T+ E+ A I T++ L+ + ++ Sbjct: 145 IIPQAIPRIVPAMGNYLVAMIKETPVLSVVTVLEMMGLANMIGERTFEYLVPLTLVGLIF 204 Query: 200 LILTSFC 206 L+LT C Sbjct: 205 LLLTIIC 211 >gi|170735823|ref|YP_001777083.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169818011|gb|ACA92593.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 218 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 116/205 (56%), Gaps = 4/205 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++W + I + P L+ + +T+ IA + V I+G + R + ++++ Sbjct: 1 MNFDW-SAIWAALPDLM-DGVRLTVFIALLGLVGGFIVGMIAGMFRAY-GPKAMNVLAQV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + RGTP++VQ+ +++ LP + I D A II++T+N AY++E++R +++SIPK Sbjct: 58 YIELIRGTPIVVQVMFLYFALPLLAHIRIDGLTAAIIAITVNSGAYLAEVVRGALLSIPK 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G +A A+GL+ + + I+ P PL ++ I LK TS+ I + E+ + Q Sbjct: 118 GLTEAGLAMGLSMPRVLLKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRKGQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILTS 204 I++ +Q + I+ +A +YLILT Sbjct: 178 EIIAGNFQAVEIWSAVAVIYLILTG 202 >gi|157693149|ref|YP_001487611.1| glutamine ABC transporter membrane protein [Bacillus pumilus SAFR-032] gi|157681907|gb|ABV63051.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus SAFR-032] Length = 216 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 67/163 (41%), Positives = 96/163 (58%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L VTL +A IS ++S +IG I +R F I+S I+ V R PLL+ +F Sbjct: 15 LLEGFAVTLKVAFISIILSFLIGLVIGTLR-FAQIPILSKILAVVVETIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP IGI + I +LT+ SA +SEIIRS + SI KGQ +A+ + G T QT+ Sbjct: 74 TYFALPEIGIKLSITASAIAALTVFESAMLSEIIRSGLKSIDKGQIEAARSSGFTYIQTL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 + II+PQ + P+ S+FIS+LK TS+A I +PE+ AQ Sbjct: 134 KMIIMPQALRRMVPPIVSQFISLLKDTSLAVVIALPELLHHAQ 176 >gi|117928847|ref|YP_873398.1| polar amino acid ABC transporter, inner membrane subunit [Acidothermus cellulolyticus 11B] gi|117649310|gb|ABK53412.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Acidothermus cellulolyticus 11B] Length = 559 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 63/194 (32%), Positives = 111/194 (57%), Gaps = 1/194 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ + + I ISF +++ +A++R+ ++ +++ YVW+ RGTPLL+QL Sbjct: 13 LWQGLATAVEITVISFALAIPPSIAVALMRLSKWRSV-RVLLWPYVWVMRGTPLLLQLLF 71 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 F LP +G F +I+L LN A+ EII+ I ++ Q +A A+G++R + Sbjct: 72 WFDILPTLGFRVSPFTTAVIALVLNEIAFSGEIIKGGISAVKSAQREAGLALGMSRWTIL 131 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +ILPQ + A LS+E I +LK+TS+AS I + E+ +Q+IV+ ++ L ++ Sbjct: 132 HRVILPQAFRSIAPALSNELIIMLKNTSLASVIAVDELTLRSQQIVAVNFEYLAVFGAAG 191 Query: 197 FVYLILTSFCYIIQ 210 +YLI +S ++Q Sbjct: 192 ALYLIASSAVTVLQ 205 >gi|167461574|ref|ZP_02326663.1| Glutamine transport system permease protein glnP [Paenibacillus larvae subsp. larvae BRL-230010] Length = 217 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 63/157 (40%), Positives = 99/157 (63%), Gaps = 1/157 (0%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL +A +S V+S IIG + ++R + ++S ++ +V + R PLL+ +F + + LP Sbjct: 21 ITLWMAAVSIVLSFIIGSILGILR-YTRIPVVSQLVLLWVEMIRNLPLLLIIFFVRFALP 79 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 +GI FD + II+LT+ SA ISEIIR + SI KGQ +A+ + GLT QT+ HII P Sbjct: 80 EVGIKFDVITSAIIALTVFESAMISEIIRGGLNSIEKGQIEAARSSGLTYIQTLWHIIFP 139 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q + P S+FIS+LK TS+A I+ P++ + + Sbjct: 140 QAVKRMVPPTVSQFISLLKDTSLAVIISAPDLMRNVE 176 >gi|262274650|ref|ZP_06052461.1| ABC-type arginine/histidine transport system permease component [Grimontia hollisae CIP 101886] gi|262221213|gb|EEY72527.1| ABC-type arginine/histidine transport system permease component [Grimontia hollisae CIP 101886] Length = 240 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 63/195 (32%), Positives = 116/195 (59%), Gaps = 10/195 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 ++ + VT+ + +S V+ LI+ +A+ R + ++ + F+V+IFRGTPLL+QL++I Sbjct: 24 WSGLTVTVQLVFLSLVLGLIVAVPLAIARAS-KNPWVNRPVWFFVYIFRGTPLLIQLYLI 82 Query: 78 FYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +YG+ I +V D+F +++ LN +AY +EI+R ++++ P G+ +A A Sbjct: 83 YYGVATIEGIQQSMFWAVVEDAFYPCLLAFVLNTAAYTTEILRGAMVATPAGEIEAGKAY 142 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G++R +R IILP + + S+E I +L ++S+AS +TI ++ A+ I + Y P Sbjct: 143 GMSRFTILRRIILPSSFRRALPAYSNEVIFMLHASSIASVVTIIDLTGAARDIYARFYAP 202 Query: 189 LIIYCELAFVYLILT 203 + +A +YL LT Sbjct: 203 FDAFLFVAAIYLCLT 217 >gi|116670156|ref|YP_831089.1| polar amino acid ABC transporter inner membrane subunit [Arthrobacter sp. FB24] gi|116610265|gb|ABK02989.1| amino acid ABC transporter membrane protein, PAAT family [Arthrobacter sp. FB24] Length = 271 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 121/202 (59%), Gaps = 6/202 (2%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 +++L+ +SFP L+ + T+ + ISF ++++IG F+ ++I S ++ I +V I Sbjct: 58 FWDLLANSFPALM-KGLGNTVLVTAISFALAMLIGLFMGFLKISTS-VVLRGIATTFVSI 115 Query: 65 FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTPLLV F ++G+P + G D +VA +++L+LN AYI+EI+R SI S+ GQ + Sbjct: 116 FRGTPLLVWAFFFYFGIPQLTGQPIDIWVAGVLTLSLNAGAYITEIVRGSIQSVDPGQLE 175 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AS ++GL ++++ +++PQ L ++ I +LK +S+ I E+ Q+I + Sbjct: 176 ASRSLGLGYAKSMQKVVVPQAFKIMTPSLINQLIIMLKDSSLLLAIGFAELLYQGQQIYA 235 Query: 184 TTY---QPLIIYCELAFVYLIL 202 + + L+I L FV ++L Sbjct: 236 GNFRITETLLIVAVLYFVVIML 257 >gi|330505510|ref|YP_004382379.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas mendocina NK-01] gi|328919796|gb|AEB60627.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina NK-01] Length = 229 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 119/207 (57%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + LI P++ A++ T+ + ++ + LI+ + + R + + + Y++ F Sbjct: 3 WELIYKYLPKMFEGALL-TVELLAVAVIAGLILALPMGIARAS-KHWYVRALPYGYIFFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V D + ++++TL+ +AYI+EI+R +I + Sbjct: 61 RGTPMLVQLFLIYYGLAQFDAVRQSVFWPYLRDPYWCAVLTMTLHTAAYIAEILRGAIQA 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P G+ +A+ A+G++R Q + HIILP+ S+E I +LK++++AST+T+ E+ Sbjct: 121 VPPGEIEAARALGMSRAQAMLHIILPRAARIGLPAYSNEVILMLKASALASTVTLLELTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + TY + + A YL +T Sbjct: 181 MARTLNARTYVSMEFFFTAALFYLAIT 207 >gi|226314122|ref|YP_002774018.1| amino acid ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226097072|dbj|BAH45514.1| amino acid ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 229 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 125/215 (58%), Gaps = 7/215 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIF 65 ++ + S+P L A +T+ + ++ ++ ++G IA RI SD+ ++ I H Y+ + Sbjct: 4 DIFLSSYP-LFLKATWLTVQLTAVALILGCVVGLVIAFFRI--SDSKALNYIAHTYITVI 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++GL ++ + F A I+L ++ AYI+EI R SI SI +GQ +AS Sbjct: 61 RGTPLIVQICILYFGLANM-VTLSQFWAGAIALAVHNGAYIAEIFRGSIQSIDRGQMEAS 119 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G++ +R IILPQ + L ++FI LK +S+ + + + +++ T ++ Sbjct: 120 RSLGMSYPLAMRRIILPQAFRRAIPSLGNQFIIGLKDSSLVAYVGMQDLWGTGLGEAASN 179 Query: 186 YQPLIIYCELAFVYLILTS-FCYIIQIKIESSVTQ 219 Y+ L Y + YL+L F Y + K+E+ + + Sbjct: 180 YKQLETYMVVGLYYLVLIMIFSYFVN-KLEARLAK 213 >gi|330829215|ref|YP_004392167.1| histidine/lysine/arginine/ornithine ABC transporter permease [Aeromonas veronii B565] gi|328804351|gb|AEB49550.1| ABC-type histidine/lysine/arginine/ornithine transporter, permease protein [Aeromonas veronii B565] Length = 230 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 66/224 (29%), Positives = 123/224 (54%), Gaps = 11/224 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I+ +P + + T+ + +S ++ L++ + ++R + +I + Y++ F Sbjct: 3 FSIILKEWPTY-WEGLYTTVWLVALSLILGLMLAVPMGILRNS-RNWLIKGPIWAYIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+I+YG + +S + +++ TLN +AY +EI+R ++ + Sbjct: 61 RGTPLLVQLFIIYYGAAQWEWLKNSAAWSLFSEAWFCALLAFTLNTAAYTAEIVRGAVHN 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ +A+ A G+TR QT+ IILP + + S+E I +L+ ++VA ITI ++ Sbjct: 121 MPRGQIEAANAFGMTRWQTLTRIILPNSFRRALPAYSNEVIFMLQGSAVAGIITIVDLTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 A+ I S Y P + +Y++LT + K E+ H Sbjct: 181 AARIINSRYYSPFEAFLTAGLLYMLLTFVIVWLFKKWEARWHAH 224 >gi|125974764|ref|YP_001038674.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium thermocellum ATCC 27405] gi|256005224|ref|ZP_05430191.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium thermocellum DSM 2360] gi|281418767|ref|ZP_06249786.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium thermocellum JW20] gi|125714989|gb|ABN53481.1| amino acid ABC transporter membrane protein, PAAT family [Clostridium thermocellum ATCC 27405] gi|255990775|gb|EEU00890.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium thermocellum DSM 2360] gi|281407851|gb|EFB38110.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium thermocellum JW20] gi|316941898|gb|ADU75932.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium thermocellum DSM 1313] Length = 236 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 57/173 (32%), Positives = 103/173 (59%), Gaps = 5/173 (2%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYG-LPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 I++ I FYV +FRGTP++VQL V +Y LP +GI + ++ LN AY+SEI+R Sbjct: 64 ILNAICDFYVGLFRGTPVVVQLLVAYYVVLPLLGINLSALTVCVLVFGLNSGAYVSEIMR 123 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S I+S+ GQ +A A+GL+ + T+ I++PQ + L +EFI+++K TSV S + Sbjct: 124 SGIMSVDHGQMEAGRALGLSYRVTMLKIVIPQAVKNILPTLGNEFIALIKETSVVSFVGA 183 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVY----LILTSFCYIIQIKIESSVTQH 220 +++ I + +Y+ ++ Y +A +Y +I+ S +++ ++ S ++ Sbjct: 184 ADLYVAFSYIGTNSYEFMVPYLAMALIYIALVMIIASLIKVMERRLRKSDRRN 236 >gi|322385753|ref|ZP_08059397.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] gi|321270491|gb|EFX53407.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] Length = 213 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 66/170 (38%), Positives = 99/170 (58%), Gaps = 10/170 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----ISLIMHFYVWI 64 I++ P LL A TL + + V S+ +G +A FS I + ++H Y+WI Sbjct: 4 ILEILPSLLSGA-ATTLQVFALVLVFSIPLGIMLA-----FSMQIRLKPLQWLLHIYIWI 57 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLL+QL I+Y LP +GI D A II+ TLN++AY +EI R I SIP GQ++A Sbjct: 58 MRGTPLLLQLIFIYYVLPSLGIRLDRIPAAIIAFTLNYAAYFAEIFRGGISSIPTGQYEA 117 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 + + T QTIR IILPQ + + +E ++++K TS+ + I ++ Sbjct: 118 AKVLKFTPVQTIRLIILPQVVKIVLPSVFNEVMTLVKDTSLVYALGISDL 167 >gi|293375604|ref|ZP_06621878.1| ABC transporter, permease protein [Turicibacter sanguinis PC909] gi|292645821|gb|EFF63857.1| ABC transporter, permease protein [Turicibacter sanguinis PC909] Length = 219 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 104/178 (58%), Gaps = 1/178 (0%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I ++ + A +T+ IA + ++S ++GF +IR ++ I+ ++ Y+ + R TP Sbjct: 6 IKTYAPMYVEAAKLTMSIALLGILLSTLVGFICCLIR-YYKIPILQRVIGMYIELSRNTP 64 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+QLF +++GLP +GI S+ ++ LT +Y++E RS + SIP Q ++ ++G Sbjct: 65 LLIQLFFLYFGLPKLGIFLSSYACGVLGLTFLGGSYMAEAFRSGLESIPDIQMESGLSLG 124 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 LT+ Q +R+II PQ + S S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 125 LTKWQVLRYIIFPQAVAVSLPAFSANVIFLIKETSVFSVVALADLMYVAKGLIGLYYK 182 >gi|213029271|ref|ZP_03343718.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 199 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 111/198 (56%), Gaps = 3/198 (1%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I+ + L+IG R F + I ++ I RGTP++VQ+ I++ LP Sbjct: 1 MTLWISVLGLAGGLVIGLAAGFARTF-GGWFANHIALVFIEIIRGTPIVVQVMFIYFALP 59 Query: 83 HI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 + D F A ++++ +N AYI+EI R +++SI KG +A A+GL+R++TIRH+I Sbjct: 60 MAFNDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETIRHVI 119 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LP + PL +++I +K TS+ I + E+ + Q I++ ++ L I+ +A YL Sbjct: 120 LPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYL 179 Query: 201 ILTSFCYIIQIKIESSVT 218 I+T I ++E + Sbjct: 180 IITLVLSFILRRLERRMK 197 >gi|302023820|ref|ZP_07249031.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis 05HAS68] Length = 643 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 125/222 (56%), Gaps = 19/222 (8%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIG-----FFIAVIRIFFSDTIISLIMHFY 61 L+ +++ QLL + + +T+ +A +SF I+++IG F ++ ++ + + + Sbjct: 427 GLLKNNYGQLL-SGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKA------LRVTSSVF 479 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-----GIV--FDSFVAIIISLTLNFSAYISEIIRSSI 114 V + RG PL++ IF+G+P++ G + FVA I+L+LN AYI+EI+R I Sbjct: 480 VDVVRGIPLMIVAAFIFWGIPNLIESITGQQSPINDFVAGTIALSLNSGAYIAEIVRGGI 539 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++P GQ +AS ++G++ T+R IILPQ ++F+ LK T++ S I + E+ Sbjct: 540 QAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTTIISAIGLVEL 599 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 FQ + I++ YQ +Y LA +YL++ + + K+E Sbjct: 600 FQAGKIIIARNYQSFRMYAILAIIYLVVITLLTRLARKLEKG 641 >gi|241554229|ref|YP_002979442.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863535|gb|ACS61197.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 222 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 62/180 (34%), Positives = 102/180 (56%), Gaps = 2/180 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+I ++FP++L A + T+ I ++ + +GF +AV R F + + + R Sbjct: 6 NVIFNNFPEILSGAWL-TIVIWIVTTPAAAALGFLVAVAR-RFGGVVPDKAFGVVIAVLR 63 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTP L+Q+F+++YG P +G+ D A +I L++ +AY SEI RS ++PKG +A Sbjct: 64 GTPFLIQIFLVYYGGPFVGLSLDPIPAGVIGLSIYGAAYFSEIFRSGFAAVPKGHIEAGL 123 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +GLT+ Q +R I+LP+ P + I ++K T+V S IT+PE+ T I S Y Sbjct: 124 CVGLTQGQIVRRILLPEMTMLVLPPSVNMTIILMKETAVLSIITVPELTATLSAIGSQQY 183 >gi|325523728|gb|EGD01988.1| putative ABC transporter permease [Burkholderia sp. TJI49] Length = 255 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/234 (26%), Positives = 125/234 (53%), Gaps = 25/234 (10%) Query: 1 MKYEWFNLIIDSFPQLLYA-------AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI 53 M + W D F + L+A + +T+ I+ + + ++G +A++R S+ Sbjct: 1 MNFSW-----DIFSRFLWAPSPTYLHGLALTVVISLCAIALGAVLGLVVALMRSS-SNRA 54 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI------------VFDSFVAIIISLTLN 101 + ++ YVW+ RGTPLLVQ+ ++ + + + A +++L +N Sbjct: 55 LQVLARGYVWVMRGTPLLVQIVFLYTAFAAANVFRFHDLDFGWITLPGNIQAAVLALGMN 114 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 +AY++EIIR+ + S+ +GQ++AS ++G+ +R I+LPQ + P+ +E +LK Sbjct: 115 SAAYMAEIIRAGLGSVDRGQYEASRSLGMPTMLLMRRIVLPQALRVIVPPMGNEVNVMLK 174 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +T++ S I + E+ + Q I S ++ +Y LA +L+LT+ +Q +IE+ Sbjct: 175 NTTLVSVIGVQELLLSTQMITSVNFRVFELYLVLAIYFLLLTTLWGFVQRRIEA 228 >gi|237752284|ref|ZP_04582764.1| glutamine ABC transporter permease GlnP [Helicobacter winghamensis ATCC BAA-430] gi|229375773|gb|EEO25864.1| glutamine ABC transporter permease GlnP [Helicobacter winghamensis ATCC BAA-430] Length = 221 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 108/177 (61%), Gaps = 2/177 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 ++ P L A+ +TL ++ V S+I+GFFIA+I+ F+ ++ + Y+ + R TPL Sbjct: 12 NAIPTFL-KALWLTLHLSFFGIVFSIILGFFIALIQ-FYKIRFLNAVAQGYIELSRNTPL 69 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L+QLF ++YGLP IG+ DS++ +I +T +Y++E R+ + S+ K Q ++ ++GL Sbjct: 70 LIQLFFLYYGLPQIGLKLDSYICALIGITFLGGSYMAESFRAGLESVGKIQIESGRSLGL 129 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 + KQ + IILPQ++ S + + I +LK TSV S I + ++ + ++ + Y+ Sbjct: 130 SEKQLVFSIILPQSLMVSLPYIGANVIFLLKETSVVSAIALVDVLFVTKDLIGSYYK 186 >gi|320095230|ref|ZP_08026930.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces sp. oral taxon 178 str. F0338] gi|319977834|gb|EFW09477.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces sp. oral taxon 178 str. F0338] Length = 256 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 100/172 (58%), Gaps = 2/172 (1%) Query: 17 LYA-AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 LYA A V+T+ IA I SL +G A + F +I I+ YV + R TPLLVQLF Sbjct: 49 LYAKAAVLTVKIAAIGIAGSLAVGLVCAAV-TQFRIPVIGRIVTAYVELSRNTPLLVQLF 107 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I++GLP +G+ + ++ L AY++E +R+ + S+ QW+++ ++GL+ Q Sbjct: 108 FIYFGLPRVGVKWSGETCAVVGLVFLGGAYMAEALRAGLDSVAPIQWESAASLGLSPAQV 167 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +R + LPQ + S PL++ I ++K TSV S + +P++ A+ ++ +Y Sbjct: 168 LRFVALPQALAVSVPPLAANTIFLIKETSVVSVVALPDLVYVAKDLIGISYN 219 >gi|158424357|ref|YP_001525649.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158331246|dbj|BAF88731.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 278 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 110/201 (54%), Gaps = 14/201 (6%) Query: 34 ISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG---LPHIGI---- 86 + +++G A++R+ + + + M YVW+FRGTP+++QL + F P +GI Sbjct: 75 VGIVLGVITAIMRMSPNPVLRGVAMG-YVWLFRGTPVILQLLLWFNLALIFPRLGISGWW 133 Query: 87 ------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 V VA ++ L +N AY SE++R+ ++++ GQ++A+ AIG+TR +R I+ Sbjct: 134 TVRTVEVMTPVVAALLGLGINQGAYTSEVVRAGLLAVDTGQYEAAKAIGMTRLLALRRIV 193 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LPQ + PL +EFI ++K TS+AS I EI +AQ I + + + A YL Sbjct: 194 LPQAMRVIIPPLGNEFIGMVKLTSLASVIQFTEILHSAQNIYYANSRVIELLIVAAIWYL 253 Query: 201 ILTSFCYIIQIKIESSVTQHT 221 + S +Q+ +E + T Sbjct: 254 AIVSLLTPLQMLLERRFARGT 274 >gi|169350594|ref|ZP_02867532.1| hypothetical protein CLOSPI_01363 [Clostridium spiroforme DSM 1552] gi|169292914|gb|EDS75047.1| hypothetical protein CLOSPI_01363 [Clostridium spiroforme DSM 1552] Length = 523 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/170 (37%), Positives = 102/170 (60%), Gaps = 9/170 (5%) Query: 42 IAVIRIFFSDTIISLIMHFYVW--------IFRGTPLLVQLFVIFYGLPHIGIVFDSFVA 93 I I++ D++IS I+ VW IFRGTP++VQ I+YGL +I + + F A Sbjct: 326 IRAIKVEERDSLISKIVKRVVWFITTVYIEIFRGTPMMVQGAFIYYGLKNI-VHWSPFTA 384 Query: 94 IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS 153 + +T+N AY++EIIRS I ++ KGQ +A+ +IG+ QT+ +I+LPQ I S + Sbjct: 385 GVFVITINTGAYMAEIIRSGIQAVDKGQSEAARSIGMNSVQTMLYIVLPQAIKNSFPAIG 444 Query: 154 SEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +EF+ +K +SV + I + E+F A+ + + Y + Y +A +YL LT Sbjct: 445 NEFVINIKDSSVLNVIAVTELFYQAKSVAGSLYAFVPTYFVVALIYLCLT 494 >gi|162147152|ref|YP_001601613.1| inner membrane amino-acid ABC transporter permease [Gluconacetobacter diazotrophicus PAl 5] gi|161785729|emb|CAP55300.1| putative inner membrane amino-acid ABC transporter permease protein [Gluconacetobacter diazotrophicus PAl 5] Length = 499 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 64/175 (36%), Positives = 112/175 (64%), Gaps = 2/175 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL+ A V+TL ++ + V+++ +G +A++R + + +L YV I RGTPLL+ Sbjct: 287 LPLLLHGA-VLTLAVSACAMVVAVGLGLALALLRRYGPRWLGALAT-LYVEIVRGTPLLI 344 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 Q+ IFY LP IG+ FVA +++L +N++AY +E R+ + S+ +GQ +A+ A+ +T Sbjct: 345 QILFIFYALPGIGLRLSPFVAGVVALGMNYAAYEAENYRAGLQSVARGQVEAALALNMTH 404 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 Q +R +++PQ + ++++FIS+LK +S+ S IT+ E+ QT R+ ST Y Sbjct: 405 MQALRFVVVPQAVRMVIPVMTNDFISLLKDSSLVSVITLTELSQTYVRLSSTYYD 459 >gi|120403817|ref|YP_953646.1| polar amino acid ABC transporter inner membrane subunit [Mycobacterium vanbaalenii PYR-1] gi|119956635|gb|ABM13640.1| amino acid ABC transporter membrane protein, PAAT family [Mycobacterium vanbaalenii PYR-1] Length = 308 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 122/214 (57%), Gaps = 27/214 (12%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFVIFYGL- 81 TL + S +I +++G F+ V+R+ SD ++S + ++WIFRGTP+ VQL F+GL Sbjct: 71 TLQLTIYSMIIGIVLGVFLTVMRL--SDNPVLSSVAWVFLWIFRGTPIYVQL--AFWGLF 126 Query: 82 P------HIGIVFDS-------------FVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 P +G+ F FV +I L LN +AY++EI+R+ I+S+P+GQ Sbjct: 127 PTIYQNIQLGVPFGPSFFHLDLQDLSIPFVLAVIGLGLNEAAYMAEIVRAGIMSVPEGQM 186 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP-EIFQTAQR- 180 +AS A+G++ + +R +LPQ + P +E IS+LK+TS+ + + +++ A R Sbjct: 187 EASTALGMSWGKAMRRTVLPQAMRVIIPPTGNELISLLKTTSLVTAVPYAFDVYSIATRE 246 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I + ++P+ + A YL++TS + Q +E Sbjct: 247 IAARIFEPVPLLLVAAAWYLVITSILMVGQFYLE 280 >gi|332703509|ref|ZP_08423597.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio africanus str. Walvis Bay] gi|332553658|gb|EGJ50702.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio africanus str. Walvis Bay] Length = 294 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 69/235 (29%), Positives = 117/235 (49%), Gaps = 29/235 (12%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P LL V TL +A + +++LI G + R+ S + L YV R TP LV Sbjct: 59 PGLLLKGFVATLRLAAWTMLLALIAGVAAGLCRVSRS-LFLRLCARTYVETMRNTPPLVL 117 Query: 74 LFVIF-----------------YGLPHIG-----------IVFDSFVAIIISLTLNFSAY 105 +F+ + YGL +F++ + +L L AY Sbjct: 118 VFLFYFFVGDWIMTALGAQELAYGLSEAWQERLAWIMAPPGRLAAFLSALTTLALYEGAY 177 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 I+EI+RS + SI +GQW+A+YA+GL+R Q I +ILPQ + PL+ +FIS +K +S+ Sbjct: 178 IAEIVRSGVQSIERGQWEAAYALGLSRWQRITRVILPQALRRMVPPLAGQFISTIKDSSI 237 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + I+IPE+ +++ TY+ I+ + +YL+ C + ++E+ + + Sbjct: 238 VAVISIPELTFEGLELMAATYRTFEIWLTVLGLYLLACLACSLAARRLETRLARR 292 >gi|229817433|ref|ZP_04447715.1| hypothetical protein BIFANG_02695 [Bifidobacterium angulatum DSM 20098] gi|229785222|gb|EEP21336.1| hypothetical protein BIFANG_02695 [Bifidobacterium angulatum DSM 20098] Length = 327 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 75/239 (31%), Positives = 126/239 (52%), Gaps = 31/239 (12%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++EW + F + + I TL + IS I++++ +A++R + ++ + FY Sbjct: 50 RFEWHIVWKYLFNENVLEGIKYTLLLTVISMAIAIVLAVLLAIMRKSI-NPVLRGVSWFY 108 Query: 62 VWIFRGTPLLVQLFVIFYGL-----PHIGI----------------VFDSFVAIIISLTL 100 +W FRGTP+ QL +F+GL P IGI V +F A + L L Sbjct: 109 IWFFRGTPVYTQL--VFWGLFAVLVPRIGIGIPFTSVEFWSIDSQSVITAFNAAWLGLAL 166 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N +AY++EI+R+ + ++ GQ +A+ A+G+ R +R IILPQ + P +EFI +L Sbjct: 167 NEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRTLIMRRIILPQAMRIIIPPTGNEFIGML 226 Query: 161 KSTSVASTITIPEIFQTAQRIVSTT-YQP---LIIYCELAFVYLILTSFCYIIQIKIES 215 K+TS+ + + Q A +ST Y+P LI+ C YL++TS +IQ ++E Sbjct: 227 KTTSLVNAVPFTLELQFATTAISTRLYKPIPLLIVAC---IWYLVITSILMVIQSRLEK 282 >gi|186471431|ref|YP_001862749.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184197740|gb|ACC75703.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 241 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 120/219 (54%), Gaps = 7/219 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IM 58 M Y+W L P+ AA + TL + ++F ++LI+G A + + ++ L + Sbjct: 3 MSYQWLTLW-GYVPEFFQAAWL-TLQVTLLAFCVALILGLLTA---LAGASHLVPLRVVS 57 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y+ + R TP+L+Q+F++F+GLP +G+ ++ A +I+L +N AY++E+ R+ I S+P Sbjct: 58 RGYIELIRNTPVLLQIFIVFFGLPSLGVNLSAYTAGVIALGVNVGAYMAEVFRAGIQSVP 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+ +GL R Q ++LPQ + + I +L TS+ S I +PE+ TA Sbjct: 118 RGQIEAAGILGLGRSQVFIEVVLPQAARAVYPAIVNNLIQLLLGTSLLSAIALPELTGTA 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 I + T + + YLIL++ + +I + V Sbjct: 178 TVINARTLLYIQTFSVTLIAYLILSNCLSWVAAQIGARV 216 >gi|212716471|ref|ZP_03324599.1| hypothetical protein BIFCAT_01395 [Bifidobacterium catenulatum DSM 16992] gi|212660724|gb|EEB21299.1| hypothetical protein BIFCAT_01395 [Bifidobacterium catenulatum DSM 16992] Length = 327 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 73/239 (30%), Positives = 127/239 (53%), Gaps = 31/239 (12%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++EW + F + + I TL + IS VI++I+ +AV+R + ++ + FY Sbjct: 50 RFEWNVVWKYLFNENVLEGIKYTLLLTVISMVIAIILAVILAVMRKSI-NPVLRGVSWFY 108 Query: 62 VWIFRGTPLLVQLFVIFYGL-----PHIGI----------------VFDSFVAIIISLTL 100 +W FRGTP+ QL +F+GL P IG+ V +F A + L L Sbjct: 109 IWFFRGTPVYTQL--VFWGLFAVLVPRIGVGIPFTSIEFWSIDSQSVITAFNAAWLGLAL 166 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N +AY++EI+R+ + ++ GQ +A+ A+G+ R +R ++LPQ + P +EFI +L Sbjct: 167 NEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRSMIMRRVVLPQAMRIIIPPTGNEFIGML 226 Query: 161 KSTSVASTITIPEIFQTAQRIVSTT-YQP---LIIYCELAFVYLILTSFCYIIQIKIES 215 K+TS+ + + Q A ++T Y+P LI+ C YL++TS ++Q ++E Sbjct: 227 KTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVAC---IWYLVITSILMVLQSRLEK 282 >gi|168490636|ref|ZP_02714779.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC0288-04] gi|183574959|gb|EDT95487.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC0288-04] Length = 521 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 54/152 (35%), Positives = 95/152 (62%), Gaps = 1/152 (0%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ I++ Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R Sbjct: 338 LVGWILNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVR 397 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I+++ KGQ++A+ A+G+T QT+ I+LPQ + +EF+ +K TSV + I++ Sbjct: 398 GGILAVDKGQFEAATALGMTHNQTMCKIVLPQVVRNILPATGNEFVINIKDTSVLNVISV 457 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E++ + + + TYQ + +A +Y +LT Sbjct: 458 VELYFSGNTVATQTYQYFQTFTIIAVIYFVLT 489 >gi|150396798|ref|YP_001327265.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150028313|gb|ABR60430.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 267 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 71/213 (33%), Positives = 120/213 (56%), Gaps = 19/213 (8%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 +VT +A + + L+IGFFIA+ + + + L + Y IFRG P L+ LF+++YGL Sbjct: 54 LVTASLAVATLPVGLVIGFFIALAKQS-EEKSLRLAANIYTTIFRGLPELLTLFIVYYGL 112 Query: 82 -----------PHIGIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 + G V ++FVA +I+L + FSAY SE++ S+ +IP GQ++A A+G Sbjct: 113 QILVQQFLATVGYDGAVEINAFVAGMIALGVVFSAYCSEVLLSAFKAIPHGQYEAGDALG 172 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT---AQRIVSTTY 186 L R +T+R IILPQ I + L + ++++LK T++ S I +P+I + A R+ + Sbjct: 173 LHRGKTMRLIILPQLIRVALPGLGNLWMALLKDTALVSVIGLPDILRQTGIAARVTKHAF 232 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + + C L +L+L I+ +E S + Sbjct: 233 EFFGVACVL---FLVLAMISSIVFSALERSTKR 262 >gi|33595380|ref|NP_883023.1| putative permease component of ABC transporter [Bordetella parapertussis 12822] gi|33565458|emb|CAE40091.1| putative permease component of ABC transporter [Bordetella parapertussis] Length = 216 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/189 (33%), Positives = 117/189 (61%), Gaps = 1/189 (0%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 S V+ +G +A+ R+ + + +YV IFRGTPLL+QL +I++GLPH GI + Sbjct: 26 SAVLGTALGLVLALFRLS-PVAPLRWLAFWYVSIFRGTPLLLQLLLIYFGLPHYGIELEP 84 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 I++L L +AY+SE RS I+ + +GQ +A+ ++G+ +++ IILPQ I +A Sbjct: 85 VPTAILALLLCSAAYLSENFRSGILGVDRGQIEAAQSLGMGAARSLFRIILPQAIRIAAP 144 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 + + +I+++K TS+ASTIT+ ++ + A++I S T++ + ++ +Y ++ IQ Sbjct: 145 TMGTRYIALMKDTSLASTITVVKLTKMAEQIGSNTFRYMEMFIIAGALYWVINQMLTFIQ 204 Query: 211 IKIESSVTQ 219 + +ES + + Sbjct: 205 VWVESKLGK 213 >gi|225868657|ref|YP_002744605.1| amino acid ABC transporter permease [Streptococcus equi subsp. zooepidemicus] gi|225870390|ref|YP_002746337.1| amino acid ABC transporter permease protein [Streptococcus equi subsp. equi 4047] gi|225699794|emb|CAW93605.1| putative amino acid ABC transporter permease protein [Streptococcus equi subsp. equi 4047] gi|225701933|emb|CAW99456.1| putative amino acid ABC transporter permease protein [Streptococcus equi subsp. zooepidemicus] Length = 213 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 58/172 (33%), Positives = 105/172 (61%), Gaps = 4/172 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRG 67 I+ P LL A++ TL + I V+S+ +G +A ++R+ F + ++ Y+W+ RG Sbjct: 4 IMQVLPSLLDGALI-TLQVFFIVIVLSIPLGALLAFLMRVDFKP--LQWLLTLYIWVMRG 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL +Y LP +G+ FD A I++ TLN++AY +EI R I +IP GQ++A+ Sbjct: 61 TPLLLQLIFFYYVLPSVGVTFDRMPAAILAFTLNYAAYFAEIFRGGIETIPNGQYEAAKV 120 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 + L+ QT+R++ILPQ + +E I+++K +S+ + + ++ ++ Sbjct: 121 LKLSPVQTVRYVILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASK 172 >gi|91778421|ref|YP_553629.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91691081|gb|ABE34279.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia xenovorans LB400] Length = 248 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 106/191 (55%), Gaps = 1/191 (0%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 + +L + VTL + +S V+ I+G A + + L+ YV + R TP +V Sbjct: 13 YAGMLARGVAVTLGLTAVSTVLGAIVGIAGASVAVAGPKWARWLVAG-YVELIRNTPFIV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF +F+GLP +GI D A I+++T+N AY EI+R+ I SI +GQ A+ A+GL Sbjct: 72 QLFFVFFGLPSLGIHIDEVQAAILAMTVNLGAYAIEIVRAGIDSISRGQVQAAQALGLHG 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +Q R+++LPQ I L S+ + ++ ++V S I++P++ A I S ++ Y Sbjct: 132 RQVFRYVVLPQAIANVFPALLSQVLIVMLGSAVVSQISVPDLTYAANFIQSRNFRSFESY 191 Query: 193 CELAFVYLILT 203 + YL+L+ Sbjct: 192 LIITATYLVLS 202 >gi|289651582|ref|ZP_06482925.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 215 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 108/184 (58%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ +F+ +IG + +R T + Y+ +F+GTPLL+QLF++F+G+ Sbjct: 19 TVALSLAAFIGGGLIGLLVMGMRTS-EKTGPRVTAKLYIELFQGTPLLMQLFLVFFGVAL 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ + A ++LTL SAY++EI R + SI KGQW+AS ++ +T + +R++ILPQ Sbjct: 78 MGMNISPWAAAALALTLFTSAYLAEIWRGCVESISKGQWEASASLAMTPFEQMRYVILPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T+V S I E+ +T + + T++P ++Y +A Y IL Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGSMLANATFEPFMVYGFVALGYFIL- 196 Query: 204 SFCY 207 CY Sbjct: 197 --CY 198 >gi|170724280|ref|YP_001751968.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169762283|gb|ACA75599.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 273 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 124/218 (56%), Gaps = 10/218 (4%) Query: 6 FNLIIDSFPQL---------LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 F++I++ FP L +TL + S V+S+++GF A+ R+ S + Sbjct: 48 FSIIVEKFPNLAGFKLGPNGFLQGAALTLFLCLCSMVVSVLLGFAAALARLSKSALLFG- 106 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + FY FRGTPLL+Q+ +I+ GLP +G+V + A II+L+LN+ AY+SEI R+ II Sbjct: 107 VASFYTSFFRGTPLLIQILLIYLGLPQVGLVPGAIAAGIIALSLNYGAYLSEIFRAGIIG 166 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + GQ A+ A+G+ HI LPQ + T P +++FIS+LK +S+ S + + E+ Sbjct: 167 VAVGQRHAALALGMRPVAIFWHITLPQAMRTIIPPSANQFISMLKDSSLISVMGVWEVMF 226 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 AQ ++Y+ L + A +Y +L+ + Q ++E Sbjct: 227 LAQSYGRSSYRYLEMLTTAAVIYWVLSILLELAQARLE 264 >gi|50121892|ref|YP_051059.1| ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49612418|emb|CAG75868.1| ABC transporter permease protein [Pectobacterium atrosepticum SCRI1043] Length = 225 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 65/219 (29%), Positives = 113/219 (51%), Gaps = 2/219 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y+W I + QLL + T+ I S +I ++ G +A +++ ++ L Sbjct: 1 MSYQWDFSAIWPYHQLLLEGLWGTIKIGATSILIGMLAGMVLAAMKMS-PRLLLRLPAVM 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 + +R TP +V F I+Y LP I + F F A +I+L+ A+ +E+ R +I SI Sbjct: 60 LIGFYRNTPAIVHFFWIYYALPVITPLTFSPFTAAVIALSAQSGAFYAEVYRGAISSIHP 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+ + A+G+ + +R +ILPQ + P ++KSTS+AS++ E+ A Sbjct: 120 GQWEGAKALGMPQSTALRRVILPQALRRMIPPFIERSFELIKSTSLASSLAYSELLYQAM 179 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 ++ S TY+PL +Y +A +Y L + IE ++ Sbjct: 180 QLNSQTYRPLEVYSLVAVMYFTLLLLISLFSQHIEKRLS 218 >gi|227548107|ref|ZP_03978156.1| ABC superfamily ATP binding cassette transporter [Corynebacterium lipophiloflavum DSM 44291] gi|227079833|gb|EEI17796.1| ABC superfamily ATP binding cassette transporter [Corynebacterium lipophiloflavum DSM 44291] Length = 309 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 122/216 (56%), Gaps = 27/216 (12%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A + TL I ++ + ++ G +AV+R+ + + + ++WIFRGTP+ VQL IF+ Sbjct: 61 AALHTLAITILAMLFGVVGGVLLAVMRMS-PNPVFKTVAWVFLWIFRGTPVYVQL--IFW 117 Query: 80 GLPHIGIVFD-----------------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 GL IG ++D +F+ ++ L LN +AY++EI+RS + S+P+GQ Sbjct: 118 GL--IGSIYDTFNLGVAEIPLEPFTSSAFLLAVVGLALNEAAYMAEIVRSGVSSVPEGQI 175 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP---EIFQTAQ 179 +AS A+G++ QT++ +LPQ + P +EFIS+LK++S+ + +P E++ + Sbjct: 176 EASKALGMSWSQTMKRTVLPQAMRIIIPPTGNEFISLLKTSSL--VVAVPYSLELYGRSM 233 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 I + ++P+ + A YL +TS + Q +E Sbjct: 234 DIAAALFEPVPMLLVAATWYLAITSILMVGQHYLEK 269 >gi|302524786|ref|ZP_07277128.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. AA4] gi|302433681|gb|EFL05497.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. AA4] Length = 297 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 67/232 (28%), Positives = 125/232 (53%), Gaps = 21/232 (9%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EW ++ F +++ ++ T+ +A I+ I++++G IA++R+ ++ + Y+W Sbjct: 41 EWGSVPDFVFYRVMALGLLNTVVLAVIAQAIAIVLGVLIALLRLS-ANPVAKWFAAAYIW 99 Query: 64 IFRGTPLLVQLFVIFYGL-----------PHIG--------IVFDSFVAIIISLTLNFSA 104 +FRG P+L+Q+ I+Y L P G ++ +F A ++ L LN SA Sbjct: 100 LFRGLPVLLQIL-IWYNLALIFPTVSIPLPFCGYLVHEPTNVLISAFTAALLGLALNESA 158 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 Y++EI+R+ + S+ GQ +A+ +IG+T T+R ++LPQ + P ++FI++LK TS Sbjct: 159 YMAEIVRAGLTSVDAGQTEAAKSIGMTPGATLRRVVLPQAMRVIIPPTGNDFINMLKGTS 218 Query: 165 VASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 +AS I + E+ A I S + A Y+++ + I Q +E S Sbjct: 219 MASVIGVTELIHAANNISSNNLLVMETLIAAAIWYMVVVTVAGIGQHYLERS 270 >gi|104773643|ref|YP_618623.1| glutamine ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422724|emb|CAI97351.1| Glutamine ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 222 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 125/218 (57%), Gaps = 14/218 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD---TIISLIMHFY 61 W NL + L VT+ ++ IS ++S +IG + +IR D T IS ++ Sbjct: 10 WINL------RFLLQGFWVTIEVSVISIILSFVIGLALGLIRFTRIDAKTTRISKVVGVI 63 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + I R PLL+ +F ++GLP +GI D+F A +I++ + SA I+E++RS I+++ GQ Sbjct: 64 IDIIRNLPLLLIIFFSYFGLPVMGIRVDAFQASVIAMVVFESAMIAEVVRSGIMAVDPGQ 123 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 + + + G+T Q + H++LPQ ++ L S+F+S++K TS+A+ I +PE+ A+ I Sbjct: 124 MEGARSNGMTYMQAMTHVVLPQALSKMIPALLSQFVSLIKDTSLATIIVLPELLYHAEII 183 Query: 182 VSTTYQPLI-IYCELAFVYLI----LTSFCYIIQIKIE 214 + +I +Y +A +Y I L+SF + +I+ Sbjct: 184 YNQNTNYMIPMYLAVAVMYFIICFALSSFANYLSKRIK 221 >gi|110668633|ref|YP_658444.1| ABC-type glutamine/glutamate/polar amino acids transport system, permease protein [Haloquadratum walsbyi DSM 16790] gi|109626380|emb|CAJ52839.1| ABC-type glutamine/glutamate/polar amino acids transport system, permease protein [Haloquadratum walsbyi DSM 16790] Length = 284 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 112/203 (55%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + LI PQ + A +V L I S V+S+ G F+ + R+ ++ I I YV F Sbjct: 62 YGLIPTILPQFIGAYGLV-LGIVVASSVLSVTAGIFVGLARVSKTN-ITRGISAAYVQFF 119 Query: 66 RGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLL Q+FVI++G+P + I I+SLTLN +AY+ E +R I ++P G Sbjct: 120 RGTPLLFQIFVIYFGIPTLWPGTFPIQGWGLPTAILSLTLNHAAYVGEAVRGGIGAVPDG 179 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++G+ Q +R +++PQ + + ++ I ++K TS+ + I IPE+ Q + Sbjct: 180 QMEAARSLGMGYVQAMREVVIPQAWRNALAAIGNDQIILVKDTSLLTVIAIPELIQQFRD 239 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S T+ P +A YL +T Sbjct: 240 VNSATFDPWTPLLLVAIAYLSIT 262 >gi|86360891|ref|YP_472778.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86284993|gb|ABC94051.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 219 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 116/204 (56%), Gaps = 11/204 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ +SFV ++G + +RI ++ +Y+ +F+GTPLL+QLF+ F+GL Sbjct: 20 TVLLSLVSFVGGGMVGLCLLFLRISRRKPP-RVLAKYYIELFQGTPLLMQLFIAFFGLGL 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 GI +++A ++L L +A+++EI R + ++ KGQW+AS ++G+ R Q +R++ILPQ Sbjct: 79 FGIDVPAWLAAGLALILWSAAFLTEIWRGCVEAVAKGQWEASASLGMGRLQQMRYVILPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + I+K T++ S I E+ + + + T+QP +Y +A +Y L Sbjct: 139 ALRIAIPPTVGFSVQIIKGTALTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFAL- 197 Query: 204 SFCY-------IIQIKIESSVTQH 220 C+ I++ K+ + H Sbjct: 198 --CWPLSKSSQILERKLNVAHRNH 219 >gi|326315079|ref|YP_004232751.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] gi|323371915|gb|ADX44184.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 217 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 100/180 (55%), Gaps = 1/180 (0%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 TL ++ ++F + G + R+ + + Y+ +F+ TPLL+Q+F++F+G Sbjct: 20 ATLLLSLMAFALGGAAGLAVLFARVG-RHPGLQRVSRTYIQVFQNTPLLMQMFLVFFGAS 78 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 G + A I LTL SAY++E+ R + +IP+GQW+AS ++ + Q +RH++LP Sbjct: 79 MAGFDVSPWTAAAIGLTLYTSAYLAEVWRGCVQAIPRGQWEASSSLAMGYFQQMRHVVLP 138 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + + P + I+K T+VAS I ++ + + + T+QP +IY +A Y +L Sbjct: 139 QAVRLAIAPTVGFSVQIVKGTAVASIIGFEDLTKLGSMLANATFQPFLIYGLVAAGYFLL 198 >gi|238027408|ref|YP_002911639.1| Polar amino acid ABC transporter inner membrane subunit [Burkholderia glumae BGR1] gi|237876602|gb|ACR28935.1| Polar amino acid ABC transporter, inner membrane subunit [Burkholderia glumae BGR1] Length = 248 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 101/169 (59%), Gaps = 9/169 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIR 111 Y+ +FRG+PLL+Q+F+++YGL G++ +SF V ++SL L + Y +EIIR Sbjct: 58 YILVFRGSPLLIQMFLVYYGLGQFGVIRESFLWPVLREPYVCAVLSLALCTAGYTAEIIR 117 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++++P GQ +A AIGL+ +R +I P + S+E + ++KST++AS +T+ Sbjct: 118 GGLMAVPVGQIEAGQAIGLSGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTV 177 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E+ AQ+I+ TY+ ++ A +YL L F + +E+ +++H Sbjct: 178 WEVTGVAQQIIQQTYRTTEVFACAALIYLFLNFFVVRVLGCVEARLSRH 226 >gi|163800524|ref|ZP_02194425.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4] gi|159175967|gb|EDP60761.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4] Length = 265 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 67/188 (35%), Positives = 119/188 (63%), Gaps = 4/188 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + ++VTL I+ IS + +L IG A++R+ S + + I YV + R TPLLVQ+++ Sbjct: 60 LISGLMVTLKISAISLIFTLAIGLVTALLRLSHSK-VGNAIGVTYVEVIRNTPLLVQIYL 118 Query: 77 IFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +++ P IG+ D F + +++L+L AY +EI R+ + SI KGQ++A+ ++GL+ Sbjct: 119 LYFVFGPVIGL--DRFSSAVLALSLFQGAYTAEIFRAGLSSIAKGQFEAAKSLGLSPFFA 176 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 + +ILPQ + + PL++E +S++K++S+ S + I ++ A+ IVS T P I+ + Sbjct: 177 YKDVILPQVLQRTLPPLTNEVVSLIKNSSIVSVMAIFDLTTEARNIVSETAMPFEIWFTV 236 Query: 196 AFVYLILT 203 A +YL LT Sbjct: 237 AAIYLALT 244 >gi|319943776|ref|ZP_08018057.1| glutamine/glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lautropia mirabilis ATCC 51599] gi|319743009|gb|EFV95415.1| glutamine/glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lautropia mirabilis ATCC 51599] Length = 220 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 85/130 (65%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + Y+ + R TPLL+QLF ++YGLP IGI +D F +I+LT +Y++E +R+ + + Sbjct: 52 LARVYIELSRNTPLLIQLFFLYYGLPKIGIHWDGFTCGVIALTFLGGSYMAEALRAGLQA 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ +++ AIGL R Q +RH++LPQ + + L++ + ++K TSV + +++ E+ Sbjct: 112 VPRGQVESARAIGLRRAQILRHVVLPQALAIALPALTANALFLVKETSVINAVSVAELLF 171 Query: 177 TAQRIVSTTY 186 + I+ T Y Sbjct: 172 VTKDIIGTDY 181 >gi|296102999|ref|YP_003613145.1| allantoate transport membrane protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057458|gb|ADF62196.1| allantoate transport membrane protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 221 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 109/198 (55%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ + +P LL A + VT+ + ++ + L IG F AVIR T S I YV I Sbjct: 7 FSELWPHWPALL-AGLWVTIQLTVMATLGGLAIGIFGAVIR-SGRATWFSRIWGGYVEII 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP +VQLF I +GLP++G+ + A ++++ +N AY +EI+R+ I PKGQW+A Sbjct: 65 RNTPFVVQLFFIVFGLPNMGLKMTAGEAALLAMVINLGAYSTEIVRAGIQVTPKGQWEAG 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GLTR QT ++LP + L S+ I ++ +SV S ++ E+ A I S T Sbjct: 125 RVLGLTRTQTFIRVVLPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFAANLIQSRT 184 Query: 186 YQPLIIYCELAFVYLILT 203 + +Y +YL L+ Sbjct: 185 FLSFEVYLVTTGIYLALS 202 >gi|78358782|ref|YP_390231.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78221187|gb|ABB40536.1| amino acid ABC transporter membrane protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 217 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 67/203 (33%), Positives = 120/203 (59%), Gaps = 5/203 (2%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFY 61 Y F+ I P L AA + TL + + ++ ++G + +RI SD I++L Y Sbjct: 2 YFEFSAIPKYLPYFLPAAWM-TLQVTTLGILLGFVLGLGTSFLRI--SDKKILNLPARAY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 +++ RGTPLL+QL I++GL + ++ + +++L ++ AYI+EI R +I SI GQ Sbjct: 59 IYLIRGTPLLLQLLFIYFGLRSLA-GLEAITSAVLALGIHNGAYIAEIFRGAISSISTGQ 117 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++G++ + + IILPQ + + PL ++FI LK +S+ASTITI E+ +Q++ Sbjct: 118 MEAARSLGMSYPRAMVRIILPQALKRAIPPLGNQFIIALKDSSLASTITINELLLKSQQL 177 Query: 182 VSTTYQPLIIYCELAFVYLILTS 204 S+ + + + A YL+ T+ Sbjct: 178 ASSNFMMMEMLAIAALFYLLYTA 200 >gi|209544208|ref|YP_002276437.1| polar amino acid ABC transporter inner membrane subunit [Gluconacetobacter diazotrophicus PAl 5] gi|209531885|gb|ACI51822.1| polar amino acid ABC transporter, inner membrane subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 499 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 64/175 (36%), Positives = 112/175 (64%), Gaps = 2/175 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL+ A V+TL ++ + V+++ +G +A++R + + +L YV I RGTPLL+ Sbjct: 287 LPLLLHGA-VLTLAVSACAMVVAVGLGLALALLRRYGPRWLGALAT-LYVEIVRGTPLLI 344 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 Q+ IFY LP IG+ FVA +++L +N++AY +E R+ + S+ +GQ +A+ A+ +T Sbjct: 345 QILFIFYALPGIGLRLSPFVAGVVALGMNYAAYEAENYRAGLQSVARGQVEAALALNMTH 404 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 Q +R +++PQ + ++++FIS+LK +S+ S IT+ E+ QT R+ ST Y Sbjct: 405 MQALRFVVVPQAVRMVIPVMTNDFISLLKDSSLVSVITLTELSQTYVRLSSTYYD 459 >gi|224367458|ref|YP_002601621.1| GlnP1 [Desulfobacterium autotrophicum HRM2] gi|223690174|gb|ACN13457.1| GlnP1 [Desulfobacterium autotrophicum HRM2] Length = 221 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 1/183 (0%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI 94 ++IG IR F S T + I Y +FRGTPL+VQLFV+++GLP+IGI F + A Sbjct: 34 GVVIGITAGAIRAFGSKTS-ARIGDGYAALFRGTPLVVQLFVLYFGLPNIGIYFSPYWAA 92 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 + L AY SE +R +++SI K Q+ A+ A+G TR QT+ +I+PQ + + + Sbjct: 93 VTGFILCSGAYQSEYVRGALLSIRKNQYLAAEALGFTRIQTLVWVIIPQAMRRALPGCGN 152 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 E + ++K +S+A +T E+ + I + ++ ++ + YL+L S II K E Sbjct: 153 EIVYLIKYSSLAYVVTFMELTGEGKTIATEYFRFTEVFLVIGCYYLVLVSLAKIILRKAE 212 Query: 215 SSV 217 ++ Sbjct: 213 QAL 215 >gi|119383470|ref|YP_914526.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119373237|gb|ABL68830.1| amino acid ABC transporter membrane protein 2, PAAT family [Paracoccus denitrificans PD1222] Length = 220 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 115/217 (52%), Gaps = 3/217 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EW I++ + L VT+ + + + +G IA+I+ + + I+ Y+ Sbjct: 2 EWS--ILEQYGPALLRGFGVTVLCWILGTIFGMALGLMIALIQ-RYGPRWLGWIIQAYIE 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTP LVQLFV++YG P IG+ D+ A ++ LT+ S Y +EI RS ++P GQ + Sbjct: 59 VIRGTPFLVQLFVLYYGGPLIGLRLDALPAGLLGLTIYGSPYFAEIFRSGFRAVPHGQIE 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ AIG+ +R ++LP + +S L + I + K T + S IT+PE+ R+ + Sbjct: 119 AARAIGMAEPTIVRRVLLPLGLVSSLPALVNFSIILTKETVILSIITVPELMYQVSRMST 178 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T++ L LA + L + ++E+ +T+H Sbjct: 179 ETFRYLEANLVLALFFWALVETISRVGRRLETRITKH 215 >gi|291087041|ref|ZP_06345220.2| amino acid ABC transporter, permease/substrate-binding protein [Clostridium sp. M62/1] gi|291076279|gb|EFE13643.1| amino acid ABC transporter, permease/substrate-binding protein [Clostridium sp. M62/1] Length = 227 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 117/202 (57%), Gaps = 12/202 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----ISLIMHFYVWIFR 66 D + L + VTL ++ + ++ ++GF +A++R+ + ++ + YV I R Sbjct: 10 DRYWMLFMQGLGVTLLLSLVIVIVGTLLGFLLAMLRLSNWKIVKIRPLNTLAGIYVEIVR 69 Query: 67 GTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 GTP+L+QL+ ++ LP + V ++L LN +AY+SE+IRS I ++ KGQ +A Sbjct: 70 GTPMLLQLYFFYFMLPMAFPSMNLSPIVCCAVALCLNSAAYVSEVIRSGIQAVDKGQMEA 129 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE---IFQTAQRI 181 + ++GL +Q + +ILPQ I L +EF+ ++K TS+AST + E ++QT + + Sbjct: 130 ARSLGLNHRQAMVKVILPQAIKNIMPALGNEFVMMIKDTSLASTFFVGELMTVWQTVRGV 189 Query: 182 VSTTYQPLIIYCELAFVYLILT 203 + + +PLII + +Y I+T Sbjct: 190 LYLSLEPLII---VGCIYFIVT 208 >gi|168756599|ref|ZP_02781606.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|168767315|ref|ZP_02792322.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|189356223|gb|EDU74642.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|189363604|gb|EDU82023.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] Length = 219 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 67/220 (30%), Positives = 122/220 (55%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P L+ A + L I+ + L+IG R F I + + Sbjct: 1 MQFDW-SAIWPAIPLLIEGA-KMALWISVLGLAGGLVIGLLAGFARTF-GGWIANHVALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R +TIR++ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A YLI+T I ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMK 217 >gi|260222062|emb|CBA31251.1| Octopine transport system permease protein occM [Curvibacter putative symbiont of Hydra magnipapillata] Length = 231 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 91/143 (63%), Gaps = 9/143 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG---------IVFDSFVAIIISLTLNFS 103 ++ ++ FY FRGTPLLVQ+F+++YGL ++ D+F I+LTLN + Sbjct: 54 VVRRLVRFYGAAFRGTPLLVQMFLLYYGLSQFEWVRASVAWVVLEDAFYCGFIALTLNIA 113 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AY++E IR+ I++IP GQ +A+ A G+ +R I+LPQ + + L +E +S+LK+T Sbjct: 114 AYMAEDIRAGILAIPVGQTEAARAFGMPSGTLLRRIVLPQALRIATPALGNEVVSLLKAT 173 Query: 164 SVASTITIPEIFQTAQRIVSTTY 186 ++ STIT+ ++ A+R+ + +Y Sbjct: 174 ALVSTITVFDLTGVARRLSNESY 196 >gi|326382647|ref|ZP_08204338.1| abc transporter integral membrane subunit [Gordonia neofelifaecis NRRL B-59395] gi|326198766|gb|EGD55949.1| abc transporter integral membrane subunit [Gordonia neofelifaecis NRRL B-59395] Length = 313 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 69/236 (29%), Positives = 125/236 (52%), Gaps = 26/236 (11%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W F + + + + TL + ++ +I +++G +AV+R+ + ++S Y+ Sbjct: 51 YHWSTYGKYLFEERILSGVGYTLALTVLAMIIGVVLGVILAVMRMS-PNRVLSATAWVYL 109 Query: 63 WIFRGTPLLVQLFVIFYGLPH-------IGIVFDS---------------FVAIIISLTL 100 W+FRGTP+ VQL + +GL +GI F FV +I L L Sbjct: 110 WVFRGTPVYVQL--VLWGLVGSIYKTVSVGIPFGPTAFEIDIQQLSLEYVFVLAVIGLAL 167 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N +AY++EI+R+ I S+ +GQ +AS A+G++ QT+R +LPQ + P +E IS+L Sbjct: 168 NEAAYMAEIVRAGISSVGEGQMEASVALGMSWWQTMRRTVLPQAMRVIIPPTGNEVISML 227 Query: 161 KSTSVASTITIP-EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 K+TS+ + + E++ ++ I +QP+ + + YL++TS + Q +E Sbjct: 228 KTTSLVAAVPFSLELYGRSRDISGVNFQPIPMLLVASTWYLVVTSILMVGQHFVEK 283 >gi|242237676|ref|YP_002985857.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242129733|gb|ACS84035.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 223 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 65/219 (29%), Positives = 125/219 (57%), Gaps = 9/219 (4%) Query: 6 FNLIIDSFPQ-LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 F+ ++ FPQ L+Y L I ++F I ++G +A+IR +++ ++ Y+ + Sbjct: 5 FSYLLKVFPQVLMYLPTTALLAIVSMAFAI--VLGLILALIRES-RLLVVAKLVELYISL 61 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAI---IISLTLNFSAYISEIIRSSIISIPKGQ 121 FRG P LVQLF+I++GLP + + A+ II +L SAY++EI R+++ S+ GQ Sbjct: 62 FRGIPSLVQLFIIYFGLPQLFPALNGLSAMAAAIIGFSLKNSAYMAEIFRAALASVDFGQ 121 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A ++G++R Q R I+LPQ + + + FIS++K TSVA + + E+F + I Sbjct: 122 TEAGLSVGMSRVQIYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFAEGKMI 181 Query: 182 VSTTYQPLIIYCELAFVY-LILTSFCYIIQIKIESSVTQ 219 + + + + + +Y L++ ++ + Q ++E ++ Sbjct: 182 AAESLRFFETFLVVGLIYWLVIIAYSW-FQTRLEKKLSH 219 >gi|256396803|ref|YP_003118367.1| polar amino acid ABC transporter inner membrane subunit [Catenulispora acidiphila DSM 44928] gi|256363029|gb|ACU76526.1| polar amino acid ABC transporter, inner membrane subunit [Catenulispora acidiphila DSM 44928] Length = 333 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 120/221 (54%), Gaps = 20/221 (9%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF---- 75 A++VTL + + +I ++ G +AV+R+ S+ + S Y W FRGTP+LVQL Sbjct: 80 AVLVTLELTVYAMLIGIVGGVLLAVMRLS-SNPVSSSAAWAYTWFFRGTPVLVQLLFWNN 138 Query: 76 -------VIFYGLP------HIGI--VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + +G+P H+ F A +++L LN +AY+SEI+R+ I+S+ +G Sbjct: 139 IAALVGQEVGFGIPFGPEFFHLDTNSTITRFTAAVLALGLNEAAYMSEIVRAGILSVDEG 198 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++G+ R + +R I+LPQ + P +E IS+LK++S+AS I + E+ ++ Sbjct: 199 QSEAAASLGMRRAKIMRRIVLPQAMRVIIPPTGNETISMLKTSSLASVIGVVELTDASES 258 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + ++ + Y + YL T+ I Q IE + + Sbjct: 259 AIHLYFKAIPFYVVASLWYLFFTTVLSIGQYYIERRYARGS 299 >gi|228922903|ref|ZP_04086200.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836759|gb|EEM82103.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 225 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 121/215 (56%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I +S + I+G +A+ +I + ++ FY IF Sbjct: 11 FSAITPSIPYIL-KGLEVTLKIVAVSALAGFILGTLLALCKIVRIRAL-NIAADFYTSIF 68 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P I G +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 69 RGTPLVLQLMIIYFGVPQIIGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 128 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 129 AMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 188 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y +L ++ IE + + Sbjct: 189 TFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKK 223 >gi|86357909|ref|YP_469801.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86282011|gb|ABC91074.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 216 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 51/142 (35%), Positives = 94/142 (66%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ +F+GTPLL+QLFV++YG+ +G+ ++++A+ I+ TL+ SA++ EI R SI ++PKG Sbjct: 55 YIALFQGTPLLMQLFVVYYGVALLGVDVNAWIAVAIAFTLHASAFLGEIWRGSIEAVPKG 114 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+GL ++ ++LPQ + S + ++K TS+A+ + E+ + Q Sbjct: 115 QTEAANALGLHYISRMKDVVLPQALKISMPATIGFLVQLIKGTSLAAIVGFIELTRAGQI 174 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 I + TY+PL+++ + VY I+ Sbjct: 175 ISNQTYRPLLVFGIVGMVYFII 196 >gi|83592632|ref|YP_426384.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC 11170] gi|83575546|gb|ABC22097.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170] Length = 218 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 119/209 (56%), Gaps = 2/209 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F +I+ + P LL A T+ I+ + ++ +IG + V R+ + +I I YV F Sbjct: 3 FQVILANLPFLLKGA-GSTIAISLVGILLGQVIGALVCVGRLS-GNRLIDAIGALYVSFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG PLL+QL +I+Y LP IGI + +A I +L L AY+SEI R S+ +IP+GQ +A+ Sbjct: 61 RGVPLLIQLLLIYYMLPLIGIDVPALMAAIGALGLASGAYVSEIYRGSLNAIPRGQGEAA 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G + R I+LPQ S L +E I +LK++S+ S I + E+ + +Q + ++T Sbjct: 121 LALGFSGGSIWRRILLPQAFRLSVPALVNELILLLKASSLISVIGVAELTRVSQTVSAST 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Y+ L IY +Y ++ I+ +E Sbjct: 181 YRALEIYMAAGVIYFLINGCLAILGALVE 209 >gi|300933297|ref|ZP_07148553.1| putative ABC transport system, permease protein [Corynebacterium resistens DSM 45100] Length = 310 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/215 (32%), Positives = 121/215 (56%), Gaps = 27/215 (12%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A + T+ + S +I +I+G +AV+R+ + ++ + Y+WIFRGTP+ VQL +F+ Sbjct: 65 AALRTIALTVFSMLIGVILGAIVAVLRMS-PNPVLQAVAWLYLWIFRGTPIYVQL--VFW 121 Query: 80 GLPHIGIVFDS-----------------FVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 GL +G ++ S F+ ++ L LN +AY++EI+R+ I ++P+GQ Sbjct: 122 GL--LGSIYQSVSVGFAEIDLQAFLSNMFLLAVVGLALNEAAYMAEIVRAGIQAVPEGQS 179 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP---EIFQTAQ 179 +AS A+G+T Q +R +LPQ + P +EFIS+LK+TS+ I IP E++ Sbjct: 180 EASKALGMTWWQNMRRTVLPQAMRIIIPPTGNEFISLLKTTSL--VIAIPYAGELYGRTT 237 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I + + P+ + A YL++TS + Q +E Sbjct: 238 DISNNLFLPVPLLLVAATWYLVITSLLMVAQHYLE 272 >gi|293376247|ref|ZP_06622490.1| ABC transporter, permease protein [Turicibacter sanguinis PC909] gi|325845168|ref|ZP_08168477.1| ABC transporter, permease protein [Turicibacter sp. HGF1] gi|292645139|gb|EFF63206.1| ABC transporter, permease protein [Turicibacter sanguinis PC909] gi|325488833|gb|EGC91233.1| ABC transporter, permease protein [Turicibacter sp. HGF1] Length = 253 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/215 (32%), Positives = 125/215 (58%), Gaps = 23/215 (10%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTIISLIM 58 F+L + +F +Y I +TL +A + ++ L+IG + +R S ++ +M Sbjct: 15 FSLFVKNFDLFMYG-IKMTLILAFLGTMLGLVIGLVLGGLRAITIEPRDLKSVKVLKKMM 73 Query: 59 H----FYVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 H YVW FRGTP++VQ +++ L P +G + S A I+ +++N AY++EIIRS Sbjct: 74 HCLIGLYVWFFRGTPMMVQAMFLYHALRPILG--WSSLTAGIVIISVNTGAYMAEIIRSG 131 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I S+ KGQ +A+ +IG+T Q++ +IILPQ I + + +EFI +K +S+ + I + E Sbjct: 132 IQSVDKGQLEAARSIGMTAFQSMMYIILPQAIKNAFPSIGNEFIVNIKDSSMLNVIGVIE 191 Query: 174 IFQTAQRIVSTTYQPLIIYCELAF----VYLILTS 204 +F ++ + + +++Y E F +YL+LT+ Sbjct: 192 VFFQSKSVAGS----VMLYSETFFITCLIYLVLTT 222 >gi|199599085|ref|ZP_03212491.1| ABC-type amino acid transport system, permease component [Lactobacillus rhamnosus HN001] gi|229553195|ref|ZP_04441920.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|258509001|ref|YP_003171752.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG] gi|258540195|ref|YP_003174694.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc 705] gi|199590048|gb|EDY98148.1| ABC-type amino acid transport system, permease component [Lactobacillus rhamnosus HN001] gi|229313491|gb|EEN79464.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|257148928|emb|CAR87901.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus GG] gi|257151871|emb|CAR90843.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus Lc 705] gi|259650294|dbj|BAI42456.1| amino acid ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 220 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W NL + L + VTL ++ S S ++G + + R + S + F + Sbjct: 8 YSWINL------RYLLQGLGVTLEVSIASIFFSFVLGVILGLAR-YVKIKYFSAAVGFVI 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + R PLL+ LF ++ LP IGI + VA I+++++ SA ++EI+RS I ++P+GQ Sbjct: 61 DVIRNLPLLLILFFTYFALPDIGIRLNVIVAAIVAMSIFESAMLAEIVRSGINAVPRGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ + GLT Q +R+II+PQ + P+ S+FIS++K TS+A+ I +PE AQ I Sbjct: 121 EAARSNGLTFYQAMRYIIMPQALKKMIPPIVSQFISLVKDTSLATIILLPEATYHAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLILT 203 +I ++ LA +Y ++ Sbjct: 181 GQNINYMIPMFVALAVMYFVVN 202 >gi|260903453|ref|ZP_05911848.1| octopine transport system permease protein OccM [Vibrio parahaemolyticus AQ4037] gi|308110365|gb|EFO47905.1| octopine transport system permease protein OccM [Vibrio parahaemolyticus AQ4037] Length = 225 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 117/203 (57%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LII+SFP + + + T+ + IS VI L + +A+ R ++ ++SL +++ F Sbjct: 3 FSLIIESFP-VYFQGLWTTVWLVGISLVIGLCVSVPLAIARNS-TNYVLSLPSWGFIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQFFPVKDTLWEHAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G+++ T + IILP + + S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMSKFMTYKRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIVDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFESFLTAGLFYMSLT 203 >gi|260430204|ref|ZP_05784178.1| ABC transporter permease protein [Citreicella sp. SE45] gi|260418676|gb|EEX11932.1| ABC transporter permease protein [Citreicella sp. SE45] Length = 221 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 117/206 (56%), Gaps = 8/206 (3%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD--TIISLI 57 M Y W F +++ F +L ++ T+ IA +S V+ +++G +A++R+ I SL+ Sbjct: 1 MDYSWDFGPVLERF-DMLALGLLNTVKIAAVSIVLGVLVGLVLAMMRLSTRRWLNIPSLV 59 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ +R TP +V F FY LP + + D +VA +++L+ A+ +E+ R I+S Sbjct: 60 ---FIEFYRNTPPIVHFFWFFYALPVMLAVSLDPYVAAVLALSTQSGAFYAEVFRGGIVS 116 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQW+ A+G+T +R +I+PQ I P +LK+T++AST+ ++ Sbjct: 117 IERGQWEGGRALGMTHSALMRRVIVPQAIARMVPPFIERSFELLKTTALASTLAYADLLY 176 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLIL 202 A + + T++PL +Y +A +YL+L Sbjct: 177 QAMMVNAETFRPLEVYTTIALMYLVL 202 >gi|190015056|ref|YP_001966754.1| amino acid ABC transporter, permease protein [Bacillus cereus] gi|190015322|ref|YP_001967078.1| amino acid ABC transporter, permease protein [Bacillus cereus] gi|116584732|gb|ABK00847.1| amino acid ABC transporter, permease protein [Bacillus cereus] gi|116585003|gb|ABK01112.1| amino acid ABC transporter, permease protein [Bacillus cereus] Length = 201 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/181 (32%), Positives = 108/181 (59%), Gaps = 11/181 (6%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI--- 86 I+ V+S+ +GF + + + + +S + Y+++ RGTPLL+QL I +GLP + + Sbjct: 8 IAIVVSIPMGFLLT-LAVRSNLKPLSWLAQGYIYVLRGTPLLLQLLFICFGLPLLPVIGE 66 Query: 87 --VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQT 144 V D FVA + LN++AY +EI R +++I KGQ++AS +GL++ QT+R +ILPQ Sbjct: 67 YLVMDRFVAACLGFILNYAAYFAEIFRGGLLAIDKGQYEASQVLGLSKWQTMRRVILPQM 126 Query: 145 ITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY--QPLIIYCELAFVYLIL 202 + +++E ++++K T++ + +PE+ AQ V+ + P + +YLI+ Sbjct: 127 FRIALPAVANESVTLIKDTALLYAVAVPELLHFAQTAVNRDFTITPFFVA---GLIYLIM 183 Query: 203 T 203 T Sbjct: 184 T 184 >gi|56420513|ref|YP_147831.1| glutamine ABC transporter permease [Geobacillus kaustophilus HTA426] gi|261420186|ref|YP_003253868.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. Y412MC61] gi|297529845|ref|YP_003671120.1| polar amino acid ABC transporter inner membrane protein [Geobacillus sp. C56-T3] gi|319766998|ref|YP_004132499.1| polar amino acid ABC transporter inner membrane protein [Geobacillus sp. Y412MC52] gi|56380355|dbj|BAD76263.1| glutamine ABC transporter (permease) [Geobacillus kaustophilus HTA426] gi|261376643|gb|ACX79386.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y412MC61] gi|297253097|gb|ADI26543.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. C56-T3] gi|317111864|gb|ADU94356.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y412MC52] Length = 217 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 65/180 (36%), Positives = 106/180 (58%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + ++ + SL +G IA+ RI ++ + YV R PL++ +FV F GLP Sbjct: 21 TIKASVLALIGSLALGTIIAIFRIA-PIRPLNWVGTAYVEFIRNIPLVLIVFVFFMGLPA 79 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +GI FDSF A + L + +A+I+E IRS I ++PKGQ +A+ + GLT Q +R++ILPQ Sbjct: 80 VGIRFDSFTAGTLGLMVYTAAFIAEAIRSGIQAVPKGQMEAARSSGLTYLQAMRYVILPQ 139 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + PL ++FI+++K++SV I ++ I S T+ +Y +A YL+LT Sbjct: 140 AVKIVIPPLGNQFINLVKNSSVLGVIAGLDLMYYGDLISSKTFVTFDVYIFVALFYLVLT 199 >gi|15614025|ref|NP_242328.1| ABC transporter (permease) [Bacillus halodurans C-125] gi|10174079|dbj|BAB05181.1| ABC transporter (permease) [Bacillus halodurans C-125] Length = 218 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 20/200 (10%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTIISLIMHFYV 62 I F + + VTL +S + L++G +A+ +I +F+D FY Sbjct: 8 IQPFMPFMLEGVWVTLQFVSVSLLFGLVLGIVLAIFKISKYRLFRWFAD--------FYT 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 IFRGTPL++QL +I+ LP G+ F A ++ LN +AY+SEIIR+ I ++ KGQ Sbjct: 60 SIFRGTPLILQLLMIYLALPQFGVDISQFQAAFLAFGLNSAAYVSEIIRAGIQAVDKGQR 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A+G+ + + IILPQ + L +EFI++ K +++ S I + ++ + AQ Sbjct: 120 EAAEALGIPYRPMMLRIILPQAMRNILPALFNEFINLTKESAIVSVIGVTDLMRRAQITS 179 Query: 183 STTYQPLIIYCE-LAFVYLI 201 + TY +Y E L FV LI Sbjct: 180 AETY----LYLEPLLFVGLI 195 >gi|291007840|ref|ZP_06565813.1| amino acid ABC transporter, permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 230 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 113/206 (54%), Gaps = 9/206 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLI 57 +K++W + + FP LL A+ + A + ++++L++G IA++R + + + L+ Sbjct: 11 VKWDW-DYAAEIFPMLL-GALWTAIQAAVLGYLLALVLGLVIALLRRSRVLWISVPVGLV 68 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + F R TPL+VQLF +F+ LP +GI + ++ L L+++ Y++E+ R+ I + Sbjct: 69 VEF----VRSTPLIVQLFFLFFVLPEVGIQMSPLLTGVVGLGLHYATYVAEVYRAGIDGV 124 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQW+A+ A+ L ++ +ILPQ I S L + I++ K IT+ E F Sbjct: 125 PAGQWEAATALNLPTRRVWTDVILPQAIPRSIPALGNYLIALFKDVPQLVAITVLEPFTV 184 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + T++P +YL +T Sbjct: 185 AREVTADTFRPFEAITLAGLLYLAVT 210 >gi|239947119|ref|ZP_04698872.1| glutamine ABC transporter, permease/substrate-binding protein [Rickettsia endosymbiont of Ixodes scapularis] gi|239921395|gb|EER21419.1| glutamine ABC transporter, permease/substrate-binding protein [Rickettsia endosymbiont of Ixodes scapularis] Length = 218 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 121/207 (58%), Gaps = 7/207 (3%) Query: 5 WFNLIIDSFPQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 F + +P++L+ +VTL + I+ + L+IG +A+ ++ + + +FY Sbjct: 1 MFEYLTKFYPKILFIVEGTLVTLKYSVIAVIFGLVIGMLLAICKVN-KNRALRFFANFYT 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 IFRGTPLL+QL +I++ P+I +V F F A IS +LN AY+SE+IR+ I ++ KGQ Sbjct: 60 SIFRGTPLLIQLSIIYFASPYIIVVKFSVFTAGAISFSLNSGAYVSEVIRAGINAVDKGQ 119 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++A+ A+ + + ++ IILPQ + L +E ++++K +++ S + ++ + AQ + Sbjct: 120 FEAAEALAIPKFLIMKDIILPQAVKNIFPSLVNELVNLIKESAIISMLGEMDLMRRAQIV 179 Query: 182 VSTTYQ---PLIIYCELAFVYLILTSF 205 TY P++I ++ ++L SF Sbjct: 180 SIETYNYFFPMLIAACCYYILVMLISF 206 >gi|306846379|ref|ZP_07478926.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] gi|306273164|gb|EFM55064.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] Length = 323 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/172 (34%), Positives = 102/172 (59%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEI 109 + +I + FY +FRG PLL+Q+++I+ GLP IG V + A I++L+L + AY++EI Sbjct: 150 QNGVIYGLSTFYTSLFRGLPLLMQIYIIYLGLPQIGYVIGAIPAGILALSLCYGAYMTEI 209 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R+ I SIP GQ +A+ A+GL QT+ +ILPQ + P ++FI++LK +S+ S I Sbjct: 210 FRAGIESIPHGQKEAATALGLGSAQTMWLVILPQAMRIIIPPTGNQFIAMLKDSSLVSVI 269 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + E+ A+ T ++ + + + +Y IL+ IQ +IE ++ Sbjct: 270 GVWELMYVARTQGQTEFRHIEMLITASMIYWILSISFEFIQSRIERYYARYN 321 >gi|226310806|ref|YP_002770700.1| glutamine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226093754|dbj|BAH42196.1| glutamine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 216 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 113/201 (56%), Gaps = 2/201 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +VTL +A +S V S I + V+R + +S ++ V + R PLL+ +F Sbjct: 15 LLEGFLVTLQVAFLSIVFSFTIAIIVGVLR-YAKIPGVSQVLGTIVELIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP +GI D F A +++L + +A +SEI+RS + S+ KGQ +A+ + GL QT+ Sbjct: 74 TYFALPEVGIKLDKFWAAVLALVIFEAAMLSEIVRSGLTSVEKGQIEAARSSGLNYVQTL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI-IYCEL 195 H++LPQ + P+ S+FIS+LK TS+A I +PE+ AQ I +I + + Sbjct: 134 WHVVLPQALRRMVPPIVSQFISLLKDTSLAVVIALPELMNHAQIINGRNVNYVIPTFLMV 193 Query: 196 AFVYLILTSFCYIIQIKIESS 216 A +Y ++ ++ ++E+ Sbjct: 194 AVMYFVVNYALSVVSKRLENK 214 >gi|330819484|ref|YP_004348346.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia gladioli BSR3] gi|327371479|gb|AEA62834.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia gladioli BSR3] Length = 222 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 66/157 (42%), Positives = 107/157 (68%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ FRGTPLLVQLF++F+GLP GI+ +FV ++ L L +AY+SEI+R +I S+ +G Sbjct: 59 YLIFFRGTPLLVQLFLLFFGLPQFGILLPAFVCGVLGLGLYSAAYVSEIVRGAIQSVDRG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ +IG++ Q +R IILPQ I PL +EFI+++K++++ S +TI ++ Q+ Sbjct: 119 QMEAARSIGMSSGQAMRAIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIDDLMHEGQK 178 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 I+S +Y+ L +Y +A VYL+LT I ++E + Sbjct: 179 IISVSYRSLEVYIVIALVYLVLTQTTNFILHRVERRL 215 >gi|229492701|ref|ZP_04386502.1| ABC-type amino acid transport system, permease component [Rhodococcus erythropolis SK121] gi|229320360|gb|EEN86180.1| ABC-type amino acid transport system, permease component [Rhodococcus erythropolis SK121] Length = 318 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 123/223 (55%), Gaps = 24/223 (10%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A VT+ + +S ++++G +AV+R+ + ++ Y+W+FRGTP+ VQL +F+ Sbjct: 65 AAWVTIQLTILSMAAAIVLGIVLAVMRLS-PNPVLKSAAWVYLWVFRGTPVYVQL--VFW 121 Query: 80 GL-PHI------GIVF-------------DSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 GL P I G+ F +F+ +I L LN +AY++EI+R+ I S+ + Sbjct: 122 GLFPSIYKSIDLGVPFVHQFVHFDMQDLQAAFLFAVIGLALNEAAYMAEIVRAGIASVNE 181 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP-EIFQTA 178 GQ +AS A+G+T QT+R +LPQ + P +E IS+LK+TS+ + + + E++ A Sbjct: 182 GQTEASVALGMTWGQTMRRTVLPQAMRVIIPPTGNELISLLKTTSLVTAVPLSTELYGRA 241 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + I ++P+ + YL +TS + Q +E ++ + Sbjct: 242 RDISGANFEPIPLLMVAVTWYLAMTSVLMVGQYYVERHYSKGS 284 >gi|251795092|ref|YP_003009823.1| polar amino acid ABC transporter inner membrane protein [Paenibacillus sp. JDR-2] gi|247542718|gb|ACS99736.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. JDR-2] Length = 223 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 115/202 (56%), Gaps = 5/202 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 + Y W ++ + + I TL ++ ++ + L++G ++++R+ ++ I Sbjct: 3 LAYHWDFSFLNDYGSYYWTGIKKTLEVSLLAVLSGLVLGTLVSLLRLSGL-WLLRFIGTV 61 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV I RGTPLLVQLF+ +YGLP +G F A ++LT+N AYI+EI+R+ I ++ K Sbjct: 62 YVEIVRGTPLLVQLFLFYYGLPIFLGFDIGIFTAAYLTLTVNSGAYIAEIMRAGIQAVDK 121 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ ++G+++ +R IILPQ L +EF+ ++K +SV S + E+ A Sbjct: 122 GQMEAARSLGMSKGLAMRQIILPQAFKNVLPALGNEFVVVVKESSVLSVVGYAELTYQAN 181 Query: 180 RIVSTTY---QPLIIYCELAFV 198 I T+ +P+++ + FV Sbjct: 182 AIRGATFISIEPMLVSALIYFV 203 >gi|150017368|ref|YP_001309622.1| polar amino acid ABC transporter inner membrane subunit [Clostridium beijerinckii NCIMB 8052] gi|149903833|gb|ABR34666.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium beijerinckii NCIMB 8052] Length = 221 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 62/202 (30%), Positives = 112/202 (55%), Gaps = 3/202 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W N ++ + P L A +TL +A + ++SL+IG +I ++F ++ I+ Sbjct: 1 MNIDW-NFVVTNLP-LYEKAAWLTLKLAIVGILLSLVIGLLCGII-LYFKVRVLDKIVQA 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLLVQ+F +++GLP +G II L +Y++E RS + ++ K Sbjct: 58 YIELSRNTPLLVQIFFLYFGLPKLGFKMGEATCAIIGLAFLGGSYMAEAFRSGVEAVSKT 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q ++ +IGL++ Q IR++I+PQ + S +S+ I +LK TSV I+I ++ + Sbjct: 118 QIESGISIGLSKGQLIRYVIIPQAFSVSMPSISANCIFLLKETSVLGAISIMDLTNLTKD 177 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 ++ Y+ L +YLI+ Sbjct: 178 LIGMYYRTFESLSLLVLIYLIM 199 >gi|186473936|ref|YP_001861278.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184196268|gb|ACC74232.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 567 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 56/154 (36%), Positives = 94/154 (61%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+W RGTP L+QL IF LP IG+ FD +I LN +A+ +E+ R+ I+S+ + Sbjct: 94 YIWFVRGTPQLLQLVFIFDALPLIGLRFDEVTTAVIGFALNEAAFSAELFRAGILSVNRS 153 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q A+ A+G+ T+R I+LPQ++ L+++ I +LK TS+AS I + E+ +Q+ Sbjct: 154 QSTAAAALGMGPLLTLRRIVLPQSMRAVIPGLANDTIGMLKLTSIASVIFVNELTFRSQQ 213 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 +V ++ ++ A +YLILTS ++Q+ +E Sbjct: 214 VVGQNFKFFTVFGAAAVIYLILTSGVSLLQVWLE 247 >gi|237650335|ref|ZP_04524587.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CCRI 1974] gi|237822023|ref|ZP_04597868.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CCRI 1974M2] gi|332202359|gb|EGJ16428.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA41317] Length = 521 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 53/152 (34%), Positives = 95/152 (62%), Gaps = 1/152 (0%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ +++ Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R Sbjct: 338 LVGWVLNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVR 397 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I+++ KGQ++A+ A+G+T QT+ I+LPQ + +EF+ +K TSV + I++ Sbjct: 398 GGILAVDKGQFEAATALGMTHNQTMCKIVLPQVVRNILPATGNEFVINIKDTSVLNVISV 457 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E++ + + + TYQ + +A +Y +LT Sbjct: 458 VELYFSGNTVATQTYQYFQTFTIIAVIYFVLT 489 >gi|256375908|ref|YP_003099568.1| polar amino acid ABC transporter, inner membrane subunit [Actinosynnema mirum DSM 43827] gi|255920211|gb|ACU35722.1| polar amino acid ABC transporter, inner membrane subunit [Actinosynnema mirum DSM 43827] Length = 283 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 117/219 (53%), Gaps = 22/219 (10%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 +++ + T+ +A ++ ++++G IA++R ++ + YVW+FRG P+L+Q+ Sbjct: 63 EIMLRGLANTVVLAVVAQAGAIVLGVGIALLR-RSANPVARWFAAGYVWLFRGLPVLLQI 121 Query: 75 FVIFYGLPHIGIVFD-----------------SFVAIIISLTLNFSAYISEIIRSSIISI 117 + F ++ +VFD +FVA ++ L LN SAY++EI+R+ + S+ Sbjct: 122 LLWF----NLALVFDTISIPMVLEVRTNMLITAFVAALLGLGLNESAYMAEIVRAGLNSV 177 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQ +A+ AIG+T T+R ++LPQ + P + FI++LK TS+AS I E+ Sbjct: 178 DHGQVEAAKAIGMTPATTLRRVVLPQAMRVIIPPTGNNFINMLKGTSMASVIGFLELIHA 237 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 A I S Q + A Y+++ S + Q +E + Sbjct: 238 ANNIASHNLQIMETLLAAAAWYMVVVSAASVGQHFLERA 276 >gi|194397297|ref|YP_002037131.1| amino acid ABC transporter amino acid-binding protein/permease [Streptococcus pneumoniae G54] gi|194356964|gb|ACF55412.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae G54] Length = 521 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 53/152 (34%), Positives = 95/152 (62%), Gaps = 1/152 (0%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ +++ Y+ IFRGTP++VQ VI+YG GI D +A I +++N AY++EI+R Sbjct: 338 LVGWVLNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVR 397 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I+++ KGQ++A+ A+G+T QT+ I+LPQ + +EF+ +K TSV + I++ Sbjct: 398 GGILAVDKGQFEAATALGMTHNQTMCKIVLPQVVRNILPATGNEFVINIKDTSVLNVISV 457 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E++ + + + TYQ + +A +Y +LT Sbjct: 458 VELYFSGNTVATQTYQYFQTFTIIAVIYFVLT 489 >gi|91225246|ref|ZP_01260414.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] gi|91189885|gb|EAS76157.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] Length = 225 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 115/203 (56%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LII+SFP L + T+ + ++ VI L + +AV R ++ +SL +++ F Sbjct: 3 FSLIIESFPTYL-QGLWTTVWLVGLALVIGLCVSIPLAVARNS-TNYALSLPSWGFIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQFFPVKDTLWENAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G+++ T R IILP + + S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMSKFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFESFLTAGLFYMALT 203 >gi|89893486|ref|YP_516973.1| hypothetical protein DSY0740 [Desulfitobacterium hafniense Y51] gi|89332934|dbj|BAE82529.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 218 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 122/217 (56%), Gaps = 3/217 (1%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W + I FP++ +AA+ +T+ F ++L +G F+ I S ++ +V Sbjct: 2 WNW-DFAIKIFPEI-FAALKITVTATFAGFFLALFLGMFL-TIGSRSSLKPVAYGSKGFV 58 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 R TPLLVQL+ IFY LP G+ A I+ L +++S Y+SE+ RS I +IP+GQW Sbjct: 59 EFIRSTPLLVQLYFIFYVLPQAGLSLSPLTAGIMGLGIHYSTYLSEVYRSGIEAIPQGQW 118 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A+ + Q II+PQ + + + I++ K T + S IT+ EI QTA+ I Sbjct: 119 EAAKALNFSPWQVWAKIIIPQAVPPVIPVMGNYLITMFKETPLLSAITLVEILQTAKIIG 178 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S +++ L + + ++L+L+ C ++ ++E +T+ Sbjct: 179 SHSFRYLEGFTIVGLLFLLLSYPCSVMIRRLEMRMTK 215 >gi|307132981|ref|YP_003884997.1| amino acid ABC transporter permease [Dickeya dadantii 3937] gi|306530510|gb|ADN00441.1| Amino acid ABC transporter, permease protein [Dickeya dadantii 3937] Length = 223 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 124/217 (57%), Gaps = 11/217 (5%) Query: 9 IIDSFPQ-LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 ++ FPQ L+Y + TL +A +S + ++++G +A++R +++ ++ Y+ +FRG Sbjct: 8 LLKVFPQVLMY--LPTTLLLAVVSMLFAIVLGLVLALVRES-RFVVVAKLVELYISLFRG 64 Query: 68 TPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 P LVQLF+I++GLP + G+ + A II +L SAY++EI R+++ S+ GQ Sbjct: 65 IPSLVQLFIIYFGLPQLFPSLNGL--SAMTAAIIGFSLKNSAYMAEIFRAALASVDFGQT 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A ++G+ + Q R I+LPQ + + + FIS++K TSVA + + E+F + I Sbjct: 123 EAGLSVGMNKAQIYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFAEGKMIA 182 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + + + + + +Y +L +Q ++E ++ Sbjct: 183 AESLRFFETFLVVGLIYWMLIVVYSWLQSQLEKKLSH 219 >gi|254173251|ref|ZP_04879924.1| glutamine-binding periplasmic protein of glutamine ABC transporter [Thermococcus sp. AM4] gi|214032660|gb|EEB73489.1| glutamine-binding periplasmic protein of glutamine ABC transporter [Thermococcus sp. AM4] Length = 229 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 63/180 (35%), Positives = 105/180 (58%), Gaps = 2/180 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ +S + L+IG +A++ + T+ + M Y RG PLL FVIFY +P Sbjct: 23 TIILSVLSIALGLLIGLPVALMETYGGKTLRRIAM-VYEGTLRGIPLLAIYFVIFYSMPM 81 Query: 84 -IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 IG+ F+A ++ L + SAY S+I RS I ++ +GQ +A+ ++G+++ Q IRHI+LP Sbjct: 82 LIGLGLSPFLAAVVGLGIRSSAYQSQIFRSGIQAVDEGQIEAAVSLGMSQWQIIRHIVLP 141 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + S +E++ +LK TS+A + I E+ + A +VS T +P Y A YL + Sbjct: 142 QALRMSIPAWMNEYVIVLKDTSIALALGIVELTRQATYLVSVTAEPFRYYGLAALFYLAM 201 >gi|16119711|ref|NP_396417.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] gi|15162295|gb|AAK90858.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] Length = 242 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 115/210 (54%), Gaps = 8/210 (3%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPL 70 P + A++ TL I S +I G +A+++ ++ I + F Y+W+FRGTP+ Sbjct: 13 PAFFHGALL-TLVITVTSLFFGMIAGLIVALLQ----ESRIRPLQIFTLVYLWLFRGTPV 67 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L Q+ I+ LP G++ +FV+ +I+L+LN AY++EIIRS + ++ KGQ A A+G+ Sbjct: 68 LFQIIFIYNVLPTFGVMLSAFVSAVIALSLNEGAYMAEIIRSGLQAVKKGQRTAGLALGM 127 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 TR + +I++PQ P ++ I +LK++++ S + + E+ A + S+ ++ Sbjct: 128 TRFAVMCYIVIPQAARIVLPPTGNQMIGMLKTSALVSVVAVEELLLVANQTASSNFKYFE 187 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQH 220 YL LTS Q +E ++ + Sbjct: 188 ALTAAGIYYLALTSIFMGFQYLLERALDRK 217 >gi|322372981|ref|ZP_08047517.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus sp. C150] gi|321278023|gb|EFX55092.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus sp. C150] Length = 155 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 51/137 (37%), Positives = 87/137 (63%) Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 PH+G+ + + I + +AY++EI+RSSI ++ KGQW+A+ ++GL +K IRHIIL Sbjct: 17 PHVGVQLPALLCAFIGFSSVSAAYMAEILRSSISAVDKGQWEAARSLGLPKKSIIRHIIL 76 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ + + PL + I ++KS+S+A+ IT+P+IFQ A+ I Y + +Y +AF+Y Sbjct: 77 PQAMRIAVAPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREYDYMSMYILIAFIYWT 136 Query: 202 LTSFCYIIQIKIESSVT 218 L+ ++Q +E + Sbjct: 137 LSFTLELLQNHLEKRLA 153 >gi|301301393|ref|ZP_07207533.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300850998|gb|EFK78742.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 499 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 63/187 (33%), Positives = 113/187 (60%), Gaps = 7/187 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I TL I +S +I ++G +A++R+ + + L + Y+ RGTPL+VQ+ +++ Sbjct: 300 GIEYTLIITVVSVLIGFVLGIILALMRLGHNKLLHGLAVA-YIEFIRGTPLMVQVMFVYF 358 Query: 80 GLPHIGIVFDSFVAI---IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 G IG V S A+ II+++LN SAY++E+IRS I SI GQ +A+ ++G+++KQT Sbjct: 359 G---IGAVIQSLPALAAGIIAVSLNSSAYVAEVIRSGIESIAIGQTEAARSLGMSQKQTY 415 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +++++PQ I L +EFI+++K +S+ S I + ++ Q + S TY+ + Sbjct: 416 QYVVIPQAIKNIWPALGNEFITLIKESSIVSVIGVGDLMYQTQLVQSATYKGVAPLAITM 475 Query: 197 FVYLILT 203 +Y +LT Sbjct: 476 VIYFVLT 482 >gi|190404350|ref|YP_001960981.1| rcorf6 [Agrobacterium rhizogenes] gi|158322146|gb|ABW33563.1| rcorf6 [Agrobacterium rhizogenes] Length = 240 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 74/242 (30%), Positives = 124/242 (51%), Gaps = 35/242 (14%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA--------VIRIFFSDTIISLIM 58 + + + P LL ++ T+ +A S VI +++G ++ V+R F S Sbjct: 10 DFVFNPRPALL-RGLLTTVLVAFASMVIGVVLGLVLSLFGLSRWRVLRWFNSA------- 61 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF----------------VAIIISLTLNF 102 Y+++FRGTPLLVQ+ +I++GLP++ V D F VA + + L+ Sbjct: 62 --YIFVFRGTPLLVQVILIYFGLPYLTNV-DLFPQDVHLFGFISISGAIVAGVTAFALHE 118 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY SEI R +I S+ GQWDA A+G+T ++ IILPQ I PL ++ + K+ Sbjct: 119 AAYFSEISRGAIASVDHGQWDAGRAVGMTPGLLMQRIILPQAIRIMLPPLGNQMNGMFKA 178 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 TS+ I +PE+ + S TY+ +Y ++ YL LT+ +Q +E ++ Sbjct: 179 TSLLYLIAVPEMLFITDAVNSVTYKTFEVYLGVSIYYLALTTAWSFLQEALEKRYSKGFV 238 Query: 223 SV 224 S+ Sbjct: 239 SI 240 >gi|270290755|ref|ZP_06196979.1| polar amino acid transport system permease [Pediococcus acidilactici 7_4] gi|270280815|gb|EFA26649.1| polar amino acid transport system permease [Pediococcus acidilactici 7_4] Length = 217 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 115/197 (58%), Gaps = 2/197 (1%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +T+ ++ IS + S ++G + +IR + + +S ++ + + R PLL+ F +++GLP Sbjct: 22 ITIEVSVISIIFSYVLGGILGLIR-YLNVRYLSALVGVVIDVIRNLPLLLMFFFVYFGLP 80 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 ++GI + I++LT+ SA I+EIIR I+SI KGQ + + A GL+ Q +R+IILP Sbjct: 81 NLGIRLGILPSSILALTVFESAMIAEIIRGGIVSIDKGQMEGARANGLSYWQAMRYIILP 140 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI-IYCELAFVYLI 201 Q L S+FIS++K TS+A+ I +PE+ AQ I +I ++ LA +Y + Sbjct: 141 QAQVRMIPALVSQFISLIKDTSLATIIMLPEMMYHAQIIYGQNTNYIIPMFVALAGMYFV 200 Query: 202 LTSFCYIIQIKIESSVT 218 + II K+E + Sbjct: 201 VCYTLSIISRKLEQKLA 217 >gi|295399080|ref|ZP_06809062.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] gi|312110316|ref|YP_003988632.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. Y4.1MC1] gi|294978546|gb|EFG54142.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] gi|311215417|gb|ADP74021.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y4.1MC1] Length = 233 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/225 (30%), Positives = 125/225 (55%), Gaps = 23/225 (10%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTIISLIM 58 F+ I+ S P +L ++VTL I + ++ +G +A+++I +F+D Sbjct: 19 FSQIVPSIPFIL-EGVIVTLKIVIFAVLLGFALGVVLALMKIGRIKVLAWFADA------ 71 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 Y +FRGTPL++QL +I++G+P + G+ F + +I+ LN +AY+SEIIR+ I++I Sbjct: 72 --YTSVFRGTPLVLQLVLIYFGIPQLTGVDIGPFPSAVIAFGLNSAAYVSEIIRAGILAI 129 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ +A+ A+G+ K +R IILPQ + L +EFI++ K ++V + I ++ + Sbjct: 130 DKGQREAALALGIPYKLMMRDIILPQALKNILPALMNEFITLTKESAVVTVIGAMDVMRR 189 Query: 178 AQRIVSTTY---QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 A + Y +PL+I +Y +L ++ +E + + Sbjct: 190 AYIVGGQVYRYIEPLLIA---GLIYYVLVMLLTLLGKALEGRLRK 231 >gi|224476916|ref|YP_002634522.1| hypothetical protein Sca_1432 [Staphylococcus carnosus subsp. carnosus TM300] gi|222421523|emb|CAL28337.1| conserved hypothetical protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 491 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 62/185 (33%), Positives = 109/185 (58%), Gaps = 2/185 (1%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I T+ I+ I V+ + G +A++++ S + + Y+ RGTPLLVQ+F++F+ Sbjct: 290 GIKNTILISIIGVVLGAVFGAILALMKLS-SFKPLKWLATVYIEFIRGTPLLVQVFLVFF 348 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 G +G+ + + +I++ +N +AYI+EIIR+ I ++ KGQ +A+ ++GL QT++ Sbjct: 349 GTTAALGLDISAMICGMIAMVINCAAYIAEIIRAGINAVDKGQTEAARSLGLGYGQTMKT 408 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 IILPQ I L +EF++++K +S+ S I + EI AQ + ++ P A + Sbjct: 409 IILPQAIKNILPALGNEFVTVIKESSIVSVIGVSEIMFNAQVVQGASFDPFTPLLVAAIL 468 Query: 199 YLILT 203 Y ILT Sbjct: 469 YFILT 473 >gi|222086234|ref|YP_002544766.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221723682|gb|ACM26838.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 267 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 113/197 (57%), Gaps = 13/197 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + VT+ +A ++ + LI+GF +A+ + + + L + IFRG P L+ LF+I+ Sbjct: 51 GGLRVTITVAVLTLPLGLIVGFLVALAQQS-EERSLRLAAGVFTTIFRGLPELLTLFIIY 109 Query: 79 YG--------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 YG L ++G + ++FVA +I+L++ FSAY SE++ S+ +IPKGQ++A Sbjct: 110 YGMQILLQTVLAYVGYEGPVEINAFVAGMIALSIVFSAYCSEVLLSAFRAIPKGQYEAGD 169 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G R +T+R IILPQ I S L + ++++LK TS S I + +I + V +T Sbjct: 170 ALGFHRVRTMRLIILPQLIRISLPNLGNLWMNLLKDTSYVSIIGLADIVRQTGLAVRSTK 229 Query: 187 QPLIIYCELAFVYLILT 203 +P Y +YL+L Sbjct: 230 EPFFFYAVACSLYLVLA 246 >gi|110636300|ref|YP_676508.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110287284|gb|ABG65343.1| amino acid ABC transporter membrane protein 1, PAAT family [Chelativorans sp. BNC1] Length = 234 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 112/205 (54%), Gaps = 9/205 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPI--ACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 M++ W + ++ LLY A+ L AC + IG + + R + ++ Sbjct: 4 MQFGW---LWQNYDTLLYGALTTILLTIGACAA---GSAIGIIVGLCR-HRGNLLLRTCG 56 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV R TPLLVQ F+I++GL +G D A +++L +N AY +EI R+ SIP Sbjct: 57 AAYVEAIRNTPLLVQAFIIYFGLSSVGFRLDPLPAALVALVINCGAYSAEIFRAGFQSIP 116 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 Q +A+ ++ L++ QT ++ILPQ + VPLS +FI I+ ++S+ S I+ E+ A Sbjct: 117 PAQKEAAESLALSKIQTFVYVILPQALRNIWVPLSGQFILIMLASSIVSQISAEELTAAA 176 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT 203 +I S T++ +Y LA +YL L+ Sbjct: 177 SQIQSQTFRSFEVYVVLAALYLALS 201 >gi|260774959|ref|ZP_05883859.1| putative amino acid ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] gi|260609049|gb|EEX35208.1| putative amino acid ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] Length = 246 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 115/209 (55%), Gaps = 9/209 (4%) Query: 2 KYEWFNLIID-------SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII 54 Y+W ++D + + L A T+ I+ +S ++++IG +A+ + + + Sbjct: 19 DYQWGWYVLDPSTEQGQTNLKFLSAGFYDTITISLLSMTLAMLIGLLVALPSLSNARWLN 78 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 L YV + R P+LV L ++YGLP + I D F A +I+LT+ SA+++E+ R Sbjct: 79 GL-NRVYVEVIRSIPVLVLLLWVYYGLPTLLDISLDHFWAGVIALTVAESAFMAEVFRGG 137 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SI KGQ +A+ ++GL Q +R +ILPQ PL ++F+ ILK +S+ S I + + Sbjct: 138 IQSIAKGQHEAAESLGLNYWQKMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLSD 197 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + + A +V Y PL IY L YLIL Sbjct: 198 LTRRANELVVNEYLPLEIYTFLVLEYLIL 226 >gi|257093094|ref|YP_003166735.1| polar amino acid ABC transporter inner membrane subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045618|gb|ACV34806.1| polar amino acid ABC transporter, inner membrane subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 252 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 51/144 (35%), Positives = 90/144 (62%), Gaps = 3/144 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 YVW+ RGTPLL+Q+ ++ P + G+ F I+L+LN AY +E +R+ I+++ Sbjct: 87 YVWLIRGTPLLLQILFVWLAFPLLMPEGVELSDFACAAIALSLNVGAYNTECVRAGILAV 146 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +A+ A+GLT QT I+LPQ++ + L++ S++K +S+A I++ E+ Sbjct: 147 PHGQVEAARALGLTPMQTFMDIVLPQSMRVALPALANNLASLVKDSSLAYAISVVELTMV 206 Query: 178 AQRIVSTTYQPLIIYCELAFVYLI 201 R+ + +YQP+ ++ +A +YLI Sbjct: 207 GYRVQAESYQPIPVFITVAAIYLI 230 >gi|239833590|ref|ZP_04681918.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239821653|gb|EEQ93222.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 335 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 116/210 (55%), Gaps = 1/210 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F I L+ +V TL I+ S + ++ AV ++ + ++ + FY +F Sbjct: 119 FEFIARKVGFLISQGVVTTLYISTASIFFATVLALIGAVAKLS-KNGLVYGLATFYTSLF 177 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG PLL+Q+++I+ GLP +G V A I++L+L + AY++EI R+ I SIP+GQ + + Sbjct: 178 RGLPLLMQIYIIYLGLPQVGYVIGPIPAGILALSLCYGAYMTEIFRAGIESIPRGQQEGA 237 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL QT+ +ILPQ + P ++FI++LK +S+ S I + E+ A+ T Sbjct: 238 AALGLGPSQTMWLVILPQAMRIIIPPTGNQFIAMLKDSSLVSVIGVWELMYLARTQGQTE 297 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIES 215 ++ + + + +Y L+ Q K+E+ Sbjct: 298 FRHIEMLITASMIYWALSVVLEYGQAKLEA 327 >gi|148977575|ref|ZP_01814154.1| amino acid ABC transporter, permease protein [Vibrionales bacterium SWAT-3] gi|145963226|gb|EDK28493.1| amino acid ABC transporter, permease protein [Vibrionales bacterium SWAT-3] Length = 225 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 116/203 (57%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LII+S P L + T + C++ +I L + +A+ R + +I+ +++ F Sbjct: 3 FSLIIESLPIYL-GGLWTTAWMVCVALIIGLFVAIPLAIARNS-HNMLINAPAWSFIYFF 60 Query: 66 RGTPLLVQLFVIFYGL----PHIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ P G ++ +++ +++ LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQFFPVKGTLWENAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G++ +T R IILP + + S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMSTSKTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFESFLTAGLFYMALT 203 >gi|295700416|ref|YP_003608309.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD [Burkholderia sp. CCGE1002] gi|295439629|gb|ADG18798.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Burkholderia sp. CCGE1002] Length = 219 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 111/187 (59%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + + + P LL + +T+ + V++ ++G IA++R+ + ++S Sbjct: 1 MEWDW-SFVREILPILLQG-LEITVLATLLGAVVAAVVGMVIAILRLA-PNRVVSHGTSA 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL+ +FY LP IGI + A ++++ ++++ Y +E+ R+ I SIP+G Sbjct: 58 VAGFIRGTPLLVQLYFVFYVLPDIGIRMPALAAGVLAIGVHYATYAAEVYRAGIESIPRG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A L+ Q +H+ILP+ + L++ IS+ K T + S IT+ E+ A+ Sbjct: 118 QWEAAKACNLSPAQAWQHVILPEAVPPMVPALANYLISMFKETPLLSAITVLELMNQAKI 177 Query: 181 IVSTTYQ 187 I +T Y+ Sbjct: 178 IANTDYR 184 >gi|315222682|ref|ZP_07864571.1| ABC transporter, permease protein [Streptococcus anginosus F0211] gi|315188368|gb|EFU22094.1| ABC transporter, permease protein [Streptococcus anginosus F0211] Length = 268 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/159 (36%), Positives = 92/159 (57%), Gaps = 1/159 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +++ Y+WI RGTPLL+QL I+Y LP IG+ D A II+ TLN++AY +EI R I+S Sbjct: 105 LINIYIWIMRGTPLLLQLIFIYYVLPSIGVRLDRLPAAIIAFTLNYAAYFAEIFRGGILS 164 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP GQ++A+ + T QTIR IILPQ + + +E ++++K TS+ + + ++ Sbjct: 165 IPAGQYEAAKVLKFTPFQTIRFIILPQVVKVVLPSVFNEVMTLVKDTSLVYALGVSDLI- 223 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 A R + L +YL+L I+ ++E Sbjct: 224 LASRTAANRDASLAPMFIAGAIYLVLIGLVTIVSKQVEK 262 >gi|306843054|ref|ZP_07475678.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] gi|306286768|gb|EFM58316.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] Length = 323 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/172 (34%), Positives = 102/172 (59%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEI 109 + +I + FY +FRG PLL+Q+++I+ GLP IG V + A I++L+L + AY++EI Sbjct: 150 QNGVIYGLSTFYTSLFRGLPLLMQIYIIYLGLPQIGYVIGAIPAGILALSLCYGAYMTEI 209 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R+ I SIP GQ +A+ A+GL QT+ +ILPQ + P ++FI++LK +S+ S I Sbjct: 210 FRAGIESIPHGQKEAATALGLGSAQTMWLVILPQAMRIIIPPTGNQFIAMLKDSSLVSVI 269 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + E+ A+ T ++ + + + +Y IL+ IQ +IE ++ Sbjct: 270 GVWELMYVARTQGQTEFRHIEMLITASMIYWILSISFEFIQSRIERYYARYN 321 >gi|228954439|ref|ZP_04116464.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228974247|ref|ZP_04134817.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980838|ref|ZP_04141143.1| Arginine transport system permease protein artQ [Bacillus thuringiensis Bt407] gi|229180433|ref|ZP_04307776.1| Arginine transport system permease protein artQ [Bacillus cereus 172560W] gi|228603180|gb|EEK60658.1| Arginine transport system permease protein artQ [Bacillus cereus 172560W] gi|228779007|gb|EEM27269.1| Arginine transport system permease protein artQ [Bacillus thuringiensis Bt407] gi|228785587|gb|EEM33596.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228805096|gb|EEM51690.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 225 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 121/215 (56%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I +S + I+G +A+ +I +++ FY IF Sbjct: 11 FSAITPSIPYIL-KGLEVTLKIVAVSALAGFILGTLLALCKIA-RIRALNIAADFYTSIF 68 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P I G +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 69 RGTPLVLQLMIIYFGVPQIIGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 128 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 129 AMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 188 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y +L ++ IE + + Sbjct: 189 TFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKK 223 >gi|206971176|ref|ZP_03232127.1| amino acid ABC transporter, permease protein [Bacillus cereus AH1134] gi|218899316|ref|YP_002447727.1| amino acid ABC transporter, permease protein [Bacillus cereus G9842] gi|206733948|gb|EDZ51119.1| amino acid ABC transporter, permease protein [Bacillus cereus AH1134] gi|218541175|gb|ACK93569.1| amino acid ABC transporter, permease protein [Bacillus cereus G9842] gi|326941933|gb|AEA17829.1| arginine ABC transporter permease [Bacillus thuringiensis serovar chinensis CT-43] Length = 219 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 121/215 (56%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I +S + I+G +A+ +I +++ FY IF Sbjct: 5 FSAITPSIPYIL-KGLEVTLKIVAVSALAGFILGTLLALCKIA-RIRALNIAADFYTSIF 62 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P I G +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 63 RGTPLVLQLMIIYFGVPQIIGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 123 AMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y +L ++ IE + + Sbjct: 183 TFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKK 217 >gi|260439248|ref|ZP_05793064.1| amino acid ABC transporter, amino acid-binding/permease protein, His/Glu/Gln/Arg/opine family [Butyrivibrio crossotus DSM 2876] gi|292808262|gb|EFF67467.1| amino acid ABC transporter, amino acid-binding/permease protein, His/Glu/Gln/Arg/opine family [Butyrivibrio crossotus DSM 2876] Length = 236 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 62/184 (33%), Positives = 106/184 (57%), Gaps = 5/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH----FYVWIFRGTPLLVQLFVIFY 79 TL IA + +I ++IG IA R+ ++ I++ FYV +FRGTP++VQL V +Y Sbjct: 31 TLTIAVLGLIIGIVIGTLIATARVIPQYKVLPRILNKICSFYVALFRGTPIVVQLLVFYY 90 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 L P +G ++ LN +AYISEI+R I+S+ GQ +A A+GL+ T+ Sbjct: 91 VLLPLMGSRMTGIQVAVMVFGLNSAAYISEIMRGGIMSVDSGQMEAGRAVGLSFGTTMLK 150 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 I++PQ + + +E I+++K TSV S + +++ I S+ Y+ ++ Y +A + Sbjct: 151 IVIPQAVKNILPTMGNELIALIKDTSVVSFVGATDLYVAFSFIGSSNYEFMVPYLVMALI 210 Query: 199 YLIL 202 Y++L Sbjct: 211 YIVL 214 >gi|218510403|ref|ZP_03508281.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli Brasil 5] Length = 209 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/190 (35%), Positives = 105/190 (55%), Gaps = 2/190 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I D++P+LLY + TL I+ + + IG +R + L+ F + I Sbjct: 19 FSVIFDAWPRLLYGCWL-TLAISTKAMAMGFAIGLLCVALRRTGFGPFVWLVKGF-IEII 76 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP VQ F I+ GLP IGI A +++L LN AY +EIIR + SI KGQ +A Sbjct: 77 RNTPFPVQAFFIYLGLPSIGIRLAPDAAAVVALGLNGGAYAAEIIRGGVESIHKGQVEAG 136 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL Q R+IIL + S L+S+FI ++ ++SV ++I+ E+ Q + ST+ Sbjct: 137 RALGLNGFQVFRYIILRPALRVSFPALASQFILLMLTSSVVASISAMELASIGQELESTS 196 Query: 186 YQPLIIYCEL 195 ++ +Y L Sbjct: 197 FRSFEVYLTL 206 >gi|328956869|ref|YP_004374255.1| glutamine transport system permease protein GlnP [Carnobacterium sp. 17-4] gi|328673193|gb|AEB29239.1| glutamine transport system permease protein GlnP [Carnobacterium sp. 17-4] Length = 216 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 120/207 (57%), Gaps = 13/207 (6%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W N+ + L ++VT+ +A +S V S IIG + ++R + + S I+ V Sbjct: 7 FSWMNI------RFLLDGLLVTVEVAVLSIVFSFIIGAILGLLR-YMKIPVFSKIVGGIV 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + R PLL+ +F ++ LP IGI D F + + ++T+ SA +SEI+R+ + S+P GQ Sbjct: 60 DLIRNLPLLLIIFFTYFALPQIGIRLDIFWSAVAAMTIFESAMLSEIMRAGLNSVPSGQM 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A + GLT QT+ II+PQ P+ S+ +S++K TS+A+ I++PE+ A+ I Sbjct: 120 EAGRSTGLTYLQTLWIIIIPQAFKAMVPPIVSQLVSLIKDTSLATIISLPELTHNARIIY 179 Query: 183 --STTYQPLIIYCELAFVYLILTSFCY 207 +TTY + ++ LAF Y I+ CY Sbjct: 180 GQNTTYV-IPMFIALAFFYFII---CY 202 >gi|300215129|gb|ADJ79545.1| Amino acid ABC transporter [Lactobacillus salivarius CECT 5713] Length = 499 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 66/206 (32%), Positives = 118/206 (57%), Gaps = 7/206 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 MK N + S+ I TL I +S +I ++G +A++R+ + + L + Sbjct: 281 MKQSSKNNTMASYWTYFAKGIEYTLIITVVSVLIGFVLGIILALMRLGHNKLLHGLAVA- 339 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI---IISLTLNFSAYISEIIRSSIISI 117 Y+ RGTPL+VQ+ +++G IG V S A+ II+++LN AY++E+IRS I SI Sbjct: 340 YIEFIRGTPLMVQVMFVYFG---IGAVIQSLPALAAGIIAVSLNSGAYVAEVIRSGIESI 396 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQ +A+ ++G+++KQT +++++PQ I L +EFI+++K +S+ S I + ++ Sbjct: 397 AIGQTEAARSLGMSQKQTYQYVVIPQAIKNIWPALGNEFITLIKESSIVSVIGVGDLMYQ 456 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 Q + S TY+ + +Y +LT Sbjct: 457 TQLVQSATYKGVAPLAITMVIYFVLT 482 >gi|260655737|ref|ZP_05861206.1| L-cystine ABC transporter, permease protein [Jonquetella anthropi E3_33 E1] gi|260629353|gb|EEX47547.1| L-cystine ABC transporter, permease protein [Jonquetella anthropi E3_33 E1] Length = 226 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/194 (35%), Positives = 110/194 (56%), Gaps = 13/194 (6%) Query: 29 CISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-LPHI-GI 86 C++F+I++++ I + FF Y+ FRGTPL+ QLF ++G LP I G Sbjct: 35 CLAFLIAIVMDLRIPGLSQFF---------RLYISFFRGTPLMAQLFCFYFGILPAIRGA 85 Query: 87 V--FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQT 144 V SF A +I L+L +AY++E +R++I S+PKGQ++A+ +IG+T Q +R IILPQ Sbjct: 86 VKSVSSFQAALIILSLASAAYMAESLRAAIGSVPKGQFEAAQSIGMTYPQAMRRIILPQA 145 Query: 145 ITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 + + L S FI+I+K TS+ I + E+ AQ S Y+ L Y + V+ +T+ Sbjct: 146 VRVALPTLFSSFINIVKDTSLVFAIGVKEMMAQAQLEGSGNYRYLEAYLCVLLVFWAITA 205 Query: 205 FCYIIQIKIESSVT 218 Q +E + Sbjct: 206 VMGRTQRALEGRLA 219 >gi|182419568|ref|ZP_02950816.1| amino acid ABC transporter, permease protein PEB1 [Clostridium butyricum 5521] gi|237668932|ref|ZP_04528916.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376603|gb|EDT74178.1| amino acid ABC transporter, permease protein PEB1 [Clostridium butyricum 5521] gi|237657280|gb|EEP54836.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium butyricum E4 str. BoNT E BL5262] Length = 242 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 116/207 (56%), Gaps = 10/207 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++W L D + ++VT+ + + +++++G V+ ++ +I YV Sbjct: 8 FKWEALFTDY--HIFLEGLIVTIEVGLLGLALAIVLGTISGVMSTS-KIKLLRIISRVYV 64 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I + TPL++Q+F +F GLP+I IV F+ I+ + + AYISE++R+ I SI KGQ+ Sbjct: 65 EIIQNTPLVIQVFFLFNGLPYINIVLPVFLIGILGVGIYHGAYISEVVRTGITSISKGQF 124 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +ASY+ G + +T+R+IILPQTI PL+++ ++++K+TSV + I ++ A Sbjct: 125 EASYSQGFSHIETMRYIILPQTIKIIIPPLTNQLVNLIKNTSVLAMIAGADLMHNADSWS 184 Query: 183 STT--YQPLIIYCELAFVYLILTSFCY 207 S Y P Y +Y +L CY Sbjct: 185 SQNMFYGP--AYVVTGILYFVL---CY 206 >gi|255659864|ref|ZP_05405273.1| polar amino acid uptake family ABC transporter, permease protein [Mitsuokella multacida DSM 20544] gi|260847943|gb|EEX67950.1| polar amino acid uptake family ABC transporter, permease protein [Mitsuokella multacida DSM 20544] Length = 235 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 122/201 (60%), Gaps = 9/201 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I SFP LL + +TL + S ++ +++G IAV+RI +I+ ++ ++ RGT Sbjct: 10 MIKSFPTLL-GMVHITLLVTIFSAIVGILLGAAIAVLRIQ-CVPVIAPLLRIFISFMRGT 67 Query: 69 PLLVQLFVIFYGLP----HIGIVFDSF--VAIIISL-TLNFSAYISEIIRSSIISIPKGQ 121 P LVQLF+ ++G+P H+GI +A ++++ TL+ +AY +EI+RSSI+++P G+ Sbjct: 68 PFLVQLFLAYFGVPEILAHVGISMKGVPPLAFVLAVFTLHMAAYGAEILRSSILAVPVGE 127 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++G+T Q R ++LPQ + L + I ++K TS+ + + +I + A+ + Sbjct: 128 KEAAMSLGMTSFQMYRRVVLPQAFQMAMPALINTVIGVVKGTSLIFNVGVVDIMRKAELM 187 Query: 182 VSTTYQPLIIYCELAFVYLIL 202 + + L +Y ++A +Y IL Sbjct: 188 AGNSQRSLELYVDVAVIYGIL 208 >gi|330448488|ref|ZP_08312136.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492679|dbj|GAA06633.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 272 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 123/199 (61%), Gaps = 13/199 (6%) Query: 4 EWFNL-IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 EWF+ +ID +++TL I+ IS + +++ G A++R+ S + + Y+ Sbjct: 63 EWFSAELID--------GLLITLKISAISLIFTVLFGLITALLRVSHS-VVGRGLARGYI 113 Query: 63 WIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + R TPLLVQ++++++ P +G+ + F +++L+L AY +EI R+ +I+IPKGQ Sbjct: 114 ELIRNTPLLVQIYLLYFVFGPMLGL--ERFTTAVLALSLFQGAYTAEIFRAGLINIPKGQ 171 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++A+ ++GL++ + R+IILPQ + PL++E +S++K++S+ S + I ++ + I Sbjct: 172 FEAAESLGLSKMDSYRYIILPQMLRRILPPLTNEAVSLVKNSSIVSIMAIFDLTTQGRDI 231 Query: 182 VSTTYQPLIIYCELAFVYL 200 V+ T P I+ +A +YL Sbjct: 232 VADTAMPFEIWFTIAAMYL 250 >gi|303228628|ref|ZP_07315454.1| putative glutamine ABC transporter, permease protein GlnP [Veillonella atypica ACS-134-V-Col7a] gi|302516720|gb|EFL58636.1| putative glutamine ABC transporter, permease protein GlnP [Veillonella atypica ACS-134-V-Col7a] Length = 218 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 55/171 (32%), Positives = 102/171 (59%), Gaps = 4/171 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ + C+ +V+S+ G +A++R+ ++ I+ +V++ RGTPL++Q+ +++ Sbjct: 15 GLKVTIALFCVVWVLSIPGGIILALLRLS-KLPVVDKIVEAFVYLMRGTPLMLQILFMYF 73 Query: 80 GLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 LP + I D A +++ LN++AY+ EI R I SIP+GQ++ + +G T QT+ Sbjct: 74 ALPIMTDGAIQMDDATAAVVTFVLNYAAYLCEIFRGGIQSIPRGQYEGAKVLGFTYGQTM 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 R IILPQ PL++E I++LK TS+ + + +I + + IV + Sbjct: 134 RTIILPQMFKRVLPPLANETINLLKDTSLVYVLAMNDILRITKSIVQRDFD 184 >gi|228902666|ref|ZP_04066816.1| Arginine transport system permease protein artQ [Bacillus thuringiensis IBL 4222] gi|228941315|ref|ZP_04103868.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228967196|ref|ZP_04128232.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar sotto str. T04001] gi|229071660|ref|ZP_04204877.1| Arginine transport system permease protein artQ [Bacillus cereus F65185] gi|229081412|ref|ZP_04213914.1| Arginine transport system permease protein artQ [Bacillus cereus Rock4-2] gi|229152355|ref|ZP_04280547.1| Arginine transport system permease protein artQ [Bacillus cereus m1550] gi|229192365|ref|ZP_04319329.1| Arginine transport system permease protein artQ [Bacillus cereus ATCC 10876] gi|228591145|gb|EEK49000.1| Arginine transport system permease protein artQ [Bacillus cereus ATCC 10876] gi|228630963|gb|EEK87600.1| Arginine transport system permease protein artQ [Bacillus cereus m1550] gi|228701902|gb|EEL54386.1| Arginine transport system permease protein artQ [Bacillus cereus Rock4-2] gi|228711455|gb|EEL63413.1| Arginine transport system permease protein artQ [Bacillus cereus F65185] gi|228792565|gb|EEM40131.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar sotto str. T04001] gi|228818474|gb|EEM64546.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228856981|gb|EEN01491.1| Arginine transport system permease protein artQ [Bacillus thuringiensis IBL 4222] Length = 222 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 121/215 (56%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I +S + I+G +A+ +I +++ FY IF Sbjct: 8 FSAITPSIPYIL-KGLEVTLKIVAVSALAGFILGTLLALCKIA-RIRALNIAADFYTSIF 65 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P I G +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 66 RGTPLVLQLMIIYFGVPQIIGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 125 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 126 AMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 185 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y +L ++ IE + + Sbjct: 186 TFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKK 220 >gi|15965624|ref|NP_385977.1| amino acid ABC transporter permease [Sinorhizobium meliloti 1021] gi|307314028|ref|ZP_07593641.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|307321205|ref|ZP_07600607.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|15074805|emb|CAC46450.1| Amino acid transport system permease [Sinorhizobium meliloti 1021] gi|306893107|gb|EFN23891.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306899150|gb|EFN29789.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 267 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 66/198 (33%), Positives = 113/198 (57%), Gaps = 16/198 (8%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 +VT +A + + L+IGFF+A+ + + + L + Y IFRG P L+ LF+++YGL Sbjct: 54 LVTASLAVATLPVGLVIGFFVALAKQS-EEKSLRLAGNIYTTIFRGLPELLTLFIVYYGL 112 Query: 82 P------------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 + ++FVA +I+L + FSAY SE++ S+ +IP GQ++A A+G Sbjct: 113 QILVQQFLATVGYEGAVEINAFVAGMIALGVVFSAYCSEVLLSAFKAIPHGQYEAGDALG 172 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT---AQRIVSTTY 186 L R +T+R IILPQ I + L + ++++LK T++ S I +P+I + A R+ + Sbjct: 173 LHRGKTMRLIILPQLIRIALPGLGNLWMALLKDTALVSVIGLPDILRQTGIAARVTKHAF 232 Query: 187 QPLIIYCELAFVYLILTS 204 + I C L V +++S Sbjct: 233 EFFGIACVLFLVLAMISS 250 >gi|300992026|ref|ZP_07179758.1| glutamine ABC transporter permease protein [Escherichia coli MS 200-1] gi|300305425|gb|EFJ59945.1| glutamine ABC transporter permease protein [Escherichia coli MS 200-1] Length = 219 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/220 (30%), Positives = 122/220 (55%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P L+ A +TL I+ + L+IG R F I + + Sbjct: 1 MQFDW-SAIWPAIPLLIEGA-KMTLWISVLGLAGGLVIGLLAGFARTF-GGWIANHVALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A + ++ +N AYI+EI R +++SI Sbjct: 58 FIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVGTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R +TIR++ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A YLI+T I ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMK 217 >gi|296159866|ref|ZP_06842687.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295889849|gb|EFG69646.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 248 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 62/191 (32%), Positives = 106/191 (55%), Gaps = 1/191 (0%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 + +L + VTL + +S V+ I+G A + + ++ YV + R TP +V Sbjct: 13 YAGMLARGVAVTLGLTAVSTVLGAIVGIAGASVAVA-GPKWARWVVASYVELIRNTPFIV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF +F+GLP +GI D A I+++T+N AY EI+R+ I SI +GQ A+ A+GL Sbjct: 72 QLFFVFFGLPSLGIHIDEVQAAILAMTVNLGAYAIEIVRAGIDSISRGQVQAAQALGLHG 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +Q R+++LPQ I L S+ + ++ ++V S I++P++ A I S ++ Y Sbjct: 132 RQVFRYVVLPQAIANVFPALLSQVLIVMLGSAVVSQISVPDLTYAANFIQSRNFRSFESY 191 Query: 193 CELAFVYLILT 203 + YL+L+ Sbjct: 192 LIITATYLLLS 202 >gi|29840303|ref|NP_829409.1| amino acid ABC transporter, permease protein [Chlamydophila caviae GPIC] gi|29834652|gb|AAP05287.1| amino acid ABC transporter, permease protein [Chlamydophila caviae GPIC] Length = 217 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 113/192 (58%), Gaps = 5/192 (2%) Query: 24 TLPIACISFVISLIIGFFIAVI-RIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 TL ++ IS + ++G I + +F I + + YV + RGTPL +Q+ + ++GLP Sbjct: 18 TLCVSGISILFGSLLGLIIGTMTSRYFPCRITRWLGNLYVTVIRGTPLFIQILIFYFGLP 77 Query: 83 HIGIVFDS--FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 I I D +A +I+L++N SAY++E IR I ++ GQW+++ +G + Q +II Sbjct: 78 SI-IRLDPTPLMAGLIALSINSSAYLAESIRGGINALSVGQWESAKVLGYKKSQIFAYII 136 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 PQ L++EF++++K +S+ + +PE+ + ++ IVS P+ +Y A +YL Sbjct: 137 YPQVFKNILPSLTNEFVALIKESSILMVVGVPELTKVSKDIVSRELNPMEMYSICAALYL 196 Query: 201 ILTS-FCYIIQI 211 ++TS F Y+ ++ Sbjct: 197 LMTSLFSYVARL 208 >gi|229047847|ref|ZP_04193426.1| Arginine transport system permease protein artQ [Bacillus cereus AH676] gi|229111627|ref|ZP_04241178.1| Arginine transport system permease protein artQ [Bacillus cereus Rock1-15] gi|229146727|ref|ZP_04275093.1| Arginine transport system permease protein artQ [Bacillus cereus BDRD-ST24] gi|228636747|gb|EEK93211.1| Arginine transport system permease protein artQ [Bacillus cereus BDRD-ST24] gi|228672009|gb|EEL27302.1| Arginine transport system permease protein artQ [Bacillus cereus Rock1-15] gi|228723508|gb|EEL74874.1| Arginine transport system permease protein artQ [Bacillus cereus AH676] Length = 225 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 121/215 (56%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I +S + I+G +A+ +I +++ FY IF Sbjct: 11 FSAITPSIPYIL-KGLEVTLKIVAVSALAGFILGTLLALCKIA-RIRALNIAADFYTSIF 68 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P I G +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 69 RGTPLVLQLMIIYFGVPQIIGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 128 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 129 AMALGVPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 188 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y +L ++ IE + + Sbjct: 189 TFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKK 223 >gi|291549386|emb|CBL25648.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Ruminococcus torques L2-14] Length = 236 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 64/184 (34%), Positives = 104/184 (56%), Gaps = 5/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFS----DTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 TL IA +I ++IG IA +R+ +++ I FYV +FRGTP++VQL + +Y Sbjct: 31 TLLIAICGLIIGIVIGTLIATVRVIPKYKTLPRVLNHICSFYVALFRGTPMVVQLLIFYY 90 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 L P G+ ++ LN AYISEI+RS I S+ GQ +A A+GL+ ++ Sbjct: 91 VLLPIFGVKITGVQVSMVVFGLNSGAYISEIMRSGIQSVDPGQMEAGRAVGLSFGTSMMK 150 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 I++PQ + L +EFIS++K TSV S + +++ I S +Y+ ++ Y +A + Sbjct: 151 IVIPQAVKNILPTLGNEFISLIKETSVVSFVGAADLYVAFNYIGSNSYEFMVPYLVMALI 210 Query: 199 YLIL 202 Y+ L Sbjct: 211 YIAL 214 >gi|229086725|ref|ZP_04218892.1| Arginine transport system permease protein artQ [Bacillus cereus Rock3-44] gi|228696599|gb|EEL49417.1| Arginine transport system permease protein artQ [Bacillus cereus Rock3-44] Length = 219 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 121/215 (56%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I +S + I+G +A+ +I ++++ Y IF Sbjct: 5 FSAITPSIPYIL-KGLEVTLQIVAVSALFGFILGTLLALCKIA-RIKVLNIAADLYTSIF 62 Query: 66 RGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P IG +F+A +++ +LN AY+SEIIR+ I ++ KGQ +A Sbjct: 63 RGTPLVLQLMIIYFGVPQMIGYDIPAFLAAVLAFSLNSGAYMSEIIRAGIQAVDKGQTEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +++IILPQ + L +EF ++ K ++V + I ++ + A + Sbjct: 123 AMALGVPYGKMMKNIILPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + VY IL + IE + + Sbjct: 183 TFKYLEPLLFVGLVYYILVIILTFVGKAIEGRMKK 217 >gi|209551038|ref|YP_002282955.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536794|gb|ACI56729.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 216 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 98/143 (68%), Gaps = 2/143 (1%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ +F+GTPLL+QLFV++YG+ +GI ++++A+ I+ TL+ SA++ EI R SI ++PKG Sbjct: 55 YIALFQGTPLLMQLFVVYYGVALLGIDVNAWIAVAIAFTLHASAFLGEIWRGSIEAVPKG 114 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF-ISILKSTSVASTITIPEIFQTAQ 179 Q +A+ A+GL ++ +ILPQ + S +P + F + ++K TS+A+ + E+ + Q Sbjct: 115 QSEAANALGLHYVSRMKDVILPQALKIS-MPATIGFLVQLIKGTSLAAIVGFIELTRAGQ 173 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 I + TY+PL+++ + +Y I+ Sbjct: 174 IISNQTYRPLLVFGIVGVIYFII 196 >gi|312958425|ref|ZP_07772945.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311286968|gb|EFQ65529.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 229 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 125/209 (59%), Gaps = 12/209 (5%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EW +II P+ + AI+ TL + I+ ++ LI+ + + R + SL + Y++ Sbjct: 2 EW-EVIIKWLPKFIQGAIL-TLELVGIAVILGLILAIPLGIARSSKRWYVRSL-PYAYIF 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIII---------SLTLNFSAYISEIIRSSI 114 FRGTPLLVQLF+++YGL + SF+ + ++TL+ +AYI+EI+R +I Sbjct: 59 FFRGTPLLVQLFLVYYGLAQFDSIRSSFMWTYLRDPFWCAPATMTLHTAAYIAEILRGAI 118 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IP G+ +A+ A+G++R +T+ +IILP+ S+E I +LK++S+AST+T+ E+ Sbjct: 119 QAIPPGEIEAARALGMSRPKTLLYIILPRAARIGLPAYSNEVILMLKASSLASTVTLLEL 178 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I++ Y + ++ YL+++ Sbjct: 179 TGMARTIIARNYLTVEMFFTAGVFYLLIS 207 >gi|291486571|dbj|BAI87646.1| hypothetical protein BSNT_06059 [Bacillus subtilis subsp. natto BEST195] Length = 224 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 122/219 (55%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W +I +FP L+ A+ +TL +A + + ++I G +A+I ++ + Y+ Sbjct: 5 DW-EFMISAFPTLI-QALPITLFMAIAAMIFAIIGGLILALITKN-KIPVLHQLSKLYIS 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI---IISLTLNFSAYISEIIRSSIISIPKG 120 FRG P LVQLF+I+YGLP + A+ II L+L +AY++EI R+++ S+ G Sbjct: 62 FFRGVPTLVQLFLIYYGLPQLFPEMSKMTALTAAIIGLSLKNAAYLAEIFRAALNSVDDG 121 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A ++G+T+ Q R IILPQ I + + FI +LK TS+A T+ + E+F + Sbjct: 122 QLEACLSVGMTKFQAYRRIILPQAIRNAIPATGNTFIGLLKETSLAFTLGVMEMFAQGKM 181 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S + Y +A VY ILT ++Q E ++++ Sbjct: 182 YASGNLKYFETYLAVAIVYWILTMIYSMLQDLFERAMSK 220 >gi|228960421|ref|ZP_04122073.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar pakistani str. T13001] gi|229129433|ref|ZP_04258404.1| Arginine transport system permease protein artQ [Bacillus cereus BDRD-Cer4] gi|228654038|gb|EEL09905.1| Arginine transport system permease protein artQ [Bacillus cereus BDRD-Cer4] gi|228799282|gb|EEM46247.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar pakistani str. T13001] Length = 222 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 121/215 (56%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I +S + I+G +A+ +I +++ FY IF Sbjct: 8 FSAITPSIPYIL-KGLEVTLKIVAVSALAGFILGTLLALCKIA-RIRALNIAADFYTSIF 65 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P I G +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 66 RGTPLVLQLMIIYFGVPQIIGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 125 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 126 AMALGVPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 185 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y +L ++ IE + + Sbjct: 186 TFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKK 220 >gi|251787824|ref|YP_003002545.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247536445|gb|ACT05066.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 227 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 123/216 (56%), Gaps = 9/216 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ FPQ+L + TL +A +S + ++++G +A+IR ++S ++ Y+ +FRG Sbjct: 12 LLKVFPQVLMY-LPTTLLLAVVSMLFAIVLGLVLALIRES-RFVVVSKLVEIYISLFRGI 69 Query: 69 PLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 P LVQLF+I++GLP + G+ + A II +L SAY++EI R+++ S+ GQ + Sbjct: 70 PSLVQLFIIYFGLPQLFPSLNGL--SAMTAAIIGFSLKNSAYMAEIFRAALASVDFGQTE 127 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A ++G+ + Q R I+LPQ + + + FIS++K TSVA + + E+F + I + Sbjct: 128 AGLSVGMNKVQIYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFAEGKMIAA 187 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + + + + +Y +L +Q ++E ++ Sbjct: 188 ESLRFFETFLVVGLIYWLLIVVYSWLQSQLEKKLSH 223 >gi|229013364|ref|ZP_04170504.1| Arginine transport system permease protein artQ [Bacillus mycoides DSM 2048] gi|229134968|ref|ZP_04263774.1| Arginine transport system permease protein artQ [Bacillus cereus BDRD-ST196] gi|228648470|gb|EEL04499.1| Arginine transport system permease protein artQ [Bacillus cereus BDRD-ST196] gi|228747957|gb|EEL97822.1| Arginine transport system permease protein artQ [Bacillus mycoides DSM 2048] Length = 225 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 121/215 (56%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I S V+ I+G +A+ +I ++++ Y IF Sbjct: 11 FSAITPSIPYIL-KGLEVTLKIVAASAVVGFILGTLLALCKIA-RIRVLNIAADIYTSIF 68 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P + G +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 69 RGTPLVLQLMIIYFGVPQMMGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 128 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 129 AMALGIPYSKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 188 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y IL ++ IE + + Sbjct: 189 TFKYLEPLLFVGLIYYILVIILTLVGKAIEGRMKK 223 >gi|296131956|ref|YP_003639203.1| polar amino acid ABC transporter, inner membrane subunit [Thermincola sp. JR] gi|296030534|gb|ADG81302.1| polar amino acid ABC transporter, inner membrane subunit [Thermincola potens JR] Length = 221 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 56/138 (40%), Positives = 92/138 (66%), Gaps = 6/138 (4%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIR 111 IS + +Y+ + RGTPLL+Q++ +++ +I G D F+A +I+ +LN++AY +EI R Sbjct: 53 ISNPIKWYISVMRGTPLLLQIWFVYFTPSYILPGFSLDRFIAAVIAFSLNYAAYFAEIYR 112 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I+SIP+GQ++A+ +G TR QT IILPQ I P+S+E I+++K T++ + + I Sbjct: 113 GGILSIPRGQYEAAAVLGFTRTQTFVRIILPQVIKRILPPVSNEVITLVKDTALVTVLGI 172 Query: 172 PEIFQTAQ----RIVSTT 185 E+F+ A+ RI STT Sbjct: 173 SELFRVAKNESSRIFSTT 190 >gi|260891038|ref|ZP_05902301.1| amino acid ABC transporter, permease protein [Leptotrichia hofstadii F0254] gi|260859065|gb|EEX73565.1| amino acid ABC transporter, permease protein [Leptotrichia hofstadii F0254] Length = 219 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/182 (33%), Positives = 106/182 (58%), Gaps = 2/182 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN II++ P+ L A+ +T+ I V S++IG A++ +++ I+ Y+ + Sbjct: 3 FNFIIENIPKYL-EAMKLTVFIGIFGIVFSILIGIVCALV-LYYRVPAARQIVGIYIELS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPL++QLF +++GLP IGI F+S + +I L+ +Y+ E RS + S+ KGQ ++ Sbjct: 61 RNTPLVIQLFFLYFGLPKIGITFNSHICAVIGLSFLGGSYMCEAFRSGLESVTKGQRESG 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IGLT Q I ++ILPQ T S +++ I +LK TSV + + E+ + ++ Sbjct: 121 LSIGLTESQLITNVILPQAFTVSFPAIAANIIFLLKETSVIGILALMELMYLTRDLIGLY 180 Query: 186 YQ 187 Y+ Sbjct: 181 YK 182 >gi|296116099|ref|ZP_06834718.1| polar amino acid ABC transporter, inner membrane subunit [Gluconacetobacter hansenii ATCC 23769] gi|295977356|gb|EFG84115.1| polar amino acid ABC transporter, inner membrane subunit [Gluconacetobacter hansenii ATCC 23769] Length = 485 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 116/202 (57%), Gaps = 6/202 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL +A S V ++II IA +R+ + ++ Y++IFR P L+QL ++ LP Sbjct: 275 VTLLLALASHVTAIIISIPIA-LRLGGKPGPVRALLGLYIYIFRAVPTLLQLLFVWNALP 333 Query: 83 HIGIVFDS-----FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 +F F+A ISL+LN SAY +EI RS+++++ GQ A+ A+G+ QT R Sbjct: 334 QFCPIFREAWFSPFLAAWISLSLNESAYQAEINRSALVAVDAGQIAAARALGMGTGQTYR 393 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 H++ PQ + + P ++FI++LK+TS+AS I++ E+ AQ V+ +++ Y Sbjct: 394 HVVFPQALRIALPPTLNDFITLLKTTSLASVISLHELLSVAQVEVARSFEFSEYYAAALV 453 Query: 198 VYLILTSFCYIIQIKIESSVTQ 219 YL++ F ++Q +E + + Sbjct: 454 YYLLMVLFFIMLQKIMEHRLGR 475 >gi|227114736|ref|ZP_03828392.1| amino-acid ABC transporter permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 223 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/182 (33%), Positives = 109/182 (59%), Gaps = 5/182 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ FPQ+L + TL +A +S ++++G +A++R ++ I+ Y+ +FRG Sbjct: 8 LLKVFPQVLMY-LPTTLFLAVVSMFFAMVLGLILALVRESKI-VVVVKIVELYISLFRGI 65 Query: 69 PLLVQLFVIFYGLPHI--GIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 P LVQLF+I++GLP + G+ D+ A II +L SAY++EI R+ + S+ GQ +A Sbjct: 66 PSLVQLFIIYFGLPQLFPGLSNLDAMTAAIIGFSLKTSAYMAEIFRAGLASVDFGQTEAG 125 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IG+++ Q R I+LPQ + + + FIS++K TSVA + + E+F + I + + Sbjct: 126 LSIGMSKAQVYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFAEGKMIAAES 185 Query: 186 YQ 187 + Sbjct: 186 LR 187 >gi|299820601|ref|ZP_07052491.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] gi|299818096|gb|EFI85330.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] Length = 213 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 45/123 (36%), Positives = 81/123 (65%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I+ YVWI RGTPLL+QL I+YG P+ ++ + + A++ + LN++AY +EI R I+S Sbjct: 50 IIDTYVWIMRGTPLLLQLIFIYYGAPYFHLILERYEAVLFAFVLNYAAYFAEIFRGGILS 109 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I KGQ++++ +GL+ QT+R I+LPQ I + +E I+++K +S+ + + ++ + Sbjct: 110 IEKGQYESAKVLGLSYGQTVRKIVLPQVIKRVLPAIGNEVINLVKDSSLVYVLGLGDLLR 169 Query: 177 TAQ 179 + Sbjct: 170 AGK 172 >gi|218681463|ref|ZP_03529350.1| arginine transporter permease subunit ArtQ [Rhizobium etli CIAT 894] Length = 223 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 118/215 (54%), Gaps = 8/215 (3%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 + + L +++TL +A S V +I +A + I+ + +IM YV + RG P L+ Sbjct: 8 YKEQLLQGLLMTLGVAVGSLVAGSLIAVVLAPLAIYGNRVTRRIIMG-YVSLIRGLPELL 66 Query: 73 QLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 +F+IFYG L + D+ A I +L++ +AY++EI+R +++S+ GQW+A+ Sbjct: 67 VIFLIFYGGTVLLTNLTGSYVEVDAMSAGIAALSVVAAAYLTEILRGALLSVSAGQWEAA 126 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G R + R +ILPQ + + L ++++ ILK +++ S + + E+ + + T Sbjct: 127 LALGFRRPRAFRLVILPQMMARALPGLGNQWLVILKESALVSVVGLEELMRKSVVAAGAT 186 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +QPL Y A +Y+ +T ++ ES +T H Sbjct: 187 HQPLAFYLTAAGLYVSITGVSSLLLKAYESRLTSH 221 >gi|167589673|ref|ZP_02382061.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ubonensis Bu] Length = 228 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 107/196 (54%), Gaps = 6/196 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL---- 56 M Y+ + + + + +TL + ++ V+ + IG A + +D +++ Sbjct: 1 MSYQLQFGELAEYAGVFASGATITLALTAVATVLGVAIGVLGAAA--YSADAPVAMRLRP 58 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ YV R TP +VQLF IF+GLP +G+ D + A I+++TLN AY EI+R+ + + Sbjct: 59 LIGAYVEAIRNTPFVVQLFFIFFGLPALGVHIDEYTAAILAMTLNLGAYSVEIVRAGVAA 118 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P G +A+ A+ ++R Q +RH++LPQ + LSS+ + + ++V S I++ ++ Sbjct: 119 VPNGHLEAASALAMSRAQMLRHVVLPQALAKVFPALSSQIVITMLGSAVVSQISVADLTY 178 Query: 177 TAQRIVSTTYQPLIIY 192 A I S ++ Y Sbjct: 179 AAGYIQSRNFRAFETY 194 >gi|307321919|ref|ZP_07601302.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Sinorhizobium meliloti AK83] gi|306892432|gb|EFN23235.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Sinorhizobium meliloti AK83] Length = 217 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 115/209 (55%), Gaps = 6/209 (2%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH--FYVWIFRGTPLL 71 P LL A V+T+ F +LI G ++ IF I++L + +++ R TPLL Sbjct: 13 PTLLQGA-VITVVATFGGFAGALIGG---GILSIFLRTNIVALRIFAIGFIYCIRNTPLL 68 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 VQL+ +FY LP +GI + I+ L++++S + SE+ R+ I S+P+GQ++A+ A+GL Sbjct: 69 VQLYFVFYVLPDMGITISALGCGILGLSIHYSTFFSEVYRAGIASVPRGQFEAADALGLH 128 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 + I+ PQ I L + + + K T + + IT+ E+F AQ I TY+ Sbjct: 129 TTKKWMFIVGPQAIKPILPVLGNYLVGMFKETPLLAAITVVELFGKAQNIAGQTYRYNEP 188 Query: 192 YCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y +A ++LI++ C K+E++ +H Sbjct: 189 YLMVALIFLIISVPCSFAIRKLETNGNRH 217 >gi|294084530|ref|YP_003551288.1| ABC transporter permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292664103|gb|ADE39204.1| ABC transporter permease protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 224 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/225 (28%), Positives = 115/225 (51%), Gaps = 16/225 (7%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTIIS 55 YEW + + + L A TL + + L++G +A R+ F +D II Sbjct: 2 YEWDFIPVLTETGFLLAGFRNTLVLTATALSGGLVVGLVLAFARLSSRRWVRFPADVIIE 61 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 +FR TP LVQLF F+GLP + + F+A ++ T+ A+ +EI R+ I Sbjct: 62 --------VFRTTPPLVQLFWFFFGLPIVLAVEMTPFLAAALTFTIQSGAFFAEIFRAGI 113 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +SI GQW+A+ AIG+ Q +R IILPQ + + I ++K+T++ +T++ ++ Sbjct: 114 VSIEHGQWEAAKAIGMRYNQAMRRIILPQAVKRMFPSMMERSIELMKTTTLVATVSYADL 173 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 A + T++PL ++ +A +Y + S + + E +T+ Sbjct: 174 LFQANELAQKTFRPLEVFTVVALIYFVTISIFSFLASRFERRLTR 218 >gi|113460399|ref|YP_718461.1| arginine transporter permease subunit ArtQ [Haemophilus somnus 129PT] gi|170717489|ref|YP_001783479.1| arginine ABC transporter permease [Haemophilus somnus 2336] gi|112822442|gb|ABI24531.1| amino acid ABC transporter membrane protein 1, PAAT family [Haemophilus somnus 129PT] gi|168825618|gb|ACA30989.1| polar amino acid ABC transporter, inner membrane subunit [Haemophilus somnus 2336] Length = 223 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 130/232 (56%), Gaps = 23/232 (9%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFF-------SDTIISLIMHF 60 + ID P L+Y A ++TL +A S ++ L + F V+ + TI++L+ Sbjct: 1 MFIDYLP-LMYTATLMTLGLAVCSLLLGLALSIFFVVLETHKWACIRKPTATIVTLL--- 56 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-----G--IVFDSFVAIIISLTLNFSAYISEIIRSS 113 RG P ++ +F+I++G+P I G + F +F +++L++ F++Y S+ +R + Sbjct: 57 -----RGLPEILVVFLIYFGVPEILEWVIGEYVEFGAFGCGVVALSIIFASYASQSLRGA 111 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I +IP GQW++ A+GL+R T +I+PQ + LS++++ +LK T++ S I + + Sbjct: 112 IQAIPLGQWESGAALGLSRSYTFIFLIMPQVWRHALPGLSNQWLVLLKDTALVSLIGVHD 171 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + + A+ I + T+QP Y A +YL++T F I K+E VT+ + + Sbjct: 172 LMRQAELINTNTHQPFTWYGFAALLYLLITLFSQFIIRKLERRVTRFERATN 223 >gi|315638556|ref|ZP_07893732.1| His/Glu/Gln/Arg/opine amino acid ABC superfamily ATP binding cassette transporter, permease protein [Campylobacter upsaliensis JV21] gi|315481400|gb|EFU72028.1| His/Glu/Gln/Arg/opine amino acid ABC superfamily ATP binding cassette transporter, permease protein [Campylobacter upsaliensis JV21] Length = 246 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 72/195 (36%), Positives = 111/195 (56%), Gaps = 21/195 (10%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL----FVIF 78 VT+ + + I L+ GF +A+IR F +++ I+ ++ I RGTP+++QL FVIF Sbjct: 53 VTILLTFCAVCIGLVFGFILALIR-FSPFGVLNFIVDEFIDIIRGTPVILQLMIFAFVIF 111 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 L D+ A I++L LN SAYI+EI+RS I S+ KGQ +A+ A+GL + T+R Sbjct: 112 TFL-------DNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYQSTMRE 164 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 IILPQ + L++EFIS+ K TSV I++ +I ++ + + Y P I Sbjct: 165 IILPQALKNILPALANEFISLFKETSVVGFISVVDITMQSKSLQAVLYNPKPI------- 217 Query: 199 YLILTSFCYIIQIKI 213 I T Y + +KI Sbjct: 218 --IFTGLVYYVSVKI 230 >gi|227820381|ref|YP_002824352.1| ABC transporter permease [Sinorhizobium fredii NGR234] gi|227339380|gb|ACP23599.1| putative permease component of ABC transporter [Sinorhizobium fredii NGR234] Length = 219 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 50/146 (34%), Positives = 90/146 (61%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + +Y+ +F+GTPLL+QLF+ F+GL GI +++A ++L L +A++ EI R + + Sbjct: 52 VAKYYIELFQGTPLLMQLFIAFFGLGLFGIDVPAWLAAGLALILWSAAFLGEIWRGCVEA 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I KGQW+AS ++G+ R Q +R++ILPQ + + P + ++K T++ S I E+ + Sbjct: 112 IAKGQWEASASLGMGRLQQMRYVILPQAMRIAVAPTVGFSVQVIKGTALTSIIGFVELSK 171 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLIL 202 + + T+QP +Y +A +Y L Sbjct: 172 AGTVVTNATFQPFTVYGLVALIYFAL 197 >gi|30022233|ref|NP_833864.1| arginine ABC transporter permease [Bacillus cereus ATCC 14579] gi|218233478|ref|YP_002368956.1| amino acid ABC transporter, permease protein [Bacillus cereus B4264] gi|296504643|ref|YP_003666343.1| arginine ABC transporter permease [Bacillus thuringiensis BMB171] gi|29897790|gb|AAP11065.1| Arginine transport system permease protein artQ [Bacillus cereus ATCC 14579] gi|218161435|gb|ACK61427.1| amino acid ABC transporter, permease protein [Bacillus cereus B4264] gi|296325695|gb|ADH08623.1| arginine ABC transporter permease [Bacillus thuringiensis BMB171] Length = 219 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 121/215 (56%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I +S + I+G +A+ +I +++ FY IF Sbjct: 5 FSAITPSIPYIL-KGLEVTLKIVAVSALAGFILGTLLALCKIA-RIRALNIAADFYTSIF 62 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P I G +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 63 RGTPLVLQLMIIYFGVPQIIGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 123 AMALGVPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y +L ++ IE + + Sbjct: 183 TFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKK 217 >gi|320355395|ref|YP_004196734.1| PAAT family amino acid ABC transporter membrane protein [Desulfobulbus propionicus DSM 2032] gi|320123897|gb|ADW19443.1| amino acid ABC transporter membrane protein, PAAT family [Desulfobulbus propionicus DSM 2032] Length = 262 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/168 (33%), Positives = 99/168 (58%), Gaps = 2/168 (1%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I++T + +S ++++IG + R+ + +I+LI YV + RG PLLVQLF I+Y Sbjct: 61 GILITFEVTVLSITLAIVIGLLTGLGRLS-RNRVINLIASLYVEVVRGIPLLVQLFYIYY 119 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 L V D VA +I++ + AY+ E+ R+ I SI GQ +A+ ++G +QT+ ++ Sbjct: 120 ALGRFVRVPD-MVAAVIAMAFCYGAYMGEVFRAGIKSIDFGQTEAALSLGFNHRQTMAYV 178 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 ILPQ T P+ +EFI++LK TS+ S + + +I + + S ++ Sbjct: 179 ILPQAWRTILPPVGNEFIALLKDTSLVSILAVADILRRGREYASESFN 226 >gi|295398059|ref|ZP_06808114.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] gi|294973708|gb|EFG49480.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] Length = 247 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 122/207 (58%), Gaps = 12/207 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++W ++ FP++L +A+ TL I ++ + L++G IA +RI ++S I +V Sbjct: 5 FKW-EYVVSFFPKIL-SALPTTLAIVAVATAVGLVLGLAIAFVRIE-KVPVLSQISQVFV 61 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI------IISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+++YGLP IVF + I I+ LN +A+ SEI RS+I S Sbjct: 62 SFIRGTPILVQLFLVYYGLP---IVFTALANIEKIDYVYITYGLNTAAFFSEIFRSAISS 118 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + Q +A+ ++GLT+ QT R IILPQ + + + +S+L+ TS+A ++ + ++ Sbjct: 119 VATDQKEAAASVGLTKLQTYRRIILPQAVRIAIPATGTMIVSLLQDTSLAFSLGVIDVIG 178 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 + + + TY+ L Y A ++++L+ Sbjct: 179 KVRALAALTYRSLEGYFVAAIIFIVLS 205 >gi|294083905|ref|YP_003550662.1| amino acid ABC transporter permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292663477|gb|ADE38578.1| amino acid ABC transporter permease protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 287 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/232 (32%), Positives = 130/232 (56%), Gaps = 20/232 (8%) Query: 1 MKYEW--------FNLIIDS--FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS 50 M+Y W F +ID P L+ I+VTL +A IS ++S++IG A+ R+ S Sbjct: 59 MEYRWQWYRVGPFFYRMIDGEFIPGPLFKGIIVTLQLAGISSILSIVIGALTAIGRM--S 116 Query: 51 DTIISL-IMHFYVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISE 108 ++I I Y+ I R TPLLVQLF+ ++ L P GI D F A ++ L ++ +E Sbjct: 117 NSIAGRSIASTYLEIIRNTPLLVQLFMFYFVLAPIFGI--DRFWAGVLCLAAFEGSFAAE 174 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 IIR I ++ +GQ++A+ A GL++ R++I+PQ + PL+ IS++K +++ S Sbjct: 175 IIRGGIQAVERGQYEAADATGLSKFDKYRYVIVPQALPLILPPLTGLLISLIKHSAIVSV 234 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS----FCYIIQIKIESS 216 I + E+ ++S TY I+ +A +YL+LT+ I+++K+ + Sbjct: 235 IAVAELTTEGLNLISDTYMAFEIWFIVAGMYLVLTTSLSVMVNILEVKMNRA 286 >gi|50123114|ref|YP_052281.1| amino acid ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49613640|emb|CAG77091.1| probable amino-acid ABC transporter permease protein [Pectobacterium atrosepticum SCRI1043] Length = 223 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 62/183 (33%), Positives = 110/183 (60%), Gaps = 7/183 (3%) Query: 9 IIDSFPQ-LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 ++ FPQ L+Y + TL +A +S ++++G +A++R ++ I+ Y+ +FRG Sbjct: 8 LLKVFPQVLMY--LPTTLFLAVVSMFFAMVLGLILALVRESKI-VVVVKIVELYISLFRG 64 Query: 68 TPLLVQLFVIFYGLPHI--GIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 P LVQLF+I++GLP + G+ D+ A II +L SAY++EI R+ + S+ GQ +A Sbjct: 65 IPSLVQLFIIYFGLPQLFPGLSNLDAMTAAIIGFSLKTSAYMAEIFRAGLASVDFGQTEA 124 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +IG+++ Q R I+LPQ + + + FIS++K TSVA + + E+F + I + Sbjct: 125 GLSIGMSKAQVYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFAEGKMIAAE 184 Query: 185 TYQ 187 + + Sbjct: 185 SLR 187 >gi|289168138|ref|YP_003446407.1| ABC transporter membrane-spanning permease-amino acid transport [Streptococcus mitis B6] gi|288907705|emb|CBJ22542.1| ABC transporter membrane-spanning permease-amino acid transport [Streptococcus mitis B6] Length = 213 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 5/205 (2%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRGTPLL 71 P LL A +TL + + + S+ +G IA +++ + + +++ Y+WI RGTPLL Sbjct: 8 LPSLLSGA-SMTLQVFALVLIFSIPLGVLIAFALQVHWKP--LHHLINIYIWIMRGTPLL 64 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +QL I+Y LP IGI D A II+ LN++AY +EI R I +IPKGQ++A+ + Sbjct: 65 LQLIFIYYVLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKGQYEAAKVLKFN 124 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 T+R+IILPQ + +E +S++K TS+ + I ++ A R + L+ Sbjct: 125 SFDTVRYIILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLI-LASRTAANRDASLVP 183 Query: 192 YCELAFVYLILTSFCYIIQIKIESS 216 + +YLIL I+ K+E Sbjct: 184 MFLVGAIYLILIGIVTILAKKVEKK 208 >gi|227325816|ref|ZP_03829840.1| amino-acid ABC transporter permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 223 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/182 (33%), Positives = 109/182 (59%), Gaps = 5/182 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ FPQ+L + TL +A +S ++++G +A++R ++ I+ Y+ +FRG Sbjct: 8 LLKVFPQVLMY-LPTTLFLAVVSMFFAMVLGLILALVRESKI-VVVVKIVELYISLFRGI 65 Query: 69 PLLVQLFVIFYGLPHI--GIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 P LVQLF+I++GLP + G+ D+ A II +L SAY++EI R+ + S+ GQ +A Sbjct: 66 PSLVQLFIIYFGLPQLFPGLSNLDAMTAAIIGFSLKTSAYMAEIFRAGLASVDFGQTEAG 125 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IG+++ Q R I+LPQ + + + FIS++K TSVA + + E+F + I + + Sbjct: 126 LSIGMSKAQVYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFAEGKMIAAES 185 Query: 186 YQ 187 + Sbjct: 186 LR 187 >gi|194467780|ref|ZP_03073766.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] gi|194452633|gb|EDX41531.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] Length = 503 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 108/184 (58%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I TL I +S + ++G A++R+ + + I Y+ RGTP++VQ+ +++ Sbjct: 303 GIKYTLIITVVSVIFGFLLGTLFALMRLS-KNKFLHSIAVCYIEFLRGTPMMVQIMFVYF 361 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G+ I + +A II+++LN AY++EIIRS I SIP GQ +A+ ++G+++ +T R++ Sbjct: 362 GIGAIIQSLPALLAGIIAVSLNSGAYVAEIIRSGIQSIPLGQTEAARSLGMSKNETFRYV 421 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I+PQ + L +E I++LK +S+ S I + E+ Q + S TY+ ++ +Y Sbjct: 422 IMPQALKNIWPALGNELITLLKDSSLVSVIGVSELMYQTQLVQSATYKGVLPLFITMIIY 481 Query: 200 LILT 203 ILT Sbjct: 482 FILT 485 >gi|323485584|ref|ZP_08090928.1| hypothetical protein HMPREF9474_02679 [Clostridium symbiosum WAL-14163] gi|323692932|ref|ZP_08107154.1| hypothetical protein HMPREF9475_02017 [Clostridium symbiosum WAL-14673] gi|323401102|gb|EGA93456.1| hypothetical protein HMPREF9474_02679 [Clostridium symbiosum WAL-14163] gi|323503015|gb|EGB18855.1| hypothetical protein HMPREF9475_02017 [Clostridium symbiosum WAL-14673] Length = 230 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 113/207 (54%), Gaps = 15/207 (7%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHF 60 +FN I L + +TL + ++ ++ ++IG + VIR + T I++ I + Sbjct: 10 YFNFIEKDRWLYLVDGLKITLTVTLLAVILGIVIGLIVGVIRSTYEKTHKLKILNFICNL 69 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVF-----DSFVAIIISLTLNFSAYISEIIRSSII 115 Y+ + RGTP++VQL +I+Y ++F D +++ +N AY++EI RS I+ Sbjct: 70 YLTVIRGTPVVVQLMIIYY------VIFGSLRVDKVPVAVLAFGINSGAYVAEIFRSGIM 123 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SI GQ++A ++G QT+ +II+PQ L +EFIS+LK TSVA I + ++ Sbjct: 124 SIDNGQFEAGRSLGFNYPQTMWYIIMPQAFKNILPALCNEFISLLKETSVAGFIALQDLT 183 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLIL 202 + I S TY + +A +YLI+ Sbjct: 184 KGGDIIRSITYSATMPLLAVAAIYLII 210 >gi|269960967|ref|ZP_06175336.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3] gi|269834186|gb|EEZ88276.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3] Length = 225 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 120/215 (55%), Gaps = 10/215 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LII+SFP L + T+ + ++ VI L + +A+ R ++ +SL +++ F Sbjct: 3 FSLIIESFPVYL-DGLWTTVWLVALALVIGLCVSIPLAIARNS-TNYALSLPSWAFIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQFFPVKDTLWEHAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G+++ T R IILP + + S+E I +L ++VA ITI ++ A+ Sbjct: 121 EVEAAKAYGMSKFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIITIMDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT---SFCYIIQIK 212 + S Y P + Y+ LT +C+ I K Sbjct: 181 VNSRYYAPFESFLTAGLFYMALTFIILWCFKIAEK 215 >gi|222082232|ref|YP_002541597.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726911|gb|ACM30000.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 319 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 116/215 (53%), Gaps = 21/215 (9%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + V+L + ++ +++G +AV R+ D + + + ++W FRGTPLLVQL + + Sbjct: 71 SGLYVSLGLTVVAMAFGIVLGLLLAVARLS-KDRLANSLASLFIWFFRGTPLLVQL-IFW 128 Query: 79 YGLP------HIGIVFDS-------------FVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y L IGI F A I L LN +AY++EIIR ++S+ K Sbjct: 129 YNLSTLFPTLSIGIPFGPTFMSWDTNSVISPMTAAIAGLALNEAAYMAEIIRGGLLSVDK 188 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++ + A G+TR + + II+PQ + + P ++ IS++K+TS+ S I + ++ + Q Sbjct: 189 GQFETAEAFGMTRARALSRIIIPQAMRSIVPPTGNQLISMIKATSLVSVIAMADLLYSVQ 248 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I + T++ + + YL++TS + Q IE Sbjct: 249 SIYNRTFEVVPMLLVAVIWYLLITSVLNVGQSYIE 283 >gi|172040836|ref|YP_001800550.1| putative ABC transport system, permease protein [Corynebacterium urealyticum DSM 7109] gi|171852140|emb|CAQ05116.1| putative ABC transport system, permease protein [Corynebacterium urealyticum DSM 7109] Length = 325 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 121/209 (57%), Gaps = 23/209 (11%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-- 81 TL + ++ ++ + +G IAV+R+ + ++ + ++W+FRGTP+ VQL +F+GL Sbjct: 79 TLLLTVLAMILGVALGSIIAVLRMS-PNGVLRGVSWLFLWVFRGTPVYVQL--MFWGLLG 135 Query: 82 -----PHIGI--------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +IGI + + F +I L LN +AY++EI+R+ I ++P+GQ +AS A+ Sbjct: 136 SIYQVVNIGIAEIDMQDFLSNMFWLAVIGLGLNEAAYMAEIVRAGIQAVPEGQSEASKAL 195 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP---EIFQTAQRIVSTT 185 G+T Q +R +LPQ + P +E IS+LK+TS+ I +P E+F A I ++ Sbjct: 196 GMTWWQNMRRTVLPQAMRIIIPPTGNELISMLKTTSL--VIVVPYSGELFGKATDISNSI 253 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIE 214 +QP+ + A YL++TS + Q +E Sbjct: 254 FQPVPLLLVAASWYLVITSVLMVGQHYLE 282 >gi|145299600|ref|YP_001142441.1| ABC-type histidine/lysine/arginine/ornithine transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142852372|gb|ABO90693.1| ABC-type histidine/lysine/arginine/ornithine transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 230 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 66/224 (29%), Positives = 121/224 (54%), Gaps = 11/224 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I+ +P + + T+ + S ++ L + + ++R + +I + Y++ F Sbjct: 3 FSIILKEWPTY-WQGLYTTVLLVAASLILGLALAVPMGILRNS-RNWLIKGPIWAYIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+I+YG + +S + +++ TLN AY +EI+R ++++ Sbjct: 61 RGTPLLVQLFIIYYGAAQWEWLKNSAAWTLFAEAWFCALLAFTLNTGAYTAEIVRGAVLN 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +PKGQ +A+ A G++R QT+ IILP + + S+E I +L+ ++VA ITI ++ Sbjct: 121 MPKGQIEAANAFGMSRWQTLTRIILPNSFRRALPAYSNEVIFMLQGSAVAGIITIVDLTG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 A+ I S Y P + +Y++LT + K E+ H Sbjct: 181 AARIINSRYYSPFEAFLTAGLLYMLLTFVIVWLFKKWEARWHAH 224 >gi|325970768|ref|YP_004246959.1| polar amino acid ABC transporter inner membrane subunit [Spirochaeta sp. Buddy] gi|324026006|gb|ADY12765.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta sp. Buddy] Length = 211 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 51/153 (33%), Positives = 93/153 (60%), Gaps = 1/153 (0%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISE 108 + IIS +++ Y+ I RGTPL++QL +++ +I G +D F A+I+ +N++AY +E Sbjct: 40 KNPIISNMVNIYIMIMRGTPLILQLLFVYFAPYYIFGASYDRFTAVIVGFVINYAAYFAE 99 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I R I SIP GQ++AS +G ++ T H++ PQ + + +E I+++K T++A T Sbjct: 100 IYRGGIQSIPIGQYEASLVLGFSKTHTFTHVVAPQVVKRIIPAMGNEVITLVKDTALAQT 159 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 I + E+F+ AQ + + + I+ F +L+ Sbjct: 160 IGVAELFRVAQNASARQFSTMPIFIAGVFYFLM 192 >gi|329942893|ref|ZP_08291672.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Chlamydophila psittaci Cal10] gi|332287486|ref|YP_004422387.1| amino ABC transporter, permease protein [Chlamydophila psittaci 6BC] gi|313848065|emb|CBY17063.1| ABC transporter, membrane permease [Chlamydophila psittaci RD1] gi|325507119|gb|ADZ18757.1| amino ABC transporter, permease protein [Chlamydophila psittaci 6BC] gi|328815153|gb|EGF85142.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Chlamydophila psittaci Cal10] gi|328914734|gb|AEB55567.1| amino acid ABC transporter, permease protein [Chlamydophila psittaci 6BC] Length = 215 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/197 (32%), Positives = 114/197 (57%), Gaps = 8/197 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 Y V + I C SF + LIIG + +F I + + YV + RGTPL +Q+ + Sbjct: 17 YTLFVSGISILCGSF-LGLIIGTMTSR---YFPCRITRWLGNLYVTVIRGTPLFIQILIF 72 Query: 78 FYGLPHIGIVFDS--FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 ++GLP I I D +A +I+L++N SAY++E IR I ++ GQW+++ +G + Q Sbjct: 73 YFGLPSI-IRLDPTPLMAGLIALSINSSAYLAENIRGGINALSVGQWESAKVLGYKKSQI 131 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +II PQ L++EF++++K +S+ + +PE+ + ++ IVS P+ +Y Sbjct: 132 FFYIIYPQVFKNILPSLTNEFVALIKESSILMVVGVPELTKVSKDIVSRELNPMEMYSIC 191 Query: 196 AFVYLILTS-FCYIIQI 211 A +YL++TS F Y+ ++ Sbjct: 192 AALYLLMTSLFSYVARL 208 >gi|330444606|ref|YP_004377592.1| amino acid ABC transporter permease [Chlamydophila pecorum E58] gi|328807716|gb|AEB41889.1| amino acid ABC transporter, permease protein [Chlamydophila pecorum E58] Length = 204 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 120/208 (57%), Gaps = 8/208 (3%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F LY + ++ I C SF + ++IG + + S I ++ + YV + RGTPL + Sbjct: 2 FHGCLYTLGISSVAILCGSF-LGVVIGTGTSR---YSSCRIFRILGNSYVTVIRGTPLFI 57 Query: 73 QLFVIFYGLPHIGIVFDS--FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 Q+ +I++GLP + I D +A I++LT+N +AY++E IR I +I GQW+++ +G Sbjct: 58 QILIIYFGLPSV-ICLDPSPLMAGIMALTINSAAYLAENIRGGINAISVGQWESAKVLGY 116 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 QT +I+ PQ L +EFI+++K +S+ + IPE+ + ++ IVS P+ Sbjct: 117 RPYQTFLYILYPQVFRNVLPSLMNEFIALIKESSILMVVGIPELTKVSKDIVSRELNPME 176 Query: 191 IYCELAFVYLILTS-FCYIIQIKIESSV 217 +Y A +YL++T+ F YI ++ E V Sbjct: 177 MYSICAALYLMMTTVFSYIARVFEEKKV 204 >gi|320353111|ref|YP_004194450.1| PAAT family amino acid ABC transporter membrane protein 2 [Desulfobulbus propionicus DSM 2032] gi|320121613|gb|ADW17159.1| amino acid ABC transporter membrane protein 2, PAAT family [Desulfobulbus propionicus DSM 2032] Length = 222 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 116/214 (54%), Gaps = 5/214 (2%) Query: 8 LIIDSFPQLLYAAI----VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 L + F Q L AA+ V++L + S V ++IG +R+F + + Y Sbjct: 2 LTLSPFYQELLAALNRGLVMSLALIVPSAVGGVVIGISAGALRVF-GARWLRWLGDGYAA 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 +FRGTPL+VQLFV+++GLP++G+ + A +I L AY SE +R +++SI +GQ+ Sbjct: 61 LFRGTPLVVQLFVLYFGLPNLGLYLSPYAAAVIGFVLCSGAYQSEYVRGALLSIKRGQYL 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 + A+G T QT+R II+PQ + + +E I ++K +S+A +T E+ + + + Sbjct: 121 GAQALGFTGWQTVRWIIVPQAVRRAIHGCGNEIIYLIKYSSLAYIVTCMELTGEGKTVAT 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 ++ ++ + YL L + + +IE + Sbjct: 181 EYFRFTEVFAIIGLYYLGLVTLAIFVLKRIEQRL 214 >gi|313897815|ref|ZP_07831356.1| arginine ABC transporter, permease protein ArtQ [Clostridium sp. HGF2] gi|312957350|gb|EFR38977.1| arginine ABC transporter, permease protein ArtQ [Clostridium sp. HGF2] Length = 218 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 120/215 (55%), Gaps = 10/215 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I+ F QLL + + V L ++ S +IG +R + + +LI+ Y+ +FRGT Sbjct: 7 VIERFWQLLLSGVPVILGLSLASAFFGTLIGLATVFLRRM--NKVFNLIVAAYIDLFRGT 64 Query: 69 PLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P+ VQ+F I++G+P + G+ +++VA I+ +LN AY+SEI+R+ I I KGQ +A+ Sbjct: 65 PVYVQMFFIYFGIPSLVPGLNINNWVAGILVFSLNSGAYMSEIMRAGIDGIDKGQIEAAK 124 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI---FQTAQRIVS 183 A+G++ K + II+PQ + +EFI++ K TS+ S I + ++ F + Sbjct: 125 ALGVSGKDIGKDIIIPQAFRNVLPAVINEFITLTKETSIVSVIGLHDMMYWFYAVKNQTY 184 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 ++PL+I + VY I+ +I IE + Sbjct: 185 ADFEPLLI---VFLVYYIMNKVLSLIGKAIERKLK 216 >gi|270292830|ref|ZP_06199041.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] gi|270278809|gb|EFA24655.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] Length = 229 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 116/208 (55%), Gaps = 5/208 (2%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL A +TL + + + S+ +G IA +++ + ++ +++ Y+WI RGTPLL+ Sbjct: 25 PSLLSGA-SMTLQVFVLVLIFSIPLGVLIAFALQVHWK--LLHYLINIYIWIMRGTPLLL 81 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QL I+Y LP+IGI D A II+ LN++AY +EI R I +IPKGQ++A+ + + Sbjct: 82 QLIFIYYVLPNIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKGQYEAAKVLKFSP 141 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 T+R+IILPQ + +E +S++K TS+ + I ++ A R + L+ Sbjct: 142 FATVRYIILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLI-LASRTAANRDASLVPM 200 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQH 220 +YLIL I+ K+E + + Sbjct: 201 FLAGAIYLILIGIVTILAKKVEKKYSYY 228 >gi|218457946|ref|ZP_03498037.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli Kim 5] Length = 161 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 52/139 (37%), Positives = 92/139 (66%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 +F+GTPLL+QLFV++YG+ +GI ++++A+ I+ TL+ SA++ EI R SI ++PKGQ + Sbjct: 3 LFQGTPLLMQLFVVYYGVALLGIDVNAWLAVAIAFTLHASAFLGEIWRGSIEAVPKGQSE 62 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GL +R +ILPQ + S + ++K TS+A+ + E+ + Q I + Sbjct: 63 AANALGLHYVSRMRDVILPQALKISMPATIGFLVQLIKGTSLAAIVGFIELTRAGQIISN 122 Query: 184 TTYQPLIIYCELAFVYLIL 202 TY+PL+++ + +Y I+ Sbjct: 123 QTYRPLLVFGVVGVIYFII 141 >gi|239834534|ref|ZP_04682862.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239822597|gb|EEQ94166.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 220 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 118/213 (55%), Gaps = 3/213 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + +L +T+ + + + +G IA+++ + +S ++ Y+ I RGT Sbjct: 5 ILEQYWPILSNGFALTILCWALGTLFGMALGLVIALVQ-RYGPRPVSWLIQAYIEIIRGT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P LVQLFV++YG P IG+ ++ A ++ LT+ S Y +EI R+ +++P GQ +A+ AI Sbjct: 64 PFLVQLFVLYYGGPLIGLRLEALTAGLVGLTVYGSPYFAEIFRAGFLAVPAGQLEAARAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISIL-KSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++ +R I+LP + SA+P F IL K T + S IT+PE+ + QR+ + T++ Sbjct: 124 GMSEPTIVRRILLPLGL-VSALPALVNFSIILTKETVILSIITVPELMYSVQRMSTETFR 182 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 L LA + L +E+ +T+H Sbjct: 183 YLEANLVLALFFWALVETISRAGRWLEARITKH 215 >gi|218283465|ref|ZP_03489465.1| hypothetical protein EUBIFOR_02055 [Eubacterium biforme DSM 3989] gi|218215847|gb|EEC89385.1| hypothetical protein EUBIFOR_02055 [Eubacterium biforme DSM 3989] Length = 240 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/213 (30%), Positives = 117/213 (54%), Gaps = 15/213 (7%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF----FSDTIISLIMH-- 59 +N+ + + P Y I +TL A + ++G + IR + T+I ++ + Sbjct: 9 WNIFVRNIPLFQYG-IEMTLLFAFVGTFAGFVVGLLVGGIRAIEINEYDSTVIKVLKNIG 67 Query: 60 -----FYVWIFRGTPLLVQLFVIFY-GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 Y+WIFRGTP++VQ I+Y G P IG + A +I +++N AY++EIIRS Sbjct: 68 RIITGLYIWIFRGTPMMVQAMFIYYAGKPVIG--WTPITAGLIIISINTGAYMAEIIRSG 125 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I S+ KGQ +A+ ++G+T QT+ +++ PQ I S + ++ I +K +S+ + IT+ E Sbjct: 126 IQSVDKGQNEAAMSLGMTTMQTLMYVVFPQAIKNSFPSIGNQLIVNIKDSSMLNVITVTE 185 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFC 206 ++ + + Y+ + + A +YLILT+ Sbjct: 186 LYFQTTSVAGSNYRVMETFLVSAILYLILTTLA 218 >gi|224542318|ref|ZP_03682857.1| hypothetical protein CATMIT_01497 [Catenibacterium mitsuokai DSM 15897] gi|224524767|gb|EEF93872.1| hypothetical protein CATMIT_01497 [Catenibacterium mitsuokai DSM 15897] Length = 229 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/158 (37%), Positives = 94/158 (59%), Gaps = 7/158 (4%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVF--DSFVAIIISLTLNFSAY 105 ++ I + YV IFRGTP+L+Q+ ++ +P + G F D +V +I+++LN AY Sbjct: 54 VLRAIGNVYVEIFRGTPMLLQIMFLYLAVPTVVQSITGQRFQADPYVCGLIAMSLNSGAY 113 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 E+IRS I+ + KGQW+A IGL QT+R++ILPQ PL SEFI+++K +S+ Sbjct: 114 QVELIRSGILGVDKGQWEACETIGLNYVQTMRYVILPQAFKRIIPPLISEFITLIKDSSL 173 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 TI E+ TA I + T+ L+ +YL++T Sbjct: 174 IFTIGAVELLATASVIGANTFNYLVPLTATGAIYLVMT 211 >gi|222080908|ref|YP_002540271.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725587|gb|ACM28676.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 238 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 113/209 (54%), Gaps = 12/209 (5%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVI-----RIFFSDTIISLIMHFYVWIFRGT 68 P + A V+TL I +S +I+G IA++ R + T++ Y+W+FRGT Sbjct: 13 PAFFHGA-VLTLLITIVSLFFGIIVGLVIALLQETELRAVKAATLV------YLWLFRGT 65 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P+L Q+ I+ LP GI + ++ +++L+LN AY++EI+RS + ++ KGQ A A+ Sbjct: 66 PVLFQIIFIYNVLPGFGIRLSAILSAVLALSLNEGAYMAEILRSGLHAVKKGQRTAGLAL 125 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+TR +R +++PQ + ++ I +LK++++ S + + E+ A + S ++ Sbjct: 126 GMTRASVMRFVVMPQAARIVLPAVGNQMIGMLKTSALVSVVAVEELLLVANQTASANFRY 185 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSV 217 YL LT+ + Q +E S+ Sbjct: 186 FEALSAAGIYYLALTTIFMVFQSILERSL 214 >gi|319407362|emb|CBI81009.1| ABC transporter, permease protein [Bartonella sp. 1-1C] Length = 235 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/222 (31%), Positives = 123/222 (55%), Gaps = 12/222 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ + L+ +VTL + IS I L++G I IR+ ++ + + Y++ FR + Sbjct: 14 LLNRYSLKLFDGFIVTLKLVSISCSIGLLLGILITFIRLS-NNKPLQYLARAYIYFFRSS 72 Query: 69 PLLVQLFVIFYGLP-------HIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLL QLF+ +YGL IG+ + +++ + +LN +AY +EI R S++++ Sbjct: 73 PLLAQLFLFYYGLGSLSSFWQQIGLWWFFQNAWYCCLFIFSLNSAAYQAEIFRGSLLAVA 132 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 Q +AS A+GL R II PQ + + PL +EFI + KS+++AS +T+ ++ T Sbjct: 133 AEQREASKALGLNRSTIFFKIIFPQAMVVALRPLGNEFILMTKSSAIASLVTVYDLMGTT 192 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + I S T+ +Y A +YLI+ + I I IE +T++ Sbjct: 193 KLIYSRTFD-FQVYVWAAIIYLIIVELIHRIIILIEHYLTRY 233 >gi|226314897|ref|YP_002774793.1| amino acid ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226097847|dbj|BAH46289.1| probable amino acid ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 234 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 121/212 (57%), Gaps = 9/212 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I + +L I+ T+ + ++ V +G FI++ ++ S I+ YV +FRGT Sbjct: 15 VIYDYRELFIRGIMNTILLTAVATVCGTFLGLFISLGKMS-SKRILRWTCSIYVELFRGT 73 Query: 69 PLLVQLFVIFYG-LPHI-GIVF------DSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 P+LVQ+ +I + +P I GI++ ++ + ++L+LN +AY++EI R+ I SI G Sbjct: 74 PMLVQILLIHFAVIPSIWGILYPGASSPEAIYSGFVALSLNAAAYMAEIFRAGIQSIDPG 133 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++G+ + +R IILPQ T + +EFI++LK +S+ + I PE+ A Sbjct: 134 QMEAARSLGMNKGLAMRQIILPQAFTRMLPAIGNEFIALLKDSSLLAVIATPELNYAAMN 193 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIK 212 + +T++ Y A VYL+LT F I ++ Sbjct: 194 VAKSTFERYPPYLTEAAVYLVLTLFLSRIVVR 225 >gi|239908613|ref|YP_002955355.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] gi|239798480|dbj|BAH77469.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] Length = 266 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 108/187 (57%), Gaps = 1/187 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++Y W + ++ + + +TL ++ ++ + L G + + + ++S + Sbjct: 42 LRYHWDWSAVWAYRSIFLDGLGLTLAVSVVAITLGLCFGLLSGLASVS-GNLVLSELAAL 100 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV FRGTPLLVQ+ + ++ + + V FV +L+L AYISE++R+ + S+ G Sbjct: 101 YVGAFRGTPLLVQILIFYFCVGVVVRVDSPFVIGTFTLSLFSGAYISEMVRAGVESVDHG 160 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ + G+TR Q + H++LPQ P++ +F+S +K +S+ S I++ E+ + A+ Sbjct: 161 QWEAAMSSGMTRGQALLHVVLPQAARRIVAPVTGQFVSCIKDSSLLSVISLRELTKAAEV 220 Query: 181 IVSTTYQ 187 + ++TY+ Sbjct: 221 VNASTYR 227 >gi|191639757|ref|YP_001988923.1| ArpJ protein [Lactobacillus casei BL23] gi|190714059|emb|CAQ68065.1| ArpJ protein [Lactobacillus casei BL23] gi|327383870|gb|AEA55346.1| Amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus casei LC2W] gi|327387051|gb|AEA58525.1| Amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus casei BD-II] Length = 482 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/180 (32%), Positives = 103/180 (57%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL A ++ +IG +A++++ S I + Y+ RGTPLLVQ F++F+G Sbjct: 289 TLIFAVLTVFFGTVIGTLLALMKLSHS-WFAKAIANVYIEFIRGTPLLVQAFIVFFGTQI 347 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ +FVA I++ +N AY++EIIR I S+P GQ +A+ ++GL + Q +R++ILPQ Sbjct: 348 LGLDLSAFVAGAIAMAINSGAYVAEIIRGGINSVPIGQTEAARSLGLHQGQAMRYVILPQ 407 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +EF++ +K +SV S I E+ + +++P + + +Y I+T Sbjct: 408 ATKNIWPALGNEFVTDIKESSVLSVIGATELMFEGTVVQGASFKPFLPLVVVVILYFIMT 467 >gi|323142250|ref|ZP_08077084.1| arginine ABC transporter, permease protein ArtQ [Phascolarctobacterium sp. YIT 12067] gi|322413313|gb|EFY04198.1| arginine ABC transporter, permease protein ArtQ [Phascolarctobacterium sp. YIT 12067] Length = 218 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 111/195 (56%), Gaps = 2/195 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ + LL A+ +TL S ++ GF +A+I + + ++S + Y+ +FRGT Sbjct: 6 VLEPYIPLLATAVWITLKFTFFSTIMGFFGGFILALITLS-KNRVLSFLAKIYISVFRGT 64 Query: 69 PLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PLLVQL +I++ P + + A ++S LN +AYISE +R I+++ KGQW+ + + Sbjct: 65 PLLVQLMLIYFATPQLTSYTISALEAGVLSFGLNSAAYISEALRGGILAVDKGQWEGAMS 124 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ + + + IILPQ I + L +E I +LK +S+ S I + + + A I + T++ Sbjct: 125 LGVPKHRFLLDIILPQAIKNALPSLVNESIMLLKDSSLVSVIGVADTLRWADLIQAKTFR 184 Query: 188 PLIIYCELAFVYLIL 202 + A VY +L Sbjct: 185 AFEAFIVAAAVYYVL 199 >gi|255284289|ref|ZP_05348844.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Bryantella formatexigens DSM 14469] gi|255265183|gb|EET58388.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Bryantella formatexigens DSM 14469] Length = 223 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 104/175 (59%), Gaps = 8/175 (4%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-------GIV 87 ++IIG +A+ + + +++LI +V RG PL+V + +++G+P G Sbjct: 30 AMIIGLIVALFNVG-KNRVLNLIGTIFVDAVRGVPLIVLAYFVYFGVPQAAKMMNVSGFR 88 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + A II+L++N AY++EIIR+ I S+ KGQ +AS ++GL+ +++R II+PQ I T Sbjct: 89 LSALTAGIIALSMNCGAYMAEIIRAGIESVDKGQMEASRSLGLSYGKSMRLIIIPQAIRT 148 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + ++FI LK TS+ S I PE+ TA+ + T+ L ++ + +Y+++ Sbjct: 149 MIPSIINQFIITLKDTSILSVIGFPELVNTAKNVAGNTFMNLQVWAIVGVMYMVV 203 >gi|315640932|ref|ZP_07896028.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] gi|315483350|gb|EFU73850.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] Length = 269 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 71/208 (34%), Positives = 124/208 (59%), Gaps = 10/208 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W L+ FP++L +A+ VTL I I+ ++ L++G IA IR+ I++ + +V Sbjct: 22 FNW-ELVYQYFPKIL-SALPVTLMIVVIATLVGLVLGSIIAFIRVE-KIPILTQLSAIFV 78 Query: 63 WIFRGTPLLVQLFVIFYGLP----HIGIVFDSFVAII---ISLTLNFSAYISEIIRSSII 115 RGTP+LVQL+V++YG+P + I S+ I I+ LN +A+ SE IR++I+ Sbjct: 79 SFIRGTPILVQLYVVYYGVPTLLEAVNIDVSSWNKIFFIYITYGLNTAAFQSETIRAAIL 138 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+P Q +A+ A GLTR Q+ R +ILPQ + + + +++L+ TS+A TI + ++ Sbjct: 139 SVPATQKEAAIACGLTRVQSYRKVILPQMVRVALPSFGTTTVALLQDTSLAFTIGVIDVV 198 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I + T+ L Y A ++++L+ Sbjct: 199 GKAKAIGAVTFHTLEGYVGAAVIFIVLS 226 >gi|325978020|ref|YP_004287736.1| inner membrane amino-acid ABC transporter permease yecS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177948|emb|CBZ47992.1| Inner membrane amino-acid ABC transporter permease protein yecS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 517 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 116/210 (55%), Gaps = 16/210 (7%) Query: 8 LIID---SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMHFYVW 63 ++ID ++ + ++T+ ++ +S +++L++G + R+ SD + IS + Y+ Sbjct: 1 MVIDFLQNYGSFILDGALMTVFLSVVSMILALVLGGVVTAARM--SDNLLISGLTKLYIE 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIG----------IVFDSFVAIIISLTLNFSAYISEIIRSS 113 + RG P+LV L + FYGLP +G + D ++ +I LT+ S +++EI RS Sbjct: 59 VVRGLPMLVILSLFFYGLPELGFNVPDGSLFGVDLDRLISALIGLTVGESVFVAEIYRSG 118 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++ GQ++ + +IG + QT R++I+PQ L +EF + +KS+S AS I + + Sbjct: 119 IQAVDSGQFEGARSIGFNKFQTYRYVIIPQAFKNILPTLGNEFANNIKSSSQASVIGVAD 178 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + TA I +Y+P + VYL+ T Sbjct: 179 LMFTASTIQGISYKPFQAVIAVGIVYLLFT 208 >gi|307705125|ref|ZP_07642002.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK597] gi|307621321|gb|EFO00381.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK597] Length = 213 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 113/205 (55%), Gaps = 5/205 (2%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRGTPLL 71 P LL A +TL + + + S+ +G IA +++ + ++ +++ Y+WI RGTPLL Sbjct: 8 LPSLLSGA-SMTLQVFALVLIFSIPLGVLIAFALQVHWK--LLHHLINIYIWIMRGTPLL 64 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +QL I+Y LP IGI D A II+ LN++AY +EI R I +IPKGQ++A+ + + Sbjct: 65 LQLIFIYYVLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKGQYEAAKVLKFS 124 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 T+R+IILPQ + +E +S++K TS+ + I ++ A R + L+ Sbjct: 125 PFDTVRYIILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLI-LASRTAANRDASLVP 183 Query: 192 YCELAFVYLILTSFCYIIQIKIESS 216 +YLIL I+ K+E Sbjct: 184 MFLAGAIYLILIGIVTILAKKVEKK 208 >gi|218674961|ref|ZP_03524630.1| probable amino acid ABC transporter, permease protein [Rhizobium etli GR56] Length = 219 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 114/204 (55%), Gaps = 11/204 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ +SF+ +G + +RI + + +Y+ +F+GTPLL+QLF+ F+GL Sbjct: 20 TILLSLVSFIGGGAVGLVLLFLRIS-KNKAFRIFAKYYIELFQGTPLLMQLFIAFFGLGL 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 GI +++A ++L L +A+++EI R + S+ +GQW+AS ++ + R Q +R++ILPQ Sbjct: 79 FGIDVPAWLAAGLALILWTAAFLAEIWRGCVESVARGQWEASASLAMGRLQQMRYVILPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + I+K T++ S I E+ + + + T+QP +Y +A +Y L Sbjct: 139 ALRVAIPPTVGFSVQIVKGTALTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFAL- 197 Query: 204 SFCY-------IIQIKIESSVTQH 220 C+ I++ K+ + H Sbjct: 198 --CWPLSKSSQILERKLNVAHRNH 219 >gi|302393017|ref|YP_003828837.1| amino acid ABC transporter membrane protein, PAAT family [Acetohalobium arabaticum DSM 5501] gi|302205094|gb|ADL13772.1| amino acid ABC transporter membrane protein, PAAT family [Acetohalobium arabaticum DSM 5501] Length = 222 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 119/215 (55%), Gaps = 11/215 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI---MHFYV 62 F+ ++ FP L+ + +TL ++ ++SL+ G IA+I T + ++ YV Sbjct: 6 FDFALNLFP-LMLKRLNITLGMS----LLSLLFGIIIAIIIAIIIQTKVKILYPLTKVYV 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FRGTPL+ QLF +++GLP + V F I+ L+LN AY+SE IR +I S+ K Sbjct: 61 SFFRGTPLITQLFFLYFGLPQLIPVLKEASGFTIAIMGLSLNSGAYMSEAIRGAISSVEK 120 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ ++G+T Q ++ IILPQ + LS+ FI+I+K T++ TI + E+ TAQ Sbjct: 121 GQMEAALSVGMTYLQAMKRIILPQAARVAIPALSNSFINIIKGTALTFTIGVTEVMATAQ 180 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + Y+ + + +Y + +Q K+E Sbjct: 181 MEGAAAYRYFEAFTNVIIIYWGIVQLFSYLQKKLE 215 >gi|288905048|ref|YP_003430270.1| amino acid ABC transporter amino acid-binding/permease protein [Streptococcus gallolyticus UCN34] gi|288731774|emb|CBI13337.1| putative amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus gallolyticus UCN34] Length = 517 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 116/210 (55%), Gaps = 16/210 (7%) Query: 8 LIID---SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMHFYVW 63 ++ID ++ + ++T+ ++ +S +++L++G + R+ SD + IS + Y+ Sbjct: 1 MVIDFLQNYGSFILDGALMTVFLSVVSMILALVLGGVVTAARM--SDNLLISGLTKLYIE 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIG----------IVFDSFVAIIISLTLNFSAYISEIIRSS 113 + RG P+LV L + FYGLP +G + D ++ +I LT+ S +++EI RS Sbjct: 59 VVRGLPMLVILSLFFYGLPELGFNVPDGSLFGVDLDRLISALIGLTVGESVFVAEIYRSG 118 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++ GQ++ + +IG + QT R++I+PQ L +EF + +KS+S AS I + + Sbjct: 119 IQAVDSGQFEGARSIGFNKFQTYRYVIIPQAFKNILPTLGNEFANNIKSSSQASVIGVAD 178 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + TA I +Y+P + VYL+ T Sbjct: 179 LMFTASTIQGISYKPFQAVIAVGIVYLLFT 208 >gi|229061835|ref|ZP_04199166.1| Arginine transport system permease protein artQ [Bacillus cereus AH603] gi|228717444|gb|EEL69111.1| Arginine transport system permease protein artQ [Bacillus cereus AH603] Length = 219 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 121/215 (56%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I S V+ I+G +A+ +I ++++ Y IF Sbjct: 5 FSAITPSIPYIL-KGLEVTLKIVAASAVVGFILGTLLALCKIA-RIRVLNIAADIYTSIF 62 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P + G +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 63 RGTPLVLQLMIIYFGVPQMMGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 123 AMALGIPYSKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y IL ++ IE + + Sbjct: 183 TFKYLEPLLFVGLIYYILVIILTLVGKAIEGRMKK 217 >gi|227833204|ref|YP_002834911.1| putative ABC transport system, permease protein [Corynebacterium aurimucosum ATCC 700975] gi|227454220|gb|ACP32973.1| putative ABC transport system, permease protein [Corynebacterium aurimucosum ATCC 700975] Length = 292 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/223 (30%), Positives = 126/223 (56%), Gaps = 27/223 (12%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A + T+ I ++ +I ++ G +AV+R+ + ++ + ++W+FRGTP+ VQL +F+ Sbjct: 47 AALHTIAITILAMIIGVVGGAALAVMRMS-PNPVLGGVSWVFLWLFRGTPIYVQL--VFW 103 Query: 80 GLP-------HIG--------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 GL ++G ++ ++F+ ++ L LN +AY++EI+RS I S+P+GQ +A Sbjct: 104 GLLSALYQSINLGFTEISLTEVLNNAFLLSVLGLGLNEAAYMAEIVRSGISSVPEGQKEA 163 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP---EIFQTAQRI 181 S A+G+ T+R +LPQ + P +EFIS+LK++S+ + IP EIF A I Sbjct: 164 SKALGMGWWMTMRRTVLPQAMRIIIPPTGNEFISLLKTSSL--VVAIPYTAEIFGRATDI 221 Query: 182 VSTTYQPLIIYCELAFVYLILTSFC----YIIQIKIESSVTQH 220 + ++P+ + A YL +TS Y ++ + E T+ Sbjct: 222 SAALFEPIPLLMVAATWYLAITSLLMVGQYFLERRFERGATRE 264 >gi|307709175|ref|ZP_07645634.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK564] gi|307620121|gb|EFN99238.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK564] Length = 213 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 113/205 (55%), Gaps = 5/205 (2%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRGTPLL 71 P LL A +TL + + + S+ +G IA +++ + ++ +++ Y+WI RGTPLL Sbjct: 8 LPSLLSGA-SMTLQVFVLVLIFSIPLGVLIAFALQVHWK--LLHHLINIYIWIMRGTPLL 64 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +QL I+Y LP IGI D A II+ LN++AY +EI R I +IPKGQ++A+ + T Sbjct: 65 LQLIFIYYVLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKGQYEAAKVLKFT 124 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 T+R+IILPQ + +E +S++K TS+ + I ++ A R + L+ Sbjct: 125 PFATVRYIILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLI-LASRTAANRDASLVP 183 Query: 192 YCELAFVYLILTSFCYIIQIKIESS 216 +YLIL I+ K+E Sbjct: 184 MFLAGAIYLILIGIVTILAKKVEKK 208 >gi|114321289|ref|YP_742972.1| polar amino acid ABC transporter, inner membrane subunit [Alkalilimnicola ehrlichii MLHE-1] gi|114227683|gb|ABI57482.1| L-glutamine ABC transporter membrane protein [Alkalilimnicola ehrlichii MLHE-1] Length = 218 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 118/218 (54%), Gaps = 4/218 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M++ W +++ID+ PQ+L A + L+ + + + F +I+ I+ Sbjct: 1 MEFRW-DVVIDAMPQMLAGAQLTAYITLLGIGGGLLLG--TLCGLILAFRIPVINWIVFA 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + RGTP++VQ I++ LP + IV F A I L +N AYI+EI+ +++SI K Sbjct: 58 YVSVIRGTPIVVQAMFIYFALPMALDIVLTGFAAASICLAMNAGAYITEIVCGAVLSIDK 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ DA A+GL+ Q + HI+ P S PL ++FI LK +++ I + E+ Q + Sbjct: 118 GQTDAGLALGLSYPQVMLHIVGPLAFRRSIPPLGNQFIISLKDSALFLVIGVAELAQRGE 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 ++ + T + L I+ +A YLI+T +I IE + Sbjct: 178 QLTAQTGRALEIWTAVAVFYLIMTFTLAMIMRAIEQRM 215 >gi|56808075|ref|ZP_00365870.1| COG0765: ABC-type amino acid transport system, permease component [Streptococcus pyogenes M49 591] Length = 219 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 62/167 (37%), Positives = 102/167 (61%), Gaps = 4/167 (2%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL A+V TL + I ++S+ +G +A +++I F + + YVW+ RGTPLL+ Sbjct: 15 PSLLDGALV-TLQVFFIVIILSIPLGAILAFLMKIPFKP--LQWFLTLYVWMMRGTPLLL 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QL +Y LP +GI FD A I++ TLN++AY +EI R I +IPKGQ++A+ + L Sbjct: 72 QLIFFYYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKP 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 QTIR+IILPQ + +E I+++K +S+ + + ++ ++ Sbjct: 132 LQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASK 178 >gi|323495727|ref|ZP_08100797.1| ABC transporter ATP-binding/permease protein [Vibrio sinaloensis DSM 21326] gi|323319194|gb|EGA72135.1| ABC transporter ATP-binding/permease protein [Vibrio sinaloensis DSM 21326] Length = 265 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 119/193 (61%), Gaps = 6/193 (3%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS-LIMHFYVWIFRGTPLL 71 +P L + VT+ I+ IS +L IG A++++ S++II I + Y+ + R TPLL Sbjct: 56 WPAELVEGLFVTIKISVISLAFTLAIGLTTALLKL--SNSIIGRAIANTYIELIRNTPLL 113 Query: 72 VQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 VQ++++++ P IG+ D F +++L+L AY +EI R + SI KGQ++A+ ++GL Sbjct: 114 VQIYLLYFVFGPVIGL--DRFSTAVLALSLFQGAYTAEIFRGGLNSIDKGQFEAAKSLGL 171 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 R T +ILPQ I + PL++E +S++K++S+ S + I ++ + IV+ T P Sbjct: 172 NRFFTYYDVILPQLIQRTLPPLTNEVVSLVKNSSIVSVMAIFDLTTEGRNIVAETAMPFE 231 Query: 191 IYCELAFVYLILT 203 I+ +A +YL++T Sbjct: 232 IWFTVAAIYLLVT 244 >gi|307306804|ref|ZP_07586545.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|306902095|gb|EFN32693.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 290 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 115/214 (53%), Gaps = 14/214 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG--- 80 TL + + + +++G IA++RI + ++S I Y+W+FRG P L+QL + F Sbjct: 74 TLLMTVAAMGLGIVLGVVIAIMRIS-GNPVLSSIAIGYIWVFRGAPALLQLMLWFNLALI 132 Query: 81 LPHIGI----------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P +GI V FVA ++ L ++ AY SE++RS ++S+ GQ++A+ IG+ Sbjct: 133 FPTLGIPGLFEFRTVDVMTPFVAAVLGLGISQGAYTSEVVRSGLLSVDSGQYEAARTIGM 192 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T+ +R I+LPQ + P+ +E I ++K TS+AS I EI AQ I + L Sbjct: 193 TQMMMLRRIVLPQAMRVMVPPVGNEVIGMVKLTSLASVIQYSEILHNAQIIYFANTRVLE 252 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 + +F YL++ S I Q IE + + S+ Sbjct: 253 LLLVASFWYLLVVSVLSIGQHYIERYFGRGSKSI 286 >gi|298290389|ref|YP_003692328.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296926900|gb|ADH87709.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 541 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 57/161 (35%), Positives = 96/161 (59%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +++I Y IFRGTPL++Q+ + LP IGI + A ++L LN + +I+EI+RS+ Sbjct: 49 LAIIARGYSIIFRGTPLILQMVFCYNALPLIGIKLTAISAAGLALALNEAPFIAEILRSN 108 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 +I + +GQ A A+G+T +R +I PQ I + L +E +S LK++S+AS + + E Sbjct: 109 VIGVDRGQVSAGQALGMTPAAIMRRVIAPQAIRSMVPALGNEAVSALKNSSLASVVAVQE 168 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + + ++ S T+ I+ +YLILT +IQI +E Sbjct: 169 LTLRSTQLASATFDFFSIFFASGLMYLILTGAIAVIQIVVE 209 >gi|262184190|ref|ZP_06043611.1| putative ABC transport system, permease protein [Corynebacterium aurimucosum ATCC 700975] Length = 317 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/223 (30%), Positives = 126/223 (56%), Gaps = 27/223 (12%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A + T+ I ++ +I ++ G +AV+R+ + ++ + ++W+FRGTP+ VQL +F+ Sbjct: 72 AALHTIAITILAMIIGVVGGAALAVMRMS-PNPVLGGVSWVFLWLFRGTPIYVQL--VFW 128 Query: 80 GLP-------HIG--------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 GL ++G ++ ++F+ ++ L LN +AY++EI+RS I S+P+GQ +A Sbjct: 129 GLLSALYQSINLGFTEISLTEVLNNAFLLSVLGLGLNEAAYMAEIVRSGISSVPEGQKEA 188 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP---EIFQTAQRI 181 S A+G+ T+R +LPQ + P +EFIS+LK++S+ + IP EIF A I Sbjct: 189 SKALGMGWWMTMRRTVLPQAMRIIIPPTGNEFISLLKTSSL--VVAIPYTAEIFGRATDI 246 Query: 182 VSTTYQPLIIYCELAFVYLILTSFC----YIIQIKIESSVTQH 220 + ++P+ + A YL +TS Y ++ + E T+ Sbjct: 247 SAALFEPIPLLMVAATWYLAITSLLMVGQYFLERRFERGATRE 289 >gi|296119654|ref|ZP_06838212.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Corynebacterium ammoniagenes DSM 20306] gi|295967537|gb|EFG80804.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Corynebacterium ammoniagenes DSM 20306] Length = 305 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 118/210 (56%), Gaps = 23/210 (10%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I ++ +I ++ G +AV+R+ + ++ + ++W+FRGTP+ VQL +F+GL Sbjct: 62 TLAITLLAMIIGVVGGAILAVLRMS-PNPVLRSVSWIFLWVFRGTPIYVQL--VFWGLLG 118 Query: 84 I---------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G++ +F ++ L LN +AY++EI+RS I S+P+GQ +AS A+ Sbjct: 119 ALYQSINLGFAEISLEGVLSSAFFLSVVGLGLNEAAYMAEIVRSGISSVPEGQKEASKAL 178 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP---EIFQTAQRIVSTT 185 G+ T+R ++PQ + P +EFIS+LK++S+ + IP EIF A I + Sbjct: 179 GMGWWMTMRRTVMPQAMRIIIPPTGNEFISLLKTSSL--VVAIPYTHEIFGRATDISAAL 236 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIES 215 ++P+ + A YL++TS + Q +E Sbjct: 237 FEPIPLLMVAATWYLVITSIFMVGQHYLEK 266 >gi|169668088|gb|ACA64430.1| amino acid ABC tansporter permease protein [Campylobacter fetus subsp. venerealis NCTC 10354] Length = 240 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 101/165 (61%), Gaps = 3/165 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + I +++GF +A ++ F + I+S I+ Y+ I RGTP+L+QL + + Sbjct: 47 TLGLTFGGIFIGIVLGFILAFLK-FLNIKILSFIIDEYIDIVRGTPVLLQLMI--FAFVI 103 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + + D+F A +I+L LN SAY++EI+RS I S+ KGQ +A+ A+GL+ ++R II PQ Sbjct: 104 LATLSDNFYAAVIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGLSYSVSMRQIIFPQ 163 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 + L++EFIS+ K TSV I I ++ ++ + +T + P Sbjct: 164 AVKNILPALANEFISLFKETSVVGLIGIFDLTMQSKSLQATLFSP 208 >gi|259506393|ref|ZP_05749295.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium efficiens YS-314] gi|259166034|gb|EEW50588.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium efficiens YS-314] Length = 318 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 126/233 (54%), Gaps = 27/233 (11%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W + F + A + T+ + +S +I ++ G +AV+R+ + ++ + Y+ Sbjct: 53 YGWDTYLTYLFDTRIATAALHTIALTVLSMIIGVVFGATLAVMRMS-GNPVLQGVAWLYL 111 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDS-----------------FVAIIISLTLNFSAY 105 WIFRGTP+ VQL +F+GL +G ++ + F+ ++ L LN +AY Sbjct: 112 WIFRGTPIYVQL--VFWGL--LGSLYQTVNLGFAEIDLQNFLSNMFILAVLGLGLNEAAY 167 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 ++EI+RS I ++P+GQ +AS A+G+ T+R +LPQ + P +E IS+LK+TS+ Sbjct: 168 MAEIVRSGIQAVPEGQMEASKALGMGWSLTMRRTVLPQAMRIIIPPTGNELISMLKTTSL 227 Query: 166 ASTITIP---EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + +P E++ + I + ++P+ + A YL++TS + Q +E Sbjct: 228 --VVAVPYSLELYGRSMDIAYSLFEPVPMLLVAATWYLVITSVLMVGQYYLEK 278 >gi|227873776|ref|ZP_03992005.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] gi|227840392|gb|EEJ50793.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] Length = 220 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 117/200 (58%), Gaps = 4/200 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL IA I+ SL++G IA+I ++ I++ + F V RGTP++ QL+ ++GL Sbjct: 20 VTLEIALIATFFSLVLGILIAIIS-YYQVPILNPLCKFLVSFMRGTPIVAQLYFFYFGLA 78 Query: 83 HIGIVFDSFV---AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 ++ A+ L++N A++SE IR +++S+ +GQ +A+ ++G+T Q + I Sbjct: 79 VYSVLVRDMTPISAVAFVLSVNVGAFMSESIRGALMSVEEGQKEAALSLGMTHFQVVYRI 138 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ I + PL ++FI+++KS+S+A + +P+I A+ S +Y+ +Y + VY Sbjct: 139 VLPQAIRVAIPPLFNDFINLIKSSSLAFMLGVPDIMGAARTEGSQSYRYFEVYGAVMLVY 198 Query: 200 LILTSFCYIIQIKIESSVTQ 219 ++ SF + +E + + Sbjct: 199 WVVISFFDFFRKIVEKRLKE 218 >gi|227113606|ref|ZP_03827262.1| putative amino acid ABC transporter, permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 221 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 66/198 (33%), Positives = 110/198 (55%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ + +P+LL + VT+ + ++ + + IG F A +R T++S + YV + Sbjct: 7 FSALFPFWPELL-EGLWVTIELTVMATLGGIAIGIFGAALRSG-KPTLLSRLWGVYVELI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP +VQLF I +GLP +G+ + A ++++ +N AY +EIIR+ I PKGQW+A+ Sbjct: 65 RNTPFVVQLFFIVFGLPSLGLKLTAGQAALLAMLINLGAYSTEIIRAGIQVTPKGQWEAA 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GLTR QT +ILP + L S+ I ++ +SV S ++ E+ A I S T Sbjct: 125 RVLGLTRMQTFLRVILPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFAANLIQSRT 184 Query: 186 YQPLIIYCELAFVYLILT 203 + +Y YL+L+ Sbjct: 185 FLSFEVYLATTLCYLVLS 202 >gi|57237730|ref|YP_178978.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Campylobacter jejuni RM1221] gi|57166534|gb|AAW35313.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni RM1221] gi|315058341|gb|ADT72670.1| Putative amino acid ABC tansporter permease protein [Campylobacter jejuni subsp. jejuni S3] Length = 247 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 74/205 (36%), Positives = 121/205 (59%), Gaps = 17/205 (8%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIFRGTPLLVQL----FV 76 ++TL + + +I +IIGF +A++ +FS ++ I+ Y+ I RGTP+++QL FV Sbjct: 53 LITLLLTACAVIIGVIIGFSLAIL--YFSKFKTLNFIIDEYIDIIRGTPVILQLMIFAFV 110 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 IF D+ A I++L LN SAYI+EI+RS I S+ KGQ +A+ A+GL K ++ Sbjct: 111 IF-------TFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSM 163 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL-IIYCEL 195 + IILPQ L++EFIS+ K TSV I++ +I +Q + + Y P II+ L Sbjct: 164 KEIILPQATKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNPKPIIFTGL 223 Query: 196 AFVYLILTSFCYIIQIKIESSVTQH 220 + Y+ + F Y + K+E + ++ Sbjct: 224 VY-YVSVKIFSYFAK-KLELRMNKN 246 >gi|254229000|ref|ZP_04922421.1| ABC-type arginine/histidine transport system, permease component [Vibrio sp. Ex25] gi|262394741|ref|YP_003286595.1| histidine ABC transporter permease HisM [Vibrio sp. Ex25] gi|151938468|gb|EDN57305.1| ABC-type arginine/histidine transport system, permease component [Vibrio sp. Ex25] gi|262338335|gb|ACY52130.1| histidine ABC transporter permease protein HisM [Vibrio sp. Ex25] Length = 225 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 114/203 (56%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LII+SFP L + T+ + ++ VI L + +AV R ++ SL +++ F Sbjct: 3 FSLIIESFPTYL-QGLWTTVWLVGLALVIGLCVSIPLAVARNS-TNYAFSLPSWGFIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQFFPVKDTLWENAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G+++ T R IILP + + S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMSKFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFESFLTAGLFYMALT 203 >gi|298293523|ref|YP_003695462.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296930034|gb|ADH90843.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 219 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 117/223 (52%), Gaps = 9/223 (4%) Query: 6 FN--LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 FN +I+ S P LL A+ V T+ + S I IG + + S + + I FYV Sbjct: 2 FNTAIIVKSLPMLLEAS-VWTVVYSLTSVAIGFCIGTLMCAAGLSQSKPMRA-IAAFYVS 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRG PLLVQL + +Y LP IG+ S VA + +L L AYI+EI+R + IP G + Sbjct: 60 FFRGVPLLVQLLISYYCLPLIGVNVPSSVAAVGTLALCTGAYIAEILRGGFLGIPAGLIE 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +GL R Q + I +P + + L +E ++K++S+ S + + E+ + AQ I + Sbjct: 120 AARMVGLNRVQILTRIEVPMAVRFTLPSLVNETTMMVKASSLISVVGVLELTRLAQNIAT 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 +T+QPL IY +Y ++ I + + + V+K Sbjct: 180 STFQPLEIYLTAGAIYFLING-----AITLAGDFAESRFRVEK 217 >gi|261250662|ref|ZP_05943237.1| putative amino acid ABC transporter permease protein [Vibrio orientalis CIP 102891] gi|260939231|gb|EEX95218.1| putative amino acid ABC transporter permease protein [Vibrio orientalis CIP 102891] Length = 246 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 117/210 (55%), Gaps = 11/210 (5%) Query: 2 KYEWFNLIID-------SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-I 53 Y+W ++D + Q L A T+ ++ +S + ++ IG +A+ + SD+ + Sbjct: 19 DYQWGWYVLDPTTAQGQTNLQFLIAGFYDTISVSLLSMLFAMTIGLVVALPSL--SDSKL 76 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRS 112 + YV + R P+LV L ++YG+P + I D F A +I+LT+ SA+++E+ R Sbjct: 77 LKAFNRVYVEVIRSIPVLVLLLWVYYGMPTLMDISLDHFWAGVIALTIAESAFMAEVFRG 136 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I +I KGQ +A+ ++GL Q +R +ILPQ + PL ++FI ILK +S+ S I + Sbjct: 137 GIQAIAKGQHEAASSLGLNYWQRMRLVILPQALRQILPPLGNQFIYILKMSSLVSVIGLS 196 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 ++ + A +V Y PL IY L YL+L Sbjct: 197 DLTRRANELVVNEYLPLEIYTFLVLEYLVL 226 >gi|227328458|ref|ZP_03832482.1| ABC transporter permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 314 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 75/246 (30%), Positives = 131/246 (53%), Gaps = 25/246 (10%) Query: 2 KYEWFNLIIDSFPQ-LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++EW +++DSF + + +++TL + IS V+ G +A++R+ S+ ++ + Sbjct: 43 RFEW-RVVVDSFTEDSILQGVIMTLKLTAISVVLGFGGGTILALMRLS-SNPVLVAVSWG 100 Query: 61 YVWIFRGTPLLVQLFV----------IFYGLPHIGIVFD--------SFVAIIISLTLNF 102 Y W FRG P LVQLF+ I LP +G +F F A +++L ++ Sbjct: 101 YTWFFRGVPTLVQLFLWYNIAALYPTISLSLPFVGELFSVPGNTLISPFNAAVLALVMHQ 160 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 SAY +EI+R+ I S+ GQ +A+ A+G + Q + +LPQ + P +E I LK+ Sbjct: 161 SAYAAEIVRAGIQSVNPGQLEAARALGYRKPQIFFYTVLPQAMRAILPPAGNEVIGQLKT 220 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T+V S I++ ++ +AQ I TY+ PL++ + YL+LTS + Q +E + Sbjct: 221 TAVVSVISLQDVLYSAQIIYQRTYEVIPLLLVATI--WYLLLTSVLSVGQYYVERYFGRS 278 Query: 221 TYSVDK 226 T +K Sbjct: 279 TLKRNK 284 >gi|163941903|ref|YP_001646787.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] gi|163864100|gb|ABY45159.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] Length = 219 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 121/215 (56%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I S V+ I+G +A+ +I ++++ Y IF Sbjct: 5 FSAITPSIPYIL-KGLEVTLKIVAASAVVGFILGTLLALCKIA-RIRVLNIAADIYTSIF 62 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P + G +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 63 RGTPLVLQLMIIYFGVPQMMGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 123 AMALGIPYSKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y IL ++ IE + + Sbjct: 183 TFKYLEPLLFVGLIYYILVIILTLVGKTIEGRMKK 217 >gi|126665865|ref|ZP_01736846.1| glutamine ABC transporter permease [Marinobacter sp. ELB17] gi|126629799|gb|EBA00416.1| glutamine ABC transporter permease [Marinobacter sp. ELB17] Length = 223 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 87/144 (60%), Gaps = 1/144 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ IFRGTP+LVQ+ IFYGLP +G D VA I ++ LN AYISE++R + SI + Sbjct: 62 YIEIFRGTPILVQVLFIFYGLPDLVGGPIDPLVAGIAAIALNSGAYISEVVRGGVQSIDR 121 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A ++GL+R Q+ I+ PQ PL ++ I +K TS+ S I + E+ + Q Sbjct: 122 GQTEAGLSLGLSRTQSFWSIVWPQAFRRMIPPLGNQAIVSIKDTSLFSVIGVGELVRQGQ 181 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 ++ T+ +Y +A +YL +T Sbjct: 182 VYIANTFTAFEVYFVVALMYLAIT 205 >gi|307320801|ref|ZP_07600211.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306893511|gb|EFN24287.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] Length = 290 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 115/214 (53%), Gaps = 14/214 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG--- 80 TL + + + +++G IA++RI + ++S I Y+W+FRG P L+QL + F Sbjct: 74 TLLMTVAAMGLGIVLGVVIAIMRIS-GNPVLSSIAIGYIWVFRGAPALLQLMLWFNLALI 132 Query: 81 LPHIGI----------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P +GI V FVA ++ L ++ AY SE++RS ++S+ GQ++A+ IG+ Sbjct: 133 FPTLGIPGLFEFRTVDVMTPFVAAVLGLGISQGAYTSEVVRSGLLSVDSGQYEAARTIGM 192 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T+ +R I+LPQ + P+ +E I ++K TS+AS I EI AQ I + L Sbjct: 193 TQMMMLRRIVLPQAMRVMVPPVGNEVIGMVKLTSLASVIQYSEILHNAQIIYFANTRVLE 252 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 + +F YL++ S I Q IE + + S+ Sbjct: 253 LLLVASFWYLLVVSVLSIGQHYIERYFGRGSKSI 286 >gi|15675231|ref|NP_269405.1| putative amino acid ABC transporter permease [Streptococcus pyogenes M1 GAS] gi|71903621|ref|YP_280424.1| histidine transport system permease protein M [Streptococcus pyogenes MGAS6180] gi|71910797|ref|YP_282347.1| histidine transporter permease [Streptococcus pyogenes MGAS5005] gi|94990607|ref|YP_598707.1| histidine transport system permease protein hisM [Streptococcus pyogenes MGAS10270] gi|209559536|ref|YP_002286008.1| Amino acid ABC transporter, permease protein [Streptococcus pyogenes NZ131] gi|251782501|ref|YP_002996803.1| histidine transport system permease [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|13622400|gb|AAK34126.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes M1 GAS] gi|71802716|gb|AAX72069.1| histidine transport system permease protein M [Streptococcus pyogenes MGAS6180] gi|71853579|gb|AAZ51602.1| histidine transport system permease protein [Streptococcus pyogenes MGAS5005] gi|94544115|gb|ABF34163.1| Histidine transport system permease protein hisM [Streptococcus pyogenes MGAS10270] gi|209540737|gb|ACI61313.1| Amino acid ABC transporter, permease protein [Streptococcus pyogenes NZ131] gi|242391130|dbj|BAH81589.1| histidine transport system permease protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323127387|gb|ADX24684.1| Amino acid ABC transporter, permease protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 213 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 62/167 (37%), Positives = 102/167 (61%), Gaps = 4/167 (2%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL A+V TL + I ++S+ +G +A +++I F + + YVW+ RGTPLL+ Sbjct: 9 PSLLDGALV-TLQVFFIVIILSIPLGAILAFLMKIPFKP--LQWFLTLYVWMMRGTPLLL 65 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QL +Y LP +GI FD A I++ TLN++AY +EI R I +IPKGQ++A+ + L Sbjct: 66 QLIFFYYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKP 125 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 QTIR+IILPQ + +E I+++K +S+ + + ++ ++ Sbjct: 126 LQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASK 172 >gi|21910444|ref|NP_664712.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes MGAS315] gi|28896019|ref|NP_802369.1| amino acid ABC transporter (permease protein) [Streptococcus pyogenes SSI-1] gi|21904642|gb|AAM79515.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes MGAS315] gi|28811269|dbj|BAC64202.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes SSI-1] Length = 213 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 62/167 (37%), Positives = 102/167 (61%), Gaps = 4/167 (2%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL A+V TL + I ++S+ +G +A +++I F + + YVW+ RGTPLL+ Sbjct: 9 PSLLDGALV-TLQVFFIVIILSIPLGAILAFLMKIPFKP--LQWFLTLYVWMMRGTPLLL 65 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QL +Y LP +GI FD A I++ TLN++AY +EI R I +IPKGQ++A+ + L Sbjct: 66 QLIFFYYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKP 125 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 QTIR+IILPQ + +E I+++K +S+ + + ++ ++ Sbjct: 126 LQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASK 172 >gi|300811394|ref|ZP_07091890.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|313123231|ref|YP_004033490.1| glutamine ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|300497629|gb|EFK32655.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|312279794|gb|ADQ60513.1| Glutamine ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325684595|gb|EGD26754.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 222 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 124/218 (56%), Gaps = 14/218 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD---TIISLIMHFY 61 W NL + L VT+ ++ IS ++S +IG + +IR D T IS ++ Sbjct: 10 WINL------RFLLQGFWVTIEVSVISIILSFVIGLALGLIRFTRIDAKTTRISKVVGVI 63 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + I R PLL+ +F ++GLP +GI D+ A +I++ + SA I+E++RS I+++ GQ Sbjct: 64 IDIIRNLPLLLIIFFSYFGLPVMGIRVDAVQASVIAMVVFESAMIAEVVRSGIMAVDPGQ 123 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 + + + G+T Q + H++LPQ +T L S+F+S++K TS+A+ I +PE+ A+ I Sbjct: 124 MEGARSNGMTYMQAMTHVVLPQALTKMIPALLSQFVSLIKDTSLATIIVLPELLYHAEII 183 Query: 182 VSTTYQPLI-IYCELAFVYLI----LTSFCYIIQIKIE 214 + +I +Y +A +Y I L+SF + +I+ Sbjct: 184 YNQNTNYMIPMYLAVAVMYFIICFALSSFANYLSKRIK 221 >gi|119387646|ref|YP_918680.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119378221|gb|ABL72984.1| amino acid ABC transporter membrane protein 1, PAAT family [Paracoccus denitrificans PD1222] Length = 251 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 114/197 (57%), Gaps = 2/197 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ + + +PQLL +V T ++ +S + ++G +A+ R S ++ I YV Sbjct: 31 FSFLAEYWPQLL-KGLVQTAQLSLLSIIFGFLLGTLLAIGRTAQSK-LLRRICAIYVEAI 88 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLLVQ+F+I++GL +G + ++++ +N S+Y EI+R+ I S+ KGQ +AS Sbjct: 89 RNTPLLVQMFMIYFGLASVGFKLSAEFCAVLAIVINVSSYTCEIMRAGIESVRKGQREAS 148 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GLT Q++ ++LP L S+FI I+ +TS+ S I+ E+ TA RI S T Sbjct: 149 DCLGLTWLQSLFLVVLPPATERVYPALVSQFILIMLATSLVSQISAEELTSTAARIDSMT 208 Query: 186 YQPLIIYCELAFVYLIL 202 ++ IY +A +Y+ L Sbjct: 209 FRSFEIYTVVALIYIGL 225 >gi|332704804|ref|ZP_08424892.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio africanus str. Walvis Bay] gi|332554953|gb|EGJ51997.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio africanus str. Walvis Bay] Length = 233 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 113/191 (59%), Gaps = 10/191 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++ W +I + Q + +++TL I+ +S V+SL++G IAV+R+ ++ + Y Sbjct: 4 QFNWQAVITGEYGQWIMDGLLITLQISAVSIVLSLVLGTLIAVMRLT-KVRLLEWLALAY 62 Query: 62 VWIFRGTPLLVQLFVIFYG----LPHIGIVF----D-SFVAIIISLTLNFSAYISEIIRS 112 FR TPLLVQLF ++G LP + D F A +ISLT+ SA+I+E IRS Sbjct: 63 TEFFRNTPLLVQLFFWYFGSHAVLPEFVNTWLYEHDFEFGAGVISLTVYTSAFIAEEIRS 122 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I +IPK Q +AS A GL+ Q + H+ILPQ PL S+F++++K++S+ TI + Sbjct: 123 GIFAIPKTQLEASRACGLSFLQAMHHVILPQAFRIIIPPLISQFLNLIKNSSLVMTIGVM 182 Query: 173 EIFQTAQRIVS 183 ++ A++I S Sbjct: 183 DLMYMARQIES 193 >gi|254456259|ref|ZP_05069688.1| ABC transporter permease component [Candidatus Pelagibacter sp. HTCC7211] gi|207083261|gb|EDZ60687.1| ABC transporter permease component [Candidatus Pelagibacter sp. HTCC7211] Length = 243 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 63/161 (39%), Positives = 95/161 (59%), Gaps = 1/161 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV I R PLLV + I+YGLP GI F FV+ II+L ++ SA+ +EI R+ I SI K Sbjct: 83 YVEIVRAVPLLVLILWIYYGLPIMTGISFSPFVSGIIALAISESAFQAEIFRAGINSIKK 142 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 QW+A ++GL + +R +ILPQ I + ++F+ +LK +S+ S I I ++ + A Sbjct: 143 AQWEAGSSLGLNFFKRLRLVILPQAIKNILPAIGNQFVYVLKMSSLVSIIGIGDLTRKAN 202 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +V TTY+PL IY L YL+L K+E ++ + Sbjct: 203 ELVVTTYRPLEIYTFLILEYLVLILIVSFFVRKLEKNLKKD 243 >gi|116513635|ref|YP_812541.1| ABC-type amino acid transport system, permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092950|gb|ABJ58103.1| amino acid ABC transporter membrane protein 2, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 222 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 125/218 (57%), Gaps = 14/218 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD---TIISLIMHFY 61 W NL + L VT+ ++ IS ++S +IG + +IR D T IS ++ Sbjct: 10 WINL------RFLLQGFWVTIEVSVISIILSFVIGLALGLIRFTRIDAKTTRISKVVGVI 63 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + I R PLL+ +F ++GLP +GI D+F A +I++ + SA I+E++RS I+++ GQ Sbjct: 64 IDIIRNLPLLLIIFFSYFGLPVMGIRVDAFQASVIAMVVFESAMIAEVVRSGIMAVDPGQ 123 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 + + + G+T Q + H++ PQ ++ L S+F+S++K TS+A+ I +PE+ A+ I Sbjct: 124 MEGARSNGMTYMQAMTHVVFPQALSKMIPALLSQFVSLIKDTSLATIIVLPELLYHAEII 183 Query: 182 VSTTYQPLI-IYCELAFVYLI----LTSFCYIIQIKIE 214 + + +I +Y +A +Y I L+SF + +I+ Sbjct: 184 YNQNTKYMIPMYLAVAVMYFIICFALSSFANYLSKRIK 221 >gi|315640083|ref|ZP_07895208.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] gi|315484211|gb|EFU74682.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] Length = 536 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 112/210 (53%), Gaps = 14/210 (6%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISL 56 F II + +L + +TL +A +S IIG + V R F + + Sbjct: 298 FKQIIQQYWKLFLSGAALTLFVAVVSTFAGTIIGLLVGVFRTLPVSENPVSRFFQKVFNG 357 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + Y+ +FRGTP++VQ VIFYGL HI + + VA ++ +++N AY+SEI+R Sbjct: 358 FLTIYIEVFRGTPMMVQAMVIFYGLALAFHIDL--NRTVAALLIVSINTGAYMSEIVRGG 415 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++ KGQ++A+ AIG+ +QT+ ++LPQ + + +E + +K T+V S I++ + Sbjct: 416 IFAVDKGQFEAAQAIGMNHRQTMTKVVLPQVLRNILPAIGNETVINIKDTAVLSVISVTD 475 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +F T Q + + +YL++T Sbjct: 476 LFFAGSVASGTNLQFFPTFTIIGIIYLVMT 505 >gi|302336895|ref|YP_003802101.1| polar amino acid ABC transporter inner membrane protein [Spirochaeta smaragdinae DSM 11293] gi|301634080|gb|ADK79507.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 225 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 65/193 (33%), Positives = 107/193 (55%), Gaps = 10/193 (5%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 LL + VT+ + + +I+G +A++R+ + + ++I YV I RGTP+LVQL Sbjct: 21 HLLLNGLKVTIVVTLFAITAGVILGTLLALMRLS-KNKVANIISKLYVEIIRGTPVLVQL 79 Query: 75 ----FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 FVIF L D +A ++ +N AY++EIIR+ I ++ KGQ +A+ ++GL Sbjct: 80 LIIYFVIFRALD-----VDKTMASSLAFGINSGAYVAEIIRAGIQAVDKGQMEAARSLGL 134 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + ++ IILPQ I L +EFI +LK TS+ I ++ + +I S TY+ + Sbjct: 135 PHRLAMKEIILPQAIKNILPALGNEFIVLLKETSIIGFIGGNDLMRAGNKIRSITYEATV 194 Query: 191 IYCELAFVYLILT 203 A +YLI+T Sbjct: 195 PLFATAVIYLIIT 207 >gi|223939003|ref|ZP_03630888.1| polar amino acid ABC transporter, inner membrane subunit [bacterium Ellin514] gi|223892299|gb|EEF58775.1| polar amino acid ABC transporter, inner membrane subunit [bacterium Ellin514] Length = 264 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 77/204 (37%), Positives = 115/204 (56%), Gaps = 3/204 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-IRIFFSDTIISLIMH 59 + Y W I + Q + V T+ I+ S +S IGF A+ R F Sbjct: 45 VNYHWNWSSIYKYRQKFFQGWVTTILISLASLGLSTCIGFIFALGQRTRFLP--FRYFSK 102 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ I RGTPLLVQ+ + FY + + V + ++ I++L+ AYISE+IR+ I S+ K Sbjct: 103 LYIEIVRGTPLLVQILIFFYVVANAFRVENRYLVGILTLSFFSGAYISEVIRAGIESVGK 162 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q +++ AIGLTR QT R++I+PQ I S PL+ +F+S++K +S+ S I+I E AQ Sbjct: 163 SQIESARAIGLTRAQTYRYVIVPQAIRQSLPPLAGQFVSLIKDSSLLSIISISEFTLNAQ 222 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 + S T+ L Y LA YL+LT Sbjct: 223 EVNSYTFSTLESYIPLAVGYLVLT 246 >gi|163792348|ref|ZP_02186325.1| ABC polar amino acid transporter, inner membrane subunit [alpha proteobacterium BAL199] gi|159182053|gb|EDP66562.1| ABC polar amino acid transporter, inner membrane subunit [alpha proteobacterium BAL199] Length = 227 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/196 (35%), Positives = 115/196 (58%), Gaps = 8/196 (4%) Query: 9 IIDSF-PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +ID + P +L+ +++T+ +A + +G +A +R F + LI+ F V + R Sbjct: 16 VIDKYLPDILWG-MIITVEVALAVVATGIALGLLLAAVRSFRVRPVNVLIVLF-VDVLRA 73 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 P LV + +I++GLP +GI F + + L+L +A+ EI S I+SI KGQW+A+ + Sbjct: 74 LPPLVLILIIYFGLPSVGIRLSGFAVLWLVLSLVLAAFAEEIFWSGILSIRKGQWEAARS 133 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF---QTAQRIVST 184 GLT QT+ H+ILPQ + + PL++ I+I K+T++ + I +PEI QTAQ S Sbjct: 134 TGLTFLQTLTHVILPQAVRMTVPPLTNRTIAITKNTALGAVIGVPEILMQAQTAQSF-SG 192 Query: 185 TYQPLIIYCELAFVYL 200 PL++ LA++ L Sbjct: 193 NATPLLLGA-LAYIVL 207 >gi|222152518|ref|YP_002561693.1| glutamine ABC transporter glutamine-binding protein/permease [Streptococcus uberis 0140J] gi|222113329|emb|CAR40917.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus uberis 0140J] Length = 516 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 96/167 (57%), Gaps = 1/167 (0%) Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ Y+ +FRGTP++VQ VI+YG GI D +A I +++N AY++EI+R I + Sbjct: 343 LNVYIEVFRGTPMIVQSMVIYYGTAQAFGISIDRTLAAIFIVSINTGAYMTEIVRGGIFA 402 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + KGQ++A+ A+G T QT+R I+LPQ + +EF+ +K TSV + I++ E++ Sbjct: 403 VDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYF 462 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + + + YQ + +A +Y ILT I +E + Y+ Sbjct: 463 SGNTVATQNYQYFQTFSVIAVIYFILTFTVTRILRYVERRIDDDNYT 509 >gi|307299245|ref|ZP_07579046.1| polar amino acid ABC transporter, inner membrane subunit [Thermotogales bacterium mesG1.Ag.4.2] gi|306915041|gb|EFN45427.1| polar amino acid ABC transporter, inner membrane subunit [Thermotogales bacterium mesG1.Ag.4.2] Length = 244 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 116/215 (53%), Gaps = 10/215 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH--- 59 + W L + +L I+ TL ++ I+ +++I+G +A+ R D+ ++L Sbjct: 31 FNWSTL--TKYYKLFLDGIMTTLQLSVIALALAVIVGIAVALAR----DSKVNLFRDAGT 84 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YVW FR PLLV + +++YG + D F A +ISL+L AY+ EI R+ I ++P Sbjct: 85 LYVWFFRNMPLLVVILLVYYGFGS-AVNVDRFWAGVISLSLFEGAYVGEIFRAGIDAVPS 143 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G+ +A A+GL R Q + I+ PQ S PL + ++++K +S+ S I + ++ A+ Sbjct: 144 GEKEAGEAMGLYRSQIMFSIVFPQAFRISIPPLIGQLVTLIKDSSLVSVIALGDLTMKAR 203 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 ++ + T Y LA YL++TS ++ +E Sbjct: 204 QVGTQTLAVFEAYIVLAACYLVMTSLVSLVGRILE 238 >gi|229104758|ref|ZP_04235419.1| Arginine transport system permease protein artQ [Bacillus cereus Rock3-28] gi|228678631|gb|EEL32847.1| Arginine transport system permease protein artQ [Bacillus cereus Rock3-28] Length = 225 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 66/198 (33%), Positives = 116/198 (58%), Gaps = 8/198 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I +S ++ I+G +A+ +I + ++ Y IF Sbjct: 11 FSAITPSIPYIL-KGLEVTLKIVAVSALVGFILGTLLALCKIARIRAL-NIAADLYTSIF 68 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P I G +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 69 RGTPLVLQLMIIYFGVPQIIGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 128 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 129 AMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 188 Query: 185 TYQPLIIYCE-LAFVYLI 201 T++ Y E L FV LI Sbjct: 189 TFK----YLEPLLFVGLI 202 >gi|205356386|ref|ZP_03223151.1| putative amino-acid ABC tansporter permease protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205345771|gb|EDZ32409.1| putative amino-acid ABC tansporter permease protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 247 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 119/204 (58%), Gaps = 15/204 (7%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL----FVI 77 ++TL + + +I +IIGF +A++ F ++ I+ Y+ I RGTP+++QL FVI Sbjct: 53 LITLLLTACAVIIGVIIGFSLAILH-FSKFKTLNFIIDEYIDIIRGTPVILQLMIFAFVI 111 Query: 78 FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 F D+ A I++L LN SAYI+EI+RS I S+ KGQ +A+ A+GL K +++ Sbjct: 112 F-------TFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMK 164 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL-IIYCELA 196 IILPQ L++EFIS+ K TSV I++ +I +Q + + Y P II+ L Sbjct: 165 EIILPQATKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNPKPIIFTGLV 224 Query: 197 FVYLILTSFCYIIQIKIESSVTQH 220 + Y+ + F Y + K+E + ++ Sbjct: 225 Y-YVSVKIFSYFAK-KLELRMNKN 246 >gi|118474738|ref|YP_892387.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Campylobacter fetus subsp. fetus 82-40] gi|118413964|gb|ABK82384.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter fetus subsp. fetus 82-40] Length = 239 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 101/165 (61%), Gaps = 3/165 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + I +++GF +A ++ F + I+S I+ Y+ I RGTP+L+QL + + Sbjct: 46 TLGLTFGGIFIGIVLGFILAFLK-FLNIKILSFIIDEYIDIVRGTPVLLQLMI--FAFVI 102 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + + D+F A +I+L LN SAY++EI+RS I S+ KGQ +A+ A+GL+ ++R II PQ Sbjct: 103 LATLSDNFYAAVIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGLSYSVSMRQIIFPQ 162 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 + L++EFIS+ K TSV I I ++ ++ + +T + P Sbjct: 163 AVKNILPALANEFISLFKETSVVGLIGIFDLTMQSKSLQATLFSP 207 >gi|281355806|ref|ZP_06242300.1| polar amino acid ABC transporter, inner membrane subunit [Victivallis vadensis ATCC BAA-548] gi|281318686|gb|EFB02706.1| polar amino acid ABC transporter, inner membrane subunit [Victivallis vadensis ATCC BAA-548] Length = 239 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 124/224 (55%), Gaps = 17/224 (7%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHFYV 62 N I D + L+ T+ I+ + ++ +++GF +AVIR T +++ + Y+ Sbjct: 22 NFIKDDRWRYLWDGFWTTIGISFAAVLLGVLLGFTVAVIRSTHDKTGKLRLLNWLCKLYL 81 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDS-----FVAIIISLTLNFSAYISEIIRSSIISI 117 + RGTP++VQL +I++ ++F S + I++ +N AY++EIIR I+SI Sbjct: 82 TVIRGTPVVVQLLIIYF------VIFGSVNISKILVAIVAFGVNSGAYVAEIIRGGIMSI 135 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ++A ++GL+ QT+ +IILPQ L +EFI +LK TSV+ I + ++ + Sbjct: 136 DKGQFEAGRSLGLSYIQTMIYIILPQAFKNVLPALGNEFIVLLKETSVSGYIALQDLTKG 195 Query: 178 AQRIVSTTYQPLIIYCELAFVYL-ILTSFCYIIQIKIESSVTQH 220 I S TY + +A +YL ++ F +++ K+E + + Sbjct: 196 GDIIRSQTYTAFMPLIAVALIYLAVVMQFSWLLG-KLERRLKNN 238 >gi|227875551|ref|ZP_03993691.1| permease protein of ABC superfamily ATP binding cassette transporter system [Mobiluncus mulieris ATCC 35243] gi|306818861|ref|ZP_07452583.1| ABC superfamily ATP binding cassette transporter, permease protein [Mobiluncus mulieris ATCC 35239] gi|307700944|ref|ZP_07637969.1| ABC transporter, permease protein [Mobiluncus mulieris FB024-16] gi|227843887|gb|EEJ54056.1| permease protein of ABC superfamily ATP binding cassette transporter system [Mobiluncus mulieris ATCC 35243] gi|304648547|gb|EFM45850.1| ABC superfamily ATP binding cassette transporter, permease protein [Mobiluncus mulieris ATCC 35239] gi|307613939|gb|EFN93183.1| ABC transporter, permease protein [Mobiluncus mulieris FB024-16] Length = 302 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 71/229 (31%), Positives = 118/229 (51%), Gaps = 18/229 (7%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 Y W + F + I TL + + I +++ +A++R + ++ + FY Sbjct: 41 NYHWDKVWEYLFHPTIIRGIGFTLVLTVAAMFIGVVLAVTMAIMRQS-PNPVLKSVAWFY 99 Query: 62 VWIFRGTPLLVQLFVIFYGL-----PHIGI---------VFDSFVAIIISLTLNFSAYIS 107 +W FRGTP+ QL IF+GL P +G+ V++ A I+ L LN AY++ Sbjct: 100 IWFFRGTPIYTQL--IFWGLLPTLYPFVGVGVFKIDINVVWNVLWAAILGLGLNEGAYLA 157 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 EI+R+ + S+ GQW+A+ A+G+ R +R IILPQ + P +E IS+LK+TS+ S Sbjct: 158 EIVRAGLNSVDPGQWEAATALGMKRSLIMRRIILPQAMRVIVPPTGNETISMLKTTSLVS 217 Query: 168 TITIP-EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 I E+ AQ + + P+ + A YL++TS + Q +E Sbjct: 218 AIPFTMELTFAAQALGRQIFMPVPMLISAAIWYLVVTSILMVGQFYLEK 266 >gi|218886663|ref|YP_002435984.1| polar amino acid ABC transporter inner membrane protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757617|gb|ACL08516.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 224 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 119/210 (56%), Gaps = 3/210 (1%) Query: 7 NLIIDS-FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + ++D FP L A + +++ + S V L+ G I ++R+F + I + Y +F Sbjct: 5 DFLVDRVFPSL-NAGLWMSVKLIVPSAVFGLLFGVIIGIVRVF-GKPWMQRIANAYTALF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG PLLVQLF++++GLP+IGI + + A ++ L +AY SE +R +++SI +GQ A+ Sbjct: 63 RGVPLLVQLFILYFGLPNIGIYLEPYAASVLGFILCSAAYNSEYVRGALLSIRQGQLRAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G + QT+ I++PQ + + +E + ++K +S+A IT E+ A+ + S T Sbjct: 123 QALGFSTMQTLVSIVVPQAVRRALPGCGNEIVYLIKYSSLAYVITCIELTGEAKVLASRT 182 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIES 215 ++ ++ + YL L + + K+E Sbjct: 183 FRFTEVFLVVGAYYLFLVTVASWLLHKLEE 212 >gi|16081000|ref|NP_391828.1| ABC transporter permease [Bacillus subtilis subsp. subtilis str. 168] gi|221311922|ref|ZP_03593769.1| hypothetical protein Bsubs1_21306 [Bacillus subtilis subsp. subtilis str. 168] gi|221316246|ref|ZP_03598051.1| hypothetical protein BsubsN3_21217 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221321158|ref|ZP_03602452.1| hypothetical protein BsubsJ_21165 [Bacillus subtilis subsp. subtilis str. JH642] gi|221325442|ref|ZP_03606736.1| hypothetical protein BsubsS_21316 [Bacillus subtilis subsp. subtilis str. SMY] gi|1731314|sp|P54953|YXEN_BACSU RecName: Full=Probable amino-acid permease protein yxeN gi|1408499|dbj|BAA08330.1| yxeN [Bacillus subtilis] gi|2636495|emb|CAB15985.1| putative ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] Length = 224 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 122/219 (55%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W +I +FP L+ A+ +TL +A + + ++I G +A+I ++ + Y+ Sbjct: 5 DW-EFMISAFPTLI-QALPITLFMAIAAMIFAIIGGLILALITKN-KIPVLHQLSKLYIS 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI---IISLTLNFSAYISEIIRSSIISIPKG 120 FRG P LVQLF+I+YGLP + A+ II L+L +AY++EI R+++ S+ G Sbjct: 62 FFRGVPTLVQLFLIYYGLPQLFPEMSKMTALTAAIIGLSLKNAAYLAEIFRAALNSVDDG 121 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A ++G+T+ Q R IILPQ I + + FI +LK TS+A T+ + E+F + Sbjct: 122 QLEACLSVGMTKFQAYRRIILPQAIRNAIPATGNTFIGLLKETSLAFTLGVMEMFAQGKM 181 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S + Y +A VY +LT I+Q E ++++ Sbjct: 182 YASGNLKYFETYLAVAIVYWVLTIIYSILQDLFERAMSK 220 >gi|227329359|ref|ZP_03833383.1| putative amino acid ABC transporter, permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 221 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 66/198 (33%), Positives = 110/198 (55%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ + +P+LL + VT+ + ++ + + IG F A +R T++S + YV + Sbjct: 7 FSALFPFWPELL-EGLWVTIELTVMATLGGIAIGIFGAALRSG-KPTLLSRLWGVYVELI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP +VQLF I +GLP +G+ + A ++++ +N AY +EIIR+ I PKGQW+A+ Sbjct: 65 RNTPFVVQLFFIVFGLPSLGLKLTAGQAALLAMLINLGAYSTEIIRAGIQVTPKGQWEAA 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GLTR QT +ILP + L S+ I ++ +SV S ++ E+ A I S T Sbjct: 125 RVLGLTRMQTFLRVILPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFAANLIQSRT 184 Query: 186 YQPLIIYCELAFVYLILT 203 + +Y YL+L+ Sbjct: 185 FLSFEVYLATTLCYLMLS 202 >gi|59712192|ref|YP_204968.1| histidine/lysine/arginine/ornithine transporter subunit [Vibrio fischeri ES114] gi|59480293|gb|AAW86080.1| histidine/lysine/arginine/ornithine transporter subunit [Vibrio fischeri ES114] Length = 225 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 115/204 (56%), Gaps = 9/204 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++II+SFP L + T+ + +S VI L I A+ R ++ ++ L Y++ F Sbjct: 3 FSIIIESFPVYL-EGLWTTVWLVAVSLVIGLCIAVPTAIARNS-NNPVLWLPAWAYIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD------SFVAIIISLTLNFSAYISEIIRSSIISIPK 119 RGTPLL+QL++I+YG+ V D SF A++ + +LN AY +EI+R SI +P+ Sbjct: 61 RGTPLLIQLYLIYYGMDQFFSVKDTLWEHASFCALV-AFSLNTGAYTAEIVRGSINGLPQ 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G+ +A+ A G+ + QT + IILP + + S+E I +L +++A +T+ ++ A+ Sbjct: 120 GEVEAAKAYGMNQFQTYKRIILPSALRRALPAYSNEVIFMLHGSAIAGIVTLLDLTGAAR 179 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 + S Y P Y Y+ LT Sbjct: 180 LVNSRYYAPFESYIAAGMFYMCLT 203 >gi|86150250|ref|ZP_01068477.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni CF93-6] gi|85839366|gb|EAQ56628.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni CF93-6] Length = 247 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 119/204 (58%), Gaps = 15/204 (7%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL----FVI 77 ++TL + + +I +IIGF +A++ F ++ I+ Y+ I RGTP+++QL FVI Sbjct: 53 LITLLLTACAVIIGVIIGFSLAILH-FSKFKTLNFIIDEYIDIIRGTPVILQLMIFAFVI 111 Query: 78 FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 F D+ A I++L LN SAYI+EI+RS I S+ KGQ +A+ A+GL K +++ Sbjct: 112 F-------TFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMK 164 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL-IIYCELA 196 IILPQ L++EFIS+ K TSV I++ +I +Q + + Y P II+ L Sbjct: 165 EIILPQATKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNPKPIIFTGLV 224 Query: 197 FVYLILTSFCYIIQIKIESSVTQH 220 + Y+ + F Y + K+E + ++ Sbjct: 225 Y-YVSVKIFSYFAK-KLELRMNKN 246 >gi|239834626|ref|ZP_04682954.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239822689|gb|EEQ94258.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 216 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 121/198 (61%), Gaps = 7/198 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ ++F + G +A+ R + + +M Y+ IF+GTPLL+QLF +++GLP Sbjct: 20 TVILSLLAFTFGGMGGLVVALGRTS-AKRWLRYLMATYIQIFQGTPLLIQLFFVYFGLPI 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +GI D +VA+II L+L+ SA++ EI R SI ++ GQ +A+ A+G+ ++ ++LPQ Sbjct: 79 LGIRVDIWVALIIGLSLHASAFLGEIWRGSIQAVSTGQDEAARALGIGYFHRMKDVVLPQ 138 Query: 144 TITTSAVPLSSEF-ISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI- 201 +P + F ++++K T++A+ + + E+ ++ Q + + T++P+ +Y + +Y I Sbjct: 139 AFRI-GLPATIGFLVNLIKGTALAALLGLTELTRSGQLMANITFEPMKVYGTVGLIYFII 197 Query: 202 ---LTSFCYIIQIKIESS 216 LT + I+ ++ ++ Sbjct: 198 CVPLTYYSARIEKRLNAT 215 >gi|229541936|ref|ZP_04430996.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus coagulans 36D1] gi|229326356|gb|EEN92031.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus coagulans 36D1] Length = 235 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 118/215 (54%), Gaps = 8/215 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L VTL +A ++ V+S +IG + ++R + I+S I+ V I R PL++ +F Sbjct: 15 LLKGFAVTLEVAFVAIVLSFLIGCILGILR-YAKIPILSPIVALVVEITRNLPLILIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP +G+ A I +LT+ SA I+EI+R + +IPKGQ +A+ + GL QT+ Sbjct: 74 TYFALPEVGMKMSVTAAAISALTVFESAMIAEIVRGGLNAIPKGQIEAARSSGLKYIQTL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ-----PLII 191 +IILPQ + PL S+FIS+LK TS+A I +PE+ A+ I + P+++ Sbjct: 134 WYIILPQALKKMIPPLVSQFISLLKDTSLAIIIALPELLHNAKGIYNGEGGSKYIIPILL 193 Query: 192 YCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 AF+Y ++ I+ ++E + + + Sbjct: 194 MA--AFMYFVVNYLLSILARRLEKRLDPDRSAAKQ 226 >gi|332975354|gb|EGK12248.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette transporter, membrane protein [Desmospora sp. 8437] Length = 209 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 77/196 (39%), Positives = 107/196 (54%), Gaps = 16/196 (8%) Query: 14 PQLLYAAIVVT--LPIACI-SFVISLIIGFF----IAVIRIFFSDTIISLIMHFYVWIFR 66 P LL A+V L IA I SFV+S I GF A +R + S II FR Sbjct: 3 PLLLEGAVVTVQLLVIAGILSFVMSFIGGFARLSRFAPVR-WVSGGIIEF--------FR 53 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GT LLVQLF ++Y LP +G+ S + I+ LTLN+ +Y SEI+RSSI++IPKGQ +A Sbjct: 54 GTSLLVQLFWLYYALPLLGVSLPSGLVGIVGLTLNYGSYGSEIVRSSILAIPKGQTEAGI 113 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+ +TR Q +R IILPQ + I +LK T++ S +TI ++ ++ +T Sbjct: 114 ALNMTRAQRMRSIILPQAFRIMLPSFGNLMIELLKGTALVSLVTISDMTLNVMQMRNTVG 173 Query: 187 QPLIIYCELAFVYLIL 202 I L Y I+ Sbjct: 174 HDTQILSLLLVAYFII 189 >gi|242309543|ref|ZP_04808698.1| ABC transporter [Helicobacter pullorum MIT 98-5489] gi|239524114|gb|EEQ63980.1| ABC transporter [Helicobacter pullorum MIT 98-5489] Length = 237 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/224 (31%), Positives = 129/224 (57%), Gaps = 14/224 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHF------ 60 I+DS + + ++ ++ ++ +I +++G +A++++ F+ I + +F Sbjct: 13 IVDSRYKYILEGLIFSISTTALAAIIGIVLGVVVALMQLTNFYPFRNIQALANFNPLSKI 72 Query: 61 ---YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII--ISLTLNFSAYISEIIRSSII 115 YV+I RGTP +VQL +I+ + IG + D + +I I+ +N SAY++EIIR+ I Sbjct: 73 AYAYVYIIRGTPAVVQL-MIWANIIFIGALRDMPILLIAAIAFGINSSAYVAEIIRAGIQ 131 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ KGQ +A+ A+G+ +++ II+PQ I PL SEFI++LK TS+ I ++ Sbjct: 132 SLDKGQMEAARALGMGYAMSMKEIIIPQAIKRILPPLVSEFIALLKETSIVGFIGGVDLL 191 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 ++A I S TY+ + + +YLILTS ++ K+E + + Sbjct: 192 RSASIITSQTYRAIEPLLAVGIIYLILTSLFAMLMRKVEKRLQE 235 >gi|227891436|ref|ZP_04009241.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] gi|227866583|gb|EEJ74004.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] Length = 501 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 62/187 (33%), Positives = 112/187 (59%), Gaps = 7/187 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I TL I +S +I ++G +A++R+ + + L + Y+ RGTPL+VQ+ +++ Sbjct: 302 GIEYTLIITVVSVLIGFVLGIILALMRLGHNKLLHGLAVA-YIEFIRGTPLMVQVMFVYF 360 Query: 80 GLPHIGIVFDSFVAI---IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 G IG V S A+ II+++LN AY++E+IRS I SI GQ +A+ ++G+++KQT Sbjct: 361 G---IGAVIQSLPALAAGIIAVSLNSGAYVAEVIRSGIESIAIGQTEAARSLGMSQKQTY 417 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +++++PQ I L +EFI+++K +S+ S I + ++ Q + S TY+ + Sbjct: 418 QYVVIPQAIKNIWPALGNEFITLIKESSIVSVIGVGDLMYQTQLVQSATYKGVAPLAITM 477 Query: 197 FVYLILT 203 +Y +LT Sbjct: 478 VIYFVLT 484 >gi|222102596|ref|YP_002539635.1| ABC transporter membrane spanning protein (nopaline) [Agrobacterium vitis S4] gi|221739197|gb|ACM39930.1| ABC transporter membrane spanning protein (nopaline) [Agrobacterium vitis S4] Length = 230 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 121/208 (58%), Gaps = 12/208 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + P+LL + + +TL +A S V ++ +A+++ ++ + F V +F Sbjct: 4 FGFFFEIIPKLL-SGLPLTLTLAGTSIVCGFVLALVLALVQQGERRWVVWPVRTF-VAVF 61 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVF---DSFVAIIISLTLNFSAYISEIIRSSII 115 RGTPLLVQ+F+I+YGL G+ + + + I++LTLN +AY SEI+R +I Sbjct: 62 RGTPLLVQIFLIYYGLGQFRPSLQAAGLWWLFREPYWCAILALTLNTAAYGSEILRGAIR 121 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P+G +A+ A+G++R +R IILP + + +E I ++K TS+AS IT+ E+ Sbjct: 122 NVPRGLIEAASALGMSRLANLRFIILPLALRQAIPAYGNEIILMVKGTSLASIITLMEVT 181 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 AQ ++S +Y+ + ++ +YL+L Sbjct: 182 GIAQGLISQSYRAIEVFMAAGAIYLLLN 209 >gi|55377278|ref|YP_135128.1| glutamine-binding periplasmic protein of glutamine ABC transporter [Haloarcula marismortui ATCC 43049] gi|55230003|gb|AAV45422.1| glutamine-binding periplasmic protein of glutamine ABC transporter [Haloarcula marismortui ATCC 43049] Length = 226 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 109/202 (53%), Gaps = 8/202 (3%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W ++D+ LL VT+ + S ++ IGF I ++ SD L+ V Sbjct: 10 DWL-FVVDNMG-LLLGGTAVTVALTVASILLGFAIGFPAGAIEVYGSDRARRLVEQVGV- 66 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLLV + ++++GL + +FV I+L L +AY S+I R ++ S+ GQ + Sbjct: 67 VLRGTPLLVIIMILYFGLS---VSSSAFVTATIALGLRSAAYQSQIFRGALQSVDDGQLE 123 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI-- 181 A+ A+ ++R + IRH+++PQ + S +EF +LK TS+A I I E+ T Q + Sbjct: 124 AARAVAMSRFEAIRHVVVPQALRRSVPGFQNEFTIVLKDTSIAIVIGIGELLTTGQNLYE 183 Query: 182 VSTTYQPLIIYCELAFVYLILT 203 + L I+ ++ VY +LT Sbjct: 184 GGQSTAALEIFLAVSLVYFVLT 205 >gi|167840985|ref|ZP_02467669.1| glutamine ABC transporter permease protein [Burkholderia thailandensis MSMB43] Length = 218 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 120/211 (56%), Gaps = 16/211 (7%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIA----CISFVISLIIGFFIAVIRIFFSDTIISL 56 M+++W + I + P L+ + +T+ IA F++ +I G F A + ++++ Sbjct: 1 MQFDW-SAIWAALPDLM-DGVRLTVFIAFFGLAGGFLVGMIAGMFRA-----YGPAVLNV 53 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + Y+ + RGTP++VQ+ +++ LP HI I D A I+++TLN AY++E++R + Sbjct: 54 LAQVYIELIRGTPIVVQVMFLYFALPLLAHIRI--DGLTAAIVAITLNSGAYLAEVVRGA 111 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++SIPKG +A A+GL+ + + I+ P PL ++ I LK TS+ I + E Sbjct: 112 LLSIPKGLTEAGLAMGLSMPRVLVKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGE 171 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 + + Q I++ +Q + I+ +A +YL+LT Sbjct: 172 LTRKGQEIIAGNFQAVEIWTAVAAIYLVLTG 202 >gi|166030980|ref|ZP_02233809.1| hypothetical protein DORFOR_00661 [Dorea formicigenerans ATCC 27755] gi|166029247|gb|EDR48004.1| hypothetical protein DORFOR_00661 [Dorea formicigenerans ATCC 27755] Length = 216 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 116/210 (55%), Gaps = 6/210 (2%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L +V +L I + + SL +G I+ R+ + IIS I Y+ + RGTPL++QL Sbjct: 8 QKLGEGMVTSLWIFAATLIFSLPLGLLISFGRMS-KNKIISTIFKLYISVMRGTPLMLQL 66 Query: 75 FVIFYGLPHI-GIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 VI++G +I G+ +A+ I LN++AY +EI R I S+P+GQ++A+ +G Sbjct: 67 MVIYFGPFYILGVQISQSWKNMAVAIGFVLNYAAYFAEIYRGGIESMPQGQYEAAKILGY 126 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T+ QT IILPQ I +++E I+++K TS+A TI + E+F A+ + S ++ Sbjct: 127 TKAQTFIRIILPQVIKRILPAITNETITLVKDTSLAFTIGVTEMFTMAKALASGQVS-ML 185 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y A Y IL I +IE + + Sbjct: 186 PYAFAALFYYILNLVVAFIMERIEKKMNYY 215 >gi|325263519|ref|ZP_08130253.1| amino acid ABC transporter, permease/substrate-binding protein [Clostridium sp. D5] gi|324031228|gb|EGB92509.1| amino acid ABC transporter, permease/substrate-binding protein [Clostridium sp. D5] Length = 224 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 112/198 (56%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN + + + +L + +T+ I VI L++G +A+++ S I+ + YV I Sbjct: 11 FNFL-NVYGDMLLDGMKMTVIIVAWCLVIGLVLGTVMALLKQSKSR-ILRMAATVYVDIL 68 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP LVQLF FYGLP +GI D+ II+L +N SA EIIR+ ++++ K ++ S Sbjct: 69 RNTPFLVQLFFFFYGLPALGIQTDAMATAIIALGINTSAQNCEIIRAGLLAVKKDYYECS 128 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G T+ QT+ + +LP + + L + FI+++ ++SV +IT+ E A+ IV T Sbjct: 129 EALGYTKIQTLWYFVLPISFRLAFKSLVNNFINLVLTSSVCFSITVVETMGAAKIIVGRT 188 Query: 186 YQPLIIYCELAFVYLILT 203 +P IY + Y I T Sbjct: 189 SRPFEIYLMILLCYCIFT 206 >gi|94988718|ref|YP_596819.1| histidine transport system permease protein [Streptococcus pyogenes MGAS9429] gi|94992541|ref|YP_600640.1| histidine transport system permease protein hisM [Streptococcus pyogenes MGAS2096] gi|94542226|gb|ABF32275.1| histidine transport system permease protein [Streptococcus pyogenes MGAS9429] gi|94546049|gb|ABF36096.1| Histidine transport system permease protein hisM [Streptococcus pyogenes MGAS2096] Length = 213 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 62/167 (37%), Positives = 102/167 (61%), Gaps = 4/167 (2%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL A+V TL + I ++S+ +G +A +++I F + + YVW+ RGTPLL+ Sbjct: 9 PSLLDGALV-TLQVFFIVIILSIPLGTILAFLMKIPFKP--LQWFLTLYVWMMRGTPLLL 65 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QL +Y LP +GI FD A I++ TLN++AY +EI R I +IPKGQ++A+ + L Sbjct: 66 QLIFFYYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKP 125 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 QTIR+IILPQ + +E I+++K +S+ + + ++ ++ Sbjct: 126 LQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASK 172 >gi|90962512|ref|YP_536428.1| amino acid ABC transporter [Lactobacillus salivarius UCC118] gi|90821706|gb|ABE00345.1| Amino acid ABC transporter [Lactobacillus salivarius UCC118] Length = 499 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 62/187 (33%), Positives = 112/187 (59%), Gaps = 7/187 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I TL I +S +I ++G +A++R+ + + L + Y+ RGTPL+VQ+ +++ Sbjct: 300 GIEYTLIITVVSVLIGFVLGIILALMRLGHNKLLHGLAVA-YIEFIRGTPLMVQVMFVYF 358 Query: 80 GLPHIGIVFDSFVAI---IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 G IG V S A+ II+++LN AY++E+IRS I SI GQ +A+ ++G+++KQT Sbjct: 359 G---IGAVIQSLPALAAGIIAVSLNSGAYVAEVIRSGIESIAIGQTEAARSLGMSQKQTY 415 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +++++PQ I L +EFI+++K +S+ S I + ++ Q + S TY+ + Sbjct: 416 QYVVIPQAIKNIWPALGNEFITLIKESSIVSVIGVGDLMYQTQLVQSATYKGVAPLAITM 475 Query: 197 FVYLILT 203 +Y +LT Sbjct: 476 VIYFVLT 482 >gi|157369178|ref|YP_001477167.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157320942|gb|ABV40039.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 221 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 108/191 (56%), Gaps = 2/191 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P+LL A ++ T+ + ++ +I + +G A IR ++ ++S + YV + R TP +V Sbjct: 14 LPELL-AGLLTTIELTALATLIGVALGICGAAIRSGKAN-LVSRVWGIYVEVVRNTPFVV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I +GLP +G + A ++++ +N AY +EIIR+ I PKGQW+A +GL+R Sbjct: 72 QLFFIVFGLPSLGWKLTAGQAALLAMVINLGAYSTEIIRAGIQVTPKGQWEAGRVLGLSR 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT I+LP ++ L S+ I ++ +SV S ++ E+ A I S T+ +Y Sbjct: 132 SQTFLRIVLPPSLQRIYPALVSQCIIVMLGSSVVSQVSFEELTFAANLIQSRTFLSFEVY 191 Query: 193 CELAFVYLILT 203 A YL+L+ Sbjct: 192 LVTALFYLLLS 202 >gi|110598078|ref|ZP_01386357.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Chlorobium ferrooxidans DSM 13031] gi|110340337|gb|EAT58831.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Chlorobium ferrooxidans DSM 13031] Length = 476 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 121/222 (54%), Gaps = 12/222 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K W +I +LL AA V L +A + +I++I+G +AV + + + Y Sbjct: 253 KLNWSEGLI----KLLKAASVTVL-LAFGAMIIAVILGIPLAVGQSN-GGPLTRALCTVY 306 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + FRGTP+LVQL +++GLP IGI ++ I+ L LN++AY S++ R++ +IP+ Q Sbjct: 307 IEFFRGTPVLVQLLFLYFGLPVIGITLPGWLTAIVGLGLNYAAYESQVYRTAFQAIPERQ 366 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W +Y++G+ R II PQ + P++++F+++ K TS A I + E+ TA R Sbjct: 367 WQVAYSLGMHPLLAFRRIIFPQAFRIALPPMTNDFVALFKDTSTAFAIAVWEL-ATAYRE 425 Query: 182 VSTTYQ-----PLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 ++ Q L++ C + L L + + ++ K++ T Sbjct: 426 LANATQSYLGIGLVVCCYYLAMSLPLAHYAHKLEQKLQRKST 467 >gi|19746201|ref|NP_607337.1| amino acid ABC transporter (permease protein) [Streptococcus pyogenes MGAS8232] gi|94994530|ref|YP_602628.1| histidine transport system permease protein hisM [Streptococcus pyogenes MGAS10750] gi|139473660|ref|YP_001128376.1| amino acid ABC transporter permease [Streptococcus pyogenes str. Manfredo] gi|306827253|ref|ZP_07460540.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pyogenes ATCC 10782] gi|19748383|gb|AAL97836.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes MGAS8232] gi|94548038|gb|ABF38084.1| Histidine transport system permease protein hisM [Streptococcus pyogenes MGAS10750] gi|134271907|emb|CAM30145.1| putative amino acid ABC transporter permease protein [Streptococcus pyogenes str. Manfredo] gi|304430400|gb|EFM33422.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pyogenes ATCC 10782] Length = 213 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 61/167 (36%), Positives = 102/167 (61%), Gaps = 4/167 (2%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL A+V TL + I ++S+ +G +A ++++ F + + YVW+ RGTPLL+ Sbjct: 9 PSLLDGALV-TLQVFFIVIILSIPLGAILAFLMKVPFKP--LQWFLTLYVWMMRGTPLLL 65 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QL +Y LP +GI FD A I++ TLN++AY +EI R I +IPKGQ++A+ + L Sbjct: 66 QLIFFYYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKP 125 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 QTIR+IILPQ + +E I+++K +S+ + + ++ ++ Sbjct: 126 LQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASK 172 >gi|300811765|ref|ZP_07092238.1| putative arginine ABC transporter, permease protein ArtQ [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|313124503|ref|YP_004034762.1| glutamine ABC transporter permease component [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|300497264|gb|EFK32313.1| putative arginine ABC transporter, permease protein ArtQ [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|312281066|gb|ADQ61785.1| Glutamine ABC transporter permease component [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 213 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 45/123 (36%), Positives = 81/123 (65%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +++FYVW+ RGTPLL+QL +FYGLP +G+ F ++A +++ LN++AY +EI R + Sbjct: 50 LLNFYVWLMRGTPLLLQLIFVFYGLPIVGLTFPRYMAALVAFVLNYTAYFAEIFRGGNQA 109 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ++A+ + LT QT+R I++PQ I + +E I+++K +S+ I + ++ + Sbjct: 110 IDRGQFEAAKVLQLTYGQTLRKIVIPQVIKIVLPSIGNEVINLVKDSSLVYVIGLGDLLR 169 Query: 177 TAQ 179 Sbjct: 170 AGN 172 >gi|227544923|ref|ZP_03974972.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300910049|ref|ZP_07127509.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] gi|227185090|gb|EEI65161.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300892697|gb|EFK86057.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] Length = 503 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 108/184 (58%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I TL I +S + ++G A++R+ + + I Y+ RGTP++VQ+ +++ Sbjct: 303 GIKYTLIITVVSVIFGFLLGTLFALMRLS-KNKFLHSIAVCYIEFLRGTPMMVQIMFVYF 361 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G+ I + +A II+++LN AY++EIIRS I SIP GQ +A+ ++G+++ +T R++ Sbjct: 362 GIGAIIQSLPALLAGIIAVSLNSGAYVAEIIRSGIQSIPLGQTEAARSLGMSKSETFRYV 421 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I+PQ + L +E I++LK +S+ S I + E+ Q + S TY+ ++ +Y Sbjct: 422 IMPQALKNIWPALGNELITLLKDSSLVSVIGVSELMYQTQLVQSATYKGVLPLFITMIIY 481 Query: 200 LILT 203 ILT Sbjct: 482 FILT 485 >gi|209559563|ref|YP_002286035.1| Glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pyogenes NZ131] gi|209540764|gb|ACI61340.1| Glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pyogenes NZ131] Length = 724 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 57/168 (33%), Positives = 98/168 (58%), Gaps = 7/168 (4%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYI 106 + LI +V + RG PL++ IF+G+P++ + F+A I+L+LN AYI Sbjct: 553 LRLISTVFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGGAYI 612 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EI+R I ++P GQ +AS ++GL+ T+R +ILPQ + ++F+ LK T++ Sbjct: 613 AEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLKDTTIV 672 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S I + E+FQT + I++ YQ +Y LA +YLI+ + + ++E Sbjct: 673 SAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLE 720 >gi|253690355|ref|YP_003019545.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756933|gb|ACT15009.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 227 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 61/182 (33%), Positives = 109/182 (59%), Gaps = 5/182 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ FPQ+L + TL +A +S ++++G +A++R ++ I+ Y+ +FRG Sbjct: 12 LLKVFPQVLMY-LPTTLFLAVVSMFFAMVLGLILALVRESKI-VVVVKIVELYISLFRGI 69 Query: 69 PLLVQLFVIFYGLPHI--GIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 P LVQLF+I++GLP + G+ D+ A II +L SAY++EI R+ + S+ GQ +A Sbjct: 70 PSLVQLFIIYFGLPQLFPGLSNLDAMTAAIIGFSLKTSAYMAEIFRAGLSSVDFGQTEAG 129 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IG+++ Q R I+LPQ + + + FIS++K TSVA + + E+F + I + + Sbjct: 130 LSIGMSKAQVYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFAEGKMIAAES 189 Query: 186 YQ 187 + Sbjct: 190 LR 191 >gi|227530173|ref|ZP_03960222.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] gi|227349926|gb|EEJ40217.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] Length = 217 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 117/206 (56%), Gaps = 11/206 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W N+ + L + +T+ I+ S + S IIG + +IR + +S I+ F + Sbjct: 8 YSWVNI------RFLLQGLGITIEISVASIICSFIIGTLLGIIR-YAKIKYVSAIVGFII 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + R PLL+ +F ++GLP+IG+ + A I++LT+ S+ ++EI+RS I SI Q Sbjct: 61 DLIRNLPLLLIIFFTYFGLPNIGVKPEIIPAAIMALTVFESSMVAEIVRSGINSIDYAQT 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + A GLT+ Q +R I+LPQ I L S+FIS++K TS+A+ I +PE+ AQ I Sbjct: 121 EGALANGLTKWQALRLIVLPQAIKNMLPALVSQFISLVKDTSLATIIVLPELMYHAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLILTSFCY 207 +I ++ LA +Y I+ CY Sbjct: 181 GQNTNYIIPMFVALAVLYFIV---CY 203 >gi|184153353|ref|YP_001841694.1| amino acid ABC transporter substrate binding and permease components [Lactobacillus reuteri JCM 1112] gi|183224697|dbj|BAG25214.1| amino acid ABC transporter substrate binding and permease components [Lactobacillus reuteri JCM 1112] Length = 443 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 108/184 (58%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I TL I +S + ++G A++R+ + + I Y+ RGTP++VQ+ +++ Sbjct: 243 GIKYTLIITVVSVIFGFLLGTLFALMRLS-KNKFLHSIAVCYIEFLRGTPMMVQIMFVYF 301 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G+ + + +A II+++LN AY++EIIRS I SIP GQ +A+ ++G+++ +T R++ Sbjct: 302 GIGALIQSLPALLAGIIAVSLNSGAYVAEIIRSGIQSIPLGQTEAARSLGMSKNETFRYV 361 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I+PQ + L +E I++LK +S+ S I + E+ Q + S TY+ ++ +Y Sbjct: 362 IMPQALKNIWPALGNELITLLKDSSLVSVIGVSELMYQTQLVQSATYKGVLPLFITMIIY 421 Query: 200 LILT 203 ILT Sbjct: 422 FILT 425 >gi|153011816|ref|YP_001373029.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151563704|gb|ABS17200.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 216 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 54/159 (33%), Positives = 98/159 (61%), Gaps = 3/159 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +S + YV +F+GTPLL+QLF++++GL IG+ +A + L + SAY++E Sbjct: 50 LSRPISLYVSVFQGTPLLMQLFLVYFGLALIGLQTTPLLAASLCLWIYSSAYLTETWYGC 109 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 +++IPKGQW+AS ++GL +R IILPQ + S P + ++K+TS+AS + E Sbjct: 110 VLAIPKGQWEASSSLGLKSWPQMRLIILPQAVRISVPPTVGILVQVVKNTSLASIVGFVE 169 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIK 212 + + +Q I + T++P ++Y ++ +Y ++ C+ I + Sbjct: 170 LTRASQMIANATFEPFLVYGAVSLIYFVI---CFSISLG 205 >gi|282849230|ref|ZP_06258615.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745] gi|282580934|gb|EFB86332.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745] Length = 218 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 57/171 (33%), Positives = 100/171 (58%), Gaps = 4/171 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ + CI +++S+ G +A++R+ + L+ F V++ RGTPL++Q+ ++Y Sbjct: 15 GLKVTVSLFCIVWILSIPGGILMAMLRLSKLPLVDKLVDAF-VYLMRGTPLMLQILFVYY 73 Query: 80 GLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 LP I I D A +++ LN++AY+ EI R I SI +GQ++ + +G T QT+ Sbjct: 74 ALPIITDGAIQMDDATAAVLTFVLNYAAYLCEIFRGGIQSISRGQYEGAKVLGFTYAQTM 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 R IILPQ PL++E I++LK TS+ + + +I + + IV + Sbjct: 134 RKIILPQMFKRVLPPLANETINLLKDTSLVYVLAMNDILRITKSIVQRDFD 184 >gi|170690740|ref|ZP_02881906.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170143989|gb|EDT12151.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 218 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 118/207 (57%), Gaps = 8/207 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W +I + P L+ + +T+ IA + + I+G R + +++I Sbjct: 1 MEFDW-TVIWSALPDLI-DGVELTVFIAFVGLIGGFIVGVVAGTCRAY-GPLALNVIAQV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 YV + RGTP++VQ+ +++ LP H+ I D A II++T+N AY++E++R +++SI Sbjct: 58 YVELIRGTPIVVQVMFLYFALPLLAHLRI--DGLTAAIIAITVNSGAYLAEVVRGALLSI 115 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKG +A A+GL+ + + II P PL ++ I LK TS+ I + E+ + Sbjct: 116 PKGLMEAGLAMGLSTPRVLMKIIGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRK 175 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTS 204 Q I+++ ++ + I+ +A +YL+LT Sbjct: 176 GQEIIASNFRAVEIWSAVAVIYLVLTG 202 >gi|325526097|gb|EGD03757.1| glutamine ABC transporter permease protein [Burkholderia sp. TJI49] Length = 218 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 116/207 (56%), Gaps = 8/207 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++W + I + P L+ + +T+ IA V ++G + R + ++++ Sbjct: 1 MNFDW-SAIWTALPDLM-DGVRLTVFIAFFGLVGGFVVGMIAGMFRAY-GPKAMNVLAQV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 Y+ + RGTP++VQ+ +++ LP HI I D A II++T+N AY++E++R +++SI Sbjct: 58 YIELIRGTPIVVQVMFLYFALPLLAHIRI--DGLTAAIIAITVNSGAYLAEVVRGALLSI 115 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKG +A A+GL+ + + I+ P PL ++ I LK TS+ I + E+ + Sbjct: 116 PKGLTEAGLAMGLSMPRVLLKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRK 175 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTS 204 Q I++ +Q + I+ +A +YLILT Sbjct: 176 GQEIIAGNFQAVEIWSAVAVIYLILTG 202 >gi|196042407|ref|ZP_03109669.1| amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] gi|196026753|gb|EDX65398.1| amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] Length = 219 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 121/215 (56%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I +S ++ I+G +A+ +I + ++ Y IF Sbjct: 5 FSAITPSIPYIL-KGLEVTLKIVAVSALVGFILGTLLALCKIARIRAL-NIAADLYTSIF 62 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P I G +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 63 RGTPLVLQLMIIYFGVPQIIGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 123 AMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y +L ++ IE + + Sbjct: 183 TFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKK 217 >gi|86358032|ref|YP_469924.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86282134|gb|ABC91197.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 268 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 68/202 (33%), Positives = 117/202 (57%), Gaps = 17/202 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ +A ++ I L+IGF +A+ + + + L Y IFRG P L+ LF+I+Y Sbjct: 52 GLQVTVSVAIVTLPIGLVIGFLVALGQQS-EEKSLRLAAGIYTTIFRGLPELLTLFIIYY 110 Query: 80 GL-----------PHIG--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G+ ++G + ++F+A +I+L++ FSAY SE++ S+ +IPKGQ++A Sbjct: 111 GMQMLIQSLLELAGYVGPPVEINAFLAGVIALSVVFSAYCSEVLLSAFRAIPKGQYEAGD 170 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL R +T+R +ILPQ + + L++ ++ +LK TS S I++ +I + V T Sbjct: 171 SLGLHRGRTLRLVILPQLVRIALPGLTNLWMVLLKDTSYVSIISLADILRQTSVAVRVTK 230 Query: 187 QPLIIY---CELAFVYLILTSF 205 +P Y C L V IL+SF Sbjct: 231 EPFFFYGIACCLYLVLAILSSF 252 >gi|16804386|ref|NP_465871.1| hypothetical protein lmo2348 [Listeria monocytogenes EGD-e] gi|47096046|ref|ZP_00233648.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 1/2a F6854] gi|224499027|ref|ZP_03667376.1| hypothetical protein LmonF1_04718 [Listeria monocytogenes Finland 1988] gi|224503522|ref|ZP_03671829.1| hypothetical protein LmonFR_13617 [Listeria monocytogenes FSL R2-561] gi|254826827|ref|ZP_05231514.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165] gi|254831227|ref|ZP_05235882.1| hypothetical protein Lmon1_07712 [Listeria monocytogenes 10403S] gi|254901126|ref|ZP_05261050.1| hypothetical protein LmonJ_14968 [Listeria monocytogenes J0161] gi|254914024|ref|ZP_05264036.1| amino acid ABC transporter [Listeria monocytogenes J2818] gi|254938339|ref|ZP_05270036.1| amino acid ABC transporter [Listeria monocytogenes F6900] gi|255028990|ref|ZP_05300941.1| hypothetical protein LmonL_07146 [Listeria monocytogenes LO28] gi|284802789|ref|YP_003414654.1| hypothetical protein LM5578_2546 [Listeria monocytogenes 08-5578] gi|284995931|ref|YP_003417699.1| hypothetical protein LM5923_2496 [Listeria monocytogenes 08-5923] gi|16411836|emb|CAD00426.1| lmo2348 [Listeria monocytogenes EGD-e] gi|47015643|gb|EAL06574.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 1/2a F6854] gi|258599205|gb|EEW12530.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165] gi|258610951|gb|EEW23559.1| amino acid ABC transporter [Listeria monocytogenes F6900] gi|284058351|gb|ADB69292.1| hypothetical protein LM5578_2546 [Listeria monocytogenes 08-5578] gi|284061398|gb|ADB72337.1| hypothetical protein LM5923_2496 [Listeria monocytogenes 08-5923] gi|293592042|gb|EFG00377.1| amino acid ABC transporter [Listeria monocytogenes J2818] Length = 238 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 71/227 (31%), Positives = 124/227 (54%), Gaps = 15/227 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +I D P L + +TL I +S + I+G +++ RI+ I+ Y+ FR Sbjct: 8 KMIADFIPTLA-GYLPITLYILALSLIFGFILGVLLSLPRIY-KVPILDQFARVYISFFR 65 Query: 67 GTPLLVQLFVIFYGLPHIGIVF-------DSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 GTP++VQLF++FYG+P + VF D A I + L+ +A I+E+IR+ + S+ Sbjct: 66 GTPIMVQLFIVFYGIPALSSVFGIDLSQMDPLYAAIATYALSSAATIAEVIRAGVNSVDA 125 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+Y+IGL+ +QT IILPQ + + + I LK TS+A +I + ++ Q Sbjct: 126 GQAEAAYSIGLSSRQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQ 185 Query: 180 RIVSTTYQPLIIYCELAFVY-----LILTSFCYIIQIKIESSVTQHT 221 +++ + L +Y L+ +Y L+ SF + I+ +++ T+ T Sbjct: 186 TLITLSNHALEVYISLSIIYYLTAVLLEYSFKW-IEKRVKKENTRFT 231 >gi|317492650|ref|ZP_07951077.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919400|gb|EFV40732.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 238 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 76/227 (33%), Positives = 121/227 (53%), Gaps = 15/227 (6%) Query: 5 WFNLI-IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W +LI D F + I +TL + S V+ I+ F +V R+ IS+ + + W Sbjct: 9 WKSLIWTDGFR---FTGIAITLWLLIASVVMGGILAVFFSVARVS-PKRWISMPVWLFTW 64 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSS 113 +FRGTPL VQL V + G+ + IV ++F +++LTLN AY +EI + Sbjct: 65 VFRGTPLYVQLLVFYSGMYTLEIVKGTEMLNAFFRSGLNCTLLALTLNTCAYTTEIFAGA 124 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++P G+ +A+ A G +R + R IILP + T+ S+E I +L ST++A T T+P+ Sbjct: 125 IRAVPHGEIEAANAYGFSRFKLYRCIILPSALRTALPAYSNEVILMLHSTALAFTATVPD 184 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + + A+ I S TYQP + A +YLI++ + K E H Sbjct: 185 LLKVARDINSATYQPFTAFGIAAVLYLIISYVLIRLFRKAEKRWMAH 231 >gi|291542412|emb|CBL15522.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Ruminococcus bromii L2-63] Length = 216 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 51/122 (41%), Positives = 78/122 (63%), Gaps = 3/122 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 +VWI RGTPL++QLFV+FY P + + F A +I+ +N++AY SEI R I S+ Sbjct: 54 FVWIIRGTPLMLQLFVVFYVPPLVSNGSVTFARMNAALIAFIINYAAYFSEIFRGGIESV 113 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKGQ++A +G+T+ Q I+L Q + P+ +E I+++K TS++S I IPEI Sbjct: 114 PKGQYEAGQVLGMTKGQIFFKIVLLQVVKKITAPMGNEIITLVKDTSLSSVIAIPEILMR 173 Query: 178 AQ 179 A+ Sbjct: 174 AK 175 >gi|291616399|ref|YP_003519141.1| GlnQ [Pantoea ananatis LMG 20103] gi|291151429|gb|ADD76013.1| GlnQ [Pantoea ananatis LMG 20103] gi|327392843|dbj|BAK10265.1| glutamine transport ATP-binding protein GlnQ GlnQ [Pantoea ananatis AJ13355] Length = 519 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 78/233 (33%), Positives = 130/233 (55%), Gaps = 15/233 (6%) Query: 1 MKYEW---FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI 57 M + W F+L D+ + A + ++ +++ +S+I GF +A+ + +++L Sbjct: 13 MTFNWNYMFSLFSDAN---FWLATWTVIKLSLLTWGMSIIAGFILALAKQS-RHPLLTLP 68 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRS 112 FY+W+FR PLLV L + Y LP I+ D F A I+LT+ SAYI+EI R Sbjct: 69 ARFYIWLFRSLPLLV-LLIFVYNLPQAVPATSAILSDPFWAGFIALTICESAYIAEIHRG 127 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 ++SIP+GQ +A+ A+GL II+PQ + + L++E+I+I+K TS+ S I++ Sbjct: 128 GLLSIPRGQSEAARALGLRYAGIQWRIIIPQALRVALPALANEYIAIVKLTSLVSVISLT 187 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVY-LILTSFCYII-QIKIESSVTQHTYS 223 EI QR+ S + + +AF Y LI+T F +++ Q++ VTQ S Sbjct: 188 EILMVGQRLYSQNFLVMETMAAVAFYYVLIVTVFDFLLKQLERYLDVTQRQPS 240 >gi|209546985|ref|YP_002278903.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538229|gb|ACI58163.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 248 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 114/201 (56%), Gaps = 14/201 (6%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + P+ L + +T FVIS+ + F A + +++ Y + FRGTPLL Sbjct: 12 TLPRGLALTLALTFASLAAGFVISVPLAFLRASPNPWAFAPVLA-----YTYAFRGTPLL 66 Query: 72 VQLFVIFYGLPHIGIVFDSFVAII---------ISLTLNFSAYISEIIRSSIISIPKGQW 122 VQLF+I+YG+ + V SF+ + I+ TLN +A+ +E++R I ++P GQ Sbjct: 67 VQLFLIYYGIGQLPFVRQSFLWAVMREPFWCAFIAFTLNSAAHTTEVLRGGIQTVPLGQI 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A+GL+R +R I+ P I + +E I +LK++S+ASTIT+ EI A+++V Sbjct: 127 EAAKALGLSRLHVMRLIVFPLAIRIALPAYVNEVIGMLKASSLASTITLLEITGIARQLV 186 Query: 183 STTYQPLIIYCELAFVYLILT 203 S T+ P ++ +YL+LT Sbjct: 187 SETFAPYEVFIVAGSLYLLLT 207 >gi|148543958|ref|YP_001271328.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri DSM 20016] gi|227364871|ref|ZP_03848917.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|325682504|ref|ZP_08162021.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] gi|148530992|gb|ABQ82991.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus reuteri DSM 20016] gi|227070075|gb|EEI08452.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|324978343|gb|EGC15293.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] Length = 503 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 108/184 (58%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I TL I +S + ++G A++R+ + + I Y+ RGTP++VQ+ +++ Sbjct: 303 GIKYTLIITVVSVIFGFLLGTLFALMRLS-KNKFLHSIAVCYIEFLRGTPMMVQIMFVYF 361 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G+ + + +A II+++LN AY++EIIRS I SIP GQ +A+ ++G+++ +T R++ Sbjct: 362 GIGALIQSLPALLAGIIAVSLNSGAYVAEIIRSGIQSIPLGQTEAARSLGMSKNETFRYV 421 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I+PQ + L +E I++LK +S+ S I + E+ Q + S TY+ ++ +Y Sbjct: 422 IMPQALKNIWPALGNELITLLKDSSLVSVIGVSELMYQTQLVQSATYKGVLPLFITMIIY 481 Query: 200 LILT 203 ILT Sbjct: 482 FILT 485 >gi|331091628|ref|ZP_08340462.1| hypothetical protein HMPREF9477_01105 [Lachnospiraceae bacterium 2_1_46FAA] gi|330403385|gb|EGG82944.1| hypothetical protein HMPREF9477_01105 [Lachnospiraceae bacterium 2_1_46FAA] Length = 229 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 109/190 (57%), Gaps = 6/190 (3%) Query: 5 WFNLIIDSFPQLLY-AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT--IISL--IMH 59 ++N +I L+Y + VT+ I+ + I + IG IAVI++ S+ ++ L + + Sbjct: 11 FYNAVIYDQRYLVYLDGLKVTILISLFAIAIGVAIGLLIAVIKVSASEKKVLVGLKWLCN 70 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + RGTP++VQL +I Y L + V I +N AY++EIIR+ I SI K Sbjct: 71 VYITVIRGTPVMVQLLII-YNLVFTARDTNEIVVGAICFGINSGAYVAEIIRAGIESIDK 129 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A ++G QT+R+II+PQ I LS+EFI ++K TSVA I + ++ + AQ Sbjct: 130 GQMEAGRSLGFNYIQTMRYIIVPQAIKNILPALSNEFIVLIKETSVAGIIAVTDLTKAAQ 189 Query: 180 RIVSTTYQPL 189 I ST Y L Sbjct: 190 YIGSTDYNIL 199 >gi|195978013|ref|YP_002123257.1| amino acid ABC transporter membrane-spanning permease [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974718|gb|ACG62244.1| amino acid ABC transporter membrane-spanning permease [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 209 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 57/167 (34%), Positives = 102/167 (61%), Gaps = 4/167 (2%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVI-RIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL A++ TL + I V+S+ +G +A + R+ F + ++ Y+W+ RGTPLL+ Sbjct: 5 PSLLDGALI-TLQVFFIVIVLSIPLGALLAFLTRVDFKP--LQWLLTLYIWVMRGTPLLL 61 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QL +Y LP +G+ FD A I++ TLN++AY +EI R I +IP GQ++A+ + L+ Sbjct: 62 QLIFFYYVLPSVGVTFDRMPAAILAFTLNYAAYFAEIFRGGIETIPNGQYEAAKVLKLSP 121 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 QT+R++ILPQ + +E I+++K +S+ + + ++ ++ Sbjct: 122 VQTVRYVILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASK 168 >gi|148653869|ref|YP_001280962.1| polar amino acid ABC transporter inner membrane subunit [Psychrobacter sp. PRwf-1] gi|148572953|gb|ABQ95012.1| polar amino acid ABC transporter, inner membrane subunit [Psychrobacter sp. PRwf-1] Length = 241 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 80/230 (34%), Positives = 126/230 (54%), Gaps = 13/230 (5%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + W +I P LL + +V+T + IS V+ L G +A++R+ S + ++ Sbjct: 1 MDWNW-QVIFTYLPDLL-SGVVLTTQLVVISGVLGLFFGLGLALLRLSASRWV-QVLPFL 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEII 110 Y++ FRGTPLLVQ+F+I+YGL + DS F II+ TLN SAY +EII Sbjct: 58 YIFFFRGTPLLVQIFLIYYGLSQFEFIKDSALWEPVLKQPFWCAIIAFTLNTSAYTAEII 117 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R +I SIP G+ +A+ AIG++R Q + I LP+ S+E I +LK +S+A TI Sbjct: 118 RGAIQSIPPGELEAADAIGMSRWQKLTRITLPRAFGIMLPAYSNEVIFMLKGSSLAMTIA 177 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + +I A+ I + TY +Y +YL+L+ + +E + +H Sbjct: 178 LMDITGIAKTISARTYTIFELYFAAGLIYLVLSWVILLTFRFLEKRMNRH 227 >gi|71903722|ref|YP_280525.1| transporter [Streptococcus pyogenes MGAS6180] gi|71802817|gb|AAX72170.1| transporter [Streptococcus pyogenes MGAS6180] Length = 724 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 58/168 (34%), Positives = 98/168 (58%), Gaps = 7/168 (4%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYI 106 + LI +V I RG PL++ IF+G+P++ + F+A I+L+LN AYI Sbjct: 553 LRLISTVFVDIVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGGAYI 612 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EI+R I ++P GQ +AS ++GL+ T+R +ILPQ + ++F+ LK T++ Sbjct: 613 AEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLKDTTIV 672 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S I + E+FQT + I++ YQ +Y LA +YLI+ + + ++E Sbjct: 673 SAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLE 720 >gi|53715883|ref|YP_106604.1| glutamine ABC transporter permease protein [Burkholderia mallei ATCC 23344] gi|53723353|ref|YP_112338.1| glutamine ABC transporter permease protein [Burkholderia pseudomallei K96243] gi|76817724|ref|YP_336643.1| glutamine ABC transporter permease [Burkholderia pseudomallei 1710b] gi|254356207|ref|ZP_04972484.1| glutamine ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|52213767|emb|CAH39822.1| glutamine transport system permease protein [Burkholderia pseudomallei K96243] gi|52421853|gb|AAU45423.1| glutamine ABC transporter, permease protein [Burkholderia mallei ATCC 23344] gi|76582197|gb|ABA51671.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 1710b] gi|148025190|gb|EDK83359.1| glutamine ABC transporter, permease protein [Burkholderia mallei 2002721280] Length = 218 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 120/211 (56%), Gaps = 16/211 (7%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIA----CISFVISLIIGFFIAVIRIFFSDTIISL 56 M+++W + I + P L+ + +T+ IA F++ +I G F A + ++++ Sbjct: 1 MQFDW-SAIWAALPDLM-DGVRLTVFIAFFGLAGGFLVGMIAGMFRA-----YGPAVLNV 53 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + Y+ + RGTP++VQ+ +++ LP H+ I D A ++++TLN AY++E++R + Sbjct: 54 LAQVYIELIRGTPIVVQVMFLYFALPLLAHVRI--DGLSAAVVAITLNSGAYLAEVVRGA 111 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++SIPKG +A A+GL+ + + I+ P PL ++ I LK TS+ I + E Sbjct: 112 LLSIPKGLTEAGLAMGLSMPRVLVKIVGPLAFRRLIAPLGNQCIVSLKDTSLFIVIGVGE 171 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 + + Q I++ +Q + I+ +A +YL+LT Sbjct: 172 LTRKGQEIIAGNFQAVEIWTAVAAIYLVLTG 202 >gi|212704549|ref|ZP_03312677.1| hypothetical protein DESPIG_02609 [Desulfovibrio piger ATCC 29098] gi|212671948|gb|EEB32431.1| hypothetical protein DESPIG_02609 [Desulfovibrio piger ATCC 29098] Length = 223 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 64/197 (32%), Positives = 109/197 (55%), Gaps = 5/197 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I + Q L +I + +P + + FV + +G A F S + ++Y I RG Sbjct: 12 VIPALNQGLKVSIALIVPASILGFVGGVALGCLRA-----FGGPWSSRLGNWYTAIIRGV 66 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PL VQL +I+Y LP +GI F+ + A ++S L +AY SE IR +++SI +GQ A+ A+ Sbjct: 67 PLAVQLMMIYYALPKMGIYFEPYGAALLSFILCSAAYHSEYIRGALLSIRQGQIKAAQAL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+T QT+ I++PQ + +E I ++K +S+A +T E+ A+ + S T++ Sbjct: 127 GMTTFQTVFWIVIPQAARRALPGCGNEIIYLIKYSSLAMLVTCNELMSEAKVLASDTFRN 186 Query: 189 LIIYCELAFVYLILTSF 205 ++ + YLIL S Sbjct: 187 TEVFLAVGLYYLILVSL 203 >gi|28897775|ref|NP_797380.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD 2210633] gi|153837351|ref|ZP_01990018.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AQ3810] gi|260363800|ref|ZP_05776555.1| octopine transport system permease protein OccM [Vibrio parahaemolyticus K5030] gi|260876940|ref|ZP_05889295.1| octopine transport system permease protein OccM [Vibrio parahaemolyticus AN-5034] gi|260897918|ref|ZP_05906414.1| octopine transport system permease protein OccM [Vibrio parahaemolyticus Peru-466] gi|28805988|dbj|BAC59264.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus RIMD 2210633] gi|149749382|gb|EDM60155.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AQ3810] gi|308085473|gb|EFO35168.1| octopine transport system permease protein OccM [Vibrio parahaemolyticus Peru-466] gi|308093859|gb|EFO43554.1| octopine transport system permease protein OccM [Vibrio parahaemolyticus AN-5034] gi|308113895|gb|EFO51435.1| octopine transport system permease protein OccM [Vibrio parahaemolyticus K5030] Length = 225 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 116/203 (57%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LII+SFP + + + T+ + IS VI L + +A+ R ++ +SL +++ F Sbjct: 3 FSLIIESFP-VYFQGLWTTVWLVGISLVIGLCVSVPLAIARNS-TNYALSLPSWGFIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQFFPVKDTLWEHAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G+++ T + IILP + + S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMSKFMTYKRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIVDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFESFLTAGLFYMSLT 203 >gi|107026631|ref|YP_624142.1| glutamine ABC transporter permease protein [Burkholderia cenocepacia AU 1054] gi|116692179|ref|YP_837712.1| glutamine ABC transporter permease protein [Burkholderia cenocepacia HI2424] gi|105896005|gb|ABF79169.1| L-glutamine ABC transporter membrane protein [Burkholderia cenocepacia AU 1054] gi|116650179|gb|ABK10819.1| L-glutamine ABC transporter membrane protein [Burkholderia cenocepacia HI2424] Length = 235 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 116/206 (56%), Gaps = 8/206 (3%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++W + I + P L+ + +T+ IA + V I+G + R + ++++ Y Sbjct: 19 NFDW-SAIWAALPDLM-DGVRLTVFIALLGLVGGFIVGMIAGMFRAY-GPKAMNVLAQVY 75 Query: 62 VWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 + + RGTP++VQ+ +++ LP HI I D A II++T+N AY++E++R +++SIP Sbjct: 76 IELIRGTPIVVQVMFLYFALPLLAHIRI--DGLTAAIIAITVNSGAYLAEVVRGALLSIP 133 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+ + + I+ P PL ++ I LK TS+ I + E+ + Sbjct: 134 KGLTEAGLAMGLSMPRVLLKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRKG 193 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTS 204 Q I++ +Q + I+ +A +YLILT Sbjct: 194 QEIIAGNFQAVEIWSAVAVIYLILTG 219 >gi|172057718|ref|YP_001814178.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sibiricum 255-15] gi|171990239|gb|ACB61161.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sibiricum 255-15] Length = 214 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 65/191 (34%), Positives = 114/191 (59%), Gaps = 3/191 (1%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 +FP L + +TL I I+ ++ +IG +A++R+ I++ I Y+ + RGTP + Sbjct: 7 AFPFFL-EGLQITLYIFIIAVIVGFLIGLIVALMRLS-PLKILNGIAIVYIDVIRGTPFI 64 Query: 72 VQLFVIFYGLPHIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 VQLF I++GL + + D A I+++ +N AY +EIIR+ I SI KGQ +A+ ++G+ Sbjct: 65 VQLFFIYFGLNSLEWLSMDRMYAGILTVAINAGAYFAEIIRAGIQSIDKGQTEAARSLGM 124 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T +QT+ I+LPQ ++++ I LK TS+ S I I ++ Q Q +TT++P I Sbjct: 125 TGRQTMTQIVLPQAFRRMLPTITNQSIISLKDTSLLSIIGIADLTQQGQVQQATTFEPFI 184 Query: 191 IYCELAFVYLI 201 ++ + +Y + Sbjct: 185 VWTVVGLMYFV 195 >gi|330957139|gb|EGH57399.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 215 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 55/151 (36%), Positives = 94/151 (62%), Gaps = 3/151 (1%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I Y+ +F+GTPLL+QLF++F+G+ +G+ + A ++LTL SAY++EI R + S Sbjct: 51 IAKLYIELFQGTPLLMQLFLVFFGVALMGMNISPWAAAALALTLFTSAYLAEIWRGCVES 110 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I KGQW+AS ++ +T + +R++ILPQ + + P + ++K T+V S I E+ + Sbjct: 111 ISKGQWEASASLAMTPLEQMRYVILPQALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTK 170 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 T + + T++P ++Y +A Y IL CY Sbjct: 171 TGSMLANATFEPFMVYGFVALGYFIL---CY 198 >gi|328544438|ref|YP_004304547.1| ABC transporter permease [polymorphum gilvum SL003B-26A1] gi|326414180|gb|ADZ71243.1| ABC transporter, permease protein, putative [Polymorphum gilvum SL003B-26A1] Length = 272 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 114/208 (54%), Gaps = 12/208 (5%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 VT+ + +S ++ IA+ R + ++ + YV+ FRGTPLL Q F+I+YG Sbjct: 64 VTIQLVVLSIAAGALLSVPIALARSM-RNPVVRGLAFAYVYFFRGTPLLAQTFLIYYGAG 122 Query: 81 -----LPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 L G+ + D++ I+ + TLN SAY +EI+R ++ ++P+GQW+ + A+GL R Sbjct: 123 SFRDGLEAAGLWWFFRDAWYCILFAFTLNTSAYQAEILRGAVENVPRGQWEGAMALGLPR 182 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 IILPQ + + P +E I ++K +++AS +TI ++ +R S + Y Sbjct: 183 PVIFFRIILPQALIVALRPYGNEIILMIKGSAIASIVTIFDLMGETRRAFSRSLD-FQAY 241 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQH 220 A +YLI+ + ++E+ +T+H Sbjct: 242 IWAAVLYLIIVETLRRVWDRLEARLTRH 269 >gi|324328060|gb|ADY23320.1| amino acid ABC transporter permease [Bacillus thuringiensis serovar finitimus YBT-020] Length = 219 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 120/215 (55%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I +S + I+G +A+ +I + ++ Y IF Sbjct: 5 FSAITPSIPYIL-KGLEVTLKIVAVSALAGFILGTLLALCKIARIRAL-NIAADLYTSIF 62 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P I G +FVA +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 63 RGTPLVLQLMIIYFGVPQIIGYEIPAFVAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 123 AMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y +L ++ IE + + Sbjct: 183 TFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKK 217 >gi|269977205|ref|ZP_06184178.1| ABC-type amino acid transport system, permease component [Mobiluncus mulieris 28-1] gi|269934508|gb|EEZ91069.1| ABC-type amino acid transport system, permease component [Mobiluncus mulieris 28-1] Length = 302 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 18/229 (7%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 Y W + F + I TL + + I +++ +A++R + ++ + FY Sbjct: 41 NYHWDKVWEYLFHPTIIRGIGFTLVLTVAAMFIGVVLAVTMAIMRQS-PNPVLKSVAWFY 99 Query: 62 VWIFRGTPLLVQLFVIFYGL-----PHIGI---------VFDSFVAIIISLTLNFSAYIS 107 +W FRGTP+ QL IF+GL P +G+ V++ A I+ L LN AY++ Sbjct: 100 IWFFRGTPIYTQL--IFWGLLPTLYPFVGVGVFKIDINVVWNVLWAAILGLGLNEGAYLA 157 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 EI+R+ + S+ GQW+A+ A+G+ R +R IILPQ + P +E IS+LK+TS+ S Sbjct: 158 EIVRAGLNSVDPGQWEAATALGMKRSLIMRRIILPQAMRVIVPPTGNETISMLKTTSLVS 217 Query: 168 TITIP-EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + E+ AQ + + P+ + A YL++TS + Q +E Sbjct: 218 AVPFTMELTFAAQALGRQIFMPVPMLISAAIWYLVVTSILMVGQFYLEK 266 >gi|86609572|ref|YP_478334.1| cystine ABC transporter, permease protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558114|gb|ABD03071.1| cystine ABC transporter, permease protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 248 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 83/127 (65%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +S + YV + RGTPL +Q I+ LP +G+VF SF + +++L+LN+ AY+SEI R+ Sbjct: 83 LSSLSALYVSLMRGTPLFLQFLFIYQALPQLGLVFGSFTSAVLALSLNYGAYMSEIFRAG 142 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I +IP GQ +A+YA+GL QT+ IILPQ + ++FI++ K T++AS I + E Sbjct: 143 IQAIPIGQREAAYALGLKPWQTLWCIILPQAFRIVLPDIGNQFIAMQKDTALASAIALQE 202 Query: 174 IFQTAQR 180 + A++ Sbjct: 203 LMGRARQ 209 >gi|86605398|ref|YP_474161.1| cystine ABC transporter, permease protein [Synechococcus sp. JA-3-3Ab] gi|86553940|gb|ABC98898.1| cystine ABC transporter, permease protein [Synechococcus sp. JA-3-3Ab] Length = 234 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 83/127 (65%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +S + YV + RGTPL +Q I+ LP +G+VF SF + +++L+LN+ AY+SEI R+ Sbjct: 69 LSSLSALYVSLMRGTPLFLQFLFIYQALPQLGLVFGSFTSAVLALSLNYGAYMSEIFRAG 128 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I +IP GQ +A+YA+GL QT+ IILPQ + ++FI++ K T++AS I + E Sbjct: 129 IQAIPIGQREAAYALGLKPWQTLWCIILPQAFRIVLPDIGNQFIAMQKDTALASAIALQE 188 Query: 174 IFQTAQR 180 + A++ Sbjct: 189 LMGRARQ 195 >gi|323698008|ref|ZP_08109920.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323457940|gb|EGB13805.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 237 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 13/207 (6%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+L+ LL+ A + TL + + + L +G RI I +I Y+ + Sbjct: 3 FSLLFKHQDMLLHGAWI-TLQVTFGALALGLFLGILAGTGRIS-RRVQIRVIADVYIQVI 60 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RGTP+L+Q+F + G P + G D + I++L +N AY +EIIR+ I SI Sbjct: 61 RGTPMLLQIFFFYLGFPQLYMLATGDGFTPDPLITGIVALGINSGAYNAEIIRAGIQSIN 120 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A+ + GL+ Q + H+ILPQ + PL +E I +LK +S+ STI + E+ TA Sbjct: 121 KGQMEAARSTGLSHTQAMFHVILPQALKRMIPPLGNELIVLLKDSSLISTIGVAELMFTA 180 Query: 179 QRIVST--TYQPLIIYCELAFVYLILT 203 + + + TY P ++ + +YL+LT Sbjct: 181 KVLGARYYTYVPFLV--GVGCIYLVLT 205 >gi|225388954|ref|ZP_03758678.1| hypothetical protein CLOSTASPAR_02696 [Clostridium asparagiforme DSM 15981] gi|225044984|gb|EEG55230.1| hypothetical protein CLOSTASPAR_02696 [Clostridium asparagiforme DSM 15981] Length = 226 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 123/221 (55%), Gaps = 15/221 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+++ +P L + A+ VTL + +S + + ++G + ++ I+ +I Y+ I R Sbjct: 5 NVLVQYYP-LFFQALGVTLKMTVVSLIAATVLGTIFGLFKVS-GMGILKVIADIYIDIIR 62 Query: 67 GTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 GTPL+VQ+F+I+YGL + + + A +++L+LN AY++EIIR I ++ Sbjct: 63 GTPLMVQVFIIYYGLGSVLKPYGFSWNAIGGASTAGMVALSLNAGAYMAEIIRGGIEAVD 122 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A+ ++GL + +R IILPQ T + ++FI LK TS+ S I E+ Q Sbjct: 123 KGQMEAARSLGLPYGKAMRKIILPQAFRTMMPSIINQFIITLKDTSLVSVIGPRELTQNG 182 Query: 179 QRIVSTTYQPLI-IYCELAFVYL----ILTSFCYIIQIKIE 214 + I + + ++ I+ +A YL IL+ I++ K+ Sbjct: 183 KIIAANSASLVMPIWLSVALFYLVVCTILSRVAKIVERKVS 223 >gi|197295419|ref|YP_002153960.1| putative binding-protein-dependent transport system protein [Burkholderia cenocepacia J2315] gi|195944898|emb|CAR57507.1| putative binding-protein-dependent transport system component [Burkholderia cenocepacia J2315] Length = 228 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 98/172 (56%), Gaps = 2/172 (1%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVIFYG 80 +TL + ++ V+ + +G A + + L ++ YV R TP +VQLF IF+G Sbjct: 23 ITLALTAVATVLGVAVGVLGAAAYSADARAAVRLRPLIGAYVEAIRNTPFVVQLFFIFFG 82 Query: 81 LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 LP +G+ D + A I+++TLN AY EI+R+ + ++PKG +A+ A+ ++R Q +RH++ Sbjct: 83 LPALGVHIDEYTAAILAMTLNLGAYSVEIVRAGVAAVPKGHLEAASALAMSRAQMLRHVV 142 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 LPQ + LSS+ + + ++V S I++ ++ A I S ++ Y Sbjct: 143 LPQALAKVFPALSSQIVITMLGSAVVSQISVADLTYAASYIQSRNFRAFETY 194 >gi|107023049|ref|YP_621376.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116686710|ref|YP_839957.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|170735479|ref|YP_001774593.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|105893238|gb|ABF76403.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia cenocepacia AU 1054] gi|116652425|gb|ABK13064.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia cenocepacia HI2424] gi|169821517|gb|ACA96098.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 228 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 98/172 (56%), Gaps = 2/172 (1%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVIFYG 80 +TL + ++ V+ + +G A + + L ++ YV R TP +VQLF IF+G Sbjct: 23 ITLALTAVATVLGVAVGVLGAAAYSADARAAVRLRPLIGAYVEAIRNTPFVVQLFFIFFG 82 Query: 81 LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 LP +G+ D + A I+++TLN AY EI+R+ + ++PKG +A+ A+ ++R Q +RH++ Sbjct: 83 LPALGVHIDEYTAAILAMTLNLGAYSVEIVRAGVAAVPKGHLEAASALAMSRAQMLRHVV 142 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 LPQ + LSS+ + + ++V S I++ ++ A I S ++ Y Sbjct: 143 LPQALAKVFPALSSQIVITMLGSAVVSQISVADLTYAASYIQSRNFRAFETY 194 >gi|253689073|ref|YP_003018263.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755651|gb|ACT13727.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 221 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 118/204 (57%), Gaps = 4/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y+W F+L+ D+ P LL + VTL + ++ V+ ++G + R+F +SL Sbjct: 1 MHYQWDFSLVWDNLPVLL-KGLGVTLELWLLAGVLGTVLGLVFGLFRVF-GKRWLSLPAR 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 +V IFR TP+L+QL +Y P +GI F +F A ++LTL +AY +EI R+ + SI Sbjct: 59 VFVEIFRNTPVLIQLIWFYYAFPVLVGIQFSTFAAAALALTLYSAAYCTEIFRAGLQSID 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQW+ + A+G+ + +R ++LPQ + L++ I + K TS+AS + + E+ Sbjct: 119 HGQWEGAKALGMRQAVILRRVVLPQVLRNMLPALTNRMIELAKVTSLASILAVNELMYQG 178 Query: 179 QRIVSTTYQPLIIYCELAFVYLIL 202 + + ST Y+PL I +A +Y IL Sbjct: 179 RLLSSTYYRPLEILTVVALLYFIL 202 >gi|321312471|ref|YP_004204758.1| sulfur-containing amino acid ABC transporter permease [Bacillus subtilis BSn5] gi|320018745|gb|ADV93731.1| sulfur-containing amino acid ABC transporter (permease) [Bacillus subtilis BSn5] Length = 235 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 112/200 (56%), Gaps = 18/200 (9%) Query: 21 IVVTLPIACISFVISLIIGFFIA----VIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +V T+P+ + V+ ++ GF +A ++RIF +++ FYV FR TP ++ + + Sbjct: 15 MVKTIPLTLMMAVLPIVFGFLVALGNIIVRIFRIKGLVAC-SRFYVSFFRSTPAILHIML 73 Query: 77 IFYGLPHIGIVFDSF-------------VAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I+ G+P + SF + +I++L+L AY++EIIRS I+++ GQ + Sbjct: 74 IYLGIPPVADQVSSFFHLGWSANEIPVSMFVIMALSLTAGAYLTEIIRSGILAMDTGQVE 133 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IGLT QT R +ILPQ + S ++ I L +TS+A+ + +PEI TA + S Sbjct: 134 AAYSIGLTHSQTFRRVILPQALMVSIPNFTNLGIGFLHTTSIAAIVAVPEITGTATIVAS 193 Query: 184 TTYQPLIIYCELAFVYLILT 203 Y L + A +Y +LT Sbjct: 194 DNYAFLEAFIGAAIIYWVLT 213 >gi|317053655|ref|YP_004118789.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316952760|gb|ADU72233.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 218 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 114/185 (61%), Gaps = 2/185 (1%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 +A+ TL +A +F +IG +AV R + + + FYV + +G PLL LF++F Sbjct: 14 SALRWTLLLALCTFACGAVIGLLVAVARTSHQRGLQA-VAWFYVELVQGIPLLGMLFLLF 72 Query: 79 YGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 +G+P +GI SF A +++ +L+ A++ EI R SI+++PKGQW+AS ++G++R Q +R Sbjct: 73 FGMPVFLGIDVSSFTAALVAFSLSAGAFLGEIWRGSIMAVPKGQWEASLSLGISRLQMLR 132 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 +ILPQ + S P + ++K+TS+A+ + E+ ++ Q + +T QPL+IY +A Sbjct: 133 TVILPQALRLSLPPTVGFSVQLIKNTSLAALVGFVELTRSGQIVSGSTLQPLLIYLLVAL 192 Query: 198 VYLIL 202 Y L Sbjct: 193 CYFAL 197 >gi|322376869|ref|ZP_08051362.1| amino acid ABC transporter, permease protein [Streptococcus sp. M334] gi|321282676|gb|EFX59683.1| amino acid ABC transporter, permease protein [Streptococcus sp. M334] Length = 213 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 5/205 (2%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRGTPLL 71 P LL A +TL + + + S+ +G IA +++ + + +++ Y+WI RGTPLL Sbjct: 8 LPSLLSGA-SMTLQVFALVLIFSIPLGVLIAFALQVHWKP--LHYLINIYIWIMRGTPLL 64 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +QL I+Y LP IGI D A II+ LN++AY +EI R I +IPKGQ++A+ + + Sbjct: 65 LQLIFIYYVLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKGQYEAAKVLKFS 124 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 T+R+IILPQ + +E +S++K TS+ + I ++ A R + L+ Sbjct: 125 PFATVRYIILPQVTKVVLPSVFNEVMSLVKDTSLVYALGISDLI-LASRTAANRDASLVP 183 Query: 192 YCELAFVYLILTSFCYIIQIKIESS 216 +YLIL I+ K+E Sbjct: 184 MFLAGAIYLILIGIVTILAKKVEKK 208 >gi|187921592|ref|YP_001890624.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187720030|gb|ACD21253.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 245 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 118/199 (59%), Gaps = 13/199 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ ++ T+ + ++ ++L++G ++R S S++ YV +FRG PL+VQ F+ Sbjct: 26 LFSGLLNTVLLTVSAYALALVVGTGFGILRTLPSRPA-SMLGTAYVSVFRGVPLIVQFFI 84 Query: 77 IFYGLPHI-----GIVFDS------FVAI-IISLTLNFSAYISEIIRSSIISIPKGQWDA 124 F+ +P + G F + F+++ I SL + + I E +R+ I ++P+GQ+DA Sbjct: 85 WFFVVPELVPTELGDWFKNLPPYTQFLSVSIFSLGIYTGSRICEQVRAGIQALPRGQFDA 144 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +A+GLTR QT R+++LP T T PL+SEF+ I K+++VASTI + E+ A+++V Sbjct: 145 GFALGLTRAQTYRYVLLPVTFRTILGPLTSEFLIISKNSAVASTIGLLELSGQARQLVDY 204 Query: 185 TYQPLIIYCELAFVYLILT 203 T QP + + Y+ L Sbjct: 205 TAQPYESFICVTLAYMALN 223 >gi|313894065|ref|ZP_07827631.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158 str. F0412] gi|313441629|gb|EFR60055.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158 str. F0412] Length = 218 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 57/171 (33%), Positives = 100/171 (58%), Gaps = 4/171 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ + CI +++S+ G +A++R+ + L+ F V++ RGTPL++Q+ ++Y Sbjct: 15 GLKVTVSLFCIVWILSIPGGILMAMLRLSKLPLVDKLVDAF-VYLMRGTPLMLQILFVYY 73 Query: 80 GLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 LP I I D A +++ LN++AY+ EI R I SI +GQ++ + +G T QT+ Sbjct: 74 ALPIITDGAIQMDDATAAVLTFVLNYAAYLCEIFRGGIQSISRGQYEGAKVLGFTYSQTM 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 R IILPQ PL++E I++LK TS+ + + +I + + IV + Sbjct: 134 RKIILPQMFKRVLPPLANETINLLKDTSLVYVLAMNDILRITKSIVQRDFD 184 >gi|73662246|ref|YP_301027.1| amino acid ABC transporter periplasmic protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494761|dbj|BAE18082.1| truncated ABC-type amino acid transport system periplasmic component [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 398 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 90/144 (62%), Gaps = 1/144 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ RGTPLLVQ+F++++G + G+ + + +I+L +N SAYI+EIIR+ I ++ Sbjct: 237 YIEFLRGTPLLVQVFLVYFGTTAVLGLNISALICGMIALVINCSAYIAEIIRAGINAVDS 296 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ ++GLT QT++ +ILPQ I L +EF++++K +S+ S I + EI AQ Sbjct: 297 GQTEAARSLGLTYGQTMKSVILPQAIKNILPALGNEFVTVIKESSIVSVIGVSEIMFNAQ 356 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 + ++ P A +Y ILT Sbjct: 357 VVQGASFDPFTPLIVAAILYFILT 380 >gi|332715837|ref|YP_004443303.1| ABC transporter membrane spanning protein [Agrobacterium sp. H13-3] gi|325062522|gb|ADY66212.1| ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 219 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 108/184 (58%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ +SF+ ++G + +RI ++ Y+ +F+GTPLL+QLF+ F+GL Sbjct: 20 TLLLSLVSFIGGGMVGIVLLWLRIS-PRRAVNRAARIYIEVFQGTPLLMQLFIAFFGLGL 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ +++A ++L L +A+++EI R + +I KGQW+AS ++ + R Q +R++ILPQ Sbjct: 79 LGVDVPAWLAAGVALILWTAAFLAEIWRGCVEAIAKGQWEASASLAMGRLQQMRYVILPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T++ S I E+ + + + T+QP +Y +A +Y L Sbjct: 139 ALKIAIPPTVGFSVQVVKGTALTSIIGFVELSKAGTIVTNATFQPFTVYGLVALIYFAL- 197 Query: 204 SFCY 207 C+ Sbjct: 198 --CW 199 >gi|297243838|ref|ZP_06927768.1| ABC-type amino acid transporter, permease component [Gardnerella vaginalis AMD] gi|296888259|gb|EFH27001.1| ABC-type amino acid transporter, permease component [Gardnerella vaginalis AMD] Length = 337 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 129/248 (52%), Gaps = 29/248 (11%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++EW + I + + I TL + I+ VIS++ +A++R + ++ + F+ Sbjct: 56 RFEWQVVGIYLISDNVLSGIGWTLLLTLIAMVISIVFAVGLAMMRKSV-NPVLRGVSWFF 114 Query: 62 VWIFRGTPLLVQLFVIFYGL-----PHIGI----------------VFDSFVAIIISLTL 100 +W FRGTP+ QL +F+G+ P IGI + S A ++ L+L Sbjct: 115 IWFFRGTPVYTQL--VFWGMFAVLVPRIGIGIPFTSVEFWSIDSNVIMTSLTAAVVGLSL 172 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N SAY+SEI+R+ + ++ GQ +A+ A+G+ R T+R IILPQ + PL +E I +L Sbjct: 173 NESAYLSEIVRAGLEAVDSGQVEAAKALGMGRALTMRRIILPQAMRIIVPPLGNETIGML 232 Query: 161 KSTSVASTITIP---EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 K+TS+ + +P E+ I + Y+P+ + + YLI+TS ++Q +E Sbjct: 233 KTTSL--VLAVPFTLELQFATNAIANRIYKPIPLLLVASIWYLIITSILMVLQYMLEKHF 290 Query: 218 TQHTYSVD 225 + + D Sbjct: 291 AKGFEARD 298 >gi|282890142|ref|ZP_06298673.1| hypothetical protein pah_c013o049 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499993|gb|EFB42281.1| hypothetical protein pah_c013o049 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 250 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 76/219 (34%), Positives = 120/219 (54%), Gaps = 3/219 (1%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y+W + + + +L + T+ ++ I ++SLIIG IA + + Y+ Sbjct: 35 YDWSS--VWEYRELFLKGWLNTVYLSGICLILSLIIGC-IAAFSKLSAIPFFRYLATGYI 91 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPLLVQ+ V +Y + H + + + ++SL+L AYI+E+IR+ I SI Q Sbjct: 92 EFIRGTPLLVQILVFYYVVAHAVGLENRLIVGVLSLSLFSGAYIAEMIRAGIESISSTQL 151 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +++ AI LT QT R II PQ ++ + PL+ +F SI+K +S+ S I I E+ TAQ+I Sbjct: 152 ESARAICLTPFQTYRFIIFPQAVSQTLPPLAGQFASIIKDSSLLSIIGINELTNTAQQIN 211 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 S TY L + LA YL+LT ++ K+E T Sbjct: 212 SATYSTLESFFPLALGYLVLTLPISLLSKKLEERFRYET 250 >gi|187919666|ref|YP_001888697.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187718104|gb|ACD19327.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 248 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 105/191 (54%), Gaps = 1/191 (0%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 + +L + VTL + +S V+ I+G A + + ++ YV + R TP +V Sbjct: 13 YGGMLARGVAVTLGLTAVSTVLGGIVGIAGASVAVA-GPKWARWVVASYVELIRNTPFIV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF +F+GLP +GI D A I+++T+N AY EI+R+ I SI +GQ A+ A+GL Sbjct: 72 QLFFVFFGLPSLGIHIDEVQAAILAMTVNLGAYAIEIVRAGIDSISRGQIQAAQALGLHG 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +Q R I+LPQ I L S+ + ++ ++V S I++P++ A I S ++ Y Sbjct: 132 RQVFRFIVLPQAIANVFPALLSQVLIVMLGSAVVSQISVPDLTYAANFIQSRNFRSFESY 191 Query: 193 CELAFVYLILT 203 + YL+L+ Sbjct: 192 LIITATYLVLS 202 >gi|282857095|ref|ZP_06266341.1| L-cystine transport system permease protein TcyB [Pyramidobacter piscolens W5455] gi|282585030|gb|EFB90352.1| L-cystine transport system permease protein TcyB [Pyramidobacter piscolens W5455] Length = 254 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 118/207 (57%), Gaps = 4/207 (1%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 ++++ T+ +A +S + ++++GF +A R +++ ++ + FR TP + QLF Sbjct: 42 IIFSGFKNTVSMAFVSLIFAVLLGFVLAASR-YYNIPVLKQFSVVFTSFFRSTPFIAQLF 100 Query: 76 VIFYGLPHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 V +YG I SF A++I L+L+F+AY+ E IR +I S+ KGQ++A +IG+T Sbjct: 101 VFYYGFAQISAAVRGLSSFWAVVIVLSLSFAAYMGENIRGAISSVDKGQFEAGISIGMTP 160 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QTIR I++PQ + + + F ++ KSTS+A T+ + ++ A+ V+ TY+ L + Sbjct: 161 WQTIRRIVIPQAARVAVPGMVNSFANLFKSTSLAFTVGVMDMTSCAKNEVNLTYRYLEGF 220 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQ 219 L +Y ++ + Q +E + + Sbjct: 221 IALLIIYWVILALVSYAQSLLERYMNR 247 >gi|237669674|ref|ZP_04529651.1| glutamine ABC transporter, permease/substrate-binding protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|237654748|gb|EEP52311.1| glutamine ABC transporter, permease/substrate-binding protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 221 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 74/215 (34%), Positives = 126/215 (58%), Gaps = 3/215 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 ++ L+ DS P L + ++VT+ I+ IS +I++I+G + I + I+ + Y++ Sbjct: 2 QFLELLKDSLPSLT-SGLLVTIKISIISIIIAVILGIVFGIFSIS-KNKILKTLYIIYLY 59 Query: 64 IFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I RGTPL+VQ +I++G+ P I + II+L LN AY+SEI R+ I ++ GQ Sbjct: 60 IIRGTPLMVQALIIYFGIAPLIVERSNPMYCAIIALALNAGAYMSEIFRAGIQAVDVGQM 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++GL +T++ +ILPQ I + ++FI +K TS+ + ITI E+ + Q IV Sbjct: 120 EASRSLGLGYLKTMQKVILPQAIKVMIPSIINQFIVTIKDTSILTVITIRELTSSGQIIV 179 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + ++PL Y + +Y IL + I+ IE S+ Sbjct: 180 ARNFKPLETYAIVGIMYFILITTLSILSKYIERSL 214 >gi|253576767|ref|ZP_04854093.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251843798|gb|EES71820.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 219 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 49/131 (37%), Positives = 85/131 (64%), Gaps = 5/131 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGI-----VFDSFVAIIISLTLNFSAYISEIIRSSII 115 Y+++ RGTPLL+Q+ + +GLP I + V D FVA ++ TLN++AY +EI R ++ Sbjct: 56 YIYVMRGTPLLLQMLFVCFGLPVIPVIGEYLVMDRFVAACVAFTLNYAAYFAEIFRGGLL 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +I KGQ++A+ +GL+R QT I+LPQ + + +S+E I+++K T++ + +PE+ Sbjct: 116 AIDKGQYEAAKVLGLSRWQTTTRIVLPQMLRIALPAVSNESITLVKDTALLYAVAVPELL 175 Query: 176 QTAQRIVSTTY 186 AQ V+ + Sbjct: 176 HFAQTAVNRDF 186 >gi|291530248|emb|CBK95833.1| amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-) [Eubacterium siraeum 70/3] Length = 219 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 117/218 (53%), Gaps = 2/218 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 N I + P L A ++T+ + + + S+IIG AV++ ++ +I I+ Y+ I Sbjct: 3 LNAIAEYLP-LFGEAALLTVKLGVLGIIFSIIIGLVCAVVQ-YYKVPVIRRIVSVYIEIS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLLVQLF I+YGLP +GI D+ I L +Y++E RS + S+ K Q +++ Sbjct: 61 RNTPLLVQLFFIYYGLPKVGIPTDAETCGIAGLAFLGGSYMAEAFRSGLESVDKIQTESA 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y++G+ + Q +R++ILPQ ++ S + I ++K TSV S I++ ++ A+ ++ Sbjct: 121 YSLGMNKMQAMRYVILPQAMSVSIPAFVANVIFLMKETSVFSAISLLDLMFMAKDLMGMY 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 C L YLI+ I+ +E V + + Sbjct: 181 NDTTEALCLLVGFYLIILLPISIVGTIVERRVRRAGFG 218 >gi|307706790|ref|ZP_07643595.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK321] gi|307617875|gb|EFN97037.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK321] Length = 213 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 5/205 (2%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRGTPLL 71 P LL A +TL + + + S+ +G IA +++ + ++ +++ Y+WI RGTPLL Sbjct: 8 LPSLLSGA-SMTLQVFALVLIFSIPLGVLIAFALQVHWK--LLHHLINIYIWIMRGTPLL 64 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +QL I+Y LP IGI D A II+ LN++AY +EI R I +IPKGQ++A+ + Sbjct: 65 LQLIFIYYVLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKGQYEAAKVLKFN 124 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 T+R+IILPQ + +E +S++K TS+ + I ++ A R + L+ Sbjct: 125 PFATVRYIILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLI-LASRTAANRDASLVP 183 Query: 192 YCELAFVYLILTSFCYIIQIKIESS 216 +YLIL I+ K+E Sbjct: 184 MFLAGAIYLILIGIVTILAKKVEKK 208 >gi|254455291|ref|ZP_05068720.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Candidatus Pelagibacter sp. HTCC7211] gi|207082293|gb|EDZ59719.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Candidatus Pelagibacter sp. HTCC7211] Length = 228 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 9/230 (3%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M EW ++ I+ PQ+L+A + L A + + I+ I+G + T I ++ Sbjct: 1 MNAEWRWDFAIEILPQMLWATLNTILA-AGVGYAIAAIVGLLF----LLGQRTPIKIVNM 55 Query: 60 FY---VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 F V R TPLL+QLF +++ LP GI ++V +I++ L+F Y+SE+ R ++ Sbjct: 56 FNREIVEFIRSTPLLIQLFFVYFVLPQFGITLSAWVCGMITIGLHFGTYLSEVYRGALEG 115 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +PK QW+A A+ + T R I+LPQ + + + + I K T + STI + E+F Sbjct: 116 VPKTQWEACRALNFSTFYTYRKIVLPQAFPIAIPGMGNYLVGIFKDTPLLSTIGVAELFH 175 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 A + Y+ L Y + ++L L+ + K+E +V + K Sbjct: 176 AATAVGGYNYRYLEPYTIVGIIFLTLSIPAAMWIRKLEKNVNLAQGKIKK 225 >gi|91786312|ref|YP_547264.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91695537|gb|ABE42366.1| amino acid ABC transporter membrane protein, PAAT family [Polaromonas sp. JS666] Length = 273 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 111/205 (54%), Gaps = 8/205 (3%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ + I+ ++ ++IG A+ +I + I Y+W+ RGTPLLVQ+ +F LP Sbjct: 71 VTVQLTVIAGLVGIVIGVLAALGKISRLPPL-RWIASLYIWVVRGTPLLVQVLFVFLALP 129 Query: 83 HI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 + + F + ++L N AY +E IRS ++++PKGQ +A+ ++GL+ T + Sbjct: 130 TLVPALQLSDFSSACVALAFNAGAYNAEAIRSGLLAVPKGQIEAARSLGLSSFFTFIDVT 189 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 PQ S PL + +++LK +S+A I + E+ RI + T+QPL A +YL Sbjct: 190 FPQAFKISLPPLVNNTVALLKDSSLAYAIGVVELTNVGNRIQAATFQPLPTLVTTAVIYL 249 Query: 201 ILTSFCYIIQIKIESSVTQHTYSVD 225 +LT+ + QI S + Y V+ Sbjct: 250 VLTTV--LTQI---SGAVERRYDVE 269 >gi|227822266|ref|YP_002826237.1| amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] gi|227341266|gb|ACP25484.1| amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 276 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 119/212 (56%), Gaps = 12/212 (5%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S + ++ F +A+ R+ + S I + YV+ FRGTPL+ QLF+++ Sbjct: 64 SGLGVTLLLVISSIPMGAVLSFPVALGRMS-KNRFWSWIAYIYVYFFRGTPLIAQLFLVY 122 Query: 79 YGL-------PHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 YGL IG+ + D++ + + TLN +AY +EI+R +I S+P+GQ + + A+ Sbjct: 123 YGLGSFRPQLESIGLWWFFRDAWNCALFTFTLNTAAYQAEILRGAIESVPRGQHEGAAAL 182 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL + +ILPQ + + P +E I ++K +++ + +T+ ++ +R S T+ Sbjct: 183 GLPERIAFFKVILPQAMIVALRPYGNEIILMIKGSAIVAIVTVFDLMGETRRAFSRTFD- 241 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +Y A +YL++ F I IE+ +T+H Sbjct: 242 FQMYVWAAVLYLLIVEFLRNIWAWIEARLTRH 273 >gi|332974712|gb|EGK11628.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Desmospora sp. 8437] Length = 244 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 54/151 (35%), Positives = 90/151 (59%), Gaps = 1/151 (0%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ I + Y+ + RGTPL+VQ+ ++GL +G + F A I++L ++ +AYI+EI R Sbjct: 71 VLQWIANLYIALIRGTPLIVQIMFFYFGLAQGLGWNINEFPAGILALGIHAAAYIAEIFR 130 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 +I SI +GQ +A+ ++G++ Q +R I++PQ S PL ++FI LK +S+ + I + Sbjct: 131 GAIQSIDRGQMEAARSLGMSYPQAMRRIVMPQAFRRSLPPLGNQFIIGLKDSSLVAYIGV 190 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 E+F A S YQP + Y YL L Sbjct: 191 NELFGMALSEASANYQPFLTYAVNGLYYLAL 221 >gi|258647026|ref|ZP_05734495.1| glutamine ABC transporter, permease protein [Dialister invisus DSM 15470] gi|260404467|gb|EEW98014.1| glutamine ABC transporter, permease protein [Dialister invisus DSM 15470] Length = 215 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 59/178 (33%), Positives = 103/178 (57%), Gaps = 14/178 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQ 73 +++ + V+ I + V+SL +G +A++RI + + L Y+++ RGTPL++Q Sbjct: 11 MFSGLGVSAQIFIFTIVLSLPLGMLLAMVRI----SKVGLFRQAAGAYIYLMRGTPLMLQ 66 Query: 74 LFVIFYGLPHIGIVFD----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 + I+YGLP ++FD F A I++ N++AY +EI R I SI KGQ++ + +G Sbjct: 67 IMFIYYGLP---LIFDLQISDFPAAILAFVANYAAYFAEIFRGGIQSISKGQYEGAKVLG 123 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 T KQT+ HIILPQ + PL +E I++LK TS+ + + ++ + + V + Sbjct: 124 FTYKQTMWHIILPQVVKRVIPPLGNETITLLKDTSLVYILAMNDLMRVTRAFVQRDFD 181 >gi|317403050|gb|EFV83587.1| glutamine transport system permease [Achromobacter xylosoxidans C54] Length = 218 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 120/218 (55%), Gaps = 4/218 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++W N+++++ P L + +T+ I ++G V R + I+S I Sbjct: 1 MDFDW-NVVMEALPNL-WVGTQMTIKITFWGLFGGFLLGALSGVTRAY-GHPILSGIAQV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + RGTP++VQ+ I++ LP + I D+ A I++L +N AYISEI+R S++S+ K Sbjct: 58 YVAVIRGTPIVVQVMFIYFALPLLANIRVDAEWAAIVTLIINSGAYISEIVRGSLLSVHK 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G +A A+GL + + HII P PL ++ I LK +S+ I + E+ + Q Sbjct: 118 GLKEAGQAMGLPFHKILFHIIGPVAFRRMIPPLGNQCIISLKDSSLFIVIGVAELTRQGQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 I+++ ++ + I+ +A VYLILT +I +E + Sbjct: 178 EIMASNFRAVEIWSAIAIVYLILTGTMALILHLVEKRM 215 >gi|300783425|ref|YP_003763716.1| amino acid ABC transporter permease [Amycolatopsis mediterranei U32] gi|299792939|gb|ADJ43314.1| permease component of ABC-type amino acid transport system [Amycolatopsis mediterranei U32] Length = 292 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 120/221 (54%), Gaps = 16/221 (7%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F +++ ++ T+ +A +S +++++G IA++R ++ + Y+WIFRG P+L+ Sbjct: 50 FYKVMATGLLNTVVLAVLSQAVAIVLGIVIALLR-RSANPVARWFAAGYIWIFRGLPVLL 108 Query: 73 QLFVIFYGL----PHIGIVF----------DSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Q+ ++Y L P I I F +F A + L LN SAY++EI+R+ + S+ Sbjct: 109 QIL-LWYNLALVFPVIDIPFLVHEQTNVLISAFTAAFLGLALNESAYMAEIVRAGLNSVD 167 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +A+ +IG+T T+R ++LPQ + P ++FI++LK TS+AS I + E+ A Sbjct: 168 SGQTEAAKSIGMTPAATLRRVVLPQAMRVIIPPTGNDFINMLKGTSMASVIGVTELIHAA 227 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 I S + A Y+++ + + Q +E + Q Sbjct: 228 NNISSNNLLVMETLLAAAVWYMVVVTVAGVGQHYLERAFGQ 268 >gi|293605651|ref|ZP_06688030.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292815935|gb|EFF75037.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 218 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 115/206 (55%), Gaps = 4/206 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W +I D+ P LL ++ T+ I ++G V R + I+S I Sbjct: 1 MEFDW-TVIKDALPNLLEGTLM-TIKITFWGLFGGFLLGALSGVTRAY-GHPILSAIAQV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + RGTP++VQ+ I++ LP + I D+ A I++L +N AYISEI+R +++S+ K Sbjct: 58 YVAVIRGTPIVVQVMFIYFALPLLADIRVDAEWAAIVTLIINSGAYISEIVRGALLSVHK 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G +A A+GL + + HII P PL ++ I LK +S+ I + E+ + Q Sbjct: 118 GLKEAGQAMGLPFHKILFHIIGPVAFRRMIPPLGNQCIISLKDSSLFIVIGVAELTRQGQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSF 205 I+++ ++ + I+ +A VYLILT Sbjct: 178 EIMASNFRAVEIWSAVAIVYLILTGL 203 >gi|237736050|ref|ZP_04566531.1| polar amino acid ABC transporter, inner membrane subunit [Fusobacterium mortiferum ATCC 9817] gi|229421864|gb|EEO36911.1| polar amino acid ABC transporter, inner membrane subunit [Fusobacterium mortiferum ATCC 9817] Length = 255 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 70/230 (30%), Positives = 121/230 (52%), Gaps = 16/230 (6%) Query: 1 MKYEWF-NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT------- 52 M EW ++ +++P L A VTL I+ + ++ IIG + VIR Sbjct: 1 MSLEWIIRILENNWPMFLRGA-GVTLWISVVGTILGTIIGLIVGVIRTIPVPEKGAKKGV 59 Query: 53 --IISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEI 109 +++ ++ Y+ FRGTP++VQ VI+YG I D A + +++N AY+SEI Sbjct: 60 LRVVNWLLSAYIEFFRGTPMIVQAMVIYYGSALAFEIDIDRIAAALFIVSINTGAYMSEI 119 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 +R IIS+ KGQ++A+ AIG+ QT+ +++LPQ + +EF+ +K TSV + I Sbjct: 120 VRGGIISVDKGQFEAAQAIGMNHFQTMTNVVLPQVVRNILPATGNEFVINIKDTSVLNVI 179 Query: 170 TIPEIFQTAQRIVSTT---YQPLIIYCELAFVY-LILTSFCYIIQIKIES 215 ++ E+F + + ++ I C L FV +T I++K++ Sbjct: 180 SVSELFFQTKTVAGNNFRYFETFFITCILYFVMTFTITRILRYIEVKLDG 229 >gi|89898271|ref|YP_515381.1| ABC transporter of amino acids [Chlamydophila felis Fe/C-56] gi|89331643|dbj|BAE81236.1| ABC transporter of amino acids [Chlamydophila felis Fe/C-56] Length = 217 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 115/200 (57%), Gaps = 3/200 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVI-RIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 ++L TL ++ IS + ++G I + +F I + + YV + RGTPL +Q Sbjct: 9 KVLLRGCGYTLFVSGISILCGSLLGLVIGTMTSRYFPCRITRWMGNLYVTVIRGTPLFIQ 68 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 + + ++GLP I G+ +A +I+L++N SAY++E IR I ++ GQW+++ +G + Sbjct: 69 ILIFYFGLPSIIGVDPTPLMAGLIALSINSSAYLAENIRGGINALSVGQWESAKVLGYKK 128 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 Q +II PQ L++EF++++K +S+ + +PE+ + ++ IVS P+ +Y Sbjct: 129 SQIFFYIIYPQVFKNILPSLTNEFVALIKESSILMVVGVPELTKVSKDIVSRELNPMEMY 188 Query: 193 CELAFVYLILTS-FCYIIQI 211 A +YL +TS F Y+ ++ Sbjct: 189 SICAGLYLFMTSLFSYVSRL 208 >gi|149191817|ref|ZP_01870054.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1] gi|148834335|gb|EDL51335.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1] Length = 227 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 114/203 (56%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LI++SFP L + T + ++ VI L + +AV R ++ + SL +++ F Sbjct: 3 FSLIVESFPVYL-DGLWTTAWLVSLALVIGLCVAIPLAVARNS-TNYLFSLPSWGFIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G++ +T R IILP + + S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMSPWKTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFESFLTAGLFYMGLT 203 >gi|71910889|ref|YP_282439.1| transporter [Streptococcus pyogenes MGAS5005] gi|71853671|gb|AAZ51694.1| transporter [Streptococcus pyogenes MGAS5005] Length = 724 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 57/168 (33%), Positives = 98/168 (58%), Gaps = 7/168 (4%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYI 106 + LI +V + RG PL++ IF+G+P++ + F+A I+L+LN AYI Sbjct: 553 LRLISTVFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGGAYI 612 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EI+R I ++P GQ +AS ++GL+ T+R +ILPQ + ++F+ LK T++ Sbjct: 613 AEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLKDTTIV 672 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S I + E+FQT + I++ YQ +Y LA +YLI+ + + ++E Sbjct: 673 SAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLE 720 >gi|70729651|ref|YP_259390.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68343950|gb|AAY91556.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 218 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 63/184 (34%), Positives = 108/184 (58%), Gaps = 2/184 (1%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 +D P LL A VVTL + SFV+S +IG A++ + ++ +L V + RG P Sbjct: 7 LDFLPILLKGA-VVTLQVTVGSFVLSSLIGLVFALMMVSKVRSV-ALFAIGVVNVIRGLP 64 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 ++VQLF I++ LP GI + A +I L + +SAY +E R+ I +I +GQ +A+ +IG Sbjct: 65 IIVQLFYIYFVLPDFGIQLTAMQAGVIGLGIAYSAYQAENFRAGIQAIHQGQIEAAESIG 124 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 + +R ++LPQ + + P + + +LK +S+ STIT+ E+ + Q I S+T++ + Sbjct: 125 MRGPMIMRRVVLPQALRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAGQLIASSTFENM 184 Query: 190 IIYC 193 +Y Sbjct: 185 TVYT 188 >gi|154246380|ref|YP_001417338.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] gi|154160465|gb|ABS67681.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] Length = 234 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 110/203 (54%), Gaps = 1/203 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M YE ++ + + L+ +++T+ ++ S G +A +R + ++ Sbjct: 1 MPYELRLEVLAQYREQLFDGLLMTVWLSVASIAAGTFFGVVLASLRSVRGGPV-RFLVDA 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TP LVQLF+I++GLP +G + A +I +T+N +AY +EIIR+ I SI K Sbjct: 60 YVEVIRNTPFLVQLFIIYFGLPTLGFRVGAVTAALIGMTINLAAYSTEIIRAGIESIHKS 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A+GLT+ Q R II+ + L S+F+ ++ ++SV S I+ PE+ A Sbjct: 120 QIEAGEALGLTQLQIYRDIIILPAVAKVYPSLCSQFVLMMLASSVCSAISTPELTAAASY 179 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 S +Y+ +Y + +YL L Sbjct: 180 AQSQSYRSFEVYIAVTLIYLALA 202 >gi|294793049|ref|ZP_06758195.1| amino acid ABC transporter, permease protein [Veillonella sp. 6_1_27] gi|294794912|ref|ZP_06760047.1| amino acid ABC transporter, permease protein [Veillonella sp. 3_1_44] gi|294454274|gb|EFG22648.1| amino acid ABC transporter, permease protein [Veillonella sp. 3_1_44] gi|294455994|gb|EFG24358.1| amino acid ABC transporter, permease protein [Veillonella sp. 6_1_27] Length = 238 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 57/171 (33%), Positives = 100/171 (58%), Gaps = 4/171 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ + CI +++S+ G +A++R+ + L+ F V++ RGTPL++Q+ ++Y Sbjct: 35 GLKVTVSLFCIVWILSIPGGILMAMLRLSKLPLVDKLVDAF-VYLMRGTPLMLQILFVYY 93 Query: 80 GLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 LP I I D A +++ LN++AY+ EI R I SI +GQ++ + +G T QT+ Sbjct: 94 ALPIITDGAIQMDDATAAVLTFVLNYAAYLCEIFRGGIQSISRGQYEGAKVLGFTYAQTM 153 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 R IILPQ PL++E I++LK TS+ + + +I + + IV + Sbjct: 154 RKIILPQMFKRVLPPLANETINLLKDTSLVYVLAMNDILRITKSIVQRDFD 204 >gi|86146433|ref|ZP_01064756.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222] gi|218709051|ref|YP_002416672.1| histidine transport system permease HisM [Vibrio splendidus LGP32] gi|85835696|gb|EAQ53831.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222] gi|218322070|emb|CAV18142.1| Histidine transport system permease protein hisM [Vibrio splendidus LGP32] Length = 225 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 113/203 (55%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LII+S P L + T + C++ ++ L + +A+ R + +I+ +++ F Sbjct: 3 FSLIIESLPIYL-GGLWTTAWMVCVALIVGLFVAIPLAIARNS-PNMMINAPAWSFIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQFFPVKDTLWENAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G++ +T R IILP + + S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMSTPKTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFESFLTAGLFYMALT 203 >gi|312139901|ref|YP_004007237.1| ABC transporter transmembrane protein [Rhodococcus equi 103S] gi|325674219|ref|ZP_08153908.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] gi|311889240|emb|CBH48554.1| putative ABC transporter integral membrane subunit [Rhodococcus equi 103S] gi|325554899|gb|EGD24572.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] Length = 314 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 124/223 (55%), Gaps = 24/223 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + AA T+ + ++ VI++++G +AV+R+ + ++ Y+W+FRGTP+ V Sbjct: 64 FDKRITAAAWKTIQLTVLAMVIAIVLGVVLAVMRLS-PNPVLRSAAWVYLWVFRGTPVYV 122 Query: 73 QLFVIFYGL-PHI------GIVFD-------------SFVAIIISLTLNFSAYISEIIRS 112 QL +F+GL P I GI F +F+ +I L LN +AY++EI+R+ Sbjct: 123 QL--VFWGLFPSIYKTIDVGIPFGPQFAHFDIQALEAAFLFAVIGLALNEAAYMAEIVRA 180 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + S+ +GQ +AS A+G++ QT+R +LPQ + P +E IS+LK+TS+ + + Sbjct: 181 GVGSVSEGQTEASTALGMSWAQTMRRTVLPQAMRVIIPPTGNELISMLKTTSLVAAVPYS 240 Query: 173 -EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 E++ A+ I + P+ + + YL +TS + Q IE Sbjct: 241 LELYGRARDISGANFYPVPLLLVASTWYLAITSILMVGQYYIE 283 >gi|317047795|ref|YP_004115443.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316949412|gb|ADU68887.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 291 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 23/203 (11%) Query: 32 FVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY------------ 79 V+++++ +AV+R+ S+ ++ ++W FRGTP+LVQL IF+ Sbjct: 84 MVLAIVLSILLAVMRLA-SNPLLVGFSRGWIWFFRGTPVLVQL--IFWYNLAALYPQVSL 140 Query: 80 GLPHI-----GIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 G+P + G D A I+ L LN SAY++EIIR+ I S+ GQ +A+ A+G+T Sbjct: 141 GIPGLFTLWSGSTNDLITPLAAAILGLGLNESAYMAEIIRAGISSVDDGQQEAARALGMT 200 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 R Q ++ +ILPQ I P ++ I +LK+TS+ S I++ ++ +AQ I S TY+ + + Sbjct: 201 RGQYLKRVILPQAIPFIIPPTGNQVIGMLKTTSLVSVISLSDLLYSAQAIYSRTYENIPL 260 Query: 192 YCELAFVYLILTSFCYIIQIKIE 214 YL T+ ++Q ++E Sbjct: 261 LIVACIWYLAATTVLSLVQARVE 283 >gi|300719077|ref|YP_003743880.1| Polar amino acid ABC transporter inner membrane subunit [Erwinia billingiae Eb661] gi|299064913|emb|CAX62033.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia billingiae Eb661] Length = 507 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 108/189 (57%), Gaps = 1/189 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ V+ L + + +IIGFF+A+ II + Y++I RGTP+L+QL + Sbjct: 13 LWQGAVIALELLVGALAGGVIIGFFLALASTS-RHWIIRFPVQVYIYILRGTPVLLQLIL 71 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP G+ F F++ +++L +N +A+ +EIIR I++ + Q A+ A G +R + + Sbjct: 72 LYNVLPQFGLRFSPFLSALLALMINETAFCAEIIRGGILATDRNQRTAAQAFGYSRTKEM 131 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 H+++PQ + + +E + +LKSTS+AS + + E+ Q IVS + + + Sbjct: 132 IHVVIPQALRAILPTMGNEAVGLLKSTSLASVVGVNELTMRGQTIVSQNFLFIPVLVASG 191 Query: 197 FVYLILTSF 205 +Y+IL+S Sbjct: 192 GIYMILSSL 200 >gi|328473249|gb|EGF44097.1| amino acid ABC transporter permease [Vibrio parahaemolyticus 10329] Length = 225 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 115/203 (56%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LII+SFP L + T+ + IS VI L + +A+ R ++ +SL +++ F Sbjct: 3 FSLIIESFPVYL-QGLWTTVWLVGISLVIGLCVSVPLAIARNS-TNYALSLPSWGFIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQFFPVKDTLWEHAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G+++ T + IILP + + S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMSKFMTYKRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIVDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFESFLTAGLFYMSLT 203 >gi|313890332|ref|ZP_07823964.1| ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] gi|313121318|gb|EFR44425.1| ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] Length = 523 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 101/182 (55%), Gaps = 8/182 (4%) Query: 50 SDTIISLIMHFYVW-------IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLN 101 +T+++L + W IFRGTP++VQ VI+YG GI D +A I +++N Sbjct: 328 KNTVVALFQKLFGWFLNIYIEIFRGTPMIVQSMVIYYGTAQAFGISIDRTLAAIFIVSIN 387 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 AY++EI+R I ++ +GQ++A+ A+G + QT+R I+LPQ I +EF+ +K Sbjct: 388 TGAYMTEIVRGGIFAVDQGQFEAATALGFSHGQTMRKIVLPQVIRNILPATGNEFVINIK 447 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TSV + I++ E++ + + + YQ + +A +Y ILT I +E + T Sbjct: 448 DTSVLNVISVVELYFSGNTVATQNYQYFQTFSVIALIYFILTFTVTRILRYVERRLDDDT 507 Query: 222 YS 223 Y+ Sbjct: 508 YT 509 >gi|111023904|ref|YP_706876.1| glutamate transport system permease protein GluD [Rhodococcus jostii RHA1] gi|110823434|gb|ABG98718.1| probable glutamate transport system permease protein GluD [Rhodococcus jostii RHA1] Length = 275 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 116/202 (57%), Gaps = 5/202 (2%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVW 63 W L+ + + ++ T+ A +S V+S++ G +A +R+ SD+ ++ ++ +V Sbjct: 62 WSVLLDRDLMRSVLKGLLATIQCAIVSIVLSVVFGMILAAMRM--SDSRLLRGVVRVWVE 119 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFRG PLLV +F IF G P GI+ +F A+ + ++L SA +SEI R+ I S+P+GQ + Sbjct: 120 IFRGLPLLVLIFFIFLGAPQFGIIVPTFWALALGISLYNSAVMSEIFRAGIASLPRGQAE 179 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ AIG+ + Q R I+LPQ I L S+ ++I+K TS+ I E+ ++ + V Sbjct: 180 AAAAIGMRKTQIFRIILLPQGIRIMLPALISQVVTIVKETSLGFVIGYTELLRSGRVAVE 239 Query: 184 --TTYQPLIIYCELAFVYLILT 203 + +Y +A +YL++ Sbjct: 240 YLGGQYAIPVYVLIAIIYLLMN 261 >gi|288960750|ref|YP_003451090.1| amino acid ABC transporter permease protein [Azospirillum sp. B510] gi|288913058|dbj|BAI74546.1| amino acid ABC transporter permease protein [Azospirillum sp. B510] Length = 215 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 75/214 (35%), Positives = 118/214 (55%), Gaps = 2/214 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++IID+FP LL AA V T+ ++ + ++ +IG + V R + YV F Sbjct: 3 FSVIIDAFPYLLGAA-VTTIWVSLLGVLLGQVIGVAVCVAR-QSGGRAADIAGGVYVSFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG PLL+QL +I+Y LP IGI VA I +L L AY+SEI R ++ ++P GQ +A+ Sbjct: 61 RGVPLLIQLLLIYYMLPLIGIDVPPLVASIAALGLASGAYVSEIYRGALNAVPHGQSEAA 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G I+LPQ S L +E I +LK++S+ S + + E+ +T+Q I ++ Sbjct: 121 LALGFPGWSIWSRILLPQAFRISVPALVNELILLLKASSLISVVGVAELTRTSQTISASN 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 Y+PL IY +YL + + +E + Q Sbjct: 181 YRPLEIYLAAGLIYLAINGALALFGTLVERRLQQ 214 >gi|329113273|ref|ZP_08242056.1| Inner membrane amino-acid ABC transporter permease protein YecS [Acetobacter pomorum DM001] gi|326697414|gb|EGE49072.1| Inner membrane amino-acid ABC transporter permease protein YecS [Acetobacter pomorum DM001] Length = 519 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 65/190 (34%), Positives = 115/190 (60%), Gaps = 2/190 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 PQL AA + TL ++ + V+++ G +A++R++ T + + YV + RGTPLL+ Sbjct: 309 LPQLAKAAWL-TLLVSLCAMVLAVGAGLALALLRLY-GPTPLRWLATTYVEVVRGTPLLI 366 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 Q+ IFYGLP GI F+A ++SL +N++AY +E R+ + S+ GQ +A+ A+ +T Sbjct: 367 QVLFIFYGLPEFGISLTPFLAGVVSLGMNYAAYEAENYRAGLQSVAHGQMEAALALNMTH 426 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 Q +R++++PQ ++++FIS+LK +S+ S IT+ E+ QT R+ S+ + Sbjct: 427 AQALRYVVVPQAFRLVMPVMTNDFISLLKDSSLVSVITLTELTQTYIRLSSSYFDYFGTG 486 Query: 193 CELAFVYLIL 202 + YL+L Sbjct: 487 LMVGAAYLLL 496 >gi|139473633|ref|YP_001128349.1| glutamine ABC transporter,glutamine-binding protein/permease protein [Streptococcus pyogenes str. Manfredo] gi|134271880|emb|CAM30117.1| putative glutamine ABC transporter,glutamine-binding protein/permease protein [Streptococcus pyogenes str. Manfredo] Length = 724 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 57/168 (33%), Positives = 98/168 (58%), Gaps = 7/168 (4%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYI 106 + LI +V + RG PL++ IF+G+P++ + F+A I+L+LN AYI Sbjct: 553 LRLISTVFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGGAYI 612 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EI+R I ++P GQ +AS ++GL+ T+R +ILPQ + ++F+ LK T++ Sbjct: 613 AEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLKDTTIV 672 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S I + E+FQT + I++ YQ +Y LA +YLI+ + + ++E Sbjct: 673 SAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLE 720 >gi|19746296|ref|NP_607432.1| hypothetical protein spyM18_1327 [Streptococcus pyogenes MGAS8232] gi|19748486|gb|AAL97931.1| hypothetical protein spyM18_1327 [Streptococcus pyogenes MGAS8232] Length = 724 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 57/168 (33%), Positives = 98/168 (58%), Gaps = 7/168 (4%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYI 106 + LI +V + RG PL++ IF+G+P++ + F+A I+L+LN AYI Sbjct: 553 LRLISTVFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGGAYI 612 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EI+R I ++P GQ +AS ++GL+ T+R +ILPQ + ++F+ LK T++ Sbjct: 613 AEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLKDTTIV 672 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S I + E+FQT + I++ YQ +Y LA +YLI+ + + ++E Sbjct: 673 SAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLE 720 >gi|295092287|emb|CBK78394.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Clostridium cf. saccharolyticum K10] Length = 214 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 63/197 (31%), Positives = 115/197 (58%), Gaps = 12/197 (6%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----ISLIMHFYVWIFRGTPLL 71 L + VTL ++ + ++ ++GF +A++R+ + ++ + YV I RGTP+L Sbjct: 2 LFMQGLGVTLLLSLVIVIVGTLLGFLLAMLRLSNWKIVKIRPLNALAGIYVEIVRGTPML 61 Query: 72 VQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +QL+ ++ LP + V ++L LN +AY+SE+IRS I ++ KGQ +A+ ++G Sbjct: 62 LQLYFFYFMLPMAFPSMNLSPIVCCAVALCLNSAAYVSEVIRSGIQAVDKGQMEAARSLG 121 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE---IFQTAQRIVSTTY 186 L +Q + +ILPQ I L +EF+ ++K TS+AST + E ++QT + ++ + Sbjct: 122 LNHRQAMVKVILPQAIKNIMPALGNEFVMMIKDTSLASTFFVGELMTVWQTVRGVLYLSL 181 Query: 187 QPLIIYCELAFVYLILT 203 +PLII + +Y I+T Sbjct: 182 EPLII---VGCIYFIVT 195 >gi|269797367|ref|YP_003311267.1| polar amino acid ABC transporter inner membrane subunit [Veillonella parvula DSM 2008] gi|269093996|gb|ACZ23987.1| polar amino acid ABC transporter, inner membrane subunit [Veillonella parvula DSM 2008] Length = 218 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 57/174 (32%), Positives = 102/174 (58%), Gaps = 10/174 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFV 76 + VT+ + CI +++S+ G +A++R+ + + L+ F +V++ RGTPL++Q+ Sbjct: 15 GLKVTVSLFCIVWILSIPGGILMAMLRL----SKLPLVDKFVDAFVYLMRGTPLMLQILF 70 Query: 77 IFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 ++Y LP I I D A +++ LN++AY+ EI R I SI +GQ++ + +G T Sbjct: 71 VYYALPIITDGAIQMDDATAAVLTFVLNYAAYLCEIFRGGIQSISRGQYEGAKVLGFTYA 130 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 QT+R IILPQ PL++E I++LK TS+ + + +I + + IV + Sbjct: 131 QTMRKIILPQMFKRVLPPLANETINLLKDTSLVYVLAMNDILRITKSIVQRDFD 184 >gi|148826213|ref|YP_001290966.1| arginine transporter permease subunit ArtM [Haemophilus influenzae PittEE] gi|229846208|ref|ZP_04466320.1| arginine transporter permease subunit ArtM [Haemophilus influenzae 7P49H1] gi|148716373|gb|ABQ98583.1| arginine transport system permease protein [Haemophilus influenzae PittEE] gi|229811212|gb|EEP46929.1| arginine transporter permease subunit ArtM [Haemophilus influenzae 7P49H1] Length = 227 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 112/197 (56%), Gaps = 15/197 (7%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 I+F ++L + F +++ + I ++ Y+ +F GTPLLVQ F+I+ G + D Sbjct: 26 IAFCLALFLTFLLSM-----ENKWIKRAVNLYLTLFTGTPLLVQFFLIYAGPGQFQWIID 80 Query: 90 S---------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 S + +++L LN +AY +++ ++ +IPKGQW++ A+GL+R QT++ I+ Sbjct: 81 SSLWYVLSNAWFCAVLALALNSAAYSTQLFHGAVKAIPKGQWESCAALGLSRLQTLK-IL 139 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 +P + + S+E I + K T++ASTITI +I A+++ T Y + IY +YL Sbjct: 140 IPYALKRALPSYSNEIILVFKGTALASTITIMDIMGYARQLYGTEYDAITIYGIAGGIYL 199 Query: 201 ILTSFCYIIQIKIESSV 217 I+T ++ K+E V Sbjct: 200 IITGIATLLLRKLEKKV 216 >gi|328956045|ref|YP_004373378.1| amino acid ABC transporter membrane protein, PAAT family [Coriobacterium glomerans PW2] gi|328456369|gb|AEB07563.1| amino acid ABC transporter membrane protein, PAAT family [Coriobacterium glomerans PW2] Length = 421 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 68/196 (34%), Positives = 114/196 (58%), Gaps = 3/196 (1%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +++ SFP +L +++L IA ISF +++ G +A++R S ++ I YV I RG Sbjct: 191 ILVTSFPVVLQG-FLMSLAIAAISFPLAIPCGLLLAIMRRARS-AVLRGIATTYVNIVRG 248 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TP+ +Q+++ F+GLP G+ F II + +N AY+ EI R+ I SI GQ +A+ + Sbjct: 249 TPMFLQIYIAFFGLPLAGVQVAPFALGIIVMFMNSGAYLCEIFRAGIASIDIGQGEAARS 308 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+TR QT+ +I+PQ L++EFI + K TS+ + + E+ A+ IV+ T Sbjct: 309 LGMTRSQTMVDVIVPQMFRAVIPNLTNEFILLYKDTSLLAAVGTMELVMYAKTIVANTGS 368 Query: 188 PLIIYCELAFVYLILT 203 + Y A YL++T Sbjct: 369 -ITPYIVAAAFYLVIT 383 >gi|300362120|ref|ZP_07058297.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] gi|300354739|gb|EFJ70610.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] Length = 216 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 115/200 (57%), Gaps = 8/200 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W N I Q L+ I V+L +SF++ L+ GF I ++I + TI+ F + Sbjct: 8 YSWIN--IRFLLQGLWVTIYVSLISIALSFILGLVFGF-IRYVKIKYLSTIVG----FVI 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP +GIV + VA II+L + A ++EI+RS I ++ GQ Sbjct: 61 DIIRNLPLLLIIFFTYFGLPELGIVTNPTVASIIALVVFEGAMLAEIVRSGIAAVDPGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + G+T Q + H+I+PQ + L S+F+S++K TS+A+ I +PE+ AQ I Sbjct: 121 EGARSNGMTYMQAMYHVIIPQALNKMIPSLLSQFVSLVKDTSLATIIVLPELLFHAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLI 201 S LI +Y +A +Y I Sbjct: 181 SQNTTYLIPMYVIIAIMYFI 200 >gi|225350854|ref|ZP_03741877.1| hypothetical protein BIFPSEUDO_02428 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158310|gb|EEG71552.1| hypothetical protein BIFPSEUDO_02428 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 327 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 72/239 (30%), Positives = 126/239 (52%), Gaps = 31/239 (12%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++EW + F + + I TL + IS I++I+ +AV+R + ++ + FY Sbjct: 50 RFEWNVVWKYLFNENVLEGIKYTLLLTVISMGIAIILAVILAVMRKSI-NPVLRGVSWFY 108 Query: 62 VWIFRGTPLLVQLFVIFYGL-----PHIGI----------------VFDSFVAIIISLTL 100 +W FRGTP+ QL +F+GL P IG+ V +F A + L L Sbjct: 109 IWFFRGTPVYTQL--VFWGLFAVLVPRIGVGIPFTSIEFWSIDSQSVITAFNAAWLGLAL 166 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N +AY++EI+R+ + ++ GQ +A+ A+G+ R +R ++LPQ + P +EFI +L Sbjct: 167 NEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRSMIMRRVVLPQAMRIIIPPTGNEFIGML 226 Query: 161 KSTSVASTITIPEIFQTAQRIVSTT-YQP---LIIYCELAFVYLILTSFCYIIQIKIES 215 K+TS+ + + Q A ++T Y+P LI+ C YL++TS ++Q ++E Sbjct: 227 KTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVAC---IWYLVITSILMVLQSRLEK 282 >gi|293377065|ref|ZP_06623275.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] gi|292644281|gb|EFF62381.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] Length = 220 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 56/149 (37%), Positives = 90/149 (60%), Gaps = 3/149 (2%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +++ + FY+ FRG P LV LF++++GLP+ + A +I T+ SA+I EI R S Sbjct: 55 LNVFIRFYLSFFRGIPALVLLFLLYFGLPY---QLSALTASVICFTITSSAFIGEIYRGS 111 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + + GQWDA A G + +++I+LPQ S LS+ + ++K TS+A+TIT+PE Sbjct: 112 LAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAMDLVKGTSLAATITVPE 171 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 IFQ A+ I T+ +Y +A +Y I+ Sbjct: 172 IFQKAKIIGGRTFDYFSLYILVALIYWII 200 >gi|270261784|ref|ZP_06190057.1| transporter [Serratia odorifera 4Rx13] gi|270045268|gb|EFA18359.1| transporter [Serratia odorifera 4Rx13] Length = 305 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 73/235 (31%), Positives = 128/235 (54%), Gaps = 27/235 (11%) Query: 2 KYEWFNLIIDSFPQL-LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++EW ++ ++F + + +++TL + IS + G +A++R+ + +++ + F Sbjct: 45 RFEW-AVVAENFTEASIINGVIMTLKLTVISVIFGFAGGVLLALMRLSANPVLVA-VSWF 102 Query: 61 YVWIFRGTPLLVQLFVIFYGL-----------PHIGIV--------FDSFVAIIISLTLN 101 Y W FR P+LVQLF ++Y + P +G V +F A +I+L ++ Sbjct: 103 YTWFFRAVPMLVQLF-LWYNIAALYPRISLWIPFLGEVASAPTNTIISTFSAAVIALVMH 161 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 SAY +EI+R+ I S+ GQ +A+ A+G R Q + ++LPQ + T P +E I LK Sbjct: 162 QSAYAAEIVRAGIQSVGSGQLEAAKALGYRRGQILWRVVLPQAMRTILPPAGNEVIGQLK 221 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 +T+V S I + ++ +AQ I TY+ PL++ L YL++TS I Q IE Sbjct: 222 TTAVVSVIALQDVLYSAQIIYQRTYEVIPLLLVATL--WYLVMTSILSIGQHYIE 274 >gi|315283402|ref|ZP_07871606.1| L-cystine transport system permease protein TcyL [Listeria marthii FSL S4-120] gi|313612951|gb|EFR86889.1| L-cystine transport system permease protein TcyL [Listeria marthii FSL S4-120] Length = 238 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 64/188 (34%), Positives = 105/188 (55%), Gaps = 12/188 (6%) Query: 25 LPIACISFVISLIIGFFIAVI----RIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG 80 LPI +SLI GF + VI RI+ +++ Y+ FRGTP++VQLF++FYG Sbjct: 21 LPITLYILALSLIFGFILGVILSLPRIY-KIPVLNQFARVYISFFRGTPIMVQLFIVFYG 79 Query: 81 LPHIGIVF-------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 +P + VF D A I + L+ +A I+E+IR+ + S+ GQ +A+Y++GL + Sbjct: 80 IPALSSVFGIDLSQMDPLYAAIATYALSSAATIAEVIRAGVNSVDAGQAEAAYSVGLNGR 139 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 QT IILPQ + + + I LK TS+A +I + ++ Q +++ + L +Y Sbjct: 140 QTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALEVYI 199 Query: 194 ELAFVYLI 201 L+ +Y I Sbjct: 200 SLSIIYYI 207 >gi|291544977|emb|CBL18086.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Ruminococcus sp. 18P13] Length = 216 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 57/173 (32%), Positives = 99/173 (57%), Gaps = 7/173 (4%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI--GIVFDS---FVAIIISLTLNFSAYIS 107 ++ + FY+ + RGTPL++QL V++YG P+ GI + F+A+II LN++AY + Sbjct: 45 VLRFLTQFYISVMRGTPLMLQLLVVYYG-PYFIFGIRITNEYRFIAVIIGFVLNYAAYFA 103 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 EI R I SIP GQ++A+ +G +R Q II+PQ I L++E I+++K TS++ Sbjct: 104 EIYRGGIQSIPVGQYEAAKVLGYSRAQCFGRIIMPQVIKRIIPALTNEIITLIKDTSLSF 163 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + +PE+F TA+ I + + + + Y + I K+E ++ + Sbjct: 164 ALAVPEMFTTAKAIAAAD-KTMTAFAAAGVFYYVFNLLVAGIMRKVEQKLSYY 215 >gi|115359033|ref|YP_776171.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria AMMD] gi|115284321|gb|ABI89837.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia ambifaria AMMD] Length = 231 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 73/230 (31%), Positives = 124/230 (53%), Gaps = 12/230 (5%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 ++ +LI+ S P + I +TL + +S ++ + +AV R + +S ++ Sbjct: 3 DFLSLIVQSGPDVARG-IWITLELLVLSCTLAFALAVPLAVARTS-ACRWLSTPTRLFMS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIV---------FDSFVAIIISLTLNFSAYISEIIRSSI 114 +FRGTPLLVQ+FV++YGL IV SF + +LTLN +AY++E IR I Sbjct: 61 VFRGTPLLVQIFVLYYGLAQFSIVRASPLWLLVGGSFSCALCALTLNLAAYMAEDIRGGI 120 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +P G+ +A+ A G++R +I+P+ I A L +E + LKST++ASTIT+ ++ Sbjct: 121 AGVPAGEKEAALAFGMSRFMLTWFVIVPRAIGIVAPTLGNEIVLQLKSTALASTITVLDL 180 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 A+RI TY + VY+ +T+ + ++E + +H SV Sbjct: 181 TGVARRISIETYTTDALMLA-GIVYVGITAVLSTVLKRVEGLLNRHLGSV 229 >gi|116254188|ref|YP_770026.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115258836|emb|CAK09942.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 222 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 3/205 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M+Y FN + D L Y A TL + + V+ +++ A R + L+ Sbjct: 1 MRYSLDFNWLWDGMGALAYGA-GTTLALTVSTSVLGIVLSILGAAARRGPYPWLRKLV-G 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV I R TP LVQLF IF+GLP +GI D A ++++TLN +AY E++ + + +IP+ Sbjct: 59 LYVEIMRNTPFLVQLFFIFFGLPSLGIRLDPITAAVLAMTLNMAAYTIEVVGAGLDAIPR 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ A+GL + IILPQ I L+S+ I ++ ++V S I++ E+ Q A Sbjct: 119 GQKEAAQALGLRPRLVFFKIILPQAIAIIFPALTSQIIIMMLESAVVSQISVRELAQEAD 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTS 204 + S T++ Y +YL +++ Sbjct: 179 LLQSRTFRSFETYLVATLIYLSMSA 203 >gi|62185155|ref|YP_219940.1| ABC transporter, membrane permease [Chlamydophila abortus S26/3] gi|62148222|emb|CAH63981.1| ABC transporter, membrane permease [Chlamydophila abortus S26/3] Length = 215 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 61/183 (33%), Positives = 108/183 (59%), Gaps = 9/183 (4%) Query: 34 ISLIIGFFIAVI-----RIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF 88 IS++ G F+ VI +F I + + YV + RGTPL +Q+ + ++GLP I I Sbjct: 24 ISILCGSFLGVIIGTMTSRYFPCRITRCLGNLYVTVIRGTPLFIQILIFYFGLPSI-IRL 82 Query: 89 DS--FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 D +A +I+L++N SAY++E IR I ++ GQW+++ +G + Q +II PQ Sbjct: 83 DPTPLMAGLIALSINSSAYLAENIRGGINALSVGQWESAKVLGYKKSQIFFYIIYPQVFK 142 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS-F 205 L++EF++++K +S+ + +PE+ + ++ IVS P+ +Y A +YL++TS F Sbjct: 143 NILPSLTNEFVALIKESSILMVVGVPELTKVSKDIVSRELNPMEMYSICAALYLLMTSLF 202 Query: 206 CYI 208 Y+ Sbjct: 203 SYV 205 >gi|282891083|ref|ZP_06299588.1| hypothetical protein pah_c045o107 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499076|gb|EFB41390.1| hypothetical protein pah_c045o107 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 147 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 52/137 (37%), Positives = 88/137 (64%), Gaps = 1/137 (0%) Query: 74 LFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 + +++Y LP IG+ FVA + +L +N +AYISEI+R I +IP+GQW+A++ IGL Sbjct: 1 MLIVYYALPEVIGLSLSPFVAGVTALGINSTAYISEIVRGGINAIPEGQWEAAHVIGLKP 60 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT++ IILPQ + + L++E +++K TS+ I + E+ + ++ IV+ P+ IY Sbjct: 61 WQTLKGIILPQMLRITLPSLTNELTALIKETSILMVIGVAELTKVSKDIVTRELDPMTIY 120 Query: 193 CELAFVYLILTSFCYII 209 A +YL++TS I+ Sbjct: 121 LTAACLYLVMTSSVSIL 137 >gi|257865888|ref|ZP_05645541.1| binding-protein-dependent transport system inner membrane component [Enterococcus casseliflavus EC30] gi|257875515|ref|ZP_05655168.1| polar amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|325569898|ref|ZP_08145892.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Enterococcus casseliflavus ATCC 12755] gi|257799822|gb|EEV28874.1| binding-protein-dependent transport system inner membrane component [Enterococcus casseliflavus EC30] gi|257809681|gb|EEV38501.1| polar amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|325157021|gb|EGC69189.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Enterococcus casseliflavus ATCC 12755] Length = 229 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 59/156 (37%), Positives = 98/156 (62%), Gaps = 11/156 (7%) Query: 59 HFYVWIFRGTPLLVQLFVIF------YGLP--HIGIV---FDSFVAIIISLTLNFSAYIS 107 + Y+ + RGTP+LVQ+ + F + LP IG++ F II+L+LN AY++ Sbjct: 54 NAYIEVIRGTPMLVQILIAFGLLQGMFALPTVSIGVLSLDFGRLFPGIIALSLNSGAYVA 113 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 EI+R I ++ GQ +A+ ++GL QT+R+++LPQ + PL +EFI ++K +S+ S Sbjct: 114 EIVRGGINAVDYGQTEAAGSLGLRPFQTMRYVVLPQALRNILPPLGNEFIVLIKDSSLLS 173 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 TI I E+ +AQ +V++++QPL + A +Y ILT Sbjct: 174 TIGIYELMNSAQIVVTSSFQPLTPFYVAAVIYFILT 209 >gi|94988748|ref|YP_596849.1| glutamine transport system permease protein [Streptococcus pyogenes MGAS9429] gi|94992573|ref|YP_600672.1| glutamine-binding protein / glutamine transport system permease protein glnP [Streptococcus pyogenes MGAS2096] gi|94542256|gb|ABF32305.1| glutamine-binding protein [Streptococcus pyogenes MGAS9429] gi|94546081|gb|ABF36128.1| Glutamine-binding protein / Glutamine transport system permease protein glnP [Streptococcus pyogenes MGAS2096] Length = 724 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 57/168 (33%), Positives = 98/168 (58%), Gaps = 7/168 (4%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYI 106 + LI +V + RG PL++ IF+G+P++ + F+A I+L+LN AYI Sbjct: 553 LRLISTVFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGGAYI 612 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EI+R I ++P GQ +AS ++GL+ T+R +ILPQ + ++F+ LK T++ Sbjct: 613 AEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLKDTTIV 672 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S I + E+FQT + I++ YQ +Y LA +YLI+ + + ++E Sbjct: 673 SAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLE 720 >gi|113460400|ref|YP_718462.1| arginine transporter permease subunit ArtM [Haemophilus somnus 129PT] gi|170717498|ref|YP_001783480.1| arginine ABC transporter permease [Haemophilus somnus 2336] gi|112822443|gb|ABI24532.1| amino acid ABC transporter membrane protein 2, PAAT family [Haemophilus somnus 129PT] gi|168825627|gb|ACA30998.1| binding-protein-dependent transport systems inner membrane component [Haemophilus somnus 2336] Length = 227 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 118/209 (56%), Gaps = 13/209 (6%) Query: 21 IVVTLPIACISFVISLIIGFFIAVIRIF---FSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 I +P + I +++L++ FF+A+ F +SL ++ ++ IF GTPLLVQ F+I Sbjct: 9 IAQGIPTSLILTIVALLVAFFLALTLTFALSMEKKWLSLPINLFLTIFTGTPLLVQFFLI 68 Query: 78 FYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 + G + +SF+ I++L LN +AY +++ ++ +I KGQW++ A+ Sbjct: 69 YAGPGQFSWIVNSFLWPLLSSAWFCAILTLALNSTAYSTQLFYGAVKAISKGQWESCVAL 128 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+R QT++ I++P + + S+E I + K TS+AS ITI +I A+++ T Y Sbjct: 129 GLSRWQTLK-ILVPYALKRALPSYSNEIILVFKGTSLASIITILDIMGYARQLYGTEYDA 187 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSV 217 L IY +YLI+T ++ ++E V Sbjct: 188 LTIYGIAGVIYLIITGIATLLLRRLERKV 216 >gi|300313167|ref|YP_003777259.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300075952|gb|ADJ65351.1| ABC-type amino acid transport system, permease protein [Herbaspirillum seropedicae SmR1] Length = 216 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 61/188 (32%), Positives = 105/188 (55%), Gaps = 1/188 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L A V T+ ++ ++FV + GF IA+ R+ + ++ I Y+ + +G PLLV L Sbjct: 10 EYLLQAAVWTVVLSLVAFVFGGVAGFVIALWRVS-PNAVLRGIASGYIQVVQGIPLLVIL 68 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 FV ++GL G VA IS + +A++ EI R I ++PK QW+AS +G R + Sbjct: 69 FVAYFGLAIAGFKLTPLVAAGISFAIYCAAFLGEIWRGCIQAVPKTQWEASECLGFNRFE 128 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + +ILPQ + + P + I+K+TS+AS I ++ + Q I ++T+QP ++ Sbjct: 129 QLTKVILPQAVKIATPPTVGFMVQIVKNTSLASVIGFVDLSRAGQIINNSTFQPFTVFGC 188 Query: 195 LAFVYLIL 202 +A +Y L Sbjct: 189 VALIYFCL 196 >gi|327189353|gb|EGE56521.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 268 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 116/202 (57%), Gaps = 17/202 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ +A ++ I L IGF +A+ + + + L Y IFRG P L+ LF+I+Y Sbjct: 52 GLQVTVSVAIVTLPIGLAIGFLVALGQQS-EEKPLRLAAGIYTTIFRGLPELLTLFIIYY 110 Query: 80 GL-----------PHIG--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G+ ++G I ++F+A +I+L++ FSAY SE++ S+ +IPKGQ++A Sbjct: 111 GMQMLIQSLLELAGYVGPPIEINAFLAGVIALSVVFSAYCSEVLLSAFRAIPKGQYEAGD 170 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL R +T+R IILPQ + + L++ ++ +LK TS S I++ +I + V T Sbjct: 171 SLGLHRGRTLRLIILPQLVRIALPGLTNLWMVLLKDTSYVSIISLADILRQTSVAVRVTK 230 Query: 187 QPLIIY---CELAFVYLILTSF 205 +P Y C L V IL+SF Sbjct: 231 EPFFFYGIACCLYLVLAILSSF 252 >gi|23501836|ref|NP_697963.1| amino acid ABC transporter permease [Brucella suis 1330] gi|161618909|ref|YP_001592796.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella canis ATCC 23365] gi|163843221|ref|YP_001627625.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis ATCC 23445] gi|254701712|ref|ZP_05163540.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis bv. 5 str. 513] gi|254704254|ref|ZP_05166082.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis bv. 3 str. 686] gi|254719050|ref|ZP_05180861.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella sp. 83/13] gi|256061052|ref|ZP_05451208.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella neotomae 5K33] gi|256369378|ref|YP_003106886.1| amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|260566497|ref|ZP_05836967.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|261325053|ref|ZP_05964250.1| polar amino acid ABC transporter [Brucella neotomae 5K33] gi|261752263|ref|ZP_05995972.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513] gi|261754922|ref|ZP_05998631.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686] gi|265984042|ref|ZP_06096777.1| polar amino acid ABC transporter [Brucella sp. 83/13] gi|297248902|ref|ZP_06932616.1| polar amino acid transport system permease [Brucella abortus bv. 5 str. B3196] gi|306838981|ref|ZP_07471803.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653] gi|306840464|ref|ZP_07473223.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] gi|306843854|ref|ZP_07476449.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] gi|23347772|gb|AAN29878.1| amino acid ABC transporter, permease protein [Brucella suis 1330] gi|161335720|gb|ABX62025.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365] gi|163673944|gb|ABY38055.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445] gi|255999538|gb|ACU47937.1| amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|260156015|gb|EEW91095.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|261301033|gb|EEY04530.1| polar amino acid ABC transporter [Brucella neotomae 5K33] gi|261742016|gb|EEY29942.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513] gi|261744675|gb|EEY32601.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686] gi|264662634|gb|EEZ32895.1| polar amino acid ABC transporter [Brucella sp. 83/13] gi|297174266|gb|EFH33617.1| polar amino acid transport system permease [Brucella abortus bv. 5 str. B3196] gi|306275609|gb|EFM57333.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] gi|306289479|gb|EFM60697.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] gi|306405948|gb|EFM62205.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653] Length = 240 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 112/196 (57%), Gaps = 13/196 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++VT+ +A + + LI+GF +A+ + S+ + L + Y IFRG P L+ LF++++ Sbjct: 22 GLLVTVSLALATLPVGLILGFLVALGKQS-SEPSMRLAANIYTTIFRGLPELLTLFLVYF 80 Query: 80 G-------LPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 G L H+ I ++FVA +++L FS+Y SE+ S+ +IP GQ++ YA Sbjct: 81 GASLGLQRLLHLFGIDANIEINAFVAGMVALGFVFSSYSSEVFLSAFRAIPHGQYEGGYA 140 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL+R+QT+R +I PQ I + L++ ++ +LK TS+ S IT+ +I + T + Sbjct: 141 VGLSRRQTMRMVIFPQLIRIALPGLANLWLVLLKDTSLVSVITLSDILRQTSIAARVTKE 200 Query: 188 PLIIYCELAFVYLILT 203 P + + +YL L Sbjct: 201 PFLFFGIACLLYLALA 216 >gi|313617524|gb|EFR89869.1| L-cystine transport system permease protein TcyL [Listeria innocua FSL S4-378] gi|313622668|gb|EFR93035.1| L-cystine transport system permease protein TcyL [Listeria innocua FSL J1-023] Length = 238 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 64/188 (34%), Positives = 105/188 (55%), Gaps = 12/188 (6%) Query: 25 LPIACISFVISLIIGFFIAVI----RIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG 80 LPI +SLI GF + VI RI+ +++ Y+ FRGTP++VQLF++FYG Sbjct: 21 LPITLYILALSLIFGFILGVILSLPRIY-QIPVLNQFARVYISFFRGTPIMVQLFIVFYG 79 Query: 81 LPHIGIVF-------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 +P + VF D A I + L+ +A I+E+IR+ + S+ GQ +A+Y++GL + Sbjct: 80 IPALSSVFGIDLSQMDPLYAAIATYALSSAATIAEVIRAGVNSVDAGQAEAAYSVGLNGR 139 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 QT IILPQ + + + I LK TS+A +I + ++ Q +++ + L +Y Sbjct: 140 QTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALEVYI 199 Query: 194 ELAFVYLI 201 L+ +Y I Sbjct: 200 SLSIIYYI 207 >gi|239831828|ref|ZP_04680157.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239824095|gb|EEQ95663.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 293 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 65/226 (28%), Positives = 124/226 (54%), Gaps = 12/226 (5%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W + +++ ++ +++TL + +S +I +I I R+ + + L YV+ Sbjct: 67 WRVDLFETYGPRYWSGLLITLKLVAVSIIIGALISLPITAARMSNNRWLRGLAFG-YVYF 125 Query: 65 FRGTPLLVQLFVIFYG-------LPHIGI-VF--DSFVAIIISLTLNFSAYISEIIRSSI 114 FRGTPLL Q F+I+YG L IG+ VF D++ I++ +LN +AY +EI+R +I Sbjct: 126 FRGTPLLAQTFLIYYGFGTFRPFLESIGLWVFFRDAWNCAILAFSLNTAAYQAEILRGAI 185 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+ GQW+ + A+G++++ T +ILPQ + + P +E I ++K +++ + IT+ ++ Sbjct: 186 QSVALGQWEGAAALGISKRVTFWKVILPQALIVALRPYGNEIILMIKGSAIVAIITVLDL 245 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +R S T+ Y A +YL++ + +E +T+H Sbjct: 246 MGETRRAYSRTFD-FQTYLWAAVIYLVIVECLRHVWDFLERRLTRH 290 >gi|227551495|ref|ZP_03981544.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] gi|257884577|ref|ZP_05664230.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257898521|ref|ZP_05678174.1| amino acid ABC transporter [Enterococcus faecium Com15] gi|227179392|gb|EEI60364.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] gi|257820415|gb|EEV47563.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257836433|gb|EEV61507.1| amino acid ABC transporter [Enterococcus faecium Com15] Length = 219 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 56/149 (37%), Positives = 90/149 (60%), Gaps = 3/149 (2%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +++ + FY+ FRG P LV LF++++GLP+ + A +I T+ SA+I EI R S Sbjct: 54 LNVFIRFYLSFFRGIPALVLLFLLYFGLPY---QLSALTASVICFTITSSAFIGEIYRGS 110 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + + GQWDA A G + +++I+LPQ S LS+ + ++K TS+A+TIT+PE Sbjct: 111 LAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAMDLVKGTSLAATITVPE 170 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 IFQ A+ I T+ +Y +A +Y I+ Sbjct: 171 IFQKAKIIGGRTFDYFSLYILVALIYWII 199 >gi|187933393|ref|YP_001887465.1| amino acid ABC transporter amino acid-binding/permease protein [Clostridium botulinum B str. Eklund 17B] gi|188589667|ref|YP_001922409.1| amino acid ABC transporter, amino acid-binding/permease protein [Clostridium botulinum E3 str. Alaska E43] gi|251778834|ref|ZP_04821754.1| amino acid ABC transporter, amino acid-binding/permease protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|187721546|gb|ACD22767.1| amino acid ABC transporter, amino acid-binding/permease protein [Clostridium botulinum B str. Eklund 17B] gi|188499948|gb|ACD53084.1| amino acid ABC transporter, amino acid-binding/permease protein [Clostridium botulinum E3 str. Alaska E43] gi|243083149|gb|EES49039.1| amino acid ABC transporter, amino acid-binding/permease protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 219 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 61/155 (39%), Positives = 93/155 (60%), Gaps = 7/155 (4%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIR 111 I+ +I YV RGTPLLVQ+++I+ GLP IGI I+L LN SAY+SEIIR Sbjct: 48 ILRIIGTAYVEFVRGTPLLVQIYIIYIGLPKLIGIDLPDITTGAIALALNSSAYVSEIIR 107 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + I ++ KGQ +A+ ++G+ +K + +II+PQ L +EFIS++K +S+ S I + Sbjct: 108 AGIEAVDKGQMEAARSLGMNQKTAMINIIIPQAFKNILPALGNEFISVIKESSMVSVIGV 167 Query: 172 PEIFQTAQRIVSTT---YQPLIIYCELAFVYLILT 203 E+ A + T +P+I+ A VY I+T Sbjct: 168 AELMYNANTVKGNTALGLEPVIV---AAIVYFIIT 199 >gi|116252500|ref|YP_768338.1| transmembrane permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115257148|emb|CAK08243.1| putative transmembrane permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 268 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 72/202 (35%), Positives = 115/202 (56%), Gaps = 17/202 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ +A ++ I L IGF +A+ + + + L Y IFRG P L+ LF+I+Y Sbjct: 52 GLQVTVSVAIVTLPIGLAIGFLVALGQQS-EEKPLRLAAGIYTTIFRGLPELLTLFIIYY 110 Query: 80 G--------LPHIG-----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G L +G I ++F+A +I+L++ FSAY SE++ S+ +IPKGQ++A Sbjct: 111 GMQMLIQSLLTFVGYDGPPIEINAFLAGVIALSVVFSAYCSEVLLSAFHAIPKGQYEAGD 170 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+GL R +T+R IILPQ + + L++ ++ +LK TS S I++ +I + V T Sbjct: 171 ALGLHRGRTLRLIILPQLVRIALPGLTNLWMVLLKDTSYVSIISLADILRQTSVAVRVTK 230 Query: 187 QPLIIY---CELAFVYLILTSF 205 +P Y C L V IL+SF Sbjct: 231 EPFFFYGVACCLYLVLAILSSF 252 >gi|269216149|ref|ZP_06160003.1| amino acid ABC transporter, permease protein [Slackia exigua ATCC 700122] gi|269130408|gb|EEZ61486.1| amino acid ABC transporter, permease protein [Slackia exigua ATCC 700122] Length = 217 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 62/181 (34%), Positives = 109/181 (60%), Gaps = 5/181 (2%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 + I + +L V+TL I ++ + SL +G +A+ R+ I S I FY+ I RG Sbjct: 1 MAISTMLSILGQGFVITLEIFFLTLIGSLPLGIVVALARMSRIKPI-SWITKFYISIMRG 59 Query: 68 TPLLVQLFVIFYGLPHI-GIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 TPL++Q+F I++ ++ GI F A I++ +N++AY +EI RS I S+P+GQ++ Sbjct: 60 TPLMLQMFAIYFAPYYVFGIELSPGSKFTATIVAFVVNYAAYFAEIYRSGIQSVPRGQYE 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +G +R QT I+LPQ I + +E ++++K TS+A +I + E+F +A+ I + Sbjct: 120 AAAVLGYSRAQTFMKIVLPQVIKRILPAMGNEVVTLVKDTSLAFSIGVMEMFSSAKAIAA 179 Query: 184 T 184 + Sbjct: 180 S 180 >gi|321313515|ref|YP_004205802.1| putative ABC transporter permease [Bacillus subtilis BSn5] gi|320019789|gb|ADV94775.1| putative ABC transporter (permease) [Bacillus subtilis BSn5] Length = 224 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 122/219 (55%), Gaps = 6/219 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W +I +FP L+ A+ +TL +A + + ++I G +A+I ++ + Y+ Sbjct: 5 DW-EFMISAFPTLI-QALPITLFMAIAAMIFAIIGGLILALITKN-KIPVLHQLSKLYIS 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI---IISLTLNFSAYISEIIRSSIISIPKG 120 FRG P LVQLF+I+YGLP + A+ II L+L +AY++EI R+++ S+ G Sbjct: 62 FFRGVPTLVQLFLIYYGLPQLFPEMSKMTALTAAIIGLSLKNAAYLAEIFRAALNSVDDG 121 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A ++G+T+ Q R IILPQ I + + FI +LK TS+A T+ + E+F + Sbjct: 122 QLEACLSVGMTKFQAYRRIILPQAIRNAIPATGNTFIGLLKETSLAFTLGVMEMFAQGKM 181 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S + Y +A VY +LT ++Q E ++++ Sbjct: 182 YASGNLKYFETYLAVAIVYWVLTIIYSMLQDLFERAMSK 220 >gi|329117083|ref|ZP_08245800.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] gi|326907488|gb|EGE54402.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] Length = 215 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 52/154 (33%), Positives = 93/154 (60%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEI 109 T + ++ FYV RG P++V LFV+++GLP+ G + + +I T+ +AY++E+ Sbjct: 46 KQTWLRQLIKFYVSFMRGVPMIVVLFVLYFGLPYYGFQLPALLCALIGFTMVSAAYMAEV 105 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R SI ++ GQW+A+ A+GL ++ +ILPQ + L + I ++KS+S+ + I Sbjct: 106 FRGSIEAVDFGQWEAARALGLPYASIVKQVILPQAFRIAVPSLGNVIIDMVKSSSLTAMI 165 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 T+P+IFQ A+ I S + + +Y +A +Y +T Sbjct: 166 TVPDIFQNAKIIGSREWDYMSMYILVALIYWGIT 199 >gi|315925477|ref|ZP_07921688.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315621378|gb|EFV01348.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 221 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 115/215 (53%), Gaps = 3/215 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L+ +FP+LL + VTL +S V++ ++G ++ + + + I YV I R Sbjct: 9 ELLAQTFPRLLQG-LAVTLESTLLSLVLAAVVGLLFGLLSVS-RNKVSRAIARVYVDIIR 66 Query: 67 GTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 GTP++VQ F I++G+ + + + A +I+LTLN AY++EI R I S+ KGQ +A+ Sbjct: 67 GTPIIVQAFFIYFGVTSALNMRMEPMTAGVITLTLNAGAYLAEIFRGGIQSVDKGQMEAA 126 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++GL +R +ILPQ I T + ++ I LK +S+ S I + E+ Q + I++ Sbjct: 127 RSLGLPHGMAMRKVILPQAIRTMIPAIVNQCIITLKDSSILSVIGMAELTQVGKLIIANN 186 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + ++ + +Y I+ + +IE + Sbjct: 187 LESFRMWLIVGIMYFIIIMILSWVSKRIEKRLQNG 221 >gi|257887403|ref|ZP_05667056.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257895895|ref|ZP_05675548.1| amino acid ABC transporter [Enterococcus faecium Com12] gi|257823457|gb|EEV50389.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257832460|gb|EEV58881.1| amino acid ABC transporter [Enterococcus faecium Com12] Length = 209 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 56/149 (37%), Positives = 90/149 (60%), Gaps = 3/149 (2%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +++ + FY+ FRG P LV LF++++GLP+ + A +I T+ SA+I EI R S Sbjct: 44 LNVFIRFYLSFFRGIPALVLLFLLYFGLPY---QLSALTASVICFTITSSAFIGEIYRGS 100 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + + GQWDA A G + +++I+LPQ S LS+ + ++K TS+A+TIT+PE Sbjct: 101 LAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAMDLVKGTSLAATITVPE 160 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 IFQ A+ I T+ +Y +A +Y I+ Sbjct: 161 IFQKAKIIGGRTFDYFSLYILVALIYWII 189 >gi|254250730|ref|ZP_04944049.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia cenocepacia PC184] gi|124879864|gb|EAY67220.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia cenocepacia PC184] Length = 245 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 98/172 (56%), Gaps = 2/172 (1%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVIFYG 80 +TL + ++ V+ + +G A + + L ++ YV R TP +VQLF IF+G Sbjct: 40 ITLALTAVATVLGVAVGVLGAAAYSADARAAVRLRPLIGAYVEAIRNTPFVVQLFFIFFG 99 Query: 81 LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 LP +G+ D + A I+++TLN AY EI+R+ + ++PKG +A+ A+ ++R Q +RH++ Sbjct: 100 LPALGVHIDEYTAAILAMTLNLGAYSVEIVRAGVAAVPKGHLEAASALAMSRAQMLRHVV 159 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 LPQ + LSS+ + + ++V S I++ ++ A I S ++ Y Sbjct: 160 LPQALAKVFPALSSQIVITMLGSAVVSQISVADLTYAASYIQSRNFRAFETY 211 >gi|226310805|ref|YP_002770699.1| glutamine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226093753|dbj|BAH42195.1| glutamine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 217 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 5/182 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVIFYGL 81 TL + ++ V S ++G A+ RI I L I Y+ R PL++ +F+ F GL Sbjct: 21 TLQASLLALVGSFVLGTLFAIFRI---SPIRPLKWIATAYIEFVRNIPLILVVFLFFVGL 77 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 P IGI+ + F+A + LT+ +A+I+E IR+ I +IPKGQ +A+ + GLT QT+R+IIL Sbjct: 78 PAIGIILEPFIAGTLGLTVYTAAFIAETIRAGIQAIPKGQTEAARSSGLTYGQTMRYIIL 137 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ I P+ ++FI+++K++SV I ++ I + T+ +Y +A YLI Sbjct: 138 PQAIKVVIPPMGNQFINLVKNSSVLGVIAGLDLMYYGDLISADTFVTFDVYIFVAVFYLI 197 Query: 202 LT 203 LT Sbjct: 198 LT 199 >gi|307544138|ref|YP_003896617.1| ABC transporter permease [Halomonas elongata DSM 2581] gi|307216162|emb|CBV41432.1| ABC-type transport system permease protein [Halomonas elongata DSM 2581] Length = 243 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 64/193 (33%), Positives = 110/193 (56%), Gaps = 10/193 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +V T+ + +S +I L++ +A+ R I L + FY ++FRGTPLLVQL++I+Y Sbjct: 29 GLVTTVQLVFLSLIIGLVLAVPLAIGR-GSKHAWIRLPIFFYCYVFRGTPLLVQLYLIYY 87 Query: 80 GLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 G+ + + D+ FV +I+ TLN AY +EI R +I S PKG+ +A+ A G+ Sbjct: 88 GVVFVEGIQDTWLWVILEKPFVPALIAFTLNTGAYTTEIFRGAIKSTPKGEIEAARAYGM 147 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 +R +R I+LP + +E I +L ++++AS +TI ++ A+ + + Y P Sbjct: 148 SRALMLRRIVLPSAFRRALPAYGNEVIFMLHASAIASVVTIMDLTGAARFVYARFYAPFD 207 Query: 191 IYCELAFVYLILT 203 + +A +YL LT Sbjct: 208 AFLFVAAIYLCLT 220 >gi|157370602|ref|YP_001478591.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157322366|gb|ABV41463.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 305 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 71/234 (30%), Positives = 125/234 (53%), Gaps = 25/234 (10%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++EW + + + + +++TL + IS + G +A++R+ + +++ + FY Sbjct: 45 RFEWAVVAENFTEESIINGVIMTLKLTVISVIFGFAGGVLLALMRLSANPVLVA-VSWFY 103 Query: 62 VWIFRGTPLLVQLFVIFYGL-----------PHIGIV--------FDSFVAIIISLTLNF 102 W FR P+LVQLF ++Y + P +G V +F A +I+L ++ Sbjct: 104 TWFFRAVPMLVQLF-LWYNIAALYPRISLWIPFLGEVASAPTNTIISTFSAAVIALVMHQ 162 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 SAY +EI+R+ I S+ GQ +A+ A+G R Q + ++LPQ + T P +E I LK+ Sbjct: 163 SAYAAEIVRAGIQSVGSGQLEAAKALGYRRGQILWRVVLPQAMRTILPPAGNEVIGQLKT 222 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 T+V S I + ++ +AQ I TY+ PL++ L YL++TS I Q +E Sbjct: 223 TAVVSVIALQDVLYSAQIIYQRTYEVIPLLLVATL--WYLVMTSILSIGQHYVE 274 >gi|16801504|ref|NP_471772.1| hypothetical protein lin2442 [Listeria innocua Clip11262] gi|16414964|emb|CAC97669.1| lin2442 [Listeria innocua Clip11262] Length = 238 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 64/188 (34%), Positives = 105/188 (55%), Gaps = 12/188 (6%) Query: 25 LPIACISFVISLIIGFFIAVI----RIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG 80 LPI +SLI GF + VI RI+ +++ Y+ FRGTP++VQLF++FYG Sbjct: 21 LPITLYILALSLIFGFILGVILSLPRIY-QIPVLNQFARVYISFFRGTPIMVQLFIVFYG 79 Query: 81 LPHIGIVF-------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 +P + VF D A I + L+ +A I+E+IR+ + S+ GQ +A+Y++GL + Sbjct: 80 IPALSGVFGIDLSQMDPLYAAIATYALSSAATIAEVIRAGVNSVDAGQAEAAYSVGLNGR 139 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 QT IILPQ + + + I LK TS+A +I + ++ Q +++ + L +Y Sbjct: 140 QTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALEVYI 199 Query: 194 ELAFVYLI 201 L+ +Y I Sbjct: 200 SLSIIYYI 207 >gi|126652698|ref|ZP_01724859.1| amino acid ABC transporter, permease protein [Bacillus sp. B14905] gi|126590547|gb|EAZ84665.1| amino acid ABC transporter, permease protein [Bacillus sp. B14905] Length = 235 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 116/206 (56%), Gaps = 18/206 (8%) Query: 33 VISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVIFYGLPH-IGIVFD 89 ++ ++IG IA +RI II L ++FYV FRGTP+++ + ++++GLP + +V + Sbjct: 31 LLGIVIGILIAFVRI---KQIIFLTPFLNFYVSFFRGTPIIMHIMLVYFGLPMLVDVVAN 87 Query: 90 SF------------VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 +F +I++LT + AY SEIIRS I+S+PKGQ +A+YAIGLT Q +R Sbjct: 88 TFHLSFQSSSIPILFFVILALTFSAGAYSSEIIRSGILSVPKGQLEAAYAIGLTFTQAMR 147 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 ILPQ S ++ FI L +TS+A ++I E+ A + S + L + + Sbjct: 148 RYILPQAFGKSIPNFTNVFIGFLHATSLAFFLSIKELTGVANIVASVNLKFLEAFIAVGI 207 Query: 198 VYLILTSFCYIIQIKIESSVTQHTYS 223 +Y ++ I +IE VT ++ S Sbjct: 208 IYWGISIITEWISHRIEKRVTAYSKS 233 >gi|84393753|ref|ZP_00992501.1| amino acid ABC transporter, permease protein [Vibrio splendidus 12B01] gi|84375615|gb|EAP92514.1| amino acid ABC transporter, permease protein [Vibrio splendidus 12B01] Length = 225 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 114/203 (56%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LII+S P L + + T + C++ +I L + +A+ R + +I+ +++ F Sbjct: 3 FSLIIESLPIYL-SGLWTTAWMVCVALIIGLCVAIPLAIARNS-PNMLINAPAWSFIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQFFPVKDTLWENAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G++ +T R IILP + + S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMSTPKTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFESFLTAGLFYMGLT 203 >gi|70733845|ref|YP_257485.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68348144|gb|AAY95750.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 229 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 123/211 (58%), Gaps = 16/211 (7%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFY 61 EW +I P+ + A +TL + I+ ++ L++ + + R S + + + + Y Sbjct: 2 EW-EVIYKWLPKFIQGA-TLTLELVGIAVILGLLLAIPLGIAR---SSKLWYVRALPYAY 56 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRS 112 ++ FRGTPLLVQLF+++YGL V DSF+ ++TL+ +AYI+EI+R Sbjct: 57 IFFFRGTPLLVQLFLVYYGLAQFDAVRDSFMWPYLRDPFWCATATMTLHTAAYIAEILRG 116 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I +IP G+ +A+ A+G++R + + +IILP+ S+E I +LK++S+AST+T+ Sbjct: 117 AIQAIPPGEIEAARALGMSRPKALFYIILPRAARIGLPAYSNEVILMLKASSLASTVTLL 176 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+ A+ I++ Y + ++ YL+++ Sbjct: 177 ELTGMARTIIARNYLTVDMFFTAGVFYLLMS 207 >gi|94990641|ref|YP_598741.1| glutamine-binding protein / glutamine transport system permease protein glnP [Streptococcus pyogenes MGAS10270] gi|94544149|gb|ABF34197.1| Glutamine-binding protein / Glutamine transport system permease protein glnP [Streptococcus pyogenes MGAS10270] Length = 724 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 57/168 (33%), Positives = 98/168 (58%), Gaps = 7/168 (4%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYI 106 + LI +V + RG PL++ IF+G+P++ + F+A I+L+LN AYI Sbjct: 553 LRLISTVFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGGAYI 612 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EI+R I ++P GQ +AS ++GL+ T+R +ILPQ + ++F+ LK T++ Sbjct: 613 AEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLKDTTIV 672 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S I + E+FQT + I++ YQ +Y LA +YLI+ + + ++E Sbjct: 673 SAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLE 720 >gi|242238357|ref|YP_002986538.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242130414|gb|ACS84716.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 222 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 65/191 (34%), Positives = 108/191 (56%), Gaps = 2/191 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 +P+LL A + VT+ + ++ + + IG A +R T+IS + +YV + R TP +V Sbjct: 14 WPELL-AGLWVTIELTVMATLGGVAIGVLGAALR-SGRPTLISRLWGWYVELIRNTPFVV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I +GLP +G+ ++ A ++++ +N AY +EIIR+ I PKGQW+A+ +GLT+ Sbjct: 72 QLFFIVFGLPGLGLKLNAGQAALLAMLVNLGAYSTEIIRAGIQVTPKGQWEAARVLGLTK 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT +ILP + L S+ I ++ +SV S ++ E+ A I S T+ +Y Sbjct: 132 TQTFLRVILPPALQRIYPALVSQCIIVMLGSSVVSQVSFEELTFAANLIQSRTFLSFEVY 191 Query: 193 CELAFVYLILT 203 YL L+ Sbjct: 192 LVTTLFYLALS 202 >gi|317047287|ref|YP_004114935.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316948904|gb|ADU68379.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 319 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 72/241 (29%), Positives = 131/241 (54%), Gaps = 24/241 (9%) Query: 2 KYEWFNLIIDSFPQL-LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 +EW ++++ F + + + VTL + +S ++ ++G +AV R+ + ++S + Sbjct: 55 NFEW-SVVLKWFTEASVLKGLQVTLGLTVVSMILGTLLGLLLAVWRLS-ENKLLSGLSSL 112 Query: 61 YVWIFRGTPLLVQLFVIFYGL-----------PHIGIVFDSF---------VAIIISLTL 100 Y+W FRGTPLLVQL + +Y L P GI F S+ A I L L Sbjct: 113 YIWFFRGTPLLVQL-IFWYNLSTLFPTLSITIPWTGITFASWNTNDLITPLTAAIAGLAL 171 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N +AY++EIIR+ ++S+ GQ + + A G++R + +R II+PQ + + P ++ IS++ Sbjct: 172 NEAAYMAEIIRAGLLSVDNGQVETTQAFGMSRTRALRRIIIPQAMRSIIPPTGNQLISMI 231 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 K+TS+ S I + ++ + Q + + T++ + + YLI+TS + Q IE + Sbjct: 232 KATSLVSVIAMGDLLYSVQAVYNRTFEIIPMLMVAVIWYLIITSILNVGQSAIERYYARG 291 Query: 221 T 221 T Sbjct: 292 T 292 >gi|66043566|ref|YP_233407.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63254273|gb|AAY35369.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] gi|330971846|gb|EGH71912.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 215 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 93/149 (62%), Gaps = 3/149 (2%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y+ +F+GTPLL+QLF++F+G+ +G+ + A ++LTL SAY++EI R + SI Sbjct: 53 KLYIELFQGTPLLMQLFLVFFGVALMGLNISPWAAAALALTLFTSAYLAEIWRGCVESIS 112 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQW+AS ++ LT + +R++ILPQ + + P + ++K T+V S I E+ +T Sbjct: 113 KGQWEASASLALTPFEQMRYVILPQALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTG 172 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + + T++P ++Y +A Y IL CY Sbjct: 173 SMLANATFEPFMVYGFVALGYFIL---CY 198 >gi|145637072|ref|ZP_01792735.1| arginine transport system permease protein [Haemophilus influenzae PittHH] gi|145269726|gb|EDK09666.1| arginine transport system permease protein [Haemophilus influenzae PittHH] Length = 219 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 112/197 (56%), Gaps = 15/197 (7%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 I+F ++L + F +++ + I ++ Y+ +F GTPLLVQ F+I+ G + D Sbjct: 26 IAFCLALFLTFLLSM-----ENKWIKRAVNLYLTLFTGTPLLVQFFLIYAGPGQFQWIID 80 Query: 90 S---------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 S + +++L LN +AY +++ ++ +IPKGQW++ A+GL+R QT++ I+ Sbjct: 81 SSLWYVLSNAWFCAVLALALNSAAYSTQLFHGAVKAIPKGQWESCAALGLSRLQTLK-IL 139 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 +P + + S+E I + K T++ASTITI +I A+++ T Y + IY +YL Sbjct: 140 IPYALKRALPSYSNEIILVFKGTALASTITIMDIMGYARQLYGTEYDAITIYGIAGGIYL 199 Query: 201 ILTSFCYIIQIKIESSV 217 I+T ++ K+E V Sbjct: 200 IITGIATLLLRKLEKKV 216 >gi|157165596|ref|YP_001466616.1| 6,7-dimethyl-8-ribityllumazine synthase [Campylobacter concisus 13826] gi|112800728|gb|EAT98072.1| ABC-type amino acid transport system, permease component [Campylobacter concisus 13826] Length = 217 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 105/187 (56%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +E+ I+ F L A V+T+ IA + V S++IG F ++ F+ +S ++ Sbjct: 1 MDFEF----IEKFYPLFVKAGVLTIEIAFLGIVFSILIGIFCMAVK-FYKLKFLSKLVDC 55 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TPLL+QLF ++YGLP +G+ F + L+ +Y+SE R ++ K Sbjct: 56 YVELSRNTPLLIQLFFLYYGLPKLGVSMSGFTCAVAGLSFLGGSYMSESFRLGFEAVRKS 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A +I L++ Q +R++ILPQ + + +S+ I +LK TS+ S + + ++ A+ Sbjct: 116 QIEAGLSIALSKNQLLRYVILPQAFSVALPSISANVIFLLKETSIVSIVALADLVYVAKD 175 Query: 181 IVSTTYQ 187 ++ Y+ Sbjct: 176 LIGLYYK 182 >gi|289674515|ref|ZP_06495405.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae FF5] gi|302186818|ref|ZP_07263491.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae 642] gi|330900040|gb|EGH31459.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] gi|330977257|gb|EGH77213.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 215 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 93/149 (62%), Gaps = 3/149 (2%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y+ +F+GTPLL+QLF++F+G+ +G+ + A ++LTL SAY++EI R + SI Sbjct: 53 KLYIELFQGTPLLMQLFLVFFGVALMGLNISPWAAAALALTLFTSAYLAEIWRGCVESIS 112 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQW+AS ++ LT + +R++ILPQ + + P + ++K T+V S I E+ +T Sbjct: 113 KGQWEASASLALTPFEQMRYVILPQALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTG 172 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + + T++P ++Y +A Y IL CY Sbjct: 173 SMLANATFEPFMVYGFVALGYFIL---CY 198 >gi|258543562|ref|YP_003188995.1| amino acid ABC transporter permease [Acetobacter pasteurianus IFO 3283-01] gi|256634640|dbj|BAI00616.1| amino acid transport permease protein [Acetobacter pasteurianus IFO 3283-01] gi|256637696|dbj|BAI03665.1| amino acid transport permease protein [Acetobacter pasteurianus IFO 3283-03] gi|256640750|dbj|BAI06712.1| amino acid transport permease protein [Acetobacter pasteurianus IFO 3283-07] gi|256643805|dbj|BAI09760.1| amino acid transport permease protein [Acetobacter pasteurianus IFO 3283-22] gi|256646860|dbj|BAI12808.1| amino acid transport permease protein [Acetobacter pasteurianus IFO 3283-26] gi|256649913|dbj|BAI15854.1| amino acid transport permease protein [Acetobacter pasteurianus IFO 3283-32] gi|256652903|dbj|BAI18837.1| amino acid transport permease protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655957|dbj|BAI21884.1| amino acid transport permease protein [Acetobacter pasteurianus IFO 3283-12] Length = 519 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 53/142 (37%), Positives = 89/142 (62%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + RGTPLL+Q+ IFYGLP GI F+A ++SL +N++AY +E R+ + S+ G Sbjct: 355 YVEVVRGTPLLIQVLFIFYGLPEFGISLTPFLAGVVSLGMNYAAYEAENYRAGLQSVAHG 414 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+ +T Q +R++++PQ ++++FIS+LK +S+ S IT+ E+ QT R Sbjct: 415 QMEAALALNMTHAQALRYVVVPQAFRLVMPVMTNDFISLLKDSSLVSVITLTELTQTYIR 474 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 + S+ + + YL+L Sbjct: 475 LSSSYFDYFGTGLMVGAAYLLL 496 >gi|241113736|ref|YP_002973571.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861944|gb|ACS59610.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 309 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 64/217 (29%), Positives = 121/217 (55%), Gaps = 25/217 (11%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + V+L + ++ I +++G +A+ R+ +D + + ++W FRGTPLLVQL + +Y Sbjct: 72 GLYVSLGLTVVAMAIGIVLGLGLAIARLS-NDRLARSLASLFIWFFRGTPLLVQL-IFWY 129 Query: 80 GL----PHIGI---------------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 L P + I V A I+ L LN +AY++EIIR ++S+ +G Sbjct: 130 NLSTLFPQLSIAIPFGPTLASWETNSVITPMTAAIVGLALNEAAYMAEIIRGGLLSVDRG 189 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++ + A G+T+ + + II+PQ + + P ++ IS++K+TS+ S I + ++ + Q Sbjct: 190 QFETAEAFGMTKARALWRIIIPQAMRSIVPPTGNQLISMIKATSLVSVIAMADLLYSVQS 249 Query: 181 IVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIES 215 I + T++ P+++ L YL++TS + Q IE+ Sbjct: 250 IYNRTFEIVPMLLVAVL--WYLLITSILNLGQSYIEA 284 >gi|241205009|ref|YP_002976105.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858899|gb|ACS56566.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 268 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 115/202 (56%), Gaps = 17/202 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ +A ++ I L IGF +A+ + + + L Y IFRG P L+ LF+I+Y Sbjct: 52 GLQVTISVAIVTLPIGLAIGFLVALGQQS-EEKPLRLAAGIYTTIFRGLPELLTLFIIYY 110 Query: 80 G--------LPHIG-----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G L +G I ++F+A +I+L++ FSAY SE++ S+ +IPKGQ++A Sbjct: 111 GMQMLIQSLLTFVGYDGPPIEINAFLAGVIALSVVFSAYCSEVLLSAFRAIPKGQYEAGD 170 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+GL R +T+R I+LPQ + + L++ ++ +LK TS S I++ +I + V T Sbjct: 171 ALGLHRGRTLRLIVLPQLVRIALPGLTNLWMVLLKDTSYVSIISLADILRQTSVAVRVTK 230 Query: 187 QPLIIY---CELAFVYLILTSF 205 +P Y C L V IL+SF Sbjct: 231 EPFFFYGLACCLYLVLAILSSF 252 >gi|50914391|ref|YP_060363.1| glutamine transport system permease protein [Streptococcus pyogenes MGAS10394] gi|50903465|gb|AAT87180.1| Glutamine-binding protein [Streptococcus pyogenes MGAS10394] Length = 724 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 57/168 (33%), Positives = 98/168 (58%), Gaps = 7/168 (4%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYI 106 + LI +V + RG PL++ IF+G+P++ + F+A I+L+LN AYI Sbjct: 553 LRLISTVFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGGAYI 612 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EI+R I ++P GQ +AS ++GL+ T+R +ILPQ + ++F+ LK T++ Sbjct: 613 AEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLKDTTIV 672 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S I + E+FQT + I++ YQ +Y LA +YLI+ + + ++E Sbjct: 673 SAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLE 720 >gi|241206674|ref|YP_002977770.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860564|gb|ACS58231.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 222 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 111/205 (54%), Gaps = 3/205 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M+Y FN + D L Y A TL + + V+ +++ A R + ++ Sbjct: 1 MRYSLDFNWLWDGMGALAYGA-CTTLALTVSTSVLGIVLSILGAAAR-RGPYPWLRKVVG 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV I R TP LVQLF IF+GLP +GI D A ++++TLN +AY E++ + + +IP+ Sbjct: 59 LYVEIMRNTPFLVQLFFIFFGLPSLGIRLDPITAAVLAMTLNMAAYTIEVVGAGLDAIPR 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ A+GL + IILPQ I L+S+ I ++ ++V S I++ E+ Q A Sbjct: 119 GQKEAAQALGLRPRLVFFKIILPQAIAIIFPALTSQIIIMMLESAVVSQISVRELAQEAD 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTS 204 + S T++ Y +YL +++ Sbjct: 179 LLQSRTFRSFETYLVATLIYLSMSA 203 >gi|70733920|ref|YP_257560.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68348219|gb|AAY95825.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 320 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 57/162 (35%), Positives = 104/162 (64%), Gaps = 7/162 (4%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV + RGTPLLVQ+F+ ++ IG V + A I +L+L AY++EI+R+ + SI Sbjct: 161 YVELVRGTPLLVQIFIFYF---FIGTVLNLSREFAGIAALSLFTGAYVAEIVRAGVQSIA 217 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+ ++GL+ Q++RH++LPQ PL+ +FIS++K TS+ S I I E+ ++ Sbjct: 218 RGQNEAARSLGLSAGQSMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSG 277 Query: 179 QRIVSTTYQPL-IIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + +++T++ P I++C +A +YL++ + ++E + Q Sbjct: 278 REVITTSFSPFEILFC-VAGLYLLINLPLSKMASRLERRLAQ 318 >gi|163792347|ref|ZP_02186324.1| ABC polar amino acid transporter, inner membrane subunit [alpha proteobacterium BAL199] gi|159182052|gb|EDP66561.1| ABC polar amino acid transporter, inner membrane subunit [alpha proteobacterium BAL199] Length = 221 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 69/192 (35%), Positives = 102/192 (53%), Gaps = 3/192 (1%) Query: 29 CISFV-ISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 C++ V + LI G IA++ I V FR P LV L I+ GLP IGI Sbjct: 32 CLAVVPLGLIGGLLIALV-CLSKHRAIRWPAFVLVDFFRAVPPLVLLIFIYAGLPFIGIR 90 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 F+A+ I+ LN +Y EI R+ I SI KGQW+A+ + GLT QT+ ++++PQ + Sbjct: 91 PSPFMAVCIAFLLNTGSYYGEIYRAGIDSIGKGQWEAARSTGLTTTQTLVYVVIPQAVRN 150 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 L S + ++K TS+AS + +PE+ +A S TY P I A +YLIL C Sbjct: 151 VLPDLVSNTVEVVKLTSIASVVALPELLYSADMARSLTYNPSPIVAA-AVIYLILLWPCV 209 Query: 208 IIQIKIESSVTQ 219 + ++E V + Sbjct: 210 RLLSRLEHRVAR 221 >gi|50122415|ref|YP_051582.1| putative amino acid ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|261822706|ref|YP_003260812.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|49612941|emb|CAG76392.1| putative amino acid ABC transporter, permease protein [Pectobacterium atrosepticum SCRI1043] gi|261606719|gb|ACX89205.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 222 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 66/198 (33%), Positives = 110/198 (55%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ ++ +P+LL A + VT+ + ++ + + IG A +R T++S + YV + Sbjct: 7 FSALLPFWPELL-AGLWVTIELTVMATLGGIAIGICGAALR-SGKPTLLSRLWGIYVELI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP +VQLF I +GLP +G + A ++++ +N AY +EIIR+ I PKGQW+A+ Sbjct: 65 RNTPFVVQLFFIVFGLPSLGWKLTAGEAALLAMLINLGAYSTEIIRAGIQVTPKGQWEAA 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GLTR QT +ILP + L S+ I ++ +SV S ++ E+ A I S T Sbjct: 125 RVLGLTRMQTFLRVILPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFAANLIQSRT 184 Query: 186 YQPLIIYCELAFVYLILT 203 + +Y YL+L+ Sbjct: 185 FLSFEVYLATTLCYLVLS 202 >gi|257790013|ref|YP_003180619.1| polar amino acid ABC transporter, inner membrane subunit [Eggerthella lenta DSM 2243] gi|325830079|ref|ZP_08163536.1| ABC transporter, permease protein [Eggerthella sp. HGA1] gi|257473910|gb|ACV54230.1| polar amino acid ABC transporter, inner membrane subunit [Eggerthella lenta DSM 2243] gi|325487546|gb|EGC89984.1| ABC transporter, permease protein [Eggerthella sp. HGA1] Length = 450 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 119/197 (60%), Gaps = 3/197 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++I+ S P ++++ ++ + + +SF +++ IG + +R+ S + + Y+ I R Sbjct: 198 SIIVTSVP-VVFSGWLIAIALVIVSFPLAIPIGLLWSFMRMAKS-RVPRALGATYINIVR 255 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPL +Q+++ F+GLP +GI D FV I L LN SAY++EI R+ I SI GQ++A+ Sbjct: 256 GTPLFLQIYIAFFGLPLLGIKMDLFVLGAIVLVLNSSAYLAEIFRAGIQSINGGQFEAAR 315 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+ QT+ ++I+PQT+ ++SEFI + K TS+ + + + EI A+ I + T Sbjct: 316 SLGMNGAQTMFYVIIPQTVRRVIPTMTSEFILMYKDTSLLAAVGVMEIMMYAKTITAATG 375 Query: 187 QPLIIYCELAFVYLILT 203 + Y A YLI+T Sbjct: 376 N-VTPYIVAAGFYLIVT 391 >gi|254384681|ref|ZP_05000020.1| permease [Streptomyces sp. Mg1] gi|194343565|gb|EDX24531.1| permease [Streptomyces sp. Mg1] Length = 316 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 115/208 (55%), Gaps = 14/208 (6%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF-----YGL 81 I+ S + L++G AV+R+ + + + Y+W FRGTP+ VQL V F + Sbjct: 84 ISVSSMALGLLLGIVFAVMRLS-KNPVTGAVSWLYIWFFRGTPVYVQLLVWFNLSLIFQY 142 Query: 82 PHIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 ++G ++ + F+ ++ L LN AY++EI+R+ I S+ +GQ +A++A+G+ + Sbjct: 143 INLGPIYKNETVDVMTPFMVALLGLGLNEGAYMAEIVRAGIQSVDEGQTEAAHALGMPQT 202 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 +T+R I+LPQ + P +EFI++LK++S+ S + E+ + + I +T + + Sbjct: 203 KTMRRIVLPQAMRVIIPPTGNEFINMLKTSSLVSAVQYTELLRASSNIGNTAGAIMEMLF 262 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQHT 221 +F YL LTS + Q +E + + Sbjct: 263 VASFWYLALTSVFSVGQYYLERRFARGS 290 >gi|154686886|ref|YP_001422047.1| GlnP [Bacillus amyloliquefaciens FZB42] gi|154352737|gb|ABS74816.1| GlnP [Bacillus amyloliquefaciens FZB42] Length = 218 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 66/163 (40%), Positives = 97/163 (59%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ +VTL +A IS V+S I G +R + I+S I+ V R PLL+ +F Sbjct: 15 LWDGFLVTLYVALISIVLSFIFGLAAGTLR-YAKIPIVSGIIAAIVETIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 F+ LP IGI + A I +LT+ SA +SEIIRS + S+ KGQ +A+ + GLT QT+ Sbjct: 74 TFFALPEIGIKLEITAAAITALTIFESAMLSEIIRSGLQSVDKGQIEAARSSGLTYTQTL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +++PQ + P+ S+FIS+LK TS+A I +PE+ AQ Sbjct: 134 FLVVMPQALRRMVPPIVSQFISLLKDTSLAVVIALPELIHNAQ 176 >gi|154174776|ref|YP_001408465.1| glutamineABC transporter membrane-spanning permease [Campylobacter curvus 525.92] gi|112802739|gb|EAU00083.1| ABC transporter membrane-spanning permease - glutamine transport [Campylobacter curvus 525.92] Length = 217 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 60/182 (32%), Positives = 105/182 (57%), Gaps = 2/182 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F I +P + AA++ T+ IA + SLI+G F +++ + +I LI + Y+ + Sbjct: 3 FEFIAKFYPMYVKAAML-TINIAFWGILFSLIVGMFCTLVKFYKVKFLIPLI-NCYIELS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL+QLF ++YGLP +G+ SF +I LT +Y++E R ++ K Q +A Sbjct: 61 RNTPLLIQLFFLYYGLPKLGVQIGSFTCAVIGLTFLGGSYMAESFRLGFEAVRKSQIEAG 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IGL++ Q +R++I+PQ S +S+ I +LK TS+ S + + ++ A+ I+ Sbjct: 121 LSIGLSQNQLLRYVIVPQAFGVSLPSISANVIFLLKETSIVSIVALADLVYVAKDIIGLY 180 Query: 186 YQ 187 Y+ Sbjct: 181 YK 182 >gi|167769529|ref|ZP_02441582.1| hypothetical protein ANACOL_00863 [Anaerotruncus colihominis DSM 17241] gi|167668497|gb|EDS12627.1| hypothetical protein ANACOL_00863 [Anaerotruncus colihominis DSM 17241] Length = 257 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 111/201 (55%), Gaps = 14/201 (6%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-------------TIISLIMHFYV 62 + +A I +TL ++ +I L+IG + R S I+++I Y+ Sbjct: 15 MFWAGIKITLLVSLTGTIIGLVIGLIVGSARSISSKIEPRDSFATKIVKRIVNVIACVYI 74 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FRGTP++VQ ++YGL + + VA I +++N AY++EI+RS I S+ GQ Sbjct: 75 EFFRGTPMMVQAVFLYYGLKSV-FNWTPVVAGICIISINTGAYMAEILRSGIQSVDVGQT 133 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ +IG+T QT+ H++LPQ I + + +EF+ +K +SV + I++ E+F + +I Sbjct: 134 EAARSIGMTSAQTMLHVVLPQGIKNAFPAIGNEFVVNIKDSSVLNAISVTELFFQSNKIA 193 Query: 183 STTYQPLIIYCELAFVYLILT 203 + + + A +YLILT Sbjct: 194 GSIFDFTATFLVTALIYLILT 214 >gi|42518678|ref|NP_964608.1| glutamine ABC transporter permease component [Lactobacillus johnsonii NCC 533] gi|41582964|gb|AAS08574.1| glutamine ABC transporter permease component [Lactobacillus johnsonii NCC 533] Length = 216 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 117/200 (58%), Gaps = 8/200 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W N I Q L+ I V+L +SFV+ L++GF I ++I + +S I+ F + Sbjct: 8 YSWIN--IRFLLQGLWVTIYVSLISIALSFVLGLVLGF-IRYVKIKY----LSAIVGFVI 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP +GI+ + VA II+L + A ++EI+RS I ++ GQ Sbjct: 61 DIIRNLPLLLIIFFTYFGLPELGIITNPTVASIIALVVFEGAMLAEIVRSGIAAVDPGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + G+T Q + H+I+PQ + L S+F+S++K TS+A+ I +PE+ AQ I Sbjct: 121 EGARSNGMTYMQAMYHVIIPQALNKMIPSLLSQFVSLVKDTSLATIIVLPELLFHAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLI 201 S LI +Y +A +Y I Sbjct: 181 SQNTTYLIPMYVIIAIMYFI 200 >gi|16263639|ref|NP_436432.1| ABC transporter, permease [Sinorhizobium meliloti 1021] gi|14524350|gb|AAK65844.1| ABC transporter, permease [Sinorhizobium meliloti 1021] Length = 304 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 119/214 (55%), Gaps = 21/214 (9%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +T+ + ++ VI +++G A++ + + +IS + + Y+W FRGTP+LVQL + +Y Sbjct: 69 GLSLTVWLTVVTMVIGVVLGTIFAIMAMA-DNVVISTVANAYIWFFRGTPVLVQL-IFWY 126 Query: 80 GL----PH--IGIVFDSF-------------VAIIISLTLNFSAYISEIIRSSIISIPKG 120 L P +G+ F S A ++ L LN AY+SEIIRS ++S+ G Sbjct: 127 NLGALFPQLSVGVPFTSLWVSVPTNTLISPVTAAVLGLGLNEGAYMSEIIRSGLMSVDPG 186 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q A+ ++G+T +T+ I+LPQ + P ++ I +LK++S+ S I++ ++ +AQ Sbjct: 187 QRQAAKSLGMTNGKTLWRILLPQAMPVIIPPTGNQTIGMLKTSSLVSVISLADLLYSAQT 246 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I S +Q + + YL T+ +Q++IE Sbjct: 247 IYSRNFQTIPLLIVACIWYLAATTILSAVQVRIE 280 >gi|306825322|ref|ZP_07458664.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432758|gb|EFM35732.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 213 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 57/164 (34%), Positives = 92/164 (56%), Gaps = 1/164 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ Y+W+ RGTPLL+QL I+Y LP IGI D A +I+ LN++AY +EI R I + Sbjct: 50 LIDLYIWVMRGTPLLLQLIFIYYVLPSIGIRLDRLPAAVIAFVLNYAAYFAEIFRGGIET 109 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQ++A+ + + T+R+IILPQ + +E +S++K TS+ + I ++ Sbjct: 110 IPKGQYEAAKVLKFSSFDTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLI- 168 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 A R + L+ +YLI+ II K+E + + Sbjct: 169 LASRTAANRDASLVPMFLAGAIYLIMIGLVTIIAKKLEKKYSYY 212 >gi|153011343|ref|YP_001372557.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151563231|gb|ABS16728.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 224 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 57/173 (32%), Positives = 105/173 (60%), Gaps = 2/173 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++++ S P L ++ T I S ++ G I+++RI+ ++ + Y+ +FR Sbjct: 11 DVLVSSLPAL-GRGLLNTFLIGIASIFFGVLSGLLISIVRIY-GPKVLRYLAIAYIDVFR 68 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P+LV L +I+Y LP IGI F ++ + I+S ++ +AY +E+ RS I S+P+GQ++A+ Sbjct: 69 AMPVLVVLILIYYALPFIGIRFSAWTSAIMSFSMVMAAYSAEVFRSGIESVPRGQFEAAS 128 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 A+G+ T+ ++LPQ I P +S +S+ K T++AST+ +PE+ + AQ Sbjct: 129 ALGIPFPVTLWKVVLPQAIRIIIPPTTSNCVSMFKDTALASTVALPELLKEAQ 181 >gi|152988501|ref|YP_001351133.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150963659|gb|ABR85684.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 320 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 62/171 (36%), Positives = 102/171 (59%), Gaps = 6/171 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ +S I L IG + R+ + T+ L YV + RGTPLLVQ+F+ ++ Sbjct: 125 TLWLSLVSGAIGLAIGLVAGLCRLSKNPTLHDLST-IYVELVRGTPLLVQIFIFYF---F 180 Query: 84 IGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IG V D A + +L L AY++EIIR+ + SI +GQ +A+ ++GL Q++RH+IL Sbjct: 181 IGTVLDLSREFAGVAALALFTGAYVAEIIRAGVQSIARGQNEAARSLGLNASQSMRHVIL 240 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 PQ PL+ +FIS++K TS+ S I I E+ ++ + ++T++ I+ Sbjct: 241 PQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIW 291 >gi|325125285|gb|ADY84615.1| Glutamine ABC transporter permease component [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 222 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 68/218 (31%), Positives = 125/218 (57%), Gaps = 14/218 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD---TIISLIMHFY 61 W NL + L VT+ ++ IS ++S +IG + +IR D T IS ++ Sbjct: 10 WINL------RFLLQGFWVTIEVSVISIILSFVIGLALGLIRFTRIDAKTTRISKVVGVI 63 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + I R PLL+ +F ++GLP +GI D+F A +I++ + SA I+E++R+ I+++ GQ Sbjct: 64 IDIIRNLPLLLIIFFSYFGLPVMGIRVDAFQASVIAMVVFESAMIAEVVRTGIMAVDPGQ 123 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 + + + G+T Q + H++ PQ ++ L S+F+S++K TS+A+ I +PE+ A+ I Sbjct: 124 MEGARSNGMTYMQAMTHVVFPQALSKMIPALLSQFVSLIKDTSLATIIVLPELLYHAEII 183 Query: 182 VSTTYQPLI-IYCELAFVYLI----LTSFCYIIQIKIE 214 + + +I +Y +A +Y I L+SF + +I+ Sbjct: 184 YNQNTKYMIPMYLAVAVMYFIICFALSSFANYLSKRIK 221 >gi|94994565|ref|YP_602663.1| glutamine-binding protein / glutamine transport system permease protein glnP [Streptococcus pyogenes MGAS10750] gi|306827161|ref|ZP_07460451.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pyogenes ATCC 10782] gi|94548073|gb|ABF38119.1| Glutamine-binding protein / Glutamine transport system permease protein glnP [Streptococcus pyogenes MGAS10750] gi|304430617|gb|EFM33636.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pyogenes ATCC 10782] Length = 724 Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 57/168 (33%), Positives = 98/168 (58%), Gaps = 7/168 (4%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYI 106 + LI +V + RG PL++ IF+G+P++ + F+A I+L+LN AYI Sbjct: 553 LRLISTAFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGGAYI 612 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EI+R I ++P GQ +AS ++GL+ T+R +ILPQ + ++F+ LK T++ Sbjct: 613 AEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLKDTTIV 672 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S I + E+FQT + I++ YQ +Y LA +YLI+ + + ++E Sbjct: 673 SAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLE 720 >gi|21910533|ref|NP_664801.1| putative glutamine ABC transporter glutamine-binding protein/permease protein [Streptococcus pyogenes MGAS315] gi|28895773|ref|NP_802123.1| hypothetical protein SPs0861 [Streptococcus pyogenes SSI-1] gi|21904733|gb|AAM79604.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pyogenes MGAS315] gi|28811022|dbj|BAC63956.1| hypothetical protein [Streptococcus pyogenes SSI-1] Length = 724 Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 57/168 (33%), Positives = 98/168 (58%), Gaps = 7/168 (4%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYI 106 + LI +V + RG PL++ IF+G+P++ + F+A I+L+LN AYI Sbjct: 553 LRLISTAFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGGAYI 612 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EI+R I ++P GQ +AS ++GL+ T+R +ILPQ + ++F+ LK T++ Sbjct: 613 AEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLKDTTIV 672 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S I + E+FQT + I++ YQ +Y LA +YLI+ + + ++E Sbjct: 673 SAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLE 720 >gi|322411895|gb|EFY02803.1| Amino acid ABC transporter, permease protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 213 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 64/167 (38%), Positives = 102/167 (61%), Gaps = 4/167 (2%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL A+V TL + I ++S+ +G +A +++I F LI+ YVW+ RGTPLL+ Sbjct: 9 PSLLDGALV-TLQVFFIVIILSIPLGAILAFLMKIPFKPLQWFLIL--YVWMMRGTPLLL 65 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QL +Y LP GI FD A I++ TLN++AY +EI R I +IPKGQ++A+ + L Sbjct: 66 QLIFFYYVLPSFGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKP 125 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 QTIR+IILPQ + +E I+++K +S+ + + ++ ++ Sbjct: 126 LQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASK 172 >gi|163857805|ref|YP_001632103.1| amino acid ABC transporter, permease protein [Bordetella petrii DSM 12804] gi|163261533|emb|CAP43835.1| amino acid ABC transporter, permease protein [Bordetella petrii] Length = 229 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 123/212 (58%), Gaps = 11/212 (5%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +E+++ + P LL + TL I+ ++ +GF I V+R + ++ ++ Sbjct: 1 MLHEYWSTAVTVMPFLL-KGFLETLKISFVAIAAGSALGFLIGVLR-SYRIRVVHQLLGL 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISI 117 Y+ + RGTP LVQL+V ++ LP G+ + DS A +SL++ S+Y++EI+ ++I+++ Sbjct: 59 YIHMLRGTPFLVQLYVFYFVLPSSGVAWLEWDSDTAAFVSLSVYTSSYVAEIVMNAILAV 118 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P+GQ + + +GL Q +R +ILPQ + P+S ++ ++KST++ S + I E+ + Sbjct: 119 PRGQVEGALTLGLRPLQALRLVILPQAMRLIVQPMSGVYVMLIKSTAIVSVVGITELTRQ 178 Query: 178 AQRIVSTTY--QPLIIYCELAFVYLILTSFCY 207 + + TY + L IY +A +Y + +CY Sbjct: 179 GE-VFMITYPSKSLFIYALIALIYFL---YCY 206 >gi|293606724|ref|ZP_06689077.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292814874|gb|EFF74002.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 229 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 65/189 (34%), Positives = 111/189 (58%), Gaps = 8/189 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL I+ ++ + ++GF I VIR + I L + Y+ I RGTP LVQL++ ++ LP Sbjct: 22 VTLKISFVAIIAGSLLGFVIGVIRSYHIRGIHQL-LGLYIHILRGTPFLVQLYIFYFVLP 80 Query: 83 HIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GI +DS A +SL++ S Y+SEI+ +I S+P+GQ + + +GL Q +R + Sbjct: 81 STGIELLHWDSGTAAFVSLSVYTSCYVSEIVMGAIQSVPRGQTEGAMTLGLRPLQILRLV 140 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR-IVSTTYQPLIIYCELAFV 198 +LPQ + P+S ++ ++KST++ S + I E+ + + I++ + L IY +A + Sbjct: 141 VLPQAMRLIVQPMSGVYVMLIKSTAILSVVGITELTRQGEVFIITFPAKSLFIYGMIAAI 200 Query: 199 YLILTSFCY 207 Y I +CY Sbjct: 201 YFI---YCY 206 >gi|227522632|ref|ZP_03952681.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] gi|227090212|gb|EEI25524.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] Length = 204 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 124/211 (58%), Gaps = 15/211 (7%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 S P++L A ++L + ISF+ +LI+G F+ + ++ ++ ++ RG P+L Sbjct: 5 SIPKIL-AGFPMSLYLTAISFIGALILGLFLTLAQMS-RFKLLHWSARAFISFMRGVPML 62 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 V LF+I++G ++ A +I+ T+N SA++SE+ RSS ++ +GQW+A+Y++GL Sbjct: 63 VLLFIIYFGFGA-----NALPAAVIAFTINCSAFVSEVFRSSFSAVDRGQWEAAYSLGLP 117 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI- 190 + I +I PQ + L + + + KSTS+A+ IT+ E+F A +I++ YQ + Sbjct: 118 YRTVIAKVIFPQAFRIAIPALGNILLDLFKSTSLAAMITVSEMFMDA-KIIAGAYQDYMS 176 Query: 191 IYCELAFVYLILTSFCYII---QIKIESSVT 218 IY +A +Y FC+++ Q ++E ++T Sbjct: 177 IYIVMAIIYWF---FCWLMTVGQTQLEHALT 204 >gi|331702183|ref|YP_004399142.1| polar amino acid ABC transporter inner membrane subunit [Lactobacillus buchneri NRRL B-30929] gi|329129526|gb|AEB74079.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus buchneri NRRL B-30929] Length = 234 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 117/206 (56%), Gaps = 11/206 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W N+ + L VT+ ++ S ++S I G + +IR + +S I+ F + Sbjct: 8 YSWINI------RFLLEGAWVTILVSVCSIILSYIFGVILGIIR-YVEIKYLSAIVGFVI 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PL++ +F ++GLP+IG D A +I++ + SA ++EI+R+ I+SIP GQ Sbjct: 61 DIIRNLPLILIIFFTYFGLPNIGFKPDPIWASVIAMAVFESAMVAEIVRAGIVSIPVGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + G++ Q +R+IILPQ I + S+FIS++K TS+A+ I +P++ AQ I Sbjct: 121 EGARSTGMSYWQALRYIILPQAIKNMIPAIVSQFISLVKDTSLATIIVLPDLMNHAQIIY 180 Query: 183 S-TTYQPLIIYCELAFVYLILTSFCY 207 T + ++ LA +Y I+ CY Sbjct: 181 GQNTNYTIPMFLALAVMYFIV---CY 203 >gi|257878297|ref|ZP_05657950.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257889502|ref|ZP_05669155.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|257892557|ref|ZP_05672210.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] gi|260559848|ref|ZP_05832027.1| amino acid ABC transporter [Enterococcus faecium C68] gi|293559677|ref|ZP_06676205.1| L-cystine transport system permease protein TcyB [Enterococcus faecium E1162] gi|293569921|ref|ZP_06681008.1| L-cystine transport system permease protein TcyB [Enterococcus faecium E1071] gi|294615206|ref|ZP_06695087.1| L-cystine transport system permease protein TcyB [Enterococcus faecium E1636] gi|294620020|ref|ZP_06699385.1| L-cystine transport system permease protein TcyB [Enterococcus faecium E1679] gi|257812525|gb|EEV41283.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257825862|gb|EEV52488.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|257828936|gb|EEV55543.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] gi|260074072|gb|EEW62395.1| amino acid ABC transporter [Enterococcus faecium C68] gi|291587669|gb|EFF19546.1| L-cystine transport system permease protein TcyB [Enterococcus faecium E1071] gi|291591930|gb|EFF23558.1| L-cystine transport system permease protein TcyB [Enterococcus faecium E1636] gi|291593742|gb|EFF25251.1| L-cystine transport system permease protein TcyB [Enterococcus faecium E1679] gi|291606352|gb|EFF35758.1| L-cystine transport system permease protein TcyB [Enterococcus faecium E1162] Length = 220 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 90/149 (60%), Gaps = 3/149 (2%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +++ + FY+ FRG P LV LF++++GLP+ + A +I T+ SA+I EI R S Sbjct: 55 LNVFIRFYLSFFRGIPALVLLFLLYFGLPY---QLSALTASVICFTITSSAFIGEIYRGS 111 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + + GQWDA A G + +++I+LPQ S LS+ + ++K TS+A+TIT+PE Sbjct: 112 LAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAMDLVKGTSLAATITVPE 171 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 IFQ A+ I T+ +Y +A +Y ++ Sbjct: 172 IFQKAKIIGGRTFDYFSLYILVALIYWVI 200 >gi|119383897|ref|YP_914953.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119373664|gb|ABL69257.1| amino acid ABC transporter membrane protein 2, PAAT family [Paracoccus denitrificans PD1222] Length = 240 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 61/199 (30%), Positives = 114/199 (57%), Gaps = 2/199 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I+D++ QL + + +TL +A +S ++ +A++ + + ++ + W F Sbjct: 5 FSVILDNW-QLFASGLWMTLVVALLSIAAGFLLAIPVAIMALSHRRWLRTIAGAYVEW-F 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R P +V L++ FYGLP +G+ V I+L S Y SE+IR +++++PKGQ +A+ Sbjct: 63 RNIPFIVVLYIFFYGLPFMGLRLPEPVVGGIALAFYASTYFSEVIRGAVLAVPKGQLEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G++ +R ++ PQT+ P ++ IS++K TSV STIT+ EI + T Sbjct: 123 RAVGMSYFMGMREVVAPQTLRLLLPPSTNTAISMIKETSVLSTITVAEITYQGLVVQGAT 182 Query: 186 YQPLIIYCELAFVYLILTS 204 + P ++ A +Y ++TS Sbjct: 183 FAPFEVFLTTAALYWLITS 201 >gi|257880921|ref|ZP_05660574.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|294620773|ref|ZP_06699979.1| L-cystine transport system permease protein TcyB [Enterococcus faecium U0317] gi|257816579|gb|EEV43907.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|291599630|gb|EFF30641.1| L-cystine transport system permease protein TcyB [Enterococcus faecium U0317] Length = 220 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 90/149 (60%), Gaps = 3/149 (2%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +++ + FY+ FRG P LV LF++++GLP+ + A +I T+ SA+I EI R S Sbjct: 55 LNVFIRFYLSFFRGIPALVLLFLLYFGLPY---QLSALTASVICFTITSSAFIGEIYRGS 111 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + + GQWDA A G + +++I+LPQ S LS+ + ++K TS+A+TIT+PE Sbjct: 112 LAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAMDLVKGTSLAATITVPE 171 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 IFQ A+ I T+ +Y +A +Y ++ Sbjct: 172 IFQKAKIIGGRTFDYFSLYILVALIYWVI 200 >gi|90577484|ref|ZP_01233295.1| putative amino acid ABC transporter, permease protein [Vibrio angustum S14] gi|90440570|gb|EAS65750.1| putative amino acid ABC transporter, permease protein [Vibrio angustum S14] Length = 272 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 135/219 (61%), Gaps = 19/219 (8%) Query: 4 EWFNL-IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS-LIMHFY 61 EWF+ +ID +++T+ I+ IS + ++I G A++R+ S +I+ + Y Sbjct: 63 EWFSAELID--------GLLITIKISAISLIFTIIFGLVTALLRL--SHSIVGRALARGY 112 Query: 62 VWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + + R TPLLVQ++++++ P +G+ + F +++L+L AY +EI RS +++IPKG Sbjct: 113 IEVIRNTPLLVQIYLLYFVFGPVLGL--ERFTTAVLALSLFQGAYTAEIFRSGLMNIPKG 170 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ ++GL++ + R+IILPQ + L++E +S++K++S+ S + I ++ + Sbjct: 171 QFEAAESLGLSKVDSYRYIILPQMLRRILPALTNEAVSLVKNSSIVSIMAIFDLTTQGRD 230 Query: 181 IVSTTYQPLIIYCELAFVY----LILTSFCYIIQIKIES 215 IV+ T P I+ +A +Y L+L++F +++ K+ + Sbjct: 231 IVADTAMPFEIWFTIAAMYLCITLLLSAFATLLEHKLAT 269 >gi|16079987|ref|NP_390813.1| sulfur-containing amino acid ABC transporter permease [Bacillus subtilis subsp. subtilis str. 168] gi|221310879|ref|ZP_03592726.1| hypothetical protein Bsubs1_16021 [Bacillus subtilis subsp. subtilis str. 168] gi|221315204|ref|ZP_03597009.1| hypothetical protein BsubsN3_15917 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320122|ref|ZP_03601416.1| hypothetical protein BsubsJ_15833 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324404|ref|ZP_03605698.1| hypothetical protein BsubsS_15992 [Bacillus subtilis subsp. subtilis str. SMY] gi|7674451|sp|O34931|TCYM_BACSU RecName: Full=L-cystine transport system permease protein tcyM gi|2293250|gb|AAC00328.1| transporter [Bacillus subtilis] gi|2635400|emb|CAB14895.1| sulfur-containing amino acid ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] Length = 235 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 112/200 (56%), Gaps = 18/200 (9%) Query: 21 IVVTLPIACISFVISLIIGFFIA----VIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +V T+P+ + V+ ++ GF +A ++RIF +++ FYV FR TP ++ + + Sbjct: 15 MVKTIPLTLMMAVLPIVFGFLVALGNIIVRIFRIKGLVAC-SRFYVSFFRSTPAILHIML 73 Query: 77 IFYGLPHIGIVFDSF-------------VAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I+ G+P + SF + +I++L+L AY++EIIRS I+++ GQ + Sbjct: 74 IYLGIPPVADQVSSFFHLGWSANEIPVSMFVIMALSLTAGAYLTEIIRSGILAMDTGQVE 133 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IGLT QT R +ILPQ + S ++ I L +TS+A+ + +PEI TA + S Sbjct: 134 AAYSIGLTYSQTFRRVILPQALKVSIPNFTNLGIGFLHTTSIAAIVAVPEITGTATIVAS 193 Query: 184 TTYQPLIIYCELAFVYLILT 203 Y L + A +Y +LT Sbjct: 194 DNYAFLEAFIGAAIIYWVLT 213 >gi|317489459|ref|ZP_07947969.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp. 1_3_56FAA] gi|316911388|gb|EFV32987.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp. 1_3_56FAA] Length = 458 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 119/197 (60%), Gaps = 3/197 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++I+ S P ++++ ++ + + +SF +++ IG + +R+ S + + Y+ I R Sbjct: 206 SIIVTSVP-VVFSGWLIAIALVIVSFPLAIPIGLLWSFMRMAKS-RVPRALGATYINIVR 263 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPL +Q+++ F+GLP +GI D FV I L LN SAY++EI R+ I SI GQ++A+ Sbjct: 264 GTPLFLQIYIAFFGLPLLGIKMDLFVLGAIVLVLNSSAYLAEIFRAGIQSINGGQFEAAR 323 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G+ QT+ ++I+PQT+ ++SEFI + K TS+ + + + EI A+ I + T Sbjct: 324 SLGMNGAQTMFYVIIPQTVRRVIPTMTSEFILMYKDTSLLAAVGVMEIMMYAKTITAATG 383 Query: 187 QPLIIYCELAFVYLILT 203 + Y A YLI+T Sbjct: 384 N-VTPYIVAAGFYLIVT 399 >gi|291485151|dbj|BAI86226.1| glutamine ABC transporter, integral membrane protein [Bacillus subtilis subsp. natto BEST195] Length = 216 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 113/204 (55%), Gaps = 15/204 (7%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI---ISLIMH 59 ++ F + +D F L A++ I+ S ++G +AV+RI T+ + + Sbjct: 7 FDNFGMYMDGFYHTLLASV--------IALAGSFVLGVTVAVMRI----TVFKPLQWLGT 54 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV R PLL+ FV ++GLP+ G+ D F A ++LT+ SA+I+E IR+ I S+ K Sbjct: 55 VYVEFIRNIPLLLITFVFYFGLPNAGLRLDGFQAGTVALTIYTSAFIAEAIRAGIQSVSK 114 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ + G T Q + HIILPQ I PL ++F++++K++S+ + ++ A Sbjct: 115 GQMEAARSSGFTYSQAMLHIILPQAIKIVMPPLGNQFLNLVKNSSILGVVAGLDLMYQAD 174 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 + S+T +Y +A YL+LT Sbjct: 175 LVSSSTLVVFDVYIFVALFYLVLT 198 >gi|121609114|ref|YP_996921.1| amino acid ABC transporter permease [Verminephrobacter eiseniae EF01-2] gi|121553754|gb|ABM57903.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Verminephrobacter eiseniae EF01-2] Length = 220 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 60/176 (34%), Positives = 105/176 (59%), Gaps = 4/176 (2%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLL 71 P+LL A+ V T+ I F I+L++G +A++R S+T I+ F++ R TPLL Sbjct: 15 LPELLRAS-VHTIGITLAGFAIALVLGLMLAIMR--RSETRFIAKPTAFFIEFIRSTPLL 71 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +Q++++FY P GI + A + + ++++ Y+SE+ R+ + + +GQW+A+ A+ L+ Sbjct: 72 IQVYMLFYVAPLYGITMSALTAGTLGIAVHYACYVSEVYRAGLNGVARGQWEAACALSLS 131 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +T IILPQ I L + F+++ K T V S IT+ E+ Q A+ I S T++ Sbjct: 132 PWRTYSGIILPQAIRPILPALGNYFVAMFKDTPVLSAITVVELMQQAKNIGSETFR 187 >gi|257125146|ref|YP_003163260.1| polar amino acid ABC transporter inner membrane protein [Leptotrichia buccalis C-1013-b] gi|257049085|gb|ACV38269.1| polar amino acid ABC transporter, inner membrane subunit [Leptotrichia buccalis C-1013-b] Length = 219 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 60/182 (32%), Positives = 110/182 (60%), Gaps = 2/182 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN II++ P+ L A+ +T+ I + + S++IG A+I +++ +I ++ Y+ + Sbjct: 3 FNFIIENIPKYL-EAMKLTVSIGIMGIIFSILIGIICALI-LYYKVPVIKQVVEIYIELS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPL++QLF +++GLP IGI F+S++ ++ L+ +Y+ E RS + S+ KGQ ++ Sbjct: 61 RNTPLVIQLFFLYFGLPKIGITFNSYICAVLGLSFLGGSYMCEAFRSGLESVTKGQRESG 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IGLT Q I ++ILPQ T S +++ I +LK TSV + + E+ + ++ Sbjct: 121 LSIGLTESQLITNVILPQAFTVSFPAIAANIIFLLKETSVIGILALMELMYLTRDLIGLY 180 Query: 186 YQ 187 Y+ Sbjct: 181 YK 182 >gi|78062809|ref|YP_372717.1| glutamine ABC transporter permease protein [Burkholderia sp. 383] gi|77970694|gb|ABB12073.1| L-glutamine ABC transporter membrane protein [Burkholderia sp. 383] Length = 218 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 116/207 (56%), Gaps = 8/207 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++W + I + P L+ + +T+ IA V I+G + R + ++++ Sbjct: 1 MNFDW-SAIWAALPDLM-DGVRLTVFIAFFGLVGGFIVGMIAGMFRAY-GPKAMNVLAQV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 Y+ + RGTP++VQ+ +++ LP HI I D A II++T+N AY++E++R +++SI Sbjct: 58 YIELIRGTPIVVQVMFLYFALPLLAHIRI--DGLTAAIIAITVNSGAYLAEVVRGALLSI 115 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKG +A A+GL+ + + ++ P PL ++ I LK TS+ I + E+ + Sbjct: 116 PKGLTEAGLAMGLSMPRVLLKVVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRK 175 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTS 204 Q I++ +Q + I+ +A +YL+LT Sbjct: 176 GQEIIAGNFQAVEIWTAVAVIYLLLTG 202 >gi|291459981|ref|ZP_06599371.1| L-cystine ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291417322|gb|EFE91041.1| L-cystine ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 223 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 13/223 (5%) Query: 4 EWFN--LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 + FN L + FP++L + T +A S SL+ +A+IR + + +L Y Sbjct: 2 DQFNAKLFFELFPKIL-KFLPATFSLALTSAFFSLVFAILLAIIRQYRIRGLYAL-SSLY 59 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDS------FVAIIISLTLNFSAYISEIIRSSII 115 V FRGTP + QLF +YGL I FD+ F A++I ++ N++A++SE IR+++ Sbjct: 60 VSFFRGTPFVAQLFWFYYGLTQI---FDAIKVMSPFTALVICMSANYAAFMSEDIRAALN 116 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ K Q++A +IG+ QT++ IILPQ +A LS+ FI I KSTS+ I ++ Sbjct: 117 SVSKAQYEAGLSIGMHPLQTVQRIILPQAARVAAPGLSNHFIGIFKSTSIGFMIGYKDMM 176 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 S Y+ L Y VY ++ S Q K+E + Sbjct: 177 AAVGLETSKAYRFLEGYTVSIIVYWVILSILSFGQKKLEEKLN 219 >gi|225378641|ref|ZP_03755862.1| hypothetical protein ROSEINA2194_04309 [Roseburia inulinivorans DSM 16841] gi|225209478|gb|EEG91832.1| hypothetical protein ROSEINA2194_04309 [Roseburia inulinivorans DSM 16841] Length = 247 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 120/211 (56%), Gaps = 15/211 (7%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++ P++L + TL +A S +I+LIIG +A+I+ + ++ I Y+ + Sbjct: 7 FEAVLSQLPEIL-KYLPTTLILAVSSMIIALIIGMLLALIKTK-NIPLLKQIAGVYISLI 64 Query: 66 RGTPLLVQLFVIFYGLPHI--------GIVFDS-----FVAIIISLTLNFSAYISEIIRS 112 RGTP++VQL++ ++G+P I G + S FV II+L++N SAYI+EI R Sbjct: 65 RGTPVIVQLYIAYFGIPMITKYIYQQNGWNYQSSTTSGFVYAIIALSINESAYIAEIFRG 124 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 ++ S+ GQ +A+ AIG+T QT II P+ ++ + L + FI ++K TS+A + Sbjct: 125 ALASVNVGQIEAASAIGMTYFQTFCRIIFPEMLSVALPGLGNSFIGLIKGTSLAFVCAVV 184 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+ + I TY+ +Y LA +Y ++T Sbjct: 185 EMTAQGKIIGGRTYRYFEVYVSLAIIYWVIT 215 >gi|293570941|ref|ZP_06681986.1| L-cystine transport system permease protein TcyB [Enterococcus faecium E980] gi|291609004|gb|EFF38281.1| L-cystine transport system permease protein TcyB [Enterococcus faecium E980] Length = 219 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 90/149 (60%), Gaps = 3/149 (2%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +++ + FY+ FRG P LV LF++++GLP+ + A +I T+ SA+I EI R S Sbjct: 54 LNVFIRFYLSFFRGIPALVLLFLLYFGLPY---QLSALTASVICFTITSSAFIGEIYRGS 110 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + + GQWDA A G + +++I+LPQ S LS+ + ++K TS+A+TIT+PE Sbjct: 111 LAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAMDLVKGTSLAATITVPE 170 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 IFQ A+ I T+ +Y +A +Y ++ Sbjct: 171 IFQKAKIIGGRTFDYFSLYILVALIYWVI 199 >gi|89514203|gb|ABD74962.1| ABC transporter [Sinorhizobium kostiense] Length = 176 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 55/137 (40%), Positives = 82/137 (59%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 R TPL++Q+F ++Y P G+ +VA +I++ L+++AY+SE+ R I S+PKGQW+A Sbjct: 28 LRSTPLVLQIFFVYYVGPEYGVSLSPWVAGMIAIGLHYAAYLSEVYRGGIESVPKGQWEA 87 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 AI LT QT R IILPQ + S + + ISI K T + S I + E+ Q A I Sbjct: 88 CTAINLTTAQTYRRIILPQALPLSVAGMGNYPISIFKDTPMLSVIGVAELMQAATAIGGQ 147 Query: 185 TYQPLIIYCELAFVYLI 201 Y+ L Y + V+L+ Sbjct: 148 NYRYLEPYTIVGVVFLV 164 >gi|77459078|ref|YP_348584.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77383081|gb|ABA74594.1| amino acid ABC transporter membrane protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 292 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 101/171 (59%), Gaps = 14/171 (8%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG--- 80 T+ +A ++ + ++ G A++R+ ++ I+ + Y W+FRGTPL++QL + F Sbjct: 79 TIIMAVLAMALGIVFGVITAIMRMS-ANPILRYVAVTYTWLFRGTPLILQLLLWFNLALI 137 Query: 81 LPHIGI----------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P IGI + FVA ++ L++N AY +E++R+ ++S+ GQ++A+ +IG+ Sbjct: 138 FPTIGIPGLFELDTVSLMTPFVAALLGLSINQGAYTAEVVRAGLLSVDTGQYEAAKSIGM 197 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 R Q +R IILPQ + P+ +EFI ++K TS+AS I E+ AQ I Sbjct: 198 PRLQALRRIILPQAMRIIIPPVGNEFIGMVKMTSLASVIQYSELLYNAQNI 248 >gi|51243940|ref|YP_063824.1| glutamine transport system permease protein (GlnP) [Desulfotalea psychrophila LSv54] gi|50874977|emb|CAG34817.1| related to glutamine transport system permease protein (GlnP) [Desulfotalea psychrophila LSv54] Length = 269 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 113/188 (60%), Gaps = 4/188 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + +TL I+ IS V + IG A++R+ S L + FY+ I R TPLL+Q+F Sbjct: 68 LLKGLKITLQISGISLVCAFFIGLTTALLRLSSSRVGHGLAV-FYLEISRNTPLLIQIFF 126 Query: 77 IFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I++ P +G+ + F + I++L+L AY SEI R+ I+SI +GQ +A+ + GL+ Q Sbjct: 127 IYFVFGPILGL--ERFSSAILALSLFEGAYTSEIFRTGILSIDRGQHEAAASFGLSNIQR 184 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 R IILPQ I PL+++ IS++K +++ STI I ++ AQ +V+ TY I+ + Sbjct: 185 YRFIILPQAIKKILPPLTNQAISLVKDSALVSTIAIYDLTMQAQMLVAETYLSFEIWFTV 244 Query: 196 AFVYLILT 203 A +YL + Sbjct: 245 ALIYLCIN 252 >gi|314938648|ref|ZP_07845928.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|314944092|ref|ZP_07850755.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|314950330|ref|ZP_07853611.1| ABC transporter, permease protein [Enterococcus faecium TX0082] gi|314951102|ref|ZP_07854164.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|314992312|ref|ZP_07857746.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|314996123|ref|ZP_07861194.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|313589680|gb|EFR68525.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|313593128|gb|EFR71973.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|313596736|gb|EFR75581.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|313597319|gb|EFR76164.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|313642036|gb|EFS06616.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|313643347|gb|EFS07927.1| ABC transporter, permease protein [Enterococcus faecium TX0082] Length = 219 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 90/149 (60%), Gaps = 3/149 (2%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +++ + FY+ FRG P LV LF++++GLP+ + A +I T+ SA+I EI R S Sbjct: 54 LNVFIRFYLSFFRGIPALVLLFLLYFGLPY---QLSALTASVICFTITSSAFIGEIYRGS 110 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + + GQWDA A G + +++I+LPQ S LS+ + ++K TS+A+TIT+PE Sbjct: 111 LAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAMDLVKGTSLAATITVPE 170 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 IFQ A+ I T+ +Y +A +Y ++ Sbjct: 171 IFQKAKIIGGRTFDYFSLYILVALIYWVI 199 >gi|50119798|ref|YP_048965.1| ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49610324|emb|CAG73768.1| ABC transporter permease protein [Pectobacterium atrosepticum SCRI1043] Length = 313 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 75/246 (30%), Positives = 130/246 (52%), Gaps = 25/246 (10%) Query: 2 KYEWFNLIIDSFPQ-LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++EW +++DSF + + +++TL + +S V+ G +A++R+ S+ ++ + Sbjct: 43 RFEW-RVVVDSFTEDSILQGVIMTLKLTAMSVVLGFGGGTILALMRLS-SNPVLVAVSCG 100 Query: 61 YVWIFRGTPLLVQLFV----------IFYGLPHIGIVFD--------SFVAIIISLTLNF 102 Y W FRG P LVQLF+ I LP G VF F A +++L ++ Sbjct: 101 YTWFFRGVPTLVQLFLWYNIAALYPTISLSLPFFGEVFSVPGNTLISPFNAAVLALVMHQ 160 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 SAY +EI+R+ I S+ GQ +A+ A+G + Q + ++PQ + P +E I LK+ Sbjct: 161 SAYAAEIVRAGIQSVNPGQLEAARALGYRKPQIFFYTVMPQAMRAILPPAGNEVIGQLKT 220 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T+V S I++ ++ +AQ I TY+ PL++ + YL+LTS + Q IE + Sbjct: 221 TAVVSVISLQDVLYSAQIIYQRTYEVIPLLLVATI--WYLLLTSVLSVGQYYIERYFGRS 278 Query: 221 TYSVDK 226 T +K Sbjct: 279 TLKRNK 284 >gi|332977917|gb|EGK14664.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Desmospora sp. 8437] Length = 218 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 64/166 (38%), Positives = 97/166 (58%), Gaps = 1/166 (0%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS 97 IG IAVIR+ ++ I YV FR TPL++Q+F GLP IGI F A I Sbjct: 36 IGTVIAVIRLS-RVRLLEWIGTVYVEFFRNTPLVIQVFFFAMGLPSIGIDISEFTAGAIG 94 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 L++ A+I+E IR I S+P GQ +AS + G+T Q +R +ILPQ PL ++FI Sbjct: 95 LSIYTGAFIAEAIRGGIQSVPSGQMEASRSSGMTYVQAMRFVILPQAFKLVIPPLGNQFI 154 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +++K++SV + I ++ A + S T+Q + Y +A +YL++T Sbjct: 155 NLVKNSSVLAIIAGGDLMYAADIVSSQTFQINLTYIFVALLYLVIT 200 >gi|293552748|ref|ZP_06673409.1| L-cystine transport system permease protein TcyB [Enterococcus faecium E1039] gi|291603057|gb|EFF33248.1| L-cystine transport system permease protein TcyB [Enterococcus faecium E1039] Length = 179 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 90/149 (60%), Gaps = 3/149 (2%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +++ + FY+ FRG P LV LF++++GLP+ + A +I T+ SA+I EI R S Sbjct: 14 LNVFIRFYLSFFRGIPALVLLFLLYFGLPY---QLSALTASVICFTITSSAFIGEIYRGS 70 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + + GQWDA A G + +++I+LPQ S LS+ + ++K TS+A+TIT+PE Sbjct: 71 LAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAMDLVKGTSLAATITVPE 130 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 IFQ A+ I T+ +Y +A +Y ++ Sbjct: 131 IFQKAKIIGGRTFDYFSLYILVALIYWVI 159 >gi|258654440|ref|YP_003203596.1| polar amino acid ABC transporter inner membrane subunit [Nakamurella multipartita DSM 44233] gi|258557665|gb|ACV80607.1| polar amino acid ABC transporter, inner membrane subunit [Nakamurella multipartita DSM 44233] Length = 307 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 74/231 (32%), Positives = 128/231 (55%), Gaps = 20/231 (8%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 PQ+L + +T+ + + VI +++G +AV+R+ + I++ + Y+W FRGTP+LVQ Sbjct: 64 PQVLRG-LWLTVWVTVAAMVIGIVLGVILAVMRL-SPNPIVNGVAWIYIWFFRGTPVLVQ 121 Query: 74 -LFVIFYGLPH----IGIVFDS-------------FVAIIISLTLNFSAYISEIIRSSII 115 +F +F G + +GI F V +++L LN +AY++EI+R+ I Sbjct: 122 IIFWVFLGQLYKYISLGIPFGPQFLYFNTTELIPVLVGGLLALGLNEAAYMAEIVRAGIS 181 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ GQ +A+ A+G+TR + +R I+LPQ + P +E IS+LK+TS+ S I E+F Sbjct: 182 SVDSGQTEAAEALGMTRLKVMRRIVLPQAMRIIVPPTGNETISMLKTTSLLSVAAILELF 241 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 T Q I + Y+ + + + YL+ TS + Q +E + T V + Sbjct: 242 GTVQLIYGSNYKQIPLLVVASIWYLVFTSVMSVGQYFLEKRFGRGTSPVGR 292 >gi|27382024|ref|NP_773553.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27355194|dbj|BAC52178.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 213 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 56/173 (32%), Positives = 101/173 (58%), Gaps = 3/173 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + TL ++ I FV+ I G +A+ R + + Y+ +F+GTPLL+QLFV Sbjct: 9 LLGGLKWTLALSAIGFVVGSIAGLGVALARTS-GHRALERVAAGYIALFQGTPLLMQLFV 67 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++YGL G+ D++V++ I TL+ A++ EI R +I ++PKGQ +A+ A+ L + Sbjct: 68 VYYGLALAGLKLDAWVSVSIGFTLHSGAFLGEIWRGAIEAVPKGQVEAAKALSLNYGSQM 127 Query: 137 RHIILPQTITTSAVPLSSEF-ISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 + ++LPQ I S +P + F + ++K TS+A+ I E+ + + + ++P Sbjct: 128 QDVVLPQAIRIS-LPATIGFLVQLIKGTSLAAIIGFTELMRAGTIVSNQNFKP 179 >gi|319783614|ref|YP_004143090.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169502|gb|ADV13040.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 239 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 112/204 (54%), Gaps = 17/204 (8%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 Y A++ T+ +A + I L IGFFIA+ + + + L + Y +FRG P LV LF+ Sbjct: 23 YGALI-TIALALATLPIGLTIGFFIALAKQS-EEPSLRLAANIYTTVFRGLPELVTLFLF 80 Query: 78 FYGLP------------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 F+G+P + I +SFVA +I L L FS+Y SE+ S+ +IPKGQ++ Sbjct: 81 FFGMPILLQHLVRYFRPDVTIDVNSFVAGMIVLALIFSSYASEVFLSAFRAIPKGQYEGG 140 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 YAIGL+ T+R +I+PQ + + L + ++S+LK TS+ S + + E + A T Sbjct: 141 YAIGLSNWLTMRKVIVPQLLRIAFPGLENCWLSLLKDTSLVSVVGLAETLRNASIAARVT 200 Query: 186 YQPLIIYCELAFVYL---ILTSFC 206 + + + V+L +L+SF Sbjct: 201 KHAFLFFGVASLVFLGLAVLSSFA 224 >gi|89094512|ref|ZP_01167451.1| ABC basic amino acid transporter, inner membrane subunit [Oceanospirillum sp. MED92] gi|89081248|gb|EAR60481.1| ABC basic amino acid transporter, inner membrane subunit [Oceanospirillum sp. MED92] Length = 230 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 109/207 (52%), Gaps = 13/207 (6%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + F LL + +T+ +A S + L+ G A ++ S I + + + Y RG P Sbjct: 3 LQGFGHLLISGAWITIQLAVCSLFVGLLFGIIGASAKLS-SSKIANTLGNGYTLFVRGMP 61 Query: 70 LLVQLFVIFYG----LPHIGIVFD--------SFVAIIISLTLNFSAYISEIIRSSIISI 117 L+ + I++G L I +F FVA + +L++ F AY +E+ RS+++ I Sbjct: 62 ELLLVLTIYFGSSAVLMAIASLFGYDEYIELSPFVAGVTALSIAFGAYATEVFRSAMMEI 121 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKGQ +A+ A+G+TR QT R I+LPQ + L + F+ +LK T++ S I + E+ + Sbjct: 122 PKGQREAAVALGMTRFQTFRRIVLPQVWRLALPGLGNLFLVLLKDTALVSVIGLNELMRQ 181 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTS 204 V T +P Y A VYL++TS Sbjct: 182 TAVAVGNTKEPFTFYFAAAMVYLLMTS 208 >gi|88855905|ref|ZP_01130567.1| amino acid ABC transporter, permease [marine actinobacterium PHSC20C1] gi|88814772|gb|EAR24632.1| amino acid ABC transporter, permease [marine actinobacterium PHSC20C1] Length = 216 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 56/154 (36%), Positives = 95/154 (61%), Gaps = 1/154 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + RG PL+ LFVI++G+ I + D+F A I L+++ SAY++EI RS I S+ G Sbjct: 57 YLAVVRGVPLIALLFVIYFGIVSI-VKVDAFTAATIGLSVHSSAYVAEIFRSGINSVHSG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++G++R T+ ++ PQ + L ++ I LK ++VAS IT+ E+F +AQR Sbjct: 116 QVEASRSLGMSRAATMIRVVAPQALRVVIPALVNQAIISLKDSAVASFITVDELFMSAQR 175 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + + T+QPL Y ++ YL + + ++E Sbjct: 176 LSAATFQPLTYYAIVSLYYLAVVGVMTYLSGRVE 209 >gi|228987345|ref|ZP_04147465.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772317|gb|EEM20763.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 222 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 120/215 (55%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I +S + I+G +A+ +I + ++ Y IF Sbjct: 8 FSAITPSIPYIL-KGLEVTLKIVAVSALAGFILGTLLALCKIARIRAL-NIAADLYTSIF 65 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P I G +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 66 RGTPLVLQLMIIYFGVPQIIGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 125 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 126 AMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 185 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y +L ++ IE + + Sbjct: 186 TFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKK 220 >gi|224827114|ref|ZP_03700210.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] gi|224600623|gb|EEG06810.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] Length = 243 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 62/217 (28%), Positives = 116/217 (53%), Gaps = 21/217 (9%) Query: 7 NLIIDSFPQLLYAA-----------IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS 55 NL+I++FP L +++TL + S + L + + ++R+ + ++S Sbjct: 5 NLMIENFPSFLGGGSGEAVLSTSDGLILTLELLFYSLLGGLALSIPLGLMRVS-RNRLVS 63 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYI 106 + Y ++FRGTP+LVQLF+I+YGL V +S+ +++ TLN +AY Sbjct: 64 GAVWLYTYVFRGTPMLVQLFIIYYGLSQFEAVRESWAWTYLQEAYFCALLAFTLNTAAYT 123 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EII I + G+ +A+ A+G+++ +R I++P + + S+E + +L+ TS+A Sbjct: 124 TEIIAGQIRNTHWGEIEAAKAMGMSKWLMMRRIVIPAALRRALPAYSNEVVMMLQGTSIA 183 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +T+ ++ A+RI S TY P + +YL T Sbjct: 184 GLVTLADVTGVARRIYSDTYMPFEPFLMAGLIYLAFT 220 >gi|209547542|ref|YP_002279460.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538786|gb|ACI58720.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 219 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 51/148 (34%), Positives = 92/148 (62%) Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 ++ +Y+ +F+GTPLL+QLF+ F+GL GI +++A ++LTL +A+++EI R + Sbjct: 50 KVLAKYYIELFQGTPLLMQLFIAFFGLGLFGIDVPAWLAAGLTLTLWSAAFLAEIWRGCV 109 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 SI + QW+AS ++G+ R Q +R++ILPQ + + P + I+K T++ S I E+ Sbjct: 110 ESIARSQWEASASLGMGRLQQMRYVILPQALRVAIPPTVGFSVQIIKGTALTSIIGFVEL 169 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + + + T+QP +Y +A +Y L Sbjct: 170 SKAGTVVTNATFQPFTVYGLVALIYFAL 197 >gi|228916790|ref|ZP_04080355.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929200|ref|ZP_04092227.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935473|ref|ZP_04098291.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229093213|ref|ZP_04224331.1| Arginine transport system permease protein artQ [Bacillus cereus Rock3-42] gi|229123673|ref|ZP_04252868.1| Arginine transport system permease protein artQ [Bacillus cereus 95/8201] gi|229157734|ref|ZP_04285809.1| Arginine transport system permease protein artQ [Bacillus cereus ATCC 4342] gi|229186397|ref|ZP_04313561.1| Arginine transport system permease protein artQ [Bacillus cereus BGSC 6E1] gi|228597024|gb|EEK54680.1| Arginine transport system permease protein artQ [Bacillus cereus BGSC 6E1] gi|228625691|gb|EEK82443.1| Arginine transport system permease protein artQ [Bacillus cereus ATCC 4342] gi|228659808|gb|EEL15453.1| Arginine transport system permease protein artQ [Bacillus cereus 95/8201] gi|228690187|gb|EEL43981.1| Arginine transport system permease protein artQ [Bacillus cereus Rock3-42] gi|228824225|gb|EEM70039.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830490|gb|EEM76100.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842977|gb|EEM88060.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 222 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 120/215 (55%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I +S + I+G +A+ +I + ++ Y IF Sbjct: 8 FSAITPSIPYIL-KGLEVTLKIVAVSALAGFILGTLLALCKIARIRAL-NIAADLYTSIF 65 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P I G +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 66 RGTPLVLQLMIIYFGVPQIIGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 125 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 126 AMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 185 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y +L ++ IE + + Sbjct: 186 TFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKK 220 >gi|69248090|ref|ZP_00604619.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Enterococcus faecium DO] gi|258616183|ref|ZP_05713953.1| transport system membrane protein [Enterococcus faecium DO] gi|68194564|gb|EAN09056.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Enterococcus faecium DO] Length = 219 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 90/149 (60%), Gaps = 3/149 (2%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +++ + FY+ FRG P LV LF++++GLP+ + A +I T+ SA+I EI R S Sbjct: 54 LNVFIRFYLSFFRGIPALVLLFLLYFGLPY---QLSALTASVICFTITSSAFIGEIYRGS 110 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + + GQWDA A G + +++I+LPQ S LS+ + ++K TS+A+TIT+PE Sbjct: 111 LAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAMDLVKGTSLAATITVPE 170 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 IFQ A+ I T+ +Y +A +Y ++ Sbjct: 171 IFQKAKIIGGRTFDYFSLYILVALIYWVI 199 >gi|89899833|ref|YP_522304.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89344570|gb|ABD68773.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 214 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 114/204 (55%), Gaps = 1/204 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L A + T+ + ++ + I+GF IA+ R+ ++++ + Y+ +G PLLV L Sbjct: 8 QYLGVAALWTVGLTLMALIGGSILGFCIALFRVS-PNSVLRYLSVVYIQTIQGIPLLVLL 66 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F+ ++G G FV ++++ +L +AY+ EI R I ++PK QW+AS ++G R Q Sbjct: 67 FIAYFGFSIAGFNPSPFVTVVVAFSLYSAAYLGEIWRGCIQTVPKPQWEASGSLGFNRYQ 126 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 +R +I+PQ + P + ++K+TS+AST+ E+ + Q + +TT++P ++ Sbjct: 127 QLRLVIIPQAFRIATPPTVGFLVQLVKNTSLASTVGFIELARAGQILNNTTFKPFSVFLL 186 Query: 195 LAFVYLILTSFCYIIQIKIESSVT 218 +A Y L ++ K+E S+ Sbjct: 187 VALFYFGLCFPLSLLSKKLERSLN 210 >gi|302387424|ref|YP_003823246.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium saccharolyticum WM1] gi|302198052|gb|ADL05623.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium saccharolyticum WM1] Length = 230 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 119/215 (55%), Gaps = 16/215 (7%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHFYV 62 N I+D + + + TL I + +I +++GF +A+IR + +T I++ I Y+ Sbjct: 12 NFIVDDRWKYIADGLQNTLKITFFAVLIGILLGFLVAIIRSTYENTHKLKILNAICSVYL 71 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDS-----FVAIIISLTLNFSAYISEIIRSSIISI 117 + RGTP++VQL ++++ ++F S I++ +N AY++EI RS I SI Sbjct: 72 TVIRGTPVVVQLMIMYF------VIFASTNPGQVPTAILAFGINSGAYVAEIFRSGISSI 125 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 +GQ++A ++G QT+ II+PQ L++EFI +LK TSVA I + ++ + Sbjct: 126 ERGQFEAGRSLGFNYAQTMWFIIMPQAFKNVVPTLANEFIVLLKETSVAGYIGLQDLTKG 185 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTS-FCYIIQI 211 I S TY + +A +YL++ F Y++++ Sbjct: 186 GDIIKSRTYSAFMPLIAVAIIYLVMVMVFSYLVKL 220 >gi|256829598|ref|YP_003158326.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] gi|256578774|gb|ACU89910.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] Length = 334 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 121/206 (58%), Gaps = 18/206 (8%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTP 69 ++ P +L +++TL ++ ++ V +++G F + RI SD + Y+ + RG+P Sbjct: 119 ETKPGILIEGLLLTLEVSALAIVFGILLGLFTGLARI--SDNPALRWGAIAYIELIRGSP 176 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVA------------IIISLTLNFSAYISEIIRSSIISI 117 LLVQ+F+ ++ +G V +S ++ +++L + AY +EI+R+ I S+ Sbjct: 177 LLVQIFLWYF---VVGTVINSMLSQYGIGQIPPLWFGVMALAIFTGAYTAEIVRAGIQSV 233 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 +GQ +A+ ++G+T + +R +ILPQ PL+ +FIS++K +S+ I+I E+ + Sbjct: 234 HRGQMEAARSLGMTYNKAMRKVILPQAFRRILPPLAGQFISLVKDSSLLGVISIRELTKA 293 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 ++ +VS++ QP I+ A +YL+LT Sbjct: 294 SREVVSSSLQPFEIWIVCAILYLVLT 319 >gi|190892106|ref|YP_001978648.1| amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190697385|gb|ACE91470.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 268 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 116/202 (57%), Gaps = 17/202 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ +A ++ I L IGF +A+ + + + L Y IFRG P L+ LF+I+Y Sbjct: 52 GLQVTVSVAIVTLPIGLAIGFLVALGQQS-EEKPLRLASGIYTTIFRGLPELLTLFIIYY 110 Query: 80 GL-----------PHIG--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G+ ++G I ++F+A +I+L++ FSAY SE++ S+ +IPKGQ++A Sbjct: 111 GMQMLIQSLLELAGYVGPPIEINAFLAGVIALSVVFSAYCSEVLLSAFRAIPKGQYEAGD 170 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL R +T+R IILPQ + + L++ ++ +LK TS S I++ +I + V T Sbjct: 171 SLGLHRGRTLRLIILPQLVRIALPGLTNLWMVLLKDTSYVSIISLADILRQTSVAVRVTK 230 Query: 187 QPLIIY---CELAFVYLILTSF 205 +P Y C L V IL+SF Sbjct: 231 EPFFFYGIACCLYLVLAILSSF 252 >gi|116695744|ref|YP_841320.1| ABC-type transporter, permease component [Ralstonia eutropha H16] gi|113530243|emb|CAJ96590.1| ABC-type transporter, permease component [Ralstonia eutropha H16] Length = 252 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 90/142 (63%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV R TP L+QLF+IF+GLP +G+ D+ A +I++T+N AY +EIIR+ + ++ + Sbjct: 60 YVEAIRNTPFLIQLFIIFFGLPTVGLQIDAVTAAVIAMTVNLGAYSTEIIRAGLQAVHRS 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+G+TR Q IRH+ L L+S+F ++ ++SV STI++ E+ A + Sbjct: 120 QLEAAAALGMTRWQLIRHVALVPAFEKVYPALTSQFTLMMLTSSVVSTISVEELTAVASQ 179 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 + S T++ Y + FVY+ L Sbjct: 180 VDSQTFRTFESYILVMFVYIGL 201 >gi|313887599|ref|ZP_07821282.1| putative arginine ABC transporter, permease protein ArtQ [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846477|gb|EFR33855.1| putative arginine ABC transporter, permease protein ArtQ [Peptoniphilus harei ACS-146-V-Sch2b] Length = 224 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 115/198 (58%), Gaps = 11/198 (5%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P L AI T+ ++ I ++ +G +A+++I I +++ Y+ I RGTP+LV Sbjct: 14 LPTYLNGAIT-TIELSIIGVILGFTLGVILALMKIS-KLKIFNILSSVYIEIVRGTPMLV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAII-------ISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 Q+ ++++GL I + + F + +S++LN +AYI+EIIRS I S+ GQ +A+ Sbjct: 72 QIMIVYFGLKKI--IPEQFTLLTAPMFLCALSISLNSAAYIAEIIRSGISSVDYGQMEAA 129 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++GL KQ +R II+PQ I L +EFI+++K +S+ T+ + E+ + I S T Sbjct: 130 RSLGLNEKQAMRKIIMPQAIKNILPALVNEFITLIKESSITYTVGVGELMYAGKSISSGT 189 Query: 186 YQPLIIYCELAFVYLILT 203 ++ + + A +Y I+T Sbjct: 190 FELVRPFIFTACIYFIMT 207 >gi|299537491|ref|ZP_07050785.1| polar amino acid ABC transporter, inner membrane subunit [Lysinibacillus fusiformis ZC1] gi|298727052|gb|EFI67633.1| polar amino acid ABC transporter, inner membrane subunit [Lysinibacillus fusiformis ZC1] Length = 231 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 64/174 (36%), Positives = 104/174 (59%), Gaps = 4/174 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIFRGTPLLVQLFVIF 78 A V+T+ + +S I+ +IG A ++ S+ I+ I + Y+++ RG PL+VQL ++ Sbjct: 21 ATVLTIELTIVSLFIACVIGLVFAFFKV--SNIKILESIANAYIFVVRGMPLIVQLMFLY 78 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 YG+ I + D F A I+L ++ AYI+EI R SI SI KGQ +A ++G+T +T+R Sbjct: 79 YGISSIFTLSD-FAAGSIALGIHSGAYIAEIFRGSIQSIDKGQMEAGRSLGMTYFKTMRR 137 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 IILPQ+ + L+++FI LK +S+ + I + E+F A + Y PL Y Sbjct: 138 IILPQSFKRAIPALANQFIIGLKDSSLVAYIAVSELFNHALSTQAYNYMPLETY 191 >gi|150389058|ref|YP_001319107.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus metalliredigens QYMF] gi|149948920|gb|ABR47448.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus metalliredigens QYMF] Length = 227 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 127/218 (58%), Gaps = 6/218 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++ +I +F +++ +I+VT+ + +S V +IG +A IRI+ + L Y+ Sbjct: 8 YDAMIRAF-EVVSKSILVTVNMLVVSLVFGFMIGLTVAFIRIYKVRGLYPLT-SIYLSAI 65 Query: 66 RGTPLLVQLFVIFYGLPHI---GIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 RG PLL+Q+F+ ++G+P I I F F++ I+ ++N AY+SE IR++I+SI KGQ Sbjct: 66 RGVPLLIQIFIFYFGVPQIFPQTIHFLTPFMSACIAFSINSGAYMSETIRAAILSIDKGQ 125 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++G+T + +++I+LPQ + L + I++LK TS+A TI I ++ A+ + Sbjct: 126 KEAALSVGMTEFKAMKNIVLPQAAVVAIPSLGNTIINLLKETSLAFTIGIADLLGRAKML 185 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 ++ Y+ L + +Y +T + K+E ++ Sbjct: 186 SASNYRYLETFVATGLIYWGITILITYVLNKLEKRFSK 223 >gi|325479869|gb|EGC82954.1| ABC transporter, permease protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 491 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 19/213 (8%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD---------TIISLIMHFYVWIFRG 67 L ++VTL ISF + LII + +D ++ I +V I RG Sbjct: 281 LKKTVIVTLAALVISFTLGLIIALVRSAALDMGNDVSGFSGVLIKVLDKIFGIFVTIIRG 340 Query: 68 TPLLVQLFVIFY----GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 TP +QL ++F L +I +V IIS LN SAY++E+ R I S+ KG+ + Sbjct: 341 TPSTIQLLIMFNVILVNLDNIMLV------AIISFALNSSAYMAELFRGGINSVSKGEKE 394 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++GL+ QT+R +++PQ I S L +E I++ K TS+A I + ++ + A ++S Sbjct: 395 AARSLGLSNLQTMRKVVMPQAIKNSLPALGNEIITLFKETSIAGFIGLADLTRGASIVIS 454 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 T+ Y A +YL++ F + K+E Sbjct: 455 QTFDAATAYFSAAIIYLVIVMFMEKLFKKLEKG 487 >gi|171778291|ref|ZP_02919497.1| hypothetical protein STRINF_00339 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282991|gb|EDT48415.1| hypothetical protein STRINF_00339 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 227 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 111/184 (60%), Gaps = 3/184 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W + ++ P L A+V+T+ +A + ++I+GFFI++I+ +++ I+S I Y+ Sbjct: 3 DW-GFVYENIP-LYQQALVLTIRLALFGILGAIILGFFISLIK-YYNVAILSQICQIYIE 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + R TPLL+QL+ ++YGLP +G+V S + I+ L +Y++E RS + ++ K Q++ Sbjct: 60 LSRNTPLLIQLYFLYYGLPKVGVVLPSELCAIVGLIFLGGSYMAESFRSGLEAVSKRQYE 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 +IGL+ Q + ++ILPQ I + L + I ++K TSV S + + ++ A+ ++ Sbjct: 120 VGLSIGLSHLQNVFYVILPQAIAVALPSLVANIIFLVKETSVFSIVALADLMYIAKDLIG 179 Query: 184 TTYQ 187 Y+ Sbjct: 180 LYYE 183 >gi|118479346|ref|YP_896497.1| amino acid ABC transporter permease [Bacillus thuringiensis str. Al Hakam] gi|228947870|ref|ZP_04110157.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|118418571|gb|ABK86990.1| L-arginine ABC transporter membrane protein [Bacillus thuringiensis str. Al Hakam] gi|228811857|gb|EEM58191.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 225 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 120/215 (55%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I +S + I+G +A+ +I + ++ Y IF Sbjct: 11 FSAITPSIPYIL-KGLEVTLKIVAVSALAGFILGTLLALCKIARIRAL-NIAADLYTSIF 68 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P I G +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 69 RGTPLVLQLMIIYFGVPQIIGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 128 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 129 AMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 188 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y +L ++ IE + + Sbjct: 189 TFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKK 223 >gi|167725481|ref|ZP_02408717.1| glutamine ABC transporter permease protein [Burkholderia pseudomallei DM98] gi|217424148|ref|ZP_03455647.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|237508257|ref|ZP_04520972.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|254186972|ref|ZP_04893487.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254263010|ref|ZP_04953875.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 1710a] gi|157934655|gb|EDO90325.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|217392613|gb|EEC32636.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|235000462|gb|EEP49886.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|254214012|gb|EET03397.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 1710a] Length = 235 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 103/177 (58%), Gaps = 10/177 (5%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIV 87 F++ +I G F A + +++++ Y+ + RGTP++VQ+ +++ LP H+ I Sbjct: 50 GFLVGMIAGMFRA-----YGPAVLNVLAQVYIELIRGTPIVVQVMFLYFALPLLAHVRI- 103 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 D A ++++TLN AY++E++R +++SIPKG +A A+GL+ + + I+ P Sbjct: 104 -DGLSAAVVAITLNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLVKIVGPLAFRR 162 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 PL ++ I LK TS+ I + E+ + Q I++ +Q + I+ +A +YL+LT Sbjct: 163 LIAPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAAIYLVLTG 219 >gi|302384917|ref|YP_003820739.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium saccharolyticum WM1] gi|302195545|gb|ADL03116.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium saccharolyticum WM1] Length = 220 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 117/200 (58%), Gaps = 5/200 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ ++ FP++L + + VTL + + V SL+IG IAVI ++ ++ + FY+ + Sbjct: 4 FSYFLEVFPKIL-SKLQVTLSLTFTAAVFSLVIGIVIAVIG-YYRIKVLYPLTRFYLSVL 61 Query: 66 RGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RGTPL+ QL+ +YGL + + + A+ + L+LN A++SE IR ++ S+ GQ Sbjct: 62 RGTPLVAQLYFFYYGLARLSEIVLNMEPMTAVALVLSLNTGAFMSESIRGALFSVEPGQK 121 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ +G+T QTI I+LPQ + L ++ I++LK+TS+A + I ++ A+ Sbjct: 122 EAAAMLGMTELQTILRIVLPQAFRVALPSLFNDLINLLKATSLAFMLGIRDVMGQAKSEG 181 Query: 183 STTYQPLIIYCELAFVYLIL 202 + +++ IY + +Y +L Sbjct: 182 AQSFRYFEIYLAVMLIYWLL 201 >gi|269120727|ref|YP_003308904.1| polar amino acid ABC transporter inner membrane subunit [Sebaldella termitidis ATCC 33386] gi|268614605|gb|ACZ08973.1| polar amino acid ABC transporter, inner membrane subunit [Sebaldella termitidis ATCC 33386] Length = 215 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 67/189 (35%), Positives = 109/189 (57%), Gaps = 7/189 (3%) Query: 21 IVVTLPIACISFVISLIIGFFIAVIRIF---FSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 I+ +LP I + ++ +I + +I + II + FY WIFRGTPL++QLF I Sbjct: 10 ILSSLPNVIIVYTVTALISLPLGIIGALAYTGNSVIIKKSISFYTWIFRGTPLILQLFFI 69 Query: 78 FYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +YGLP + +V D A +I+ +N++AY+ EIIRS + SI KGQ +A+ +G + + Sbjct: 70 YYGLPTLTNNAVVLDRMPAALITFIINYTAYLIEIIRSGLESIDKGQDEAAKVLGYSYFK 129 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 I +I+LPQ I L +E I+++K T++ I++ EI +T + I S Y + Y Sbjct: 130 KIWYILLPQAIRRVLPSLGNEAITLVKDTALIYIISLTEILKTTKEIAS-RYSIITPYFY 188 Query: 195 LAFVYLILT 203 +YL L+ Sbjct: 189 AGLIYLGLS 197 >gi|197335320|ref|YP_002156402.1| octopine transport system permease protein OccM [Vibrio fischeri MJ11] gi|197316810|gb|ACH66257.1| octopine transport system permease protein OccM [Vibrio fischeri MJ11] Length = 225 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 114/204 (55%), Gaps = 9/204 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++II+S P L + T+ + +S VI L I A+ R ++ ++ L Y++ F Sbjct: 3 FSIIIESLPVYL-EGLWTTVWLVSVSLVIGLCIAVPTAIARNS-NNPVLWLPAWAYIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD------SFVAIIISLTLNFSAYISEIIRSSIISIPK 119 RGTPLL+QL++I+YG+ V D SF A++ + TLN AY +EI+R SI +P+ Sbjct: 61 RGTPLLIQLYLIYYGMDQFFPVKDTLWEHASFCALV-AFTLNTGAYTAEIVRGSINGLPQ 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G+ +A+ A G+ + QT + IILP + + S+E I +L +++A +T+ ++ A+ Sbjct: 120 GEVEAAKAYGMNQFQTYKRIILPSALRRALPAYSNEVIFMLHGSAIAGIVTLLDLTGAAR 179 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 + S Y P Y Y+ LT Sbjct: 180 LVNSRYYAPFESYIAAGMFYMCLT 203 >gi|121597593|ref|YP_990724.1| glutamine ABC transporter permease protein [Burkholderia mallei SAVP1] gi|124382114|ref|YP_001025207.1| glutamine ABC transporter permease protein [Burkholderia mallei NCTC 10229] gi|126443854|ref|YP_001064262.1| glutamine ABC transporter permease [Burkholderia pseudomallei 668] gi|126445790|ref|YP_001079561.1| glutamine ABC transporter permease protein [Burkholderia mallei NCTC 10247] gi|126458223|ref|YP_001077186.1| glutamine ABC transporter permease [Burkholderia pseudomallei 1106a] gi|134281792|ref|ZP_01768499.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|166998959|ref|ZP_02264809.1| glutamine ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|167744401|ref|ZP_02417175.1| glutamine ABC transporter permease protein [Burkholderia pseudomallei 14] gi|167821596|ref|ZP_02453276.1| glutamine ABC transporter permease protein [Burkholderia pseudomallei 91] gi|167829940|ref|ZP_02461411.1| glutamine ABC transporter permease protein [Burkholderia pseudomallei 9] gi|167851397|ref|ZP_02476905.1| glutamine ABC transporter permease protein [Burkholderia pseudomallei B7210] gi|167908342|ref|ZP_02495547.1| glutamine ABC transporter permease protein [Burkholderia pseudomallei NCTC 13177] gi|167916696|ref|ZP_02503787.1| glutamine ABC transporter permease protein [Burkholderia pseudomallei 112] gi|167924541|ref|ZP_02511632.1| glutamine ABC transporter permease protein [Burkholderia pseudomallei BCC215] gi|226199275|ref|ZP_03794835.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|238563691|ref|ZP_00438452.2| glutamine ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|242313823|ref|ZP_04812840.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|254177202|ref|ZP_04883858.1| glutamine ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|254182415|ref|ZP_04889009.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|254192463|ref|ZP_04898902.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|254203623|ref|ZP_04909984.1| glutamine ABC transporter, permease protein [Burkholderia mallei FMH] gi|254205492|ref|ZP_04911845.1| glutamine ABC transporter, permease protein [Burkholderia mallei JHU] gi|254296638|ref|ZP_04964094.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|121225391|gb|ABM48922.1| glutamine ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|126223345|gb|ABN86850.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126231991|gb|ABN95404.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|126238644|gb|ABO01756.1| glutamine ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|134246854|gb|EBA46941.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|147745862|gb|EDK52941.1| glutamine ABC transporter, permease protein [Burkholderia mallei FMH] gi|147755078|gb|EDK62142.1| glutamine ABC transporter, permease protein [Burkholderia mallei JHU] gi|157806531|gb|EDO83701.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|160698242|gb|EDP88212.1| glutamine ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|169649221|gb|EDS81914.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|184212950|gb|EDU09993.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|225928682|gb|EEH24709.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|238520179|gb|EEP83641.1| glutamine ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|242137062|gb|EES23465.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|243064781|gb|EES46967.1| glutamine ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|261826656|gb|ABN00010.2| glutamine ABC transporter, permease protein [Burkholderia mallei NCTC 10229] Length = 235 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 103/177 (58%), Gaps = 10/177 (5%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIV 87 F++ +I G F A + +++++ Y+ + RGTP++VQ+ +++ LP H+ I Sbjct: 50 GFLVGMIAGMFRA-----YGPAVLNVLAQVYIELIRGTPIVVQVMFLYFALPLLAHVRI- 103 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 D A ++++TLN AY++E++R +++SIPKG +A A+GL+ + + I+ P Sbjct: 104 -DGLSAAVVAITLNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLVKIVGPLAFRR 162 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 PL ++ I LK TS+ I + E+ + Q I++ +Q + I+ +A +YL+LT Sbjct: 163 LIAPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAAIYLVLTG 219 >gi|229075860|ref|ZP_04208836.1| Arginine transport system permease protein artQ [Bacillus cereus Rock4-18] gi|229098623|ref|ZP_04229563.1| Arginine transport system permease protein artQ [Bacillus cereus Rock3-29] gi|229117649|ref|ZP_04247020.1| Arginine transport system permease protein artQ [Bacillus cereus Rock1-3] gi|228665828|gb|EEL21299.1| Arginine transport system permease protein artQ [Bacillus cereus Rock1-3] gi|228684702|gb|EEL38640.1| Arginine transport system permease protein artQ [Bacillus cereus Rock3-29] gi|228707175|gb|EEL59372.1| Arginine transport system permease protein artQ [Bacillus cereus Rock4-18] Length = 225 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 66/198 (33%), Positives = 115/198 (58%), Gaps = 8/198 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I +S + I+G +A+ +I + ++ Y IF Sbjct: 11 FSAITPSIPYIL-KGLEVTLKIVAVSALAGFILGTLLALCKIARIRAL-NIAADLYTSIF 68 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P I G +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 69 RGTPLVLQLMIIYFGVPQIIGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 128 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 129 AMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 188 Query: 185 TYQPLIIYCE-LAFVYLI 201 T++ Y E L FV LI Sbjct: 189 TFK----YLEPLLFVGLI 202 >gi|323485322|ref|ZP_08090671.1| hypothetical protein HMPREF9474_02422 [Clostridium symbiosum WAL-14163] gi|323694083|ref|ZP_08108262.1| hypothetical protein HMPREF9475_03125 [Clostridium symbiosum WAL-14673] gi|323401358|gb|EGA93707.1| hypothetical protein HMPREF9474_02422 [Clostridium symbiosum WAL-14163] gi|323501800|gb|EGB17683.1| hypothetical protein HMPREF9475_03125 [Clostridium symbiosum WAL-14673] Length = 221 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 111/195 (56%), Gaps = 2/195 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D + + + TL +A I+ +IG +A++R+ + FY+W+ RGTP+ Sbjct: 10 DRYGFVYLQGLTGTLCLAAITVFFGTLIGMILAIMRLSRVKPF-QWFVRFYIWVLRGTPI 68 Query: 71 LVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 L+QL+ + LP + + III+L +N S+Y++E+IR+ I ++ KGQ +A+ ++G Sbjct: 69 LLQLYFFWIFLPRVLPVKISDSSCIIIALIINASSYVAEVIRAGIQAVDKGQTEAARSLG 128 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 +T T+ IILPQ I L +EFI+++K S+AS I E+ + + I S T++P+ Sbjct: 129 MTGSHTMTQIILPQAIKNILPALGNEFITMIKQASLASVFFINELTTSYKTISSATFRPV 188 Query: 190 IIYCELAFVYLILTS 204 +YL++T+ Sbjct: 189 EALMIAGIIYLMVTT 203 >gi|300312809|ref|YP_003776901.1| glutamine ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300075594|gb|ADJ64993.1| ABC-type glutamine transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 218 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 109/198 (55%), Gaps = 3/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I DS P LL A V L I V ++G ++R + +T++ I YV Sbjct: 5 FSVITDSLPALLEGAKVTVL-ITAAGLVGGTLVGLLAGLMRAY-GNTLLKGIGFGYVEFV 62 Query: 66 RGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTP++VQ+ I++ LP +GI D A + S+ +N AYI+EI+R + +S+P+G +A Sbjct: 63 RGTPIVVQVMFIYFALPVLLGIRVDPMTAAVTSIVVNSGAYIAEIVRGAFLSVPRGLREA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+GL + + +I P I + ++FI LK TS+ I + E+ + Q I++ Sbjct: 123 GLALGLPVWRVLAFVIGPVAIRRMVPAMGNQFIVSLKDTSLFIVIGVGELTRQGQEIMAA 182 Query: 185 TYQPLIIYCELAFVYLIL 202 ++ + I+ +A +YL + Sbjct: 183 NFRAVEIWIAVAAIYLCM 200 >gi|300087519|ref|YP_003758041.1| polar amino acid ABC transporter inner membrane subunit [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527252|gb|ADJ25720.1| polar amino acid ABC transporter, inner membrane subunit [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 275 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 111/201 (55%), Gaps = 15/201 (7%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ + ++++ L++G F + R+ + I L YV + RG PLLVQL ++ Sbjct: 61 GVAVTILVTISAYLLMLVVGLFGGLGRLAKNKFIFGLAT-IYVEVIRGIPLLVQLIGWYF 119 Query: 80 GLP----HIGIVFD----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 P +G + V II++T+ + AY+SEI+R+ I S+PKGQ +A+ Sbjct: 120 ASPVVIQAVGEWLNFAPLMEYRANPIVTAIIAITVCYGAYMSEIVRAGIQSVPKGQMEAA 179 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ Q +R +ILPQ P+ +EFI++LK +S+ S + + ++ + + +S Sbjct: 180 RSLGMNHFQAMRFVILPQAFRVILPPMGNEFIALLKDSSLVSVVAVADLTRRGREFMSAH 239 Query: 186 YQPLIIYCELAFVYLILTSFC 206 + P+ + +A +YLI+T F Sbjct: 240 FNPIETWTMVALLYLIMTLFA 260 >gi|212704997|ref|ZP_03313125.1| hypothetical protein DESPIG_03065 [Desulfovibrio piger ATCC 29098] gi|212671549|gb|EEB32032.1| hypothetical protein DESPIG_03065 [Desulfovibrio piger ATCC 29098] Length = 266 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 114/203 (56%), Gaps = 9/203 (4%) Query: 8 LIIDSFPQLLYAAIV-------VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 L+ + PQ+ AI+ +T + S ++ +G + RI + +L+ Sbjct: 45 LLCTTGPQVYRDAIIFLPDGLLLTFKVTAYSICGAVPLGLLTGLGRIS-RNRFFNLLAST 103 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + RG PLLVQ+F I++ + + + + + +I+L+ + AY+ E+ R+ I++IP G Sbjct: 104 YVEVIRGIPLLVQIFYIYFAISML-VKMEGVTSAVIALSFCYGAYMGEVFRAGILAIPHG 162 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++G R QT+ +++LPQ T P+ +E I++LK T++ S I +P++ Q A+ Sbjct: 163 QTEAARSLGFNRVQTMFYVVLPQAWRTIIPPVGNECIAMLKDTALVSVIGMPDLMQRARS 222 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 S +Y Y +A VYLI+T Sbjct: 223 FASKSYCYFESYTVVALVYLIIT 245 >gi|153009567|ref|YP_001370782.1| polar amino acid ABC transporter inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151561455|gb|ABS14953.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 277 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 124/222 (55%), Gaps = 12/222 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + +++ ++ +++TL + +S VI ++ I R+ ++ + I YV+ FRGT Sbjct: 55 LFETYGPRYWSGLLITLKLVAVSIVIGALLSLPITAARMS-NNRWLRGIAFGYVYFFRGT 113 Query: 69 PLLVQLFVIFYG-------LPHIGI-VF--DSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLL Q F+I+YG L IG+ VF D++ I++ +LN +AY +EI+R +I S+ Sbjct: 114 PLLAQTFLIYYGFGTFRPFLESIGLWVFFRDAWNCAILAFSLNTAAYQAEILRGAIQSVA 173 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQW+ + A+G++++ T +ILPQ + + P +E I ++K +++ + IT+ ++ Sbjct: 174 LGQWEGAAALGISKRVTFWKVILPQALIVALRPYGNEIILMIKGSAIVAIITVLDLMGET 233 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +R S T+ Y A +YL++ + +E +T+H Sbjct: 234 RRAYSRTFD-FQTYLWAAVIYLLIVECLRHVWDFLERRLTRH 274 >gi|309973357|gb|ADO96558.1| Arginine ABC transporter, permease protein ArtQ [Haemophilus influenzae R2846] Length = 221 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 65/219 (29%), Positives = 123/219 (56%), Gaps = 12/219 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFF-SDTIISLIMHFYVWIFRG 67 + F L++ A ++TL +A V SLI+G F+++I + ++ + M +V + RG Sbjct: 1 MFSDFLSLMFTAALMTLGLA----VCSLILGLFLSLIFVALEANRFVGKPMTVFVALLRG 56 Query: 68 TPLLVQLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 P ++ + ++++G L I F +F +++L+L F+AY S+ +R +I +IPKG Sbjct: 57 LPEIIVVLLVYFGSTELVEMLTGEYIEFGAFGCGVLALSLIFAAYASQTLRGAIQAIPKG 116 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW++ A+GL++ T HI++PQ + LS++++ +LK T++ S I + ++ A Sbjct: 117 QWESGAALGLSKSYTFIHIVMPQVWRHALPGLSTQWLVLLKDTALVSLIGVDDLMHQADL 176 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 I + T+QP Y A +YL +T + K+E T+ Sbjct: 177 INTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTR 215 >gi|332977916|gb|EGK14663.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Desmospora sp. 8437] Length = 217 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 111/193 (57%), Gaps = 12/193 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQ 73 L +VTL +A + ++S I G + V R T + L+ H Y+ I R PLL+ Sbjct: 15 LLEGFLVTLQVALFAILLSFIFGILLGVCRY----TRVPLLSHLATAYIEIVRNLPLLLI 70 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 +F ++GL G+ +++I+S+TL SA ++EI+RS + S+ KG +AS + G T Sbjct: 71 IFFGYFGLREWGLKLPVTLSVIVSMTLFTSALVAEIVRSGLNSVDKGLVEASRSQGFTYI 130 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLI 190 QT+RHI+LP + + P+ S+FIS++K TS+A I++PE+ AQ I + Y P++ Sbjct: 131 QTLRHIVLPLGLKRTIPPMVSQFISLIKDTSLAVVISLPEMTHNAQIIYNKHYNATIPML 190 Query: 191 IYCELAFVYLILT 203 I A VY I+ Sbjct: 191 ILV--ALVYFIVN 201 >gi|206563062|ref|YP_002233825.1| glutamine ABC transporter permease [Burkholderia cenocepacia J2315] gi|198039102|emb|CAR55065.1| glutamine ABC transporter, permease protein [Burkholderia cenocepacia J2315] Length = 218 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 116/207 (56%), Gaps = 8/207 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++W + I + P L+ + +T+ IA V ++G + R + ++++ Sbjct: 1 MNFDW-SAIWAALPDLM-DGVRLTVFIAFFGLVGGFVVGMIAGMFRAY-GPKAMNVLAQV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 Y+ + RGTP++VQ+ +++ LP HI I D A II++T+N AY++E++R +++SI Sbjct: 58 YIELIRGTPIVVQVMFLYFALPLLAHIRI--DGLTAAIIAITVNSGAYLAEVVRGALLSI 115 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKG +A A+GL+ + + ++ P PL ++ I LK TS+ I + E+ + Sbjct: 116 PKGLTEAGLAMGLSMPRVLLKVVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRK 175 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTS 204 Q I++ +Q + I+ +A +YL+LT Sbjct: 176 GQEIIAGNFQAVEIWTAVAVIYLLLTG 202 >gi|152970317|ref|YP_001335426.1| glutamine ABC transporter permease component [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206577693|ref|YP_002238436.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|238894801|ref|YP_002919535.1| glutamine ABC transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|288935410|ref|YP_003439469.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|290509460|ref|ZP_06548831.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55] gi|330010550|ref|ZP_08306783.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|150955166|gb|ABR77196.1| glutamine ABC transporter permease component [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206566751|gb|ACI08527.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|238547117|dbj|BAH63468.1| glutamine ABC transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288890119|gb|ADC58437.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] gi|289778854|gb|EFD86851.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55] gi|328534487|gb|EGF61075.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 221 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 65/198 (32%), Positives = 109/198 (55%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ + +P+LL A + VT+ + ++ + L IG A IR ++S + YV I Sbjct: 7 FSELWPHWPELL-AGLWVTVQLTVLATIGGLAIGILGAAIR-SGRPGMLSRVWGGYVEII 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP +VQLF I +GLP++G+ + A ++++ +N AY +EI+R+ I PKGQW+A Sbjct: 65 RNTPFVVQLFFIVFGLPNLGLKMTAGEAALLAMVVNLGAYSTEIVRAGIQVTPKGQWEAG 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GL+R QT ++LP + L S+ I ++ +SV S ++ E+ A I S T Sbjct: 125 RVLGLSRTQTFVRVVLPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFAANLIQSRT 184 Query: 186 YQPLIIYCELAFVYLILT 203 + +Y +YL L+ Sbjct: 185 FLSFEVYLVTTGIYLALS 202 >gi|324324591|gb|ADY19851.1| amino acid ABC transporter, permease protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 217 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 77/208 (37%), Positives = 117/208 (56%), Gaps = 6/208 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M NL+I+S PQLL + TL IAC + +IS I G +IR TI+ I Sbjct: 1 MGNSGINLLIESLPQLL-KGLEQTLLIACFTIIISTIGGILFGIIRTS-KITILRFISRT 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ +F P+LV LF+ F+GLP +GI S VA I +L+L I EI+R ++ S+PK Sbjct: 59 YIELFLSIPILVWLFLFFFGLPIALGIDVSSTVAAITALSLWGITEIGEIVRGALQSLPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A +IG+ +KQ +++++PQ I + FI I+++TS+ I + E+ + Q Sbjct: 119 GQVEAGKSIGMNKKQLYQYVLIPQAIRRMIPATINIFIRIIQTTSLTVLIGVTEVIKAGQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCY 207 +IV T + +IY L Y +L CY Sbjct: 179 QIVERTGEAFLIYGCLFIFYFLL---CY 203 >gi|298290458|ref|YP_003692397.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296926969|gb|ADH87778.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 219 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 115/214 (53%), Gaps = 7/214 (3%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D LL AA L ++ +SF+ I+G + IR + + YV +F+GTPL Sbjct: 8 DIVRNLLLAARWTVL-LSLVSFIGGSIVGALLLFIRTA-KGRLGPAFVKAYVEVFQGTPL 65 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L+QLF+ F+GL GI +++A ++L L +A+++EI R + S+ +GQW+AS ++G+ Sbjct: 66 LMQLFLAFFGLGLFGIDVPAWLAAGLALILWSAAFLTEIWRGCVESVARGQWEASSSLGM 125 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 Q +RH+ILPQ + + P + ++K T++ S I E+ + + + T++P Sbjct: 126 GYVQQMRHVILPQALRVAIPPTVGFSVQVVKGTALTSIIGFVELSKAGTVVTNATFEPFK 185 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 +Y +A +Y FC + S + + +V Sbjct: 186 VYGLVALIY-----FCLCWPLSKSSQILERKLNV 214 >gi|294084529|ref|YP_003551287.1| ABC transporter permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292664102|gb|ADE39203.1| ABC transporter permease protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 221 Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 71/227 (31%), Positives = 121/227 (53%), Gaps = 8/227 (3%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y W F + D++ L + TL + + ++ + +G F+A+ R + + Sbjct: 1 MTYYWNFQSVFDNW-WALAVGLGGTLRLFIVCLILGMSLGLFVALGRRSRTKAVRWASTA 59 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 F V FR TP+LVQ+ +Y LP + V F+A I+ ++LN +AY +EI R I SI Sbjct: 60 F-VEFFRNTPVLVQILWFYYALPILAPVEISPFIAAILGISLNSAAYSAEIYRGGIQSIE 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQW+A+ AIG+ Q +R I+LPQ I L++ I I K +++AS + E+ Q Sbjct: 119 PGQWEAAKAIGMNGLQVLRRIVLPQAIRRIVPALTNRGIEIFKMSTLASVVAYVEMLQQG 178 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + I S + PL +Y +A +++I+ Y + +++ +V +H D Sbjct: 179 KLIASLNFNPLEVYTVVAALFMII---LYPL-VRVTYAVERHLSRSD 221 >gi|307300617|ref|ZP_07580392.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|306904151|gb|EFN34736.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 288 Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 65/225 (28%), Positives = 122/225 (54%), Gaps = 21/225 (9%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +T+ + ++ VI +++G A++ + + +IS + + Y+W FRGTP+LVQL + +Y Sbjct: 53 GLSLTIWLTVVTMVIGVVLGTIFAIMAMA-DNVVISTVANAYIWFFRGTPVLVQL-IFWY 110 Query: 80 GL----PH--IGIVFDSF-------------VAIIISLTLNFSAYISEIIRSSIISIPKG 120 L P +G+ F S A ++ L LN AY+SEIIRS ++S+ G Sbjct: 111 NLGALFPQLSVGVPFTSLWVSVPTNTLISPVTAAVLGLGLNEGAYMSEIIRSGLMSVDPG 170 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q A+ ++G+T +T+ I+LPQ + P ++ I +LK++S+ S I++ ++ +AQ Sbjct: 171 QRQAAKSLGMTNGKTLWRILLPQAMPIIIPPTGNQTIGMLKTSSLVSVISLADLLYSAQT 230 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 I S +Q + + YL T+ +Q++IE + + + Sbjct: 231 IYSRNFQTIPLLIVACIWYLAATTILSAVQVRIERHFARSSQRAN 275 >gi|240850317|ref|YP_002971710.1| amino acid ABC transporter, permease protein [Bartonella grahamii as4aup] gi|240267440|gb|ACS51028.1| amino acid ABC transporter, permease protein [Bartonella grahamii as4aup] Length = 235 Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 115/211 (54%), Gaps = 12/211 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +VT+ + IS + +G IA R+ +T + + YV+ FRG+PLL QLF+ +Y Sbjct: 25 GFIVTVELVSISCSLGFFLGMLIAFARLS-KNTFLQYCANAYVYFFRGSPLLAQLFLFYY 83 Query: 80 GLP-------HIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 GL +G+ + +++ + TLN +AY SEI + S +S+ GQ +AS A+G Sbjct: 84 GLGSMNDFWQKVGLWWFFQNAWYCCLFIFTLNSAAYQSEIFKGSFLSVTTGQREASKALG 143 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+ T +ILPQ + + PL +E I ++KS+++AS IT+ ++ A+ S T+ Sbjct: 144 LSNSVTFFRVILPQAMIVALRPLGNELILMIKSSALASLITVYDLMGVAKLTYSRTFD-F 202 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +Y A +YL + + + IE +T++ Sbjct: 203 QVYVWAALIYLFIVELIHRFIVFIEQRLTRY 233 >gi|254250640|ref|ZP_04943959.1| ABC transporter, permease protein [Burkholderia cenocepacia PC184] gi|124879774|gb|EAY67130.1| ABC transporter, permease protein [Burkholderia cenocepacia PC184] Length = 237 Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 114/209 (54%), Gaps = 2/209 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 N ID P L +AA++ TL ++ V+ IG + R+ I YV +F Sbjct: 25 LNTFIDGLPLLFHAALM-TLEVSAAGLVLGFCIGLVVCCGRLA-PHVAIRTAAGAYVRVF 82 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG PLLVQL +++Y LP +G+ +A + +++L +AYI+EI+R ++PKGQ +A+ Sbjct: 83 RGVPLLVQLLLVYYFLPFVGLNVPPVMAAVSAVSLCSAAYIAEILRGGFANLPKGQLEAA 142 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +G + + I +PQ + + L +E + ++K++S+ S + + EI +TAQ I ++T Sbjct: 143 TMLGFSATDRLWRIQVPQAVRMTLPSLVNEMVLLIKASSLVSVVGVAEITRTAQNIAAST 202 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIE 214 YQPL Y +Y +L +I E Sbjct: 203 YQPLEAYVAAGMIYFLLCGSLALIAHGAE 231 >gi|328554363|gb|AEB24855.1| GlnM [Bacillus amyloliquefaciens TA208] gi|328912767|gb|AEB64363.1| putative glutamine transport system permease protein [Bacillus amyloliquefaciens LL3] Length = 216 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 111/200 (55%), Gaps = 9/200 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E F++ +D F L A+ I+ S +G IAV+RI + I I YV Sbjct: 8 ENFDMYMDGFLHTLLASF--------IALAGSFALGVLIAVMRIT-AFKPIQWIGTAYVE 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 R PLL+ FV ++GLP+ G+ D F A I+LT+ SA+I+E IR+ I ++ KGQ + Sbjct: 59 FIRNIPLLLITFVFYFGLPNAGLRLDGFQAGTIALTIYTSAFIAEAIRAGIQTVSKGQME 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ + G T Q +R++ILPQ + PL ++F++++K++S+ + ++ A + S Sbjct: 119 AARSSGFTYSQAMRYVILPQAVKIVIPPLGNQFLNLVKNSSILGVVAGLDLMYQADLVSS 178 Query: 184 TTYQPLIIYCELAFVYLILT 203 +T +Y +A YL+LT Sbjct: 179 STLVVFDVYIFVALFYLMLT 198 >gi|89099282|ref|ZP_01172160.1| YqiY [Bacillus sp. NRRL B-14911] gi|89086128|gb|EAR65251.1| YqiY [Bacillus sp. NRRL B-14911] Length = 219 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 94/145 (64%), Gaps = 4/145 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y IFRGTPL++QL +I+YG P I G + + A ++S LN +AYISEIIR+ I+++ K Sbjct: 58 YTSIFRGTPLVLQLMLIYYGSPQILGFQIEPYAAAVLSFGLNSAAYISEIIRAGILAVDK 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +AS A+G+ K+ + IILPQ + L +EFI++ K +++ +TI + +I + + Sbjct: 118 GQREASMALGIPYKRMMWDIILPQALKNILPALMNEFITLTKESAIVTTIGVMDIMRRSY 177 Query: 180 RIVSTTY---QPLIIYCELAFVYLI 201 ++ + Y +PL+I + +V +I Sbjct: 178 QVGAEKYSFFEPLLIAGLIYYVMVI 202 >gi|321312270|ref|YP_004204557.1| glutamine ABC transporter permease [Bacillus subtilis BSn5] gi|320018544|gb|ADV93530.1| glutamine ABC transporter (permease) [Bacillus subtilis BSn5] Length = 216 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 111/201 (55%), Gaps = 9/201 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++ F + +D F L A++ I+ S ++G +AV+RI + + YV Sbjct: 7 FDNFGMYMDGFYHTLLASV--------IALAGSFVLGVAVAVMRITVFKPL-QWLGTVYV 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 R PLL+ FV ++GLP+ G+ D F A ++LT+ SA+I+E IR+ I S+ KGQ Sbjct: 58 EFIRNIPLLLITFVFYFGLPNAGLRLDGFQAGTVALTIYTSAFIAEAIRAGIQSVSKGQM 117 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ + G T Q + HIILPQ I PL ++F++++K++S+ + ++ A + Sbjct: 118 EAARSSGFTYSQAMLHIILPQAIKIVIPPLGNQFLNLVKNSSILGVVAGLDLMYQADLVS 177 Query: 183 STTYQPLIIYCELAFVYLILT 203 S+T +Y +A YL+LT Sbjct: 178 SSTLVVFDVYIFVALFYLVLT 198 >gi|262044439|ref|ZP_06017500.1| amino acid ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038219|gb|EEW39429.1| amino acid ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 221 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/198 (32%), Positives = 109/198 (55%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ + +P+LL A + VT+ + ++ + L IG A IR ++S + YV I Sbjct: 7 FSELWPHWPELL-AGLWVTVQLTVLATIGGLAIGILGAAIR-SGRPGMLSRVWGGYVEII 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP +VQLF I +GLP++G+ + A ++++ +N AY +EI+R+ I PKGQW+A Sbjct: 65 RNTPFVVQLFFIVFGLPNLGLKMTAGEAALLAMMVNLGAYSTEIVRAGIQVTPKGQWEAG 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GL+R QT ++LP + L S+ I ++ +SV S ++ E+ A I S T Sbjct: 125 RVLGLSRTQTFVRVVLPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFAANLIQSRT 184 Query: 186 YQPLIIYCELAFVYLILT 203 + +Y +YL L+ Sbjct: 185 FLSFEVYLVTTGIYLALS 202 >gi|239834533|ref|ZP_04682861.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239822596|gb|EEQ94165.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 216 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 90/144 (62%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V RG PLLVQL + +Y LP IGI + VA ++++ + SAY+SEI R +II++P Sbjct: 56 LWVSFLRGVPLLVQLLLCYYLLPVIGINVPALVAAVVTVGICSSAYVSEIWRGAIIALPP 115 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ AIG+ + IILPQ S L +E I ++K++S+ S + I E+ + +Q Sbjct: 116 GQAEAATAIGMGPRDIWTRIILPQAARLSLPALVNEMILLVKASSLVSVVGILEVTRASQ 175 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 +TT++PL +Y A +YL++ Sbjct: 176 AQAATTFRPLEVYVAAACIYLLIN 199 >gi|124268065|ref|YP_001022069.1| amino acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine [Methylibium petroleiphilum PM1] gi|124260840|gb|ABM95834.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Methylibium petroleiphilum PM1] Length = 229 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 109/212 (51%), Gaps = 21/212 (9%) Query: 6 FNLIIDSFPQLLYA-AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 F I +S P LYA + TL + IS I L+ +AV+R+ S +H VW Sbjct: 3 FEAIAESLP--LYASGLATTLQLLLISLAIGLVAALPLAVLRVSASR-----WLHGPVWC 55 Query: 65 F----RGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIR 111 F RGTPLLVQLF+++YGL V S + ++ +N AY +EII Sbjct: 56 FTYVIRGTPLLVQLFLVYYGLAQFEWVRASIAWPWLQSAWFCACLAFAVNTCAYTTEIIA 115 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S+ + P G+ +A+ A+GL+R Q R I+LP + + +E + +L TS+AS +T+ Sbjct: 116 GSLKATPHGEVEAARALGLSRAQVWRRILLPSALRRALPAYGNEAVLMLHGTSLASVVTL 175 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ A+ + S Y P + A VYL LT Sbjct: 176 LDLTGAAREVNSRFYLPFEAFLTAAAVYLGLT 207 >gi|195973407|gb|ACG63350.1| allantoate transport membrane protein [Klebsiella oxytoca M5al] Length = 221 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ + +P+LL A + VT+ + ++ + L IG F A +R T S I YV + Sbjct: 7 FSELWPHWPELL-AGLWVTIQLTVLATIGGLTIGIFGAAVR-SGRPTWFSRIWGGYVELI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP +VQLF I +GLP++G+ + A ++++ +N AY +EI+R+ I PKGQW+A Sbjct: 65 RNTPFVVQLFFIVFGLPNLGLKMTAGEAALLAMVVNLGAYSTEIVRAGIQVTPKGQWEAG 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GLTR QT +ILP + L S+ I ++ +SV ++ ++ A I S T Sbjct: 125 RVLGLTRTQTFIQVILPPALQRIYPALVSQCIIVMLGSSVGCQVSYEKLTFAAHLIQSRT 184 Query: 186 YQPLIIYCELAFVYLILT 203 + +Y +YL L+ Sbjct: 185 FLSFEVYLVTTGIYLALS 202 >gi|89072893|ref|ZP_01159450.1| putative amino acid ABC transporter, permease protein [Photobacterium sp. SKA34] gi|89051415|gb|EAR56870.1| putative amino acid ABC transporter, permease protein [Photobacterium sp. SKA34] Length = 272 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 134/219 (61%), Gaps = 19/219 (8%) Query: 4 EWFNL-IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL-IMHFY 61 EWF+ +ID +++T+ I+ IS + ++I G A++R+ S +I+ + Y Sbjct: 63 EWFSAELID--------GLLITIKISAISLIFTVIFGLVTALLRL--SHSIVGRSLARGY 112 Query: 62 VWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + + R TPLLVQ++++++ P +G+ + F ++ L+L AY +EI RS +++IPKG Sbjct: 113 IEVIRNTPLLVQIYLLYFVFGPVLGL--ERFTTAVLGLSLFQGAYTAEIFRSGLMNIPKG 170 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ ++GL++ + R+IILPQ + L++E +S++K++S+ S + I ++ + Sbjct: 171 QFEAAESLGLSKVDSYRYIILPQMLRRILPALTNEAVSLVKNSSIVSIMAIFDLTTQGRD 230 Query: 181 IVSTTYQPLIIYCELAFVY----LILTSFCYIIQIKIES 215 IV+ T P I+ +A +Y L+L++F +++ K+ + Sbjct: 231 IVADTAMPFEIWFTIAAMYLCITLLLSAFATLLEHKLAT 269 >gi|222823907|ref|YP_002575481.1| amino acid ABC transporter permease, His/Glu/Gln/Arg/opine family [Campylobacter lari RM2100] gi|222539129|gb|ACM64230.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter lari RM2100] Length = 260 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 107/187 (57%), Gaps = 3/187 (1%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+SL++G A+I + S I L F ++ + RGTPLLVQ+ +I+Y + + Sbjct: 72 VLSLVVGVIFALILCYMSLCKIVLFNMFARVFIELVRGTPLLVQILLIYYIFADNLGLDN 131 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 +V ++ L L SAYI EI R+ I+S+ K Q++++ A+GL+ + + +I PQ + Sbjct: 132 RYVCGVLILALFASAYICEIFRAGILSVDKMQYESAKALGLSEFEIYKSVIFPQALKNIL 191 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYII 209 PLS + +++K +S+ S I I E+ Q AQ I + T+ L IY LA YL+LT + Sbjct: 192 APLSGQLSNLIKDSSLLSVIAISELTQNAQEINAFTFSTLEIYIPLALCYLVLTLPISMF 251 Query: 210 QIKIESS 216 K+E S Sbjct: 252 SRKLEKS 258 >gi|222480219|ref|YP_002566456.1| polar amino acid ABC transporter, inner membrane subunit [Halorubrum lacusprofundi ATCC 49239] gi|222453121|gb|ACM57386.1| polar amino acid ABC transporter, inner membrane subunit [Halorubrum lacusprofundi ATCC 49239] Length = 308 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/197 (33%), Positives = 111/197 (56%), Gaps = 15/197 (7%) Query: 34 ISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 +SL++GFFIAV R++ + + Y + RGTPLL QLFV++YGL V Sbjct: 103 MSLVLGFFIAVPLAVTRVY--GRFSAWLSLAYTELLRGTPLLAQLFVLYYGLNLASYVPG 160 Query: 90 SFVAI---------IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 S + I+ TLN +AY +E IR ++ S+ +GQ A AIGL++ +TI +++ Sbjct: 161 SVSGVFARDVVWVAILGFTLNGAAYQAEYIRGALESVEEGQITAGRAIGLSKVETIYYVV 220 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LPQ + + ++EF+ ++K +S+A+ IT+PE++ A +I S T++ +I+ YL Sbjct: 221 LPQGLRYAIPSWTNEFVYLIKYSSLAAFITVPELYYRADQIASETFRYTLIFVVTGLTYL 280 Query: 201 ILTSFCYIIQIKIESSV 217 L + ++E V Sbjct: 281 ALVLTASKLMERVEERV 297 >gi|317052938|ref|YP_004119292.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316953265|gb|ADU72736.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 223 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 6/205 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y+W I + LL + T+ I S + ++ G +A+++ + ++ SL + Sbjct: 1 MSYQWDFAAIWPYRMLLLEGLWGTIQIGVTSIIFGMLAGMVLAIMK---NSSLRSLRIPA 57 Query: 61 YVWI--FRGTPLLVQLFVIFYGLPHIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 V I +R TP +V F I+Y LP I + F A +++L+ +A+ +E+ R I SI Sbjct: 58 MVLIGFYRNTPAIVHFFWIYYALPVISPLTLSPFAAAVLALSAQSAAFYAEVYRGGIQSI 117 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQW+ + A+G+ R +R II PQ + P +LKST++AS++ E+ Sbjct: 118 SAGQWEGAKALGMPRSTALRRIIFPQALRRMIPPFLERSFELLKSTALASSLAYSELLYQ 177 Query: 178 AQRIVSTTYQPLIIYCELAFVYLIL 202 A ++ S TY+PL +Y +A +Y L Sbjct: 178 AMQVNSQTYRPLEVYSVIAVMYFTL 202 >gi|167567070|ref|ZP_02359986.1| glutamine ABC transporter permease protein [Burkholderia oklahomensis EO147] gi|167574147|ref|ZP_02367021.1| glutamine ABC transporter permease protein [Burkholderia oklahomensis C6786] Length = 218 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 116/207 (56%), Gaps = 8/207 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P L+ + +T+ IA ++G + R + ++++ Sbjct: 1 MQFDW-SAIWAALPDLM-DGVKLTVFIAFFGLAGGFLVGMVAGMFRAY-GPAALNVLAQV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 Y+ + RGTP++VQ+ +++ LP HI I D A I+++TLN AY++E++R +++SI Sbjct: 58 YIELIRGTPIVVQVMFLYFALPLLAHIRI--DGLTAAIVAITLNSGAYLAEVVRGALLSI 115 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKG +A A+GL+ + + I+ P PL ++ I LK TS+ I + E+ + Sbjct: 116 PKGLTEAGLAMGLSMPRVLVKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRK 175 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTS 204 Q I++ +Q + I+ +A +YL+LT Sbjct: 176 GQEIIAGNFQAVEIWSAVAAIYLVLTG 202 >gi|78186898|ref|YP_374941.1| amino acid ABC transporter permease [Chlorobium luteolum DSM 273] gi|78166800|gb|ABB23898.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Chlorobium luteolum DSM 273] Length = 990 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 116/207 (56%), Gaps = 7/207 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+I ++ +L+ + + VT+ I+ +S + ++G + +R+ + T+ +L ++ + R Sbjct: 771 NIIKENRWKLILSGLRVTVIISVLSALFGTVLGAGVCAMRMSSAKTLKTL-ASVFISLLR 829 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTP+LV L +IFY + + D +I+ LNF+AY++EI RS + SI GQ +A Sbjct: 830 GTPVLVLLMLIFY-VVFASVSIDPVAVAVIAFGLNFAAYVAEIFRSGVESIDNGQREAGI 888 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G TR +T IILPQTI EF+S++K TS+ I + ++ + I S T+ Sbjct: 889 SMGFTRLRTFLLIILPQTIQRILPVYKGEFLSLVKMTSIVGYIAVEDLTKAGDIIRSRTF 948 Query: 187 Q---PLIIYCELAF--VYLILTSFCYI 208 PLI+ L F +L+L S Y+ Sbjct: 949 DAFFPLIMVAILYFSISWLLLQSMAYL 975 >gi|329118223|ref|ZP_08246933.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Neisseria bacilliformis ATCC BAA-1200] gi|327465644|gb|EGF11919.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Neisseria bacilliformis ATCC BAA-1200] Length = 239 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 103/179 (57%), Gaps = 2/179 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + ++ P+ AA +TL ++ +SL+ G +AV+ + + + Y+ + R T Sbjct: 26 LFNAVPKFAEAA-KLTLELSLYGIALSLLFGLAVAVVTAYKIRPLYA-PARAYIELSRNT 83 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF ++YGLP GI +D F +I+L ++Y++E +R+ I+++P+GQ +A A+ Sbjct: 84 PLLIQLFFLYYGLPKAGIKWDGFTCGVIALAFLGASYMAEALRAGILAVPQGQIEAGKAV 143 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GL+R Q R++ LPQ + + + + ++K TSV S + + E+ + I+ Y+ Sbjct: 144 GLSRWQVFRYVELPQAWAVALPAVGANVLFLIKETSVVSAVGVAELLFVTKDIIGMDYK 202 >gi|170696518|ref|ZP_02887642.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170138565|gb|EDT06769.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 248 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 106/191 (55%), Gaps = 1/191 (0%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 + +L + VTL + IS ++ ++G A + + ++ YV + R TP +V Sbjct: 13 YAGMLARGVAVTLGLTAISTLLGALVGIAGASVAVA-GPKWARWVVASYVELIRNTPFIV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF +F+GLP +GI D A I+++T+N AY EI+R+ I SI +GQ A+ A+GL Sbjct: 72 QLFFVFFGLPTLGIHIDEMQAAILAMTVNLGAYAIEIVRAGIDSISRGQVQAAQALGLHG 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +Q R+I+LPQ + L S+ + ++ ++V S I++P++ A + S ++ Y Sbjct: 132 RQVFRYIVLPQALANVFPALLSQVLIVMLGSAVVSQISVPDLTYAANFVQSRNFRSFESY 191 Query: 193 CELAFVYLILT 203 + YL+L+ Sbjct: 192 LIITATYLLLS 202 >gi|30264228|ref|NP_846605.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47529671|ref|YP_021020.1| amino acid ABC transporter permease [Bacillus anthracis str. 'Ames Ancestor'] gi|47568216|ref|ZP_00238920.1| MW1799 [Bacillus cereus G9241] gi|49187056|ref|YP_030308.1| amino acid ABC transporter permease [Bacillus anthracis str. Sterne] gi|49480913|ref|YP_038216.1| amino acid ABC transporter permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141345|ref|YP_085484.1| amino acid ABC transporter, permease [Bacillus cereus E33L] gi|65321542|ref|ZP_00394501.1| COG0765: ABC-type amino acid transport system, permease component [Bacillus anthracis str. A2012] gi|190565774|ref|ZP_03018693.1| amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|196034913|ref|ZP_03102320.1| amino acid ABC transporter, permease protein [Bacillus cereus W] gi|196047222|ref|ZP_03114438.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB108] gi|218905289|ref|YP_002453123.1| amino acid ABC transporter, permease protein [Bacillus cereus AH820] gi|225866135|ref|YP_002751513.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB102] gi|227816929|ref|YP_002816938.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|229163089|ref|ZP_04291045.1| Arginine transport system permease protein artQ [Bacillus cereus R309803] gi|229603243|ref|YP_002868448.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] gi|254683918|ref|ZP_05147778.1| amino acid ABC transporter, permease component [Bacillus anthracis str. CNEVA-9066] gi|254721753|ref|ZP_05183542.1| amino acid ABC transporter, permease component [Bacillus anthracis str. A1055] gi|254736266|ref|ZP_05193972.1| amino acid ABC transporter, permease component [Bacillus anthracis str. Western North America USA6153] gi|254744155|ref|ZP_05201838.1| amino acid ABC transporter, permease component [Bacillus anthracis str. Kruger B] gi|254754062|ref|ZP_05206097.1| amino acid ABC transporter, permease component [Bacillus anthracis str. Vollum] gi|254758245|ref|ZP_05210272.1| amino acid ABC transporter, permease component [Bacillus anthracis str. Australia 94] gi|301055646|ref|YP_003793857.1| amino acid ABC transporter permease [Bacillus anthracis CI] gi|30258873|gb|AAP28091.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47504819|gb|AAT33495.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. 'Ames Ancestor'] gi|47555206|gb|EAL13553.1| MW1799 [Bacillus cereus G9241] gi|49180983|gb|AAT56359.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Sterne] gi|49332469|gb|AAT63115.1| amino acid ABC transporter, permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974814|gb|AAU16364.1| amino acid ABC transporter, permease [Bacillus cereus E33L] gi|190562693|gb|EDV16659.1| amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|195992452|gb|EDX56413.1| amino acid ABC transporter, permease protein [Bacillus cereus W] gi|196021971|gb|EDX60662.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB108] gi|218537877|gb|ACK90275.1| amino acid ABC transporter, permease protein [Bacillus cereus AH820] gi|225787572|gb|ACO27789.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB102] gi|227002630|gb|ACP12373.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|228620495|gb|EEK77365.1| Arginine transport system permease protein artQ [Bacillus cereus R309803] gi|229267651|gb|ACQ49288.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] gi|300377815|gb|ADK06719.1| amino acid ABC transporter, permease [Bacillus cereus biovar anthracis str. CI] Length = 219 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 120/215 (55%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I +S + I+G +A+ +I + ++ Y IF Sbjct: 5 FSAITPSIPYIL-KGLEVTLKIVAVSALAGFILGTLLALCKIARIRAL-NIAADLYTSIF 62 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P I G +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 63 RGTPLVLQLMIIYFGVPQIIGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 123 AMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y +L ++ IE + + Sbjct: 183 TFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKK 217 >gi|315640503|ref|ZP_07895611.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] gi|315483707|gb|EFU74195.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] Length = 547 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 114/201 (56%), Gaps = 17/201 (8%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + +S +I L +GF IAV++I + +++ I +V RGTP LVQLF+ FYG P Sbjct: 337 ITLLMTVVSAIIGLGLGFLIAVVKIRNT-PVLTQICSVFVSFMRGTPQLVQLFLSFYGFP 395 Query: 83 --------HIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +G+ + + V + I+ LN +AY SE R++++S+ K + +A+ +IG Sbjct: 396 ILVEWLSQQMGVTANVNAIPALVYVFIAFGLNEAAYTSETFRAALLSVNKNEIEAARSIG 455 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 LT QT+ IILP + + L + FIS+LK+TS+A T+TI +I + I + Sbjct: 456 LTNVQTMMRIILPSALIVALPNLVNSFISLLKATSLAFTVTIIDIMGQTRIIAGANLRFF 515 Query: 190 IIYCELAFVYLILTSFCYIIQ 210 Y +A VY ++ C +I+ Sbjct: 516 EAYIAVALVYWVM---CLLIE 533 >gi|313885683|ref|ZP_07819432.1| putative glutamine ABC transporter, permease protein GlnP [Eremococcus coleocola ACS-139-V-Col8] gi|312619048|gb|EFR30488.1| putative glutamine ABC transporter, permease protein GlnP [Eremococcus coleocola ACS-139-V-Col8] Length = 218 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 70/215 (32%), Positives = 121/215 (56%), Gaps = 7/215 (3%) Query: 12 SFPQL--LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 S PQ L + +T+ ++ I+ VI+LI+G + +R F + I+S ++ + R P Sbjct: 8 SMPQFSFLLQGLWLTITVSSITIVIALILGIILGTLR-FENIPILSDLLGLIIDTIRNLP 66 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+ +F ++ LP IGI F F + + +++L S +SEIIRS + +PKGQ +A YA G Sbjct: 67 LLLIIFFTYFALPQIGIRFSVFWSTVAAMSLFESCMVSEIIRSGLKGLPKGQAEAGYAAG 126 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 LT Q + I+LPQ + + S+ I+++K TS+A+ I +PEI A+ I + + Sbjct: 127 LTTWQVLSLILLPQAVRNMITSIISQLIALIKDTSLATIIALPEIMHNAKIIYNQDVSAI 186 Query: 190 II-YCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 II + +A +Y ++ CY + + + TY+ Sbjct: 187 IITFFIVAVLYFLV---CYSLSLLGRRFEVKRTYN 218 >gi|291458315|ref|ZP_06597705.1| ABC transporter, permease protein, polar amino acid uptake family [Oribacterium sp. oral taxon 078 str. F0262] gi|291418848|gb|EFE92567.1| ABC transporter, permease protein, polar amino acid uptake family [Oribacterium sp. oral taxon 078 str. F0262] Length = 262 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 123/199 (61%), Gaps = 5/199 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++A VTL IA I+ SL++G IAVI ++ ++ +V RGTP++ QL+ Sbjct: 56 VFAKTPVTLEIALIAAFFSLLLGMIIAVI-AYYRLPLLYPAARAFVSFMRGTPIVAQLYF 114 Query: 77 IFYGLP-HIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 ++G+ + +V D A+ + L+LN A++SE IR++++S+ GQ +A+ ++G++ Sbjct: 115 FYFGVAVYSALVRDMTPVTAVSLVLSLNVGAFMSESIRAALLSVDDGQREAALSLGMSNL 174 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q +R II+PQ + + PL ++FI+++K++S+A + +P+I A+ S TY+ IY Sbjct: 175 QIVRRIIIPQALRVALPPLFNDFINLIKASSLAFMLGVPDIMGAARTEGSRTYRYFEIYG 234 Query: 194 ELAFVY-LILTSFCYIIQI 211 + VY +++T+F ++ ++ Sbjct: 235 AVMVVYWVVITAFDFLRKL 253 >gi|300855936|ref|YP_003780920.1| putative amino acid ABC transporter permease [Clostridium ljungdahlii DSM 13528] gi|300436051|gb|ADK15818.1| predicted ABC-type aminoacid transporter, permease component [Clostridium ljungdahlii DSM 13528] Length = 221 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 130/222 (58%), Gaps = 12/222 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++WF I+ FP +L ++ +T+ I+ +S + +L++ I++IR + + L F V Sbjct: 5 FQWF---INLFPIVL-PSLKLTIEISLVSLIFTLLLSVVISIIRYY---KVWGLYQLFGV 57 Query: 63 WI--FRGTPLLVQLFVIFYGLPHIGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISI 117 +I FR TPL+ QLF++++GLP + S F A +I+LTLN +++++E +R+++ S+ Sbjct: 58 YITFFRATPLVAQLFMLYFGLPCVIPALKSMTAFQATVIALTLNTASFMAETLRAALESV 117 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQ +A Y++ +T+ QT+ ++LPQ + L ++FI I+K +++ T+ + +I Sbjct: 118 EVGQLEACYSMSMTKYQTMMRVVLPQAFVVALPSLGNQFIGIIKGSALGFTVGLADIMAK 177 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 A+ + T + Y + +YL++ F IQ +E + + Sbjct: 178 AKTEAALTLRFFEAYLCVTLIYLVIVIFVEKIQRLVEKRIQK 219 >gi|251788515|ref|YP_003003236.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247537136|gb|ACT05757.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 221 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/197 (32%), Positives = 110/197 (55%), Gaps = 10/197 (5%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 +P+LL A + VT+ + ++ + + IG A +R T +S + YV + R TP +V Sbjct: 14 WPELL-AGLWVTVQLTTMATLGGIAIGICGAALRSG-KPTFVSRLWGLYVELIRNTPFVV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I +GLP +G+ + A ++++ +N AY +EIIR+ I PKGQW+A+ +GL+R Sbjct: 72 QLFFIVFGLPGLGLKLTAGQAALLAMLVNLGAYSTEIIRAGIQVTPKGQWEAARVLGLSR 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT +ILP + L S+ I ++ +SV S ++ E+ A I S T+ Sbjct: 132 AQTFTRVILPPALQRIYPALVSQCIIVMLGSSVVSQVSFEELTFAANLIQSRTF------ 185 Query: 193 CELAFVYLILTSFCYII 209 L+F ++T+ CY++ Sbjct: 186 --LSFEVYLVTTLCYLV 200 >gi|163843976|ref|YP_001628380.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis ATCC 23445] gi|163674699|gb|ABY38810.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445] Length = 232 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 122/209 (58%), Gaps = 12/209 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMHFYVWIFRG 67 +FPQLL AI L I+ I+ +++LI G + ++R I + +I +++ F RG Sbjct: 23 GAFPQLL-PAIGTNLVISIIAMILALIGGTALTILRTLGIAPLNAVIGVVISF----IRG 77 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TP+LVQ+F+ +YGLP +G+ A I+++ N S +I+EI+R + + G +A+ A Sbjct: 78 TPILVQIFLFYYGLPALGLDLSPIQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIA 137 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ K +ILPQ PL +E +I+K T++ S IT+ E+ +TAQ++ + +++ Sbjct: 138 LGIKGKVIWTKVILPQLYIRIMPPLVNELTTIVKGTALLSVITVVEVLRTAQQVANASFR 197 Query: 188 PL-IIYCE---LAFVYLILTSFCYIIQIK 212 PL + C L V L+L+ +++++ Sbjct: 198 PLETLLCAAIILFAVNLVLSQCGRVLEMR 226 >gi|148828330|ref|YP_001293083.1| arginine transporter permease subunit ArtM [Haemophilus influenzae PittGG] gi|148719572|gb|ABR00700.1| arginine transporter permease subunit ArtM [Haemophilus influenzae PittGG] Length = 227 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 111/197 (56%), Gaps = 15/197 (7%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 I+F ++L + F +++ + + ++ Y+ +F GTPLLVQ F+I+ G + D Sbjct: 26 IAFCLALFLTFLLSM-----ENKWVKRAVNLYLTLFTGTPLLVQFFLIYAGPGQFQWIID 80 Query: 90 S---------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 S + +++L LN +AY +++ ++ +IPKGQW++ A+GL R QT++ I+ Sbjct: 81 SPLWYVLSNAWFCAVLALALNSAAYSTQLFHGAVKAIPKGQWESCGALGLNRIQTLK-IL 139 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 +P + + S+E I + K T++ASTITI +I A+++ T Y + IY +YL Sbjct: 140 IPYALKRALPSYSNEIILVFKGTALASTITIMDIMGYARQLYGTEYDAITIYGIAGGIYL 199 Query: 201 ILTSFCYIIQIKIESSV 217 I+T ++ K+E V Sbjct: 200 IITGIATLLLRKLEKKV 216 >gi|91779493|ref|YP_554701.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91692153|gb|ABE35351.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] Length = 567 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/154 (36%), Positives = 93/154 (60%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+W RGTP L+QL IF LP IG+ FD +I LN +A+ +E+ R+ I+S+ + Sbjct: 94 YIWFVRGTPQLLQLVFIFDALPLIGLRFDEVTTAVIGFALNEAAFSAELFRAGILSVNRS 153 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q A+ A+G+ T+R IILPQ++ L+++ I +LK TS+AS I + E+ +Q+ Sbjct: 154 QSIAAAALGMGPLLTLRRIILPQSMRAVIPGLANDTIGMLKLTSIASVIFVNELTFRSQQ 213 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 +V ++ ++ A +YL LTS ++Q+ +E Sbjct: 214 VVGQNFKFFTVFGAAAVIYLFLTSGISLLQVWLE 247 >gi|332522647|ref|ZP_08398899.1| ABC transporter, permease protein [Streptococcus porcinus str. Jelinkova 176] gi|332313911|gb|EGJ26896.1| ABC transporter, permease protein [Streptococcus porcinus str. Jelinkova 176] Length = 523 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 97/167 (58%), Gaps = 1/167 (0%) Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ Y+ +FRGTP++VQ VI+YG GI D +A I +++N AY++EI+R I + Sbjct: 343 LNIYIEVFRGTPMIVQSMVIYYGTAQAFGISIDRTLAAIFIVSINTGAYMTEIVRGGIFA 402 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + +GQ++A+ A+G + QT+R I+LPQ I +EF+ +K TSV + I++ E++ Sbjct: 403 VDQGQFEAATALGFSHGQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVVELYF 462 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + + + YQ + +A +Y ILT I +E + TY+ Sbjct: 463 SGNTVATQNYQYFQTFSVIALIYFILTFTVTRILRYVERRLDDDTYT 509 >gi|284163417|ref|YP_003401696.1| polar amino acid ABC transporter inner membrane protein [Haloterrigena turkmenica DSM 5511] gi|284013072|gb|ADB59023.1| polar amino acid ABC transporter, inner membrane subunit [Haloterrigena turkmenica DSM 5511] Length = 339 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 14/200 (7%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY------GLPHI 84 S + L+I +AV+R++ Y + RGTPLL QLFV++Y L + Sbjct: 119 SIALGLVIAVPVAVVRVYGGP--FRWFALAYTELIRGTPLLAQLFVLYYTPYLSVRLSDV 176 Query: 85 GIVFDSFVA------IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 ++ FV I+ T+N SAY +E IR ++ S+ +GQ A+ AIGL++ + IRH Sbjct: 177 DLIGRGFVPEYAFWIAIVGFTINGSAYQAEYIRGALESVDEGQLTAARAIGLSKLEGIRH 236 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 ++LPQT+ ++E + ++K +S+A IT+PE++ A I S+T++ IY L V Sbjct: 237 VVLPQTLRYGIPAWTNELVYLIKYSSLAGFITVPELYYRASDIASSTFEYTPIYVLLGLV 296 Query: 199 YLILTSFCYIIQIKIESSVT 218 Y+ L + ++E V Sbjct: 297 YIGLVLSATNVMSRVERRVA 316 >gi|297157335|gb|ADI07047.1| permease [Streptomyces bingchenggensis BCW-1] Length = 314 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 120/219 (54%), Gaps = 22/219 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + +T+ I S V+ +++G +AV+R+ + + + I Y+W FRGTP+ V Sbjct: 64 FDDRILKGAGMTVWITIASMVLGVVLGILLAVMRLS-KNPVSAAIAWGYIWFFRGTPVYV 122 Query: 73 QLFVIFYGLPHIGIVFD-----------------SFVAIIISLTLNFSAYISEIIRSSII 115 QL V F ++G++F F+A ++ L LN +AY++EI R+ ++ Sbjct: 123 QLLVWF----NLGLIFHYINLGPIYQDEWSDFMTPFLAALLGLGLNEAAYMAEICRAGLL 178 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ +GQ +A++A+G++ +T+R I+LPQ + P +EFI++LK+TS+ + + E+ Sbjct: 179 AVDEGQTEAAHALGMSHAKTLRRIVLPQAMRVIVPPTGNEFINMLKTTSLLAVVQYGELL 238 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + AQ I + + A YLILTS + Q +E Sbjct: 239 RGAQDIAQDSGSTTEMLFLAALWYLILTSVLSVGQYYLE 277 >gi|160934032|ref|ZP_02081419.1| hypothetical protein CLOLEP_02894 [Clostridium leptum DSM 753] gi|156866705|gb|EDO60077.1| hypothetical protein CLOLEP_02894 [Clostridium leptum DSM 753] Length = 244 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 73/210 (34%), Positives = 118/210 (56%), Gaps = 27/210 (12%) Query: 24 TLPIACISFVISLIIGFFIAVI--------RIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 TL I+ ++ VI + +G IAV+ R+ ++ I SL YV + RGTP+++QL Sbjct: 42 TLLISLMAVVIGITLGVLIAVVVNAAKANPRLNWAKKICSL----YVTVIRGTPVVLQLM 97 Query: 76 VIFYGLPHIGIVFDS-----FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 +I+Y I+F S V ++ LN +AYISEIIRS I SI +GQ +A+ ++GL Sbjct: 98 IIYY------IIFRSVQIPQIVVGGLAFGLNSAAYISEIIRSGIESIDRGQMEAARSLGL 151 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--- 187 +R + +R IILPQ + L +EF++++K TSVA I + ++ + + + S TY Sbjct: 152 SRGKAMRLIILPQAVKNILPALGNEFVTLVKETSVAGYIGLRDLTKASDIVASRTYDYFV 211 Query: 188 PLII-YCELAFVYLILTSFCYIIQIKIESS 216 PLI+ C + L LT + + ++ S Sbjct: 212 PLILAACVYLVIVLGLTKLVRMFERRLAQS 241 >gi|86360915|ref|YP_472802.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86285017|gb|ABC94075.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 208 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 55/158 (34%), Positives = 92/158 (58%), Gaps = 1/158 (0%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 + +++++G +A+ R IS + F RGTPLLVQL+ IFY LP IGI Sbjct: 17 LGAAVAMVVGLGLAIAR-RSPVAAISRTVGFVSEFIRGTPLLVQLYFIFYVLPDIGIRLS 75 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 A +I + ++++ Y +E+ R+ I ++ +GQW+A+ A LT +Q H+ILPQ I Sbjct: 76 PLTAGVIGIGIHYATYTAEVYRAGIENVSRGQWEAAKATNLTTRQAWIHVILPQAIPPMI 135 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 L++ FI++ K T + S IT+ E+ A+ I ++ Y+ Sbjct: 136 PALANYFIAMFKETPLLSAITVLELMNQAKSIANSNYR 173 >gi|145592264|ref|YP_001154266.1| polar amino acid ABC transporter, inner membrane subunit [Pyrobaculum arsenaticum DSM 13514] gi|145284032|gb|ABP51614.1| polar amino acid ABC transporter, inner membrane subunit [Pyrobaculum arsenaticum DSM 13514] Length = 199 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/167 (37%), Positives = 98/167 (58%), Gaps = 7/167 (4%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 I T+ +A +SF I + +G + ++R FF +S YV FRGTPLLVQ+F+I+ Sbjct: 15 GGIPTTMALALLSFAIGMGLGSILLLVR-FFLPKPLSWFASAYVEAFRGTPLLVQIFIIY 73 Query: 79 YG----LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +G L GI D F A +I+L LN +AY +EI RS++ +IP Q+ + A + Q Sbjct: 74 FGVGGFLKDYGINIDPFTAGVIALGLNSAAYQAEIFRSAVQAIPVEQYLTAEAYAFGKTQ 133 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI--PEIFQTAQ 179 T R+IILPQ + + L +E + ++K +S+ S I + P+IF+ A Sbjct: 134 TFRYIILPQALRIALPALMNEMVLLIKDSSLVSVIGVTPPDIFRRAD 180 >gi|295426472|ref|ZP_06819122.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus amylolyticus DSM 11664] gi|295063840|gb|EFG54798.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus amylolyticus DSM 11664] Length = 219 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 70/224 (31%), Positives = 124/224 (55%), Gaps = 13/224 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W ++ L + VT+ ++ IS ++S ++G ++R + +S I+ F + Sbjct: 8 YSWVDI------HFLLQGLWVTIYVSLISIILSFVLGLIFGLLR-YMKIKYVSAIVGFVI 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP +GIV + A II+L + A ++EI+RS I SI GQ Sbjct: 61 DIIRNLPLLLIIFFTYFGLPELGIVTNQTAASIIALVIFEGAMLAEIVRSGISSIDPGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + G+T Q + H+++PQ + L S+F+S++K TS+A+ I +PE+ AQ I Sbjct: 121 EGARSNGMTFGQAMYHVVMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 S +I +Y +A +Y I+ FC + + +S Q + +D Sbjct: 181 SQNTTYIIPMYVIIAVMYFIVC-FC----LSMFASYLQKRFKMD 219 >gi|188534335|ref|YP_001908132.1| glutamine ABC transporter permease protein [Erwinia tasmaniensis Et1/99] gi|188029377|emb|CAO97254.1| Glutamine transport system permease protein [Erwinia tasmaniensis Et1/99] Length = 219 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/220 (29%), Positives = 124/220 (56%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P LL A +TL I+ + V +IIG R + + I Sbjct: 1 MQFDW-SAIWPAIPILLEGA-KMTLLISVLGLVGGVIIGLVAGFARAY-GGWLSRNIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIELIRGTPIVVQVMFIYFALPMAFNDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIN 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +G +A A+GL+ ++T+R++I+P + PL +++I +K TS+ I + E+ + Sbjct: 118 RGFREAGLALGLSGRETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A +YLI+T + ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVIYLIITLVLSFVLRRLERRMK 217 >gi|78186724|ref|YP_374767.1| amino acid ABC transporter permease [Chlorobium luteolum DSM 273] gi|78166626|gb|ABB23724.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Chlorobium luteolum DSM 273] Length = 990 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 116/207 (56%), Gaps = 7/207 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+I ++ +L+ + + VT+ I+ +S + ++G + +R+ + T+ +L ++ + R Sbjct: 771 NIIKENRWKLILSGLRVTVIISVLSALFGTVLGAGVCAMRMSSAKTLKTL-ASVFISLLR 829 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTP+LV L +IFY + + D +I+ LNF+AY++EI RS + SI GQ +A Sbjct: 830 GTPVLVLLMLIFY-VVFASVSIDPVAVAVIAFGLNFAAYVAEIFRSGVESIDNGQREAGI 888 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G TR +T IILPQTI EF+S++K TS+ I + ++ + I S T+ Sbjct: 889 SMGFTRLRTFLLIILPQTIQRILPVYKGEFLSLVKMTSIVGYIAVEDLTKAGDIIRSRTF 948 Query: 187 Q---PLIIYCELAF--VYLILTSFCYI 208 PLI+ L F +L+L S Y+ Sbjct: 949 DAFFPLIMVAILYFSISWLLLQSMAYL 975 >gi|254509082|ref|ZP_05121185.1| ABC-type glutamine transport system, permease component [Vibrio parahaemolyticus 16] gi|219548015|gb|EED25037.1| ABC-type glutamine transport system, permease component [Vibrio parahaemolyticus 16] Length = 246 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/189 (33%), Positives = 108/189 (57%), Gaps = 2/189 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L A T+ ++ +S + ++ IG +A + + I+ I YV I R P+LV L Sbjct: 39 RFLIAGFNDTIQVSLLSMLFAMTIGLLVA-LPALSNSPILKGINRLYVEIIRSIPVLVLL 97 Query: 75 FVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 ++YG+P + + D F A +I+LT+ SA+++E+ R I +I +GQ +A+ ++GL+ Sbjct: 98 LWVYYGMPTLLDVSLDHFWAGVIALTVAESAFMAEVFRGGIQAISRGQHEAAESLGLSYW 157 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q +R +ILPQ PL ++F+ ILK +S+ S I + ++ + A +V Y PL IY Sbjct: 158 QKMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIYT 217 Query: 194 ELAFVYLIL 202 L YL+L Sbjct: 218 FLVLEYLVL 226 >gi|150019589|ref|YP_001311843.1| polar amino acid ABC transporter inner membrane subunit [Clostridium beijerinckii NCIMB 8052] gi|149906054|gb|ABR36887.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium beijerinckii NCIMB 8052] Length = 219 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/154 (39%), Positives = 91/154 (59%), Gaps = 7/154 (4%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRS 112 IS I YV RGTPLLVQ+++I+ GLP IGI I+L LN +AYISEIIR+ Sbjct: 49 ISYIAAAYVEFVRGTPLLVQIYIIYIGLPKLIGIDMPDMTVGSIALALNSAAYISEIIRA 108 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++ KGQ +A+ ++G+ + + H+I+PQ L +EFIS++K +S+ S I + Sbjct: 109 GIEAVDKGQMEAARSLGMNQGLAMVHVIIPQAFKNILPALGNEFISVIKESSMVSVIGVA 168 Query: 173 EIFQTAQRIVSTT---YQPLIIYCELAFVYLILT 203 E+ A + T +P+I+ A VY +LT Sbjct: 169 ELMYNASIVRGNTALGLEPIIV---AAVVYFVLT 199 >gi|323697767|ref|ZP_08109679.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323457699|gb|EGB13564.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 271 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/187 (34%), Positives = 110/187 (58%), Gaps = 2/187 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT I +S V+ L+IG A++R+ S + Y+ + R TPLL+Q+F Sbjct: 68 LMEGLGVTFRITGVSMVLMLVIGLTTALMRMSASWAARG-VARAYMELIRNTPLLIQIFF 126 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 I++ + I + +F + +I+L+L AY SEI R+ I SI KGQW+A+ ++G+ Sbjct: 127 IYFVVAPI-LDISAFRSAVIALSLFEGAYASEIFRAGITSIDKGQWEAAKSLGMGPYAMY 185 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 RHIILPQ + PL+S+ +S++K +++ STI I ++ Q + I + T+ I+ +A Sbjct: 186 RHIILPQAVRRVLPPLTSQAVSLVKDSALVSTIAILDLTQRGRMIDAETFLTFEIWFTVA 245 Query: 197 FVYLILT 203 +YL +T Sbjct: 246 AIYLAVT 252 >gi|254700593|ref|ZP_05162421.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis bv. 5 str. 513] gi|254704963|ref|ZP_05166791.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis bv. 3 str. 686] gi|254707524|ref|ZP_05169352.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella pinnipedialis M163/99/10] gi|254708940|ref|ZP_05170751.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella pinnipedialis B2/94] gi|254713633|ref|ZP_05175444.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella ceti M644/93/1] gi|254716013|ref|ZP_05177824.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella ceti M13/05/1] gi|256030466|ref|ZP_05444080.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella pinnipedialis M292/94/1] gi|256059927|ref|ZP_05450112.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella neotomae 5K33] gi|256158450|ref|ZP_05456348.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella ceti M490/95/1] gi|256253870|ref|ZP_05459406.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella ceti B1/94] gi|260169374|ref|ZP_05756185.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella sp. F5/99] gi|261217780|ref|ZP_05932061.1| polar amino acid ABC transporter [Brucella ceti M13/05/1] gi|261221006|ref|ZP_05935287.1| polar amino acid ABC transporter [Brucella ceti B1/94] gi|261315005|ref|ZP_05954202.1| polar amino acid ABC transporter [Brucella pinnipedialis M163/99/10] gi|261316438|ref|ZP_05955635.1| polar amino acid ABC transporter [Brucella pinnipedialis B2/94] gi|261321372|ref|ZP_05960569.1| polar amino acid ABC transporter [Brucella ceti M644/93/1] gi|261323897|ref|ZP_05963094.1| polar amino acid ABC transporter [Brucella neotomae 5K33] gi|261751101|ref|ZP_05994810.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513] gi|261755663|ref|ZP_05999372.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686] gi|265987508|ref|ZP_06100065.1| polar amino acid ABC transporter [Brucella pinnipedialis M292/94/1] gi|265996966|ref|ZP_06109523.1| polar amino acid ABC transporter [Brucella ceti M490/95/1] gi|260919590|gb|EEX86243.1| polar amino acid ABC transporter [Brucella ceti B1/94] gi|260922869|gb|EEX89437.1| polar amino acid ABC transporter [Brucella ceti M13/05/1] gi|261294062|gb|EEX97558.1| polar amino acid ABC transporter [Brucella ceti M644/93/1] gi|261295661|gb|EEX99157.1| polar amino acid ABC transporter [Brucella pinnipedialis B2/94] gi|261299877|gb|EEY03374.1| polar amino acid ABC transporter [Brucella neotomae 5K33] gi|261304031|gb|EEY07528.1| polar amino acid ABC transporter [Brucella pinnipedialis M163/99/10] gi|261740854|gb|EEY28780.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513] gi|261745416|gb|EEY33342.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686] gi|262551434|gb|EEZ07424.1| polar amino acid ABC transporter [Brucella ceti M490/95/1] gi|264659705|gb|EEZ29966.1| polar amino acid ABC transporter [Brucella pinnipedialis M292/94/1] Length = 219 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 122/209 (58%), Gaps = 12/209 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMHFYVWIFRG 67 +FPQLL AI L I+ I+ +++LI G + ++R I + +I +++ F RG Sbjct: 10 GAFPQLL-PAIGTNLVISIIAMILALIGGTALTILRTLGIAPLNAVIGVVISF----IRG 64 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TP+LVQ+F+ +YGLP +G+ A I+++ N S +I+EI+R + + G +A+ A Sbjct: 65 TPILVQIFLFYYGLPALGLDLSPIQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIA 124 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ K +ILPQ PL +E +I+K T++ S IT+ E+ +TAQ++ + +++ Sbjct: 125 LGIKGKVIWTKVILPQLYIRIMPPLVNELTTIVKGTALLSVITVVEVLRTAQQVANASFR 184 Query: 188 PL-IIYCE---LAFVYLILTSFCYIIQIK 212 PL + C L V L+L+ +++++ Sbjct: 185 PLETLLCAAIILFAVNLVLSQCGRVLEMR 213 >gi|322374410|ref|ZP_08048924.1| amino acid ABC transporter, permease protein [Streptococcus sp. C300] gi|321279910|gb|EFX56949.1| amino acid ABC transporter, permease protein [Streptococcus sp. C300] Length = 229 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/164 (34%), Positives = 92/164 (56%), Gaps = 1/164 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ Y+W+ RGTPLL+QL I+Y LP IGI D A +I+ LN++AY +EI R I + Sbjct: 66 LIDLYIWVMRGTPLLLQLIFIYYVLPSIGIRLDRLPAAVIAFVLNYAAYFAEIFRGGIET 125 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQ++A+ + + T+R+IILPQ + +E +S++K TS+ + I ++ Sbjct: 126 IPKGQYEAAKVLKFSPFDTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLI- 184 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 A R + L+ +YLI+ I+ K+E + + Sbjct: 185 LASRTAANRDASLVPMFLAGAIYLIMIGLVTIVAKKLEKKYSYY 228 >gi|300727963|ref|ZP_07061341.1| ABC-type amino acid transport/signal transduction system [Prevotella bryantii B14] gi|299774805|gb|EFI71419.1| ABC-type amino acid transport/signal transduction system [Prevotella bryantii B14] Length = 496 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 115/209 (55%), Gaps = 15/209 (7%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHFYVWIFRGTPLLVQLFVIFY 79 T+ I + +ISLI+G IA++R ++ + Y+ I RGTP +VQL +I+Y Sbjct: 294 TILITVFAIIISLILGSLIAIVRTSHDRNGNMKFLNTLCRVYLTIVRGTPTMVQLLIIYY 353 Query: 80 GLPHIGIVFDS-----FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 ++F S V I++ LN +AY++E+IRS I+SI +GQ +A ++G++ Q Sbjct: 354 ------VIFASADVSKVVVAIVAFGLNSAAYLAEVIRSGIMSIDRGQMEAGRSLGMSYAQ 407 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 T+R +ILPQ + +E I++LK TS++ I + ++ + + I S TY ++ Sbjct: 408 TMRFVILPQAYKNVLPAIGNELITLLKETSISGYIGLVDLTKGSDIIRSITYDAMLPLGV 467 Query: 195 LAFVYLILTSFCYIIQIKIESSVTQHTYS 223 +A +YL+L +IE + ++ S Sbjct: 468 VALIYLVLVMSLEAGVSRIEKKLRKNERS 496 >gi|296156899|ref|ZP_06839736.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295892785|gb|EFG72566.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 567 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/154 (36%), Positives = 93/154 (60%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+W RGTP L+QL IF LP IG+ FD +I LN +A+ +E+ R+ I+S+ + Sbjct: 94 YIWFVRGTPQLLQLVFIFDALPLIGLRFDEVTTAVIGFALNEAAFSAELFRAGILSVNRS 153 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q A+ A+G+ T+R IILPQ++ L+++ I +LK TS+AS I + E+ +Q+ Sbjct: 154 QSIAAAALGMGPLLTLRRIILPQSMRAVIPGLANDTIGMLKLTSIASVIFVNELTFRSQQ 213 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 +V ++ ++ A +YL LTS ++Q+ +E Sbjct: 214 VVGQNFKFFTVFGAAAVIYLFLTSGISLLQVWLE 247 >gi|295400465|ref|ZP_06810443.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] gi|312112430|ref|YP_003990746.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. Y4.1MC1] gi|294977368|gb|EFG52968.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] gi|311217531|gb|ADP76135.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y4.1MC1] Length = 234 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 120/202 (59%), Gaps = 9/202 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ + PQL+ + VTL I +S V ++IG A+ R+F I+S ++ YV RG Sbjct: 9 LVGEFLPQLV-QYLGVTLQILAVSTVFGIVIGIAAAIPRLF-RIPILSQLVVVYVSFIRG 66 Query: 68 TPLLVQLFVIFYGLPHIGIVFD-------SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 TP+L+QLF+IFYG+P + ++FD ++I+ +L+ A SEI R +I +I G Sbjct: 67 TPILIQLFLIFYGVPALFLLFDIDLTRMDPLYFVMITYSLSNGAVFSEIFRGAIQAIDYG 126 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y++G++ QT II+PQ I + +++ IS LK TS+A TI + ++ + Sbjct: 127 QTEAAYSVGMSDSQTFFRIIIPQAIGIAFPNMANCIISSLKDTSLAFTIGVMDMVGRGET 186 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 ++++T L +Y L+ +Y I+ Sbjct: 187 LIASTAHALEVYISLSIIYYIV 208 >gi|259908983|ref|YP_002649339.1| glutamine ABC transporter permease protein [Erwinia pyrifoliae Ep1/96] gi|224964605|emb|CAX56118.1| Glutamine transport system permease protein [Erwinia pyrifoliae Ep1/96] gi|283478993|emb|CAY74909.1| glutamine ABC transport system, inner membrane component [Erwinia pyrifoliae DSM 12163] Length = 219 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/220 (29%), Positives = 124/220 (56%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P LL A +TL I+ + V +IIG R + + I Sbjct: 1 MQFDW-SAIWPAIPILLEGA-RMTLLISVLGLVGGVIIGLVAGFARAY-GGWLSRNIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIELIRGTPIVVQVMFIYFALPMAFNDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIN 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +G +A A+GL+ ++T+R++I+P + PL +++I +K TS+ I + E+ + Sbjct: 118 RGFREAGLALGLSSRETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A +YLI+T + ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVIYLIITLVLSFVLRRLERRMK 217 >gi|154245547|ref|YP_001416505.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] gi|154159632|gb|ABS66848.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] Length = 227 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 116/205 (56%), Gaps = 3/205 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M YE+ F+ + + +P LL + +TL + S + I+G AV R++ + ++ Sbjct: 1 MGYEFDFSFLNEYWPDLL-NGVWLTLGMTVASVLPGFILGTLCAVGRLYGPPYVQRAVV- 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FYV R TPL++Q+F +F+GL +G F A +I+L +N AY +EI+R+ SIPK Sbjct: 59 FYVEAIRNTPLIIQVFWLFFGLAVLGAKIGPFPAAVIALVVNVGAYTAEIMRAGFRSIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A++ + LT Q + + LPQ + L S+F+ ++ +T++ S I+ E+ A Sbjct: 119 GQIEAAHCLALTPTQALWSVQLPQAVERVYPALVSQFVLMMLATAIMSQISAEELTGVAY 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTS 204 I S T++ +Y +A +YL + S Sbjct: 179 MIQSFTFRGFEVYLVIAVIYLAMAS 203 >gi|229165584|ref|ZP_04293359.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH621] gi|228617891|gb|EEK74941.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH621] Length = 218 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 106/176 (60%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + ++ + S ++G +AV+RI I++ I YV R PL++ F+ ++ LP IGI Sbjct: 25 SVVALIGSFVLGIIMAVMRIS-PIRILNWIGSAYVEFVRNIPLVLIAFIFYFALPVIGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 F+ FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + H++LPQ + Sbjct: 84 FNGFVAGTVALTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQAMYHVVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YL+LT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTKTFVTFDVYIFVGMFYLVLT 199 >gi|158319771|ref|YP_001512278.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus oremlandii OhILAs] gi|158139970|gb|ABW18282.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus oremlandii OhILAs] Length = 266 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 113/213 (53%), Gaps = 10/213 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF------FSDTII 54 M E I + + + VTL I+ ++ +IG ++R F ++ Sbjct: 1 MSLELLIKIFNDYGPMFARGAWVTLYISITGTMVGSVIGLLTGIVRTIPMPDRGFKRVLL 60 Query: 55 SLIMHF---YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEII 110 ++ F Y+ FRGTP++VQ VI+YG+ GI + A +I +++N AY+SEI+ Sbjct: 61 KVVNSFISIYIECFRGTPMIVQAMVIYYGVAQAFGIQMNRTFAALIIVSINTGAYMSEIV 120 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R I+SI KGQ++A+ AIG+ QT+ +++LPQ I +EF+ +K TSV + I+ Sbjct: 121 RGGILSIDKGQFEAAEAIGMNHIQTMINVVLPQVIRNILPATGNEFVINIKDTSVLNVIS 180 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + E+F + I T++ Y + +YL +T Sbjct: 181 VTELFFQTKSISGATFKFFEPYLITSVIYLTMT 213 >gi|319938930|ref|ZP_08013294.1| inner membrane amino-acid ABC transporter permease YecS [Streptococcus anginosus 1_2_62CV] gi|319811980|gb|EFW08246.1| inner membrane amino-acid ABC transporter permease YecS [Streptococcus anginosus 1_2_62CV] Length = 213 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 57/159 (35%), Positives = 92/159 (57%), Gaps = 1/159 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +++ Y+WI RGTPLL+QL I+Y LP+IG+ D A II+ TLN++AY +EI R I+S Sbjct: 50 LINIYIWIMRGTPLLLQLIFIYYVLPNIGVRLDRLPAAIIAFTLNYAAYFAEIFRGGILS 109 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP GQ++A+ + T QTI IILPQ + + +E ++++K TS+ + + ++ Sbjct: 110 IPAGQYEAAKVLKFTPFQTIWFIILPQVVKVVLPSVFNEVMTLVKDTSLVYALGVSDLI- 168 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 A R + L +YL+L I+ ++E Sbjct: 169 LASRTAANRDASLAPMFIAGAIYLVLIGLVTIVSKQVEK 207 >gi|306841171|ref|ZP_07473887.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] gi|306845329|ref|ZP_07477904.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] gi|306274245|gb|EFM56057.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] gi|306288797|gb|EFM60115.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] Length = 220 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/195 (32%), Positives = 109/195 (55%), Gaps = 5/195 (2%) Query: 30 ISFVISLIIGFFIAVIRIF---FSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 + +V+ I G + +I + + + ++ Y+ I RGTP LVQLFV++YG P +G+ Sbjct: 22 LCWVLGTIFGMVLGLIIVLAQRYGPRPLGWLIQAYIEIIRGTPFLVQLFVLYYGGPLVGL 81 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 D+ A ++ LT+ S Y +EI RS +++P+GQ +A+ AIG++ + I+LP ++ Sbjct: 82 RLDALPAGLLGLTIYGSPYFAEIFRSGFLAVPRGQLEAARAIGMSEPTIVWRILLPLSL- 140 Query: 147 TSAVPLSSEFISIL-KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSF 205 SA+P F IL K T + S IT+PE+ QR+ + T++ L LA + L Sbjct: 141 VSALPALVNFSIILTKETVILSIITVPELMYQVQRMSTETFRYLEANLVLALFFWGLVET 200 Query: 206 CYIIQIKIESSVTQH 220 ++E+ +T+H Sbjct: 201 ISRFGRRLETRITKH 215 >gi|126731795|ref|ZP_01747599.1| amino acid ABC transporter, permease protein [Sagittula stellata E-37] gi|126707622|gb|EBA06684.1| amino acid ABC transporter, permease protein [Sagittula stellata E-37] Length = 231 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/224 (29%), Positives = 118/224 (52%), Gaps = 13/224 (5%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 +D F LL + +TL +A S +L+ G A+ ++F + +++ Y RG P Sbjct: 4 LDGFGWLLIDGLKLTLFVAIASMAGALVFGLLAAIGKLF-APRPARILIDTYTTFVRGVP 62 Query: 70 LLVQLFVIFYGLP------------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 LV L +I+YG+P I + + FVA I +LTL ++A+ E+ R++ ++ Sbjct: 63 ELVLLLIIYYGVPTLVQNVSRDLGVPITLSINPFVAGIGTLTLIYAAFACEVYRAAYAAV 122 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +A+YA+GL+R T R + LPQ + + L + ++ ++K+T++ S I +PE+ + Sbjct: 123 PVGQREAAYALGLSRAVTFRKVELPQMMRYALPGLGNVWMVVVKATALISIIQLPELMRN 182 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 A +T QP + +YL +T+ Q ++E + T Sbjct: 183 ADIAARSTRQPFTFFFAACLLYLAITAISMWGQGRLERWAARGT 226 >gi|237797982|ref|ZP_04586443.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020833|gb|EGI00890.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 215 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 53/151 (35%), Positives = 94/151 (62%), Gaps = 3/151 (1%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + Y+ +F+GTPLL+QLF++F+G+ +G+ + A ++LTL SAY++EI R + S Sbjct: 51 MAKLYIELFQGTPLLMQLFLVFFGVALMGLNISPWAAAALALTLFTSAYLAEIWRGCVES 110 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I KGQW+AS ++ ++ + +R++ILPQ + + P + ++K T+V S I E+ + Sbjct: 111 ISKGQWEASASLAMSPLEQMRYVILPQALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTK 170 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 T + + T++P ++Y +A Y IL CY Sbjct: 171 TGSMLANATFEPFMVYGFVALGYFIL---CY 198 >gi|167589679|ref|ZP_02382067.1| glutamine ABC transporter permease protein [Burkholderia ubonensis Bu] Length = 218 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 118/211 (55%), Gaps = 16/211 (7%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACIS----FVISLIIGFFIAVIRIFFSDTIISL 56 M ++W + I + P L+ + +T+ IA FV+ +I G F A + +++ Sbjct: 1 MNFDW-SAIWAALPDLM-DGVRLTVFIALFGLLGGFVVGMIAGMFRA-----YGPKAMNV 53 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + Y+ + RGTP++VQ+ +++ LP HI I D A II++T+N AY++E++R + Sbjct: 54 LAQVYIELIRGTPIVVQVMFLYFALPLLAHIRI--DGLTAAIIAITVNSGAYLAEVVRGA 111 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++SIPKG +A A+GL+ + + ++ P PL ++ I LK TS+ I + E Sbjct: 112 LLSIPKGLTEAGLAMGLSMPRVLLKVVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGE 171 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 + + Q I++ +Q + I+ +A +YL+LT Sbjct: 172 LTRKGQEIIAGNFQAVEIWTAVAVIYLMLTG 202 >gi|330984830|gb|EGH82933.1| putative ABC transporter ATP-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 420 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 133/232 (57%), Gaps = 17/232 (7%) Query: 1 MKYEW---FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI 57 M ++W F L D+ + A + ++ +++VIS+++GF +A+ + S +I+L Sbjct: 1 MTFDWKYMFGLFSDTE---FWMATWTVIQLSVLTWVISIVLGFVLALAKQS-SLPLINLP 56 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRS 112 Y+W+FR PLLV L + Y LP ++ + F A +I++ + +AY++EI R Sbjct: 57 AKAYIWLFRSLPLLV-LLIFVYNLPQAVPATSAVLANPFWAGLIAMVMCETAYVAEIHRG 115 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 ++SI KGQ +A+ A+GL T I++PQ + + L++E+ISI+K +S+ S I++ Sbjct: 116 GLLSIAKGQTEAARALGLRFVGTQWRIVIPQALRVALPSLTNEYISIVKLSSLVSVISLT 175 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVY-LILTSFCYIIQIKIES--SVTQHT 221 EI QR+ S + + +AF Y LI+T F ++++ ++E VTQH Sbjct: 176 EILMVGQRLYSQNFLVMETMAAVAFYYVLIVTVFDFLLK-RLERYLDVTQHK 226 >gi|293602767|ref|ZP_06685207.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292818783|gb|EFF77824.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 218 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 103/182 (56%), Gaps = 3/182 (1%) Query: 39 GFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII 95 G + V+ + + ++L+ Y+ +F+GTPLL+QLF+ F+GL +G+ ++A Sbjct: 31 GALMGVLALMMRTSRVALMRRVSWAYIELFQGTPLLMQLFLAFFGLSLLGVEVPPWLAAG 90 Query: 96 ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSE 155 +LTL A+++EI R + +IPKGQW+AS ++ L Q +R+++LPQ + + P Sbjct: 91 AALTLWSGAFLAEIWRGCVEAIPKGQWEASASLALGYVQQMRYVVLPQALRIAIAPTVGF 150 Query: 156 FISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + I+KST++ S I E+ + + I + T+ P +Y A +Y L + +++E Sbjct: 151 AVQIVKSTALTSIIGFTELSKASTVITNATFSPFTVYACAALIYFALCWPLSRLSLRLER 210 Query: 216 SV 217 + Sbjct: 211 KL 212 >gi|229010072|ref|ZP_04167286.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides DSM 2048] gi|228751205|gb|EEM01017.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides DSM 2048] Length = 218 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 106/176 (60%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + ++ + S ++G +AV+RI I++ I YV R PL++ F+ ++ LP IGI Sbjct: 25 SVVALIGSFVLGIVMAVMRIS-PIRILNWIGSAYVEFVRNIPLVLIAFIFYFALPVIGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 F+ FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + H++LPQ + Sbjct: 84 FNGFVAGTVALTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQAMYHVVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YL+LT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTKTFVTFDVYIFVGMFYLVLT 199 >gi|306821309|ref|ZP_07454919.1| polar amino acid ABC superfamily ATP binding cassette transporter permease [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550650|gb|EFM38631.1| polar amino acid ABC superfamily ATP binding cassette transporter permease [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 204 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/186 (32%), Positives = 112/186 (60%), Gaps = 8/186 (4%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ +S ++ ++IG +A R+ + I++LI Y+ + RGTPLL Q+ ++ +GL Sbjct: 3 TIGLSLVSVLMGILIGLVLAFFRLSKAK-ILNLISTTYIELIRGTPLLAQIMLVKFGLYD 61 Query: 84 IGIVFDSFVAI------IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 + I + ++I II+++LN AY+ EIIRS I S+ KGQ +A ++G+++ T+R Sbjct: 62 L-ITAKTKISIPDIAIGIIAVSLNSGAYVCEIIRSGISSVDKGQMEAGRSLGMSKSMTMR 120 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 I+LP + L +EF++++K TS+ S I + ++F A + S TY+ +A Sbjct: 121 LIVLPLAVKNILPALCNEFVTVIKETSIISYIGVTDLFYIANAVSSMTYKSFESMLAVAL 180 Query: 198 VYLILT 203 +Y I+T Sbjct: 181 IYFIIT 186 >gi|260768889|ref|ZP_05877823.1| histidine ABC transporter permease protein HisM [Vibrio furnissii CIP 102972] gi|260616919|gb|EEX42104.1| histidine ABC transporter permease protein HisM [Vibrio furnissii CIP 102972] gi|315180583|gb|ADT87497.1| ABC-type arginine/histidine transport system, permease component [Vibrio furnissii NCTC 11218] Length = 225 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 10/210 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LII S P + ++ + T+ + ++ VI L I +A+ R + IS Y++ F Sbjct: 3 FSLIIGSLP-IYFSGLWTTVWLVGVALVIGLSIAIPLAIARNS-RNYAISTPAWAYIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ ++S LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQFFPVKDTLWENAWFCALVSFVLNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G++ +T R ++LP + + S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMSTWKTYRRVVLPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILTS---FCY 207 + S Y P + Y+ LT FC+ Sbjct: 181 VNSRYYAPFESFLTAGLFYMSLTFIIIFCF 210 >gi|329666943|gb|AEB92891.1| glutamine ABC transporter permease component [Lactobacillus johnsonii DPC 6026] Length = 216 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 116/200 (58%), Gaps = 8/200 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W N I Q L+ I V+L +SFV+ L+ GF I ++I + +S I+ F + Sbjct: 8 YSWIN--IRFLLQGLWVTIYVSLISIALSFVLGLVFGF-IRYVKIKY----LSAIVGFVI 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP +GI+ + VA II+L + A ++EI+RS I ++ GQ Sbjct: 61 DIIRNLPLLLIIFFTYFGLPELGIITNPTVASIIALVVFEGAMLAEIVRSGIAAVDPGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + G+T Q + H+I+PQ + L S+F+S++K TS+A+ I +PE+ AQ I Sbjct: 121 EGARSNGMTYMQAMYHVIIPQALNKMIPSLLSQFVSLVKDTSLATIIVLPELLFHAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLI 201 S LI +Y +A +Y I Sbjct: 181 SQNTTYLIPMYVIIAIMYFI 200 >gi|305663951|ref|YP_003860239.1| polar amino acid ABC transporter, inner membrane subunit [Ignisphaera aggregans DSM 17230] gi|304378520|gb|ADM28359.1| polar amino acid ABC transporter, inner membrane subunit [Ignisphaera aggregans DSM 17230] Length = 224 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/189 (34%), Positives = 109/189 (57%), Gaps = 4/189 (2%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + IV TL ++ F+++ ++G + I I+ IISLI+ + + I RG PL++ LF+IF Sbjct: 21 SGIVNTLILSITGFILATVLGLIFSFIEIY-GPNIISLIIDWMLRIIRGIPLVLMLFIIF 79 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 YGLP +GI F V+ I+ + + SAY +++ R II++ + Q +A+Y+IGL+ R+ Sbjct: 80 YGLPQLGIRFSPIVSAILGIGIIDSAYQAQLFRGIIITVSERQLEAAYSIGLSTWNAFRY 139 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 I++PQ + +EF +LK +S+A I + EIF A + + T L L FV Sbjct: 140 IVIPQAFRIALPAWINEFSIVLKDSSMAYAIGVTEIFTQAIHVANATMDYL---TPLVFV 196 Query: 199 YLILTSFCY 207 +I CY Sbjct: 197 SIIYFLICY 205 >gi|295099754|emb|CBK88843.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Eubacterium cylindroides T2-87] Length = 238 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 120/211 (56%), Gaps = 19/211 (9%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 +VT+ +A ++ ++ I+G +A++ +++ I Y + RGTP+L+QL++ YG Sbjct: 28 IVTIVLALMTVILGCILGL-LAILMKRSHIKVLNAISTAYTQVIRGTPMLLQLYIWLYGF 86 Query: 82 PHIGI----------VFDS--FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 P IGI V+ S F+ +++L +N AYI E++R + SI KGQ +A ++G Sbjct: 87 PMIGISIPSIPMLGSVYGSREFLTAVVALAINSGAYICELLRGGLDSIDKGQMEAGRSLG 146 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY--- 186 + +T+R+II+PQ I L +EFI ++K +S+ S + + +I T+ + ++TY Sbjct: 147 FSNLETMRYIIVPQAIRVVLPGLCNEFIMMIKESSIVSVVGVFDIMYTSNIVKASTYSVF 206 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +PLII +A +Y LTS I IE + Sbjct: 207 EPLII---IAIIYFALTSVLTTIMSLIERKL 234 >gi|325836786|ref|ZP_08166253.1| ABC transporter, permease protein [Turicibacter sp. HGF1] gi|325491164|gb|EGC93453.1| ABC transporter, permease protein [Turicibacter sp. HGF1] Length = 219 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 103/178 (57%), Gaps = 1/178 (0%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I ++ + A +T+ IA + ++S ++GF +IR ++ I+ ++ Y+ + R TP Sbjct: 6 IKTYAPMYVEAAKLTMSIALLGILLSTLVGFICCLIR-YYKIPILQRVIGMYIELSRNTP 64 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+QLF +++GLP +GI S+ ++ LT +Y++E RS + SIP Q ++ ++G Sbjct: 65 LLIQLFFLYFGLPKLGIFLSSYACGVLGLTFLGGSYMAEAFRSGLESIPDIQMESGLSLG 124 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 LT+ Q + +II PQ + S S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 125 LTKWQVLCYIIFPQAVAVSLPAFSANVIFLIKETSVFSVVALADLMYVAKGLIGLYYK 182 >gi|315604136|ref|ZP_07879202.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315313842|gb|EFU61893.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 320 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/189 (34%), Positives = 100/189 (52%), Gaps = 25/189 (13%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLF----------VIFYGLPHIG------IVFDS---- 90 + ++ + Y+W FRGTP+ QL + +G+P +G I FD+ Sbjct: 92 NPVLRWVAMAYIWFFRGTPIYTQLIFWSLLPTLYPTLSFGVPFLGSLWGWEIPFDTATYF 151 Query: 91 --FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 F I L LN AY++EI+R+ ++S+PKGQW+A+ A+G+ R R IILPQ + Sbjct: 152 TPFWMAFIGLGLNEGAYLAEIMRAGLLSVPKGQWEAATALGMPRATIFRRIILPQAMRVI 211 Query: 149 AVPLSSEFISILKSTSVASTI--TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFC 206 P+ +E IS+LK+TS+ S I T+ F QR T+ P+ + A YL++TS Sbjct: 212 VPPIGNETISMLKTTSLVSAIPFTLELTFIARQR-GQATFAPVPLLIAAAIWYLVITSLL 270 Query: 207 YIIQIKIES 215 IQ IE Sbjct: 271 MWIQSFIEK 279 >gi|300705160|ref|YP_003746763.1| glutamate/aspartate ABC transporter membrane component [Ralstonia solanacearum CFBP2957] gi|299072824|emb|CBJ44180.1| glutamate/aspartate transport protein; ABC superfamily, membrane component [Ralstonia solanacearum CFBP2957] Length = 242 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 111/197 (56%), Gaps = 11/197 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + T+ + S++I+L++G + V+R + ++S + YV +FR PL+VQLF+ Sbjct: 24 LLSGLKTTIALGLSSWIIALVLGSVLGVLRTV-PNKVLSGLATAYVELFRNIPLIVQLFI 82 Query: 77 IFYGLPHIGIVFD----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 ++ +P + D F+ ++ L +A + E +RS I S+P+GQ +A Sbjct: 83 WYFVMPELVPGGDYIKQMNPTTAMFLCAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGL 142 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G T QT RHI+LP PL+SEF++I K+++VASTI + E+ +++V T Sbjct: 143 AMGFTLAQTYRHIMLPMAFRIIVPPLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTA 202 Query: 187 QPLIIYCELAFVYLILT 203 QP + + +Y+++ Sbjct: 203 QPYESFIAVTLMYMLIN 219 >gi|227488107|ref|ZP_03918423.1| ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227541504|ref|ZP_03971553.1| ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227091969|gb|EEI27281.1| ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227182786|gb|EEI63758.1| ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 299 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 120/210 (57%), Gaps = 23/210 (10%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-- 81 T+ + I+ VI +++G +AV+R+ + ++S + Y+WIFRGTP+ VQL +F+GL Sbjct: 62 TIALTIIAMVIGVVLGAILAVLRMS-PNPVLSGLSWIYLWIFRGTPIYVQL--VFWGLLG 118 Query: 82 -------------PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G + + F+ + L LN +AY++E++R+ + ++P+GQ++AS A+ Sbjct: 119 SIYQTINLGFAEFDLQGFLSNMFLLACLGLGLNEAAYMAEVVRAGLQAVPEGQYEASKAL 178 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP---EIFQTAQRIVSTT 185 G++ QT++ +LPQ + P +E IS+LK+TS+ + +P E++ A I + Sbjct: 179 GMSWWQTMKRTVLPQAMRIIIPPTGNELISMLKTTSL--VVAVPYTYELYGKATDISYSL 236 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIES 215 ++P+ + A Y+ +TS I Q +E Sbjct: 237 FEPVPLLLVAATWYIAITSVLMIAQSYLEK 266 >gi|154244132|ref|YP_001415090.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] gi|154158217|gb|ABS65433.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] Length = 227 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/183 (32%), Positives = 110/183 (60%), Gaps = 5/183 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFYVWIFRGTPLLVQLFVIFYG 80 +TL ++ ++ V+ ++G A+ R SD + ++ YV + R TPLLVQ+F+I++G Sbjct: 23 LTLQLSFVATVLGFVLGTLCAIGR---SDGAPWVKALVACYVEVIRNTPLLVQIFIIYFG 79 Query: 81 LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 + +G+ D+ VA +++L +N AY SEI+R+ + SI K Q +A+ +GL+R QT H+I Sbjct: 80 IATLGLHVDANVAAVLALVVNVGAYTSEIVRAGLESIHKSQLEAAECLGLSRPQTYWHVI 139 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 + I L+S+++ ++ ++S+ S I+ E+ A RI S T++ Y + +YL Sbjct: 140 VRPAIERVYPALTSQYVLLMLASSITSQISAEELTAVANRIQSDTFRSFETYIVVGVLYL 199 Query: 201 ILT 203 L+ Sbjct: 200 ALS 202 >gi|322372532|ref|ZP_08047068.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus sp. C150] gi|321277574|gb|EFX54643.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus sp. C150] Length = 226 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/211 (34%), Positives = 120/211 (56%), Gaps = 11/211 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 Y +V + C+ F I+G +++I+ + ++ YVW+FRGTP++VQ+ + Sbjct: 15 YGVLVTIMISVCVVF-FGTILGVLVSLIK-RSGIKPLEWLVSLYVWVFRGTPMVVQIMIA 72 Query: 78 F----YGLPHI--GIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 F LP + GI+ V II L+LN AYISE +R+ I SIPKGQ +A+Y++ Sbjct: 73 FNLIHMNLPTVQFGILNLDLSRIVPGIIVLSLNSGAYISESVRAGIESIPKGQVEAAYSL 132 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+ T+R+++LPQ I L +EF++I+K +S+ TI + E++ AQ + +TTY Sbjct: 133 GIRPWNTMRYVVLPQAIKNILPALGNEFVTIIKDSSLLQTIGVMELWNGAQTVATTTYLT 192 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 L AF YLI+T+ + ++E + + Sbjct: 193 LTPLLFAAFYYLIVTTAMTALLKQMEKRLGE 223 >gi|170691879|ref|ZP_02883043.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170143163|gb|EDT11327.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 245 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 111/199 (55%), Gaps = 13/199 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ +V T+ + ++F ++L +G V+R + + YV IFRG PL+VQ F+ Sbjct: 26 LFSGLVNTVELTLLAFSVALAMGTVFGVMRTL-PNRAANAASAAYVSIFRGVPLIVQFFI 84 Query: 77 IFYGLPHI-----GIVFDSF-------VAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 F+ +P + G F S +A ++SL + + I E +R+ I + P GQ+ A Sbjct: 85 WFFVVPEVLPTAAGDWFKSLPSHPQFLIASVVSLGVYTGSRICEQVRAGIQARPVGQFHA 144 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++A+GLTR Q RH++LP T PL+SEF+ I K+++VASTI + E+ A+++V Sbjct: 145 AFALGLTRAQAYRHVLLPVAFRTILGPLTSEFLIISKNSAVASTIGLLELSGQARQLVDY 204 Query: 185 TYQPLIIYCELAFVYLILT 203 T QP + + Y+ L Sbjct: 205 TAQPYESFICVTLAYMALN 223 >gi|323529955|ref|YP_004232107.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323386957|gb|ADX59047.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 248 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 106/191 (55%), Gaps = 1/191 (0%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 + +L I VTL + +S ++ ++G A + + ++ YV + R TP +V Sbjct: 13 YAGMLARGIAVTLALTAVSTLLGGLVGIAGASVAVA-GPRWARWVVASYVELIRNTPFIV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF +F+GLP +GI D A I+++T+N AY EI+R+ I SI +GQ A+ A+GL Sbjct: 72 QLFFVFFGLPSLGIHIDEIQAAILAMTVNLGAYAIEIVRAGIDSISRGQVQAAQALGLHG 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +Q R+I+LPQ + L S+ + ++ ++V S I++P++ A I S ++ Y Sbjct: 132 RQVFRYIVLPQALANVFPALLSQVLIVMLGSAVVSQISVPDLTYAANFIQSRNFRSFESY 191 Query: 193 CELAFVYLILT 203 + YL+L+ Sbjct: 192 VIITATYLLLS 202 >gi|110632402|ref|YP_672610.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110283386|gb|ABG61445.1| amino acid ABC transporter membrane protein, PAAT family [Chelativorans sp. BNC1] Length = 309 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 123/233 (52%), Gaps = 25/233 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F Q + + +TL ++ +S + ++ G IA++R+ D ++S ++W FR PLLV Sbjct: 69 FHQNILDGLKITLGLSVVSMALGILFGLVIALMRMS-PDRLLSGFAAGFLWFFRAVPLLV 127 Query: 73 QLFVIFYGL--------------PHIGI-----VFDSFVAIIISLTLNFSAYISEIIRSS 113 QL + +Y L P +G + A II L L+ +AY++EIIR Sbjct: 128 QL-IFWYNLSALFPEVKISIPFGPELGAWETNSLISPLTAAIIGLALHEAAYMAEIIRGG 186 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++S+ +GQ +A+ A G++R + +R +ILPQ + P ++FIS++K+TS+ S I + + Sbjct: 187 LLSVDRGQIEATQAFGMSRARALRRVILPQAMRFIVPPSGNQFISMVKATSLVSVIAMSD 246 Query: 174 IFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 + + Q I + T++ PL++ A YL + S + Q +E + V Sbjct: 247 LLYSVQAIYNRTFEVIPLLLVA--AAWYLFIVSLLNVGQEFLERHFGRSERGV 297 >gi|306829413|ref|ZP_07462603.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] gi|304428499|gb|EFM31589.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] Length = 213 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 113/209 (54%), Gaps = 5/209 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRG 67 I + P LL A +T+ + + + S+ +G IA ++I + + ++ Y+W+ RG Sbjct: 4 IFEILPSLLNGA-SMTIQVFALVLIFSIPLGIIIAFALQIHWKP--LHYLIDLYIWVMRG 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL I+Y LP IGI D A +I+ LN++AY +EI R I +IPKGQ++A+ Sbjct: 61 TPLLLQLIFIYYVLPSIGIRLDRLPAAVIAFVLNYAAYFAEIFRGGIETIPKGQYEAAKV 120 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 + + T+R+IILPQ + +E +S++K TS+ + I ++ A R + Sbjct: 121 LKFSPVATVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLI-LASRTAANRDA 179 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESS 216 L+ +YLI+ I+ K+E Sbjct: 180 NLVPMFLAGAIYLIMIGLVTIVAKKLEKK 208 >gi|256847113|ref|ZP_05552559.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus coleohominis 101-4-CHN] gi|256715777|gb|EEU30752.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus coleohominis 101-4-CHN] Length = 236 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 1/165 (0%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL ++ + V SLI+G ++++R +F IIS I+ YV + R TPLL+QLF ++YG P Sbjct: 36 LTLWLSFVGIVGSLIVGVLVSLVR-YFKIPIISKILGAYVEVGRNTPLLIQLFFLYYGFP 94 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 +G+ + + II L AY++E I K Q DA A+G+ + + R+++LP Sbjct: 95 VLGMKLSAEASGIIGLIFLGGAYMAEGFTGGFNGIGKSQIDAGLALGMNQWELARYVVLP 154 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 Q + S LS+ I ++K TS+ S I IPE+ TA ++ Y+ Sbjct: 155 QGLALSVPALSANVIFLIKETSIFSVIAIPELTNTALDLIGMYYR 199 >gi|239833264|ref|ZP_04681592.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239821327|gb|EEQ92896.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 225 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/189 (33%), Positives = 102/189 (53%), Gaps = 1/189 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 +L + +T +A I+ V IIG A+ R ++ + YV R TP LVQ+ Sbjct: 13 HMLVDGMALTAQLALITTVTGFIIGTACAIARRS-GGPVLRRLATAYVESIRNTPFLVQI 71 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 FVI++GL +G F + +++LT+N AY +EI+R+ SI +GQW+A +GL+ Q Sbjct: 72 FVIYFGLSSLGYSFGAIFVAVVALTVNVGAYTAEIMRAGFDSIQEGQWEAGECLGLSSTQ 131 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 H+ L + L+S+FI ++ ++SV S I+ E+ I S TY+P Y Sbjct: 132 LYWHVGLRPAMERVYPALTSQFILLMLASSVTSQISAEELTAAGNFIQSETYRPFETYLV 191 Query: 195 LAFVYLILT 203 +A +YL L+ Sbjct: 192 IAVIYLFLS 200 >gi|16079798|ref|NP_390622.1| glutamine ABC transporter permease [Bacillus subtilis subsp. subtilis str. 168] gi|221310681|ref|ZP_03592528.1| glutamine ABC transporter (integral membrane protein) [Bacillus subtilis subsp. subtilis str. 168] gi|221315004|ref|ZP_03596809.1| glutamine ABC transporter (integral membrane protein) [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319925|ref|ZP_03601219.1| glutamine ABC transporter (integral membrane protein) [Bacillus subtilis subsp. subtilis str. JH642] gi|221324206|ref|ZP_03605500.1| glutamine ABC transporter (integral membrane protein) [Bacillus subtilis subsp. subtilis str. SMY] gi|81815748|sp|O34671|GLNM_BACSU RecName: Full=Probable glutamine ABC transporter permease protein glnM gi|2635190|emb|CAB14686.1| glutamine ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] gi|28375454|emb|CAA93319.1| integral membrane protein [Bacillus subtilis subsp. subtilis str. 168] Length = 216 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 114/204 (55%), Gaps = 15/204 (7%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI---ISLIMH 59 ++ F++ +D F L A++ I+ S ++G +AV+RI T+ + + Sbjct: 7 FDNFSMYMDGFYHTLLASV--------IALAGSFVLGVAVAVMRI----TVFKPLQWLGT 54 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV R PLL+ FV ++GLP+ G+ D F A ++LT+ SA+I+E IR+ I S+ K Sbjct: 55 AYVEFIRNIPLLLITFVFYFGLPNAGLRLDGFQAGTVALTIYTSAFIAEAIRAGIQSVSK 114 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ + G T Q + HIILPQ I PL ++F++++K++S+ + ++ A Sbjct: 115 GQMEAARSSGFTYSQAMLHIILPQAIKIVIPPLGNQFLNLVKNSSILGVVAGLDLMYQAD 174 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 + S+T +Y +A YL+LT Sbjct: 175 LVSSSTLVVFDVYIFVALFYLVLT 198 >gi|187929866|ref|YP_001900353.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12J] gi|187726756|gb|ACD27921.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12J] Length = 222 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/196 (36%), Positives = 125/196 (63%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 +VT+ + + V+ ++G I + R+ +I I YV RGTPLLVQLF++F+GL Sbjct: 20 IVTVEVTAAALVLGCVLGLLIGIGRLNPRRRLIYGICTVYVTFIRGTPLLVQLFLLFFGL 79 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 P I+ +FV ++ L + AY+SEI+R +I S+ +GQ +A+ +IG++ Q++R IIL Sbjct: 80 PQFDILLPAFVCGVLGLGVYSGAYVSEIVRGAIQSVDRGQMEAARSIGMSSAQSMRAIIL 139 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ + PL +EFI+++K++++ S +TI ++ Q+I+S +Y+ L +Y +A VYL+ Sbjct: 140 PQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLEVYLAIALVYLV 199 Query: 202 LTSFCYIIQIKIESSV 217 LTS + ++E ++ Sbjct: 200 LTSAASYLLHRLERNI 215 >gi|163938564|ref|YP_001643448.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] gi|229131584|ref|ZP_04260467.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST196] gi|163860761|gb|ABY41820.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] gi|228651875|gb|EEL07829.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST196] Length = 218 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 106/176 (60%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + ++ + S ++G +AV+RI I++ I YV R PL++ F+ ++ LP IGI Sbjct: 25 SVVALIGSFVLGIVMAVMRIS-PIRILNWIGSAYVEFVRNIPLVLIAFIFYFALPVIGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 F+ FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + H++LPQ + Sbjct: 84 FNGFVAGTVALTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQAMYHVVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YL+LT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTKTFVTFDVYIFVGMFYLVLT 199 >gi|300692511|ref|YP_003753506.1| glutamate/aspartate transport protein; ABC superfamily, membrane component [Ralstonia solanacearum PSI07] gi|299079571|emb|CBJ52249.1| glutamate/aspartate transport protein; ABC superfamily, membrane component [Ralstonia solanacearum PSI07] Length = 242 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 111/197 (56%), Gaps = 11/197 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + T+ + S++I+LI+G + V+R + ++S + YV +FR PL+VQLF+ Sbjct: 24 LLSGLKTTIALGLSSWIIALILGSVLGVLRTV-PNKLLSGLATAYVELFRNIPLIVQLFI 82 Query: 77 IFYGLPHIGIVFD----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 ++ +P + D F+ ++ L +A + E +RS I S+P+GQ +A Sbjct: 83 WYFVMPELVPGGDYIKQMNPATAMFLCAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGL 142 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G T QT RH++LP PL+SEF++I K+++VASTI + E+ +++V T Sbjct: 143 AMGFTLAQTYRHVMLPMAFRIIVPPLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTA 202 Query: 187 QPLIIYCELAFVYLILT 203 QP + + +Y+++ Sbjct: 203 QPYESFIAVTLMYMLIN 219 >gi|28377716|ref|NP_784608.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|254555901|ref|YP_003062318.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum JDM1] gi|300767695|ref|ZP_07077605.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308179878|ref|YP_003924006.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28270549|emb|CAD63453.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|254044828|gb|ACT61621.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum JDM1] gi|300494680|gb|EFK29838.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045369|gb|ADN97912.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 217 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 119/210 (56%), Gaps = 11/210 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W N+ + L + VT+ ++ +S + S IIG + V+R + +S ++ F V Sbjct: 8 YSWINI------RFLLEGLWVTVEVSVVSIIASFIIGSVLGVLR-YVKIKYLSAVVGFVV 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PL++ +F ++GLPH+G A I+++T+ SA ++EIIRS I+++ GQ Sbjct: 61 DIIRNLPLILIIFFTYFGLPHLGFKPGIIFAAILAMTIFESAMLAEIIRSGILAVDYGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + A G++ Q + HI+ PQ I + + S+FIS++K TS+A+ I +PE+ AQ I Sbjct: 121 EGARANGMSYVQALWHIVFPQAIKKTIPTIVSQFISLIKDTSLATIIVLPELLNHAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLILTSFCYIIQI 211 ++ ++ +A +Y I+ CY + I Sbjct: 181 GQNSAYILPMFLMIAVMYFII---CYALSI 207 >gi|330811618|ref|YP_004356080.1| ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379726|gb|AEA71076.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 218 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 104/178 (58%), Gaps = 8/178 (4%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMHFYVWIFRGTP 69 P LL A++ T+ I I F+I++++G F+A+ R F+ + ++ F R TP Sbjct: 13 LPDLLRASLN-TVGITLIGFLIAIVLGLFLAIGRRSRKFWLSWPATAVIEF----IRSTP 67 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+Q++ ++Y LP+ G+ + I+ + L+++ YI+E+ RS + ++P+ QW+A A+ Sbjct: 68 LLIQVYFLYYVLPNYGLSLTAMQVGILGIGLHYACYIAEVYRSGLDAVPRAQWEAVTALN 127 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 + R+IILPQ + PL + +++LK T V S IT+ EI Q A+ I S ++ Sbjct: 128 IAPYDAYRNIILPQALRPIVPPLGNYLVAMLKDTPVLSAITVVEIMQQAKNIGSENFR 185 >gi|296158680|ref|ZP_06841510.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295891248|gb|EFG71036.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 224 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/195 (33%), Positives = 106/195 (54%), Gaps = 3/195 (1%) Query: 11 DSFPQLLYAAI--VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 D QL Y A V+TL IA +SF + +IG A+ ++ + + YV + T Sbjct: 9 DVLRQLPYLATGAVLTLEIAFVSFWLGCLIGLAGALGKLH-GGALTRRAIGLYVVVLTNT 67 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P LVQ+F +FY LP GI A++I LTLN AY+++I+RS I S+ + + + + Sbjct: 68 PALVQIFFLFYALPDAGITLSPMAAVLIGLTLNSGAYLTDILRSGISSVRTSELETAETL 127 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G++R QT+R++ILP T PL + FI ++ +S+ S + E+ A I S + Sbjct: 128 GMSRLQTVRYVILPHVAKTIYAPLCNFFIWLVLGSSIGSIFGVEELTGRAINISSANMRT 187 Query: 189 LIIYCELAFVYLILT 203 + + +A +Y+ LT Sbjct: 188 IETFSVVAAMYVALT 202 >gi|237739680|ref|ZP_04570161.1| amino acid transport system permease [Fusobacterium sp. 2_1_31] gi|262066638|ref|ZP_06026250.1| amino acid ABC transporter, permease/substrate-binding protein [Fusobacterium periodonticum ATCC 33693] gi|294783187|ref|ZP_06748511.1| amino acid ABC transporter, permease/substrate-binding protein [Fusobacterium sp. 1_1_41FAA] gi|229423288|gb|EEO38335.1| amino acid transport system permease [Fusobacterium sp. 2_1_31] gi|291379661|gb|EFE87179.1| amino acid ABC transporter, permease/substrate-binding protein [Fusobacterium periodonticum ATCC 33693] gi|294480065|gb|EFG27842.1| amino acid ABC transporter, permease/substrate-binding protein [Fusobacterium sp. 1_1_41FAA] Length = 236 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/166 (37%), Positives = 100/166 (60%), Gaps = 3/166 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII--ISLTLNFSAYISEIIR 111 +S I + Y+ + RGTP++VQL +I L +G + ++ + +I I+ LN AY++EIIR Sbjct: 68 LSKIAYIYIDVIRGTPVVVQL-MILANLIFVGALRETPILVIGGIAFGLNSGAYVAEIIR 126 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + I + KGQ +A A+GL+ QT+R II+PQ I L SEFI++LK TS+ I Sbjct: 127 AGIEGLDKGQMEAGRALGLSYSQTMRKIIVPQAIKNILPALVSEFITLLKETSIIGFIGG 186 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 ++ ++A I S TY+ + + F+YLILTS + K+E + Sbjct: 187 IDLLRSASIITSQTYRGVEPLLAVGFIYLILTSIFTVFMRKVERGL 232 >gi|153010819|ref|YP_001372033.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151562707|gb|ABS16204.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 218 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 125/211 (59%), Gaps = 5/211 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I+ + +LL I TL IA S ++S G A++ + + + ++ + F++W+F GT Sbjct: 7 IVPPYTELLMTGIWWTLIIAVSSSIVSFFGGIAFALL-VLYGNWLVRYPVRFFIWLFMGT 65 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF+++YGL IGI + II L L+F+ Y S+I R++I+++ GQ + + ++ Sbjct: 66 PLLLQLFLLYYGLSQIGINIPAVWTGIIGLGLHFAVYNSDIFRTAILTVDPGQNEGARSL 125 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G QT+R+II+PQ + + + + I++LK T++ S I I E+ +Q+ +S TY P Sbjct: 126 GFGNGQTLRYIIVPQAVRNALPQVGNNLIALLKDTALVSVIGITELVHASQQAISETYSP 185 Query: 189 LIIYCELAFVY----LILTSFCYIIQIKIES 215 Y A ++ LIL + + ++ K+E+ Sbjct: 186 FEFYITAAVIFYVLNLILEAGLHWMEKKVEA 216 >gi|119025595|ref|YP_909440.1| glutamine ABC transporter (binding and transport protein) [Bifidobacterium adolescentis ATCC 15703] gi|118765179|dbj|BAF39358.1| similar to glutamine ABC transporter (binding and transport protein) [Bifidobacterium adolescentis ATCC 15703] Length = 501 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 123/218 (56%), Gaps = 7/218 (3%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K + L+ S P LL + TL I +SF I+L++G ++++ S I + + + Y Sbjct: 285 KVGFLGLVKQSMPALL-TGLRNTLLITLLSFAIALVLGVAFGLMKVSES-KIAAGLANVY 342 Query: 62 VWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + +FRGTP+LV F ++G+P IG + +VA ++L+LN AY++EI+R ++ S+ G Sbjct: 343 IAVFRGTPILVWAFFFYFGVPQLIGHSVNIWVAGALTLSLNSGAYLAEIVRGAVQSVDSG 402 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q + + ++GL +Q +R +ILPQ + + ++ + ++K +S+ I E+ AQ+ Sbjct: 403 QMEGARSLGLNHRQAMRRVILPQASKIAMPSIINQLVIMIKDSSLLLAIGFGELLYQAQQ 462 Query: 181 IVSTTY---QPLIIYCELAFVYL-ILTSFCYIIQIKIE 214 + + + + L+I + FV + ILT I+ K+ Sbjct: 463 LYAANFRVTETLLIVGVMYFVAITILTWLANIVDRKVN 500 >gi|327438810|dbj|BAK15175.1| ABC-type amino acid transport system, permease component [Solibacillus silvestris StLB046] Length = 233 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 73/194 (37%), Positives = 114/194 (58%), Gaps = 9/194 (4%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 + + L+A IV+T AC ++ +I G + + ++ + I YV +FRGTP+LV Sbjct: 19 YAKGLWATIVLT---AC-GYIGGIIFGLVLGLGQVS-TKKWIYWPAKIYVDVFRGTPMLV 73 Query: 73 QLFVIFYG-LPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 QL +I +P I G +V+ I+ L LN +AY +EI R+ I SI KGQ +A+ ++GL Sbjct: 74 QLLLIHLAVIPTIFGTSQGWWVSGIVGLILNSAAYNAEIFRAGIQSIDKGQMEAARSLGL 133 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T+ Q +R +ILPQ PL +EFI++LK +S+ + I EI + ++V+ TYQ Sbjct: 134 TQSQAMRKVILPQAFRRMIPPLGNEFIALLKDSSLVTVIAGAEILYVS-KVVAGTYQRFW 192 Query: 191 I-YCELAFVYLILT 203 Y AF+YL+LT Sbjct: 193 EPYLFAAFLYLVLT 206 >gi|170735290|ref|YP_001774404.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169821328|gb|ACA95909.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 231 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 122/230 (53%), Gaps = 12/230 (5%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 ++ +LI S P + + +TL + +S + + +AV R +S+ ++ Sbjct: 3 DFLSLIAQSGPDVARG-VWITLQLLVLSCTFAFALAVPLAVARTS-ERRWLSVPSRLFMS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIV---------FDSFVAIIISLTLNFSAYISEIIRSSI 114 +FRGTPLLVQ+FV++YGL IV SF + +LTLN +AY++E IR I Sbjct: 61 VFRGTPLLVQIFVLYYGLAQFSIVRASPLWLLVGGSFSCALCALTLNLAAYMAEDIRGGI 120 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +P G+ +A+ A G++R +++P+ I A L +E + LKST++ASTIT+ ++ Sbjct: 121 AGVPAGEKEAALAFGMSRFMLTWFVVVPRAIGIVAPTLGNEIVLQLKSTALASTITVLDL 180 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 A+RI TY + VY+ +T+ + ++E + +H SV Sbjct: 181 TGVARRISIETYTTDALMLA-GIVYVGITAVLSTVLKRVEGRLNRHLGSV 229 >gi|229140887|ref|ZP_04269432.1| Arginine transport system permease protein artQ [Bacillus cereus BDRD-ST26] gi|229198282|ref|ZP_04324989.1| Arginine transport system permease protein artQ [Bacillus cereus m1293] gi|228585161|gb|EEK43272.1| Arginine transport system permease protein artQ [Bacillus cereus m1293] gi|228642677|gb|EEK98963.1| Arginine transport system permease protein artQ [Bacillus cereus BDRD-ST26] Length = 222 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 120/215 (55%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I +S + ++G +A+ +I + ++ Y IF Sbjct: 8 FSAITPSIPYIL-KGLEVTLKIVAVSALAGFLLGTLLALCKIARIRAL-NIAADLYTSIF 65 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P I G +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 66 RGTPLVLQLMIIYFGVPQIIGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 125 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 126 AMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 185 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y +L ++ IE + + Sbjct: 186 TFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKK 220 >gi|315641051|ref|ZP_07896134.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] gi|315483220|gb|EFU73733.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] Length = 488 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/177 (34%), Positives = 105/177 (59%), Gaps = 14/177 (7%) Query: 41 FIAVIRIFFS---DTIISLI----MHFYVWI-------FRGTPLLVQLFVIFYGLPHIGI 86 F+A+I +FF I++LI + WI RGTPLLVQ+F++++G IGI Sbjct: 294 FLAIIGVFFGAIFGAILALIKLGKIRILRWIATAYIEYVRGTPLLVQIFIVYFGSGIIGI 353 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 A I+L LN +AY++EIIR+ I ++ KGQ +A+ ++G+ ++Q ++ II PQ I Sbjct: 354 DLSKLAAGCIALALNSAAYVAEIIRAGISAVNKGQMEAARSLGMNQRQAMQFIIFPQAIK 413 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +EF++++K +SV S I + E+ A + +++P + Y ++ +Y +LT Sbjct: 414 NILPALGNEFVTVIKESSVVSVIGVSELIFQAGNVQGASFKPFLPYVIVSLIYFVLT 470 >gi|14601702|ref|NP_148243.1| ABC transporter, permease protein [Aeropyrum pernix K1] gi|5105584|dbj|BAA80897.1| ABC transporter, permease protein [Aeropyrum pernix K1] Length = 220 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 100/170 (58%), Gaps = 1/170 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I+ TL I IS + I + R F + + Y+ FRGTPLLVQ+ ++F+ Sbjct: 15 GIMYTLAITIISLSMGFTISLILTAAR-FLGFKPLRMAAEAYINFFRGTPLLVQILMVFF 73 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP +G+ +F + +I++ LN AY +EI+R +I IP+ Q + ++GL+ + ++ + Sbjct: 74 GLPSLGVNLSAFYSAVIAIGLNSGAYQAEILRVAIKGIPEEQMLVARSLGLSEIEIMKGV 133 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 ++PQ + + L++E + +LK +S+AS I + E+ + + +VS T++ L Sbjct: 134 VIPQAVRNAIPGLTNETVILLKESSLASVIGVMELTRVGEYMVSATFRAL 183 >gi|294786680|ref|ZP_06751934.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Parascardovia denticolens F0305] gi|315226290|ref|ZP_07868078.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Parascardovia denticolens DSM 10105] gi|294485513|gb|EFG33147.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Parascardovia denticolens F0305] gi|315120422|gb|EFT83554.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Parascardovia denticolens DSM 10105] Length = 324 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 69/236 (29%), Positives = 126/236 (53%), Gaps = 28/236 (11%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++W + + F + + + TL + SF I+ ++ +A++R + ++ + F+ Sbjct: 59 NFQWKVVWLYLFNEHVLTGVGWTLLLTVGSFAIATVLSVILAIMRQS-QNLVLRGVSWFF 117 Query: 62 VWIFRGTPLLVQLFVIFYGL-----PHIGI---------------VFDSFVAIIISLTLN 101 +W FRGTP+ QL +F+GL P I + +F + VA ++ L LN Sbjct: 118 IWFFRGTPVYTQL--VFWGLIAVLVPKISLGIPFGPSFVSLSTQDIFTAGVAALVGLALN 175 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 +AY+SEI+R+ + S+ GQ +AS A+G++R Q +R I+LPQ + P+S+E I +LK Sbjct: 176 EAAYLSEIVRAGLESVDPGQREASQALGMSRGQIMRRIVLPQAMRIIVPPMSNEAIGLLK 235 Query: 162 STSVASTITIP---EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 +TS+ + +P E+ I + Y+P+ + A YL++TS + Q +E Sbjct: 236 TTSL--VLAVPFTMELQFVTNSIANRIYKPIPLLLVAAIWYLVITSILMVGQTYLE 289 >gi|291544793|emb|CBL17902.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Ruminococcus sp. 18P13] Length = 233 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 117/218 (53%), Gaps = 15/218 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHFYVWIFR 66 D + L + TL + + ++ +++GF IA++R +++ Y+ + R Sbjct: 18 DDRWKYLTDGLSTTLIVTFFAVILGMVLGFLIAIVRATHDKNGKLGVLNFFAKVYLTVIR 77 Query: 67 GTPLLVQLFVIFYGLPHIGIVF-----DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 GTP++VQL ++++ I+F D + I++ LN +AY++EI+RS I+SI GQ Sbjct: 78 GTPVVVQLLILYF------IIFATVNIDKTLVAILAFGLNSAAYVAEIVRSGIMSIDNGQ 131 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++A ++GL +T+ IILPQ L++E I +LK TSVA I + ++ + I Sbjct: 132 FEAGASLGLNYSKTMLCIILPQAFKNILPALANECIVLLKETSVAGYIALVDLTKGGDII 191 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S TY+ + +A +YL++ F + K+E + + Sbjct: 192 RSQTYEAFLPLIAVAIIYLVMVMFLSAMVTKLERRLAK 229 >gi|282857607|ref|ZP_06266826.1| L-cystine transport system permease protein TcyL [Pyramidobacter piscolens W5455] gi|282584557|gb|EFB89906.1| L-cystine transport system permease protein TcyL [Pyramidobacter piscolens W5455] Length = 221 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 58/177 (32%), Positives = 107/177 (60%), Gaps = 5/177 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + FP L+ +++ +T IA +S +L++ IA++R ++ +++ +V +F Sbjct: 5 FKSFTELFP-LVLSSLGLTAEIAALSLAGTLVLSTVIAIVR-YYKFPLLTQFFDAFVTVF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 R TPL+V LF+IF+ LP + + F A ++SL N SA+++E R+++ S+ KGQ Sbjct: 63 RATPLVVALFMIFFALPCLIPALKAMTPFQATVVSLICNTSAFMAESFRAALESVDKGQI 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +A Y++G+TR Q +R ILPQ +A + + FI I+K T++ T+ + ++ TA+ Sbjct: 123 EACYSMGMTRAQAMRRAILPQAFVVAAPSIGNHFIGIIKGTALGFTVGLADVMGTAK 179 >gi|262275664|ref|ZP_06053473.1| ABC-type amino acid transport system permease component [Grimontia hollisae CIP 101886] gi|262219472|gb|EEY70788.1| ABC-type amino acid transport system permease component [Grimontia hollisae CIP 101886] Length = 221 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 94/161 (58%), Gaps = 1/161 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ +FRGT LLVQLF +FY LP G+ D+F A +++ LN +Y +E++R I ++P+G Sbjct: 57 YIELFRGTSLLVQLFWVFYVLPLFGLTLDAFTAGFVTVGLNLGSYGAELVRGGIQAVPRG 116 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A+ + + + IILPQ + T + I +LK T++ + I++ ++ A++ Sbjct: 117 QWEAAKALNMPNHKRMIRIILPQALLTMLPAWGNLLIELLKGTALVALISVSDLMFEAKQ 176 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIK-IESSVTQH 220 I TT+ + +Y IL F ++ +ES +T+ Sbjct: 177 INGTTFLSAQAFGTALIIYYILARFIITPGMRLLESYMTKK 217 >gi|170695848|ref|ZP_02886989.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170139272|gb|EDT07459.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 251 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/230 (29%), Positives = 128/230 (55%), Gaps = 11/230 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ ++D+ QLL AA+ TL + S V+ ++ I +R+ + + Y+ +F Sbjct: 5 FDFLLDTIRQLL-AAVPTTLGLFFCSLVLGGLLSLVIVTMRVS-PHWLPNRFARAYILVF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIIS 116 RG+PLL+Q+F+++YG+ G++ +SF + ++SL L + Y +EIIR +++ Sbjct: 63 RGSPLLIQMFLVYYGMGQFGVIRESFLWPVLREPYMCAVLSLALCTAGYTAEIIRGGLMA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P GQ +A Y+IGL+ +R +I P + S+E + ++KST++AS +T+ E+ Sbjct: 123 VPVGQIEAGYSIGLSGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 AQ+I+ TY+ ++ A +YL L +E+ +++H + K Sbjct: 183 VAQQIIQQTYRTTEVFICAALIYLFLNFVIVRALSMLETRLSRHLRAAPK 232 >gi|227431661|ref|ZP_03913695.1| amino acid ABC superfamily ATP binding cassette transporter, pemease component [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352582|gb|EEJ42774.1| amino acid ABC superfamily ATP binding cassette transporter, pemease component [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 186 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 68/182 (37%), Positives = 108/182 (59%), Gaps = 3/182 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +I+D P ++ ++ TL + V I G IA+ R+ + +IS I Y+ +F Sbjct: 5 YEMILDYAPFFMHG-LLYTLLFSLCGVVFGTIFGLIIALGRMS-KNPVISGIFKTYIGLF 62 Query: 66 RGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL VQ+ + +G+ P I + ++A +SL+LN +AYI+E RS I SI +GQ +A Sbjct: 63 RGTPLFVQILITNFGVVPAIFGHSNLYIAGALSLSLNAAAYIAETFRSGIQSISEGQREA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 S +GL++ T+R II+PQ I L +EFIS++K +S+ S I+ PEI AQ + + Sbjct: 123 SRTLGLSQFDTMRFIIVPQAIKIVIPALGNEFISLIKDSSLVSAISGPEITYWAQAMNAQ 182 Query: 185 TY 186 Y Sbjct: 183 YY 184 >gi|224418024|ref|ZP_03656030.1| amino acid ABC transporter permease [Helicobacter canadensis MIT 98-5491] gi|253827356|ref|ZP_04870241.1| ABC-type transport system, permease component [Helicobacter canadensis MIT 98-5491] gi|313141563|ref|ZP_07803756.1| amino acid transport system permease protein [Helicobacter canadensis MIT 98-5491] gi|253510762|gb|EES89421.1| ABC-type transport system, permease component [Helicobacter canadensis MIT 98-5491] gi|313130594|gb|EFR48211.1| amino acid transport system permease protein [Helicobacter canadensis MIT 98-5491] Length = 225 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/193 (33%), Positives = 115/193 (59%), Gaps = 4/193 (2%) Query: 29 CISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF 88 +S +I + +G IA++++ + ++S + YV+I RGTP++VQL +I+ + +G + Sbjct: 33 ALSALIGIALGILIALMQLS-TWKVLSKLAFAYVYIIRGTPVVVQL-MIWANIVFVGALR 90 Query: 89 DSFVAII--ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 D + +I I+ +N AY++EIIR+ I + KGQ +A+ A+G+ +++ II+PQ I Sbjct: 91 DMPILLIAAIAFGINSGAYVAEIIRAGIAGLDKGQMEAARALGMGYALSMKEIIIPQAIK 150 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFC 206 PL SEFI++LK TS+ I ++ + A I S TY+ + + +YLILTS Sbjct: 151 RILPPLVSEFIALLKETSIVGFIGGVDLLRAANIITSQTYRAIEPLLAVGIIYLILTSIF 210 Query: 207 YIIQIKIESSVTQ 219 ++ K+E + + Sbjct: 211 AMLMRKVEKRLKE 223 >gi|184154979|ref|YP_001843319.1| glutamine ABC transporter permease component [Lactobacillus fermentum IFO 3956] gi|260663374|ref|ZP_05864265.1| glutamine ABC transporter permease component [Lactobacillus fermentum 28-3-CHN] gi|183226323|dbj|BAG26839.1| glutamine ABC transporter permease component [Lactobacillus fermentum IFO 3956] gi|260552226|gb|EEX25278.1| glutamine ABC transporter permease component [Lactobacillus fermentum 28-3-CHN] gi|299782992|gb|ADJ40990.1| Glutamine ABC transporter permease component [Lactobacillus fermentum CECT 5716] Length = 215 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 102/176 (57%), Gaps = 6/176 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVW 63 F I++ P L A +TL + + + SL +G ++ + + I L ++ YVW Sbjct: 3 FKYIMEILPSLFQGA-GLTLQLFFWTLIGSLPLGI---IVSLGLTSKIKPLKWVLEMYVW 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLL+QL +FYGLP IGIVF + A +++ LN++AY +EI R + SI +GQ++ Sbjct: 59 LMRGTPLLLQLIFVFYGLPIIGIVFQRYDAALVAFILNYAAYFAEIFRGGLQSISQGQYE 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 + + L+ QT+R I++PQ + + +E I+++K +S+ I + ++ + Sbjct: 119 GARVLRLSYWQTVRKIVIPQVVKIVIPSIGNEVINLIKDSSLVYVIGLGDLLRAGN 174 >gi|154487057|ref|ZP_02028464.1| hypothetical protein BIFADO_00895 [Bifidobacterium adolescentis L2-32] gi|154084920|gb|EDN83965.1| hypothetical protein BIFADO_00895 [Bifidobacterium adolescentis L2-32] Length = 516 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 123/218 (56%), Gaps = 7/218 (3%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K + L+ S P LL + TL I +SF I+L++G ++++ S I + + + Y Sbjct: 300 KVGFLGLVKQSMPALL-TGLRNTLLITLLSFAIALVLGVAFGLMKVSES-KIAAGLANVY 357 Query: 62 VWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + +FRGTP+LV F ++G+P IG + +VA ++L+LN AY++EI+R ++ S+ G Sbjct: 358 IAVFRGTPILVWAFFFYFGVPQLIGHSVNIWVAGALTLSLNSGAYLAEIVRGAVQSVDSG 417 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q + + ++GL +Q +R +ILPQ + + ++ + ++K +S+ I E+ AQ+ Sbjct: 418 QMEGARSLGLNHRQAMRRVILPQASKIAMPSIINQLVIMIKDSSLLLAIGFGELLYQAQQ 477 Query: 181 IVSTTY---QPLIIYCELAFVYL-ILTSFCYIIQIKIE 214 + + + + L+I + FV + ILT I+ K+ Sbjct: 478 LYAANFRVTETLLIVGVMYFVAITILTWLANIVDRKVN 515 >gi|332983239|ref|YP_004464680.1| PAAT family amino acid ABC transporter membrane protein [Mahella australiensis 50-1 BON] gi|332700917|gb|AEE97858.1| amino acid ABC transporter membrane protein, PAAT family [Mahella australiensis 50-1 BON] Length = 224 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 117/218 (53%), Gaps = 12/218 (5%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 + N I D + + T+ IA + + +IIG +A+ +I + I +++ YV I Sbjct: 9 YRNFIRDDRYMYMLNGLETTVIIALAAAALGMIIGVVMALGKIS-KNKIFNVLASTYVEI 67 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDS-----FVAIIISLTLNFSAYISEIIRSSIISIPK 119 RGTP +VQL +I+Y I+F S + I++ +N Y++EI+R+ I ++ K Sbjct: 68 IRGTPTVVQLMIIYY------IIFGSTAVPKLMIAIVAFGINSGGYVAEIVRAGIQAVDK 121 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ ++G+T +RH+I+PQ L +EFI++LK TSV+ I + ++ + A Sbjct: 122 GQMEAARSLGMTYGMAMRHVIMPQAFRNILPALVNEFITLLKETSVSGFIALDDLTKGAD 181 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 I T+ P A +YL+LT+ I K+E + Sbjct: 182 IIRGITFDPYTPLLTAAAIYLVLTNLISFIFRKVERRM 219 >gi|310767115|gb|ADP12065.1| glutamine ABC transporter, permease protein [Erwinia sp. Ejp617] Length = 219 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 64/220 (29%), Positives = 124/220 (56%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P LL A +TL I+ + V +IIG R + + I Sbjct: 1 MQFDW-SAIWPAIPILLEGA-RMTLLISVLGLVGGVIIGLIAGFARAY-GGWLSRNIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIELIRGTPIVVQVMFIYFALPMAFTDLRIDPFSAAVVTIIINSGAYIAEITRGAVLSIN 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +G +A A+GL+ ++T+R++I+P + PL +++I +K TS+ I + E+ + Sbjct: 118 RGFREAGLALGLSGRETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A +YLI+T + ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVIYLIITLVLSFVLRRLERRMK 217 >gi|303240423|ref|ZP_07326940.1| polar amino acid ABC transporter, inner membrane subunit [Acetivibrio cellulolyticus CD2] gi|302591988|gb|EFL61719.1| polar amino acid ABC transporter, inner membrane subunit [Acetivibrio cellulolyticus CD2] Length = 236 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 101/174 (58%), Gaps = 5/174 (2%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYG-LPHIGIVFDSFVAIIISLTLNFSAYISEII 110 I++ I FYV +FRGTP++VQL V +Y LP IG+ + I+ N AY+SEI+ Sbjct: 63 KILNGICDFYVGLFRGTPVVVQLLVAYYVILPLIGVNMPALNVCILVFGFNSGAYVSEIM 122 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R I+S+ GQ +A A+GL+ + T+ I++PQ I L +EFI+++K TSV S + Sbjct: 123 RGGIMSVDHGQMEAGRALGLSYRITMLKIVVPQAIKNILPTLGNEFIALIKETSVVSFVG 182 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL----TSFCYIIQIKIESSVTQH 220 +++ I + +Y+ ++ Y +A +Y++L S I++ ++ S ++ Sbjct: 183 TADLYVAFNYIGTNSYEFMVPYLVMAIIYIVLVMIIASLIKIMERRLRKSDRRN 236 >gi|293400689|ref|ZP_06644834.1| amino acid ABC transporter, permease/substrate-binding protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305715|gb|EFE46959.1| amino acid ABC transporter, permease/substrate-binding protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 510 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/187 (34%), Positives = 109/187 (58%), Gaps = 7/187 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL +A ++ + +IG A+I++ + I L+ YV RGTPLL+QL++ Sbjct: 310 GLGMTLGLAFVTVLGGTLIGTAFALIKLS-KNRFIQLLSSAYVEAIRGTPLLLQLWLFVS 368 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 I V++I++L +N SAY++EIIR I+S+ KGQW+A+ ++G++ + + I Sbjct: 369 IFAAINSDIPMMVSVIVALIINSSAYVAEIIRGGILSVDKGQWEAAKSLGMSNQHMMVKI 428 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY---QPLIIYCELA 196 I PQ I + L +EFI ++K TS+AS+ I E+ + + TY +PL I A Sbjct: 429 IFPQAIKSILPSLGNEFIMMVKETSLASSFYIGELMSVNNIVKTATYFSLEPLTI---AA 485 Query: 197 FVYLILT 203 +YLI+T Sbjct: 486 IIYLIVT 492 >gi|304440010|ref|ZP_07399903.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371502|gb|EFM25115.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Peptoniphilus duerdenii ATCC BAA-1640] Length = 556 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/190 (32%), Positives = 104/190 (54%), Gaps = 10/190 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIF---------FSDTIISLIMHFYVWIFRGTPLLVQL 74 T+ I+ + V+ L++G + +IR F I ++ + YV + RGTP++VQ Sbjct: 334 TVLISFVGTVLGLVLGLIVGIIRTIPESLKKGKNFVLNIFKVLANIYVQVLRGTPMIVQS 393 Query: 75 FVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 ++++GL GI A + +++N AY+SE++R I SI KGQ++A+ ++G+ Sbjct: 394 VLVYFGLLQFAGINLSPMQAAFLVVSVNTGAYLSEVVRGGINSIDKGQFEAARSLGMNHY 453 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 QT+ H++LPQ I + +EFI +K TSV + I + E+F T + IV Y Sbjct: 454 QTMVHVVLPQAIKNIIPAIGNEFIVNIKDTSVLNVIAVNELFFTTKSIVGGNLMYFETYL 513 Query: 194 ELAFVYLILT 203 + +YL LT Sbjct: 514 ITSIIYLTLT 523 >gi|327192279|gb|EGE59244.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 219 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 50/144 (34%), Positives = 89/144 (61%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 +Y+ +F+GTPLL+QLF+ F+GL GI +++A ++L L +A+++EI R + S+ Sbjct: 54 KYYIELFQGTPLLMQLFIAFFGLGLFGIDVPAWLAAGMALILWTAAFLAEIWRGCVESVA 113 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQW+AS ++G+ R Q +R++ILPQ + + P + I+K T++ S I E+ + Sbjct: 114 SGQWEASASLGMGRLQQMRYVILPQALRVAIPPTVGFSVQIIKGTALTSIIGFVELSKAG 173 Query: 179 QRIVSTTYQPLIIYCELAFVYLIL 202 + + T+QP +Y +A +Y L Sbjct: 174 TVVTNATFQPFTVYGLVALIYFAL 197 >gi|311069228|ref|YP_003974151.1| glutamine ABC transporter permease [Bacillus atrophaeus 1942] gi|310869745|gb|ADP33220.1| glutamine ABC transporter (permease) [Bacillus atrophaeus 1942] Length = 218 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/163 (40%), Positives = 98/163 (60%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +VTL +A IS V+S + G I +R + + I+S I+ V R PLL+ +F Sbjct: 15 LLDGFLVTLYVAFISIVLSFMFGGVIGTLR-YANIPIVSNILAVAVETIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ LP IGI + A I +LT+ SA +SEIIRS + S+ KGQ +A+ + GL+ QT+ Sbjct: 74 TYFALPEIGIKLEITAAAITALTIFESAMLSEIIRSGLKSVEKGQTEAARSSGLSYVQTL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 II+PQ + P+ S+FIS+LK TS+A I +PE+ AQ Sbjct: 134 FLIIMPQALRRMVPPIVSQFISLLKDTSLAVVIALPELIHNAQ 176 >gi|309776367|ref|ZP_07671354.1| arginine transport system permease protein ArtQ [Erysipelotrichaceae bacterium 3_1_53] gi|308915886|gb|EFP61639.1| arginine transport system permease protein ArtQ [Erysipelotrichaceae bacterium 3_1_53] Length = 217 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 121/218 (55%), Gaps = 10/218 (4%) Query: 6 FNL-IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 FN+ II F QLL + + V L ++ S +IG +R + + + I+ Y+ + Sbjct: 3 FNITIIQRFWQLLLSGVPVILYLSLASAFFGTLIGLATVFLRRM--NKVFNAIVAAYIDL 60 Query: 65 FRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTP+ VQ+FVI++G+P IG+ +++VA I+ +LN AY+SEI+R+ I I KGQ + Sbjct: 61 FRGTPVYVQMFVIYFGIPGLIGLNINNWVAAILVFSLNSGAYMSEIMRAGIDGIDKGQIE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI---FQTAQR 180 A+ A+G++ + II+PQ + +EFI++ K TS+ S + + ++ F + Sbjct: 121 AAKALGVSGTDIAKDIIIPQAFRNVLPAVINEFITLTKETSIVSVLGLHDMMYWFYAVKN 180 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 ++PL+I + VY I+ +I IE + Sbjct: 181 QTYADFEPLLI---VFLVYYIMNKILSLIGKMIERKLK 215 >gi|300856061|ref|YP_003781045.1| putative amino acid ABC transporter permease [Clostridium ljungdahlii DSM 13528] gi|300436176|gb|ADK15943.1| predicted ABC-type aminoacid transporter, permease component [Clostridium ljungdahlii DSM 13528] Length = 221 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 120/210 (57%), Gaps = 5/210 (2%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 FP +L + +T+ +A S S+I+GF IA R +++ ++ + +V FR TP + Sbjct: 12 FPVIL-RGLPITVEVAGASLFFSVILGFVIAAFR-YYNIPMLKQLSTVFVSFFRSTPFIA 69 Query: 73 QLFVIFYGLPHIGIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 QLFV +YG+ + + SF A II L+L+F+AY+SE IR +I S+ KGQ++A +IG Sbjct: 70 QLFVFYYGIAQVSKLVKNMPSFWATIIVLSLSFAAYMSEDIRGAITSVDKGQFEAGISIG 129 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+ QT+ II+PQ + + + + F ++ KSTS+ + + ++ + + +++ L Sbjct: 130 LSSWQTVYRIIIPQAVRVAIPGMMNSFANLFKSTSLCFIVGLKDMIAYCKNEANVSFRYL 189 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 Y + +Y I+ S +Q ++E + + Sbjct: 190 EGYMAVLIIYWIILSSISYLQSRLERHMNK 219 >gi|260461178|ref|ZP_05809427.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259033212|gb|EEW34474.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 230 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/150 (38%), Positives = 96/150 (64%), Gaps = 10/150 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-------IGIVF---DSFVAIIISLTLNFSAYISEII 110 +V +FRGTPLLVQ+F+I+YGL +G+ + + + II+L+LN +AY SEI+ Sbjct: 57 FVAVFRGTPLLVQIFLIYYGLGQFRPTLQSVGLWWLFREPYWCAIIALSLNTAAYGSEIL 116 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R +I +P+G +A+ A G+TR QT+R ++LP + + S+E I ++K TS+AS +T Sbjct: 117 RGAIQGVPRGLVEAASAFGMTRLQTLRLVVLPLALRQAIPSYSNEIILMVKGTSLASIVT 176 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 + E+ AQ ++S TY+ + ++ +YL Sbjct: 177 LMEVTGIAQGLISQTYRAIEVFVAAGAIYL 206 >gi|224437529|ref|ZP_03658487.1| polar amino acid ABC transporter, inner membrane subunit [Helicobacter cinaedi CCUG 18818] gi|313143980|ref|ZP_07806173.1| polar amino acid ABC transporter [Helicobacter cinaedi CCUG 18818] gi|313129011|gb|EFR46628.1| polar amino acid ABC transporter [Helicobacter cinaedi CCUG 18818] Length = 235 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/138 (44%), Positives = 90/138 (65%), Gaps = 4/138 (2%) Query: 53 IISLIMHFYVWIFRGTPLLVQL-FVIFYGLPHIGIVFDS--FVAIIISLTLNFSAYISEI 109 I+ + + YV FRGTP++VQL F+ F LP G+ S VA++I LN AY+SEI Sbjct: 63 ILCVFLKAYVGFFRGTPIVVQLLFIYFVILPAFGLKGMSALLVAVVI-FGLNSGAYVSEI 121 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IRS I+SI KGQ +A+ A+GL+ ++R+II PQ + S L +EFI++LK TSVA+ I Sbjct: 122 IRSGILSIDKGQDEAARALGLSSSLSMRYIIFPQALKNSLPTLGNEFIALLKETSVANYI 181 Query: 170 TIPEIFQTAQRIVSTTYQ 187 T+ ++ + I S TY+ Sbjct: 182 TVHDLTYAFKSIGSATYE 199 >gi|153012083|ref|YP_001373294.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151563971|gb|ABS17465.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 307 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/228 (31%), Positives = 125/228 (54%), Gaps = 28/228 (12%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL + ++ I +++G +A++ + ++ +IS + + Y+W FRGTP+LVQL + +Y Sbjct: 69 GLYLTLWLTVVTMAIGVVLGTILAIMAMS-NNIVISNVANAYIWFFRGTPVLVQL-IFWY 126 Query: 80 GL----PH--IGIVFDSF-------------VAIIISLTLNFSAYISEIIRSSIISIPKG 120 L P IG+ F S+ A ++ L LN AY+SEIIRS ++S+ G Sbjct: 127 NLGALFPEMSIGLPFTSWWISVPTNSLISPVTAAVLGLGLNEGAYMSEIIRSGLMSVEPG 186 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q A+ ++G+T + + IILPQ + P ++ I +LK++S+ S I++ ++ +AQ Sbjct: 187 QKQAAKSLGMTNGKALWRIILPQAMPVIIPPTGNQTIGMLKTSSLVSVISLADLLYSAQT 246 Query: 181 IVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE---SSVTQHTYS 223 I S +Q PL+I YL T+ Q++IE Q T++ Sbjct: 247 IYSRNFQTIPLLIVA--CIWYLAATTILSAAQVRIERHFGRSNQQTHN 292 >gi|302873344|ref|YP_003841977.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium cellulovorans 743B] gi|307688486|ref|ZP_07630932.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium cellulovorans 743B] gi|302576201|gb|ADL50213.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium cellulovorans 743B] Length = 216 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/151 (37%), Positives = 96/151 (63%), Gaps = 12/151 (7%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD-------SFVAIIISLTLNF 102 + ++ + FY+ + RGTPL++QL V+++ P+ VF F+A+II+ LN+ Sbjct: 42 KNFLVRAVTKFYISVMRGTPLMLQLIVVYFA-PYY--VFKIQLGNSYRFIAVIIAFVLNY 98 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +EI RS I SIP GQ++A+ +G T+ QT IILPQ I P+++E I+++K Sbjct: 99 AAYFAEIYRSGIESIPVGQYEAAKVLGYTKSQTFFKIILPQVIKRILPPVTNETITLVKD 158 Query: 163 TSVASTITIPEIFQTAQRIVS--TTYQPLII 191 TS+A ++I E+F A+++ + TT PL++ Sbjct: 159 TSLAFVLSIVEMFTAAKQVAASGTTMMPLMV 189 >gi|315037817|ref|YP_004031385.1| glutamine ABC transporter membrane protein [Lactobacillus amylovorus GRL 1112] gi|325956292|ref|YP_004286902.1| glutamine ABC transporter membrane protein [Lactobacillus acidophilus 30SC] gi|312275950|gb|ADQ58590.1| glutamine ABC transporter membrane protein [Lactobacillus amylovorus GRL 1112] gi|325332857|gb|ADZ06765.1| glutamine ABC transporter membrane protein [Lactobacillus acidophilus 30SC] gi|327183111|gb|AEA31558.1| glutamine ABC transporter membrane protein [Lactobacillus amylovorus GRL 1118] Length = 218 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 116/205 (56%), Gaps = 9/205 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W ++ + L + VT+ ++ IS +S ++G + +IR + +S I+ F + Sbjct: 8 YSWVDI------RFLLQGLWVTIYVSLISIALSFVVGLILGLIR-YMKVKYLSAIVGFII 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP +GIV + A I +L + A ++EI+RS I S+ GQ Sbjct: 61 DIIRNLPLLLIIFFTYFGLPQLGIVTNPTTASITALVIFEGAMLAEIVRSGIGSVDPGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + G++ Q + H+I+PQ + L S+F+S++K TS+A+ I +PE+ AQ I Sbjct: 121 EGARSNGMSYGQAMYHVIMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLILTSFC 206 S LI IY +A +Y I+ FC Sbjct: 181 SQNTTYLIPIYVIIAVMYFIVC-FC 204 >gi|315613064|ref|ZP_07887975.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] gi|315315174|gb|EFU63215.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] Length = 213 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/160 (35%), Positives = 90/160 (56%), Gaps = 1/160 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ Y+W+ RGTPLL+QL I+Y LP IGI D A +I+ LN++AY +EI R I + Sbjct: 50 LIDLYIWVMRGTPLLLQLIFIYYVLPSIGIRLDRLPAAVIAFVLNYAAYFAEIFRGGIET 109 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQ++A+ + + T+R+IILPQ + +E +S++K TS+ + I ++ Sbjct: 110 IPKGQYEAAKVLKFSPFDTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLI- 168 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 A R + L+ +YLI+ I+ K+E Sbjct: 169 LASRTAANRDASLVPMFLAGAIYLIMIGIVTIVAKKLEKK 208 >gi|118590274|ref|ZP_01547677.1| amino acid ABC transporter, permease protein [Stappia aggregata IAM 12614] gi|118437246|gb|EAV43884.1| amino acid ABC transporter, permease protein [Stappia aggregata IAM 12614] Length = 215 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 114/206 (55%), Gaps = 13/206 (6%) Query: 21 IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG 80 +VVT+ +A ++ L +GF IA+ + S+ + L + Y +FRG P L+ LF++++G Sbjct: 1 MVVTVCLAIVTLPFGLFLGFLIALAKKS-SEPSLRLAANIYTTLFRGLPELLTLFLVYFG 59 Query: 81 L--------PHIGIVF----DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 L G F +SF+A +I+L+ FS+Y SE S+ IP+GQ++ YA+ Sbjct: 60 LQIAVQVLLKMAGFDFYFEVNSFIAGVIALSFVFSSYTSEAFLSAFRGIPQGQYEGGYAL 119 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL++ +T+R ++LPQ I + L + ++ +LK TS+ S I + ++ + + T +P Sbjct: 120 GLSKGKTLRLVVLPQLIRLALPALGNSWLVLLKDTSLVSVIGLSDVMRQSGIAARVTKEP 179 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIE 214 + + +YL+L ++IE Sbjct: 180 FMFFGIACLIYLVLAMISSTGLVRIE 205 >gi|83746635|ref|ZP_00943685.1| GltJ [Ralstonia solanacearum UW551] gi|207727925|ref|YP_002256319.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum MolK2] gi|207742330|ref|YP_002258722.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum IPO1609] gi|83726769|gb|EAP73897.1| GltJ [Ralstonia solanacearum UW551] gi|206591167|emb|CAQ56779.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum MolK2] gi|206593720|emb|CAQ60647.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum IPO1609] Length = 242 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/197 (30%), Positives = 111/197 (56%), Gaps = 11/197 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + T+ + S++I+L++G + V+R + ++S + YV +FR PL+VQLF+ Sbjct: 24 LLSGLKTTIALGLSSWIIALVLGSVLGVLRTV-PNKVLSGLATAYVELFRNIPLIVQLFI 82 Query: 77 IFYGLPHIGIVFD----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 ++ +P + D F+ ++ L +A + E +RS I S+P+GQ +A Sbjct: 83 WYFVMPELVPGGDYIKQMNPTTAMFLCAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGL 142 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G T QT RH++LP PL+SEF++I K+++VASTI + E+ +++V T Sbjct: 143 AMGFTLAQTYRHVMLPMAFRIIVPPLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTA 202 Query: 187 QPLIIYCELAFVYLILT 203 QP + + +Y+++ Sbjct: 203 QPYESFIAVTLMYMLIN 219 >gi|315653694|ref|ZP_07906614.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners ATCC 55195] gi|315489056|gb|EFU78698.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners ATCC 55195] Length = 498 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/182 (33%), Positives = 109/182 (59%), Gaps = 4/182 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +TL I S +I +I+G +A++R+ S + + Y+ + RGTP +VQ+ +++ Sbjct: 298 GIELTLVITIFSVLIGVILGTILALMRLS-SHLALKIPAICYIELIRGTPQMVQILFVYF 356 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G+ I + +A II++ LN AY++E IRS I S+P GQ +A+ ++GL++ T R++ Sbjct: 357 GIGAIIQNMSALLAGIIAIGLNSGAYVAEDIRSGINSLPVGQAEAARSLGLSKAATYRYV 416 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCELA 196 ++PQ I L +EFI++LK +S+ S I + E Q + ++TYQ PL++ + Sbjct: 417 VIPQAIKNIWPALGNEFITLLKDSSLVSIIGVAETMYQTQLVQTSTYQGVFPLVVAMAIY 476 Query: 197 FV 198 F+ Sbjct: 477 FI 478 >gi|293603168|ref|ZP_06685601.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292818399|gb|EFF77447.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 221 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 118/203 (58%), Gaps = 4/203 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++ F+ I++++ + + +T+ ++ I+ V S+++G IA++R++ + + + F Sbjct: 1 MEFD-FSPIVENW-RFFAGGLGITIALSAITAVSSILLGLVIALLRLY-GPRWLRMALVF 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ R P+LV L I++ P + G+ F F A +++LTL+ +AY +E+IR+ I S+ Sbjct: 58 YIDSMRAIPVLVVLVWIYFAFPLLAGVNFAPFWAALVALTLHIAAYSAEVIRAGIESVRP 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ A A+G++R Q +R IILPQ S +K T++A+ I +PE+ A+ Sbjct: 118 GQMRAGLALGMSRAQALRKIILPQATIRMLPAFGSVLTVAIKDTAIATVIAVPELMHKAE 177 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 I +Y+P+ ++ + Y ++ Sbjct: 178 TIAGQSYRPIEVFTAVIVAYFVI 200 >gi|42783270|ref|NP_980517.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|206976334|ref|ZP_03237242.1| amino acid ABC transporter, permease protein [Bacillus cereus H3081.97] gi|217961644|ref|YP_002340214.1| amino acid ABC transporter, permease protein [Bacillus cereus AH187] gi|222097601|ref|YP_002531658.1| amino acid ABC transporter , permease protein [Bacillus cereus Q1] gi|42739198|gb|AAS43125.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|206745530|gb|EDZ56929.1| amino acid ABC transporter, permease protein [Bacillus cereus H3081.97] gi|217066079|gb|ACJ80329.1| amino acid ABC transporter, permease protein [Bacillus cereus AH187] gi|221241659|gb|ACM14369.1| amino acid ABC transporter, permease protein [Bacillus cereus Q1] Length = 219 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 120/215 (55%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I +S + ++G +A+ +I + ++ Y IF Sbjct: 5 FSAITPSIPYIL-KGLEVTLKIVAVSALAGFLLGTLLALCKIARIRAL-NIAADLYTSIF 62 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P I G +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 63 RGTPLVLQLMIIYFGVPQIIGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 123 AMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y +L ++ IE + + Sbjct: 183 TFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKK 217 >gi|322831660|ref|YP_004211687.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321166861|gb|ADW72560.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 217 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/166 (34%), Positives = 94/166 (56%), Gaps = 8/166 (4%) Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 +L + Y +F+GTPLL+QLF+ F+GL GI + A ++LTL SAY+ +I SI Sbjct: 50 TLFVRLYSELFQGTPLLMQLFLAFFGLGLFGINVSPWTAAALALTLYTSAYLVDIWSGSI 109 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++PKGQW+AS +GL QT+ +I PQ + + P + ++K T++AS I E+ Sbjct: 110 AALPKGQWEASRCLGLNFGQTLWRVITPQALRIAIAPTVGFSVQVVKGTALASIIGFVEL 169 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + + + TY+P ++ +A Y ++ CY + S +QH Sbjct: 170 TKAGTMLNNVTYEPFKVFGLVALGYFLM---CYPL-----SRYSQH 207 >gi|227877816|ref|ZP_03995840.1| glutamine ABC superfamily ATP binding cassette transporter membrane protein [Lactobacillus crispatus JV-V01] gi|256850694|ref|ZP_05556118.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus MV-1A-US] gi|227862577|gb|EEJ70072.1| glutamine ABC superfamily ATP binding cassette transporter membrane protein [Lactobacillus crispatus JV-V01] gi|256712465|gb|EEU27462.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus MV-1A-US] Length = 217 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 116/205 (56%), Gaps = 9/205 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W ++ + L + VT+ ++ IS +S ++G + ++R + +S I+ F + Sbjct: 8 YSWVDI------RFLLQGLWVTIYVSLISIALSFVVGLILGLVR-YMKIKYVSAIVGFII 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP +GIV + A I +L + A ++EI+RS I S+ GQ Sbjct: 61 DIIRNLPLLLIIFFTYFGLPQLGIVTNPTTASIAALVIFEGAMLAEIVRSGIGSVDSGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + G++ Q + H+I+PQ + L S+F+S++K TS+A+ I +PE+ AQ I Sbjct: 121 EGARSNGMSYGQAMYHVIMPQALHNMISALLSQFVSLVKDTSLATIIVLPELLYHAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLILTSFC 206 S LI +Y +A +Y I+ FC Sbjct: 181 SQNTTYLIPMYVIIAIMYFIVC-FC 204 >gi|170694470|ref|ZP_02885623.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170140604|gb|EDT08779.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 567 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/154 (36%), Positives = 93/154 (60%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+W RGTP L+QL IF LP IG+ FD +I LN +A+ +E+ R+ I+S+ + Sbjct: 94 YIWFVRGTPQLLQLVFIFDALPLIGLRFDEVSTAVIGFALNEAAFSAELFRAGILSVNRS 153 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q A+ A+G+ T+R IILPQ++ L+++ I +LK TS+AS I + E+ +Q+ Sbjct: 154 QSIAAAALGMGPLLTLRRIILPQSMRAVIPGLANDTIGMLKLTSIASVIFVNELTFRSQQ 213 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 +V ++ ++ A +YL LTS ++Q+ +E Sbjct: 214 VVGQNFKFFTVFGAAAVIYLFLTSGISLVQVWLE 247 >gi|154686885|ref|YP_001422046.1| GlnM [Bacillus amyloliquefaciens FZB42] gi|154352736|gb|ABS74815.1| GlnM [Bacillus amyloliquefaciens FZB42] Length = 216 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 111/200 (55%), Gaps = 9/200 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E F++ ID F L A+ I+ S +G IAV+RI + + I YV Sbjct: 8 ENFDMYIDGFLHTLLASF--------IALAGSFALGVLIAVMRIT-AFKPLQWIGTAYVE 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 R PLL+ FV ++GLP+ G+ D F A I+LT+ SA+I+E IR+ I ++ KGQ + Sbjct: 59 FIRNIPLLLITFVFYFGLPNAGLRLDGFQAGTIALTIYTSAFIAEAIRAGIQTVSKGQME 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ + G T Q +R++ILPQ + PL ++F++++K++S+ + ++ A + S Sbjct: 119 AARSSGFTYSQAMRYVILPQAVKIVIPPLGNQFLNLVKNSSILGVVAGLDLMYQADLVSS 178 Query: 184 TTYQPLIIYCELAFVYLILT 203 +T +Y +A YLI+T Sbjct: 179 STLVVFDVYIFVALFYLIVT 198 >gi|49474283|ref|YP_032325.1| ABC transporter, permease protein [Bartonella quintana str. Toulouse] gi|49239787|emb|CAF26177.1| ABC transporter, permease protein [Bartonella quintana str. Toulouse] Length = 235 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/234 (29%), Positives = 122/234 (52%), Gaps = 21/234 (8%) Query: 4 EWFNLIIDSFPQLLY-------AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 EW + + + P LL + ++T + I+ + I+G I R+ ++ + Sbjct: 4 EWLHFLFN--PALLNRYGLKFISGFLITFELVFIACSLGFILGMLITFARLL-NNKFLRY 60 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF----------DSFVAIIISLTLNFSAYI 106 + YV+ FRG+PLL QLF+ +YGL +G + +++ I LN +AY Sbjct: 61 FANTYVYFFRGSPLLAQLFLFYYGLGSMGSFWQQIGLWWFFQNAWYCCIFIFALNSAAYQ 120 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 SEI + S +S+ Q +AS A+GL+ T IILPQ + + PL +EFI ++KS+++A Sbjct: 121 SEIFKGSFLSVTARQREASKALGLSSSTTFFRIILPQAMVLALRPLGNEFILMIKSSAIA 180 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S +TI ++ A+ S T+ +Y A +YL++ + + IE +T++ Sbjct: 181 SLVTIYDLMGIAKLTYSRTFD-FQVYVWAALIYLLIVELIHRFIVVIERHLTRY 233 >gi|302191162|ref|ZP_07267416.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus iners AB-1] gi|309803182|ref|ZP_07697279.1| ABC transporter, permease protein [Lactobacillus iners LactinV 11V1-d] gi|308164690|gb|EFO66940.1| ABC transporter, permease protein [Lactobacillus iners LactinV 11V1-d] Length = 492 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/182 (33%), Positives = 109/182 (59%), Gaps = 4/182 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +TL I S +I +I+G +A++R+ S + + Y+ + RGTP +VQ+ +++ Sbjct: 292 GIELTLVITIFSVLIGVILGTILALMRLS-SHLALKIPAICYIELIRGTPQMVQILFVYF 350 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G+ I + +A II++ LN AY++E IRS I S+P GQ +A+ ++GL++ T R++ Sbjct: 351 GIGAIIQNMSALLAGIIAIGLNSGAYVAEDIRSGINSLPVGQAEAARSLGLSKAATYRYV 410 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCELA 196 ++PQ I L +EFI++LK +S+ S I + E Q + ++TYQ PL++ + Sbjct: 411 VIPQAIKNIWPALGNEFITLLKDSSLVSIIGVAETMYQTQLVQTSTYQGVFPLVVAMAIY 470 Query: 197 FV 198 F+ Sbjct: 471 FI 472 >gi|293192922|ref|ZP_06609766.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Actinomyces odontolyticus F0309] gi|292819978|gb|EFF78977.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Actinomyces odontolyticus F0309] Length = 320 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 118/227 (51%), Gaps = 26/227 (11%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + ++ T+ + ++ V+ + +A++R + ++ + Y+W FRGTP+ Sbjct: 55 FSRSILQGVLFTIILTILAMVVGTALAITMAIMRQSV-NPVLRWVAMAYIWFFRGTPIYT 113 Query: 73 QLF----------VIFYGLPHIG------IVFDS------FVAIIISLTLNFSAYISEII 110 QL + +G+P +G + FD+ F I L LN AY++EI+ Sbjct: 114 QLIFWSLLPTLYPKLSFGVPFLGSLWGWELTFDTATYFTPFWMAFIGLGLNEGAYLAEIM 173 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI- 169 R+ ++S+PKGQW+A+ A+G+ R R IILPQ + P+ +E IS+LK+TS+ S I Sbjct: 174 RAGLLSVPKGQWEAATALGMPRGTIFRRIILPQAMRVIVPPIGNETISMLKTTSLVSAIP 233 Query: 170 -TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 T+ F QR T+ P+ + A YL++TS IQ IE Sbjct: 234 FTLELTFIARQR-GQATFAPVPLLIAAAIWYLVITSLLMWIQSFIEK 279 >gi|154508733|ref|ZP_02044375.1| hypothetical protein ACTODO_01241 [Actinomyces odontolyticus ATCC 17982] gi|153798367|gb|EDN80787.1| hypothetical protein ACTODO_01241 [Actinomyces odontolyticus ATCC 17982] Length = 320 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 118/227 (51%), Gaps = 26/227 (11%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + ++ T+ + ++ V+ + +A++R + ++ + Y+W FRGTP+ Sbjct: 55 FSRSILQGVLFTIILTILAMVVGTALAITMAIMRQSV-NPVLRWVAMAYIWFFRGTPIYT 113 Query: 73 QLF----------VIFYGLPHIG------IVFDS------FVAIIISLTLNFSAYISEII 110 QL + +G+P +G + FD+ F I L LN AY++EI+ Sbjct: 114 QLIFWSLLPTLYPKLSFGVPFLGSLWGWELTFDTATYFTPFWMAFIGLGLNEGAYLAEIM 173 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI- 169 R+ ++S+PKGQW+A+ A+G+ R R IILPQ + P+ +E IS+LK+TS+ S I Sbjct: 174 RAGLLSVPKGQWEAATALGMPRGTIFRRIILPQAMRVIVPPIGNETISMLKTTSLVSAIP 233 Query: 170 -TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 T+ F QR T+ P+ + A YL++TS IQ IE Sbjct: 234 FTLELTFIARQR-GQATFAPVPLLIAAAIWYLVITSLLMWIQSFIEK 279 >gi|309804770|ref|ZP_07698834.1| ABC transporter, permease protein [Lactobacillus iners LactinV 09V1-c] gi|309806268|ref|ZP_07700281.1| ABC transporter, permease protein [Lactobacillus iners LactinV 03V1-b] gi|312871595|ref|ZP_07731687.1| ABC transporter, permease protein [Lactobacillus iners LEAF 3008A-a] gi|312871955|ref|ZP_07732037.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2062A-h1] gi|312873247|ref|ZP_07733303.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2052A-d] gi|312874656|ref|ZP_07734680.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2053A-b] gi|325911684|ref|ZP_08174091.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D] gi|325913019|ref|ZP_08175392.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B] gi|329921097|ref|ZP_08277620.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G] gi|308165880|gb|EFO68099.1| ABC transporter, permease protein [Lactobacillus iners LactinV 09V1-c] gi|308167252|gb|EFO69418.1| ABC transporter, permease protein [Lactobacillus iners LactinV 03V1-b] gi|311089886|gb|EFQ48306.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2053A-b] gi|311091258|gb|EFQ49646.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2052A-d] gi|311092532|gb|EFQ50894.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2062A-h1] gi|311092820|gb|EFQ51172.1| ABC transporter, permease protein [Lactobacillus iners LEAF 3008A-a] gi|325476450|gb|EGC79609.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D] gi|325477699|gb|EGC80838.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B] gi|328935004|gb|EGG31493.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G] Length = 492 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/182 (33%), Positives = 109/182 (59%), Gaps = 4/182 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +TL I S +I +I+G +A++R+ S + + Y+ + RGTP +VQ+ +++ Sbjct: 292 GIELTLVITIFSVLIGVILGTILALMRLS-SHLALKIPAICYIELIRGTPQMVQILFVYF 350 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G+ I + +A II++ LN AY++E IRS I S+P GQ +A+ ++GL++ T R++ Sbjct: 351 GIGAIIQNMSALLAGIIAIGLNSGAYVAEDIRSGINSLPVGQAEAARSLGLSKAATYRYV 410 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCELA 196 ++PQ I L +EFI++LK +S+ S I + E Q + ++TYQ PL++ + Sbjct: 411 VIPQAIKNIWPALGNEFITLLKDSSLVSIIGVAETMYQTQLVQTSTYQGVFPLVVAMAIY 470 Query: 197 FV 198 F+ Sbjct: 471 FI 472 >gi|259501631|ref|ZP_05744533.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus iners DSM 13335] gi|259166916|gb|EEW51411.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus iners DSM 13335] Length = 498 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/182 (33%), Positives = 109/182 (59%), Gaps = 4/182 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +TL I S +I +I+G +A++R+ S + + Y+ + RGTP +VQ+ +++ Sbjct: 298 GIELTLVITIFSVLIGVILGTILALMRLS-SHLALKIPAICYIELIRGTPQMVQILFVYF 356 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G+ I + +A II++ LN AY++E IRS I S+P GQ +A+ ++GL++ T R++ Sbjct: 357 GIGAIIQNMSALLAGIIAIGLNSGAYVAEDIRSGINSLPVGQAEAARSLGLSKAATYRYV 416 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCELA 196 ++PQ I L +EFI++LK +S+ S I + E Q + ++TYQ PL++ + Sbjct: 417 VIPQAIKNIWPALGNEFITLLKDSSLVSIIGVAETMYQTQLVQTSTYQGVFPLVVAMAIY 476 Query: 197 FV 198 F+ Sbjct: 477 FI 478 >gi|329939723|ref|ZP_08289024.1| putative arginine/ornithine ABC transporter permease protein [Streptomyces griseoaurantiacus M045] gi|329301293|gb|EGG45188.1| putative arginine/ornithine ABC transporter permease protein [Streptomyces griseoaurantiacus M045] Length = 308 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 125/203 (61%), Gaps = 13/203 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF----- 78 TL I+ ++ ++ L++G +AV+R+ S+ + S + FYVW FRGTP+LVQL + + Sbjct: 71 TLYISVLAMLLGLVLGVVLAVMRMS-SNPVTSTVAWFYVWFFRGTPVLVQLLLWYNIALI 129 Query: 79 YGLPHIGIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 + + ++G D F+A ++ L LN +AY+SEI+R+ I S+ GQ +AS+A+G+T Sbjct: 130 FPILNLGFYKDEMNQVMTPFLAALLGLGLNEAAYMSEIVRAGIQSVDMGQTEASHALGMT 189 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 + +T+R ++LPQ + P +EFI++LK++S+A + E+ + + I ST+ + + Sbjct: 190 QGKTLRRVVLPQAMRVIVPPTGNEFINMLKTSSLAYAVQFNELIKRSTDISSTSLAVVEL 249 Query: 192 YCELAFVYLILTSFCYIIQIKIE 214 Y + YLILTS + Q +E Sbjct: 250 YFVASIWYLILTSVFSVGQYYLE 272 >gi|329295893|ref|ZP_08253229.1| polar amino acid ABC transporter inner membrane subunit [Plautia stali symbiont] Length = 292 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/217 (32%), Positives = 119/217 (54%), Gaps = 22/217 (10%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q + +V TL ++ ++ + ++ G A++ + + ++ I Y WIFRGTPL++QL Sbjct: 70 QAILNGVVNTLIMSVLAMALGILFGVITAIMYMS-PNPVLHYIAVGYAWIFRGTPLILQL 128 Query: 75 FVIFY---GLPHIGI----------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + F P I I V F+A ++ L++N AY SE++R+ ++S+ GQ Sbjct: 129 LLWFNLALVFPTINIPGLFSVQTVTVMTPFLAALLGLSINQGAYTSEVVRAGLLSVDTGQ 188 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++A+ AIG+ R Q ++ IILPQ + P+ +EFIS++K+TS+AS I E+ AQ I Sbjct: 189 YEAAKAIGMPRLQALQRIILPQAMRVILPPVGNEFISMIKTTSLASMIQYSELLYNAQTI 248 Query: 182 VSTTYQPLIIYCELAFV----YLILTSFCYIIQIKIE 214 + + EL FV YLI+ + Q ++E Sbjct: 249 YFANARVM----ELLFVAGIWYLIIVTLLSFGQSQLE 281 >gi|319651467|ref|ZP_08005595.1| YqiY protein [Bacillus sp. 2_A_57_CT2] gi|317396782|gb|EFV77492.1| YqiY protein [Bacillus sp. 2_A_57_CT2] Length = 219 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 122/219 (55%), Gaps = 13/219 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYV 62 F + S P +L I VTL I ++ I+GF + +I FF + I+ I Y Sbjct: 5 FQQFVPSLPYIL-KGIGVTLQIVSMAG----ILGFVLGIILSFFKISRFKILGWIADAYT 59 Query: 63 WIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 +FRGTPL++QL +I+YG P IG D A ++S LN +AYISEIIR+ I+++ KGQ Sbjct: 60 SVFRGTPLVLQLMLIYYGSPQLIGYKIDPSTAAVLSFGLNSAAYISEIIRAGILAVDKGQ 119 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ A+G+ + + IILPQ + L +EFI++ K +++ + I + ++ + A + Sbjct: 120 SEAAMALGVPYRPAMMDIILPQAMKNILPALMNEFITLTKESAIVTVIGVTDVMRRAYIV 179 Query: 182 VSTT---YQPLIIYCELAFVY-LILTSFCYIIQIKIESS 216 ++P++I + ++ +ILT I+ ++ S Sbjct: 180 GGEKFSYFEPILIAGLIYYIMVMILTVLGKGIERRMRRS 218 >gi|148828331|ref|YP_001293084.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae PittGG] gi|148719573|gb|ABR00701.1| arginine ABC transporter permease protein [Haemophilus influenzae PittGG] Length = 221 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/219 (29%), Positives = 122/219 (55%), Gaps = 12/219 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI-RIFFSDTIISLIMHFYVWIFRG 67 + F L++ A ++TL +A V SLI+G F+++I ++ + M +V + RG Sbjct: 1 MFSDFLSLMFTAALMTLGLA----VCSLILGLFLSLIFSALEANRFVGKPMTVFVVLLRG 56 Query: 68 TPLLVQLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 P ++ + ++++G L I F +F +++L+L F+AY S+ +R +I +IPKG Sbjct: 57 LPEIIVVLLVYFGSTELVEMLTGEYIEFGAFGCGVLALSLIFAAYASQTLRGAIQAIPKG 116 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW++ A+GL++ T HI++PQ + LS++++ +LK T++ S I + ++ A Sbjct: 117 QWESGAALGLSKSYTFIHIVMPQVWRHALPGLSTQWLVLLKDTALVSLIGVDDLMHQADL 176 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 I + T+QP Y A +YL +T + K+E T+ Sbjct: 177 INTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTR 215 >gi|331266483|ref|YP_004326113.1| ABC transporter membrane-spanning permease-amino acid transport [Streptococcus oralis Uo5] gi|326683155|emb|CBZ00773.1| ABC transporter membrane-spanning permease-amino acid transport [Streptococcus oralis Uo5] Length = 213 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/160 (35%), Positives = 90/160 (56%), Gaps = 1/160 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ Y+W+ RGTPLL+QL I+Y LP IGI D A +I+ LN++AY +EI R I + Sbjct: 50 LIDLYIWVMRGTPLLLQLIFIYYVLPSIGIRLDRLPAAVIAFVLNYAAYFAEIFRGGIET 109 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQ++A+ + + T+R+IILPQ + +E +S++K TS+ + I ++ Sbjct: 110 IPKGQYEAAKVLKFSPFSTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLI- 168 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 A R + L+ +YLI+ I+ K+E Sbjct: 169 LASRTAANRDASLVPMFLAGAIYLIMIGLVTIVAKKLEKK 208 >gi|309809954|ref|ZP_07703802.1| ABC transporter, permease protein [Lactobacillus iners SPIN 2503V10-D] gi|308169742|gb|EFO71787.1| ABC transporter, permease protein [Lactobacillus iners SPIN 2503V10-D] Length = 422 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/182 (33%), Positives = 109/182 (59%), Gaps = 4/182 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +TL I S +I +I+G +A++R+ S + + Y+ + RGTP +VQ+ +++ Sbjct: 222 GIELTLVITIFSVLIGVILGTILALMRLS-SHLALKIPAICYIELIRGTPQMVQILFVYF 280 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G+ I + +A II++ LN AY++E IRS I S+P GQ +A+ ++GL++ T R++ Sbjct: 281 GIGAIIQNMSALLAGIIAIGLNSGAYVAEDIRSGINSLPVGQAEAARSLGLSKAATYRYV 340 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCELA 196 ++PQ I L +EFI++LK +S+ S I + E Q + ++TYQ PL++ + Sbjct: 341 VIPQAIKNIWPALGNEFITLLKDSSLVSIIGVAETMYQTQLVQTSTYQGVFPLVVAMAIY 400 Query: 197 FV 198 F+ Sbjct: 401 FI 402 >gi|299067959|emb|CBJ39173.1| glutamate/aspartate transport protein; ABC superfamily, membrane component [Ralstonia solanacearum CMR15] Length = 242 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 110/197 (55%), Gaps = 11/197 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + +T+ + S++I+L++G + V+R S + L YV +FR PL+VQLF+ Sbjct: 24 LLSGLKITIALGLSSWIIALVLGSVLGVLRTVPSKALSGLATA-YVELFRNIPLIVQLFI 82 Query: 77 IFYGLPHIGIVFD----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 ++ +P + D F+ ++ L +A + E +RS I S+P+GQ +A Sbjct: 83 WYFVMPELVPGGDYIKQMNPATAMFLCAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGL 142 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G T QT RH++LP PL+SEF++I K+++VASTI + E+ +++V T Sbjct: 143 AMGFTLAQTYRHVMLPMAFRIIVPPLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTA 202 Query: 187 QPLIIYCELAFVYLILT 203 QP + + +Y+++ Sbjct: 203 QPYESFIAVTLMYMLIN 219 >gi|161619872|ref|YP_001593759.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella canis ATCC 23365] gi|161336683|gb|ABX62988.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365] Length = 281 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 122/209 (58%), Gaps = 12/209 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMHFYVWIFRG 67 +FPQLL AI L I+ I+ +++LI G + ++R I + +I +++ F RG Sbjct: 72 GAFPQLL-PAIGTNLVISIIAMILALIGGTALTILRTLGIAPLNAVIGVVISF----IRG 126 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TP+LVQ+F+ +YGLP +G+ A I+++ N S +I+EI+R + + G +A+ A Sbjct: 127 TPILVQIFLFYYGLPALGLDLSPIQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIA 186 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ K +ILPQ PL +E +I+K T++ S IT+ E+ +TAQ++ + +++ Sbjct: 187 LGIKGKVIWTKVILPQLYIRIMPPLVNELTTIVKGTALLSVITVVEVLRTAQQVANASFR 246 Query: 188 PL-IIYCE---LAFVYLILTSFCYIIQIK 212 PL + C L V L+L+ +++++ Sbjct: 247 PLETLLCAAIILFAVNLVLSQCGRVLEMR 275 >gi|163802096|ref|ZP_02195992.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4] gi|159174237|gb|EDP59045.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4] Length = 225 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LI++S P L + T+ + I+ VI L+I +A+ R + ++SL +++ F Sbjct: 3 FSLIVESLPIYL-DGLWTTVWLVAIALVIGLVISIPLAIARNS-ENYVLSLPSWAFIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I +P G Sbjct: 61 RGTPLLVQLYLIYYGMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPSG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G+++ T R IILP + + S+E I +L ++VA ITI ++ A+ Sbjct: 121 EVEAAKAYGMSKFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIITIMDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + + Y P + Y+ LT Sbjct: 181 VNARYYAPFESFLAAGLFYMALT 203 >gi|302189421|ref|ZP_07266094.1| putative ABC transport system, ATP-binding protein [Pseudomonas syringae pv. syringae 642] Length = 506 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 133/232 (57%), Gaps = 17/232 (7%) Query: 1 MKYEW---FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI 57 M ++W F L D+ + A + ++ +++VIS+++GF +A+ + S +I+L Sbjct: 1 MTFDWKYMFGLFSDTE---FWMATWTVIQLSVLTWVISIVLGFILALAKQS-SLPLINLP 56 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRS 112 Y+W+FR PLLV L + Y LP ++ + F A +I++ + +AY++EI R Sbjct: 57 AKAYIWLFRSLPLLV-LLIFVYNLPQAVPATSAVLANPFWAGLIAMVMCETAYVAEIHRG 115 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 ++SI KGQ +A+ A+GL T I++PQ + + L++E+ISI+K +S+ S I++ Sbjct: 116 GLLSIAKGQTEAARALGLRFVGTQWRIVIPQALRVALPSLTNEYISIVKLSSLVSVISLT 175 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVY-LILTSFCYIIQIKIES--SVTQHT 221 EI QR+ S + + +AF Y LI+T F ++++ ++E VTQH Sbjct: 176 EILMVGQRLYSQNFLVMETMAAVAFYYVLIVTVFDFLLK-RLERYLDVTQHK 226 >gi|227514517|ref|ZP_03944566.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum ATCC 14931] gi|227087074|gb|EEI22386.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum ATCC 14931] Length = 224 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 102/176 (57%), Gaps = 6/176 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVW 63 F I++ P L A +TL + + + SL +G ++ + + I L ++ YVW Sbjct: 12 FKYIMEILPSLFQGA-GLTLQLFFWTLIGSLPLGI---IVSLGLTSKIKPLKWVLEMYVW 67 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTPLL+QL +FYGLP IGIVF + A +++ LN++AY +EI R + SI +GQ++ Sbjct: 68 LMRGTPLLLQLIFVFYGLPIIGIVFQRYDAALVAFILNYAAYFAEIFRGGLQSISQGQYE 127 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 + + L+ QT+R I++PQ + + +E I+++K +S+ I + ++ + Sbjct: 128 GARVLRLSYWQTVRKIVIPQVVKIVIPSIGNEVINLIKDSSLVYVIGLGDLLRAGN 183 >gi|260461008|ref|ZP_05809257.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259033042|gb|EEW34304.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 221 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/188 (32%), Positives = 104/188 (55%), Gaps = 1/188 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 LL + T+ +A +S + IG AV R F +S + YV + R TPLL+QL Sbjct: 15 DLLLRGLEKTIQLAALSILFGTAIGILGAVGRSF-GPRFLSWTIAAYVELIRNTPLLIQL 73 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 + +F+ LP G S +A +++L+++ AY +EI+R+ I +IP+GQ +A+ ++GL R + Sbjct: 74 YFVFFSLPLFGFKLSSNMAAVVALSIHLGAYATEILRAGIEAIPEGQIEAAKSLGLGRYR 133 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 IRH++L LS++FI + TS+ I E+ A +V T++ +Y Sbjct: 134 IIRHVVLVPAARAVYPSLSAQFILQIMGTSIVGAIAAEELTAVANNLVMQTFRSFEVYIV 193 Query: 195 LAFVYLIL 202 +A +Y +L Sbjct: 194 IAIIYFVL 201 >gi|322391787|ref|ZP_08065252.1| amino acid ABC superfamily ATP binding cassette transporter [Streptococcus peroris ATCC 700780] gi|321145267|gb|EFX40663.1| amino acid ABC superfamily ATP binding cassette transporter [Streptococcus peroris ATCC 700780] Length = 481 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 124/220 (56%), Gaps = 10/220 (4%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+ +++ QLL + +TL +A +SF I++ IG + + ++ LI +V + Sbjct: 264 W-GLLKNNYKQLLNG-LGITLALALLSFTIAIFIGIIFGMFSVSPYKSL-RLISEIFVDV 320 Query: 65 FRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 RG PL++ IF+G+P+ + FVA I+L+LN +AYI+EI+R I ++ Sbjct: 321 IRGIPLMILAAFIFWGIPNFIESLTGQQSPINDFVAGTIALSLNSAAYIAEIVRGGIKAV 380 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +AS ++G++ +T+R I+LPQ ++F+ LK T++ S I + E+FQT Sbjct: 381 PVGQMEASRSLGISYGKTMRKIVLPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQT 440 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + I++ YQ +Y LA YL++ + + ++E + Sbjct: 441 GKIIIARNYQSFKMYAILAVFYLVIITLLTRLAKRLEKRI 480 >gi|321312271|ref|YP_004204558.1| glutamine ABC transporter permease [Bacillus subtilis BSn5] gi|320018545|gb|ADV93531.1| glutamine ABC transporter (permease) [Bacillus subtilis BSn5] Length = 218 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/174 (37%), Positives = 101/174 (58%), Gaps = 5/174 (2%) Query: 10 IDSFPQ----LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ID++ Q L+ +VTL +A IS ++S G +R + ++S ++ V Sbjct: 4 IDAYSQEHLAFLWDGFLVTLYVAFISIILSFFFGLIAGTLR-YAKVPVLSQLIAVLVETI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R PLL+ +F F+ LP IGI + A I +LT+ SA +SEIIRS + SI KGQ +A+ Sbjct: 63 RNLPLLLIIFFTFFALPEIGIKLEITAAAITALTIFESAMLSEIIRSGLKSIDKGQIEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 + GL+ QT+ I++PQ + P+ S+FIS+LK TS+A I +PE+ AQ Sbjct: 123 RSSGLSYTQTLFFIVMPQALRRMVPPIVSQFISLLKDTSLAVVIALPELIHNAQ 176 >gi|262275665|ref|ZP_06053474.1| amino acid ABC transporter permease protein 3-TM region His/Glu/Gln/Arg/opine [Grimontia hollisae CIP 101886] gi|262219473|gb|EEY70789.1| amino acid ABC transporter permease protein 3-TM region His/Glu/Gln/Arg/opine [Grimontia hollisae CIP 101886] Length = 222 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 123/222 (55%), Gaps = 9/222 (4%) Query: 3 YEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGF-FIAVIRI--FFSDTIISLIM 58 ++W + ++ + P+L+ AA TL A + +++++G F+ + R F + + ++ Sbjct: 2 FDWQWTVVWEVLPRLI-AATGNTLIAAGAGYAVAMVLGLVFMLLQRTPSAFLNRFVRELV 60 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 F R TPL++Q+F +FY P IG+ D + A +I++ L+++AY+SE+ R + S+ Sbjct: 61 EF----IRSTPLILQIFFVFYVGPQIGLFLDPWAAGLIAIGLHYAAYLSEVYRGGLESVD 116 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQW+A+ A+ ++ +T I+LPQ + S + + + I K T + S I + E+ TA Sbjct: 117 KGQWEAAKALNMSTFKTYSRIVLPQALPPSLAGMGNYLVGIFKDTPMLSVIGVAELMHTA 176 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I S +Y+ L + + ++L+++ ++ E V Q Sbjct: 177 NAIGSESYRFLEPFTLVGVIFLVISLPTSLLMRVTERKVRQK 218 >gi|56962547|ref|YP_174273.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16] gi|56908785|dbj|BAD63312.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16] Length = 217 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/169 (40%), Positives = 101/169 (59%), Gaps = 3/169 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ VTL +A I+ + S ++G + ++R + + S ++ V I R PLL+ LF Sbjct: 15 LWEGFQVTLLLALIAIICSYVVGIVLGILR-YAKIPVFSRVLGAAVDIIRCLPLLLILFF 73 Query: 77 I-FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 F LP +G FVA I++LT+ A ISEIIRS + SIPKGQ +A+ + GLT QT Sbjct: 74 THFVLLPELGFQVSPFVAAIVALTVFEGAMISEIIRSGLNSIPKGQIEAARSSGLTYTQT 133 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +R I++PQ P S+FI++LK TS+A IT+PE+ A RI+S Sbjct: 134 LRAILIPQAARKMMPPTVSQFIALLKDTSLAVIITLPEVMHHA-RILSA 181 >gi|254508516|ref|ZP_05120634.1| ABC-type arginine/histidine transport system, permease component [Vibrio parahaemolyticus 16] gi|219548541|gb|EED25548.1| ABC-type arginine/histidine transport system, permease component [Vibrio parahaemolyticus 16] Length = 225 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 111/203 (54%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LI++S P L + T+ + C++ VI L++ + V R IS +++ F Sbjct: 3 FSLIVESLPVYL-EGLWTTVWLVCLALVIGLVVAIPLGVARNS-QSYFISGPSWAFIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLL+QL++I+YG+ V D ++ +++ LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLIQLYLIYYGMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G++ T R IILP + + S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMSHFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIVDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFESFLTAGLFYMALT 203 >gi|186473893|ref|YP_001861235.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184196225|gb|ACC74189.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 250 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/152 (35%), Positives = 93/152 (61%), Gaps = 9/152 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIR 111 Y+ +FRG+PLL+Q+F+++YGL G++ +SF V ++SL L + Y +EIIR Sbjct: 58 YILVFRGSPLLIQMFLVYYGLGQFGVIRESFLWPVLREPYVCAVLSLALCTAGYTAEIIR 117 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++++P GQ +A Y+IGL+ +R II P + S+E + ++KST++AS +T+ Sbjct: 118 GGLMAVPVGQIEAGYSIGLSGFSLLRRIIGPIALRQCLPAYSTEAVLLVKSTALASLVTV 177 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+ AQ+I+ TY+ ++ A +YL L Sbjct: 178 WEVTGVAQQIIQQTYRTTEVFICAALIYLFLN 209 >gi|152983662|ref|YP_001349725.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Pseudomonas aeruginosa PA7] gi|150958820|gb|ABR80845.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Pseudomonas aeruginosa PA7] Length = 218 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/177 (32%), Positives = 102/177 (57%), Gaps = 8/177 (4%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI---FFSDTIISLIMHFYVWIFRGTPL 70 PQLL+A++ T+ I + F ++++ G A+ R F+ ++ ++ F R TPL Sbjct: 14 PQLLHASLK-TVGITLVGFTLAMVFGLLFAMARRSRHFWLSWPVAWLIEF----IRSTPL 68 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L+Q++ +FY LP G+ S VA + + L+++ Y +E+ R+ + S+P+GQW+A A+ Sbjct: 69 LIQVYFLFYVLPSYGLSMTSLVAGTLGIALHYACYTAEVYRAGLDSVPRGQWEAVTALNF 128 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 + + R +ILPQ I L + I++ K T V S IT+ EI Q A+ + S +++ Sbjct: 129 SPWRAYRQVILPQAIRPVLPALGNYLIAMFKDTPVLSAITVVEIMQQAKNVGSDSFR 185 >gi|116629194|ref|YP_814366.1| ABC-type amino acid transport system, permease component [Lactobacillus gasseri ATCC 33323] gi|238853887|ref|ZP_04644250.1| ABC-type amino acid transport system, permease component [Lactobacillus gasseri 202-4] gi|282851027|ref|ZP_06260401.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] gi|311111028|ref|ZP_07712425.1| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus gasseri MV-22] gi|116094776|gb|ABJ59928.1| amino acid ABC transporter membrane protein 2, PAAT family [Lactobacillus gasseri ATCC 33323] gi|238833473|gb|EEQ25747.1| ABC-type amino acid transport system, permease component [Lactobacillus gasseri 202-4] gi|282557979|gb|EFB63567.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] gi|311066182|gb|EFQ46522.1| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus gasseri MV-22] Length = 216 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 116/200 (58%), Gaps = 8/200 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W N I Q L+ I V+L +SF++ L+ GF I ++I + +S ++ F + Sbjct: 8 YSWIN--IRFLLQGLWVTIYVSLISIALSFILGLVFGF-IRYVKIKY----LSAVVGFVI 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP +GIV + VA II+L + A ++EI+RS I ++ GQ Sbjct: 61 DIIRNLPLLLIIFFTYFGLPELGIVTNPTVASIIALVVFEGAMLAEIVRSGIAAVDPGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + G+T Q + H+I+PQ + L S+F+S++K TS+A+ I +PE+ AQ I Sbjct: 121 EGARSNGMTYMQAMYHVIIPQALNKMIPSLLSQFVSLVKDTSLATIIVLPELLFHAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLI 201 S LI +Y +A +Y I Sbjct: 181 SQNTTYLIPMYVIIAIMYFI 200 >gi|148559776|ref|YP_001259773.1| amino acid ABC transporter permease [Brucella ovis ATCC 25840] gi|256370355|ref|YP_003107866.1| amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|148371033|gb|ABQ61012.1| amino acid ABC transporter, permease protein [Brucella ovis ATCC 25840] gi|256000518|gb|ACU48917.1| amino acid ABC transporter, permease protein [Brucella microti CCM 4915] Length = 281 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 122/209 (58%), Gaps = 12/209 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMHFYVWIFRG 67 +FPQLL AI L I+ I+ +++LI G + ++R I + +I +++ F RG Sbjct: 72 GAFPQLL-PAIGTNLVISIIAMILALIGGTALTILRTLGIAPLNAVIGVVISF----IRG 126 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TP+LVQ+F+ +YGLP +G+ A I+++ N S +I+EI+R + + G +A+ A Sbjct: 127 TPILVQIFLFYYGLPALGLDLSPIQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIA 186 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ K +ILPQ PL +E +I+K T++ S IT+ E+ +TAQ++ + +++ Sbjct: 187 LGIKGKVIWTKVILPQLYIRIMPPLVNELTTIVKGTALLSVITVVEVLRTAQQVANASFR 246 Query: 188 PL-IIYCE---LAFVYLILTSFCYIIQIK 212 PL + C L V L+L+ +++++ Sbjct: 247 PLETLLCAAIILFAVNLVLSQCGRVLEMR 275 >gi|116248756|ref|YP_764597.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|241113599|ref|YP_002973434.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|115253406|emb|CAK11794.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|240861807|gb|ACS59473.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 219 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 50/146 (34%), Positives = 90/146 (61%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + +Y+ +F+GTPLL+QLF+ F+GL GI +++A +L L +A+++EI R + + Sbjct: 52 VAKYYIELFQGTPLLMQLFIAFFGLGLFGIDVPAWLAAGFALILWSAAFLAEIWRGCVEA 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + KGQW+AS ++G+ R Q +R++ILPQ + + P + I+K T++ S I E+ + Sbjct: 112 VVKGQWEASASLGMGRLQQMRYVILPQALRVAIPPTVGFSVQIVKGTALTSIIGFVELSK 171 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLIL 202 + + T+QP +Y +A +Y L Sbjct: 172 AGTVVTNATFQPFTVYGLVALIYFAL 197 >gi|119383036|ref|YP_914092.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Paracoccus denitrificans PD1222] gi|119372803|gb|ABL68396.1| hydroxyectoine ABC transporter membrane protein / ectoine ABC transporter membrane protein [Paracoccus denitrificans PD1222] Length = 218 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/202 (30%), Positives = 108/202 (53%), Gaps = 1/202 (0%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ + + ++L++ F + RI + + Y+ FRGT + VQLF I++ LP Sbjct: 17 VTVKLTLMGSALALVVAFVAGLGRIS-RHAAVRWLATAYIEFFRGTSIFVQLFWIYFVLP 75 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 G A +++L LN AY +E++R +I+++P+ Q +A A+ LTR Q +RHIILP Sbjct: 76 MTGAELTPMQAGVMALGLNVGAYGAEVVRGAILAVPRDQHEACVAVNLTRFQRMRHIILP 135 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + + I +LK+TSV S I++ ++ AQ + S T L+ + + +Y + Sbjct: 136 QALPLMLPTFGNNAIELLKATSVVSLISLSDMTFQAQVVRSQTGSTLMPFVTILLLYFAM 195 Query: 203 TSFCYIIQIKIESSVTQHTYSV 224 +S ++E VT+ V Sbjct: 196 SSALSFGMRRLERRVTRGLDGV 217 >gi|56807700|ref|ZP_00365576.1| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Streptococcus pyogenes M49 591] Length = 401 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 126/219 (57%), Gaps = 9/219 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L+ +++ QLL A + TL + ISF I++IIG ++ + + ++ LI +V + R Sbjct: 185 GLLSNNYKQLL-AGLGTTLSLTLISFAIAIIIGIIFGMMAVSPTKSL-RLISTVFVDVVR 242 Query: 67 GTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 G PL++ IF+G+P++ + F+A I+L+LN AYI+EI+R I ++P Sbjct: 243 GIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGGAYIAEIVRGGIEAVPA 302 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +AS ++GL+ T+R +ILPQ + ++F+ LK T++ S I + E+FQT + Sbjct: 303 GQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGK 362 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 I++ YQ +Y LA +YLI+ + + ++E + Sbjct: 363 IIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRLN 401 >gi|315178664|gb|ADT85578.1| ABC-type amino acid transport system permease component [Vibrio furnissii NCTC 11218] Length = 245 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 117/212 (55%), Gaps = 15/212 (7%) Query: 2 KYEWFNLIIDSFPQ-------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII 54 +Y+W ++D F L A TL ++ +S V+++ +G +A+ + T+ Sbjct: 19 QYQWGWYVLDPFTAQGVRNLTFLIAGFGDTLSLSLLSMVLAMGLGLMVALPALSPRRTLR 78 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD----SFVAIIISLTLNFSAYISEII 110 YV + R PLLV L I+YGLP ++FD F A +++L+L SA+++E+ Sbjct: 79 Q-ANRVYVEVVRAIPLLVLLLWIYYGLP---VLFDLSLNHFTAGVMALSLAESAFMAEVF 134 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R I +I +GQ +A+ A+GL Q +R +ILPQ + PL ++FI ILK +S+ S I Sbjct: 135 RGGIQAIDRGQHEAAQALGLRDWQKMRLVILPQALRHILPPLGNQFIYILKMSSLVSVIG 194 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + ++ + A +V T Y PL IY L YLIL Sbjct: 195 LSDLTRRANELVVTEYLPLEIYTFLVLEYLIL 226 >gi|268319123|ref|YP_003292779.1| ABC transporter permease component [Lactobacillus johnsonii FI9785] gi|262397498|emb|CAX66512.1| ABC transporter permease component [Lactobacillus johnsonii FI9785] Length = 497 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/146 (36%), Positives = 92/146 (63%), Gaps = 6/146 (4%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ RGTP +VQ+ +++G+ ++ + VA II++ LN AY++E IRS I S+PKG Sbjct: 335 YIEFIRGTPQMVQILFVYFGIGYLISNLSALVAGIIAIGLNSGAYVAEDIRSGIDSLPKG 394 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++GL+R++ R++I+PQ I L +EFI++LK +S+ S I + E+ Q Sbjct: 395 QMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNEFITLLKDSSLVSVIGVAELMYQTQL 454 Query: 181 IVSTTYQ---PLIIYCELAFVYLILT 203 + ++TY+ PL I +Y I+T Sbjct: 455 VQTSTYKGVLPLFIAM---IIYFIMT 477 >gi|209547731|ref|YP_002279648.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533487|gb|ACI53422.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 219 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 94/149 (63%), Gaps = 3/149 (2%) Query: 54 ISLIMHF---YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEII 110 ++ + HF YV + RG PLL LF++++GLP IGIVFD+F A + L L F+A I+E+ Sbjct: 52 LAALRHFAALYVTVVRGVPLLAVLFLLYFGLPGIGIVFDAFGAALAGLALCFAAQIAELF 111 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R+ + +IP GQ +A+ A+GLT Q+ R II PQ + P+ F+++LK +S+AS IT Sbjct: 112 RAGLKAIPAGQGEAALAVGLTPVQSFRLIIFPQVVRVILAPMIVTFVALLKDSSLASLIT 171 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 + E+ T + + + + PL IY + Y Sbjct: 172 VNELVLTGRAMATEYFLPLQIYVAVGLCY 200 >gi|163841189|ref|YP_001625594.1| glutamine transport permease protein [Renibacterium salmoninarum ATCC 33209] gi|162954665|gb|ABY24180.1| glutamine transport permease protein [Renibacterium salmoninarum ATCC 33209] Length = 357 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 109/184 (59%), Gaps = 3/184 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 +++L++ S P LL + + TL + ISF ++++G F +++ + ++ + +V I Sbjct: 144 FWDLVVQSMPALL-SGLGNTLLVTVISFAFAMLLGLFFGFLKVS-QNIVLRGVATTFVNI 201 Query: 65 FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTPLLVQ F ++G+P + G + +VA +++L LN AY++EI+R + S+ GQ + Sbjct: 202 FRGTPLLVQAFFFYFGIPQLTGQPINIWVAGVLTLALNSGAYVTEIVRGGLQSVDPGQLE 261 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AS ++GL ++R +++PQ L ++ + +LK +S+ I E+ Q+I S Sbjct: 262 ASRSLGLGYLTSMRKVVVPQAFKIMTPSLINQLVILLKDSSLLMAIGFAELLYQGQQIYS 321 Query: 184 TTYQ 187 +++ Sbjct: 322 NSFR 325 >gi|78355230|ref|YP_386679.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217635|gb|ABB36984.1| amino acid ABC transporter membrane protein 2, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 225 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 120/215 (55%), Gaps = 6/215 (2%) Query: 8 LIIDSF--PQL---LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 L++DSF QL L ++++ + S ++ + G + +R+F S + IM+ Y Sbjct: 2 LVLDSFYTDQLFPALNRGLLMSFLLIVPSALLGQLTGIAVGTLRVFGSAPVKK-IMNAYT 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +FRG PL+VQLFV+++GLP++GI + + A + L AY SE +R +++SI +GQ Sbjct: 61 AVFRGVPLMVQLFVLYFGLPNVGIYLEPYTAALAGFVLCSGAYNSEYVRGALLSIRQGQI 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A+ A+G+++ +TI I++PQ + +E I ++K +S+A IT E+ A+ + Sbjct: 121 KAAQALGMSKFKTIFWIVIPQAFRRALPGCGNEVIYLIKYSSLAYIITCIELTGEARAVA 180 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + T++ + + YL L + I K+E + Sbjct: 181 TKTFRFTEAFMVVGMYYLALVTVATWILDKLEQRL 215 >gi|256828614|ref|YP_003157342.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] gi|256577790|gb|ACU88926.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] Length = 222 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 112/201 (55%), Gaps = 1/201 (0%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E F +++ L ++V+L + S ++ + G + R F ++ + + Y Sbjct: 3 EEFIFLLERLVPALNKGVLVSLQLIVPSAILGIFFGVVVGACRAF-GGGVLRALANGYAA 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 +FRGTPL++QLF++++GLP++GI F + A ++ TL +AY SE IR ++SI +GQ Sbjct: 62 LFRGTPLVIQLFILYFGLPNVGIYFQPYTAAVLGFTLCSAAYHSEYIRGGLLSIKRGQVL 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+G + T+ II+PQ + +E + ++K +S+A IT E+ A+ + S Sbjct: 122 AAQALGFSTFTTLIWIIIPQAFRRALPGCGNEIVYLIKYSSLAYVITCFELTGQAKIVAS 181 Query: 184 TTYQPLIIYCELAFVYLILTS 204 +++ ++ + YLIL S Sbjct: 182 ESFRFSEVFMVVGVYYLILVS 202 >gi|145641226|ref|ZP_01796806.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae R3021] gi|145274063|gb|EDK13929.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae 22.4-21] Length = 221 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/219 (29%), Positives = 122/219 (55%), Gaps = 12/219 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI-RIFFSDTIISLIMHFYVWIFRG 67 + F L++ A ++TL +A V SLI+G F+++I ++ + M +V + RG Sbjct: 1 MFSDFLSLMFTAALMTLGLA----VCSLILGLFLSLIFAALEANRFVGKPMTVFVVLLRG 56 Query: 68 TPLLVQLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 P ++ + ++++G L I F +F +++L+L F+AY S+ +R +I +IPKG Sbjct: 57 LPEIIVVLLVYFGSTELVEMLTGEYIEFGAFGCGVLALSLIFAAYASQTLRGAIQAIPKG 116 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW++ A+GL++ T HI++PQ + LS++++ +LK T++ S I + ++ A Sbjct: 117 QWESGAALGLSKSYTFIHIVMPQVWRHALPGLSTQWLVLLKDTALVSLIGVDDLMHQADL 176 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 I + T+QP Y A +YL +T + K+E T+ Sbjct: 177 INTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTR 215 >gi|288961242|ref|YP_003451581.1| polar amino acid transport system permease protein [Azospirillum sp. B510] gi|288913550|dbj|BAI75037.1| polar amino acid transport system permease protein [Azospirillum sp. B510] Length = 243 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 105/182 (57%), Gaps = 13/182 (7%) Query: 35 SLIIGFFIAVIRIFFSDTIISLI---MHFYVWIFRGTPLLVQLFVIFYGLPH-------I 84 S+++G A++ + ++L+ YV++FRGTPLL+QLF+I+YGL + Sbjct: 27 SILLGGAGALVLALMRTSGVALLSAPARAYVFVFRGTPLLIQLFMIYYGLGQFRPALQEL 86 Query: 85 GI---VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 G+ D + ++++ +N +AY SEIIR + S+P G +A+ A G+ +R I+L Sbjct: 87 GLWSFFRDPYWCAVLAMAMNTAAYSSEIIRGGLNSVPPGALEAASACGMRPLMRLRRIVL 146 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 P I + +E + + K+TS+ASTIT+ E+ A ++++ TY+ + I+ +YL Sbjct: 147 PLAIRQALPAYGNELVLMAKATSLASTITLMEVTGLAGKMIAQTYRAVEIFACAGIIYLA 206 Query: 202 LT 203 LT Sbjct: 207 LT 208 >gi|188591217|ref|YP_001795817.1| glutamate/aspartate transporter; ABC superfamily, membrane component [Cupriavidus taiwanensis LMG 19424] gi|170938111|emb|CAP63097.1| glutamate/aspartate transport protein; ABC superfamily, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 242 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 111/205 (54%), Gaps = 18/205 (8%) Query: 1 MKYEW-FNLIIDSFPQ------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI 53 M Y W + + ++ Q + + + VTL + S+VI+L+IG + V+R + Sbjct: 1 MNYNWHWGVFLEQAAQNETYLDWMISGLKVTLALGLSSWVIALVIGSVLGVLRTV-PNKW 59 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLP----------HIGIVFDSFVAIIISLTLNFS 103 ++ I YV IFR PLLVQLF+ ++ +P + F+A ++ L + Sbjct: 60 LAGIAATYVEIFRNIPLLVQLFIWYFVMPELLPGGEAIKQMNPFAQQFLAAMLCLGTFTA 119 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 A + E +RS I S+ +GQ +A A+G T QT RH++LP PL+SEF++I K++ Sbjct: 120 ARVCEQVRSGINSLARGQKNAGLAMGFTLPQTYRHVLLPMAFRVIVPPLTSEFLNIFKNS 179 Query: 164 SVASTITIPEIFQTAQRIVSTTYQP 188 +VASTI + E+ +++V T +P Sbjct: 180 AVASTIGLLELAAQGRQLVDYTARP 204 >gi|319782447|ref|YP_004141923.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168335|gb|ADV11873.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 224 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 102/171 (59%), Gaps = 4/171 (2%) Query: 37 IIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIII 96 ++GF + ++R + +IS ++ +V + RGTP LVQ+F+IF+ LP GI D+F A II Sbjct: 36 LLGFALGILRTG-GNRLISGLIGAWVDLIRGTPFLVQIFLIFFILPEFGIELDAFTAGII 94 Query: 97 SLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF 156 +LT + +I EI+ + I S+P GQ +A+ A GL+R Q +R ++LPQ + PL ++ Sbjct: 95 ALTNLAACFICEIVVAGIRSVPTGQVEAALASGLSRWQRMRQVVLPQAMRIVLPPLVGQY 154 Query: 157 ISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + ++K +SV S I + ++ + +V L+++ + Y I+ CY Sbjct: 155 VLLIKDSSVVSAIGLTDLTRVGWLVVQRVPNGLLVFFLVGAGYFIV---CY 202 >gi|292487757|ref|YP_003530630.1| glutamine ABC transporter inner membrane protein [Erwinia amylovora CFBP1430] gi|292898986|ref|YP_003538355.1| glutamine ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291198834|emb|CBJ45944.1| glutamine ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291553177|emb|CBA20222.1| glutamine ABC transport system, inner membrane component [Erwinia amylovora CFBP1430] gi|312171871|emb|CBX80128.1| glutamine ABC transport system, inner membrane component [Erwinia amylovora ATCC BAA-2158] Length = 219 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 124/220 (56%), Gaps = 5/220 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P LL A +TL I+ + V ++IG R + + I Sbjct: 1 MQFDW-SAIWPAIPILLEGA-RMTLLISVLGLVGGVLIGLVAGFARAY-GGWLSRNIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIELIRGTPIVVQVMFIYFALPMAFTDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIN 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +G +A A+GL+ ++T+R++I+P + PL +++I +K TS+ I + E+ + Sbjct: 118 RGFREAGLALGLSSRETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 Q I++ ++ L I+ +A +YLI+T + ++E + Sbjct: 178 QEIIAGNFRALEIWSAVAVIYLIITLVLSFVLRRLERRMK 217 >gi|25028000|ref|NP_738054.1| putative amino acid ABC transporter permease protein [Corynebacterium efficiens YS-314] gi|23493283|dbj|BAC18254.1| putative amino acid ABC transporter permease protein [Corynebacterium efficiens YS-314] Length = 240 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 116/206 (56%), Gaps = 27/206 (13%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 +S +I ++ G +AV+R+ + ++ + Y+WIFRGTP+ VQL +F+GL +G ++ Sbjct: 2 LSMIIGVVFGATLAVMRMS-GNPVLQGVAWLYLWIFRGTPIYVQL--VFWGL--LGSLYQ 56 Query: 90 S-----------------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 + F+ ++ L LN +AY++EI+RS I ++P+GQ +AS A+G+ Sbjct: 57 TVNLGFAEIDLQNFLSNMFILAVLGLGLNEAAYMAEIVRSGIQAVPEGQMEASKALGMGW 116 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP---EIFQTAQRIVSTTYQPL 189 T+R +LPQ + P +E IS+LK+TS+ + +P E++ + I + ++P+ Sbjct: 117 SLTMRRTVLPQAMRIIIPPTGNELISMLKTTSL--VVAVPYSLELYGRSMDIAYSLFEPV 174 Query: 190 IIYCELAFVYLILTSFCYIIQIKIES 215 + A YL++TS + Q +E Sbjct: 175 PMLLVAATWYLVITSVLMVGQYYLEK 200 >gi|256831907|ref|YP_003160634.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Jonesia denitrificans DSM 20603] gi|256685438|gb|ACV08331.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Jonesia denitrificans DSM 20603] Length = 251 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/172 (31%), Positives = 97/172 (56%), Gaps = 8/172 (4%) Query: 6 FNLIIDSFPQLLYA---AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 F + D+ PQ+L +++TL A ++ V+++ +G F + ++ ++ Sbjct: 14 FTALRDALPQILDGMGITLLLTLGGASLALVVAVALGLLAR-----FDNVLVRGTARVFI 68 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FRGT L+VQLF +F+ LP G+ + I +L LN+ AY +E++R SI S+P+GQW Sbjct: 69 EFFRGTSLVVQLFWLFFVLPRFGVELPALAVGIAALGLNYGAYGAEVVRGSINSVPQGQW 128 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +A+ A+ L+R Q + II PQ L++ I +LK T++ S I + ++ Sbjct: 129 EATTALSLSRTQRMWRIIFPQAWALMIPSLTNLLIQLLKGTAIVSIIAMADL 180 >gi|229019366|ref|ZP_04176190.1| Arginine transport system permease protein artQ [Bacillus cereus AH1273] gi|229025612|ref|ZP_04182019.1| Arginine transport system permease protein artQ [Bacillus cereus AH1272] gi|228735706|gb|EEL86294.1| Arginine transport system permease protein artQ [Bacillus cereus AH1272] gi|228741934|gb|EEL92110.1| Arginine transport system permease protein artQ [Bacillus cereus AH1273] Length = 225 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 119/215 (55%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I S + I+G +A+ +I + ++ Y IF Sbjct: 11 FSAITPSIPYIL-KGLEVTLKIVAASALAGFILGTLLALCKIARIRAL-NIAADIYTSIF 68 Query: 66 RGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P IG +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 69 RGTPLVLQLMIIYFGVPQMIGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 128 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +R+II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 129 AMALGIPYSKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 188 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y IL ++ IE + + Sbjct: 189 TFKYLEPLLFVGLIYYILVIILTLVGKAIEGRMKK 223 >gi|269120912|ref|YP_003309089.1| polar amino acid ABC transporter inner membrane subunit [Sebaldella termitidis ATCC 33386] gi|268614790|gb|ACZ09158.1| polar amino acid ABC transporter, inner membrane subunit [Sebaldella termitidis ATCC 33386] Length = 265 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 15/195 (7%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---- 60 W I+ + + TL I+ ++ IG +A++R + D +I F Sbjct: 14 WVAFFIEKNGNQFLSGTITTLYISLTGTIVGFFIGLCVALVREAYIDEKTPVIKKFFIKL 73 Query: 61 -------YVWIFRGTPLLVQLFVIFYGLP----HIGIVFDSFVAIIISLTLNFSAYISEI 109 Y+ +FRGTP++VQ VI+YGLP D A + +++N +Y++EI Sbjct: 74 SQIIIKIYIAVFRGTPMIVQAMVIYYGLPVLLQRFDFNLDPIPAALFIVSINTGSYMAEI 133 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IR I S+ KGQ + + AIG++ QT++ II PQ I + +EFI +K TSV + I Sbjct: 134 IRGGIDSVDKGQLEGAQAIGMSHFQTMKSIIFPQAIRNVLPSVGNEFIINIKDTSVLNVI 193 Query: 170 TIPEIFQTAQRIVST 184 ++ E+F T++ + T Sbjct: 194 SVTELFFTSKSLAGT 208 >gi|225163802|ref|ZP_03726100.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Opitutaceae bacterium TAV2] gi|224801595|gb|EEG19893.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Opitutaceae bacterium TAV2] Length = 229 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 118/211 (55%), Gaps = 15/211 (7%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W +I + P LL + +TL + +S ++ + +G +A+ R+ S + L YV Sbjct: 3 NW-EIIQEELPFLL-GGVKITLLVTLVSVILGVTLGVGVALTRLS-SHAWLRLPATAYVE 59 Query: 64 IFRGTPLLVQLFVIFY-----------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 + RGTP+LVQ+F++++ GL + ++ A +++L +N SAY+ EI R Sbjct: 60 VLRGTPMLVQIFIMYFAFFPMLAEHVPGLEGLARA-NAIYAGMLALGVNSSAYLGEIFRG 118 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I S+ GQ++A ++G+T + +RHI+LPQ + + + +EF++++K +S+ S I + Sbjct: 119 GIQSVDIGQYEAGRSLGMTPYRIMRHIVLPQALVNALPAVGNEFVTLIKDSSLVSAIAVA 178 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ AQ+ +Y+ +Y +A +Y LT Sbjct: 179 DLTYRAQQAGGRSYEFFSMYLAIAIIYFCLT 209 >gi|304405414|ref|ZP_07387073.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] gi|304345453|gb|EFM11288.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] Length = 305 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 126/221 (57%), Gaps = 13/221 (5%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P+LL + +TL I S ++ ++GF IA+ R++ + I+ + YV FRGTP+L+Q Sbjct: 15 PKLL-GYLEITLFIVAASMLLGFLVGFLIALPRMY-NVPILRTVSRVYVSFFRGTPILIQ 72 Query: 74 LFVIFYGLPHI--GIVFDS-----FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 LF+I+YGLP + G+ D V +I++ L+ A+ISE IR+ + ++ +GQ +A+ Sbjct: 73 LFLIYYGLPELLKGVGVDVSKLPVLVFVILTYGLHTGAFISETIRAGVGAVDRGQTEAAL 132 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 AIG+T Q+ I+LPQ + S +++ I+ LK TS+A ++ + E+ +Q + T Sbjct: 133 AIGMTGYQSFLRIVLPQAVAVSMPVVANLVIANLKDTSLAFSLGVMEMTGKSQTLGQATQ 192 Query: 187 QPLIIYCELAFVY----LILTSFCYIIQIKIESSVTQHTYS 223 + +Y L+ +Y ++L S + + ++ + + S Sbjct: 193 HFIEVYIALSAIYFAVSMVLESLFKLAERRLLRHEARQSNS 233 >gi|317047032|ref|YP_004114680.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316948649|gb|ADU68124.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 222 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 108/198 (54%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + +P+LL A + +T+ + ++ V + +G A +R ++ I YV + Sbjct: 7 FAALWPHWPELL-AGLWITIQLTVLATVGGVALGILGAALRTG-KPSLAGRIWGIYVELI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP +VQLF I +GLP++G+ + A ++++ +N AY +EIIR+ I PKGQW+A Sbjct: 65 RNTPFVVQLFFIVFGLPNLGLKLTAGEAALLAMLINLGAYSTEIIRAGIQVTPKGQWEAG 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GLTR QT ++LP ++ L S+ I ++ +SV S ++ E+ A I S T Sbjct: 125 RVLGLTRSQTFLRVVLPPSLQRIYPALVSQCIIVMLGSSVVSQVSYEELTFAANLIQSRT 184 Query: 186 YQPLIIYCELAFVYLILT 203 + +Y +YL L+ Sbjct: 185 FLSFEVYLVTTLIYLALS 202 >gi|226224893|ref|YP_002759000.1| amino acid ABC-transporter (permease) [Listeria monocytogenes Clip81459] gi|225877355|emb|CAS06069.1| Putative amino acid ABC-transporter (permease) [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 238 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 126/227 (55%), Gaps = 15/227 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +I D P L + +TL I +S + I+G +++ RI+ ++ ++ Y+ FR Sbjct: 8 KMIADFIPTLA-GYLPITLYILALSLIFGFILGVLLSLPRIY-KIPVLDQLVRVYISFFR 65 Query: 67 GTPLLVQLFVIFYGLPH----IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 GTP++VQLF++FYG+P +GI D A I + L+ +A I+E+IR+ + S+ Sbjct: 66 GTPIMVQLFIVFYGIPALSSIVGIDLSQMDPLYAAIATYALSSAATIAEVIRAGVNSVDA 125 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+Y+IGL+ +QT IILPQ + + + I LK TS+A +I + ++ Q Sbjct: 126 GQAEAAYSIGLSSRQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQ 185 Query: 180 RIVSTTYQPLIIYCELAFVY-----LILTSFCYIIQIKIESSVTQHT 221 +++ + L +Y L+ +Y L+ SF + I+ +++ T+ T Sbjct: 186 TLITLSNHALEVYISLSIIYYLTAVLLEYSFKW-IEKRVKKENTRFT 231 >gi|259047073|ref|ZP_05737474.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein/permease protein [Granulicatella adiacens ATCC 49175] gi|259036123|gb|EEW37378.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein/permease protein [Granulicatella adiacens ATCC 49175] Length = 478 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/180 (33%), Positives = 106/180 (58%), Gaps = 2/180 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + ++ + + +IG +I+ ++I+ I FY+ RG PL+V F I++G+P Sbjct: 284 TIVLTVVALIFASLIGIIFGLIKTS-QNSIVQAIAGFYIDTIRGVPLIVLTFFIYFGIPQ 342 Query: 84 I-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 I FVA +I+L+LN SAYI+EIIR I ++ KGQ++A ++GL ++++ +ILP Sbjct: 343 AFDITMQPFVAGVITLSLNASAYIAEIIRGGIQAVDKGQYEACMSLGLPYSKSMQKVILP 402 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q I ++F+ LK TS+ S I I E+ QT + I++ Q ++ + +YLI+ Sbjct: 403 QAIRIMVPSFINQFVITLKDTSILSIIGIAELTQTGKVIIARNLQSSQMWLIVGVMYLIV 462 >gi|227512776|ref|ZP_03942825.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus buchneri ATCC 11577] gi|227522900|ref|ZP_03952949.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus hilgardii ATCC 8290] gi|227083976|gb|EEI19288.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus buchneri ATCC 11577] gi|227089929|gb|EEI25241.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus hilgardii ATCC 8290] Length = 235 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 115/206 (55%), Gaps = 11/206 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W N+ + L VT+ ++ S V+S I G + V R + +S I+ F + Sbjct: 8 YSWVNI------KFLLEGAWVTILVSVCSIVLSYIFGVILGVTR-YVQIKYLSAIVGFVI 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PL++ +F ++GLPH+G D A +I++ + +A ++EI+R+ I+SIP GQ Sbjct: 61 DIIRNLPLILIIFFTYFGLPHLGFKPDPIWASVIAMAVFEAAMVAEIVRAGIVSIPTGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + A GL+ Q + +I+LPQ I + S+FIS++K TS+A+ I +P++ AQ I Sbjct: 121 EGARANGLSYWQALWYIVLPQAIRNMIPAIVSQFISLVKDTSLATIIVLPDLMNHAQIIY 180 Query: 183 S-TTYQPLIIYCELAFVYLILTSFCY 207 T + ++ LA +Y I+ CY Sbjct: 181 GQNTNYTIPMFLALAVMYFIV---CY 203 >gi|330951201|gb|EGH51461.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 215 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 93/149 (62%), Gaps = 3/149 (2%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y+ +F+GTPLL+QLF++F+G+ +G+ + A ++LTL SAY++EI R + SI Sbjct: 53 KLYIELFQGTPLLMQLFLVFFGVALMGMNISPWAAAALALTLFTSAYLAEIWRGCVESIS 112 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG+W+AS ++ LT + +R++ILPQ + + P + ++K T+V S I E+ +T Sbjct: 113 KGRWEASASLALTPFEQMRYVILPQALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTG 172 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + + T++P ++Y +A Y IL CY Sbjct: 173 SMLANATFEPFMVYGFVALGYFIL---CY 198 >gi|308067188|ref|YP_003868793.1| amino acid ABC transporter permease [Paenibacillus polymyxa E681] gi|305856467|gb|ADM68255.1| ABC-type amino acid transport system, permease component [Paenibacillus polymyxa E681] Length = 219 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/180 (34%), Positives = 110/180 (61%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + I+ + S I+G IA++RI ++ I YV + R PLL+ + + GLP Sbjct: 23 TVQASVIALIGSFILGAIIAILRIA-PFKWLNWIGTVYVEVIRNIPLLIVVLFFYLGLPT 81 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +GI D FV+ + LT+ +++I+E IR+ I ++PKGQ++A+ + GL+ QT+ +IILPQ Sbjct: 82 LGIPLDGFVSGTLGLTVYTASFIAEAIRAGIQAVPKGQFEAARSSGLSYNQTMINIILPQ 141 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I + ++FI+++K++SV + + ++ + I S T+ P+ +Y A +YLILT Sbjct: 142 AIKVVLPAIGNQFINLVKNSSVLAIVAGLDLMYYSDLINSDTFLPITVYAITALLYLILT 201 >gi|224372631|ref|YP_002607003.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Nautilia profundicola AmH] gi|223588694|gb|ACM92430.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Nautilia profundicola AmH] Length = 237 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/238 (29%), Positives = 128/238 (53%), Gaps = 21/238 (8%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M YE+ ++ + LL ++ T+ ++ + + S +IG + + R + +SL + Sbjct: 1 MGYEFDWGVLIEYKGLLIQGLITTVKLSILGILFSFLIGSIVGIGRAS-KNFWLSLFASY 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLP---------------HIGIVFDSFVAIIISLTLNFSAY 105 YV FR PL+VQ+F I++ HI V D+F + +++L L AY Sbjct: 60 YVESFRNIPLIVQMFFIYFTFTLSQIFPFLNSWGEFLHIQDV-DAFFSALLALILYTGAY 118 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 I E++++ I SIPKGQ++A+ ++G+ R Q + +II PQ I PL+S+F++++K++S+ Sbjct: 119 IGEVVKAGINSIPKGQFEAAQSLGMNRFQVMWYIIYPQAIRIIIPPLTSQFLNLIKNSSL 178 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS----FCYIIQIKIESSVTQ 219 A TI + E+ Q+I + T++ + +Y+ LT F +I+IK V Sbjct: 179 AMTIGVAELTFATQQIDAETFRGFEAATAVTILYIFLTLTTSFFMNLIEIKFSKGVKN 236 >gi|294851192|ref|ZP_06791865.1| polar amino acid transport system permease [Brucella sp. NVSL 07-0026] gi|294819781|gb|EFG36780.1| polar amino acid transport system permease [Brucella sp. NVSL 07-0026] Length = 314 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 122/209 (58%), Gaps = 12/209 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMHFYVWIFRG 67 +FPQLL AI L I+ I+ +++LI G + ++R I + +I +++ F RG Sbjct: 105 GAFPQLL-PAIGTNLVISIIAMILALIGGTALTILRTLGIAPLNAVIGVVISF----IRG 159 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TP+LVQ+F+ +YGLP +G+ A I+++ N S +I+EI+R + + G +A+ A Sbjct: 160 TPILVQIFLFYYGLPALGLDLSPIQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIA 219 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ K +ILPQ PL +E +I+K T++ S IT+ E+ +TAQ++ + +++ Sbjct: 220 LGIKGKVIWTKVILPQLYIRIMPPLVNELTTIVKGTALLSVITVVEVLRTAQQVANASFR 279 Query: 188 PL-IIYCE---LAFVYLILTSFCYIIQIK 212 PL + C L V L+L+ +++++ Sbjct: 280 PLETLLCAAIILFAVNLVLSQCGRVLEMR 308 >gi|170739980|ref|YP_001768635.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168194254|gb|ACA16201.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 227 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 64/193 (33%), Positives = 105/193 (54%), Gaps = 3/193 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M+Y + F + + +P L A+ TL + ++ V+ L+IG AV R +S + Sbjct: 1 MRYRFDFEALAEYWPDFLMGALT-TLEMTAVATVLGLLIGILCAVGR-RSPRAWLSRLCG 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV R TP L+Q+F +++GL G+ A I++L +N AY EI+R+ + +IP Sbjct: 59 GYVETVRNTPYLIQVFFLYFGLASAGLRLPVLTAAILTLVVNVGAYTGEIVRAGMDTIPP 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ A+GLTR Q R IIL + L+S+F+ ++ ++SV S I+ E+ A Sbjct: 119 GQVEAAEALGLTRAQIYRDIILRPALERVYPALTSQFVLMMLASSVTSQISAEELTAVAN 178 Query: 180 RIVSTTYQPLIIY 192 I S T++ Y Sbjct: 179 NITSITFRSFETY 191 >gi|58336908|ref|YP_193493.1| glutamine ABC transporter membrane protein [Lactobacillus acidophilus NCFM] gi|227903466|ref|ZP_04021271.1| glutamine ABC superfamily ATP binding cassette transporter membrane protein [Lactobacillus acidophilus ATCC 4796] gi|58254225|gb|AAV42462.1| glutamine ABC transporter (membrane protein) [Lactobacillus acidophilus NCFM] gi|227868786|gb|EEJ76207.1| glutamine ABC superfamily ATP binding cassette transporter membrane protein [Lactobacillus acidophilus ATCC 4796] Length = 218 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 116/205 (56%), Gaps = 9/205 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W ++ + L + VT+ ++ IS +S ++G + ++R + +S I+ F + Sbjct: 8 YSWVDI------RFLLQGLWVTIYVSLISIALSFVVGLILGLVR-YMKIKYLSAIVGFII 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP +GIV + A I +L + A ++EI+RS I S+ GQ Sbjct: 61 DIIRNLPLLLIIFFTYFGLPQLGIVTNPTTASIAALVIFEGAMLAEIVRSGIGSVDPGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + G+T Q + H+++PQ + L S+F+S++K TS+A+ I +PE+ AQ I Sbjct: 121 EGARSNGMTYGQAMYHVVMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLILTSFC 206 S LI +Y +A +Y I+ FC Sbjct: 181 SQNTTYLIPMYVIIAIMYFIV-CFC 204 >gi|300312813|ref|YP_003776905.1| glutamate/aspartate ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300075598|gb|ADJ64997.1| ABC-type glutamate/aspartate transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 241 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 111/197 (56%), Gaps = 11/197 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + VT+ + +++++L++G F+ ++R + +S YV +FR PLLVQ+F+ Sbjct: 24 LLSGLGVTVALGLSAWILALVLGTFLGILRTL-PNRALSGFAACYVELFRNVPLLVQIFI 82 Query: 77 IFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 ++ +P + D+ FV ++ L + +A + E +RS I S+P+GQ A Sbjct: 83 WYFAMPELLPWGDAVKALPPMTQQFVMAMLCLGMFTAARVCEQVRSGIESLPRGQKGAGL 142 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+GLT QT ++LP + PL+SEF++I K+++VASTI + E+ +++V T Sbjct: 143 ALGLTLGQTYLFVLLPMAMRIVLPPLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTA 202 Query: 187 QPLIIYCELAFVYLILT 203 QP + + Y+++ Sbjct: 203 QPYEAFIAVTLAYMLIN 219 >gi|225628152|ref|ZP_03786187.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti str. Cudo] gi|225616977|gb|EEH14024.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti str. Cudo] Length = 281 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 122/209 (58%), Gaps = 12/209 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMHFYVWIFRG 67 +FPQLL AI L I+ I+ +++LI G + ++R I + +I +++ F RG Sbjct: 72 GAFPQLL-PAIGTNLVISIIAMILALIGGTALTILRTLGIAPLNAVIGVVISF----IRG 126 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TP+LVQ+F+ +YGLP +G+ A I+++ N S +I+EI+R + + G +A+ A Sbjct: 127 TPILVQIFLFYYGLPALGLDLSPIQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIA 186 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ K +ILPQ PL +E +I+K T++ S IT+ E+ +TAQ++ + +++ Sbjct: 187 LGIKGKVIWTKVILPQLYIRIMPPLVNELTTIVKGTALLSVITVVEVLRTAQQVANASFR 246 Query: 188 PL-IIYCE---LAFVYLILTSFCYIIQIK 212 PL + C L V L+L+ +++++ Sbjct: 247 PLETLLCAAIILFAVNLVLSQCGRVLEMR 275 >gi|170746805|ref|YP_001753065.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium radiotolerans JCM 2831] gi|170653327|gb|ACB22382.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium radiotolerans JCM 2831] Length = 217 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/189 (34%), Positives = 108/189 (57%), Gaps = 2/189 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D P LL + +T+ I S V+S ++G AV+R+ I+S + I RG P+ Sbjct: 10 DYLPILLQG-VQLTILITIASLVVSTLLGLVWAVMRVS-GIAILSGFSAVMINILRGIPI 67 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 +VQLF I++ +P G+ + A II L + +SAY +E R+ I ++ +GQ +A+ +IG+ Sbjct: 68 IVQLFYIYFVMPDFGLSLTAVQAAIIGLGIAYSAYQAENFRAGIEAVDRGQVEAALSIGM 127 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T+R +ILPQ I + P + I +LK +S ASTIT+ E+ + I S+T++ Sbjct: 128 GWGMTMRRVILPQAIRIALPPYGNIMIMMLKDSSQASTITVAELALQGKLIASSTFKNTS 187 Query: 191 IYCELAFVY 199 +Y +A +Y Sbjct: 188 VYTLVALMY 196 >gi|42518711|ref|NP_964641.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] gi|41582997|gb|AAS08607.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] Length = 497 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/146 (36%), Positives = 92/146 (63%), Gaps = 6/146 (4%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ RGTP +VQ+ +++G+ ++ + VA II++ LN AY++E IRS I S+PKG Sbjct: 335 YIEFIRGTPQMVQILFVYFGIGYLISNLSALVAGIIAIGLNSGAYVAEDIRSGIDSLPKG 394 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++GL+R++ R++I+PQ I L +EFI++LK +S+ S I + E+ Q Sbjct: 395 QMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNEFITLLKDSSLVSVIGVAELMYQTQL 454 Query: 181 IVSTTYQ---PLIIYCELAFVYLILT 203 + ++TY+ PL I +Y I+T Sbjct: 455 VQTSTYKGVLPLFIAM---IIYFIMT 477 >gi|134291671|ref|YP_001115440.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia vietnamiensis G4] gi|134134860|gb|ABO59185.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia vietnamiensis G4] Length = 228 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 104/195 (53%), Gaps = 4/195 (2%) Query: 1 MKYE-WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--I 57 M Y+ F + D + + + TL + ++ V+ + IG A + + L + Sbjct: 1 MSYQLQFGELAD-YAGVFASGAATTLALTAVATVLGVAIGILGAAAYSVDARAAVRLRPL 59 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + YV R TP +VQLF IF+GLP +G+ + A I+++TLN AY EI+R+ + ++ Sbjct: 60 IGAYVEAIRNTPFVVQLFFIFFGLPALGVHIGEYAAAILAMTLNLGAYSVEIVRAGVAAV 119 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P G +A+ A+ ++R Q +RH++LPQ + LSS+ + + ++V S I++ ++ Sbjct: 120 PNGHVEAASALAMSRAQMLRHVVLPQALAKVFPALSSQIVITMLGSAVVSQISVADLTYA 179 Query: 178 AQRIVSTTYQPLIIY 192 A I S ++ Y Sbjct: 180 AGYIQSRNFRAFETY 194 >gi|329295703|ref|ZP_08253039.1| polar amino acid ABC transporter, inner membrane subunit [Plautia stali symbiont] Length = 257 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/149 (37%), Positives = 89/149 (59%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I H YV R TP+L+Q+F+IF+GLP +GI +F A +++L +N AY+SE R+ I S Sbjct: 54 ISHCYVEFIRNTPVLLQIFIIFFGLPSLGITMSAFTAGVLALGINVGAYLSETFRAGIQS 113 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + KGQ +A+Y +G+ R Q ++LPQ + + I +L TS+ S I +PE+ Sbjct: 114 VAKGQLEAAYILGIPRHQIFLSVVLPQAARAVWPAIINNLIQLLLGTSLLSAIALPELTG 173 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSF 205 TA I + T + + +A VYL+L++ Sbjct: 174 TATVINARTLLYIQTFSVVALVYLVLSNL 202 >gi|317130817|ref|YP_004097099.1| polar amino acid ABC transporter inner membrane subunit [Bacillus cellulosilyticus DSM 2522] gi|315475765|gb|ADU32368.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cellulosilyticus DSM 2522] Length = 224 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 64/178 (35%), Positives = 104/178 (58%), Gaps = 2/178 (1%) Query: 41 FIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLT 99 F+ + R+ S I L Y+ + RGTP++VQ V+++ + +IGI ++ A I+++ Sbjct: 45 FVGIARLSKSKIIYGL-ATIYIELIRGTPIIVQAIVLYFAVSQNIGINLNAPTAGIVAIA 103 Query: 100 LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISI 159 +N AYISEI+R + SI KGQ +A ++GL+ +QT+R+II PQ PL ++FI Sbjct: 104 INAGAYISEIVRGGVQSIDKGQMEAGRSLGLSSRQTMRYIIWPQAFKRMIPPLGNQFIIS 163 Query: 160 LKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 LK TSV + I++ E+ + VS++ L Y L YLI+T +I +IE + Sbjct: 164 LKDTSVFAIISLQEVTFLMRMYVSSSANTLQPYIMLCLAYLIITIPAMLILRRIERRL 221 >gi|255994314|ref|ZP_05427449.1| glutamine ABC transporter, permease protein [Eubacterium saphenum ATCC 49989] gi|255993027|gb|EEU03116.1| glutamine ABC transporter, permease protein [Eubacterium saphenum ATCC 49989] Length = 224 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 106/191 (55%), Gaps = 8/191 (4%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL + ++ + + +GFFIA++++ + ++ I YV I RGTPL+VQ ++ Y Sbjct: 14 GVPMTLQVTVMAVIFGIFLGFFIALMKMS-KNILLRGIAGVYVEIVRGTPLIVQALIMAY 72 Query: 80 GLPHIGIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 G+P I + S + + LN +AY++E+IR + S+ GQ +A+ ++G+++ Sbjct: 73 GIPTILQAYGSEFKWANLIIPAVCVCALNSAAYVAEVIRGGLQSVDHGQMEAASSLGMSK 132 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +R II+PQ L +EFI+++K TSV + +PEI + + S+ + Y Sbjct: 133 FMALRLIIIPQAFKIIMPSLGNEFITLIKETSVLAFCGVPEILRQGELWASSNFNTFEAY 192 Query: 193 CELAFVYLILT 203 +A Y+ LT Sbjct: 193 TGVALAYMCLT 203 >gi|152974179|ref|YP_001373696.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152022931|gb|ABS20701.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cytotoxicus NVH 391-98] Length = 230 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/153 (35%), Positives = 95/153 (62%), Gaps = 1/153 (0%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEI 109 ++ +++ I H Y+ + RGTPL+VQ+ ++++G+ I +VF F A I+L ++ AYI+EI Sbjct: 44 NNKLLNSIAHIYIAVIRGTPLIVQIAILYFGITSI-VVFTPFWAGAIALAIHNGAYITEI 102 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R SI S+ +GQ +A+ ++G++ +R IILPQ S PL ++FI LK +S+ + + Sbjct: 103 FRGSIQSVDRGQLEAARSLGMSYPLAMRRIILPQAFRLSIPPLGNQFIIGLKDSSLVAYV 162 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + E++ + I + YQ L Y + YL+L Sbjct: 163 GMSELWGSGLSIAAGNYQQLNTYIVVGIYYLVL 195 >gi|292492726|ref|YP_003528165.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD [Nitrosococcus halophilus Nc4] gi|291581321|gb|ADE15778.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Nitrosococcus halophilus Nc4] Length = 217 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/222 (30%), Positives = 117/222 (52%), Gaps = 9/222 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLI 57 M ++W +D P LL VT+ +LI+G A++R I TI + + Sbjct: 1 MVFDW-QYALDILPDLLRG-FWVTIQATFWGMTAALILGLAWAILRRSAIRIMATITAWV 58 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 + F R TPLLVQL+ +F+ LP G+ F+ ++ L L++S Y SE+ R+ I + Sbjct: 59 VEF----IRSTPLLVQLYFLFFVLPEFGVTLSPFLTGVVGLGLHYSTYTSEVYRAGIEGV 114 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P+GQW+A+ A+ ++R + IILPQ I L + I++ K T + + IT+ E+ QT Sbjct: 115 PEGQWEAAIALNMSRFHIWKAIILPQAIPPVIPALGNYLIAMFKDTPLLAAITVMELLQT 174 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 A+ + T++ L + ++L+++ + K+E+ Q Sbjct: 175 AKLSGAETFRYLEPLTLVGLLFLVISLLSSRLIRKLEARFAQ 216 >gi|228478305|ref|ZP_04062913.1| ABC transporter, permease protein [Streptococcus salivarius SK126] gi|312863121|ref|ZP_07723359.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] gi|322517165|ref|ZP_08070048.1| polar amino acid uptake ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] gi|228249984|gb|EEK09254.1| ABC transporter, permease protein [Streptococcus salivarius SK126] gi|311100657|gb|EFQ58862.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] gi|322124224|gb|EFX95740.1| polar amino acid uptake ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] Length = 226 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 104/172 (60%), Gaps = 9/172 (5%) Query: 57 IMHFYVWIFRGTPLLVQLFVIF----YGLPHI--GIV---FDSFVAIIISLTLNFSAYIS 107 ++ YVW+FRGTP++VQ+ + F LP + GI+ V II L+LN AYIS Sbjct: 52 LVSLYVWVFRGTPMVVQIMIAFNLIHMNLPTVQFGILNLDLSRIVPGIIVLSLNSGAYIS 111 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E +R+ I SIPKGQ +A+Y++G+ T+R+++LPQ I L +EF++I+K +S+ Sbjct: 112 ESVRAGIESIPKGQVEAAYSLGIRPWNTMRYVVLPQAIKNILPALGNEFVTIIKDSSLLQ 171 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 TI + E++ AQ + +TTY L AF YLI+T+ + ++E + + Sbjct: 172 TIGVMELWNGAQTVATTTYLTLTPLLFAAFYYLIVTTAMTALLKQMEKRLGE 223 >gi|118470944|ref|YP_887549.1| amino acid ABC transporter permease [Mycobacterium smegmatis str. MC2 155] gi|118172231|gb|ABK73127.1| ABC-type amino acid transport system, permease component [Mycobacterium smegmatis str. MC2 155] Length = 310 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/222 (31%), Positives = 124/222 (55%), Gaps = 25/222 (11%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 ++L ++ TL + S +I++++G +AV+R+ + + + Y+WIFRGTP+ VQL Sbjct: 62 RVLTVGVLNTLQLTIYSMLIAIVLGVLLAVMRLS-PNPVFRSVAWVYLWIFRGTPVYVQL 120 Query: 75 FVIFYGL-P------HIGIVFDS-------------FVAIIISLTLNFSAYISEIIRSSI 114 +F+GL P +G+ F F+ I+ L LN +AY++EIIR+ I Sbjct: 121 --VFWGLLPTIYQNIQLGVPFGPSFFHLNLQSLSIPFLLAILGLALNEAAYMAEIIRAGI 178 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI--TIP 172 S+P+GQ +AS A+G++ +R +LPQ + P +E IS+LK+TS+ + + T+ Sbjct: 179 SSVPEGQMEASTALGMSWGLAMRRTVLPQAMRVIIPPTGNEIISMLKTTSLVTAVPFTLD 238 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 T++ I + ++P+ + A YL++TS + Q +E Sbjct: 239 LYGITSREIAARIFEPVPLLLVAATWYLVITSILMVGQYYLE 280 >gi|332200942|gb|EGJ15013.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA47901] Length = 213 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/160 (36%), Positives = 90/160 (56%), Gaps = 1/160 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +++ Y+W+ RGTPLL+QL I+Y LP IGI D A II+ LN++AY +EI R I + Sbjct: 50 LINIYIWVMRGTPLLLQLIFIYYVLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDT 109 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQ++A+ + + +R+IILPQ + +E +S++K TS+ + I ++ Sbjct: 110 IPRGQYEAAKVLKFSPFDRVRYIILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLI- 168 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 A R + LI +YLIL II K+E Sbjct: 169 LASRTAANRDASLIPMFLAGAIYLILIGIVTIISKKVEKK 208 >gi|260567564|ref|ZP_05838034.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|260157082|gb|EEW92162.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40] Length = 314 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 122/209 (58%), Gaps = 12/209 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMHFYVWIFRG 67 +FPQLL AI L I+ I+ +++LI G + ++R I + +I +++ F RG Sbjct: 105 GAFPQLL-PAIGTNLVISIIAMILALIGGTALTILRTLGIAPLNAVIGVVISF----IRG 159 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TP+LVQ+F+ +YGLP +G+ A I+++ N S +I+EI+R + + G +A+ A Sbjct: 160 TPILVQIFLFYYGLPALGLDLSPIQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIA 219 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ K +ILPQ PL +E +I+K T++ S IT+ E+ +TAQ++ + +++ Sbjct: 220 LGIKGKVIWTKVILPQLYIRIMPPLVNELTTIVKGTALLSVITVVEVLRTAQQVANASFR 279 Query: 188 PL-IIYCE---LAFVYLILTSFCYIIQIK 212 PL + C L V L+L+ +++++ Sbjct: 280 PLETLLCAAIILFAVNLVLSQCGRVLEMR 308 >gi|222823608|ref|YP_002575182.1| amino acid ABC transporter permease [Campylobacter lari RM2100] gi|222538830|gb|ACM63931.1| amino acid ABC transporter, permease protein [Campylobacter lari RM2100] Length = 250 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 110/206 (53%), Gaps = 20/206 (9%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + +I +++GFF+A +R F ++ I+ Y+ I RGTP+L+QL + + + Sbjct: 56 ITLGLTVGGILIGIVLGFFLAFLR-FLEIQSLNFIIDEYIDIIRGTPILLQLLI--FSVV 112 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 D+F II+L LN SAY++EI+RS I S+ KGQ +A+ A+GL ++R II P Sbjct: 113 IFATWSDNFYVAIIALGLNSSAYVAEIVRSGIQSVDKGQMEAARAMGLNYSASMRLIIFP 172 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q I L +EFIS+ K TS+ I++ +I ++ + + Y P I I Sbjct: 173 QAIKNILPSLMNEFISLFKETSIVGYISVMDITMQSKSLQAIYYNPKPI---------IF 223 Query: 203 TSFCYIIQIKI--------ESSVTQH 220 T Y + +KI E + +H Sbjct: 224 TGLVYYVSVKIFTLFARILEERLNKH 249 >gi|209546301|ref|YP_002278191.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539158|gb|ACI59091.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 234 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/224 (29%), Positives = 124/224 (55%), Gaps = 16/224 (7%) Query: 19 AAIVVTL----PIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLL 71 A+ +VTL P I F +S+ G +A++ + + ++S I Y+++FRG+PLL Sbjct: 7 ASTMVTLLKAVPTTLILFSLSIFFGGLLALVIVSMRVSGNRVLSGIAKGYIFVFRGSPLL 66 Query: 72 VQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +Q+F++FYGL G++ SF V ++SL L + Y +EI R I ++ + Sbjct: 67 IQMFLVFYGLGQFGVIRYSFLWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRAVSPKEI 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ +IG++ +R I+ P + S+E + ++KST++AS +T+ E+ AQR++ Sbjct: 127 EAARSIGMSGFLLVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLI 186 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 S TY+ + ++ A +YL+L +E S+++H + + Sbjct: 187 SQTYRTMEVFLCAAIIYLVLNFIILQGMALLEYSLSRHRRAAPQ 230 >gi|83718147|ref|YP_440543.1| glutamine ABC transporter permease [Burkholderia thailandensis E264] gi|83651972|gb|ABC36036.1| glutamine ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 230 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/175 (30%), Positives = 100/175 (57%), Gaps = 6/175 (3%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG-IVFD 89 F++ +I G F A + ++++ Y+ + RGTP++VQ+ +++ LP + I D Sbjct: 45 GFLVGMIAGMFRA-----YGPAALNVLTQVYIELIRGTPIVVQVMFLYFALPMLAHIRID 99 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 A I+++TLN AY++E++R +++SIPKG +A A+GL+ + + I+ P Sbjct: 100 GLTAAIVAITLNSGAYLAEVVRGALLSIPKGVTEAGLAMGLSMPRVLVKIVGPLAFRRLI 159 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 PL ++ I LK TS+ I + E+ + Q I++ +Q + I+ +A +YL LT Sbjct: 160 APLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAAIYLALTG 214 >gi|261758895|ref|ZP_06002604.1| polar amino acid ABC transporter [Brucella sp. F5/99] gi|261738879|gb|EEY26875.1| polar amino acid ABC transporter [Brucella sp. F5/99] Length = 314 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 122/209 (58%), Gaps = 12/209 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMHFYVWIFRG 67 +FPQLL AI L I+ I+ +++LI G + ++R I + +I +++ F RG Sbjct: 105 GAFPQLL-PAIGTNLVISIIAMILALIGGTALTILRTLGIAPLNAVIGVVISF----IRG 159 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TP+LVQ+F+ +YGLP +G+ A I+++ N S +I+EI+R + + G +A+ A Sbjct: 160 TPILVQIFLFYYGLPALGLDLSPIQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIA 219 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ K +ILPQ PL +E +I+K T++ S IT+ E+ +TAQ++ + +++ Sbjct: 220 LGIKGKVIWTKVILPQLYIRIMPPLVNELTTIVKGTALLSVITVVEVLRTAQQVANASFR 279 Query: 188 PL-IIYCE---LAFVYLILTSFCYIIQIK 212 PL + C L V L+L+ +++++ Sbjct: 280 PLETLLCAAIILFAVNLVLSQCGRVLEMR 308 >gi|222106918|ref|YP_002547709.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221738097|gb|ACM38993.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 213 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/173 (37%), Positives = 100/173 (57%), Gaps = 3/173 (1%) Query: 33 VISLIIGFFIAVI---RIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 VIS+ IGF IA+ + + ++ ++ FRG PLLVQL +I+ LP IGI Sbjct: 21 VISIAIGFLIAIALSGAMLSGKRLYTMPTKLFISFFRGVPLLVQLLLIYNLLPFIGINVP 80 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 S VA II L+L +AY +E +R S+PKG +A+ G + +QT I LP + + Sbjct: 81 SVVAAIIGLSLCTAAYQAENLRGGFESVPKGLIEAADMAGFSGRQTFLRIKLPIALRLTF 140 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 L +E I ILKS+S+ S + I E+ + AQ + ++TY P+ ++ A +YLI+ Sbjct: 141 PALVNEAIMILKSSSLVSVVGIVELTRMAQDLAASTYLPIELFSSAALIYLII 193 >gi|254933324|ref|ZP_05266683.1| amino acid ABC transporter [Listeria monocytogenes HPB2262] gi|293584885|gb|EFF96917.1| amino acid ABC transporter [Listeria monocytogenes HPB2262] Length = 238 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 125/227 (55%), Gaps = 15/227 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +I D P L + +TL I +S + I+G +++ RI+ ++ + Y+ FR Sbjct: 8 KMIADFIPTLA-GYLPITLYILALSLIFGFILGVLLSLPRIY-KIPVLDQLARVYISFFR 65 Query: 67 GTPLLVQLFVIFYGLPH----IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 GTP++VQLF++FYG+P +GI D A I + L+ +A I+E+IR+ + S+ Sbjct: 66 GTPIMVQLFIVFYGIPALSSIVGIDLSQMDPLYAAIATYALSSAATIAEVIRAGVNSVDA 125 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+Y+IGL+ +QT IILPQ + + + I LK TS+A +I + ++ Q Sbjct: 126 GQAEAAYSIGLSSRQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGKGQ 185 Query: 180 RIVSTTYQPLIIYCELAFVY-----LILTSFCYIIQIKIESSVTQHT 221 +++ + L +Y L+ +Y L+ SF + I+ +++ T+ T Sbjct: 186 TLITLSNHALEVYISLSIIYYLTAVLLEYSFKW-IEKRVKKENTRFT 231 >gi|126737935|ref|ZP_01753665.1| ABC-type amino acid transport system, permease component [Roseobacter sp. SK209-2-6] gi|126721328|gb|EBA18032.1| ABC-type amino acid transport system, permease component [Roseobacter sp. SK209-2-6] Length = 222 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 114/203 (56%), Gaps = 5/203 (2%) Query: 3 YEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI-RIFFSDTIISLIMHF 60 ++W + + P+L+ A TL A + I+L++G +A+ R + ++ ++ Sbjct: 2 FDWKWEFAWEILPRLV-TATGNTLLAAGAGYAIALVLGLALAIAQRSPYRG--LTFVVRE 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +V R TPLL+Q+F IFY P GI +++ +I++ L++S Y+SE+ R I S+PKG Sbjct: 59 FVEFIRSTPLLLQIFFIFYVGPQFGIRLSPWMSGMIAIGLHYSCYLSEVYRGGIDSVPKG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A+ +T Q R +I+PQ I ++ + + + I K T + S I + E+ TA Sbjct: 119 QWEAAIALNMTTVQKYRRVIIPQAIPSALSGMGNYLVGIFKDTPMLSVIGVAELIHTANA 178 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I S Y+ L + + ++L ++ Sbjct: 179 IGSEHYRFLEPFTMVGIIFLAIS 201 >gi|325525581|gb|EGD03370.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. TJI49] Length = 500 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 120/215 (55%), Gaps = 8/215 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + + + + A VV + ++ ++++ +++GF +A+ R + + Sbjct: 1 MQFDWHYALQLLWDKDFWRACVVVVKLSVSAWLLGVLLGFPVALARQSHH-AALKRVAAV 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 Y+W FR PLLV L V Y LP + ++ D F A +I++ L+ +AY +EI R I+ Sbjct: 60 YIWFFRSLPLLV-LLVFIYNLPQVFPATSAVLSDPFTAGLIAMVLSETAYFAEIHRGGIL 118 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+P+GQ +A A+G+ R I++PQ I + L++EFI+I+K TS+ S I++ EI Sbjct: 119 SVPRGQLEAGRALGIRFTGIQRMIVMPQAIRIALPALANEFITIVKLTSLVSVISLAEIL 178 Query: 176 QTAQRIVSTTYQPLIIYCELAFVY-LILTSFCYII 209 QR+ + + +AF Y LI+T F ++ Sbjct: 179 LVGQRLYTQNFLVFETMLAVAFYYVLIVTVFSRLL 213 >gi|322388046|ref|ZP_08061652.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus infantis ATCC 700779] gi|321141067|gb|EFX36566.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus infantis ATCC 700779] Length = 238 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/156 (37%), Positives = 88/156 (56%), Gaps = 1/156 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+W+ RGTPLL+QL I+Y LP IGI D A II+ TLN++AY +EI R I +IP+G Sbjct: 79 YIWVMRGTPLLLQLIFIYYVLPSIGIRLDRVPAAIIAFTLNYAAYFAEIFRGGIATIPQG 138 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ + T+R+IILPQ + +E +S++K TS+ + I ++ A R Sbjct: 139 QYEAAKVLKFKPIDTVRYIILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLI-LASR 197 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 + LI +YL++ II K+E Sbjct: 198 TAANRDASLIPMFLAGAIYLLMIGIVTIIAKKLEKK 233 >gi|269962669|ref|ZP_06177014.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832592|gb|EEZ86706.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 246 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/190 (34%), Positives = 110/190 (57%), Gaps = 4/190 (2%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQ 73 + L A T+ ++ +S + ++ IG IA+ + SD+ I+ I YV + R P+LV Sbjct: 39 KFLIAGFNDTIQVSLLSMLFAMTIGLIIALPAL--SDSPILKWINRVYVEVIRSIPVLVL 96 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 L ++YG+P + + + F A II+LT+ SA+++E+ R I +I +GQ +A+ ++GL Sbjct: 97 LLWVYYGMPTLLDVSLNHFWAGIIALTIAESAFMAEVFRGGIQAISRGQHEAAESLGLNY 156 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 Q +R +ILPQ PL ++F+ ILK +S+ S I + ++ + A +V Y PL IY Sbjct: 157 WQKMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIY 216 Query: 193 CELAFVYLIL 202 L YL+L Sbjct: 217 TFLVLEYLVL 226 >gi|126179310|ref|YP_001047275.1| polar amino acid ABC transporter, inner membrane subunit [Methanoculleus marisnigri JR1] gi|125862104|gb|ABN57293.1| amino acid ABC transporter membrane protein 2, PAAT family [Methanoculleus marisnigri JR1] Length = 228 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 75/192 (39%), Positives = 119/192 (61%), Gaps = 9/192 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +VVTL + S L +G +AV R + + +IS I +V++ +GTPLL+ LF+ Sbjct: 15 LMQGLVVTLQLIACSAPFGLALGIAVAVGRQY-GNPVISWICKTFVFLIKGTPLLLLLFI 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GLP +GI F +FVA ++ L AY +E IR ++ISI +GQ A+ A+G+TR Q I Sbjct: 74 LYFGLPAVGITFTAFVASVVGFILCNGAYNAEYIRGALISIKEGQMVAAQALGMTRWQAI 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE-- 194 R++ILPQ + + LS+EFI ++K +S+A IT+ E+ A ++V+T Y Y E Sbjct: 134 RNVILPQALRRAIPGLSNEFIYLIKYSSLAYMITVIEL-SGAGKLVATKY---FTYTESF 189 Query: 195 --LAFVYLILTS 204 + VYL+L + Sbjct: 190 AAVGIVYLVLVT 201 >gi|55820684|ref|YP_139126.1| polar amino acid ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55822575|ref|YP_141016.1| amino acid (glutamine) ABC transporter permease [Streptococcus thermophilus CNRZ1066] gi|55736669|gb|AAV60311.1| polar amino acid ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55738560|gb|AAV62201.1| amino acid (glutamine) ABC transporter, permease protein [Streptococcus thermophilus CNRZ1066] Length = 227 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 104/172 (60%), Gaps = 9/172 (5%) Query: 57 IMHFYVWIFRGTPLLVQLFVIF----YGLPHI--GIV---FDSFVAIIISLTLNFSAYIS 107 ++ YVW+FRGTP++VQ+ + F LP + GI+ V II L+LN AYIS Sbjct: 53 LVSLYVWVFRGTPMVVQIMIAFNLIHMNLPTVQFGILNLDLSRIVPGIIVLSLNSGAYIS 112 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E +R+ I SIPKGQ +A+Y++G+ T+R+++LPQ I L +EF++I+K +S+ Sbjct: 113 ESVRAGIESIPKGQIEAAYSLGIRPWNTMRYVVLPQAIKNILPALGNEFVTIIKDSSLLQ 172 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 TI + E++ AQ + +TTY L AF YLI+T+ + ++E + + Sbjct: 173 TIGVMELWNGAQTVATTTYLTLTPLLFAAFYYLIVTTAMTALLKQMEKRLGK 224 >gi|294789394|ref|ZP_06754631.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Simonsiella muelleri ATCC 29453] gi|294482607|gb|EFG30297.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Simonsiella muelleri ATCC 29453] Length = 260 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 74/227 (32%), Positives = 121/227 (53%), Gaps = 36/227 (15%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA---VIRIFFSDTIISLIM------- 58 II + + + ++TL I ++ + I+G A +I+I + +IM Sbjct: 18 IIWEYRDMFFKGALLTLEITAVAVLGGTILGLMGALARIIKIEKGGAFVKIIMFILRTLS 77 Query: 59 HFYVWIFRGTPLLVQLFVIFYGL------PHIGIV------------FDSFVAIIISLTL 100 YV +FRGTPL VQ+F+ + P+ G++ + +A + +LT+ Sbjct: 78 GVYVTLFRGTPLFVQIFIWHFVWSVALINPNDGLLISGDLAAELRRNHGALIAGVFALTV 137 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N AYI+EI R+ I SI KGQ +A+ ++GLT Q +R IILPQ + P+++EFI++L Sbjct: 138 NAGAYITEIFRAGIQSIDKGQMEAARSLGLTYAQAMRFIILPQALRRMLPPIANEFITLL 197 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE----LAFVYLILT 203 K +S+AS I + E+ Q+ +S Y IY E +A +YLI+T Sbjct: 198 KDSSLASAIAVAEL-AYVQKTISGRYS---IYEEPLYTIALIYLIMT 240 >gi|293365295|ref|ZP_06612012.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus oralis ATCC 35037] gi|291316745|gb|EFE57181.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus oralis ATCC 35037] Length = 210 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/160 (34%), Positives = 90/160 (56%), Gaps = 1/160 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ Y+W+ RGTPLL+QL I+Y LP IGI D A +I+ LN++AY +EI R I + Sbjct: 47 LIDLYIWVMRGTPLLLQLIFIYYVLPSIGIRLDRLPAAVIAFVLNYAAYFAEIFRGGIET 106 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQ++A+ + + T+R+IILPQ + +E +S++K TS+ + I ++ Sbjct: 107 IPKGQYEAAKVLKFSPFDTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLI- 165 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 A R + L+ +YLI+ I+ ++E Sbjct: 166 LASRTAANRDASLVPMFLAGAIYLIMIGLVTIVAKRLEKK 205 >gi|320324764|gb|EFW80838.1| amino acid ABC transporter protein, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320328871|gb|EFW84870.1| amino acid ABC transporter protein, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330890404|gb|EGH23065.1| amino acid ABC transporter protein, permease [Pseudomonas syringae pv. mori str. 301020] Length = 216 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/152 (38%), Positives = 90/152 (59%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 TI+ + Y+ FR TPL+VQL+V+F+ LP GI F + +I L ++AYI+E R Sbjct: 49 TIVHRLSKGYLSFFRNTPLMVQLYVLFFALPLAGITFPAITTGVIGLGCYYAAYIAEAYR 108 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 +I IP GQW+A+ A+ +R T R IILPQ + L + I + K T + + ITI Sbjct: 109 GAIDDIPAGQWEAARALDFSRGDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVITI 168 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PE+FQ A++I TY+ Y +A ++L ++ Sbjct: 169 PELFQAAKQIAGMTYRYNEPYTVMALMFLAIS 200 >gi|227890382|ref|ZP_04008187.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] gi|268319112|ref|YP_003292768.1| hypothetical protein FI9785_623 [Lactobacillus johnsonii FI9785] gi|227849196|gb|EEJ59282.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] gi|262397487|emb|CAX66501.1| unnamed protein product [Lactobacillus johnsonii FI9785] Length = 216 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 116/200 (58%), Gaps = 8/200 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W N I Q L+ I V+L +SFV+ L+ GF I ++I + +S I+ F + Sbjct: 8 YSWIN--IRFLLQGLWVTIYVSLISIALSFVLGLVFGF-IRYVKIKY----LSAIVGFVI 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP +GI+ + +A II+L + A ++EI+RS I ++ GQ Sbjct: 61 DIIRNLPLLLIIFFTYFGLPELGIITNPTIASIIALVVFEGAMLAEIVRSGIAAVDPGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + G+T Q + H+I+PQ + L S+F+S++K TS+A+ I +PE+ AQ I Sbjct: 121 EGARSNGMTYMQAMYHVIIPQALNKMIPSLLSQFVSLVKDTSLATIIVLPELLFHAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLI 201 S LI +Y +A +Y I Sbjct: 181 SQNTTYLIPMYVIIAVMYFI 200 >gi|190895141|ref|YP_001985434.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700802|gb|ACE94884.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 216 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/188 (31%), Positives = 109/188 (57%), Gaps = 3/188 (1%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L + T+ ++ I+F I+G IA++R + + Y+ +F+GTPLL+QLF Sbjct: 12 MLMEGLKWTVLLSAIAFAGGGIVGVMIALMRTS-PYALPRWFAYLYIEVFQGTPLLMQLF 70 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 V +YG+ +G+ +++A I LT + SA++ EI R I ++P GQ +A+ A+GL + Sbjct: 71 VFYYGVALVGLDVSAWIAAAIGLTAHSSAFLGEIWRGGIEAVPLGQTEAARALGLPYRHR 130 Query: 136 IRHIILPQTITTSAVPLSSEF-ISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + ++LPQ S +P + F + ++K TS+ + I E+ + Q I + T+QPLI++ Sbjct: 131 MLDVVLPQAFKIS-LPATIGFLVGLVKGTSLVAIIGFTELTRAGQIISNNTFQPLIVFGM 189 Query: 195 LAFVYLIL 202 + +Y L Sbjct: 190 VGAIYFAL 197 >gi|261884808|ref|ZP_06008847.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 221 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 100/165 (60%), Gaps = 3/165 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + I +++GF +A ++ F + I+S I+ Y+ I RGTP+L+QL + + Sbjct: 46 TLGLTFGGIFIGIVLGFILAFLK-FLNIKILSFIIDEYIDIVRGTPVLLQLMI--FAFVI 102 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + + D+F A +I+L LN SAY++EI+RS I S+ KGQ +A+ A+GL+ ++R II PQ Sbjct: 103 LATLSDNFYAAVIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGLSYSVSMRQIIFPQ 162 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 + L++EFIS+ K TSV I I ++ ++ + +T P Sbjct: 163 AVKNILPALANEFISLFKETSVVGLIGIFDLTMQSKSLQATLLVP 207 >gi|227529156|ref|ZP_03959205.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] gi|227351000|gb|EEJ41291.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] Length = 501 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/180 (32%), Positives = 105/180 (58%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I +S I+G A++R+ + ++ I Y+ RGTP++VQ+ +++G+ Sbjct: 305 TLIITIVSVFFGFILGTLFALMRLS-KNKLLHTIAVCYIEFLRGTPMMVQIMFVYFGIGA 363 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 I + +A II+++LN AY++EIIRS I SIP GQ +A+ ++G+ + + R++I+PQ Sbjct: 364 IIQSLPALLAGIIAVSLNSGAYVAEIIRSGIQSIPLGQTEAARSLGMDKNKAFRYVIMPQ 423 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + L +E I++LK +S+ S I + E+ Q + S TY+ ++ +Y ILT Sbjct: 424 ALKNIWPALGNELITLLKDSSLVSVIGVTELMFQTQLVQSATYKGVLPLFITMMIYFILT 483 >gi|239815856|ref|YP_002944766.1| polar amino acid ABC transporter inner membrane subunit [Variovorax paradoxus S110] gi|239802433|gb|ACS19500.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 221 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 121/201 (60%), Gaps = 6/201 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++ F+ I D++ + + + VT+ ++ IS V S++ G IA++R++ + L++ F Sbjct: 1 MEFD-FSPIADNW-RFFASGLGVTVALSLISAVTSILAGLAIALLRLYGPGWLRRLLV-F 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ R P+LV L +++ P +G F F A +I+LTL+ +AY +E+IR+ I SI Sbjct: 58 YIDSMRAIPVLVVLVWMYFAFPLLVGFTFAPFWAAVIALTLHIAAYAAEVIRAGIESIRP 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISI-LKSTSVASTITIPEIFQTA 178 GQ A+ A+G++R Q +R ++LPQ T +P ++I +K T++A+ I +PE+ A Sbjct: 118 GQTRAALALGMSRAQLLRKVLLPQA-TIRMLPAFGSILTIAIKDTAIATVIAVPELMHRA 176 Query: 179 QRIVSTTYQPLIIYCELAFVY 199 + + +Y+P+ ++ + Y Sbjct: 177 ETVAGQSYRPVEVFTAVMVAY 197 >gi|167617347|ref|ZP_02385978.1| glutamine ABC transporter permease protein [Burkholderia thailandensis Bt4] gi|257141204|ref|ZP_05589466.1| glutamine ABC transporter permease protein [Burkholderia thailandensis E264] Length = 218 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/175 (30%), Positives = 100/175 (57%), Gaps = 6/175 (3%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG-IVFD 89 F++ +I G F A + ++++ Y+ + RGTP++VQ+ +++ LP + I D Sbjct: 33 GFLVGMIAGMFRA-----YGPAALNVLTQVYIELIRGTPIVVQVMFLYFALPMLAHIRID 87 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 A I+++TLN AY++E++R +++SIPKG +A A+GL+ + + I+ P Sbjct: 88 GLTAAIVAITLNSGAYLAEVVRGALLSIPKGVTEAGLAMGLSMPRVLVKIVGPLAFRRLI 147 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 PL ++ I LK TS+ I + E+ + Q I++ +Q + I+ +A +YL LT Sbjct: 148 APLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAAIYLALTG 202 >gi|238917322|ref|YP_002930839.1| polar amino acid transport system substrate-binding protein [Eubacterium eligens ATCC 27750] gi|238872682|gb|ACR72392.1| polar amino acid transport system substrate-binding protein [Eubacterium eligens ATCC 27750] Length = 510 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/174 (35%), Positives = 104/174 (59%), Gaps = 7/174 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + ++ TL I ++ + S+ +G + IR I+ I Y+ I RGTPL++QL V Sbjct: 304 LSSGMLATLAIFFLTLIFSMPLGLLVCEIRKS-RIGIVRWIARIYISIMRGTPLMLQLLV 362 Query: 77 IFYGLPH--IGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +F+G P+ G+ + F A+II LN++AY +EI R I SIPKGQ++A+ +G + Sbjct: 363 VFFG-PYYLFGMKVTATYRFYAVIIGFALNYAAYFAEIYRGGIESIPKGQYEAAEVLGYS 421 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 + QT II PQ + P+++E I+++K TS+A + E+F A+++ ++T Sbjct: 422 KVQTFWKIIFPQMVKRVLPPVTNEVITLVKDTSLAFALAYTEMFTLAKQVAAST 475 >gi|227329358|ref|ZP_03833382.1| putative amino acid ABC transporter, permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 218 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 104/184 (56%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ +F+ I+ F + ++R+ L+ H Y +F+GTPLL+QLF+ F+GL Sbjct: 20 TLLLSLTAFIGGAIVTFPLMLLRLTKRKWPTRLV-HLYSELFQGTPLLMQLFLAFFGLAL 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 GI + A ++LTL SA++ +I S+ ++PKGQW+AS +GL QT+ +I PQ Sbjct: 79 FGIDVSPWTAAALALTLFTSAFLVDIWCGSVEALPKGQWEASRCLGLDFGQTLYRVIAPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T++AS I E+ + + + TYQP ++ +A Y ++ Sbjct: 139 AMRIAIAPTVGFSVQVIKGTALASIIGFIELTKAGTMLNNVTYQPFKVFGLVALGYFLM- 197 Query: 204 SFCY 207 CY Sbjct: 198 --CY 199 >gi|256851551|ref|ZP_05556940.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus jensenii 27-2-CHN] gi|260660974|ref|ZP_05861889.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus jensenii 115-3-CHN] gi|282932630|ref|ZP_06338046.1| probable amino-acid ABC transporter permease protein [Lactobacillus jensenii 208-1] gi|297206366|ref|ZP_06923761.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus jensenii JV-V16] gi|256616613|gb|EEU21801.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus jensenii 27-2-CHN] gi|260548696|gb|EEX24671.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus jensenii 115-3-CHN] gi|281303262|gb|EFA95448.1| probable amino-acid ABC transporter permease protein [Lactobacillus jensenii 208-1] gi|297149492|gb|EFH29790.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus jensenii JV-V16] Length = 220 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/174 (35%), Positives = 104/174 (59%), Gaps = 3/174 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L+ ++VT+ ++ IS V+S IIG + IR + +S I+ + I R PLL+ + Sbjct: 14 RFLFEGLLVTVEVSIISIVLSYIIGLILGTIR-YMKIKYVSAIVGVIIDIIRNLPLLLII 72 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F ++G P +GI F A I +L + SA ++EI+R I ++P GQ + + + G+T Q Sbjct: 73 FFTYFGFPELGIHASPFWAAISALVIFESAMLAEIVRGGIQAVPDGQMEGARSNGMTYLQ 132 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTY 186 +R++I+PQ + L S+F+S++K TS+A+ I +PE+ AQ I S TTY Sbjct: 133 AMRYVIMPQAMHMMMPALLSQFVSLVKDTSLATIIILPELLYHAQIIYSQNTTY 186 >gi|307703835|ref|ZP_07640776.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus oralis ATCC 35037] gi|307622670|gb|EFO01666.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus oralis ATCC 35037] Length = 213 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/160 (34%), Positives = 90/160 (56%), Gaps = 1/160 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ Y+W+ RGTPLL+QL I+Y LP IGI D A +I+ LN++AY +EI R I + Sbjct: 50 LIDLYIWVMRGTPLLLQLIFIYYVLPSIGIRLDRLPAAVIAFVLNYAAYFAEIFRGGIET 109 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQ++A+ + + T+R+IILPQ + +E +S++K TS+ + I ++ Sbjct: 110 IPKGQYEAAKVLKFSPFDTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLI- 168 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 A R + L+ +YLI+ I+ ++E Sbjct: 169 LASRTAANRDASLVPMFLAGAIYLIMIGLVTIVAKRLEKK 208 >gi|241663975|ref|YP_002982335.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12D] gi|240866002|gb|ACS63663.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] Length = 222 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/157 (40%), Positives = 107/157 (68%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV RGTPLLVQLF++F+GLP I+ +FV ++ L + AY+SEI+R +I S+ +G Sbjct: 59 YVTFIRGTPLLVQLFLLFFGLPQFDILLPAFVCGVLGLGVYSGAYVSEIVRGAIQSVDRG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ +IG++ Q++R IILPQ + PL +EFI+++K++++ S +TI ++ Q+ Sbjct: 119 QMEAARSIGMSSAQSMRAIILPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQK 178 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 I+S +Y+ L +Y +A VYL+LTS + ++E ++ Sbjct: 179 IISVSYRSLEVYLAIALVYLVLTSAASYLLHRLERNI 215 >gi|282857320|ref|ZP_06266557.1| polar amino acid ABC transporter, inner membrane subunit [Pyramidobacter piscolens W5455] gi|282584820|gb|EFB90151.1| polar amino acid ABC transporter, inner membrane subunit [Pyramidobacter piscolens W5455] Length = 277 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 123/210 (58%), Gaps = 12/210 (5%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 ++ Y ++ +L + +S ++ I G +A++++ + S Y +FRGTPL+VQL Sbjct: 69 KVFYNGMINSLEVTFMSVIMGSICGTVLALLKVSRLGPL-SWFATAYTSVFRGTPLMVQL 127 Query: 75 FVIFYGLPHIGIVFD----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 F++++ P + FD +F A++++ LN +AY+SEI+R I SI GQ +A+ A+G+ Sbjct: 128 FLVYFATPQL---FDYQIPAFNAVVLTFGLNSAAYVSEILRGGIQSIDVGQREAAMALGV 184 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY---Q 187 + + I++PQ + T L +E I++LK TS+ +TI + ++ + AQ +++TY + Sbjct: 185 PYRAMMFDIVIPQALRTVLPSLVNELIALLKDTSIVATIGMLDMMRAAQTAMNSTYLAFE 244 Query: 188 PLIIYCELAFVY-LILTSFCYIIQIKIESS 216 P I+ + +V +I T+ ++ ++ S Sbjct: 245 PFIVVAGMYYVLVMIFTAVASRLERRLHKS 274 >gi|116627490|ref|YP_820109.1| ABC-type amino acid transport system, permease component [Streptococcus thermophilus LMD-9] gi|116100767|gb|ABJ65913.1| ABC-type amino acid transport system, permease component [Streptococcus thermophilus LMD-9] Length = 235 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 104/172 (60%), Gaps = 9/172 (5%) Query: 57 IMHFYVWIFRGTPLLVQLFVIF----YGLPHI--GIV---FDSFVAIIISLTLNFSAYIS 107 ++ YVW+FRGTP++VQ+ + F LP + GI+ V II L+LN AYIS Sbjct: 61 LVSLYVWVFRGTPMVVQIMIAFNLIHMNLPTVQFGILNLDLSRIVPGIIVLSLNSGAYIS 120 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E +R+ I SIPKGQ +A+Y++G+ T+R+++LPQ I L +EF++I+K +S+ Sbjct: 121 ESVRAGIESIPKGQIEAAYSLGIRPWNTMRYVVLPQAIKNILPALGNEFVTIIKDSSLLQ 180 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 TI + E++ AQ + +TTY L AF YLI+T+ + ++E + + Sbjct: 181 TIGVMELWNGAQTVATTTYLTLTPLLFAAFYYLIVTTAMTALLKQMEKRLGK 232 >gi|227890364|ref|ZP_04008169.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] gi|227849178|gb|EEJ59264.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] Length = 500 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/146 (36%), Positives = 92/146 (63%), Gaps = 6/146 (4%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ RGTP +VQ+ +++G+ ++ + VA II++ LN AY++E IRS I S+PKG Sbjct: 338 YIEFIRGTPQMVQILFVYFGIGYLISNLSALVAGIIAIGLNSGAYVAEDIRSGIDSLPKG 397 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++GL+R++ R++I+PQ I L +EFI++LK +S+ S I + E+ Q Sbjct: 398 QMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNEFITLLKDSSLVSVIGVAELMYQTQL 457 Query: 181 IVSTTYQ---PLIIYCELAFVYLILT 203 + ++TY+ PL I +Y I+T Sbjct: 458 VQTSTYKGVLPLFIAM---IIYFIMT 480 >gi|170699903|ref|ZP_02890932.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170135167|gb|EDT03466.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 222 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/157 (41%), Positives = 106/157 (67%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ FRGTPLLVQLF++F+GLP I+ +FV ++ L L +AY+SEI+R +I S+ +G Sbjct: 59 YLIFFRGTPLLVQLFLLFFGLPQFDILLPAFVCGMLGLGLYSAAYVSEIVRGAIQSVDRG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ +IG++ Q +R IILPQ I PL +EFI+++K++++ S +TI ++ Q+ Sbjct: 119 QMEAARSIGMSSGQAMRAIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQK 178 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 I+S +Y+ L +Y +A VYL+LT I ++E + Sbjct: 179 IISVSYRSLEVYIVIALVYLVLTQTTNFILHRVERRL 215 >gi|187735937|ref|YP_001878049.1| polar amino acid ABC transporter, inner membrane subunit [Akkermansia muciniphila ATCC BAA-835] gi|187425989|gb|ACD05268.1| polar amino acid ABC transporter, inner membrane subunit [Akkermansia muciniphila ATCC BAA-835] Length = 494 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 123/226 (54%), Gaps = 17/226 (7%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHF 60 + N + + + L +VT+ ++ S ++ +++GF +AVIR T ++ + Sbjct: 275 YVNFMQEGRWKYLTNGFLVTVEVSFFSVLLGILVGFVVAVIRATHDKTGNLRFLNALCKL 334 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF-----VAIIISLTLNFSAYISEIIRSSII 115 Y+ + RGTP++VQL +I++ ++F S + +++ N AY++EIIR I+ Sbjct: 335 YLTVIRGTPVVVQLLMIYF------VIFGSVDVSKVLVAVVAFGFNSGAYVAEIIRGGIM 388 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SI KGQ++A ++GL QT+ +IILPQ L +EFI +LK TSV+ I + ++ Sbjct: 389 SIDKGQFEAGRSLGLGYAQTMIYIILPQAFKNVLPSLGNEFIVLLKETSVSGYIALQDLT 448 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYL-ILTSFCYIIQIKIESSVTQH 220 + I S TY + +A +YL ++ F +++ K+E + + Sbjct: 449 KGGDIIRSQTYTAFMPLTAVALIYLSVVMLFSWMLG-KLERKLKNN 493 >gi|153012128|ref|YP_001373338.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151564016|gb|ABS17509.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 220 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/199 (33%), Positives = 110/199 (55%), Gaps = 3/199 (1%) Query: 7 NLIID--SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 N ++D F +L + TL + S V+S ++G A++R+ +S I V + Sbjct: 3 NFLMDIREFFPILLEGVKYTLLVTLGSLVLSTLLGLVWALMRVS-GIRWVSAIAAAIVNV 61 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RG P+LVQLF I++ LP GI + A II L + +SAY +E R+ I +I GQ +A Sbjct: 62 IRGIPILVQLFYIYFVLPEFGIALSALQAGIIGLGIAYSAYQAENFRAGIEAIDHGQTEA 121 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + +IG+ T+R +ILPQ + P + + +LK +S AS IT+ E+ Q + S+ Sbjct: 122 AQSIGMGWFMTMRRVILPQAVRVILPPYGNIMVMLLKDSSQASAITVAELTLQGQLLASS 181 Query: 185 TYQPLIIYCELAFVYLILT 203 T++ + +Y +A YL L+ Sbjct: 182 TFKNMSVYTLVAMFYLCLS 200 >gi|330939241|gb|EGH42644.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] Length = 216 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/152 (38%), Positives = 89/152 (58%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 TI+ + Y+ FR TPL+VQL+V+F+ LP GI F + +I L ++AYI+E R Sbjct: 49 TIVHRLSKGYLSFFRNTPLMVQLYVLFFALPLAGITFPAITTGVIGLGCYYAAYIAEAYR 108 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 +I IP GQW+A+ A+ R T R IILPQ + L + I + K T + + ITI Sbjct: 109 GAIDDIPAGQWEAARALDFNRGDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVITI 168 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PE+FQ A++I TY+ Y +A ++L ++ Sbjct: 169 PELFQAAKQIAGMTYRYNEPYTVMALMFLAIS 200 >gi|295398457|ref|ZP_06808496.1| amino acid ABC superfamily ATP binding cassette transporter [Aerococcus viridans ATCC 11563] gi|294973321|gb|EFG49109.1| amino acid ABC superfamily ATP binding cassette transporter [Aerococcus viridans ATCC 11563] Length = 506 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 119/206 (57%), Gaps = 10/206 (4%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + TL I+ + LIIG +A++R+ + ++ LI Y+ + RGTPL++Q+ ++ Sbjct: 305 GLKTTLVISATAIFFGLIIGAALALMRLS-ENKLVDLIAQAYIEVVRGTPLMIQVLFVYL 363 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G + + + + +++++LN AYI+EIIR I S+ KGQ +A+ ++GL T+R + Sbjct: 364 GFAGM-FGWSTMTSGLVAVSLNSGAYIAEIIRGGISSVDKGQAEAARSLGLGYWTTMRKV 422 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVST-TYQ---PLIIYCE 194 I PQ++ + L +EF+S++K +S+ STI + E+ FQT R VST T+ PLII Sbjct: 423 IFPQSLRSIWPSLGNEFVSLIKESSIVSTIGVAELTFQT--RNVSTITFNGIIPLIISMA 480 Query: 195 LAFVY-LILTSFCYIIQIKIESSVTQ 219 + F+ LT + + ++ Q Sbjct: 481 IYFMLTFTLTKLLNVYERRMNEKYAQ 506 >gi|289672940|ref|ZP_06493830.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae FF5] Length = 216 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/152 (38%), Positives = 89/152 (58%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 TI+ + Y+ FR TPL+VQL+V+F+ LP GI F + +I L ++AYI+E R Sbjct: 49 TIVHRLSKGYLSFFRNTPLMVQLYVLFFALPLAGITFPAITTGVIGLGCYYAAYIAEAYR 108 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 +I IP GQW+A+ A+ R T R IILPQ + L + I + K T + + ITI Sbjct: 109 GAIDDIPAGQWEAARALDFNRGDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVITI 168 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PE+FQ A++I TY+ Y +A ++L ++ Sbjct: 169 PELFQAAKQIAGMTYRYNEPYTVMALMFLAIS 200 >gi|238853899|ref|ZP_04644262.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus gasseri 202-4] gi|238833485|gb|EEQ25759.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus gasseri 202-4] Length = 498 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/154 (36%), Positives = 96/154 (62%), Gaps = 10/154 (6%) Query: 57 IMHF----YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 I+H+ Y+ RGTP +VQ+ +++G+ ++ + VA II++ LN AY++E IRS Sbjct: 327 ILHWLAVCYIEFIRGTPQMVQILFVYFGIGYLISNLSALVAGIIAIGLNSGAYVAEDIRS 386 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I S+PKGQ +A+ ++GL+R++ R++I+PQ I L +EFI++LK +S+ S I + Sbjct: 387 GIDSLPKGQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNEFITLLKDSSLVSVIGVA 446 Query: 173 EIFQTAQRIVSTTYQ---PLIIYCELAFVYLILT 203 E+ Q + ++TY+ PL I +Y I+T Sbjct: 447 ELMYQTQLVQTSTYKGVLPLFIAM---IIYFIMT 477 >gi|146306126|ref|YP_001186591.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina ymp] gi|145574327|gb|ABP83859.1| L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein [Pseudomonas mendocina ymp] Length = 231 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 6 FNLIIDSFPQLLYA-AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 FNLI+ S P LYA ++VT + I+ + L++ +A++R+ S +++ Y ++ Sbjct: 4 FNLILSSLP--LYASGLLVTFELLLIALALGLLLALPLALMRVSRSP-LVNFPAWLYTYV 60 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSII 115 RGTP+LVQLF+++YGL ++ DSF+ ++ +N SAY +EI+ S+ Sbjct: 61 IRGTPMLVQLFLLYYGLAQFDVIRDSFMWPYFSSATFCACLAFAINTSAYTAEILAGSLK 120 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 + P G+ +A+ A+G++R Q R I+LP + + S+E I +L +TS+AS +T+ ++ Sbjct: 121 ATPPGEIEAARAMGMSRAQLYRRILLPSAMRRALPQYSNEVIMMLHTTSLASLVTLIDLT 180 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I S Y P + YL+LT Sbjct: 181 GAARTISSQYYMPFEAFITAGLFYLVLT 208 >gi|313888661|ref|ZP_07822326.1| ABC transporter, permease protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845390|gb|EFR32786.1| ABC transporter, permease protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 256 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/237 (26%), Positives = 123/237 (51%), Gaps = 16/237 (6%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---------- 52 + W ++ + L + T+ IA + +I +IG IA++R + Sbjct: 6 FGWIGFLLKEYGPLFVEGTINTIIIAVVGTLIGFLIGLLIAIVRTTKVNKKSSAFKRVGL 65 Query: 53 -IISLIMHFYVWIFRGTPLLVQLFVIFYG-LPHIGIVFDSFVAIIISLTLNFSAYISEII 110 I+++I+ Y+ + RGTP++VQ + +YG L + + + + +I +++N AY++EII Sbjct: 66 KILNVIISIYIQVIRGTPMMVQAMMFYYGSLQYFNLNMAAMPSALIIVSVNTGAYMAEII 125 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R IIS+ +GQ + + +IG+T QT+ ++LPQ + + +EFI +K +SV + I+ Sbjct: 126 RGGIISVDRGQTEGALSIGMTHWQTMTEVVLPQAVRNIIPSVGNEFIVNIKDSSVLNVIS 185 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT----SFCYIIQIKIESSVTQHTYS 223 + E+F ++ T + ++ A +YL LT +++ K++ T Y Sbjct: 186 VSELFFISKSAAGTYLRYFEVFFITALIYLFLTISVSQAMKLVEKKLDGDGTYKIYG 242 >gi|116617263|ref|YP_817634.1| ABC-type amino acid transport system, permease component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096110|gb|ABJ61261.1| amino acid ABC transporter membrane protein, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 222 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 116/205 (56%), Gaps = 6/205 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++W + +++FP+L+ I +TL +A +S ++++++G I ++ F +I Sbjct: 1 MNFDW-HYFVNTFPELV-KYIPMTLLLAILSMLLAIVLGGIITLLH-FSHYKVIHWFASI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII---ISLTLNFSAYISEIIRSSIISI 117 YV FRG P LVQLF+I+YGLP I +F AII I L SAY+SE+ R+++ S+ Sbjct: 58 YVSFFRGMPALVQLFLIYYGLPQIFPIFKGLPAIIATVIGLGFKQSAYLSEVFRAAVNSV 117 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 +GQ +A ++ + + R++ILPQ + + F+ +LK TS+A T+ I E+F Sbjct: 118 DRGQIEAGQSLNIKSFKIFRYVILPQAFINALPATGNTFVGLLKETSLAFTLGITEVFAE 177 Query: 178 AQRIVSTTYQPLIIYCELAFVYLIL 202 + + +++ Y + Y +L Sbjct: 178 GKMLAGDSFKYFETYLAVGLTYWVL 202 >gi|89068767|ref|ZP_01156153.1| putative amino acid uptake ABC transporter permease protein [Oceanicola granulosus HTCC2516] gi|89045730|gb|EAR51792.1| putative amino acid uptake ABC transporter permease protein [Oceanicola granulosus HTCC2516] Length = 537 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/178 (33%), Positives = 100/178 (56%), Gaps = 11/178 (6%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSA 104 +S+ F + RG P+LV +++ GLP G+V S + II++ + +SA Sbjct: 362 LSVASEFLIDTLRGIPMLV--IILYIGLPLAGVVKSSTGGFIDPPNMLRGIIAMAIAYSA 419 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 Y++EI R+ I ++P GQ +A+ ++GL+R T RH+ILPQ P+ +EFI+ILK TS Sbjct: 420 YLAEIFRAGINAVPTGQIEAARSLGLSRWSTARHVILPQAFRIVIPPMGNEFIAILKDTS 479 Query: 165 VASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 + S ++I ++ Q + S ++ P Y A VY++LT + ++E QH + Sbjct: 480 LLSILSIRDLTQRMREFQSASFLPFAPYNTAAIVYVLLTLVAASLIARVEHRFRQHRH 537 >gi|242240917|ref|YP_002989098.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242132974|gb|ACS87276.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 292 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 114/213 (53%), Gaps = 22/213 (10%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +V TL +A ++ + ++ G IA I + ++ + Y WIFRGTPL++QL + F Sbjct: 75 GVVNTLVMAVLAMALGILFGV-IAAIMHMSPNPVLHYVSVGYAWIFRGTPLILQLLLWFN 133 Query: 80 ---GLPHIGI----------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P I + V F A ++ L++N AY SE++R+ ++S+ GQ++A+ Sbjct: 134 LALVFPRITLPGVFSVETVTVMTPFFAALLGLSINQGAYTSEVVRAGLLSVDIGQYEAAK 193 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 AIG+ R Q +R IILPQ + P+ +EFIS++K+TS+AS I E+ Q I Sbjct: 194 AIGMPRLQALRRIILPQAMRVIIPPVGNEFISMIKTTSLASMIQYSELLYNTQNIYYANA 253 Query: 187 QPLIIYCELAFV----YLILTSFCYIIQIKIES 215 + + EL FV YL++ + Q ++E Sbjct: 254 RVM----ELLFVAGIWYLMVVTVLSFGQNRLEK 282 >gi|239626406|ref|ZP_04669437.1| glutamine ABC transporter [Clostridiales bacterium 1_7_47_FAA] gi|239516552|gb|EEQ56418.1| glutamine ABC transporter [Clostridiales bacterium 1_7_47FAA] Length = 281 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 123/222 (55%), Gaps = 13/222 (5%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIF 65 N++ +P + A+ VTL + IS + I+G + ++ SD + I + Y+ I Sbjct: 60 NVLTQYYPSF-FKALGVTLQMTVISLFFATILGVIFGLFKV--SDFKALKFIANIYIDII 116 Query: 66 RGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 RGTPLLVQ+F+++YG+ + ++ +F A ++L+LN AY++EIIR I ++ Sbjct: 117 RGTPLLVQVFIMYYGVGSMLRPYGFQWNMIGGAFSAGCVTLSLNAGAYMAEIIRGGIEAV 176 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ +A+ ++GL+ + +R +ILPQ T + ++FI LK TS+ S I E+ Q Sbjct: 177 DKGQMEAARSLGLSYGKAMRKVILPQAFRTMLPTIINQFIISLKDTSLISVIGPRELTQN 236 Query: 178 AQRIVSTTYQPLI-IYCELAFVYLILTSFCYIIQIKIESSVT 218 ++ I + ++ IY +A YL++ + + +E V+ Sbjct: 237 SKIIAANASSMVMPIYLSVAIFYLVICTILSRVAKYVERRVS 278 >gi|330821515|ref|YP_004350377.1| amino-acid transmembrane ABC transporter protein [Burkholderia gladioli BSR3] gi|327373510|gb|AEA64865.1| amino-acid transmembrane ABC transporter protein [Burkholderia gladioli BSR3] Length = 223 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 65/183 (35%), Positives = 103/183 (56%), Gaps = 3/183 (1%) Query: 19 AAIVVTLPIACIS-FVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 AA T IA ++ F I ++IG + + R + ++ YV + RG P L+Q+ V Sbjct: 20 AAGAATTVIASVAAFAIGIVIGALLLLARQHGGRVAAACVL-AYVSLIRGVPALIQMLVA 78 Query: 78 FYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +Y LP + I A I++L LN +AYISEI+R ++ S+ +GQ A+ A+G++ Q Sbjct: 79 YYVLPALLDITLSPLQAGILALALNTAAYISEILRGALHSLGRGQIPAARALGMSPVQVW 138 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 RHI+ PQ S PL+SEF +LK++S+ S I + ++ A+ T QPL ++ A Sbjct: 139 RHIVFPQLFLRSIPPLTSEFTMLLKASSLLSIIAVHDLATVARDATLQTNQPLQVFSAAA 198 Query: 197 FVY 199 VY Sbjct: 199 AVY 201 >gi|312278008|gb|ADQ62665.1| Amino acid (Glutamine) ABC transporter, permease protein [Streptococcus thermophilus ND03] Length = 226 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 104/172 (60%), Gaps = 9/172 (5%) Query: 57 IMHFYVWIFRGTPLLVQLFVIF----YGLPHI--GIV---FDSFVAIIISLTLNFSAYIS 107 ++ YVW+FRGTP++VQ+ + F LP + GI+ V II L+LN AYIS Sbjct: 52 LVSLYVWVFRGTPMVVQIMIAFNLIHMNLPTVQFGILNLDLSRIVPGIIVLSLNSGAYIS 111 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E +R+ I SIPKGQ +A+Y++G+ T+R+++LPQ I L +EF++I+K +S+ Sbjct: 112 ESVRAGIESIPKGQIEAAYSLGIRPWNTMRYVVLPQAIKNILPALGNEFVTIIKDSSLLQ 171 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 TI + E++ AQ + +TTY L AF YLI+T+ + ++E + + Sbjct: 172 TIGVMELWNGAQTVATTTYLTLTPLLFAAFYYLIVTTAMTALLKQMEKRLGK 223 >gi|256844625|ref|ZP_05550110.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus 125-2-CHN] gi|262047083|ref|ZP_06020042.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus MV-3A-US] gi|295692449|ref|YP_003601059.1| glutamine ABC transporter, permease protein [Lactobacillus crispatus ST1] gi|312984303|ref|ZP_07791647.1| glutamine ABC transporter (membrane protein) [Lactobacillus crispatus CTV-05] gi|256613166|gb|EEU18370.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus 125-2-CHN] gi|260572660|gb|EEX29221.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus MV-3A-US] gi|295030555|emb|CBL50034.1| Glutamine ABC transporter, permease protein [Lactobacillus crispatus ST1] gi|310894321|gb|EFQ43399.1| glutamine ABC transporter (membrane protein) [Lactobacillus crispatus CTV-05] Length = 217 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 116/205 (56%), Gaps = 9/205 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W ++ + L + VT+ ++ IS +S ++G + ++R + +S I+ F + Sbjct: 8 YSWVDI------RFLLQGLWVTIYVSLISIALSFVVGLILGLVR-YMKIKYVSAIVGFII 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP +GIV + A I +L + A ++EI+RS I S+ GQ Sbjct: 61 DIIRNLPLLLIIFFTYFGLPQLGIVTNPTTASIAALVIFEGAMLAEIVRSGIGSVDSGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + G++ Q + H+I+PQ + L S+F+S++K TS+A+ I +PE+ AQ I Sbjct: 121 EGARSNGMSYGQAMYHVIMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLILTSFC 206 S LI +Y +A +Y I+ FC Sbjct: 181 SQNTTYLIPMYVIIAIMYFIVC-FC 204 >gi|163868114|ref|YP_001609318.1| ABC transporter, permease protein [Bartonella tribocorum CIP 105476] gi|161017765|emb|CAK01323.1| ABC transporter, permease protein [Bartonella tribocorum CIP 105476] Length = 235 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/234 (30%), Positives = 121/234 (51%), Gaps = 21/234 (8%) Query: 4 EWFNLIIDSFPQLLYA-------AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 EW I + P LL +VT+ + IS + +G IA R+ + + Sbjct: 4 EWLYFIFN--PDLLNRYGSKFIDGFIVTVELVSISCSLGFFLGMLIAFARLS-KNMFLQY 60 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP-------HIGIVF---DSFVAIIISLTLNFSAYI 106 + YV+ FRG+PLL QLF+ +YGL IG+ + +++ + TLN +AY Sbjct: 61 FANAYVYFFRGSPLLAQLFLFYYGLGSMNNFWQQIGLWWFFQNAWYCCLFIFTLNSAAYQ 120 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 SEI + S +S+ GQ +AS A+GL+ T +ILPQ + + PL +E I ++KS+++A Sbjct: 121 SEIFKGSFLSVTTGQREASKALGLSNSVTFFRVILPQAMIVALRPLGNELILMIKSSAIA 180 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S +T+ ++ A+ S T+ +Y A +YL + + + IE +T++ Sbjct: 181 SLVTVYDLMGIAKLTYSRTFD-FQVYVWAALIYLFIVELIHRFIVFIEHHLTRY 233 >gi|116629207|ref|YP_814379.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus gasseri ATCC 33323] gi|116094789|gb|ABJ59941.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus gasseri ATCC 33323] Length = 501 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 56/154 (36%), Positives = 96/154 (62%), Gaps = 10/154 (6%) Query: 57 IMHF----YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 I+H+ Y+ RGTP +VQ+ +++G+ ++ + VA II++ LN AY++E IRS Sbjct: 330 ILHWLAVCYIEFIRGTPQMVQILFVYFGIGYLISNLSALVAGIIAIGLNSGAYVAEDIRS 389 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I S+PKGQ +A+ ++GL+R++ R++I+PQ I L +EFI++LK +S+ S I + Sbjct: 390 GIDSLPKGQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNEFITLLKDSSLVSVIGVA 449 Query: 173 EIFQTAQRIVSTTYQ---PLIIYCELAFVYLILT 203 E+ Q + ++TY+ PL I +Y I+T Sbjct: 450 ELMYQTQLVQTSTYKGVLPLFIAM---IIYFIMT 480 >gi|330969959|gb|EGH70025.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 216 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 59/152 (38%), Positives = 89/152 (58%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 TI+ + Y+ FR TPL+VQL+V+F+ LP GI F + +I L ++AYI+E R Sbjct: 49 TIVHRLSKGYLSFFRNTPLMVQLYVLFFALPLAGITFPAVTTGVIGLGCYYAAYIAEAYR 108 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 +I IP GQW+A+ A+ R T R IILPQ + L + I + K T + + ITI Sbjct: 109 GAIDDIPAGQWEAARALDFNRSDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVITI 168 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PE+FQ A++I TY+ Y +A ++L ++ Sbjct: 169 PELFQAAKQIAGMTYRYNEPYTVMALMFLAIS 200 >gi|295111597|emb|CBL28347.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Synergistetes bacterium SGP1] Length = 226 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 60/182 (32%), Positives = 107/182 (58%), Gaps = 4/182 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ +A +S +++IGF +A R +++ ++ + FR TP + QLFV +YG Sbjct: 22 TVSMAFLSLFFAVLIGFVLAASR-YYNIPVLKQFSVVFTSFFRSTPFIAQLFVFYYGFAQ 80 Query: 84 IGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 + SF A++I L+L+F+AY+ E IR +I S+ +GQ++A +IG+T QTIR I+ Sbjct: 81 VSATVRGLSSFWAVVIVLSLSFAAYMGENIRGAISSVDRGQFEAGISIGMTPWQTIRRIV 140 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 +PQ + + + F ++ KSTS+A T+ + ++ A+ V+ TY+ L + L VY Sbjct: 141 IPQAARVALPGMVNSFANLFKSTSLAFTVGVMDMTSCAKNEVNLTYRYLEGFVALLIVYW 200 Query: 201 IL 202 ++ Sbjct: 201 VI 202 >gi|293604534|ref|ZP_06686939.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292817115|gb|EFF76191.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 217 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 115/202 (56%), Gaps = 8/202 (3%) Query: 4 EWFNLIIDSFPQLLYAA---IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 E+F + P LL A I+VTL S +S ++G A++R+ +T +S Sbjct: 3 EFFKDAAEYLPILLQGAKLTILVTLG----SLALSTVLGLVWALMRVS-GNTFLSKFSGG 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + + RG P++V LF I++ +P +G+ F + A II L + +SAY +E R+ I +I +G Sbjct: 58 VINLLRGIPIIVLLFYIYFVMPDMGVSFTAVQAAIIGLGVAYSAYQAENFRAGIQAIDRG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+G++ T+R ++LPQ + P + I +LK +S ASTIT+ E+ + Sbjct: 118 QIEAAMAMGMSWSMTMRRVVLPQAVKIVLPPYGNIMIMMLKDSSQASTITVAELALQGKL 177 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 I +T++ ++ +A +YL++ Sbjct: 178 IAVSTFKNATVFSLVALMYLVM 199 >gi|162448094|ref|YP_001621226.1| ABC transporter substrate-binding and permease [Acholeplasma laidlawii PG-8A] gi|161986201|gb|ABX81850.1| ABC-type transport system, substrate-binding and permease component [Acholeplasma laidlawii PG-8A] Length = 512 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 119/218 (54%), Gaps = 30/218 (13%) Query: 9 IIDSFPQLLYAAIVVTLPIACIS----FVISLII-------------GFFIAVIRIFFSD 51 +I + L + VTL +A I F++SLI+ GF IRI F Sbjct: 282 LIGKYVSLFIQGVGVTLLLAIIGTLGGFILSLILVWLKTQIVDKKRDGF----IRILFK- 336 Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYI 106 + S I Y+ +FRGTP++VQ + +YG + ++FD A +I + LN +AYI Sbjct: 337 RLTSGIATIYIVLFRGTPMIVQAMIFYYG---VKLIFDLSWWTPLSAGLIIVVLNTAAYI 393 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EI+R S+ +I KGQ +A+ ++G +R +++ +I+ PQ I + + +EFI LK T+V Sbjct: 394 AEILRGSMNAIDKGQMEAARSLGFSRVKSLLYIVYPQAIKNALPAIGNEFIVNLKDTAVL 453 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 S I + ++F +++V TY + + A +YL+LT Sbjct: 454 SVIGVLDLFNATRQVVGATYDTVTPFVITAIIYLVLTG 491 >gi|46908518|ref|YP_014907.1| amino acid ABC transporter permease [Listeria monocytogenes serotype 4b str. F2365] gi|47092446|ref|ZP_00230236.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 4b H7858] gi|254825077|ref|ZP_05230078.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194] gi|254994370|ref|ZP_05276560.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL J2-064] gi|300763904|ref|ZP_07073900.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL N1-017] gi|46881790|gb|AAT05084.1| amino acid ABC transporter, permease protein [Listeria monocytogenes serotype 4b str. F2365] gi|47019223|gb|EAL09966.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 4b H7858] gi|293594320|gb|EFG02081.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194] gi|300515245|gb|EFK42296.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL N1-017] gi|328465383|gb|EGF36630.1| amino acid ABC transporter, permease protein [Listeria monocytogenes 1816] gi|328471567|gb|EGF42447.1| amino acid ABC transporter, permease protein [Listeria monocytogenes 220] gi|332312771|gb|EGJ25866.1| L-cystine transport system permease protein tcyL [Listeria monocytogenes str. Scott A] Length = 238 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 125/227 (55%), Gaps = 15/227 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +I D P L + +TL I +S + I+G +++ RI+ ++ + Y+ FR Sbjct: 8 KMIADFIPTLA-GYLPITLYILALSLIFGFILGVLLSLPRIY-KIPVLDQLARVYISFFR 65 Query: 67 GTPLLVQLFVIFYGLPH----IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 GTP++VQLF++FYG+P +GI D A I + L+ +A I+E+IR+ + S+ Sbjct: 66 GTPIMVQLFIVFYGIPALSSIVGIDLSQMDPLYAAIATYALSSAATIAEVIRAGVNSVDA 125 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+Y+IGL+ +QT IILPQ + + + I LK TS+A +I + ++ Q Sbjct: 126 GQAEAAYSIGLSSRQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQ 185 Query: 180 RIVSTTYQPLIIYCELAFVY-----LILTSFCYIIQIKIESSVTQHT 221 +++ + L +Y L+ +Y L+ SF + I+ +++ T+ T Sbjct: 186 TLITLSNHALEVYISLSIIYYLTAVLLEYSFKW-IEKRVKKENTRFT 231 >gi|227512390|ref|ZP_03942439.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227084363|gb|EEI19675.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] Length = 190 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 118/200 (59%), Gaps = 14/200 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 ++L + ISF+ +LI+G F+ + ++ ++ ++ RG P+LV LF+I++G Sbjct: 1 MSLYLTAISFIGALILGLFLTLAQMS-RFKLLHWSARAFISFMRGVPMLVLLFIIYFGFG 59 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 ++ A +I+ T+N SA++SE+ RSS ++ +GQW+A+Y++GL + I +I P Sbjct: 60 A-----NALPAAVIAFTINCSAFVSEVFRSSFSAVDRGQWEAAYSLGLPYRTVIAKVIFP 114 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI-IYCELAFVYLI 201 Q + L + + + KSTS+A+ IT+ E+F A +I++ YQ + IY +A +Y Sbjct: 115 QAFKIAIPALGNILLDLFKSTSLAAMITVSEMFMDA-KIIAGAYQDYMSIYIVMAIIYWF 173 Query: 202 LTSFCYII---QIKIESSVT 218 FC+++ Q ++E ++T Sbjct: 174 ---FCWLMTVGQTQLEHALT 190 >gi|242279376|ref|YP_002991505.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242122270|gb|ACS79966.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 297 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 69/239 (28%), Positives = 122/239 (51%), Gaps = 29/239 (12%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D +L ++VTL ++ S +++L+ G + + R+ ++ +I YV + R P Sbjct: 56 DWRAGMLTQGLLVTLRLSLWSILLALVAGTIMGMWRVS-PRPLLRMISSSYVGLVRNIPP 114 Query: 71 LVQLFVIFY----------GLPHIGIVFD------------------SFVAIIISLTLNF 102 LV +F+ ++ G+ + D +F++ ++++ L Sbjct: 115 LVLIFIFYFFLGDQIMQATGITELSYSLDDSTSPILTTLFGPVEQLPAFLSGVLTMALFE 174 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AYI+EI+R+ I SI + QW+AS A+G R+ + HIILPQ + S PL+ +FIS +K Sbjct: 175 GAYITEIVRAGIESIDQEQWEASAALGFNRRNQLVHIILPQAFSRSLPPLAGQFISTIKD 234 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 +S+ S I+I E+ Q ++S TY+ I+ + +Y ILT C I K+E + H Sbjct: 235 SSIVSVISIQELTFAGQELMSATYRTFEIWSLVIIMYFILTFPCSIGVRKLEIKMNSHN 293 >gi|254173468|ref|ZP_04880141.1| amino acid ABC transporter permease protein [Thermococcus sp. AM4] gi|214032877|gb|EEB73706.1| amino acid ABC transporter permease protein [Thermococcus sp. AM4] Length = 225 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 62/213 (29%), Positives = 114/213 (53%), Gaps = 7/213 (3%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 ++ ++ + L +VVTL + + F+ +GF +AV R + + + Y+ + RG Sbjct: 1 MVWETIARYLLHGLVVTLELTVVGFIGGFALGFLLAVARTY-GGKLSKALSTAYIELIRG 59 Query: 68 TPLLVQLFVIFYGLPHI------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 TP+L+QL++I +GLP + V + +A + + +N +AY +E IR + S+ GQ Sbjct: 60 TPMLLQLYIIGFGLPLVIRNYFPHFVMNPTLAAALGMVINSAAYQAEYIRGAFNSVEYGQ 119 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++G+T+ IRH+I PQ ++E + +LK +S+A + +PE+ A Sbjct: 120 VEAALSLGMTKWGIIRHVIFPQAFRIMLPSWTNEMVYLLKYSSLAMLLAVPELMYQASVA 179 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S T+ IY +A +YL+ + I KIE Sbjct: 180 ASQTFLYAQIYLVVAGIYLVFATLIIGIMRKIE 212 >gi|16119458|ref|NP_396164.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15161996|gb|AAK90605.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 222 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 88/149 (59%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ I R TP L+Q+F+IF+ LP IG+ F A I++L++ F AY SEI+RS + SIP Sbjct: 59 YIEIIRNTPALLQIFIIFFVLPTIGLKFSPIHASIVALSIYFGAYASEILRSGLNSIPPS 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A +GLTR Q + I+LP I ++S+F+ +L TS+AS ++ E+F A Sbjct: 119 QIEAGVCLGLTRWQVLSRIVLPPAIRNIYPSMTSQFVLLLLGTSIASQVSTDELFHAAGF 178 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYII 209 I S TY+ +Y +Y L F I+ Sbjct: 179 IDSRTYRSFEVYALTCGIYFTLVVFFKIV 207 >gi|257063425|ref|YP_003143097.1| amino acid ABC transporter membrane protein [Slackia heliotrinireducens DSM 20476] gi|256791078|gb|ACV21748.1| amino acid ABC transporter membrane protein [Slackia heliotrinireducens DSM 20476] Length = 220 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 117/203 (57%), Gaps = 8/203 (3%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +T+ I I+ + +L +G +A+ R+ S ++L+ YV I RGTPL++QLFV + P Sbjct: 19 MTVRIFIITLIGALPLGVVVALCRMS-SFKPLALLARIYVSILRGTPLMLQLFVWMFA-P 76 Query: 83 H--IGIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 + G+ F + A I LN+SAY EI RS I SIP+GQ++A+ +G T+ QT Sbjct: 77 YYMFGLSFGPGWTMTACSIGFILNYSAYFGEIYRSGIQSIPRGQYEAAEVLGYTKVQTFM 136 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 +IILPQ I + +E I+++K TS+A + + E+F T + ++ + ++ Y A Sbjct: 137 YIILPQVIKRILPAMGNEIIALVKDTSLAFVLGVAEMF-TFAKALAAKHVSMLPYAIAAV 195 Query: 198 VYLILTSFCYIIQIKIESSVTQH 220 +Y I T F + KIE S++ + Sbjct: 196 IYWIFTLFVEFVLNKIEKSMSYY 218 >gi|167749245|ref|ZP_02421372.1| hypothetical protein EUBSIR_00196 [Eubacterium siraeum DSM 15702] gi|167657774|gb|EDS01904.1| hypothetical protein EUBSIR_00196 [Eubacterium siraeum DSM 15702] Length = 233 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 115/203 (56%), Gaps = 13/203 (6%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----ISLIMHFYVW 63 LI ++ + + I TL I+ + ++ +IG F+AV++ + I+ I YV+ Sbjct: 15 LIRENRYEFYLSGIGNTLLISLFAVILGFLIGAFVAVVKQLCAGRRGIGWIAKICDLYVF 74 Query: 64 IFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTP+LVQL +I L + G ++ VA ++ +N AY++EI+R+ I SI KGQ Sbjct: 75 VIRGTPVLVQLLLINAVLFNYRGA--NAIVAAVLCFGINSGAYVAEIVRAGIESIDKGQT 132 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A ++GL QT+ I+LPQ I L +EFI ++K TS+A I + +I + AQ + Sbjct: 133 EAGRSLGLGAGQTMWLIVLPQAIKNILPALGNEFIVLVKETSIAGYIAVTDITKAAQYVG 192 Query: 183 STTYQ---PLIIYCELAFVYLIL 202 S TY PL+I A YLIL Sbjct: 193 SKTYDLITPLLIA---AAFYLIL 212 >gi|330819468|ref|YP_004348330.1| transport system membrane protein [Burkholderia gladioli BSR3] gi|327371463|gb|AEA62818.1| transport system membrane protein [Burkholderia gladioli BSR3] Length = 220 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 12/208 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I + PQ+ + +TL S + L IGF A+ + + I Y+ +FRGT Sbjct: 9 ITHNLPQI-GGGLALTLGSWIASVALGLAIGFAAALAQQLGGRGARAAI-RVYIELFRGT 66 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P LVQLF+++YG P G+ D A I SL+L AY +E RS +IP G +A+ + Sbjct: 67 PFLVQLFLLYYGGPAFGLTLDPLPAGIASLSLYAGAYFTEAFRSGFAAIPAGHLEAAACL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLTR QTI I LPQ + L++ I + K T+V S +T+PE+ I S ++ Sbjct: 127 GLTRWQTIARIQLPQMLALILPALTNLTIVLSKETAVLSIVTVPELTFVLTGIGSASF-- 184 Query: 189 LIIYCELAFVYLILT-SFCYIIQIKIES 215 AFV +L S CY++ +++ + Sbjct: 185 -------AFVETLLALSVCYLLLVELAT 205 >gi|260889729|ref|ZP_05900992.1| amino acid ABC transporter, permease protein [Leptotrichia hofstadii F0254] gi|260860335|gb|EEX74835.1| amino acid ABC transporter, permease protein [Leptotrichia hofstadii F0254] Length = 218 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 56/159 (35%), Positives = 93/159 (58%), Gaps = 11/159 (6%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG-----IVFDSFVAIIISLTLNFSA 104 + I+ I+ Y WIFRGTPL++QL V++YG+P + IV ++A I+ +N++A Sbjct: 43 KNKIVKFIISVYTWIFRGTPLMLQLMVVYYGIPLMNFGGYKIVLAPYMAATITFIINYAA 102 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 Y+ EI+RS I SI KGQ +A+ +G + Q I ++ILPQ I L +E I+++K TS Sbjct: 103 YLVEIMRSGIESIDKGQHEAAKVLGYSYWQKIIYVILPQAIRRVLPTLGNEAITLIKDTS 162 Query: 165 VASTITIPEIFQTAQRIVSTTYQ------PLIIYCELAF 197 + + + E+ + + + + Y +IIY L+F Sbjct: 163 LVYVLAVTEVMKRTKELANIYYNVTPYICAIIIYLVLSF 201 >gi|282851008|ref|ZP_06260382.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] gi|311111018|ref|ZP_07712415.1| amino acid ABC transporter, permease/substrate-binding protein [Lactobacillus gasseri MV-22] gi|282557960|gb|EFB63548.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] gi|311066172|gb|EFQ46512.1| amino acid ABC transporter, permease/substrate-binding protein [Lactobacillus gasseri MV-22] Length = 498 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 56/154 (36%), Positives = 96/154 (62%), Gaps = 10/154 (6%) Query: 57 IMHF----YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 I+H+ Y+ RGTP +VQ+ +++G+ ++ + VA II++ LN AY++E IRS Sbjct: 327 ILHWLAVCYIEFIRGTPQMVQILFVYFGIGYLISNLSALVAGIIAIGLNSGAYVAEDIRS 386 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I S+PKGQ +A+ ++GL+R++ R++I+PQ I L +EFI++LK +S+ S I + Sbjct: 387 GIDSLPKGQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNEFITLLKDSSLVSVIGVA 446 Query: 173 EIFQTAQRIVSTTYQ---PLIIYCELAFVYLILT 203 E+ Q + ++TY+ PL I +Y I+T Sbjct: 447 ELMYQTQLVQTSTYKGVLPLFIAM---IIYFIMT 477 >gi|209546329|ref|YP_002278219.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539186|gb|ACI59119.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 222 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 110/204 (53%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y+ F +ID P LL + L +A +++++IG +R + L++ Sbjct: 1 MNYKLDFTPVIDGLPSLLLGCLGTFL-LAICGMLLAIVIGIGGVALRDSALKPLRWLVIA 59 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 F V + R TP LVQ+F I++ LP GI D II+L +N AY EIIR + SIPK Sbjct: 60 F-VELIRNTPFLVQIFFIYFALPLTGIRLDPTPTAIIALGINGGAYAIEIIRGGVQSIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A A+GL + Q R IIL + L+S+F+ + +TS+AS I+ E+ +Q Sbjct: 119 GQMEAGLALGLHKAQVFRLIILKPALRAIYPSLTSQFVLLTLTTSIASAISAYELTSVSQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 RI S +++ +Y + Y +++ Sbjct: 179 RIESESFRSFEVYFTVTLFYFVIS 202 >gi|88601347|ref|YP_501525.1| amino acid ABC transporter permease [Methanospirillum hungatei JF-1] gi|88186809|gb|ABD39806.1| amino acid ABC transporter membrane protein 2, PAAT family [Methanospirillum hungatei JF-1] Length = 218 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 123/203 (60%), Gaps = 13/203 (6%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++++ +F +++TL + I+ I ++G +A R++ + S +MH Y F Sbjct: 8 FDIMVPAFAN----GLLITLALVAITAPIGFLLGVGVACGRVYGGKGL-SWLMHIYTIFF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG PLL+ LF++++GLP +GIV FVA ++ SAY SE IR SI+S+ +GQ A+ Sbjct: 63 RGCPLLLLLFILYFGLPSVGIVLTPFVASVLGFIFCNSAYNSEYIRGSILSVKEGQLIAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G+T+ Q I +I+LPQ + S +S+EFI ++K +S+A IT+ E+ A ++++T Sbjct: 123 KALGMTKNQAILNIVLPQALRRSIPGISNEFIYLIKYSSLAYMITVIEL-TGASKLIATK 181 Query: 186 YQPLIIYCE----LAFVYLILTS 204 Y Y E +A VYL+L + Sbjct: 182 Y---FAYNETFIAVAIVYLLLVT 201 >gi|328947350|ref|YP_004364687.1| polar amino acid ABC transporter, inner membrane subunit [Treponema succinifaciens DSM 2489] gi|328447674|gb|AEB13390.1| polar amino acid ABC transporter, inner membrane subunit [Treponema succinifaciens DSM 2489] Length = 224 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 105/175 (60%), Gaps = 10/175 (5%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 V+L + ++ + S+ + FI R+ + I++ I + ++ I RGTPL++QL +++ P Sbjct: 27 VSLEVFFLTLIFSVPLALFICFGRMS-AVKIVAGITNLFLLIIRGTPLMLQLIFVYFA-P 84 Query: 83 HI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 + GI FD F A I+++ +N++AY +EI R I SIP GQ++A+ +G T+ QT II Sbjct: 85 QMIFGIGFDRFTAAIVAMVINYAAYFAEIYRGGIQSIPFGQYEAAKVLGFTKNQTFFRII 144 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ----RIVSTTYQPLII 191 +PQ + P+ +E I+++K T++ + + E+F AQ R+VS PL I Sbjct: 145 IPQVVKRIIPPMGNEVITLVKDTALVQVLGVAELFHVAQTQSGRLVSV--MPLFI 197 >gi|220925011|ref|YP_002500313.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium nodulans ORS 2060] gi|219949618|gb|ACL60010.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 238 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 103/169 (60%), Gaps = 11/169 (6%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPH-------IGIVF---DSFVAIIISLTLNFS 103 + L+ Y+++FRGTPLLVQLF+I+YGL +G+ + + + +++L+LN Sbjct: 50 LGLLARGYIFVFRGTPLLVQLFLIYYGLGQFRYGLQALGLWWFFREPYWCALLALSLNTG 109 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AY +EI R ++++P G A A G++R +R + LP + +E IS++K+T Sbjct: 110 AYTAEIFRGGVLAVPHGALLAGRACGMSRLTLLRRVTLPLAARQALPAYGNEIISVVKAT 169 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIY-CELAFVYLILTSFCYIIQI 211 ++ASTITI E+ AQ++++ +++ L I+ C AF I+++ ++++ Sbjct: 170 ALASTITILELTGIAQKLIAQSFRALEIFLCAAAFYLAIVSAIIVLVRL 218 >gi|222086405|ref|YP_002544939.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221723853|gb|ACM27009.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 219 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 107/184 (58%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ +SF+ +G + +RI + + + + ++V +F+GTPLL+QLF+ F+GL Sbjct: 20 TILLSLVSFIGGGTVGAILLFLRIG-KNKVARIAVKYFVELFQGTPLLMQLFLAFFGLGL 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 GI +++A ++L L SA++ EI R + ++ KGQW+AS ++ + Q +R++ILPQ Sbjct: 79 FGIDVPAWLAAAVALILWSSAFLIEIWRGCVEAVAKGQWEASASLAMGYMQQMRYVILPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T++ S I E+ + I + T+QP +Y FV LI Sbjct: 139 ALRIAVPPTVGFSVQVVKGTALTSIIGFVELSKAGTIITNATFQPFTVY---GFVALIYF 195 Query: 204 SFCY 207 + C+ Sbjct: 196 ALCW 199 >gi|126668662|ref|ZP_01739613.1| amino acid ABC transproter, permease protein [Marinobacter sp. ELB17] gi|126626840|gb|EAZ97486.1| amino acid ABC transproter, permease protein [Marinobacter sp. ELB17] Length = 189 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 56/158 (35%), Positives = 95/158 (60%), Gaps = 3/158 (1%) Query: 65 FRGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 FRGTPLLVQLF+ +YGLP + V + A I+ LTL+FSAY++E IR++II + + Q Sbjct: 28 FRGTPLLVQLFLFYYGLPQLFSALTVINGVTATIMGLTLHFSAYMAESIRAAIIGVDRSQ 87 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ +IG+T Q +R I+LPQ + L + FI ++K+TS+A T+ + E+ Q+ Sbjct: 88 TEAALSIGMTNIQLMRRIVLPQATRVALPTLMNYFIDMIKATSLAFTLGVTELMGATQKE 147 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S ++ + A +Y ++ +Q +E+ + + Sbjct: 148 ASGSFLYFEAFIVAAVMYWVVVELLSQLQKYLETRLNK 185 >gi|307945341|ref|ZP_07660677.1| nopaline transport system permease protein NocQ [Roseibium sp. TrichSKD4] gi|307771214|gb|EFO30439.1| nopaline transport system permease protein NocQ [Roseibium sp. TrichSKD4] Length = 237 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 110/208 (52%), Gaps = 13/208 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +++T+ +A S L +GF IAV + S+ + + + Y IFRG P L+ LF+++Y Sbjct: 22 GVLITVSLAITSLPFGLFLGFIIAVAK-NSSEPSLKMAANIYTTIFRGLPELLTLFMVYY 80 Query: 80 GLP------------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 GL + I +SFVA +++L+ FS+Y SE S+ IP+GQ++ YA Sbjct: 81 GLQIAIREGIRLLGYDVQIDINSFVAGVVALSFVFSSYASEAFLSAFRGIPQGQYEGGYA 140 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL+ +T+R II+PQ I + L + ++ +LK T++ S + + +I + T + Sbjct: 141 LGLSHTKTMRLIIVPQLIRLALPALGNLWLVLLKDTALVSVVGLEDILREVGVAARNTKE 200 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIES 215 P + + +YLIL KIE Sbjct: 201 PFLFFGLACVLYLILAMISSAGLSKIEG 228 >gi|307701964|ref|ZP_07638972.1| amino acid ABC transporter, permease protein [Streptococcus mitis NCTC 12261] gi|307616609|gb|EFN95798.1| amino acid ABC transporter, permease protein [Streptococcus mitis NCTC 12261] Length = 213 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 5/205 (2%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRGTPLL 71 P LL A +TL + + + S+ +G IA +++ + + +++ Y+WI RGTPLL Sbjct: 8 LPSLLSGA-SMTLQVFALVLIFSIPLGVLIAFALQVHWKP--LHHLINIYIWIMRGTPLL 64 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +QL I+Y LP IGI D A II+ LN++AY +EI R I +IP GQ++A+ + + Sbjct: 65 LQLIFIYYVLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPNGQYEAAKVLKFS 124 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 T+R+IILPQ + +E +S++K TS+ + I ++ A R + L+ Sbjct: 125 PFATVRYIILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLI-LASRTAANRDASLVP 183 Query: 192 YCELAFVYLILTSFCYIIQIKIESS 216 +YLIL I+ K+E Sbjct: 184 MFLAGAIYLILIGIVTILAKKVEKK 208 >gi|300715446|ref|YP_003740249.1| amino acid ABC transporter permease [Erwinia billingiae Eb661] gi|299061282|emb|CAX58391.1| amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 222 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 62/191 (32%), Positives = 108/191 (56%), Gaps = 2/191 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 +P+LL + + VT+ + ++ V + +G A +R +++S + YV + R TP +V Sbjct: 14 WPELL-SGLWVTIQLTVLATVGGVSLGILGAALR-SGKPSLVSRLWGGYVELIRNTPFVV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I +GLP++G+ + A ++++ +N AY +EIIR+ I PKGQW+A +GLTR Sbjct: 72 QLFFIVFGLPNLGLKLTAGEAALLAMLINLGAYSTEIIRAGIQVTPKGQWEAGRVLGLTR 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT ++LP ++ L S+ I ++ +SV S ++ E+ A I S T+ +Y Sbjct: 132 LQTFMRVVLPPSLKRIYPALVSQCIIVMLGSSVVSQVSYEELTFAANLIQSRTFLSFEVY 191 Query: 193 CELAFVYLILT 203 +YL L+ Sbjct: 192 LVTTLIYLALS 202 >gi|225378343|ref|ZP_03755564.1| hypothetical protein ROSEINA2194_04004 [Roseburia inulinivorans DSM 16841] gi|225209780|gb|EEG92134.1| hypothetical protein ROSEINA2194_04004 [Roseburia inulinivorans DSM 16841] Length = 226 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/165 (34%), Positives = 100/165 (60%), Gaps = 1/165 (0%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I + V ++I+GF + I+ ++ ++ I+ Y+ + R TPLLVQLF I+YGLP Sbjct: 26 LTLRIGLLGIVFAIIVGFVCSTIQ-YYKVPVLRQIVAVYIELSRNTPLLVQLFFIYYGLP 84 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 IGI ++ + L +Y++E RS + +I Q +++Y++G+ R QT+R+IILP Sbjct: 85 KIGIQTNAEACGVAGLAFLGGSYMAEAFRSGLEAIEPIQTESAYSLGMNRCQTMRYIILP 144 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 Q ++ S + I +LK TSV S I++ ++ TA+ ++ Y+ Sbjct: 145 QAMSISVPAFVANVIFLLKETSVFSAISLMDLMFTAKDLIGLYYK 189 >gi|307727658|ref|YP_003910871.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307588183|gb|ADN61580.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 251 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 67/230 (29%), Positives = 133/230 (57%), Gaps = 14/230 (6%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++ F+ ++D+ QLL AA+ TL + S ++ ++ I +R+ + + Sbjct: 1 MNFD-FDFLLDTLRQLL-AAVPTTLGLFFCSLILGGLLSLVIVTMRVS-PHWLPNRFARA 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIR 111 Y+ +FRG+PLL+Q+F+++YG+ G++ +SF+ ++SL L + Y +EIIR Sbjct: 58 YILVFRGSPLLIQMFLVYYGMGQFGVIRESFLWPVLREPYLCAVLSLALCTAGYTAEIIR 117 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++++P GQ +A Y+IGL+ +R +I P + S+E + ++KST++AS +T+ Sbjct: 118 GGLMAVPAGQIEAGYSIGLSGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTV 177 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIK-IESSVTQH 220 E+ AQ+I+ TY+ ++ A +YL L +F + + +E+ +++H Sbjct: 178 WEVTGVAQQIIQQTYRTTEVFICAALIYLFL-NFVIVRALGLLETRLSRH 226 >gi|186475920|ref|YP_001857390.1| glutamine ABC transporter permease [Burkholderia phymatum STM815] gi|184192379|gb|ACC70344.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 218 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 117/210 (55%), Gaps = 7/210 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++ +++ D+ P LL A + L I + L +GF ++R + + ++ I Sbjct: 1 MQFD-LSVVADALPALLQGAKLTVL-ITVVGLAGGLAVGFLFGLMRAY-GNALMQKIAFV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV RGTP++VQ+ I++ LP + + D+ A ++S+ +N AYI+EI+R + +S+P+ Sbjct: 58 YVEFVRGTPIVVQVMFIYFALPVLLNVRVDAMTAAVVSIVVNSGAYIAEIVRGAFLSVPR 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G +A A+G+ + + +I P I L ++FI LK TS+ I + E+ + Q Sbjct: 118 GLKEAGLALGMPMWRVLAFVIGPVAIRRMTPSLGNQFIVSLKDTSLFIVIGVGELTRQGQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLIL---TSFC 206 I+++ ++ + I+ +A +YL + +FC Sbjct: 178 EIMASNFRAVEIWTAVAAIYLCMIGVLTFC 207 >gi|66046195|ref|YP_236036.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63256902|gb|AAY37998.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] Length = 216 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 59/152 (38%), Positives = 89/152 (58%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 TI+ + Y+ FR TPL+VQL+V+F+ LP GI F + +I L ++AYI+E R Sbjct: 49 TIVHRLSKGYLSFFRNTPLMVQLYVLFFALPLAGITFPAVTTGVIGLGCYYAAYIAEAYR 108 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 +I IP GQW+A+ A+ R T R IILPQ + L + I + K T + + ITI Sbjct: 109 GAIDDIPAGQWEAARALDFNRSDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVITI 168 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PE+FQ A++I TY+ Y +A ++L ++ Sbjct: 169 PELFQAAKQIAGMTYRYNEPYTVMALMFLAIS 200 >gi|269219726|ref|ZP_06163580.1| amino acid ABC transporter, permease protein [Actinomyces sp. oral taxon 848 str. F0332] gi|269210968|gb|EEZ77308.1| amino acid ABC transporter, permease protein [Actinomyces sp. oral taxon 848 str. F0332] Length = 219 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 95/175 (54%), Gaps = 2/175 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P L A+V T+ +A + SL IG A+IR + + + Y+ + R TPL+V Sbjct: 10 LPYFLEGALV-TVRVAAVGIAASLAIGLVCAIIR-YLDVPVAKRAVGLYIELSRNTPLIV 67 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I+YGLP G+V S + II L+ Y++E RS S+ QW+++ ++G+TR Sbjct: 68 QLFFIYYGLPKAGVVLSSEASAIIGLSFLGGGYMAEAFRSGFDSVGTIQWESAQSLGMTR 127 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 + ++I+PQ ++ S L + I ++K TSV S + + ++ A+ + Y Sbjct: 128 VNAMVYVIVPQALSRSVAALVANVIFLVKETSVVSVVALNDLVYVAREKIGNDYD 182 >gi|258405468|ref|YP_003198210.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] gi|257797695|gb|ACV68632.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] Length = 267 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 100/168 (59%), Gaps = 2/168 (1%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I+VT + ++ +SL++G + RI I++L YV + RG PLLVQLF I+Y Sbjct: 67 GILVTFEVTMLAIFLSLVVGLIAGLGRIS-RIPIVNLTASTYVEVVRGIPLLVQLFYIYY 125 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 L + F A II++T+ + AY+ EI R+ I SI GQ +A+ ++G +R QT+ ++ Sbjct: 126 ALGSF-MQVPPFFAAIIAMTVCYGAYMGEIFRAGIESIDYGQTEAARSLGFSRGQTMFYV 184 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 I+PQ + T P+ +EFI++LK TS+ S I + ++ + + + ++ Sbjct: 185 IIPQAMRTILPPVGNEFIALLKDTSLVSIIAVSDLLRRGREFATESFD 232 >gi|170289917|ref|YP_001736733.1| polar amino acid ABC transporter, inner membrane subunit [Candidatus Korarchaeum cryptofilum OPF8] gi|170173997|gb|ACB07050.1| polar amino acid ABC transporter, inner membrane subunit [Candidatus Korarchaeum cryptofilum OPF8] Length = 211 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 61/166 (36%), Positives = 97/166 (58%) Query: 39 GFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISL 98 G IA+ + +S++ + IFRG PLLV LF++F+GL GI + IIS Sbjct: 30 GLGIAIGILGSRKGFLSILARAFSSIFRGFPLLVTLFIVFFGLTDFGIYLSPTASAIISF 89 Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158 L SAYISE R +I+SI +GQ A+ AIG+ Q HII+PQ I + +S+E + Sbjct: 90 ILCSSAYISEYFRGAILSIDEGQSLAAKAIGMNETQEFLHIIVPQAIRRALPSISNEIVY 149 Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 +++ +S+A + + E++ A+ S ++PL I+ LA +YL +T+ Sbjct: 150 MVQYSSLAFAVGVQEVYSVAKSFNSLYFRPLEIFSILALIYLSMTA 195 >gi|124486251|ref|YP_001030867.1| hypothetical protein Mlab_1435 [Methanocorpusculum labreanum Z] gi|124363792|gb|ABN07600.1| polar amino acid ABC transporter, inner membrane subunit [Methanocorpusculum labreanum Z] Length = 255 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 61/188 (32%), Positives = 112/188 (59%), Gaps = 1/188 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ +VVT+ + ++ + L++G +AV R++ T + + YV FRG PLLV LF+ Sbjct: 40 LWDGLVVTIQLVLMTAPLGLLLGLLVAVSRVY-GPTPVKWLAKLYVIFFRGCPLLVLLFI 98 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GLP IGIV S+ + ++ L SAY SE +R + SI +GQ A+ ++G+T+ Q + Sbjct: 99 LYFGLPSIGIVLGSYFSALVGFILCNSAYNSEYLRGGLQSIKRGQLLAARSLGMTKAQGV 158 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 ++++PQ + + +S+EFI ++K +S+A + + E+ A+ I S + + + Sbjct: 159 MYVVVPQALRRALPGVSNEFIYLIKYSSLAYVVAVIELTGAAKIIASKYFMYFEAFAAVG 218 Query: 197 FVYLILTS 204 YLIL + Sbjct: 219 VFYLILVT 226 >gi|213692879|ref|YP_002323465.1| transcriptional regulator, Fis family [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524340|gb|ACJ53087.1| transcriptional regulator, Fis family [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459053|dbj|BAJ69674.1| putative ABC transporter permease component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 327 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 120/225 (53%), Gaps = 25/225 (11%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + I TL + IS V+++I+ +A++R + ++ + F++W FRGTP+ Sbjct: 61 FNENVLEGIRYTLELTVISMVVAIILSVILAIMRKSI-NPVLRGVSWFFIWFFRGTPVYT 119 Query: 73 QLFVIFYGL-----PHI--GIVFDS--------------FVAIIISLTLNFSAYISEIIR 111 QL IF+GL P I GI F S F A I L LN +AY+SEI+R Sbjct: 120 QL--IFWGLFAVLIPKISLGIPFTSVEFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVR 177 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + + ++ GQ +A+ A+G+ R +R I+LPQ + P +E I +LK+TS+ + + Sbjct: 178 AGLEAVDPGQTEAAKALGMNRTLIMRRIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPF 237 Query: 172 PEIFQTA-QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q A I + Y+P+ + F YL++TS ++Q ++E+ Sbjct: 238 TLELQFATNAIANRIYKPIPLLLVACFWYLLITSILMVVQSRLEA 282 >gi|187919540|ref|YP_001888571.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187717978|gb|ACD19201.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 250 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 101/169 (59%), Gaps = 9/169 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIR 111 Y+ +FRG+PLL+Q+F+++YG+ G++ +SF + ++SL L + Y +EIIR Sbjct: 58 YILVFRGSPLLIQMFLVYYGMGQFGVIRESFLWPVLREPYMCAVLSLALCTAGYTAEIIR 117 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++++P GQ +A Y+IGL+ +R +I P + S+E + ++KST++AS +T+ Sbjct: 118 GGLMAVPVGQIEAGYSIGLSGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTV 177 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E+ AQ+I+ TY+ ++ A +YL L + +E+ +++H Sbjct: 178 WEVTGVAQQIIQQTYRTTEVFICAALIYLFLNFVIVRLLGMLETRLSRH 226 >gi|88800986|ref|ZP_01116536.1| ABC-type arginine/histidine transport system, permease component [Reinekea sp. MED297] gi|88776253|gb|EAR07478.1| ABC-type arginine/histidine transport system, permease component [Reinekea sp. MED297] Length = 233 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 118/215 (54%), Gaps = 10/215 (4%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 +L + VVT+ + +S +I + +A++R + +I+ + + +IFRGTPLLVQL Sbjct: 16 ELYWDGAVVTVQMVFLSLLIGGALAVPLAIMRTS-KNKLINYPVWVFTYIFRGTPLLVQL 74 Query: 75 FVIFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 ++I+YG+ I I ++F +I+ LN +AY +EI R +I + P+G+ +A+ Sbjct: 75 YLIYYGVALIEGIQQTFWWAIFKEAFYPCLIAFVLNTAAYTTEIFRGAIEATPRGEIEAA 134 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A G++ + ++ IILP + S+E + +L ++++AST+TI ++ + I + Sbjct: 135 KAYGMSWGKRMKRIILPSAFRRAIPAYSNEVVFMLHASAIASTVTIADLLNAGRMIYARY 194 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y P + A VYL LT + +IE + H Sbjct: 195 YAPFDGFIFAALVYLCLTFGILAVFKQIEKRMLGH 229 >gi|320008607|gb|ADW03457.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces flavogriseus ATCC 33331] Length = 322 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 105/184 (57%), Gaps = 13/184 (7%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFY--------GLP-----HIGIVFDSFVAIIIS 97 + + S + Y+W FRGTP+ VQL + F +P + V F+ ++ Sbjct: 110 NPVTSWVAWLYIWFFRGTPVYVQLLLWFNLALIFPVLNIPFVYKDEMTDVMTPFMCALLG 169 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 L LN +AY++EI+R+ I S+ +GQ +AS+A+G+T+ +T+R ++LPQ + P +EFI Sbjct: 170 LALNEAAYMAEIVRAGIQSVDEGQTEASHALGMTQAKTMRRVVLPQALRVIIPPTGNEFI 229 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 ++LK++S+ +T E+ ++ +I ST+Y + + + Y+++TS + Q +E Sbjct: 230 NMLKTSSLVYAVTYNELLRSTSQIGSTSYAVMEMLFVASIWYIVMTSVFSVGQYYLERRY 289 Query: 218 TQHT 221 + T Sbjct: 290 ARGT 293 >gi|157369179|ref|YP_001477168.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157320943|gb|ABV40040.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 218 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 53/147 (36%), Positives = 89/147 (60%), Gaps = 3/147 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y +F+GTPLL+QLF+ F+GL GI + A ++LTL SA++ +I SI ++PKG Sbjct: 56 YSELFQGTPLLMQLFLAFFGLALFGIDVSPWTAAALALTLFTSAFLVDIWSGSIAALPKG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+AS+ +GL+ QT+ +I+PQ + + P + ++K T++AS I E+ + Sbjct: 116 QWEASHCLGLSFGQTLVRVIVPQAVRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTM 175 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCY 207 + + TYQP ++ +A Y ++ CY Sbjct: 176 LNNVTYQPFKVFGLVALGYFLM---CY 199 >gi|332702873|ref|ZP_08422961.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio africanus str. Walvis Bay] gi|332553022|gb|EGJ50066.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio africanus str. Walvis Bay] Length = 270 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 54/154 (35%), Positives = 95/154 (61%), Gaps = 1/154 (0%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEI 109 + I++++ YV + RG PLLVQLF ++Y L V D VA ++++++ + AY+ EI Sbjct: 101 GNRIVNVVASTYVEVVRGIPLLVQLFYVYYALGRYLQVPD-MVAAVLAMSVCYGAYMGEI 159 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R+ I SI KGQ +A+ ++G +++QT+ +ILPQ T P+ +EFI +LK TS+ S + Sbjct: 160 FRAGIQSIDKGQTEAARSLGFSKRQTMFLVILPQAWRTILPPVGNEFIMLLKDTSLVSIL 219 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + ++ + + S T+ Y +A +YL++T Sbjct: 220 AVTDMLRRGREFASETFYYFETYTLIALIYLVIT 253 >gi|325271439|ref|ZP_08137964.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] gi|324103421|gb|EGC00743.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] Length = 232 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 114/207 (55%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N+I ++ P + + ++ TL + IS L+ + ++R+ +++ Y ++ Sbjct: 5 YNVIWEALP-MYFGGLLNTLKLLAISLFFGLLGAIPLGLMRVS-RQPVVNFTAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDS-FVAIIISLT--------LNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V DS F ++ S T +N SAY +EII S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFEAVRDSVFWPLLSSATFCACLAFGINTSAYTAEIIAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G++R + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + Y P Y YL LT Sbjct: 183 AARTVNAQYYLPFEAYITAGVFYLCLT 209 >gi|253689674|ref|YP_003018864.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756252|gb|ACT14328.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 221 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 66/198 (33%), Positives = 109/198 (55%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ ++ +P+LL A + VT+ + ++ + + IG A +R T++S + YV + Sbjct: 7 FSALLPFWPELL-AGLWVTIELTVMATLGGIAIGICGAALR-SGKPTLLSRLWGIYVELI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP +VQLF I +GLP +G + A ++++ +N AY +EIIR+ I PKGQW+A+ Sbjct: 65 RNTPFVVQLFFIVFGLPSLGWKLTAGQAALLAMLINLGAYSTEIIRAGIQVTPKGQWEAA 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GLTR QT +ILP + L S+ I ++ +SV S ++ E+ A I S T Sbjct: 125 RVLGLTRVQTFLRVILPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFAANLIQSRT 184 Query: 186 YQPLIIYCELAFVYLILT 203 + +Y YL L+ Sbjct: 185 FLSFEVYLATTLCYLALS 202 >gi|300362096|ref|ZP_07058273.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] gi|300354715|gb|EFJ70586.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] Length = 544 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 48/130 (36%), Positives = 86/130 (66%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ RGTP +VQ+ +++G+ ++ + VA II++ LN AY++E IRS I S+PKG Sbjct: 381 YIEFIRGTPQMVQILFVYFGIGYLISNLSALVAGIIAIGLNSGAYVAEDIRSGIDSLPKG 440 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++GL+R++ R++I+PQ I L +EFI++LK +S+ S I + E+ Q Sbjct: 441 QMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNEFITLLKDSSLVSVIGVAELMYQTQL 500 Query: 181 IVSTTYQPLI 190 + ++TY+ ++ Sbjct: 501 VQTSTYKGVL 510 >gi|293375083|ref|ZP_06621373.1| ABC transporter, permease protein [Turicibacter sanguinis PC909] gi|292646277|gb|EFF64297.1| ABC transporter, permease protein [Turicibacter sanguinis PC909] Length = 220 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 112/196 (57%), Gaps = 2/196 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I+D + + + TL +A I+ +I G +A+I++ S I+ I Y+ I RGT Sbjct: 8 ILDQYWYVFLEGLGGTLSLAAITVFFGMIFGAVLAIIKLSKSK-IVQFISTAYIEIIRGT 66 Query: 69 PLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PLL+QL+ + LP ++ + I+I+L +N SAY++EIIR+ I ++ KGQ +A+ + Sbjct: 67 PLLLQLYFFWLFLPKYLPFEISDWTCIVIALVINSSAYVAEIIRAGIQAVDKGQMEAAKS 126 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ + II PQ + L +EFI ++K TS+AS I ++ + Q I S T++ Sbjct: 127 LGMSDVHMMTRIIFPQAVKNILPALGNEFIMMVKETSLASVFFINDLMTSYQMIKSATFK 186 Query: 188 PLIIYCELAFVYLILT 203 P+ A +Y I+T Sbjct: 187 PIAPLMITAVIYFIVT 202 >gi|237732340|ref|ZP_04562821.1| histidine transport system permease [Citrobacter sp. 30_2] gi|226907879|gb|EEH93797.1| histidine transport system permease [Citrobacter sp. 30_2] Length = 235 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 116/216 (53%), Gaps = 11/216 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 Y + +TL + S V+ I+ F+A+ R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 YTGVAITLWLLISSVVMGGILALFLAIGRVS-SNKFIQFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTDFLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSSFKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 P + A +YLI++ + K E QH S Sbjct: 199 PFTAFGIAAVLYLIISYVLISLFRKAEKRWLQHVSS 234 >gi|23465743|ref|NP_696346.1| permease protein of ABC transporter system [Bifidobacterium longum NCC2705] gi|227546355|ref|ZP_03976404.1| ABC superfamily ATP binding cassette transporter permease protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|23326428|gb|AAN24982.1| permease protein of ABC transporter system [Bifidobacterium longum NCC2705] gi|227213336|gb|EEI81208.1| ABC superfamily ATP binding cassette transporter permease protein [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 327 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 120/225 (53%), Gaps = 25/225 (11%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + I TL + IS V+++I+ +A++R + ++ + F++W FRGTP+ Sbjct: 61 FNENVLEGIRYTLELTVISMVVAIILSVILAIMRKSI-NPVLRGVSWFFIWFFRGTPVYT 119 Query: 73 QLFVIFYGL-----PHI--GIVFDS--------------FVAIIISLTLNFSAYISEIIR 111 QL IF+GL P I GI F S F A I L LN +AY+SEI+R Sbjct: 120 QL--IFWGLFAVLIPKISLGIPFTSVEFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVR 177 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + + ++ GQ +A+ A+G+ R +R I+LPQ + P +E I +LK+TS+ + + Sbjct: 178 AGLEAVDPGQTEAAKALGMNRTLIMRRIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPF 237 Query: 172 PEIFQTA-QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q A I + Y+P+ + F YL++TS ++Q ++E+ Sbjct: 238 TLELQFATNAIANRIYKPIPLLLVACFWYLLITSILMVVQSRLEA 282 >gi|288960220|ref|YP_003450560.1| ABC transporter permease protein [Azospirillum sp. B510] gi|288912528|dbj|BAI74016.1| ABC transporter permease protein [Azospirillum sp. B510] Length = 223 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 2/202 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y W + +L A + TL ++ V + IG +A +R+ ++ + F Sbjct: 1 MGYVWDFFAVARNADILLAGLGQTLLLSFCGIVAGVAIGGVLAAMRLSGRRSLSWPALAF 60 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +R TP LV F FYGLP G+ F A + +L + +A+ +E+ R I+S+ + Sbjct: 61 TE-FYRNTPPLVHFFWFFYGLPMAFGLTLPPFAAALAALGIQSAAFFAEVFRGGILSVER 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A A+G+ R + +R IILPQ A P ++K+T++A+ + E +A Sbjct: 120 GQWEAGRALGMGRARLMRRIILPQAARRMAAPFVERSFELVKTTTLAAALAFHETIYSAM 179 Query: 180 RIVSTTYQPLIIYCELAFVYLI 201 IV+ TY+PL +Y +A ++ I Sbjct: 180 VIVTQTYRPLEVYTVVAGLFFI 201 >gi|288935411|ref|YP_003439470.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|288890120|gb|ADC58438.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] Length = 218 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 53/154 (34%), Positives = 92/154 (59%), Gaps = 3/154 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + ++ Y+ +F+GTPLL+QLF+ F+G+ GI ++ A ++LTL SA++ +I S Sbjct: 49 VKRLIRGYIELFQGTPLLMQLFLAFFGVALFGIDVSAWTAASVALTLYTSAFLLDIWFGS 108 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++PKGQW+AS +GL+ QT+ ++ PQ + + P + ++K T++AS I E Sbjct: 109 IRALPKGQWEASRCLGLSFGQTLYRVVAPQALRIAIAPTVGFAVQVIKGTALASIIGFVE 168 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + + + + TYQP ++ +A Y IL CY Sbjct: 169 LTKAGTMLTNVTYQPFKVFALVALGYFIL---CY 199 >gi|241895500|ref|ZP_04782796.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] gi|241871246|gb|EER74997.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] Length = 220 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 54/155 (34%), Positives = 94/155 (60%), Gaps = 9/155 (5%) Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG P+LV LFVI++G +F A +I+ T++ SA++SE+ RSS +++ +GQWDA+ Sbjct: 73 RGVPMLVILFVIYFGFQT-----AAFPAAVIAFTISSSAFVSEVYRSSFLAVGQGQWDAA 127 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y++GL ++ +R +I PQ S L + + + K TS+A+ IT+ E+F AQ I Sbjct: 128 YSLGLPYRKVVRKVIFPQVFRISIPALGNILLDLFKGTSLAAMITVSEMFMKAQIIAGAD 187 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + IY +A +Y FC+++ I ++++ +H Sbjct: 188 QDYMTIYIMIAILYWF---FCWLMTIA-QTTLEKH 218 >gi|271501780|ref|YP_003334806.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270345335|gb|ACZ78100.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 221 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 65/197 (32%), Positives = 109/197 (55%), Gaps = 10/197 (5%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 +P+LL A + VT+ + ++ + + IG A +R T +S + YV R TP +V Sbjct: 14 WPELL-AGLWVTVQLTVMATLGGIAIGICGAALR-SGKPTFVSRLWGLYVEAIRNTPFVV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I +GLP +G+ + A ++++ +N AY +EIIR+ I PKGQW+A+ +GL+R Sbjct: 72 QLFFIVFGLPGLGLKLTAGQAALLAMLVNLGAYSTEIIRAGIQVTPKGQWEAARVLGLSR 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT +ILP + L S+ I ++ +SV S ++ E+ A I S T+ Sbjct: 132 TQTFTRVILPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFAANLIQSRTF------ 185 Query: 193 CELAFVYLILTSFCYII 209 L+F ++T+ CY++ Sbjct: 186 --LSFEVYLVTTLCYLV 200 >gi|222106503|ref|YP_002547294.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221737682|gb|ACM38578.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 216 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 95/143 (66%), Gaps = 2/143 (1%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ +F+GTPLL+QLFV++YG+ +G+ D+++A+ I+ TL+ SA++ +I R I ++PKG Sbjct: 55 YIAVFQGTPLLMQLFVVYYGVALLGLDVDAWIAVAIAFTLHASAFLGDIWRGGIQAVPKG 114 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF-ISILKSTSVASTITIPEIFQTAQ 179 Q +A+ A+GL ++ ++LPQ S +P + F + ++K TS+A+ + E+ + Q Sbjct: 115 QTEAAKALGLHYGSIMKDVVLPQAFKVS-LPATIGFLVQLIKGTSLAAIVGFVELSRAGQ 173 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 + + T++PL ++ + +Y ++ Sbjct: 174 IVSNQTFRPLTVFAIVGIIYFLI 196 >gi|206580810|ref|YP_002238437.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|290509461|ref|ZP_06548832.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55] gi|206569868|gb|ACI11644.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|289778855|gb|EFD86852.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55] Length = 218 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 53/154 (34%), Positives = 92/154 (59%), Gaps = 3/154 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + ++ Y+ +F+GTPLL+QLF+ F+G+ GI ++ A ++LTL SA++ +I S Sbjct: 49 VKRLIRGYIELFQGTPLLMQLFLAFFGVALFGIDVSAWTAASVALTLYTSAFLLDIWFGS 108 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++PKGQW+AS +GL+ QT+ ++ PQ + + P + ++K T++AS I E Sbjct: 109 IRALPKGQWEASRCLGLSFGQTLYRVVAPQALRIAIAPTVGFAVQVIKGTALASIIGFVE 168 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + + + + TYQP ++ +A Y IL CY Sbjct: 169 LTKAGTMLTNVTYQPFKVFALVALGYFIL---CY 199 >gi|163793472|ref|ZP_02187447.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199] gi|159181274|gb|EDP65789.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199] Length = 205 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 68/200 (34%), Positives = 112/200 (56%), Gaps = 7/200 (3%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI- 86 A IS I +IG + T+ L+ YV R PLL+ +F +++GLP IGI Sbjct: 12 AVISLAIGTVIGLVCGYAFRTNNKTLRGLVWG-YVEFIRNEPLLLLIFFVYFGLPAIGIR 70 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 FD + + +I+L++ AY++E+ R+ + S+P+ +A+ AIGL QT +++LP T Sbjct: 71 FFDKYESFVITLSIYAGAYLTEVFRAGLTSVPERYVEAAKAIGLKPWQTQLYVVLPLTFR 130 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFC 206 LS+ IS+ K TS+A+ I IPE+ TA++I + TY+ + + + +YL + C Sbjct: 131 IVLPSLSNNLISLFKDTSLATAIAIPELTFTARQINANTYRVMEAWLTASLLYL---ATC 187 Query: 207 YIIQIKIESSVTQHTYSVDK 226 Y+I I + + YSV K Sbjct: 188 YLIAIALRQ--IEKRYSVIK 205 >gi|55377276|ref|YP_135126.1| amino acid ABC transporter permease [Haloarcula marismortui ATCC 43049] gi|55230001|gb|AAV45420.1| amino acid ABC transporter permease protein [Haloarcula marismortui ATCC 43049] Length = 325 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 114/199 (57%), Gaps = 17/199 (8%) Query: 29 CISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY--------- 79 C+ F ++L + +V+R++ L + Y + RGTPLL QLFV+++ Sbjct: 120 CLGFALALPL----SVVRVYGGRWARWLALS-YTELIRGTPLLAQLFVLYFATSLTQVLR 174 Query: 80 GLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 G+P +G+ F +F +IS TLN +AY SE +R+S+ S+ GQ A+ AIGL++ + I Sbjct: 175 GVPGVGVGFIPAQAFWVAVISFTLNSAAYQSEYLRASLDSVDGGQLTAARAIGLSKLEGI 234 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 R++++PQ + + ++E + ++K +S+AS IT+ E++ + + TYQ ++ +A Sbjct: 235 RYVVVPQGLRLALPSWTNELVYLIKYSSLASFITVQELYGRTSTLANETYQYTELFVLVA 294 Query: 197 FVYLILTSFCYIIQIKIES 215 +YL L + ++ES Sbjct: 295 ILYLALVVSASALMDRVES 313 >gi|17545201|ref|NP_518603.1| glutamate/aspartate transmembrane ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17427492|emb|CAD14010.1| probable glutamate/aspartate transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 242 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 109/197 (55%), Gaps = 11/197 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + T+ + S++I+L++G + V+R S + L YV +FR PL+VQLF+ Sbjct: 24 LLSGLKTTIALGLSSWIIALVLGSVLGVLRTVPSKALSGLATA-YVELFRNIPLIVQLFI 82 Query: 77 IFYGLPHIGIVFD----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 ++ +P + D F+ ++ L +A + E +RS I S+P+GQ +A Sbjct: 83 WYFVMPELVPGGDYIKQMNPATAMFLCAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGL 142 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G T QT RH++LP PL+SEF++I K+++VASTI + E+ +++V T Sbjct: 143 AMGFTLAQTYRHVMLPMAFRIIVPPLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTA 202 Query: 187 QPLIIYCELAFVYLILT 203 QP + + +Y+++ Sbjct: 203 QPYESFIAVTLMYMLIN 219 >gi|330836287|ref|YP_004410928.1| amino acid ABC transporter membrane protein, PAAT family [Spirochaeta coccoides DSM 17374] gi|329748190|gb|AEC01546.1| amino acid ABC transporter membrane protein, PAAT family [Spirochaeta coccoides DSM 17374] Length = 211 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 53/149 (35%), Positives = 91/149 (61%), Gaps = 1/149 (0%) Query: 54 ISLIMHFYVWIFRGTPLLVQ-LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +S +++ Y+ + RGTPL++Q LFV F G +D F A+II+ T+N++AY +EI R Sbjct: 44 LSAVVNAYIMVMRGTPLILQILFVYFAPYYLFGASYDRFTAVIIAFTVNYAAYFAEIYRG 103 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I SIPKGQ +A++ +G T QT I +PQ + + +E I+++K T++A TI + Sbjct: 104 GIQSIPKGQHEATHVLGFTPWQTFTRITMPQVVKRIIPSMGNEVITLVKDTALAQTIGVA 163 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 E+F+ AQ + + + I+ F +++ Sbjct: 164 ELFRVAQNASAREFSTMPIFMAGVFYFIM 192 >gi|91778283|ref|YP_553491.1| ABC amino acid transporter, inner membrane subunit [Burkholderia xenovorans LB400] gi|91690943|gb|ABE34141.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia xenovorans LB400] Length = 251 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 65/224 (29%), Positives = 126/224 (56%), Gaps = 11/224 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ + D+ QLL AA+ TL + S ++ ++ I +R+ + + Y+ +F Sbjct: 5 FDFLFDTLKQLL-AAVPTTLGLFFCSLILGGLLSLVIVTMRVS-PHWLPNRFARAYILVF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIIS 116 RG+PLL+Q+F+++YG+ G++ +SF + ++SL L + Y +EIIR +++ Sbjct: 63 RGSPLLIQMFLVYYGMGQFGVIRESFLWPVLREPYMCAVLSLALCTAGYTAEIIRGGLMA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P GQ +A Y+IGL+ +R +I P + S+E + ++KST++AS +T+ E+ Sbjct: 123 VPVGQIEAGYSIGLSGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 AQ+I+ TY+ ++ A +YL L + +E+ +++H Sbjct: 183 VAQQIIQQTYRTTEVFICAALIYLFLNFVIVRLLGLLETRLSRH 226 >gi|15901349|ref|NP_345953.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|111657054|ref|ZP_01407850.1| hypothetical protein SpneT_02001719 [Streptococcus pneumoniae TIGR4] gi|116516529|ref|YP_816792.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] gi|148984846|ref|ZP_01818099.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] gi|148988547|ref|ZP_01819980.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] gi|148992613|ref|ZP_01822281.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP9-BS68] gi|148997437|ref|ZP_01825042.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] gi|149003284|ref|ZP_01828180.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS69] gi|149008125|ref|ZP_01831656.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|149011737|ref|ZP_01832933.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP19-BS75] gi|149021769|ref|ZP_01835776.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP23-BS72] gi|168483888|ref|ZP_02708840.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC1873-00] gi|168489663|ref|ZP_02713862.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP195] gi|168492572|ref|ZP_02716715.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC0288-04] gi|168493402|ref|ZP_02717545.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC3059-06] gi|168575958|ref|ZP_02721873.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae MLV-016] gi|169832498|ref|YP_001694909.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae Hungary19A-6] gi|194398715|ref|YP_002038132.1| ABC transporter permease [Streptococcus pneumoniae G54] gi|221232215|ref|YP_002511368.1| amino acid ABC transporter permease [Streptococcus pneumoniae ATCC 700669] gi|225854945|ref|YP_002736457.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae JJA] gi|225857128|ref|YP_002738639.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae P1031] gi|225859260|ref|YP_002740770.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae 70585] gi|225861336|ref|YP_002742845.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae Taiwan19F-14] gi|237649208|ref|ZP_04523460.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CCRI 1974] gi|237821817|ref|ZP_04597662.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CCRI 1974M2] gi|298230582|ref|ZP_06964263.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255877|ref|ZP_06979463.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503238|ref|YP_003725178.1| amino acid ABC superfamily transporter permease [Streptococcus pneumoniae TCH8431/19A] gi|303254159|ref|ZP_07340272.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS455] gi|303260725|ref|ZP_07346685.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP-BS293] gi|303263052|ref|ZP_07348984.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS292] gi|303264456|ref|ZP_07350376.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS397] gi|303267434|ref|ZP_07353288.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS457] gi|303269791|ref|ZP_07355540.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS458] gi|307068147|ref|YP_003877113.1| amino acid ABC transporter permease [Streptococcus pneumoniae AP200] gi|307126931|ref|YP_003878962.1| amino acid ABC transporter permeae [Streptococcus pneumoniae 670-6B] gi|14972991|gb|AAK75593.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|116077105|gb|ABJ54825.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] gi|147756492|gb|EDK63533.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] gi|147758744|gb|EDK65741.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS69] gi|147760431|gb|EDK67409.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|147764168|gb|EDK71100.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP19-BS75] gi|147922868|gb|EDK73984.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] gi|147925748|gb|EDK76823.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] gi|147928630|gb|EDK79644.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP9-BS68] gi|147930005|gb|EDK80992.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP23-BS72] gi|168995000|gb|ACA35612.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae Hungary19A-6] gi|172042766|gb|EDT50812.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC1873-00] gi|183571981|gb|EDT92509.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP195] gi|183573305|gb|EDT93833.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC0288-04] gi|183576655|gb|EDT97183.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC3059-06] gi|183578303|gb|EDT98831.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae MLV-016] gi|194358382|gb|ACF56830.1| ABC transporter, permease protein [Streptococcus pneumoniae G54] gi|220674676|emb|CAR69249.1| putative amino acid ABC transporter permease protein [Streptococcus pneumoniae ATCC 700669] gi|225720386|gb|ACO16240.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae 70585] gi|225723987|gb|ACO19840.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae JJA] gi|225726193|gb|ACO22045.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae P1031] gi|225727461|gb|ACO23312.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae Taiwan19F-14] gi|298238833|gb|ADI69964.1| amino acid ABC superfamily ATP binding cassette transporter permease [Streptococcus pneumoniae TCH8431/19A] gi|301794515|emb|CBW36957.1| putative amino acid ABC transporter permease protein [Streptococcus pneumoniae INV104] gi|301800339|emb|CBW32968.1| putative amino acid ABC transporter permease protein [Streptococcus pneumoniae OXC141] gi|301802223|emb|CBW34973.1| putative amino acid ABC transporter permease protein [Streptococcus pneumoniae INV200] gi|302598885|gb|EFL65918.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS455] gi|302635815|gb|EFL66318.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS292] gi|302638128|gb|EFL68603.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP-BS293] gi|302640684|gb|EFL71082.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS458] gi|302643025|gb|EFL73318.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS457] gi|302646268|gb|EFL76495.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS397] gi|306409684|gb|ADM85111.1| ABC-type amino acid transport system, permease component [Streptococcus pneumoniae AP200] gi|306483993|gb|ADM90862.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae 670-6B] gi|327389686|gb|EGE88031.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA04375] gi|332072294|gb|EGI82777.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17570] gi|332073837|gb|EGI84315.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA41301] gi|332074251|gb|EGI84728.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17545] gi|332199546|gb|EGJ13621.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA41317] gi|332200062|gb|EGJ14135.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA47368] Length = 213 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 1/160 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +++ Y+W+ RGTPLL+QL I+Y LP IGI D A II+ LN++AY +EI R I + Sbjct: 50 LINIYIWVMRGTPLLLQLIFIYYVLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDT 109 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQ++A+ + + +R+IILPQ + +E +S++K TS+ + I ++ Sbjct: 110 IPRGQYEAAKVLKFSPFDRVRYIILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLI- 168 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 A R + L+ +YLIL II K+E Sbjct: 169 LASRTAANRDASLVPMFLAGAIYLILIGIVTIISKKVEKK 208 >gi|227509546|ref|ZP_03939595.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190908|gb|EEI70975.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 190 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 120/204 (58%), Gaps = 22/204 (10%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF----YVWIFRGTPLLVQLFVIF 78 ++L + ISF+ +LI+G F+ + ++ ++H+ ++ RG P+LV LF+I+ Sbjct: 1 MSLYLTAISFIGALILGLFLTLAQMSHFK-----LLHWPARAFISFMRGVPMLVLLFIIY 55 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 +G ++ A +I+ T+N SA++SE+ RSS ++ +GQW+A+Y++GL + I Sbjct: 56 FGFGA-----NALPAAVIAFTINCSAFVSEVFRSSFSAVDRGQWEAAYSLGLPYRTVIAK 110 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI-IYCELAF 197 +I PQ + L + + + KSTS+A+ IT+ E+F A +I++ YQ + IY +A Sbjct: 111 VIFPQAFRIAIPALGNILLDLFKSTSLAAMITVSEMFMDA-KIIAGAYQDYMSIYIVMAI 169 Query: 198 VYLILTSFCYII---QIKIESSVT 218 +Y FC+++ Q ++E ++T Sbjct: 170 IYWF---FCWLMTVGQTQLEHALT 190 >gi|227893086|ref|ZP_04010891.1| glutamine ABC superfamily ATP binding cassette transporter membrane protein [Lactobacillus ultunensis DSM 16047] gi|227865064|gb|EEJ72485.1| glutamine ABC superfamily ATP binding cassette transporter membrane protein [Lactobacillus ultunensis DSM 16047] Length = 217 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 116/205 (56%), Gaps = 9/205 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W ++ + L + VT+ ++ IS +S ++G + +IR + +S I+ F + Sbjct: 8 YSWVDI------RFLLQGLWVTIYVSLISIALSFVVGLILGLIR-YMKIKYVSAIVGFII 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP +GIV + A I +L + A ++EI+RS I S+ GQ Sbjct: 61 DIIRNLPLLLIIFFTYFGLPQLGIVTNPTTASIAALVIFEGAMLAEIVRSGIGSVDPGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + G++ Q + H+++PQ + L S+F+S++K TS+A+ I +PE+ AQ I Sbjct: 121 EGARSNGMSYGQAMYHVVMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLILTSFC 206 S LI +Y +A +Y I+ FC Sbjct: 181 SQNTTYLIPMYVIIAIMYFIVC-FC 204 >gi|167033609|ref|YP_001668840.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166860097|gb|ABY98504.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 219 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 64/173 (36%), Positives = 107/173 (61%), Gaps = 4/173 (2%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 ++ ++L + F W+ GTPLL+QL++I+YGL +GI + A II L+L+F+ Y + Sbjct: 46 LYAPRAMALPVRFVTWLLMGTPLLLQLYLIYYGLVQVGIDIPALAAGIIGLSLHFAVYNA 105 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 ++I+S I ++ GQ + + +IGL++ T R+II+PQ + + PL + I +LK TS+ S Sbjct: 106 DVIKSGIEAVDPGQIEGARSIGLSKAMTQRYIIVPQALRKTIAPLGNNLIVLLKDTSLVS 165 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVY----LILTSFCYIIQIKIESS 216 I I E+ +AQ VS TY P Y +A +Y L+L + ++I+ K+E S Sbjct: 166 IIGIAELVYSAQLAVSETYSPFEFYIAVAVIYYVANLVLEAGLHLIEAKVEMS 218 >gi|77406485|ref|ZP_00783540.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] gi|77174920|gb|EAO77734.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] Length = 213 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 102/167 (61%), Gaps = 4/167 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRG 67 I++ P LL A VTL + I +S+ +G +A ++++ F + ++ Y+WI RG Sbjct: 4 ILEILPSLLVGA-QVTLQVFFIXICLSIPLGIVVAFLMKVHFKP--LQWLLTTYIWIMRG 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL +Y LP +GI FD A II+ T+N++AY +EI R I SIPKGQ++A+ Sbjct: 61 TPLLLQLIFFYYFLPSVGISFDRMPAAIIAFTMNYAAYFAEIFRGGIESIPKGQYEAAKV 120 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 + ++ QT+ +I+LPQ + +E I+++K +S+ + + ++ Sbjct: 121 LKFSKFQTVWYIVLPQVFKIVLPSVFNETITLVKDSSLVYILGVGDL 167 >gi|116494831|ref|YP_806565.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus casei ATCC 334] gi|116104981|gb|ABJ70123.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus casei ATCC 334] Length = 485 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 63/180 (35%), Positives = 110/180 (61%), Gaps = 9/180 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ I +++G A++R+ + + LI Y+ RGTPL++Q+ +++G Sbjct: 290 TLLISAIGAFFGVLLGTIFALLRLS-KNKLSHLIGVSYIEFVRGTPLMIQVMFVYFG--- 345 Query: 84 IGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IGI D + +A +I+++LN +AY++EIIRS I SIP GQ +A+ ++GL+ +QT+ ++L Sbjct: 346 IGIFIDIPALIAGLIAVSLNSAAYVAEIIRSGIDSIPVGQTEAARSLGLSERQTMISVVL 405 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY---QPLIIYCELAFV 198 PQ I L +EFIS++K +S+ S I + ++ + + TY QP+++ L FV Sbjct: 406 PQAIKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLTVVQTATYKGVQPILVAMALYFV 465 >gi|307243525|ref|ZP_07525673.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM 17678] gi|306493081|gb|EFM65086.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM 17678] Length = 205 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/190 (30%), Positives = 109/190 (57%), Gaps = 4/190 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ + + L + ++ + S+ +G +A +R+ ++ I S + FY+WI RG+PLL+Q+ Sbjct: 1 MFEGVKILLELFFVTTIFSIPLGIVVAFVRLS-NNKIASSVSSFYIWIMRGSPLLLQMMF 59 Query: 77 IFYGLPHIG--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +Y LP I +VFD I+ +N++AY +EI R ++SI KGQ++A+ +G + Sbjct: 60 FYYVLPIISPKLVFDQLTVAFIAFVINYAAYYAEIFRGGLLSIDKGQFEAAKVLGFDKIT 119 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + IILPQ P+S+E I+++K TS+ + + ++ + A S L+ + Sbjct: 120 MYKRIILPQLTKRVLPPVSNELITLVKDTSLVYILGLNDLLRVATA-ASNREASLMPFAY 178 Query: 195 LAFVYLILTS 204 A +YL++T+ Sbjct: 179 AAVIYLVMTA 188 >gi|291561847|emb|CBL40647.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SS3/4] Length = 219 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 60/172 (34%), Positives = 107/172 (62%), Gaps = 5/172 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + ++++ I I+ + SL +G +A R+ + +IS+I+ FY+ I RGTPL++QL V Sbjct: 13 LASGMLISTQIFVITLLFSLPLGLIVAFGRLS-KNRVISMIVKFYISIMRGTPLMLQLMV 71 Query: 77 IFYG---LPHIGIVFD-SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 +++G L HI + A I +N++AY +EI RS I S+P GQ++A+ +G T+ Sbjct: 72 VYFGPYYLFHIKVGSGYRLTATFIGFVINYAAYFAEIYRSGIQSMPIGQYEAAQILGYTK 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 QT IILPQ I +++E I+++K TS++ T+++ E+F A+ + ++ Sbjct: 132 AQTFFKIILPQVIKRILPSITNEVITLVKDTSLSFTLSVAEMFTIAKALAAS 183 >gi|229015971|ref|ZP_04172932.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1273] gi|229022188|ref|ZP_04178738.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1272] gi|228739119|gb|EEL89565.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1272] gi|228745331|gb|EEL95372.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1273] Length = 218 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 58/176 (32%), Positives = 106/176 (60%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ + +V R PL++ F+ ++ LP IGI Sbjct: 25 SVIALIGSFILGVILAVMRIA-PIRILNWLGTAFVEFVRNIPLVLIAFIFYFALPVIGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 F+ FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + H++LPQ + Sbjct: 84 FNGFVAGTVALTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQAMYHVVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|320334509|ref|YP_004171220.1| polar amino acid ABC transporter inner membrane subunit [Deinococcus maricopensis DSM 21211] gi|319755798|gb|ADV67555.1| polar amino acid ABC transporter, inner membrane subunit [Deinococcus maricopensis DSM 21211] Length = 272 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 112/213 (52%), Gaps = 22/213 (10%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I S L V+TL + S VI LI+G +++ + I+ YVW+ RGTP Sbjct: 46 IGSRADLFVQGAVMTLYLTVASGVIGLILGVVAGLMKTS-AYWIVRAPASLYVWLMRGTP 104 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAI------------------IISLTLNFSAYISEIIR 111 LLVQ+ ++ LP ++F F A+ I +L LN AY +E+IR Sbjct: 105 LLVQILFVYNALP---LLFPPFKALMDWAGTWPIEGGPEIIAGITALALNVGAYNAEVIR 161 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + I ++P+GQ +A+ ++GL+ Q + IILPQ + PL + +++LK TS+ S+I + Sbjct: 162 AGIQAVPRGQGEAARSLGLSGGQAMLTIILPQALRIVVPPLVNNVVALLKDTSLVSSIAL 221 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 E+ R+ S T++P+ + VYL LT+ Sbjct: 222 LELTLAGNRVSSETFKPVPSLATIGGVYLALTT 254 >gi|326789990|ref|YP_004307811.1| polar amino acid ABC transporter inner membrane protein [Clostridium lentocellum DSM 5427] gi|326540754|gb|ADZ82613.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium lentocellum DSM 5427] Length = 219 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 101/178 (56%), Gaps = 1/178 (0%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I+ + L A +TL + + V+++++GF A+IR ++ I ++ Y+ + R TP Sbjct: 6 IERYVPLYVEAAKLTLTLGGVGIVLAVLVGFICAMIR-YYKIPIAKQVVGAYIELSRNTP 64 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+QLF ++YGLP +G+ + +I LT +Y++E RS + ++ K Q ++ +IG Sbjct: 65 LLIQLFFLYYGLPKLGVKISAETCAVIGLTFLGGSYMAEAFRSGLEAVSKSQIESGLSIG 124 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 L Q I+H+ILPQ + + + I +LK TS+ S + + ++ A+ ++ Y+ Sbjct: 125 LNEWQLIQHVILPQAFAVAMPGIGANIIFLLKETSIFSAVALADLMFVAKDLIGMYYK 182 >gi|293606208|ref|ZP_06688571.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292815355|gb|EFF74473.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 223 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 53/171 (30%), Positives = 102/171 (59%), Gaps = 1/171 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +A+V+T+ + ++++ +G +A++R I+SL F + R TPLLVQ++ Sbjct: 17 LGSALVITIEATVLGMLVAVTLGLALAMLR-RSRLRIVSLPTAFVIEFIRSTPLLVQMYF 75 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +FY LP G+ I++L L+++ Y +E+ R+ I ++P+GQW+A+ A+ ++R +T Sbjct: 76 LFYVLPLTGVQMSPLATGIVALGLHYATYCAEVYRAGIEAVPRGQWEAATALNMSRWRTA 135 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 ++LPQ I L + +++ K T + S IT+ E+ Q ++ I S T++ Sbjct: 136 VGVVLPQAIPPVVPALGNYLVAMFKDTPLLSAITVVELLQQSKMIGSATFR 186 >gi|269219463|ref|ZP_06163317.1| ABC amino acid transporter, permease component [Actinomyces sp. oral taxon 848 str. F0332] gi|269211042|gb|EEZ77382.1| ABC amino acid transporter, permease component [Actinomyces sp. oral taxon 848 str. F0332] Length = 372 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 118/220 (53%), Gaps = 24/220 (10%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ AI TL + + I +++ +A++R + I+ + FY+W FRGTP+ QL Sbjct: 111 IFRAIGWTLILTVAAMAIGIVLAILMAIMR-RSDNPIMRAVATFYIWFFRGTPVYTQL-- 167 Query: 77 IFYGL-----PHIGI---------------VFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 IF+GL P + + +F + V+ I+ L LN AY+SEIIRS + S Sbjct: 168 IFWGLIGVLYPRLSLGVPFGEEFFSFRTYDLFTAAVSAIVGLGLNEGAYLSEIIRSGLNS 227 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP-EIF 175 + KGQ +A+ A+G++ +Q + II+PQ + P +E IS+LK+TS+ + + E+ Sbjct: 228 VDKGQEEAAQALGMSPRQILYRIIIPQAMRVIVPPTGNETISMLKTTSLVTAVPFTFELT 287 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + A S T P+ A YL++TS I Q ++E+ Sbjct: 288 KVATDYGSQTLLPIPFLVVAAIWYLVITSVLMIGQARLEA 327 >gi|168487564|ref|ZP_02712072.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC1087-00] gi|183569640|gb|EDT90168.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC1087-00] Length = 213 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 1/160 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +++ Y+W+ RGTPLL+QL I+Y LP IGI D A II+ LN++AY +EI R I + Sbjct: 50 LINIYIWVMRGTPLLLQLIFIYYVLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDT 109 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQ++A+ + + +R+IILPQ + +E +S++K TS+ + I ++ Sbjct: 110 IPRGQYEAAKVLKFSPFDRVRYIILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLI- 168 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 A R + L+ +YLIL II K+E Sbjct: 169 LASRTAANRDASLVPMFLAGAIYLILIGIVTIISKKVEKK 208 >gi|209518061|ref|ZP_03266891.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209501467|gb|EEA01493.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 250 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 65/212 (30%), Positives = 122/212 (57%), Gaps = 12/212 (5%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++ F+ ++D+ QLL A+ TL + S V+ ++ I +R+ + + Sbjct: 1 MQFD-FDFLLDTLRQLL-GAVPATLGLFFCSLVLGGLLSLLIVTMRVS-PHWLPNRFARV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIR 111 Y+ +FRG+PLL+Q+F+++YG+ GI+ +SF+ ++SL L + Y +EIIR Sbjct: 58 YILVFRGSPLLIQMFLVYYGMGQFGIIRESFMWPVLRDPYMCAVLSLALCTAGYTAEIIR 117 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++++P GQ +A Y+IGL+ +R +I P + S+E + ++KST++AS +T+ Sbjct: 118 GGLMAVPVGQIEAGYSIGLSGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTV 177 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+ AQ+I+ TY+ ++ A +YL L Sbjct: 178 WEVTGVAQQIIQQTYRTTEVFICAALIYLFLN 209 >gi|23335783|ref|ZP_00121016.1| COG0765: ABC-type amino acid transport system, permease component [Bifidobacterium longum DJO10A] gi|189439798|ref|YP_001954879.1| amino acid ABC transporter permease [Bifidobacterium longum DJO10A] gi|312133204|ref|YP_004000543.1| hism6 [Bifidobacterium longum subsp. longum BBMN68] gi|317482550|ref|ZP_07941565.1| binding-protein-dependent transport system inner membrane component [Bifidobacterium sp. 12_1_47BFAA] gi|189428233|gb|ACD98381.1| ABC-type amino acid transport system permease component [Bifidobacterium longum DJO10A] gi|291517267|emb|CBK70883.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Bifidobacterium longum subsp. longum F8] gi|311772405|gb|ADQ01893.1| HisM6 [Bifidobacterium longum subsp. longum BBMN68] gi|316915972|gb|EFV37379.1| binding-protein-dependent transport system inner membrane component [Bifidobacterium sp. 12_1_47BFAA] Length = 331 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 120/225 (53%), Gaps = 25/225 (11%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + I TL + IS V+++I+ +A++R + ++ + F++W FRGTP+ Sbjct: 61 FNENVLEGIRYTLELTVISMVVAIILSVILAIMRKSI-NPVLRGVSWFFIWFFRGTPVYT 119 Query: 73 QLFVIFYGL-----PHI--GIVFDS--------------FVAIIISLTLNFSAYISEIIR 111 QL IF+GL P I GI F S F A I L LN +AY+SEI+R Sbjct: 120 QL--IFWGLFAVLIPKISLGIPFTSVEFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVR 177 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + + ++ GQ +A+ A+G+ R +R I+LPQ + P +E I +LK+TS+ + + Sbjct: 178 AGLEAVDPGQTEAAKALGMNRTLIMRRIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPF 237 Query: 172 PEIFQTA-QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q A I + Y+P+ + F YL++TS ++Q ++E+ Sbjct: 238 TLELQFATNAIANRIYKPIPLLLVACFWYLLITSILMVVQSRLEA 282 >gi|322690626|ref|YP_004220196.1| ABC transporter permease [Bifidobacterium longum subsp. longum JCM 1217] gi|320455482|dbj|BAJ66104.1| putative ABC transporter permease component [Bifidobacterium longum subsp. longum JCM 1217] Length = 327 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 120/225 (53%), Gaps = 25/225 (11%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + I TL + IS V+++I+ +A++R + ++ + F++W FRGTP+ Sbjct: 61 FNENVLEGIRYTLELTVISMVVAIILSVILAIMRKSI-NPVLRGVSWFFIWFFRGTPVYT 119 Query: 73 QLFVIFYGL-----PHI--GIVFDS--------------FVAIIISLTLNFSAYISEIIR 111 QL IF+GL P I GI F S F A I L LN +AY+SEI+R Sbjct: 120 QL--IFWGLFAVLIPKISLGIPFTSVEFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVR 177 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + + ++ GQ +A+ A+G+ R +R I+LPQ + P +E I +LK+TS+ + + Sbjct: 178 AGLEAVDPGQTEAAKALGMNRTLIMRRIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPF 237 Query: 172 PEIFQTA-QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q A I + Y+P+ + F YL++TS ++Q ++E+ Sbjct: 238 TLELQFATNAIANRIYKPIPLLLVACFWYLLITSILMVVQSRLEA 282 >gi|319937507|ref|ZP_08011912.1| hypothetical protein HMPREF9488_02748 [Coprobacillus sp. 29_1] gi|319807347|gb|EFW03956.1| hypothetical protein HMPREF9488_02748 [Coprobacillus sp. 29_1] Length = 226 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 62/188 (32%), Positives = 105/188 (55%), Gaps = 8/188 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 ++L +A I+ + LI+G A ++ I+ ++ + YV + RGTP+L+Q+ + +P Sbjct: 22 LSLLLAAIAVCLGLILGTLGAAAKLS-KYKILRILGNVYVEVIRGTPMLLQILFFYLAVP 80 Query: 83 HI-----GIVF--DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I G F D F+ +I+L++N AY +E+IRS I + KGQW+A IG+ QT Sbjct: 81 LIIQSITGERFNADPFICGLIALSINSGAYSTELIRSGIQGVDKGQWEACETIGMNYIQT 140 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +RH+ILPQ P+ SEFI+++K +S+ S I + E+ Q + + L+ Sbjct: 141 MRHVILPQAFKRIVPPIVSEFITLIKDSSLISCIGVSELLLRTQVMGANYSNYLVPLVTA 200 Query: 196 AFVYLILT 203 +YL +T Sbjct: 201 GCMYLAMT 208 >gi|271500964|ref|YP_003333989.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270344519|gb|ACZ77284.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 219 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 52/142 (36%), Positives = 90/142 (63%), Gaps = 2/142 (1%) Query: 64 IFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 I RGTP++VQ+ I++ LP + I D F A ++++ +N AYI+EI R S++SI KG Sbjct: 61 IIRGTPIVVQVMFIYFALPMLLTSIRIDPFSAAVVTIMINSGAYIAEITRGSVLSIHKGF 120 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A A+GL+R+ T+RH+I P + PL +++I +K TS+ I + E+ + Q I Sbjct: 121 TEAGLALGLSRRDTLRHVIAPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEI 180 Query: 182 VSTTYQPLIIYCELAFVYLILT 203 ++ ++ L I+ +A +YL++T Sbjct: 181 IAGNFRALEIWSAVAIIYLVIT 202 >gi|323529853|ref|YP_004232005.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323386855|gb|ADX58945.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 251 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 67/236 (28%), Positives = 135/236 (57%), Gaps = 14/236 (5%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++ F+ ++D+ QLL AA+ TL + S ++ ++ I +R+ + + Sbjct: 1 MNFD-FDFLLDTVKQLL-AAVPTTLGLFFCSLILGGLLSLVIVTMRVS-PHWLPNRFARA 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIR 111 Y+ +FRG+PLL+Q+F+++YG+ G++ +SF+ ++SL L + Y +EIIR Sbjct: 58 YILVFRGSPLLIQMFLVYYGMGQFGVIRESFLWPVLREPYLCAVLSLALCTAGYTAEIIR 117 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++++P GQ +A Y+IGL+ +R +I P + S+E + ++KST++AS +T+ Sbjct: 118 GGLMAVPVGQIEAGYSIGLSGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTV 177 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIK-IESSVTQHTYSVDK 226 E+ AQ+I+ TY+ ++ A +YL L +F + + +E+ +++H + + Sbjct: 178 WEVTGVAQQIIQQTYRTTEVFICAALIYLFL-NFVIVRALGLLEARLSRHLRAAPR 232 >gi|328884996|emb|CCA58235.1| ABC-type amino acid transport system, permease component [Streptomyces venezuelae ATCC 10712] Length = 316 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 112/201 (55%), Gaps = 14/201 (6%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF-----YGL 81 I+ S + L++G AV+R+ + + + Y+W FRGTP+ VQL V F + Sbjct: 83 ISVSSMALGLVLGIVFAVMRLS-KNPVTGAVAWLYIWFFRGTPVYVQLLVWFNLSLIFEY 141 Query: 82 PHIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 ++G ++ + F+ ++ L LN AY++EI+R+ I S+ +GQ +A++A+G+++ Sbjct: 142 INLGPIYKNETVDVMTPFMVALLGLGLNEGAYMAEIVRAGIQSVDEGQTEAAHALGMSQT 201 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 +T+ ++LPQ + P +EFI++LK++S+ S + E+ + + I ST + + Sbjct: 202 KTMGRVVLPQAMRVIVPPTGNEFINMLKTSSLVSAVQYTELLRASSNIGSTAGAVMEMLF 261 Query: 194 ELAFVYLILTSFCYIIQIKIE 214 + YL LTS + Q +E Sbjct: 262 VASIWYLALTSVFSVGQYYLE 282 >gi|296160743|ref|ZP_06843557.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295889046|gb|EFG68850.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 251 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 65/224 (29%), Positives = 126/224 (56%), Gaps = 11/224 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ + D+ QLL AA+ TL + S ++ ++ I +R+ + + Y+ +F Sbjct: 5 FDFLFDTLKQLL-AAVPTTLGLFFCSLILGGLLSLVIVTMRVS-PHWLPNRFARAYILVF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIIS 116 RG+PLL+Q+F+++YG+ G++ +SF + ++SL L + Y +EIIR +++ Sbjct: 63 RGSPLLIQMFLVYYGMGQFGVIRESFLWPVLREPYMCAVLSLALCTAGYTAEIIRGGLMT 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P GQ +A Y+IGL+ +R +I P + S+E + ++KST++AS +T+ E+ Sbjct: 123 VPVGQIEAGYSIGLSGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 AQ+I+ TY+ ++ A +YL L + +E+ +++H Sbjct: 183 VAQQIIQQTYRTTEVFICAALIYLFLNFVIVRLLGLLETRLSRH 226 >gi|322688640|ref|YP_004208374.1| ABC transporter permease [Bifidobacterium longum subsp. infantis 157F] gi|320459976|dbj|BAJ70596.1| putative ABC transporter permease component [Bifidobacterium longum subsp. infantis 157F] Length = 331 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 120/225 (53%), Gaps = 25/225 (11%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + I TL + IS V+++I+ +A++R + ++ + F++W FRGTP+ Sbjct: 61 FNENVLEGIRYTLELTVISMVVAIILSVILAIMRKSI-NPVLRGVSWFFIWFFRGTPVYT 119 Query: 73 QLFVIFYGL-----PHI--GIVFDS--------------FVAIIISLTLNFSAYISEIIR 111 QL IF+GL P I GI F S F A I L LN +AY+SEI+R Sbjct: 120 QL--IFWGLFAVLIPKISLGIPFTSVEFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVR 177 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + + ++ GQ +A+ A+G+ R +R I+LPQ + P +E I +LK+TS+ + + Sbjct: 178 AGLEAVDPGQTEAAKALGMNRTLIMRRIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPF 237 Query: 172 PEIFQTA-QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q A I + Y+P+ + F YL++TS ++Q ++E+ Sbjct: 238 TLELQFATNAIANRIYKPIPLLLVACFWYLLITSILMVVQSRLEA 282 >gi|212697319|ref|ZP_03305447.1| hypothetical protein ANHYDRO_01887 [Anaerococcus hydrogenalis DSM 7454] gi|325848996|ref|ZP_08170506.1| putative arginine ABC transporter, permease protein ArtQ [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|212675768|gb|EEB35375.1| hypothetical protein ANHYDRO_01887 [Anaerococcus hydrogenalis DSM 7454] gi|325480640|gb|EGC83702.1| putative arginine ABC transporter, permease protein ArtQ [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 235 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 116/207 (56%), Gaps = 17/207 (8%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-------------TI 53 NLI D+ + L + TL + IS +++LI G IA+I+ + + I Sbjct: 11 NLIQDNNYKYLIDGLKTTLSVTLISLILALIFGMTIAIIKDYDKNLDKNDKGLKVTLIKI 70 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS-FVAIIISLTLNFSAYISEIIRS 112 +S I++ +V I RGTP +QL +I+ I DS F+ +++ T+N SAY+SE+ R Sbjct: 71 LSKILNIFVTIVRGTPSTIQLLIIY---NVILANTDSLFLVAVVTFTINSSAYMSEVFRG 127 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I S+ KG+ +A+ ++GL+ ++T + +++PQ + S L +E I++ K TS++ I + Sbjct: 128 GINSVDKGEIEAARSLGLSYEKTAKLVVIPQAMKNSLPALGNEVITLFKETSISGFIGLV 187 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVY 199 ++ + A I+S T+ I Y A +Y Sbjct: 188 DLTRGAGIIISRTFSAAIPYLAAALIY 214 >gi|308174445|ref|YP_003921150.1| glutamine ABC transporter permease [Bacillus amyloliquefaciens DSM 7] gi|307607309|emb|CBI43680.1| glutamine ABC transporter (permease) [Bacillus amyloliquefaciens DSM 7] Length = 218 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 62/163 (38%), Positives = 96/163 (58%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ ++TL +A +S ++S I G +R + +S ++ V R PLL+ +F Sbjct: 15 LWNGFLITLYVALVSIILSFIFGLAAGTLR-YAKIPAVSGVIAAIVETIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 F+ LP IGI + A I +LT+ SA +SEIIRS + S+ KGQ DA+ + GLT QT+ Sbjct: 74 TFFALPEIGIKLEITAAAITALTIFESAMLSEIIRSGLQSVEKGQIDAARSSGLTYTQTL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +++PQ + P+ S+FIS+LK TS+A I +PE+ AQ Sbjct: 134 FLVVMPQALRRMVPPIVSQFISLLKDTSLAVVIALPELIHNAQ 176 >gi|298486823|ref|ZP_07004879.1| ABC-type amino acid transport system, permease component [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158690|gb|EFH99754.1| ABC-type amino acid transport system, permease component [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 216 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 58/152 (38%), Positives = 90/152 (59%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 T++ + Y+ FR TPL+VQL+V+F+ LP GI F + +I L ++AYI+E R Sbjct: 49 TVVHRLSKGYLSFFRNTPLMVQLYVLFFALPLAGITFPAITTGVIGLGCYYAAYIAEAYR 108 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 +I IP GQW+A+ A+ +R T R IILPQ + L + I + K T + + ITI Sbjct: 109 GAIDDIPAGQWEAARALDFSRSDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVITI 168 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PE+FQ A++I TY+ Y +A ++L ++ Sbjct: 169 PELFQAAKQIAGMTYRYNEPYTVMALMFLAIS 200 >gi|296453673|ref|YP_003660816.1| Fis family transcriptional regulator [Bifidobacterium longum subsp. longum JDM301] gi|296183104|gb|ADG99985.1| transcriptional regulator, Fis family [Bifidobacterium longum subsp. longum JDM301] Length = 331 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 120/225 (53%), Gaps = 25/225 (11%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + I TL + IS V+++I+ +A++R + ++ + F++W FRGTP+ Sbjct: 61 FNENVLEGIRYTLELTVISMVVAIILSVILAIMRKSI-NPVLRGVSWFFIWFFRGTPVYT 119 Query: 73 QLFVIFYGL-----PHI--GIVFDS--------------FVAIIISLTLNFSAYISEIIR 111 QL IF+GL P I GI F S F A I L LN +AY+SEI+R Sbjct: 120 QL--IFWGLFAVLIPKISLGIPFTSVEFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVR 177 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + + ++ GQ +A+ A+G+ R +R I+LPQ + P +E I +LK+TS+ + + Sbjct: 178 AGLEAVDPGQTEAAKALGMNRTLIMRRIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPF 237 Query: 172 PEIFQTA-QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q A I + Y+P+ + F YL++TS ++Q ++E+ Sbjct: 238 TLELQFATNAIANRIYKPIPLLLVACFWYLLITSILMVVQSRLEA 282 >gi|317152558|ref|YP_004120606.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] gi|316942809|gb|ADU61860.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] Length = 218 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 117/200 (58%), Gaps = 4/200 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL ++ + ++ + +G A +RI ++ L Y+++ RGTPLL+QL I++GL Sbjct: 21 MTLKVSALGILLGVCLGLGTAFMRIS-PRRVLHLPARAYIYLVRGTPLLLQLLFIYFGLR 79 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + + + +++L ++ AYI+EI R +I+SI GQ +A+ ++G+ + + IILP Sbjct: 80 SLA-GLSALTSAVLALGIHNGAYIAEIFRGAIVSISNGQMEAARSLGMPYPRAMLRIILP 138 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + + L ++FI LK +S+ASTITI E+ +Q++ S+ + + + A YL Sbjct: 139 QALKRAVPSLGNQFIIALKDSSLASTITINELLLKSQQLASSNFMMMEMLFIAALFYLFY 198 Query: 203 TS-FCYIIQIKIESSVTQHT 221 T+ F ++ + ++ES + T Sbjct: 199 TAIFSWLFR-RLESRLDVST 217 >gi|313891398|ref|ZP_07825014.1| putative glutamine ABC transporter, permease protein GlnP [Dialister microaerophilus UPII 345-E] gi|313120173|gb|EFR43349.1| putative glutamine ABC transporter, permease protein GlnP [Dialister microaerophilus UPII 345-E] Length = 218 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 63/185 (34%), Positives = 103/185 (55%), Gaps = 9/185 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 +++ +L +D A + TL IA V+SL+ G FI+VIR + IIS I FY+ Sbjct: 7 FKYLHLFVD--------AGLTTLRIAFFGIVLSLLFGLFISVIR-YKKVPIISQICKFYI 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + R TPLLVQLF +++GLP GI + L ++Y++E RS + S+ K Q Sbjct: 58 ELSRNTPLLVQLFFLYFGLPKAGIHISGENCALSGLVFLGASYMAEAFRSGLESVAKSQI 117 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +++ A+G+ Q R II+PQ ++ S + + I ++K TSV S IP++ A+ ++ Sbjct: 118 ESAAALGMGEYQIFRFIIIPQAVSVSIPSVCANIIFLIKETSVFSVCAIPDLMYVAKDLI 177 Query: 183 STTYQ 187 Y+ Sbjct: 178 GLYYK 182 >gi|15903398|ref|NP_358948.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6] gi|182684457|ref|YP_001836204.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] gi|15459002|gb|AAL00159.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae R6] gi|182629791|gb|ACB90739.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] Length = 232 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 1/160 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +++ Y+W+ RGTPLL+QL I+Y LP IGI D A II+ LN++AY +EI R I + Sbjct: 69 LINIYIWVMRGTPLLLQLIFIYYVLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDT 128 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQ++A+ + + +R+IILPQ + +E +S++K TS+ + I ++ Sbjct: 129 IPRGQYEAAKVLKFSPFDRVRYIILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLI- 187 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 A R + L+ +YLIL II K+E Sbjct: 188 LASRTAANRDASLVPMFLAGAIYLILIGIVTIISKKVEKK 227 >gi|289625713|ref|ZP_06458667.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646322|ref|ZP_06477665.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 2250] gi|330869650|gb|EGH04359.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 216 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 58/152 (38%), Positives = 89/152 (58%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 TI+ + Y+ FR TPL+VQL+V+F+ LP GI F + +I L ++AYI+E R Sbjct: 49 TIVHRLSKGYLSFFRNTPLMVQLYVLFFALPLAGITFPAITTGVIGLGCYYAAYIAEAYR 108 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 +I IP GQW+A+ A+ R T R IILPQ + L + I + K T + + ITI Sbjct: 109 GAIDDIPAGQWEAARALDFNRGDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVITI 168 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PE+FQ A+++ TY+ Y +A ++L ++ Sbjct: 169 PELFQAAKQVAGMTYRYNEPYTVMALMFLAIS 200 >gi|239622358|ref|ZP_04665389.1| permease protein of ABC transporter system [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239514355|gb|EEQ54222.1| permease protein of ABC transporter system [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 345 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 120/225 (53%), Gaps = 25/225 (11%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + I TL + IS V+++I+ +A++R + ++ + F++W FRGTP+ Sbjct: 79 FNENVLEGIRYTLELTVISMVVAIILSVILAIMRKSI-NPVLRGVSWFFIWFFRGTPVYT 137 Query: 73 QLFVIFYGL-----PHI--GIVFDS--------------FVAIIISLTLNFSAYISEIIR 111 QL IF+GL P I GI F S F A I L LN +AY+SEI+R Sbjct: 138 QL--IFWGLFAVLIPKISLGIPFTSVEFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVR 195 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + + ++ GQ +A+ A+G+ R +R I+LPQ + P +E I +LK+TS+ + + Sbjct: 196 AGLEAVDPGQTEAAKALGMNRTLIMRRIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPF 255 Query: 172 PEIFQTA-QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q A I + Y+P+ + F YL++TS ++Q ++E+ Sbjct: 256 TLELQFATNAIANRIYKPIPLLLVACFWYLLITSILMVVQSRLEA 300 >gi|291616414|ref|YP_003519156.1| YckJ [Pantoea ananatis LMG 20103] gi|291151444|gb|ADD76028.1| YckJ [Pantoea ananatis LMG 20103] gi|327392854|dbj|BAK10276.1| probable amino-acid ABC transporter permease protein YckJ [Pantoea ananatis AJ13355] Length = 221 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 107/191 (56%), Gaps = 2/191 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 +P+LL + + VT+ + ++ V + IG A +R + +S + YV + R TP +V Sbjct: 14 WPELL-SGLWVTIQLTVLATVGGVSIGIIGAALR-SGKPSWLSRLWGLYVELIRNTPFVV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I +GLP++G+ + A ++++ +N AY +EIIR+ I PKGQW+A +GLTR Sbjct: 72 QLFFIVFGLPNLGLKLTAGEAALLAMLVNLGAYSTEIIRAGIQVTPKGQWEAGRVLGLTR 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT ++LP ++ L S+ I ++ +SV S ++ E+ A I S T+ +Y Sbjct: 132 SQTFLRVVLPPSLQRIYPALVSQCIIVMLGSSVVSQVSYEELTFAANLIQSRTFLSFEVY 191 Query: 193 CELAFVYLILT 203 +YL L+ Sbjct: 192 SVTTLIYLALS 202 >gi|163938357|ref|YP_001643241.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] gi|163860554|gb|ABY41613.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] Length = 230 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 74/221 (33%), Positives = 121/221 (54%), Gaps = 4/221 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A IV + SLI F A RI ++ I++ I H Y+ I Sbjct: 2 FEIFMSTYPTLLKATIVTLQLTLTSLLLGSLIGLLF-AFFRIS-NNKILNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ I IVF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSI-IVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGN 178 Query: 186 YQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQHTYSVD 225 +Q L Y + YL L F Y++ + + + SV Sbjct: 179 FQQLDTYIIVGVYYLALVLLFTYLVSLLEKRLQRKENNSVQ 219 >gi|238920485|ref|YP_002934000.1| glutamine ABC transporter permease protein [Edwardsiella ictaluri 93-146] gi|238870054|gb|ACR69765.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 218 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 121/204 (59%), Gaps = 4/204 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I D+ P LL A +TL I+ + + LIIG R F + + I Sbjct: 1 MQFDW-STIWDAIPLLLEGA-KLTLWISVLGLLGGLIIGLAAGFARAF-GGWLSNHIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 ++ + RGTP++VQ+ I++ LP + + D F A II++ +N AYI+EI R +++SI Sbjct: 58 FIELIRGTPIVVQVMFIYFALPMMMPLRIDPFSAAIITIMINSGAYIAEITRGAVLSIHS 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G +A A+GL+R+ T+RH+I+P + PL +++I +K TS+ I + E+ + Q Sbjct: 118 GFREAGLALGLSRRDTLRHVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I++ ++ + I+ +A +YLI+T Sbjct: 178 EIIAGNFRAMEIWSAVAVIYLIMT 201 >gi|190894697|ref|YP_001984990.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700358|gb|ACE94440.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 442 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 53/165 (32%), Positives = 97/165 (58%), Gaps = 4/165 (2%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +Y+ +F+GTPLL+QLF+ F+GL GI +++A ++L L +A+++EI R + S+ Sbjct: 278 YYIELFQGTPLLMQLFIAFFGLGLFGIDVPAWLAAGMALILWTAAFLAEIWRGCVESVAS 337 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+AS ++G+ R Q +R++ILPQ + + P + I+K T++ S I E+ + Sbjct: 338 GQWEASASLGMGRLQQMRYVILPQALRVAIPPTVGFSVQIIKGTALTSIIGFVELSKAGT 397 Query: 180 RIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIESSVTQH 220 + + T+QP +Y +A +Y L+ I++ K+ + H Sbjct: 398 VVTNATFQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHRNH 442 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 68/120 (56%), Gaps = 2/120 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++ +P ++ IV+TL + + V+ + +G F A +R + ++ YV + Sbjct: 7 FGWLLQYYPDII-KGIVITLELIAVGGVLGISLGIFCAWVRAL-GPAWLKPVVAAYVELI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP L+QLF IF+GLP IG+ A +++ +N AY EIIR+ I + PKGQ++A Sbjct: 65 RNTPFLIQLFFIFFGLPSIGLHLSELTAANLAMVVNLGAYSCEIIRAGIQATPKGQFEAG 124 >gi|167900039|ref|ZP_02487440.1| glutamine ABC transporter permease protein [Burkholderia pseudomallei 7894] Length = 235 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 102/177 (57%), Gaps = 10/177 (5%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIV 87 F++ +I G F A + +++++ Y+ + RGTP++VQ+ +++ LP H+ I Sbjct: 50 GFLVGMIAGMFRA-----YGPAVLNVLAQVYIELIRGTPIVVQVMFLYFALPLLAHVRI- 103 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 D A ++++TLN AY++E++R +++SIPKG +A A+GL+ + + I+ P Sbjct: 104 -DGLSAAVVAITLNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLVKIVGPLAFRR 162 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 PL ++ I LK S+ I + E+ + Q I++ +Q + I+ +A +YL+LT Sbjct: 163 LIAPLGNQCIVSLKDMSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAAIYLVLTG 219 >gi|322513521|ref|ZP_08066622.1| arginine ABC superfamily ATP binding cassette transporter, membrane protein [Actinobacillus ureae ATCC 25976] gi|322120674|gb|EFX92565.1| arginine ABC superfamily ATP binding cassette transporter, membrane protein [Actinobacillus ureae ATCC 25976] Length = 227 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 119/211 (56%), Gaps = 13/211 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLF 75 A I +P + +SL+I F +AV+ F + +I ++++ Y+ +F GTPLLVQ F Sbjct: 7 AVIAQGMPTSLSLTAVSLLIAFVLAVVFTFLLSMENKLIKVMVNGYLMLFTGTPLLVQFF 66 Query: 76 VIFYGLPHIGIVFDSFVAIIIS---------LTLNFSAYISEIIRSSIISIPKGQWDASY 126 +I++G + DSF +S L LN +AY +++ ++ +IPKGQW+ Sbjct: 67 LIYHGPGQFQWIVDSFAWQFLSDAWFCAALALALNSAAYSTQLFHGAVKAIPKGQWETCA 126 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+GL+R T++ I++P + + S+E I + K TS+ASTIT+ +I A+++ T Y Sbjct: 127 ALGLSRLDTLK-ILIPYALRRALPSYSNEIILVFKGTSLASTITLLDIMGYARQLYGTKY 185 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + IY +YL++T I+ ++E+ V Sbjct: 186 DAITIYGIAGAIYLVITGIMTILLRRVEAKV 216 >gi|229015747|ref|ZP_04172728.1| Amino acid ABC transproter, permease [Bacillus cereus AH1273] gi|229021947|ref|ZP_04178508.1| Amino acid ABC transproter, permease [Bacillus cereus AH1272] gi|228739362|gb|EEL89797.1| Amino acid ABC transproter, permease [Bacillus cereus AH1272] gi|228745552|gb|EEL95573.1| Amino acid ABC transproter, permease [Bacillus cereus AH1273] Length = 230 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 71/221 (32%), Positives = 122/221 (55%), Gaps = 4/221 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + I ++P LL A IV + SLI +A RI ++ +++ I H Y+ I Sbjct: 2 FEIFISTYPTLLKATIVTLQLTLTSLLLGSLIG-LLVAFFRIS-NNKVLNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGN 178 Query: 186 YQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQHTYSVD 225 +Q L Y + YL L F Y++ + + + T S+ Sbjct: 179 FQQLDTYIIVGVYYLALVLLFTYLVNLLEKRLQRKETNSIQ 219 >gi|148926584|ref|ZP_01810266.1| putative amino acid ABC tansporter permease protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845278|gb|EDK22372.1| putative amino acid ABC tansporter permease protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 181 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 111/190 (58%), Gaps = 15/190 (7%) Query: 36 LIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL----FVIFYGLPHIGIVFDSF 91 +IIGF +A++ F ++ I+ Y+ I RGTP+++QL FVIF D+ Sbjct: 1 MIIGFSLAILH-FSKFKTLNFIIDEYIDIIRGTPVILQLMIFAFVIF-------TFIDNL 52 Query: 92 VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP 151 A I++L LN SAYI+EI+RS I S+ KGQ +A+ A+GL K +++ IILPQ Sbjct: 53 YAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPA 112 Query: 152 LSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL-IIYCELAFVYLILTSFCYIIQ 210 L++EFIS+ K TSV I++ +I +Q + + Y P II+ L + Y+ + F Y + Sbjct: 113 LANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNPKPIIFTGLVY-YVSVKIFSYFAK 171 Query: 211 IKIESSVTQH 220 K+E + ++ Sbjct: 172 -KLELRMNKN 180 >gi|15890450|ref|NP_356122.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15158680|gb|AAK88907.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 216 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 101/162 (62%), Gaps = 3/162 (1%) Query: 42 IAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLN 101 +A+ R+ S I M F +F+GTPLL+QLFV++YG+ G+ D+++A+ I+ TL+ Sbjct: 37 VALARVADSPAIQRASMAFIA-VFQGTPLLMQLFVVYYGVALAGLNVDAWIAVAIAFTLH 95 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF-ISIL 160 SA++ EI R I ++PKGQ +A+ A+GL ++ ++LPQ S +P + F + ++ Sbjct: 96 ASAFLGEIWRGGIQAVPKGQTEAANALGLHYVSRMKDVVLPQAFKIS-LPATIGFLVQLI 154 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 K TS+A+ + E+ + Q + + T++PL ++ + +Y ++ Sbjct: 155 KGTSLAAIVGFVELSRAGQIVSNQTFRPLTVFAIVGIIYFLI 196 >gi|320546923|ref|ZP_08041225.1| ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] gi|320448441|gb|EFW89182.1| ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] Length = 215 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 103/168 (61%), Gaps = 1/168 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+V+T+ +A + ++I+GFFI++I+ +++ I+S I Y+ + R TPLL+QL+ ++Y Sbjct: 5 ALVLTIRLALFGILGAIILGFFISLIK-YYNVAILSQICQIYIELSRNTPLLIQLYFLYY 63 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP +G+V S + I+ L +Y++E RS + ++ K Q++ +IGL+ Q + ++ Sbjct: 64 GLPKVGVVLPSELCAIVGLIFLGGSYMAESFRSGLEAVSKRQYEVGLSIGLSHLQNVFYV 123 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 ILPQ I + L + I ++K TS S + + ++ A+ ++ Y+ Sbjct: 124 ILPQAIAVALPSLVANIIFLVKETSFFSIVALADLMYIAKDLIGLYYE 171 >gi|319780744|ref|YP_004140220.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166632|gb|ADV10170.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 269 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 113/206 (54%), Gaps = 23/206 (11%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF-VIF 78 I VT+ + ++FV++ IG IA++ + S + I FYV I RG P+LV LF + F Sbjct: 45 GIGVTIFVTVVAFVLASAIGLGIALMGMSGSRWL-RQIARFYVEIIRGVPILVLLFWIAF 103 Query: 79 YGLPHIGIVFDSFVA---------------------IIISLTLNFSAYISEIIRSSIISI 117 G P +++ A I++LT+ +SA+ISE+ R+ I ++ Sbjct: 104 AGAPAFVAAWNALTAPLQSAGLFGELLVRDVSLLWRAIMALTIGYSAFISEVFRAGIQAV 163 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ +A+ A+GLTR Q R I+ PQ I T PL ++F++++K +S+ S + + +I Q Sbjct: 164 EKGQIEAAKALGLTRAQRFRLIVFPQAIRTILPPLGNDFVALVKDSSLVSVLGVADITQM 223 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 + + +++ Y A++YLILT Sbjct: 224 GKVYAAGSFRFFETYSITAYIYLILT 249 >gi|262044438|ref|ZP_06017499.1| amino acid ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330010549|ref|ZP_08306782.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|259038218|gb|EEW39428.1| amino acid ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328534486|gb|EGF61074.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 225 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 52/154 (33%), Positives = 92/154 (59%), Gaps = 3/154 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + ++ Y+ +F+GTPLL+QLF+ F+G+ G+ ++ A ++LTL SA++ +I S Sbjct: 56 VKRLIRGYIELFQGTPLLMQLFLAFFGVALFGVDVSAWTAASVALTLYTSAFLLDIWFGS 115 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++PKGQW+AS +GL+ QT+ ++ PQ + + P + ++K T++AS I E Sbjct: 116 IRALPKGQWEASRCLGLSFGQTLYRVVAPQALRIAIAPTVGFAVQVIKGTALASIIGFVE 175 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + + + + TYQP ++ +A Y IL CY Sbjct: 176 LTKAGTMLTNVTYQPFKVFALVALGYFIL---CY 206 >gi|255263812|ref|ZP_05343154.1| ABC-type amino acid transport system permease component [Thalassiobium sp. R2A62] gi|255106147|gb|EET48821.1| ABC-type amino acid transport system permease component [Thalassiobium sp. R2A62] Length = 248 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 115/200 (57%), Gaps = 10/200 (5%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF-YVW 63 W NL Q + T+ ++ + +IS+++G +A+ + SD I + YV Sbjct: 37 WSNL------QFMMTGAYNTILMSLTAILISVVVGLLVALPGL--SDKRGWRIFNRTYVE 88 Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + R P+LV + ++YGLP + G+ + F A +++L L+ SA+ +EI R+ I SI KGQ+ Sbjct: 89 VVRAVPILVLILWVYYGLPTLTGLTLNVFWAGVLALALSDSAFQAEIFRAGIQSIGKGQY 148 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ +I L + T+R+IILPQ I L ++ + +LK +S+ S I + E+ + A +V Sbjct: 149 EAAQSISLNYRDTMRYIILPQAIRRILPALGNQLVYMLKMSSLVSVIGMQELTRKANELV 208 Query: 183 STTYQPLIIYCELAFVYLIL 202 + Y+PL IY L YL+L Sbjct: 209 VSEYRPLEIYTILVLEYLVL 228 >gi|33151971|ref|NP_873324.1| arginine transporter permease subunit ArtM [Haemophilus ducreyi 35000HP] gi|33148193|gb|AAP95713.1| arginine transport system permease protein [Haemophilus ducreyi 35000HP] Length = 227 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/219 (29%), Positives = 118/219 (53%), Gaps = 14/219 (6%) Query: 21 IVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVI 77 I +P + + +L+ F +AV F + + ++++ Y+ +F GTPLL+Q F+I Sbjct: 9 IAQGIPTSLMLTAAALMTAFILAVFFTFLLAMGNQWLKMLINSYLMLFTGTPLLIQFFLI 68 Query: 78 FYGLPHIG---------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +YG + D++ +++L LN +AY +++ ++ ++PKG+W A A+ Sbjct: 69 YYGPGQFKWITESVVWQFLSDAWFCAVLALALNSAAYSTQLFYGALKAVPKGKWQACSAL 128 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+R T++ I++P + + S+E I + K TS+ASTIT+ +I A+++ Y Sbjct: 129 GLSRLDTLK-IMIPYALRRALPSYSNEIILVFKGTSLASTITLLDIMGYARQLYGIEYDA 187 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQ-HTYSVDK 226 L IY +YLI+T I K+E+ V T+S K Sbjct: 188 LAIYGIAGLIYLIITGIMTFILRKVETRVLAFETFSTAK 226 >gi|13475816|ref|NP_107386.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] gi|14026575|dbj|BAB53172.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] Length = 230 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/182 (35%), Positives = 112/182 (61%), Gaps = 13/182 (7%) Query: 35 SLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH-------I 84 S++IGFF+A++ + I+ + +V +FRGTPLLVQ+F+I+YGL I Sbjct: 28 SMVIGFFLALLLALAQQGNRRIVIWPIRAFVAVFRGTPLLVQIFLIYYGLGQFRPSLQAI 87 Query: 85 GIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 GI + + + I++L+LN +AY SEI+R +I ++P+G +A+ A G+++ T+R I+L Sbjct: 88 GIWWLFREPYWCAIVALSLNEAAYGSEILRGAIKAVPRGLTEAATASGMSKLLTLRLIVL 147 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 P + + ++E I ++K TS+AS IT+ EI AQ ++S TY+ + ++ +YL Sbjct: 148 PLALRNAIPNYTNEIILMVKGTSLASIITLMEITGIAQGLISQTYRAVEVFVAAGAIYLT 207 Query: 202 LT 203 L Sbjct: 208 LN 209 >gi|195973408|gb|ACG63351.1| allantoate transport membrane protein [Klebsiella oxytoca M5al] Length = 218 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 53/154 (34%), Positives = 92/154 (59%), Gaps = 3/154 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + ++ Y+ +F+GTPLL+QLF+ F+G+ GI ++ A ++LTL SA++ +I S Sbjct: 49 VKRLIRGYIELFQGTPLLMQLFLAFFGVALFGIDVSAWTAASLALTLYTSAFLLDIWFGS 108 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++PKGQW+AS +GL+ QT+ ++ PQ + + P + ++K T++AS I E Sbjct: 109 IRALPKGQWEASRCLGLSFGQTLYRVVAPQALRIAIAPTVGFAVQVIKGTALASIIGFVE 168 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + + + + TYQP ++ +A Y IL CY Sbjct: 169 LTKAGTMLTNVTYQPFKVFALVALGYFIL---CY 199 >gi|113866502|ref|YP_724991.1| ABC transporter permease [Ralstonia eutropha H16] gi|113525278|emb|CAJ91623.1| ABC-type transporter, permease component: PAAT family [Ralstonia eutropha H16] Length = 242 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 68/232 (29%), Positives = 120/232 (51%), Gaps = 18/232 (7%) Query: 1 MKYEWFNLII-------DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI 53 M Y W + +++ + + + VTL + S+VI+L+IG + V+R + Sbjct: 1 MNYNWHWAVFLEQAAQNETYLDWMISGLKVTLALGLSSWVIALVIGSVLGVLRTV-PNKW 59 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLP----------HIGIVFDSFVAIIISLTLNFS 103 ++ I YV IFR PLLVQLF+ ++ P + F+A ++ L + Sbjct: 60 LAGIAATYVEIFRNIPLLVQLFIWYFVAPELLPGGEAIKQMNPFAQQFLAAMLCLGTFTA 119 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 A + E +RS I S+ +GQ +A A+G T QT RH++LP PL+SEF++I K++ Sbjct: 120 ARVCEQVRSGINSLARGQKNAGLAMGFTLPQTYRHVLLPMAFRVIVPPLTSEFLNIFKNS 179 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +VASTI + E+ +++V T +P + + +Y ++ +I +E+ Sbjct: 180 AVASTIGLLELAAQGRQLVDYTARPYESFIAVTLMYALINVTVMLIMRWVEA 231 >gi|325841308|ref|ZP_08167409.1| putative arginine ABC transporter, permease protein ArtQ [Turicibacter sp. HGF1] gi|325489989|gb|EGC92336.1| putative arginine ABC transporter, permease protein ArtQ [Turicibacter sp. HGF1] Length = 220 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 112/196 (57%), Gaps = 2/196 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I+D + + + TL +A I+ +I G +A+I++ S I+ I Y+ I RGT Sbjct: 8 ILDQYWYVFSEGLGGTLSLAAITVFFGMIFGAVLAIIKLSKSK-IVQFISTAYIEIIRGT 66 Query: 69 PLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PLL+QL+ + LP ++ + I+I+L +N SAY++EIIR+ I ++ KGQ +A+ + Sbjct: 67 PLLLQLYFFWLFLPKYLPFEISDWTCIVIALVINSSAYVAEIIRAGIQAVDKGQMEAAKS 126 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ + II PQ + L +EFI ++K TS+AS I ++ + Q I S T++ Sbjct: 127 LGMSDVHMMTRIIFPQAVKNILPALGNEFIMMVKETSLASVFFINDLMTSYQMIKSATFK 186 Query: 188 PLIIYCELAFVYLILT 203 P+ A +Y I+T Sbjct: 187 PIAPLMITAVIYFIVT 202 >gi|37676943|ref|NP_937339.1| arginine transporter permease subunit ArtM [Vibrio vulnificus YJ016] gi|37201487|dbj|BAC97309.1| arginine ABC transporter, permease protein [Vibrio vulnificus YJ016] Length = 222 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/217 (29%), Positives = 114/217 (52%), Gaps = 25/217 (11%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTIISLIMHFYVWIFRGTP 69 L +V +L + +S ++ I+ + + I +FS ++I+L F GTP Sbjct: 9 LLEGLVTSLELTAVSLLVGCILSLLMTAMLILRTPLLHWFSRSVITL--------FTGTP 60 Query: 70 LLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIISIPKG 120 LLVQ+F+I+YG + DSFV +++L LN +AY +++ + + +IP G Sbjct: 61 LLVQIFLIYYGPGQFEAIRDSFVWQWLSQPWFCAMLALALNTAAYSTQLFKGAFNAIPSG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW A A+G+ + T++ ++LP + + S+E I + K TS+ASTITI ++ AQR Sbjct: 121 QWQACRALGMNKLVTLK-VLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYAQR 179 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 I + TY L ++ YL + + +I ++E Sbjct: 180 INAQTYDTLTVFGVAGAFYLTINAIMTLIFRQVEKKA 216 >gi|241666824|ref|YP_002984908.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862281|gb|ACS59946.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 234 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/224 (29%), Positives = 124/224 (55%), Gaps = 16/224 (7%) Query: 19 AAIVVTL----PIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLL 71 A+ +VTL P I F +S++ G +A++ ++ + ++S Y++IFRG+PLL Sbjct: 7 ASTLVTLLKAVPTTLILFSLSILTGGLLALVIVWMRTSGNPVLSSFAKGYIFIFRGSPLL 66 Query: 72 VQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +Q+F++FYGL G + SF V ++SL L + Y +EI R I ++ + Sbjct: 67 IQMFLVFYGLGQFGFIRYSFLWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRAVSPKEI 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ +IG++ +R I+ P + S+E + ++KST++AS +T+ E+ AQR++ Sbjct: 127 EAARSIGMSGFLLVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLI 186 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 S TY+ + ++ A +YL+L +E S+++H + + Sbjct: 187 SQTYRTMEVFLCAAIIYLVLNFIILQGMALLEYSLSRHRRAAPQ 230 >gi|315931225|gb|EFV10196.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni 327] Length = 259 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 115/197 (58%), Gaps = 5/197 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFR 66 +I ++ + + TL I+ S ++S+I+G V F +I+ L + FY+ + R Sbjct: 50 VIATYKEKFLQGFLNTLIISFFSLLLSIILG---GVFCAFSLSSIVFLRFLSTFYIELIR 106 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+ +++Y + + + + +VA +I L+ +AY++EI R+ I+SI Q +++ Sbjct: 107 GTPLLVQVLLMYYIIANNLGLDNRYVAGVIILSCFSAAYLAEIFRAGILSISISQLESAR 166 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+GL Q ++I PQ + PLS +F +++K +S+ S I + E+ Q+AQ I S T+ Sbjct: 167 ALGLKEMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQSAQEINSYTF 226 Query: 187 QPLIIYCELAFVYLILT 203 L Y LA YLILT Sbjct: 227 ATLEAYVILAITYLILT 243 >gi|225853390|ref|YP_002733623.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease [Brucella melitensis ATCC 23457] gi|265993715|ref|ZP_06106272.1| his/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella melitensis bv. 3 str. Ether] gi|265999280|ref|ZP_05465661.2| his/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella melitensis bv. 2 str. 63/9] gi|225641755|gb|ACO01669.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella melitensis ATCC 23457] gi|262764696|gb|EEZ10617.1| his/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella melitensis bv. 3 str. Ether] gi|263093031|gb|EEZ17181.1| his/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella melitensis bv. 2 str. 63/9] Length = 232 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 121/209 (57%), Gaps = 12/209 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMHFYVWIFRG 67 +FPQLL AI L I+ I+ +++LI G + ++R I + +I +++ F RG Sbjct: 23 GAFPQLL-PAIGTNLVISIIAMILALIGGTALTILRTLGIAPLNAVIGVVISF----IRG 77 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TP+LVQ+F+ +YGLP +G+ A I+++ N S +I+EI+R + + G +A+ A Sbjct: 78 TPILVQIFLFYYGLPALGLDLSPIQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIA 137 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ K +ILPQ PL +E + +K T++ S IT+ E+ +TAQ++ + +++ Sbjct: 138 LGIKGKVIWTKVILPQLYIRIMPPLVNELTTTVKGTALLSVITVVEVLRTAQQVANASFR 197 Query: 188 PL-IIYCE---LAFVYLILTSFCYIIQIK 212 PL + C L V L+L+ +++++ Sbjct: 198 PLETLLCAAIILFAVNLVLSQCGRVLEMR 226 >gi|152970316|ref|YP_001335425.1| amino acid ABC transporter membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238894800|ref|YP_002919534.1| putative amino acid ABC transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|150955165|gb|ABR77195.1| putative amino acid transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238547116|dbj|BAH63467.1| putative amino acid ABC transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 218 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 52/154 (33%), Positives = 92/154 (59%), Gaps = 3/154 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + ++ Y+ +F+GTPLL+QLF+ F+G+ G+ ++ A ++LTL SA++ +I S Sbjct: 49 VKRLIRGYIELFQGTPLLMQLFLAFFGVALFGVDVSAWTAASVALTLYTSAFLLDIWFGS 108 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++PKGQW+AS +GL+ QT+ ++ PQ + + P + ++K T++AS I E Sbjct: 109 IRALPKGQWEASRCLGLSFGQTLYRVVAPQALRIAIAPTVGFAVQVIKGTALASIIGFVE 168 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + + + + TYQP ++ +A Y IL CY Sbjct: 169 LTKAGTMLTNVTYQPFKVFALVALGYFIL---CY 199 >gi|323467038|gb|ADX70725.1| Glutamine ABC transporter, permease protein [Lactobacillus helveticus H10] Length = 217 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 117/205 (57%), Gaps = 9/205 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W ++ + L + VT+ ++ IS +S ++G + +IR + +S I+ F + Sbjct: 8 YSWVDI------RFLLQGLWVTIYVSLISIALSFVVGLILGLIR-YMKIKYVSAIVGFII 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP +GIV + A I +L + +A ++EI+RS I S+ GQ Sbjct: 61 DIIRNLPLLLIIFFTYFGLPQLGIVTNPTTASIAALVIFEAAMLAEIVRSGIGSVDPGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + G++ Q + H+++PQ + L S+F+S++K TS+A+ I +PE+ AQ I Sbjct: 121 EGARSNGMSYGQAMYHVVMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLILTSFC 206 S LI +Y +A +Y ++ FC Sbjct: 181 SQNTTYLIPMYVIIAIMYFVVC-FC 204 >gi|259502414|ref|ZP_05745316.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] gi|259169557|gb|EEW54052.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] Length = 497 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 52/153 (33%), Positives = 97/153 (63%), Gaps = 4/153 (2%) Query: 55 SLIMHF----YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEII 110 +L++H Y+ RGTP++VQ+ +++G+ I + +A II++++N AY++EII Sbjct: 325 NLVLHGLAVAYIEFIRGTPMMVQIMFVYFGIGAIIQSMPAVIAGIIAISINSGAYVAEII 384 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 RS I ++ GQ +AS ++G++++ T+R+++LPQ + L +EFI++LK +S+AS I Sbjct: 385 RSGIQAVSAGQVEASRSLGMSKRLTMRYVVLPQAVRNIWPALGNEFITLLKDSSLASVIG 444 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + E+ Q + S TY+ ++ +Y ILT Sbjct: 445 VTELMYQTQLVQSATYKGVLPLGVAMLIYFILT 477 >gi|258406609|ref|YP_003199351.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] gi|257798836|gb|ACV69773.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] Length = 335 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 119/205 (58%), Gaps = 16/205 (7%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 + P +L + +TL ++ ++ ++ +++G + RI S+ + Y+ I RG+PL Sbjct: 120 EGKPGILLQGLWITLKVSVVAIILGIVLGVLTGLSRIS-SNPALRWSAITYIEIIRGSPL 178 Query: 71 LVQLFVIFYGLPHIGIVFDSFVA------------IIISLTLNFSAYISEIIRSSIISIP 118 LVQ+F+ ++ IG + +S +A IISL + AY++EI+R+ I S+ Sbjct: 179 LVQIFLWYF---VIGTLVNSILAQNGLGQISPLWFGIISLAVFTGAYVAEIVRAGIQSVS 235 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+ ++G+T Q++R +ILPQ L+ +FIS++K +S+ I++ E+ + Sbjct: 236 RGQMEAARSLGMTYTQSMRKVILPQAFKRILPALAGQFISLIKDSSLLGVISVRELTKAT 295 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT 203 + +V+++ QP ++ A +YL+LT Sbjct: 296 REVVTSSLQPFELWITCAVLYLLLT 320 >gi|121608891|ref|YP_996698.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121553531|gb|ABM57680.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 243 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 113/205 (55%), Gaps = 10/205 (4%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +V+TL + IS I + +A+ R S+ ++S + Y +FRGTPLLVQLF+++Y Sbjct: 28 GLVLTLELLSISSAIGFALAVPLALARNS-SNWLLSRSVWLYTGLFRGTPLLVQLFMLYY 86 Query: 80 GLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 GL + +S+ I++ TLN +AYI+EI+ I + P G+ +A+ ++G+ Sbjct: 87 GLAQWPWIRESWAWPYLREAYGCAILAFTLNTAAYIAEILAGQIRNTPHGEVEAARSLGM 146 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 +R I+LP + + S+E I ++ +TSVAS +T+ ++ A++I + TY P Sbjct: 147 NHWLLLRRIVLPSALRRALPAYSNEVIMLMHATSVASLVTLADLTGIARQIYAETYNPFE 206 Query: 191 IYCELAFVYLILTSFCYIIQIKIES 215 + YL+LT+ I ++E Sbjct: 207 PFLIAGIFYLVLTNALAWIFRRMEK 231 >gi|317401750|gb|EFV82369.1| amino acid ABC transporter permease [Achromobacter xylosoxidans C54] Length = 218 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 92/157 (58%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ +F+GTPLL+QLF+ F+GL G+ ++A +LTL A+++EI R + +IPKG Sbjct: 56 YIELFQGTPLLMQLFLAFFGLSLAGVEVPPWLAAGAALTLWSGAFLAEIWRGCVEAIPKG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+AS ++ L Q +R+++LPQ + + P + I+KST++ S I E+ + + Sbjct: 116 QWEASASLALGYVQQMRYVVLPQALRIAVAPTVGFAVQIVKSTALTSIIGFTELSKASTV 175 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 I + T+ P +Y A +Y L + +++E + Sbjct: 176 ITNATFSPFTVYACAALIYFALCWPLSRLSLRLERKL 212 >gi|91786596|ref|YP_547548.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91695821|gb|ABE42650.1| amino acid ABC transporter membrane protein 1, PAAT family [Polaromonas sp. JS666] Length = 222 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 111/195 (56%), Gaps = 2/195 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ P L+ A + +L IA ++F ++IG A +R + I+ YV F T Sbjct: 8 VLERLPYLIGGAWL-SLQIAFLAFAFGMLIGLGGASVRAY-GPPWARRIVGAYVVFFTNT 65 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P LVQ+F IF+ LP GI+ + A++I + LN AY++EI R+ S+ + + +A+ + Sbjct: 66 PQLVQIFFIFFALPDAGILLSPYQAVLIGMVLNAGAYLTEIQRAGFESVRQLELEAAETL 125 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G +R QTIR++ILP PLS+++I + +S+A+ + E+ A I S T++ Sbjct: 126 GFSRIQTIRYVILPHIARVLFPPLSNQYILMTLGSSMAAVFGVEELTGRAYNINSETFRS 185 Query: 189 LIIYCELAFVYLILT 203 + ++ A +Y++LT Sbjct: 186 IEVFSVAAVLYIVLT 200 >gi|317153460|ref|YP_004121508.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] gi|316943711|gb|ADU62762.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] Length = 273 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 110/187 (58%), Gaps = 2/187 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VTL I +S + L IG A++R+ S + Y+ + R +PLL+Q+F Sbjct: 70 LLQGLGVTLRITALSMGLMLGIGLITALMRMS-SSLAARGVARGYMELIRNSPLLIQIFF 128 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 I++ + I + +F A II+L+L AY SEI+R+ I SI GQW+A+ ++G++ Sbjct: 129 IYFVIAPI-LDISAFWAAIIALSLFEGAYASEILRAGISSIASGQWEAAQSLGMSPYAMY 187 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 RHIILPQ + PL+S+ +S++K +++ STI I ++ Q + I + T+ I+ +A Sbjct: 188 RHIILPQAVRRVLPPLTSQAVSLVKDSALVSTIAIMDLTQQGRMIDAETFLTFEIWFTVA 247 Query: 197 FVYLILT 203 VYL +T Sbjct: 248 AVYLAVT 254 >gi|229591696|ref|YP_002873815.1| putative ABC transporter ATP-binding protein [Pseudomonas fluorescens SBW25] gi|229363562|emb|CAY50838.1| putative ABC transport system, ATP-binding protein [Pseudomonas fluorescens SBW25] Length = 505 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 132/234 (56%), Gaps = 17/234 (7%) Query: 1 MKYEW---FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI 57 M ++W F L+ D+ + A + ++ +++V+S+ +GF +A+ + ++S+ Sbjct: 1 MTFDWNYMFGLLADAE---FWRATWTVIKLSTLTWVLSIGLGFLLALAKQS-KHGLLSVP 56 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRS 112 Y+W+FR PLLV L + Y LP ++ D F + +++L + +AY++EI R Sbjct: 57 ARGYIWLFRSLPLLV-LLIFIYNLPQALPGTSAVLADPFWSGLLALVICETAYVAEIHRG 115 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 ++SIPKGQ +A+ A+GL T +++PQ + + L++E+ISI+K TS+ S I++ Sbjct: 116 GLLSIPKGQGEAARALGLKFFGTQWRVVIPQALRVALPSLANEYISIVKLTSLVSVISLT 175 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYL-ILTSFCYIIQIKIES--SVTQHTYS 223 EI QR+ S + + +AF Y+ I+T F ++++ ++E V Q S Sbjct: 176 EILMVGQRLYSQNFLVIETMAAVAFFYVFIVTVFDFLLK-RLERFLDVNQRNVS 228 >gi|259909373|ref|YP_002649729.1| Putative amino acid ABC transporter, permease protein [Erwinia pyrifoliae Ep1/96] gi|224964995|emb|CAX56523.1| Putative amino acid ABC transporter, permease protein [Erwinia pyrifoliae Ep1/96] gi|283479445|emb|CAY75361.1| putative ABC transport system, inner membrane component [Erwinia pyrifoliae DSM 12163] Length = 221 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 108/191 (56%), Gaps = 2/191 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 +P+L+ + + VT+ + ++ +++G A +R +++S I YV + R TP +V Sbjct: 14 WPELV-SGLWVTIQLTVMATTGGVVLGIVGAALR-SGKPSLLSRIWGVYVELIRNTPFVV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I +GLP++G+ + A ++++ +N AY +EIIR+ I PKGQW+A +G+TR Sbjct: 72 QLFFIVFGLPNLGLKLTAGEAALLAMLINLGAYSTEIIRAGIQVTPKGQWEAGRVLGMTR 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +QT ++LP + L S+ I ++ +SV S ++ E+ A I S T+ +Y Sbjct: 132 RQTFMRVVLPPALKRIYPALVSQCIIVMLGSSVVSQVSYEELTFAANLIQSRTFLSFEVY 191 Query: 193 CELAFVYLILT 203 +YL L+ Sbjct: 192 LVTTLMYLALS 202 >gi|209695420|ref|YP_002263349.1| arginine/ornithine periplasmic binding protein-dependent transporter, inner membrane component [Aliivibrio salmonicida LFI1238] gi|208009372|emb|CAQ79645.1| arginine/ornithine periplasmic binding protein-dependent transporter, inner membrane component [Aliivibrio salmonicida LFI1238] Length = 225 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 114/204 (55%), Gaps = 9/204 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++II+S P L + T+ + +S +I L I A+ R ++ +I + Y++ F Sbjct: 3 FSIIIESLPVYL-DGLWTTVWLVALSLIIGLCIAVPTAIARNS-NNPLIWVPAWAYIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD------SFVAIIISLTLNFSAYISEIIRSSIISIPK 119 RGTPLL+QL++I+YG+ V D SF A++ + LN AY SEI+R SI +P+ Sbjct: 61 RGTPLLIQLYLIYYGMDQFYPVKDTVWEHASFCALV-AFALNTGAYTSEIVRGSINGLPQ 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G+ +A+ A G+++ QT + IILP + + S+E I +L +++A +T+ ++ A+ Sbjct: 120 GEIEAAKAYGMSQFQTYKRIILPSALRRALPAYSNEVIFMLHGSAIAGIVTLMDLTGAAR 179 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 + S Y P Y Y+ LT Sbjct: 180 LVNSRYYAPFESYIAAGLFYMCLT 203 >gi|186473942|ref|YP_001861284.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184196274|gb|ACC74238.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 543 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 113/206 (54%), Gaps = 2/206 (0%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 P LL I T+ + + +++G +A +++ + +L + V IFRGTPL+ Sbjct: 9 GLPYLLRG-IGFTIAVTALGLAGGVVVGLVLAAMQLSRVGPLAALARGYTV-IFRGTPLI 66 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +QL + LPHIG+ + A ++L N +I+EI+R+ ++ + +GQ A A+G+T Sbjct: 67 LQLVFAYDALPHIGLKLSATGAAALALAANEGPFIAEILRAGVLGVERGQLLAGQALGMT 126 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 +R +I PQ I L +E +S LK++S+AS I + E+ + ++ S+T+ I Sbjct: 127 PSVLMRRVIAPQAIRAIVPALGNESVSALKNSSLASVIAVDELTLRSTQLASSTFDFFSI 186 Query: 192 YCELAFVYLILTSFCYIIQIKIESSV 217 + +YLILT +IQ+ E+++ Sbjct: 187 FFASGLMYLILTGAVAVIQLIAEAAL 212 >gi|291521639|emb|CBK79932.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Coprococcus catus GD/7] Length = 216 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 61/174 (35%), Positives = 114/174 (65%), Gaps = 5/174 (2%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L+ ++ +T+ I ++ + SLI+G +A+IR+ + I+S+I FY+ + RGTPL++QL Sbjct: 8 QQLFGSMGITMEIFFVTLITSLILGLGLALIRMS-KNPILSVIAKFYISVMRGTPLMLQL 66 Query: 75 FVIFYGLPHI-GIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 V+++G I G+ A++I LN++AY +EI RS I +IP GQ++A+ +G Sbjct: 67 LVVYFGPFFIFGMQITPSYRLKAVLIGFALNYAAYFAEIYRSGIAAIPVGQYEAARMLGY 126 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++ QT +I++PQ I P+++E I+++K TS+A T+ + E+F +++V++ Sbjct: 127 SKTQTFAYIVMPQVIKRIIPPVANETITLVKDTSLAFTLAVAEVFTVTKQLVAS 180 >gi|254690093|ref|ZP_05153347.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella abortus bv. 6 str. 870] gi|254694581|ref|ZP_05156409.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella abortus bv. 3 str. Tulya] gi|254696206|ref|ZP_05158034.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella abortus bv. 2 str. 86/8/59] gi|254731124|ref|ZP_05189702.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella abortus bv. 4 str. 292] gi|256112283|ref|ZP_05453204.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella melitensis bv. 3 str. Ether] gi|256258346|ref|ZP_05463882.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella abortus bv. 9 str. C68] gi|260755631|ref|ZP_05867979.1| polar amino acid ABC transporter [Brucella abortus bv. 6 str. 870] gi|260758856|ref|ZP_05871204.1| polar amino acid ABC transporter [Brucella abortus bv. 4 str. 292] gi|260760580|ref|ZP_05872923.1| polar amino acid ABC transporter [Brucella abortus bv. 2 str. 86/8/59] gi|260884656|ref|ZP_05896270.1| polar amino acid ABC transporter [Brucella abortus bv. 9 str. C68] gi|261214905|ref|ZP_05929186.1| polar amino acid ABC transporter [Brucella abortus bv. 3 str. Tulya] gi|297247189|ref|ZP_06930907.1| polar amino acid transport system permease [Brucella abortus bv. 5 str. B3196] gi|260669174|gb|EEX56114.1| polar amino acid ABC transporter [Brucella abortus bv. 4 str. 292] gi|260671012|gb|EEX57833.1| polar amino acid ABC transporter [Brucella abortus bv. 2 str. 86/8/59] gi|260675739|gb|EEX62560.1| polar amino acid ABC transporter [Brucella abortus bv. 6 str. 870] gi|260874184|gb|EEX81253.1| polar amino acid ABC transporter [Brucella abortus bv. 9 str. C68] gi|260916512|gb|EEX83373.1| polar amino acid ABC transporter [Brucella abortus bv. 3 str. Tulya] gi|297174358|gb|EFH33705.1| polar amino acid transport system permease [Brucella abortus bv. 5 str. B3196] gi|326409953|gb|ADZ67018.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease [Brucella melitensis M28] gi|326539669|gb|ADZ87884.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella melitensis M5-90] Length = 219 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 121/209 (57%), Gaps = 12/209 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMHFYVWIFRG 67 +FPQLL AI L I+ I+ +++LI G + ++R I + +I +++ F RG Sbjct: 10 GAFPQLL-PAIGTNLVISIIAMILALIGGTALTILRTLGIAPLNAVIGVVISF----IRG 64 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TP+LVQ+F+ +YGLP +G+ A I+++ N S +I+EI+R + + G +A+ A Sbjct: 65 TPILVQIFLFYYGLPALGLDLSPIQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIA 124 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ K +ILPQ PL +E + +K T++ S IT+ E+ +TAQ++ + +++ Sbjct: 125 LGIKGKVIWTKVILPQLYIRIMPPLVNELTTTVKGTALLSVITVVEVLRTAQQVANASFR 184 Query: 188 PL-IIYCE---LAFVYLILTSFCYIIQIK 212 PL + C L V L+L+ +++++ Sbjct: 185 PLETLLCAAIILFAVNLVLSQCGRVLEMR 213 >gi|149189500|ref|ZP_01867784.1| amino acid ABC transporter, permease [Vibrio shilonii AK1] gi|148836657|gb|EDL53610.1| amino acid ABC transporter, permease [Vibrio shilonii AK1] Length = 215 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 119/213 (55%), Gaps = 16/213 (7%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACI--SFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 Y + + I+ F AI ++ +A I SF I L++ F A I ++S + Sbjct: 2 YRYLDSFIEGF------AITASISVASIIGSFCIGLLVMF--ACIS---QSKVLSKTGYT 50 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ +FR P +VQ+F IFYGLP + I D + +++L++ AY ++++R+++ + + Sbjct: 51 YINVFRNIPFIVQVFFIFYGLPELRIFIDPYTTGVLALSIAVGAYCADVLRAAVQQVDRD 110 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ + GL R R IILP + S PL S F++++ +TS+ ST+T+ E+ TA+ Sbjct: 111 VIEAAQSFGLKRLTIYRKIILPIALRNSIKPLGSIFVNLILTTSILSTVTLNELTGTAKI 170 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKI 213 I + T++P +Y L Y +LT YI+ I I Sbjct: 171 IAAETFRPFEVYFFLLLFYCVLT---YILSILI 200 >gi|217963554|ref|YP_002349232.1| L-cystine transport system permease TcyL [Listeria monocytogenes HCC23] gi|290893635|ref|ZP_06556617.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071] gi|217332824|gb|ACK38618.1| L-cystine transport system permease protein TcyL [Listeria monocytogenes HCC23] gi|290556837|gb|EFD90369.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071] gi|307571870|emb|CAR85049.1| polar amino acid ABC transporter, permease protein [Listeria monocytogenes L99] Length = 238 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 69/227 (30%), Positives = 124/227 (54%), Gaps = 15/227 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +I D P L + +TL I +S + I+G +++ RI+ ++ + Y+ FR Sbjct: 8 KMIADFIPTLA-GYLPITLYILALSLIFGFILGVLLSLPRIY-KIPVLDQLARVYISFFR 65 Query: 67 GTPLLVQLFVIFYGLPH----IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 GTP++VQLF++FYG+P +GI D A I + L+ +A I+E+IR+ + S+ Sbjct: 66 GTPIMVQLFIVFYGIPALSSIVGIDLSQMDPLYAAIATYALSSAATIAEVIRAGVNSVDA 125 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+Y++GL +QT IILPQ + + + I LK TS+A +I + ++ Q Sbjct: 126 GQTEAAYSVGLNGRQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQ 185 Query: 180 RIVSTTYQPLIIYCELAFVY-----LILTSFCYIIQIKIESSVTQHT 221 +++ + L +Y L+ +Y L+ SF + I+ +++ T+ T Sbjct: 186 TLITLSNHALEVYISLSIIYYLTAVLLEYSFKW-IEKRVKKENTRFT 231 >gi|71735563|ref|YP_274485.1| amino acid ABC transporter protein, permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556116|gb|AAZ35327.1| amino acid ABC transporter protein, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 216 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 59/152 (38%), Positives = 90/152 (59%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 TI+ + Y+ FR TPL+VQL+V+F+ LP GI F + +I L ++AYI+E R Sbjct: 49 TIVHRLSKGYLSFFRNTPLVVQLYVLFFALPLAGITFPAITTGVIGLGCYYAAYIAEAYR 108 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 +I IP GQW+A+ A+ +R T R IILPQ + L + I + K T + + ITI Sbjct: 109 GAIDDIPAGQWEAARALDFSRGDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVITI 168 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PE+FQ A++I TY+ Y +A ++L ++ Sbjct: 169 PELFQAAKQIAGMTYRYNEPYTVMALMFLAIS 200 >gi|296162373|ref|ZP_06845166.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Burkholderia sp. Ch1-1] gi|295887406|gb|EFG67231.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Burkholderia sp. Ch1-1] Length = 220 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 61/180 (33%), Positives = 99/180 (55%), Gaps = 18/180 (10%) Query: 29 CISFVISLIIGFFIAVIRI-------FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 C +I+ ++G + ++R+ F ++ +S + RGTPLLVQL+V+FY L Sbjct: 30 CFGAIIAFVVGLALTMLRMTRFAWLTFSANAFVSFV--------RGTPLLVQLYVLFYVL 81 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 P G+ +FV +I L + +SA SEI R+ I I GQW+A+ +GL ++ I+L Sbjct: 82 PKWGMSASAFVTGVIGLGVYYSASCSEIYRAGIEGIAPGQWEAALTLGLPIRRVWSGIVL 141 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY---QPLIIYCELAFV 198 PQ + T L ++ +++ K TS+ STIT+ E+ A + S Y +PL + L FV Sbjct: 142 PQALRTVLPMLGNQVVAMFKETSLMSTITVMELLAQATNVGSIQYRYVEPLTLAGLLYFV 201 >gi|167579226|ref|ZP_02372100.1| glutamine ABC transporter permease protein [Burkholderia thailandensis TXDOH] Length = 218 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 54/175 (30%), Positives = 100/175 (57%), Gaps = 6/175 (3%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG-IVFD 89 F++ +I G F A + ++++ Y+ + RGTP++VQ+ +++ LP + I D Sbjct: 33 GFLVGMIAGMFRA-----YGPAALNVLTQVYIELIRGTPIVVQVMFLYFALPMLAHIRID 87 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 A I+++TLN AY++E++R +++SIPKG +A A+GL+ + + I+ P Sbjct: 88 GLTAAIVAITLNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLVKIVGPLAFRRLI 147 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 PL ++ I LK TS+ I + E+ + Q I++ +Q + I+ +A +YL LT Sbjct: 148 PPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAAIYLALTG 202 >gi|52424277|ref|YP_087414.1| arginine transporter permease subunit ArtM [Mannheimia succiniciproducens MBEL55E] gi|52306329|gb|AAU36829.1| ArtM protein [Mannheimia succiniciproducens MBEL55E] Length = 227 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 67/227 (29%), Positives = 124/227 (54%), Gaps = 21/227 (9%) Query: 1 MKYEWFNLIIDSFP-QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M E+F I P LL A+ + ++FV++L + F +++ + + +++ Sbjct: 1 MFREYFMEIARGIPTSLLLTAVAL-----AVAFVLALFLTFLLSM-----ENKPVKRVIN 50 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEII 110 ++ +F GTPLLVQ F+I+ G + +S + + +L LN +AY +++ Sbjct: 51 IFLTLFTGTPLLVQFFLIYSGPGQFQWIVNSALWPLLSNAWFCAMFALALNSAAYSTQLF 110 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 ++ +IPKGQW++ A+GL+R QT++ I++P + + S+E I + K TS+ASTIT Sbjct: 111 HGAVKAIPKGQWESCAALGLSRLQTLK-ILIPYALKRALPSYSNEIILVFKGTSLASTIT 169 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 I +I A+++ T Y + IY +YL++T ++ K+E V Sbjct: 170 IMDIMGYARQLYGTEYDAITIYGIAGVIYLVITGLMTLLLRKLEHKV 216 >gi|134290995|ref|YP_001114764.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia vietnamiensis G4] gi|134134184|gb|ABO58509.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia vietnamiensis G4] Length = 248 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 118/207 (57%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ + D+ QLL AA+ TL + S V+ ++ I +R+ + + Y+ +F Sbjct: 5 FDFLADTLRQLL-AAVPTTLGLFFASLVLGGLLSLVIVAMRVS-PHWLPNRFARAYILVF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RG+PLL+Q+F+++YGL G++ +SFV ++SL L + Y +EI+R +++ Sbjct: 63 RGSPLLIQMFLVYYGLGQFGVIRESFVWPLLRDPYACAVLSLALCTAGYTAEIVRGGLMA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P GQ +A Y+IGL+ +R +I P + S+E + ++KST++AS +T+ E+ Sbjct: 123 VPVGQIEAGYSIGLSGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 AQ+I+ TY+ ++ A +YL L Sbjct: 183 VAQQIIQQTYRTTEVFVCAALIYLGLN 209 >gi|297517480|ref|ZP_06935866.1| glutamine ABC transporter permease protein [Escherichia coli OP50] Length = 195 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 113/198 (57%), Gaps = 5/198 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I + P L+ A +TL I+ + L+IG R F I + + Sbjct: 1 MQFDW-SAIWPAIPLLIEGA-KMTLWISVLGLAGGLVIGLLAGFARTF-GGWIANHVALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R +TIR++ILP + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELA 196 Q I++ ++ L I+ +A Sbjct: 178 QEIIAGNFRALEIWSAVA 195 >gi|293381613|ref|ZP_06627597.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] gi|290921797|gb|EFD98815.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] Length = 217 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 116/205 (56%), Gaps = 9/205 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W ++ + L + VT+ ++ IS +S ++G + ++R + +S I+ F + Sbjct: 8 YSWVDI------RFLLQGLWVTIYVSLISIALSFVVGLILGLVR-YMKIKYVSAIVGFII 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP +GIV + A I +L + A ++EI+RS I S+ GQ Sbjct: 61 DIIRNLPLLLIIFFTYFGLPQLGIVTNPTTASIAALVIFEGAMLAEIVRSGIGSVDSGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + G++ Q + H+I+PQ + L S+F+S++K TS+A+ I +PE+ AQ I Sbjct: 121 EGARSNGMSYVQAMYHVIMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLILTSFC 206 S LI +Y +A +Y I+ FC Sbjct: 181 SQNTTYLIPMYVIIAIMYFIVC-FC 204 >gi|261210505|ref|ZP_05924798.1| amino acid ABC transporter permease protein [Vibrio sp. RC341] gi|260840290|gb|EEX66861.1| amino acid ABC transporter permease protein [Vibrio sp. RC341] Length = 225 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 114/203 (56%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LII+S P L + + T+ + +S VI L+ +A+ R +S Y++ Sbjct: 3 FSLIIESLPVYL-SGLWTTVWLVSLSLVIGLMWAIPLAIARNS-KQQWLSYPAWGYIYFL 60 Query: 66 RGTPLLVQLFVIFYGL----PHIGIVFD-SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ P G +++ ++ +++ LN SAY +EI+R ++ +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQFFPVKGTLWEHAWFCALVAFILNTSAYTAEIVRGAMNGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G++ QT + IILP + + S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMSSWQTYKRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFEAFLSAGLFYMSLT 203 >gi|52144758|ref|YP_082070.1| amino acid ABC transporter, permease [Bacillus cereus E33L] gi|51978227|gb|AAU19777.1| amino acid ABC transporter, permease [Bacillus cereus E33L] Length = 217 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 79/219 (36%), Positives = 122/219 (55%), Gaps = 9/219 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M NL+I+S PQLL + TL IA + +IS I G ++R TI+ I Sbjct: 1 MGNSGINLLIESLPQLL-KGLEQTLLIALFTIIISTIGGILFGIVRTS-KITILRFISRT 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ +FR P+LV LF+ F+GLP +GI S VA I +L+L I EI+R ++ S+PK Sbjct: 59 YIELFRSIPILVWLFLFFFGLPIALGIDVSSTVAAITALSLWGITEIGEIVRGALQSLPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A +IGL + Q +++++PQ I + FI I+++TS+ I + E+ + Q Sbjct: 119 GQVEAGKSIGLNKNQLYQYVLIPQAIRRMIPATINIFIRIIQTTSLTVLIGVTEVIKAGQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQI---KIES 215 +IV T + +IY L Y +L CY + I K+E+ Sbjct: 179 QIVERTGEAFLIYGCLFIFYFLL---CYPLSIWSRKLET 214 >gi|224372627|ref|YP_002606999.1| permease of abc transporter [Nautilia profundicola AmH] gi|223589720|gb|ACM93456.1| permease of abc transporter [Nautilia profundicola AmH] Length = 318 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 58/160 (36%), Positives = 100/160 (62%), Gaps = 5/160 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV + RGTPLLVQLF+ ++ + +F+ F A ++SL++ + AYI+EI+R +I +I Sbjct: 157 YVTVIRGTPLLVQLFIFYF---IVATIFNLPRFWAGVMSLSIFYGAYIAEILRGAIQAID 213 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A+ ++G T Q ++ IILPQ + + L E IS++K +S+ S I+I ++ + Sbjct: 214 KGQHEAAMSLGFTSFQKMQLIILPQALRKALPALVGELISLIKDSSLVSIISITDLTKVG 273 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 + IV+ T+ P + +A +YL+LTS I ++E + Sbjct: 274 REIVANTFSPFETWLTVAALYLMLTSILSFIGHRLEKKMK 313 >gi|157415203|ref|YP_001482459.1| amino acid ABC transporter permease [Campylobacter jejuni subsp. jejuni 81116] gi|157386167|gb|ABV52482.1| putative glutamine transport system permease [Campylobacter jejuni subsp. jejuni 81116] gi|307747845|gb|ADN91115.1| Putative glutamine transport system permease [Campylobacter jejuni subsp. jejuni M1] Length = 261 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 115/197 (58%), Gaps = 5/197 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFR 66 +I ++ + + TL I+ S ++S+I+G V F +I+ L + FY+ + R Sbjct: 52 VIATYKEKFLQGFLNTLIISFFSLLLSIILG---GVFCAFSLSSIVFLRFLSTFYIELIR 108 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTPLLVQ+ +++Y + + + + +VA +I L+ +AY++EI R+ I+SI Q +++ Sbjct: 109 GTPLLVQVLLMYYIIANNLGLDNRYVAGVIILSCFSAAYLAEIFRAGILSISISQLESAR 168 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+GL Q ++I PQ + PLS +F +++K +S+ S I + E+ Q+AQ I S T+ Sbjct: 169 ALGLKEMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQSAQEINSYTF 228 Query: 187 QPLIIYCELAFVYLILT 203 L Y LA YLILT Sbjct: 229 ATLEAYVILAITYLILT 245 >gi|39997744|ref|NP_953695.1| amino acid ABC transporter permease [Geobacter sulfurreducens PCA] gi|39984636|gb|AAR36022.1| amino acid ABC transporter, permease protein, putative [Geobacter sulfurreducens PCA] gi|298506680|gb|ADI85403.1| amino acid ABC transporter, membrane protein, putative [Geobacter sulfurreducens KN400] Length = 262 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 60/156 (38%), Positives = 90/156 (57%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV RGTPLLVQ+ V FY + V D ++ +I+L+L AYISE+IR+ I S+ Sbjct: 102 YVETIRGTPLLVQILVFFYVVADAFGVGDRYLVGVITLSLFAGAYISEMIRAGIESVGDS 161 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ AIGLTR Q R+++ PQ + PL+ +F SI+K +S+ S I + E AQ Sbjct: 162 QMESARAIGLTRAQIYRYVVFPQAFRQTLPPLAGQFASIVKDSSLLSIIAVSEFTLNAQE 221 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 + + TY L Y LA YL +T ++ ++E Sbjct: 222 VNAFTYSTLESYLPLAIGYLAITLPISLLSRRLEKK 257 >gi|322831659|ref|YP_004211686.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321166860|gb|ADW72559.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 221 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 66/191 (34%), Positives = 103/191 (53%), Gaps = 2/191 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P+LL A + T+ + ++ V + IG A IR T+ + + YV R TP +V Sbjct: 14 MPELL-AGLWTTIELTVMATVGGVAIGICGAAIRCGNHKTLRA-VWGVYVEAIRNTPFVV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I +GLP IG+ + A ++++ +N AY +EIIR+ I PKGQW+A +GLTR Sbjct: 72 QLFFIVFGLPAIGLKMTAGEAALLAMLINLGAYSTEIIRAGIQVTPKGQWEAGRVLGLTR 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT I+LP ++ L S+ I ++ +SV S ++ E+ A I S T+ +Y Sbjct: 132 SQTFLRIVLPPSLKRIYPSLVSQCIIVMLGSSVVSQVSYEELTFAANLIQSRTFLSFEVY 191 Query: 193 CELAFVYLILT 203 YL+L+ Sbjct: 192 LVTTLFYLLLS 202 >gi|16519953|ref|NP_444073.1| probable amino-acid ABC transporter permease y4tG [Sinorhizobium fredii NGR234] gi|2501400|sp|P55661|Y4TG_RHISN RecName: Full=Probable amino-acid ABC transporter permease protein y4tG gi|2182637|gb|AAB91860.1| probable amino-acid ABC transporter permease y4tG [Sinorhizobium fredii NGR234] Length = 231 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 62/191 (32%), Positives = 106/191 (55%), Gaps = 7/191 (3%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII---SLIMHFYVWIFRGTPLLV 72 +L ++ TL A + F ++ ++G AV+R + + ++++ F R TPL+ Sbjct: 23 MLLMGLITTLQAAFLGFFVACVLGMVFAVLRGMRTRWVAWPAAVLIEF----IRDTPLIA 78 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF ++Y LP GI+F +F+ ++L + +SAYISE+ R I ++ GQ +A+ ++ L Sbjct: 79 QLFFLYYVLPEYGIIFPAFLTGALALGIQYSAYISEVYRGGIQAVDHGQREAAKSLDLPP 138 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +T H+ILPQ I L + +SI+K V S +TI E+ A+ I T+ L+ Sbjct: 139 ARTFTHVILPQAIPRVIPALGNYLVSIMKDVPVLSVVTIVEMLNAAKIIGDQTFNYLVPL 198 Query: 193 CELAFVYLILT 203 + +YLILT Sbjct: 199 SMVGGIYLILT 209 >gi|311103256|ref|YP_003976109.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 3 [Achromobacter xylosoxidans A8] gi|310757945|gb|ADP13394.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 3 [Achromobacter xylosoxidans A8] Length = 257 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 21/238 (8%) Query: 1 MKYEW-FNLIIDSFP-------QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT 52 M Y W +++ +D P Q ++ + TL +A ++V SL++G + V+R S Sbjct: 10 MNYNWSWSVFLDMSPDGVHTFLQTIFIGVGWTLALALTAWVFSLLLGSVLGVMRTA-SSR 68 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIV-------FDSFVAIIISLTL 100 +++ + YV +FR PLLVQ+F+ ++ LP + G+ + FV ++ L Sbjct: 69 LMNALGATYVEVFRNIPLLVQMFLWYFVLPELLPHAWGLAMKQMPQPWGQFVPAVLCLGF 128 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 SA ++E +R+ I S+P+GQ+ A A+GLT Q R++ILP+ PL+SEF+ + Sbjct: 129 YGSARVAEQLRAGIQSLPRGQFQAGTALGLTEAQVYRYVILPEAFRIVLPPLTSEFMGTI 188 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 K +SVA TI + E+ A+ + ++ + +YLI+ + +E V Sbjct: 189 KYSSVALTIGLLELTGQARSMAEFSFHIFEAFSAATVIYLIINGIVVLGMRMLERHVA 246 >gi|310639893|ref|YP_003944651.1| glutamine abc transporter permease protein [Paenibacillus polymyxa SC2] gi|309244843|gb|ADO54410.1| Glutamine ABC transporter permease protein [Paenibacillus polymyxa SC2] Length = 219 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 63/180 (35%), Positives = 107/180 (59%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + I+ + S I+G IA+ RI ++ I YV + R PLL+ + + GLP Sbjct: 23 TVQASVIALIGSFILGAIIAIFRIA-PFKWLNWIGTVYVEVIRNIPLLIVVLFFYLGLPT 81 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +GI D FV+ + LT+ +++I+E IR+ I S+PKGQ++AS + GL QT+ IILPQ Sbjct: 82 LGIPLDGFVSGTLGLTVYTASFIAEAIRAGIQSVPKGQFEASRSSGLNYNQTMISIILPQ 141 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I + ++FI+++K++SV + + ++ + I S T+ P+ +Y A +YL+LT Sbjct: 142 AIKIVLPAIGNQFINLVKNSSVLAIVAGLDLMYYSDLINSDTFLPITVYAITALLYLVLT 201 >gi|308175098|ref|YP_003921803.1| L-cystine transport system permease TcyM [Bacillus amyloliquefaciens DSM 7] gi|307607962|emb|CBI44333.1| L-cystine transport system permease protein TcyM [Bacillus amyloliquefaciens DSM 7] Length = 235 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 71/214 (33%), Positives = 113/214 (52%), Gaps = 18/214 (8%) Query: 24 TLPIACISFVISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 T+P+ VI +I GFFIA+ +RIF +++ FYV FR TP ++ + +I+ Sbjct: 18 TVPLTLAMTVIPIIAGFFIALGNITVRIFRIKWLLAF-SAFYVSFFRSTPAILHIMLIYL 76 Query: 80 GLP----------HIGIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G+P H+G + V +I++L+L AY++EI+RS I+++ GQ +A+Y Sbjct: 77 GVPLIADHFSRTFHLGWSANQIPVAVFVIMALSLTAGAYMTEILRSGIMAVDTGQAEAAY 136 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +IGLTR Q IR +ILPQ S ++ I L +TS+A+ + +PEI TA S Y Sbjct: 137 SIGLTRGQMIRRVILPQAFMISLPNFTNIGIGFLHTTSIAAIVAVPEITGTATIAASDNY 196 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 L + A +Y LT + E ++ Sbjct: 197 AFLEAFIGAAVIYWGLTLILEAVNTLAEKRAARY 230 >gi|88856491|ref|ZP_01131149.1| putative ABC transporter permease [marine actinobacterium PHSC20C1] gi|88814358|gb|EAR24222.1| putative ABC transporter permease [marine actinobacterium PHSC20C1] Length = 340 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 71/237 (29%), Positives = 124/237 (52%), Gaps = 20/237 (8%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W N F + + A TL + S +I++I+G +AV+R+ + ++ I Y+ Sbjct: 60 YGWENFGKFIFDKRISQAAGYTLLLTVYSMIIAIILGVTLAVMRLS-DNPVVKGIAWLYL 118 Query: 63 WIFRGTPLLVQL-----FVIFYGLPHIGIVF-------------DSFVAIIISLTLNFSA 104 W+FRGTP+ VQL F Y IG+ F + F +I L LN SA Sbjct: 119 WVFRGTPVYVQLVFWGLFATIYSTIDIGVPFTEPWLSVETNDLINVFWLAVIGLALNESA 178 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 Y++EI+R+ I+S+ KGQ +A+ A+G++ QT+ +++PQ + P +E IS+LK+TS Sbjct: 179 YMAEIVRAGILSVDKGQDEAATALGMSWLQTMTRVVIPQAMRIIIPPTGNEVISMLKTTS 238 Query: 165 VASTITIP-EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + + I E++ ++ I + P+ + + YL+ TS + Q +E ++ Sbjct: 239 LVTAIPFSLELYGRSRDISVVIFDPIPLLLVASAWYLLFTSILMVGQYFLEKRFSRG 295 >gi|251790087|ref|YP_003004808.1| glutamine ABC transporter permease protein [Dickeya zeae Ech1591] gi|247538708|gb|ACT07329.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 219 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 51/145 (35%), Positives = 92/145 (63%), Gaps = 2/145 (1%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ I RGTP++VQ+ I++ LP + + D F A ++++ +N AYI+EI R S++SI Sbjct: 58 FIEIIRGTPIVVQVMFIYFALPMLLTSVRIDPFSAAVVTIMINSGAYIAEITRGSVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+R+ T+RH+I P + PL +++I +K TS+ I + E+ + Sbjct: 118 KGFTEAGLALGLSRRDTLRHVIAPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT 203 Q I++ ++ L I+ +A +YL++T Sbjct: 178 QEIIAGNFRALEIWSAVAVIYLVIT 202 >gi|170740014|ref|YP_001768669.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168194288|gb|ACA16235.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 223 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 117/217 (53%), Gaps = 3/217 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M YE+ F + S+P+L + A+ TL ++ ++ VI + + A+ R +S ++ Sbjct: 1 MSYEFEFGEVFASWPELAWGALH-TLVLSGLAMVIGMAVAVLGALGRTS-GPAWLSGLIG 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TP L+Q+FVIF+GLP +G+ D A +++L +N AY EIIR+ I SI Sbjct: 59 AYIEVIRNTPFLIQIFVIFFGLPSLGLRLDPDSAALLALVVNVGAYGIEIIRAGIESIDH 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A +GL Q R+++L I L+S+FI ++ ++SV S I E+ A Sbjct: 119 GQIEAGRTLGLRPLQIFRYVVLKPAIQAIYPSLTSQFILLMLNSSVCSAIAASELTAAAG 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 I S ++ +Y + +Y L+ + + IE + Sbjct: 179 DIQSRNFRSFEVYLVVTGIYFALSVVLWGLFAGIERA 215 >gi|227112141|ref|ZP_03825797.1| octopine transport system permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227326810|ref|ZP_03830834.1| octopine transport system permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 244 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 114/212 (53%), Gaps = 12/212 (5%) Query: 21 IVVTLPIACISFVISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 I+ +P+ V S+ +GFF+A+ + S ++ I YV FRGTPLLVQLF+I Sbjct: 13 IIPGIPLTLQLAVSSVFLGFFLALGLALMQLSSFAVLRSIARTYVLFFRGTPLLVQLFLI 72 Query: 78 FYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +YGL V +S + ++SL+L AY SEIIR + S+P GQ +++ A Sbjct: 73 YYGLGQFTWVRESMLWPFLREPHWCALLSLSLCTGAYASEIIRGGLQSVPVGQIESARAC 132 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+ + I+ P I + +E IS++KSTS+AS IT+ EI A R+++ TY+ Sbjct: 133 GMPSFMIFKRIVFPLAIRQALPAYGNELISMVKSTSLASIITLMEITGIAARLIAETYRA 192 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 L ++ +YL + + + E ++T H Sbjct: 193 LEVFLVAGAIYLFINLILTRLLMWTEFTLTPH 224 >gi|172064905|ref|YP_001815617.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171997147|gb|ACB68064.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 248 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 99/169 (58%), Gaps = 9/169 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIR 111 Y+ +FRG+PLL+Q+F+++YGL G++ +SFV ++SL L + Y +EI+R Sbjct: 58 YILVFRGSPLLIQMFLVYYGLGQFGVIRESFVWPLLREPYVCAVLSLALCTAGYTAEILR 117 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++++P GQ +A Y+IGL+ +R +I P + S+E + ++KST++AS +T+ Sbjct: 118 GGLMAVPVGQIEAGYSIGLSGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTV 177 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E+ AQ+I+ TY+ ++ A +YL L + +E ++ H Sbjct: 178 WEVTGVAQQIIQQTYRTTEVFVCAALIYLGLNFIVVRLLGALEWRLSGH 226 >gi|22537108|ref|NP_687959.1| amino acid ABC transporter permease [Streptococcus agalactiae 2603V/R] gi|25010989|ref|NP_735384.1| hypothetical protein gbs0935 [Streptococcus agalactiae NEM316] gi|76787817|ref|YP_329663.1| polar amino acid ABC transporter permease [Streptococcus agalactiae A909] gi|76798873|ref|ZP_00781081.1| amino acid ABC transporter, permease protein SP1502 [Streptococcus agalactiae 18RS21] gi|77409385|ref|ZP_00786084.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] gi|77411031|ref|ZP_00787386.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] gi|77413253|ref|ZP_00789450.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] gi|22533969|gb|AAM99831.1|AE014235_4 amino acid ABC transporter, permease protein [Streptococcus agalactiae 2603V/R] gi|23095389|emb|CAD46594.1| unknown [Streptococcus agalactiae NEM316] gi|76562874|gb|ABA45458.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus agalactiae A909] gi|76585769|gb|EAO62319.1| amino acid ABC transporter, permease protein SP1502 [Streptococcus agalactiae 18RS21] gi|77160713|gb|EAO71827.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] gi|77162955|gb|EAO73911.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] gi|77171994|gb|EAO75164.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] Length = 213 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 102/167 (61%), Gaps = 4/167 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRG 67 I++ P LL A VTL + I +S+ +G +A ++++ F + ++ Y+WI RG Sbjct: 4 ILEILPSLLVGA-QVTLQVFFIVICLSIPLGIVVAFLMKVHFKP--LQWLLTTYIWIMRG 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL +Y LP +GI FD A II+ T+N++AY +EI R I SIPKGQ++A+ Sbjct: 61 TPLLLQLIFFYYFLPSVGISFDRMPAAIIAFTMNYAAYFAEIFRGGIESIPKGQYEAAKV 120 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 + ++ QT+ +I+LPQ + +E I+++K +S+ + + ++ Sbjct: 121 LKFSKFQTVWYIVLPQVFKIVLPSVFNETITLVKDSSLVYILGVGDL 167 >gi|329121396|ref|ZP_08250021.1| ABC superfamily ATP binding cassette transporter, membrane protein [Dialister micraerophilus DSM 19965] gi|327469686|gb|EGF15153.1| ABC superfamily ATP binding cassette transporter, membrane protein [Dialister micraerophilus DSM 19965] Length = 218 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 62/185 (33%), Positives = 103/185 (55%), Gaps = 9/185 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 +++ +L +D A + TL IA V+SL+ G FI+VIR + IIS I FY+ Sbjct: 7 FKYLHLFVD--------AGLTTLRIAFFGIVLSLLFGLFISVIR-YKKVPIISQICKFYI 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + R TPLLVQLF +++GLP GI + L ++Y++E RS + S+ K Q Sbjct: 58 ELSRNTPLLVQLFFLYFGLPKAGIHISGENCALSGLVFLGASYMAETFRSGLESVAKSQI 117 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +++ A+G+ Q R +I+PQ ++ S + + I ++K TSV S IP++ A+ ++ Sbjct: 118 ESAAALGMGEYQIFRFVIIPQAVSVSIPSVCANIIFLIKETSVFSVCAIPDLMYVAKDLI 177 Query: 183 STTYQ 187 Y+ Sbjct: 178 GLYYK 182 >gi|227495201|ref|ZP_03925517.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Actinomyces coleocanis DSM 15436] gi|226831653|gb|EEH64036.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Actinomyces coleocanis DSM 15436] Length = 314 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 111/205 (54%), Gaps = 24/205 (11%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-----PHI- 84 S VI I+ +A++R + I+ + F++W FRGTP+ QL IF+ L P + Sbjct: 69 SMVIGTILAVTMAIMRQS-PNPILRGVSWFFIWFFRGTPIYTQL--IFWSLLPVLYPQLS 125 Query: 85 -GIVFDS-------------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 GI F + ++ L LN AY++EIIR+ + S+ KGQW+A+ A+G+ Sbjct: 126 LGIPFGPEFVQFETKTYFTPMLMALVGLGLNEGAYLAEIIRAGLNSVDKGQWEAATALGM 185 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP-EIFQTAQRIVSTTYQPL 189 R +R IILPQT+ PL +E IS+LK+TS+ S I I E+ A+ + P+ Sbjct: 186 NRSIILRRIILPQTMRVIIPPLGNETISMLKTTSLVSAIPITLELTWAAKDKGQFLFAPV 245 Query: 190 IIYCELAFVYLILTSFCYIIQIKIE 214 + + A YL++TS + Q+ +E Sbjct: 246 PLLIDAAIWYLVITSILMVGQMYLE 270 >gi|229009851|ref|ZP_04167071.1| Amino acid ABC transproter, permease [Bacillus mycoides DSM 2048] gi|228751469|gb|EEM01275.1| Amino acid ABC transproter, permease [Bacillus mycoides DSM 2048] Length = 230 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 73/221 (33%), Positives = 121/221 (54%), Gaps = 4/221 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + I ++P LL A IV + SLI +A RI ++ +++ I H Y+ I Sbjct: 2 FEIFISTYPTLLKATIVTLQLTLTSLLLGSLIG-LLVAFFRIS-NNKVLNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ I IVF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSI-IVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGN 178 Query: 186 YQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQHTYSVD 225 +Q L Y + YL L F Y++ + + + SV Sbjct: 179 FQQLDTYIIVGVYYLALVLLFTYLVSLLEKRLQRKENNSVQ 219 >gi|298252593|ref|ZP_06976387.1| ABC-type amino acid transporter, permease component [Gardnerella vaginalis 5-1] gi|297532957|gb|EFH71841.1| ABC-type amino acid transporter, permease component [Gardnerella vaginalis 5-1] Length = 337 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 128/248 (51%), Gaps = 29/248 (11%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++EW + I + + I TL + I+ VIS++ +A++R + ++ + F+ Sbjct: 56 RFEWQVVGIYLISDNVLSGIGWTLLLTLIAMVISIVFAVGLAMMRKSV-NPVLRGVSWFF 114 Query: 62 VWIFRGTPLLVQLFVIFYGL-----PHIGI----------------VFDSFVAIIISLTL 100 +W FRGTP+ QL +F+G+ P I I + S A ++ L+L Sbjct: 115 IWFFRGTPVYTQL--VFWGMFAVLVPRISIGIPFTSVEFWSIDSNVIMTSLTAAVVGLSL 172 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N SAY+SEI+R+ + ++ GQ +A+ A+G+ R T+R +ILPQ + PL +E I +L Sbjct: 173 NESAYLSEIVRAGLEAVDSGQVEAAKALGMGRALTMRRVILPQAMRIIVPPLGNETIGML 232 Query: 161 KSTSVASTITIP---EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 K+TS+ + +P E+ I + Y+P+ + + YLI+TS ++Q +E Sbjct: 233 KTTSL--VLAVPFTLELQFATNAIANRIYKPIPLLLVASIWYLIITSILMVLQYMLEKHF 290 Query: 218 TQHTYSVD 225 + + D Sbjct: 291 AKGFEARD 298 >gi|251796881|ref|YP_003011612.1| polar amino acid ABC transporter inner membrane protein [Paenibacillus sp. JDR-2] gi|247544507|gb|ACT01526.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. JDR-2] Length = 216 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 57/165 (34%), Positives = 99/165 (60%), Gaps = 1/165 (0%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL +A I+ V+S ++G +R + ++S I+ V R PLL+ LF ++ +P Sbjct: 21 ITLWVAFIAIVLSFVLGSITGTLR-YMRIPVVSRILGVIVEFIRNLPLLLILFFTYFAMP 79 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 +G+ + I+ L + +A ISEI+RS + SIP GQ +A+ + GLT QT+ HI+LP Sbjct: 80 DVGLKLGVMSSAIVGLAVFEAAMISEIVRSGLSSIPIGQVEAARSSGLTYTQTVWHIVLP 139 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 Q + P+ S+FIS+LK TS+A I++PE+ ++ +++ + Sbjct: 140 QGLRRMVPPIVSQFISLLKDTSLAIVISLPELMHNSKIVIAQNFD 184 >gi|154483128|ref|ZP_02025576.1| hypothetical protein EUBVEN_00829 [Eubacterium ventriosum ATCC 27560] gi|149735936|gb|EDM51822.1| hypothetical protein EUBVEN_00829 [Eubacterium ventriosum ATCC 27560] Length = 229 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 63/170 (37%), Positives = 103/170 (60%), Gaps = 5/170 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++ T+ I ++ + SL G +A R+ I+ +++ Y+ I RGTPL++Q+ I++ Sbjct: 26 GMIETVKIFVLTLLFSLPFGLVVAWGRMS-RIKIVKWLVNIYISIMRGTPLMLQVMAIYF 84 Query: 80 G---LPHIGIVFD-SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 G L I I D F A+IIS LN++AY +EI RS I S+P+GQ++A+ +G + QT Sbjct: 85 GPSYLLKIQISRDYRFYAVIISFVLNYAAYFAEIYRSGIESMPRGQYEAANMLGYNKAQT 144 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 IILPQ I +++E I ++K TS+A +I E+F A++I S+T Sbjct: 145 FMKIILPQVIKRILPSITNEVICLVKDTSLAFSIAYMEMFSIAKQIASST 194 >gi|319779862|ref|YP_004139338.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317165750|gb|ADV09288.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 224 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 85/143 (59%), Gaps = 5/143 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y IFR P+LV L +I+Y LP +GI S+ + + + SAY +E+ RS I SIP+G Sbjct: 63 YTDIFRALPVLVVLILIYYALPFLGIRLSSWASAVTAFAFIMSAYSAEVFRSGIESIPRG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++AS A+GL T+R ++LPQ I P++S +S+ K TS+AST+ +PE+ + A Sbjct: 123 QFEASQALGLPFLLTLRKVVLPQAIRVVIPPMTSNCVSMFKDTSLASTVALPELLKEATN 182 Query: 181 IVS--TTYQPLIIYCELAFVYLI 201 S PLI A VYLI Sbjct: 183 AQSLYANPSPLI---GAALVYLI 202 >gi|171318277|ref|ZP_02907438.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171096541|gb|EDT41437.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 248 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 99/169 (58%), Gaps = 9/169 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIR 111 Y+ +FRG+PLL+Q+F+++YGL G++ +SF V ++SL L + Y +EI+R Sbjct: 58 YILVFRGSPLLIQMFLVYYGLGQFGVIRESFIWPLLREPYVCAVLSLALCTAGYTAEILR 117 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++++P GQ +A Y+IGL+ +R +I P + S+E + ++KST++AS +T+ Sbjct: 118 GGLMAVPVGQIEAGYSIGLSGFALLRSVIGPIALRQCLPAYSTEAVLLVKSTALASLVTV 177 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E+ AQ+I+ TY+ ++ A +YL L + +E ++ H Sbjct: 178 WEVTGVAQQIIQQTYRTTEVFVCAALIYLGLNFIVVRLLGALEWRLSGH 226 >gi|163748031|ref|ZP_02155353.1| amino acid ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] gi|161378691|gb|EDQ03138.1| amino acid ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] Length = 244 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 65/225 (28%), Positives = 123/225 (54%), Gaps = 13/225 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+++I+ +P+LL ++TL + + I+ + +A+IR S I + Y+ Sbjct: 4 FDIMIEYWPRLL-DGTLMTLKLTFMGAFIAALFSPGLALIRANTS-PIAQAPLRLYISFM 61 Query: 66 RGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 RGTP+L QLF+I+YG G D F +++ LN +AY +EI+R I+ Sbjct: 62 RGTPILGQLFLIYYGSGQFRPFLQDWGLWGFFRDPFNCALLAFALNSTAYQTEILRGGIM 121 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 + +G+ +A+ AIG+TR Q +R + P + L +E I ++K++++AS +T+ +I Sbjct: 122 GVARGEIEAAKAIGMTRLQILRRVTFPHAYRIAWPALGNEIILLMKASALASVVTVFDIM 181 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++I S T+ IY A +YL +T+ ++ + E+ +++H Sbjct: 182 GRTRQIFSRTFD-FSIYLWAALIYLCITAIFVLLWRQGETRLSRH 225 >gi|50122414|ref|YP_051581.1| putative amino acid ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|261822705|ref|YP_003260811.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|49612940|emb|CAG76391.1| putative amino acid ABC transporter, permease protein [Pectobacterium atrosepticum SCRI1043] gi|261606718|gb|ACX89204.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 217 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 104/184 (56%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ +F+ ++ F + ++R+ + +H Y +F+GTPLL+QLF+ F+GL Sbjct: 19 TLLLSLTAFIGGALVTFPLMLLRLT-KRKWATRFVHLYSELFQGTPLLMQLFLAFFGLAL 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 GI + A ++LTL SA++ +I S+ ++PKGQW+AS +GL QT+ +I PQ Sbjct: 78 FGIDVSPWTAAALALTLFTSAFLVDIWCGSVEALPKGQWEASRCLGLDFGQTLYRVIAPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T++AS I E+ + + + TYQP ++ +A Y ++ Sbjct: 138 AMRIAIAPTVGFSVQVIKGTALASIIGFIELTKAGTMLNNVTYQPFKVFGLVALGYFLM- 196 Query: 204 SFCY 207 CY Sbjct: 197 --CY 198 >gi|312171453|emb|CBX79711.1| putative ABC transport system, inner membrane component [Erwinia amylovora ATCC BAA-2158] Length = 221 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 62/191 (32%), Positives = 107/191 (56%), Gaps = 2/191 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 +PQL+ + + T+ + ++ V + +G A +R T+ S + YV + R TP +V Sbjct: 14 WPQLI-SGLWATIQLTVMATVGGVALGMVGAALR-SGKPTLASRLWGVYVELIRNTPFVV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I +GLP++G+ + A ++++ +N AY +EIIR+ I PKGQW+A+ +GLTR Sbjct: 72 QLFFIVFGLPNLGLKLTAGEAALLAMLINLGAYSTEIIRAGIRVTPKGQWEAARVLGLTR 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +QT ++LP + L S+ I ++ +SV S ++ E+ A I S T+ +Y Sbjct: 132 QQTFIRVVLPPAMKRIYPALVSQCIIVMLGSSVVSQVSFEELTFAANLIQSRTFLSFEVY 191 Query: 193 CELAFVYLILT 203 +YL L+ Sbjct: 192 LVTTLLYLALS 202 >gi|319744951|gb|EFV97281.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus agalactiae ATCC 13813] Length = 224 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 102/167 (61%), Gaps = 4/167 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWIFRG 67 I++ P LL A VTL + I +S+ +G +A ++++ F + ++ Y+WI RG Sbjct: 15 ILEILPSLLVGA-QVTLQVFFIVICLSIPLGIVVAFLMKVHFKP--LQWLLTTYIWIMRG 71 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QL +Y LP +GI FD A II+ T+N++AY +EI R I SIPKGQ++A+ Sbjct: 72 TPLLLQLIFFYYFLPSVGISFDRMPAAIIAFTMNYAAYFAEIFRGGIESIPKGQYEAAKV 131 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 + ++ QT+ +I+LPQ + +E I+++K +S+ + + ++ Sbjct: 132 LKFSKFQTVWYIVLPQVFKIVLPSVFNETITLVKDSSLVYILGVGDL 178 >gi|270284367|ref|ZP_05965993.2| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Bifidobacterium gallicum DSM 20093] gi|270276731|gb|EFA22585.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Bifidobacterium gallicum DSM 20093] Length = 322 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 70/238 (29%), Positives = 126/238 (52%), Gaps = 29/238 (12%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++EW + F + + + + TL + IS V+++I+ +A++R + ++ + F+ Sbjct: 46 RFEWNVVWKYLFNERVLSGVGYTLLLTVISMVVAIILAVILAIMRKSV-NPVLRGVSWFF 104 Query: 62 VWIFRGTPLLVQLFVIFYGL-----PHI--GIVFDS--------------FVAIIISLTL 100 +W FRGTP+ QL +F+GL P + GI F S F A I L L Sbjct: 105 IWFFRGTPVYTQL--VFWGLFAVLIPKLSLGIPFTSIEFWSVDSKTVITAFNAAWIGLAL 162 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N +AY+SEI+R+ + ++ GQ +A+ A+G+ R Q +R ++LPQ + P +E I +L Sbjct: 163 NEAAYLSEIVRAGLEAVDPGQTEAAQALGMKRAQIMRRVVLPQAMRIIIPPTGNETIGML 222 Query: 161 KSTSVASTITIP---EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 K+TS+ + +P E+ I + Y+P+ + A YL +TS ++Q ++E Sbjct: 223 KTTSL--VLAVPFTLELQFATNAIANRIYKPIPLLLVAAIWYLFITSIMMVLQSRLEK 278 >gi|73748260|ref|YP_307499.1| amino acid ABC transporter, permease protein [Dehalococcoides sp. CBDB1] gi|289432311|ref|YP_003462184.1| polar amino acid ABC transporter inner membrane protein [Dehalococcoides sp. GT] gi|73659976|emb|CAI82583.1| amino acid ABC transporter, permease protein [Dehalococcoides sp. CBDB1] gi|288946031|gb|ADC73728.1| polar amino acid ABC transporter, inner membrane subunit [Dehalococcoides sp. GT] Length = 273 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 91/161 (56%), Gaps = 14/161 (8%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP----------HIGIVFD----SFVAII 95 +T+I I FYV I RG PLLVQL ++ P + G + + V I Sbjct: 88 QNTLIRGIATFYVEIVRGIPLLVQLIWWYFAFPVIIQTIGQALNFGPMLNYQANPIVMAI 147 Query: 96 ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSE 155 +T + AY+SEI R+ I SIPKGQ +A+ ++G++ Q +R IILPQ + P+ +E Sbjct: 148 WGMTFCYGAYMSEIYRAGIQSIPKGQMEAARSLGMSHTQAMRFIILPQALRVVLPPMGNE 207 Query: 156 FISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 FIS+LK TS+ ST+ + ++ + + +T + P+ ++ +A Sbjct: 208 FISLLKDTSLVSTVAVADMVRLGREFTATNFNPIEVWSMIA 248 >gi|227113605|ref|ZP_03827261.1| putative amino acid ABC transporter, permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 218 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 104/184 (56%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ +F+ I+ F + ++R+ + +H Y +F+GTPLL+QLF+ F+GL Sbjct: 20 TLLLSLTAFIGGAIVTFPLMLLRLT-KRKWPTRFVHLYSELFQGTPLLMQLFLAFFGLAL 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 GI + A ++LTL SA++ +I S+ ++PKGQW+AS +GL QT+ +I PQ Sbjct: 79 FGIDVSPWTAAALALTLFTSAFLVDIWCGSVEALPKGQWEASRCLGLDFGQTLYRVIAPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T++AS I E+ + + + TYQP ++ +A Y ++ Sbjct: 139 AMRIAIAPTVGFSVQVIKGTALASIIGFIELTKAGTMLNNVTYQPFKVFGLVALGYFLM- 197 Query: 204 SFCY 207 CY Sbjct: 198 --CY 199 >gi|146319535|ref|YP_001199247.1| amino acid ABC transporter periplasmic protein [Streptococcus suis 05ZYH33] gi|145690341|gb|ABP90847.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus suis 05ZYH33] Length = 297 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 54/152 (35%), Positives = 89/152 (58%), Gaps = 11/152 (7%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---------IFFSDTIISL 56 +N++++++ QLL +TL I+ + +I IG I V R + ++ Sbjct: 141 WNIVVNNWQQLLRG-TGMTLLISILGTIIGTAIGLLIGVFRTAPKAANKALAIGQKVLGW 199 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 I++ Y+ IFRGTP++VQ VI+YG G+ D +A I +++N AY+SEI+R I Sbjct: 200 IINIYIEIFRGTPMIVQSMVIYYGTAQAFGLNLDRTLAAIFIVSINTGAYMSEIVRGGIF 259 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 ++ KGQ++A+ A+G T QT+R I+LPQ I Sbjct: 260 AVDKGQFEAATALGFTHNQTMRKIVLPQVIRN 291 >gi|16079799|ref|NP_390623.1| glutamine ABC transporter permease [Bacillus subtilis subsp. subtilis str. 168] gi|221310682|ref|ZP_03592529.1| glutamine ABC transporter (integral membrane protein) [Bacillus subtilis subsp. subtilis str. 168] gi|221315005|ref|ZP_03596810.1| glutamine ABC transporter (integral membrane protein) [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319926|ref|ZP_03601220.1| glutamine ABC transporter (integral membrane protein) [Bacillus subtilis subsp. subtilis str. JH642] gi|221324207|ref|ZP_03605501.1| glutamine ABC transporter (integral membrane protein) [Bacillus subtilis subsp. subtilis str. SMY] gi|81815728|sp|O34606|GLNP_BACSU RecName: Full=Probable glutamine ABC transporter permease protein glnP gi|2635191|emb|CAB14687.1| glutamine ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] gi|28375455|emb|CAA93320.1| integral membrane protein [Bacillus subtilis subsp. subtilis str. 168] gi|291485152|dbj|BAI86227.1| glutamine ABC transporter, integral membrane protein [Bacillus subtilis subsp. natto BEST195] Length = 218 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 63/163 (38%), Positives = 96/163 (58%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ +VTL +A IS ++S G +R + ++S ++ V R PLL+ +F Sbjct: 15 LWDGFLVTLYVAFISIILSFFFGLIAGTLR-YAKVPVLSQLIAVLVETIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 F+ LP IGI + A I +LT+ SA +SEIIRS + SI KGQ +A+ + GL+ QT+ Sbjct: 74 TFFALPEIGIKLEITAAAITALTIFESAMLSEIIRSGLKSIDKGQIEAARSSGLSYTQTL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 I++PQ + P+ S+FIS+LK TS+A I +PE+ AQ Sbjct: 134 FFIVMPQALRRMVPPIVSQFISLLKDTSLAVVIALPELIHNAQ 176 >gi|68249724|ref|YP_248836.1| arginine transporter permease subunit ArtM [Haemophilus influenzae 86-028NP] gi|68057923|gb|AAX88176.1| arginine transport system permease protein [Haemophilus influenzae 86-028NP] Length = 227 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 58/177 (32%), Positives = 101/177 (57%), Gaps = 10/177 (5%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTL 100 + I ++ Y+ +F GTPLLVQ F+I+ G + DS + +++L L Sbjct: 41 ENKWIKSAVNLYLTLFTGTPLLVQFFLIYAGPGQFQWIIDSPLWYVLSNAWFCAVLALAL 100 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N +AY +++ ++ +IPKGQW++ A+GL+R QT++ I++P + + S+E I + Sbjct: 101 NSAAYSTQLFHGAVKAIPKGQWESCAALGLSRLQTLK-ILIPYALKRALPSYSNEIILVF 159 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 K T++ASTITI +I A+++ T Y + IY +YLI+T ++ K+E V Sbjct: 160 KGTALASTITIMDIMGYARQLYGTEYDAITIYGIAGGIYLIITGIATLLLRKLEKKV 216 >gi|255521708|ref|ZP_05388945.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL J1-175] Length = 429 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 64/200 (32%), Positives = 112/200 (56%), Gaps = 9/200 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +I D P L + +TL I +S + I+G +++ RI+ ++ + Y+ FR Sbjct: 8 KMIADFIPTLA-GYLPITLYILALSLIFGFILGVLLSLPRIY-KIPVLDQLARVYISFFR 65 Query: 67 GTPLLVQLFVIFYGLPH----IGI---VFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 GTP++VQLF++FYG+P +GI D A I + L+ +A I+E+IR+ + S+ Sbjct: 66 GTPIMVQLFIVFYGIPALSSIVGIDLSQMDPLYAAIATYALSSAATIAEVIRAGVNSVDA 125 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+Y+IGL+ +QT IILPQ + + + I LK TS+A +I + ++ Q Sbjct: 126 GQAEAAYSIGLSSRQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQ 185 Query: 180 RIVSTTYQPLIIYCELAFVY 199 +++ + L +Y L+ +Y Sbjct: 186 TLITLSNHALEVYISLSIIY 205 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 94/172 (54%), Gaps = 18/172 (10%) Query: 20 AIVVTLPIACISFVISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 A++ T+P+ ++ GF IA+ IR++ + I FYV FR TP ++ + Sbjct: 257 AMLKTIPLTLAMTFFPILFGFIIAIGMTLIRMYHV-RFLEPIAKFYVSFFRSTPAILHIM 315 Query: 76 VIFYGLP----------HIGIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +I+ G+P +GI + + +II+L+ AY++EI+RS II++ GQ Sbjct: 316 LIYLGIPLLVDFLSKSFGLGISANKIPVVIFVIIALSFTAGAYLTEILRSGIIAVDIGQM 375 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +A+Y++G T Q IR ++LPQ + ++ I L +TS+A+ + +PEI Sbjct: 376 EAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEI 427 >gi|226941143|ref|YP_002796217.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Laribacter hongkongensis HLHK9] gi|226716070|gb|ACO75208.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Laribacter hongkongensis HLHK9] Length = 247 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 70/230 (30%), Positives = 122/230 (53%), Gaps = 38/230 (16%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF----- 60 F++I++ P L + +TL I I+ V+ +IG F+ + R+ +D + + Sbjct: 5 FSMIVEYAP-LFIDGVKMTLGITVIAVVLGTLIGLFMGMARL--ADARHGMGKYLLRYCV 61 Query: 61 ------YVWIFRGTPLLVQLFVIFYGL------PHIGIV------------FDSFVAIII 96 YV FRGTPL VQ+ ++ + L P GI+ + +F + ++ Sbjct: 62 KWPATAYVTFFRGTPLFVQILLVHFALMPTLVHPVDGILISGDLAREIRQNYGAFFSGLL 121 Query: 97 SLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF 156 +LTLN AYI+EI R+ I+SI KGQ +A+ ++G++ Q +R +++PQ PL +E Sbjct: 122 ALTLNAGAYITEIFRAGILSIDKGQMEAARSLGMSYGQAMRFVVVPQAFRRMLPPLGNEA 181 Query: 157 ISILKSTSVASTITIPEI---FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I +LK +S+ S I + E+ +T + S ++P Y ++F+YL LT Sbjct: 182 IMLLKDSSLVSAIGLAELAFAARTVAGVYSRYWEP---YLTISFMYLALT 228 >gi|241666976|ref|YP_002985060.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862433|gb|ACS60098.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 222 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y+ F +ID P LL + L +A +++++IG +R L++ Sbjct: 1 MNYKLDFTPVIDGLPNLLLGCLGTFL-LAICGMLLAIVIGIGGVALRDSALKPARWLVIA 59 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 F V + R TP LVQ+F I++ LP GI D II+L +N AY EIIR + SIPK Sbjct: 60 F-VELIRNTPFLVQIFFIYFALPLTGIRLDPTPTAIIALGINGGAYAIEIIRGGVQSIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A A+GL + Q R IIL + L+S+F+ + +TS+AS I+ E+ +Q Sbjct: 119 GQMEAGLALGLHKAQVFRLIILKPALRAIYPSLTSQFVLLTLTTSIASAISAYELTSVSQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 RI S +++ +Y + Y +++ Sbjct: 179 RIESESFRSFEVYFTVTVFYFVIS 202 >gi|300936885|ref|ZP_07151772.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|300457996|gb|EFK21489.1| ABC transporter, permease protein [Escherichia coli MS 21-1] Length = 238 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 117/213 (54%), Gaps = 11/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + +S VI ++ F+A+ R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLILSVVIGGVLALFLAIGRVS-SNKYIQFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTEFLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T+T+P++ + A+ I + TYQ Sbjct: 139 YGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTVTVPDLLKIARDINAATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P + A +YLI++ + + E QH Sbjct: 199 PFTAFGIAAVLYLIISYVLISLFRRAEKRWLQH 231 >gi|227509839|ref|ZP_03939888.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190763|gb|EEI70830.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 235 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 114/206 (55%), Gaps = 11/206 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W N+ + L VT+ ++ S V+S I G + V R + +S I+ F + Sbjct: 8 YSWVNI------KFLLEGAWVTILVSVCSIVLSYIFGVILGVTR-YVQIKYLSAIVGFVI 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PL++ +F ++GLPH+G D A +I++ + +A ++EI+R+ I SIP GQ Sbjct: 61 DIIRNLPLILIIFFTYFGLPHLGFKPDPIWASVIAMAVFEAAMVAEIVRAGIASIPTGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + A GL+ Q + +I+LPQ I + S+FIS++K TS+A+ I +P++ AQ I Sbjct: 121 EGARANGLSYWQALWYIVLPQAIRNMIPAIVSQFISLVKDTSLATIIVLPDLMNHAQIIY 180 Query: 183 S-TTYQPLIIYCELAFVYLILTSFCY 207 T + ++ LA +Y I+ CY Sbjct: 181 GQNTNYTIPMFLALAVMYFIV---CY 203 >gi|218191223|gb|EEC73650.1| hypothetical protein OsI_08176 [Oryza sativa Indica Group] Length = 449 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 105/179 (58%), Gaps = 5/179 (2%) Query: 30 ISFVISLIIGFFIAVIRIF---FSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-- 84 + F LI G I ++ F + I + I ++ + RGTP++VQ+ I++ LP Sbjct: 254 VDFGPRLIGGLIIGLVAGFARTYGGWIANHIALVFIEVIRGTPIVVQVMFIYFALPMAFT 313 Query: 85 GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQT 144 + D F A ++++ +N AYI+EI R +++SI G +A A+GL+R++TIR++I+P Sbjct: 314 DLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSRRETIRYVIMPLA 373 Query: 145 ITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + PL +++I +K TS+ I + E+ + Q I++ ++ L I+ +A +YLI+T Sbjct: 374 LRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLIIT 432 >gi|170701275|ref|ZP_02892241.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170133798|gb|EDT02160.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 248 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 99/169 (58%), Gaps = 9/169 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIR 111 Y+ +FRG+PLL+Q+F+++YGL G++ +SFV ++SL L + Y +EI+R Sbjct: 58 YILVFRGSPLLIQMFLVYYGLGQFGVIRESFVWPLLREPYVCAVLSLALCTAGYTAEILR 117 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++++P GQ +A Y+IGL+ +R +I P + S+E + ++KST++AS +T+ Sbjct: 118 GGLMAVPVGQIEAGYSIGLSGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTV 177 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E+ AQ+I+ TY+ ++ A +YL L + +E ++ H Sbjct: 178 WEVTGVAQQIIQQTYRTTEVFVCAALIYLGLNFIVVRLLGALEWRLSGH 226 >gi|115360581|ref|YP_777718.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria AMMD] gi|115285909|gb|ABI91384.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia ambifaria AMMD] Length = 248 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 99/169 (58%), Gaps = 9/169 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIR 111 Y+ +FRG+PLL+Q+F+++YGL G++ +SF V ++SL L + Y +EI+R Sbjct: 58 YILVFRGSPLLIQMFLVYYGLGQFGVIRESFIWPLLREPYVCAVLSLALCTAGYTAEILR 117 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++++P GQ +A Y+IGL+ +R +I P + S+E + ++KST++AS +T+ Sbjct: 118 GGLMAVPVGQIEAGYSIGLSGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTV 177 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E+ AQ+I+ TY+ ++ A +YL L + +E ++ H Sbjct: 178 WEVTGVAQQIIQQTYRTTEVFVCAALIYLGLNFIVVRLLGALEWRLSGH 226 >gi|225405626|ref|ZP_03760815.1| hypothetical protein CLOSTASPAR_04847 [Clostridium asparagiforme DSM 15981] gi|225042846|gb|EEG53092.1| hypothetical protein CLOSTASPAR_04847 [Clostridium asparagiforme DSM 15981] Length = 233 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 122/225 (54%), Gaps = 17/225 (7%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHF 60 + N I D + + + TL I + ++ +++GF + ++R + T I++ I Sbjct: 13 YLNFIEDDGWKYITVGLKNTLIITFFACLMGIVLGFLVGMVRSTYEKTHKLKILNAICKV 72 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF-----VAIIISLTLNFSAYISEIIRSSII 115 Y+ + RGTP++VQL +I++ +VF S + +++ +N AY++EI RS I+ Sbjct: 73 YLTVIRGTPVVVQLMIIYF------VVFGSVRISKVLVAVLAFGINSGAYVAEIFRSGIM 126 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SI GQ +A ++G + QT+ +II+PQ L +EFIS+LK TSVA I + ++ Sbjct: 127 SIDSGQLEAGRSLGFSYWQTMWYIIMPQAFKNVLPALCNEFISLLKETSVAGYIALQDLT 186 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYL-ILTSFCYIIQIKIESSVTQ 219 + I S TY + +A +YL I+ F +IQI +E + Q Sbjct: 187 KGGDIIRSRTYSAFMPLFAVALIYLTIVMIFTKLIQI-LERRLRQ 230 >gi|170721983|ref|YP_001749671.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169759986|gb|ACA73302.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 236 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 65/234 (27%), Positives = 133/234 (56%), Gaps = 21/234 (8%) Query: 4 EWFNLIIDSFPQLLYA-------AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 +W +L++D P LL ++VT + ISF + ++G +A+ R+ + + Sbjct: 5 QWLSLVLD--PDLLERYGPRFIDGLLVTAKLVAISFTLGAVLGLLLALARMS-RNLPLQR 61 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP-------HIGIVF---DSFVAIIISLTLNFSAYI 106 + Y++ FRG+PLL QLF+++YGL +G+ + ++++ +++ TLN +AY Sbjct: 62 LAAGYIYFFRGSPLLAQLFLLYYGLGSLKEFWQDVGLWWFFREAWLCTLLAFTLNTAAYQ 121 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EI+R S++++ GQ++A+ A+ L R T +ILPQ++ + PL +E I ++K++++A Sbjct: 122 AEILRGSLMAVAPGQYEAARALNLKRSTTFFKVILPQSLLVAIGPLGNELILMIKASAIA 181 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S +TI ++ + S ++ IY A +YL++ + +E+ + +H Sbjct: 182 SLVTIYDLMGVTKLAFSRSFD-FQIYLWAAVLYLVIVELVRRLLKHLEARLGRH 234 >gi|332638159|ref|ZP_08417022.1| polar amino acid ABC transporter permease [Weissella cibaria KACC 11862] Length = 214 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 101/170 (59%), Gaps = 7/170 (4%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLL 71 P LL + + +T + ++ + S+ +G +A+ SD ++ + + Y+W+ RGTPLL Sbjct: 8 MPSLL-SGLKMTFGVFALTLIGSVPLGILVALA--LKSDIYLLRWVTNAYIWVMRGTPLL 64 Query: 72 VQLFVIFYGL--PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +Q+ ++YGL HI + F A +++ LN++AY +EI R + S+P+GQ+D + +G Sbjct: 65 LQIVFVYYGLSLAHI-VTLPRFEAAVVTFILNYAAYFAEIFRGGLQSVPQGQYDGAKVLG 123 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 LTR QT+R I+LPQ + + +E ++++K +S+ I + ++ + Sbjct: 124 LTRWQTMRKIVLPQVVKIVMPSVGNEVVTLVKDSSLVYVIGLGDLMRAGN 173 >gi|158422441|ref|YP_001523733.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158329330|dbj|BAF86815.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 220 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 109/201 (54%), Gaps = 4/201 (1%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF-FSDTIISLIMHFY 61 Y W ++ S+ LL + VT+ V+ L IG + ++ F + + Y Sbjct: 2 YHWDFGLVWSYRWLLLDGLGVTVAFTIAIVVLGLAIGLLAGLAKLSPFRP--VGWLASAY 59 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + +FR TP+LVQL +Y +P + GI +F A I++L+L ++ +EIIR I+SI +G Sbjct: 60 IEVFRCTPVLVQLIWFYYAMPILTGIEMSAFTAGILALSLYGGSFYAEIIRGGIVSIDRG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A+G+ Q +R ++LPQ + PL ++ I K+TS+ S + +P++ Q Sbjct: 120 QTEAGEALGMVPSQIMRRVVLPQALKRMVPPLMNQSIIQFKNTSLVSVLAVPDLLYQGQV 179 Query: 181 IVSTTYQPLIIYCELAFVYLI 201 +Y+PL +Y +A +Y + Sbjct: 180 AAHDSYRPLELYTVIAIIYFL 200 >gi|46579380|ref|YP_010188.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|120603064|ref|YP_967464.1| polar amino acid ABC transporter inner membrane protein [Desulfovibrio vulgaris DP4] gi|46448794|gb|AAS95447.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio vulgaris str. Hildenborough] gi|120563293|gb|ABM29037.1| amino acid ABC transporter membrane protein, PAAT family [Desulfovibrio vulgaris DP4] gi|311233203|gb|ADP86057.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris RCH1] Length = 337 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 122/210 (58%), Gaps = 19/210 (9%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 S P +L + +TL ++ ++ +I +++G + RI + + L + Y+ I RG+PLL Sbjct: 122 SKPGILLEGLWITLEVSMLAIIIGIVLGVVTGLARISVNPALRWLAIT-YIEIIRGSPLL 180 Query: 72 VQLFVIFYGLPHIGIVFDSF---VAI---------IISLTLNFSAYISEIIRSSIISIPK 119 VQ+F+ ++ +G + ++ V + +++L + AY++EI+R+ I S+ + Sbjct: 181 VQVFLWYF---VVGTLLNALFEKVGLSAIPPLWYGVMALAIFTGAYVAEIVRAGIQSVHR 237 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ ++G++ Q++R +ILPQ PL+ +FIS++K +S+ I + E+ + + Sbjct: 238 GQMEAARSLGMSYAQSMRKVILPQAFRRIMPPLAGQFISLVKDSSLLGVIAVRELTKATR 297 Query: 180 RIVSTTYQPLIIYCELAFVYLILT---SFC 206 +V+T+ QP ++ A +YL+LT S C Sbjct: 298 EVVTTSLQPFELWIVCALLYLVLTFTLSLC 327 >gi|283783516|ref|YP_003374270.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05] gi|283441667|gb|ADB14133.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05] Length = 333 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 128/248 (51%), Gaps = 29/248 (11%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++EW + I + + I TL + I+ VIS++ +A++R + ++ + F+ Sbjct: 52 RFEWQVVGIYLISDNVLSGIGWTLLLTLIAMVISIVFAVGLAMMRKSV-NPVLRGVSWFF 110 Query: 62 VWIFRGTPLLVQLFVIFYGL-----PHIGI----------------VFDSFVAIIISLTL 100 +W FRGTP+ QL +F+G+ P I I + S A ++ L+L Sbjct: 111 IWFFRGTPVYTQL--VFWGMFAVLVPRISIGIPFTSVEFWSIDSNVIMTSLTAAVVGLSL 168 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N SAY+SEI+R+ + ++ GQ +A+ A+G+ R T+R +ILPQ + PL +E I +L Sbjct: 169 NESAYLSEIVRAGLEAVDSGQVEAAKALGMGRALTMRRVILPQAMRIIVPPLGNETIGML 228 Query: 161 KSTSVASTITIP---EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 K+TS+ + +P E+ I + Y+P+ + + YLI+TS ++Q +E Sbjct: 229 KTTSL--VLAVPFTLELQFATNAIANRIYKPIPLLLVASIWYLIITSILMVLQYMLEKHF 286 Query: 218 TQHTYSVD 225 + + D Sbjct: 287 AKGFEARD 294 >gi|325570568|ref|ZP_08146294.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] gi|325156414|gb|EGC68594.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] Length = 493 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 60/178 (33%), Positives = 107/178 (60%), Gaps = 3/178 (1%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 +A + + I G +A +++ S + +I Y+ RGTPLLVQ+F++++G +G+ Sbjct: 300 LALVGVLFGSIGGSLLAFMKLSKSKAL-KVIAAVYIEYVRGTPLLVQIFIVYFGTGVLGL 358 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 A I+L LN +AY++EIIR+ I ++ KGQ +A+ ++G+ + Q +R II PQ I Sbjct: 359 ELSKLAAGCIALALNSAAYVAEIIRAGINAVNKGQLEAARSLGMNQIQAMRFIIFPQAIK 418 Query: 147 TSAVPLSSEFISILKSTSVASTITIPE-IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +EF++++K +SV S I + E IFQT + +++P + Y ++ +Y +LT Sbjct: 419 NILPALGNEFVTVIKESSVVSVIGVSELIFQTGV-VQGASFKPFLPYVIVSLIYFVLT 475 >gi|257868053|ref|ZP_05647706.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257874383|ref|ZP_05654036.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257802136|gb|EEV31039.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257808547|gb|EEV37369.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] Length = 493 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 60/178 (33%), Positives = 107/178 (60%), Gaps = 3/178 (1%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 +A + + I G +A +++ S + +I Y+ RGTPLLVQ+F++++G +G+ Sbjct: 300 LALVGVLFGSIGGSLLAFMKLSKSKAL-KVIAAVYIEYVRGTPLLVQIFIVYFGTGVLGL 358 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 A I+L LN +AY++EIIR+ I ++ KGQ +A+ ++G+ + Q +R II PQ I Sbjct: 359 ELSKLAAGCIALALNSAAYVAEIIRAGINAVNKGQLEAARSLGMNQIQAMRFIIFPQAIK 418 Query: 147 TSAVPLSSEFISILKSTSVASTITIPE-IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +EF++++K +SV S I + E IFQT + +++P + Y ++ +Y +LT Sbjct: 419 NILPALGNEFVTVIKESSVVSVIGVSELIFQTGV-VQGASFKPFLPYVIVSLIYFVLT 475 >gi|145224166|ref|YP_001134844.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium gilvum PYR-GCK] gi|315444501|ref|YP_004077380.1| amino acid ABC transporter membrane protein, PAAT family [Mycobacterium sp. Spyr1] gi|145216652|gb|ABP46056.1| amino acid ABC transporter membrane protein, PAAT family [Mycobacterium gilvum PYR-GCK] gi|315262804|gb|ADT99545.1| amino acid ABC transporter membrane protein, PAAT family [Mycobacterium sp. Spyr1] Length = 310 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 119/213 (55%), Gaps = 25/213 (11%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-P 82 T+ + S VI +++G + ++R+ S+ ++S + ++WIFRGTP+ VQL F+GL P Sbjct: 72 TIQLTVYSMVIGIVLGVILTIMRLS-SNPVLSSVAWVFLWIFRGTPVYVQL--AFWGLMP 128 Query: 83 ------HIGIVFDS-------------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 +G+ F F +I L LN +AY++EI+R+ I S+P+GQ + Sbjct: 129 TIYQNIQLGVPFGPSLLHFDLQDLSFPFALAVIGLALNEAAYMAEIVRAGITSVPEGQLE 188 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP-EIFQTAQR-I 181 AS A+G++ + +R +LPQ + P +E IS+LK+TS+ + + +++ A R I Sbjct: 189 ASTALGMSWGRAMRRTVLPQAMRVIIPPTGNEVISLLKTTSLVTAVPYAFDLYSIATREI 248 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + ++P+ + A YL++TS + Q +E Sbjct: 249 AARIFEPVPLLLVAATWYLVITSILMVGQFYLE 281 >gi|281422145|ref|ZP_06253144.1| putative amino acid ABC transporter, amino acid-binding/permease protein [Prevotella copri DSM 18205] gi|281403796|gb|EFB34476.1| putative amino acid ABC transporter, amino acid-binding/permease protein [Prevotella copri DSM 18205] Length = 522 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 109/191 (57%), Gaps = 15/191 (7%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFF---SD-TIISLIMHFYVWI 64 I D+ Q L + TL I + ++S+I+G IA++R D I +++ Y+ I Sbjct: 305 IDDNRYQYLLQGLGNTLIITFFAIILSVILGTLIAIVRARHECKGDWKIPNMLCQLYLTI 364 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVF-----DSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 RGTP +VQL +I+Y +VF + + +I+ LN +AYI+E+IRS I+S+ Sbjct: 365 MRGTPTMVQLLIIYY------VVFASADVNKILVAVIAFGLNSAAYIAEVIRSGIMSVDN 418 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A ++GL+ +T+R IILPQ + +E I++LK TS++ I + ++ + + Sbjct: 419 GQMEAGRSLGLSYGKTMRLIILPQAFKNVLPAMGNELITLLKETSISGYIGLVDLTKGSD 478 Query: 180 RIVSTTYQPLI 190 I S TY+ ++ Sbjct: 479 IIRSITYEAMM 489 >gi|157363347|ref|YP_001470114.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga lettingae TMO] gi|157313951|gb|ABV33050.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga lettingae TMO] Length = 239 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 65/212 (30%), Positives = 119/212 (56%), Gaps = 5/212 (2%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++W ++ + ++ +V+T+ ++ S +IS +G A++R S I YV Sbjct: 27 FDW--TVVLKYRRVFINGLVMTMSLSGFSLLISFAVGIVFALMRR--SSGIFREFAILYV 82 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + FR TPLLV + + +YGL I I FD F A ++ L+ AYI+EI+RS + ++ KG+ Sbjct: 83 FFFRNTPLLVVILLTYYGLGSI-IPFDRFWAAVMGLSAFEGAYIAEIVRSGLDAVDKGEL 141 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A++++GLT+ + ++ PQ I S L + IS++K +S+AS I + E+ T +++ Sbjct: 142 EAAFSLGLTKSEVFFYVHFPQAIRISLPALIGQSISLVKDSSLASVIALAELTMTGRQVG 201 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + T Y +A Y+ +TS +I +E Sbjct: 202 TQTLASFESYLTIAVFYVAVTSILSLIGHWLE 233 >gi|257876942|ref|ZP_05656595.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|257811108|gb|EEV39928.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] Length = 493 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 60/178 (33%), Positives = 107/178 (60%), Gaps = 3/178 (1%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 +A + + I G +A +++ S + +I Y+ RGTPLLVQ+F++++G +G+ Sbjct: 300 LALVGVLFGSIGGSLLAFMKLSKSKAL-KVIAAVYIEYVRGTPLLVQIFIVYFGTGVLGL 358 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 A I+L LN +AY++EIIR+ I ++ KGQ +A+ ++G+ + Q +R II PQ I Sbjct: 359 ELSKLAAGCIALALNSAAYVAEIIRAGINAVNKGQLEAARSLGMNQIQAMRFIIFPQAIK 418 Query: 147 TSAVPLSSEFISILKSTSVASTITIPE-IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +EF++++K +SV S I + E IFQT + +++P + Y ++ +Y +LT Sbjct: 419 NILPALGNEFVTVIKESSVVSVIGVSELIFQTGV-VQGASFKPFLPYVIVSLIYFVLT 475 >gi|116255414|ref|YP_771247.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115260062|emb|CAK03161.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 234 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 65/224 (29%), Positives = 124/224 (55%), Gaps = 16/224 (7%) Query: 19 AAIVVTL----PIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLL 71 A+ +VTL P I F +S+I G +A++ ++ + +++ Y++IFRG+PLL Sbjct: 7 ASTLVTLLKAVPTTLILFSLSIITGGLLALVIVWMRTSGNPVLTSFAKGYIFIFRGSPLL 66 Query: 72 VQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +Q+F++FYGL G + SF V ++SL L + Y +EI R I ++ + Sbjct: 67 IQMFLVFYGLGQFGFIRYSFLWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRAVSPKEI 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ +IG++ +R I+ P + S+E + ++KST++AS +T+ E+ AQR++ Sbjct: 127 EAARSIGMSGFLLVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLI 186 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 S TY+ + ++ A +YL+L +E S+++H + + Sbjct: 187 SQTYRTMEVFLCAAIIYLVLNFIILQGMALLEYSLSRHRRAAPQ 230 >gi|89214059|gb|ABD64371.1| amino acid ABC transporter permease protein 1 [Pseudomonas chlororaphis] Length = 222 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 1/203 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y++ L + LL + TL + I ++ + +G AV+R + S + Sbjct: 1 MAYQFDFLPVLENTGLLLRGALFTLELTAIGALLGVGLGIVGAVVRAW-KIQPFSALFGV 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TP LVQLF IF+GLP +G+ + A ++++ +N AY +EIIR+ I +IP+G Sbjct: 60 YVELIRNTPFLVQLFFIFFGLPSLGLQISEWQAAVLAMVINLGAYSTEIIRAGIQAIPRG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+ +TR + RH++L + LSS+ I ++ ++V S I E+ A Sbjct: 120 QLEAAAALAMTRLEAFRHVVLLPALGKVWPALSSQIIIVMLGSAVCSQIATEELSFAANF 179 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I S ++ Y +YL + Sbjct: 180 IQSRNFRAFETYALTTLIYLCMA 202 >gi|254473626|ref|ZP_05087022.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062] gi|211957338|gb|EEA92542.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062] Length = 274 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 23/209 (11%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ + +TL + +SF I+ G FIA+ R II + FY I RG P+LV LF Sbjct: 45 LFKGVGITLFVTFVSFFIASFFGLFIAIGR-GSKHRIIREMCSFYTEIMRGVPMLVLLFY 103 Query: 77 I-FYGLPHIGIVFDSFVA---------------------IIISLTLNFSAYISEIIRSSI 114 I F G P + ++ + II+L+L +SA+I+EI R+ I Sbjct: 104 IAFVGAPQMVAAYNWIMTPLIELEIIDKLRVRDLSMMWRAIIALSLGYSAFIAEIFRAGI 163 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+ +GQ +A A+GL+R T R II PQ PL ++FI+++K +++ S + + +I Sbjct: 164 ESVDEGQLEAGRALGLSRWHTFRFIIWPQAFKNILPPLGNDFIALIKESALVSVLGVQDI 223 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 Q + ++T+Q Y +A++YLI+T Sbjct: 224 TQLGKIYSASTFQFFETYNVVAYLYLIMT 252 >gi|116492195|ref|YP_803930.1| ABC-type amino acid transport system, permease component [Pediococcus pentosaceus ATCC 25745] gi|116102345|gb|ABJ67488.1| amino acid ABC transporter membrane protein 2, PAAT family [Pediococcus pentosaceus ATCC 25745] Length = 218 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 68/192 (35%), Positives = 112/192 (58%), Gaps = 5/192 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + +T+ ++ IS ++S I+G + IR + S I+ F + + R PL++ F Sbjct: 16 LLKGLWITVEVSVISIILSYILGGILGFIR-YMRIKYFSAIVGFIIDLIRNLPLILIFFF 74 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GLP++G+ + + I++LT+ SA ++EIIR I SI KGQ + + A GLT Q + Sbjct: 75 VYFGLPNLGLRIEIIPSSILALTVFESAMLAEIIRGGIESISKGQMEGARANGLTYWQAM 134 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI-IYCEL 195 R+IILPQ L S+FIS++K TS+A+ I +PE+ AQ I +I ++ L Sbjct: 135 RYIILPQAQVRMIPALVSQFISLIKDTSLATIIMLPELMYHAQIIYGQNTNYIIPMFVAL 194 Query: 196 AFVYLILTSFCY 207 A +Y I+ CY Sbjct: 195 AVMYFIV---CY 203 >gi|320355177|ref|YP_004196516.1| PAAT family amino acid ABC transporter membrane protein [Desulfobulbus propionicus DSM 2032] gi|320123679|gb|ADW19225.1| amino acid ABC transporter membrane protein, PAAT family [Desulfobulbus propionicus DSM 2032] Length = 262 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 111/205 (54%), Gaps = 5/205 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IM 58 ++Y W + + Q + TL I+ + +SL+I F A+ R ++ L + Sbjct: 43 LQYGWNWTAVWQYRQKFLHGWMTTLLISVAALGLSLLISVFFALAR---RSRLLPLRYLA 99 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y+ RGTPLLVQ+ V FY + + + +V I++L AY+SEIIR+ I SI Sbjct: 100 MLYIEGVRGTPLLVQILVFFYVVADAFGINNRYVVGILTLAFFAGAYLSEIIRAGIESIG 159 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 + Q +++ AIGL+ QT R +ILPQ + PL+ +F S++K +S+ S I + E A Sbjct: 160 ESQIESARAIGLSPLQTYRFVILPQVVRRILPPLAGQFASLVKDSSLLSIIAVSEFTLNA 219 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT 203 Q + + TY L Y LA YL+LT Sbjct: 220 QEVNAFTYSTLESYLPLAVGYLVLT 244 >gi|312194702|ref|YP_004014763.1| polar amino acid ABC transporter inner membrane protein [Frankia sp. EuI1c] gi|311226038|gb|ADP78893.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EuI1c] Length = 329 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 117/206 (56%), Gaps = 27/206 (13%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-----PHI- 84 + +I ++ G +A++R + ++S + Y W FRGTP+L+QL IF+G P I Sbjct: 101 AMLIGIVGGVLLAIMR-QSPNPLLSGVSWVYTWFFRGTPVLLQL--IFWGTIGALYPRIA 157 Query: 85 -GIVF-------DS------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 GI F DS VA I+ L LN +AY++E++R+ I ++ +GQ +A+ A+G+ Sbjct: 158 VGIPFGPEFASADSNKLIPLIVAGILGLGLNEAAYMAEVVRAGISAVDEGQIEAAQALGM 217 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--P 188 R T+R I+LPQ + P +E IS+LK++S+ S I + E+ + Q I + YQ P Sbjct: 218 GRGLTMRRIVLPQAMKVIIPPTGNETISMLKTSSLVSIIAVIELTYSVQLIYARNYQTIP 277 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIE 214 L+I A YL+LTS + Q +E Sbjct: 278 LLIVA--AIWYLVLTSVLSVGQYFLE 301 >gi|254465169|ref|ZP_05078580.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacterales bacterium Y4I] gi|206686077|gb|EDZ46559.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacterales bacterium Y4I] Length = 244 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 61/224 (27%), Positives = 124/224 (55%), Gaps = 13/224 (5%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +++ +P+LL ++ T+ + + +I+ ++ A+IR+ S + + YV R Sbjct: 5 EILVQYWPRLLDGTLM-TIKLTLLGALIAALVSPAFALIRVHVSP-VAQAPLRLYVSFMR 62 Query: 67 GTPLLVQLFVIFYG-------LPHIGI---VFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 GTP+L QLF+IFYG L G+ D F +++ LN +AY +EI+R I+ Sbjct: 63 GTPILAQLFLIFYGSGQFRPLLQEWGLWTFFRDPFNCALLAFALNSTAYQTEILRGGILG 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+G+ +A+ AIG++R +R ++ P + L +E I ++K++++AS +T+ ++ Sbjct: 123 VPRGEIEAAKAIGMSRFTALRRVVFPHAYRIAWPALGNEVILLMKASALASVVTVFDVMG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++I S T+ +Y A +YL +T+ ++ + E +++H Sbjct: 183 RTRQIFSKTFD-FSVYLWAALIYLCITAVFVLLWRQAERRLSRH 225 >gi|199598208|ref|ZP_03211630.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus rhamnosus HN001] gi|258508351|ref|YP_003171102.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG] gi|199590969|gb|EDY99053.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus rhamnosus HN001] gi|257148278|emb|CAR87251.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus GG] gi|259649665|dbj|BAI41827.1| amino acid ABC transporter permease and substrate binding components [Lactobacillus rhamnosus GG] Length = 485 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 65/180 (36%), Positives = 109/180 (60%), Gaps = 9/180 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ I +++G A++R+ + LI Y+ RGTPL++Q+ +++G Sbjct: 290 TLLISAIGAFFGVLLGTIFALLRLS-KHRLPHLIGVAYIEFVRGTPLMIQVMFVYFG--- 345 Query: 84 IGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IGI D + VA +I+++LN +AY++EIIRS I SIP GQ +A+ ++GL+ +QT+ ++L Sbjct: 346 IGIFIDIPALVAGLIAVSLNSAAYVAEIIRSGIDSIPIGQTEAARSLGLSERQTMTSVVL 405 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY---QPLIIYCELAFV 198 PQ I L +EFIS++K +S+ S I + ++ + + TY QP++I L FV Sbjct: 406 PQAIKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLTVVQTATYKGVQPILIAMVLYFV 465 >gi|114566598|ref|YP_753752.1| hypothetical protein Swol_1071 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337533|gb|ABI68381.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 235 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 61/183 (33%), Positives = 108/183 (59%), Gaps = 7/183 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L ++TL I +S + +G A++++ I+++ Y+ FRGTPL VQ+ + Sbjct: 33 LMKGTLLTLEITALSVAFGMFLGLLAALLKMS-PYKILAIPGIVYIDFFRGTPLFVQILL 91 Query: 77 IFYG-LPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 ++G LP +VFD SF A +I +LN AYI+EI+R+ I ++ +GQ +A+ ++G+ + Sbjct: 92 FYFGILP---LVFDATSFQAAVIVCSLNSGAYIAEIVRAGIQAVDRGQTEAARSLGMNNR 148 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q + ++ILPQ P+ +EFI++LK TS+ + I E+ + +VS TY+ I+ Sbjct: 149 QAMWYVILPQAYKIVIPPMINEFIAMLKDTSLVAVIGAQELTHQGRILVSVTYEAAWIWG 208 Query: 194 ELA 196 +A Sbjct: 209 TVA 211 >gi|329927997|ref|ZP_08282001.1| ABC transporter, permease protein [Paenibacillus sp. HGF5] gi|328938101|gb|EGG34498.1| ABC transporter, permease protein [Paenibacillus sp. HGF5] Length = 482 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 117/223 (52%), Gaps = 9/223 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---DTIISLIM 58 K + LI++S P LL L + ++SL FF+ +I F + + I Sbjct: 265 KQSRWGLIVESLPSLLKG-----LGNTLLLTIVSLFFAFFLGLIFGFMKVGRNRWLRGIA 319 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 +V IFRG PLLV F I++G+P G VA +++L+LN AY++EIIR I SI Sbjct: 320 TVFVDIFRGIPLLVLAFFIYFGIPQAFGFTMSPIVAAVLTLSLNAGAYVTEIIRGGIQSI 379 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQ +A+ ++GL ++ + II+PQ I ++ + LK TS+ S I + E+ Q+ Sbjct: 380 DPGQLEAARSLGLPYRKAMMKIIIPQAIKVMIPTFINQLVITLKDTSILSVIGLVELTQS 439 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + I++ T+ I+ +A +YL++ + I ++E V Sbjct: 440 GKIIIARTFASFDIWLVVAIMYLVVITILTKISDRLERKVRHG 482 >gi|121607782|ref|YP_995589.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121552422|gb|ABM56571.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 221 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 2/200 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y W + + L+ + VT+ + + + +G VIR S + L Sbjct: 1 MDYAWSFGALAPYRALIARGLGVTMLFTLSTVLAGVALGLVAGVIRTHRSRWL-RLPAIA 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ FR TPLLVQL I+Y LP + G+ +A ++LTL A+ +E+ R I ++ K Sbjct: 60 YIEAFRCTPLLVQLVWIYYALPVLSGVALSPIMACFLTLTLYAGAFYAEVFRGGIEAVGK 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A A+G+ QT+R IILPQ + ++ + LK+TS+ STI + ++ Sbjct: 120 GQWEAGGALGMRHAQTLRSIILPQAVRIMIPSFINQTVMQLKNTSLVSTIAVADLLYQGA 179 Query: 180 RIVSTTYQPLIIYCELAFVY 199 I + Y+PL +Y +A +Y Sbjct: 180 VITAAIYRPLEVYTVVAVIY 199 >gi|326202620|ref|ZP_08192488.1| LOW QUALITY PROTEIN: polar amino acid ABC transporter, inner membrane subunit [Clostridium papyrosolvens DSM 2782] gi|325987204|gb|EGD48032.1| LOW QUALITY PROTEIN: polar amino acid ABC transporter, inner membrane subunit [Clostridium papyrosolvens DSM 2782] Length = 221 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 65/185 (35%), Positives = 112/185 (60%), Gaps = 6/185 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY--GL 81 T+ IA ++ ++ +IIG IA+++I + ++ + Y+ RGTPLLVQ+ + FY L Sbjct: 20 TIVIAILTVILGVIIGTVIALMKIS-HNKVLKAVASSYIEFIRGTPLLVQITLFFYLISL 78 Query: 82 P--HI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 P HI G+ + F+ +I++++N AY++EIIR+ I ++ KGQ +A+ +IG T Q +R+ Sbjct: 79 PEFHIFGLELERFIPGVIAMSVNSGAYVAEIIRAGIQAVDKGQMEAARSIGFTHGQAMRY 138 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 I+LPQ + L +EF+ ++K +SV S I+I E+ + I Y+P A + Sbjct: 139 IVLPQALRNILPALGNEFVVVIKESSVLSVISISELMRNTNIIQGAIYRPFEPLAITAII 198 Query: 199 YLILT 203 Y +LT Sbjct: 199 YFLLT 203 >gi|292487347|ref|YP_003530219.1| putative ABC transporter inner membrane protein [Erwinia amylovora CFBP1430] gi|292898592|ref|YP_003537961.1| ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291198440|emb|CBJ45548.1| ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291552766|emb|CBA19811.1| putative ABC transport system, inner membrane component [Erwinia amylovora CFBP1430] Length = 221 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 62/191 (32%), Positives = 107/191 (56%), Gaps = 2/191 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 +PQL+ + + T+ + ++ V + +G A +R T+ S + YV + R TP +V Sbjct: 14 WPQLI-SGLWATIQLTVMATVGGVALGMVGAALR-SGKPTLASRLWGVYVELIRNTPFVV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I +GLP++G+ + A ++++ +N AY +EIIR+ I PKGQW+A+ +GLTR Sbjct: 72 QLFFIVFGLPNLGLKLTAGEAALLAMLINLGAYSTEIIRAGIRVTPKGQWEAARVLGLTR 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +QT ++LP + L S+ I ++ +SV S ++ E+ A I S T+ +Y Sbjct: 132 QQTFIRVVLPPAMKRIYPALVSQCIIVMLGSSVVSQVSFEELTFAANLIQSRTFLSFEVY 191 Query: 193 CELAFVYLILT 203 +YL L+ Sbjct: 192 LVTTLLYLALS 202 >gi|257066001|ref|YP_003152257.1| polar amino acid ABC transporter, inner membrane subunit [Anaerococcus prevotii DSM 20548] gi|256797881|gb|ACV28536.1| polar amino acid ABC transporter, inner membrane subunit [Anaerococcus prevotii DSM 20548] Length = 490 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 113/209 (54%), Gaps = 18/209 (8%) Query: 9 IIDSFP-QLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSD----------TII 54 IID+ + L + +T + + ++S I+G IA++R I D TII Sbjct: 267 IIDNGSYKYLLDGLKITAKVTVCALILSFILGLIIALVRSAKIDIGDELSGFPKFLLTII 326 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI-IISLTLNFSAYISEIIRSS 113 I +V I RGTP +QL ++F I + D+ V + IIS LN SAY++E+ R Sbjct: 327 DKIFALFVSIIRGTPSTIQLLIMFN---VILVNLDNLVLVAIISFALNSSAYMAELFRGG 383 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I S+ KG+ +A+ ++GL+ Q ++ +++PQ + S L +E I++ K TS+A I + + Sbjct: 384 INSVSKGEKEAARSLGLSNLQMMKKVVMPQAVKNSLPALGNEVITLFKETSIAGFIGLAD 443 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + + A ++S T+ Y A +YL++ Sbjct: 444 LTRGASIVISQTFDAATAYFSAAIIYLVI 472 >gi|57237768|ref|YP_179016.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter jejuni RM1221] gi|57166572|gb|AAW35351.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni RM1221] gi|315058379|gb|ADT72708.1| Putative glutamine transport system permease [Campylobacter jejuni subsp. jejuni S3] Length = 261 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 67/196 (34%), Positives = 114/196 (58%), Gaps = 5/196 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRG 67 I ++ + + TL I+ S ++S+I+G V F +I+ L + FY+ + RG Sbjct: 53 IATYKEKFLQGFLNTLIISFFSLLLSIILG---GVFCAFSLSSIVFLRFLSTFYIELIRG 109 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLLVQ+ +I+Y + + + + +VA +I L+ +AY++EI R+ I+SI Q +++ A Sbjct: 110 TPLLVQVLLIYYIIANNLGLDNRYVAGVIILSCFSAAYLAEIFRAGILSISISQLESARA 169 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL Q ++I PQ + PLS +F +++K +S+ S I + E+ Q+AQ I S T+ Sbjct: 170 LGLKEMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQSAQEINSYTFA 229 Query: 188 PLIIYCELAFVYLILT 203 L Y LA YL+LT Sbjct: 230 TLEAYVILAITYLVLT 245 >gi|323496903|ref|ZP_08101931.1| ABC-type amino acid transport system permease component [Vibrio sinaloensis DSM 21326] gi|323317977|gb|EGA70960.1| ABC-type amino acid transport system permease component [Vibrio sinaloensis DSM 21326] Length = 246 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 115/209 (55%), Gaps = 9/209 (4%) Query: 2 KYEWFNLIIDSFPQ-------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII 54 Y+W ++D + L A T+ ++ +S + ++ +G IA++ + S + Sbjct: 19 DYQWGWYVLDPSTEQGLTNIKFLLAGFNDTIQVSLLSMLFAMTLGLVIALLALAKS-PFL 77 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 L+ YV + R P+LV L ++YG+P + + + F A +I+LT+ SA+++E+ R Sbjct: 78 QLLNRIYVEVIRSIPVLVLLLWVYYGMPTLLDVSLNHFWAGVIALTVAESAFMAEVFRGG 137 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I +I +GQ +A+ ++GL Q +R +ILPQ PL ++F+ ILK +S+ S I + + Sbjct: 138 IQAISRGQHEAAESLGLNYWQKMRLVILPQAFRHILPPLGNQFVYILKMSSLVSVIGLSD 197 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + + A +V Y PL IY L YL+L Sbjct: 198 LTRRANELVVNEYLPLEIYTFLVVEYLVL 226 >gi|304407617|ref|ZP_07389269.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] gi|304343568|gb|EFM09410.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] Length = 261 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 120/211 (56%), Gaps = 8/211 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L ++ VTL I S I ++G +A+ +++ ++ + YV FRGTP+L+QLF+ Sbjct: 18 LLPSLKVTLLIVASSIGIGALVGLLVALPQLY-RVPMLRRLSQLYVSFFRGTPILIQLFL 76 Query: 77 IFYGLPHI--GIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +YG+P + + D + +I++ +L+ AYISE+IR +++++ +GQ +A+YA+G Sbjct: 77 FYYGVPEVLKAVQLDVTRTPALFFVILTYSLHSGAYISEVIRGAVMAVDRGQAEAAYAVG 136 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 + Q I+LPQ I+ S + I+ LK TS+A T+ I +I A+ I + + + + Sbjct: 137 MNGFQAFSRIVLPQAISLSIPVFGNVVIANLKDTSLAFTLGILDISGKAKTIGTLSQRFI 196 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y LA +Y I++ + ++E + +H Sbjct: 197 ETYLSLAVLYFIISFALQKLFDRLEKRMLRH 227 >gi|222148129|ref|YP_002549086.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] gi|221735117|gb|ACM36080.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] Length = 219 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 87/143 (60%), Gaps = 3/143 (2%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 F+GTPLL+QLF+ F+GL GI +++A ++LT +A+++EI R + ++PKGQW+A Sbjct: 60 FQGTPLLMQLFIAFFGLGLFGIDVPAWLAAGVALTCWTAAFLTEIWRGCVEAVPKGQWEA 119 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++ LT +Q +R IILPQ + + P + + ++K T++ S I E+ + + + Sbjct: 120 GTSLALTYRQQMRLIILPQAMRIAIAPTAGFSVQVVKGTALTSIIGFVELSKAGTIVTNA 179 Query: 185 TYQPLIIYCELAFVYLILTSFCY 207 T+QP +Y +A Y + CY Sbjct: 180 TFQPFTVYGLVALFYF---AICY 199 >gi|332289971|ref|YP_004420823.1| glutamine ABC transporter permease protein [Gallibacterium anatis UMN179] gi|330432867|gb|AEC17926.1| glutamine ABC transporter permease protein [Gallibacterium anatis UMN179] Length = 219 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 106/184 (57%), Gaps = 3/184 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W ++++ P+ + A ++ TL +A + SLIIG AV+ ++ ++S I Y+ Sbjct: 2 DW-QYVVNAIPKFIDATLL-TLYLAGAGILFSLIIGIICAVLLVY-PVRVLSRIAKAYIE 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I R TPLL+Q+F +++G+ +GI DS IISL +Y++E R ++++ KGQ + Sbjct: 59 ISRNTPLLIQIFFLYFGVAKLGIKLDSITCAIISLAFLGGSYMAEAFRGGLLAVSKGQIE 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 ++ +IGLT Q R++I PQ + + + + ++K TS+ S I I E+ A+ I+ Sbjct: 119 SALSIGLTPFQVFRYVIFPQAFAVAIPAIGANCLFLIKETSIVSAIAITELMFLAKEIIG 178 Query: 184 TTYQ 187 Y+ Sbjct: 179 MDYK 182 >gi|253689673|ref|YP_003018863.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756251|gb|ACT14327.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 218 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 104/184 (56%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ +F+ ++ F + ++R+ + +H Y +F+GTPLL+QLF+ F+GL Sbjct: 20 TLLLSLTAFIGGALVTFPLMLLRLT-KRKWPTRFVHLYSELFQGTPLLMQLFLAFFGLAL 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 GI + A ++LTL SA++ +I S+ ++PKGQW+AS +GL QT+ +I PQ Sbjct: 79 FGIDVSPWTAAALALTLFTSAFLVDIWCGSVEALPKGQWEASRCLGLDFGQTLYRVIAPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K T++AS I E+ + + + TYQP ++ +A Y ++ Sbjct: 139 AMRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTYQPFKVFGLVALGYFLM- 197 Query: 204 SFCY 207 CY Sbjct: 198 --CY 199 >gi|301629485|ref|XP_002943870.1| PREDICTED: hypothetical protein LOC100490970 [Xenopus (Silurana) tropicalis] Length = 569 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 85/136 (62%), Gaps = 3/136 (2%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPH---IGIVFDSFVAIIISLTLNFSAYISEII 110 +S ++ Y+W+ RGTPL++Q+ I++ LP IG+ F A + + LN++AY +EI Sbjct: 47 LSACVNGYIWLMRGTPLMLQMLFIYFALPFVPVIGVRLPDFPAAVAAFALNYAAYFAEIF 106 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R+ I S+ +GQ++A+ +G+ Q +R I+LPQ + P+S+E I+++K TS+ + Sbjct: 107 RAGIQSVERGQYEAAKVLGMNYGQAMRRIVLPQMVRNILPPMSNEAITLVKDTSLIYVLA 166 Query: 171 IPEIFQTAQRIVSTTY 186 + ++ + A+ IV + Sbjct: 167 LNDLLRAARGIVQRDF 182 >gi|261823280|ref|YP_003261386.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261607293|gb|ACX89779.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 244 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 113/212 (53%), Gaps = 12/212 (5%) Query: 21 IVVTLPIACISFVISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 I+ +P+ V S+ +GFF+A+ + S ++ I YV FRGTPLLVQLF+I Sbjct: 13 IIPGIPLTLQLAVSSVFLGFFLALGLALMQLSSFAVLRSIARTYVLFFRGTPLLVQLFLI 72 Query: 78 FYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +YGL V +S + ++SL+L AY SEIIR + S+P GQ +++ A Sbjct: 73 YYGLGQFPWVRESMLWPFLREPHWCALLSLSLCTGAYASEIIRGGLQSVPVGQIESARAC 132 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+ + I+ P I + +E IS++KSTS+AS IT+ EI A R+++ TY+ Sbjct: 133 GMPSFMIFKRIVFPLAIRQALPAYGNELISMVKSTSLASIITLMEITGIAARLIAETYRA 192 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 L ++ +YL + + + E +T H Sbjct: 193 LEVFLVAGAIYLFINLILTRLLMWTEFRLTPH 224 >gi|229170389|ref|ZP_04298062.1| Amino acid ABC transproter, permease [Bacillus cereus AH621] gi|228613086|gb|EEK70238.1| Amino acid ABC transproter, permease [Bacillus cereus AH621] Length = 230 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 73/221 (33%), Positives = 121/221 (54%), Gaps = 4/221 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A IV + SLI +A RI ++ I++ I H Y+ I Sbjct: 2 FEIFMSTYPTLLKATIVTLQLTLTSLLLGSLIG-LLVAFFRIS-NNKILNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ I IVF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSI-IVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGN 178 Query: 186 YQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQHTYSVD 225 +Q L Y + YL L F Y++ + + + SV Sbjct: 179 FQQLDTYIIVGVYYLALVLLFTYLVSLLEKRLQRKENNSVQ 219 >gi|307255255|ref|ZP_07537070.1| Arginine ABC transporter permease protein artM [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259690|ref|ZP_07541413.1| Arginine ABC transporter permease protein artM [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306861804|gb|EFM93783.1| Arginine ABC transporter permease protein artM [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866230|gb|EFM98095.1| Arginine ABC transporter permease protein artM [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 227 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 119/211 (56%), Gaps = 13/211 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLF 75 A I +P + +SL+I F +AV+ F + +I ++++ Y+ +F GTPLLVQ F Sbjct: 7 AVIAQGIPTSLSLTAVSLLIAFVLAVVFTFLLSMENKLIKVMVNGYLMLFTGTPLLVQFF 66 Query: 76 VIFYGLPHIGIVFDSFVAIIIS---------LTLNFSAYISEIIRSSIISIPKGQWDASY 126 +I++G + DSF +S L LN +AY +++ ++ +IPKGQW+ Sbjct: 67 LIYHGPGQFQWIVDSFAWQFLSDAWFCAALALALNSAAYSTQLFHGAVKAIPKGQWETCA 126 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+GL+R T++ I++P + + S+E I + K TS+ASTIT+ +I A+++ T Y Sbjct: 127 ALGLSRLDTLK-ILIPYALRRALPSYSNEIILVFKGTSLASTITLLDIMGYARQLYGTEY 185 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + IY +YL++T I+ ++E+ V Sbjct: 186 DAITIYGIAGAIYLVITGIMTILLRRVEAKV 216 >gi|218677804|ref|ZP_03525701.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli CIAT 894] Length = 154 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 53/149 (35%), Positives = 93/149 (62%), Gaps = 2/149 (1%) Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLFV++YGL +G++ D++VA+ I LTL+ SAY+ EI R SI ++P+GQ +A+ A+ Sbjct: 1 PLLMQLFVVYYGLALLGLMLDAWVAVAIGLTLHASAYLGEIWRGSIEAVPRGQTEAAKAL 60 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEF-ISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 L +R +ILPQ + S +P + F + ++K TS+AS + E+ + I + +Q Sbjct: 61 SLRYVSRMRDVILPQALRIS-LPATIGFLVQLIKGTSLASIVGFTELTRAGNIISNQIFQ 119 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESS 216 PL ++ + +Y ++ I+ ++E Sbjct: 120 PLTVFGVVGILYFLMCCPLTILGARLERK 148 >gi|332285851|ref|YP_004417762.1| polar amino acid ABC transporter, inner membrane subunit [Pusillimonas sp. T7-7] gi|330429804|gb|AEC21138.1| polar amino acid ABC transporter, inner membrane subunit [Pusillimonas sp. T7-7] Length = 225 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 59/180 (32%), Positives = 102/180 (56%), Gaps = 11/180 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ +++ I S +++ +IG +A++R +T+ + Y FRGTPLLVQLF+ Sbjct: 14 LFQGFGLSVYIGLTSILLASLIGLALALMR-GTPNTLAARFSFAYSTCFRGTPLLVQLFI 72 Query: 77 IFYGLPHIGIVFDSFV----------AIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 ++YG+ +G V +S V I+++ LN AY+SE++R S+PKGQ +A+ Sbjct: 73 LYYGIGTLGFVRESPVLWWLFSDGGRCAILAIGLNSGAYVSEVLRGGFQSVPKGQIEAAQ 132 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A G++ R I+ P I + S+E + +K TS+ASTI + E+ A+R+++ Y Sbjct: 133 ACGMSALMRFRRIVFPLAIRQALPAYSNEIVLAIKGTSLASTIAVMELTGHAKRLMNQNY 192 >gi|239831829|ref|ZP_04680158.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239824096|gb|EEQ95664.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 240 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 61/205 (29%), Positives = 111/205 (54%), Gaps = 13/205 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D + + ++VT+ +A + + L +GF +AV + S+ I L + Y IFRG P Sbjct: 13 DGWGASIAWGLLVTVSLALATLPVGLALGFLVAVGKQS-SEPSIRLAANIYTTIFRGLPE 71 Query: 71 LVQLFVIFYGLP------------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 L+ LF++++G + ++F A +++L FS+Y SE+ S+ +IP Sbjct: 72 LLTLFLVYFGASLGLQRLLSLFGVEANVEINAFGAGMVALGFVFSSYSSEVFLSAFRAIP 131 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ++ YA+GL+ QT+R +ILPQ I + L++ ++ +LK TS+ S IT+ +I + Sbjct: 132 RGQYEGGYAVGLSHWQTMRKVILPQLIRIALPGLANLWLVLLKDTSLVSVITLSDILRQT 191 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT 203 T +P + + +YL+L Sbjct: 192 SIAARVTKEPFLFFGIACLLYLVLA 216 >gi|86150643|ref|ZP_01068865.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596538|ref|ZP_01099775.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 84-25] gi|205356665|ref|ZP_03223426.1| putative glutamine transport system permease [Campylobacter jejuni subsp. jejuni CG8421] gi|218562559|ref|YP_002344338.1| putative glutamine transport system permease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85838904|gb|EAQ56171.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191379|gb|EAQ95351.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 84-25] gi|112360265|emb|CAL35060.1| putative glutamine transport system permease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|205345403|gb|EDZ32045.1| putative glutamine transport system permease [Campylobacter jejuni subsp. jejuni CG8421] gi|284926173|gb|ADC28525.1| amino acid ABC transporter permease [Campylobacter jejuni subsp. jejuni IA3902] gi|315927897|gb|EFV07220.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929286|gb|EFV08498.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni 305] Length = 261 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 67/196 (34%), Positives = 114/196 (58%), Gaps = 5/196 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRG 67 I ++ + + TL I+ S ++S+I+G V F +I+ L + FY+ + RG Sbjct: 53 IATYKEKFLQGFLNTLIISFFSLLLSIILG---GVFCAFSLSSIVFLRFLSTFYIELVRG 109 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLLVQ+ +I+Y + + + + +VA +I L+ +AY++EI R+ I+SI Q +++ A Sbjct: 110 TPLLVQVLLIYYIIANNLGLDNRYVAGVIILSCFSAAYLAEIFRAGILSISISQLESARA 169 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL Q ++I PQ + PLS +F +++K +S+ S I + E+ Q+AQ I S T+ Sbjct: 170 LGLKEMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQSAQEINSYTFA 229 Query: 188 PLIIYCELAFVYLILT 203 L Y LA YL+LT Sbjct: 230 TLEAYVILAITYLVLT 245 >gi|315037375|ref|YP_004030943.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus amylovorus GRL 1112] gi|312275508|gb|ADQ58148.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus amylovorus GRL 1112] Length = 494 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 60/183 (32%), Positives = 109/183 (59%), Gaps = 7/183 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I S +I +++G +A++R+ + ++ I Y+ RGTP +VQ+ +++G+ Sbjct: 298 TLVITVFSVLIGIVLGMLLALMRLS-RNKLLHWIAVCYIEFIRGTPQMVQILFVYFGVGA 356 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + + VA II++ LN AY++E IRS I S+ KGQ +A+ ++GL++ + R++I+PQ Sbjct: 357 LISNLSAVVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLGLSQAKAYRYVIIPQ 416 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCELAFVYL 200 + L +EFI++LK +S+ S I + E+ + I ++TY+ PL I +Y Sbjct: 417 ALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGVLPLFIAM---IIYF 473 Query: 201 ILT 203 I+T Sbjct: 474 IMT 476 >gi|218548238|ref|YP_002382029.1| histidine/lysine/arginine/ornithine ABC transporter membrane protein [Escherichia fergusonii ATCC 35469] gi|218355779|emb|CAQ88392.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|323967748|gb|EGB63160.1| inner membrane transport system [Escherichia coli M863] gi|323977492|gb|EGB72578.1| inner membrane transport system [Escherichia coli TW10509] gi|324112844|gb|EGC06820.1| inner membrane transport system [Escherichia fergusonii B253] gi|327252578|gb|EGE64237.1| histidine transport system permease protein hisM [Escherichia coli STEC_7v] Length = 238 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 116/213 (54%), Gaps = 11/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + +S VI ++ F+A+ R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLILSVVIGGVLALFLAIGRVS-SNKYIQFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTEFLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I + TYQ Sbjct: 139 YGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P + A +YLI++ + K E QH Sbjct: 199 PFTAFGIAAVLYLIISYVLISLFRKAEKRWLQH 231 >gi|254303824|ref|ZP_04971182.1| amino acid ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324016|gb|EDK89266.1| amino acid ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 236 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 63/166 (37%), Positives = 99/166 (59%), Gaps = 3/166 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII--ISLTLNFSAYISEIIR 111 +S I + Y+ I RGTP++VQL +I L +G++ ++ + +I I+ LN AY++EIIR Sbjct: 68 LSKIAYIYIDIIRGTPVVVQL-MILANLIFVGVLRETPILVIGGIAFGLNSGAYVAEIIR 126 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + I + KGQ +A A+GL+ QT+R II+PQ I L SEFI++LK TS+ I Sbjct: 127 AGIEGLDKGQMEAGRALGLSYSQTMRKIIVPQAIKNILPALVSEFITLLKETSIIGFIGG 186 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 ++ ++A I S TY+ + + +YLILTS K+E + Sbjct: 187 VDLLRSASIITSQTYRGVEPLLAVGIIYLILTSIFTAFMRKVERGL 232 >gi|91763206|ref|ZP_01265170.1| ABC transporter permease component [Candidatus Pelagibacter ubique HTCC1002] gi|91717619|gb|EAS84270.1| ABC transporter permease component [Candidatus Pelagibacter ubique HTCC1002] Length = 246 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 61/153 (39%), Positives = 92/153 (60%), Gaps = 1/153 (0%) Query: 41 FIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLT 99 FI I + ++ I YV I R PLLV + I+YGLP G+ F FV+ II+L Sbjct: 63 FIVAIPSLAKNKFLTYINIGYVEIVRAIPLLVLILWIYYGLPIMTGLSFSPFVSGIIALA 122 Query: 100 LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISI 159 ++ SA+ +EI R+ I SI K QW+A ++GLT + +R +ILPQ I L ++F+ + Sbjct: 123 ISESAFQAEIFRAGINSIKKSQWEAGSSLGLTFYKRLRLVILPQAIKNILPALGNQFVYV 182 Query: 160 LKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 LK +S+ S I I ++ + A +V +TY+PL IY Sbjct: 183 LKMSSLVSIIGIGDLTRKANELVVSTYRPLEIY 215 >gi|227112258|ref|ZP_03825914.1| ABC transporter permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 221 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 117/204 (57%), Gaps = 4/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y+W F+L+ + P LL + VTL + ++ V+ +G + + R+F +SL Sbjct: 1 MHYQWDFSLVWHNLPVLL-KGLGVTLELWLLAGVLGTALGLVLGLFRVF-GKRWLSLPAR 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 +V IFR TP+L+QL +Y P +GI F +F A ++LTL +AY +EI R+ + SI Sbjct: 59 CFVEIFRNTPVLIQLIWFYYAFPVLVGIQFSTFAAAALALTLYSAAYCTEIFRAGLQSID 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQW+ + A+G+ + +R ++LPQ + L++ I + K TS+AS + + E+ Sbjct: 119 HGQWEGAKALGMRQAVILRRVVLPQVLRNMLPALTNRMIELAKVTSLASILAVNELMYQG 178 Query: 179 QRIVSTTYQPLIIYCELAFVYLIL 202 + + ST Y+PL I +A +Y +L Sbjct: 179 RLLSSTYYRPLEILTVVALLYFVL 202 >gi|78355232|ref|YP_386681.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217637|gb|ABB36986.1| amino acid ABC transporter membrane protein 1, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 222 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 112/196 (57%), Gaps = 3/196 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++++ P +L +V L +A + ++ L +G +AV +++ S + LI YVW FRG Sbjct: 8 VLEAMPYILQGGLVSLLIVAG-AMMLGLAMGIPMAVGQVYGSPFLRRLI-GLYVWFFRGV 65 Query: 69 PLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 P+LV +F+ ++G+ +G+ + A + L + +AY S+I R SI ++P GQ A+ A Sbjct: 66 PILVLMFLFYFGVFELLGLNLSAISATALVLGMTSAAYQSQIFRGSIQALPAGQLKAARA 125 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ Q IR +ILPQ + S S+E+ ILK +++A + +IF + S TY+ Sbjct: 126 MGMSDSQAIRAVILPQALRLSLPGWSNEYSIILKDSALAYVVGAMDIFTRTHFVASRTYE 185 Query: 188 PLIIYCELAFVYLILT 203 L ++ +Y ++T Sbjct: 186 HLPLFIAAGALYFVIT 201 >gi|288962582|ref|YP_003452877.1| polar amino acid transport system permease protein [Azospirillum sp. B510] gi|288914848|dbj|BAI76333.1| polar amino acid transport system permease protein [Azospirillum sp. B510] Length = 224 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 61/193 (31%), Positives = 108/193 (55%), Gaps = 3/193 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F+ ++D P +L +V T+ + +S V+ + +G A R + + ++++ Sbjct: 1 MAYSFDFSSLLDYTP-VLVDGVVTTVALTAVSTVLGVALGIGGAAARTSTAKPL-AILVG 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TP LVQLF IF+GLP +GI + A ++++ +N AY +EIIR+ I + PK Sbjct: 59 AYVELIRNTPFLVQLFFIFFGLPSLGIRLAEWQAAVLAMVINLGAYSTEIIRAGIEATPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A +G+T Q R+++L + L+S+ + ++ +SV S I E+ A Sbjct: 119 GQIEAGAGLGMTGPQIFRYVVLGPAMGKIWPALTSQIVIVMLGSSVCSQIAAEELSFAAN 178 Query: 180 RIVSTTYQPLIIY 192 I S ++P +Y Sbjct: 179 FIQSRNFRPFEVY 191 >gi|260912991|ref|ZP_05919476.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Pasteurella dagmatis ATCC 43325] gi|260632981|gb|EEX51147.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Pasteurella dagmatis ATCC 43325] Length = 227 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 57/177 (32%), Positives = 103/177 (58%), Gaps = 10/177 (5%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTL 100 + +++ ++ Y+ +F GTPLLVQ F+I+ G ++ S V +++L L Sbjct: 41 GNKVVNCGINTYLTLFTGTPLLVQFFLIYAGPGQFDVIVQSPVWSLLSNAWFCAMLTLAL 100 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N +AY +++ ++ +I KGQW++ ++GLTR QT++ I++P + + S+E I + Sbjct: 101 NSAAYTTQLFHGAVKAISKGQWESCASLGLTRLQTLK-ILIPYALKRALPSYSNEIILVF 159 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 K T++ASTITI +I A+++ T Y L IY +YL++T ++ K+ES V Sbjct: 160 KGTALASTITIMDIMGYARQLYGTEYDALTIYGIAGAIYLVITGIATVLLRKLESRV 216 >gi|260771024|ref|ZP_05879952.1| putative amino acid ABC transporter permease protein [Vibrio furnissii CIP 102972] gi|260613913|gb|EEX39104.1| putative amino acid ABC transporter permease protein [Vibrio furnissii CIP 102972] Length = 186 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 7/146 (4%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFD----SFVAIIISLTLNFSAYISEIIRSSIIS 116 YV + R PLLV L I+YGLP ++FD F A +++L+L SA+++E+ R I + Sbjct: 25 YVEVVRAIPLLVLLLWIYYGLP---VLFDLSLNHFTAGVMALSLAESAFMAEVFRGGIQA 81 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ +A+ A+GL Q +R +ILPQ + PL ++FI ILK +S+ S I + ++ + Sbjct: 82 IDRGQHEAAQALGLRDWQKMRLVILPQALRHILPPLGNQFIYILKMSSLVSVIGLSDLTR 141 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLIL 202 A +V T Y PL IY L YLIL Sbjct: 142 RANELVVTEYLPLEIYTFLVLEYLIL 167 >gi|110633916|ref|YP_674124.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110284900|gb|ABG62959.1| amino acid ABC transporter membrane protein 1, PAAT family [Chelativorans sp. BNC1] Length = 237 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 118/213 (55%), Gaps = 17/213 (7%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++VT+ +A ++ L GF +A+ + + + L + Y IFRG P L+ LF++FY Sbjct: 22 GVLVTISLALVTLPFGLAAGFTVALAKTS-EEPSLRLAANIYTTIFRGLPELLTLFLVFY 80 Query: 80 GL------------PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 G I ++FVA I++L FSAY SE+ S+ +IP+GQ++ +YA Sbjct: 81 GAQIAVQQITRVLGATATIEINAFVAGIVALGAVFSAYASEVFVSAFRAIPRGQYEGAYA 140 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT---AQRIVST 184 +GL+R++T++ +ILPQ I + LS+ ++ +LK TS+ S I + +I + A R+ Sbjct: 141 VGLSRRRTMQLVILPQLIRLALPGLSNLWLILLKETSLVSVIGLADILRQTGIAARVSKE 200 Query: 185 TYQPLIIYCELAFVYLILTSFCY-IIQIKIESS 216 + I C L +L+SF + I+ ++ SS Sbjct: 201 AFLFFGIACLLYLGLSVLSSFAFSAIERRVSSS 233 >gi|261867469|ref|YP_003255391.1| arginine transporter permease subunit ArtM [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412801|gb|ACX82172.1| arginine transport system permease protein [Aggregatibacter actinomycetemcomitans D11S-1] Length = 227 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 118/209 (56%), Gaps = 13/209 (6%) Query: 21 IVVTLPIACISFVISLIIGFFIAVIRIF---FSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 I +P + + V+SL I FF+A++ + + ++ Y+ +F GTPLLVQ F+I Sbjct: 9 IAQGIPTSLLLTVVSLAIAFFLALVLTVLLTMGNKAVKSAVNLYLTLFTGTPLLVQFFLI 68 Query: 78 FYG---------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 + G P ++ +++ ++L LN SAY +++ ++ +IPK QW++ A+ Sbjct: 69 YAGPGQFQWIVNSPLWSVLSNAWFCAALTLALNSSAYSTQLFHGAVKAIPKVQWESCEAL 128 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+R QT++ I++P + + S+E I + K T++ASTITI +I A+++ T Y Sbjct: 129 GLSRLQTLK-ILIPYALKRALPSYSNEIILVFKGTALASTITIMDIMGYARQLYGTDYDA 187 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSV 217 L IY +YLI+T ++ ++E+ V Sbjct: 188 LTIYGIAGGIYLIITGIATLLLRRLENKV 216 >gi|238854963|ref|ZP_04645293.1| glutamine ABC transporter, permease/substrate-binding protein [Lactobacillus jensenii 269-3] gi|260664248|ref|ZP_05865101.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus jensenii SJ-7A-US] gi|282931674|ref|ZP_06337167.1| probable amino-acid ABC transporter permease protein [Lactobacillus jensenii 208-1] gi|313472443|ref|ZP_07812935.1| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus jensenii 1153] gi|238832753|gb|EEQ25060.1| glutamine ABC transporter, permease/substrate-binding protein [Lactobacillus jensenii 269-3] gi|260562134|gb|EEX28103.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus jensenii SJ-7A-US] gi|281304285|gb|EFA96394.1| probable amino-acid ABC transporter permease protein [Lactobacillus jensenii 208-1] gi|313449147|gb|EEQ69141.2| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus jensenii 1153] Length = 220 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 62/174 (35%), Positives = 103/174 (59%), Gaps = 3/174 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L ++VT+ ++ IS V+S IIG + IR + IS ++ + I R PLL+ + Sbjct: 14 RFLLEGLLVTVEVSIISIVLSYIIGLILGTIR-YMKIKYISAVVGLIIDIIRNLPLLLII 72 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F ++G P +GI F A I +L + SA ++EI+R I ++P+GQ + + + G+T Q Sbjct: 73 FFTYFGFPELGIHATPFWAAISALVIFESAMLAEIVRGGIKAVPEGQMEGARSNGMTYLQ 132 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTY 186 + H+I+PQ + L S+F+S++K TS+A+ I +PE+ AQ I S TTY Sbjct: 133 AMCHVIMPQAMHMMMPALLSQFVSLVKDTSLATIIILPELLYHAQIIYSQNTTY 186 >gi|330966765|gb|EGH67025.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 232 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 113/207 (54%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N+I DS P L + +++T + IS L+ + ++R+ + +++ Y ++ Sbjct: 5 YNVIWDSLP-LYFGGLLMTFKLLAISLTFGLLAALPLGLMRVS-KNPWVNMPAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +SF ++ +N SAY +EII S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFSAVRESFFWPWLSSATFCACLAFAINTSAYTAEIIAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G+++ + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + Y P Y YL LT Sbjct: 183 AARTVNAQFYLPFEAYVTAGVFYLCLT 209 >gi|313905462|ref|ZP_07838826.1| polar amino acid ABC transporter, inner membrane subunit [Eubacterium cellulosolvens 6] gi|313469646|gb|EFR64984.1| polar amino acid ABC transporter, inner membrane subunit [Eubacterium cellulosolvens 6] Length = 218 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 52/129 (40%), Positives = 81/129 (62%), Gaps = 9/129 (6%) Query: 59 HFYVWIFRGTPLLVQLFVIFYG---LPH-----IGIVFDSFVAIIISLTLNFSAYISEII 110 F +W+ RGTPL++QL+VIFYG L H +G+ F+A +++ +N+S Y SEI Sbjct: 50 KFLIWVIRGTPLMLQLYVIFYGPGLLGHPVWNGLGLS-GRFIAALVAFVINYSCYFSEIY 108 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R I SIP GQ++A +G+T+ Q R ++L Q I P+S+E I+++K TS+A+ I+ Sbjct: 109 RGGIQSIPVGQYEAGQVLGMTKGQIFREVVLLQVIKRIVPPMSNEIITLVKDTSLANVIS 168 Query: 171 IPEIFQTAQ 179 + EI T Sbjct: 169 VAEIIFTGN 177 >gi|295398549|ref|ZP_06808582.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Aerococcus viridans ATCC 11563] gi|294973213|gb|EFG49007.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Aerococcus viridans ATCC 11563] Length = 217 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 59/212 (27%), Positives = 120/212 (56%), Gaps = 1/212 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ ++ L+ + TL + I+ + SLI+G + + + + +++ I YV FR Sbjct: 4 LLTNYSDLIIEGFINTLIASVIALIASLILGGLVGIFQTL-DNKVLAKIGDIYVEFFRNI 62 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+ + + +P G+ F + II LTL SA+I++++RS I ++P+GQ +A+ + Sbjct: 63 PLLIIVMFFYVVIPLYGMDITGFQSGIIGLTLYTSAFIADVVRSGIDAVPEGQKEAAISQ 122 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+T QT+++++LPQ + PL ++FI+++K++S+ + + ++ I S T+ Sbjct: 123 GMTYVQTMQYVVLPQAVKIVIPPLGNQFINLVKNSSILAMVAGLDLMYYGDLIASETFNT 182 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 L Y +A +YL++T ++ IE + Q Sbjct: 183 LGTYTMIAGMYLVITVPLTLLVSYIEKRLAQQ 214 >gi|191638338|ref|YP_001987504.1| Glutamine ABC transporter, substrate binding and permease protein [Lactobacillus casei BL23] gi|227535173|ref|ZP_03965222.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631577|ref|ZP_04674608.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|190712640|emb|CAQ66646.1| Glutamine ABC transporter, substrate binding and permease protein [Lactobacillus casei BL23] gi|227187218|gb|EEI67285.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239526042|gb|EEQ65043.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|327382365|gb|AEA53841.1| Amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus casei LC2W] gi|327385566|gb|AEA57040.1| Amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus casei BD-II] Length = 485 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 63/180 (35%), Positives = 110/180 (61%), Gaps = 9/180 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ I +++G A++R+ + + LI Y+ RGTPL++Q+ +++G Sbjct: 290 TLLISAIGAFFGVLLGTIFALLRLS-KNKLSHLIGVSYIEFVRGTPLMIQVMFVYFG--- 345 Query: 84 IGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IGI D + +A +I+++LN +AY++EIIRS I SIP GQ +A+ ++GL+ +QT+ ++L Sbjct: 346 IGIFIDIPALIAGLIAVSLNSAAYVAEIIRSGIDSIPVGQTEAARSLGLSERQTMISVVL 405 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY---QPLIIYCELAFV 198 PQ I L +EFIS++K +S+ S I + ++ + + TY QP+++ L FV Sbjct: 406 PQAIKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLTVVQTATYKGVQPILVAMVLYFV 465 >gi|253687971|ref|YP_003017161.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754549|gb|ACT12625.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 219 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 96/159 (60%), Gaps = 2/159 (1%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ I RGTP++VQ+ I++ LP I + D F A ++++ +N AYI+EI R S++SI Sbjct: 58 FIEIIRGTPIVVQVMFIYFALPMIFTSVRIDPFAAAVVTIMINSGAYIAEITRGSVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 G +A A+GL+R+ T+RH+I P + PL +++I +K TS+ I + E+ ++ Sbjct: 118 NGFREAGLALGLSRRATLRHVIAPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRSG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 Q I++ ++ L I+ +A +YL +T I ++E + Sbjct: 178 QEIIAGNFRALEIWTAVAIIYLCITLILSFILRRLERRL 216 >gi|239835031|ref|ZP_04683359.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239823094|gb|EEQ94663.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 220 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 65/199 (32%), Positives = 110/199 (55%), Gaps = 3/199 (1%) Query: 7 NLIID--SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 N ++D F +L + TL + S V+S ++G A++R+ +S + V + Sbjct: 3 NFLMDIREFFPILLEGVKYTLLVTLGSLVLSTLLGLVWALMRVS-GIGWLSAVAGAIVNV 61 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RG P+LVQLF I++ LP GI + A II L + +SAY +E R+ I +I GQ +A Sbjct: 62 IRGIPILVQLFYIYFVLPEFGIALSALQAGIIGLGIAYSAYQAENFRAGIEAIDHGQTEA 121 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + +IG+ T+R +ILPQ + P + + +LK +S AS IT+ E+ Q + ++ Sbjct: 122 AQSIGMGWFMTMRRVILPQAVRVILPPYGNIMVMLLKDSSQASAITVAELTLQGQLLAAS 181 Query: 185 TYQPLIIYCELAFVYLILT 203 T++ + +Y +A YL L+ Sbjct: 182 TFKNMSVYTLVAMFYLCLS 200 >gi|154174248|ref|YP_001407878.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter curvus 525.92] gi|112803416|gb|EAU00760.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter curvus 525.92] Length = 236 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 108/197 (54%), Gaps = 12/197 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + I + +GF +A ++ F + I+S I+ Y+ I RGTP+++QL + + + Sbjct: 42 VTLGLTLGGICIGIALGFLLAFLK-FLNIKILSFIIDEYIDILRGTPIILQLLI--FSVV 98 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 D+F +I+L LN SAY++EI+RS I S+ KGQ +A+ A+GL+ ++R II P Sbjct: 99 IFATWSDNFYVAVIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGLSYSASMREIIFP 158 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q I L +EFIS+ K TSV I++ +I ++ + Y P + I Sbjct: 159 QAIKNILPALGNEFISLFKETSVVGYISVMDITFQSKSFQAILYNPKPV---------IF 209 Query: 203 TSFCYIIQIKIESSVTQ 219 Y I +KI S +T+ Sbjct: 210 AGVVYYISVKILSFLTK 226 >gi|167770581|ref|ZP_02442634.1| hypothetical protein ANACOL_01927 [Anaerotruncus colihominis DSM 17241] gi|167667176|gb|EDS11306.1| hypothetical protein ANACOL_01927 [Anaerotruncus colihominis DSM 17241] Length = 218 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 115/191 (60%), Gaps = 18/191 (9%) Query: 26 PIACISFVI---SLIIGFFIAVI-RIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 P+ + FV+ S+ +GF + ++ R F+ + I++ Y+++ RGTPL++QLF I+YGL Sbjct: 19 PVLILFFVVMAASMPLGFLLTLVARCRFAP--LRWIVNAYIYVMRGTPLMLQLFFIYYGL 76 Query: 82 PHIGIVFDS-----FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 P + F + V ++ +LN++AY +EI R +++I +GQ++A +GL+R QT Sbjct: 77 PFVSDFFKAALQSAMVCALLGFSLNYAAYFAEIFRGGLLAIDRGQYEACQVLGLSRVQTT 136 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCE 194 +ILPQ I + +++E I+++K T++ +I + EI A+ V+ T P +I Sbjct: 137 VRVILPQMIRVALPSITNESITLIKDTALVFSIAVLEILYYAKAAVTRTGNVFPYVI--- 193 Query: 195 LAFV-YLILTS 204 AFV YL+L + Sbjct: 194 -AFVIYLLLNT 203 >gi|301066392|ref|YP_003788415.1| amino acid ABC transporter permease/periplasmic protein [Lactobacillus casei str. Zhang] gi|300438799|gb|ADK18565.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus casei str. Zhang] Length = 485 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 63/180 (35%), Positives = 110/180 (61%), Gaps = 9/180 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ I +++G A++R+ + + LI Y+ RGTPL++Q+ +++G Sbjct: 290 TLLISAIGAFFGVLLGTIFALLRLS-KNKLSHLIGVSYIEFVRGTPLMIQVMFVYFG--- 345 Query: 84 IGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IGI D + +A +I+++LN +AY++EIIRS I SIP GQ +A+ ++GL+ +QT+ ++L Sbjct: 346 IGIFIDIPALIAGLIAVSLNSAAYVAEIIRSGIDSIPVGQTEAARSLGLSERQTMISVVL 405 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY---QPLIIYCELAFV 198 PQ I L +EFIS++K +S+ S I + ++ + + TY QP+++ L FV Sbjct: 406 PQAIKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLTVVQTATYKGVQPILVAMVLYFV 465 >gi|254854300|ref|ZP_05243648.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503] gi|258607692|gb|EEW20300.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503] Length = 238 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 124/227 (54%), Gaps = 15/227 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +I D P L + +TL I +S + I+G +++ RI+ ++ + Y+ FR Sbjct: 8 KMIADFIPTLA-GYLPITLYILALSLIFGFILGVLLSLPRIY-KIPVLDQLARVYISFFR 65 Query: 67 GTPLLVQLFVIFYGLPH----IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 GTP++VQLF++FYG+P +GI D A I + L+ +A I+E+IR+ + S+ Sbjct: 66 GTPIMVQLFIVFYGIPALSSIVGIDLSQMDPLYAAIATYALSSAATIAEVIRAGVNSVDA 125 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+Y+IGL+ QT IILPQ + + + I LK TS+A +I + ++ Q Sbjct: 126 GQAEAAYSIGLSSHQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQ 185 Query: 180 RIVSTTYQPLIIYCELAFVY-----LILTSFCYIIQIKIESSVTQHT 221 +++ + L +Y L+ +Y L+ SF + I+ +++ T+ T Sbjct: 186 TLITLSNHALEVYISLSIIYYLTAVLLEYSFKW-IEKRVKKENTRFT 231 >gi|224824086|ref|ZP_03697194.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] gi|224603505|gb|EEG09680.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] Length = 247 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 72/233 (30%), Positives = 123/233 (52%), Gaps = 35/233 (15%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS-LIMH 59 M + W +I + P + A +TL I ++ + +IG F+ V R+ IS +++ Sbjct: 1 MNFRW-EMITEYLPLFIDGA-KMTLLITIVAVIFGTLIGLFMGVARLAEGKHGISKIVLR 58 Query: 60 F--------YVWIFRGTPLLVQLFVIFYGL------PHIGIV------------FDSFVA 93 + YV FRGTPL VQ+ ++ + L P GI+ + +F++ Sbjct: 59 YLVRLPATAYVTFFRGTPLFVQILLVHFALMPMLIHPVDGIILSGDIAREIRQNYGAFIS 118 Query: 94 IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS 153 +++LTLN AYI+EI R+ I SI KGQ +A+ ++GL+ Q ++ +I+PQ PL Sbjct: 119 GLLALTLNAGAYITEIFRAGIQSIDKGQMEAARSLGLSYGQAMKAVIVPQAFRRMLPPLG 178 Query: 154 SEFISILKSTSVASTITIPEI---FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +E I +LK +S+ S I + E+ +T + S ++P Y ++F+YL LT Sbjct: 179 NEAIMLLKDSSLVSAIGLAELAFAARTVAGVYSRYWEP---YLTISFLYLALT 228 >gi|254250402|ref|ZP_04943721.1| amino acid ABC transporter permease protein [Burkholderia cenocepacia PC184] gi|124879536|gb|EAY66892.1| amino acid ABC transporter permease protein [Burkholderia cenocepacia PC184] Length = 248 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 99/169 (58%), Gaps = 9/169 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIR 111 Y+ +FRG+PLL+Q+F+++YGL G++ +SF V ++SL L + Y +EI+R Sbjct: 58 YILVFRGSPLLIQMFLVYYGLGQFGVIRESFMWPLLREPYVCAVLSLALCTAGYTAEILR 117 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++++P GQ +A Y+IGL+ +R +I P + S+E + ++KST++AS +T+ Sbjct: 118 GGLMAVPVGQIEAGYSIGLSGFSLLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTV 177 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E+ AQ+I+ TY+ ++ A +YL L + +E ++ H Sbjct: 178 WEVTGVAQQIIQQTYRTTEVFVCAAIIYLGLNFIVVRVLGALEWRLSGH 226 >gi|304394878|ref|ZP_07376762.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304357131|gb|EFM21494.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 228 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 58/158 (36%), Positives = 95/158 (60%), Gaps = 9/158 (5%) Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAY 105 S FYVW+FRGTPLL+Q+F+++YGL + V DS + +++L LN +AY Sbjct: 48 SFFCRFYVWLFRGTPLLIQIFMVYYGLGSLPAVRDSLFWPLLRDPYWCGLLALILNDAAY 107 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 SEI+R + ++ + +A+ G++ + I LP I + S+E IS++K+TS+ Sbjct: 108 TSEILRGGLRAVSQQSLEAAKVSGMSSYKIFTRITLPIAIRQALPAYSNEIISMIKATSL 167 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 STI++ E+ A IVS+T++ L ++ A +YLILT Sbjct: 168 VSTISLMEMTGIADSIVSSTFRALEVFLSAAVIYLILT 205 >gi|218284064|ref|ZP_03489892.1| hypothetical protein EUBIFOR_02495 [Eubacterium biforme DSM 3989] gi|218215386|gb|EEC88924.1| hypothetical protein EUBIFOR_02495 [Eubacterium biforme DSM 3989] Length = 227 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 61/165 (36%), Positives = 93/165 (56%), Gaps = 7/165 (4%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVF-------DSFVAIIISLTLNFSAYISEIIRSS 113 YV I RGTPLL+Q+ +IF +P I F + V +I+L++N AY +E++RS Sbjct: 60 YVTIIRGTPLLLQILIIFSVIPSIYTAFTGNVLRINPIVIGMIALSINSGAYQTELLRSG 119 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I + KGQW+A +GL+ +T++ +ILPQ PL SEFI+++K +S+ S I E Sbjct: 120 INGVDKGQWEACETLGLSNWKTMKLVILPQAFKRVVPPLISEFITLIKDSSLISCIGAVE 179 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 + + AQ I + Y + Y A YLI+T I K+E + Sbjct: 180 LLKGAQVIGAEYYDVMSPYMLAAIFYLIMTCIVSCIGNKVEKRLA 224 >gi|20089671|ref|NP_615746.1| glutamine ABC transporter, permease protein [Methanosarcina acetivorans C2A] gi|19914598|gb|AAM04226.1| glutamine ABC transporter, permease protein [Methanosarcina acetivorans C2A] Length = 213 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 91/149 (61%), Gaps = 6/149 (4%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH--IGIVFDSF-VAIIIS---LTLNFSAYISEIIRSSI 114 Y+ RGTPL VQ+ + +Y +P IGI D F V I++ ++N AY +EIIR+ I Sbjct: 44 YIDFIRGTPLFVQILLFYYSIPGLIIGITGDPFRVDPILAGAVCSINSGAYNAEIIRAGI 103 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+ +GQ +A+ ++G+T Q ++ +++PQ + PL +EFI++LK +S+ + I++ E+ Sbjct: 104 KSVDRGQMEAARSLGMTEGQAMKEVVMPQAVRLIIPPLGNEFIALLKDSSLLAIISVHEL 163 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + VS T+ Y +AFVYL LT Sbjct: 164 AKNGMLYVSKTFAAFPTYISVAFVYLALT 192 >gi|147669042|ref|YP_001213860.1| polar amino acid ABC transporter, inner membrane subunit [Dehalococcoides sp. BAV1] gi|146269990|gb|ABQ16982.1| amino acid ABC transporter membrane protein, PAAT family [Dehalococcoides sp. BAV1] Length = 273 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 91/161 (56%), Gaps = 14/161 (8%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP----------HIGIVFD----SFVAII 95 +T+I I FYV I RG PLLVQL ++ P + G + + V I Sbjct: 88 QNTLIRGIATFYVEIVRGIPLLVQLIWWYFAFPVIIQTIGQALNFGPMLNYQANPIVMAI 147 Query: 96 ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSE 155 +T + AY+SEI R+ I SIPKGQ +A+ ++G++ Q +R IILPQ + P+ +E Sbjct: 148 WGMTFCYGAYMSEIYRAGIQSIPKGQMEAARSLGMSHTQAMRFIILPQALRVILPPMGNE 207 Query: 156 FISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 FIS+LK TS+ ST+ + ++ + + +T + P+ ++ +A Sbjct: 208 FISLLKDTSLVSTVAVADMVRLGREFTATNFNPIEVWSMIA 248 >gi|330812508|ref|YP_004356970.1| ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380616|gb|AEA71966.1| putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 226 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 109/203 (53%), Gaps = 1/203 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y++ L + +LL + TL + I ++ + +G AV+R + + + I Sbjct: 1 MAYQFDFLPVVQNTELLLRGALFTLELTAIGTLLGVSLGIVGAVVRAW-NIRPFAAIFGV 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TP LVQLF IF+GLP +G+ + A ++++ +N AY +EIIR+ I +IP+G Sbjct: 60 YVELIRNTPFLVQLFFIFFGLPSLGLQISEWQAAVLAMVINLGAYSTEIIRAGIQAIPRG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+ ++R + RH++L + LSS+ I ++ ++V S I E+ A Sbjct: 120 QLEAAAALAMSRFEAFRHVVLLPALGKVWPALSSQIIIVMLGSAVCSQIATEELSFAANF 179 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I S ++ Y +YL + Sbjct: 180 IQSRNFRAFETYALTTLIYLCMA 202 >gi|157376893|ref|YP_001475493.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella sediminis HAW-EB3] gi|157319267|gb|ABV38365.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella sediminis HAW-EB3] Length = 226 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 95/162 (58%), Gaps = 3/162 (1%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 +FYV I RGTP++VQL VI Y + D A II+ LN AYISEIIR+ I ++ Sbjct: 65 NFYVGIIRGTPVVVQL-VILYFIVLAAFDIDKITAAIIAFGLNSGAYISEIIRAGIQAVD 123 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A+ ++GL+ T++ +ILPQ I L +EFI +LK T+V I ++ + Sbjct: 124 KGQMEAARSLGLSHGATMKEVILPQAIKNILPSLGNEFIVLLKETAVIGFIGGVDLMRAG 183 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQ 219 + I S T++ + A +YL+LT SF ++ K E+ + Q Sbjct: 184 EIIRSRTFEDSVPLFTCALIYLLLTYSFTLLLS-KFETRLKQ 224 >gi|239833798|ref|ZP_04682126.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239821861|gb|EEQ93430.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 218 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 125/211 (59%), Gaps = 5/211 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I+ + +LL + TL IA S ++S G A++ + + + ++ + F++W+F GT Sbjct: 7 IVPPYTELLMTGVWWTLIIAVSSSIVSFFGGIAFALL-VLYGNWLVRYPVRFFIWLFMGT 65 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF+++YGL IGI + +I L L+F+ Y S++ R++I+++ GQ + + ++ Sbjct: 66 PLLLQLFLLYYGLSQIGINIPAVWTGVIGLGLHFAVYNSDLFRTAILTVDPGQNEGARSL 125 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G QT+R+II+PQ + + + + I++LK T++ S I I E+ +Q+ +S TY P Sbjct: 126 GFGSGQTLRYIIVPQAVRNALPQVGNNLIALLKDTALVSVIGITELVHASQQAISETYSP 185 Query: 189 LIIYCELAFVY----LILTSFCYIIQIKIES 215 Y A ++ LIL + + ++ K+E+ Sbjct: 186 FEFYITAAVIFYVLNLILEAGLHWMEKKVEA 216 >gi|170735091|ref|YP_001774205.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169821129|gb|ACA95710.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 248 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 99/169 (58%), Gaps = 9/169 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIR 111 Y+ +FRG+PLL+Q+F+++YGL G++ +SF V ++SL L + Y +EI+R Sbjct: 58 YILVFRGSPLLIQMFLVYYGLGQFGVIRESFMWPLLREPYVCAVLSLALCTAGYTAEILR 117 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++++P GQ +A Y+IGL+ +R +I P + S+E + ++KST++AS +T+ Sbjct: 118 GGLMAVPVGQIEAGYSIGLSGFSLLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTV 177 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E+ AQ+I+ TY+ ++ A +YL L + +E ++ H Sbjct: 178 WEVTGVAQQIIQQTYRTTEVFVCAAIIYLGLNFIVVRVLGALEWRLSGH 226 >gi|107028495|ref|YP_625590.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116686491|ref|YP_839738.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|105897659|gb|ABF80617.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia cenocepacia AU 1054] gi|116652206|gb|ABK12845.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia cenocepacia HI2424] Length = 248 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 99/169 (58%), Gaps = 9/169 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIR 111 Y+ +FRG+PLL+Q+F+++YGL G++ +SF V ++SL L + Y +EI+R Sbjct: 58 YILVFRGSPLLIQMFLVYYGLGQFGVIRESFMWPLLREPYVCAVLSLALCTAGYTAEILR 117 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++++P GQ +A Y+IGL+ +R +I P + S+E + ++KST++AS +T+ Sbjct: 118 GGLMAVPVGQIEAGYSIGLSGFSLLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTV 177 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E+ AQ+I+ TY+ ++ A +YL L + +E ++ H Sbjct: 178 WEVTGVAQQIIQQTYRTTEVFVCAAIIYLGLNFIVVRVLGALEWRLSGH 226 >gi|158424907|ref|YP_001526199.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158331796|dbj|BAF89281.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 227 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 118/205 (57%), Gaps = 5/205 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT--IISLIM 58 M Y++ ++ F + + +TL ++ IS V+ I+G A+ R +D + ++ Sbjct: 1 MTYQFDFAVLLPFWREFAMGVWLTLQLSLISTVLGFILGTLCAIGR---ADGPPWVKFLV 57 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV I R TPLLVQ+F++++G+ +GI + +A +++L +N AY SEI+R+ + SI Sbjct: 58 ATYVEIIRNTPLLVQVFIVYFGIATLGIHVSANLAAVLALVVNVGAYTSEIVRAGLESIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 K Q +A+ +GL+R QT H+I+ I L+S+++ ++ ++S+ S I+ E+ A Sbjct: 118 KSQLEAAECLGLSRPQTYWHVIVRPAIERVYPALTSQYVLLMLASSITSQISAEELTAVA 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT 203 RI S T++ Y + +YL L+ Sbjct: 178 NRIQSDTFRSFETYIVVGVLYLALS 202 >gi|148926135|ref|ZP_01809821.1| putative glutamine transport system permease [Campylobacter jejuni subsp. jejuni CG8486] gi|145845614|gb|EDK22706.1| putative glutamine transport system permease [Campylobacter jejuni subsp. jejuni CG8486] Length = 261 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 111/194 (57%), Gaps = 1/194 (0%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I ++ + + TL I+ S ++S+I+G + S + + FY+ + RGTP Sbjct: 53 IATYKEKFLQGFLNTLVISFFSLLLSIILGGIFCAFSLS-SIVFLRFLSTFYIELIRGTP 111 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LLVQ+ +I+Y + + + + +VA +I L+ +AY++EI R+ I+SI Q +++ A+G Sbjct: 112 LLVQVLLIYYIIANNLGLDNRYVAGVIILSCFSAAYLAEIFRAGILSISISQLESARALG 171 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L Q ++I PQ + PLS +F +++K +S+ S I + E+ Q+AQ I S T+ L Sbjct: 172 LKEMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQSAQEINSYTFATL 231 Query: 190 IIYCELAFVYLILT 203 Y LA YL+LT Sbjct: 232 EAYVILAITYLVLT 245 >gi|218895695|ref|YP_002444106.1| amino acid ABC transporter, permease protein [Bacillus cereus G9842] gi|228899326|ref|ZP_04063589.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis IBL 4222] gi|228963738|ref|ZP_04124880.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar sotto str. T04001] gi|218544782|gb|ACK97176.1| amino acid ABC transporter, permease protein [Bacillus cereus G9842] gi|228795974|gb|EEM43440.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar sotto str. T04001] gi|228860357|gb|EEN04754.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis IBL 4222] Length = 218 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ + +V R PL++ F+ ++ LP IGI Sbjct: 25 SVIALIGSFILGVILAVMRIA-PIRILNWVGSAFVEFVRNIPLVLIAFIFYFALPVIGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + H++LPQ + Sbjct: 84 LNGFVAGTVTLTVYTAAFIAEVIRAGILSVEKGQMEAARSSGLTYTQAMYHVVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|257485081|ref|ZP_05639122.1| amino acid ABC transporter protein, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330987290|gb|EGH85393.1| amino acid ABC transporter protein, permease [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010992|gb|EGH91048.1| amino acid ABC transporter protein, permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 216 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 58/152 (38%), Positives = 89/152 (58%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 TI+ + Y+ FR TPL+VQL+V+F+ LP GI F + +I L ++AYI+E R Sbjct: 49 TIVHRLSKGYLSFFRNTPLMVQLYVLFFALPLAGITFPAITTGVIGLGCYYAAYIAEAYR 108 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 +I IP GQW+A+ A+ +R T R IILPQ + L + I + K T + + I I Sbjct: 109 GAIDDIPAGQWEAARALDFSRGDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVIAI 168 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PE+FQ A++I TY+ Y +A ++L ++ Sbjct: 169 PELFQAAKQIAGMTYRYNEPYTVMALMFLAIS 200 >gi|298717122|ref|YP_003729764.1| ABC transport system permease [Pantoea vagans C9-1] gi|298361311|gb|ADI78092.1| Putative ABC transport system, permease protein [Pantoea vagans C9-1] Length = 226 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 58/158 (36%), Positives = 96/158 (60%), Gaps = 9/158 (5%) Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAY 105 SL FYVW+FRGTPLL+Q+F+++YGL + V +S + +++L LN +AY Sbjct: 46 SLFCRFYVWLFRGTPLLIQIFMVYYGLGSLPAVRESLFWPLLRDPYWCGLLALILNDAAY 105 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 SEI+R + ++ + +A+ G++ + I LP I + S+E IS++K+TS+ Sbjct: 106 TSEILRGGLRAVSQQSLEAAKVSGMSSYKIFTRITLPIAIRQALPAYSNEIISMIKATSL 165 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 STI++ E+ A IVS+T++ L ++ A +YLILT Sbjct: 166 VSTISLMEMTGIADSIVSSTFRALEVFLSAAVIYLILT 203 >gi|163744544|ref|ZP_02151904.1| amino acid ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] gi|161381362|gb|EDQ05771.1| amino acid ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] Length = 217 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 68/188 (36%), Positives = 112/188 (59%), Gaps = 2/188 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 FP LL + +TL + V+S ++G A++ ++ + +I ++ I RG P++V Sbjct: 12 FP-LLLEGVTLTLVTTLAAMVLSTMLGLIWAMM-LWSKFRTLRVISRSFITIIRGIPIIV 69 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I++ LP +GI + A II L L +SAY +E R+ I +I KGQ +A+Y+IG+T Sbjct: 70 QLFYIYFVLPELGINLTALQAGIIGLGLAYSAYQAENFRAGIEAIDKGQIEAAYSIGMTD 129 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 + +R +ILPQ I P + I +LK +S+ STIT+ E+ + Q I S+T+ + +Y Sbjct: 130 RMIMRRVILPQAIRIVLPPFGNTIIMLLKDSSLVSTITVAELTRQGQLIASSTFDNITVY 189 Query: 193 CELAFVYL 200 +A +YL Sbjct: 190 TLVAIMYL 197 >gi|303253513|ref|ZP_07339652.1| arginine transporter permease subunit ArtM [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248384|ref|ZP_07530407.1| Arginine ABC transporter permease protein artM [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307261838|ref|ZP_07543502.1| Arginine ABC transporter permease protein artM [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|302647623|gb|EFL77840.1| arginine transporter permease subunit ArtM [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855122|gb|EFM87302.1| Arginine ABC transporter permease protein artM [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306868455|gb|EFN00268.1| Arginine ABC transporter permease protein artM [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 227 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 117/211 (55%), Gaps = 13/211 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLF 75 A I +P + +SL+I F +AVI F +I I++ Y+ +F GTPLLVQ F Sbjct: 7 AVIAQGIPTSLSLTAVSLLIAFVLAVILTFLLSMESKLIKAIVNGYLMLFTGTPLLVQFF 66 Query: 76 VIFYGLPHIGIVFDSFVAIIIS---------LTLNFSAYISEIIRSSIISIPKGQWDASY 126 +I++G + DSF +S L LN +AY +++ ++ +IPKGQW+ Sbjct: 67 LIYHGPGQFQWIVDSFAWQFLSDAWFCAALALALNSAAYSTQLFHGAVKAIPKGQWETCA 126 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+GL+R T++ I++P + + S+E I + K TS+ASTIT+ +I A+++ T Y Sbjct: 127 ALGLSRLDTLK-ILIPYALRRALPSYSNEIILVFKGTSLASTITLLDIMGYARQLYGTEY 185 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + IY +YL++T I+ ++E+ V Sbjct: 186 DAITIYGIAGAIYLVITGIMTILLRRVEAKV 216 >gi|187927461|ref|YP_001897948.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12J] gi|309779837|ref|ZP_07674592.1| glutamate/aspartate transport system permease protein GltJ [Ralstonia sp. 5_7_47FAA] gi|187724351|gb|ACD25516.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12J] gi|308921414|gb|EFP67056.1| glutamate/aspartate transport system permease protein GltJ [Ralstonia sp. 5_7_47FAA] Length = 242 Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 112/197 (56%), Gaps = 11/197 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L A + T+ + S++I+L+IG + V+R + +S + YV +FR PL+VQLF+ Sbjct: 24 LLAGLKTTVVLGLSSWIIALVIGSVLGVLRTV-PNKWLSGLAAAYVEVFRNIPLIVQLFI 82 Query: 77 IFYGLPHIGIVFD----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 ++ +P + D F++ ++ L +A + E +RS I S+P+GQ +A Sbjct: 83 WYFVMPELVPGGDYIKQMNPATAMFLSAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGL 142 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G T QT R+++LP + PL+SEF++I K+++VASTI + E+ +++V T Sbjct: 143 AMGFTLAQTYRYVMLPMSFRIIVPPLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTA 202 Query: 187 QPLIIYCELAFVYLILT 203 QP + + +Y+++ Sbjct: 203 QPYESFIAVTLMYMLIN 219 >gi|146280412|ref|YP_001170565.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] gi|145568617|gb|ABP77723.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] Length = 219 Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 60/179 (33%), Positives = 101/179 (56%), Gaps = 10/179 (5%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLIMHFYVWIFRGT 68 P+LL A++ T+ IA F I++++G F+A+ R + S + LI R T Sbjct: 13 LPRLLDASLT-TIGIALAGFAIAVVLGLFLAIGRRSRHRWLSWPVTGLIE-----FIRST 66 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+Q++ +FY P+ G+ + A II + L+++ Y +E+ R+ + ++P+ QW+A A+ Sbjct: 67 PLLIQVYFLFYVFPNYGLNLSAMQAGIIGIALHYACYTAEVYRAGLDAVPRSQWEAVTAL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 + R +ILPQ + L + ISILK T V S IT+ EI Q A+ I S +++ Sbjct: 127 NMKPWTAYRDVILPQALRPVMPALGNYLISILKDTPVLSAITVVEIMQRAKNIGSESFR 185 >gi|116255277|ref|YP_771110.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259925|emb|CAK03019.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 222 Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y+ F +ID P LL + L +A +++++IG +R L++ Sbjct: 1 MNYKLDFTPVIDGLPSLLLGCLGTFL-LAICGMLLAIVIGIGGVALRDSALKPARWLVIA 59 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 F V + R TP LVQ+F I++ LP GI D II+L +N AY EIIR + SIPK Sbjct: 60 F-VELIRNTPFLVQIFFIYFALPLTGIRLDPTPTAIIALGINGGAYAIEIIRGGVQSIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A A+GL + Q R IIL + L+S+F+ + +TS+AS I+ E+ +Q Sbjct: 119 GQMEAGLALGLHKAQVFRLIILKPALRAIYPSLTSQFVLLTLTTSIASAISAYELTSVSQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 RI S +++ +Y + Y +++ Sbjct: 179 RIESESFRSFEVYFTVTVFYFVIS 202 >gi|222081148|ref|YP_002540511.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725827|gb|ACM28916.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 234 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 104/181 (57%), Gaps = 1/181 (0%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +T+ ++ +S ++ G +A +R + ++ YV + R TP LVQLF++++GLP Sbjct: 23 LTIRLSVLSIILGSAFGIVLASLRSV-RGKWVRFLVDAYVEVIRNTPFLVQLFIVYFGLP 81 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 IG+ + A +I +T+N +AY +EIIR+ I ++ K Q +A A+G TR Q RH+I+ Sbjct: 82 GIGLRVGADTAALIGMTINLAAYSTEIIRAGIEAVHKSQIEAGEALGFTRFQIYRHVIIV 141 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + L S+F+ ++ ++S+ S I+ E+ +A + S TY+ +Y + +YL L Sbjct: 142 PAVAKVYPALCSQFVLMMLASSICSAISTHELAASAAFVESQTYRSFEVYIVVTLMYLAL 201 Query: 203 T 203 Sbjct: 202 A 202 >gi|209547105|ref|YP_002279023.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538349|gb|ACI58283.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 229 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 70/221 (31%), Positives = 119/221 (53%), Gaps = 31/221 (14%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV---IRIFFSDTIISLI 57 M + W I + +LL ++T C+ +IS+++GF IA+ I + ++ + Sbjct: 1 MDFSW----IIPYRELLLQGALLT----CMLLLISVVLGFAIAIGLAIAQVGKNPVLKMA 52 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGL----PHIGIVFDSFVAII---------ISLTLNFSA 104 Y FRGTPLL+QL++I+YGL P I + SF+ I ++LTLNF+A Sbjct: 53 AKGYCTFFRGTPLLIQLWLIYYGLGSYLPFIPGLRSSFLWPIMREGLFFAAVALTLNFAA 112 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 Y EI+R +++++P+G+ +A+ A G+ +R I LP+ I + E I LK+T Sbjct: 113 YQGEILRGTLLAVPRGELEAAKAAGMRPGMVLRRIWLPRAIRIGLPTFAGEVILQLKATP 172 Query: 165 VASTITIPEIFQTAQRIVSTT---YQPLII----YCELAFV 198 + ++T+ +++ A +I T Y+PLI+ Y L FV Sbjct: 173 IVFSVTVMDLYGAAYKIRQDTLLVYEPLIVVAAFYVALTFV 213 >gi|153815715|ref|ZP_01968383.1| hypothetical protein RUMTOR_01953 [Ruminococcus torques ATCC 27756] gi|317501901|ref|ZP_07960085.1| amino acid ABC transporter [Lachnospiraceae bacterium 8_1_57FAA] gi|331088284|ref|ZP_08337203.1| hypothetical protein HMPREF1025_00786 [Lachnospiraceae bacterium 3_1_46FAA] gi|145846956|gb|EDK23874.1| hypothetical protein RUMTOR_01953 [Ruminococcus torques ATCC 27756] gi|316896581|gb|EFV18668.1| amino acid ABC transporter [Lachnospiraceae bacterium 8_1_57FAA] gi|330408528|gb|EGG87994.1| hypothetical protein HMPREF1025_00786 [Lachnospiraceae bacterium 3_1_46FAA] Length = 236 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 61/182 (33%), Positives = 103/182 (56%), Gaps = 5/182 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH----FYVWIFRGTPLLVQLFVIFY 79 T+ IA + VI ++IG IA R+ ++ +++ YV +FRGTP++VQL V +Y Sbjct: 31 TVLIAIVGLVIGILIGTVIATARVLPKYKVLPRVLNGICSVYVAMFRGTPMVVQLLVFYY 90 Query: 80 GL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 L P IG ++ LN AYISEI+RS I S+ GQ +A A+GL+ ++ Sbjct: 91 VLLPIIGWNITGVQVAMLVFGLNSGAYISEIMRSGIQSVDAGQMEAGRAVGLSFGASMMK 150 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 I++PQ + L +EFI+++K TSV S + +++ I + +Y+ ++ Y +A + Sbjct: 151 IVIPQAVKNILPTLGNEFIALIKETSVVSFVGAADLYVAFNYIGTNSYEFMVPYLVMALI 210 Query: 199 YL 200 Y+ Sbjct: 211 YI 212 >gi|71083758|ref|YP_266478.1| ABC transporter permease component [Candidatus Pelagibacter ubique HTCC1062] gi|71062871|gb|AAZ21874.1| ABC transporter permease component [Candidatus Pelagibacter ubique HTCC1062] Length = 226 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 61/154 (39%), Positives = 92/154 (59%), Gaps = 1/154 (0%) Query: 41 FIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLT 99 FI I + ++ I YV I R PLLV + I+YGLP G+ F FV+ II+L Sbjct: 43 FIVAIPSLAKNKFLTYINIGYVEIVRAIPLLVLILWIYYGLPIMTGLSFSPFVSGIIALA 102 Query: 100 LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISI 159 ++ SA+ +EI R+ I SI K QW+A ++GLT + +R +ILPQ I L ++F+ + Sbjct: 103 ISESAFQAEIFRAGINSIKKSQWEAGSSLGLTFYKRLRLVILPQAIKNILPALGNQFVYV 162 Query: 160 LKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 LK +S+ S I I ++ + A +V +TY+PL IY Sbjct: 163 LKMSSLVSIIGIGDLTRKANELVVSTYRPLEIYT 196 >gi|89072735|ref|ZP_01159300.1| putative ABC-type arginine/histidine transport system, permease component [Photobacterium sp. SKA34] gi|89051555|gb|EAR57009.1| putative ABC-type arginine/histidine transport system, permease component [Photobacterium sp. SKA34] Length = 229 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 115/202 (56%), Gaps = 6/202 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + +S VI LI I ++R S+ +I+ Y++ FRGTPLL+QL++I+YGL Sbjct: 20 TVWMVTVSLVIGLICAIPIGMMRNS-SNKLIAFPAWAYIYFFRGTPLLIQLYLIYYGLSQ 78 Query: 84 I----GIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 + G ++ +++ +++ LN +AY +EIIR SI S+P+G+ +A+ A G++ Q R Sbjct: 79 VIDVQGTMWQEAWFCALVAFILNTAAYTAEIIRGSINSMPQGEIEAAKAYGMSPFQAFRR 138 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 IILP + + S+E I ++ ++VA +TI ++ A+ + S Y P + Sbjct: 139 IILPSALRRALPAYSNEVIFMVHGSAVAGIVTIVDLTGAARIVNSRYYAPFESFLFAGLC 198 Query: 199 YLILTSFCYIIQIKIESSVTQH 220 Y++LT + K+E+ +H Sbjct: 199 YMVLTFAIIWVFKKLEARYLRH 220 >gi|154687482|ref|YP_001422643.1| YtmM [Bacillus amyloliquefaciens FZB42] gi|154353333|gb|ABS75412.1| YtmM [Bacillus amyloliquefaciens FZB42] Length = 235 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 69/197 (35%), Positives = 109/197 (55%), Gaps = 18/197 (9%) Query: 24 TLPIACISFVISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 T+P+ VI +I GFFIA+ +RIF +++ FYV FR TP ++ + +I+ Sbjct: 18 TVPLTLAMTVIPIIAGFFIALGNITVRIFRIKWLLAC-SAFYVSFFRSTPAILHIMLIYL 76 Query: 80 GLP----------HIGIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G+P H+G + V +I++L+L AY++EI+RS I+++ GQ +A+Y Sbjct: 77 GVPLIADQFSRAFHLGWSANQIPVAVFVIMALSLTAGAYMTEILRSGIMAVDTGQAEAAY 136 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +IGLTR Q IR ++LPQ S ++ I L +TS+A+ + +PEI TA S Y Sbjct: 137 SIGLTRSQMIRRVVLPQAFMISLPNFTNIGIGFLHTTSIAAIVAVPEITGTATIAASDNY 196 Query: 187 QPLIIYCELAFVYLILT 203 L + A +Y LT Sbjct: 197 AFLEAFIGAAVIYWGLT 213 >gi|332975353|gb|EGK12247.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette transporter, membrane protein [Desmospora sp. 8437] Length = 221 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 115/215 (53%), Gaps = 3/215 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + W + P+LL + + VT+ +F +L+ G +A+ R IS + Sbjct: 1 MDWNWDFTWNEVLPELL-SVLHVTIEATFGAFAFALVFGLILALGRRS-PHRWISWPTYG 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V FR TPLLVQL+ IF+ P + G+ A I+ L +++S Y+SE+ R+ I S+PK Sbjct: 59 FVEFFRTTPLLVQLYFIFFVFPDLFGLTLPPLAAGILGLGIHYSTYLSEVYRAGIESVPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A+ A+ + Q R IILPQ + + + I + K T + + I++ E+ TAQ Sbjct: 119 GQWEAATALNFSPWQKWRSIILPQAVRPVVPVMGNYLIVLFKETPLLAAISVGELLGTAQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I S T++ L + +LIL+ ++ ++E Sbjct: 179 SIGSNTFRYLEPITLVGIFFLILSYPTSLLVKRLE 213 >gi|310830297|ref|YP_003965397.1| polar amino acid ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] gi|308753203|gb|ADO44346.1| polar amino acid ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] Length = 222 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 107/198 (54%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + D+ L Y A + T+ ++ + V+ LI+ AV + ++ I+ YV Sbjct: 6 FRPVFDNLDMLFYGAWL-TVQLSFSAMVLGLIVSILGAVAKTS-GGRVLRFIVDIYVEAI 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP L+Q+F I++GLP IGI A +++L +N AY +EIIR+ I S+P+GQ +A Sbjct: 64 RNTPFLIQIFFIYFGLPAIGISMSPNTAALVALVINVGAYGTEIIRAGIESVPQGQVEAG 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+ L + Q R++IL + L+S+FI ++ ++SV S I+ ++ + + T Sbjct: 124 RALALNKVQIFRYVILKPALRNIYPSLTSQFIYLMLTSSVVSIISANDLAAAGADLSART 183 Query: 186 YQPLIIYCELAFVYLILT 203 + IY L +Y +L Sbjct: 184 FANFEIYLALTIIYFLLA 201 >gi|167748300|ref|ZP_02420427.1| hypothetical protein ANACAC_03044 [Anaerostipes caccae DSM 14662] gi|167652292|gb|EDR96421.1| hypothetical protein ANACAC_03044 [Anaerostipes caccae DSM 14662] Length = 226 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 117/204 (57%), Gaps = 7/204 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSD----TIISLIMHFYVWIFRGTPLLVQLF 75 + +T+ ++ ++ ++ + +G +A++R+ T++S I + Y+ I RGTP + QL Sbjct: 22 GLKMTILVSVLAILLGVALGTVLALMRLTAEKKGKSTVLSKIAYVYIDIIRGTPTVTQLM 81 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 ++F+ + G+ D + ++ LN +AY+SEIIR+ I+++ +GQ + ++GL+ QT Sbjct: 82 IMFFVILK-GV--DGLIVGTVTFGLNSAAYVSEIIRAGILAVDQGQMEGGRSLGLSYGQT 138 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 ++ IILPQ I L +EFI ++K T++ ++I ++ + A ++S TY+ L Sbjct: 139 MKDIILPQAIKNILPALGNEFIVLIKETAILGYVSIVDLSKAADFVISRTYEALTPLIGT 198 Query: 196 AFVYLILTSFCYIIQIKIESSVTQ 219 A +Y ++ ++ +E + Q Sbjct: 199 AVIYYLIVKVLTLVLNAVERRLRQ 222 >gi|152981388|ref|YP_001351724.1| ABC-type amino acid transport system, permease component [Janthinobacterium sp. Marseille] gi|151281465|gb|ABR89875.1| ABC-type amino acid transport system, permease component [Janthinobacterium sp. Marseille] Length = 218 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 51/146 (34%), Positives = 88/146 (60%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + Y+ IF+GTPLL+QLF++F+G+ GI +++A ++LTL +++++EI R + + Sbjct: 52 VARIYIEIFQGTPLLMQLFLVFFGIALFGIEVPAWLAAGLTLTLWSASFLAEIWRGCVEA 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQW+AS + + Q +R++ILPQ + + P + I+K T+V S I E+ + Sbjct: 112 IPRGQWEASSVLAMNYVQQMRYVILPQALRIALPPTIGFSVQIIKGTAVTSIIGFVELSK 171 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLIL 202 A I + T+ P +Y Y IL Sbjct: 172 AATVITNATFMPFTVYAAAGLFYFIL 197 >gi|148544726|ref|YP_001272096.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri DSM 20016] gi|184154078|ref|YP_001842419.1| glutamine ABC transporter permease component [Lactobacillus reuteri JCM 1112] gi|194466985|ref|ZP_03072972.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] gi|227363851|ref|ZP_03847956.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|227544433|ref|ZP_03974482.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300908280|ref|ZP_07125745.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] gi|325683061|ref|ZP_08162577.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] gi|148531760|gb|ABQ83759.1| amino acid ABC transporter membrane protein 2, PAAT family [Lactobacillus reuteri DSM 20016] gi|183225422|dbj|BAG25939.1| glutamine ABC transporter permease component [Lactobacillus reuteri JCM 1112] gi|194454021|gb|EDX42918.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] gi|227071078|gb|EEI09396.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|227185596|gb|EEI65667.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300894527|gb|EFK87884.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] gi|324977411|gb|EGC14362.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] Length = 217 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 122/206 (59%), Gaps = 11/206 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W N+ + L + +T+ ++ IS +IS I+G F+ +IR + + +S I+ F + Sbjct: 8 YSWINI------RFLLEGLWITIEVSVISIIISFILGTFLGIIR-YANIKYLSAIVGFII 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP+IGI + A I++L++ SA ++EI+RS I SI GQ Sbjct: 61 DIIRNLPLLLIIFFTYFGLPNIGIKPEIIPAAIMALSIFESAMVAEIVRSGINSIDYGQT 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + A GLT+ Q +R I+LPQ I L S+FIS++K TS+A+ I +PE+ AQ I Sbjct: 121 EGALANGLTKWQALRIIVLPQAIKNMMPALVSQFISLVKDTSLATIIVLPELMYHAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLILTSFCY 207 +I ++ LA +Y I+ CY Sbjct: 181 GQNTNYIIPMFVALAVLYFIV---CY 203 >gi|89073557|ref|ZP_01160079.1| ABC-type arginine/histidine transport system, permease component [Photobacterium sp. SKA34] gi|89050584|gb|EAR56070.1| ABC-type arginine/histidine transport system, permease component [Photobacterium sp. SKA34] Length = 223 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 61/163 (37%), Positives = 92/163 (56%), Gaps = 10/163 (6%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSI 114 +F GTPLLVQ+F+I+YG + +SFV +++L LN +AY +++ + + Sbjct: 55 LFTGTPLLVQIFLIYYGPGQFEGIRESFVWQWLSQPWFCAMLALALNTAAYSTQLFKGAF 114 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IPKGQW A A+G+ K T+R +LP I S S+E I + K TS+ASTITI +I Sbjct: 115 DAIPKGQWQACRALGMETKTTLR-TLLPFAIRRSVPAYSNEVILVFKGTSLASTITIMDI 173 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 AQRI + TY L ++ +YL + + I+ IE Sbjct: 174 MGYAQRINAQTYDTLTVFAIAGAMYLTVNALLSIVFRLIEKKA 216 >gi|53728960|ref|ZP_00348280.1| COG4160: ABC-type arginine/histidine transport system, permease component [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208815|ref|YP_001054040.1| arginine transporter permease subunit ArtM [Actinobacillus pleuropneumoniae L20] gi|190150672|ref|YP_001969197.1| arginine transporter permease ArtM [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307250611|ref|ZP_07532552.1| Arginine ABC transporter permease protein artM [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307257418|ref|ZP_07539187.1| Arginine ABC transporter permease protein artM [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307264020|ref|ZP_07545620.1| Arginine ABC transporter permease protein artM [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126097607|gb|ABN74435.1| arginine transport system permease protein ArtM [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|189915803|gb|ACE62055.1| arginine transport system permease protein ArtM [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306857352|gb|EFM89467.1| Arginine ABC transporter permease protein artM [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306864070|gb|EFM95984.1| Arginine ABC transporter permease protein artM [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306870631|gb|EFN02375.1| Arginine ABC transporter permease protein artM [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 227 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 117/211 (55%), Gaps = 13/211 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLF 75 A I +P + +SL+I F +AVI F +I I++ Y+ +F GTPLLVQ F Sbjct: 7 AVIAQGIPTSLSLTAVSLLIAFVLAVILTFLLSMESKLIKAIVNGYLMLFTGTPLLVQFF 66 Query: 76 VIFYGLPHIGIVFDSFVAIIIS---------LTLNFSAYISEIIRSSIISIPKGQWDASY 126 +I++G + DSF +S L LN +AY +++ ++ +IPKGQW+ Sbjct: 67 LIYHGPGQFQWIVDSFAWQFLSDAWFCAALALALNSAAYSTQLFHGAVKAIPKGQWETCA 126 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+GL+R T++ I++P + + S+E I + K TS+ASTIT+ +I A+++ T Y Sbjct: 127 ALGLSRLDTLK-ILIPYALRRALPSYSNEIILVFKGTSLASTITLLDIMGYARQLYGTEY 185 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + IY +YL++T I+ ++E+ V Sbjct: 186 DAITIYGIAGAIYLVITGIMTILLRRVEAKV 216 >gi|295114882|emb|CBL35729.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [butyrate-producing bacterium SM4/1] Length = 214 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 114/197 (57%), Gaps = 12/197 (6%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----ISLIMHFYVWIFRGTPLL 71 L + VTL ++ + ++ ++GF +A++R+ + ++ + YV I RGTP+L Sbjct: 2 LFMQGLGVTLLLSLVIVIVGTLLGFLLAMLRLSNWKIVKIRPLNTLAGIYVEIVRGTPML 61 Query: 72 VQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +QL+ ++ LP + V ++L LN +AY+SE+IRS I ++ KGQ +A+ ++G Sbjct: 62 LQLYFFYFMLPMAFPSMNLSPIVCCAVALCLNSAAYVSEVIRSGIQAVDKGQMEAARSLG 121 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE---IFQTAQRIVSTTY 186 L +Q + +ILPQ I L +EF+ ++K TS+AST + E ++QT + ++ + Sbjct: 122 LNHRQAMVKVILPQAIKNIMPALGNEFVMMIKDTSLASTFFVGELMTVWQTVRGVLYLSL 181 Query: 187 QPLIIYCELAFVYLILT 203 + LII + +Y I+T Sbjct: 182 ETLII---VGCIYFIVT 195 >gi|298346727|ref|YP_003719414.1| amino acid ABC transporter permease [Mobiluncus curtisii ATCC 43063] gi|304389571|ref|ZP_07371533.1| amino acid ABC superfamily ATP binding cassette transporter permease protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315655272|ref|ZP_07908173.1| amino acid ABC superfamily ATP binding cassette transporter permease protein [Mobiluncus curtisii ATCC 51333] gi|315656814|ref|ZP_07909701.1| amino acid ABC superfamily ATP binding cassette transporter permease protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298236788|gb|ADI67920.1| amino acid ABC superfamily ATP binding cassette transporter permease protein [Mobiluncus curtisii ATCC 43063] gi|304327124|gb|EFL94360.1| amino acid ABC superfamily ATP binding cassette transporter permease protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315490527|gb|EFU80151.1| amino acid ABC superfamily ATP binding cassette transporter permease protein [Mobiluncus curtisii ATCC 51333] gi|315492769|gb|EFU82373.1| amino acid ABC superfamily ATP binding cassette transporter permease protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 307 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 114/220 (51%), Gaps = 35/220 (15%) Query: 27 IACISFVISLIIGFF---------IAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 I I F ++L IG +AV+R + ++ + FY+W FRGTP+ QL I Sbjct: 58 IKGIGFTLALTIGAMTIGVTLAITMAVMRQS-PNPVLKGVAWFYIWFFRGTPVYTQL--I 114 Query: 78 FYGL---------------PHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 F+GL P + +V + F + ++ L LN AY++EI+R+ + S+ Sbjct: 115 FWGLLPTLYPMITLGIPFGPQLFAVETKLVLNMFWSAMLGLGLNEGAYLAEIVRAGLNSV 174 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI--TIPEIF 175 GQW+A+ A+G+ R +R I++PQ + P +E IS+LK+TS+ S + T+ F Sbjct: 175 NPGQWEAATALGMKRSMILRRIVIPQAMRVIVPPTGNETISMLKTTSLVSVVPFTLELNF 234 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q AQ + T+ P+ + A YL++TS + Q +E Sbjct: 235 Q-AQNLGRLTFMPVPMMICAAIWYLLITSILMVGQYYLEK 273 >gi|209549650|ref|YP_002281567.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535406|gb|ACI55341.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 268 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 114/202 (56%), Gaps = 17/202 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ +A ++ I L IGF +A+ + + + L Y IFRG P L+ LF+I+Y Sbjct: 52 GLQVTVSVAIVTLPIGLAIGFLVALGQQS-EEKSLRLAAGIYTTIFRGLPELLTLFIIYY 110 Query: 80 G--------LPHIG-----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G L +G + ++F+A +I+L++ FSAY SE++ S+ +IPKGQ++A Sbjct: 111 GMQMLIQSLLTFVGYDGPPVEINAFLAGVIALSVVFSAYCSEVLLSAFRAIPKGQYEAGD 170 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL +T+R IILPQ + + L++ ++ +LK TS S I++ +I + V T Sbjct: 171 SLGLHHGRTLRLIILPQLVRIALPGLTNLWMVLLKDTSYVSIISLADILRQTSVAVRVTK 230 Query: 187 QPLIIY---CELAFVYLILTSF 205 +P Y C L V IL+SF Sbjct: 231 EPFFFYGLACCLYLVLAILSSF 252 >gi|220922366|ref|YP_002497668.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium nodulans ORS 2060] gi|219946973|gb|ACL57365.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 217 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 110/192 (57%), Gaps = 1/192 (0%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F +L + +T+ I S V+S +G A++R+ ++S + ++ + RG P++ Sbjct: 10 EFVPILLQGVQLTILITVGSLVVSTALGLVWAMMRVS-GIPLLSGLSATFINVIRGIPII 68 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 VQLF I++ LP GI + A ++ L L +SAY +E R++I +I KGQ +A+ IG+ Sbjct: 69 VQLFYIYFVLPDFGIALTAVQAGVLGLGLAYSAYQAENFRAAIEAIDKGQIEAAQTIGMG 128 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 T+R ++LPQ + + P + I +LK +S ASTIT+ E+ + I S T++ + Sbjct: 129 WGLTMRRVVLPQALRIALPPYGNVMIMMLKDSSQASTITVAELALQGKLIASATFKNTSV 188 Query: 192 YCELAFVYLILT 203 + +A +YL L+ Sbjct: 189 FTLVALMYLTLS 200 >gi|229031799|ref|ZP_04187788.1| Arginine transport system permease protein artQ [Bacillus cereus AH1271] gi|228729545|gb|EEL80533.1| Arginine transport system permease protein artQ [Bacillus cereus AH1271] Length = 197 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 111/196 (56%), Gaps = 2/196 (1%) Query: 25 LPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI 84 + I +S ++ I+G +A+ +I +++ FY IFRGTPL++QL +I++G+P I Sbjct: 1 MKIVAVSALVGFILGTLLALCKIA-RIRALNIAADFYTSIFRGTPLVLQLMIIYFGVPQI 59 Query: 85 -GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 G +FVA +++ +LN AY+SE+IR+ I ++ GQ +A+ A+G+ + +R+II PQ Sbjct: 60 IGYEIPAFVAAVLAFSLNSGAYMSEVIRAGIQAVDNGQTEAAMALGIPYGKMMRNIIFPQ 119 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + L +EF ++ K ++V + I ++ + A + T++ L + +Y +L Sbjct: 120 ALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYMLV 179 Query: 204 SFCYIIQIKIESSVTQ 219 ++ IE + + Sbjct: 180 IILTLVGKAIEGRMKK 195 >gi|190892107|ref|YP_001978649.1| amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190697386|gb|ACE91471.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 276 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 64/217 (29%), Positives = 120/217 (55%), Gaps = 13/217 (5%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P+ L+ + +TL + IS V ++ +A+ R+ + +++ + + Y++ FRGTPLL Q Sbjct: 60 PRYLHG-LWITLSLVAISVVCGAVLSLPLAMARLS-KNRVLNWLAYGYIYFFRGTPLLAQ 117 Query: 74 LFVIFYGL----PH---IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 LF+++YGL P +GI + D++ + ++T+N +AY +EI+R +I S+P GQ + Sbjct: 118 LFLVYYGLGVFRPQLEAVGIWWFFRDAWYCGLFAMTINTAAYQAEILRGAIESVPHGQHE 177 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+G+ + R I+LPQ + P +E I ++K ++V + IT+ ++ + S Sbjct: 178 AAAALGIHKVMAFRKIVLPQAFIVALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFS 237 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T+ Y A YL + + IE +T+H Sbjct: 238 RTFD-YQTYLWAAIFYLTIVEALRHLWAWIERRLTRH 273 >gi|123441156|ref|YP_001005144.1| ABC transporter, inner-membrane component [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088117|emb|CAL10905.1| ABC transporter, inner-membrane component [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 212 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 102/185 (55%), Gaps = 4/185 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFI-AVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A+ VTL I+ + +I GF + AV R + + YVW+ RGTP L QL V + Sbjct: 14 ALGVTLGISMSAAIIGACAGFILQAVCR---NSRWLFWPWRTYVWLIRGTPYLAQLAVFY 70 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 +GLP IG+ + A +ISL + SAY EI R++ SI GQ +A+ ++ ++ H Sbjct: 71 FGLPAIGVTLSAVEATVISLAIYSSAYFGEIFRTAWKSIGHGQLEAAQVHDISAWKSFWH 130 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 I PQ + S L ++FI +K ++VAS IT+PE+ T +IV+ TY ++ Y L Sbjct: 131 IQTPQALRFSLPLLGNQFILTIKESAVASIITVPELTMTTGQIVANTYTYIVPYTLLILS 190 Query: 199 YLILT 203 Y +L Sbjct: 191 YWLLA 195 >gi|86151036|ref|ZP_01069252.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 260.94] gi|86153144|ref|ZP_01071349.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni HB93-13] gi|121612505|ref|YP_001000623.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter jejuni subsp. jejuni 81-176] gi|167005552|ref|ZP_02271310.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 81-176] gi|85842206|gb|EAQ59452.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 260.94] gi|85844029|gb|EAQ61239.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni HB93-13] gi|87248894|gb|EAQ71857.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 81-176] Length = 261 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 67/196 (34%), Positives = 114/196 (58%), Gaps = 5/196 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRG 67 I ++ + + TL I+ S ++S+I+G V F +I+ L + FY+ + RG Sbjct: 53 IATYKEKFLQGFLNTLIISFFSLLLSIILG---GVFCAFSLSSIVFLRFLSTFYIELIRG 109 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLLVQ+ +++Y + + + + +VA +I L+ +AY++EI R+ I+SI Q +++ A Sbjct: 110 TPLLVQVLLMYYIIANNLGLDNRYVAGVIILSCFSAAYLAEIFRAGILSISISQLESARA 169 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL Q ++I PQ + PLS +F +++K +S+ S I + E+ Q+AQ I S T+ Sbjct: 170 LGLKEMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQSAQEINSYTFA 229 Query: 188 PLIIYCELAFVYLILT 203 L Y LA YLILT Sbjct: 230 TLEAYVILAITYLILT 245 >gi|229168897|ref|ZP_04296614.1| Arginine transport system permease protein artQ [Bacillus cereus AH621] gi|228614489|gb|EEK71597.1| Arginine transport system permease protein artQ [Bacillus cereus AH621] Length = 219 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 119/215 (55%), Gaps = 3/215 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I S P +L + VTL I S + I+G +A+ +I + ++ Y IF Sbjct: 5 FSAITPSIPYIL-KGLEVTLKIVAASALAGFILGTLLALCKIARIRAL-NIAADIYTSIF 62 Query: 66 RGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPL++QL +I++G+P IG +F+A +++ +LN AY+SE+IR+ I ++ KGQ +A Sbjct: 63 RGTPLVLQLMIIYFGVPQMIGYEIPAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ + +++II PQ + L +EF ++ K ++V + I ++ + A + Sbjct: 123 AMALGIPYGKMMKNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGE 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ L + +Y +L ++ IE + + Sbjct: 183 TFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKK 217 >gi|227500392|ref|ZP_03930454.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Anaerococcus tetradius ATCC 35098] gi|227217455|gb|EEI82774.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Anaerococcus tetradius ATCC 35098] Length = 491 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 114/209 (54%), Gaps = 18/209 (8%) Query: 9 IIDSFP-QLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISL-------- 56 IID+ + L + T+ + S +IS I+G IA++R I +D + L Sbjct: 268 IIDNGSYKYLLDGLKTTVIVTVSSLIISFILGLIIALVRSAKIDMADELSGLPKFILLAL 327 Query: 57 --IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI-IISLTLNFSAYISEIIRSS 113 I+ +V I RGTP +QL ++F I D+ V + IIS LN SAY++E+ R Sbjct: 328 DKILGLFVTIIRGTPTTIQLLIMFN---VILANLDNLVLVAIISFALNSSAYMAELFRGG 384 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I S+ KG+ +A+ ++GL+ QT++ +++PQ I S L +E I++ K TS++ I + + Sbjct: 385 INSVNKGEKEAARSLGLSNFQTMKKVVMPQAIKNSLPALGNEVITLFKETSISGFIGLAD 444 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + + A ++S T+ Y A +YLI+ Sbjct: 445 LTRGASIVISQTFDAATAYFSAAIIYLII 473 >gi|190895058|ref|YP_001985351.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700719|gb|ACE94801.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|327194399|gb|EGE61259.1| putative amino acid ABC transporter permease [Rhizobium etli CNPAF512] Length = 213 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 67/189 (35%), Positives = 105/189 (55%), Gaps = 9/189 (4%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHF------YVWIFRGTPLLVQLFVIFYGLPHIGI 86 V+S++IGF IA I S ++S F ++ FRG PLLVQL +I+ LP IGI Sbjct: 21 VVSILIGFAIA---ILLSGMLLSGRSLFVRSAQIFISFFRGVPLLVQLLLIYNLLPAIGI 77 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 S VA II L+L +AY +E +R S+P G +++ +GLT +Q R I +P + Sbjct: 78 NVPSIVAAIIGLSLCTAAYQAENLRGGFASVPLGLLESAEMVGLTPRQVFRRIKVPIALR 137 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFC 206 + L +E I ILK++S+ S + I E+ + AQ + +T+ PL I+ +YL++ Sbjct: 138 LTFPALVNEAILILKASSLVSVVGIVELTRMAQDLAGSTFLPLQIFASAGLIYLMINWLV 197 Query: 207 YIIQIKIES 215 + IE+ Sbjct: 198 ALAGGMIEN 206 >gi|229552146|ref|ZP_04440871.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|258539560|ref|YP_003174059.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc 705] gi|229314448|gb|EEN80421.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|257151236|emb|CAR90208.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus Lc 705] Length = 485 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 64/180 (35%), Positives = 109/180 (60%), Gaps = 9/180 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ I +++G A++R+ + LI Y+ RGTPL++Q+ +++G Sbjct: 290 TLLISAIGAFFGVLLGTIFALLRLS-KHRLPHLIGVAYIEFVRGTPLMIQVMFVYFG--- 345 Query: 84 IGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IGI D + VA +I+++LN +AY++EIIRS I SIP GQ +A+ ++GL+ +QT+ ++L Sbjct: 346 IGIFIDIPALVAGLIAVSLNSAAYVAEIIRSGIDSIPIGQTEAARSLGLSERQTMTSVVL 405 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY---QPLIIYCELAFV 198 PQ I L +EFIS++K +S+ S I + ++ + + TY QP+++ L FV Sbjct: 406 PQAIKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLTVVQTATYKGVQPILVAMVLYFV 465 >gi|218887009|ref|YP_002436330.1| polar amino acid ABC transporter inner membrane protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|147842971|dbj|BAF62530.1| glutamine ABC transporter, permease protein [Desulfovibrio vulgaris] gi|218757963|gb|ACL08862.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 223 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 105/197 (53%), Gaps = 9/197 (4%) Query: 11 DSFPQLLYA---AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +S P LL I++TL I F++ G + + YV RG Sbjct: 12 ESVPLLLGGVHLTIIITLGGLAIGFLLGTATGLAKTA-----RGKLPRALADIYVEAIRG 66 Query: 68 TPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 TPL+VQ+ +++G+P G+ A II++ +N AYI+EI+R ++ SI GQ +A Sbjct: 67 TPLIVQVMFLYFGVPLATGMRIPPVTAGIIAIAVNSGAYIAEIVRGAVESIDVGQTEAGR 126 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +IGLTR QT+ +++ PQ PL ++FI LK TS+ I + E+ + Q I++ + Sbjct: 127 SIGLTRMQTLLYVVWPQAFRRMIPPLGNQFIISLKDTSLLVVIGVGELTRQGQEIIAVNF 186 Query: 187 QPLIIYCELAFVYLILT 203 + ++ +A +YL++T Sbjct: 187 RAFEVWLTVAVMYLVMT 203 >gi|303250563|ref|ZP_07336760.1| arginine transporter permease subunit ArtM [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252992|ref|ZP_07534879.1| Arginine ABC transporter permease protein artM [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650551|gb|EFL80710.1| arginine transporter permease subunit ArtM [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859521|gb|EFM91547.1| Arginine ABC transporter permease protein artM [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 227 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 117/211 (55%), Gaps = 13/211 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLF 75 A I +P + +SL+I F +AVI F +I I++ Y+ +F GTPLLVQ F Sbjct: 7 AVIAQGIPTSLSLTAVSLLIAFVLAVILTFLLSMESKLIKAIVNGYLMLFTGTPLLVQFF 66 Query: 76 VIFYGLPHIGIVFDSFVAIIIS---------LTLNFSAYISEIIRSSIISIPKGQWDASY 126 +I++G + DSF +S L LN +AY +++ ++ +IPKGQW+ Sbjct: 67 LIYHGPGQFQWIVDSFAWQFLSDAWFCAALALALNSAAYSTQLFHGAVKAIPKGQWETCA 126 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+GL+R T++ I++P + + S+E I + K TS+ASTIT+ +I A+++ T Y Sbjct: 127 ALGLSRLDTLK-ILIPYALRRALPSYSNEIILVFKGTSLASTITLLDIMGYARQLYGTEY 185 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + IY +YL++T I+ ++E+ V Sbjct: 186 DAITIYGIAGAIYLVITGIMTILLRRVEAKV 216 >gi|241895708|ref|ZP_04783004.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] gi|241871075|gb|EER74826.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] Length = 214 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 67/217 (30%), Positives = 125/217 (57%), Gaps = 6/217 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWI 64 + II P +L + + +T+ + ++ + S+ +G +++ SD ++ +M+ YVWI Sbjct: 1 MDYIIQILPSIL-SGLKMTIGVFVLTLIGSVPLGILVSLA--LRSDIYLLKWVMNAYVWI 57 Query: 65 FRGTPLLVQLFVIFYGLPHIGIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RGTPLL+Q+ ++YGL I+ F A +++ LN++AY +EI R I SIP GQ+D Sbjct: 58 MRGTPLLLQIVFVYYGLSLANIMTLPRFEAAVVTFILNYAAYFAEIFRGGIQSIPDGQYD 117 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 + +GL++ QT+R I+LPQ + +E ++++K +S+ I + ++ + A I + Sbjct: 118 GAKVLGLSKFQTMRKIVLPQVFKIVMPSMGNEVVNLVKDSSLVYVIGLGDLMR-AGNIAA 176 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + L+ Y + VYL+L + IIQ + ES + + Sbjct: 177 SRDVTLVPYLLVGLVYLVLIALATIIQRRTESKLNYY 213 >gi|296126896|ref|YP_003634148.1| polar amino acid ABC transporter, inner membrane subunit [Brachyspira murdochii DSM 12563] gi|296018712|gb|ADG71949.1| polar amino acid ABC transporter, inner membrane subunit [Brachyspira murdochii DSM 12563] Length = 237 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 120/213 (56%), Gaps = 14/213 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRI-----------FFSDTIISLIMHFYVWIFRGT 68 ++ ++ ++ VI +++G FIA++++ F + +S I YV I RGT Sbjct: 24 GLIFSVGTTALATVIGIVLGIFIALLQLSEFYPFKNSKKFSNFNPLSKIAFLYVNILRGT 83 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAII--ISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P++VQL +I+ + + + D+ + II I+ +N AY++EIIR+ I S+ KGQ +A+ Sbjct: 84 PVVVQL-MIWANVVFVDSLRDTPILIIAAIAFGINSGAYVAEIIRAGIQSLDKGQMEAAR 142 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G+ +++ II+PQ I PL SEFI++LK TSV I ++ ++A I S TY Sbjct: 143 ALGMNYSLSMKEIIIPQAIKKILPPLVSEFIALLKETSVVGFIGGVDLLRSANIITSQTY 202 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + + + +Y ILTS + K+E + + Sbjct: 203 RGVEPLIAVGIIYFILTSIFAMFMRKVEEGLRE 235 >gi|241661991|ref|YP_002980351.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12D] gi|240864018|gb|ACS61679.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] Length = 242 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 111/197 (56%), Gaps = 11/197 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L A + T+ + S++I+L+IG + V+R + +S + YV +FR PL+VQLF+ Sbjct: 24 LLAGLKTTVVLGLSSWIIALVIGSVLGVLRTV-PNKWLSGLAAAYVEVFRNIPLIVQLFI 82 Query: 77 IFYGLPHIGIVFD----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 ++ +P + D F+ ++ L +A + E +RS I S+P+GQ +A Sbjct: 83 WYFVMPELVPGGDYIKQMNPATAMFLCAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGL 142 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G T QT R+++LP + PL+SEF++I K+++VASTI + E+ +++V T Sbjct: 143 AMGFTLAQTYRYVMLPMSFRIIVPPLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTA 202 Query: 187 QPLIIYCELAFVYLILT 203 QP + + +Y+++ Sbjct: 203 QPYESFIAVTLMYMLIN 219 >gi|258645825|ref|ZP_05733294.1| glutamine ABC transporter, permease protein [Dialister invisus DSM 15470] gi|260403195|gb|EEW96742.1| glutamine ABC transporter, permease protein [Dialister invisus DSM 15470] Length = 230 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 65/189 (34%), Positives = 107/189 (56%), Gaps = 14/189 (7%) Query: 30 ISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 ISF +S G F+ VI F + I+ + YV + RGTP+LVQ+ ++F+GLP +GI Sbjct: 25 ISF-LSCFFGLFLGVILAFMKISGVKILQAVAAVYVEVIRGTPVLVQISLVFFGLPFLGI 83 Query: 87 VFDSFV----------AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 F +F A +++L LN AY EI+RS I SI KGQ +A+ ++G ++ +++ Sbjct: 84 QFPNFEIWGVDFERLSAGVLALILNSGAYQCEIVRSGIQSIHKGQLEAAMSLGFSKWESM 143 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 II+PQ I + +EF++++K +S S I + ++ TA I ++QP +A Sbjct: 144 VRIIIPQAIRNILPVIGNEFVTLIKESSQVSVIGMADLMYTAATIQGISFQPFPPLVIVA 203 Query: 197 FVYLILTSF 205 Y ++T F Sbjct: 204 VYYFVMTFF 212 >gi|78357350|ref|YP_388799.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219755|gb|ABB39104.1| amino acid ABC transporter membrane protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 261 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 54/153 (35%), Positives = 92/153 (60%), Gaps = 1/153 (0%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEII 110 + +I+ I YV + RG PLLVQLF I+Y L + S VA +I++++ + AY+ E+ Sbjct: 90 NKLINTIASTYVEVVRGIPLLVQLFYIYYALGRF-LQVPSMVAAVIAMSVCYGAYMGEVF 148 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R+ I SI KGQ +AS ++G QT+ +ILPQ T P+ +EFI++LK TS+ S + Sbjct: 149 RAGIDSIDKGQTEASRSLGFNNVQTMFLVILPQAWRTILPPVGNEFIAMLKDTSLVSILA 208 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + ++ + + + ++ Y +A +YL++T Sbjct: 209 VADVLRRGREFAAESFLYFETYTMVALIYLVIT 241 >gi|300313166|ref|YP_003777258.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300075951|gb|ADJ65350.1| ABC-type amino acid transport system, permease protein [Herbaspirillum seropedicae SmR1] Length = 227 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 57/173 (32%), Positives = 102/173 (58%), Gaps = 3/173 (1%) Query: 34 ISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 +S+++GF + + + ++L+ YV I R TPLLVQ+F++F+GL IG + Sbjct: 30 LSIVLGFAVGTLCAIAGKSRLALVRGLVLAYVEIIRNTPLLVQVFLVFFGLASIGWKLSA 89 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 A +I+LT+N AY +EI+R+ I SI GQ +A+ +G++R H++L + Sbjct: 90 ETAAVIALTVNVGAYTTEIMRAGINSIHPGQIEAAECLGMSRFHVYWHVVLLPAVERVYP 149 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L+S+FI ++ ++S+ S I+ E+ TA + S T++ +Y +A YL+L+ Sbjct: 150 SLTSQFILLMLASSITSQISAEELTATANLVQSETFRSFEVYAVIAVAYLVLS 202 >gi|126652699|ref|ZP_01724860.1| hypothetical protein BB14905_23073 [Bacillus sp. B14905] gi|126590548|gb|EAZ84666.1| hypothetical protein BB14905_23073 [Bacillus sp. B14905] Length = 234 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 115/201 (57%), Gaps = 9/201 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F LI P LL + VT I S + +++G +A+ ++ + LI Y+ Sbjct: 7 FVLIAKVLPTLL-QYLPVTAEILVFSILFGMVLGIMLAIPKLLNVAGLKQLI-TIYISFI 64 Query: 66 RGTPLLVQLFVIFYGLP------HIGIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RGTP+LVQLF++FYG+P HI + D+ +II+ TL+ +A +EI R++I+++ Sbjct: 65 RGTPILVQLFLVFYGVPALLKLIHIDVTRMDAMYFVIITYTLSNAAAFAEIFRAAILTVD 124 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+Y++GL+ Q I+ PQ I + +++ IS LK TS+A +I + ++ Sbjct: 125 RGQMEAAYSVGLSGPQAFLRIVFPQAIRVAFPNIANTMISSLKDTSLAFSIGVMDMVGRG 184 Query: 179 QRIVSTTYQPLIIYCELAFVY 199 + ++++T + IY L+ VY Sbjct: 185 EALIASTTRAFEIYVALSIVY 205 >gi|972903|gb|AAA95980.1| ArtM [Haemophilus influenzae] Length = 227 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 99/177 (55%), Gaps = 10/177 (5%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTL 100 + I ++ Y+ +F GTPLLVQ F+I+ G + DS + ++L L Sbjct: 41 ENKWIKSAVNLYLTLFTGTPLLVQFFLIYAGPGQFQWIIDSPLWYVLSNAWFCAALALRL 100 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N +AY +++ ++ +IPKGQW++ A+GL R QT++ I++P + + S+E I + Sbjct: 101 NSAAYSTQLFHGAVKAIPKGQWESCGALGLNRIQTLK-ILIPYALKRALPSYSNEIILVF 159 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 K T++ASTITI +I A+++ T Y L IY +YLI+T ++ K+E V Sbjct: 160 KGTALASTITIMDIMGYARQLYGTEYDALTIYGIAGGIYLIITGIATLLLRKLEKKV 216 >gi|283832262|ref|ZP_06352003.1| amino acid ABC transporter, permease protein [Citrobacter youngae ATCC 29220] gi|291071904|gb|EFE10013.1| amino acid ABC transporter, permease protein [Citrobacter youngae ATCC 29220] Length = 235 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 116/216 (53%), Gaps = 11/216 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S V+ I+ F+A+ R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLISSVVMGGILALFLAIGRVS-SNKFIQFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTDFLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSSFKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 P + A +YLI++ + K E QH S Sbjct: 199 PFTAFGIAAVLYLIISYVLISLFRKAEKRWLQHVSS 234 >gi|227822265|ref|YP_002826236.1| predicted amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] gi|227341265|gb|ACP25483.1| predicted amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 267 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 120/219 (54%), Gaps = 19/219 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +VT +A + I L IGFFIA+ + + + L + Y IFRG P L+ LF+++Y Sbjct: 52 GFLVTASLAIATLPIGLAIGFFIALAKQS-PERSLRLSANIYTTIFRGLPELLTLFIVYY 110 Query: 80 GL--------PHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 GL +G + ++FVA +I+L + FSAY SE++ S+ +IP+GQ++A A Sbjct: 111 GLQILVQQFLATLGYEEPVEINAFVAGMIALGVVFSAYCSEVLLSAFKAIPQGQYEAGDA 170 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ--RIVST 184 +G R +T+R IILPQ + + L + ++++LK T++ S I + +I QT Q R+ Sbjct: 171 LGFHRGKTMRLIILPQLVRIALPGLGNLWMALLKDTALVSVIGLQDILRQTGQAARMTKQ 230 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 +Q + C L +L+L ++ +E S + S Sbjct: 231 AFQFFGVACVL---FLVLAMISSVVFSALERSTKRAEMS 266 >gi|315639957|ref|ZP_07895087.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] gi|315484282|gb|EFU74748.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] Length = 223 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 116/205 (56%), Gaps = 12/205 (5%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 MK++ N +++ FP ++ + + TL ++ IS ++IIG IA+++ + I + F Sbjct: 1 MKFD-VNYMLEVFPSIV-SYVPTTLMLSIISMFFAVIIGLVIALLK----RSEIPGLTQF 54 Query: 61 ---YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVA---IIISLTLNFSAYISEIIRSSI 114 Y+ +FRG P LVQLF+I+YGLP I + A II +L S+Y++EI R+++ Sbjct: 55 ATLYISLFRGMPTLVQLFIIYYGLPQIFPEMSNLQASQAAIIGFSLKESSYLAEIFRAAL 114 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+ KGQ +A A+G+ + + IILPQ + + FIS++K +S+A T+ I E+ Sbjct: 115 GSVDKGQMEAGLAVGMKKVKIYTRIILPQAAVNALPATGNTFISLIKESSLAFTLGITEL 174 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVY 199 F + + + + + Y + VY Sbjct: 175 FAEGKMLAAASLRFFETYLVVGLVY 199 >gi|310766722|gb|ADP11672.1| Putative amino acid ABC transporter, permease protein [Erwinia sp. Ejp617] Length = 221 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 107/191 (56%), Gaps = 2/191 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 +P+L+ + + VT+ + ++ + +G A +R +++S I YV + R TP +V Sbjct: 14 WPELV-SGLWVTIQLTVMATTGGVALGIVGAALR-SGKPSLLSRIWGVYVELIRNTPFVV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I +GLP++G+ + A ++++ +N AY +EIIR+ I PKGQW+A +G+TR Sbjct: 72 QLFFIVFGLPNLGLKLTAGEAALLAMLINLGAYSTEIIRAGIQVTPKGQWEAGRVLGMTR 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +QT ++LP + L S+ I ++ +SV S ++ E+ A I S T+ +Y Sbjct: 132 RQTFMRVVLPPALKRIYPALVSQCIIVMLGSSVVSQVSYEELTFAANLIQSRTFLSFEVY 191 Query: 193 CELAFVYLILT 203 +YL L+ Sbjct: 192 LVTTLMYLALS 202 >gi|257077631|ref|ZP_05571992.1| amino acid ABC transporter [Enterococcus faecalis JH1] gi|256985661|gb|EEU72963.1| amino acid ABC transporter [Enterococcus faecalis JH1] Length = 149 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 91/149 (61%), Gaps = 1/149 (0%) Query: 71 LVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +V F I++GLP + G F+A II+LTLN SAYISEI+R I ++P GQ +AS ++G Sbjct: 1 MVLAFFIYFGLPGVLGFNIPVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSLG 60 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+ +T++ IILPQ I ++F+ LK T++ S I + E+ QT + IV+ T Q Sbjct: 61 LSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQST 120 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVT 218 ++Y +A +YLIL + + +E V Sbjct: 121 MVYFVIALIYLILITSLTKLAKNLEKKVN 149 >gi|328554364|gb|AEB24856.1| glutamine ABC transporter (permease) [Bacillus amyloliquefaciens TA208] gi|328912768|gb|AEB64364.1| glutamine ABC transporter (permease) [Bacillus amyloliquefaciens LL3] Length = 218 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 62/163 (38%), Positives = 96/163 (58%), Gaps = 1/163 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ ++TL +A IS ++S I G +R + +S ++ V R PLL+ +F Sbjct: 15 LWNGFLITLYVALISIILSFIFGLAAGTLR-YAKIPAVSGVIAAIVETIRNLPLLLIIFF 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 F+ LP IGI + A I +LT+ SA +SEIIRS + S+ KGQ +A+ + GLT QT+ Sbjct: 74 TFFALPEIGIKLEITAAAITALTIFESAMLSEIIRSGLQSVEKGQIEAARSSGLTYTQTL 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +++PQ + P+ S+FIS+LK TS+A I +PE+ AQ Sbjct: 134 FLVVMPQALRRMVPPIVSQFISLLKDTSLAVVIALPELIHNAQ 176 >gi|317472894|ref|ZP_07932200.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA] gi|316899614|gb|EFV21622.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA] Length = 227 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 74/217 (34%), Positives = 121/217 (55%), Gaps = 20/217 (9%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 FP L A+ +TL +A S + + IIG + + + I+++I YV I RGTPL+V Sbjct: 11 FPSFL-TALGLTLQLALASLICASIIGIIFGMFSVS-KNKILNIICKIYVDIIRGTPLVV 68 Query: 73 QLFVIFYG-----LPHIGIVFDSF----VAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 Q+F+++YG L + + +D F VA +++L+LN AY++EI+R I S+ KGQ + Sbjct: 69 QVFIMYYGVAGAFLQPMDLNWDDFGGPFVAAVVALSLNAGAYMAEIVRGGIESVDKGQME 128 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++GL + + +ILPQ I T + ++FI +K TS+ I I E+ +Q I Sbjct: 129 AARSLGLPYGKAMSKVILPQAIRTMLPSIINQFIISIKDTSLVYAIGIRELTMNSQII-- 186 Query: 184 TTYQP---LIIYCELAFVYL----ILTSFCYIIQIKI 213 T +P + IY A YL IL+ I++ K+ Sbjct: 187 TANEPTSVMSIYVMAAIYYLVICTILSKVANIVERKL 223 >gi|291521932|emb|CBK80225.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Coprococcus catus GD/7] Length = 236 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 56/152 (36%), Positives = 91/152 (59%), Gaps = 1/152 (0%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEII 110 +++ I FYV +FRGTP++VQL V +Y L P IG+ ++ LN AYISEI+ Sbjct: 63 KVLNAICSFYVALFRGTPMVVQLLVFYYVLLPIIGLKITGVQVAMMVFGLNSGAYISEIM 122 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 RS I S+ GQ +A A+GL+ ++ I++PQ + L +EFIS++K TSV S + Sbjct: 123 RSGIQSVDPGQMEAGRAVGLSFGTSMIKIVIPQAVKNILPTLGNEFISLIKETSVVSFVG 182 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 +++ I S +Y+ ++ Y +A +Y++L Sbjct: 183 AADLYVAFNYIGSNSYEFMVPYLVMALIYIVL 214 >gi|229089703|ref|ZP_04220964.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-42] gi|228693602|gb|EEL47304.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-42] Length = 218 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 106/176 (60%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +A++RI I++ + +V R PL++ F+ ++ LP +GI Sbjct: 25 SVIALIGSFILGVVLAIMRIA-PIRILNWLGTAFVEFVRNIPLVLIAFIFYFALPVVGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT KQ + H++LPQ + Sbjct: 84 LNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYKQAMYHVVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGVDLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|153952035|ref|YP_001398237.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter jejuni subsp. doylei 269.97] gi|152939481|gb|ABS44222.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. doylei 269.97] Length = 261 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 67/182 (36%), Positives = 109/182 (59%), Gaps = 5/182 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVIFYGL 81 TL I+ S ++S+I+G V F +II L + FY+ + RGTPLLVQ+ +I+Y + Sbjct: 67 TLIISFFSLLLSIILG---GVFCAFSLSSIIFLRFLSTFYIELIRGTPLLVQVLLIYYII 123 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + + + +VA +I L+ +AY++EI R+ I+SI Q +++ A+GL Q ++I Sbjct: 124 ANNLGLDNRYVAGVIILSCFSAAYLAEIFRAGILSISISQLESARALGLKEMQIFAYVIF 183 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ + PLS +F +++K +S+ S I + E+ Q+AQ I S T+ L Y LA YL+ Sbjct: 184 PQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQSAQEINSYTFATLEAYVILAITYLV 243 Query: 202 LT 203 LT Sbjct: 244 LT 245 >gi|302338912|ref|YP_003804118.1| polar amino acid ABC transporter inner membrane subunit [Spirochaeta smaragdinae DSM 11293] gi|301636097|gb|ADK81524.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 260 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 115/190 (60%), Gaps = 8/190 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS-LIMHFYVWIFRGTPLLVQLF 75 L + VTL I+ IS + S +IG + R+ S+ I++ +I YV + R TPLL+QLF Sbjct: 58 LLRGLGVTLWISLISLLFSFLIGTLTLLARL--SEGIVAPVIARLYVSLIRNTPLLIQLF 115 Query: 76 VIFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 I++ I VF+ + + I++L+L AY SEI+R +I SI KGQW+A+Y++G + Sbjct: 116 FIYF---VIAPVFNIPATPSAILALSLFEGAYTSEILRGAIFSISKGQWEAAYSLGFSSG 172 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 IILPQ + TS L+++ I+ +K +++ STI I ++ + I+S T+ I+ Sbjct: 173 DLYCRIILPQALRTSLPALANQAINTVKDSALVSTIAIYDLTMRGREIISETFLTFEIWF 232 Query: 194 ELAFVYLILT 203 +A +YL++T Sbjct: 233 TVAAIYLLIT 242 >gi|332971722|gb|EGK10670.1| amino acid ABC superfamily ATP binding cassette transporter, permease [Desmospora sp. 8437] Length = 226 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 110/216 (50%), Gaps = 20/216 (9%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D F L+ ++TL + VI L +G + + +F+ + + YV IFRGTPL Sbjct: 11 DYFITGLWITFLLTLVGVSVGSVIGLTLGL-MRLSGVFW----LRIPAKVYVDIFRGTPL 65 Query: 71 LVQLFVIFYG-LPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 L+Q+F I +P I +F FVA L+LN AYI+EI R I SI K Sbjct: 66 LLQVFFIHLAVIPTIWEDLLGAEIPSAMFSGFVA----LSLNAGAYIAEIFRGGIQSIDK 121 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ ++G++R Q +RH+ILPQ PL +EFI++LK +S+ S I + ++ A Sbjct: 122 GQMEAARSLGMSRSQAMRHVILPQAFKRMLPPLGNEFIALLKDSSLVSMIAVHDLTYAAM 181 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 T+ Y +Y ILT + ++E Sbjct: 182 TTAKNTWVRWTPYITAGMMYFILTYLLSRMVFRLEK 217 >gi|325663781|ref|ZP_08152182.1| hypothetical protein HMPREF0490_02923 [Lachnospiraceae bacterium 4_1_37FAA] gi|331087298|ref|ZP_08336367.1| hypothetical protein HMPREF0987_02670 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325470114|gb|EGC73348.1| hypothetical protein HMPREF0490_02923 [Lachnospiraceae bacterium 4_1_37FAA] gi|330408389|gb|EGG87860.1| hypothetical protein HMPREF0987_02670 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 239 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/174 (35%), Positives = 99/174 (56%), Gaps = 5/174 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHFYVWIFRGTPLLVQLF 75 + +T+ I+ + +I + IG +AV+++ I + I + Y+ I RGTP++VQL Sbjct: 33 GLKITILISIFAILIGIAIGLLVAVVKVSAVQRKELWIFNKICNIYITIIRGTPVMVQLL 92 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +I Y L ++ + + +N AY++EIIR+ I SI KGQ +A ++GL QT Sbjct: 93 II-YNLIFTSRDTNALLVGAVCFGINSGAYVAEIIRAGIESIDKGQMEAGRSLGLNYLQT 151 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 ++ II+PQ I L +EFI ++K TSVA I + ++ + AQ I S TY L Sbjct: 152 MKEIIIPQAIKNILPALGNEFIVLIKETSVAGVIAVTDLTKAAQYIGSATYDIL 205 >gi|241204561|ref|YP_002975657.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858451|gb|ACS56118.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 225 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 103/183 (56%), Gaps = 2/183 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F I++ P L + T+ ++ +SF +L +G + + + + L ++ Sbjct: 7 FRAIVEYLP-LFGQGLFTTVWLSLLSFAGALAVGIVLVAMNLQ-PARLFRLPARAFIDAV 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL QL+ +++GLP +G + V I++L+LN AYI+EIIR+ I+SI +GQ +A Sbjct: 65 RATPLLAQLYFLYFGLPRLGFILPELVVGILALSLNSGAYIAEIIRAGILSIHRGQVEAG 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A G+T Q +R +ILPQ + PL + I ++K +++ S I++ E+ + Q + S Sbjct: 125 IASGMTFIQRMRFVILPQAFKVTIPPLLGQAIVLVKDSALLSLISVAELTRAGQLLASDR 184 Query: 186 YQP 188 + P Sbjct: 185 FMP 187 >gi|27367226|ref|NP_762753.1| arginine transporter permease subunit ArtM [Vibrio vulnificus CMCP6] gi|27358794|gb|AAO07743.1| Arginine ABC transporter, permease protein ArtM [Vibrio vulnificus CMCP6] Length = 222 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 65/217 (29%), Positives = 112/217 (51%), Gaps = 25/217 (11%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTIISLIMHFYVWIFRGTP 69 L +V +L + +S ++ I+ + I +FS +I+L F GTP Sbjct: 9 LLEGLVTSLELTAVSLLVGCILSLLMTATLILRTPLLHWFSRGVITL--------FTGTP 60 Query: 70 LLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIISIPKG 120 LLVQ+F+I+YG + DSFV +++L LN +AY +++ + + +IP G Sbjct: 61 LLVQIFLIYYGPGQFDAIRDSFVWQWLSQPWFCAMLALALNTAAYSTQLFKGAFNAIPSG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW A A+G+ + T++ ++LP + + S+E I + K TS+ASTITI ++ AQR Sbjct: 121 QWQACRALGMNKLVTLK-VLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYAQR 179 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 I + TY L ++ YL + + +I ++E Sbjct: 180 INAQTYDTLTVFGVAGAFYLTINAIMTLIFRQVEKKA 216 >gi|228937879|ref|ZP_04100507.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970760|ref|ZP_04131400.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228788885|gb|EEM36824.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821785|gb|EEM67785.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938357|gb|AEA14253.1| glutamine transport system permease protein glnP [Bacillus thuringiensis serovar chinensis CT-43] Length = 218 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ + +V R PL++ F+ ++ LP IGI Sbjct: 25 SVIALIGSFILGVILAVMRIA-PIRILNWVGSAFVEFVRNIPLVLIAFIFYFALPVIGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + H++LPQ + Sbjct: 84 LNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQAMYHVVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|77459313|ref|YP_348820.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77383316|gb|ABA74829.1| amino acid ABC transporter membrane protein 1, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 220 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/158 (34%), Positives = 91/158 (57%), Gaps = 1/158 (0%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 +S I +IG +A + + ++ YV + R TP+LV + +I++ LP +GI D Sbjct: 30 VSIAIGCVIGLLMA-FALLSRHRALRVLASVYVTVIRNTPILVLILLIYFALPSLGIRLD 88 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 + II+L+L AY++E+ R ++SIPKGQ +A AIGL Q ++ +P + Sbjct: 89 KIPSFIITLSLYAGAYLTEVFRGGLLSIPKGQREAGLAIGLGEWQVKAYVTVPVMLRNVL 148 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 LS+ FIS+ K TS+A+ I +PE+ A++I +Y+ Sbjct: 149 PALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYR 186 >gi|307132038|ref|YP_003884054.1| glutamine transport system permease [Dickeya dadantii 3937] gi|306529567|gb|ADM99497.1| Glutamine transport system permease protein [Dickeya dadantii 3937] Length = 233 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/220 (30%), Positives = 116/220 (52%), Gaps = 11/220 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L I TL + F +LIIG +AV+R ++ + F V++FR P+L+ +F+ Sbjct: 13 LLEGIANTLMVTLTCFTSALIIGLTVAVLRRLAFPSM-KKALDFLVFVFRSIPVLIAVFL 71 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GLP G+ +A+ IS+ L Y++E+ R ++ + + + A+ A GL++ Q I Sbjct: 72 VYFGLPATGLSISPLLAMNISIGLISGGYLAEVFRGALQLVEQSEITAAKAAGLSKLQII 131 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 RHI +PQ S + +EF S+LKS+ A T+ I EI + A + +TT L+IY Sbjct: 132 RHIEIPQMFRFSVPGILNEFSSVLKSSPFAYTVGISEITKQAMSLTATTMNGLVIYTLAG 191 Query: 197 FVYL------ILTSFCYIIQIKIESSVTQ----HTYSVDK 226 +Y ILT+ I++K+ + Y +D+ Sbjct: 192 ILYFLIYKLSILTAKQLEIKLKMTGDELEKIKVKMYGIDR 231 >gi|304405143|ref|ZP_07386803.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] gi|304346022|gb|EFM11856.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] Length = 495 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/199 (30%), Positives = 112/199 (56%), Gaps = 22/199 (11%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 ++S ++GF I F + + + F Y +FRGTPLL+QLF+I+Y P + FD Sbjct: 303 LVSALLGFVWGSILSLFKISSVRPLQWFATVYTSVFRGTPLLLQLFIIYYATPQL---FD 359 Query: 90 ----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTI 145 + +A ++ LN +AY+SE IR I+++ +GQ +A+ A+G+ + +R IILPQ + Sbjct: 360 YDIPALLAAGLAFGLNSAAYLSETIRGGIMAVDRGQREAAMALGIPYRTMMRSIILPQAV 419 Query: 146 TTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL--------IIYCELAF 197 L +E +++LK +S+ S I + ++ + A + ++T++ I YC Sbjct: 420 KNILPALVNECVALLKESSLVSVIGVQDLMRRANVVQASTFRAFEALLFAGAIYYC---- 475 Query: 198 VYLILTSFCYIIQIKIESS 216 + LILTS ++++ ++ S Sbjct: 476 LVLILTSLAHLLERRLRRS 494 >gi|167756843|ref|ZP_02428970.1| hypothetical protein CLORAM_02392 [Clostridium ramosum DSM 1402] gi|167703018|gb|EDS17597.1| hypothetical protein CLORAM_02392 [Clostridium ramosum DSM 1402] Length = 226 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 114/215 (53%), Gaps = 9/215 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D+ LL A L AC F LI+G A +I I+ LI + YV + RGTP+ Sbjct: 11 DNLIFLLQGAGKSLLLAACALF-FGLILGVLGAAAKIS-KHKILRLIGNVYVELIRGTPM 68 Query: 71 LVQLFVIFYGLPHI-----GIVF--DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 L+Q+ ++ P + G F D +V I++++N AY +E+IRS I+ + KGQW+ Sbjct: 69 LLQILFLYIAFPLLMRSITGERFIPDPYVCGAIAMSINSGAYSTELIRSGIMGVDKGQWE 128 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A +GL QT++ IILPQ P+ SEFI+++K +S+ S + E+ +AQ + + Sbjct: 129 ACEVLGLNYTQTMKLIILPQAFKRIIPPIVSEFITLIKDSSLISVLGATELLYSAQILGA 188 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 T+ + A +YLI+T KIE ++ Sbjct: 189 NTFNLIPPLLASAVLYLIMTLTTSYFARKIERRLS 223 >gi|327478628|gb|AEA81938.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166] Length = 219 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/179 (33%), Positives = 101/179 (56%), Gaps = 10/179 (5%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLIMHFYVWIFRGT 68 P+LL A++ T+ IA F I++++G F+A+ R + S + LI R T Sbjct: 13 LPRLLDASLT-TIGIALAGFAIAVVLGLFLAIGRRSRHRWLSWPVTGLIE-----FIRST 66 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+Q++ +FY P+ G+ + A II + L+++ Y +E+ R+ + ++P+ QW+A A+ Sbjct: 67 PLLIQVYFLFYVFPNYGLNLSAMQAGIIGIALHYACYTAEVYRAGLDAVPRSQWEAVTAL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 + R +ILPQ + L + ISILK T V S IT+ EI Q A+ I S +++ Sbjct: 127 NMKPWTAYRDVILPQALRPVLPALGNYLISILKDTPVLSAITVVEIMQRAKNIGSESFR 185 >gi|302130067|ref|ZP_07256057.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 277 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 123/217 (56%), Gaps = 10/217 (4%) Query: 8 LIIDSFPQLL---------YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 +I+D P L+ +TL ++ V+S+++GF A+ R+ S + I Sbjct: 52 IILDKLPNLIGLHLAPNGFLQGAALTLFVSVCLIVVSVLLGFVTALARLS-SSAVAFGIA 110 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 FY FRGTPLL+Q+ +I+ GLP +GIV + A +I+L+LN+ AY+SEI R+ II + Sbjct: 111 SFYASFFRGTPLLIQILLIYLGLPQLGIVPGAIAAGVIALSLNYGAYLSEIFRAGIIGVA 170 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +A+ A+ L Q + LPQ + T P +++FIS+LK +S+ S + + E+ A Sbjct: 171 AGQREAALALALRPTQIFWRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLA 230 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q ++Y+ + + A +Y I++ ++Q ++E Sbjct: 231 QSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLEK 267 >gi|170742607|ref|YP_001771262.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168196881|gb|ACA18828.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 238 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 92/161 (57%), Gaps = 10/161 (6%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF----------DSFVAIIISLTLNFS 103 +SL+ YV++FRGTPLLVQLF+I+YGL + + + +L+LN Sbjct: 50 LSLLSRAYVFVFRGTPLLVQLFLIYYGLGQFRQDLQALNLWWFFREPYWCALFALSLNTG 109 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AY +EI+R ++++P G A A G++R + + LP + +E I ++KST Sbjct: 110 AYTAEIVRGGVLAVPHGALLAGRACGMSRLTLLSRVTLPLAARQALPAYGNEVILVVKST 169 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 ++ASTITI E+ AQ++++ +++ L I+C A YL S Sbjct: 170 ALASTITIMEVTGIAQKLIAQSFRALEIFCCAAAFYLAAVS 210 >gi|222086235|ref|YP_002544767.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221723683|gb|ACM26839.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 276 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/227 (29%), Positives = 120/227 (52%), Gaps = 12/227 (5%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W N F + +T+ + SF++ I+ +A+ R+ S + SL + YV+ Sbjct: 49 NWDNAKFFKFGPRFLHGLWITVTLVGYSFILGAILSIPLALARMSKSKILNSLT-YGYVY 107 Query: 64 IFRGTPLLVQLFVIFYGLP-------HIGIVF---DSFVAIIISLTLNFSAYISEIIRSS 113 +FRGTPLL Q+F+++YG P +IG+ + D F + ++TLN +AY +EI+R + Sbjct: 108 LFRGTPLLAQIFIVYYGFPQARGFLDYIGLWWFFRDPFNCGLFAITLNTAAYQAEIVRGA 167 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I S+ +GQ +A+ ++GL + T +I+PQ + + P +E I ++KS++ S IT+ + Sbjct: 168 IQSVHRGQSEAAASLGLHKLVTFYKVIMPQALIVALRPYGNEIILLIKSSATVSIITVYD 227 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + + S TY Y A YL + ++E +T+H Sbjct: 228 LMGETRYAFSQTYD-YQAYLWAAIFYLSIVEVMRNGWARMEGYLTRH 273 >gi|257092716|ref|YP_003166357.1| polar amino acid ABC transporter inner membrane subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045240|gb|ACV34428.1| polar amino acid ABC transporter, inner membrane subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 245 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/199 (30%), Positives = 112/199 (56%), Gaps = 13/199 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ VT+ ++ ++ I+L++G + ++R + +S YV +FR PLLVQLF+ Sbjct: 25 MFYGFKVTIALSLSAWFIALVLGAVVGILRTV-PNKWLSGFATAYVEVFRNIPLLVQLFL 83 Query: 77 IFYGLP-----HIGIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 ++ +P ++G F F++ ++ L L SA ++E +RS I S+P GQ +A Sbjct: 84 WYFVMPELLPENLGNAFKQSNPIVQQFLSSMVCLALFTSARVAEQVRSGINSLPPGQKNA 143 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+G T QT R+++LP + PL+SEF++I K+++V STI + E+ +++V Sbjct: 144 GLAMGFTLSQTYRYVLLPMAVRLIVPPLTSEFLNIFKNSAVCSTIGLLELAAQGRQLVDY 203 Query: 185 TYQPLIIYCELAFVYLILT 203 T QP + + YL++ Sbjct: 204 TAQPYESFIAVTLAYLLIN 222 >gi|149907743|ref|ZP_01896490.1| arginine ABC transporter, permease protein [Moritella sp. PE36] gi|149809413|gb|EDM69342.1| arginine ABC transporter, permease protein [Moritella sp. PE36] Length = 221 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 119/222 (53%), Gaps = 18/222 (8%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI-RIFFSDTI--ISLIMHFYVWI 64 + +D F LL+ + TL I SL+ G IAV+ + + I ++L+ + + Sbjct: 1 MTLDHF-WLLFNGLSTTLEIT----FFSLLFGSMIAVLLTLAMINKIPGLNLLARAIILV 55 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSII 115 F GTPLL+Q+F+++ G + DSF + II+L+ N +AY S + + +I Sbjct: 56 FTGTPLLIQIFLVYSGPSQFEWIKDSFLWDYLRQAKICAIIALSFNTAAYSSLLFKGAIE 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+P+G+WDA A+G+ R+QT+ +I+P I S+E I +LK TS+AS+ITI ++ Sbjct: 116 SVPRGEWDACNALGMNRRQTL-AVIVPHAIRRVLPSYSNEVILVLKGTSLASSITIMDVM 174 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 A +I TY L+ + +YL + +I ++E Sbjct: 175 GYANQINGQTYDALMAFSAAGIIYLGMNGILILIFKQLEKKA 216 >gi|209546611|ref|YP_002278529.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537855|gb|ACI57789.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 229 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 22/204 (10%) Query: 33 VISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYG----LPHIG 85 VIS++ GF IA+ F + L+ Y FRGTPLL+QL++++YG LP + Sbjct: 25 VISVVFGFIIAIGLAFAQVSGGRLTRLLARGYCTFFRGTPLLIQLWLLYYGVGSLLPMVP 84 Query: 86 ---------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 I+ + F +S TLN++AY +E++R +++++PKG+ +A A GL+ + + Sbjct: 85 GIRQSLFWPILREGFFFAAVSFTLNYAAYEAEVLRGALLAVPKGELEAGRAFGLSPLKLV 144 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPLIIYC 193 R I LP+ I + ++ E + LK+T +A T+T+ +++ A ++ T Y+PL++ Sbjct: 145 RRIWLPRAIRIALPTIAGEIVMQLKATPLAFTVTVMDLYAVANKVRQDTLLVYEPLLV-- 202 Query: 194 ELAFVYLILTSFCYIIQIKIESSV 217 + YL+LT+ + +E+ V Sbjct: 203 -VTVFYLVLTAVIARVFRGLEAQV 225 >gi|332685792|ref|YP_004455566.1| amino acid ABC transporter glutamine-binding protein/permease [Melissococcus plutonius ATCC 35311] gi|332369801|dbj|BAK20757.1| amino acid ABC transporter, glutamine-binding protein/permease protein [Melissococcus plutonius ATCC 35311] Length = 531 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/151 (37%), Positives = 90/151 (59%), Gaps = 1/151 (0%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRS 112 ++ ++ Y+ IFRGTP++VQ VI+YG GI + +A ++ +++N AY+SEI+R Sbjct: 340 VNALLFAYIEIFRGTPMIVQAAVIYYGSAQAFGIDVNRTLAALVIVSVNTGAYMSEIVRG 399 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I +I GQ++A+ AIG+T QT+ +ILPQ I +EF+ +K TSV S I++ Sbjct: 400 GIFAIDSGQFEAAQAIGMTHGQTMCKVILPQVIRNIMPATGNEFVINIKDTSVLSIISVS 459 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F + TYQ Y + +Y I+T Sbjct: 460 ELFFQGKSAAGATYQFFPTYFIICVIYFIMT 490 >gi|328958164|ref|YP_004375550.1| high affinity arginine ABC transporter [Carnobacterium sp. 17-4] gi|328674488|gb|AEB30534.1| high affinity arginine ABC transporter [Carnobacterium sp. 17-4] Length = 473 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 121/217 (55%), Gaps = 7/217 (3%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 +F LI + +LL + TL + ISF I+ I G + + + +++ I YV I Sbjct: 259 FFGLIQQNGGELL-KGLGRTLLLTIISFAIATIFGVILGLFNAS-PNKVLNWIATIYVDI 316 Query: 65 FRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RG PL+V F I++ +P + I +++A +I+L+LN +AYI+E++R I ++ GQ + Sbjct: 317 LRGIPLIVLAFFIYFSIPQFLSIQIPAYIAGVITLSLNTTAYIAELVRGGIQAVDTGQLE 376 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AS ++GLT ++R ++LPQ + ++F+ LK TS+ S I I E+ QT + I++ Sbjct: 377 ASRSLGLTYNTSMRKVVLPQAVKIMIPSFINQFVITLKDTSILSVIGIVELTQTGKIIIA 436 Query: 184 TTYQPLIIYCELAFVYL----ILTSFCYIIQIKIESS 216 TY ++ + +Y+ ILT F I+ + + Sbjct: 437 RTYSSGDMWLIVGLMYIIIITILTKFSNYIERRTSND 473 >gi|307706282|ref|ZP_07643095.1| amino ABC transporter, permease protein His/Glu/Gln/Arg/opine family [Streptococcus mitis SK321] gi|307618315|gb|EFN97469.1| amino ABC transporter, permease protein His/Glu/Gln/Arg/opine family [Streptococcus mitis SK321] Length = 226 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/194 (31%), Positives = 107/194 (55%), Gaps = 1/194 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A ++TL IA + S ++G +++IR + TI++ + Y+ + R T Sbjct: 5 IVEQYLPLYQKAFLLTLHIAVWGILGSFLLGLIVSIIR-HYRITILAQVATAYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IGIV S V + L +Y++E RS + ++ + Q + AI Sbjct: 64 PLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAVSQTQQEIGLAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q R+++LPQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183 Query: 189 LIIYCELAFVYLIL 202 I L YLI+ Sbjct: 184 DIALAMLVVAYLIM 197 >gi|116255125|ref|YP_770959.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259773|emb|CAK02865.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 313 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 71/241 (29%), Positives = 127/241 (52%), Gaps = 32/241 (13%) Query: 6 FN-LIIDSFPQ-LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 FN LI+D Q +L A+V+ L +G IA + + ++S+ +VW Sbjct: 63 FNPLILDGLWQTVLITAVVMAL----------ATLGGTIAALMMLSPSKLLSVPAAAFVW 112 Query: 64 IFRGTPLLVQLFVIFYGL-----------PHIGIVFD--------SFVAIIISLTLNFSA 104 FRGTP LVQL +I+Y L P +G V+ V+ I++L+L+ + Sbjct: 113 FFRGTPALVQL-IIWYNLSIVVKDITLWLPGVGTVYSVSTNDIMTPLVSAIVALSLHEAG 171 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 Y++EI+RS + S+ KGQ++AS +G+ +R I+LPQ + P +E I++LK+TS Sbjct: 172 YMAEIVRSGLKSVNKGQYEASACLGMNPSLALRRIVLPQAMRIIIPPTGNETINLLKTTS 231 Query: 165 VASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 + S I + ++ +AQ I + T++ + + ++F YL + S Q +E ++ + + Sbjct: 232 LVSIIAVGDLLYSAQSIYARTFETIPLLLVVSFWYLAVVSIMSGGQFYLEKHFSRDEHRI 291 Query: 225 D 225 + Sbjct: 292 N 292 >gi|328555066|gb|AEB25558.1| L-cystine transport system permease protein TcyM [Bacillus amyloliquefaciens TA208] gi|328913423|gb|AEB65019.1| L-cystine transport system permease protein TcyM [Bacillus amyloliquefaciens LL3] Length = 235 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 18/197 (9%) Query: 24 TLPIACISFVISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 T+P+ VI +I GFFIA+ +R+F + + FYV FR TP ++ + +I+ Sbjct: 18 TVPLTLAMTVIPIIAGFFIALGNITVRVFRIKWLFAF-SAFYVSFFRSTPAILHIMLIYL 76 Query: 80 GLP----------HIGIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G+P H+G + V +I++L+L AY++EI+RS I+++ GQ +A+Y Sbjct: 77 GVPLIADHFSREFHLGWSANQIPVAVFVIMALSLTAGAYMTEILRSGIMAVDTGQAEAAY 136 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +IGLTR Q IR +ILPQ S ++ I L +TS+A+ + +PEI TA S Y Sbjct: 137 SIGLTRGQMIRRVILPQAFMISLPNFTNIGIGFLHTTSIAAIVAVPEITGTATIAASDNY 196 Query: 187 QPLIIYCELAFVYLILT 203 L + A +Y LT Sbjct: 197 AFLEAFIGAAVIYWGLT 213 >gi|150396799|ref|YP_001327266.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150028314|gb|ABR60431.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 276 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 120/217 (55%), Gaps = 13/217 (5%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P L + + VTL + S ++ ++ +A+ R+ + + + + YV+ FRGTPL+ Q Sbjct: 60 PNFL-SGLGVTLTLVTASILMGAVVSLPVALGRMS-KNRLWGWLAYAYVYFFRGTPLITQ 117 Query: 74 LFVIFYGLPH-------IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 LF+I+YGL +G+ + D++ + + TLN +AY +EI+R +I S+P+GQ + Sbjct: 118 LFLIYYGLGSFRPQLETVGLWWFFRDAWNCALFTFTLNTAAYQAEILRGAIESVPRGQRE 177 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 + A+GL + +ILPQ + + P +E I ++K +++ + +T+ ++ +R S Sbjct: 178 GAAALGLPDRIAFFKVILPQAMIVALRPYGNEIILMIKGSAIVAIVTVFDLMGETRRAFS 237 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T+ +Y A +YL++ + +E+ +T+H Sbjct: 238 RTFD-YQMYIWAAILYLLMVELLRNVWGWLEARLTRH 273 >gi|332297625|ref|YP_004439547.1| polar amino acid ABC transporter, inner membrane subunit [Treponema brennaborense DSM 12168] gi|332180728|gb|AEE16416.1| polar amino acid ABC transporter, inner membrane subunit [Treponema brennaborense DSM 12168] Length = 211 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 105/182 (57%), Gaps = 4/182 (2%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 +V+L I ++ + SL +G A R+ + ++S+ ++ I RGTPL++QL +++ Sbjct: 13 LVSLKIFFLTLLFSLPLGLPFAAARMS-KNPVLSVPAKLFMLIIRGTPLILQLIFVYFA- 70 Query: 82 PH--IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 P+ I ++ F A II++++N++AY +EI R I S+ KGQ++A +G TR QT I Sbjct: 71 PYYLFKISYNRFTAAIIAMSVNYAAYFAEIYRGGIESVSKGQYEAGKVLGFTRLQTFFRI 130 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ I +E I+++K T++A I + E+F+ AQ S + + I+ F + Sbjct: 131 VLPQVIKRILPATGNEVITLVKDTALAQVIGVAELFRVAQNAASREFSTMPIFVAGVFYF 190 Query: 200 LI 201 + Sbjct: 191 FM 192 >gi|221198891|ref|ZP_03571936.1| octopine transport system permease protein OccM [Burkholderia multivorans CGD2M] gi|221205151|ref|ZP_03578167.1| octopine transport system permease protein OccM [Burkholderia multivorans CGD2] gi|221174942|gb|EEE07373.1| octopine transport system permease protein OccM [Burkholderia multivorans CGD2] gi|221181342|gb|EEE13744.1| octopine transport system permease protein OccM [Burkholderia multivorans CGD2M] Length = 257 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 124/224 (55%), Gaps = 11/224 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++D+ QLL AA+ TL + S V+ ++ I +R+ + + Y+ +F Sbjct: 5 FGFLLDTLRQLL-AAVPTTLGLFFASLVLGGLLSLVIVTMRVS-PHWLPNRFARAYILVF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIIS 116 RG+PLL+Q+F+++YGL G++ +SF V ++SL L + Y +EI+R +++ Sbjct: 63 RGSPLLIQMFLVYYGLGQFGVIRESFMWPLLREPYVCAVLSLALCTAGYTAEILRGGLMA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P GQ +A Y+IGL+ +R +I P + S+E + ++KST++AS +T+ E+ Sbjct: 123 VPVGQIEAGYSIGLSGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 AQ+I+ TY+ ++ A +YL L + +E ++ H Sbjct: 183 VAQQIIQQTYRTTEVFVCAAVIYLGLNFIVVRLLGALEWRLSAH 226 >gi|83593588|ref|YP_427340.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC 11170] gi|83576502|gb|ABC23053.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170] Length = 239 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 121/225 (53%), Gaps = 11/225 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +L+ P+LL+ + VTL + ++ I + I A++R+ S ++ + +++ F Sbjct: 3 LDLVATFLPKLLFEGLPVTLKLVTLAVAIGVFIAIPTALLRVHPSP-LVRAFPYAFIFFF 61 Query: 66 RGTPLLVQLFVIFYGL---PHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSII 115 RGTPLL+Q+ +++YGL P I I+ + F +I+ LN AY +EI+R +I Sbjct: 62 RGTPLLIQIALVYYGLSTLPWIRENEVLWPILREPFWCALIAFALNTGAYSAEILRGAIQ 121 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +IP+G+ +A+ A G+ +R IILP+ +E I ILK +++AS+IT+ +I Sbjct: 122 AIPRGEVEAARAYGMRGLLIVRRIILPRAFQIGLPAYGNEIILILKGSALASSITLLDIT 181 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 A+ + + Y P+ + +YLIL IE +++H Sbjct: 182 GVARLLYARYYTPVEAFVTAGVIYLILVYLLTRGLRLIERRLSRH 226 >gi|315640806|ref|ZP_07895906.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] gi|315483418|gb|EFU73914.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] Length = 218 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 113/198 (57%), Gaps = 5/198 (2%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L ++VT+ ++ +S ++S + G + +R F + +S I+ V I R PLL+ + Sbjct: 13 RFLLDGLIVTIEVSLVSIILSFLFGAIMGTLR-FSAIPFVSRIVGLIVDIIRNLPLLLII 71 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F ++ LP IGI FD F + +I+LT+ SA +SEI R+ + ++PKGQ +A + GLT Q Sbjct: 72 FFTYFALPQIGIKFDIFWSAVIALTIFESAMLSEIFRAGLNAVPKGQMEAGLSTGLTYLQ 131 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI-IYC 193 + I++PQ + + S+ IS++K TS+A I++PE A+ I +I +Y Sbjct: 132 VMFSIMIPQAFRSMVPAIVSQLISLVKDTSLAVIISLPEFTHNAKIIYGQNSNYVIPMYV 191 Query: 194 ELAFVYLILTSFCYIIQI 211 L Y ++ CY++ + Sbjct: 192 ALTLGYFVI---CYLLSL 206 >gi|262277192|ref|ZP_06054985.1| ABC transporter permease component [alpha proteobacterium HIMB114] gi|262224295|gb|EEY74754.1| ABC transporter permease component [alpha proteobacterium HIMB114] Length = 243 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/144 (40%), Positives = 90/144 (62%), Gaps = 1/144 (0%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISE 108 + I++ I YV I R PLLV + I+YGLP GI F FV+ II+L+++ SA+ +E Sbjct: 72 KNKILTYINIGYVEIVRAIPLLVLILWIYYGLPIMTGISFSPFVSGIIALSISESAFQAE 131 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I R+ I SI K QW+A ++GL + +R +ILPQ I + ++F+ +LK +S+ S Sbjct: 132 IFRAGINSIKKSQWEAGSSLGLNFYRILRLVILPQAIKNILPAIGNQFVYVLKMSSLVSI 191 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIY 192 I I ++ + A +V TTY+PL IY Sbjct: 192 IGIGDLTRKANELVVTTYRPLEIY 215 >gi|50123003|ref|YP_052170.1| octopine transport system permease [Pectobacterium atrosepticum SCRI1043] gi|49613529|emb|CAG76980.1| octopine transport system permease protein [Pectobacterium atrosepticum SCRI1043] Length = 244 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 114/212 (53%), Gaps = 12/212 (5%) Query: 21 IVVTLPIACISFVISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 I+ +P+ + S+ +GFF+A+ + S ++ I YV FRGTPLLVQLF+I Sbjct: 13 IIPGIPLTLQLAISSVFLGFFLALGLALMQLSSFAVLRSIARTYVLFFRGTPLLVQLFLI 72 Query: 78 FYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +YGL V +S + ++SL+L AY SEIIR + S+P GQ +++ A Sbjct: 73 YYGLGQFPWVRESILWPFLREPQWCALLSLSLCTGAYASEIIRGGLQSVPVGQIESARAC 132 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+ + I+ P I + +E IS++KSTS+AS IT+ EI A R+++ TY+ Sbjct: 133 GMPSFMIFKRIVFPLAIRQALPAYGNELISMVKSTSLASIITLMEITGIAARLIAETYRA 192 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 L ++ +YL + + + E ++T H Sbjct: 193 LEVFLVAGAIYLFINLILTRLLMWTEFTLTPH 224 >gi|205375469|ref|ZP_03228257.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus coahuilensis m4-4] Length = 219 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 63/192 (32%), Positives = 114/192 (59%), Gaps = 8/192 (4%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIFYGLPHI-GIVF 88 V+S GF + +I FF + I + F Y IFRGTPL++Q+ +I++ P + Sbjct: 27 VLSTFFGFLLGIILAFFKISTIKPLKWFGIAYTSIFRGTPLILQIALIYFATPQLLRYDI 86 Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 D +A +I+ LN +AYISE IR I+++ KGQ +A+ ++G+ ++ + HI++PQ + Sbjct: 87 DPLLAGVIAFALNSAAYISETIRGGILAVDKGQREAAMSLGVPYRKMMWHIVMPQAVKKI 146 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPLIIYCELAFVY-LILTS 204 L++E I++LK +++ STI ++ + A + S T ++PLI+ + +V LILTS Sbjct: 147 LPALANESIALLKESALVSTIGAMDLLRRATIVSSKTFLYFEPLILVGGIFYVMVLILTS 206 Query: 205 FCYIIQIKIESS 216 ++ +++ S Sbjct: 207 GARYLERRMQVS 218 >gi|86360357|ref|YP_472245.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42] gi|86284459|gb|ABC93518.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 234 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 65/224 (29%), Positives = 123/224 (54%), Gaps = 16/224 (7%) Query: 19 AAIVVTL----PIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLL 71 A+ +VTL P I F +S+ G +A++ + + +S Y+++FRG+PLL Sbjct: 7 ASTMVTLLKAVPTTLILFSLSIFFGGLLALVIVTMRVSGNRYLSGFAKGYIFVFRGSPLL 66 Query: 72 VQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +Q+F++FYGL G++ SF V I+SL L + Y +EI R I ++ + Sbjct: 67 IQMFLVFYGLGQFGVIRYSFLWPFLREPMVCAILSLALCTAGYTAEIFRGGIRAVSPKEI 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ +IG++ +R I+ P + S+E + ++KST++AS +T+ E+ AQR++ Sbjct: 127 EAARSIGMSGFLLVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLI 186 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 S TY+ + ++ A +YL+L +E S+++H ++ + Sbjct: 187 SQTYRTMEVFLCAAIIYLVLNFIILQGMALLEYSLSRHRRAIPQ 230 >gi|190895403|ref|YP_001985695.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|190699348|gb|ACE93432.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 234 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 123/224 (54%), Gaps = 16/224 (7%) Query: 19 AAIVVTL----PIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLL 71 A+ +VTL P I F +S+ G +A++ + + +S Y+++FRG+PLL Sbjct: 7 ASTMVTLLKAVPTTLILFSLSIFFGGLLALVIVTMRVSGNRYLSGFAKGYIFVFRGSPLL 66 Query: 72 VQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +Q+F++FYGL G++ SF V ++SL L + Y +EI R I ++ + Sbjct: 67 IQMFLVFYGLGQFGVIRYSFIWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRAVSPKEI 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ +IG++ +R I+ P + S+E + ++KST++AS +T+ E+ AQR++ Sbjct: 127 EAARSIGMSGFLMVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLI 186 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 S TY+ + ++ A +YL+L +E S+++H ++ + Sbjct: 187 SQTYRTMEVFLCAAIIYLVLNFIILQGMALLEYSLSRHRRAIPQ 230 >gi|149181553|ref|ZP_01860048.1| ABC transporter (permease) [Bacillus sp. SG-1] gi|148850803|gb|EDL64958.1| ABC transporter (permease) [Bacillus sp. SG-1] Length = 219 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/165 (35%), Positives = 100/165 (60%), Gaps = 7/165 (4%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIFYGLPHI-GIVF 88 ++S I+GF I + F I ++ F Y IFRGTPL++QL +I++ P + G Sbjct: 27 LLSGIVGFIIGTVLSLFKIGRIKVLKWFADAYTSIFRGTPLILQLMLIYFATPQLTGFDI 86 Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 F+A +++ LN AYISEIIR+ I ++ KGQ +A+ A+G++ + ++ IILPQ + Sbjct: 87 PPFLAGMLAFGLNSGAYISEIIRAGIQAVDKGQQEAAEALGISYRPMMKDIILPQALKNI 146 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY---QPLI 190 L +E+I++ K +++ STI +I + +Q + + TY +PLI Sbjct: 147 LPALMNEYITLTKESAIVSTIGFLDIMRRSQIVSANTYTAFEPLI 191 >gi|148975203|ref|ZP_01812127.1| putative amino acid ABC transporter, permease protein [Vibrionales bacterium SWAT-3] gi|145965127|gb|EDK30377.1| putative amino acid ABC transporter, permease protein [Vibrionales bacterium SWAT-3] Length = 253 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/189 (32%), Positives = 105/189 (55%), Gaps = 2/189 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L A T+ ++ +S ++ +G +A S I+ I YV + R P+LV L Sbjct: 46 QFLMAGFSETIQVSLLSMFFAMALGLLVA-FPALSSSPILRGINRLYVEVMRSIPVLVLL 104 Query: 75 FVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 ++YG+P + + + F A +I+LT+ SA+++E+ R I +I +GQ +A+ ++GLT Sbjct: 105 LWVYYGMPTLLDVSLNHFWAGVIALTIAESAFMAEVFRGGIQAINRGQHEAAESLGLTYW 164 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q +R +ILP PL ++F+ ILK +S+ S I + ++ + A +V Y PL IY Sbjct: 165 QKMRLVILPLAFRQILPPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIYT 224 Query: 194 ELAFVYLIL 202 L YL+L Sbjct: 225 FLVLEYLVL 233 >gi|323465692|gb|ADX69379.1| Glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus H10] Length = 494 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 110/187 (58%), Gaps = 7/187 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I T+ I S +I +++G +A++R+ + ++ I Y+ RGTP +VQ+ +++ Sbjct: 294 GIEYTIIITVFSVLIGIVLGMLLALMRLS-KNKLLHWIAVCYIEFIRGTPQMVQILFVYF 352 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G+ + + VA II++ LN AY++E IRS I S+ KGQ +A+ ++GL++ + R++ Sbjct: 353 GVGALISNLSALVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLGLSQAKAYRYV 412 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCELA 196 I+PQ + L +EFI++LK +S+ S I + E+ + I ++TY+ PL I Sbjct: 413 IIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGVLPLFIAM--- 469 Query: 197 FVYLILT 203 +Y I+T Sbjct: 470 IIYFIMT 476 >gi|159037030|ref|YP_001536283.1| polar amino acid ABC transporter, inner membrane subunit [Salinispora arenicola CNS-205] gi|157915865|gb|ABV97292.1| polar amino acid ABC transporter, inner membrane subunit [Salinispora arenicola CNS-205] Length = 325 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 110/218 (50%), Gaps = 25/218 (11%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFS---------------------DTIISLIMHFYV 62 TL A ++ + SL++G +AV+RI + +S++ F V Sbjct: 79 TLTAAVLAILTSLVVGTLLAVLRIQLKGLAQRRYTGLSAPLAYLLRGLNLTLSVVTRFCV 138 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +FRG P+++ +F + G P G+ FD+ ++I LT+ S I+EI+RS + +P GQ Sbjct: 139 EVFRGLPVVITIFFVARGFPEFGVTFDTLWYLVIGLTIYNSVVIAEILRSGMEGLPGGQA 198 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ AIGL+ QT R I+LPQ L S+ + +LK TS+ I+ E ++I+ Sbjct: 199 EAAAAIGLSPLQTTRMIMLPQAFRIMLPALISQLVVVLKDTSLGFIISYEETLNIGKQII 258 Query: 183 STTYQPLIIYCELAFVYLI----LTSFCYIIQIKIESS 216 P+ +Y LA ++++ L+ +Q ++ Sbjct: 259 GVLDNPIQVYTVLAVLFIVVNYSLSKLAQAVQNRLSRG 296 >gi|84489758|ref|YP_447990.1| polar amino acid ABC transporter permease [Methanosphaera stadtmanae DSM 3091] gi|84373077|gb|ABC57347.1| predicted ABC-type polar amino acid transport system, permease protein [Methanosphaera stadtmanae DSM 3091] Length = 216 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 118/200 (59%), Gaps = 7/200 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L ++ TL I ++ + ++ +G +A R+ I IM Y+ + RGTPL++QL V Sbjct: 10 LMGGLITTLEIFILTLLFAIPLGLVVAWGRMS-KIKPIQWIMRIYISVMRGTPLMLQLIV 68 Query: 77 IFYGLPH--IGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +F+G P+ +G+ S +A++I+ +N++AY +EI R I SIPKGQ++A+ +G T Sbjct: 69 VFFG-PYYILGVSTSSSYRLIAVLIAFIINYAAYFAEIFRGGIESIPKGQYEAAQILGYT 127 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 + +T IILPQ +++E I+++K TS++ + IPE+F A+++ ++ L + Sbjct: 128 KMETFFIIILPQVFKIVLPSITNEVITLVKDTSLSFVLAIPELFTVAKQVAASEASILAL 187 Query: 192 YCELAFVYLILTSFCYIIQI 211 + F Y++ +I+++ Sbjct: 188 FIAGIFYYILNAIVAFIMEL 207 >gi|327191403|gb|EGE58428.1| octopine ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 234 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 123/224 (54%), Gaps = 16/224 (7%) Query: 19 AAIVVTL----PIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLL 71 A+ +VTL P I F +S+ G +A++ + + +S Y+++FRG+PLL Sbjct: 7 ASTMVTLLKAVPTTLILFSLSIFFGGLLALVIVTMRVSGNRYLSGFAKGYIFVFRGSPLL 66 Query: 72 VQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +Q+F++FYGL G++ SF V ++SL L + Y +EI R I ++ + Sbjct: 67 IQMFLVFYGLGQFGVIRYSFLWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRAVSPKEI 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ +IG++ +R I+ P + S+E + ++KST++AS +T+ E+ AQR++ Sbjct: 127 EAARSIGMSGFLMVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLI 186 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 S TY+ + ++ A +YL+L +E S+++H ++ + Sbjct: 187 SQTYRTMEVFLCAAIIYLVLNFIILQGMALLEYSLSRHRRAIPQ 230 >gi|270263423|ref|ZP_06191692.1| transporter [Serratia odorifera 4Rx13] gi|270042307|gb|EFA15402.1| transporter [Serratia odorifera 4Rx13] Length = 221 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/190 (32%), Positives = 106/190 (55%), Gaps = 2/190 (1%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P+LL A ++ T+ + ++ ++ + +G A IR ++ ++S I YV + R TP +VQ Sbjct: 15 PELL-AGLLTTIELTALATLMGVALGICGAAIRSGKAN-LLSHIWGIYVEVVRNTPFVVQ 72 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LF I +GLP +G + A ++++ +N AY +EIIR+ I PKGQW+A +G +R Sbjct: 73 LFFIVFGLPSLGWKLTAGQAALLAMVINLGAYSTEIIRAGIQVTPKGQWEAGRVLGFSRS 132 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 QT I+LP ++ L S+ I ++ +SV S ++ E+ A I S T+ +Y Sbjct: 133 QTFLRIVLPPSLQRIYPALVSQCIIVMLGSSVVSQVSFEELTFAANLIQSRTFLSFEVYL 192 Query: 194 ELAFVYLILT 203 YL+L+ Sbjct: 193 VTTLFYLLLS 202 >gi|77460511|ref|YP_350018.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77384514|gb|ABA76027.1| L-arginine ABC transporter membrane protein / L-ornithine ABC transporter membrane protein [Pseudomonas fluorescens Pf0-1] Length = 232 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 114/207 (55%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N+I ++ P L + +V TL + +S L+ + ++R+ + +++ Y ++ Sbjct: 5 YNVIWEALP-LYFGGLVTTLKLLALSLFFGLLAALPLGLMRVS-KNAVVNGAAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +SF+ ++ +N SAY +EII S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFEAVRESFLWPWLSSATFCACLAFAINTSAYTAEIIAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G++R + + I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPNGEIEAAKAMGMSRVKMYKRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + Y P Y YL LT Sbjct: 183 AARTVNAQFYLPFEAYITAGVFYLCLT 209 >gi|260102749|ref|ZP_05752986.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus DSM 20075] gi|260083442|gb|EEW67562.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus DSM 20075] gi|328462015|gb|EGF34199.1| glutamine ABC transporter membrane protein [Lactobacillus helveticus MTCC 5463] Length = 217 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 116/205 (56%), Gaps = 9/205 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W ++ + L + VT+ ++ IS +S ++G + +IR + +S I+ F + Sbjct: 8 YSWVDI------RFLLQGLWVTIYVSLISIALSFVVGLILGLIR-YTKIKYVSAIVGFII 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP +GIV + A I +L + A ++EI+RS I S+ GQ Sbjct: 61 DIIRNLPLLLIIFFTYFGLPQLGIVTNPTTASIAALVIFEGAMLAEIVRSGIGSVDPGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + G++ Q + H+++PQ + L ++F+S++K TS+A+ I +PE+ AQ I Sbjct: 121 EGARSNGMSYGQAMYHVVMPQALNHMIPALLAQFVSLVKDTSLATIIVLPELLYNAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLILTSFC 206 S LI +Y +A +Y ++ FC Sbjct: 181 SQNTTYLIPMYVIIAIMYFVV-CFC 204 >gi|58336481|ref|YP_193066.1| glutamine ABC transporter permease protein [Lactobacillus acidophilus NCFM] gi|227903033|ref|ZP_04020838.1| glutamine ABC superfamily ATP binding cassette transporter permease protein [Lactobacillus acidophilus ATCC 4796] gi|58253798|gb|AAV42035.1| glutamine ABC transporter permease protein [Lactobacillus acidophilus NCFM] gi|227869207|gb|EEJ76628.1| glutamine ABC superfamily ATP binding cassette transporter permease protein [Lactobacillus acidophilus ATCC 4796] Length = 491 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 110/187 (58%), Gaps = 7/187 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I T+ I S +I +I+G +A++R+ + ++ I Y+ RGTP +VQ+ +++ Sbjct: 291 GIGYTIVITIFSVLIGIILGMLLALMRLS-KNKLLHGIAVCYIEFIRGTPQMVQILFVYF 349 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G+ + + VA II++ LN AY++E IRS I S+ KGQ +A+ ++GL++ + R++ Sbjct: 350 GVGTLISNLSALVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLGLSQAKAYRYV 409 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCELA 196 ++PQ + L +EFI++LK +S+ S I + E+ + I ++TY+ PL I Sbjct: 410 VIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGVLPLFIAM--- 466 Query: 197 FVYLILT 203 +Y I+T Sbjct: 467 IIYFIMT 473 >gi|261404062|ref|YP_003240303.1| polar amino acid ABC transporter inner membrane subunit [Paenibacillus sp. Y412MC10] gi|261280525|gb|ACX62496.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. Y412MC10] Length = 482 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 116/218 (53%), Gaps = 10/218 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---DTIISLIMHF 60 W LI++S P LL L + ++SL FF+ +I F + + I Sbjct: 268 RW-GLIVESLPSLLKG-----LGNTLLLTIVSLFFAFFLGLIFGFMKVGRNRWLRGIATV 321 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V IFRG PLLV F I++G+P G VA +++L+LN AY++EIIR I SI Sbjct: 322 FVDIFRGIPLLVLAFFIYFGIPQAFGFTMSPIVAAVLTLSLNAGAYVTEIIRGGIQSIDP 381 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ ++GL ++ + II+PQ I ++ + LK TS+ S I + E+ Q+ + Sbjct: 382 GQLEAARSLGLPYRKAMMKIIIPQAIKVMIPTFINQLVITLKDTSILSVIGLVELTQSGK 441 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 I++ T+ I+ +A +YL++ + I ++E V Sbjct: 442 IIIARTFASFDIWLVVAIMYLVVITILTKISDRLERKV 479 >gi|225420154|ref|ZP_03762457.1| hypothetical protein CLOSTASPAR_06497 [Clostridium asparagiforme DSM 15981] gi|225041211|gb|EEG51457.1| hypothetical protein CLOSTASPAR_06497 [Clostridium asparagiforme DSM 15981] Length = 219 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/172 (33%), Positives = 107/172 (62%), Gaps = 5/172 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L ++ ++ I ++ V SL +G +A R+ ++ ++ I+ Y+ + RGTPL++QL V Sbjct: 13 LMGGMLTSVQIFVVTLVFSLPLGLVVAFGRMS-ANRVVRTIVKGYISVMRGTPLMLQLMV 71 Query: 77 IFYGLPHI-GIVFDSFV---AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 +++G +I G+ S A +I +N++AY +EI RS I S+P+GQ++A+ +G +R Sbjct: 72 VYFGPYYIFGLKLGSGYRLWAALIGFVINYAAYFAEIYRSGIQSMPQGQYEAAKILGYSR 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 QT IILPQ I +++E I+++K TS+A T+++ E+F A+ + ++ Sbjct: 132 GQTFFKIILPQVIKRILPSVTNEVITLVKDTSLAFTLSVMEMFSIAKMLAAS 183 >gi|225352760|ref|ZP_03743783.1| hypothetical protein BIFPSEUDO_04390 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156367|gb|EEG69936.1| hypothetical protein BIFPSEUDO_04390 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 517 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 121/218 (55%), Gaps = 7/218 (3%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K +F L+ S P LL + TL I +SFVI+L +G ++++ + I+ + Y Sbjct: 301 KVGFFGLVKQSMPALL-TGLKNTLLITLLSFVIALALGVAFGLMKVS-ENKILRGVSKVY 358 Query: 62 VWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + +FRGTP+LV F ++G+P IG + +VA ++L+LN AY++EI+R ++ S+ G Sbjct: 359 IAVFRGTPILVWAFFFYFGVPQLIGHSVNIWVAGALTLSLNSGAYLAEIVRGAVQSVDSG 418 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q + + ++GL Q + +I+PQ + + ++ + ++K +S+ I E+ AQ+ Sbjct: 419 QMEGARSLGLNHHQAMARVIMPQATAIAMPSIINQLVIMIKDSSLLLAIGFGELLYQAQQ 478 Query: 181 IVSTTY---QPLIIYCELAFVYL-ILTSFCYIIQIKIE 214 + + + + L+I + FV + ILT I+ K+ Sbjct: 479 LYAANFRVTETLLIVGVMYFVAITILTWLANIVDRKVN 516 >gi|228977335|ref|ZP_04137730.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis Bt407] gi|228782312|gb|EEM30495.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis Bt407] Length = 206 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ + +V R PL++ F+ ++ LP IGI Sbjct: 13 SVIALIGSFILGVILAVMRIA-PIRILNWVGSAFVEFVRNIPLVLIAFIFYFALPVIGIT 71 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + H++LPQ + Sbjct: 72 LNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQAMYHVVLPQAMKI 131 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 132 VIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTKTFVTFDVYIFVGMFYLILT 187 >gi|158426029|ref|YP_001527321.1| amino acid ABC transporter, permease protein [Azorhizobium caulinodans ORS 571] gi|158332918|dbj|BAF90403.1| amino acid ABC transporter, permease protein [Azorhizobium caulinodans ORS 571] Length = 224 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 115/198 (58%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + +++P+LL A++ T+ ++ ++ I L++ A+ + + L+ YV + Sbjct: 7 FGDVFNAWPELLMGALL-TIRLSAMAMAIGLVVAVVCALGKTGGPRPVRWLV-DTYVEVI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP LVQ+F+IF+GLP +GI D+ A ++++ +N AY +EI+R+ I +I KGQ +A Sbjct: 65 RNTPFLVQIFLIFFGLPRMGIRLDANEAALLAMVVNIGAYATEIVRAGIETIHKGQIEAG 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL Q +I++ + L+S+FI ++ ++SV S I+ E+ A + + T Sbjct: 125 LALGLKPVQVFTYIVIFPALKAIYPALTSQFILLMLTSSVVSAISAEELTAIANNLQAQT 184 Query: 186 YQPLIIYCELAFVYLILT 203 ++ IY + +YL ++ Sbjct: 185 FRSFEIYIVVTAMYLAMS 202 >gi|119960912|ref|YP_949421.1| amino acid ABC transporter permease [Arthrobacter aurescens TC1] gi|119947771|gb|ABM06682.1| putative amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Arthrobacter aurescens TC1] Length = 321 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/233 (30%), Positives = 121/233 (51%), Gaps = 22/233 (9%) Query: 2 KYEWFNLIIDSF-PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++EW ++ + F Q + ++ TL + IS V+ ++GF +A++R+ S ++S+ F Sbjct: 55 RWEW-GVVAEWFTAQSVVNGLIETLKLTAISGVLGFVLGFILALMRLSASPLLVSVSWTF 113 Query: 61 YVWIFRGTPLLVQLFVIFY----------GLPHIGIVF---------DSFVAIIISLTLN 101 WIFR TPLLVQL + + G+P + F F A ++ LTLN Sbjct: 114 -SWIFRSTPLLVQLLLWYNLGYLYEKISLGIPFTDVRFFEAQTTTLISQFAAAVLGLTLN 172 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 +AY +EIIR I+S+ +GQ +A+ A+G+ + I+LPQ + +E I ++K Sbjct: 173 QAAYSAEIIRGGILSVDQGQLEAASALGIPAWKRSTRIVLPQAMRAILPNAFNEIIGLVK 232 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+ + E+F T Q I + T Q L + Y+++TS + Q IE Sbjct: 233 GTSIVYVLAYSELFYTVQVIYNRTQQVLPLLLVATLWYVVITSVLSVFQYYIE 285 >gi|126175590|ref|YP_001051739.1| polar amino acid ABC transporter inner membrane subunit [Shewanella baltica OS155] gi|125998795|gb|ABN62870.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella baltica OS155] Length = 226 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/163 (38%), Positives = 95/163 (58%), Gaps = 3/163 (1%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 + YV + RGTP++VQL VI Y + + D A II+ LN AYISEIIR+ I ++ Sbjct: 65 NLYVGVIRGTPVVVQL-VILYFIVLSALDVDKITAAIIAFGLNSGAYISEIIRAGIQAVD 123 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A+ ++GL++ T++ IILPQ I L +EFI +LK T+V I ++ + Sbjct: 124 KGQTEAARSLGLSKAMTMKSIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAG 183 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQH 220 + I S T++ + A +YL LT SF +++ K E + Q Sbjct: 184 EIIRSRTFEDSVPLFTCALIYLFLTYSFTFVLS-KFEKRLKQS 225 >gi|325964013|ref|YP_004241919.1| amino acid ABC transporter membrane protein 1, PAAT family [Arthrobacter phenanthrenivorans Sphe3] gi|323470100|gb|ADX73785.1| amino acid ABC transporter membrane protein 1, PAAT family [Arthrobacter phenanthrenivorans Sphe3] Length = 216 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 123/217 (56%), Gaps = 10/217 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVW 63 ++I+++ P L + + TL ++ +S VI+L++G +A R+ + ++ + F YV Sbjct: 2 DVILENLP-LYWEGFLRTLFLSAVSGVIALVLGTLLAAARV----SPVAALRGFSMVYVE 56 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSF-VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + R TPL + F LP +G+ F+ F VA II+L+ +A+I+E +RS + S+P GQ Sbjct: 57 VLRNTPLTIAFFFAAIVLPRLGVKFEQFEVAAIIALSTYTAAFIAEAVRSGVNSVPVGQA 116 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ +IG+ Q + IILPQ + T PL + I+++K++SVA + E+F +++ Sbjct: 117 EAARSIGMNFGQVLNLIILPQALRTVVPPLINILIALVKNSSVAGAFFVLELFGYGRQLA 176 Query: 183 STTYQPLI-IYCELAFVYLILTSFCYIIQIKIESSVT 218 + +I + AF YL+LT I+ +E V Sbjct: 177 NANGDAVIAVLLGTAFFYLLLTVPLGILASTVERKVA 213 >gi|229824368|ref|ZP_04450437.1| hypothetical protein GCWU000282_01689 [Catonella morbi ATCC 51271] gi|229786168|gb|EEP22282.1| hypothetical protein GCWU000282_01689 [Catonella morbi ATCC 51271] Length = 535 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 114/216 (52%), Gaps = 14/216 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---------IISLIMHFYVWIFRGTP 69 A +TL ++ +I L+IG + +IR + +L+++ Y+ IFRGTP Sbjct: 304 AGTGMTLWVSLTGTLIGLLIGLAVGIIRTIPKSKSQIHNGVLKVANLLLNAYIAIFRGTP 363 Query: 70 LLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 ++VQ + +YG + G A + +++N AYI+E++R I +I KGQ++A+ AI Sbjct: 364 MIVQAMIFYYGTDLLWGWKLTPMSAAFLVVSINTGAYIAEVVRGGIYAIDKGQFEAARAI 423 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+ QT++ +++PQ T + +EF+ +K TSV + I++ E++ T + I ++ Sbjct: 424 GMNHWQTMKEVVMPQVFRTILPSVGNEFVINVKDTSVLNVISVSELYFTTKTIAGNNFRY 483 Query: 189 LIIYCELAFVYLIL----TSFCYIIQIKIESSVTQH 220 + A +Y IL TS I+ +I+ + Sbjct: 484 FETFFVTAVIYFILTFTITSLLRAIEKRIDGRPSDQ 519 >gi|225862619|ref|YP_002747997.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB102] gi|225789271|gb|ACO29488.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB102] Length = 218 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ + +V R PL++ F+ ++ LP IGI Sbjct: 25 SVIALIGSFILGIILAVMRIA-PIRILNWLGATFVEFVRNIPLVLIAFIFYFALPVIGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + H++LPQ + Sbjct: 84 LNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQAMYHVVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|254451516|ref|ZP_05064953.1| ABC-type glutamine transport system, permease component [Octadecabacter antarcticus 238] gi|198265922|gb|EDY90192.1| ABC-type glutamine transport system, permease component [Octadecabacter antarcticus 238] Length = 206 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/180 (33%), Positives = 106/180 (58%), Gaps = 2/180 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I+ + +IS+++G +A+ + + YV I R P+LV + ++YGLP Sbjct: 8 TILISVTAILISVVVGLLVALPGLS-EKRGWRMFNRTYVEIVRSVPILVLILWVYYGLPT 66 Query: 84 I-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + GI F A +++L L+ SA+ +EI R+ I SI +GQ++A+ ++ L + T+R+IILP Sbjct: 67 VSGITLSVFWAGVLALALSDSAFQAEIFRAGIQSIGRGQYEAAQSVSLNYRDTMRYIILP 126 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q I L ++ + +LK +S+ S I + E+ + A +V + Y+PL IY L YL+L Sbjct: 127 QAIRRILPALGNQLVYMLKMSSLVSVIGLQELTRKANELVVSEYRPLEIYTILVLEYLVL 186 >gi|197294964|ref|YP_002153505.1| putative binding-protein-dependent transport system protein [Burkholderia cenocepacia J2315] gi|195944443|emb|CAR57045.1| putative binding-protein-dependent transport system component [Burkholderia cenocepacia J2315] Length = 248 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 124/224 (55%), Gaps = 11/224 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++D+ QLL AA+ TL + S V+ ++ I +R+ + + Y+ +F Sbjct: 5 FAFLVDTLRQLL-AAVPTTLGLFFASLVLGGLLSLVIVTMRVS-PRWLPNRFARAYILVF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIIS 116 RG+PLL+Q+F+++YGL G++ +SF V ++SL L + Y +EI+R +++ Sbjct: 63 RGSPLLIQMFLVYYGLGQFGVIRESFMWPLLREPYVCAVLSLALCTAGYTAEILRGGLMA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P GQ +A Y+IGL+ +R +I P + S+E + ++KST++AS +T+ E+ Sbjct: 123 VPIGQIEAGYSIGLSGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 AQ+I+ TY+ ++ A +YL L + +E ++ H Sbjct: 183 VAQQIIQQTYRTTEVFVCAAVIYLGLNFIVVRLLGALEWRLSGH 226 >gi|161507109|ref|YP_001577063.1| glutamine ABC transporter membrane protein [Lactobacillus helveticus DPC 4571] gi|160348098|gb|ABX26772.1| Glutamine ABC transporter (membrane protein) [Lactobacillus helveticus DPC 4571] Length = 217 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 116/205 (56%), Gaps = 9/205 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W ++ + L + VT+ ++ IS +S ++G + +IR + +S I+ F + Sbjct: 8 YSWVDI------RFLLQGLWVTIYVSLISIALSFVVGLILGLIR-YTKIKYVSAIVGFII 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++GLP +GIV + A I +L + A ++EI+RS I S+ GQ Sbjct: 61 DIIRNLPLLLIIFFTYFGLPQLGIVTNPTTASIAALVIFEGAMLAEIVRSGIGSVDPGQM 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 + + + G++ Q + H+++PQ + L ++F+S++K TS+A+ I +PE+ AQ I Sbjct: 121 EGARSNGMSYGQAMYHVVMPQALNHMIPALLAQFVSLVKDTSLATIIVLPELLYNAQIIY 180 Query: 183 STTYQPLI-IYCELAFVYLILTSFC 206 S LI +Y +A +Y ++ FC Sbjct: 181 SQNTTYLIPMYVIIAIMYFVV-CFC 204 >gi|251788813|ref|YP_003003534.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247537434|gb|ACT06055.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 233 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 65/212 (30%), Positives = 113/212 (53%), Gaps = 5/212 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIR--IFFSDTIISLIMHFYVWIFRGTPLLVQL 74 L I TL + F +LIIG +AV+R +F I + F V+IFRG P+L+ + Sbjct: 13 LLEGIANTLMVTLTCFTSALIIGLTVAVLRRLVF---PFIKKTLDFLVFIFRGIPVLIAV 69 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F++++GLP G+ +A+ IS+ L Y++E+ R ++ + + A+ A GL++ Q Sbjct: 70 FLVYFGLPATGLSISPLLAMNISIGLISGGYLAEVFRGALQLVEPSEITAAKAAGLSKLQ 129 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 IR+I +PQ S + +EF S+LKS+ A T+ I EI + A + +TT L+IY Sbjct: 130 IIRYIEIPQMFRFSVPGILNEFSSVLKSSPFAYTVGISEITKQAMSLTATTMNGLVIYTL 189 Query: 195 LAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 +Y ++ + ++E + ++K Sbjct: 190 AGILYFLIYKLSILAAKQLEIKFKMTSDELEK 221 >gi|271967567|ref|YP_003341763.1| binding-protein-dependent transporter inner membrane component [Streptosporangium roseum DSM 43021] gi|270510742|gb|ACZ89020.1| binding-protein-dependent transport systems inner membrane component [Streptosporangium roseum DSM 43021] Length = 214 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/206 (32%), Positives = 116/206 (56%), Gaps = 2/206 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I+D P+ + ++VTL + SF+ + ++G I +R+ ++ I YV F+ Sbjct: 4 ILDHLPEF-WEGLIVTLQLTAASFLGAAVVGLVITAMRVS-PVGVLRGIGTAYVETFQNL 61 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLLV L + +GLP IGI D V I+ + L +AYI+E +RS + ++ GQ +A+ A+ Sbjct: 62 PLLVLLVLAVFGLPEIGIKADLLVTAIVVIALYEAAYIAEALRSGVNAVSAGQGEAARAL 121 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q++RH+ILPQ + T PL + FI++ +TS+A+ I + ++ A R+ QP Sbjct: 122 GLTFGQSLRHVILPQALRTVIQPLGNIFIALTMNTSLAAAIGVVDLTAAANRVNLMEAQP 181 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIE 214 + I+ Y ++ + + ++E Sbjct: 182 IPIFVGAGLAYALIAACAGFVTGRLE 207 >gi|161506742|ref|YP_001576692.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus helveticus DPC 4571] gi|160347731|gb|ABX26405.1| Glutamine ABC transporter substrate binding/permease protein [Lactobacillus helveticus DPC 4571] Length = 494 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 110/187 (58%), Gaps = 7/187 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I T+ I S +I +++G +A++R+ + ++ I Y+ RGTP +VQ+ +++ Sbjct: 294 GIEYTIIITVFSVLIGIVLGMLLALMRLS-KNKLLHWIAVCYIEFIRGTPQMVQILFVYF 352 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G+ + + VA II++ LN AY++E IRS I S+ KGQ +A+ ++GL++ + R++ Sbjct: 353 GVGALISNLSALVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLGLSQAKAYRYV 412 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCELA 196 I+PQ + L +EFI++LK +S+ S I + E+ + I ++TY+ PL I Sbjct: 413 IIPQALKNIWPALDNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGVLPLFIAM--- 469 Query: 197 FVYLILT 203 +Y I+T Sbjct: 470 IIYFIMT 476 >gi|157144753|ref|YP_001452072.1| hypothetical protein CKO_00480 [Citrobacter koseri ATCC BAA-895] gi|157081958|gb|ABV11636.1| hypothetical protein CKO_00480 [Citrobacter koseri ATCC BAA-895] Length = 238 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 115/213 (53%), Gaps = 11/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S V+ I+ F+A+ R+ S+ I + + ++FRGTPL VQL V Sbjct: 20 FTGVAITLWLLISSVVMGGILALFLAIGRVS-SNKFIQFPIWLFTYVFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTDLLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P + A +YLI++ + K E QH Sbjct: 199 PFTAFGIAAVLYLIISYVLISLFRKAEKRWLQH 231 >gi|283956347|ref|ZP_06373827.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 1336] gi|283792067|gb|EFC30856.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 1336] Length = 261 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/196 (34%), Positives = 114/196 (58%), Gaps = 5/196 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRG 67 I ++ + + TL I+ S ++S+I+G V F +I+ L + FY+ + RG Sbjct: 53 IATYKEKFLQGFLNTLIISFFSLLLSIILG---GVFCAFSLSSIVFLRFLSIFYIELIRG 109 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLLVQ+ +I+Y + + + + +VA +I L+ +AY++EI R+ I+SI Q +++ A Sbjct: 110 TPLLVQVLLIYYIVANNLGLDNRYVAGVIILSCFSAAYLAEIFRAGILSISISQLESARA 169 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL Q ++I PQ + PLS +F +++K +S+ S I + E+ Q+AQ I S T+ Sbjct: 170 LGLKEMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQSAQEINSYTFA 229 Query: 188 PLIIYCELAFVYLILT 203 L Y LA YL+LT Sbjct: 230 TLEAYVILAITYLVLT 245 >gi|257460053|ref|ZP_05625157.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Campylobacter gracilis RM3268] gi|257442494|gb|EEV17633.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Campylobacter gracilis RM3268] Length = 234 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 115/204 (56%), Gaps = 16/204 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + VI + +GF +A ++ F ++ +S I+ YV I RGTP+++QL V + Sbjct: 40 ITLILTSGGIVIGIALGFMLAFLK-FLNNKFLSFIIDEYVDIIRGTPIVIQLMVFVF--- 95 Query: 83 HIGIVF----DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 I+F ++ A I +L LN SAY++EI+RS I S+ +GQ +A+ A+GL ++ Sbjct: 96 ---IIFATWSNNIAAAIFALGLNSSAYVAEIVRSGINSVDRGQMEAARAMGLGYGTAMKE 152 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEI--FQTAQRIVSTTYQPLIIYCELA 196 II PQ I L++EFIS+ K TSV + I ++ F + + T QP++ L Sbjct: 153 IIFPQAIKNILPALANEFISLFKETSVVGLVAITDLTFFSKSMQAALYTVQPILFAAVL- 211 Query: 197 FVYLILTSFCYIIQIKIESSVTQH 220 Y + F +++++ +ES + ++ Sbjct: 212 -YYASVKFFSFLVKM-LESRLNRN 233 >gi|209519717|ref|ZP_03268505.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209499861|gb|EDZ99928.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 218 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 112/203 (55%), Gaps = 4/203 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++ ++++D+ P LL A + L I L +GF ++R + + + I Sbjct: 1 MQFD-LSVVVDALPALLQGAKLTVL-ITIAGLAGGLAVGFLFGLMRAY-GNAFLQKIAFA 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV RGTP++VQ+ I++ LP + + D+ A I+S+ +N AYI+EI+R S +S+P+ Sbjct: 58 YVEFVRGTPIVVQVMFIYFALPVLLNVRVDALTAAIVSIIVNSGAYIAEIVRGSFLSVPR 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G +A A+G+ + + ++ P I L ++FI LK TS+ I + E+ + Q Sbjct: 118 GLKEAGLALGMPMWRVLGFVVGPVAIRRMTPALGNQFIVSLKDTSLFIVIGVGELTRQGQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 I++ ++ + I+ +A +YL + Sbjct: 178 EIMAANFRAVEIWTAVAAIYLCM 200 >gi|126435628|ref|YP_001071319.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium sp. JLS] gi|126235428|gb|ABN98828.1| amino acid ABC transporter membrane protein, PAAT family [Mycobacterium sp. JLS] Length = 307 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/175 (37%), Positives = 98/175 (56%), Gaps = 23/175 (13%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-P------HIGIVFD-------------SFVAIIISLTL 100 Y+WIFRGTP+ VQL +F+GL P IGI F SF II L L Sbjct: 106 YLWIFRGTPVYVQL--VFWGLFPTLYQNIRIGIPFGPSFFEMNLQGLSISFTLAIIGLGL 163 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N +AY++EIIR+ I S+P+GQ +AS A+G++ T+R +LPQ + P +E IS+L Sbjct: 164 NEAAYMAEIIRAGISSVPEGQSEASTALGMSWTMTMRRTVLPQAMRVIIPPTGNEIISML 223 Query: 161 KSTSVASTITIP-EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 K+TS+ + + E++ A+ I +QP+ + A YL +TS + Q +E Sbjct: 224 KTTSLVTAVPYSMELYGRARDIAGVIFQPIPLLMVAATWYLAITSVLMVGQFYLE 278 >gi|146279203|ref|YP_001169361.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17025] gi|145557444|gb|ABP72056.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17025] Length = 218 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 50/139 (35%), Positives = 85/139 (61%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ FRGT + VQLF +++ LP GI A +++L LN AY +E++R +++S+PK Sbjct: 54 YIEFFRGTSIFVQLFWVYFVLPFAGITLSPLAAGVLTLGLNVGAYGAEVVRGAVLSVPKD 113 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+ LTR Q +RH+ILPQ + + I +LK+T+V S I++P++ AQ Sbjct: 114 QLEATVALNLTRFQRMRHVILPQALPLMLPTFGNNAIELLKATAVVSLISLPDMTFQAQV 173 Query: 181 IVSTTYQPLIIYCELAFVY 199 + + T L+ + + +Y Sbjct: 174 VRAQTGNTLLPFVTILVLY 192 >gi|311069227|ref|YP_003974150.1| glutamine ABC transporter permease [Bacillus atrophaeus 1942] gi|310869744|gb|ADP33219.1| glutamine ABC transporter (permease) [Bacillus atrophaeus 1942] Length = 216 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 63/180 (35%), Positives = 102/180 (56%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + I+ S ++G +AV+RI + + YV R PLL+ FV F+GLP+ Sbjct: 20 TLLASVIALAGSFVLGVLVAVMRIT-TFKPLQWTGTAYVEFIRNIPLLLITFVFFFGLPN 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 G+ D F A I+LT+ SA+I+E IR+ I S+ KGQ +A+ + G T Q + +IILPQ Sbjct: 79 AGVKLDGFQAGTIALTIYTSAFIAEAIRAGIQSVSKGQMEAARSSGFTYSQAMLYIILPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I PL ++F++++K++S+ + ++ A + S T +Y +A YL+LT Sbjct: 139 AIKIVMPPLGNQFLNLVKNSSILGVVAGLDLMYQADLVSSRTLVVFDVYIFVALFYLVLT 198 >gi|229587874|ref|YP_002869993.1| putative amino acid ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229359740|emb|CAY46589.1| putative amino acid ABC transport system, permease [Pseudomonas fluorescens SBW25] Length = 230 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 113/214 (52%), Gaps = 12/214 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 N + F L A ++T+ +A + + L++G A+ + ++ + Y I Sbjct: 1 MNFDLYGFGPALAAGALMTVKLALTALCLGLVLGLAGALAKTSAHKSL-QWVGGAYSTIV 59 Query: 66 RGTPLLVQLFVIFYG----LPHIGIVFD-------SFVAIIISLTLNFSAYISEIIRSSI 114 RG P L+ + +I++G + +G VF +F A +I+L L + AY +E++R +I Sbjct: 60 RGVPELLWVLLIYFGTINVVRELGEVFGIPDLSLSAFAAGVIALGLCYGAYATEVLRGAI 119 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 I+IPKG +A A+GL++ + +I+PQ + L + F+ ++K T++ + I + EI Sbjct: 120 IAIPKGHREAGLALGLSKTRIFTRLIMPQMWRIALPGLGNLFMILMKDTALVTVIGLEEI 179 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 + AQ V+ T QP Y AF+YL LTS + Sbjct: 180 MRHAQIAVTVTRQPFTFYLVAAFIYLGLTSLSMV 213 >gi|225029008|ref|ZP_03718200.1| hypothetical protein EUBHAL_03300 [Eubacterium hallii DSM 3353] gi|224953670|gb|EEG34879.1| hypothetical protein EUBHAL_03300 [Eubacterium hallii DSM 3353] Length = 243 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 33/243 (13%) Query: 4 EWF---------NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD--- 51 EWF + I D + + + VTL + ++ ++ L++G IAVIR Sbjct: 3 EWFSGIKAKFILDFIADQRWKYITDGLKVTLEVTFLALILGLVLGAVIAVIRTTHDQLKE 62 Query: 52 -----------TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF----DSFVAIII 96 + LI Y+ + RGTP +VQL ++F+ IV + + +I Sbjct: 63 DQSKGFGSFLIKLADLICRVYLTVIRGTPTMVQLLIMFF------IVLASSNNKVMVAVI 116 Query: 97 SLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF 156 + +N AY++EI RS I+S+ KGQ +A ++GL T+ II+PQ I L +E Sbjct: 117 TFGVNSGAYVAEIFRSGIMSVDKGQMEAGRSLGLGYTDTMLQIIMPQAIKNCLPALVNEM 176 Query: 157 ISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 I++LK TS+ I + E+ + I TY ++ +A +YL++ F + K+E Sbjct: 177 ITLLKETSICGYIGLNELTRGGDIIRGITYDAMMPLLIVAVIYLVIVMFFTWLMGKLERR 236 Query: 217 VTQ 219 + + Sbjct: 237 LRE 239 >gi|153834291|ref|ZP_01986958.1| ABC-type glutamine transport system, permease component [Vibrio harveyi HY01] gi|148869299|gb|EDL68313.1| ABC-type glutamine transport system, permease component [Vibrio harveyi HY01] Length = 246 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 115/210 (54%), Gaps = 11/210 (5%) Query: 2 KYEWFNLIIDSFPQ-------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-I 53 Y+W ++D + L A T+ ++ +S + ++ IG +A+ + SD+ Sbjct: 19 DYQWGWYVLDPSTEQGLTNIKFLVAGFNDTIQVSLLSMLFAMTIGLIVALPAL--SDSPA 76 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRS 112 + I YV + R P+LV L ++YG+P + + + F A +I+LT+ SA+++E+ R Sbjct: 77 LKWINRVYVEVIRSIPVLVLLLWVYYGMPTLLDVSLNHFWAGVIALTIAESAFMAEVFRG 136 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I +I +GQ +A+ ++GL Q +R +ILPQ PL ++F+ ILK +S+ S I + Sbjct: 137 GIQAISRGQHEAAESLGLNYWQKMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLS 196 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 ++ + A +V Y PL IY L YL+L Sbjct: 197 DLTRRANELVVNEYLPLEIYTFLVLEYLVL 226 >gi|260467392|ref|ZP_05813564.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259028852|gb|EEW30156.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 219 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 94/169 (55%), Gaps = 2/169 (1%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 AI TL +S + + +GF +IR + L + F + R TP+L L+ ++ Sbjct: 17 GAIGTTLLATVLSCLGASALGFIFEMIR--RGGGVTGLAVRFLIDFIRSTPVLAWLYFLY 74 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 + LP GI + I+ L+L +S Y++E+ ++ I +IPKGQ +A+ A+ LTR+ T+ Sbjct: 75 FVLPFYGIRLGAMTVGILGLSLYYSGYLAEVFKAGIDAIPKGQQEAARALSLTRRDTVVF 134 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +I PQ + A PL + +SILK+T + + +PE+ A I S TY+ Sbjct: 135 VIAPQMLRNVAAPLGNYLVSILKATPYLAILAVPEMLGRAFDIASETYR 183 >gi|317403436|gb|EFV83948.1| hypothetical protein HMPREF0005_01969 [Achromobacter xylosoxidans C54] Length = 217 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 4 EWFNLIIDSFPQLLYAA---IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 E+F + P LL A I+VTL S V+S ++G A++R+ + +S Sbjct: 3 EFFKDAAEYLPILLEGAKLTILVTLG----SLVLSTLLGLVWALMRVS-GNKYLSRFSAG 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + + RG P++V LF I++ +P +GI + A II L + +SAY +E R+ I +I +G Sbjct: 58 VINLLRGIPIIVLLFYIYFVMPDMGIALTAVQAAIIGLGIAYSAYQAENFRAGIEAIDRG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+G++ T+R ++LPQ + P + I +LK +S ASTIT+ E+ + Sbjct: 118 QIEAAMAMGMSWSMTMRRVVLPQAVKIVLPPYGNIMIMMLKDSSQASTITVAELALQGKL 177 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 I +T++ ++ +A +YL++ Sbjct: 178 IAVSTFKNATVFSLVALMYLVM 199 >gi|294782144|ref|ZP_06747470.1| amino acid ABC transporter, permease protein [Fusobacterium sp. 1_1_41FAA] gi|294480785|gb|EFG28560.1| amino acid ABC transporter, permease protein [Fusobacterium sp. 1_1_41FAA] Length = 240 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/190 (34%), Positives = 109/190 (57%), Gaps = 11/190 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLI 57 K +W I P+ ++A I+ TL I I ++S+++G + + FF II Sbjct: 21 KMDW-EFIAKYTPEFIHAGIL-TLKIGGIGIMLSIVVGILGSWVLYENFKFFKQIIIG-- 76 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 YV + R TPLLVQLF ++YGLP IGI F + II LT +Y+ E RS++ +I Sbjct: 77 ---YVELSRNTPLLVQLFFLYYGLPKIGIKFSPELCGIIGLTFLGGSYMIETFRSALETI 133 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 K Q +++ ++G+T+ QT+R++ILPQ+ S L++ I +LK TSV S I++ ++ Sbjct: 134 DKIQKESALSLGMTKWQTMRYVILPQSFVISLPGLTANIIFMLKETSVFSAISLIDMMFV 193 Query: 178 AQRIVSTTYQ 187 + ++ Y+ Sbjct: 194 TKDLIGLYYK 203 >gi|209558800|ref|YP_002285272.1| Putative glutamine-binding periplasmic protein [Streptococcus pyogenes NZ131] gi|209540001|gb|ACI60577.1| Putative glutamine-binding periplasmic protein [Streptococcus pyogenes NZ131] Length = 498 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 10/173 (5%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIF---------FSDTIISLIMHFYVWIFRGTPLLVQ 73 +TL I+ + L IG I + R + ++ Y+ IFRGTP++VQ Sbjct: 298 MTLLISMGGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEIFRGTPMIVQ 357 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 VI+YG GI D +A I +++N AY+SEI+R I ++ KGQ++A+ A+G T Sbjct: 358 SMVIYYGTAQAFGISIDRTLAAIFIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTH 417 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 QT+R I+LPQ + +EF+ +K TSV + I++ E++ + + + T Sbjct: 418 GQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQT 470 >gi|315635241|ref|ZP_07890518.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aggregatibacter segnis ATCC 33393] gi|315475987|gb|EFU66742.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aggregatibacter segnis ATCC 33393] Length = 219 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 106/182 (58%), Gaps = 2/182 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++ I+ + P+ ++A +++TL +A ++SL+IG AVI + ++ L+ Y+ + Sbjct: 3 WDYILSATPRFVHA-MLMTLHLAFWGILLSLVIGVICAVITTYKVKSLTWLVKG-YIELS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL+Q+F +++GL IG+ D F II L +Y++E IR + ++ KGQ +++ Sbjct: 61 RNTPLLIQVFFLYFGLSKIGLKLDGFTCGIIGLAFLGGSYMAEAIRGGLEAVSKGQIESA 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IGLT Q R++I PQ + + + + ++K TSV S + + E+ A+ ++ Sbjct: 121 LSIGLTPFQAFRYVIFPQAFAIATPAIGANCLFLMKETSVISAVAVAELMFVAKEVIGLD 180 Query: 186 YQ 187 Y+ Sbjct: 181 YK 182 >gi|296102998|ref|YP_003613144.1| allantoate transport membrane protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057457|gb|ADF62195.1| allantoate transport membrane protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 219 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 53/147 (36%), Positives = 87/147 (59%), Gaps = 3/147 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ +F+GTPLL+QLF+ F+G+ GI + A ++LT SA++ +I SI ++PKG Sbjct: 57 YIELFQGTPLLMQLFLAFFGVALFGIDVSPWTAASLALTFYTSAFLLDIWFGSIRALPKG 116 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+AS +GLT QT+ ++ PQ + + P + ++K T++AS I E+ + Sbjct: 117 QWEASRCLGLTFGQTLYRVVAPQALRIAIAPTVGFAVQVIKGTALASIIGFIELTKAGTM 176 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCY 207 + + TYQP ++ +A Y IL CY Sbjct: 177 LTNVTYQPFKVFALVALGYFIL---CY 200 >gi|156972753|ref|YP_001443660.1| ABC-type amino acid transport system permease component [Vibrio harveyi ATCC BAA-1116] gi|156524347|gb|ABU69433.1| hypothetical protein VIBHAR_00418 [Vibrio harveyi ATCC BAA-1116] Length = 246 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 115/210 (54%), Gaps = 11/210 (5%) Query: 2 KYEWFNLIIDSFPQ-------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-I 53 Y+W ++D + L A T+ ++ +S + ++ IG +A+ + SD+ Sbjct: 19 DYQWGWYVLDPSTEQGLTNIKFLVAGFNDTIQVSLLSMLFAMTIGLIVALPAL--SDSPA 76 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRS 112 + I YV + R P+LV L ++YG+P + + + F A +I+LT+ SA+++E+ R Sbjct: 77 LKWINRVYVEVIRSIPVLVLLLWVYYGMPTLLDVSLNHFWAGVIALTIAESAFMAEVFRG 136 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I +I +GQ +A+ ++GL Q +R +ILPQ PL ++F+ ILK +S+ S I + Sbjct: 137 GIQAISRGQHEAAESLGLNYWQKMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLS 196 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 ++ + A +V Y PL IY L YL+L Sbjct: 197 DLTRRANELVVNEYLPLEIYTFLVLEYLVL 226 >gi|295697138|ref|YP_003590376.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus tusciae DSM 2912] gi|295412740|gb|ADG07232.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus tusciae DSM 2912] Length = 219 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/197 (32%), Positives = 110/197 (55%), Gaps = 8/197 (4%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVI 77 ++VTL + S ++ L++G +A +R+ I L I YV I R TP++V+LF + Sbjct: 18 GMLVTLELTVASLIVGLVVGGVLAFMRM---SRIAPLRAIGAVYVEIVRSTPVIVELFFV 74 Query: 78 FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 +Y L IGI+ F A +I L + A SEI RS ++S+ GQ +A+ A+GL RK T+ Sbjct: 75 YYSLAQIGIIIPGFEAAVIVLGGFYGALYSEIFRSGLMSVDFGQREAAEALGLRRKTTLL 134 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 +I+PQ++ P +S I ++K T++ TI + E+ A + S T+Q + ++ Sbjct: 135 RVIVPQSLLAILPPGTSAAIDLVKDTALVITIGVGELMYQAYQAGSETFQYMNVFLIAGV 194 Query: 198 VYLILTSFCYIIQIKIE 214 +Y I+ CY + + + Sbjct: 195 LYFIV---CYGLSLAVR 208 >gi|229171200|ref|ZP_04298793.1| Amino acid ABC transproter, permease [Bacillus cereus MM3] gi|228612280|gb|EEK69509.1| Amino acid ABC transproter, permease [Bacillus cereus MM3] Length = 230 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 109/187 (58%), Gaps = 3/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A IV + SLI F A RI ++ I++ I H Y+ I Sbjct: 2 FEIFMSTYPTLLKATIVTLQLTLTSLLLGSLIGLLF-AFFRIS-NNKILNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ I IVF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSI-IVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I ++ Sbjct: 119 RSLGMPYPLAMRRIVLPQAFRQSLPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAASN 178 Query: 186 YQPLIIY 192 +Q L Y Sbjct: 179 FQQLDTY 185 >gi|149190471|ref|ZP_01868742.1| putative amino acid ABC transporter, permease protein [Vibrio shilonii AK1] gi|148835725|gb|EDL52691.1| putative amino acid ABC transporter, permease protein [Vibrio shilonii AK1] Length = 247 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/210 (31%), Positives = 114/210 (54%), Gaps = 11/210 (5%) Query: 2 KYEWFNLIIDSFPQ-------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-I 53 YEW ++D + L A T+ ++ +S + +++IG +A + SD Sbjct: 20 DYEWGWYVLDPSTEQGKTNLGFLLAGFKDTIYVSLLSMMFAMLIGLLVAFPAL--SDKPW 77 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRS 112 + I YV + R P+LV L ++YG+P + I + F A +I+LT+ SA+++E+ R Sbjct: 78 LRAINRVYVEVIRSIPVLVLLLWVYYGMPTLLDISLNHFWAGVIALTIAESAFMAEVFRG 137 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++ +GQ +A+ ++GL Q +R +ILPQ PL ++F+ ILK +S+ S I + Sbjct: 138 GIQAVTRGQHEAAESLGLNYWQKMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLS 197 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 ++ + A +V Y PL IY L YL+L Sbjct: 198 DLTRRANELVVNEYLPLEIYTFLVLEYLVL 227 >gi|19704137|ref|NP_603699.1| amino acid ABC transporter permease [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328658|ref|ZP_06871175.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19714347|gb|AAL94998.1| Amino acid transport system permease protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154257|gb|EFG95058.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 236 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/167 (37%), Positives = 98/167 (58%), Gaps = 3/167 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII--ISLTLNFSAYISEIIR 111 +S I + Y+ + RGTP++VQL +I L +GI+ ++ + II I+ LN AY++EIIR Sbjct: 68 LSKIAYIYIDVIRGTPVVVQL-MILANLIFVGILRETPILIIGGIAFGLNSGAYVAEIIR 126 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + I + KGQ +A A+GL+ Q +R II+PQ + L SEFI++LK TS+ I Sbjct: 127 AGIEGLDKGQMEAGRALGLSYSQAMRKIIVPQAVKNILPALVSEFITLLKETSIIGFIGG 186 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 ++ ++A I S TY+ + + +YLILTS K+E + Sbjct: 187 IDLLRSANIITSQTYRGVEPLLAVGIIYLILTSIFTAFMRKVERGLK 233 >gi|229131355|ref|ZP_04260255.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST196] gi|228652099|gb|EEL08036.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST196] Length = 230 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 109/187 (58%), Gaps = 3/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A IV + SLI F A RI ++ I++ I H Y+ I Sbjct: 2 FEIFMSTYPTLLKATIVTLQLTLTSLLLGSLIGLLF-AFFRIS-NNKILNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ I IVF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSI-IVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R IILPQ S PL ++FI LK +S+ + + + E++ + I ++ Sbjct: 119 RSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAASN 178 Query: 186 YQPLIIY 192 +Q L Y Sbjct: 179 FQQLDTY 185 >gi|225570417|ref|ZP_03779442.1| hypothetical protein CLOHYLEM_06517 [Clostridium hylemonae DSM 15053] gi|225160788|gb|EEG73407.1| hypothetical protein CLOHYLEM_06517 [Clostridium hylemonae DSM 15053] Length = 216 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 102/173 (58%), Gaps = 7/173 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +VV++ I + + SL +G ++ R+ + I Y+ I RGTPL++QL V Sbjct: 10 LAGGMVVSIEIFAATLIFSLPLGLIVSFGRMSRIKPV-QWITKLYISIMRGTPLMLQLMV 68 Query: 77 IFYGLPH--IGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 ++YG P+ G+ + A++I +N++AY +EI R I SI +GQ++A+ +G T Sbjct: 69 VYYG-PYYLFGMRISATYRMTAVLIGFAINYAAYFAEIYRGGIESISEGQYEAARVLGYT 127 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 R QT IILPQ + +++E I+++K TS+A + +PE+F TA++I + Sbjct: 128 RPQTFFRIILPQVMKRILPSVTNEVITLVKDTSLAFVVAVPEMFTTAKQIAAA 180 >gi|167758321|ref|ZP_02430448.1| hypothetical protein CLOSCI_00660 [Clostridium scindens ATCC 35704] gi|167664218|gb|EDS08348.1| hypothetical protein CLOSCI_00660 [Clostridium scindens ATCC 35704] Length = 226 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 119/210 (56%), Gaps = 14/210 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFYVWIFRGTPLLVQLFVI 77 A+++TL + S + + IIG ++ +F I + I + Y+ I RGTPLLVQ+F++ Sbjct: 17 ALMITLEMTVFSLIFATIIG---TIVGLFNVSKIKPLQFIANIYIDIVRGTPLLVQVFIM 73 Query: 78 FYGL--------PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +YGL P IG +FVA +++L+ N AY++EIIR I ++ KGQ +A+ ++G Sbjct: 74 YYGLTQFLQFQWPAIGGFTSAFVAGVVTLSFNAGAYMAEIIRGGIEAVDKGQMEAARSLG 133 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI-VSTTYQP 188 L ++ + IILPQ T + ++FI LK TS+ S I E+ Q + I +++ + Sbjct: 134 LPYRKAMWKIILPQAFRTMLPSIINQFIISLKDTSLISVIGPRELTQNGKIIAANSSTRV 193 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVT 218 + I+ +A YL++ + + +E V+ Sbjct: 194 MAIWIVVALFYLVVCTILSRVAKLVERKVS 223 >gi|224418072|ref|ZP_03656078.1| amino acid ABC transporter ATP-binding protein [Helicobacter canadensis MIT 98-5491] gi|253827401|ref|ZP_04870286.1| ABC-type amino acid transport system, permease component [Helicobacter canadensis MIT 98-5491] gi|253510807|gb|EES89466.1| ABC-type amino acid transport system, permease component [Helicobacter canadensis MIT 98-5491] Length = 238 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 118/213 (55%), Gaps = 15/213 (7%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + +FP LL + ++L IA + F++ I+G +++IRI+ + L Y+ F Sbjct: 6 FEYALSAFPTLL-KGVPISLAIAIVGFILGAILGLILSLIRIYRVPILFQL-ATLYISFF 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLT-------------LNFSAYISEIIRS 112 RG P+LVQ+F+ +YG+P + F+ + I ++ L SAY+SEI RS Sbjct: 64 RGIPVLVQIFLAYYGIPLVLRYFNHQYGLNIDISGIDAIYFMYLVYALYCSAYLSEIFRS 123 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 SI+SI KGQ +A+Y++G+ Q + IILPQ++ + + + FI ++K TS+ ++P Sbjct: 124 SILSIDKGQLEAAYSVGMNTTQALFIIILPQSMLLALPNILNFFIILIKETSLVFAASVP 183 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSF 205 EI A + + L +Y A +Y +++ F Sbjct: 184 EIMGIATLEADRSSKFLEVYIIAALIYWVISIF 216 >gi|328464936|gb|EGF36224.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus helveticus MTCC 5463] Length = 473 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 109/183 (59%), Gaps = 7/183 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I S +I +++G +A++R+ + ++ I Y+ RGTP +VQ+ +++G+ Sbjct: 277 TIIITVFSVLIGIVLGMLLALMRLS-KNKLLHWIAVCYIEFIRGTPQMVQILFVYFGVGA 335 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + + VA II++ LN AY++E IRS I S+ KGQ +A+ ++GL++ + R++I+PQ Sbjct: 336 LISNLSALVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLGLSQAKAYRYVIIPQ 395 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCELAFVYL 200 + L +EFI++LK +S+ S I + E+ + I ++TY+ PL I +Y Sbjct: 396 ALKNIWPALDNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGVLPLFIAM---IIYF 452 Query: 201 ILT 203 I+T Sbjct: 453 IMT 455 >gi|260772507|ref|ZP_05881423.1| amino acid ABC transporter permease protein [Vibrio metschnikovii CIP 69.14] gi|260611646|gb|EEX36849.1| amino acid ABC transporter permease protein [Vibrio metschnikovii CIP 69.14] Length = 225 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 114/203 (56%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I+ S P L ++ + T+ + +S VI L + +A+ R S +I L Y++ F Sbjct: 3 FSVILQSLP-LYFSGLWTTVWLVGLSLVIGLAVAIPLAIARNS-SLWVIWLPAWCYIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I + KG Sbjct: 61 RGTPLLVQLYLIYYGMDQFFPVKDTWWEHAWFCALVAFILNTSAYTAEIIRGAINGLSKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G++ T R I+LP + + S+E I +L ++VA +TI ++ TA+ Sbjct: 121 EIEAAKAYGMSPWLTYRRIVLPSALRRALPAYSNEVIFMLHGSAVAGIVTILDLTGTARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + YL+LT Sbjct: 181 VSSRYYAPFEAFLVAGLFYLLLT 203 >gi|260102147|ref|ZP_05752384.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus DSM 20075] gi|260084037|gb|EEW68157.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus DSM 20075] Length = 494 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 110/187 (58%), Gaps = 7/187 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I T+ I S +I +++G +A++R+ + ++ I Y+ RGTP +VQ+ +++ Sbjct: 294 GIEYTIIITVFSVLIGIVLGMLLALMRLS-KNKLLHWIAVCYIEFIRGTPQMVQILFVYF 352 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G+ + + VA II++ LN AY++E IRS I S+ KGQ +A+ ++GL++ + R++ Sbjct: 353 GVGALISNLSALVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLGLSQAKAYRYV 412 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCELA 196 I+PQ + L +EFI++LK +S+ S I + E+ + I ++TY+ PL I Sbjct: 413 IIPQALKNIWPALDNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGVLPLFIAM--- 469 Query: 197 FVYLILT 203 +Y I+T Sbjct: 470 IIYFIMT 476 >gi|15832445|ref|NP_311218.1| histidine transport system membrane protein M [Escherichia coli O157:H7 str. Sakai] gi|16130242|ref|NP_416810.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|24113679|ref|NP_708189.1| histidine transport, membrane protein M [Shigella flexneri 2a str. 301] gi|26248695|ref|NP_754735.1| histidine transport system permease hisM [Escherichia coli CFT073] gi|30063733|ref|NP_837904.1| histidine transport, membrane protein M [Shigella flexneri 2a str. 2457T] gi|74312824|ref|YP_311243.1| histidine transport, membrane protein M [Shigella sonnei Ss046] gi|82777718|ref|YP_404067.1| histidine transport, membrane protein M [Shigella dysenteriae Sd197] gi|89109127|ref|AP_002907.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|91211603|ref|YP_541589.1| histidine transport system membrane protein M [Escherichia coli UTI89] gi|110642511|ref|YP_670241.1| histidine transport system permease protein HisM [Escherichia coli 536] gi|110806270|ref|YP_689790.1| histidine transport, membrane protein M [Shigella flexneri 5 str. 8401] gi|117624497|ref|YP_853410.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli APEC O1] gi|157156249|ref|YP_001463651.1| histidine ABC transporter, permease protein HisM [Escherichia coli E24377A] gi|168748159|ref|ZP_02773181.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC4113] gi|168755062|ref|ZP_02780069.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC4401] gi|168761252|ref|ZP_02786259.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC4501] gi|168767936|ref|ZP_02792943.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC4486] gi|168772964|ref|ZP_02797971.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC4196] gi|168780165|ref|ZP_02805172.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC4076] gi|168787217|ref|ZP_02812224.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC869] gi|168798480|ref|ZP_02823487.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC508] gi|170019384|ref|YP_001724338.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|170081923|ref|YP_001731243.1| histidine/lysine/arginine/ornithine ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170679628|ref|YP_001744507.1| histidine ABC transporter permease HisM [Escherichia coli SMS-3-5] gi|187732602|ref|YP_001881129.1| histidine ABC transporter permease HisM [Shigella boydii CDC 3083-94] gi|188494599|ref|ZP_03001869.1| histidine ABC transporter, permease protein HisM [Escherichia coli 53638] gi|191169482|ref|ZP_03031216.1| histidine ABC transporter, permease protein HisM [Escherichia coli B7A] gi|191170271|ref|ZP_03031825.1| histidine ABC transporter, permease protein HisM [Escherichia coli F11] gi|193062340|ref|ZP_03043435.1| histidine ABC transporter, permease protein HisM [Escherichia coli E22] gi|193068168|ref|ZP_03049132.1| histidine ABC transporter, permease protein HisM [Escherichia coli E110019] gi|194429438|ref|ZP_03061961.1| histidine ABC transporter, permease protein HisM [Escherichia coli B171] gi|194436125|ref|ZP_03068227.1| histidine ABC transporter, permease protein HisM [Escherichia coli 101-1] gi|195935686|ref|ZP_03081068.1| histidine/lysine/arginine/ornithine ABC transporter membrane protein [Escherichia coli O157:H7 str. EC4024] gi|208808672|ref|ZP_03251009.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC4206] gi|208814472|ref|ZP_03255801.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC4045] gi|208820495|ref|ZP_03260815.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC4042] gi|209398320|ref|YP_002271716.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC4115] gi|209919807|ref|YP_002293891.1| histidine ABC transporter permease [Escherichia coli SE11] gi|215487520|ref|YP_002329951.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|217327682|ref|ZP_03443765.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. TW14588] gi|218554863|ref|YP_002387776.1| histidine/lysine/arginine/ornithine ABC transporter membrane protein [Escherichia coli IAI1] gi|218559220|ref|YP_002392133.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|218690467|ref|YP_002398679.1| histidine/lysine/arginine/ornithine ABC transporter membrane protein [Escherichia coli ED1a] gi|218695906|ref|YP_002403573.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|218700783|ref|YP_002408412.1| histidine/lysine/arginine/ornithine ABC transporter membrane protein [Escherichia coli IAI39] gi|227887365|ref|ZP_04005170.1| histidine ABC superfamily ATP binding cassette transporter, permease protein HisM [Escherichia coli 83972] gi|237704784|ref|ZP_04535265.1| histidine transport system membrane protein M [Escherichia sp. 3_2_53FAA] gi|238901482|ref|YP_002927278.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli BW2952] gi|253772769|ref|YP_003035600.1| polar amino acid ABC transporter inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162316|ref|YP_003045424.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli B str. REL606] gi|254794200|ref|YP_003079037.1| histidine/lysine/arginine/ornithine ABC transporter membrane protein [Escherichia coli O157:H7 str. TW14359] gi|256017535|ref|ZP_05431400.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily protein [Shigella sp. D9] gi|256022008|ref|ZP_05435873.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily protein [Escherichia sp. 4_1_40B] gi|260844894|ref|YP_003222672.1| histidine/lysine/arginine/ornithine transporter subunit HisM [Escherichia coli O103:H2 str. 12009] gi|260856351|ref|YP_003230242.1| histidine/lysine/arginine/ornithine transporter subunit HisM [Escherichia coli O26:H11 str. 11368] gi|260869029|ref|YP_003235431.1| histidine/lysine/arginine/ornithine transporter subunit HisM [Escherichia coli O111:H- str. 11128] gi|261223238|ref|ZP_05937519.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261259212|ref|ZP_05951745.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK966] gi|291283548|ref|YP_003500366.1| Histidine transport system permease protein hisM [Escherichia coli O55:H7 str. CB9615] gi|293415599|ref|ZP_06658242.1| histidine transport system permease hisM [Escherichia coli B185] gi|293446644|ref|ZP_06663066.1| histidine transport system permease hisM [Escherichia coli B088] gi|297520316|ref|ZP_06938702.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily protein [Escherichia coli OP50] gi|300818090|ref|ZP_07098302.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300822181|ref|ZP_07102323.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|300903697|ref|ZP_07121612.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|300918521|ref|ZP_07135114.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|300924576|ref|ZP_07140538.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|300931335|ref|ZP_07146667.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|300948544|ref|ZP_07162638.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300956425|ref|ZP_07168716.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|300980891|ref|ZP_07175237.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|300983440|ref|ZP_07176589.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|301023554|ref|ZP_07187318.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|301024138|ref|ZP_07187848.1| ABC transporter, permease protein [Escherichia coli MS 69-1] gi|301049065|ref|ZP_07196049.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|301303231|ref|ZP_07209356.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|301328808|ref|ZP_07221853.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|301647590|ref|ZP_07247387.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|306814581|ref|ZP_07448743.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily protein [Escherichia coli NC101] gi|307138972|ref|ZP_07498328.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily protein [Escherichia coli H736] gi|307311132|ref|ZP_07590776.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|309784983|ref|ZP_07679616.1| histidine transport system permease protein hisM [Shigella dysenteriae 1617] gi|309793190|ref|ZP_07687618.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|312967607|ref|ZP_07781822.1| histidine transport system permease protein hisM [Escherichia coli 2362-75] gi|312973433|ref|ZP_07787605.1| histidine transport system permease protein hisM [Escherichia coli 1827-70] gi|331642946|ref|ZP_08344081.1| histidine transport system permease protein HisM [Escherichia coli H736] gi|331647962|ref|ZP_08349054.1| histidine transport system permease protein HisM [Escherichia coli M605] gi|331653750|ref|ZP_08354751.1| histidine transport system permease protein HisM [Escherichia coli M718] gi|331669006|ref|ZP_08369854.1| histidine transport system permease protein HisM [Escherichia coli TA271] gi|331678253|ref|ZP_08378928.1| histidine transport system permease protein HisM [Escherichia coli H591] gi|331683978|ref|ZP_08384574.1| histidine transport system permease protein HisM [Escherichia coli H299] gi|332278543|ref|ZP_08390956.1| histidine transport system membrane protein M [Shigella sp. D9] gi|84028921|sp|P0AEU5|HISM_ECO57 RecName: Full=Histidine transport system permease protein hisM gi|84028922|sp|P0AEU4|HISM_ECOL6 RecName: Full=Histidine transport system permease protein hisM gi|84028923|sp|P0AEU3|HISM_ECOLI RecName: Full=Histidine transport system permease protein hisM gi|84028924|sp|P0AEU6|HISM_SHIFL RecName: Full=Histidine transport system permease protein hisM gi|26109100|gb|AAN81303.1|AE016763_262 Histidine transport system permease protein hisM [Escherichia coli CFT073] gi|1788645|gb|AAC75367.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|1799688|dbj|BAA16153.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|13362661|dbj|BAB36614.1| histidine transport system membrane protein M [Escherichia coli O157:H7 str. Sakai] gi|24052745|gb|AAN43896.1| histidine transport, membrane protein M [Shigella flexneri 2a str. 301] gi|30041988|gb|AAP17714.1| histidine transport, membrane protein M [Shigella flexneri 2a str. 2457T] gi|73856301|gb|AAZ89008.1| histidine transport, membrane protein M [Shigella sonnei Ss046] gi|81241866|gb|ABB62576.1| histidine transport, membrane protein M [Shigella dysenteriae Sd197] gi|91073177|gb|ABE08058.1| histidine transport system membrane protein M [Escherichia coli UTI89] gi|110344103|gb|ABG70340.1| histidine transport system permease protein HisM [Escherichia coli 536] gi|110615818|gb|ABF04485.1| histidine transport, membrane protein M [Shigella flexneri 5 str. 8401] gi|115513621|gb|ABJ01696.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli APEC O1] gi|157078279|gb|ABV17987.1| histidine ABC transporter, permease protein HisM [Escherichia coli E24377A] gi|169754312|gb|ACA77011.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|169889758|gb|ACB03465.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|170517346|gb|ACB15524.1| histidine ABC transporter, permease protein HisM [Escherichia coli SMS-3-5] gi|187429594|gb|ACD08868.1| histidine ABC transporter, permease protein HisM [Shigella boydii CDC 3083-94] gi|187771251|gb|EDU35095.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC4196] gi|188017304|gb|EDU55426.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC4113] gi|188489798|gb|EDU64901.1| histidine ABC transporter, permease protein HisM [Escherichia coli 53638] gi|189001981|gb|EDU70967.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC4076] gi|189357678|gb|EDU76097.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC4401] gi|189363002|gb|EDU81421.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC4486] gi|189368323|gb|EDU86739.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC4501] gi|189372783|gb|EDU91199.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC869] gi|189378914|gb|EDU97330.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC508] gi|190900484|gb|EDV60299.1| histidine ABC transporter, permease protein HisM [Escherichia coli B7A] gi|190909787|gb|EDV69372.1| histidine ABC transporter, permease protein HisM [Escherichia coli F11] gi|192932006|gb|EDV84605.1| histidine ABC transporter, permease protein HisM [Escherichia coli E22] gi|192958447|gb|EDV88886.1| histidine ABC transporter, permease protein HisM [Escherichia coli E110019] gi|194412499|gb|EDX28798.1| histidine ABC transporter, permease protein HisM [Escherichia coli B171] gi|194424853|gb|EDX40838.1| histidine ABC transporter, permease protein HisM [Escherichia coli 101-1] gi|195183046|dbj|BAG66606.1| arginine transporter subunit [Escherichia coli O111:H-] gi|208728473|gb|EDZ78074.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC4206] gi|208735749|gb|EDZ84436.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC4045] gi|208740618|gb|EDZ88300.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC4042] gi|209159720|gb|ACI37153.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC4115] gi|209764898|gb|ACI80761.1| histidine transport system membrane protein M [Escherichia coli] gi|209764900|gb|ACI80762.1| histidine transport system membrane protein M [Escherichia coli] gi|209764902|gb|ACI80763.1| histidine transport system membrane protein M [Escherichia coli] gi|209764904|gb|ACI80764.1| histidine transport system membrane protein M [Escherichia coli] gi|209764906|gb|ACI80765.1| histidine transport system membrane protein M [Escherichia coli] gi|209913066|dbj|BAG78140.1| histidine ABC transporter permease component [Escherichia coli SE11] gi|215265592|emb|CAS09995.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|217320049|gb|EEC28474.1| histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. TW14588] gi|218352638|emb|CAU98419.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|218361631|emb|CAQ99225.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI1] gi|218365989|emb|CAR03733.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|218370769|emb|CAR18582.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI39] gi|218428031|emb|CAR08951.2| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily [Escherichia coli ED1a] gi|222034063|emb|CAP76804.1| Histidine transport system permease protein hisM [Escherichia coli LF82] gi|226901150|gb|EEH87409.1| histidine transport system membrane protein M [Escherichia sp. 3_2_53FAA] gi|227835715|gb|EEJ46181.1| histidine ABC superfamily ATP binding cassette transporter, permease protein HisM [Escherichia coli 83972] gi|238861421|gb|ACR63419.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli BW2952] gi|242377940|emb|CAQ32709.1| hisM, subunit of histidine ABC transporter and lysine/arginine/ornithine ABC Transporter [Escherichia coli BL21(DE3)] gi|253323813|gb|ACT28415.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974217|gb|ACT39888.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli B str. REL606] gi|253978384|gb|ACT44054.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli BL21(DE3)] gi|254593600|gb|ACT72961.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|257755000|dbj|BAI26502.1| histidine/lysine/arginine/ornithine transporter subunit HisM [Escherichia coli O26:H11 str. 11368] gi|257760041|dbj|BAI31538.1| histidine/lysine/arginine/ornithine transporter subunit HisM [Escherichia coli O103:H2 str. 12009] gi|257765385|dbj|BAI36880.1| histidine/lysine/arginine/ornithine transporter subunit HisM [Escherichia coli O111:H- str. 11128] gi|260448599|gb|ACX39021.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli DH1] gi|281179393|dbj|BAI55723.1| histidine ABC transporter permease component [Escherichia coli SE15] gi|281601748|gb|ADA74732.1| Histidine transport system permease protein hisM [Shigella flexneri 2002017] gi|290763421|gb|ADD57382.1| Histidine transport system permease protein hisM [Escherichia coli O55:H7 str. CB9615] gi|291323474|gb|EFE62902.1| histidine transport system permease hisM [Escherichia coli B088] gi|291433247|gb|EFF06226.1| histidine transport system permease hisM [Escherichia coli B185] gi|294491382|gb|ADE90138.1| histidine ABC transporter, permease protein HisM [Escherichia coli IHE3034] gi|299880789|gb|EFI89000.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|300299112|gb|EFJ55497.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|300307704|gb|EFJ62224.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|300316774|gb|EFJ66558.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|300396682|gb|EFJ80220.1| ABC transporter, permease protein [Escherichia coli MS 69-1] gi|300404279|gb|EFJ87817.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|300408528|gb|EFJ92066.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|300414335|gb|EFJ97645.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|300419207|gb|EFK02518.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|300451954|gb|EFK15574.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300460840|gb|EFK24333.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|300525311|gb|EFK46380.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|300529234|gb|EFK50296.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300841405|gb|EFK69165.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|300844808|gb|EFK72568.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|301074280|gb|EFK89086.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|305851975|gb|EFM52427.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily protein [Escherichia coli NC101] gi|306908638|gb|EFN39135.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|307554368|gb|ADN47143.1| histidine transport system permease protein HisM [Escherichia coli ABU 83972] gi|307626156|gb|ADN70460.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily protein [Escherichia coli UM146] gi|308123476|gb|EFO60738.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|308927353|gb|EFP72827.1| histidine transport system permease protein hisM [Shigella dysenteriae 1617] gi|309702619|emb|CBJ01948.1| histidine ABC transporter, permease protein [Escherichia coli ETEC H10407] gi|310332028|gb|EFP99263.1| histidine transport system permease protein hisM [Escherichia coli 1827-70] gi|312287804|gb|EFR15709.1| histidine transport system permease protein hisM [Escherichia coli 2362-75] gi|312946926|gb|ADR27753.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily protein [Escherichia coli O83:H1 str. NRG 857C] gi|313651131|gb|EFS15530.1| histidine transport system permease protein hisM [Shigella flexneri 2a str. 2457T] gi|315061600|gb|ADT75927.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli W] gi|315136942|dbj|BAJ44101.1| histidine transport system permease component [Escherichia coli DH1] gi|315255244|gb|EFU35212.1| ABC transporter, permease protein [Escherichia coli MS 85-1] gi|315285931|gb|EFU45369.1| ABC transporter, permease protein [Escherichia coli MS 110-3] gi|315292288|gb|EFU51640.1| ABC transporter, permease protein [Escherichia coli MS 153-1] gi|315298160|gb|EFU57424.1| ABC transporter, permease protein [Escherichia coli MS 16-3] gi|315615576|gb|EFU96208.1| histidine transport system permease protein hisM [Escherichia coli 3431] gi|320178718|gb|EFW53681.1| Histidine ABC transporter, permease protein HisM [Shigella boydii ATCC 9905] gi|320192069|gb|EFW66714.1| Histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. EC1212] gi|320196175|gb|EFW70799.1| Histidine ABC transporter, permease protein HisM [Escherichia coli WV_060327] gi|320199898|gb|EFW74487.1| Histidine ABC transporter, permease protein HisM [Escherichia coli EC4100B] gi|320641135|gb|EFX10614.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Escherichia coli O157:H7 str. G5101] gi|320646523|gb|EFX15442.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Escherichia coli O157:H- str. 493-89] gi|320651620|gb|EFX20000.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Escherichia coli O157:H- str. H 2687] gi|320657372|gb|EFX25174.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663074|gb|EFX30391.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Escherichia coli O55:H7 str. USDA 5905] gi|320667892|gb|EFX34800.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Escherichia coli O157:H7 str. LSU-61] gi|323156458|gb|EFZ42613.1| histidine transport system permease protein hisM [Escherichia coli EPECa14] gi|323161644|gb|EFZ47529.1| histidine transport system permease protein hisM [Escherichia coli E128010] gi|323168521|gb|EFZ54201.1| histidine transport system permease protein hisM [Shigella sonnei 53G] gi|323171990|gb|EFZ57634.1| histidine transport system permease protein hisM [Escherichia coli LT-68] gi|323176767|gb|EFZ62357.1| histidine transport system permease protein hisM [Escherichia coli 1180] gi|323184373|gb|EFZ69749.1| histidine transport system permease protein hisM [Escherichia coli 1357] gi|323187968|gb|EFZ73263.1| histidine transport system permease protein hisM [Escherichia coli RN587/1] gi|323377819|gb|ADX50087.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli KO11] gi|323936597|gb|EGB32884.1| inner membrane transport system [Escherichia coli E1520] gi|323940996|gb|EGB37183.1| inner membrane transport system [Escherichia coli E482] gi|323944820|gb|EGB40886.1| inner membrane transport system [Escherichia coli H120] gi|323952100|gb|EGB47974.1| inner membrane transport system [Escherichia coli H252] gi|323956073|gb|EGB51826.1| inner membrane transport system [Escherichia coli H263] gi|323961380|gb|EGB56991.1| inner membrane transport system [Escherichia coli H489] gi|323973109|gb|EGB68302.1| inner membrane transport system [Escherichia coli TA007] gi|324006683|gb|EGB75902.1| ABC transporter, permease protein [Escherichia coli MS 57-2] gi|324013191|gb|EGB82410.1| ABC transporter, permease protein [Escherichia coli MS 60-1] gi|324020829|gb|EGB90048.1| ABC transporter, permease protein [Escherichia coli MS 117-3] gi|324117815|gb|EGC11714.1| inner membrane transport system [Escherichia coli E1167] gi|325496653|gb|EGC94512.1| histidine transport system membrane protein M [Escherichia fergusonii ECD227] gi|326339660|gb|EGD63471.1| Histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. 1125] gi|326344122|gb|EGD67883.1| Histidine ABC transporter, permease protein HisM [Escherichia coli O157:H7 str. 1044] gi|330912130|gb|EGH40640.1| histidine ABC transporter, permease protein HisM [Escherichia coli AA86] gi|331039744|gb|EGI11964.1| histidine transport system permease protein HisM [Escherichia coli H736] gi|331043686|gb|EGI15824.1| histidine transport system permease protein HisM [Escherichia coli M605] gi|331048599|gb|EGI20675.1| histidine transport system permease protein HisM [Escherichia coli M718] gi|331064200|gb|EGI36111.1| histidine transport system permease protein HisM [Escherichia coli TA271] gi|331074713|gb|EGI46033.1| histidine transport system permease protein HisM [Escherichia coli H591] gi|331078930|gb|EGI50132.1| histidine transport system permease protein HisM [Escherichia coli H299] gi|332088438|gb|EGI93556.1| histidine transport system permease protein hisM [Shigella boydii 5216-82] gi|332100895|gb|EGJ04241.1| histidine transport system membrane protein M [Shigella sp. D9] gi|332344089|gb|AEE57423.1| histidine transport system permease HisM [Escherichia coli UMNK88] gi|332754957|gb|EGJ85322.1| histidine transport system permease protein hisM [Shigella flexneri 4343-70] gi|332755357|gb|EGJ85721.1| histidine transport system permease protein hisM [Shigella flexneri K-671] gi|332756332|gb|EGJ86683.1| histidine transport system permease protein hisM [Shigella flexneri 2747-71] gi|332766127|gb|EGJ96337.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella flexneri 2930-71] gi|333001452|gb|EGK21020.1| histidine transport system permease protein hisM [Shigella flexneri VA-6] gi|333001883|gb|EGK21449.1| histidine transport system permease protein hisM [Shigella flexneri K-218] gi|333002676|gb|EGK22236.1| histidine transport system permease protein hisM [Shigella flexneri K-272] gi|333016293|gb|EGK35624.1| histidine transport system permease protein hisM [Shigella flexneri K-304] gi|333016560|gb|EGK35890.1| histidine transport system permease protein hisM [Shigella flexneri K-227] Length = 238 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 116/213 (54%), Gaps = 11/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + +S VI ++ F+A+ R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLILSVVIGGVLALFLAIGRVS-SNKYIQFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTEFLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I + TYQ Sbjct: 139 YGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P + A +YLI++ + + E QH Sbjct: 199 PFTAFGIAAVLYLIISYVLISLFRRAEKRWLQH 231 >gi|266625008|ref|ZP_06117943.1| amino acid ABC transporter, permease protein [Clostridium hathewayi DSM 13479] gi|288863103|gb|EFC95401.1| amino acid ABC transporter, permease protein [Clostridium hathewayi DSM 13479] Length = 219 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/179 (33%), Positives = 102/179 (56%), Gaps = 1/179 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 II + L A V+T+ I + +++IG +I+ ++ +I I+ Y+ I R T Sbjct: 5 IIGKYLPLYQKAAVLTVKIGFMGIAAAIMIGLLCTIIQ-YYKIPVIRRIVSVYIEISRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PL+VQLF I+YGLP IGI D+ + L +Y+SE RS I ++ Q +++Y++ Sbjct: 64 PLMVQLFFIYYGLPKIGIQTDAAACGVAGLAFLGGSYMSEAFRSGIEAVAPIQEESAYSL 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GL++ QT ++ILPQ + S + I +LK TSV S I++ ++ TA+ ++ Y+ Sbjct: 124 GLSKLQTFSYVILPQAFSISVPAFMANVIFLLKETSVFSAISLMDLMFTAKDLIGLYYK 182 >gi|186473670|ref|YP_001861012.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184196002|gb|ACC73966.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 219 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 115/209 (55%), Gaps = 4/209 (1%) Query: 13 FPQLLYAAIV-VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 P LLY + V + +AC+ +I + +G A + + ++ ++ + V + RG P L Sbjct: 12 LPNLLYGLLTSVEVTVACM--LIGIPLGLLFA-LGVGSTNKLVRRLTVILVELGRGAPAL 68 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 + L ++GLP + I SFV+ ++L +AY SEIIR+ ++S+P GQ +A+YAIGL Sbjct: 69 ILLQFFYFGLPAVHITLSSFVSSTLALAWCTAAYTSEIIRAGLLSVPHGQREAAYAIGLK 128 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 T++ IILPQ + S PL + +L++TS+ T+ +PE+ A +I + T+ + + Sbjct: 129 EVDTLKLIILPQGLRVSVPPLLGFALVMLQATSLCFTVALPELVTRANQIGTGTFLYMQV 188 Query: 192 YCELAFVYLILTSFCYIIQIKIESSVTQH 220 A +Y + ++ IE + +H Sbjct: 189 LTLTALLYAAICLPSTLLVSSIERRLARH 217 >gi|283796771|ref|ZP_06345924.1| amino acid ABC transporter, permease protein [Clostridium sp. M62/1] gi|291075659|gb|EFE13023.1| amino acid ABC transporter, permease protein [Clostridium sp. M62/1] gi|295092614|emb|CBK78721.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Clostridium cf. saccharolyticum K10] gi|295115213|emb|CBL36060.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SM4/1] Length = 216 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/173 (35%), Positives = 106/173 (61%), Gaps = 7/173 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + ++ I ++ + SL +G I+ R+ + +I I+ FY+ I RGTPL++QL V Sbjct: 10 LAGGMGTSIEIFAVTLIFSLPLGLLISFGRMS-KNPVIRTIVKFYISIMRGTPLMLQLMV 68 Query: 77 IFYGLPH--IGI-VFDSFV--AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +++G P+ +GI V + + A I +N++AY +EI RS I S+P GQ++A+ +G + Sbjct: 69 VYFG-PYYLLGIRVGNDYRLWAAFIGFVINYAAYFAEIYRSGIQSMPAGQYEAAKMLGYS 127 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 R QT II PQ I +++E I+++K TS+A TI++ E+F A+ + S+ Sbjct: 128 RTQTFFRIIFPQVIKRILPSITNEVITLVKDTSLAFTISVMEMFTVAKALASS 180 >gi|186472702|ref|YP_001860044.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Burkholderia phymatum STM815] gi|184195034|gb|ACC72998.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Burkholderia phymatum STM815] Length = 223 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 4/211 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 + FP LL IV T+ IA ++++ + F +A + + + YV +FRGT L Sbjct: 3 ELFPLLLQGTIV-TIEIAAFGTLLAIAMAF-VATAAKLAPWAPVRWVGNVYVEVFRGTSL 60 Query: 71 LVQLFVIFY--GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 LVQLF F+ LP I F I+ L L++ AY SEI+R ++ S+P GQ++A+ A+ Sbjct: 61 LVQLFWFFFVLPLPPFRIELTPFTVAIVGLGLHYGAYGSEILRGALRSVPGGQFEAAVAL 120 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 ++ +R I+LPQ + + P ++ I +LK TS+ S IT+ ++ A+++ T++ Sbjct: 121 NMSAFTRMRRIVLPQAMINALPPATNLMIELLKGTSLVSLITLSDLTFRARQLDEATFKT 180 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 I+C +Y +L + E V+ Sbjct: 181 AEIFCLTLIIYFVLAQLLATLMRHFERRVSH 211 >gi|307131247|ref|YP_003883263.1| ABC transporter permease [Dickeya dadantii 3937] gi|306528776|gb|ADM98706.1| ABC transporter permease protein [Dickeya dadantii 3937] Length = 228 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 112/204 (54%), Gaps = 4/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y+W F I P LL + VTL + ++ + ++G + + R + M Sbjct: 5 MHYQWNFGFIWQQLPVLL-RGLGVTLELWLLAGIGGTLLGLALGIARTAHRRAVRLPAMA 63 Query: 60 FYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 F V +FR TP+L+QL +Y LP +GI F +F A ++LTL +AY +EI R+ + S+ Sbjct: 64 F-VELFRNTPVLIQLIWFYYALPVLLGIQFSTFGAATLALTLYTAAYSTEIFRAGLQSME 122 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW+ + A+G++ +R +ILPQ + L++ I + K TS+AS + + E+ Sbjct: 123 QGQWEGAKALGMSYPLALRRVILPQVLQRMLPALTNRLIELAKVTSLASMLAVNELMYQG 182 Query: 179 QRIVSTTYQPLIIYCELAFVYLIL 202 + + S TY+PL I +A Y +L Sbjct: 183 RLLSSDTYRPLEILTVVALFYFVL 206 >gi|291456221|ref|ZP_06595611.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Bifidobacterium breve DSM 20213] gi|291381498|gb|EFE89016.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Bifidobacterium breve DSM 20213] Length = 327 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 74/228 (32%), Positives = 121/228 (53%), Gaps = 31/228 (13%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + I TL + IS V+++I+ +A++R + ++ + F++W FRGTP+ Sbjct: 61 FNENVLEGIQYTLTLTVISMVVAIILSVILAIMRKSI-NPVLRGVSWFFIWFFRGTPVYT 119 Query: 73 QLFVIFYGL-----PHI--GIVFDS--------------FVAIIISLTLNFSAYISEIIR 111 QL IF+GL P I GI F S F A I L LN +AY+SEI+R Sbjct: 120 QL--IFWGLFAVLIPKISLGIPFTSVEFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVR 177 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + + ++ GQ +A+ A+G+ R +R I+LPQ + P +E I +LK+TS+ + + Sbjct: 178 AGLEAVDPGQTEAAKALGMNRTLIMRRIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPF 237 Query: 172 PEIFQTA-QRIVSTTYQP---LIIYCELAFVYLILTSFCYIIQIKIES 215 Q A I + Y+P LI+ C F YL++TS + Q ++E+ Sbjct: 238 TLELQFATNAIANRIYKPIPLLIVAC---FWYLLITSILMVCQSRLEA 282 >gi|22124842|ref|NP_668265.1| ABC transporter permease [Yersinia pestis KIM 10] gi|45440529|ref|NP_992068.1| putative amino acid ABC transporter permease [Yersinia pestis biovar Microtus str. 91001] gi|108808737|ref|YP_652653.1| putative amino acid ABC transporter permease [Yersinia pestis Antiqua] gi|108811006|ref|YP_646773.1| amino acid ABC transporter, permease protein [Yersinia pestis Nepal516] gi|145600150|ref|YP_001164226.1| amino acid ABC transporter, permease protein [Yersinia pestis Pestoides F] gi|149364904|ref|ZP_01886939.1| putative amino acid ABC transporter, permease protein [Yersinia pestis CA88-4125] gi|162420579|ref|YP_001607783.1| amino acid ABC transporter permease [Yersinia pestis Angola] gi|165926615|ref|ZP_02222447.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165935981|ref|ZP_02224551.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|166010969|ref|ZP_02231867.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166213024|ref|ZP_02239059.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167399700|ref|ZP_02305224.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421515|ref|ZP_02313268.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423383|ref|ZP_02315136.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468794|ref|ZP_02333498.1| amino acid ABC transporter, permease protein [Yersinia pestis FV-1] gi|218930280|ref|YP_002348155.1| putative amino acid ABC transporter permease [Yersinia pestis CO92] gi|229838866|ref|ZP_04459025.1| putative amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896359|ref|ZP_04511528.1| putative amino acid ABC transporter, permease protein [Yersinia pestis Pestoides A] gi|229899435|ref|ZP_04514578.1| putative amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901225|ref|ZP_04516347.1| putative amino acid ABC transporter, permease protein [Yersinia pestis Nepal516] gi|270489413|ref|ZP_06206487.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294504971|ref|YP_003569033.1| putative amino acid ABC transporter, permease protein [Yersinia pestis Z176003] gi|21957671|gb|AAM84516.1|AE013696_9 putative permease of ABC transporter [Yersinia pestis KIM 10] gi|45435386|gb|AAS60945.1| putative amino acid ABC transporter, permease protein [Yersinia pestis biovar Microtus str. 91001] gi|108774654|gb|ABG17173.1| amino acid ABC transporter, permease protein [Yersinia pestis Nepal516] gi|108780650|gb|ABG14708.1| putative amino acid ABC transporter, permease protein [Yersinia pestis Antiqua] gi|115348891|emb|CAL21848.1| putative amino acid ABC transporter, permease protein [Yersinia pestis CO92] gi|145211846|gb|ABP41253.1| amino acid ABC transporter, permease protein [Yersinia pestis Pestoides F] gi|149291317|gb|EDM41391.1| putative amino acid ABC transporter, permease protein [Yersinia pestis CA88-4125] gi|162353394|gb|ABX87342.1| amino acid ABC transporter, permease protein [Yersinia pestis Angola] gi|165916126|gb|EDR34733.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|165921543|gb|EDR38740.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165989969|gb|EDR42270.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205811|gb|EDR50291.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960434|gb|EDR56455.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167052204|gb|EDR63612.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057553|gb|EDR67299.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229681154|gb|EEO77248.1| putative amino acid ABC transporter, permease protein [Yersinia pestis Nepal516] gi|229687837|gb|EEO79910.1| putative amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695232|gb|EEO85279.1| putative amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700635|gb|EEO88665.1| putative amino acid ABC transporter, permease protein [Yersinia pestis Pestoides A] gi|262363035|gb|ACY59756.1| putative amino acid ABC transporter, permease protein [Yersinia pestis D106004] gi|262366959|gb|ACY63516.1| putative amino acid ABC transporter, permease protein [Yersinia pestis D182038] gi|270337917|gb|EFA48694.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294355430|gb|ADE65771.1| putative amino acid ABC transporter, permease protein [Yersinia pestis Z176003] gi|320016444|gb|ADW00016.1| putative amino acid ABC transporter, permease protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 217 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 53/151 (35%), Positives = 89/151 (58%), Gaps = 3/151 (1%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ Y +F+GTPLL+QLF+ F+GL GI + A ++LTL SA++ +I SI + Sbjct: 51 VVRLYTELFQGTPLLMQLFLAFFGLALFGIDVSPWTAAAMALTLFTSAFLVDIWCGSIAA 110 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +PKGQW+AS +GL+ QT+ +I PQ + + P + ++K T++AS I E+ + Sbjct: 111 LPKGQWEASRCLGLSFHQTLFRVIAPQAMRIAIAPTVGFSVQVIKGTALASIIGFVELTK 170 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + + TYQP ++ +A Y ++ CY Sbjct: 171 AGTMLNNVTYQPFKVFGLVALGYFLM---CY 198 >gi|320159034|ref|YP_004191412.1| arginine ABC transporterpermease ArtM [Vibrio vulnificus MO6-24/O] gi|319934346|gb|ADV89209.1| arginine ABC transporter, permease protein ArtM [Vibrio vulnificus MO6-24/O] Length = 222 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 65/217 (29%), Positives = 112/217 (51%), Gaps = 25/217 (11%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTIISLIMHFYVWIFRGTP 69 L +V +L + +S ++ I+ + I +FS +I+L F GTP Sbjct: 9 LLEGLVTSLELTAVSLLVGCILSLLMTATLILRTPLLHWFSRGVITL--------FTGTP 60 Query: 70 LLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIISIPKG 120 LLVQ+F+I+YG + DSFV +++L LN +AY +++ + + +IP G Sbjct: 61 LLVQIFLIYYGPGQFDAIRDSFVWQWLSQPWFCAMLALALNTAAYSTQLFKGAFNAIPSG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW A A+G+ + T++ ++LP + + S+E I + K TS+ASTITI ++ AQR Sbjct: 121 QWQACRALGMNKFVTLK-VLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYAQR 179 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 I + TY L ++ YL + + +I ++E Sbjct: 180 INAQTYDTLTVFGVAGAFYLTINAIMTLIFRQVEKKA 216 >gi|311107899|ref|YP_003980752.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 14 [Achromobacter xylosoxidans A8] gi|310762588|gb|ADP18037.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 14 [Achromobacter xylosoxidans A8] Length = 229 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/188 (32%), Positives = 110/188 (58%), Gaps = 8/188 (4%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ ++ + ++GF I VIR + + L + Y+ I RGTP LVQL++ ++ LP Sbjct: 23 TLKISFVAIIAGSLLGFVIGVIRSYRIRGVHQL-LGLYIHILRGTPFLVQLYIFYFVLPS 81 Query: 84 IGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 GI +DS A +SL++ S Y++EI+ +I ++P+GQ + + +GL Q +R +I Sbjct: 82 TGIEMLHWDSGTAAFVSLSVYTSCYVAEIVMGAIQAVPRGQTEGAMTLGLRPFQILRLVI 141 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR-IVSTTYQPLIIYCELAFVY 199 LPQ + P+S ++ ++KST++ S + I E+ + + I++ + L IY +A +Y Sbjct: 142 LPQAMRLIVQPMSGVYVMLIKSTAILSVVGITELTRQGEVFIITFPAKSLFIYGMIAAIY 201 Query: 200 LILTSFCY 207 I +CY Sbjct: 202 FI---YCY 206 >gi|325293714|ref|YP_004279578.1| octopine transport system permease protein occM [Agrobacterium sp. H13-3] gi|325061567|gb|ADY65258.1| octopine transport system permease protein occM [Agrobacterium sp. H13-3] Length = 229 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 110/191 (57%), Gaps = 22/191 (11%) Query: 33 VISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYG----LPHIG 85 VIS+ IGF +A+ F + ++ Y FRGTPLL+QL++++YG LP I Sbjct: 25 VISVSIGFLLAIGLAFAQVSGGRVTKILARAYCTFFRGTPLLIQLWLLYYGVGSFLPMIP 84 Query: 86 IVFDSFVAII---------ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 + SF+ + +S TLN++AY +E++R +++++PKG+ +A A G+ R I Sbjct: 85 GLRQSFMWPVLREGFFFAAVSFTLNYAAYEAEVLRGALLAVPKGELEAGRAFGMGRFTLI 144 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPLIIYC 193 R I LP+ I + ++ E + LK+T +A T+T+ +++ A ++ T Y+PLI+ Sbjct: 145 RRIWLPRAIRIALPTIAGEVVMQLKATPLAFTVTVMDLYAVAYKVRQDTLLVYEPLIV-- 202 Query: 194 ELAFVYLILTS 204 + YLILT+ Sbjct: 203 -VTVFYLILTA 212 >gi|320174663|gb|EFW49796.1| Histidine ABC transporter, permease protein HisM [Shigella dysenteriae CDC 74-1112] Length = 238 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 115/213 (53%), Gaps = 11/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + +S VI ++ F+A+ R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLILSVVIGGVLALFLAIGRVS-SNKYIQFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F ++ LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTEFLNAFFRSGLNCTVLGLTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I + TYQ Sbjct: 139 YGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P + A +YLI++ + + E QH Sbjct: 199 PFTAFGIAAVLYLIISYVLISLFRRAEKRWLQH 231 >gi|227877868|ref|ZP_03995884.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256844269|ref|ZP_05549755.1| glutamine ABC transporter permease [Lactobacillus crispatus 125-2-CHN] gi|262047651|ref|ZP_06020605.1| glutamine ABC transporter permease [Lactobacillus crispatus MV-3A-US] gi|293380559|ref|ZP_06626618.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] gi|295691987|ref|YP_003600597.1| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus crispatus ST1] gi|312976974|ref|ZP_07788723.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Lactobacillus crispatus CTV-05] gi|227862530|gb|EEJ70033.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256613347|gb|EEU18550.1| glutamine ABC transporter permease [Lactobacillus crispatus 125-2-CHN] gi|260572051|gb|EEX28617.1| glutamine ABC transporter permease [Lactobacillus crispatus MV-3A-US] gi|290922873|gb|EFD99816.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] gi|295030093|emb|CBL49572.1| Amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus crispatus ST1] gi|310896302|gb|EFQ45367.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Lactobacillus crispatus CTV-05] Length = 494 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/183 (32%), Positives = 109/183 (59%), Gaps = 7/183 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I S +I +I+G +A++R+ + ++ I Y+ RGTP +VQ+ +++G+ Sbjct: 298 TIVITIFSVLIGIILGMLLALMRLS-KNKLLHWIAVCYIEFIRGTPQMVQILFVYFGVGA 356 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + + VA II++ LN AY++E IRS I S+ KGQ +A+ ++GL++ + R++I+PQ Sbjct: 357 LISNLSAVVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLGLSQAKAYRYVIIPQ 416 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCELAFVYL 200 + L +EFI++LK +S+ S I + E+ + I ++TY+ PL I +Y Sbjct: 417 ALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGVLPLFIAM---IIYF 473 Query: 201 ILT 203 I+T Sbjct: 474 IMT 476 >gi|15965625|ref|NP_385978.1| amino acid ABC transporter permease [Sinorhizobium meliloti 1021] gi|307314029|ref|ZP_07593642.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|307321206|ref|ZP_07600608.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|15074806|emb|CAC46451.1| Hypothetical amino-acid ABC transporter permease [Sinorhizobium meliloti 1021] gi|306893108|gb|EFN23892.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306899151|gb|EFN29790.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 276 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/212 (27%), Positives = 118/212 (55%), Gaps = 12/212 (5%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S ++ ++ +A+ R+ + + + + YV+ FRGTPL+ QLF+I+ Sbjct: 64 SGLGVTLTLVISSILMGAVLSLPVALGRMS-KNRLWGWLAYAYVYFFRGTPLITQLFLIY 122 Query: 79 YGLPH-------IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 YGL +G+ + D++ + + TLN +AY +EI+R +I S+P+GQ + + A+ Sbjct: 123 YGLGSFRPQLETVGLWWFFRDAWNCALFTFTLNTAAYQAEILRGAIESVPRGQREGAAAL 182 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL + +ILPQ + + P +E I ++K +++ + +T+ ++ +R S T+ Sbjct: 183 GLPERVAFFKVILPQAMIVALRPYGNEIILMIKGSAIVAIVTVFDLMGETRRAFSRTFD- 241 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +Y A +YL++ I +E+ +T+H Sbjct: 242 YQMYIWAAILYLLMVELLRNIWGWLEARLTRH 273 >gi|242238358|ref|YP_002986539.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242130415|gb|ACS84717.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 218 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 51/151 (33%), Positives = 88/151 (58%), Gaps = 3/151 (1%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + Y +F+GTPLL+QLF+ F+GL GI + A ++LTL SA++ +I S+++ Sbjct: 52 LTRLYADVFQGTPLLMQLFLAFFGLGLFGIDVSPWTAAALALTLFTSAFLVDIWHGSVLA 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +PKGQW+A +GLT QT+ ++ PQ + + P + ++K T++AS I E+ + Sbjct: 112 LPKGQWEACRCLGLTFTQTLTRVVAPQAMRIAIAPTVGFSVQVIKGTALASIIGFVELTK 171 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + + T+QP ++ +A Y +L CY Sbjct: 172 AGTMLNNVTFQPFKVFGLVALGYFLL---CY 199 >gi|324324680|gb|ADY19940.1| amino acid ABC transporter, permease protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 218 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ + +V R PL++ F+ ++ LP +GI Sbjct: 25 SVIALIGSFILGIILAVMRIA-PIRILNWLGATFVEFVRNIPLVLIAFIFYFALPVVGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + H++LPQ + Sbjct: 84 LNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQAMYHVVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|317403731|gb|EFV84216.1| amino acid ABC transporter [Achromobacter xylosoxidans C54] Length = 229 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/188 (31%), Positives = 110/188 (58%), Gaps = 8/188 (4%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ ++ + ++GF I VIR + + L + Y+ + RGTP LVQL++ ++ LP Sbjct: 23 TLKISFVAIIAGSLLGFVIGVIRSYRVRGLHQL-LGLYIHVLRGTPFLVQLYIFYFVLPG 81 Query: 84 IGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 GI +DS A +SL++ S Y++EI+ +I ++P+GQ + + +GL Q +R +I Sbjct: 82 TGIALLHWDSATAAFVSLSVYTSCYVAEIVSGAIRAVPRGQTEGAMTLGLRPLQILRLVI 141 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR-IVSTTYQPLIIYCELAFVY 199 LPQ + P+S ++ ++KST++ S + I E+ + + I++ + L IY +A +Y Sbjct: 142 LPQAMRLIVQPMSGVYVMLIKSTAILSVVGITELTRQGEVFIITFPAKSLFIYGLIAAIY 201 Query: 200 LILTSFCY 207 + +CY Sbjct: 202 FL---YCY 206 >gi|226313305|ref|YP_002773199.1| arginine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226096253|dbj|BAH44695.1| arginine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 219 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 110/198 (55%), Gaps = 6/198 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + IS V+ G +A+I+I + +++ + Y +FRGTPL++QL +++ P Sbjct: 22 TLLVTLISVVLGFFWGSILALIKIS-NVKLLNWLAVAYTSVFRGTPLILQLTFVYFATPQ 80 Query: 84 I-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + G A +++ TLN AYISE IR I+++ KGQW+A+ A+G+ + + IILP Sbjct: 81 LTGYNISQLEAAVLTFTLNSGAYISETIRGGILAVDKGQWEAAKALGVPYHRMMLDIILP 140 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY--- 199 Q + L +E I++LK +++ STI + +I Q A + T ++ Y +Y Sbjct: 141 QAVKNILPALVNETIALLKESALVSTIGLADIMQNANVVKGTIFRYFEPYMMAGILYYVM 200 Query: 200 -LILTSFCYIIQIKIESS 216 +ILT +++ ++ S Sbjct: 201 VMILTWVARVLERRMRLS 218 >gi|90412873|ref|ZP_01220873.1| putative ABC-type arginine/histidine transport system, permease component [Photobacterium profundum 3TCK] gi|90326232|gb|EAS42659.1| putative ABC-type arginine/histidine transport system, permease component [Photobacterium profundum 3TCK] Length = 225 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 70/224 (31%), Positives = 120/224 (53%), Gaps = 16/224 (7%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 +E ++L +D F + T+ + ++ VI LII + + R + +I Y+ Sbjct: 7 FESWDLYLDGF--------ITTVWMVAVALVIGLIIAIPVGIARNS-KNPMIYFPAWAYI 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHI----GIVF-DSFVAIIISLTLNFSAYISEIIRSSIISI 117 + FRGTPLL+QL++++YGL + G ++ +++ + LN +AY SEIIR +I S+ Sbjct: 58 YFFRGTPLLIQLYLVYYGLSQLIEVQGTLWQEAWFCALFVFILNTAAYTSEIIRGAINSL 117 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKG+ +A+ A G++ Q R IILP + + S+E I ++ ++VA +TI ++ Sbjct: 118 PKGEIEAAKAYGMSTPQAFRRIILPSAMRRALPAYSNEVIFMVHGSAVAGIVTIVDLTGA 177 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQI-KIESSVTQH 220 A+ + S Y P Y Y++LT F I K+E QH Sbjct: 178 ARIVNSRYYAPFESYLFAGMCYMVLT-FTIIWGFKKLEQHWLQH 220 >gi|229587793|ref|YP_002869912.1| putative amino acid ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229359659|emb|CAY46507.1| putative amino acid ABC transport-system, membrane protein [Pseudomonas fluorescens SBW25] Length = 219 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 112/196 (57%), Gaps = 3/196 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M L+ S PQL A TL I+ +S S + G V+R ++ +I+ ++ Sbjct: 1 MASSGLELLWVSLPQLGKGA-AQTLSISFLSIAFSTVGGVLYGVLRTL-NNRLINAVLRV 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ +FR P+LV L+++F+GLP G+ SF ++ L+L ++ + E++R ++ S+P+ Sbjct: 59 YLELFRAIPVLVWLYLLFFGLPIFFGLSIPSFWCAVLVLSLWGASEVGEVVRGALHSLPR 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A +IGL+ Q +++LPQ + P + + I+K++S+A I + ++ + Q Sbjct: 119 GQREAGLSIGLSDPQLYGYVLLPQALKRMTPPTINVYTRIIKTSSLAVLIGVVDVIKVGQ 178 Query: 180 RIVSTTYQPLIIYCEL 195 +I+ TY+ ++IY L Sbjct: 179 QIIERTYESVLIYGVL 194 >gi|225620483|ref|YP_002721740.1| amino acid transport system permease [Brachyspira hyodysenteriae WA1] gi|225215302|gb|ACN84036.1| amino acid transport system permease protein [Brachyspira hyodysenteriae WA1] Length = 237 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 119/205 (58%), Gaps = 15/205 (7%) Query: 28 ACISFVISLIIGFFIAVIRIF----FSDTI-------ISLIMHFYVWIFRGTPLLVQLFV 76 AC + VI +I+G +A++++ F ++ +S + +YV I RGTP++VQL + Sbjct: 33 ACAT-VIGIILGILVALLQLSEFYPFKNSKKLRDFNPLSKLAFWYVNILRGTPVVVQL-M 90 Query: 77 IFYGLPHIGIVFDSFVAII--ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 I+ + + + D+ + II I+ +N AY++EIIR+ I S+ KGQ +A+ A+G+ Sbjct: 91 IWANVIFVDNLRDTPILIIAAIAFGINSGAYVAEIIRAGIQSLDKGQMEAARALGMNYSM 150 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 +++ II+PQ I PL SEFI++LK TSV I ++ ++A I S TY+ + Sbjct: 151 SMKEIIIPQAIKKILPPLVSEFIALLKETSVVGFIGGVDLLRSANIITSQTYRGVEPLIA 210 Query: 195 LAFVYLILTSFCYIIQIKIESSVTQ 219 + +Y ILTS +I K+E + + Sbjct: 211 VGIIYFILTSVFAMIMKKVEEGLRE 235 >gi|218705837|ref|YP_002413356.1| histidine/lysine/arginine/ornithine ABC transporter membrane protein [Escherichia coli UMN026] gi|293405773|ref|ZP_06649765.1| histidine ABC transporter [Escherichia coli FVEC1412] gi|298381456|ref|ZP_06991055.1| histidine transport system permease hisM [Escherichia coli FVEC1302] gi|300896989|ref|ZP_07115468.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|331663823|ref|ZP_08364733.1| histidine transport system permease protein HisM [Escherichia coli TA143] gi|331673810|ref|ZP_08374573.1| histidine transport system permease protein HisM [Escherichia coli TA280] gi|218432934|emb|CAR13828.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily [Escherichia coli UMN026] gi|284922295|emb|CBG35380.1| histidine ABC transporter, permease protein [Escherichia coli 042] gi|291427981|gb|EFF01008.1| histidine ABC transporter [Escherichia coli FVEC1412] gi|298278898|gb|EFI20412.1| histidine transport system permease hisM [Escherichia coli FVEC1302] gi|300359170|gb|EFJ75040.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|331059622|gb|EGI31599.1| histidine transport system permease protein HisM [Escherichia coli TA143] gi|331069083|gb|EGI40475.1| histidine transport system permease protein HisM [Escherichia coli TA280] Length = 238 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 116/213 (54%), Gaps = 11/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + +S VI ++ F+A+ R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLILSVVIGGVMALFLAIGRVS-SNKYIQFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTEFLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I + TYQ Sbjct: 139 YGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P + A +YLI++ + + E QH Sbjct: 199 PFTAFGIAAVLYLIISYVLISLFRRAEKRWLQH 231 >gi|108760413|ref|YP_633646.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease/periplasmic amino acid-binding protein [Myxococcus xanthus DK 1622] gi|108464293|gb|ABF89478.1| amino acid ABC transporter, permease protein/periplasmic amino acid-binding protein, His/Glu/Gln/Arg/opine family [Myxococcus xanthus DK 1622] Length = 481 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 97/161 (60%), Gaps = 8/161 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 + W L+ L A VTL ++ + V+++ +G +A+ R++ L Y Sbjct: 271 RMGWGQLV------LFLQAAGVTLLVSVGAMVLAIPLGVGLALTRLYGPGWAARLSTA-Y 323 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V +FRGTP+L+QL+V++YGL + + D A I+ L LN++AY SE+ R+ ++++P+GQ Sbjct: 324 VELFRGTPVLLQLYVLYYGLAGV-LRLDPISAAILGLGLNYAAYESEVYRAGVLAVPRGQ 382 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +A+ A+G+ + +R +ILPQ + ++++FI++LK Sbjct: 383 LEAAMALGMPLRLALRRVILPQAFRVALPGVANDFIALLKD 423 >gi|331658390|ref|ZP_08359352.1| histidine transport system permease protein HisM [Escherichia coli TA206] gi|331056638|gb|EGI28647.1| histidine transport system permease protein HisM [Escherichia coli TA206] Length = 227 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 116/213 (54%), Gaps = 11/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + +S VI ++ F+A+ R+ S+ I + + +IFRGTPL VQL V Sbjct: 9 FTGVAITLWLLILSVVIGGVLALFLAIGRVS-SNKYIQFPIWLFTYIFRGTPLYVQLLVF 67 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 68 YSGMYTLEIVKGTEFLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 127 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I + TYQ Sbjct: 128 YGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQ 187 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P + A +YLI++ + + E QH Sbjct: 188 PFTAFGIAAVLYLIISYVLISLFRRAEKRWLQH 220 >gi|88596128|ref|ZP_01099365.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 84-25] gi|88190969|gb|EAQ94941.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 84-25] Length = 250 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/193 (32%), Positives = 110/193 (56%), Gaps = 14/193 (7%) Query: 20 AIVVTLPIACISFVISLI---IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 + TL ++ ++ +I+ I IG +A R II YV +F+ PL++Q+F Sbjct: 47 GFIYTLEVSILALLIATIFGTIGGVMATSRF----KIIRAYTRIYVELFQNVPLVIQIFF 102 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +FY LP +GI D F ++ + + AY+SE++RS I+++P+GQ++AS + G T Q + Sbjct: 103 LFYALPVLGIRLDIFTIGVLGVGVYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQQM 162 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST--TYQPLIIYCE 194 R+II+PQTI P++++ ++++K+TSV + E+ +A + Y P I+ Sbjct: 163 RYIIVPQTIRIILPPMTNQMVNLIKNTSVLLIVGGAELMHSADSYAADYGNYAPAYIFA- 221 Query: 195 LAFVYLILTSFCY 207 A +Y I+ CY Sbjct: 222 -AVLYFII---CY 230 >gi|312958335|ref|ZP_07772856.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311287399|gb|EFQ65959.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 219 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 111/196 (56%), Gaps = 3/196 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M L+ S PQL A TL I+ +S S + G V+R S +I+ ++ Sbjct: 1 MASSGLELLWVSLPQLGKGA-AQTLSISFLSIAFSTVCGVLYGVLRTLNSK-LINAVLRV 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ +FR P+LV L+++F+G+P G+ SF ++ L+L ++ + E++R ++ S+P+ Sbjct: 59 YLELFRAIPVLVWLYLLFFGMPIFFGLSIPSFWCAVLVLSLWGASEVGEVVRGALHSLPR 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A +IGL+ Q +++LPQ + P + + I+K++S+A I + ++ + Q Sbjct: 119 GQREAGLSIGLSDPQLYGYVLLPQALKRMTPPTINVYTRIIKTSSLAVLIGVVDVIKVGQ 178 Query: 180 RIVSTTYQPLIIYCEL 195 +I+ TY+ ++IY L Sbjct: 179 QIIERTYESVLIYGAL 194 >gi|90579332|ref|ZP_01235142.1| putative ABC-type arginine/histidine transport system, permease component [Vibrio angustum S14] gi|90440165|gb|EAS65346.1| putative ABC-type arginine/histidine transport system, permease component [Vibrio angustum S14] Length = 229 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 114/202 (56%), Gaps = 6/202 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + +S VI LI I ++R S+ I+ Y++ FRGTPLL+QL++I+YGL Sbjct: 20 TVWMVTVSLVIGLICAIPIGMMRNS-SNKFIAFPAWAYIYFFRGTPLLIQLYLIYYGLSQ 78 Query: 84 I----GIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 + G ++ +++ +++ LN +AY +EIIR SI S+P+G+ +A+ A G++ Q R Sbjct: 79 VINVQGTMWQEAWFCALVAFILNTAAYTAEIIRGSINSMPQGEIEAAKAYGMSPFQAFRR 138 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 IILP + + S+E I ++ ++VA +TI ++ A+ + S Y P + Sbjct: 139 IILPSALRRALPAYSNEVIFMVHGSAVAGIVTIVDLTGAARIVNSRYYAPFESFLFAGLC 198 Query: 199 YLILTSFCYIIQIKIESSVTQH 220 Y++LT + K+E+ +H Sbjct: 199 YMVLTFAIIWVFKKLEARYLRH 220 >gi|256849332|ref|ZP_05554765.1| glutamine ABC transporter permease [Lactobacillus crispatus MV-1A-US] gi|256714108|gb|EEU29096.1| glutamine ABC transporter permease [Lactobacillus crispatus MV-1A-US] Length = 494 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/183 (32%), Positives = 109/183 (59%), Gaps = 7/183 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I S +I +I+G +A++R+ + ++ I Y+ RGTP +VQ+ +++G+ Sbjct: 298 TIVITIFSVLIGIILGMLLALMRLS-KNKLLHWIAVCYIEFIRGTPQMVQILFVYFGVGA 356 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + + VA II++ LN AY++E IRS I S+ KGQ +A+ ++GL++ + R++I+PQ Sbjct: 357 LISNLSAVVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLGLSQAKAYRYVIIPQ 416 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCELAFVYL 200 + L +EFI++LK +S+ S I + E+ + I ++TY+ PL I +Y Sbjct: 417 ALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGVLPLFIAM---IIYF 473 Query: 201 ILT 203 I+T Sbjct: 474 IMT 476 >gi|225574974|ref|ZP_03783584.1| hypothetical protein RUMHYD_03053 [Blautia hydrogenotrophica DSM 10507] gi|225037821|gb|EEG48067.1| hypothetical protein RUMHYD_03053 [Blautia hydrogenotrophica DSM 10507] Length = 220 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 102/167 (61%), Gaps = 11/167 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFD---SFVAIIISLTLNFSAYISEIIRSSII 115 Y+ + RGTPL++QL V+++G P+ GI S +A++I +LN++AY +EI R I Sbjct: 57 YISVMRGTPLMLQLMVVYFG-PYFFFGISITQGYSMIAVLIGFSLNYAAYFAEIYRGGIE 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+P GQ++A+ +G + QT HIILPQ I +++E I+++K TS+A + + E+F Sbjct: 116 SMPVGQYEAAQILGYKKSQTFVHIILPQVIKRILPAVTNEVITLVKDTSLAFVLAVAEMF 175 Query: 176 QTAQRIVS--TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 A++I S TT P +I +V+ +L + ++ KIE ++ + Sbjct: 176 TIAKQIASSQTTMMPFVIAAVFYYVFNLLVA---VVMDKIEKRLSYY 219 >gi|186472110|ref|YP_001859452.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184194442|gb|ACC72406.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 248 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 106/193 (54%), Gaps = 1/193 (0%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D + +L + VTL + IS V+ ++G AV+ LI YV R TP Sbjct: 11 DLYAGMLVRGVGVTLGLTAISTVLGGLVGMAGAVVAASGPKWARWLIAG-YVEAIRNTPF 69 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LVQLF +F+GLP +GI D A I+++T+N AY EI+R+ I SIP+GQ A+ A+GL Sbjct: 70 LVQLFFVFFGLPSLGIHIDEIQAAILAMTVNLGAYAIEIVRAGIDSIPRGQVQAAQALGL 129 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 +Q RH++LPQ I L S+ + ++ ++V S I++P++ A I S ++ Sbjct: 130 QGRQVFRHVVLPQAIANVFPALLSQVLIVMLGSAVVSQISVPDLTYAANYIQSRNFRSFE 189 Query: 191 IYCELAFVYLILT 203 Y + YL L+ Sbjct: 190 AYVIITATYLALS 202 >gi|313891667|ref|ZP_07825274.1| putative glutamine ABC transporter, permease protein GlnP [Dialister microaerophilus UPII 345-E] gi|329122023|ref|ZP_08250632.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Dialister micraerophilus DSM 19965] gi|313119945|gb|EFR43130.1| putative glutamine ABC transporter, permease protein GlnP [Dialister microaerophilus UPII 345-E] gi|327467075|gb|EGF12587.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Dialister micraerophilus DSM 19965] Length = 217 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 84/139 (60%), Gaps = 3/139 (2%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVF--DSFVAIIISLTLNFSAYISE 108 ++I + Y++I RGTPL++Q+ I+YGLP I G F + F + II+ N++AY +E Sbjct: 45 SVIKNLAGVYIYIMRGTPLMLQILFIYYGLPLILGNSFQMNDFSSAIIAFVANYAAYFAE 104 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I R I SI KGQ++ + +G QT+R+IILPQ + PL +E I++LK TS+ Sbjct: 105 IFRGGIQSIGKGQYEGAQVLGFNYSQTMRYIILPQVVKRVLPPLGNETITLLKDTSLVYI 164 Query: 169 ITIPEIFQTAQRIVSTTYQ 187 + + ++ + + IV + Sbjct: 165 LAMNDLMRVTRSIVQRDFD 183 >gi|294101062|ref|YP_003552920.1| polar amino acid ABC transporter, inner membrane subunit [Aminobacterium colombiense DSM 12261] gi|293616042|gb|ADE56196.1| polar amino acid ABC transporter, inner membrane subunit [Aminobacterium colombiense DSM 12261] Length = 224 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 117/201 (58%), Gaps = 3/201 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E +++ S P LL +V TL I ++ + L +G +A+ +++ S +I ++ YVW Sbjct: 2 ENIEVVVQSLPYLLQGTLV-TLRIVALALALGLCMGLPLAIGQVYGSASIQKMV-KAYVW 59 Query: 64 IFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 IFRG P LV LF+ F+G+ P + I +F ++ L L +AY S+I R SI+S+ +GQ Sbjct: 60 IFRGLPNLVLLFLFFFGIFPSLRIDASAFSTAVVVLGLRSAAYQSQIFRGSILSLGEGQM 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A+ ++G+ + Q I IILPQ + + S+E+ +L +SV I + EI A +V Sbjct: 120 LAARSLGMNKLQAIIWIILPQALRIALPGWSNEYPILLTDSSVTYAIGVLEILTRANLVV 179 Query: 183 STTYQPLIIYCELAFVYLILT 203 S TY+P+ I+ A ++++L Sbjct: 180 SRTYKPMPIFLTCAIIFILLN 200 >gi|239944222|ref|ZP_04696159.1| putative arginine/ornithine ABC transporter permease protein [Streptomyces roseosporus NRRL 15998] gi|239990678|ref|ZP_04711342.1| putative arginine/ornithine ABC transporter permease protein [Streptomyces roseosporus NRRL 11379] gi|291447694|ref|ZP_06587084.1| permease [Streptomyces roseosporus NRRL 15998] gi|291350641|gb|EFE77545.1| permease [Streptomyces roseosporus NRRL 15998] Length = 322 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 102/178 (57%), Gaps = 13/178 (7%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFY--------GLP-----HIGIVFDSFVAIII 96 + + S + Y+W FRGTP+ VQL + F +P + V F+ ++ Sbjct: 109 KNPVTSWVAWLYIWFFRGTPVYVQLLLWFNLALIFPVLNIPFIYKDEMTDVMTPFMCALL 168 Query: 97 SLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF 156 L LN +AY++EI R+ I S+ +GQ +AS+A+G+T+ +T+R ++LPQ + P +EF Sbjct: 169 GLALNEAAYMAEICRAGIQSVDEGQTEASHALGMTQAKTMRRVVLPQALRVIIPPTGNEF 228 Query: 157 ISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I++LK++S+ +T E+ ++ +I ST+Y + + + Y+++TS + Q +E Sbjct: 229 INMLKTSSLVYAVTYNELLRSTSQIGSTSYAVMEMLFVASIWYIVMTSVFSVGQYYLE 286 >gi|160938084|ref|ZP_02085441.1| hypothetical protein CLOBOL_02979 [Clostridium bolteae ATCC BAA-613] gi|158439078|gb|EDP16833.1| hypothetical protein CLOBOL_02979 [Clostridium bolteae ATCC BAA-613] Length = 226 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/222 (29%), Positives = 122/222 (54%), Gaps = 13/222 (5%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIF 65 N+I +P + A+ +TL + IS + + ++G + ++ SD ++ L+ Y+ I Sbjct: 5 NIITQYYPSF-FKALGITLQMTVISLLCATVLGVIFGLFKV--SDFKVLKLVADVYIDII 61 Query: 66 RGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 RGTPLLVQ+ ++ YG+ + + +F A ++L+LN AY++EIIR I ++ Sbjct: 62 RGTPLLVQVMIMMYGVGSVLKPYGFQWSNIGGAFTAGCVALSLNAGAYMAEIIRGGIEAV 121 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ +A+ ++GL+ + +R +ILPQ T + ++FI LK TS+ S I E+ Q Sbjct: 122 DKGQMEAARSLGLSYGKAMRKVILPQAFRTMLPSIINQFIISLKDTSLVSVIGPRELTQN 181 Query: 178 AQRIVSTTYQPLI-IYCELAFVYLILTSFCYIIQIKIESSVT 218 + I + + ++ I+ +A YL++ + I +E V+ Sbjct: 182 GKIIAANSASMVMPIWICVALFYLVVCTILSRIAKYVERRVS 223 >gi|315647911|ref|ZP_07901012.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus vortex V453] gi|315276557|gb|EFU39900.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus vortex V453] Length = 209 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 47/131 (35%), Positives = 81/131 (61%), Gaps = 5/131 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGI-----VFDSFVAIIISLTLNFSAYISEIIRSSII 115 Y+++FRGTPLL+Q+ +GLP + + V D FVA ++ LN++AY +EI R ++ Sbjct: 56 YIYVFRGTPLLLQMLFFCFGLPVLPVIGEYLVLDRFVAACLAFVLNYAAYFAEIFRGGLL 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +I KGQ++AS +GL + QT +ILPQ + +S+E I+++K T++ + +PE+ Sbjct: 116 AIDKGQYEASKVLGLNKWQTTTKVILPQMFRVALPAVSNESITLVKDTALLYAVAVPELL 175 Query: 176 QTAQRIVSTTY 186 A V+ + Sbjct: 176 HFAYTAVNRDF 186 >gi|163789533|ref|ZP_02183971.1| hypothetical protein CAT7_08825 [Carnobacterium sp. AT7] gi|159875065|gb|EDP69131.1| hypothetical protein CAT7_08825 [Carnobacterium sp. AT7] Length = 483 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 125/220 (56%), Gaps = 13/220 (5%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---DTIISLIMHFY 61 +F LI + +LL + TL + +F+I+ I+G VI FS + +++ I Y Sbjct: 269 FFGLIQQNGGELL-KGLGRTLLLTITAFIIATILG----VIFGLFSASPNKVLNWIATIY 323 Query: 62 VWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V I RG PL+V F I++ +P + I +++A +I+L+LN +AYI+E++R I ++ G Sbjct: 324 VDILRGIPLIVLAFFIYFSIPQFLNIQIPAYLAGVITLSLNTTAYIAELVRGGIQAVDNG 383 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS ++GLT ++R ++LPQ + ++F+ LK TS+ S I I E+ QT + Sbjct: 384 QLEASRSLGLTYNTSMRKVVLPQAVKIMIPSFINQFVITLKDTSILSVIGIVELTQTGKI 443 Query: 181 IVSTTYQPLIIYCELAFVYL----ILTSFCYIIQIKIESS 216 I++ TY ++ + +Y+ ILT F ++ ++ + Sbjct: 444 IIARTYSSGDMWLIVGLMYIIIITILTKFSNYLERRLSND 483 >gi|332717198|ref|YP_004444664.1| amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] gi|325063883|gb|ADY67573.1| amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 216 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 94/143 (65%), Gaps = 2/143 (1%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 ++ IF+GTPLL+QLFV++YG+ G+ D+++A+ I+ TL+ SA++ EI R I ++PKG Sbjct: 55 FIAIFQGTPLLMQLFVVYYGVALAGLNVDAWIAVAIAFTLHASAFLGEIWRGGIQAVPKG 114 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF-ISILKSTSVASTITIPEIFQTAQ 179 Q +A+ A+GL ++ ++LPQ S +P + F + ++K TS+A+ + E+ + Q Sbjct: 115 QTEAANALGLHYLSRMKDVVLPQAFKIS-LPATIGFLVQLIKGTSLAAIVGFVELSRAGQ 173 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 + + T++PL ++ + +Y ++ Sbjct: 174 IVSNQTFRPLTVFAIVGIMYFLI 196 >gi|283479444|emb|CAY75360.1| putative ABC transport system, inner membrane component [Erwinia pyrifoliae DSM 12163] Length = 225 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 96/175 (54%), Gaps = 18/175 (10%) Query: 48 FFSDTIISL---------------IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV 92 FF T+++L I+ YV +F+GTPLL+QLF+ F+G+ GI + Sbjct: 35 FFGGTLVALPLVRLRLAGRLWPNRIIRAYVELFQGTPLLMQLFLAFFGVALFGIDLSPWA 94 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 A ++LT SA++ +I SI ++PKGQW+A +GL+ QT+ ++LPQ + + P Sbjct: 95 AAALALTCYTSAFLVDIWYGSIKALPKGQWEACRCLGLSSGQTLFRVVLPQALRVAIAPT 154 Query: 153 SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + ++K T++AS I E+ + + + TYQP ++ +A Y ++ CY Sbjct: 155 VGFAVQVVKGTALASIIGFIELTKAGTILNNVTYQPFKVFGLVALGYFLM---CY 206 >gi|171315680|ref|ZP_02904914.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171099212|gb|EDT43985.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 500 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 123/218 (56%), Gaps = 14/218 (6%) Query: 1 MKYEW---FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI 57 M+++W F L+ D + + A VV + ++ +++++ ++IGF +A+ R ++ Sbjct: 1 MQFDWHYAFQLLWD---KDFWRACVVVVELSVVAWLLGVLIGFPVALARQSHR-PLLKRA 56 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRS 112 Y+W FR PLLV L V Y LP + ++ D F A +I++ L+ +AY +EI R Sbjct: 57 AAVYIWFFRSLPLLV-LLVFIYNLPQVFPATSAVLSDPFTAGLIAMVLSETAYFAEIHRG 115 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I+S+P+GQ +A A+G+ R I++PQ I + L++EFI+I+K TS+ S I++ Sbjct: 116 GILSVPRGQLEAGRALGIRFAGIQRMIVMPQAIRIALPALANEFITIVKLTSLVSVISLA 175 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVY-LILTSFCYII 209 EI QR+ + + +AF Y LI+T F ++ Sbjct: 176 EILLVGQRLYTQNFLVFETMLAVAFYYVLIVTVFSRLL 213 >gi|326328668|ref|ZP_08195008.1| amino acid ABC transporter, permease protein [Nocardioidaceae bacterium Broad-1] gi|325953629|gb|EGD45629.1| amino acid ABC transporter, permease protein [Nocardioidaceae bacterium Broad-1] Length = 298 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/174 (35%), Positives = 98/174 (56%), Gaps = 12/174 (6%) Query: 59 HFYVWIFRGTPLLVQL---FVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYI 106 YV + RG P LVQL F + Y +P + + F S+ A II L+L+ SAY+ Sbjct: 108 QLYVGLLRGVPPLVQLIFWFNLAYLVPRLSVGFASWSVNDLITPLTAAIIGLSLHESAYM 167 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EIIR+ I+S+ GQ DA+ A+G + +QT ++LPQ + P S+FI++LK TS+ Sbjct: 168 AEIIRAGIMSVDSGQRDAARAMGYSGRQTFWKVVLPQALRVIVPPSGSQFIALLKGTSLV 227 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S IT+ ++ + Q I TYQ + + YLI+ + ++Q +IE + + Sbjct: 228 SVITLTDLLYSVQIIYGRTYQVVPLLLVAVIWYLIVVTLLTLVQRRIERRLGRG 281 >gi|171743321|ref|ZP_02919128.1| hypothetical protein BIFDEN_02452 [Bifidobacterium dentium ATCC 27678] gi|306823266|ref|ZP_07456642.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium dentium ATCC 27679] gi|309801894|ref|ZP_07696009.1| ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] gi|171278935|gb|EDT46596.1| hypothetical protein BIFDEN_02452 [Bifidobacterium dentium ATCC 27678] gi|304553898|gb|EFM41809.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium dentium ATCC 27679] gi|308221450|gb|EFO77747.1| ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] Length = 514 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/187 (30%), Positives = 108/187 (57%), Gaps = 3/187 (1%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K + L S P L+ + TL I ISF I+L++G ++R+ + + S + Y Sbjct: 298 KVGFLGLAKQSLPALMIG-LKNTLFITVISFAIALLLGVAFGLMRVG-ENRVASGVSKVY 355 Query: 62 VWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V IFRGTP+LV F ++G+P IG + ++A ++L+LN AY++EI+R +I ++ G Sbjct: 356 VAIFRGTPILVWAFFFYFGVPQLIGHSVNIWIAGALTLSLNSGAYLAEIVRGAIQAVDPG 415 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q + + ++GL R+Q++ +ILPQ + + ++ + ++K +S+ I E+ AQ+ Sbjct: 416 QMEGARSLGLNRRQSMARVILPQASKIAMPSVINQLVIMIKDSSLLLAIGFGELLYQAQQ 475 Query: 181 IVSTTYQ 187 + + ++ Sbjct: 476 LYAANFR 482 >gi|108799999|ref|YP_640196.1| amino acid ABC transporter permease [Mycobacterium sp. MCS] gi|119869124|ref|YP_939076.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium sp. KMS] gi|108770418|gb|ABG09140.1| amino acid ABC transporter membrane protein, PAAT family [Mycobacterium sp. MCS] gi|119695213|gb|ABL92286.1| amino acid ABC transporter membrane protein, PAAT family [Mycobacterium sp. KMS] Length = 307 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/175 (37%), Positives = 98/175 (56%), Gaps = 23/175 (13%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-P------HIGIVFD-------------SFVAIIISLTL 100 Y+WIFRGTP+ VQL +F+GL P IGI F SF II L L Sbjct: 106 YLWIFRGTPVYVQL--VFWGLFPTLYQNIRIGIPFGPSFFEMNLQGLSISFTLAIIGLGL 163 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N +AY++EIIR+ I S+P+GQ +AS A+G++ T+R +LPQ + P +E IS+L Sbjct: 164 NEAAYMAEIIRAGISSVPEGQSEASTALGMSWTMTMRRTVLPQAMRVIIPPTGNEIISML 223 Query: 161 KSTSVASTITIP-EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 K+TS+ + + E++ A+ I +QP+ + A YL +TS + Q +E Sbjct: 224 KTTSLVTAVPYSMELYGRARDIAGVIFQPIPLLMVAATWYLAITSVLMVGQYYLE 278 >gi|301628866|ref|XP_002943567.1| PREDICTED: hypothetical protein LOC100491525 [Xenopus (Silurana) tropicalis] Length = 800 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 56/165 (33%), Positives = 98/165 (59%), Gaps = 2/165 (1%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 ++ P LL A VVT+ + +SF++S +IG +A+ ++ S I+ + + RG P Sbjct: 1 MEFLPILLRGA-VVTVQVTVLSFLLSSVIGLLLALGKLS-SVRAIAACAATVINVIRGLP 58 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 ++VQLF I++ LP +GI +F A +I L + +SAY +E R+ I ++ GQ +A+ A+G Sbjct: 59 IIVQLFYIYFVLPDVGIQLTAFQAGVIGLGIAYSAYQAENFRAGIEAVDPGQREAALAMG 118 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 + +R +ILPQ + P + + +LK +S+ STIT+ E+ Sbjct: 119 MRPMLLMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEM 163 >gi|225019523|ref|ZP_03708715.1| hypothetical protein CLOSTMETH_03476 [Clostridium methylpentosum DSM 5476] gi|224947744|gb|EEG28953.1| hypothetical protein CLOSTMETH_03476 [Clostridium methylpentosum DSM 5476] Length = 223 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/141 (36%), Positives = 84/141 (59%) Query: 47 IFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYI 106 I+F + S + Y+ + R TPLL+QLF +FYGLP IG++ + +I L+ +Y+ Sbjct: 42 IYFRVRVFSRVAKIYIELSRNTPLLIQLFFLFYGLPKIGVMISAQACAVIGLSFLGGSYM 101 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +E RS ++ K Q +A +IGLTR+Q R+IILPQ + S L++ I +LK TS+ Sbjct: 102 AESFRSGFEAVGKTQLEAGMSIGLTRRQLTRYIILPQAFSVSIPSLTANAIFLLKETSIF 161 Query: 167 STITIPEIFQTAQRIVSTTYQ 187 S I + ++ A+ ++ Y+ Sbjct: 162 SAIALADLMFVAKDLIGMYYK 182 >gi|218679442|ref|ZP_03527339.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli CIAT 894] Length = 215 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 105/186 (56%), Gaps = 9/186 (4%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF---------VAIIISLTL 100 + ++S Y+++FRG+PLL+Q+F++FYGL G++ SF V I+SL L Sbjct: 26 GNRVLSGFAKGYIFVFRGSPLLIQMFLVFYGLGQFGVIRYSFLWPFLREPMVCAILSLAL 85 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 + Y +EI R I ++ + +A+ +IG++ +R I+ P + S+E + ++ Sbjct: 86 CTAGYTAEIFRGGIRAVSPKEIEAARSIGMSGFLLVRRILAPIAFRHALPAYSTEIVLMM 145 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 KST++AS +T+ E+ AQR++S TY+ + ++ A +YL+L +E S+++H Sbjct: 146 KSTALASLVTVWEVTGVAQRLISQTYRTMEVFLCAAIIYLVLNFIILQGMALLEYSLSRH 205 Query: 221 TYSVDK 226 + + Sbjct: 206 RRAAPQ 211 >gi|152971235|ref|YP_001336344.1| histidine and lysine/arginine/ornithine ABC transporter membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206578110|ref|YP_002237302.1| histidine ABC transporter, permease protein HisM [Klebsiella pneumoniae 342] gi|238895826|ref|YP_002920562.1| histidine transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|288934236|ref|YP_003438295.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|290508439|ref|ZP_06547810.1| histidine transport system permease [Klebsiella sp. 1_1_55] gi|329997345|ref|ZP_08302728.1| histidine transport system permease protein HisM [Klebsiella sp. MS 92-3] gi|150956084|gb|ABR78114.1| histidine and lysine/arginine/ornithine transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206567168|gb|ACI08944.1| histidine ABC transporter, permease protein HisM [Klebsiella pneumoniae 342] gi|238548144|dbj|BAH64495.1| histidine transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288888965|gb|ADC57283.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] gi|289777833|gb|EFD85830.1| histidine transport system permease [Klebsiella sp. 1_1_55] gi|328539094|gb|EGF65130.1| histidine transport system permease protein HisM [Klebsiella sp. MS 92-3] Length = 238 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/213 (32%), Positives = 115/213 (53%), Gaps = 11/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S V+ I+ F+A+ R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLISSVVMGGILAVFLAIGRVS-SNKFIQFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTELLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPAGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSSVKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P + A +YLI++ + K E QH Sbjct: 199 PFTAFGIAAVLYLIISYVLISLFRKAEKRWLQH 231 >gi|330875048|gb|EGH09197.1| amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 220 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 105/185 (56%), Gaps = 6/185 (3%) Query: 34 ISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 IS+ IG I ++ F + ++ YV + R TP+LV + +I++ LP +GI D Sbjct: 30 ISIAIGCVIGLMNAFALLSRYRALRMVASIYVTVVRNTPILVLILLIYFALPGLGIRLDK 89 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 + +++L+L AY++E+ R+ ++SI KGQ +A AIGL Q +II+P + Sbjct: 90 LASFVVTLSLYAGAYLTEVFRAGLLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLP 149 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 LS+ FIS+ K TS+A+ I +PE+ A++I +Y+ + + +Y++ CY+I Sbjct: 150 ALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYRVIETWLVTTALYVVA---CYVIA 206 Query: 211 IKIES 215 + + + Sbjct: 207 LLLRT 211 >gi|257125933|ref|YP_003164047.1| polar amino acid ABC transporter inner membrane protein [Leptotrichia buccalis C-1013-b] gi|257049872|gb|ACV39056.1| polar amino acid ABC transporter, inner membrane subunit [Leptotrichia buccalis C-1013-b] Length = 218 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/159 (34%), Positives = 91/159 (57%), Gaps = 11/159 (6%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG-----IVFDSFVAIIISLTLNFSA 104 + II I+ Y W+FRGTPL++QL V++YG+P + IV + A I+ +N++A Sbjct: 43 KNKIIKFIISVYTWVFRGTPLMLQLMVVYYGIPLMNFGGYKIVLAPYTAATITFIINYAA 102 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 Y+ EI+RS I SI KGQ + + +G + Q I ++ILPQ I L +E I+++K TS Sbjct: 103 YLVEIMRSGIESIDKGQHEVAKVLGYSYWQKIIYVILPQAIRRVLPTLGNEAITLIKDTS 162 Query: 165 VASTITIPEIFQTAQRIVSTTYQ------PLIIYCELAF 197 + + + E+ + + + + Y +IIY L+F Sbjct: 163 LVYVLAVTEVMKRTKELANIYYNVTPYICAIIIYLVLSF 201 >gi|52425742|ref|YP_088879.1| ArtM protein [Mannheimia succiniciproducens MBEL55E] gi|52307794|gb|AAU38294.1| ArtM protein [Mannheimia succiniciproducens MBEL55E] Length = 223 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 103/177 (58%), Gaps = 2/177 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 ++ P+ + A I+ TL ++ + + S+IIG AV+ + + + I+ Y+ + R TPL Sbjct: 12 NALPRFVDATIL-TLELSFWAILFSVIIGVICAVV-MSYRVRGLQTIVKAYIELSRNTPL 69 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L+Q+F +++GL IG+ + F +I L +Y++E +R+ I S+ KGQ +++ +IGL Sbjct: 70 LIQIFFLYFGLSKIGVKLEGFTCAVIGLAFLGGSYMAEAVRAGIESVSKGQVESALSIGL 129 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 T QT R+++ PQ + + + + ++K TSV S I I E+ A+ I+ Y+ Sbjct: 130 TPMQTFRYVVFPQAFAVATPAIGANCLFLMKETSVVSAIAIAELMFMAKEIIGMDYK 186 >gi|322418598|ref|YP_004197821.1| polar amino acid ABC transporter inner membrane subunit [Geobacter sp. M18] gi|320124985|gb|ADW12545.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter sp. M18] Length = 234 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 65/212 (30%), Positives = 123/212 (58%), Gaps = 14/212 (6%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++W + + + L + + +TL ++ + V + I+G IAV+++ + I Y+ Sbjct: 6 FDWSIVTSGKYFEWLVSGVKITLELSAVGIVGAFILGLLIAVLKMSHFRPL-RWIASAYL 64 Query: 63 WIFRGTPLLVQLFVIFYG----LPHIGIVFD-------SFVAIIISLTLNFSAYISEIIR 111 FR TPLL+Q+F ++G LP + V D F A I+LT+ SA+I+E IR Sbjct: 65 EFFRNTPLLIQIFFWYFGSYKILPTV--VNDWLNSTNFEFAAAAIALTIYTSAFIAEDIR 122 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S I+SIPK Q +A+ + G + +++++IILPQ + + PL ++F+++ K++S+A TI + Sbjct: 123 SGILSIPKEQMEAARSAGFSYLRSMQYIILPQAVRITVPPLVNQFLNLTKNSSLAMTIGV 182 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+ A+++ S +++ + VYL+L+ Sbjct: 183 MELTYQARQVESYSFKGFEAFTAATVVYLVLS 214 >gi|237799097|ref|ZP_04587558.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021951|gb|EGI02008.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 232 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 114/207 (55%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N+I ++ P L + ++ TL + IS L+ + ++R+ + ++L Y ++ Sbjct: 5 YNMIWENLP-LYFDGLLTTLKLLAISLGFGLLAALPLGLMRVS-KNPWVNLPAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +SF+ ++ +N SAY +EII S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFDAVRESFLWPWLSSATFCACLAFAINTSAYTAEIIAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G+++ + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + Y P Y YL LT Sbjct: 183 AARTVNAQFYLPFEAYITAGVFYLCLT 209 >gi|87309628|ref|ZP_01091762.1| putative inner membrane component of binding-protein-dependent transport system [Blastopirellula marina DSM 3645] gi|87287392|gb|EAQ79292.1| putative inner membrane component of binding-protein-dependent transport system [Blastopirellula marina DSM 3645] Length = 211 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/190 (33%), Positives = 106/190 (55%), Gaps = 6/190 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L+ I++TL ++ V SL+ G D I+ YV FRG +V L Sbjct: 3 QGLWVTILITLGGIAVALVSSLLAGLGRDS-----RDPIVRWTATIYVETFRGASAIVLL 57 Query: 75 FVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 + ++ +P IG+ + VA I+ L LN AY +E++R++I S+P GQ A+ A+ LT Sbjct: 58 YWFYFAMPGLIGVSMPAMVAGIVILGLNIGAYGAEVVRAAIHSVPVGQRIAAQALNLTPW 117 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 QT+R+I+LPQ + PL + I +LKST++ S IT+ ++ Q + + T++ L I+ Sbjct: 118 QTMRYIVLPQAALAATPPLGNLMIELLKSTALVSMITVVDLTQMGMFLRTETHRSLAIFS 177 Query: 194 ELAFVYLILT 203 L +Y +L+ Sbjct: 178 MLLLIYFVLS 187 >gi|323498049|ref|ZP_08103056.1| ABC transporter permease [Vibrio sinaloensis DSM 21326] gi|323316897|gb|EGA69901.1| ABC transporter permease [Vibrio sinaloensis DSM 21326] Length = 225 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 111/203 (54%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LI +SFP L + T+ + ++ +I L++ + V R + I+ F ++ F Sbjct: 3 FSLIFESFPVYL-EGLWTTVWLVSLALIIGLLVAVPLGVARNSQNYFIMGPSWAF-IYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G++ T R IILP + + S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMSNFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIVDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFESFLTAGLFYMALT 203 >gi|167625395|ref|YP_001675689.1| polar amino acid ABC transporter inner membrane subunit [Shewanella halifaxensis HAW-EB4] gi|167355417|gb|ABZ78030.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella halifaxensis HAW-EB4] Length = 226 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/162 (36%), Positives = 94/162 (58%), Gaps = 1/162 (0%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 +FYV + RGTP++VQL VI Y + + D A +I+ LN AYISEIIR+ I ++ Sbjct: 65 NFYVSVIRGTPVVVQL-VILYFIVLAALDVDKITAAVIAFGLNSGAYISEIIRAGIQAVD 123 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A+ ++GL++ T++ +ILPQ I L +EFI +LK T+V I ++ + Sbjct: 124 KGQMEAARSLGLSQAATMKEVILPQAIKNILPSLGNEFIVLLKETAVIGFIGGVDLMRAG 183 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + I S T++ + A +YL+LT I + E+ + Q Sbjct: 184 EIIRSRTFEDSVPLFTCALIYLLLTYIFTFILSRFETRLKQS 225 >gi|325955845|ref|YP_004286455.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus acidophilus 30SC] gi|325332410|gb|ADZ06318.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus acidophilus 30SC] gi|327182680|gb|AEA31127.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus amylovorus GRL 1118] Length = 494 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 109/183 (59%), Gaps = 7/183 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I S +I +++G +A++R+ + ++ I Y+ RGTP +VQ+ +++G+ Sbjct: 298 TIVITVFSVLIGIVLGMLLALMRLS-RNKLLHWIAVCYIEFIRGTPQMVQILFVYFGVGA 356 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + + VA II++ LN AY++E IRS I S+ KGQ +A+ ++GL++ + R++I+PQ Sbjct: 357 LISNLSAVVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLGLSQAKAYRYVIIPQ 416 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCELAFVYL 200 + L +EFI++LK +S+ S I + E+ + I ++TY+ PL I +Y Sbjct: 417 ALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGVLPLFIAM---IIYF 473 Query: 201 ILT 203 I+T Sbjct: 474 IMT 476 >gi|305432078|ref|ZP_07401245.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter coli JV20] gi|304445162|gb|EFM37808.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter coli JV20] Length = 272 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/172 (36%), Positives = 103/172 (59%), Gaps = 3/172 (1%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF 91 +LI F+ +I FFS + I ++ F YV + RGTPLLVQ+ ++FY + + D + Sbjct: 85 ALICSIFLGIIICFFSLSKIIILRFFATLYVELIRGTPLLVQVLLVFYIIANSLGFDDRY 144 Query: 92 VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP 151 + I L++ +AY+SEI R+ I+S+P Q +++ A+GL+ +Q +II PQ I P Sbjct: 145 IVGIFILSMFSAAYLSEIFRAGILSVPIIQIESARALGLSERQIFLYIIFPQAIKNILAP 204 Query: 152 LSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +S + +++K +S+ S I + E+ Q+ Q + S + L Y LAF YLILT Sbjct: 205 ISGQLANLIKDSSLLSVIALNELTQSIQEVNSYIFATLEGYIVLAFAYLILT 256 >gi|299822330|ref|ZP_07054216.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] gi|299815859|gb|EFI83097.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] Length = 496 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/220 (33%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K +F + +S+P LL A + T+ + +S +I+LIIG +++ + I+ I Y Sbjct: 279 KSGFFASLGESWPALL-AGLWYTIRLTVLSLLIALIIGVVFGFMKVS-QNRIVRGIATVY 336 Query: 62 VWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V IFRGTPLLVQ F I++G+P + +F+A +++L+LN AY+ EI+R I S+ G Sbjct: 337 VDIFRGTPLLVQAFFIYFGIPQALDFRMPAFLAALLALSLNAGAYMVEIVRGGIQSVDSG 396 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++GL ++++ I+LPQ I T ++F+ LK TS+ S I + E+ Q+ + Sbjct: 397 QMEAARSLGLPYRKSMIKIVLPQAIRTMIPSFINQFVITLKDTSIMSVIGLVELTQSGKI 456 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I++ T+Q I+ +A +YLI+ + + ++E + Sbjct: 457 IIARTFQSFDIWLIVALMYLIVITILTKVSDRVERRLRND 496 >gi|77461681|ref|YP_351188.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77385684|gb|ABA77197.1| amino acid ABC transporter membrane protein 1, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 226 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 1/203 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y++ L + LL + TL + I + + +G A++R + + S I Sbjct: 1 MAYQFDFLPVVENTDLLLRGALFTLELTAIGALFGVGVGIVGALVRAW-NIRPFSTIFGV 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TP LVQLF IF+GLP +G+ + A ++++ +N AY +EIIR+ I +IP+G Sbjct: 60 YVELIRNTPFLVQLFFIFFGLPSLGVQISEWQAAVLAMVINLGAYSTEIIRAGIQAIPRG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+ ++R + RH++L + LSS+ I ++ ++V S I E+ A Sbjct: 120 QLEAAAALAMSRFEAFRHVVLLPALGKVWPALSSQIIIVMLGSAVCSQIATEELSFAANF 179 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I S ++ Y +YL + Sbjct: 180 IQSRNFRAFETYALTTLIYLCMA 202 >gi|15600268|ref|NP_253762.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|107104174|ref|ZP_01368092.1| hypothetical protein PaerPA_01005247 [Pseudomonas aeruginosa PACS2] gi|116053222|ref|YP_793544.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|218894174|ref|YP_002443043.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254238218|ref|ZP_04931541.1| hypothetical protein PACG_04344 [Pseudomonas aeruginosa C3719] gi|254244043|ref|ZP_04937365.1| hypothetical protein PA2G_04877 [Pseudomonas aeruginosa 2192] gi|296391925|ref|ZP_06881400.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1] gi|9951368|gb|AAG08460.1|AE004920_10 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|115588443|gb|ABJ14458.1| putative amino acid ABC transporter, permease protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126170149|gb|EAZ55660.1| hypothetical protein PACG_04344 [Pseudomonas aeruginosa C3719] gi|126197421|gb|EAZ61484.1| hypothetical protein PA2G_04877 [Pseudomonas aeruginosa 2192] gi|218774402|emb|CAW30219.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 320 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 103/175 (58%), Gaps = 6/175 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + TL ++ +S I L IG + R+ + T+ L YV + RGTPLLVQ+F+ ++ Sbjct: 121 GLWTTLWLSLVSGAIGLAIGLVAGLCRLSKNPTLHDLST-IYVELVRGTPLLVQIFIFYF 179 Query: 80 GLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 IG V + A + +L L AY++EIIR+ + SI +GQ +A+ ++GL Q++R Sbjct: 180 ---FIGTVLNLSREFAGVAALALFTGAYVAEIIRAGVQSIARGQNEAARSLGLNAGQSMR 236 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 ++ILPQ PL+ +FIS++K TS+ S I I E+ ++ + ++T++ I+ Sbjct: 237 YVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIW 291 >gi|300715447|ref|YP_003740250.1| amino acid ABC transporter permease [Erwinia billingiae Eb661] gi|299061283|emb|CAX58392.1| amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 218 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 96/175 (54%), Gaps = 18/175 (10%) Query: 48 FFSDTIISL---------------IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV 92 FF T+++L ++ Y+ +F+GTPLL+QLF+ F+G+ GI + Sbjct: 28 FFGGTVVALPLVMVRLTRRRWPNRLIRGYIELFQGTPLLMQLFLAFFGVALFGIDVSPWT 87 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 A ++LT SA++ +I SI+++PKGQW+AS +GL QT+ ++LPQ + P Sbjct: 88 AASLALTFYTSAFLVDIWHGSILALPKGQWEASRCLGLNFGQTLFRVVLPQALRIGIAPT 147 Query: 153 SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + ++K T++AS I E+ + + + TYQP ++ +A Y ++ CY Sbjct: 148 VGFAVQVIKGTALASIIGFIELTKAGTILNNVTYQPFKVFGLVALGYFLM---CY 199 >gi|283455706|ref|YP_003360270.1| ABC transporter permease [Bifidobacterium dentium Bd1] gi|283102340|gb|ADB09446.1| Permease protein of ABC transporter system [Bifidobacterium dentium Bd1] Length = 443 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/187 (30%), Positives = 108/187 (57%), Gaps = 3/187 (1%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K + L S P L+ + TL I ISF I+L++G ++R+ + + S + Y Sbjct: 227 KVGFLGLAKQSLPALMIG-LKNTLFITVISFAIALLLGVAFGLMRVG-ENRVASGVSKVY 284 Query: 62 VWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V IFRGTP+LV F ++G+P IG + ++A ++L+LN AY++EI+R +I ++ G Sbjct: 285 VAIFRGTPILVWAFFFYFGVPQLIGHSVNIWIAGALTLSLNSGAYLAEIVRGAIQAVDPG 344 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q + + ++GL R+Q++ +ILPQ + + ++ + ++K +S+ I E+ AQ+ Sbjct: 345 QMEGARSLGLNRRQSMARVILPQASKIAMPSVINQLVIMIKDSSLLLAIGFGELLYQAQQ 404 Query: 181 IVSTTYQ 187 + + ++ Sbjct: 405 LYAANFR 411 >gi|49083678|gb|AAT51101.1| PA5075 [synthetic construct] Length = 321 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 103/175 (58%), Gaps = 6/175 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + TL ++ +S I L IG + R+ + T+ L YV + RGTPLLVQ+F+ ++ Sbjct: 121 GLWTTLWLSLVSGAIGLAIGLVAGLCRLSKNPTLHDLST-IYVELVRGTPLLVQIFIFYF 179 Query: 80 GLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 IG V + A + +L L AY++EIIR+ + SI +GQ +A+ ++GL Q++R Sbjct: 180 ---FIGTVLNLSREFAGVAALALFTGAYVAEIIRAGVQSIARGQNEAARSLGLNAGQSMR 236 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 ++ILPQ PL+ +FIS++K TS+ S I I E+ ++ + ++T++ I+ Sbjct: 237 YVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIW 291 >gi|54309893|ref|YP_130913.1| putative ABC-type arginine/histidine transport system, permease component [Photobacterium profundum SS9] gi|46914332|emb|CAG21111.1| putative ABC-type arginine/histidine transport system, permease component [Photobacterium profundum SS9] Length = 225 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/221 (31%), Positives = 120/221 (54%), Gaps = 9/221 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+++ +S+ +L + T+ + ++ VI LII + + R + +I Y++ F Sbjct: 3 FSILFESW-ELYLDGFITTVWMVAVALVIGLIIAIPVGIARNS-KNPMIYFPAWAYIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHI----GIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLL+QL++++YGL + G V+ D++ + LN +AY SEIIR +I S+PKG Sbjct: 61 RGTPLLIQLYLVYYGLSQLIEVQGTVWQDAWFCALFVFILNTAAYTSEIIRGAINSLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G++ R IILP + + S+E I ++ ++VA +TI ++ A+ Sbjct: 121 EIEAAKAYGMSTPLAFRRIILPSAMRRALPAYSNEVIFMVHGSAVAGIVTIVDLTGAARI 180 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQI-KIESSVTQH 220 + S Y P Y Y++LT F I K+E QH Sbjct: 181 VNSRYYAPFESYLFAGMCYMVLT-FTIIWGFKKLEQHWLQH 220 >gi|116254799|ref|YP_770635.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259447|emb|CAK10585.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 228 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/174 (34%), Positives = 100/174 (57%), Gaps = 3/174 (1%) Query: 33 VISLIIGFFIAVI---RIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+S++IGF IA++ + +++L ++ FRG PLLVQL +I+ LP IGI Sbjct: 36 VVSILIGFAIAIVVSAMLLSRQRLLALQARIFISFFRGVPLLVQLLLIYNLLPAIGINVP 95 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 S VA II L+L +AY +E +R S+P G +++ +G+T Q R I P + + Sbjct: 96 SIVAAIIGLSLCTAAYQAENLRGGFSSVPAGLVESAEMVGMTPVQIFRRIKAPIALRLTF 155 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +E I ILK++S+ S + + E+ + AQ + +T+ PL I+ +YL++ Sbjct: 156 PALVNEAILILKASSLVSVVGVIELTRMAQDLAGSTFLPLEIFASAGLIYLVIN 209 >gi|253575107|ref|ZP_04852446.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251845563|gb|EES73572.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 236 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 119/219 (54%), Gaps = 15/219 (6%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 +F QLL +AI TL I +S + +IG A+ R++ ++ I YV RGTP+L Sbjct: 11 AFVQLL-SAIPTTLMITAVSVSVGFVIGVITALFRLY-RVPVLGQISTAYVTFIRGTPML 68 Query: 72 VQLFVIFYGLPHI--------GIVFDS----FVAII-ISLTLNFSAYISEIIRSSIISIP 118 L +I++GLP I G F S +A IS ++ AY+SE++RS ++++ Sbjct: 69 THLLLIYFGLPVIIDGLSEGFGWGFKSASIPMIAFAYISFSITAGAYMSEVVRSGLLAVN 128 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+Y+IG+T Q +R I+ PQ + S LS+ I +L +++A T+++ +I A Sbjct: 129 RGQLEAAYSIGMTTFQALRRIVFPQALAFSLPNLSNSAIGMLHGSTLAFTVSVVDINAKA 188 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 Q + ST ++ Y A ++ LT + ++E + Sbjct: 189 QIVASTNWKFFEAYVAAALIFWGLTVLIERLTARLEKRI 227 >gi|152999485|ref|YP_001365166.1| polar amino acid ABC transporter inner membrane subunit [Shewanella baltica OS185] gi|160874105|ref|YP_001553421.1| polar amino acid ABC transporter inner membrane subunit [Shewanella baltica OS195] gi|151364103|gb|ABS07103.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella baltica OS185] gi|160859627|gb|ABX48161.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella baltica OS195] gi|315266337|gb|ADT93190.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella baltica OS678] Length = 226 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/163 (38%), Positives = 95/163 (58%), Gaps = 3/163 (1%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 + YV + RGTP++VQL VI Y + + D A II+ LN AYISEIIR+ I ++ Sbjct: 65 NLYVGVIRGTPVVVQL-VILYFIVLSALDVDKITAAIIAFGLNSGAYISEIIRAGIQAVD 123 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A+ ++GL++ T++ IILPQ I L +EFI +LK T+V I ++ + Sbjct: 124 KGQTEAARSLGLSQAMTMKSIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAG 183 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQH 220 + I S T++ + A +YL LT SF +++ K E + Q Sbjct: 184 EIIRSRTFEDSVPLFTCALIYLFLTYSFTFVLS-KFEKRLKQS 225 >gi|120597747|ref|YP_962321.1| polar amino acid ABC transporter inner membrane subunit [Shewanella sp. W3-18-1] gi|120557840|gb|ABM23767.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella sp. W3-18-1] gi|319427459|gb|ADV55533.1| ABC arginine transporter, inner membrane subunit, ArtQ [Shewanella putrefaciens 200] Length = 226 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/163 (38%), Positives = 95/163 (58%), Gaps = 3/163 (1%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 + YV + RGTP++VQL VI Y + + D A II+ LN AYISEIIR+ I ++ Sbjct: 65 NLYVGVIRGTPVVVQL-VILYFIVLSALDVDKITAAIIAFGLNSGAYISEIIRAGIQAVD 123 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A+ ++GL++ T++ IILPQ I L +EFI +LK T+V I ++ + Sbjct: 124 KGQTEAARSLGLSQAMTMKSIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAG 183 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQH 220 + I S T++ + A +YL LT SF +++ K E + Q Sbjct: 184 EIIRSRTFEDSVPLFTCALIYLFLTYSFTFVLS-KFEKRLKQS 225 >gi|218678907|ref|ZP_03526804.1| amino acid ABC transporter permease [Rhizobium etli CIAT 894] Length = 276 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/217 (30%), Positives = 121/217 (55%), Gaps = 13/217 (5%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P+ L+ + VTL + IS V ++ +A+ R+ S +++ + + Y++ FRGTPLL Q Sbjct: 60 PRYLHG-LGVTLSLVVISVVCGALLSLPLAMARLS-SSRVLNWLAYGYIYFFRGTPLLAQ 117 Query: 74 LFVIFYGL----PH---IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 LF+++YGL P +GI + D++ + ++T+N +AY +EI+R +I S+P GQ + Sbjct: 118 LFLVYYGLGIFRPQLEAVGIWWFFRDAWYCGLFAMTINTAAYQAEILRGAIQSVPHGQRE 177 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+G+ + R IILPQ + + P +E I ++K ++V + IT+ ++ + S Sbjct: 178 AAAALGIHKFIAFRKIILPQALIVALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFS 237 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T+ Y A YL + + IE +T+H Sbjct: 238 RTFD-YQTYLWAAIFYLSIVEALRHLWAWIERRLTRH 273 >gi|213967001|ref|ZP_03395151.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301385185|ref|ZP_07233603.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302062753|ref|ZP_07254294.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302130126|ref|ZP_07256116.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928323|gb|EEB61868.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 220 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 106/185 (57%), Gaps = 6/185 (3%) Query: 34 ISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 IS+ IG I ++ F + ++ YV + R TP+LV + +I++ LP +GI D Sbjct: 30 ISIAIGCVIGLMNAFALLSRYRALRIVASIYVTVVRNTPILVLILLIYFALPGLGIRLDK 89 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 + +++L+L AY++E+ R+ ++SI KGQ +A AIGL+ Q +II+P + Sbjct: 90 LASFVVTLSLYAGAYLTEVFRAGLLSIHKGQREAGLAIGLSEWQVRAYIIVPVMLRNVLP 149 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 LS+ FIS+ K TS+A+ I +PE+ A++I +Y+ + + +Y++ CY+I Sbjct: 150 ALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYRVIETWLVTTALYVVA---CYVIA 206 Query: 211 IKIES 215 + + + Sbjct: 207 MLLRT 211 >gi|238897603|ref|YP_002923282.1| high-affinity glutamine transport protein (ABC superfamily, membrane) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465360|gb|ACQ67134.1| high-affinity glutamine transport protein (ABC superfamily, membrane) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 218 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 120/207 (57%), Gaps = 10/207 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAA---IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI 57 M++EW ++I + P LL A + +++ +I +I GF A + I S + Sbjct: 1 MQFEW-SVIWPAMPILLQGAKLTLWISILGLLGGLIIGVIAGFTRA-----YGGKISSNV 54 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ + RGTP++VQ+ I++ LP + I D F A ++++ +N AYI+EI R +++S Sbjct: 55 ALIFIELIRGTPIVVQVMFIYFALPMMVPIRIDPFTAAVVTIMINSGAYIAEITRGAVLS 114 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I KG +A A+GL+R+ T+R+++ P + PL +++I +K TS+ I + E+ + Sbjct: 115 IHKGFREAGLALGLSRRDTLRYVVAPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTR 174 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 Q I++ ++ + I+ +A +YLI+T Sbjct: 175 QGQEIIAGNFRAMEIWSAVAVMYLIIT 201 >gi|308235208|ref|ZP_07665945.1| ABC transporter, permease protein [Gardnerella vaginalis ATCC 14018] gi|311114810|ref|YP_003986031.1| ABC transporter system, permease [Gardnerella vaginalis ATCC 14019] gi|310946304|gb|ADP39008.1| ABC superfamily ATP binding cassette transporter system, permease protein [Gardnerella vaginalis ATCC 14019] Length = 330 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/246 (27%), Positives = 126/246 (51%), Gaps = 25/246 (10%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++EW + I + I TL + +S +I++++ +A++R + ++ + F+ Sbjct: 49 RFEWNVVGIYLISDNVLTGIAWTLILTFLSMIIAIVLAIGLAMMRKSV-NPVLRAVSWFF 107 Query: 62 VWIFRGTPLLVQLFVIFYGL-----PHI----------------GIVFDSFVAIIISLTL 100 +W FRGTP+ QL +F+G+ P + +V S A +I L+L Sbjct: 108 IWFFRGTPVYTQL--VFWGMFAVLVPKLSMGIPFTSVEFFSIDSNVVMTSLNAAVIGLSL 165 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N +AY+SEI+R+ + ++ GQ +A+ A+G+ R T+R ++LPQ + PL +E I +L Sbjct: 166 NEAAYLSEIVRAGLEAVDAGQVEAAQALGMGRSLTMRRVVLPQAMRIIVPPLGNETIGML 225 Query: 161 KSTSVASTITIPEIFQTAQRIVSTT-YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 K+TS+ + Q A V+ Y+P+ + + YLI+TS + Q+ +E + Sbjct: 226 KTTSLVLAVPFTLELQFATNAVANRIYKPIPLLIVASIWYLIITSILMVFQVMLEKHFGK 285 Query: 220 HTYSVD 225 + D Sbjct: 286 GFEAKD 291 >gi|259909372|ref|YP_002649728.1| Putative amino acid ABC transporter, permease protein [Erwinia pyrifoliae Ep1/96] gi|224964994|emb|CAX56522.1| Putative amino acid ABC transporter, permease protein [Erwinia pyrifoliae Ep1/96] Length = 218 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 96/175 (54%), Gaps = 18/175 (10%) Query: 48 FFSDTIISL---------------IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV 92 FF T+++L I+ YV +F+GTPLL+QLF+ F+G+ GI + Sbjct: 28 FFGGTLVALPLVRLRLAGRLWPNRIIRAYVELFQGTPLLMQLFLAFFGVALFGIDLSPWA 87 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 A ++LT SA++ +I SI ++PKGQW+A +GL+ QT+ ++LPQ + + P Sbjct: 88 AAALALTCYTSAFLVDIWYGSIKALPKGQWEACRCLGLSSGQTLFRVVLPQALRVAIAPT 147 Query: 153 SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + ++K T++AS I E+ + + + TYQP ++ +A Y ++ CY Sbjct: 148 VGFAVQVVKGTALASIIGFIELTKAGTILNNVTYQPFKVFGLVALGYFLM---CY 199 >gi|13473618|ref|NP_105186.1| amino acid ABC transporter, permease protein [Mesorhizobium loti MAFF303099] gi|14024368|dbj|BAB50972.1| amino acid ABC transporter, permease protein [Mesorhizobium loti MAFF303099] Length = 269 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 114/206 (55%), Gaps = 23/206 (11%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF-VIF 78 I +T+ + ++F ++ IIG +A++ + S + I FYV I RG P+LV LF + F Sbjct: 45 GIGITVFVTVVAFAMASIIGLGVALMGLSGSPWL-RQIARFYVEIIRGVPILVLLFWIAF 103 Query: 79 YGLPHIGIVFDSFVA---------------------IIISLTLNFSAYISEIIRSSIISI 117 G P +++ A I++LT+ +SA+ISE+ R+ I ++ Sbjct: 104 AGAPAFVAAWNALTAPLQSAGYLGELLVRDVSLLWRAIMALTIGYSAFISEVFRAGIQAV 163 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ +A+ A+GL+R Q R I+ PQ I T PL ++F++++K +S+ S + + +I Q Sbjct: 164 EKGQIEAAKALGLSRTQRFRLIVFPQAIRTILPPLGNDFVALVKDSSLVSVLGVADITQM 223 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 + + +++ Y +A++YLILT Sbjct: 224 GKIYAAGSFRFFETYSIVAYIYLILT 249 >gi|73537533|ref|YP_297900.1| glutamine ABC transporter permease protein [Ralstonia eutropha JMP134] gi|72120870|gb|AAZ63056.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134] Length = 218 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 115/205 (56%), Gaps = 8/205 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++ F++I D+ P LL A +T+ I V ++G ++R + + + I Sbjct: 1 MEFD-FSVITDALPALLQGA-RLTVAITLAGLVGGTLVGLLFGLMRAY-GNAWVQNIAFT 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 YV + RGTP++VQ+ I++ LP H+ + D+ A + S+ +N AYI+EI+R + +S+ Sbjct: 58 YVELVRGTPIVVQVMFIYFALPVLLHVRV--DAMTAAVASIIVNSGAYIAEIVRGAFLSV 115 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P+G +A A+GL + + ++ P + PL ++FI LK TS+ I + E+ + Sbjct: 116 PRGLREAGLALGLPPWRVLAFVVGPVALRRMTPPLGNQFIVSLKDTSLFIVIGVGELTRQ 175 Query: 178 AQRIVSTTYQPLIIYCELAFVYLIL 202 Q +++ ++ + I+ +A +YL + Sbjct: 176 GQEVMAANFRAVEIWTAVAALYLCM 200 >gi|300718065|ref|YP_003742868.1| octopine ABC transporter permease [Erwinia billingiae Eb661] gi|299063901|emb|CAX61021.1| octopine ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 228 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/158 (35%), Positives = 96/158 (60%), Gaps = 9/158 (5%) Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAY 105 S + YV++FRGTPLL+Q+F+I+YGL +I + SF+ +++L LN +AY Sbjct: 48 SYVARSYVFLFRGTPLLIQIFMIYYGLGNISAIRHSFLWPFLRDPYWCGLLALILNDAAY 107 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 SEI+R I ++P G +A+ G+++ ++ I LP + + S+E IS+ KSTS+ Sbjct: 108 TSEILRGGIRAVPAGAIEAARVCGMSKFTILKRITLPIAVRQALPAYSNEVISMAKSTSL 167 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 STI++ ++ A VS+TY+ L ++ A +YL ++ Sbjct: 168 VSTISLMDVTGIANAEVSSTYRALEVFISAAVIYLAIS 205 >gi|313110114|ref|ZP_07796016.1| putative amino acid ABC transporter, permease protein [Pseudomonas aeruginosa 39016] gi|310882518|gb|EFQ41112.1| putative amino acid ABC transporter, permease protein [Pseudomonas aeruginosa 39016] Length = 320 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 103/175 (58%), Gaps = 6/175 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + TL ++ +S I L IG + R+ + T+ L YV + RGTPLLVQ+F+ ++ Sbjct: 121 GLWTTLWLSLVSGAIGLAIGLVAGLCRLSENPTLHDLST-IYVELVRGTPLLVQIFIFYF 179 Query: 80 GLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 IG V + A + +L L AY++EIIR+ + SI +GQ +A+ ++GL Q++R Sbjct: 180 ---FIGTVLNLSREFAGVAALALFTGAYVAEIIRAGVQSIARGQNEAARSLGLNAGQSMR 236 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 ++ILPQ PL+ +FIS++K TS+ S I I E+ ++ + ++T++ I+ Sbjct: 237 YVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIW 291 >gi|227325924|ref|ZP_03829948.1| glutamine ABC transporter permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 219 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 95/159 (59%), Gaps = 2/159 (1%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ I RGTP++VQ+ I++ LP I + D F A ++++ +N AYI+EI R S++SI Sbjct: 58 FIEIIRGTPIVVQVMFIYFALPMIFTSVRIDPFAAAVVTIMINSGAYIAEITRGSVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 G +A A+GL+R T+RH+I P + PL +++I +K TS+ I + E+ ++ Sbjct: 118 NGFREAGLALGLSRSATLRHVIAPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRSG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 Q I++ ++ L I+ +A +YL +T I ++E + Sbjct: 178 QEIIAGNFRALEIWTAVAIIYLCITLILSFILRRLERRL 216 >gi|259046528|ref|ZP_05736929.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein/permease protein [Granulicatella adiacens ATCC 49175] gi|259036693|gb|EEW37948.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein/permease protein [Granulicatella adiacens ATCC 49175] Length = 259 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/148 (37%), Positives = 91/148 (61%), Gaps = 5/148 (3%) Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 +I++ Y FRGTP++VQ VI+YG + GI D A I +++N AY+SEI+R I Sbjct: 65 VILNCYTEFFRGTPMIVQAMVIYYGTALMFGINLDVTFAAIFIVSINTGAYMSEIVRGGI 124 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ISI +GQ++AS AIG+T QT+R+++ PQ + + +EF+ +K TSV + I++ E+ Sbjct: 125 ISIDQGQFEASQAIGMTHWQTMRYVVFPQVLRNILPAVGNEFVINIKDTSVLNVISVSEL 184 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + + + ++ Y + FV LIL Sbjct: 185 YFATKTVAGQNFR----YFDTFFVTLIL 208 >gi|116670305|ref|YP_831238.1| polar amino acid ABC transporter inner membrane subunit [Arthrobacter sp. FB24] gi|116610414|gb|ABK03138.1| amino acid ABC transporter membrane protein 1, PAAT family [Arthrobacter sp. FB24] Length = 232 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 52/139 (37%), Positives = 84/139 (60%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 ++ +FRGT LLVQ+F +F+ LP GI A +++L LN AY +E++R +I S KG Sbjct: 54 FIEVFRGTSLLVQMFWLFFALPFFGIQLHPLTAAVLALGLNEGAYAAEVVRGAIASRAKG 113 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A+G+ +R II+PQ+I P + + +LK+TS+ S +T+ ++ +AQ Sbjct: 114 QTEACIALGMEPALRLRRIIIPQSIPAMLPPFGNVMVDLLKNTSLVSLVTVADLTFSAQM 173 Query: 181 IVSTTYQPLIIYCELAFVY 199 I STT Q I+ + +Y Sbjct: 174 IRSTTGQTTAIFITILVMY 192 >gi|315605385|ref|ZP_07880428.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315312954|gb|EFU61028.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 225 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/168 (33%), Positives = 102/168 (60%), Gaps = 4/168 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAV-IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + VT+ I+ +S V+SLI+G F+ + +R + + +M Y+ R P LV LFV + Sbjct: 21 GLGVTVGISALSVVLSLILGVFVGLGMRSRWRP--LRWLMQLYLEFVRIMPQLVLLFVAY 78 Query: 79 YGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 +GL + GI D A ++ TL A + +++R ++I+IP+ Q++++YA+GLT +QT+R Sbjct: 79 FGLTRVAGINLDGITASVLVFTLWGGAEMGDLVRGALIAIPRHQYESAYALGLTPRQTMR 138 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +ILPQT+ A P + ++K+TS+ I + E+ + Q+I+ + Sbjct: 139 RVILPQTLRRLAPPAVNLITRMIKTTSLVVLIGVVEVLKVGQQIIDSN 186 >gi|262068033|ref|ZP_06027645.1| amino acid ABC transporter, permease protein [Fusobacterium periodonticum ATCC 33693] gi|291378255|gb|EFE85773.1| amino acid ABC transporter, permease protein [Fusobacterium periodonticum ATCC 33693] Length = 219 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/178 (35%), Positives = 105/178 (58%), Gaps = 10/178 (5%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLIMHFYVWIFRGTP 69 P+ ++A I+ TL I I ++S+++G + + FF II YV + R TP Sbjct: 11 PEFIHAGIL-TLKIGGIGIMLSIVVGILGSWVLYENFKFFKQIIIG-----YVELSRNTP 64 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LLVQLF ++YGLP IGI F + II LT +Y+ E RS++ +I K Q +++ ++G Sbjct: 65 LLVQLFFLYYGLPKIGIKFSPELCGIIGLTFLGGSYMIETFRSALETIDKIQKESALSLG 124 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +T+ QT+R++ILPQ+ S L++ I +LK TSV S I++ ++ + ++ Y+ Sbjct: 125 MTKWQTMRYVILPQSFVISLPGLTANIIFMLKETSVFSAISLIDMMFVTKDLIGLYYK 182 >gi|295400466|ref|ZP_06810444.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] gi|312112429|ref|YP_003990745.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. Y4.1MC1] gi|294977369|gb|EFG52969.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] gi|311217530|gb|ADP76134.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y4.1MC1] Length = 236 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 65/223 (29%), Positives = 120/223 (53%), Gaps = 24/223 (10%) Query: 18 YAAIVVTLPIACISFVISLIIGFFI----AVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 + I+ LP+ + +I L +GFFI A+IR++ +++ I + YV RGTP+++ Sbjct: 12 FKEIIKALPVTMMLTLIPLFVGFFIGLVVALIRVYKVKGLLA-IANGYVSFLRGTPIIMH 70 Query: 74 LFVIFYGLPHIGIVFDSFVA----------------IIISLTLNFSAYISEIIRSSIISI 117 + +I++G P ++ D+ A ++ +L+L+ AY+SE+IRS I+SI Sbjct: 71 VMLIYFGFP---LLIDAVAAKLGISVQTQLIPISTFVLTALSLSAGAYLSEVIRSGILSI 127 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKGQ +A+Y++G+ QT+ IILPQ + S ++ F+ L ++S+A ++ E+ Sbjct: 128 PKGQVEAAYSVGMNTFQTMVRIILPQALAQSIPNFTNIFVGFLHTSSIAFLVSQKELTGA 187 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 A + ST + L Y +Y ++T + +E T + Sbjct: 188 ANIVASTNLKFLEAYIAAGIIYWLVTILVEGLSSLVEKRATSY 230 >gi|282601295|ref|ZP_06257979.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Subdoligranulum variabile DSM 15176] gi|282569527|gb|EFB75062.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Subdoligranulum variabile DSM 15176] Length = 224 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 121/222 (54%), Gaps = 13/222 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD--TIISLIMHFYVWIFR 66 II ++ LL A+ TL +A + I+G ++ + + I+S+I +V R Sbjct: 4 IITTYGGLLLTAMGQTLLLALCGLFFACILGLIFGLLSVVKNRACNIVSII---FVDAIR 60 Query: 67 GTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 G P++V + I++G+P++ G+ + A + L LN AY++EIIR+ I S+ Sbjct: 61 GVPMIVLAYFIYFGIPYLLNTILGFGGVTLTALQAGTVCLALNCGAYMAEIIRAGIESVD 120 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A+ ++GL + + ++LPQ I T + ++FI LK TS+ S I PE+ TA Sbjct: 121 KGQMEAARSLGLPYWRAMVRVVLPQAIRTMIPSIINQFIITLKDTSILSVIGFPELVNTA 180 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + +V+ ++ ++ +A +YLI+ + ++ ++E + + Sbjct: 181 KNVVANSFMSFQVWAIVAVMYLIVITILSVLAKQMERRLNRG 222 >gi|222823696|ref|YP_002575270.1| ABC transporter, His/Glu/Gln/Arg/opine family (permease protein) [Campylobacter lari RM2100] gi|222538918|gb|ACM64019.1| conserved hypothetical protein, ABC transporter, His/Glu/Gln/Arg/opine family (permease protein) [Campylobacter lari RM2100] Length = 215 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 107/197 (54%), Gaps = 2/197 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ +I P + A+ + TL +A S ++G F + +F + ++ I Y+ Sbjct: 3 FDFLIKFSPMFIQASWL-TLKLAIYGVFFSFLVGLFCMGVS-YFKFSFLNTICKIYIEFS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL+QLF ++Y LP GI SF +I L+ +Y++E +R+ + ++ K Q+++ Sbjct: 61 RNTPLLIQLFFLYYALPEFGIHLSSFACAVIGLSFLGGSYMAESLRAGMEAVKKQQYESG 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++GL++ Q R+II+PQ + + +S+ I +LK TSV S I + ++ A+ ++ Sbjct: 121 LSLGLSKWQNFRYIIMPQALGIAMPSISANIIFLLKETSVVSIIALADLVYVAKDLIGLY 180 Query: 186 YQPLIIYCELAFVYLIL 202 Y+ L YLIL Sbjct: 181 YKSNEALFALVLCYLIL 197 >gi|330878513|gb|EGH12662.1| putative ABC transporter ATP-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 506 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 132/232 (56%), Gaps = 17/232 (7%) Query: 1 MKYEW---FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI 57 M ++W F L D+ + A + ++ +++VIS+++GF +A+ + S +I+L Sbjct: 1 MTFDWKYMFGLFSDTE---FWMATWTVIQLSVLTWVISIVLGFILALAKQS-SVPLINLP 56 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRS 112 Y+W+FR PLLV L + Y LP ++ + F A +I++ + +AY++EI R Sbjct: 57 AKAYIWLFRSLPLLV-LLIFVYNLPQAFPATSAVLANPFWAGLIAMVMCETAYVAEIHRG 115 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 ++SI KGQ +A+ A+GL T I++PQ + + L++E+ISI+K +S+ S I++ Sbjct: 116 GLLSIAKGQTEAARALGLRFVGTQWRIVIPQALRVALPSLTNEYISIVKLSSLVSVISLT 175 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVY-LILTSFCYIIQIKIES--SVTQHT 221 EI QR+ S + + +AF Y L++T F ++++ ++E VTQ Sbjct: 176 EILMVGQRLYSQNFLVMETMAAVAFYYVLVVTVFDFLLK-RLERHLDVTQRK 226 >gi|330861365|emb|CBX71600.1| histidine transport system permease protein hisM [Yersinia enterocolitica W22703] Length = 251 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 117/221 (52%), Gaps = 22/221 (9%) Query: 9 IIDSFPQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIF---FSDTIISLIMHFYVW 63 I+++ P LY A + L + F++S++ G +A++ F ++ ++ + Sbjct: 6 IMEAVPTFLYSDGADMTGLAVTAKLFLLSVVPGLLLALVMAVGQAFGPRPLAWLIRSVTY 65 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIV--------------FDSFVAIIISLTLNFSAYISEI 109 FR TPL +QL +I+YGL IV D+ ++L LN SAY++E+ Sbjct: 66 FFRSTPLYLQLMLIYYGLSQFDIVQLGWQDDQPFWLLFRDATFCATLALVLNTSAYVAEL 125 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 + +++ P+ +W A A G+++ Q IR ++LP T+ L++E + +L +TS+AST+ Sbjct: 126 LAGMMVTFPRQEWVAGEAFGMSQWQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTV 185 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS---FCY 207 T+ +I A+ + TY P I + A +YL+ T FC+ Sbjct: 186 TLLDITGVARAFYAATYSPFIPFLMAAALYLLCTFMLIFCF 226 >gi|257866173|ref|ZP_05645826.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257872504|ref|ZP_05652157.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257875808|ref|ZP_05655461.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|325570408|ref|ZP_08146185.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] gi|257800107|gb|EEV29159.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257806668|gb|EEV35490.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257809974|gb|EEV38794.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|325156618|gb|EGC68795.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] Length = 215 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/181 (35%), Positives = 101/181 (55%), Gaps = 3/181 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 T+ + I+ SL+IG +A+ ++ SD +I I YV FR PLL+ + + +P Sbjct: 19 TVMASLIALFFSLLIGTLMAIFQL--SDNRLIKGIAKAYVEFFRNIPLLIIVMFFYVVVP 76 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + FD F A I LT+ SA+I+E IRS I ++PKGQ +AS + G T Q +R+IILP Sbjct: 77 MYWVSFDGFQAGTIGLTIYTSAFIAETIRSGIQTVPKGQMEASLSSGFTYSQAMRYIILP 136 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q PL ++FI+++K++S+ + + +I I S T+ Y + YLI+ Sbjct: 137 QAFKIVVPPLGNQFINLVKNSSILAMVAGLDIMYQGDLIASETFNTFDTYIIVGLFYLII 196 Query: 203 T 203 T Sbjct: 197 T 197 >gi|237801378|ref|ZP_04589839.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806661|ref|ZP_04593365.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024237|gb|EGI04294.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027775|gb|EGI07830.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 216 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 85/143 (59%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ FR TPL+VQL+V+F+ LP GI F + +I L ++AYI+E R +I IP G Sbjct: 58 YLSFFRNTPLMVQLYVLFFALPLAGITFPAITTGVIGLGCYYAAYIAEAYRGAIDDIPAG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A+ R T R +ILPQ + L + I + K T + + ITIPE+FQ A++ Sbjct: 118 QWEAARALDFDRGDTWRRLILPQALKPMLPVLGNYLIGMFKETPLLAVITIPELFQAAKQ 177 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I TY+ Y +A ++L ++ Sbjct: 178 IAGMTYRYNEPYTVMALMFLAIS 200 >gi|209544821|ref|YP_002277050.1| polar amino acid ABC transporter inner membrane subunit [Gluconacetobacter diazotrophicus PAl 5] gi|209532498|gb|ACI52435.1| polar amino acid ABC transporter, inner membrane subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 517 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/198 (34%), Positives = 114/198 (57%), Gaps = 8/198 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL +A +S + +++I +A++ + D ++ + YV +FR P L+QL ++ LP Sbjct: 308 VTLVMAVLSHMTAIVIAIPMALV-LNGRDGLLKSGVRAYVALFRAAPTLLQLLFVWNALP 366 Query: 83 HIGIVFDS-----FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 VF F+A ISL++N +AY EI R+++ +I GQ A A+G+TR Q R Sbjct: 367 QFLPVFREAWFTPFLAAWISLSINEAAYQVEINRAALQAIDPGQALAGDALGMTRMQVYR 426 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 H+I PQ + + P +EFIS++K+TS+AS I++ E+ Q V+ T+ Y A Sbjct: 427 HVIFPQALRIALPPTINEFISLIKTTSLASVISLQELLAVTQINVARTFA-FTEYYAAAL 485 Query: 198 VYLILTSFCYI-IQIKIE 214 VY +L F ++ +Q +IE Sbjct: 486 VYYLLIVFFFLGLQRRIE 503 >gi|302386910|ref|YP_003822732.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium saccharolyticum WM1] gi|302197538|gb|ADL05109.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium saccharolyticum WM1] Length = 219 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 105/187 (56%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +E+ I ++ L A +TL I+ + ++S IG +++RI ++ I++ Sbjct: 1 MDFEF----IRAYTPLYIEAAGMTLRISFLGILLSSAIGLLCSLVRII-KIPVLKSIVNG 55 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLL+QLF +++GLP IG+V S + L +Y++E R+ + +P Sbjct: 56 YIEVSRNTPLLIQLFFLYFGLPKIGVVLSSESCAVTGLAFLGGSYMAEAFRTGMEQVPVI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q ++ ++GLT+ Q RHIILPQ +TTS + I ++K TSV S + + ++ A+ Sbjct: 116 QSESGLSLGLTKGQVFRHIILPQAVTTSVPVFCANIIFLIKETSVFSAVALADLMFVAKD 175 Query: 181 IVSTTYQ 187 ++ Y+ Sbjct: 176 LIGIYYK 182 >gi|257869938|ref|ZP_05649591.1| amino acid ABC transporter [Enterococcus gallinarum EG2] gi|257804102|gb|EEV32924.1| amino acid ABC transporter [Enterococcus gallinarum EG2] Length = 489 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/178 (34%), Positives = 107/178 (60%), Gaps = 3/178 (1%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 +A + + I G +A +++ S I+ I Y+ RGTPLLVQ+F++++G +G+ Sbjct: 296 LAFVGVLFGSIAGSLLAFMKLSAS-KILRWIAIVYIEYVRGTPLLVQIFIVYFGTGVLGL 354 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 A I+L LN +AY++EIIR+ I ++ KGQ +A+ ++G+ + Q +R II PQ I Sbjct: 355 DLSKLTAGCIALALNSAAYVAEIIRAGINAVNKGQLEAARSLGMNQVQAMRFIIFPQAIK 414 Query: 147 TSAVPLSSEFISILKSTSVASTITIPE-IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +EF++++K +SV S I + E IFQT + +++P + Y ++ +Y +LT Sbjct: 415 NILPALGNEFVTVIKESSVVSVIGVSELIFQTG-IVQGASFKPFLPYVIVSLIYFVLT 471 >gi|323339542|ref|ZP_08079817.1| glutamate ABC superfamily ATP binding cassette transporter permease protein [Lactobacillus ruminis ATCC 25644] gi|323093022|gb|EFZ35619.1| glutamate ABC superfamily ATP binding cassette transporter permease protein [Lactobacillus ruminis ATCC 25644] Length = 229 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 114/211 (54%), Gaps = 19/211 (9%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWI 64 F+ + +P L + T+ I+ I I +++G + +R+ SD ++S + YV I Sbjct: 2 FDFLSKYYP-LFFCGTAQTVIISLIGVAIGILLGLIVVSMRM--SDFKVLSWLARCYVSI 58 Query: 65 FRGTPLLVQLFVIFYGL------PHIGIVFDSFVAII---ISLTLNFSAYISEIIRSSII 115 RGTP ++Q+ +I+Y L P + I+ S II I+L +N AY +EI RS II Sbjct: 59 VRGTPAMIQVMLIYYSLSKLLELPDVSILGSSIARIIPGSIALGINSGAYTAEIFRSGII 118 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+PKGQ +A ++GL T+ I+LPQ + L +EFIS++K +SV I + ++ Sbjct: 119 SVPKGQTEAGLSLGLDELTTMTSIVLPQAVRNVLPALCNEFISLIKESSVLFYIGVQDLT 178 Query: 176 QTAQRIVSTTYQ---PLIIYCELAFVYLILT 203 A I T Y PLI+ A +Y ILT Sbjct: 179 AQALGIGGTLYDFVPPLIVA---AIIYFILT 206 >gi|289674516|ref|ZP_06495406.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae FF5] gi|302186817|ref|ZP_07263490.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae 642] gi|330900039|gb|EGH31458.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] gi|330938795|gb|EGH42320.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] Length = 221 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 109/204 (53%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F ++ S LL A+ TL + I ++ + +G AV+R + + I Sbjct: 1 MAYHFDFTPVLQSIDLLLRGALF-TLELTAIGTLLGVSLGIVGAVVRAWKIQPFAT-IFA 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TP LVQLF IF+GLP +G+ + A ++++ +N AY +EI+R+ I +IPK Sbjct: 59 IYVELIRNTPFLVQLFFIFFGLPSLGVQITEWQAAVLAMVINLGAYSTEIVRAGIQAIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +AS A+ ++R + RH++L + LSS+ I ++ +SV S I E+ A Sbjct: 119 GQLEASAALAMSRYEAFRHVVLVPALGKVWPALSSQIIIVMLGSSVCSQIATEELSFYAN 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I S ++ Y +YL + Sbjct: 179 FIQSRNFRSFETYIVTTLIYLAMA 202 >gi|90409071|ref|ZP_01217196.1| histidine transport system permease protein HisM [Psychromonas sp. CNPT3] gi|90309828|gb|EAS37988.1| histidine transport system permease protein HisM [Psychromonas sp. CNPT3] Length = 224 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 102/181 (56%), Gaps = 12/181 (6%) Query: 35 SLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF 91 +LI+G FIA+ + I+ + +H Y++ FRGTPLL+QLF+I+YG + DS+ Sbjct: 27 ALILGLFIAIPAGIICSSQCKILKVPVHLYMYFFRGTPLLIQLFIIYYGSGQFEALRDSW 86 Query: 92 V---------AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + +++LTLN AY +EI+R I+++PKG+ +A+ A G++ ++ I LP Sbjct: 87 LWEYFQEAWFCALLALTLNTGAYTAEIVRGVIVTMPKGELEAAKAYGMSAWLILKRITLP 146 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + + S+E I ++ +++ +TI +I A+ + S Y P Y A +Y+ L Sbjct: 147 NALRRALPVYSNEIIFMIHGSAITGLVTIVDITGAARVVNSRYYAPFEAYLAAAVLYMCL 206 Query: 203 T 203 T Sbjct: 207 T 207 >gi|311694311|gb|ADP97184.1| putative amino acid ABC transporter permease protein [marine bacterium HP15] Length = 221 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 117/205 (57%), Gaps = 3/205 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M YE+ +N++ + PQLL A V TL ++ ++ ++ ++I +A+ ++ + S + Sbjct: 1 MDYEFHWNVVFQNMPQLLNGAFV-TLHVSVLAMLLGVVIAILLAIAKMN-NTKFFSQVAT 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V I R TP L Q+++ ++GL GI +VA++ +L + Y++E R SIP Sbjct: 59 VWVEIARNTPALFQIYMAYFGLGAFGIHLSPYVAVLSALVFINAGYLTETFRGGFQSIPS 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q+ AS ++G+T QT R+IILPQ + P++++F+ + +S+ + + E+ T Q Sbjct: 119 TQYSASKSLGMTSIQTYRYIILPQMLRRIYHPMTNQFVWSILMSSLGILVGMSELSGTTQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTS 204 R+ S +++ L + A +Y ++T Sbjct: 179 RLQSLSFRTLEFFIVAAVMYFVITK 203 >gi|300715979|ref|YP_003740782.1| amino acid ABC transporter permease [Erwinia billingiae Eb661] gi|299061815|emb|CAX58931.1| Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine [Erwinia billingiae Eb661] Length = 290 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 114/212 (53%), Gaps = 22/212 (10%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +V TL ++ ++ + + G +A I + ++ + Y W+FRGTPL++QL + F Sbjct: 73 GVVNTLVMSILAMALGIFFGV-VAAIMYMSPNPVLHYLSVGYAWVFRGTPLILQLLLWFN 131 Query: 80 ---GLPHIGI----------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P I I V FVA ++ L++N AY SE++R+ ++S+ GQ++A+ Sbjct: 132 LALVFPVIAIPGVFSVETVNVMTPFVAALLGLSINQGAYTSEVVRAGLLSVDTGQYEAAK 191 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +IG+ R Q ++ IILPQ + P+ +EFIS++K+TS+AS I E+ Q I Sbjct: 192 SIGMPRLQALQRIILPQAMRVILPPVGNEFISMIKTTSLASMIQYSELLYNTQNIYYANA 251 Query: 187 QPLIIYCELAFV----YLILTSFCYIIQIKIE 214 + + EL FV YLI+ + Q ++E Sbjct: 252 RVM----ELLFVAGIWYLIIVTVLSFGQSRLE 279 >gi|323697764|ref|ZP_08109676.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323457696|gb|EGB13561.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 294 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 65/224 (29%), Positives = 120/224 (53%), Gaps = 35/224 (15%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI---FFSDTIISLIMHFYVWIFRGTPL 70 P LL + T+ ++ S ++++++G + + R+ F + ++ YV + R TP Sbjct: 62 PGLLTQGLFTTIRLSVWSGLLAMVLGVVVGLFRVSPSLFKRQVGAV----YVGLIRNTPP 117 Query: 71 LVQLFVIFYGLPH-----IGI-----------------------VFDSFVAIIISLTLNF 102 LV +FV ++ + +G+ F F++ +I+L L Sbjct: 118 LVLIFVFYFFIGDQIMSLLGVERLIYALSDGAREALSWFFGPMNRFPRFLSALITLALFE 177 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AYI+EI+R+ I S+ GQW+A+ GLTR Q++ H+ILPQ + L+ +FISI+K Sbjct: 178 AAYIAEIVRAGIESVEPGQWEAAAGTGLTRTQSLVHVILPQALQRMLPALAGQFISIIKD 237 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFC 206 +++ S I+I E+ AQ++++TTY+ I+ + +Y +LT C Sbjct: 238 SAIVSVISIEELTFQAQQLMTTTYRSFEIWTLVLVMYFVLTFLC 281 >gi|283954500|ref|ZP_06372019.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 414] gi|283793904|gb|EFC32654.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 414] Length = 225 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/195 (34%), Positives = 112/195 (57%), Gaps = 7/195 (3%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH--FYVWIFRGTP 69 ++ + + + TL I+ S ++S+I+G V F +II L FY+ + RGTP Sbjct: 21 TYKEKFFQGFLNTLMISFFSLLLSIILG---GVFCAFSLSSIIFLRFFSIFYIELIRGTP 77 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSA-YISEIIRSSIISIPKGQWDASYAI 128 LLVQ+ +I+Y + + + FD+ + +++ FSA Y++EI R+ I+SI Q +++ A+ Sbjct: 78 LLVQVLLIYYIIAN-NLGFDNRYVVGVTILACFSAAYLAEIFRAGILSISISQLESARAL 136 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL Q +II PQ + PLS +F +++K +S+ S I + E+ Q AQ + S T+ Sbjct: 137 GLKEIQICTYIIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQNAQEVNSYTFAT 196 Query: 189 LIIYCELAFVYLILT 203 L Y LA YLILT Sbjct: 197 LEAYVVLAIAYLILT 211 >gi|217972161|ref|YP_002356912.1| polar amino acid ABC transporter inner membrane subunit [Shewanella baltica OS223] gi|304411005|ref|ZP_07392621.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella baltica OS183] gi|307301872|ref|ZP_07581630.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella baltica BA175] gi|217497296|gb|ACK45489.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella baltica OS223] gi|304350540|gb|EFM14942.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella baltica OS183] gi|306913910|gb|EFN44331.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella baltica BA175] Length = 226 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/163 (38%), Positives = 95/163 (58%), Gaps = 3/163 (1%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 + YV + RGTP++VQL VI Y + + D A II+ LN AYISEIIR+ I ++ Sbjct: 65 NLYVGVIRGTPVVVQL-VILYFIVLSALDVDKITAAIIAFGLNSGAYISEIIRAGIQAVD 123 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A+ ++GL++ T++ IILPQ I L +EFI +LK T+V I ++ + Sbjct: 124 KGQTEAARSLGLSQAMTMKSIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAG 183 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQH 220 + I S T++ + A +YL LT SF +++ K E + Q Sbjct: 184 EIIRSRTFEDSVPLFTCALIYLFLTYSFTFVLS-KFEKRLKQS 225 >gi|303233085|ref|ZP_07319760.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4] gi|302480860|gb|EFL43945.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4] Length = 564 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/195 (34%), Positives = 102/195 (52%), Gaps = 7/195 (3%) Query: 30 ISFVISLIIGFF--IAVIRIFFSD----TIISLIMHFYVWIFRGTPLLVQLFVIFYGLP- 82 I F+I L+I F + V R S + +I+ Y+ IFRGTP++VQ +IFYG Sbjct: 358 IGFLIGLLIAIFQSLHVARHHRSTYALYKTLDIIIKVYIEIFRGTPMMVQAMLIFYGSKL 417 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 GI + + +++N AY+SE +R I+ + GQ + + A+GL T+ HIILP Sbjct: 418 FFGIDLSPLTSAFLIVSINSGAYLSETVRGGILGVSAGQLEGAKALGLGHWDTMVHIILP 477 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q I + + +E +K TSV + I + E+F + I TTYQ Y + +Y IL Sbjct: 478 QAIVSILPSVGNELNMNIKDTSVLNVIAVSELFFVTKSIAGTTYQTFQTYLITSVIYFIL 537 Query: 203 TSFCYIIQIKIESSV 217 T I+ +IE V Sbjct: 538 TFAASIMLTQIERHV 552 >gi|282861062|ref|ZP_06270127.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] gi|282563720|gb|EFB69257.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] Length = 322 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 102/178 (57%), Gaps = 13/178 (7%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFY--------GLP-----HIGIVFDSFVAIII 96 + + S + Y+W FRGTP+ VQL + F +P + V F+ ++ Sbjct: 109 KNPVTSWVAWLYIWFFRGTPVYVQLLLWFNLALVFPILNIPFVYKDEMTDVMTPFMCALL 168 Query: 97 SLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF 156 L LN +AY++EI R+ I S+ +GQ +AS+A+G+T+ +T+R ++LPQ + P +EF Sbjct: 169 GLGLNEAAYMAEICRAGIQSVDEGQTEASHALGMTQAKTMRRVVLPQALRVIIPPTGNEF 228 Query: 157 ISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I++LK++S+ +T E+ ++ +I ST+Y + + + Y+++TS + Q +E Sbjct: 229 INMLKTSSLVYAVTYNELLRSTSQIGSTSYAVMEMLFVASIWYIVMTSIFSVGQYYLE 286 >gi|162149590|ref|YP_001604051.1| transport protein [Gluconacetobacter diazotrophicus PAl 5] gi|161788167|emb|CAP57772.1| putative transport protein [Gluconacetobacter diazotrophicus PAl 5] Length = 538 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/198 (34%), Positives = 114/198 (57%), Gaps = 8/198 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL +A +S + +++I +A++ + D ++ + YV +FR P L+QL ++ LP Sbjct: 329 VTLVMAVLSHMTAIVIAIPMALV-LNGRDGLLKSGVRAYVALFRAAPTLLQLLFVWNALP 387 Query: 83 HIGIVFDS-----FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 VF F+A ISL++N +AY EI R+++ +I GQ A A+G+TR Q R Sbjct: 388 QFLPVFREAWFTPFLAAWISLSINEAAYQVEINRAALQAIDPGQALAGDALGMTRMQVYR 447 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 H+I PQ + + P +EFIS++K+TS+AS I++ E+ Q V+ T+ Y A Sbjct: 448 HVIFPQALRIALPPTINEFISLIKTTSLASVISLQELLAVTQINVARTFA-FTEYYAAAL 506 Query: 198 VYLILTSFCYI-IQIKIE 214 VY +L F ++ +Q +IE Sbjct: 507 VYYLLIVFFFLGLQRRIE 524 >gi|237667355|ref|ZP_04527339.1| glutamine ABC transporter, permease/substrate-binding protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|237655703|gb|EEP53259.1| glutamine ABC transporter, permease/substrate-binding protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 254 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 12/213 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI---------FFSDTI 53 + W +I + +L TL +A I VI IIGF + ++R F+ T+ Sbjct: 10 FGWVVFLIQKYGELFIKGAAYTLILALIGTVIGCIIGFLVGIVRKIEVQEDCNKFYKYTL 69 Query: 54 I--SLIMHFYVWIFRGTPLLVQLFVIFYG-LPHIGIVFDSFVAIIISLTLNFSAYISEII 110 +I+ YV FRGTP++VQ VI+YG + I F A + +++N AY++E + Sbjct: 70 KLSQIILTGYVEFFRGTPMIVQAMVIYYGAMEAFNIDMAPFTAGLFVVSINTGAYMAETV 129 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R I SI GQ + + AIG+T QT+ ++ILPQT+ + + I +K TSV + I+ Sbjct: 130 RGGIESIDMGQTEGAKAIGMTHFQTMLYVILPQTLRNIMPQIGNNLIINIKDTSVLNVIS 189 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + E++ + Y+ ++ + +Y ++ Sbjct: 190 VSELYFVGKSAAGVYYKYFPVFFIICVIYFVMN 222 >gi|57237748|ref|YP_178996.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni RM1221] gi|86150652|ref|ZP_01068874.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151089|ref|ZP_01069305.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 260.94] gi|86152546|ref|ZP_01070751.1| amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|121612211|ref|YP_001000594.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 81-176] gi|157415177|ref|YP_001482433.1| amino acid ABC transporter permease [Campylobacter jejuni subsp. jejuni 81116] gi|167005525|ref|ZP_02271283.1| putative polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 81-176] gi|205356403|ref|ZP_03223168.1| putative ABC type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni CG8421] gi|218562539|ref|YP_002344318.1| putative ABC-type amino-acid transporter permease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|283956263|ref|ZP_06373743.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 1336] gi|315124413|ref|YP_004066417.1| putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|57166552|gb|AAW35331.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni RM1221] gi|85838913|gb|EAQ56180.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni CF93-6] gi|85842259|gb|EAQ59505.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 260.94] gi|85843431|gb|EAQ60641.1| amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|87248890|gb|EAQ71853.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 81-176] gi|112360245|emb|CAL35040.1| putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|157386141|gb|ABV52456.1| putative polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 81116] gi|205345788|gb|EDZ32426.1| putative ABC type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni CG8421] gi|283791983|gb|EFC30772.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 1336] gi|284926153|gb|ADC28505.1| amino acid ABC transporter permease [Campylobacter jejuni subsp. jejuni IA3902] gi|307747818|gb|ADN91088.1| Amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni M1] gi|315018135|gb|ADT66228.1| putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315058359|gb|ADT72688.1| Putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni S3] gi|315927530|gb|EFV06863.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930760|gb|EFV09765.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni 305] gi|315932599|gb|EFV11530.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni 327] Length = 250 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/193 (32%), Positives = 109/193 (56%), Gaps = 14/193 (7%) Query: 20 AIVVTLPIACISFVISLI---IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 + TL ++ ++ +I+ I IG +A R II YV +F+ PL++Q+F Sbjct: 47 GFIYTLEVSILALLIATIFGTIGGVMATSRF----KIIRAYTRIYVELFQNVPLVIQIFF 102 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +FY LP +GI D F ++ + AY+SE++RS I+++P+GQ++AS + G T Q + Sbjct: 103 LFYALPVLGIRLDIFTIGVLGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQQM 162 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST--TYQPLIIYCE 194 R+II+PQTI P++++ ++++K+TSV + E+ +A + Y P I+ Sbjct: 163 RYIIVPQTIRIILPPMTNQMVNLIKNTSVLLIVGGAELMHSADSYAADYGNYAPAYIFA- 221 Query: 195 LAFVYLILTSFCY 207 A +Y I+ CY Sbjct: 222 -AVLYFII---CY 230 >gi|330960988|gb|EGH61248.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 220 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 105/185 (56%), Gaps = 6/185 (3%) Query: 34 ISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 IS+ IG I ++ F + ++ YV + R TP+LV + +I++ LP +GI D Sbjct: 30 ISIAIGCVIGLMNAFALLSRYRALRIVASIYVTVVRNTPILVLILLIYFALPGLGIRLDK 89 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 + I++L+L AY++E+ R+ ++SI KGQ +A AIGL Q +II+P + Sbjct: 90 LASFIVTLSLYAGAYLTEVFRAGLLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLP 149 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 LS+ FIS+ K TS+A+ I +PE+ A++I +Y+ + + +Y++ CY+I Sbjct: 150 ALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYRVIETWLVTTALYVVA---CYVIA 206 Query: 211 IKIES 215 + + + Sbjct: 207 MLLRA 211 >gi|258404608|ref|YP_003197350.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] gi|257796835|gb|ACV67772.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] Length = 269 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/189 (32%), Positives = 113/189 (59%), Gaps = 6/189 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS-LIMHFYVWIFRGTPLLVQLF 75 L ++VTL I +S ++SL+ F + + +++ L+ Y+ + R TPLL+ +F Sbjct: 66 LLQGLLVTLKITGVSLLLSLV--FGLGAALLRLLPSVMGRLVARIYLELVRNTPLLILIF 123 Query: 76 VIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 I++ + P GI F + +++L+L AY SEI R+ I+SI +GQW+A+Y +GL+ Sbjct: 124 FIYFVIGPLFGI--GRFFSAVLALSLFEGAYASEIFRAGIVSIHRGQWEAAYCLGLSNWD 181 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 R IILPQ + PL+S+ +S++K +++ STI + ++ Q +V+ T+ ++ Sbjct: 182 MYRKIILPQALRRIIPPLTSQAVSLVKDSALVSTIAVYDLTMRGQALVAETFLAFEVWFT 241 Query: 195 LAFVYLILT 203 +A +YL+LT Sbjct: 242 VAGLYLVLT 250 >gi|228989527|ref|ZP_04149512.1| Amino acid ABC transproter, permease [Bacillus pseudomycoides DSM 12442] gi|228995720|ref|ZP_04155383.1| Amino acid ABC transproter, permease [Bacillus mycoides Rock3-17] gi|229003347|ref|ZP_04161177.1| Amino acid ABC transproter, permease [Bacillus mycoides Rock1-4] gi|228757965|gb|EEM07180.1| Amino acid ABC transproter, permease [Bacillus mycoides Rock1-4] gi|228764097|gb|EEM12981.1| Amino acid ABC transproter, permease [Bacillus mycoides Rock3-17] gi|228770252|gb|EEM18831.1| Amino acid ABC transproter, permease [Bacillus pseudomycoides DSM 12442] Length = 230 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 100/163 (61%), Gaps = 2/163 (1%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEI 109 ++ I++ I H Y+ + RGTPL+VQ+ ++++G+ I IV F A I+L ++ AYI+EI Sbjct: 44 NNKILNSIAHIYIAVIRGTPLIVQIMILYFGITSI-IVLSPFWAGAIALAIHNGAYITEI 102 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R SI S+ +GQ +A+ ++G++ +R IILPQ S PL ++F+ LK +S+ + + Sbjct: 103 FRGSIQSVDRGQLEAARSLGMSYPLAMRRIILPQAFRLSIPPLGNQFVIGLKDSSLVAYV 162 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQI 211 + E++ + I + ++ L Y ++ YL+L F Y++ + Sbjct: 163 GMSELWGSGLSIAAGNFKQLETYIVVSAYYLVLVLLFTYLVNL 205 >gi|42779547|ref|NP_976794.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|42735463|gb|AAS39402.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] Length = 290 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 108/187 (57%), Gaps = 3/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + I ++P LL A IV + SLI F A RI ++ +++ I H Y+ I Sbjct: 62 FEIFISTYPTLLKATIVTLQLTLTSLLLGSLIGLLF-AFFRIS-NNKVLNSIAHVYIAII 119 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 120 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAA 178 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 179 RSLGMPYPLAMRRIVLPQAFRQSIPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGN 238 Query: 186 YQPLIIY 192 +Q L Y Sbjct: 239 FQQLDTY 245 >gi|114046424|ref|YP_736974.1| polar amino acid ABC transporter inner membrane subunit [Shewanella sp. MR-7] gi|113887866|gb|ABI41917.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella sp. MR-7] Length = 226 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/163 (38%), Positives = 94/163 (57%), Gaps = 3/163 (1%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV + RGTP++VQL VI Y + + D A II+ LN AYISEIIR+ I ++ Sbjct: 65 ELYVGVIRGTPVVVQL-VILYFIVLAALDVDKITAAIIAFGLNSGAYISEIIRAGIQAVD 123 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A+ ++GL++ T++ IILPQ I L +EFI +LK T+V I ++ + Sbjct: 124 KGQTEAARSLGLSQAMTMKLIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAG 183 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQH 220 + I S T++ I A +YL LT SF +++ K E + Q Sbjct: 184 EIIRSRTFEDSIPLFTCALIYLFLTYSFTFMLS-KFEKRLKQS 225 >gi|227115307|ref|ZP_03828963.1| glutamine ABC transporter permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 219 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 95/159 (59%), Gaps = 2/159 (1%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ I RGTP++VQ+ I++ LP I + D F A ++++ +N AYI+EI R S++SI Sbjct: 58 FIEIIRGTPIVVQVMFIYFALPMIFTSVRIDPFAAAVVTIMINSGAYIAEITRGSVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 G +A A+GL+R T+RH+I P + PL +++I +K TS+ I + E+ ++ Sbjct: 118 NGFREAGLALGLSRSATLRHVIAPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRSG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 Q I++ ++ L I+ +A +YL +T I ++E + Sbjct: 178 QEIIAGNFRALEIWTAVAIIYLCITLVLSFILRRLERRL 216 >gi|212716937|ref|ZP_03325065.1| hypothetical protein BIFCAT_01881 [Bifidobacterium catenulatum DSM 16992] gi|212660222|gb|EEB20797.1| hypothetical protein BIFCAT_01881 [Bifidobacterium catenulatum DSM 16992] Length = 517 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 121/218 (55%), Gaps = 7/218 (3%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K ++ L+ S P LL + TL I +SF I+L++G ++++ + I+ I Y Sbjct: 301 KVGFWGLVKQSMPALL-TGLKNTLLITLLSFAIALVLGVAFGLMKVS-ENKILEGIAKVY 358 Query: 62 VWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + +FRGTP+LV F ++G+P IG + +VA ++L+LN AY++EI+R ++ S+ G Sbjct: 359 IAVFRGTPILVWAFFFYFGVPQLIGHSVNIWVAGALTLSLNSGAYLAEIVRGAVQSVDSG 418 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q + + ++GL Q + +I+PQ + + ++ + ++K +S+ I E+ AQ+ Sbjct: 419 QMEGARSLGLNHHQAMARVIMPQAAAIAMPSIINQLVIMIKDSSLLLAIGFGELLYQAQQ 478 Query: 181 IVSTTY---QPLIIYCELAFVYL-ILTSFCYIIQIKIE 214 + + + + L+I + FV + ILT I+ K+ Sbjct: 479 LYAANFRVTETLLIVGVMYFVAITILTWLANIVDRKVN 516 >gi|184157758|ref|YP_001846097.1| amino acid ABC transporter permease [Acinetobacter baumannii ACICU] gi|183209352|gb|ACC56750.1| ABC-type amino acid transport system, permease component [Acinetobacter baumannii ACICU] Length = 219 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 109/187 (58%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +++ + ++ F ++A + TL I+ IS ++++I+G I I I + +++ I F Sbjct: 1 MNWQYIHSVLPQF----FSATLTTLKISIISIILAIIVGL-ICSILITYHVRVLNRIAQF 55 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLL+QLF ++YGLP +GI D F +I LT +Y++E R+ + S+ KG Sbjct: 56 YIELSRNTPLLIQLFFLYYGLPKLGIKIDGFACGVIGLTFLGGSYMAEAFRAGLQSVAKG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q D++ +IGL Q R++I PQ + S + + + ++K +SV S I + E+ + Sbjct: 116 QIDSAKSIGLKPTQIFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKD 175 Query: 181 IVSTTYQ 187 ++ Y+ Sbjct: 176 LIGMDYK 182 >gi|50121693|ref|YP_050860.1| glutamine ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49612219|emb|CAG75669.1| glutamine transport system permease protein [Pectobacterium atrosepticum SCRI1043] Length = 219 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 95/159 (59%), Gaps = 2/159 (1%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ I RGTP++VQ+ I++ LP I + D F A ++++ +N AYI+EI R S++SI Sbjct: 58 FIEIIRGTPIVVQVMFIYFALPMIFTSVRIDPFAAAVVTIMINSGAYIAEITRGSVLSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 G +A A+GL+R T+RH+I P + PL +++I +K TS+ I + E+ ++ Sbjct: 118 NGFREAGLALGLSRSATLRHVIAPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRSG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 Q I++ ++ L I+ +A +YL +T I ++E + Sbjct: 178 QEIIAGNFRALEIWTAVAIIYLCITLVLSFILRRLERRL 216 >gi|304413343|ref|ZP_07394816.1| permease component of ABC-type amino acid transport system [Candidatus Regiella insecticola LSR1] gi|304284186|gb|EFL92579.1| permease component of ABC-type amino acid transport system [Candidatus Regiella insecticola LSR1] Length = 218 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 101/171 (59%), Gaps = 1/171 (0%) Query: 49 FSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYIS 107 + I S I ++ + RGTP++VQ+ I++ +P + I D F A ++++ +N AYI+ Sbjct: 46 YGGKISSNIALVFIELIRGTPIIVQVMFIYFAMPIMMPIRIDPFTAAVVTIMINSGAYIA 105 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 EI R +++SI KG +A A+GL+++ T+R++I P + PL +++I +K TS+ Sbjct: 106 EITRGAVLSIHKGFREAGLALGLSKRDTLRYVIAPLALRRMLPPLGNQWIVSIKDTSLFM 165 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 I + E+ + Q I++ ++ + I+ +A +YL++T + K+E + Sbjct: 166 VIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLVITLALSFVLRKVEKKLK 216 >gi|222094148|ref|YP_002528205.1| amino acid ABC transporter , permease protein [Bacillus cereus Q1] gi|221238203|gb|ACM10913.1| amino acid ABC transporter, permease protein [Bacillus cereus Q1] Length = 269 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 108/187 (57%), Gaps = 3/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + I ++P LL A IV + SLI F A RI ++ +++ I H Y+ I Sbjct: 41 FEIFISTYPTLLKATIVTLQLTLTSLLLGSLIGLLF-AFFRIS-NNKVLNSIAHVYIAII 98 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 99 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAA 157 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 158 RSLGMPYPLAMRRIVLPQAFRQSIPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGN 217 Query: 186 YQPLIIY 192 +Q L Y Sbjct: 218 FQQLDTY 224 >gi|149191455|ref|ZP_01869705.1| Putative arginine ABC transporter, permease protein [Vibrio shilonii AK1] gi|148834724|gb|EDL51711.1| Putative arginine ABC transporter, permease protein [Vibrio shilonii AK1] Length = 223 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/162 (34%), Positives = 93/162 (57%), Gaps = 10/162 (6%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSI 114 +F GTPLLVQ+F+++YG ++ +SF+ +++L LN +AY +++ + + Sbjct: 55 LFTGTPLLVQIFLVYYGPGQFEVIRESFLWTWLSQPWFCAMLALALNTAAYSTQLFKGAF 114 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IP GQW A A+G+ K T+R ++LP I + S+E I + K TS+ASTITI +I Sbjct: 115 NAIPSGQWQACRALGMDMKATLR-VLLPFAIRRAIPAYSNEVILVFKGTSLASTITIMDI 173 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 AQRI + TY L+++ YL + +I ++E Sbjct: 174 MGYAQRINAQTYDTLVVFSVAGLFYLGVNGILTLIFRQVEKK 215 >gi|170741748|ref|YP_001770403.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168196022|gb|ACA17969.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 217 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/192 (31%), Positives = 109/192 (56%), Gaps = 1/192 (0%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F +L + +T+ I S V+S ++G A++R+ ++ + ++ + RG P++ Sbjct: 10 EFVPILLQGVQLTILITLGSLVVSTVLGLVWAMMRVSGVRSL-AFASALFINVIRGIPII 68 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 VQLF I++ LP GI + A ++ L L +SAY +E R++I +I GQ +A+ IG+ Sbjct: 69 VQLFYIYFVLPDFGIALTAVQAGVLGLGLAYSAYHAENFRAAIEAIDGGQIEAAQTIGMG 128 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 T+R ++LPQ + + P + I +LK +S ASTIT+ E+ + I S T++ + Sbjct: 129 WGLTMRRVVLPQALRIALPPYGNVMIMMLKDSSQASTITVAELALQGKLIASATFKNTSV 188 Query: 192 YCELAFVYLILT 203 + +A +YL L+ Sbjct: 189 FTLVALMYLALS 200 >gi|320353113|ref|YP_004194452.1| PAAT family amino acid ABC transporter membrane protein 1 [Desulfobulbus propionicus DSM 2032] gi|320121615|gb|ADW17161.1| amino acid ABC transporter membrane protein 1, PAAT family [Desulfobulbus propionicus DSM 2032] Length = 226 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 117/201 (58%), Gaps = 13/201 (6%) Query: 9 IIDSFPQLLYAAI-----VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 I DS P LL AI VV + ++ I + IG + + + ++ L++ FYVW Sbjct: 8 IADSLPYLLAGAINTAGIVVLAMLLGLALGIVIAIG-------LVYGNRLLRLLLGFYVW 60 Query: 64 IFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FRG P+LV LF+ ++GL ++ + ++F ++ + L + AY + I R +I+S+P+GQ+ Sbjct: 61 FFRGVPVLVLLFLFYFGLFTYLNLPLNAFFSVAVVLGMTTGAYQANIFRGAILSLPRGQF 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A+ A+G++ QTIR IILPQ + S S+E+ ILK +++A I PEI AQ + Sbjct: 121 RAASALGMSDVQTIRSIILPQVLRLSIPAWSNEYSIILKDSALAFVIGAPEIMARAQFVA 180 Query: 183 STTYQPLIIYCELAFVYLILT 203 S TYQ L +Y +Y +LT Sbjct: 181 SRTYQHLPLYLTAGLLYFLLT 201 >gi|260583461|ref|ZP_05851209.1| amino acid ABC transporter amino acid-binding/permease [Granulicatella elegans ATCC 700633] gi|260158087|gb|EEW93155.1| amino acid ABC transporter amino acid-binding/permease [Granulicatella elegans ATCC 700633] Length = 257 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/151 (38%), Positives = 88/151 (58%), Gaps = 5/151 (3%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIR 111 I + I+ Y FRGTP++VQ VI+YG GI D A I +++N AY+SEI+R Sbjct: 62 IANAILTAYTEFFRGTPMIVQAMVIYYGSALAFGIDMDRTFAAIFIVSINTGAYMSEIVR 121 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 IISI KGQ++A+ AIG+T QT+ +++ PQ I +EF+ +K TSV + I++ Sbjct: 122 GGIISIDKGQFEAAQAIGMTHTQTMMNVVFPQVIRNILPATGNEFVINIKDTSVLNVISV 181 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 E++ + + ++ Y E FV LIL Sbjct: 182 SELYFATKTVAGANFR----YFETFFVTLIL 208 >gi|229826278|ref|ZP_04452347.1| hypothetical protein GCWU000182_01650 [Abiotrophia defectiva ATCC 49176] gi|229789148|gb|EEP25262.1| hypothetical protein GCWU000182_01650 [Abiotrophia defectiva ATCC 49176] Length = 224 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 117/202 (57%), Gaps = 13/202 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT--IISLIMHFYVWIFR 66 +I+ + L TL ++ I+ I+G +A+++ ++ ++ I+ Y+ I R Sbjct: 10 LINKYGNLFLIGTGYTLLLSLITVFFGTILGSVLAMLK---NNRFWLVRFIVSAYIEIVR 66 Query: 67 GTPLLVQLFVIFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 GTP+L+QL + + +P F FV++ ++L LN +AY+SE+IRS I ++ KGQ +A Sbjct: 67 GTPILLQLCIFTFLIPLAFSAFKPSDFVSVTVALILNSAAYVSEVIRSGIEAVDKGQTEA 126 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++GL ++QT+ I+LPQ I L +EFI ++K TS+AST + ++ Q I Sbjct: 127 ARSLGLNKRQTMFKIVLPQAIRYILPALGNEFIMMIKETSLASTFFVGDLMTRYQVITGA 186 Query: 185 TY---QPLIIYCELAFVYLILT 203 T+ +PLII + +Y ILT Sbjct: 187 TFLVIEPLII---IGVIYFILT 205 >gi|210630039|ref|ZP_03296224.1| hypothetical protein COLSTE_00108 [Collinsella stercoris DSM 13279] gi|210160716|gb|EEA91687.1| hypothetical protein COLSTE_00108 [Collinsella stercoris DSM 13279] Length = 229 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/182 (32%), Positives = 110/182 (60%), Gaps = 7/182 (3%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L I + Q+L + +L I ++ V +L +G +A +R ++ I Y+ + RG Sbjct: 13 LEITTMVQMLAEGFLTSLQIFALTLVGALPLGMVVAFLR-GSRCAVVRAITRVYISVMRG 71 Query: 68 TPLLVQLFVIFYGLPH----IGIVFDS-FVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 TPL++Q+F I++ +P+ I + DS + A I++ +N++AY +EI RS + SIP+GQ+ Sbjct: 72 TPLMLQMFAIYF-MPYYVFGIQLTQDSKWQATIVAFIINYAAYFAEIYRSGLQSIPRGQY 130 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ +G ++ QT +I LPQ I + +E I+++K TS+A I + E+F TA+ +V Sbjct: 131 EAAEVLGYSKPQTFCYIALPQLIKRIMPAIGNEVITLVKDTSLAFAIGVGEMFSTAKALV 190 Query: 183 ST 184 ++ Sbjct: 191 AS 192 >gi|153852847|ref|ZP_01994284.1| hypothetical protein DORLON_00266 [Dorea longicatena DSM 13814] gi|149754489|gb|EDM64420.1| hypothetical protein DORLON_00266 [Dorea longicatena DSM 13814] Length = 247 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 114/187 (60%), Gaps = 14/187 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL +A +S ++SLI+G +A+I++ ++ + + Y+ + RGTP+LVQL+V ++G+P Sbjct: 23 VTLELAVVSMIVSLILGLILALIKMK-KIPVLKQLANLYISVIRGTPVLVQLYVTYFGIP 81 Query: 83 ----HIGIVFD-----SFVAIII----SLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 I + ++ + VA II +L +N SAY +E+IR+S+ S+PKGQ +A+ A+G Sbjct: 82 MILKAINLKYETNYNANGVAPIIYAFIALAVNESAYNAEVIRASLESVPKGQIEAANALG 141 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 +T Q +R +ILP+ I + L + FI ++K TS+A + E+ + I TY+ Sbjct: 142 MTYFQALRRVILPEAIVVALPSLGNSFIGLIKGTSLAFVCAVVEMTAAGKIIAGRTYRYF 201 Query: 190 IIYCELA 196 +Y LA Sbjct: 202 EVYVSLA 208 >gi|15889637|ref|NP_355318.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] gi|15157535|gb|AAK88103.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] Length = 229 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 110/191 (57%), Gaps = 22/191 (11%) Query: 33 VISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYG----LPHIG 85 VIS+ IGF +A+ F + ++ Y FRGTPLL+QL++++YG LP I Sbjct: 25 VISVSIGFVLAIGLAFAQVSGGRVTKILARAYCTFFRGTPLLIQLWLLYYGVGSFLPMIP 84 Query: 86 IVFDSFVAII---------ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 + SF+ + +S TLN++AY +E++R +++++PKG+ +A A G+ R I Sbjct: 85 GLRQSFMWPVLREGFFFAAVSFTLNYAAYEAEVLRGALLAVPKGELEAGRAFGMGRFTLI 144 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPLIIYC 193 R I LP+ I + ++ E + LK+T +A T+T+ +++ A ++ T Y+PLI+ Sbjct: 145 RRIWLPRAIRIALPTITGEVVMQLKATPLAFTVTVMDLYAVAYKVRQDTLLVYEPLIV-- 202 Query: 194 ELAFVYLILTS 204 + YLILT+ Sbjct: 203 -VTVFYLILTA 212 >gi|193077066|gb|ABO11824.2| ABC-type amino acid transport system [Acinetobacter baumannii ATCC 17978] Length = 231 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 109/187 (58%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +++ + ++ F ++A + TL I+ IS ++++I+G I I I + +++ I F Sbjct: 1 MNWQYIHSVLPQF----FSATLTTLKISIISIILAIIVGL-ICSILITYRVRVLNRIAQF 55 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLL+QLF ++YGLP +GI D F +I LT +Y++E R+ + S+ KG Sbjct: 56 YIELSRNTPLLIQLFFLYYGLPKLGIKIDGFACGVIGLTFLGGSYMAEAFRAGLQSVAKG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q D++ +IGL Q R++I PQ + S + + + ++K +SV S I + E+ + Sbjct: 116 QIDSAKSIGLKPTQIFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKD 175 Query: 181 IVSTTYQ 187 ++ Y+ Sbjct: 176 LIGMDYK 182 >gi|34495574|ref|NP_899789.1| glutamate/aspartate transport system permease [Chromobacterium violaceum ATCC 12472] gi|34101429|gb|AAQ57798.1| glutamate/aspartate transport system permease [Chromobacterium violaceum ATCC 12472] Length = 246 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 15/170 (8%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL +A ++I+L++G + V R + I L YV +FR PLLVQLFV ++ +P Sbjct: 32 TLAVALSGWIIALLLGTVVGVARTLPNRGIAGLAT-VYVELFRNVPLLVQLFVWYFLVPD 90 Query: 84 I-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + I F F+++++ L L +A ++E +R+ I ++P+GQ +A+ A+G Sbjct: 91 LLPEGAQIWFKQDLSPTTSQFLSVVVCLGLFTAARVAEQVRTGIEALPRGQRNAAMAVGF 150 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 + QT RH++LPQ + PL+SEF++I+K++SVAS I + E+ QT Q Sbjct: 151 SLGQTYRHVLLPQAMRIIIPPLTSEFLNIIKNSSVASLIGLAELLAQTKQ 200 >gi|315633804|ref|ZP_07889093.1| arginine ABC superfamily ATP binding cassette transporter, membrane protein [Aggregatibacter segnis ATCC 33393] gi|315477054|gb|EFU67797.1| arginine ABC superfamily ATP binding cassette transporter, membrane protein [Aggregatibacter segnis ATCC 33393] Length = 220 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 120/221 (54%), Gaps = 11/221 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D F +L AA++ TL +A S V+ L +G AV+ ++ + V + RG P Sbjct: 4 DYFSLMLTAALM-TLGLAVCSLVLGLFLGMLFAVLE---ANRFVGKPTALLVALLRGLPE 59 Query: 71 LVQLFVIFYGLPHI-----G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 ++ + ++++G + G + F +F + +L+L F+AY S+ +R +I +I KGQW+ Sbjct: 60 ILVVLLVYFGSSELVELLTGEYVEFGAFGCGVFALSLIFAAYASQTLRGAIQAIAKGQWE 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 + A+GL++ T II+PQ + LS++++ +LK T++ S I + ++ + AQ I + Sbjct: 120 SGTALGLSKGYTFLRIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLMRQAQLINT 179 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 T+QP Y A +YL++T + K+E T+ V Sbjct: 180 NTHQPFTWYGIAALIYLLVTLVSQVGIRKLELRFTRFEREV 220 >gi|51595218|ref|YP_069409.1| amino acid ABC transporter, permease protein [Yersinia pseudotuberculosis IP 32953] gi|153949446|ref|YP_001402148.1| amino acid ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|170025544|ref|YP_001722049.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186894235|ref|YP_001871347.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|51588500|emb|CAH20108.1| putative amino acid ABC transporter, permease protein [Yersinia pseudotuberculosis IP 32953] gi|152960941|gb|ABS48402.1| amino acid ABC transporter, permease protein [Yersinia pseudotuberculosis IP 31758] gi|169752078|gb|ACA69596.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186697261|gb|ACC87890.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis PB1/+] Length = 217 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 53/147 (36%), Positives = 87/147 (59%), Gaps = 3/147 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y +F+GTPLL+QLF+ F+GL GI + A ++LTL SA++ +I SI ++PKG Sbjct: 55 YTELFQGTPLLMQLFLAFFGLALFGIDVSPWTAAAMALTLFTSAFLVDIWCGSIAALPKG 114 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+AS +GL+ QT+ +I PQ + + P + ++K T++AS I E+ + Sbjct: 115 QWEASRCLGLSFHQTLFRVIAPQAMRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTM 174 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCY 207 + + TYQP ++ +A Y ++ CY Sbjct: 175 LNNVTYQPFKVFGLVALGYFLM---CY 198 >gi|86360206|ref|YP_472095.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86284308|gb|ABC93368.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 229 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 113/205 (55%), Gaps = 22/205 (10%) Query: 32 FVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYG----LPHI 84 VIS++ GF IA+ F + L+ Y FRGTPLL+QL++++YG LP + Sbjct: 24 LVISVVFGFIIAIGLAFAQVSGGRLTRLLARGYCTFFRGTPLLIQLWLLYYGVGSLLPMV 83 Query: 85 G---------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+ + F +S TLN++AY +E++R +++++PKG+ +A A GL+ + Sbjct: 84 PGIRQSLFWPILREGFFFAAVSFTLNYAAYEAEVLRGALLAVPKGELEAGRAFGLSPWKL 143 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPLIIY 192 R I LP+ I + ++ E + LK+T +A T+T+ +++ A ++ T Y+PL++ Sbjct: 144 TRRIWLPRAIRIALPTIAGEIVMQLKATPLAFTVTVMDLYAVANKVRQDTLLVYEPLLV- 202 Query: 193 CELAFVYLILTSFCYIIQIKIESSV 217 + YL LT+ + +E+ V Sbjct: 203 --VTLFYLALTAVIARVLRGLEAQV 225 >gi|83643771|ref|YP_432206.1| amino acid ABC transporter permease [Hahella chejuensis KCTC 2396] gi|83631814|gb|ABC27781.1| ABC-type amino acid transport system, permease component [Hahella chejuensis KCTC 2396] Length = 225 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/225 (27%), Positives = 122/225 (54%), Gaps = 5/225 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 + ++W + + P LL AA +TL + ++++ G ++++R + IS ++ Sbjct: 4 LNWDW-DFTWEVLPDLLNAA-QITLAATLLGSLLAIAAGLMLSMLR-RSALRWISWPTYW 60 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V R TPLLVQ+F ++Y +P G+ +++L ++ AY+SE+ RS I + KG Sbjct: 61 VVEFIRSTPLLVQIFFLYYVMPEFGVSMSPMTTGVLALGAHYGAYLSEVFRSGIDGVEKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF-ISILKSTSVASTITIPEIFQTAQ 179 QW+A+ A+ L++ T R +ILPQ + + +P + + I++ K T S IT+ E+ QTA+ Sbjct: 121 QWEAARALNLSQLTTYRDVILPQAL-RAMIPATGNYIIAMFKETPQLSAITLLEMLQTAK 179 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 + S ++ L + + +YL + + ++E + +S+ Sbjct: 180 ILGSENFRYLEPFTLVGLLYLAFSIVAALGVHQVERRFPKEGFSL 224 >gi|308067589|ref|YP_003869194.1| glutamine ABC transporter permease [Paenibacillus polymyxa E681] gi|305856868|gb|ADM68656.1| Glutamine transport system permease protein glnP [Paenibacillus polymyxa E681] Length = 482 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/218 (31%), Positives = 118/218 (54%), Gaps = 4/218 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W LI S P L+ + TL +S +++ I+G +++ + + I +V Sbjct: 268 RW-GLISASLPSLI-KGMGNTLLYTLVSLLVAFILGLVFGFMKVS-HNKVFRGIATVFVD 324 Query: 64 IFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 IFRG PL+V F I++G+P + FVA +++L+LN AY++EIIR I SI GQ Sbjct: 325 IFRGIPLIVLAFFIYFGIPQALDFKMPLFVAAVLTLSLNAGAYVTEIIRGGIQSIDPGQM 384 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ ++GL + + IILPQ + ++ + LK TS+ S I + E+ Q+ + I+ Sbjct: 385 EAARSLGLPYRTAMLKIILPQAVKIMIPSFINQLVITLKDTSILSVIGLVELTQSGKIII 444 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + T+Q I+ +A +YLI+ + I ++E V + Sbjct: 445 ARTFQSFDIWLVVAVMYLIVITVLTKISNRLEGRVRRG 482 >gi|237744915|ref|ZP_04575396.1| amino acid transport system permease [Fusobacterium sp. 7_1] gi|260494696|ref|ZP_05814826.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Fusobacterium sp. 3_1_33] gi|229432144|gb|EEO42356.1| amino acid transport system permease [Fusobacterium sp. 7_1] gi|260197858|gb|EEW95375.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Fusobacterium sp. 3_1_33] Length = 236 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/166 (37%), Positives = 98/166 (59%), Gaps = 3/166 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII--ISLTLNFSAYISEIIR 111 +S I + Y+ + RGTP++VQL +I L +G + ++ + +I I+ LN AY++EIIR Sbjct: 68 LSKIAYIYIDVIRGTPVVVQL-MILANLIFVGALRETPILVIGGIAFGLNSGAYVAEIIR 126 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + I + KGQ +A A+GL+ QT+R II+PQ I L SEFI++LK TS+ I Sbjct: 127 AGIEGLDKGQMEAGRALGLSYSQTMRKIIVPQAIKNILPALVSEFIALLKETSIIGFIGG 186 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 ++ ++A I S TY+ + + +YLILTS K+E + Sbjct: 187 IDLLRSASIITSQTYRGVEPLLAVGIIYLILTSIFTAFMRKVERGL 232 >gi|330500964|ref|YP_004377833.1| amino acid ABC transporter permease [Pseudomonas mendocina NK-01] gi|328915250|gb|AEB56081.1| amino acid ABC transporter, permease protein [Pseudomonas mendocina NK-01] Length = 220 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 106/189 (56%), Gaps = 11/189 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR----IFFSDTIISLIM 58 ++W + + P LL A++ TL I F I++++G +A+ R ++ S + LI Sbjct: 4 FDW-DFALSILPDLLKASLN-TLLITFAGFAIAIVVGLLLAIARRSKHLWLSWPVAGLIE 61 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 R TPLL+Q++ +FY P+ G+ + A I+ + L+++ Y +E+ R+ + ++P Sbjct: 62 -----FIRSTPLLIQVYFLFYVFPNYGLSLTALQAGILGIALHYACYTAEVYRAGLDAVP 116 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW+A A+ ++ R IILPQ + L + +++LK T V S IT+ EI Q A Sbjct: 117 RGQWEAVTALNMSPLSAYRQIILPQALRPILPALGNYLVAMLKDTPVLSAITVVEIMQQA 176 Query: 179 QRIVSTTYQ 187 + I S +++ Sbjct: 177 KNIGSESFR 185 >gi|256027814|ref|ZP_05441648.1| amino acid ABC transporter permease [Fusobacterium sp. D11] gi|289765767|ref|ZP_06525145.1| amino acid transport system permease [Fusobacterium sp. D11] gi|289717322|gb|EFD81334.1| amino acid transport system permease [Fusobacterium sp. D11] Length = 236 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/166 (37%), Positives = 98/166 (59%), Gaps = 3/166 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII--ISLTLNFSAYISEIIR 111 +S I + Y+ + RGTP++VQL +I L +G + ++ + +I I+ LN AY++EIIR Sbjct: 68 LSKIAYIYIDVIRGTPVVVQL-MILANLIFVGALRETPILVIGGIAFGLNSGAYVAEIIR 126 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + I + KGQ +A A+GL+ QT+R II+PQ I L SEFI++LK TS+ I Sbjct: 127 AGIEGLDKGQMEAGRALGLSYSQTMRKIIVPQAIKNILPALVSEFIALLKETSIIGFIGG 186 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 ++ ++A I S TY+ + + +YLILTS K+E + Sbjct: 187 IDLLRSASIITSQTYRGVEPLLAVGIIYLILTSIFTAFMRKVERGL 232 >gi|126649373|ref|ZP_01721614.1| amino acid ABC transporter (permease) [Bacillus sp. B14905] gi|126593698|gb|EAZ87621.1| amino acid ABC transporter (permease) [Bacillus sp. B14905] Length = 252 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/147 (39%), Positives = 88/147 (59%), Gaps = 2/147 (1%) Query: 59 HFYVWIFRGTPLLVQLFVIFYG-LPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 YV +FRGTP+LVQ+ +I +P I G V+ I +L LN +AY +EI R+ I S Sbjct: 77 KLYVDLFRGTPMLVQILLIHLAVIPTIFGHSLGYMVSGITALILNCAAYNAEIFRAGIQS 136 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I KGQ +A+ ++GLT Q +R +ILPQ PL +EFI++LK +S+ + I P+I Sbjct: 137 IAKGQMEAARSLGLTHNQAMRKVILPQAFRRMIPPLGNEFIALLKDSSLVTVIAAPDILY 196 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ + +++ Y A +YLILT Sbjct: 197 ASKVVAGASFRFWEPYIVAALLYLILT 223 >gi|260555375|ref|ZP_05827596.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Acinetobacter baumannii ATCC 19606] gi|260411917|gb|EEX05214.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Acinetobacter baumannii ATCC 19606] Length = 219 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 109/187 (58%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +++ + ++ F ++A + TL I+ IS ++++I+G I I I + +++ I F Sbjct: 1 MNWQYIHSVLPQF----FSATLTTLKISIISIILAIIVGL-ICSILITYRVRVLNRIAQF 55 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLL+QLF ++YGLP +GI D F +I LT +Y++E R+ + S+ KG Sbjct: 56 YIELSRNTPLLIQLFFLYYGLPKLGIKIDGFTCGVIGLTFLGGSYMAEAFRAGLQSVAKG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q D++ +IGL Q R++I PQ + S + + + ++K +SV S I + E+ + Sbjct: 116 QIDSAKSIGLQPTQIFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKD 175 Query: 181 IVSTTYQ 187 ++ Y+ Sbjct: 176 LIGMDYK 182 >gi|310778139|ref|YP_003966472.1| amino acid ABC transporter membrane protein, PAAT family [Ilyobacter polytropus DSM 2926] gi|309747462|gb|ADO82124.1| amino acid ABC transporter membrane protein, PAAT family [Ilyobacter polytropus DSM 2926] Length = 236 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 116/207 (56%), Gaps = 14/207 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIF----FSDTI-------ISLIMHFYVWIFRGTPLLV 72 ++ + ++ +I L +G +AV+R+ F +T ++LI +Y+ I RGTP +V Sbjct: 27 SVGVTLLAALIGLTVGVLLAVMRLSHFYPFKNTEKYKKTNPLNLIALWYIDIIRGTPAVV 86 Query: 73 QLFVIFYGLPHIGIVFDS--FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 QL V+ + +G + ++ FV ++ LN SAY++EIIR+ I + KGQ +AS A+G+ Sbjct: 87 QLMVL-ANVVFVGNLRNTPIFVVAALAFGLNSSAYVAEIIRAGIEGLDKGQTEASRALGM 145 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T++ II+PQ I L SEFI++LK TS+ I ++ ++A I S TY+ + Sbjct: 146 NYFLTMKEIIIPQAIKNILPALVSEFITLLKETSIVGFIGGVDLLRSANIITSQTYRGIE 205 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSV 217 + +YLI+TS K+E + Sbjct: 206 PLLAVGLIYLIMTSIFTKFMRKVEKGL 232 >gi|251788516|ref|YP_003003237.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247537137|gb|ACT05758.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 218 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 52/151 (34%), Positives = 87/151 (57%), Gaps = 3/151 (1%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + Y +F+GTPLL+QLF+ F+GL GI + A ++LTL SA++ +I S+ + Sbjct: 52 LTRLYADVFQGTPLLMQLFLAFFGLGLFGIDVSPWTAAALALTLFTSAFLVDIWHGSVQA 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQW+A +GLT QT+ +I PQ + + P + ++K T++AS I E+ + Sbjct: 112 LPRGQWEACRCLGLTFTQTLTRVIAPQAMRIAIAPTVGFSVQVIKGTALASIIGFVELTK 171 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + + TYQP ++ +A Y +L CY Sbjct: 172 AGTMLNNVTYQPFKVFGLVALGYFLL---CY 199 >gi|229194739|ref|ZP_04321530.1| Amino acid ABC transproter, permease [Bacillus cereus m1293] gi|228588750|gb|EEK46777.1| Amino acid ABC transproter, permease [Bacillus cereus m1293] Length = 233 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/187 (33%), Positives = 112/187 (59%), Gaps = 3/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A I+ TL + S ++ +IG A RI ++ +++ I H Y+ I Sbjct: 5 FEIFMSTYPTLLKATIL-TLQLTITSLLLGSLIGLLFAFFRIS-NNKVLNSIAHVYIAII 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 63 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAA 121 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 122 RSLGMPYPLAMRRIVLPQAFRQSLPPLGNQFIIGLKDSSLVAYVGMAELWGSGLSIAAGN 181 Query: 186 YQPLIIY 192 +Q L Y Sbjct: 182 FQQLDTY 188 >gi|27382025|ref|NP_773554.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27355195|dbj|BAC52179.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 222 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F+ ++D P LL+ TL +A + V++L IG V+R + L++ Sbjct: 1 MNYTFDFSPVLDGLPDLLWGC-AGTLELALSAMVLALAIGIGGVVLRESRVLALRWLVIA 59 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 F V R TP L Q++ IF+ LP +G+ D + II+L +N AY EIIR + SI K Sbjct: 60 F-VEAIRNTPFLGQIYFIFFALPLVGVRLDPTLTAIIALGVNGGAYAIEIIRGGVQSINK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A A+ L+R Q R I+L + L+S+FI + +TS+AS I+ E+ Q Sbjct: 119 GQVEAGLALSLSRAQVFRLIVLKPALRAIYPSLTSQFIMLTLTTSIASAISAYELTSVGQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I + T++ +Y + +Y ++ Sbjct: 179 TIETNTFRSFEVYGVVTLLYFAMS 202 >gi|332161761|ref|YP_004298338.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318605732|emb|CBY27230.1| histidine ABC transporter, permease protein HisM [Yersinia enterocolitica subsp. palearctica Y11] gi|325665991|gb|ADZ42635.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 240 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 114/214 (53%), Gaps = 19/214 (8%) Query: 9 IIDSFPQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIF---FSDTIISLIMHFYVW 63 I+++ P LY A + L + F++S++ G +A++ F ++ ++ + Sbjct: 6 IMEAVPTFLYSDGADMTGLAVTAKLFLLSVVPGLLLALVMAVGQAFGPRPLAWLIRSVTY 65 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIV--------------FDSFVAIIISLTLNFSAYISEI 109 FR TPL +QL +I+YGL IV D+ ++L LN SAY++E+ Sbjct: 66 FFRSTPLYLQLMLIYYGLSQFDIVQLGWQDDQPFWLLFRDATFCATLALVLNTSAYVAEL 125 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 + +++ P+ +W A A G+++ Q IR ++LP T+ L++E + +L +TS+AST+ Sbjct: 126 LAGMMVTFPRQEWVAGEAFGMSQWQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTV 185 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 T+ +I A+ + TY P I + A +YL+ T Sbjct: 186 TLLDITGVARAFYAATYSPFIPFLMAAALYLLCT 219 >gi|237741768|ref|ZP_04572249.1| amino acid transport system permease [Fusobacterium sp. 4_1_13] gi|256845096|ref|ZP_05550554.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Fusobacterium sp. 3_1_36A2] gi|294785616|ref|ZP_06750904.1| amino acid ABC transporter, permease/substrate-binding protein [Fusobacterium sp. 3_1_27] gi|229429416|gb|EEO39628.1| amino acid transport system permease [Fusobacterium sp. 4_1_13] gi|256718655|gb|EEU32210.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Fusobacterium sp. 3_1_36A2] gi|294487330|gb|EFG34692.1| amino acid ABC transporter, permease/substrate-binding protein [Fusobacterium sp. 3_1_27] Length = 236 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/175 (36%), Positives = 102/175 (58%), Gaps = 3/175 (1%) Query: 45 IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII--ISLTLNF 102 I+ F + +S I + Y+ + RGTP++VQL +I L +G + ++ + +I I+ LN Sbjct: 59 IKTFENFNPLSKIAYIYIDVIRGTPVVVQL-MILANLIFVGALRETPILLIGGIAFGLNS 117 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AY++EIIR+ I + KGQ +A A+GL+ QT+R II+PQ I L SEFI++LK Sbjct: 118 GAYVAEIIRAGIEGLDKGQMEAGRALGLSYSQTMRKIIVPQAIKNILPALVSEFITLLKE 177 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 TS+ I ++ ++A I S TY+ + + +YLILTS K+E + Sbjct: 178 TSIIGFIGGIDLLRSASIITSQTYRGVEPLLAVGIIYLILTSIFTAFMRKVERGL 232 >gi|319782219|ref|YP_004141695.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168107|gb|ADV11645.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 219 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/190 (32%), Positives = 106/190 (55%), Gaps = 5/190 (2%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWIFRGTPLLVQ 73 L+ +VT+ + + V++LI+ F + R+ FF+ + + Y+ FRGT + VQ Sbjct: 10 LILQGALVTIELTLMGSVLALIMAFLAGMGRVSRFFA---LRWLATAYIEFFRGTSIFVQ 66 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LF ++ LP IGI A +++L LN AY +E++R +I SI + Q++A A+ L R Sbjct: 67 LFWAYFVLPFIGISLTPLQAGVLALGLNVGAYAAEVVRGAIQSIGREQYEACTALNLGRW 126 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q +RHIILPQ + + I +LK+T+V S I++ ++ AQ + + T L+ + Sbjct: 127 QGMRHIILPQALLVMLPTFGNNAIELLKATAVVSLISLTDLTFQAQVVRAQTGNTLVPFT 186 Query: 194 ELAFVYLILT 203 + +Y IL Sbjct: 187 TILIIYFILA 196 >gi|229593271|ref|YP_002875390.1| putative ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229365137|emb|CAY53375.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 222 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 100/189 (52%), Gaps = 1/189 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 LL + TL + I ++ + +G AV+R + + YV + R TP LVQL Sbjct: 15 DLLLRGALFTLELTAIGAILGVALGTVGAVVRAW-KIQPFAWCFGVYVELIRNTPFLVQL 73 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F IF+GLP +G+ + A ++++ +N AY +EIIR+ I +IP+GQ +A+ A+ +TR + Sbjct: 74 FFIFFGLPSLGLKITEWQAAVLAMVINLGAYSTEIIRAGIQAIPRGQLEAAAALAMTRFE 133 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 RH++L + LSS+ I ++ ++V S I E+ A I S ++ Y Sbjct: 134 AFRHVVLLPALGKVWPALSSQIIIVMLGSAVCSQIATEELSFAANFIQSRNFRAFETYAL 193 Query: 195 LAFVYLILT 203 VYL + Sbjct: 194 TTLVYLCMA 202 >gi|300703461|ref|YP_003745063.1| amino acid transmembrane ABC transporter protein [Ralstonia solanacearum CFBP2957] gi|299071124|emb|CBJ42436.1| putative amino acid transmembrane abc transporter protein [Ralstonia solanacearum CFBP2957] Length = 231 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 124/226 (54%), Gaps = 15/226 (6%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ + Q L ++++ ++ ++FV++L +G +A++R+ S + + I YV R Sbjct: 9 LLSGQYHQWLVNGFLLSIKLSVLAFVLALPLGIVVALLRMAPSAPLRA-IGQAYVEAIRN 67 Query: 68 TPLLVQLFVIFYGLPHI------GIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLL + ++G P + ++D + +I+L L +AY++E IRS + SIP Sbjct: 68 VPLLAHMLFWYFGAPQLLPNAIRTWLYDLNYEAASAVIALVLYTAAYMAEDIRSGLRSIP 127 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 K Q +AS A+GL+ Q +R +ILPQ++ + PL S+ +++ K++S+A I + E+ A Sbjct: 128 KEQLEASRALGLSFLQAMRRVILPQSLRVTVPPLVSQTLNLWKNSSIAMVIGVAELMYEA 187 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 Q++ S T++ + YL ++ I I + S+ QH Y V Sbjct: 188 QQVESATFRGFEAFAFATAAYLTIS-----IAITVFSAWYQHRYPV 228 >gi|33592663|ref|NP_880307.1| glutamine ABC transporter permease protein [Bordetella pertussis Tohama I] gi|33601951|ref|NP_889511.1| glutamine ABC transporter permease protein [Bordetella bronchiseptica RB50] gi|33572309|emb|CAE41863.1| glutamine transport system permease protein [Bordetella pertussis Tohama I] gi|33576389|emb|CAE33467.1| glutamine transport system permease protein [Bordetella bronchiseptica RB50] gi|332382080|gb|AEE66927.1| glutamine ABC transporter permease protein [Bordetella pertussis CS] Length = 219 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 65/206 (31%), Positives = 115/206 (55%), Gaps = 5/206 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++W ++I + P LL ++ T+ I V ++G I V R + ++ + Sbjct: 1 MDFDW-SVIGTALPNLLDGTLM-TVKITFWGLVGGFVVGALIGVARAY-GPLWLAGLAQV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV + RGTP++VQ+ I++ LP + G+ D+ A I +L +N AYI+EI+R S++S+ Sbjct: 58 YVAVIRGTPIVVQVMFIYFALPLMIEGMRVDAVAAAIATLIINSGAYIAEIVRGSLLSVH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL + + +II P PL ++ I LK +S+ I + E+ + Sbjct: 118 KGLKEAGQAMGLPFYKILLYIIGPVAFRRMIPPLGNQCIISLKDSSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTS 204 Q I+++ ++ + I+ +A VYLILT Sbjct: 178 QEIMASNFRAVEIWSAVAIVYLILTG 203 >gi|322833086|ref|YP_004213113.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321168287|gb|ADW73986.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 222 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/165 (34%), Positives = 98/165 (59%), Gaps = 5/165 (3%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVA---IIISLTLNFSAYISEIIRSSII 115 H Y+ FRGTP+LVQL +I++GLP I +S A +I+ L+LN SAY++EI R++I Sbjct: 55 HLYISFFRGTPVLVQLLIIYFGLPQIIPSMNSLSAMNAVILGLSLNTSAYLAEIFRAAID 114 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSE-FISILKSTSVASTITIPEI 174 S+ KGQ +AS A GL+ + I+ PQ +A+P + +I ++K++S+A T+ + E+ Sbjct: 115 SVDKGQLEASLASGLSMFKASSRILFPQA-CRNAIPATGNVYIGLIKNSSLAFTLGVSEL 173 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + + + + + Y +A VY LT +Q ++E + + Sbjct: 174 LAAGKMVATESLKFFEAYFAVALVYWALTIIFSELQRRLEKHLGK 218 >gi|229829990|ref|ZP_04456059.1| hypothetical protein GCWU000342_02096 [Shuttleworthia satelles DSM 14600] gi|229791288|gb|EEP27402.1| hypothetical protein GCWU000342_02096 [Shuttleworthia satelles DSM 14600] Length = 216 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/180 (35%), Positives = 106/180 (58%), Gaps = 7/180 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L ++ T+ I ++ V SL +G +A + I+ I+ Y+ I RGTPL++QL V Sbjct: 10 LAGGMLTTVEIFLLTLVFSLPLGMLVA-FGYMSKNPILHWILKIYISIMRGTPLMLQLIV 68 Query: 77 IFYGLPHI-GIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 +++G +I GI S A+II+ LN++AY +EI RS I S+P GQ++A+ +G + Sbjct: 69 VYFGPYYIFGIQISSAYRGTAVIIAFALNYAAYFAEIYRSGIESMPAGQYEAARVLGYSG 128 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLI 190 QT IILPQ I +++E I+++K TS+A +I E+F A+ + ++ + PLI Sbjct: 129 SQTFFKIILPQVIKRILPSVTNEVITLVKDTSLAFSIAYAEMFTQAKALAASAHNVLPLI 188 >gi|229120015|ref|ZP_04249270.1| Amino acid ABC transproter, permease [Bacillus cereus 95/8201] gi|228663481|gb|EEL19066.1| Amino acid ABC transproter, permease [Bacillus cereus 95/8201] Length = 233 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 108/187 (57%), Gaps = 3/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A IV + SLI F A RI ++ +++ I H Y+ I Sbjct: 5 FEIFMSTYPTLLKATIVTLQLTLTSLLLGSLIGLLF-AFFRIS-NNKVLNSIAHVYIAII 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI SI +GQ +A+ Sbjct: 63 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSIDRGQMEAA 121 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 122 RSLGMPYSLAMRRIVLPQAFRQSIPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGN 181 Query: 186 YQPLIIY 192 +Q L Y Sbjct: 182 FQQLDTY 188 >gi|57504978|ref|ZP_00370930.1| amino acid ABC transporter, permease protein [Campylobacter coli RM2228] gi|305432022|ref|ZP_07401189.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter coli JV20] gi|57019250|gb|EAL55956.1| amino acid ABC transporter, permease protein [Campylobacter coli RM2228] gi|304445106|gb|EFM37752.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter coli JV20] Length = 250 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 112/194 (57%), Gaps = 14/194 (7%) Query: 19 AAIVVTLPIACISFVISLI---IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 + + TL ++ ++ +I+++ IG +A +I I+ YV +F+ PL++Q+F Sbjct: 46 SGFIYTLEVSILALLIAIVFGTIGGVMATSKI----KILRAYTRVYVELFQNIPLVIQIF 101 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +++ LP +GI D F ++ + AY+SE++RS I+S+P+GQ++AS + G T Q Sbjct: 102 FLYFALPGLGIHLDIFTIGVLGIGAYHGAYVSEVVRSGILSVPRGQFEASASQGFTYVQQ 161 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST--TYQPLIIYC 193 +R+II+PQTI P++++ ++++K+TSV I E+ +A + Y P I+ Sbjct: 162 MRYIIVPQTIKIILPPMTNQMVNLIKNTSVLLIIGGAELMHSADSYAADYGNYAPAYIFA 221 Query: 194 ELAFVYLILTSFCY 207 A +Y I+ CY Sbjct: 222 --AILYFII---CY 230 >gi|317486430|ref|ZP_07945257.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] gi|316922340|gb|EFV43599.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] Length = 255 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 53/148 (35%), Positives = 91/148 (61%), Gaps = 3/148 (2%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + H YV R TPLL+QLF +++ P IG+ F A +++L L AY++E+ R+ + Sbjct: 93 MAHVYVGCLRNTPLLLQLFFVYFLFAPAIGV--GPFGAAVLALGLFEGAYMAELFRAGLQ 150 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+P+ QW+A ++GL T+R +ILPQ + PL+S+ +S++K TS+ S I + ++ Sbjct: 151 SVPRAQWEAGISLGLGVWNTLRLVILPQAVRRMLPPLTSQLVSLIKDTSLVSAIAVADLT 210 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 AQ +++ T+ I+ +A +YL LT Sbjct: 211 MQAQVLIADTFLAFEIWLIVAALYLALT 238 >gi|260461850|ref|ZP_05810096.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|319785375|ref|YP_004144851.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|259032491|gb|EEW33756.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|317171263|gb|ADV14801.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 214 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 114/209 (54%), Gaps = 22/209 (10%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS-------DTI 53 M +W II + LL+ + TL I+ IS +S +IG + +++ DT Sbjct: 1 MHLDWG--IIWEYRALLFQGLGTTLRISLISIALSFLIGSVVGCLKVTAGFHLRKSLDTC 58 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + +I R P++V+LF I+Y GI D+ ++ +I+LTL+ AYIS+++ S Sbjct: 59 VEVI--------RDIPVVVKLFAIYYAF---GI--DASISGVIALTLHQGAYISDVVTSG 105 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++P GQW+A A GL+ +Q IILPQ I + PL+S+FI ++K++S I I + Sbjct: 106 IRALPTGQWEAGIASGLSGRQVFTRIILPQAIRITVPPLTSQFIQVVKNSSTVMLIAIED 165 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + Q+I T++ + + +YL+L Sbjct: 166 LTFMTQQIEQETFRGMEAAIAVTVLYLML 194 >gi|253690234|ref|YP_003019424.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756812|gb|ACT14888.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 244 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/227 (32%), Positives = 122/227 (53%), Gaps = 17/227 (7%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV---IRIFFSDTIISLIMHFYV 62 F + D+F +++ I +TL +A V S+ +GFF+A+ + S ++ I YV Sbjct: 3 FPFLYDTFLEII-PGIPLTLQLA----VSSVFLGFFLALGLALMQLSSFAVLRSISRTYV 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSS 113 FRGTPLLVQLF+I+YGL + +S + ++SL+L AY EIIR Sbjct: 58 LFFRGTPLLVQLFLIYYGLGQFQWIRESILWPFLREPHWCALLSLSLCTGAYACEIIRGG 117 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + S+P GQ +++ A G+ + I+ P I + +E IS++KSTS+AS IT+ E Sbjct: 118 LQSVPVGQIESARACGMPSFMIFKRIVFPLAIRQALPAYGNELISMVKSTSLASIITLME 177 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I A R+++ TY+ L ++ +YL + + + E ++T H Sbjct: 178 ITGIAARLIAETYRALEVFLVAGAIYLFINLILTRLLMWTEFTLTPH 224 >gi|148544725|ref|YP_001272095.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri DSM 20016] gi|184154077|ref|YP_001842418.1| glutamine ABC transporter permease component [Lactobacillus reuteri JCM 1112] gi|227363850|ref|ZP_03847955.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|227544432|ref|ZP_03974481.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300908279|ref|ZP_07125744.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] gi|325683060|ref|ZP_08162576.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus reuteri MM4-1A] gi|68160714|gb|AAY86803.1| lr0524 [Lactobacillus reuteri] gi|148531759|gb|ABQ83758.1| amino acid ABC transporter membrane protein 1, PAAT family [Lactobacillus reuteri DSM 20016] gi|183225421|dbj|BAG25938.1| glutamine ABC transporter permease component [Lactobacillus reuteri JCM 1112] gi|227071077|gb|EEI09395.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|227185595|gb|EEI65666.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300894526|gb|EFK87883.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] gi|324977410|gb|EGC14361.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus reuteri MM4-1A] Length = 212 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 109/198 (55%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 NLII+ + LL + T+ + I+ + SLIIG F A++ I ++ +I H YV +F Sbjct: 2 LNLIINEWHPLL-TGLWNTILCSLIALIGSLIIGTFFALLEIS-QHRVLKIIGHVYVEVF 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R PLLV F +P + + F A I LTL SA+I+E +R+ I SI GQ + + Sbjct: 60 RNIPLLVITMAFFLIIPMYVVKINGFTAGTIGLTLYTSAFIAETVRAGINSIDPGQMEGA 119 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A GLT Q +R+I+LPQ PL ++FI+++K++SV + + ++ I + T Sbjct: 120 LANGLTYGQAMRYIVLPQAFRVVIPPLGNQFINLVKNSSVLAFVAGFDLMYQGNLIANDT 179 Query: 186 YQPLIIYCELAFVYLILT 203 + Y + +YLI+T Sbjct: 180 LATMPTYFIVGIMYLIIT 197 >gi|237808727|ref|YP_002893167.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] gi|237500988|gb|ACQ93581.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] Length = 222 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 104/187 (55%), Gaps = 3/187 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y+ F+ ++ P+L ++VTL + + V +++G A R S I L Sbjct: 1 MSYQLNFHDLVPYLPEL-GQGLLVTLELTLYATVGGILLGTLGAAARTSRSRPI-RLSAG 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TP +VQLF IF+GLP +G+ ++ A +I++T+N AY +EI+R+ I + PK Sbjct: 59 IYVELIRNTPFIVQLFFIFFGLPAMGVKLTAWQAGLIAMTVNLGAYSAEILRAGIEATPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A +GLTR Q I+LP L + I ++ +SV S I++ E+ +A Sbjct: 119 GQWEAGRTLGLTRFQIFTRIVLPPAFQRIYSSLVGQCIIVMLGSSVISQISVEELTFSAN 178 Query: 180 RIVSTTY 186 I S ++ Sbjct: 179 FIQSRSF 185 >gi|330951202|gb|EGH51462.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 221 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 108/204 (52%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F ++ S LL A+ TL + I ++ + +G AV+R + + I Sbjct: 1 MAYHFDFTPVLQSIDLLLRGALF-TLELTAIGTLLGVSLGIVGAVVRAWKIQPFAT-IFA 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TP LVQLF IF+GLP +G+ + A ++++ +N AY +EI+R+ I +IPK Sbjct: 59 IYVELIRNTPFLVQLFFIFFGLPSLGVQITEWQAAVLAMVINLGAYSTEIVRAGIQAIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +AS A+ + R + RH++L + LSS+ I ++ +SV S I E+ A Sbjct: 119 GQLEASAALAMNRYEAFRHVVLVPALGKVWPALSSQIIIVMLGSSVCSQIATEELSFFAN 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I S ++ Y +YL + Sbjct: 179 FIQSRNFRSFETYIVTTLIYLAMA 202 >gi|228925611|ref|ZP_04088700.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|301052080|ref|YP_003790291.1| amino acid ABC transporter permease [Bacillus anthracis CI] gi|228834089|gb|EEM79637.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|300374249|gb|ADK03153.1| amino acid ABC transporter, permease [Bacillus cereus biovar anthracis str. CI] Length = 230 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 108/187 (57%), Gaps = 3/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A IV + SLI F A RI ++ +++ I H Y+ I Sbjct: 2 FEIFMSTYPTLLKATIVTLQLTLTSLLLGSLIGLLF-AFFRIS-NNKVLNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI SI +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSIDRGQMEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYSLAMRRIVLPQAFRQSIPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGN 178 Query: 186 YQPLIIY 192 +Q L Y Sbjct: 179 FQQLDTY 185 >gi|222082456|ref|YP_002541821.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727135|gb|ACM30224.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 213 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 63/174 (36%), Positives = 99/174 (56%), Gaps = 9/174 (5%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHF------YVWIFRGTPLLVQLFVIFYGLPHIGI 86 V+S++IGF IA I S ++S H ++ FRG PLLVQL +I+ LP IGI Sbjct: 21 VVSILIGFAIA---ILLSGMLLSQRRHLMLPAQIFISFFRGVPLLVQLLLIYNLLPVIGI 77 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 S VA II L+L +AY +E +R S+P G +++ +GL+ +Q R I +P + Sbjct: 78 NVPSIVAAIIGLSLCTAAYQAENLRGGFASVPTGLVESAEMVGLSPRQIFRRIKVPIALR 137 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 + L +E I ILK++S+ S + I E+ + AQ + +T+ PL ++ +YL Sbjct: 138 LTFPALVNEAILILKASSLVSVVGIVELTRMAQDLAGSTFLPLQLFASAGLIYL 191 >gi|242280778|ref|YP_002992907.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242123672|gb|ACS81368.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 218 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 103/171 (60%), Gaps = 5/171 (2%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEI 109 I +L H Y++I RGTPLL+QL I++G+ + + + A +++L ++ AYI+EI Sbjct: 47 DKRIFNLPAHAYIYIIRGTPLLLQLLFIYFGMRSL-VGLSALPAAVLALGIHNGAYIAEI 105 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +I SI GQ +A+ +IG++ + + I+LPQ + L ++FI LK +S+ASTI Sbjct: 106 FRGAIASISPGQMEAARSIGMSYPRAMVRIVLPQAFKRAIPSLGNQFIIALKDSSLASTI 165 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT-SFCYI---IQIKIESS 216 TI E+ +Q++ S+ + + + YLI T +F ++ I+ K+++S Sbjct: 166 TINELLLKSQQLASSNFMMMEMLTIAGVFYLIYTGAFTFLFHAIERKLDTS 216 >gi|75765095|ref|ZP_00744384.1| Glutamine transport system permease protein glnM [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74487419|gb|EAO51346.1| Glutamine transport system permease protein glnM [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 190 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 101/169 (59%), Gaps = 1/169 (0%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI 94 S I+G +AV+RI I++ + +V R PL++ F+ ++ LP IGI + FVA Sbjct: 4 SFILGVILAVMRIA-PIRILNWVGSAFVEFVRNIPLVLIAFIFYFALPVIGITLNGFVAG 62 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + H++LPQ + PL + Sbjct: 63 TVTLTVYTAAFIAEVIRAGILSVEKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGN 122 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 123 QFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFVGMFYLILT 171 >gi|126730763|ref|ZP_01746573.1| ABC-type amino acid transport system, permease component [Sagittula stellata E-37] gi|126708929|gb|EBA07985.1| ABC-type amino acid transport system, permease component [Sagittula stellata E-37] Length = 221 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 113/201 (56%), Gaps = 8/201 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI---ISLIMHFYVW 63 N +++ P +L+ + TL +A + V+ L+ F V + S + I +++ F Sbjct: 2 NTLVEYAP-ILWDGFLKTLLVAAGAGVVMLVTSFAFGVAGVSRSGWLRWPIRVMVEF--- 57 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RGT VQLF ++ LP GI D+ + II L LN +Y SE++R +I+S+P+ Q + Sbjct: 58 -LRGTSAYVQLFWAYFALPLFGIYIDAIIVGIIVLGLNVGSYGSEVVRGAILSVPRDQTE 116 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 + A+ L+R Q++R++ILPQ + + P+ + I +LK T + S ITI ++ AQ + Sbjct: 117 GAVALNLSRFQSMRYVILPQALVSMIPPMGNLAIDLLKITPLVSLITIADLTFQAQVVRQ 176 Query: 184 TTYQPLIIYCELAFVYLILTS 204 T ++IY + VY IL+S Sbjct: 177 QTNDTILIYGFVLVVYFILSS 197 >gi|322513522|ref|ZP_08066623.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Actinobacillus ureae ATCC 25976] gi|322120675|gb|EFX92566.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Actinobacillus ureae ATCC 25976] Length = 222 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 116/211 (54%), Gaps = 8/211 (3%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L+Y+A ++TL +A S V+ L++ V+ + IS ++ + RG P ++ + Sbjct: 8 LIYSATLMTLGLALASLVVGLLLSMLFVVLETS-KQSCISKPTSVFLALLRGLPEILVVL 66 Query: 76 VIFYGLPHI-----G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +IF+G + G I F +F +++L+L F+AY S+ +R +I ++P GQW++ A+ Sbjct: 67 LIFFGSTELLEKITGEYIEFSAFNCGVLALSLIFAAYASQSLRGAIQAVPNGQWESGAAL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+R T II+PQ + LS++++ +LK T++ S I + ++ + I + +QP Sbjct: 127 GLSRAHTFLKIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLMRQTDLINTNEHQP 186 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 Y A +YL +T +I ++E T+ Sbjct: 187 FTWYGLAALIYLAITLISQVIIARLEKRFTR 217 >gi|300690980|ref|YP_003751975.1| glutamine transporter subunit ; membrane component of ABC superfamily [Ralstonia solanacearum PSI07] gi|299078040|emb|CBJ50682.1| glutamine transporter subunit ; membrane component of ABC superfamily [Ralstonia solanacearum PSI07] Length = 218 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 58/205 (28%), Positives = 113/205 (55%), Gaps = 8/205 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++ +++ID+ P L A + L I ++ G ++R + + + I Sbjct: 1 MEFD-LSVVIDALPALFQGARLTVL-ITAAGLAGGMLAGLLFGLMRAY-GNALCQKIAFA 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 YV RGTP++VQ+ I++ LP HI + D+ A ++S+ +N AYI+EI+R + +S+ Sbjct: 58 YVEFVRGTPIVVQVMFIYFALPVLLHIRV--DAMTAAVVSIIVNSGAYIAEIVRGAFLSV 115 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P+G +A A+G+ + + +I P + PL ++FI LK TS+ I + E+ + Sbjct: 116 PRGLKEAGLALGMPAWRVLAFVIGPVALRRMTPPLGNQFIVSLKDTSLFIVIGVGELTRQ 175 Query: 178 AQRIVSTTYQPLIIYCELAFVYLIL 202 Q I+++ ++ + I+ +A +YL + Sbjct: 176 GQEIMASNFRAVEIWSAVAVIYLCM 200 >gi|118468211|ref|YP_889612.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC [Mycobacterium smegmatis str. MC2 155] gi|118169498|gb|ABK70394.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Mycobacterium smegmatis str. MC2 155] Length = 232 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/180 (34%), Positives = 98/180 (54%), Gaps = 15/180 (8%) Query: 7 NLIIDSFPQLLYAAIVV---TLPIACISFVISLIIGFF---IAVIRIFFSDTIISLIMHF 60 + +ID+ P L A V T+ A + V+S + G +V FS ++ Sbjct: 3 DKLIDAAPLFLQGAGVTMLYTVLGALAALVVSFVFGLMSLSGSVAARGFSRVVVEF---- 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 FRGT L++QL IF+ LP +G+ F+ A ++ LNF AY +E++R +I S+P Sbjct: 59 ----FRGTSLVIQLLWIFFVLPQLGLRFEPMAAATLAFGLNFGAYGAEVVRGAIASVPST 114 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQ 179 QW+A+ A+GL R + +R +ILPQ + P + +I ILKS+S+ I I E+ F+ Q Sbjct: 115 QWEATVALGLGRFRRMRRVILPQALPEMVPPFGNLWIQILKSSSLLYLIGITELTFEVKQ 174 >gi|34762442|ref|ZP_00143442.1| Amino acid transport system permease protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887910|gb|EAA24978.1| Amino acid transport system permease protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 236 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 63/175 (36%), Positives = 102/175 (58%), Gaps = 3/175 (1%) Query: 45 IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII--ISLTLNF 102 I+ F + +S I + Y+ + RGTP++VQL +I L +G + ++ + +I I+ LN Sbjct: 59 IKTFENFNPLSKIAYIYIDVIRGTPVVVQL-MILANLIFVGALRETPILVIGGIAFGLNS 117 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AY++EIIR+ I + KGQ +A A+GL+ QT+R II+PQ + L SEFI++LK Sbjct: 118 GAYVAEIIRAGIEGLDKGQMEAGRALGLSYSQTMRKIIVPQAVKNILPALVSEFITLLKE 177 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 TS+ I ++ ++A I S TY+ + + +YLILTS K+E + Sbjct: 178 TSIIGFIGGIDLLRSASIITSQTYRGVEPLLAVGIIYLILTSIFTAFMRKVERGL 232 >gi|301385505|ref|ZP_07233923.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] Length = 232 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 115/207 (55%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N+I DS P L + ++ TL + IS L+ + ++R+ + +++ Y ++ Sbjct: 5 YNVIWDSLP-LYFGGLLTTLKLLAISLAFGLLAALPLGLMRVS-KNPWVNMPAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +SF+ ++ +N SAY +EII S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFAAVRESFLWPWLSSATFCACLAFAINTSAYTAEIIAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G+++ + R I+LP + + P S+E I +L++TS+AS +T+ +I Sbjct: 123 TPAGEIEAARAMGMSKVKMYRRILLPSALRRALPPYSNEVIMMLQTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + Y P Y YL LT Sbjct: 183 AARTVNAQFYLPFEAYVTAGVFYLCLT 209 >gi|170721101|ref|YP_001748789.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169759104|gb|ACA72420.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 221 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 109/204 (53%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M YE+ F ++ P LL A TL + + ++ + IG A +R + ++ Sbjct: 1 MAYEFDFAPVLAQAPLLLKGAWF-TLQLTVVGTLLGVAIGVLGAGVRAWRVRPF-DMLFG 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TP +VQLF IF+GLP +GI + A ++++ +N AY +EIIR+ I +IPK Sbjct: 59 LYVELIRNTPFIVQLFFIFFGLPALGIRLTEWQAAVLAMVINLGAYSTEIIRAGIQAIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ A+ ++R + RH++L + L+S+ + ++ ++V S I E+ A Sbjct: 119 GQLEAAAALAMSRFEAFRHVVLQPALAKVWPALTSQIVIVMLGSAVCSQIATEELSFAAN 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I S ++ Y +YL++ Sbjct: 179 FIQSRNFRAFETYLLTTVLYLVMA 202 >gi|210624308|ref|ZP_03294312.1| hypothetical protein CLOHIR_02268 [Clostridium hiranonis DSM 13275] gi|210153092|gb|EEA84098.1| hypothetical protein CLOHIR_02268 [Clostridium hiranonis DSM 13275] Length = 221 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 116/209 (55%), Gaps = 10/209 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQ 73 L A I TL + ISF+ S+ + + ++R ++ IS+ F ++ FR TP + Q Sbjct: 15 LIAKIPFTLYLGVISFIASMALAIVLLIMR----NSKISIFKGFATLFISFFRSTPYITQ 70 Query: 74 LFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LF+ +YGLP + + + V+ +IS+ LN SA+I EI+R ++++ KGQ +A+ +IGL Sbjct: 71 LFIFYYGLPQLIPSLVNLSAEVSFVISVALNSSAFIVEILRGGLLAVDKGQREAALSIGL 130 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + Q + +++PQ + L + F+ +K+T++A TI + EI ++ + + + + Sbjct: 131 NKFQVMTQVVIPQAFVSILPSLGNTFVGAVKNTAIAFTIGVVEILSESKILAARGFNYME 190 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQ 219 Y VY IL ++Q ++E V + Sbjct: 191 AYIAAGIVYWILILAIDLVQNRLEKRVCK 219 >gi|167628305|ref|YP_001678804.1| glutamine abc transporter, glutamine-binding protein, putative [Heliobacterium modesticaldum Ice1] gi|167591045|gb|ABZ82793.1| glutamine abc transporter, glutamine-binding protein, putative [Heliobacterium modesticaldum Ice1] Length = 220 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/189 (32%), Positives = 102/189 (53%), Gaps = 1/189 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L + T+ +A IS +S G I +RI + YV R PL++ + Sbjct: 16 KFLMTGLQWTIELALISIALSFFFGIVICALRIS-RYPFLRYPAFLYVESLRNLPLILLI 74 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F ++ LP IG+ F A +++ T+ SA ++EIIR I S+PKGQW+A+ A G T + Sbjct: 75 FFTYFALPKIGLGLPKFWAAVVAFTIFTSALVAEIIRGGIQSVPKGQWEAARAQGFTYLE 134 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 T+ +IILPQ + PL S+FI++ K TS AS I + E+ + + I P+ ++ Sbjct: 135 TMVYIILPQALRKMIPPLISQFITLTKDTSYASIIGLTELTEHGKLIFIEHNNPVQVFFF 194 Query: 195 LAFVYLILT 203 +A +Y ++ Sbjct: 195 VACIYFVVN 203 >gi|323492514|ref|ZP_08097662.1| ABC transporter permease [Vibrio brasiliensis LMG 20546] gi|323313301|gb|EGA66417.1| ABC transporter permease [Vibrio brasiliensis LMG 20546] Length = 225 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 111/203 (54%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LII+S P L ++ T + ++ +I LI+ + V R + +I+ +++ F Sbjct: 3 FSLIIESLPIYL-DGLMTTAWLVGLALIIGLIVAIPLGVARNS-HNYLINGPSWAFIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G+ T R IILP + + S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMGTFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIVDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFESFLTAGLFYMALT 203 >gi|169829527|ref|YP_001699685.1| polar amino acid transport system permease [Lysinibacillus sphaericus C3-41] gi|168994015|gb|ACA41555.1| polar amino acid transport system permease protein [Lysinibacillus sphaericus C3-41] Length = 234 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 116/201 (57%), Gaps = 9/201 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F LI P LL + VT I S + +++G +A+ ++ + ++ I+ Y+ Sbjct: 7 FVLIAKVLPTLL-QYLPVTAEILVFSIIFGIVLGIMLAIPKLL-NVALLKQIITIYISFI 64 Query: 66 RGTPLLVQLFVIFYGLP------HIGIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RGTP+LVQLF++FYG+P HI + D+ +II+ TL+ +A +EI R++I+++ Sbjct: 65 RGTPILVQLFLVFYGVPALLKFIHIDVTRLDAMYFVIITYTLSNAAAFAEIFRAAILTVD 124 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A++++GL Q I+ PQ I + +++ IS LK TS+A +I + ++ Sbjct: 125 RGQIEAAFSVGLNGPQAFLRIVFPQAIRVAFPNIANTMISSLKDTSLAFSIGVMDMVGRG 184 Query: 179 QRIVSTTYQPLIIYCELAFVY 199 + ++++T + IY L+ VY Sbjct: 185 ETLIASTTRAFEIYVALSIVY 205 >gi|198242278|ref|YP_002216424.1| histidine ABC transporter permease HisM [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197936794|gb|ACH74127.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326624176|gb|EGE30521.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 235 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 116/216 (53%), Gaps = 11/216 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S V+ ++ +AV R+F S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLISSVVMGGLLAVILAVGRVF-SNKFIRFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTDLLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 P + A +YL+++ + + E QH S Sbjct: 199 PFTAFGIAAVLYLLISYVLISLFRRAERRWLQHVSS 234 >gi|194466984|ref|ZP_03072971.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] gi|194454020|gb|EDX42917.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] Length = 212 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 109/198 (55%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 NLII+ + LL + T+ + I+ + SLIIG F A++ I ++ +I H YV +F Sbjct: 2 LNLIINEWHPLL-TGLWNTILCSLIALIGSLIIGTFFALLEIS-QHRVVKIIGHVYVEVF 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R PLLV F +P + + F A I LTL SA+I+E +R+ I SI GQ + + Sbjct: 60 RNIPLLVITMAFFLIIPMYIVKINGFTAGTIGLTLYTSAFIAETVRAGINSIDPGQMEGA 119 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A GLT Q +R+I+LPQ PL ++FI+++K++SV + + ++ I + T Sbjct: 120 LANGLTYGQAMRYIVLPQAFRVVIPPLGNQFINLVKNSSVLAFVAGFDLMYQGNLIANDT 179 Query: 186 YQPLIIYCELAFVYLILT 203 + Y + +YLI+T Sbjct: 180 LATMPTYFIVGIMYLIIT 197 >gi|328544437|ref|YP_004304546.1| ABC transporter permease [polymorphum gilvum SL003B-26A1] gi|326414179|gb|ADZ71242.1| ABC transporter, permease protein, putative [Polymorphum gilvum SL003B-26A1] Length = 237 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 113/208 (54%), Gaps = 13/208 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++VT+ +A + L+IGF +A+ + + + + + Y +FRG P L+ LF+++Y Sbjct: 22 GVLVTVGLALATLPFGLVIGFLLALAKKA-DEPSLRMAANIYTTLFRGLPELLTLFLVYY 80 Query: 80 GLP------------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 G+ + I +SFVA +++L L FS+Y SE S+ IP+GQ++ YA Sbjct: 81 GVQILLQQAARAAGFNAFIEVNSFVAGMVALALVFSSYASEAFLSAFRGIPQGQYEGGYA 140 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GLTR +T+ IILPQ + + L + ++ +LK T++ S I + ++ + + T + Sbjct: 141 LGLTRLRTLHLIILPQLVRLALPALGNLWLILLKETALVSVIGLSDLIRQSGIAARVTKE 200 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIES 215 P + + +YL+L ++IE+ Sbjct: 201 PFLFFGVACLIYLLLAVISSFGIVRIEA 228 >gi|237665991|ref|ZP_04525979.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium butyricum E4 str. BoNT E BL5262] gi|237658938|gb|EEP56490.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium butyricum E4 str. BoNT E BL5262] Length = 221 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 115/202 (56%), Gaps = 3/202 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W N IID+ P AA +TL + I ++S+IIG ++I ++F I+ I+ Sbjct: 1 MSIDW-NFIIDNIPSYAEAA-GLTLKLGFIGIILSIIIGLVCSII-LYFKVKILEKIVQA 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLLVQ+F +++GLP +G+ +I L +Y++E RS + ++ K Sbjct: 58 YIELSRNTPLLVQIFFLYFGLPKLGLKMSETTCAVIGLAFLGGSYMAEAFRSGLEAVSKS 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q ++ +IGL++ Q IR++I+PQ + S +S+ FI +LK TS+ I+I E+ + Sbjct: 118 QIESGISIGLSKTQLIRYVIIPQAFSISMPSISANFIFLLKETSILGAISIIEVTNLTKD 177 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 ++ Y+ L VYLI+ Sbjct: 178 LIGMYYRTFESLAMLVIVYLII 199 >gi|187478451|ref|YP_786475.1| glutamine ABC transporter permease [Bordetella avium 197N] gi|115423037|emb|CAJ49568.1| glutamine ABC transporter, permease protein [Bordetella avium 197N] Length = 219 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 64/197 (32%), Positives = 109/197 (55%), Gaps = 4/197 (2%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D+ P LL I+ T+ I V I+G V R + +++I YV I RGTP+ Sbjct: 10 DALPNLLEGTIM-TVKITFWGLVGGFILGALAGVARAY-GPRAVAIIAQIYVAIIRGTPI 67 Query: 71 LVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +VQ+ I++ LP + G+ ++ A I++L +N AYI+EI+R S++S+ +G +A A+ Sbjct: 68 VVQVMFIYFALPLMIPGMRVEAESAAIVTLMINSGAYIAEIVRGSLLSVARGLKEAGQAM 127 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL + + HII P L ++ I LK +S+ I + E+ + Q I+++ ++ Sbjct: 128 GLPFWKILCHIIGPVAFRRMIPSLGNQCIISLKDSSLFIVIGVAELTRQGQEIMASNFRA 187 Query: 189 LIIYCELAFVYLILTSF 205 + I+ +A VYLILT Sbjct: 188 VEIWSAVAIVYLILTGL 204 >gi|170693091|ref|ZP_02884252.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Burkholderia graminis C4D1M] gi|170142089|gb|EDT10256.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Burkholderia graminis C4D1M] Length = 219 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 114/211 (54%), Gaps = 4/211 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 + FP LL +VT+ IA ++ V+++ + F IA T + + + YV IFRGT L Sbjct: 3 ELFP-LLLQGTLVTVEIAALATVLAIAMAF-IATAAKLAPWTPLRWLGNAYVEIFRGTSL 60 Query: 71 LVQLFVIFY--GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 LVQLF F+ LP I F I+ L L++ AY SEI+R ++ S+P GQ++A+ A+ Sbjct: 61 LVQLFWFFFVLPLPPFRIEMTPFTVAIVGLGLHYGAYGSEILRGALRSVPGGQFEAALAL 120 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 ++ +R IILPQ + + P ++ I +LK TS+ S IT+ ++ A+++ T++ Sbjct: 121 NMSPLTRMRRIILPQAMINALPPATNLMIELLKGTSLVSLITLSDLTFRARQLDEATFKT 180 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 I+ +Y +L + E V+ Sbjct: 181 AEIFMLTLVIYFVLAQILVALMRHFEHRVSH 211 >gi|238796472|ref|ZP_04639980.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia mollaretii ATCC 43969] gi|238719677|gb|EEQ11485.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia mollaretii ATCC 43969] Length = 240 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 116/214 (54%), Gaps = 19/214 (8%) Query: 9 IIDSFPQLLYAAIVVTLPIACIS--FVISLIIGFFIAVIRIF---FSDTIISLIMHFYVW 63 ++++ P LY+ T +A + F++S++ G +A++ F +S ++ + Sbjct: 6 MLEAAPTFLYSDGSDTTGLAMTAKLFLLSVVPGMLLALLMAVGQAFGPRPLSWLIRSITY 65 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIV--------------FDSFVAIIISLTLNFSAYISEI 109 FR TPL +QL +I+YGL IV D+ ++L LN SAY++E+ Sbjct: 66 FFRSTPLYLQLMLIYYGLSQFDIVQLGWQDDQPFWLLFRDATFCATLALVLNTSAYVAEL 125 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 + +++ P+ +W A A G+++ Q IR ++LP T+ L++E + +L +TS+AST+ Sbjct: 126 LAGMMVTFPRQEWVAGEAFGMSQGQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTV 185 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 T+ +I A+ ++TY P I + A +YL+ T Sbjct: 186 TLLDITGVARAFYASTYSPFIPFLMAAALYLLCT 219 >gi|149909991|ref|ZP_01898640.1| arginine/ornithine transport protein AotM [Moritella sp. PE36] gi|149807005|gb|EDM66964.1| arginine/ornithine transport protein AotM [Moritella sp. PE36] Length = 236 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 111/199 (55%), Gaps = 12/199 (6%) Query: 34 ISLIIGFFIAV-IRIFFSDTII--SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG----- 85 +S++IGFF+AV + I + + S + + ++FRGTPLL+QL++I+YG+ I Sbjct: 36 LSVVIGFFLAVPLAIMRASQYVWLSRGIWLFTYVFRGTPLLIQLYLIYYGVTMIDGIQDS 95 Query: 86 ----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 ++ D+F +++ LN +AY +EIIR S+++ KG+ +A+ A G++ Q +R IIL Sbjct: 96 AIWFLLEDAFYPCLLAFVLNTAAYSTEIIRGSLLTTDKGEIEAAQAYGMSDFQVLRRIIL 155 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 P + S+E I +L +TS+AS +T+ +I + S Y P + +YL Sbjct: 156 PSAFRRALPAYSNEVIFMLHATSIASVVTLVDITGAGYNVYSRFYAPFEAFIFAGAIYLC 215 Query: 202 LTSFCYIIQIKIESSVTQH 220 L + + ++E +H Sbjct: 216 LCFAIFAVFKRLEKRAFKH 234 >gi|295395027|ref|ZP_06805237.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Brevibacterium mcbrellneri ATCC 49030] gi|294972094|gb|EFG47959.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Brevibacterium mcbrellneri ATCC 49030] Length = 529 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 108/183 (59%), Gaps = 3/183 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+L ++P L + TL I +SF I++++G +++ + +++ I +V IF Sbjct: 317 FSLAQQTWP-ALAKGLWNTLAITVVSFAIAMVLGLVFGFMKVS-QNRVLAGIASVFVAIF 374 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTPLLV F ++GLP + G D F+A + +L LN AY++EI+R I ++ GQ +A Sbjct: 375 RGTPLLVWAFFFYFGLPQLMGTKGDVFIAGVATLALNAGAYLTEIVRGGIQAVDVGQMEA 434 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++GL ++++ +++PQ + + + ++ + LK +S+ TI E+ AQ++ ++ Sbjct: 435 ARSLGLPWGKSMQKVVVPQAVKIATPSIINQLVITLKDSSLLLTIGFAELLYQAQQVYAS 494 Query: 185 TYQ 187 ++ Sbjct: 495 NFR 497 >gi|260598727|ref|YP_003211298.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Cronobacter turicensis z3032] gi|260217904|emb|CBA32476.1| Histidine transport system permease protein hisM [Cronobacter turicensis z3032] Length = 238 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/213 (30%), Positives = 115/213 (53%), Gaps = 11/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S V+ ++ F+A+ R+ + ++ + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLIASVVMGGVLALFLAIGRVS-ENKVVWFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGL---------PHIGIVFDSFV-AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ P + F S + +++LTLN AY +EI +I ++P G+ +A+ A Sbjct: 79 YSGMYTLDVVKGTPLLNEFFRSGLNCTVLALTLNTCAYTTEIFAGAIRAVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G +R + R IILP + + S+E I +L ST++A T T+P++ + A+ I + TYQ Sbjct: 139 YGFSRFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P + A +YLI++ + K E +H Sbjct: 199 PFTAFGIAAVLYLIISYVLISLFRKAEKRWLRH 231 >gi|213156956|ref|YP_002319001.1| ABC-type amino acid transport system [Acinetobacter baumannii AB0057] gi|215483767|ref|YP_002325992.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter baumannii AB307-0294] gi|301510864|ref|ZP_07236101.1| amino acid ABC transporter membrane protein [Acinetobacter baumannii AB058] gi|301596926|ref|ZP_07241934.1| amino acid ABC transporter membrane protein [Acinetobacter baumannii AB059] gi|213056116|gb|ACJ41018.1| ABC-type amino acid transport system [Acinetobacter baumannii AB0057] gi|213988347|gb|ACJ58646.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter baumannii AB307-0294] Length = 219 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 57/187 (30%), Positives = 110/187 (58%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +++ + ++ F ++A + TL I+ IS ++++I+G +++ I + +++ I F Sbjct: 1 MNWQYIHSVLPQF----FSATLTTLKISIISIILAIIVGLICSIL-ITYRVRVLNRIAQF 55 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLL+QLF ++YGLP +GI D F +I LT +Y++E R+ + S+ KG Sbjct: 56 YIELSRNTPLLIQLFFLYYGLPKLGIKIDGFTCGVIGLTFLGGSYMAEAFRAGLQSVAKG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q D++ +IGL Q R++I PQ + S + + + ++K +SV S I + E+ + Sbjct: 116 QIDSAKSIGLQPTQIFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKD 175 Query: 181 IVSTTYQ 187 ++ Y+ Sbjct: 176 LIGMDYK 182 >gi|172063854|ref|YP_001811505.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171996371|gb|ACB67289.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 231 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 72/230 (31%), Positives = 123/230 (53%), Gaps = 12/230 (5%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 ++ +LI S P + I +TL + +S ++ + +AV R + +S+ ++ Sbjct: 3 DFLSLIEQSGPDVARG-IWITLELLVLSCTLAFALAVPLAVARTS-AYRWLSIPSRLFMS 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIV---------FDSFVAIIISLTLNFSAYISEIIRSSI 114 +FRGTPLLVQ+FV++YGL IV SF + +LTLN +AY++E IR I Sbjct: 61 VFRGTPLLVQIFVLYYGLAQFSIVRASPLWLLVGGSFSCALCALTLNLAAYMAEDIRGGI 120 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +P G+ +A+ A G++R +I+P+ I A L +E + LKST++ASTIT+ ++ Sbjct: 121 AGVPVGEKEAALAFGMSRFMLTWFVIVPRAIGIVAPTLGNEIVLQLKSTALASTITVLDL 180 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 A+RI TY + VY+ +T+ ++E + +H S+ Sbjct: 181 TGVARRISIETYTTDALMLA-GIVYVGITAVLSTALKRVEGLLNRHLGSM 229 >gi|238790815|ref|ZP_04634572.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia frederiksenii ATCC 33641] gi|238721092|gb|EEQ12775.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia frederiksenii ATCC 33641] Length = 240 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 115/214 (53%), Gaps = 19/214 (8%) Query: 9 IIDSFPQLLYAAIVVTLPIACIS--FVISLIIGFFIAVIRIF---FSDTIISLIMHFYVW 63 ++++ P LY+ T +A + F++S+ G +A++ F ++ ++ + Sbjct: 6 VLEAIPTFLYSDGSDTTGLAMTAKLFLLSVFPGLLLALLMAIGQAFGPRPLAWLIRSVTY 65 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIV--------------FDSFVAIIISLTLNFSAYISEI 109 FR TPL +QL +I+YGL IV D+ +++L LN SAY++E+ Sbjct: 66 FFRSTPLYLQLMLIYYGLSQFDIVQLGWQDDQPFWLLFRDATFCAVLALVLNTSAYVAEL 125 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 + +++ P+ +W A A G+T+ Q IR ++LP T+ L++E + +L +TS+AST+ Sbjct: 126 LAGMMVTFPRQEWVAGEAFGMTQWQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTV 185 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 T+ +I A+ + TY P I + A +YL+ T Sbjct: 186 TLLDITGVARSFYAATYSPFIPFLMAAALYLLCT 219 >gi|57167897|ref|ZP_00367037.1| amino acid ABC transporter, permease protein [Campylobacter coli RM2228] gi|57021019|gb|EAL57683.1| amino acid ABC transporter, permease protein [Campylobacter coli RM2228] Length = 261 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/172 (36%), Positives = 103/172 (59%), Gaps = 3/172 (1%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF 91 +LI F+ ++ FFS + I ++ F YV + RGTPLLVQ+ ++FY + + D + Sbjct: 74 ALICSIFLGIVICFFSLSKIIILRFFATLYVELIRGTPLLVQVLLVFYIIANSLGFDDRY 133 Query: 92 VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP 151 + I L++ +AY+SEI R+ I+S+P Q +++ A+GL+ +Q +II PQ I P Sbjct: 134 IVGIFILSMFSAAYLSEIFRAGILSVPIIQIESARALGLSERQIFLYIIFPQAIKNILAP 193 Query: 152 LSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +S + +++K +S+ S I + E+ Q+ Q + S + L Y LAF YLILT Sbjct: 194 ISGQLANLIKDSSLLSVIALNELTQSIQEVNSYIFATLEGYIVLAFAYLILT 245 >gi|293392695|ref|ZP_06637014.1| arginine ABC superfamily ATP binding cassette transporter, membrane subunit [Serratia odorifera DSM 4582] gi|291424812|gb|EFE98022.1| arginine ABC superfamily ATP binding cassette transporter, membrane subunit [Serratia odorifera DSM 4582] Length = 221 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/190 (32%), Positives = 104/190 (54%), Gaps = 2/190 (1%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P+LL A ++ T+ + ++ ++ + +G A IR ++ S I YV + R TP +VQ Sbjct: 15 PELL-AGLLTTIELTALATLMGVSLGIVGAAIRSG-RPSLTSRIWGLYVELVRNTPFVVQ 72 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LF I +GLP +G + A ++++ +N AY +EIIR+ I PKGQW+A +G +R Sbjct: 73 LFFIVFGLPSLGWKLTAGQAALLAMVINLGAYSTEIIRAGIQVTPKGQWEAGRVLGFSRS 132 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 QT I+LP ++ L S+ I ++ +SV S ++ E+ A I S T+ +Y Sbjct: 133 QTFLRIVLPPSLQRIYPALVSQCIIVMLGSSVVSQVSFEELTFAANLIQSRTFLSFEVYL 192 Query: 194 ELAFVYLILT 203 YL+L+ Sbjct: 193 VTTLFYLLLS 202 >gi|317053654|ref|YP_004118788.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316952759|gb|ADU72232.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 220 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 4/173 (2%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 A +S + L IG I + + ++ ++ YV FR TP LVQLF+I++GLP +G+ Sbjct: 28 ALLSILFGLSIGA-IGALTLVYARPGWRRLVRCYVEFFRNTPSLVQLFLIYFGLPSLGLH 86 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 VA II+L+L AY++EI+R+ ++S+P+G +A A+GL+++Q IR+++ + Sbjct: 87 LSPPVAGIIALSLYCGAYMTEILRAGLVSLPRGLSEAGEALGLSKRQIIRYVLTLPAMQN 146 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY---CELAF 197 L+S+ + L TS+ S I + EIF + + S T++ IY C L F Sbjct: 147 VFPALASQMVLTLIGTSLISQIGVEEIFHSGSFVDSRTFRSFEIYLLICGLYF 199 >gi|170741792|ref|YP_001770447.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168196066|gb|ACA18013.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 220 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 106/201 (52%), Gaps = 2/201 (0%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W ++ + LL + VT+ + L +G + + + L++ F V Sbjct: 2 YVWDFGVLWGYRWLLLNGLAVTVAFTAGIVALGLAVGLVGGLASLSRLALVRGLVLGF-V 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 IFR TP+LVQL +Y LP + G+ A +++L+ ++ +EIIR+ I+SI GQ Sbjct: 61 EIFRCTPVLVQLIWFYYALPILTGLEMSPVTASLLALSCYGGSFYAEIIRAGIVSIDAGQ 120 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A A+G+T QT+R IILPQ PL ++ I LK+TS+ S + +P++ AQ Sbjct: 121 GEAGAALGMTPGQTMRRIILPQAFRRMVPPLMNQSIIQLKNTSLVSVLAVPDLVYQAQVA 180 Query: 182 VSTTYQPLIIYCELAFVYLIL 202 +Y+PL Y +A Y ++ Sbjct: 181 AHDSYRPLETYTAVAVAYFVI 201 >gi|229154119|ref|ZP_04282244.1| Amino acid ABC transproter, permease [Bacillus cereus ATCC 4342] gi|228629399|gb|EEK86101.1| Amino acid ABC transproter, permease [Bacillus cereus ATCC 4342] Length = 230 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 74/225 (32%), Positives = 121/225 (53%), Gaps = 13/225 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A IV + SLI F A RI ++ +++ I H Y+ I Sbjct: 2 FEIFMSTYPTLLKATIVTLQLTLTSLLLGSLIGLLF-AFFRIS-NNKVLNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI SI +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSIDRGQLEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYPLAMRRIVLPQAFRQSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGN 178 Query: 186 YQPLIIYC---------ELAFVYLILTSFCYIIQIKIESSVTQHT 221 +Q L Y L F YL+ +Q K +SV HT Sbjct: 179 FQQLETYMIVGLYYLVLVLLFTYLV-NLLEKRLQRKETNSVQVHT 222 >gi|196045258|ref|ZP_03112490.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus 03BB108] gi|196023842|gb|EDX62517.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus 03BB108] Length = 230 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/230 (31%), Positives = 123/230 (53%), Gaps = 13/230 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A IV + SLI F A RI ++ +++ I H Y+ I Sbjct: 2 FEIFMSTYPTLLKATIVTLQLTLTSLLLGSLIGLLF-AFFRIS-NNKVLNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYSLAMRRIVLPQAFRQSIPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGN 178 Query: 186 YQPLIIY---------CELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 +Q L Y L F YL+ +Q K +SV HT + + Sbjct: 179 FQQLDTYIIVGLYYLVLVLLFTYLV-NLLEKRLQRKETNSVQVHTKNKKE 227 >gi|118476327|ref|YP_893478.1| glutamine ABC transporter permease [Bacillus thuringiensis str. Al Hakam] gi|118415552|gb|ABK83971.1| amino acid ABC transporter membrane protein 1, PAAT family [Bacillus thuringiensis str. Al Hakam] Length = 218 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +A++RI I++ + +V R PL++ F+ ++ LP +GI Sbjct: 25 SVIALIGSFILGVVLAIMRIA-PIRILNWLGTAFVEFVRNIPLVLIAFIFYFALPVVGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + H++LPQ + Sbjct: 84 LNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQAMYHVVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|229182749|ref|ZP_04309989.1| Amino acid ABC transproter, permease [Bacillus cereus BGSC 6E1] gi|228600722|gb|EEK58302.1| Amino acid ABC transproter, permease [Bacillus cereus BGSC 6E1] Length = 233 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 63/187 (33%), Positives = 108/187 (57%), Gaps = 3/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A IV + SLI F A RI ++ +++ I H Y+ I Sbjct: 5 FEIFMSTYPTLLKATIVTLQLTLTSLLLGSLIGLLF-AFFRIS-NNKVLNSIAHVYIAII 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 63 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAA 121 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 122 RSLGMPYSLAMRRIVLPQAFRQSIPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGN 181 Query: 186 YQPLIIY 192 +Q L Y Sbjct: 182 FQQLDTY 188 >gi|239826927|ref|YP_002949551.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. WCH70] gi|239807220|gb|ACS24285.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. WCH70] Length = 216 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 61/162 (37%), Positives = 96/162 (59%), Gaps = 1/162 (0%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 IS I V R PLL+ +F ++ LP +G+ D F A I++L + SA +SEI+RS Sbjct: 51 ISQIFAVMVETIRNLPLLLIIFFTYFALPEVGLKLDKFYAAIVALVVFESAMLSEIVRSG 110 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + SI KGQ +A+ + GLT QT+ +IILPQ + P+ S+FIS+LK TS+A I++PE Sbjct: 111 LNSIDKGQIEAARSSGLTYIQTLWYIILPQALRRMVPPIVSQFISLLKDTSLAIVISLPE 170 Query: 174 IFQTAQRIVSTTYQPLI-IYCELAFVYLILTSFCYIIQIKIE 214 + AQ I +I I+ +A +Y ++ ++ ++E Sbjct: 171 LMNHAQIINGRNVNYVIPIFILVALMYFVVNYSLSLVSRRLE 212 >gi|167745542|ref|ZP_02417669.1| hypothetical protein ANACAC_00233 [Anaerostipes caccae DSM 14662] gi|167655263|gb|EDR99392.1| hypothetical protein ANACAC_00233 [Anaerostipes caccae DSM 14662] Length = 227 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 71/210 (33%), Positives = 118/210 (56%), Gaps = 19/210 (9%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+ +TL +A S + + IIG + + + I+++I YV I RGTPL+VQ+F+++Y Sbjct: 17 ALGLTLQLALASLICASIIGIIFGMFSVS-KNKILNIICKIYVDIIRGTPLVVQVFIMYY 75 Query: 80 G-----LPHIGIVFDSF----VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 G L + + +D F VA +++L+LN AY++EI+R I S+ KGQ +A+ ++GL Sbjct: 76 GVAGAFLQPMDLNWDDFGGPFVAAVVALSLNAGAYMAEIVRGGIESVDKGQMEAARSLGL 135 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP-- 188 + + +ILPQ I T + ++FI +K TS+ I I E+ +Q I T +P Sbjct: 136 PYGKAMSKVILPQAIRTMLPSIINQFIISIKDTSLVYAIGIRELTMNSQII--TANEPTS 193 Query: 189 -LIIYCELAFVYL----ILTSFCYIIQIKI 213 + IY A YL IL+ I++ K+ Sbjct: 194 VMSIYVMAAIYYLVICTILSKVANIVERKL 223 >gi|196047168|ref|ZP_03114385.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB108] gi|218901837|ref|YP_002449671.1| amino acid ABC transporter, permease protein [Bacillus cereus AH820] gi|229182975|ref|ZP_04310207.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BGSC 6E1] gi|196022038|gb|EDX60728.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB108] gi|218535045|gb|ACK87443.1| amino acid ABC transporter, permease protein [Bacillus cereus AH820] gi|228600432|gb|EEK58020.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BGSC 6E1] Length = 218 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +A++RI I++ + +V R PL++ F+ ++ LP +GI Sbjct: 25 SVIALIGSFILGVVLAIMRIA-PIRILNWLGTAFVEFVRNIPLVLIAFIFYFALPVVGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + H++LPQ + Sbjct: 84 LNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQAMYHVVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|27377336|ref|NP_768865.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27350480|dbj|BAC47490.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 217 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 118/203 (58%), Gaps = 3/203 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 MK W + + FP +L + + +T+ + S ++S ++G A++R+ ++S++ Sbjct: 1 MKGFWHD-AAEFFP-ILMSGVALTIVVTIGSLLLSTVLGLIWAMMRVS-GIKVLSMLSAS 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + + RG P++V LF +++ +P +G+ + A I+ L + +SAY +E R+ I +I KG Sbjct: 58 LINVIRGIPIIVLLFYLYFVMPDLGVTLSALQAAILGLGIAYSAYQAENFRAGIEAIDKG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ +IG+ T+R ++LPQ + P + I +LK +S ASTIT+ E+ + Sbjct: 118 QIEAAQSIGMGWWLTMRRVVLPQAVRIVLPPYGNVMIMMLKDSSQASTITVAELALQGKL 177 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I S+T++ ++ +A +YL ++ Sbjct: 178 IASSTFKNTSVFTLVALMYLTMS 200 >gi|225174438|ref|ZP_03728437.1| polar amino acid ABC transporter, inner membrane subunit [Dethiobacter alkaliphilus AHT 1] gi|225170223|gb|EEG79018.1| polar amino acid ABC transporter, inner membrane subunit [Dethiobacter alkaliphilus AHT 1] Length = 219 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 71/208 (34%), Positives = 119/208 (57%), Gaps = 10/208 (4%) Query: 1 MKYEWF-NLIIDSFPQLL---YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 M +E+ +I+ + P LL + I++T+ + FV+ ++ G RI + II Sbjct: 1 MNWEFRPEVIVAAMPALLQGMWMTIMITVGGVALGFVLGILFGLG----RIS-KNKIIFA 55 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + YV I RGTP+LVQ+F I++ +P +G + A I ++ +N AY++EI+R I Sbjct: 56 LSTTYVEIIRGTPILVQIFFIYFAMPILLGSRISNITAAIAAIAINSGAYLAEIVRGGIQ 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SI KGQ +A IG+T QT+R+II PQ P+ ++FI LK TS+ S I + ++ Sbjct: 116 SIDKGQTEAGRTIGMTPFQTMRYIIWPQAFKRIIPPMGNQFIISLKDTSLLSVIAVADLT 175 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 + Q I++ Y+ + I+ +A +YL +T Sbjct: 176 RRGQTIIAVNYRSVEIWGTVALLYLTMT 203 >gi|330446638|ref|ZP_08310290.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490829|dbj|GAA04787.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 229 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 115/203 (56%), Gaps = 8/203 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + +S +I L+ I V+R + I+ Y++ FRGTPLL+QL++I+YGL Sbjct: 20 TVWMVAVSLLIGLVCAIPIGVMRNS-DNKFIAFPAWAYIYFFRGTPLLIQLYLIYYGLSQ 78 Query: 84 I----GIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 + G ++ +++ +++ LN +AY +EIIR SI S+P+G+ +A+ A G+++ Q R Sbjct: 79 VIEVQGTLWQEAWFCALVAFILNTAAYTAEIIRGSINSMPQGEIEAAKAYGMSQLQAFRR 138 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 IILP + + S+E I ++ ++VA +TI ++ A+ + S Y P + Sbjct: 139 IILPSALRRALPAYSNEVIFMVHGSAVAGIVTIVDLTGAARIVNSRYYAPFESFLFAGLC 198 Query: 199 YLILTSFCYIIQI-KIESSVTQH 220 Y++LT F I K+E+ +H Sbjct: 199 YMVLT-FAIIWGFKKLEARYLRH 220 >gi|315640218|ref|ZP_07895336.1| His/Glu/Gln/Arg/opine ABC superfamily ATP binding cassette transporter permease [Enterococcus italicus DSM 15952] gi|315484007|gb|EFU74485.1| His/Glu/Gln/Arg/opine ABC superfamily ATP binding cassette transporter permease [Enterococcus italicus DSM 15952] Length = 236 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 120/214 (56%), Gaps = 20/214 (9%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ ++ P + +VT+ +A ++ +I +IG +A I S + + Y + Sbjct: 11 FSKVVKWLPTF-WQGTIVTVALAIMTVIIGSLIGL-LATIMKQSSFAPLRWLAKAYTQVV 68 Query: 66 RGTPLLVQLFVIFYGLPH----------IGIVFDS--FVAIIISLTLNFSAYISEIIRSS 113 RGTPLL+QLF+ YG P +G VF S F+ +++L++N AYI E++R Sbjct: 69 RGTPLLLQLFMWLYGFPIIGISIPPIPLLGDVFGSREFLTAVVALSINSGAYICELLRGG 128 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + SI KGQ +A ++GL+R QT++ II+PQ + L +EFI ++K +S+ S + + + Sbjct: 129 LESIDKGQMEAGRSLGLSRWQTMKAIIIPQAVRVVLPGLGNEFIMMIKESSIVSVVGVFD 188 Query: 174 IFQTAQRIVSTTY---QPLIIYCELAFVYLILTS 204 + T + ++TY +PLI+ + +Y +LT+ Sbjct: 189 VMYTYNIVKASTYSIFEPLIV---VGIIYFLLTA 219 >gi|269102813|ref|ZP_06155510.1| arginine ABC transporter permease protein ArtM [Photobacterium damselae subsp. damselae CIP 102761] gi|268162711|gb|EEZ41207.1| arginine ABC transporter permease protein ArtM [Photobacterium damselae subsp. damselae CIP 102761] Length = 224 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 63/195 (32%), Positives = 108/195 (55%), Gaps = 13/195 (6%) Query: 33 VISLIIGFFIAVI---RIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+SL +G +A++ + +IS + + +F GTPLLVQ+F+++YG V + Sbjct: 22 VVSLAVGCTLALLMTLSLILKTPVISQLNKGIIILFTGTPLLVQIFLVYYGPGQFEAVRN 81 Query: 90 SFV---------AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 SFV +++L LN +AY +++ + + +IP GQW A A+G+ +Q++ ++ Sbjct: 82 SFVWHWLSQPWFCAMLALALNTAAYSTQLFKGAFNAIPSGQWLACRALGMNTRQSL-GVL 140 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LP I + S+E I + K TS+ASTITI ++ AQRI TY L ++ +YL Sbjct: 141 LPFAIRRAVPAYSNEVILVFKGTSLASTITIMDLMGYAQRINGQTYDTLTVFGIAGAMYL 200 Query: 201 ILTSFCYIIQIKIES 215 ++ +I +IE Sbjct: 201 LVNGILTLIFRQIEK 215 >gi|254512963|ref|ZP_05125029.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodobacteraceae bacterium KLH11] gi|221532962|gb|EEE35957.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodobacteraceae bacterium KLH11] Length = 280 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 75/241 (31%), Positives = 134/241 (55%), Gaps = 31/241 (12%) Query: 2 KYEWFNLIIDSFPQLLYA-------------AIVVTLPIACISFVISLIIGFFIAVIRIF 48 ++W+ + PQ LY +V T+ ++ ISF+++ IG +A++R+ Sbjct: 55 NWQWYRV-----PQFLYRNTEVGFEWGEIPIGLVATIKLSVISFLLATAIGLLVALLRL- 108 Query: 49 FSDTIISLIMHF-YVWIFRGTPLLVQLFVIFYGLPHIGIVF--DSFVAIIISLTLNFSAY 105 S +I + Y+ + R PLLV L++ +Y +G +F D + A I++L + SA Sbjct: 109 -SGLVIGTAVAVGYLELIRNIPLLVLLYLFYY---VLGPIFGLDRYTASILTLAVFHSAL 164 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 ISEI R+ I +IP GQW+A+ +IG++ Q R+IILPQ++ P++ E + ++KS+++ Sbjct: 165 ISEIFRAGINAIPSGQWEAAKSIGMSTPQAYRYIILPQSVRFMLPPMTGEVVHLIKSSAI 224 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 S I + E+ + I+S TY I+ +A VYL++T + + I S + Y+VD Sbjct: 225 VSVIAVAELTTFGRNIISDTYMSFEIWFTIALVYLVVT-----LILSIGVSHLEKKYAVD 279 Query: 226 K 226 + Sbjct: 280 Q 280 >gi|169826053|ref|YP_001696211.1| amino-acid ABC transporter permease [Lysinibacillus sphaericus C3-41] gi|168990541|gb|ACA38081.1| Probable amino-acid ABC transporter permease protein [Lysinibacillus sphaericus C3-41] Length = 252 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 57/147 (38%), Positives = 88/147 (59%), Gaps = 2/147 (1%) Query: 59 HFYVWIFRGTPLLVQLFVIFYG-LPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 Y+ +FRGTP+LVQ+ +I +P I G V+ I +L LN +AY +EI R+ I S Sbjct: 77 KLYIDLFRGTPMLVQILLIHLAVIPTIFGHSLGYMVSGITALILNCAAYNAEIFRAGIQS 136 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I KGQ +A+ ++GLT Q +R +ILPQ PL +EFI++LK +S+ + I P+I Sbjct: 137 IAKGQMEAARSLGLTHNQAMRKVILPQAFRRMIPPLGNEFIALLKDSSLVTVIAAPDILY 196 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ + +++ Y A +YLILT Sbjct: 197 ASKVVAGASFRFWEPYMVAALLYLILT 223 >gi|241554175|ref|YP_002979388.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863481|gb|ACS61143.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 229 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 115/208 (55%), Gaps = 23/208 (11%) Query: 29 CISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYG----L 81 C+ VIS++ GF IA+ F + L+ Y FRGTPLL+QL++++YG L Sbjct: 22 CL-LVISVVFGFAIAIGLAFAQVSGGRLTRLLARSYCTFFRGTPLLIQLWLLYYGVGSLL 80 Query: 82 PHIG---------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 P + I+ + F +S TLN++AY +E++R +++++PKG+ +A A GL+ Sbjct: 81 PMVPGIRQSLFWPILREGFFFAAVSFTLNYAAYEAEVLRGALLAVPKGELEAGRAFGLSP 140 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPL 189 IR I LP+ I + ++ E + LK+T +A T+T+ +++ A ++ T Y+PL Sbjct: 141 WMLIRRIWLPRAIRIALPTIAGEIVMQLKATPLAFTVTVMDLYAVANKVRQDTLLVYEPL 200 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSV 217 ++ + YL LT+ + +E+ V Sbjct: 201 LV---VTLFYLALTAVIARVFRGLEAQV 225 >gi|34498542|ref|NP_902757.1| histidine transport system membrane protein M [Chromobacterium violaceum ATCC 12472] gi|34104398|gb|AAQ60756.1| histidine transport system membrane protein M [Chromobacterium violaceum ATCC 12472] Length = 221 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 88/149 (59%), Gaps = 9/149 (6%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSI 114 +FRGTPLLVQLF+I+YGL V DS +V I++ TLN +AY +EII I Sbjct: 50 VFRGTPLLVQLFIIYYGLAQFDWVRDSWAWHYLQDAYVCAILAFTLNTAAYTTEIIAGQI 109 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 + G+ +A+ ++G++ +R I+LP + + S+E I +L+ST++A +T+ ++ Sbjct: 110 RATHWGEIEAARSMGMSHWLMLRRIVLPSALRRALPAYSNEVIMMLQSTAIAGLVTLADL 169 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 A+RI S +Y P + A +YL LT Sbjct: 170 TGVARRIYSESYMPFEPFLTAALIYLALT 198 >gi|254469435|ref|ZP_05082840.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062] gi|211961270|gb|EEA96465.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062] Length = 555 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 108/179 (60%), Gaps = 14/179 (7%) Query: 37 IIGFF---IAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG-------- 85 ++GFF + + I+ ++ +++ F++ RG P+LV +++ GLP G Sbjct: 359 VLGFFTMLLVICSIYRAEHPLAIAAEFFIDTVRGIPMLV--IILYVGLPLSGAIKSASDG 416 Query: 86 -IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQT 144 I + I+++++ +SAY++EI R+ I+++PKGQ +A+ ++GL+R Q R ++LPQ Sbjct: 417 AINLSNMTRGIVAISIGYSAYMAEIFRAGILAVPKGQIEAARSLGLSRWQVARFVVLPQA 476 Query: 145 ITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ PL +EFI++LK TS+ S +++ ++ Q + ++++ P + A +Y++LT Sbjct: 477 LSIVIPPLGNEFIAMLKDTSLLSILSVRDVTQRMREFQASSFLPFAPFNSAAILYVVLT 535 >gi|317401660|gb|EFV82285.1| glutamate/aspartate transport system permease 2 [Achromobacter xylosoxidans C54] Length = 250 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 116/224 (51%), Gaps = 21/224 (9%) Query: 1 MKYEW-FNLIIDSFPQLLYA-------AIVVTLPIACISFVISLIIGFFIAVIRIFFSDT 52 M Y W +++ ++ P ++ + TL +A ++V SL++G + V+R S Sbjct: 1 MNYNWSWSIFLEMSPDGVHTFLETILIGVGWTLALALTAWVFSLLLGSCLGVMRTA-SSR 59 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIV-------FDSFVAIIISLTL 100 + + I YV IFR PLLVQ+F+ ++ LP + G+ + F+ ++ L Sbjct: 60 LANAIGATYVEIFRNVPLLVQMFLWYFVLPELLPHAWGLAMKQMPQPWGQFLPAVLCLGF 119 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 SA ++E +R+ I S+P+GQ+ A A+GLT Q RHIILP+ PL+SEF+ + Sbjct: 120 YGSARVAEQLRAGIQSLPRGQFQAGTALGLTETQVYRHIILPEAYRIVLPPLTSEFMGTI 179 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 K +SVA TI + E+ + + ++ + +YLIL Sbjct: 180 KYSSVALTIGLLELTGQTRSMAEFSFHIFEAFTAATVIYLILNG 223 >gi|311107288|ref|YP_003980141.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Achromobacter xylosoxidans A8] gi|310761977|gb|ADP17426.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Achromobacter xylosoxidans A8] Length = 217 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 115/216 (53%), Gaps = 8/216 (3%) Query: 6 FNLIIDSFPQL---LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 LI + F +L L + VTL I + V+++ + + R+ S + I YV Sbjct: 1 MRLISEHFAELVPPLLQGLAVTLEIMAGAVVLAVPLALAAGIGRLS-SLRPLRWIAAVYV 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +FRGT LVQLF ++ LP G+ + + I+ L LN AY +E++R +I ++P GQ Sbjct: 60 EVFRGTSALVQLFWFYFVLPLFGVQLPAMLVGIVVLALNAGAYGAEVVRGAIRAVPPGQR 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A A+ LTR Q +R I++PQ + P + I +LK+T++ S ITI ++ Q + Sbjct: 120 EAGVALNLTRGQIMRRIVVPQAVPAMLPPAGNLLIELLKNTALVSLITITDLTFRGQLLR 179 Query: 183 STTYQPLIIYCELAFVY----LILTSFCYIIQIKIE 214 S T + I+ + +Y L++T+ +++ K+ Sbjct: 180 SETLRTTEIFTLMLLMYFAVALLITAGVRLLERKVR 215 >gi|308174444|ref|YP_003921149.1| glutamine ABC transporter permease [Bacillus amyloliquefaciens DSM 7] gi|307607308|emb|CBI43679.1| glutamine ABC transporter (permease) [Bacillus amyloliquefaciens DSM 7] Length = 214 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 113/201 (56%), Gaps = 13/201 (6%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E F++ +D F L A+ I+ S +G IAV+RI + I I YV Sbjct: 8 ENFDMYMDGFLHTLLASF--------IALAGSFALGVLIAVMRIT-AFKPIQWIGTAYVE 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 R PLL+ FV ++GLP+ G+ D F A I+LT+ SA+I+E IR+ I ++ KGQ + Sbjct: 59 FIRNIPLLLITFVFYFGLPNAGLRLDGFQAGTIALTIYTSAFIAEAIRAGIQTVSKGQME 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ + G T Q +R++ILPQ + PL ++F++++K++S+ + ++ A + S Sbjct: 119 AARSSGFTYSQAMRYVILPQAVKIVIPPLGNQFLNLVKNSSILGVVAGLDLMYQADLVSS 178 Query: 184 TTYQPLIIY-CELAFVYLILT 203 +T L+++ +A YL+LT Sbjct: 179 ST---LVVFDVFVALFYLMLT 196 >gi|222080875|ref|YP_002540238.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725554|gb|ACM28643.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 220 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/184 (35%), Positives = 107/184 (58%), Gaps = 6/184 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFYVW 63 ++ I+ P+LL + ++L + +S ++ + G +A+ + S + +SLI+ V Sbjct: 5 YDEIVSWMPELL-GGLSISLQVTVLSLLLGIPFGLLLALGVLARSKALRAVSLIL---VE 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RG P LV L I++GLP +G+ +SF A +I+L N AY SEIIR+S+ SI GQ + Sbjct: 61 VGRGAPALVLLQFIYFGLPSVGLTIESFAAAVIALAWNTGAYTSEIIRASLQSIAHGQRE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GL R +R ++LPQ + + L I I + TS+ TI +PE+ A I S Sbjct: 121 AAEALGLNRTDELRFVLLPQGLRVALPALLGFSILIFQGTSLCFTIALPELVSRAYEIGS 180 Query: 184 TTYQ 187 TT++ Sbjct: 181 TTFR 184 >gi|224372630|ref|YP_002607002.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Nautilia profundicola AmH] gi|223589466|gb|ACM93202.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Nautilia profundicola AmH] Length = 272 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 112/211 (53%), Gaps = 12/211 (5%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + +T +A S S IIG + R + S II + Y+ + R TPLL+ +F +F Sbjct: 62 GGLALTFILAITSIFFSFIIGSIFGIAR-WSSIKIIKIPAILYIELLRATPLLMVIFWVF 120 Query: 79 YGLPHIGIVF-------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 + +P + F VA II+ TL SAY++EI+R+ I SIPKGQ++A+ ++G Sbjct: 121 FAIPVFSMAFFHTQAHVSPTVAAIIAFTLFTSAYVAEIVRAGINSIPKGQFEAAKSLGFN 180 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 QT +IILPQ S+F+++ K TS+A TI + E F+ A I + Y I Sbjct: 181 STQTFIYIILPQAYRKMIPAFVSQFVALFKDTSLAYTIGVIEFFRAATIINNRLYLSFEI 240 Query: 192 YCELAFVY----LILTSFCYIIQIKIESSVT 218 + +A VY ++ F ++++ K+E + Sbjct: 241 FSFVALVYFSIAFSMSKFSHMLEKKVEKQLN 271 >gi|254439200|ref|ZP_05052694.1| ABC transporter, permease protein, putative [Octadecabacter antarcticus 307] gi|198254646|gb|EDY78960.1| ABC transporter, permease protein, putative [Octadecabacter antarcticus 307] Length = 247 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 2/180 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I+ S +IS+++G IA+ + + YV I R P+LV + ++YGLP Sbjct: 49 TILISVTSILISVVLGLLIALPGLS-EKRGWRMFNRTYVEIVRSVPILVLILWVYYGLPT 107 Query: 84 I-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + GI F + +++L L+ SA+ +EI R+ I SI +GQ++A+ ++ L + T+R+IILP Sbjct: 108 VSGITLSVFWSGVLALALSDSAFQAEIFRAGIQSIGRGQYEAAQSVSLNYRDTMRYIILP 167 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q I L ++ + +LK +S+ S I + E+ + A +V + Y+PL IY L YL L Sbjct: 168 QAIRRILPALGNQLVYMLKMSSLVSVIGLQELTRRANELVVSEYRPLEIYSVLVLQYLFL 227 >gi|28869962|ref|NP_792581.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28853207|gb|AAO56276.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 220 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 105/185 (56%), Gaps = 6/185 (3%) Query: 34 ISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 IS+ IG I ++ F + ++ YV + R TP+LV + +I++ LP +GI D Sbjct: 30 ISIAIGCVIGLMNAFALLSRYRALRIVASIYVTVVRNTPILVLILLIYFALPGLGIRLDK 89 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 + +++L+L AY++E+ R+ ++SI KGQ +A AIGL Q +II+P + Sbjct: 90 LASFVVTLSLYAGAYLTEVFRAGLLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLP 149 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 LS+ FIS+ K TS+A+ I +PE+ A++I +Y+ + + +Y++ CY+I Sbjct: 150 ALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYRVIETWLVTTALYVVA---CYVIA 206 Query: 211 IKIES 215 + + + Sbjct: 207 MLLRT 211 >gi|24372629|ref|NP_716671.1| amino acid ABC transporter, permease protein [Shewanella oneidensis MR-1] gi|24346665|gb|AAN54116.1|AE015549_2 amino acid ABC transporter, permease protein [Shewanella oneidensis MR-1] Length = 226 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/163 (38%), Positives = 94/163 (57%), Gaps = 3/163 (1%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV + RGTP++VQL VI Y + + D A II+ LN AYISEIIR+ I ++ Sbjct: 65 ELYVGVIRGTPVVVQL-VILYFIVLAALDVDKITAAIIAFGLNSGAYISEIIRAGIQAVD 123 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A+ ++GL++ T++ IILPQ I L +EFI +LK T+V I ++ + Sbjct: 124 KGQTEAARSLGLSQAMTMKLIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAG 183 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQH 220 + I S T++ + A +YL LT SF +++ K E + Q Sbjct: 184 EIIRSRTFEDSVPLFTCALIYLFLTYSFTFMLS-KFEKRLKQS 225 >gi|330977256|gb|EGH77212.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 221 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 109/204 (53%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F ++ S LL A+ TL + I ++ + +G AV+R + + I Sbjct: 1 MAYHFDFTPVLQSIDLLLRGALF-TLELTAIGTLLGVSLGIVGAVVRAWKIQPFAT-IFA 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TP LVQLF IF+GLP +G+ + A ++++ +N AY +EI+R+ I +IPK Sbjct: 59 IYVELIRNTPFLVQLFFIFFGLPSLGVQITEWQAAVLAMVINLGAYSTEIVRAGIQAIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +AS A+ ++R + RH++L + LSS+ I ++ +SV S I E+ A Sbjct: 119 GQLEASAALAVSRYEAFRHVVLVPALGKVWPALSSQIIIVMLGSSVCSQIATEELSFYAN 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I S ++ Y +YL + Sbjct: 179 FIQSRNFRSFETYIVTTLIYLAMA 202 >gi|315124439|ref|YP_004066443.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018161|gb|ADT66254.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 233 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 66/196 (33%), Positives = 113/196 (57%), Gaps = 5/196 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRG 67 I ++ + + TL I+ S ++S+I+G V F +I+ L + FY+ + RG Sbjct: 25 IATYKEKFLQGFLNTLIISFFSLLLSIILG---GVFCAFSLSSIVFLRFLSTFYIELIRG 81 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLLVQ+ +++Y + + + + +VA +I L+ + Y++EI R+ I+SI Q +++ A Sbjct: 82 TPLLVQVLLMYYIIANNLGLDNRYVAGVIILSCFSATYLAEIFRAGILSISISQLESARA 141 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL Q ++I PQ + PLS +F +++K +S+ S I + E+ Q+AQ I S T+ Sbjct: 142 LGLKEMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQSAQEINSYTFA 201 Query: 188 PLIIYCELAFVYLILT 203 L Y LA YLILT Sbjct: 202 TLEAYVILAITYLILT 217 >gi|153009566|ref|YP_001370781.1| polar amino acid ABC transporter inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151561454|gb|ABS14952.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 240 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 111/205 (54%), Gaps = 13/205 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D + + ++VT+ +A + + L +GF +A+ + ++ I L + Y IFRG P Sbjct: 13 DGWGASIAWGLLVTVSLALATLPVGLALGFLVAIGKQS-TEPSIRLASNIYTTIFRGLPE 71 Query: 71 LVQLFVIFYGLP------------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 L+ LF++++G + ++F A +++L FS+Y SE+ S+ +IP Sbjct: 72 LLTLFLVYFGASLGLQRLLSLFGIEANVEINAFGAGMVALGFVFSSYSSEVFLSAFRAIP 131 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ++ YA+GL+ QT+R +ILPQ I + L++ ++ +LK TS+ S IT+ +I + Sbjct: 132 RGQYEGGYAVGLSHWQTMRKVILPQLIRIALPGLANLWLVLLKDTSLVSVITLSDILRQT 191 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT 203 T +P + + +YL+L Sbjct: 192 SIAARVTKEPFLFFGIACLLYLVLA 216 >gi|121609113|ref|YP_996920.1| beta tubulin [Verminephrobacter eiseniae EF01-2] gi|121553753|gb|ABM57902.1| Beta tubulin, autoregulation binding site [Verminephrobacter eiseniae EF01-2] Length = 222 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 111/207 (53%), Gaps = 3/207 (1%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 LL +VT+ IA S ++++++ +R ++ + YV +FRGT LLVQLF Sbjct: 7 LLMKGTLVTIEIALYSILLAIVMAGLATALRTA-PLRVVRWTGNIYVEVFRGTSLLVQLF 65 Query: 76 VIFYGLP--HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 F+ LP I F I+ L L++ AY SE++R ++ S+P GQ++A+ A+ ++ Sbjct: 66 WFFFVLPLAPFNIELTPFTVAIVGLGLHYGAYGSELLRGALHSVPNGQYEAALALNMSAA 125 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 +R I+LPQ + + P ++ I +LK TS+ S IT+ ++ A+++ +T++ I+ Sbjct: 126 TRMRRIVLPQALLNALPPATNLMIELLKGTSLVSLITLSDLTFRARQLDESTFRTAEIFS 185 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQH 220 +Y +L +E + +H Sbjct: 186 LTLVIYFVLAQTISYAMRHVERRLGKH 212 >gi|49476791|ref|YP_034685.1| amino acid ABC transporter permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|218901559|ref|YP_002449393.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus AH820] gi|228913104|ref|ZP_04076743.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|49328347|gb|AAT58993.1| amino acid ABC transporter, permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|218536304|gb|ACK88702.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus AH820] gi|228846509|gb|EEM91522.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 230 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 63/187 (33%), Positives = 108/187 (57%), Gaps = 3/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A IV + SLI F A RI ++ +++ I H Y+ I Sbjct: 2 FEIFMSTYPTLLKATIVTLQLTLTSLLLGSLIGLLF-AFFRIS-NNKVLNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYSLAMRRIVLPQAFRQSIPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGN 178 Query: 186 YQPLIIY 192 +Q L Y Sbjct: 179 FQQLDTY 185 >gi|307727763|ref|YP_003910976.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307588288|gb|ADN61685.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 248 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 86/143 (60%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TP +VQLF +F+GLP +GI D A I+++T+N AY EI+R+ I SI +G Sbjct: 60 YVELIRNTPFIVQLFFVFFGLPSLGIHIDEIQAAILAMTVNLGAYAIEIVRAGIDSISRG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q A+ A+GL +Q R+++LPQ + L S+ + ++ ++V S I++P++ A Sbjct: 120 QVQAAQALGLHGRQVFRYVVLPQALANVFPALLSQVLIVMLGSAVVSQISVPDLTYAANF 179 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I S ++ Y + YL+L+ Sbjct: 180 IQSRNFRSFESYVIITATYLLLS 202 >gi|317046297|ref|YP_004113945.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316947914|gb|ADU67389.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 509 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 108/192 (56%), Gaps = 7/192 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 L+ V+ + + + ++IGFF+A+ + F I L + Y++ RGTP+L+Q Sbjct: 14 LWQGAVIAVELLVGALAGGILIGFFLALASTSKYLF----IRLPVKIYIYTLRGTPVLLQ 69 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 L +++ LP G+ F F + +++L +N +A+ +EIIR I++ + Q A+ A G +R Sbjct: 70 LILLYNVLPEFGLRFSPFTSALLALMINETAFCAEIIRGGIMATDRDQSMAAQAFGYSRT 129 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + + H+++PQ + + +E + +LKSTS+AS + + E+ Q IVS + + + Sbjct: 130 KEMIHVVIPQALRAILPTMGNETVGLLKSTSLASVVGVNELTMRGQAIVSQNFLFIPVLV 189 Query: 194 ELAFVYLILTSF 205 +YLIL++ Sbjct: 190 ASGGIYLILSTL 201 >gi|206974269|ref|ZP_03235186.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus H3081.97] gi|217957949|ref|YP_002336493.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus AH187] gi|229137212|ref|ZP_04265829.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST26] gi|206747509|gb|EDZ58899.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus H3081.97] gi|217064262|gb|ACJ78512.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus AH187] gi|228646207|gb|EEL02424.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST26] Length = 230 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 108/187 (57%), Gaps = 3/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + I ++P LL A IV + SLI F A RI ++ +++ I H Y+ I Sbjct: 2 FEIFISTYPTLLKATIVTLQLTLTSLLLGSLIGLLF-AFFRIS-NNKVLNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYPLAMRRIVLPQAFRQSIPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGN 178 Query: 186 YQPLIIY 192 +Q L Y Sbjct: 179 FQQLDTY 185 >gi|322508068|gb|ADX03522.1| Putative amino acid transport protein [Acinetobacter baumannii 1656-2] gi|323517650|gb|ADX92031.1| amino acid ABC transporter membrane protein [Acinetobacter baumannii TCDC-AB0715] Length = 211 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 103/175 (58%), Gaps = 2/175 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 PQ ++A + TL I+ IS ++++I+G I I I + +++ I FY+ + R TPLL+ Sbjct: 2 LPQF-FSATLTTLKISIISIILAIIVGL-ICSILITYHVRVLNRIAQFYIELSRNTPLLI 59 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF ++YGLP +GI D F +I LT +Y++E R+ + S+ KGQ D++ +IGL Sbjct: 60 QLFFLYYGLPKLGIKIDGFACGVIGLTFLGGSYMAEAFRAGLQSVAKGQIDSAKSIGLKP 119 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 Q R++I PQ + S + + + ++K +SV S I + E+ + ++ Y+ Sbjct: 120 TQIFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKDLIGMDYK 174 >gi|269139653|ref|YP_003296354.1| glutamine ABC transporter permease component [Edwardsiella tarda EIB202] gi|267985314|gb|ACY85143.1| glutamine ABC transporter permease component [Edwardsiella tarda EIB202] gi|304559523|gb|ADM42187.1| Glutamine transport system permease protein GlnP [Edwardsiella tarda FL6-60] Length = 218 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 126/219 (57%), Gaps = 4/219 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I D+ P LL A +TL I+ + + LIIG R F + + I Sbjct: 1 MQFDW-SAIWDAIPLLLEGA-KLTLWISVLGLLGGLIIGLAAGFARAF-GGWLSNHIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 ++ + RGTP++VQ+ I++ LP + + D F A +I++ +N AYI+EI R +++SI Sbjct: 58 FIELIRGTPIVVQVMFIYFALPMMMPLRIDPFSAAVITIMINSGAYIAEITRGAVLSIHS 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G +A A+GL+R+ T+R++I+P + PL +++I +K TS+ I + E+ + Q Sbjct: 118 GFREAGLALGLSRRDTLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 I++ ++ + I+ +A +YLI+T + ++E + Sbjct: 178 EIIAGNFRAMEIWSAVAVIYLIMTLALSFVLRRLEKRLK 216 >gi|227551338|ref|ZP_03981387.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] gi|257887548|ref|ZP_05667201.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257896042|ref|ZP_05675695.1| amino acid ABC transporter [Enterococcus faecium Com12] gi|293378786|ref|ZP_06624943.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] gi|227179549|gb|EEI60521.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] gi|257823602|gb|EEV50534.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257832607|gb|EEV59028.1| amino acid ABC transporter [Enterococcus faecium Com12] gi|292642579|gb|EFF60732.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] Length = 218 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 60/177 (33%), Positives = 102/177 (57%), Gaps = 7/177 (3%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W N+ + L + VT+ ++ S + S +IG VIR F + +S I+ + Sbjct: 7 FSWMNV------RFLLEGLKVTVEVSLFSIIFSFLIGGLAGVIR-FANIPFLSKILGIVI 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++ LP IGI + F + + +LT+ SA +SEI R+ + ++PKGQ Sbjct: 60 DIIRNLPLLLIIFFTYFALPQIGIQMNIFWSAVAALTIFESAMLSEIFRAGLNAVPKGQM 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +A + GLT +T+R I+LPQ + + S+ IS++K TS+A I++PE+ A+ Sbjct: 120 EAGLSTGLTYVETMRTIVLPQAFKSMIPAIVSQLISLIKDTSLAVIISLPELSHQAR 176 >gi|227894251|ref|ZP_04012056.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] gi|227863971|gb|EEJ71392.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] Length = 494 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 109/183 (59%), Gaps = 7/183 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I S +I +++G +A++R+ + ++ I Y+ RGTP +VQ+ +++G+ Sbjct: 298 TIVITVFSVLIGIVLGMLLALMRLS-QNKLLHWIAVCYIEFIRGTPQMVQILFVYFGIGV 356 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + + VA II++ LN AY++E IRS I S+ KGQ +A+ ++GL++ + R++I+PQ Sbjct: 357 LISNLSALVAGIIAIGLNSGAYVAEDIRSGISSVAKGQTEAARSLGLSQAKAYRYVIIPQ 416 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCELAFVYL 200 + L +EFI++LK +S+ S I + E+ + I ++TY+ PL I +Y Sbjct: 417 ALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGVLPLFIAM---IIYF 473 Query: 201 ILT 203 I+T Sbjct: 474 IMT 476 >gi|154505132|ref|ZP_02041870.1| hypothetical protein RUMGNA_02645 [Ruminococcus gnavus ATCC 29149] gi|153794611|gb|EDN77031.1| hypothetical protein RUMGNA_02645 [Ruminococcus gnavus ATCC 29149] Length = 228 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 66/221 (29%), Positives = 116/221 (52%), Gaps = 11/221 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMHFYV 62 N I D LL + VT+ + + ++ +IIGF +A+IR T I++ I Y+ Sbjct: 10 NFIEDDRWLLLVNGLKVTILVTLFALLVGVIIGFTVAIIRSLHDKTGKFKILNAICKVYL 69 Query: 63 WIFRGTPLLVQ---LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 I RGTP ++Q ++++ +G + +S V ++ +N AY++EI+RS I++IP+ Sbjct: 70 TIIRGTPSMIQVLFMYLVVFGASSL----NSIVIGGLAFGINSGAYVAEIVRSGIMAIPE 125 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A ++GL+ QT+R II+PQ L +E I ++K T++ I ++ + A Sbjct: 126 GQTEAGRSLGLSYGQTMRLIIMPQAFKNVLPALVNEMIVLIKETAIIGYIGEQDLTKAAM 185 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I S T++ I A +YL L K+E + + Sbjct: 186 VIQSRTFEAFIPLITAAVIYLALVMLLTFFMNKLERRLRTN 226 >gi|89091826|ref|ZP_01164781.1| hypothetical protein MED92_06661 [Oceanospirillum sp. MED92] gi|89083561|gb|EAR62778.1| hypothetical protein MED92_06661 [Oceanospirillum sp. MED92] Length = 221 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 117/209 (55%), Gaps = 3/209 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M YE+ +N++ P+LL A V TL ++ +S V+ + I F+A+ ++ + + + Sbjct: 1 MDYEFHWNIVFQKMPELLQGAFV-TLHVSVLSMVLGIAIAVFLAIAKMN-NTKPFNYVAV 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 ++ I R TP L Q+++ ++GL GI ++A++ +L + Y++E R SIP Sbjct: 59 GWIEIARNTPALFQIYMAYFGLGAFGIHLSPYMAVLSALVFINAGYLAETFRGGFQSIPD 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q++AS ++G+T QT R+IILPQ P++++F+ + +S+ + + E+ Q Sbjct: 119 AQYNASKSLGMTSFQTYRYIILPQMFRRIYHPMTNQFVWSILMSSLGILVGMSELSGETQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYI 208 R+ S +++ L + A +Y I+T F I Sbjct: 179 RLQSLSFRTLEFFIVTAVLYYIITKFVLI 207 >gi|332160646|ref|YP_004297223.1| ABC-type amino acid transport system, permease component [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604516|emb|CBY26014.1| putative amino acid ABC transporter, permease protein [Yersinia enterocolitica subsp. palearctica Y11] gi|325664876|gb|ADZ41520.1| ABC-type amino acid transport system, permease component [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862544|emb|CBX72699.1| hypothetical protein YEW_JG40470 [Yersinia enterocolitica W22703] Length = 217 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 53/147 (36%), Positives = 87/147 (59%), Gaps = 3/147 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y +F+GTPLL+QLF+ F+GL +GI + A ++LTL SA++ +I SI ++PKG Sbjct: 55 YTELFQGTPLLMQLFLAFFGLALLGIDVSPWAAAAMALTLFTSAFLVDIWCGSIDALPKG 114 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+AS +GL+ QT+ +I PQ + P + ++K T++AS I E+ + Sbjct: 115 QWEASRCLGLSFSQTLFRVIAPQATRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTM 174 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCY 207 + + TYQP ++ +A Y ++ CY Sbjct: 175 LNNVTYQPFKVFGLVALGYFLM---CY 198 >gi|227818836|ref|YP_002822807.1| amino acid ABC transporter permease [Sinorhizobium fredii NGR234] gi|36959094|gb|AAQ87519.1| Transporter [Sinorhizobium fredii NGR234] gi|227337835|gb|ACP22054.1| probable amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 222 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 118/205 (57%), Gaps = 3/205 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F ++D P+LL+ ++ TL +A +++L+IG V R S+ + ++ Sbjct: 1 MTYGFDFGAVLDRAPELLWGSLG-TLGLALAGMLLALVIGILGVVARTSKSEIARTPVIV 59 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 F V + R TP LVQ+F I++ LP +GI + V I++L +N AY EIIR + S+ + Sbjct: 60 F-VEVVRNTPFLVQIFFIYFALPLMGIRLNPTVTAILALGINGGAYAIEIIRGGVESVSR 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A +A+GL + R I+L + L+S+FI + +TSV ++I E+ AQ Sbjct: 119 GQIEAGFALGLHKADVFRLIVLKPALRAIYPSLTSQFIMLTLTTSVCTSIAAYELTSAAQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTS 204 RI S T++ +Y + +YL++++ Sbjct: 179 RIESDTFRSFEVYFTVTAIYLVIST 203 >gi|293602768|ref|ZP_06685208.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292818784|gb|EFF77825.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 222 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 107/204 (52%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y++ F ++D P +L I VT+ + V + +G A +R + + + Sbjct: 1 MAYQYDFASVLDYTP-VLIKGIGVTVELIAFGAVAGVALGIVCAWVRTQ-GPRWLRVPVT 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TP L+QLF +F+GLP +G+ A +++ LN AY +EIIR+ I + PK Sbjct: 59 AYVEVIRNTPFLIQLFFVFFGLPSLGVQLGEMQAACLAMALNLGAYSTEIIRAGIDATPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A ++ +TR Q RH++L + LSS+ + ++ ++V S I ++ A Sbjct: 119 GQYEAGASLAMTRLQVFRHVVLKPALKRIWPALSSQIVIVMLGSAVCSQIAAEDLTFAAN 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I S ++ +Y +YL+L Sbjct: 179 FIQSRNFRAFEVYLVTTGIYLVLA 202 >gi|229095293|ref|ZP_04226285.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-29] gi|229114242|ref|ZP_04243663.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock1-3] gi|228669262|gb|EEL24683.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock1-3] gi|228688152|gb|EEL42038.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-29] Length = 218 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ I +V R PL++ F+ ++ LP IG+ Sbjct: 25 SVIALIGSFILGVILAVMRIA-PIRILNWIGSAFVEFVRNIPLVLIAFIFYFALPVIGVT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT + + H++LPQ + Sbjct: 84 LNGFVAGTLTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTRAMYHVVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|317401749|gb|EFV82368.1| polar amino acid ABC transporter [Achromobacter xylosoxidans C54] Length = 222 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 82/143 (57%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TP L+QLF +F+GLP +G+ F A +++ LN AY +EIIR+ I + PKG Sbjct: 60 YVEVVRNTPFLIQLFFVFFGLPSLGVQFSEMQAACLAMALNLGAYSAEIIRAGIDATPKG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A ++ +TR Q RH++L + LSS+ + ++ ++V S I ++ A Sbjct: 120 QYEAGASLAMTRLQVFRHVVLKPALARIWPALSSQIVIVMLGSAVCSQIAAEDLTFAANF 179 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I S ++ +Y +YL+L Sbjct: 180 IQSRNFRAFEVYFVTTGIYLVLA 202 >gi|116254852|ref|YP_770688.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259500|emb|CAK10638.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 229 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 115/208 (55%), Gaps = 23/208 (11%) Query: 29 CISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYG----L 81 C+ VIS++ GF IA+ F + L+ Y FRGTPLL+QL++++YG L Sbjct: 22 CL-LVISVVFGFAIAIGLAFAQVSGGRLTRLLARSYCTFFRGTPLLIQLWLLYYGVGSLL 80 Query: 82 PHIG---------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 P + I+ + F +S TLN++AY +E++R +++++PKG+ +A A GL+ Sbjct: 81 PMVPGIRQSLFWPILREGFFFAAVSFTLNYAAYEAEVLRGALLAVPKGELEAGRAFGLSP 140 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPL 189 IR I LP+ I + ++ E + LK+T +A T+T+ +++ A ++ T Y+PL Sbjct: 141 WMLIRRIWLPRAIRIALPTIAGEIVMQLKATPLAFTVTVMDLYAVANKVRQDTLLVYEPL 200 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSV 217 ++ + YL LT+ + +E+ V Sbjct: 201 LV---VTLFYLALTAVIARVFRSLEAQV 225 >gi|302062405|ref|ZP_07253946.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] Length = 167 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 58/159 (36%), Positives = 95/159 (59%), Gaps = 2/159 (1%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + + P L A+ VTL + I+ + SL + A I +F ++ ++ YV + R TP Sbjct: 9 LSTLPAFL-KAVGVTLQVGLIAILTSLSVAIINAAIAMF-RVPVLHRLVPVYVELARNTP 66 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+QLF I++ LP +GI F + +I++T AY++EI+R+ I ++PK Q ++ +IG Sbjct: 67 LLIQLFFIYFALPTMGIRVSGFASAVIAMTFLGGAYLTEILRAGIEAVPKAQIESGLSIG 126 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 L+R Q +RH+ILPQ S L + F+ +LK T+V S Sbjct: 127 LSRWQLLRHVILPQAGILSLPALFANFVFLLKETTVVSA 165 >gi|293602701|ref|ZP_06685142.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292818892|gb|EFF77932.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 260 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 119/224 (53%), Gaps = 21/224 (9%) Query: 1 MKYEW-FNLIIDSFPQLLYA-------AIVVTLPIACISFVISLIIGFFIAVIRIFFSDT 52 M Y W +++ ++ P ++ + TL +A ++V SL++G ++ V+R S Sbjct: 1 MNYNWSWSVFLEMSPDGVHTFLETILIGVGWTLALALTAWVFSLLLGSWLGVMRTAQSR- 59 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIV-------FDSFVAIIISLTL 100 + +++ YV +FR PLLVQ+F+ ++ LP + G+ + FV ++ L Sbjct: 60 VKNVLGATYVELFRNVPLLVQMFLWYFVLPELLPHAWGLAMKQMPQPWGQFVPAVLCLGF 119 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 SA ++E +R+ I S+P+GQ+ A A+GLT Q R+IILP+ PL+SEF+ + Sbjct: 120 YGSARVAEQLRAGIQSLPRGQFQAGTALGLTEGQVYRYIILPEAFRIVLPPLTSEFMGTI 179 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 K +SVA TI + E+ A+ + ++ + +YLIL Sbjct: 180 KYSSVALTIGLLELTGQARSMQEFSFHIFEAFSAATVIYLILNG 223 >gi|229083652|ref|ZP_04215977.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-44] gi|228699670|gb|EEL52330.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-44] Length = 230 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 100/163 (61%), Gaps = 2/163 (1%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEI 109 ++ I++ I H Y+ + RGTPL+VQ+ ++++G+ I +V F A I+L ++ AYI+EI Sbjct: 44 NNKILNSIAHLYIAVIRGTPLIVQIMILYFGITSI-VVLSPFWAGAIALAIHNGAYITEI 102 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R SI S+ +GQ +A+ ++G++ +R IILPQ + S PL ++F+ LK +S+ + + Sbjct: 103 FRGSIQSVDRGQLEAARSLGMSYPLAMRRIILPQALRLSIPPLGNQFVIGLKDSSLVAYV 162 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQI 211 + E++ + I + ++ L Y ++ YL L F Y++ + Sbjct: 163 GMSELWGSGLSIAAGNFKQLETYIVVSAYYLALVLLFTYLVSL 205 >gi|66045740|ref|YP_235581.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63256447|gb|AAY37543.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] Length = 220 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 96/162 (59%), Gaps = 3/162 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + ++ YV + R TP+LV + +I++ LP +GI D + I++L+L AY++E+ R+ Sbjct: 53 LRIVASVYVTVVRNTPILVLILLIYFALPGLGIRLDKLASFIVTLSLYAGAYLTEVFRAG 112 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++SI KGQ +A AIGL Q +II+P + LS+ FIS+ K TS+A+ I +PE Sbjct: 113 LLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPE 172 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + A++I +Y+ + + +Y++ CY+I + + + Sbjct: 173 LTYYARKINVESYRVIETWLVTTALYVVA---CYVIALLLRT 211 >gi|157963212|ref|YP_001503246.1| polar amino acid ABC transporter inner membrane subunit [Shewanella pealeana ATCC 700345] gi|157848212|gb|ABV88711.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella pealeana ATCC 700345] Length = 226 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 1/161 (0%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 + YV I RGTP++VQL VI Y + + D A +I+ LN AYISEIIR+ I ++ Sbjct: 65 NIYVSIIRGTPVVVQL-VILYFIVLAALDVDKITAAVIAFGLNSGAYISEIIRAGIQAVD 123 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A+ ++GL+ QT++ +ILPQ I L +EFI +LK T+V I ++ + Sbjct: 124 KGQMEAARSLGLSHGQTMKEVILPQAIKNILPSLGNEFIVLLKETAVIGFIGGVDLMRAG 183 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + I S T++ + A +YL+LT + + E+ + Q Sbjct: 184 EIIRSRTFEDSVPLFTCALIYLLLTYIFTFMLSRFETRLKQ 224 >gi|90578869|ref|ZP_01234679.1| ABC-type arginine/histidine transport system, permease component [Vibrio angustum S14] gi|90439702|gb|EAS64883.1| ABC-type arginine/histidine transport system, permease component [Vibrio angustum S14] Length = 223 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/154 (38%), Positives = 88/154 (57%), Gaps = 10/154 (6%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSI 114 +F GTPLLVQ+F+I+YG + DSFV +++L LN +AY +++ + + Sbjct: 55 LFTGTPLLVQIFLIYYGPGQFEGIRDSFVWQWLSQPWFCAMLALALNTAAYSTQLFKGAF 114 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IPKGQW A A+G+ K T+ +LP I S S+E I + K TS+ASTITI +I Sbjct: 115 DAIPKGQWQACRALGMETKTTL-STLLPFAIRRSVPAYSNEVILVFKGTSLASTITIMDI 173 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 AQRI + TY L ++ +YL + + I Sbjct: 174 MGYAQRINAQTYDTLTVFAIAGAMYLTVNALLSI 207 >gi|91787284|ref|YP_548236.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91696509|gb|ABE43338.1| amino acid ABC transporter membrane protein 1, PAAT family [Polaromonas sp. JS666] Length = 218 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 98/184 (53%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L + +A +FVI+L G +AV F ++ ++ Y+ R P L LF Sbjct: 13 ILMGGAITAAEVALGAFVIALAGGMLLAVTVTFARFRLLKFVIAAYIEWMRNVPALAHLF 72 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 VI++GL +GI VA I+ L L +A + ++ + + I GQ +A+ ++G+T QT Sbjct: 73 VIYFGLAAVGIRLSPLVAAILGLGLVGAAVLCDVFVAGLKCIHAGQREAALSVGMTPGQT 132 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 + HI+LPQ + L + +LK TS+AS I PEI A+ +V++T++ +IY Sbjct: 133 LAHILLPQMFRVTWPSLGNYTSQLLKDTSIASAIAAPEIMFFARNLVTSTFETTLIYLAA 192 Query: 196 AFVY 199 +Y Sbjct: 193 MLLY 196 >gi|30260795|ref|NP_843172.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47777838|ref|YP_017269.2| amino acid ABC transporter permease [Bacillus anthracis str. 'Ames Ancestor'] gi|49183633|ref|YP_026885.1| amino acid ABC transporter permease [Bacillus anthracis str. Sterne] gi|52144670|ref|YP_082158.1| glutamine ABC transporter permease [Bacillus cereus E33L] gi|165872951|ref|ZP_02217574.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|167635148|ref|ZP_02393464.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|167640890|ref|ZP_02399148.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|170689011|ref|ZP_02880211.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|170708477|ref|ZP_02898919.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|177652812|ref|ZP_02935185.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|190568537|ref|ZP_03021443.1| amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|196041831|ref|ZP_03109120.1| amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] gi|227816489|ref|YP_002816498.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|228913330|ref|ZP_04076963.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228925829|ref|ZP_04088913.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229120291|ref|ZP_04249541.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus 95/8201] gi|229601249|ref|YP_002865239.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] gi|254684282|ref|ZP_05148142.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CNEVA-9066] gi|254722086|ref|ZP_05183875.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A1055] gi|254738746|ref|ZP_05196449.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Western North America USA6153] gi|254742042|ref|ZP_05199729.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Kruger B] gi|254754972|ref|ZP_05207006.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Vollum] gi|254762297|ref|ZP_05214141.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Australia 94] gi|30254244|gb|AAP24658.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47551543|gb|AAT29744.2| amino acid ABC transporter, permease protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49177560|gb|AAT52936.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Sterne] gi|51978139|gb|AAU19689.1| ABC transporter, permease; probable glutamine ABC transporter, permease [Bacillus cereus E33L] gi|164711305|gb|EDR16859.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|167511110|gb|EDR86498.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|167529407|gb|EDR92158.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|170126598|gb|EDS95483.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|170666996|gb|EDT17759.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|172081846|gb|EDT66915.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|190560331|gb|EDV14310.1| amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|196027325|gb|EDX65943.1| amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] gi|227003240|gb|ACP12983.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|228663101|gb|EEL18691.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus 95/8201] gi|228833844|gb|EEM79397.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228846239|gb|EEM91258.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229265657|gb|ACQ47294.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] Length = 218 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +A++RI I++ + +V R PL++ F+ ++ LP +GI Sbjct: 25 SVIALIGSFILGVVLAIMRIA-PIRILNWLGTAFVEFVRNIPLVLIAFIFYFALPVVGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + H++LPQ + Sbjct: 84 LNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQAMYHVVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|89895379|ref|YP_518866.1| hypothetical protein DSY2633 [Desulfitobacterium hafniense Y51] gi|89334827|dbj|BAE84422.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 262 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/188 (36%), Positives = 107/188 (56%), Gaps = 9/188 (4%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF----YVWIFRGTPLLVQLF 75 ++T+ IA S ++SLIIG F+A F+ L +H+ YV I RGTPLLVQ++ Sbjct: 62 GFLMTIIIAFFSLILSLIIGSFLA-----FAGKSRFLPLHYFSKAYVEIIRGTPLLVQIY 116 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 V FY + + + +V +I L++ AYI EIIR+ I SI Q + + ++G T Q Sbjct: 117 VFFYIIATAMHLSNRYVLGVIILSVFSGAYICEIIRAGIESIEASQIETARSLGFTSYQR 176 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 R+II+PQ PL+ + +S++K +S+ S I + E+ + Q + S T+ Y L Sbjct: 177 YRYIIIPQVFKRILPPLAGQLVSLIKDSSLLSVIAVSELTKNVQEVDSFTFATFENYIVL 236 Query: 196 AFVYLILT 203 A +Y+ILT Sbjct: 237 ALLYMILT 244 >gi|302186219|ref|ZP_07262892.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae 642] gi|330941852|gb|EGH44589.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] gi|330953423|gb|EGH53683.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] gi|330981318|gb|EGH79421.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 220 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 96/162 (59%), Gaps = 3/162 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + ++ YV + R TP+LV + +I++ LP +GI D + I++L+L AY++E+ R+ Sbjct: 53 LRIVASIYVTVVRNTPILVLILLIYFALPGLGIRLDKLASFIVTLSLYAGAYLTEVFRAG 112 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++SI KGQ +A AIGL Q +II+P + LS+ FIS+ K TS+A+ I +PE Sbjct: 113 LLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPE 172 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + A++I +Y+ + + +Y++ CY+I + + + Sbjct: 173 LTYYARKINVESYRVIETWLVTTALYVVA---CYVIALLLRT 211 >gi|257898670|ref|ZP_05678323.1| amino acid ABC transporter [Enterococcus faecium Com15] gi|293572583|ref|ZP_06683557.1| polar amino acid ABC transporter, inner membrane subunit [Enterococcus faecium E980] gi|257836582|gb|EEV61656.1| amino acid ABC transporter [Enterococcus faecium Com15] gi|291607366|gb|EFF36714.1| polar amino acid ABC transporter, inner membrane subunit [Enterococcus faecium E980] Length = 218 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 60/177 (33%), Positives = 102/177 (57%), Gaps = 7/177 (3%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W N+ + L + VT+ ++ S + S +IG VIR F + +S I+ + Sbjct: 7 FSWMNV------RFLLEGLKVTVEVSLFSIIFSFLIGGLTGVIR-FANIPFLSKILGIVI 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++ LP IGI + F + + +LT+ SA +SEI R+ + ++PKGQ Sbjct: 60 DIIRNLPLLLIIFFTYFALPQIGIQMNIFWSAVAALTIFESAMLSEIFRAGLNAVPKGQM 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +A + GLT +T+R I+LPQ + + S+ IS++K TS+A I++PE+ A+ Sbjct: 120 EAGLSTGLTYVETMRTIVLPQAFKSMIPAIVSQLISLIKDTSLAVIISLPELSHQAR 176 >gi|154508368|ref|ZP_02044010.1| hypothetical protein ACTODO_00865 [Actinomyces odontolyticus ATCC 17982] gi|153798002|gb|EDN80422.1| hypothetical protein ACTODO_00865 [Actinomyces odontolyticus ATCC 17982] Length = 225 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 101/168 (60%), Gaps = 4/168 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAV-IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + VT+ I+ +S V+SL++G F+ + +R + + +M Y+ R P LV LFV + Sbjct: 21 GLGVTVGISALSVVLSLVLGVFVGLGMRSRWRP--LRWLMQLYLEFVRIMPQLVLLFVAY 78 Query: 79 YGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 +GL + GI D A ++ TL A + +++R ++I+IP+ Q++++YA+GLT +QT+R Sbjct: 79 FGLTRVAGINLDGITASVLVFTLWGGAEMGDLVRGALIAIPRHQYESAYALGLTPRQTMR 138 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +ILPQT+ A P + ++K+TS+ I + E+ + Q+I+ Sbjct: 139 RVILPQTLRRLAPPAVNLITRMVKTTSLVVLIGVVEVLKVGQQIIDAN 186 >gi|145298732|ref|YP_001141573.1| ABC-type amino acid transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142851504|gb|ABO89825.1| ABC-type amino acid transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 265 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 111/184 (60%), Gaps = 6/184 (3%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EW + D +P L + +VTL +A +S +L++G + +R+ S + + Y+ Sbjct: 49 EWED--GDFYPGPLLSGFLVTLQVALLSLAGTLVVGCSVVSLRLLPS-RLGPWLAVTYLA 105 Query: 64 IFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + R TP LVQL+++++ L P +G+ ++SL+L A+ +E++R+ I +IP GQW Sbjct: 106 LVRTTPQLVQLYILYFLLGPMLGLA--PLACAVLSLSLYQGAFTAEVLRAGIQAIPSGQW 163 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ ++GL+R T+R +ILPQ + PL++E +S++K +++ S I I ++ + +V Sbjct: 164 EAARSLGLSRAITLRKVILPQLVRIVLPPLTNELVSLIKHSALVSVIAIFDLTNEGRTLV 223 Query: 183 STTY 186 + T+ Sbjct: 224 ADTF 227 >gi|27378208|ref|NP_769737.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27351355|dbj|BAC48362.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 264 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 108/206 (52%), Gaps = 13/206 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL +A + I+ IG + + R + I+ + YV IFR P+L Q+F+ ++ LP Sbjct: 26 TLALAFFGWWIAFAIGIVVGIGRTV-QNRAIAALARLYVEIFRNIPVLAQMFLWYFVLPE 84 Query: 84 IGIV------------FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 I V + SFV ++ L L +A I+E +R+ I ++P+GQ +A+ A+GLT Sbjct: 85 ILPVTLGNAIKQIPPPWGSFVPALLCLGLYTAARIAEQVRAGIEALPRGQTEAASALGLT 144 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 T RHII+PQ + L+SE + I K+TSVA TI + E+ A++I T+Q Sbjct: 145 AYLTYRHIIVPQALRLIVPSLTSEVMGIYKNTSVALTIGLMELTAQARQISEATFQTFTA 204 Query: 192 YCELAFVYLILTSFCYIIQIKIESSV 217 + +YL L Y I+ +V Sbjct: 205 FGAATLIYLALALIAYQGMALIDRAV 230 >gi|325293283|ref|YP_004279147.1| Inner membrane arginine ABC transporter permease protein [Agrobacterium sp. H13-3] gi|325061136|gb|ADY64827.1| Inner membrane arginine ABC transporter permease protein [Agrobacterium sp. H13-3] Length = 276 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 64/213 (30%), Positives = 120/213 (56%), Gaps = 16/213 (7%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++ T+ + S ++ ++ IA R+ + +IS + + YV++FR TPLL QLF+I+Y Sbjct: 65 GLITTITLVGSSIILGALLSVPIAFARMS-ENRVISALAYAYVYVFRSTPLLAQLFLIYY 123 Query: 80 GLPH-------IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 GL +G+ + +++ ++SLTLN +AY +EI+R +I S+P+GQ + + ++G Sbjct: 124 GLGSFRQGLETVGLWWFFREAWYCGLLSLTLNTAAYQAEILRGAIRSVPRGQIEGAASLG 183 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT--YQ 187 L++ T R +ILPQ + + P +E I ++K ++V S +T+ ++ + S T YQ Sbjct: 184 LSKFITFRKVILPQALIVALRPYGNEIILMIKGSAVVSIVTVFDLMGQTRYAFSRTFDYQ 243 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y A YL + + +E+ +T+H Sbjct: 244 A---YLWAAIFYLTIVETLRHVWAWVEARLTRH 273 >gi|126641442|ref|YP_001084426.1| ABC-type amino acid transport system [Acinetobacter baumannii ATCC 17978] Length = 198 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 46/135 (34%), Positives = 80/135 (59%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +++ I FY+ + R TPLL+QLF ++YGLP +GI D F +I LT +Y++E R+ Sbjct: 15 VLNRIAQFYIELSRNTPLLIQLFFLYYGLPKLGIKIDGFACGVIGLTFLGGSYMAEAFRA 74 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + S+ KGQ D++ +IGL Q R++I PQ + S + + + ++K +SV S I + Sbjct: 75 GLQSVAKGQIDSAKSIGLKPTQIFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVV 134 Query: 173 EIFQTAQRIVSTTYQ 187 E+ + ++ Y+ Sbjct: 135 ELLFVTKDLIGMDYK 149 >gi|330965315|gb|EGH65575.1| amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 220 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 105/185 (56%), Gaps = 6/185 (3%) Query: 34 ISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 IS+ IG I ++ F + ++ YV + R TP+LV + +I++ LP +GI D Sbjct: 30 ISIAIGCVIGLMNAFALLSRYRALRIVASIYVTVVRNTPILVLILLIYFALPGLGIRLDK 89 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 + +++L+L AY++E+ R+ ++SI KGQ +A AIGL Q +II+P + Sbjct: 90 LASFVVTLSLYAGAYLTEVFRAGLLSIHKGQREAGLAIGLGEWQVRAYIIVPVILRNVLP 149 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 LS+ FIS+ K TS+A+ I +PE+ A++I +Y+ + + +Y++ CY+I Sbjct: 150 ALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYRVIETWLVTTALYVVA---CYVIA 206 Query: 211 IKIES 215 + + + Sbjct: 207 LLLRT 211 >gi|257487795|ref|ZP_05641836.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331008516|gb|EGH88572.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 220 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 96/162 (59%), Gaps = 3/162 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + ++ YV + R TP+LV + +I++ LP +GI D + I++L+L AY++E+ R+ Sbjct: 53 LRVVASIYVTVVRNTPILVLILLIYFALPGLGIRLDKLASFIVTLSLYAGAYLTEVFRAG 112 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++SI KGQ +A AIGL Q +II+P + LS+ FIS+ K TS+A+ I +PE Sbjct: 113 LLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPE 172 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + A++I +Y+ + + +Y++ CY+I + + + Sbjct: 173 LTYYARKINVESYRVIETWLVTTALYVVA---CYVIAMLLRT 211 >gi|70732346|ref|YP_262102.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68346645|gb|AAY94251.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 229 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 117/218 (53%), Gaps = 25/218 (11%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + W I+ F L + +TL + +S + + + + R+ + +I M F Sbjct: 1 MDFSW----INGFSSELLRGLGITLKLLLLSGICGFALAVVVGLGRVS-RNPLIRAPMQF 55 Query: 61 YVWIFRGTPLLVQLFVIFYGL-------PHIGIVF------DSFVAIIISLTLNFSAYIS 107 Y+ +FRGTPLLVQ+++++YG+ P I F + F + ++LTL+ AY+ Sbjct: 56 YISVFRGTPLLVQIYILYYGVGSLFAAYPPIRGSFLWPYLREGFWYVALALTLSVGAYVG 115 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E++R + ++P+G+ +A+ A G+ T+R + LP+ + L E + +LK+T++AS Sbjct: 116 EVLRGGLRAVPRGELEAARAYGMGHWLTLRRVWLPRALELVRPTLVGECVLLLKATALAS 175 Query: 168 TITIPEIFQTAQRIVSTT---YQPL----IIYCELAFV 198 T+ + ++ A + + T Y+PL +IY LAFV Sbjct: 176 TVAVTDLLGAANLVRAQTLKVYEPLLAVALIYIVLAFV 213 >gi|295397439|ref|ZP_06807526.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] gi|294974340|gb|EFG50080.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] Length = 555 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 67/229 (29%), Positives = 112/229 (48%), Gaps = 16/229 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR-----------IFFSDTIISLIMH 59 D++ T+ IA S ++ +IG IA+ R +F + ++ Sbjct: 314 DTYGSQFLTGAGNTMFIALSSTIMGFVIGLLIAIYRSLIVRRDQKPVAYFFYKLFDFVIA 373 Query: 60 FYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y+ IFRGTP++VQ +IFYG + A ++ +++N AY++E+IR I S+ Sbjct: 374 AYIEIFRGTPMMVQAMMIFYGSRLFFNFQMSTMFAALLIVSINTGAYLAEVIRGGITSVD 433 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A+ AIG+ QT+ I+LPQ I + L +EF+ +K TSV + I + E+F Sbjct: 434 KGQTEAARAIGMNHYQTMTTIVLPQAIRSILPALGNEFVINIKDTSVLNVIAVTELFFVT 493 Query: 179 QRIVSTTYQPLIIYCELAFVYLIL----TSFCYIIQIKIESSVTQHTYS 223 + +TY + A +Y +L T I+ ++ T H Y Sbjct: 494 KSAAGSTYLTFQTFLITAIIYFVLTFTTTRVLNFIENRMAGKKTYHVYE 542 >gi|223039606|ref|ZP_03609893.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter rectus RM3267] gi|222879177|gb|EEF14271.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter rectus RM3267] Length = 236 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 116/199 (58%), Gaps = 6/199 (3%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + I + +GF +A ++ F + I+S ++ YV I RGTP+++QL + + + Sbjct: 42 VTLGLTIGGTAIGVTLGFILAFLK-FLNIKILSFLIDEYVDILRGTPIILQLLI--FSVV 98 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 D+F +I+L LN SAY++EI+RS I S+ KGQ +A+ A+GL ++R ++ P Sbjct: 99 IFATWSDNFYVALIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGLNYYVSMREVVFP 158 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL-IIYCELAFVYLI 201 Q L++EFIS+ K TSV I++ +I ++ + + Y P +I+ + + Y+ Sbjct: 159 QATKNILPALANEFISLFKETSVVGYISVIDITMQSKSLQAVFYSPEPVIFTGIVY-YVS 217 Query: 202 LTSFCYIIQIKIESSVTQH 220 + F ++++I +E + +H Sbjct: 218 VKFFTFLVKI-LERRLNRH 235 >gi|310766723|gb|ADP11673.1| Putative amino acid ABC transporter, permease protein [Erwinia sp. Ejp617] Length = 218 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 96/175 (54%), Gaps = 18/175 (10%) Query: 48 FFSDTIISL---------------IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV 92 FF T+++L I+ YV +F+GTPLL+QLF+ F+G+ GI + Sbjct: 28 FFGGTLVALPLVRLRLAGRLWPNRIIRAYVELFQGTPLLMQLFLAFFGVALFGIDLSPWT 87 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 A ++LT SA++ +I SI ++PKGQW+A +GL+ QT+ ++LPQ + + P Sbjct: 88 AAALALTCYTSAFLVDIWYGSIRALPKGQWEACRCLGLSTGQTLFRVVLPQALRIAIAPT 147 Query: 153 SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + ++K T++AS I E+ + + + TYQP ++ +A Y ++ CY Sbjct: 148 VGFAVQVVKGTALASIIGFIELTKAGTILNNVTYQPFKVFGLVALGYFLM---CY 199 >gi|298487227|ref|ZP_07005276.1| glutamine transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158251|gb|EFH99322.1| glutamine transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320324044|gb|EFW80127.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. B076] gi|330890818|gb|EGH23479.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] gi|330985342|gb|EGH83445.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] Length = 220 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 96/162 (59%), Gaps = 3/162 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + ++ YV + R TP+LV + +I++ LP +GI D + I++L+L AY++E+ R+ Sbjct: 53 LRIVASIYVTVVRNTPILVLILLIYFALPGLGIRLDKLASFIVTLSLYAGAYLTEVFRAG 112 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++SI KGQ +A AIGL Q +II+P + LS+ FIS+ K TS+A+ I +PE Sbjct: 113 LLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPE 172 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + A++I +Y+ + + +Y++ CY+I + + + Sbjct: 173 LTYYARKINVESYRVIETWLVTTALYVVA---CYVIAMLLRT 211 >gi|194016444|ref|ZP_03055058.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus pumilus ATCC 7061] gi|194011917|gb|EDW21485.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus pumilus ATCC 7061] Length = 214 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 71/197 (36%), Positives = 113/197 (57%), Gaps = 3/197 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + II++FP L+ + TL I ++ ++ IIG +A+ R+ I++ I +V R Sbjct: 2 DTIINAFPYLM-DGLQTTLYIFVVAIILGFIIGLIVALFRLS-PFKILNFIALVFVNAIR 59 Query: 67 GTPLLVQLFVIFYGLPHIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 GTP +VQLF I++GL + I D A II++ +N AY SEIIR+ I SI KGQ +A+ Sbjct: 60 GTPFIVQLFFIYFGLNTLEFISLDRVPAGIITVAINAGAYFSEIIRAGIQSIDKGQTEAA 119 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G T Q +R I+LPQ ++++ I LK TS+ S I I +I Q Q S T Sbjct: 120 RSLGFTGGQNMRFIVLPQAFRRMLPAITNQAIISLKDTSLLSIIGIADIMQRGQVQASAT 179 Query: 186 YQPLIIYCELAFVYLIL 202 + PL ++ + +Y ++ Sbjct: 180 FDPLNVWLIVGIIYFVI 196 >gi|158423695|ref|YP_001524987.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158330584|dbj|BAF88069.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 225 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 105/192 (54%), Gaps = 1/192 (0%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +T+ + ++ +S +G A++R +++ +V + RG P+LV LF I++ +P Sbjct: 28 LTIAVTTLALCLSTALGLVWALLRTS-GVPMLAAPTRVFVELVRGVPILVILFYIYFVMP 86 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 GI +F A +I L L +S YI E R+ I ++ +GQ +A+ +IG+ R +R +ILP Sbjct: 87 DFGIDLSAFQAGVIGLALTYSCYIGETFRAGIEAVDRGQVEAAKSIGMKRPLMMRRVILP 146 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q P + + +LK +S S I++ E+ + + S+T+ + I+ +A +YL L Sbjct: 147 QAFKIVLPPYGNNIVMLLKDSSQVSVISVAELTMQGKMLASSTFNNMTIFTLVALLYLCL 206 Query: 203 TSFCYIIQIKIE 214 T I+ ++E Sbjct: 207 TVPLNIVMRQLE 218 >gi|186473900|ref|YP_001861242.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184196232|gb|ACC74196.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 216 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 117/211 (55%), Gaps = 3/211 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 FP LL AA+ T+ I+ VI +G + R+ S+ + YV+ FRG P+ Sbjct: 9 QGFPLLLQAALA-TIGISLTGLVIGFFVGIGVCSARLS-SNFVAQRFGGAYVFFFRGVPM 66 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LVQL +++Y LP +GI VA I +++L ++YI+EI+R ++IP GQ +A+ +GL Sbjct: 67 LVQLLLVYYLLPFVGINVSPIVAAISAVSLCSASYIAEILRGGFMNIPPGQIEAARMLGL 126 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + +R I +PQ + L +E + ++K++S+ S + + EI +TAQ I ++TY+PL Sbjct: 127 SPLDMLRRIQVPQAFRMTLPSLVNEMVLLIKASSLISVVGVAEITRTAQNIAASTYRPLE 186 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y +Y ++ ++ E + HT Sbjct: 187 AYLAAGLIYFVICGALALVAHAAEHRL-MHT 216 >gi|298529735|ref|ZP_07017138.1| polar amino acid ABC transporter, inner membrane subunit [Desulfonatronospira thiodismutans ASO3-1] gi|298511171|gb|EFI35074.1| polar amino acid ABC transporter, inner membrane subunit [Desulfonatronospira thiodismutans ASO3-1] Length = 229 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 68/226 (30%), Positives = 125/226 (55%), Gaps = 16/226 (7%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF- 65 +II+S P+LL A V+TL I +S ++ ++ +AV+R+ + L M Y + F Sbjct: 2 EIIIESLPRLLGGA-VITLEITFLSVLLGFVLAVPLAVMRV---SRLRCLWMPVYAFTFY 57 Query: 66 -RGTPLLVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSI 114 RGTPLLVQ+F+I+YG + DS + +++LTLN +AY +EI R I Sbjct: 58 FRGTPLLVQIFLIYYGSGQFQVFLDSVGLWHFFKSPWFCSVLALTLNTAAYSAEIFRGGI 117 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +P+G+ +A+ A G++ R I++P+ + + ++E I +L+++S+ S IT+ +I Sbjct: 118 QGVPRGEVEAARACGMSGLLLYRRIVIPKALRIAWPAYTNEVIFLLQASSLVSIITVMDI 177 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 A+ I + ++ ++ A +YL+L I +IE+ + + Sbjct: 178 TGVAREISARSFAFYELFLAAAAIYLVLVYGILWIFKRIENRINAY 223 >gi|261406921|ref|YP_003243162.1| polar amino acid ABC transporter inner membrane subunit [Paenibacillus sp. Y412MC10] gi|261283384|gb|ACX65355.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. Y412MC10] Length = 236 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 110/200 (55%), Gaps = 14/200 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +AI TL I +S +IG A RI+ ++S I YV RGTP+L L + Sbjct: 15 LLSAIPTTLLITAVSVTAGFMIGLIAAFARIY-KVPVLSQIATAYVTFIRGTPMLTHLLL 73 Query: 77 IFYGLP--------HIGIVFDSF-VAII----ISLTLNFSAYISEIIRSSIISIPKGQWD 123 I++GLP +G F S + +I IS ++ AY+SE+IRS ++++ +GQ + Sbjct: 74 IYFGLPVLVDALSAQMGWGFKSSSIPMIWFAFISFSITAGAYMSEVIRSGLLAVNRGQLE 133 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG+T Q +R I+ PQ + S LS+ I +L +++A T+++ +I AQ + S Sbjct: 134 AAYSIGMTTWQALRRIVFPQALAVSLPNLSNSVIGMLHGSTLAFTVSVVDINAQAQIVAS 193 Query: 184 TTYQPLIIYCELAFVYLILT 203 T ++ Y A ++ LT Sbjct: 194 TNWKFFESYLAAAAIFWGLT 213 >gi|219666812|ref|YP_002457247.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC [Desulfitobacterium hafniense DCB-2] gi|219537072|gb|ACL18811.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Desulfitobacterium hafniense DCB-2] Length = 214 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 86/143 (60%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV FRGT LLVQLF I++ LP +GI A +++L LN AY SE++RS+I+++PKG Sbjct: 53 YVEAFRGTSLLVQLFWIYFALPILGISLPPLTAGVLTLGLNCGAYGSEVVRSAILAVPKG 112 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A+ + Q +R IILPQ + I +LKSTS+ S IT+ ++ A Sbjct: 113 QTEAGIALNFSPWQRMRRIILPQAFVMMLPGFGNLQIELLKSTSLVSLITLADLTYQASV 172 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + ++T + +IY L +Y ++ Sbjct: 173 LNASTMETTLIYSLLLVIYFLIA 195 >gi|324324461|gb|ADY19721.1| amino acid ABC transporter, permease protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 230 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 62/187 (33%), Positives = 108/187 (57%), Gaps = 3/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A IV + SLI F A RI ++ +++ I H Y+ + Sbjct: 2 FEIFMSTYPTLLKATIVTLQLTLTSLLLGSLIGLLF-AFFRIS-NNKVLNSIAHVYIAVI 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYSLAMRRIVLPQAFRQSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGN 178 Query: 186 YQPLIIY 192 +Q L Y Sbjct: 179 FQQLETY 185 >gi|118476113|ref|YP_893264.1| amino acid ABC transporter permease [Bacillus thuringiensis str. Al Hakam] gi|118415338|gb|ABK83757.1| amino acid ABC transporter membrane protein, PAAT family [Bacillus thuringiensis str. Al Hakam] Length = 233 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 63/188 (33%), Positives = 109/188 (57%), Gaps = 3/188 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A I+ + SLI F A RI ++ +++ I H Y+ I Sbjct: 5 FEIFMSTYPTLLKATIITLQLTLTSLLLGSLIGLLF-AFFRIS-NNKVLNSIAHVYIAII 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI SI +GQ +A+ Sbjct: 63 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSIDRGQLEAA 121 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I ++ Sbjct: 122 RSLGMPYPLAMRRIVLPQAFRQSLPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAASN 181 Query: 186 YQPLIIYC 193 +Q L Y Sbjct: 182 FQQLETYM 189 >gi|219669812|ref|YP_002460247.1| polar amino acid ABC transporter inner membrane subunit [Desulfitobacterium hafniense DCB-2] gi|219540072|gb|ACL21811.1| polar amino acid ABC transporter, inner membrane subunit [Desulfitobacterium hafniense DCB-2] Length = 262 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 68/188 (36%), Positives = 107/188 (56%), Gaps = 9/188 (4%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF----YVWIFRGTPLLVQLF 75 ++T+ IA S ++SLIIG F+A F+ L +H+ YV I RGTPLLVQ++ Sbjct: 62 GFLMTIIIAFFSLILSLIIGSFLA-----FAGKSRFLPLHYFSKAYVEIIRGTPLLVQIY 116 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 V FY + + + +V +I L++ AYI EIIR+ I SI Q + + ++G T Q Sbjct: 117 VFFYIIATAMHLSNRYVLGVIILSVFSGAYICEIIRAGIESIEASQIETARSLGFTSYQR 176 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 R+II+PQ PL+ + +S++K +S+ S I + E+ + Q + S T+ Y L Sbjct: 177 YRYIIIPQVFKRILPPLAGQLVSLIKDSSLLSVIAVSELTKNVQEVDSFTFATFENYIVL 236 Query: 196 AFVYLILT 203 A +Y+ILT Sbjct: 237 ALLYMILT 244 >gi|330811272|ref|YP_004355734.1| ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379380|gb|AEA70730.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 232 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 92/163 (56%), Gaps = 9/163 (5%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTL 100 ++++ Y ++ RGTP+LVQLF+I+YGL IV +SF+ ++ + Sbjct: 47 KQPVVNMTAWLYTYVIRGTPMLVQLFLIYYGLAQFAIVRESFLWPWLSSATFCACLAFAI 106 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N SAY +EII S+ + P G+ +A+ A+G++R + R I+LP + + S+E I +L Sbjct: 107 NTSAYTAEIIAGSLRATPNGEIEAAKAMGMSRYKLYRRILLPSALRRALPQYSNEVIMML 166 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++TS+AS +T+ +I A+ + + Y P Y YL LT Sbjct: 167 QTTSLASIVTLIDITGAARTVNAQYYLPFEAYITAGVFYLCLT 209 >gi|294794720|ref|ZP_06759855.1| amino acid ABC transporter, permease protein [Veillonella sp. 3_1_44] gi|313894094|ref|ZP_07827660.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158 str. F0412] gi|294454082|gb|EFG22456.1| amino acid ABC transporter, permease protein [Veillonella sp. 3_1_44] gi|313441658|gb|EFR60084.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158 str. F0412] Length = 238 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 118/202 (58%), Gaps = 9/202 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 KY + +I +FPQLL + VT+ I IS ++ +I+G IA+IR+ + L + F Sbjct: 3 KYFDVSYMIQAFPQLL-NYVHVTVLITVISAILGVILGSIIAIIRLKKVPVLNQLFIVF- 60 Query: 62 VWIFRGTPLLVQLFVIFYGLP----HIGIVFDSFVAIIIS---LTLNFSAYISEIIRSSI 114 + RGTP LVQLF+I++G+P H+G+ + ++ TL+ +AY +EI+RSSI Sbjct: 61 ISFMRGTPFLVQLFLIYFGVPEIMSHMGLNMKNVPGLVFVYAVFTLHIAAYSAEIMRSSI 120 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ G+ +A+ ++G+T Q+ IILPQ T S PL++ I +LK T++ + + ++ Sbjct: 121 DAVAPGEKEAAKSLGMTEFQSYVRIILPQAFTMSIPPLTNLVIGMLKGTALIFNVGVVDM 180 Query: 175 FQTAQRIVSTTYQPLIIYCELA 196 + A + + + L ++ + A Sbjct: 181 MRKADLMGGNSQRYLELFVDAA 202 >gi|255322521|ref|ZP_05363666.1| ABC transporter, permease protein [Campylobacter showae RM3277] gi|255300429|gb|EET79701.1| ABC transporter, permease protein [Campylobacter showae RM3277] Length = 236 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 116/199 (58%), Gaps = 6/199 (3%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + I + +GF +A ++ F + I+S ++ YV I RGTP+++QL + + + Sbjct: 42 VTLGLTIGGTAIGVTLGFILAFLK-FLNIKILSFLIDEYVDILRGTPIILQLLI--FSVV 98 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 D+F +I+L LN SAY++EI+RS I S+ KGQ +A+ A+GL ++R ++ P Sbjct: 99 IFATWSDNFYVALIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGLNYYVSMREVVFP 158 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL-IIYCELAFVYLI 201 Q L++EFIS+ K TSV I++ +I ++ + + Y P +I+ + + Y+ Sbjct: 159 QATKNILPALANEFISLFKETSVVGYISVIDITMQSKSLQAVFYSPEPVIFTGIVY-YVS 217 Query: 202 LTSFCYIIQIKIESSVTQH 220 + F ++++I +E + +H Sbjct: 218 VKFFTFLVKI-LERRLNRH 235 >gi|47569425|ref|ZP_00240107.1| cystine transport system permease protein [Bacillus cereus G9241] gi|47553933|gb|EAL12302.1| cystine transport system permease protein [Bacillus cereus G9241] Length = 285 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 63/187 (33%), Positives = 108/187 (57%), Gaps = 3/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A IV + SLI F A RI ++ +++ I H Y+ I Sbjct: 57 FEIFMSTYPTLLKATIVTLQLTLTSLLLGSLIGLLF-AFFRIS-NNKVLNSIAHVYIAII 114 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 115 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAA 173 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 174 RSLGMPYPLAMRRIVLPQAFRQSIPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGN 233 Query: 186 YQPLIIY 192 +Q L Y Sbjct: 234 FQQLETY 240 >gi|299535497|ref|ZP_07048818.1| polar amino acid transport system permease protein [Lysinibacillus fusiformis ZC1] gi|298728697|gb|EFI69251.1| polar amino acid transport system permease protein [Lysinibacillus fusiformis ZC1] Length = 234 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 117/202 (57%), Gaps = 9/202 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 LI + P LL + +T I S + +++G +A+ ++ I+ ++ Y+ RG Sbjct: 9 LIAEVLPTLL-QYLPITFEILVFSILFGMMLGIVLAIPKLL-HIPILKQVITIYISFIRG 66 Query: 68 TPLLVQLFVIFYGLP------HIGIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 TP+LVQLF++FYG+P HI + D+ +II+ T + +A +EI R++I+++ +G Sbjct: 67 TPILVQLFLVFYGIPALLKLIHIDVTRMDAMYFVIITYTFSNAAAFAEIFRAAILTVDRG 126 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+Y++GL+ Q I+ PQ I + +++ IS LK TS+A +I + ++ + Sbjct: 127 QMEAAYSVGLSGSQAFMRIVFPQAIRVAFPNIANTMISSLKDTSLAFSIGVMDMVGRGET 186 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 ++++T + IY L+ VY ++ Sbjct: 187 LIASTTRAFEIYVALSIVYYVI 208 >gi|311278732|ref|YP_003940963.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] gi|308747927|gb|ADO47679.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] Length = 238 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 115/213 (53%), Gaps = 11/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S V+ ++ F+A+ R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLISSVVMGGVLALFLAIGRVS-SNKYIQFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I ++P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTELLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRAVPAGEVEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSSVKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P + A +YLI++ + K E QH Sbjct: 199 PFTAFGIAAVLYLIISYGLISLFRKAEKRWLQH 231 >gi|329296934|ref|ZP_08254270.1| polar amino acid ABC transporter inner membrane subunit [Plautia stali symbiont] Length = 218 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 53/147 (36%), Positives = 86/147 (58%), Gaps = 3/147 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y +F+GTPLL+QLF+ F+GL GI + A ++LTL SA++ +I SI ++PKG Sbjct: 56 YTELFQGTPLLMQLFLAFFGLGLFGIDVAPWTAASLALTLYTSAFLLDIWYGSIRALPKG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+AS +GL QT+ ++ PQ I + P + ++K T++AS I E+ + Sbjct: 116 QWEASRCLGLNFGQTLYRVVAPQAIRIAIAPTVGFAVQVIKGTALASIIGFVELTKAGTI 175 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCY 207 + + TYQP ++ +A Y ++ CY Sbjct: 176 LNNVTYQPFKVFGMVALGYFLM---CY 199 >gi|116671349|ref|YP_832282.1| polar amino acid ABC transporter inner membrane subunit [Arthrobacter sp. FB24] gi|116611458|gb|ABK04182.1| amino acid ABC transporter membrane protein 1, PAAT family [Arthrobacter sp. FB24] Length = 216 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 120/214 (56%), Gaps = 4/214 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++II++ P L + + TL ++ +S VI+L++G +A R+ + M YV I R Sbjct: 2 DVIIENLP-LYWEGFLRTLFLSAVSGVIALVLGTVLAAARVSPVAALRGFSMT-YVEILR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSF-VAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 TPL + F LP +G+ F+ F VA II+L+ +A+I+E +RS + S+P GQ +A+ Sbjct: 60 NTPLTIAFFFAAIVLPRLGVKFEQFEVAAIIALSAYTAAFIAEAVRSGVNSVPVGQAEAA 119 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IG+ Q + IILPQ + T PL + I+++K++SVA + E+F +++ + Sbjct: 120 RSIGMKFGQVLSLIILPQALRTVIPPLINILIALVKNSSVAGAFFVLELFGYGRQLANAN 179 Query: 186 YQP-LIIYCELAFVYLILTSFCYIIQIKIESSVT 218 L + +AF YL++T I+ +E V Sbjct: 180 GDAVLAVLLGVAFFYLLITVPLGILASTVERKVA 213 >gi|307308378|ref|ZP_07588083.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|306901179|gb|EFN31786.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 222 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 65/206 (31%), Positives = 115/206 (55%), Gaps = 3/206 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M+Y + F + ++P L AI TL ++ IS V L +G ++RI + ++ + Sbjct: 1 MQYSFDFAPVFAAWPMFLEGAIQ-TLRMSAISMVAGLALGIVFMLMRISRLGPVRTIAIG 59 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TP LVQ+F I++G+P +GI A I++++LN +AY +EI+R + SI Sbjct: 60 -YIELIRNTPFLVQVFFIYFGMPTLGIKLGGEEAAILAMSLNCAAYAAEIVRGGVQSIRP 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A A+GL R I+ I L S+FI ++ ++S+ ++++ E+ AQ Sbjct: 119 GQIEAGRALGLHTIDIYRFIVFRPAIRAVYPALCSQFILMMLNSSLVASVSAEELTYMAQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSF 205 + + T++ IY L +YL+L+ F Sbjct: 179 TLDAQTFRSFEIYFVLGAIYLLLSQF 204 >gi|227823543|ref|YP_002827516.1| putative amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] gi|227342545|gb|ACP26763.1| putative amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 221 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 2/196 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 II F + L + T+ + I V+ +GFFI + R S T++ I YV FRGT Sbjct: 7 IILRFQEALALGLWTTIKLTLICVVLGCSLGFFIGLARTSRS-TVLRAISSVYVEFFRGT 65 Query: 69 PLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 P+LVQLF IF+ LP I + + ++ +I+LTL A SE R+S+ SI Q DA A Sbjct: 66 PVLVQLFWIFFCLPLILDVELSNLISGVIALTLYMGAISSETFRASLKSIGPEQLDACVA 125 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL R+ + +ILPQ + + L S +S+ K +++ S + + ++ Q I + T + Sbjct: 126 LGLPRRVQVTSVILPQAVLRAIPTLLSNCVSLFKESALVSAVGMADLMFVGQNISNNTAR 185 Query: 188 PLIIYCELAFVYLILT 203 P+ + +A +Y ++ Sbjct: 186 PIEVLTVVALIYFLIA 201 >gi|70731861|ref|YP_261603.1| arginine/ornithine transport system permease aotM [Pseudomonas fluorescens Pf-5] gi|68346160|gb|AAY93766.1| arginine/ornithine transport system permease protein aotM [Pseudomonas fluorescens Pf-5] Length = 232 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 115/207 (55%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N+I ++ P L + ++ TL + +S L++ + ++R+ ++++ Y ++ Sbjct: 5 YNVIYEALP-LYFGGLLTTLKLLALSLFFGLLVALPLGLMRVS-KQPLVNMTAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +SF+ ++ +N SAY +EII S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFEAVRESFLWPWLSSATFCACLAFAINTSAYTAEIIAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G++R + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPNGEIEAAKAMGMSRYKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + Y P Y YL LT Sbjct: 183 AARTVNAQYYLPFEAYITAGVFYLCLT 209 >gi|23099528|ref|NP_692994.1| amino acid ABC transporter permease [Oceanobacillus iheyensis HTE831] gi|22777758|dbj|BAC14029.1| amino acid ABC transporter permease [Oceanobacillus iheyensis HTE831] Length = 185 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 56/142 (39%), Positives = 94/142 (66%), Gaps = 7/142 (4%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 +D F + L+ +T+ ++ +S I++ IG FIA+++I + I++ I Y+W+ RGTP Sbjct: 15 LDVFMEGLW----ITVKLSVVSLFIAIFIGLFIAILKIS-NIKILTWIADAYIWLVRGTP 69 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 L+VQ+F+++YGL I ++ + F A I L + AYI+EIIR +I S+ KGQ +A ++G Sbjct: 70 LIVQIFILYYGLTDIFLI-NQFWAGAIGLAFHSGAYIAEIIRGAIQSVDKGQREAGLSLG 128 Query: 130 LTRKQTIRHIILPQTITTSAVP 151 +++ +T+R IILPQ AVP Sbjct: 129 MSKGKTMRRIILPQAF-RRAVP 149 >gi|86358033|ref|YP_469925.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86282135|gb|ABC91198.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 276 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/217 (30%), Positives = 119/217 (54%), Gaps = 13/217 (5%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P+ L+ + VTL + IS V I+ +A+ R+ + ++ + Y++ FRGTPLL Q Sbjct: 60 PRYLHG-LWVTLSLVAISVVCGAILSLPLAMARLS-KNRALNWFAYGYIYFFRGTPLLAQ 117 Query: 74 LFVIFYGL----PH---IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 LF+++YGL P +GI + +++ ++++T+N +AY +EI+R +I S+P GQ + Sbjct: 118 LFLVYYGLGVFRPQLEAVGIWWFFREAWYCGLLAMTINTAAYQAEILRGAIESVPHGQRE 177 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+G+ R R IILPQ + P +E I ++K ++V + IT+ ++ + S Sbjct: 178 AAAALGIHRIIAFRKIILPQAFIVALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFS 237 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T+ Y A YL + + IE +T+H Sbjct: 238 RTFD-YQTYLWAAIFYLTIVEALRHLWAWIERRLTRH 273 >gi|325576796|ref|ZP_08147411.1| arginine ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus parainfluenzae ATCC 33392] gi|325161002|gb|EGC73120.1| arginine ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus parainfluenzae ATCC 33392] Length = 219 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 104/182 (57%), Gaps = 2/182 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++ I+ P+ ++A ++ TL +A ++SL+IG AVI + ++ L+ Y+ + Sbjct: 3 WDYILSVTPRFIHATLM-TLHLAFWGILLSLVIGVICAVITTYKVKSLTWLVKG-YIELS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL+Q+F +++GL IG+ D F II L +Y++E IR + ++ KGQ +++ Sbjct: 61 RNTPLLIQVFFLYFGLSKIGLKLDGFTCGIIGLAFLGGSYMAEAIRGGLEAVSKGQIESA 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IGLT Q R++I PQ + + + + ++K TSV S + + E+ A+ ++ Sbjct: 121 LSIGLTPFQAFRYVIFPQAFAIATPAIGANCLFLMKETSVISAVAVAELMFVAKEVIGLD 180 Query: 186 YQ 187 Y+ Sbjct: 181 YK 182 >gi|295699312|ref|YP_003607205.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1002] gi|295438525|gb|ADG17694.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 216 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 115/212 (54%), Gaps = 3/212 (1%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + P LL+AA T+ I+ VI +G + R+ L YV+ FRG P Sbjct: 8 VQGLPLLLHAAFA-TVGISLTGLVIGFFVGIGVCSARLS-QHRAARLAGGAYVFFFRGVP 65 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +LVQL +++Y LP GI VA I +++L ++YI+EI+R +SIP G +A+ +G Sbjct: 66 MLVQLLLVYYLLPFAGINVSPIVAAISAVSLCSASYIAEILRGGFLSIPPGHLEAARMLG 125 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+ T+R I++PQ + L +E + ++K++S+ S + + E+ +TAQ I ++TY+PL Sbjct: 126 LSPLDTLRRILVPQAFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNIAASTYRPL 185 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y +Y ++ ++ E + QH Sbjct: 186 EAYVAAGLIYFVICGSLALVAHAAEHRL-QHA 216 >gi|294628576|ref|ZP_06707136.1| amino acid ABC transporter, permease [Streptomyces sp. e14] gi|292831909|gb|EFF90258.1| amino acid ABC transporter, permease [Streptomyces sp. e14] Length = 286 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 114/215 (53%), Gaps = 21/215 (9%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + + + +G +AV R+ ++ ++ + YVW+FR P+LVQL + F Sbjct: 77 LTLWLTAVVMALGFALGTLLAVFRLS-ANPVLRAVSWGYVWLFRSIPILVQLLLWF---- 131 Query: 83 HIGIVFDSFVAI------------IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 +IG ++ + + II LTL+ +AY +E++R I+S+ +GQ +A+ A+GL Sbjct: 132 NIGALYPRVLGVQTVDLFGPVTVAIIGLTLHEAAYAAEVVRGGILSVDRGQIEAAQALGL 191 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--P 188 +R + R I+LPQ + + P + I LK TS+ S I + ++ + Q I TYQ P Sbjct: 192 SRWRRWRRIVLPQAMRSIVPPAGNMLIGTLKGTSIVSVIAVQDLLYSTQLIYHQTYQVIP 251 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 L++ L Y ++TS + Q +E + + S Sbjct: 252 LLMVATLW--YTVVTSVLSLGQHYVERHYARGSES 284 >gi|260461091|ref|ZP_05809340.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259033125|gb|EEW34387.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 218 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 87/143 (60%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TP LVQLF IF+GLP +GI D +A ++++TLN +AY EI+ + + ++P G Sbjct: 56 YVEVMRNTPFLVQLFFIFFGLPSLGIRLDPILAAMLAMTLNMAAYTIEIVGAGLDAVPGG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+GL +Q I+LPQ + L+S+ + ++ ++V S I + E+ A Sbjct: 116 QTEAALALGLRPRQVFIKIVLPQALKIIYPALTSQIVIMMLESAVVSQIAVRELTYEADM 175 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + + T++ Y + VYL+L+ Sbjct: 176 LQARTFRSFETYFVVTLVYLLLS 198 >gi|89893485|ref|YP_516972.1| hypothetical protein DSY0739 [Desulfitobacterium hafniense Y51] gi|89332933|dbj|BAE82528.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 217 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 56/141 (39%), Positives = 85/141 (60%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV FRGT LLVQLF I++ LP +GI A +++L LN AY SE++RS+I+++PKG Sbjct: 56 YVEAFRGTSLLVQLFWIYFALPILGISLPPLTAGVLTLGLNCGAYGSEVVRSAILAVPKG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A+ + Q +R IILPQ + I +LKSTS+ S IT+ ++ A Sbjct: 116 QTEAGIALNFSPWQRMRRIILPQAFVMMLPGFGNLQIELLKSTSLVSLITLADLTYQASV 175 Query: 181 IVSTTYQPLIIYCELAFVYLI 201 + ++T + +IY L +Y + Sbjct: 176 LNASTMETTLIYSLLLVIYFL 196 >gi|312962619|ref|ZP_07777109.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311283199|gb|EFQ61790.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 232 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 113/207 (54%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N+I +S P L ++ TL + IS L+ + ++R+ I++ Y ++ Sbjct: 5 YNVIWESMP-LYLDGLLTTLKLLAISLFFGLLAALPLGLMRVS-KQPIVNGAAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS---------LTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +SF+ ++S +N SAY +EII S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFEAVRESFLWPLLSSATFCACLAFAINTSAYTAEIIAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G++R + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPNGEIEAAKAMGMSRYKLYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + Y P Y YL LT Sbjct: 183 AARTVNAQFYLPFEAYITAGAFYLCLT 209 >gi|304395378|ref|ZP_07377261.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304356672|gb|EFM21036.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 222 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 62/191 (32%), Positives = 104/191 (54%), Gaps = 2/191 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 +P+LL + + VTL + ++ + +G A +R + +S + YV + R TP +V Sbjct: 14 WPELL-SGLWVTLQLTVLATTGGVALGIAGAALR-SGKPSWMSRLWGIYVELIRNTPFVV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I +GLP +G+ + A ++++ +N AY +EIIR+ I PKGQW+A +GLTR Sbjct: 72 QLFFIVFGLPALGLKLTAGEAALLAMLINLGAYSTEIIRAGIQVTPKGQWEAGRVLGLTR 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT ++LP + L S+ I ++ +SV S ++ E+ A I S T+ +Y Sbjct: 132 SQTFLRVVLPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFAANLIQSRTFLSFEVY 191 Query: 193 CELAFVYLILT 203 +YL L+ Sbjct: 192 LVTTLIYLALS 202 >gi|228931858|ref|ZP_04094754.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827838|gb|EEM73576.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 233 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 108/187 (57%), Gaps = 3/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A IV + SLI F A RI ++ +++ I H Y+ I Sbjct: 5 FEIFMSTYPTLLKATIVTLQLTLTSLLLGSLIGLLF-AFFRIS-NNKVLNSIAHVYIAII 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI SI +GQ +A+ Sbjct: 63 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSIDRGQLEAA 121 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 122 RSLGMPYPLAMRRIVLPQAFRQSIPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGN 181 Query: 186 YQPLIIY 192 +Q L Y Sbjct: 182 FQQLDTY 188 >gi|210618017|ref|ZP_03291852.1| hypothetical protein CLONEX_04085 [Clostridium nexile DSM 1787] gi|210149010|gb|EEA80019.1| hypothetical protein CLONEX_04085 [Clostridium nexile DSM 1787] Length = 233 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 60/171 (35%), Positives = 99/171 (57%), Gaps = 5/171 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM----HFYVWIFRGTPLLVQLF 75 + VT+ I+ + +I + IG FIAV+++ S I I+ + Y + RGTP++VQL Sbjct: 27 GLKVTILISIFAILIGVAIGLFIAVVKVTVSKNIFVRILKWFCNVYTTVIRGTPVMVQLL 86 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +++ + + FV I +N AY++EIIR+ I SI +GQ +A ++G QT Sbjct: 87 IMYNMVFTARDTNEIFVGAI-CFGINSGAYVAEIIRAGIESIDRGQMEAGRSLGFNYIQT 145 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +R+II+PQ + L +EFI ++K TSVA I + ++ + AQ I ST + Sbjct: 146 MRYIIVPQAVKNILPALGNEFIVLIKETSVAGVIAVTDLTKAAQYIGSTDF 196 >gi|160937964|ref|ZP_02085322.1| hypothetical protein CLOBOL_02858 [Clostridium bolteae ATCC BAA-613] gi|158439190|gb|EDP16944.1| hypothetical protein CLOBOL_02858 [Clostridium bolteae ATCC BAA-613] Length = 267 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 12/196 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDT-----------IISLIMHFYVWIFRGTPLL 71 V+L IA + ++ IIGF + +++ S+ + LI++ YV FRGTP++ Sbjct: 26 VSLKIALVGTLVGCIIGFAVGIVQTIPSERGDNPVKRAVLWAVKLILNAYVEFFRGTPMM 85 Query: 72 VQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 Q I+YGL P +GI + A L++N AY++E +R I+SI GQ + + AIG+ Sbjct: 86 AQAMFIYYGLLPMLGINMSMWGAAYFILSINTGAYMAETVRGGILSIDPGQTEGAKAIGM 145 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T QT+ ++ILPQ + + + I +K + V S I + E+ + Y Sbjct: 146 THVQTMLYVILPQALRNIMPQIGNNLIINIKDSCVLSVIGVTELLYKTKAAAGALYMNFE 205 Query: 191 IYCELAFVYLILTSFC 206 Y +Y I+T C Sbjct: 206 AYTITMIIYFIMTFTC 221 >gi|308185788|ref|YP_003929919.1| ABC transport system, permease protein [Pantoea vagans C9-1] gi|308056298|gb|ADO08470.1| putative ABC transport system, permease protein [Pantoea vagans C9-1] Length = 219 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 63/197 (31%), Positives = 107/197 (54%), Gaps = 5/197 (2%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D LL AA TL ++ ++F+ ++ + +R+ + LI Y +F+GTPL Sbjct: 9 DILRNLLLAA-RWTLLLSLVAFIGGTLVTLPLLFMRLLQRKWLTRLIRG-YTALFQGTPL 66 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L+QLF+ F+G+ GI + A ++LT SA++ +I SI ++PKGQW+AS +GL Sbjct: 67 LMQLFLAFFGVGLFGIDVAPWTAASLALTFYTSAFLVDIWYGSIRALPKGQWEASRCLGL 126 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T QT+ ++ PQ I P + ++K T++AS I E+ + + + TYQP Sbjct: 127 TFGQTLWRVVAPQAIRIGIAPTVGFAVQVIKGTALASIIGFIELTKAGTILNNVTYQPFK 186 Query: 191 IYCELAFVYLILTSFCY 207 ++ +A Y ++ CY Sbjct: 187 VFGLVALGYFLM---CY 200 >gi|301052295|ref|YP_003790506.1| ABC transporter permease [Bacillus anthracis CI] gi|300374464|gb|ADK03368.1| ABC transporter, permease; probable glutamine ABC transporter, permease [Bacillus cereus biovar anthracis str. CI] Length = 218 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +A++RI I++ + +V R PL++ F+ ++ LP +GI Sbjct: 25 SVIALIGSFILGVVLAIMRIA-PIRILNWLGTAFVEFVRNIPLVLIAFIFYFALPVVGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + H++LPQ + Sbjct: 84 LNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQAMYHVVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|148257735|ref|YP_001242320.1| ABC transporter permease/ATP-binding protein [Bradyrhizobium sp. BTAi1] gi|146409908|gb|ABQ38414.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Bradyrhizobium sp. BTAi1] Length = 536 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 55/162 (33%), Positives = 96/162 (59%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +++ I Y IFRGTPL++Q+ + LPHIGI + +A ++L N + +I+E++RS Sbjct: 48 LLAAIARGYTVIFRGTPLILQMVFAYDALPHIGIKLPAVLAAGLALACNEAPFIAEMLRS 107 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 ++ + +GQ A A+G+T +R II PQ I T +E +S LK++S+AS I + Sbjct: 108 GVLGVDRGQLLAGQALGMTPGVLMRRIIAPQAIRTMIPAFGNEAVSALKNSSLASVIAVQ 167 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 E+ + ++ S+T+ I+ +YL+LT +IQ+ +E Sbjct: 168 ELTLRSTQLASSTFDFFSIFFASGLIYLVLTGAISVIQLALE 209 >gi|317047033|ref|YP_004114681.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316948650|gb|ADU68125.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 218 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 53/151 (35%), Positives = 89/151 (58%), Gaps = 3/151 (1%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ Y +F+GTPLL+QLF+ F+G+ GI + A ++LTL SA++ +I SI + Sbjct: 52 VIRGYTELFQGTPLLMQLFLAFFGVALFGIDVAPWTAASLALTLYTSAFLVDIWYGSIRA 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +PKGQW+AS +GLT QT+ ++ PQ I + P + ++K T++AS I E+ + Sbjct: 112 LPKGQWEASRCLGLTFGQTLYRVVAPQAIRIAIAPTVGFAVQVVKGTALASIIGFVELTK 171 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + + TYQP ++ +A Y ++ CY Sbjct: 172 AGTILNNVTYQPFKVFGLVALGYFLM---CY 199 >gi|223039434|ref|ZP_03609722.1| ABC transporter membrane-spanning permease - glutamine transport [Campylobacter rectus RM3267] gi|222879230|gb|EEF14323.1| ABC transporter membrane-spanning permease - glutamine transport [Campylobacter rectus RM3267] Length = 217 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 105/186 (56%), Gaps = 5/186 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +E+ I F Q+ A + T+ ++ ++SLIIG F +++ F+ +++ +++ Sbjct: 1 MDFEF----IKEFTQMFVKAGIFTVKLSLYGILLSLIIGIFCTLVK-FYKIKVLTPVING 55 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLL+QLF ++YGL G+ +F + L +Y++E R ++ K Sbjct: 56 YIEVSRNTPLLIQLFFLYYGLSKFGLNLSAFTCAVTGLAFLGGSYMAESFRLGFEAVKKT 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++ LT+ Q +R++ILPQ + S +++ I ++K TSV S I +P++ + Sbjct: 116 QIEAALSVALTQGQILRYVILPQAFSVSIPSIAANVIFLIKETSVVSIIALPDLVYATKD 175 Query: 181 IVSTTY 186 I+ Y Sbjct: 176 IIGLYY 181 >gi|157161794|ref|YP_001459112.1| histidine ABC transporter, permease protein HisM [Escherichia coli HS] gi|157067474|gb|ABV06729.1| histidine ABC transporter, permease protein HisM [Escherichia coli HS] Length = 238 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 115/213 (53%), Gaps = 11/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + +S VI ++ F+A+ R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLILSVVIGGVLALFLAIGRVS-SNKYIQFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTEFLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A I + TYQ Sbjct: 139 YGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIACDINAATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P + A +YLI++ + + E QH Sbjct: 199 PFTAFGIAAVLYLIISYVLISLFRRAEKRWLQH 231 >gi|167750328|ref|ZP_02422455.1| hypothetical protein EUBSIR_01302 [Eubacterium siraeum DSM 15702] gi|167656688|gb|EDS00818.1| hypothetical protein EUBSIR_01302 [Eubacterium siraeum DSM 15702] gi|291556411|emb|CBL33528.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Eubacterium siraeum V10Sc8a] Length = 247 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 103/185 (55%), Gaps = 21/185 (11%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L ++ TL I + + S+ +G +A +++ I S + + Y+ I RGTPL++Q+ Sbjct: 24 ILLENLIPTLKIFGFTLLFSIPLGLIVAALKMCRFKPI-SWLTNLYILIMRGTPLMLQII 82 Query: 76 VIFYGLPHI-------GIVFDS-------------FVAIIISLTLNFSAYISEIIRSSII 115 V++Y LP + G +S F +II+ LN++AY +EI R I Sbjct: 83 VVYYALPFLKTATKGSGGFVESLLSGVDPAAESFMFTMVIIAFVLNYAAYFAEIFRGGIE 142 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SIP+GQ++A+ A+G+T+ QT IILPQ I S+E I+++K TS+A+ + EI Sbjct: 143 SIPRGQYEAAAALGMTKAQTFFRIILPQVIKRIVPASSNEVITLVKDTSLANVVAYSEIM 202 Query: 176 QTAQR 180 A++ Sbjct: 203 LAAKQ 207 >gi|307727665|ref|YP_003910878.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307588190|gb|ADN61587.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 216 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 119/213 (55%), Gaps = 8/213 (3%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFR 66 + P LL+AA+ T+ ++ + L+IGFF+AV + YV+ FR Sbjct: 8 VQGMPLLLHAALA-TIGVS----LTGLLIGFFVAVGVCAARLSHNRAARRFGGAYVFFFR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G P+LVQL +++Y LP +GI VA I +++L ++YI+EI+R +SIP G +A+ Sbjct: 63 GVPMLVQLLLVYYLLPFVGINVPPLVAAISAVSLCSASYIAEILRGGFLSIPPGHIEAAR 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +GL+ T+R I++PQ + L +E + ++K++S+ S + + E+ +TAQ I ++TY Sbjct: 123 MLGLSPFDTLRRILVPQAFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNIAASTY 182 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 +PL Y +Y ++ ++ E + Q Sbjct: 183 RPLEAYVAAGLIYFVICGALALVAHAAEYRLKQ 215 >gi|282849423|ref|ZP_06258808.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745] gi|282581127|gb|EFB86525.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745] Length = 238 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 118/202 (58%), Gaps = 9/202 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 KY + +I +FPQLL + VT+ I IS ++ +I+G IA+IR+ + L + F Sbjct: 3 KYFDVSYMIQAFPQLL-NYVHVTVLITVISAILGVILGSIIAIIRLKKVPVLNQLFIVF- 60 Query: 62 VWIFRGTPLLVQLFVIFYGLP----HIGIVFDSFVAIIIS---LTLNFSAYISEIIRSSI 114 + RGTP LVQLF+I++G+P H+G+ + ++ TL+ +AY +EI+RSSI Sbjct: 61 ISFMRGTPFLVQLFLIYFGVPEIMSHMGLNMKNVPGLVFVYAVFTLHIAAYSAEIMRSSI 120 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ G+ +A+ ++G+T Q+ IILPQ T S PL++ I +LK T++ + + ++ Sbjct: 121 DAVSPGEKEAAKSLGMTEFQSYVRIILPQAFTMSIPPLTNLVIGMLKGTALIFNVGVVDM 180 Query: 175 FQTAQRIVSTTYQPLIIYCELA 196 + A + + + L ++ + A Sbjct: 181 MRKADLMGGNSQRYLELFVDAA 202 >gi|260222556|emb|CBA32235.1| hypothetical protein Csp_D31120 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 191 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 51/119 (42%), Positives = 76/119 (63%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV +F+G PLLVQLF+ +YGL GI +VA + LTL SA+++EI R S+ SIP+G Sbjct: 56 YVQLFQGVPLLVQLFLAYYGLGLFGINTSPWVAAGMGLTLYASAFLTEIWRGSVESIPRG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 QW+AS ++ L + +R+IILPQ S P + ++K T++AS I E+ + A+ Sbjct: 116 QWEASQSLALNFAEQLRYIILPQAFKISVAPTVGFLVQVIKGTALASVIGFMELTKWAR 174 >gi|260583445|ref|ZP_05851193.1| glutamine ABC transporter glutamine-binding protein/permease [Granulicatella elegans ATCC 700633] gi|260158071|gb|EEW93139.1| glutamine ABC transporter glutamine-binding protein/permease [Granulicatella elegans ATCC 700633] Length = 479 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 64/192 (33%), Positives = 110/192 (57%), Gaps = 2/192 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I +S I+ IIG + ++R +++ I Y+ RG PL+V F I++G+P Sbjct: 286 TIWITFVSLAIATIIGVLLGLMRTS-RISVLETIATIYIDFMRGIPLIVLTFFIYFGIPQ 344 Query: 84 -IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + I D+ VA I +L LN +AYI+EI+R I +I KGQ +A+ ++GL ++++ IILP Sbjct: 345 ALNIRLDATVAAITTLGLNAAAYIAEIVRGGINAIDKGQSEAAMSLGLPYYKSMQKIILP 404 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q I ++F+ LK TS+ S I + E+ QT + I++ Q ++ + +YLI+ Sbjct: 405 QAIRLMVPSFINQFVITLKDTSILSIIGLVELTQTGKIIIARNLQSSSMWFIVGMMYLIV 464 Query: 203 TSFCYIIQIKIE 214 + I ++E Sbjct: 465 ITLLTKISARLE 476 >gi|260463586|ref|ZP_05811785.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Mesorhizobium opportunistum WSM2075] gi|259030677|gb|EEW31954.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Mesorhizobium opportunistum WSM2075] Length = 219 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 64/189 (33%), Positives = 114/189 (60%), Gaps = 8/189 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF--FSDTIISLIM 58 M ++W + ++ P L AAIV ++ I FV++ +G +AV+RI ++ IS+++ Sbjct: 1 MIWDW-SFTLEILPVLAQAAIV-SVEATLIGFVLAATLGLVLAVVRIAVPWTGWTISVLV 58 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 + R TPLL+Q+F I++ P G+V D+F A ++++ ++++AY SE+ R+ +I Sbjct: 59 E----LIRSTPLLIQIFFIYFVFPKFGLVLDAFTAGVLAIGIHYAAYCSEVYRAGFDNIH 114 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW+AS A+ L+ T R II+PQ I L + +++ K T + S I + E+ QTA Sbjct: 115 RGQWEASIALNLSAWTTFRDIIIPQAIPPIVPALGNYLVALFKETPLLSAIAVMELMQTA 174 Query: 179 QRIVSTTYQ 187 + I S T++ Sbjct: 175 KIIGSDTFR 183 >gi|170740013|ref|YP_001768668.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168194287|gb|ACA16234.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 216 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 55/158 (34%), Positives = 97/158 (61%), Gaps = 6/158 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ +F+GTPLL+QLF+ F+ +P I G+ D + A + L+L+ SA++ EI R +I ++P+ Sbjct: 55 YIKLFQGTPLLMQLFLAFF-VPGIFGLSIDPWGAAALGLSLHASAFLGEIWRGAIETVPR 113 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW A+ A+GL +I+PQ + + P + ++K+TS+AS I EI + AQ Sbjct: 114 GQWQAATALGLGYWNRTALVIVPQAVRIAVAPTIGFLVQLIKATSLASIIGFVEITRAAQ 173 Query: 180 RIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKI 213 I + T++P ++ +A VY + L+++ I+ K+ Sbjct: 174 VINNATFRPFTLFGLVALVYFVICWPLSAYSRRIERKL 211 >gi|126654465|ref|ZP_01726197.1| amino acid ABC transporter, permease protein [Bacillus sp. B14905] gi|126589071|gb|EAZ83288.1| amino acid ABC transporter, permease protein [Bacillus sp. B14905] Length = 218 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 56/155 (36%), Positives = 96/155 (61%), Gaps = 6/155 (3%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI-----VFDSFVAIIISLTLNFSAYISE 108 +S + H Y++I RGTPLL+QL +I +GLP + + V D FVA + LN++AY +E Sbjct: 48 LSWLAHTYIYIMRGTPLLLQLLLICFGLPMLPVIGEYLVLDRFVAACLGFILNYAAYFAE 107 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I R +++I KGQ++A+ +GL++ QT +ILPQ + LS+E ++++K T++ Sbjct: 108 IFRGGLLAIDKGQYEAAQVLGLSKWQTTTRVILPQMFRVALPALSNESVTLIKDTALLYA 167 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + +PE+ AQ V+ + + + A +YLI+T Sbjct: 168 VAVPELLHFAQTAVNRDFTIVPFFIAGA-IYLIMT 201 >gi|152995145|ref|YP_001339980.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas sp. MWYL1] gi|150836069|gb|ABR70045.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas sp. MWYL1] Length = 229 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 13/206 (6%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + F L VVTL +A S + LI+G A ++ S +I I + Y I RG P Sbjct: 4 LHGFGDQLLQGAVVTLELALSSLFVGLILGLLGASAKL-SSIAVIRWIANGYTTIIRGIP 62 Query: 70 LLVQLFVIFYG----LPHIGIVF--------DSFVAIIISLTLNFSAYISEIIRSSIISI 117 L+ + +I++G L I +F +F A + +L L F AY +E+ R ++ SI Sbjct: 63 ELLTVLIIYFGATSVLMAIAGLFGYDEYIEVGAFAAGVTALGLTFGAYATEVFRGALQSI 122 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKGQ +A+ A+G+ + IILPQ + L + F+ +LK T++ S + + +I + Sbjct: 123 PKGQHEAAIALGMGPIRKFYRIILPQVWRIALPGLGNLFLVLLKDTALVSVVGLDDIMRK 182 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 A VS+T Q + Y AF+YL LT Sbjct: 183 ANIAVSSTKQAFLFYLVAAFMYLALT 208 >gi|238792192|ref|ZP_04635827.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia intermedia ATCC 29909] gi|238728429|gb|EEQ19948.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia intermedia ATCC 29909] Length = 235 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 114/214 (53%), Gaps = 19/214 (8%) Query: 9 IIDSFPQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIF---FSDTIISLIMHFYVW 63 ++++ P LY + V L + F++S++ G +A++ F +S + + Sbjct: 1 MLEAAPTFLYSDGSDVTGLAMTAKLFLLSVVPGLLLALLMAVGQAFGPRPLSWFIRSITY 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIV--------------FDSFVAIIISLTLNFSAYISEI 109 FR TPL +QL +I+YGL IV D+ ++L LN SAY++E+ Sbjct: 61 FFRSTPLYLQLMLIYYGLSQFDIVQLGWQDDQPFWLLFRDATFCATLALVLNTSAYVAEL 120 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 + +++ P+ +W A A G+++ Q IR ++LP T+ L++E + +L +TS+AST+ Sbjct: 121 LAGMMVTFPRQEWVAGEAFGMSQWQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTV 180 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 T+ +I A+ + + TY P I + A +YL+ T Sbjct: 181 TLLDITGVARSLYAATYSPFIPFLMAAALYLLCT 214 >gi|224367456|ref|YP_002601619.1| amino acid transport system, permease protein (HisMQ-family protein) [Desulfobacterium autotrophicum HRM2] gi|223690172|gb|ACN13455.1| amino acid transport system, permease protein (HisMQ-family protein) [Desulfobacterium autotrophicum HRM2] Length = 225 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 68/197 (34%), Positives = 115/197 (58%), Gaps = 3/197 (1%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +I D+ P L+ ++ T I + I L++G +A + + + ++ FYVW F+G Sbjct: 7 VIKDALPFLIRGSLT-TGAIVLGAMFIGLVLGLTMAC-GMVYGRKWVRRVVGFYVWFFQG 64 Query: 68 TPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P+LV LF+ ++GL + +G+ F + VA+ + L + +AY + I R +++SIP GQ+ A+ Sbjct: 65 VPVLVLLFLFYFGLFNFMGLTFPAVVAVTLVLGMTTAAYQANIFRGAMLSIPSGQFKAAN 124 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G++ Q I +I+LPQ + S S+EF ILK +++A I PEI Q + S TY Sbjct: 125 ALGMSNVQAIVYIVLPQVLRISIPAWSNEFSIILKDSALAFVIGAPEIMARTQFVASRTY 184 Query: 187 QPLIIYCELAFVYLILT 203 Q L +Y +Y +LT Sbjct: 185 QHLPLYITAGLLYFVLT 201 >gi|294637082|ref|ZP_06715396.1| glutamine ABC transporter, permease protein [Edwardsiella tarda ATCC 23685] gi|291089710|gb|EFE22271.1| glutamine ABC transporter, permease protein [Edwardsiella tarda ATCC 23685] Length = 218 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 121/204 (59%), Gaps = 4/204 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + I D+ P LL A +TL I+ + + L+IG R F + + + Sbjct: 1 MQFDW-SAIWDAIPLLLEGA-KLTLWISVLGLLGGLVIGLAAGFARAF-GGWLSNHVALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 ++ + RGTP++VQ+ I++ LP + + D F A ++++ +N AYI+EI R +++SI Sbjct: 58 FIELIRGTPIVVQVMFIYFALPMMMPLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHS 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G +A A+GL+R+ T+R++I+P + PL +++I +K TS+ I + E+ + Q Sbjct: 118 GFREAGLALGLSRRDTLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I++ ++ + I+ +A +YLI+T Sbjct: 178 EIIAGNFRAMEIWSAVAVIYLIMT 201 >gi|289677305|ref|ZP_06498195.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. syringae FF5] gi|330981782|gb|EGH79885.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 232 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 115/207 (55%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N+I DS P L + ++ TL + IS L+ + ++R+ + +++ Y ++ Sbjct: 5 YNVIWDSLP-LYFGGLLTTLKLLAISLAFGLLAALPLGLMRVS-KNPWVNMPAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +SF+ ++ T+N SAY +EII S+ S Sbjct: 63 RGTPMLVQLFLIYYGLAQFDAVRESFLWPWLSSATFCACLAFTINTSAYTAEIIAGSLKS 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G+++ + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + Y P Y YL LT Sbjct: 183 AARTVNAQFYLPFEAYITAGVFYLCLT 209 >gi|238761694|ref|ZP_04622669.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia kristensenii ATCC 33638] gi|238700208|gb|EEP92950.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia kristensenii ATCC 33638] Length = 205 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 102/185 (55%), Gaps = 4/185 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFI-AVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A+ VTL I+ + VI GF + AV R + + YVW+ RGTP L QL V + Sbjct: 7 ALGVTLGISLSAAVIGACAGFILQAVCR---NSRWLFWPWRTYVWLIRGTPYLAQLAVFY 63 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 +GLP IG+ + A +ISL + SAY EI R++ SI GQ +A+ ++ ++ + Sbjct: 64 FGLPAIGVTLSAVEATVISLAIYSSAYFGEIFRTAWKSIGHGQLEAAQVHDISAWKSFWY 123 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 I PQ + S L ++FI +K ++VAS IT+PE+ T +IV+ TY ++ Y L Sbjct: 124 IQTPQALRFSLPLLGNQFILTIKESAVASIITVPELTMTTGQIVANTYTYIVPYTLLILS 183 Query: 199 YLILT 203 Y +L Sbjct: 184 YWLLA 188 >gi|207723709|ref|YP_002254107.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2] gi|206588913|emb|CAQ35875.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2] Length = 231 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 124/226 (54%), Gaps = 15/226 (6%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ + Q L + +++ ++ ++FV++L +G +A++R+ S + + I YV R Sbjct: 9 LLSGQYHQWLVSGFFLSIKLSVLAFVLALPLGIVVALLRMAPSAPLRA-IGQTYVEAIRN 67 Query: 68 TPLLVQLFVIFYGLPHI------GIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLL + ++G P + ++D + +I+L L +AY++E IRS + SIP Sbjct: 68 VPLLAHMLFWYFGAPQLLPNAVRTWLYDLNYEAASAVIALVLYTAAYMAEDIRSGLRSIP 127 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 K Q +AS A+GL+ Q +R +ILPQ++ + PL S+ +++ K++S+A I + E+ A Sbjct: 128 KEQLEASRALGLSFLQAMRRVILPQSLRVTVPPLVSQTLNLWKNSSIAMVIGVAELMYQA 187 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 Q++ S T++ + YL ++ I I + S+ QH Y V Sbjct: 188 QQVESATFRGFEAFAFATAAYLTIS-----IAITVFSAWYQHRYPV 228 >gi|196034602|ref|ZP_03102010.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus W] gi|228944164|ref|ZP_04106543.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195992645|gb|EDX56605.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus W] gi|228815553|gb|EEM61795.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 230 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 63/187 (33%), Positives = 108/187 (57%), Gaps = 3/187 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A IV + SLI F A RI ++ +++ I H Y+ I Sbjct: 2 FEIFMSTYPTLLKATIVTLQLTLTSLLLGSLIGLLF-AFFRIS-NNKVLNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYPLAMRRIVLPQAFRQSIPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGN 178 Query: 186 YQPLIIY 192 +Q L Y Sbjct: 179 FQQLDTY 185 >gi|152994477|ref|YP_001339312.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas sp. MWYL1] gi|150835401|gb|ABR69377.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas sp. MWYL1] Length = 506 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 128/219 (58%), Gaps = 16/219 (7%) Query: 1 MKYEW---FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII-SL 56 M ++W F+L SF +A+ V + ++ S+V+S+I+GF +A+ + S ++ + Sbjct: 1 MMFDWNYLFSLF--SFSDFWWASWTV-IKLSLASWVLSIIVGFVLALGKQ--SKLVVFNA 55 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIR 111 FY+W+FR PLLV L + Y +P + G++ D F A +I++ + SAY++EI R Sbjct: 56 PSKFYIWLFRSLPLLV-LLIFVYNMPQLFPSTGGLLSDPFWAGLIAMVMCESAYVAEIHR 114 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++SIPKGQ +A+ A+G+ I++PQ + + L++EFI+I+K +S+ S I++ Sbjct: 115 GGLLSIPKGQSEAARALGIRFAGAQWLIVIPQALRVALPSLTNEFIAIVKLSSLVSVISL 174 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVY-LILTSFCYII 209 E+ QR+ + + L +A Y LI+T F +++ Sbjct: 175 TEVLMVGQRLYTQNFLVLETMAAVAIYYVLIVTIFDFLL 213 >gi|331014304|gb|EGH94360.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 220 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 105/185 (56%), Gaps = 6/185 (3%) Query: 34 ISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 IS+ IG I ++ F + ++ YV + R TP+LV + +I++ LP +GI D Sbjct: 30 ISIAIGCVIGLMNAFALLSRYRALRIVASIYVTVVRNTPILVLILLIYFALPGLGIRLDK 89 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 + +++L+L AY++E+ R+ ++SI KGQ +A AIGL Q +II+P + Sbjct: 90 LASFVVTLSLYAGAYLTEVFRAGLLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLHNVLP 149 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 LS+ FIS+ K TS+A+ I +PE+ A++I +Y+ + + +Y++ CY+I Sbjct: 150 ALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYRVIETWLVTTALYVVA---CYVIA 206 Query: 211 IKIES 215 + + + Sbjct: 207 MLLRT 211 >gi|238753776|ref|ZP_04615137.1| Histidine transport system permease protein hisM [Yersinia ruckeri ATCC 29473] gi|238708012|gb|EEQ00369.1| Histidine transport system permease protein hisM [Yersinia ruckeri ATCC 29473] Length = 237 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/196 (34%), Positives = 109/196 (55%), Gaps = 11/196 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S V+ ++ +AV R+ + I L + F+ +IFRGTPL VQL V Sbjct: 19 FTGVAITLWLLISSVVMGGLLAIPLAVARVS-AHQAIRLPVWFFTYIFRGTPLYVQLLVF 77 Query: 78 FYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV S I++LTLN AY +EI +I ++P G+ +A+ A Sbjct: 78 YSGMYSLEIVRGSEFLNAFFRSGLNCTILALTLNTCAYTTEIFAGAIRAVPSGEVEAANA 137 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G +R + R IILP + + S+E I +L ST++A T T+P+I + A+ I + TYQ Sbjct: 138 YGFSRFKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDILKIARDINAATYQ 197 Query: 188 PLIIYCELAFVYLILT 203 P + A +YLI++ Sbjct: 198 PFYAFGIAAVLYLIIS 213 >gi|270263424|ref|ZP_06191693.1| transporter [Serratia odorifera 4Rx13] gi|270042308|gb|EFA15403.1| transporter [Serratia odorifera 4Rx13] Length = 218 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 89/149 (59%), Gaps = 3/149 (2%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 FY +F+GTPLL+QLF+ F+GL GI + A ++LTL SA++ +I SI ++P Sbjct: 54 RFYSELFQGTPLLMQLFLAFFGLALFGIDVSPWAAAALALTLFTSAFLVDIWSGSIAALP 113 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQW+AS +GL+ QT+ +I+PQ + + P + ++K T++AS I E+ + Sbjct: 114 KGQWEASRCLGLSFGQTLGRVIVPQAVRIAIAPTVGFSVQVIKGTALASIIGFIELTKAG 173 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + + TYQP ++ +A Y ++ CY Sbjct: 174 TMLNNVTYQPFKVFGLVALGYFLM---CY 199 >gi|260461733|ref|ZP_05809979.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|319785285|ref|YP_004144761.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|259032374|gb|EEW33639.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|317171173|gb|ADV14711.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 268 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 113/208 (54%), Gaps = 25/208 (12%) Query: 27 IACI-SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL---- 81 + C+ FV++L +G V + +SL + + RGTPLL+Q+++++YGL Sbjct: 64 VTCVFGFVLALPLGLAQVV-----GPSWLSLPAKAFCTVIRGTPLLLQIWLLYYGLGSLF 118 Query: 82 ---PHIG------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 P I +V ++ +++LTL+F+ Y+ E++R + +P GQ +A A G+ R Sbjct: 119 PQYPWIRESDIWPLVRQAWPYAVLALTLSFAGYVGEVMRGAFAGVPSGQLEAGRAFGMNR 178 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPL 189 + R + LPQ I + L+ E + LKST + +TIT+ +++ + R+ T Y+PL Sbjct: 179 WKLFRRVWLPQAIHKALPTLAGETVMQLKSTPLVATITVVDLYAVSARVRQDTLVIYEPL 238 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSV 217 ++ LA Y++LT I +IE+ + Sbjct: 239 LL---LALTYMVLTGLLVWIFSRIEARI 263 >gi|229177166|ref|ZP_04304555.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus 172560W] gi|228606347|gb|EEK63779.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus 172560W] Length = 218 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ I +V R PL++ F+ ++ LP IGI Sbjct: 25 SVIALIGSFILGVILAVMRIA-PVRILNWIGSAFVEFVRNIPLVLIAFIFYFALPVIGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + +++LPQ + Sbjct: 84 LNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYVQAMYYVVLPQAVKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|124027567|ref|YP_001012887.1| glutamate/aspartate transport system permease protein [Hyperthermus butylicus DSM 5456] gi|123978261|gb|ABM80542.1| glutamate/aspartate transport system permease protein [Hyperthermus butylicus DSM 5456] Length = 228 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 59/176 (33%), Positives = 99/176 (56%), Gaps = 7/176 (3%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 F I LI+G +A + ++ + L + RG PLLV +F++++GLP +G+ D Sbjct: 32 GFGIGLIVGPLLAFLEVYGPRPLARLAAAVE-EVIRGIPLLVIMFLVYFGLPELGVRLDP 90 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 A ++S+ + AY S+IIRS+I+SIP GQW+A+ A+G++ + ++I PQ + Sbjct: 91 LTAAVVSIGIRSLAYQSQIIRSAILSIPAGQWEAALALGMSPLEAFVNVIAPQAFRIAIP 150 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTA---QRIVSTTYQPLIIYCELAFVYLILT 203 L ++F LK TS+A I + EIF + +I+ PL+ + +Y ILT Sbjct: 151 GLVNQFTVDLKDTSIAYAIGVAEIFTQSVHVAQIILDYLSPLLF---VGLIYFILT 203 >gi|171185752|ref|YP_001794671.1| polar amino acid ABC transporter, inner membrane subunit [Thermoproteus neutrophilus V24Sta] gi|170934964|gb|ACB40225.1| polar amino acid ABC transporter, inner membrane subunit [Thermoproteus neutrophilus V24Sta] Length = 229 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 117/207 (56%), Gaps = 11/207 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I TL +A +SF I L++G + ++R+F + + YV FRGTPLLVQ+F+I++ Sbjct: 16 GIPTTLSLALLSFTIGLLLGAVLLLVRLFLPRPL-PWLASAYVEAFRGTPLLVQIFIIYF 74 Query: 80 G----LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 G L G+ D F A +I+L LN +AY +EI RS++ +IP Q+ + A T+ QT Sbjct: 75 GVGGYLKDYGLNIDPFTAGVIALGLNSAAYQAEIFRSAVQAIPLEQYLTAEAYAFTKTQT 134 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITI--PEIFQTAQRIVSTTYQPLIIYC 193 R+IILPQ + + L +E + ++K +S+ + I + P+IF+ A ++ + Y Sbjct: 135 FRYIILPQALRIALPALMNELVLLIKDSSLVAVIGVAPPDIFRRADYYAASKFTYFEAYL 194 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQH 220 A VY I+ CY + +KI + + Sbjct: 195 AAAVVYFII---CYAM-VKISHHIERK 217 >gi|317492512|ref|ZP_07950940.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919504|gb|EFV40835.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Enterobacteriaceae bacterium 9_2_54FAA] Length = 222 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 126/216 (58%), Gaps = 9/216 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M++EW + I D+FP LL A +TL I+ + + L+IG R + + + I Sbjct: 1 MQFEW-SAIWDAFPILLEGA-KLTLWISIVGLLGGLVIGLVAGFARAY-GGWLSNHIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVF-----DSFVAIIISLTLNFSAYISEIIRSSII 115 ++ + RGTP++VQ+ I++ LP + F D A ++++ +N AYI+EI R +++ Sbjct: 58 FIELIRGTPIVVQVMFIYFALPMMLQAFMQVRIDPLTAAVVTIMINSGAYIAEITRGAVL 117 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SI G +A A+GL+++ T+R++I+P + PL +++I +K TS+ I + E+ Sbjct: 118 SIHNGFREAGLALGLSKRDTLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELT 177 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQ 210 + Q I++ ++ + I+ +A +YLI+T + Y+++ Sbjct: 178 RQGQEIIAGNFRAMEIWSAVAVIYLIITLALSYVLR 213 >gi|218461591|ref|ZP_03501682.1| amino acid ABC transporter permease [Rhizobium etli Kim 5] Length = 276 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 67/217 (30%), Positives = 118/217 (54%), Gaps = 13/217 (5%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P+ L+ + VTL + IS V I+ +A+ R+ + ++ + Y++ FRGTPLL Q Sbjct: 60 PRYLHG-LWVTLSLVAISVVCGAILSLPLAMARLS-KNRALNWFAYCYIYFFRGTPLLAQ 117 Query: 74 LFVIFYGL----PH---IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 LF+++YGL P IGI + +++ + ++T+N +AY +EI+R +I S+P GQ + Sbjct: 118 LFLVYYGLGVFRPQLEAIGIWWFFREAWYCGLFAMTINTAAYQAEILRGAIESVPHGQHE 177 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+G+ + R IILPQ + P +E I ++K ++V + IT+ ++ + S Sbjct: 178 AAAALGIHKAIAFRKIILPQAFIVALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFS 237 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T+ Y A YL + + IE +T+H Sbjct: 238 RTFD-YQTYLWAAIFYLAIVEALRHLWAWIERRLTRH 273 >gi|218132831|ref|ZP_03461635.1| hypothetical protein BACPEC_00692 [Bacteroides pectinophilus ATCC 43243] gi|217991704|gb|EEC57708.1| hypothetical protein BACPEC_00692 [Bacteroides pectinophilus ATCC 43243] Length = 493 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + +L I ++ V SL +G I IR+ + I+ I Y+ I RGTPL++QL V Sbjct: 287 LSSGMAASLGIFVLTLVFSLPLGLLIMFIRMS-NLKILRAISKIYISIMRGTPLMLQLLV 345 Query: 77 IFYGLPH--IGIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +F+G P+ G+ F A+II +LN++AY +EI R+ I ++P GQ +A+ +G T Sbjct: 346 VFFG-PYYLFGVSLSYSYRFYAVIIGFSLNYAAYFAEIYRAGIEAVPAGQREAASVLGYT 404 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 QT I+ PQ + P+++E I+++K TS+A + E+F A+++ + Sbjct: 405 GVQTFTRIVFPQMVKRVLPPVTNEVITLVKDTSLAFALAYTEMFTLAKQVAAA 457 >gi|301344837|ref|ZP_07225578.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter baumannii AB056] gi|332851610|ref|ZP_08433559.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150] gi|332866498|ref|ZP_08437040.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113] gi|332729838|gb|EGJ61172.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150] gi|332734577|gb|EGJ65686.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113] Length = 211 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 104/175 (59%), Gaps = 2/175 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 PQ ++A + TL I+ IS ++++I+G +++ I + +++ I FY+ + R TPLL+ Sbjct: 2 LPQF-FSATLTTLKISIISIILAIIVGLICSIL-ITYRVRVLNRIAQFYIELSRNTPLLI 59 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF ++YGLP +GI D F +I LT +Y++E R+ + S+ KGQ D++ +IGL Sbjct: 60 QLFFLYYGLPKLGIKIDGFTCGVIGLTFLGGSYMAEAFRAGLQSVAKGQIDSAKSIGLQP 119 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 Q R++I PQ + S + + + ++K +SV S I + E+ + ++ Y+ Sbjct: 120 TQIFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKDLIGMDYK 174 >gi|288960751|ref|YP_003451091.1| polar amino acid transport system permease protein [Azospirillum sp. B510] gi|288913059|dbj|BAI74547.1| polar amino acid transport system permease protein [Azospirillum sp. B510] Length = 234 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 64/217 (29%), Positives = 116/217 (53%), Gaps = 8/217 (3%) Query: 6 FNLIIDSFPQLL--YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +L++ P LL + ++ C+ I +++GF + ++R + LI Y+ Sbjct: 4 LSLLVQYGPALLRGFGVTILCWGAGCL---IGMVLGFILMLLRQVPVRPLRWLI-RAYIE 59 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RGTP L+QLF+++ G P IG+ ++ A I+ L L SAY +EI R+ ++PKGQ + Sbjct: 60 VIRGTPFLIQLFLLYSGGPSIGLRLEATTAGILGLGLYGSAYFAEIFRAGYQAVPKGQVE 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL-KSTSVASTITIPEIFQTAQRIV 182 A+ ++GL+ +R +I+P + S +P ++IL K T V S IT+PE+ Q + Sbjct: 120 AALSLGLSHGAILRRVIVPAML-VSTIPAIVNMMAILTKETVVLSIITVPELMYEMQTMA 178 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + T+ +A Y +L + ++E+ VT+ Sbjct: 179 AETFATFETILGMALFYWLLVEVVSRLGRRLEARVTR 215 >gi|283786381|ref|YP_003366246.1| histidine ABC transporter permease [Citrobacter rodentium ICC168] gi|282949835|emb|CBG89458.1| histidine ABC transporter, permease protein [Citrobacter rodentium ICC168] Length = 235 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 116/216 (53%), Gaps = 11/216 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S V+ I+ F+A+ R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLISSVVMGGILAVFLAIGRVS-SNKFIQFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTDLLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 P + A +YL+++ + + E QH S Sbjct: 199 PFTAFGIAAVLYLMISYVLISLFRRAERRWLQHVSS 234 >gi|298294041|ref|YP_003695980.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296930552|gb|ADH91361.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 226 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 53/141 (37%), Positives = 83/141 (58%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 FYV R TPL++QL I+Y LP GI + A II LT+N+SA++SE+ RS I S+P Sbjct: 57 DFYVEFIRATPLILQLIYIYYVLPSAGIRLEPVTAAIIGLTINYSAFMSEVYRSGIQSVP 116 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 + Q++A+ ++GL+ T +I PQ L + I++ K T++AS +T+ E+ + Sbjct: 117 RSQYEAAQSLGLSPTITFVKVIFPQAFRVVLPALGNYLIALFKDTALASVVTVQELMFSG 176 Query: 179 QRIVSTTYQPLIIYCELAFVY 199 Q I + YQ +Y A +Y Sbjct: 177 QIIAARNYQYFTVYTVTAILY 197 >gi|260770436|ref|ZP_05879369.1| ABC polar amino acid transporter inner membrane protein [Vibrio furnissii CIP 102972] gi|260615774|gb|EEX40960.1| ABC polar amino acid transporter inner membrane protein [Vibrio furnissii CIP 102972] Length = 222 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 108/204 (52%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y+ F+ + PQ + A + T+ + IS V L++G A + + + Sbjct: 1 MSYQLDFSGLTPYLPQFV-AGLGTTVELTIISTVGGLLLGTLCAGAKTS-QAKWLKFVCT 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TP +VQLF IF+GLP +GI ++ A +I++ +N AY +EIIR+ I + PK Sbjct: 59 CYIEVIRNTPFIVQLFFIFFGLPALGIKLSAWQAGVIAMVINLGAYSAEIIRAGIEATPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A +GLTR Q I++P L S+ I ++ ++V S I++ ++ A Sbjct: 119 GQWEAGKTLGLTRMQIFTRIVIPPAYQRVYPALVSQCIIVMLGSAVVSQISVEDLTFAAN 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 + S ++ Y A +YL+L Sbjct: 179 FVQSRSFLSFESYMLTAAIYLVLA 202 >gi|150019161|ref|YP_001311415.1| polar amino acid ABC transporter inner membrane subunit [Clostridium beijerinckii NCIMB 8052] gi|149905626|gb|ABR36459.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium beijerinckii NCIMB 8052] Length = 235 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 108/199 (54%), Gaps = 13/199 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L A + V + F +++I+G FIA+ RI + ++ F +I RGTPLLVQL Sbjct: 20 LKAGLWVVVQATVFGFFLAIILGLFIAIGRISKIKILRGFLLVFLEFI-RGTPLLVQLVY 78 Query: 77 IFYGLPHI----------GIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 ++Y +P + G F S VA I L +N+ YISE+IRSSI+SI GQ +A Sbjct: 79 MYYVVPLLVSIIVQIWNPGYQFKISSLVAGTIGLGINYGCYISEVIRSSILSIDGGQTEA 138 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+GLT QT+ II+PQ + + + +LK TS+ + +++ E+ Q S Sbjct: 139 ALALGLTNNQTMFRIIIPQALRNVIPVFGNYLVMMLKDTSLLAYVSVSELLLRTQSYASQ 198 Query: 185 TYQPLIIYCELAFVYLILT 203 ++ + Y LA YLIL+ Sbjct: 199 SFLTIESYTILAGFYLILS 217 >gi|94309345|ref|YP_582555.1| amino acid ABC transporter permease [Cupriavidus metallidurans CH34] gi|93353197|gb|ABF07286.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 242 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 61/188 (32%), Positives = 105/188 (55%), Gaps = 11/188 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +++ + + + VT+ + S++I+L IG + V+R + +S I YV IFR PL Sbjct: 18 ETYLDWMISGLKVTIALGLSSWIIALAIGSVLGVLRTV-PNKWLSGIAATYVEIFRNIPL 76 Query: 71 LVQLFVIFYGLP----------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 LVQLF+ ++ P + F+A ++ L +A + E +RS I S+P+G Sbjct: 77 LVQLFIWYFVGPELLPGGEAIKQMNPFTQQFLAAMLCLGTFTAARVCEQVRSGINSLPRG 136 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A+G T QT R+++LP PL+SEF++I K+++VASTI + E+ ++ Sbjct: 137 QKNAGLAMGFTLPQTYRYVLLPMAFRVIVPPLTSEFLNIFKNSAVASTIGLLELAAQGRQ 196 Query: 181 IVSTTYQP 188 +V T +P Sbjct: 197 LVDYTARP 204 >gi|315181507|gb|ADT88420.1| ABC polar amino acid transporter inner membrane protein [Vibrio furnissii NCTC 11218] Length = 222 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 108/204 (52%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y+ F+ + PQ + A + T+ + IS V L++G A + + + Sbjct: 1 MSYQLDFSGLTPYLPQFV-AGLGTTVELTIISTVGGLLLGTLCAGAKTS-QAKWLKFVCT 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TP +VQLF IF+GLP +GI ++ A +I++ +N AY +EIIR+ I + PK Sbjct: 59 CYIEVIRNTPFIVQLFFIFFGLPALGIKLSAWQAGVIAMVINLGAYSAEIIRAGIEATPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A +GLTR Q I++P L S+ I ++ ++V S I++ ++ A Sbjct: 119 GQWEAGKTLGLTRMQIFTRIVIPPAYQRVYPALVSQCIIVMLGSAVVSQISVEDLTFAAN 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 + S ++ Y A +YL+L Sbjct: 179 FVQSRSFLSFESYMLTAAIYLVLA 202 >gi|295099959|emb|CBK89048.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Eubacterium cylindroides T2-87] Length = 242 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 117/219 (53%), Gaps = 14/219 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIR-IFFSD----------TIISLIMHFYVWIFRGT 68 I TL A I ++ +IG + IR I +D I I FY+W+FRGT Sbjct: 22 GIGNTLLFALIGTLVGFLIGLLVGGIRAIEINDYDSTPVKAIKNIGRWITSFYIWVFRGT 81 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P++VQ ++Y L + + + FVA ++ +++N AY++EIIR+ I S+ GQ +A+ ++ Sbjct: 82 PMMVQAMFVYYLLRPV-LQWTPFVAGLVIISINTGAYMAEIIRAGIQSVDNGQNEAAKSL 140 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+T QT+ I+ PQ I + + ++ I +K +S+ + I + E++ + + YQ Sbjct: 141 GMTTIQTLIFIVFPQAIKNTFPSIGNQLIVNIKDSSMLNVIGVTELYFQTTSVAGSNYQY 200 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQH--TYSVD 225 + + A +YL+LT+ + +E + + T S+D Sbjct: 201 IETFLVSALIYLVLTTLASFLLNFLEGRLDEERKTKSMD 239 >gi|186472703|ref|YP_001860045.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Burkholderia phymatum STM815] gi|184195035|gb|ACC72999.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Burkholderia phymatum STM815] Length = 219 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 99/175 (56%), Gaps = 2/175 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P L A+ V T+ I + F I+L++G A++R + S + F V R TPLL+ Sbjct: 14 LPDLARAS-VYTILITLVGFSIALVLGLVFAILRRSHIKPV-SRTVGFVVEFIRSTPLLI 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 Q++V+FY LP G+ + A I + L+++ Y SE+ R+ + + +GQW+A+ A+ L+ Sbjct: 72 QVYVLFYVLPIYGVTMSALTAGTIGIALHYACYTSEVYRAGLNGVARGQWEAACALSLSP 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +T +ILPQ + L + +++ K T V S IT+ E+ Q A+ + S T++ Sbjct: 132 WRTYSGVILPQAVRPVIPALGNYLVAMFKDTPVLSAITVVELMQQAKNVGSETFR 186 >gi|206968581|ref|ZP_03229537.1| amino acid ABC transporter, permease protein [Bacillus cereus AH1134] gi|228919495|ref|ZP_04082859.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228951132|ref|ZP_04113248.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229068326|ref|ZP_04201629.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus F65185] gi|229077954|ref|ZP_04210563.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock4-2] gi|229108250|ref|ZP_04237872.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock1-15] gi|229143368|ref|ZP_04271799.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST24] gi|206737501|gb|EDZ54648.1| amino acid ABC transporter, permease protein [Bacillus cereus AH1134] gi|228640175|gb|EEK96574.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST24] gi|228675266|gb|EEL30488.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock1-15] gi|228705292|gb|EEL57669.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock4-2] gi|228714787|gb|EEL66659.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus F65185] gi|228808542|gb|EEM55045.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228840138|gb|EEM85415.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 218 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ I +V R PL++ F+ ++ LP IGI Sbjct: 25 SVIALIGSFILGVILAVMRIA-PIRILNWIGSAFVEFVRNIPLVLIAFIFYFALPVIGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + +++LPQ + Sbjct: 84 LNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYVQAMYYVVLPQAVKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|271501779|ref|YP_003334805.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270345334|gb|ACZ78099.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 218 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 52/151 (34%), Positives = 87/151 (57%), Gaps = 3/151 (1%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + Y +F+GTPLL+QLF+ F+GL GI + A ++LTL SA++ +I S+ + Sbjct: 52 LTRLYADVFQGTPLLMQLFLAFFGLGLFGIDVSPWTAASLALTLFTSAFLLDIWHGSVQA 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +PKGQW+A +GLT QT+ +I PQ + + P + ++K T++AS I ++ + Sbjct: 112 LPKGQWEACRCLGLTFTQTLTRVIAPQAMRIAIAPTVGFSVQVIKGTALASIIGFVDLTK 171 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + + TYQP ++ +A Y +L CY Sbjct: 172 AGTMLNNVTYQPFKVFGLVALGYFLL---CY 199 >gi|188534745|ref|YP_001908542.1| Putative amino acid ABC transporter, permease protein [Erwinia tasmaniensis Et1/99] gi|188029787|emb|CAO97666.1| Putative amino acid ABC transporter, permease protein [Erwinia tasmaniensis Et1/99] Length = 221 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 105/191 (54%), Gaps = 2/191 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 +P+L+ + + VT+ + + + +G A +R +++S YV + R TP +V Sbjct: 14 WPELV-SGLWVTIQLTVMVTTGGVALGILGAALR-SGRPSLLSRAWGVYVELIRNTPFVV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I +GLP++G+ + A ++++ +N AY +EIIR+ I PKGQW+A +GLTR Sbjct: 72 QLFFIVFGLPNLGLKLTAGEAALLAMLINLGAYSTEIIRAGIQVTPKGQWEAGRVLGLTR 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +QT ++LP + L S+ I ++ +SV S ++ E+ A I S T+ +Y Sbjct: 132 RQTFMRVVLPPALKRIYPALVSQCIIVMLGSSVVSQVSYEELTFAANLIQSRTFLSFEVY 191 Query: 193 CELAFVYLILT 203 +YL L+ Sbjct: 192 LVTTLMYLALS 202 >gi|158423550|ref|YP_001524842.1| glutamate/aspartate transport system permease protein 2 [Azorhizobium caulinodans ORS 571] gi|158330439|dbj|BAF87924.1| glutamate/aspartate transport system permease protein 2 [Azorhizobium caulinodans ORS 571] Length = 255 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 70/232 (30%), Positives = 120/232 (51%), Gaps = 22/232 (9%) Query: 1 MKYEW-----FNLIIDSFPQLLYA---AIVVTLPIACISFVISLIIGFFIAVIRIFFSDT 52 MKY+W +L D LY ++ TL + + +L+ G + V R + Sbjct: 1 MKYDWSWSVFLDLSSDGVHSYLYNLGLGVLWTLGLTGATAAGALVFGSILGVFRTTRAP- 59 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI----------GIV--FDSFVAIIISLTL 100 +++ I YV IFR PLLVQ+F+ ++ LP + G+ +++FV ++ LT Sbjct: 60 VLNAIGATYVEIFRNIPLLVQMFLWYFVLPEVLPKAIGQAIKGMPAPWNAFVPALLCLTF 119 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 SA I E +RS I S+P+GQ A+ A+GLT RH++LP+ PL+SEF++I+ Sbjct: 120 YGSARIGEQMRSGIQSLPRGQLQAALALGLTPVMAYRHVVLPEAFRLMIPPLTSEFMAIV 179 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIK 212 K +SVA TI + E+ A+ + ++ + YL++ C ++ ++ Sbjct: 180 KYSSVAMTIGLLELTGQARAMQEASFHIFEAFSAATVGYLVING-CIVLAMR 230 >gi|169796308|ref|YP_001714101.1| amino acid ABC transporter membrane protein [Acinetobacter baumannii AYE] gi|169149235|emb|CAM87117.1| putative amino acid transport protein (ABC superfamily, membrane) [Acinetobacter baumannii AYE] Length = 224 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 103/175 (58%), Gaps = 2/175 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 PQ ++A + TL I+ IS ++++I+G I I I + +++ I FY+ + R TPLL+ Sbjct: 15 LPQF-FSATLTTLKISIISIILAIIVGL-ICSILITYRVRVLNRIAQFYIELSRNTPLLI 72 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF ++YGLP +GI D F +I LT +Y++E R+ + S+ KGQ D++ +IGL Sbjct: 73 QLFFLYYGLPKLGIKIDGFTCGVIGLTFLGGSYMAEAFRAGLQSVAKGQIDSAKSIGLQP 132 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 Q R++I PQ + S + + + ++K +SV S I + E+ + ++ Y+ Sbjct: 133 TQIFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKDLIGMDYK 187 >gi|190150673|ref|YP_001969198.1| arginine transporter permease ArtQ [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264021|ref|ZP_07545621.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915804|gb|ACE62056.1| arginine transport system permease protein ArtQ [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870632|gb|EFN02376.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 223 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 115/211 (54%), Gaps = 8/211 (3%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L+Y+A ++TL +A S ++ L++ V+ IS ++ + RG P ++ + Sbjct: 8 LIYSATLMTLGLALTSLIVGLLLSMLFVVLETS-KQPCISKPTSVFLALLRGLPEILVVL 66 Query: 76 VIFYGLPHI-----G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +IF+G + G + F +F +++L+L FSAY S+ +R +I ++P GQW++S A+ Sbjct: 67 LIFFGSTELVEKITGEYVEFSAFSCGVLALSLIFSAYASQSLRGAIQAVPNGQWESSAAL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+R T II+PQ + LS++++ +LK T++ S I + ++ + I + +QP Sbjct: 127 GLSRAHTFLRIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLMRQTDLINTNEHQP 186 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 Y A +YL +T +I +E T+ Sbjct: 187 FTWYGLAALIYLAITLISQVIIAGLEKRFTR 217 >gi|299536214|ref|ZP_07049527.1| amino-acid ABC transporter permease protein [Lysinibacillus fusiformis ZC1] gi|298728200|gb|EFI68762.1| amino-acid ABC transporter permease protein [Lysinibacillus fusiformis ZC1] Length = 236 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 2/147 (1%) Query: 59 HFYVWIFRGTPLLVQLFVIFYG-LPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 Y+ +FRGTP+LVQ+ +I +P I G V+ I +L LN +AY +EI R+ I S Sbjct: 59 KLYIDLFRGTPMLVQILLIHLAVIPTIFGHSLGYMVSGITALILNCAAYNAEIFRAGIQS 118 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I KGQ +A+ ++GLT Q +R +ILPQ PL +EFI++LK +S+ + I P+I Sbjct: 119 IAKGQMEAARSLGLTHNQAMRKVILPQAFRRMIPPLGNEFIALLKDSSLVTVIAAPDILY 178 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ + +++ Y A +YL+LT Sbjct: 179 ASKVVAGASFRFWEPYIVAALLYLVLT 205 >gi|293193554|ref|ZP_06609824.1| amino acid ABC transporter, permease protein [Actinomyces odontolyticus F0309] gi|292819910|gb|EFF78912.1| amino acid ABC transporter, permease protein [Actinomyces odontolyticus F0309] Length = 225 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 101/168 (60%), Gaps = 4/168 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAV-IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + VT+ I+ +S V+SL++G F+ + +R + + +M Y+ R P LV LFV + Sbjct: 21 GLGVTVGISALSVVLSLVLGVFVGLGMRSRWRP--LRWLMQIYLEFVRIMPQLVLLFVAY 78 Query: 79 YGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 +GL + GI D A ++ TL A + +++R ++I+IP+ Q++++YA+GLT +QT+R Sbjct: 79 FGLTRVAGINLDGITASVLVFTLWGGAEMGDLVRGALIAIPRHQYESAYALGLTPRQTMR 138 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +ILPQT+ A P + ++K+TS+ I + E+ + Q+I+ Sbjct: 139 RVILPQTLRRLAPPAVNLITRMIKTTSLVVLIGVVEVLKVGQQIIDAN 186 >gi|115358739|ref|YP_775877.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria AMMD] gi|115284027|gb|ABI89543.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter ATP-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 500 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 123/218 (56%), Gaps = 14/218 (6%) Query: 1 MKYEW---FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI 57 M+++W F L+ D + + A VV + ++ +++++ +++GF +A+ R ++ Sbjct: 1 MQFDWHYAFQLLWD---KDFWRACVVVVELSVVAWLLGVLLGFPVALARQSHR-PLLKRA 56 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRS 112 Y+W FR PLLV L V Y LP + ++ D F A +I++ L+ +AY +EI R Sbjct: 57 AAVYIWFFRSLPLLV-LLVFIYNLPQVFPATSAVLSDPFTAGLIAMVLSETAYFAEIHRG 115 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I+S+P+GQ +A A+G+ R I++PQ I + L++EFI+I+K TS+ S I++ Sbjct: 116 GILSVPRGQLEAGRALGIRFAGIQRLIVMPQAIRIALPALANEFITIVKLTSLVSVISLA 175 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVY-LILTSFCYII 209 EI QR+ + + +AF Y LI+T F ++ Sbjct: 176 EILLVGQRLYTQNFLVFETMLAVAFYYVLIVTVFSRLL 213 >gi|332876444|ref|ZP_08444211.1| putative glutamine ABC transporter permease protein GlnM [Acinetobacter baumannii 6014059] gi|332735302|gb|EGJ66362.1| putative glutamine ABC transporter permease protein GlnM [Acinetobacter baumannii 6014059] Length = 172 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 46/135 (34%), Positives = 80/135 (59%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +++ I FY+ + R TPLL+QLF ++YGLP +GI D F +I LT +Y++E R+ Sbjct: 1 MLNRIAQFYIELSRNTPLLIQLFFLYYGLPKLGIKIDGFACGVIGLTFLGGSYMAEAFRA 60 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + S+ KGQ D++ +IGL Q R++I PQ + S + + + ++K +SV S I + Sbjct: 61 GLQSVAKGQIDSAKSIGLKPTQIFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVV 120 Query: 173 EIFQTAQRIVSTTYQ 187 E+ + ++ Y+ Sbjct: 121 ELLFVTKDLIGMDYK 135 >gi|323493012|ref|ZP_08098148.1| ABC-type glutamine transport system, permease component [Vibrio brasiliensis LMG 20546] gi|323312748|gb|EGA65876.1| ABC-type glutamine transport system, permease component [Vibrio brasiliensis LMG 20546] Length = 246 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 114/209 (54%), Gaps = 9/209 (4%) Query: 2 KYEWFNLIIDSFPQ-------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII 54 Y+W ++D + L A T+ ++ +S V+++ +GF +++ + + Sbjct: 19 DYQWGWYVLDPTTEQGQTNLKFLVAGFSDTIQVSLLSMVLAMTLGFIVSLPALSPLKPLR 78 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + I YV R P+LV L ++YG+P + + + F A +I+LT+ SA+++E+ R Sbjct: 79 A-INRIYVESIRSIPVLVLLLWVYYGMPTLLDVSLNHFWAGVIALTIAESAFMAEVFRGG 137 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I +I +GQ +A+ A+GL Q +R +ILPQ PL ++F+ ILK +S+ S I + + Sbjct: 138 IQAINRGQHEAAEALGLNYWQKMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLSD 197 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + + A +V Y PL IY L YL+L Sbjct: 198 LTRRANELVVNEYLPLEIYTFLVLEYLVL 226 >gi|322833910|ref|YP_004213937.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321169111|gb|ADW74810.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 327 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 115/221 (52%), Gaps = 21/221 (9%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VTL + +S ++ + IG +A I ++ + Y+W FRGTPLLVQL +Y Sbjct: 76 GLGVTLGLTVVSMLLGVFIGLMLA-IARLSDSLLLRRLAGLYIWFFRGTPLLVQLL-FWY 133 Query: 80 GL----PHI--GIVFDS-------------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + P + G+ F A I L LN +AY++EIIR+ ++S+ G Sbjct: 134 NMSTLFPRVVLGVPFGPEYMSWNTNDLITPLTAAIAGLALNEAAYMAEIIRAGLLSVDNG 193 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q + + A G++R + +R II+PQ + + P ++ IS++K+TS+ S I + ++ + Q Sbjct: 194 QAETAQAFGMSRGRALRRIIIPQAMRSIIPPTGNQLISMIKATSLVSVIAMGDLLYSVQT 253 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + + T++ + + YL +TS + Q IE ++ T Sbjct: 254 VYNRTFEVVPMLMVAVIWYLFITSLLNLGQSAIERYYSRGT 294 >gi|65318067|ref|ZP_00391026.1| COG0765: ABC-type amino acid transport system, permease component [Bacillus anthracis str. A2012] Length = 218 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +A++RI I++ + +V R PL++ F+ ++ LP +GI Sbjct: 25 SVIALIGSFILGVVLAIMRIA-PIRILNWLGTAFVEFVRNIPLVLIAFIFYFALPVVGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + H++LPQ + Sbjct: 84 XNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQAMYHVVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|299770574|ref|YP_003732600.1| ABC-type amino acid transport system, permease component [Acinetobacter sp. DR1] gi|298700662|gb|ADI91227.1| ABC-type amino acid transport system, permease component [Acinetobacter sp. DR1] Length = 219 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 109/187 (58%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +++ + ++ F ++A + TL I+ IS ++++++G I I I + +++ I F Sbjct: 1 MNWQYIHSVLPQF----FSATLTTLKISIISIILAILVGL-ICSILITYRVRVLNRIAQF 55 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLL+QLF ++YGLP +GI D F +I LT +Y++E R+ + S+ KG Sbjct: 56 YIELSRNTPLLIQLFFLYYGLPKLGIKIDGFACGVIGLTFLGGSYMAEAFRAGLQSVAKG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q D++ +IGL Q R++I PQ + S + + + ++K +SV S I + E+ + Sbjct: 116 QIDSAKSIGLQPIQIFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKD 175 Query: 181 IVSTTYQ 187 ++ Y+ Sbjct: 176 LIGMDYK 182 >gi|262278739|ref|ZP_06056524.1| amino acid ABC transporter membrane protein [Acinetobacter calcoaceticus RUH2202] gi|262259090|gb|EEY77823.1| amino acid ABC transporter membrane protein [Acinetobacter calcoaceticus RUH2202] Length = 219 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 109/187 (58%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +++ + ++ F ++A + TL I+ IS ++++I+G I I I + +++ I F Sbjct: 1 MNWQYIHSVLPQF----FSATLTTLKISIISIILAIIVGL-ICSILITYRVRVLNRIAQF 55 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLL+QLF ++YGLP +GI D F +I LT +Y++E R+ + S+ KG Sbjct: 56 YIELSRNTPLLIQLFFLYYGLPKLGIKIDGFACGVIGLTFLGGSYMAEAFRAGLQSVAKG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q D++ +IGL Q R++I PQ + S + + + ++K +SV S I + E+ + Sbjct: 116 QIDSAKSIGLQPIQIFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKD 175 Query: 181 IVSTTYQ 187 ++ Y+ Sbjct: 176 LIGMDYK 182 >gi|317047450|ref|YP_004115098.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316949067|gb|ADU68542.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 290 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 100/175 (57%), Gaps = 14/175 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +V TL ++ ++ ++ G A++ + + ++ I Y WIFRGTPL++QL + F Sbjct: 73 GVVNTLIMSVLAMGFGVLFGVITAIMYMS-PNPVLHYIAVGYAWIFRGTPLILQLLLWFN 131 Query: 80 ---GLPHIGI----------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P I I V F+A ++ L++N AY SE++R+ ++S+ GQ++A+ Sbjct: 132 LALVFPTISIPGVFSVQTVTVMTPFLAALLGLSINQGAYTSEVVRAGLLSVDTGQYEAAK 191 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 AIG+ R Q ++ IILPQ + P+ +EFIS++K+TS+AS I E+ Q I Sbjct: 192 AIGMPRLQALQRIILPQAMRVILPPVGNEFISMIKTTSLASMIQYSELLYNTQNI 246 >gi|158423073|ref|YP_001524365.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158329962|dbj|BAF87447.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 222 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 65/198 (32%), Positives = 107/198 (54%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F +I+ P LL A + T +A ++++IG ++R + L+ F V + Sbjct: 7 FTPVIEGLPDLL-AGCLGTFVLALGGMALAIVIGIGGVLLRDSRHAPVRFLVKAF-VEVI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP LVQ+F I++ LP G+ D II+L +N AY EIIR + SI +GQ +A Sbjct: 65 RNTPFLVQIFFIYFALPLAGVRLDPTPTAIIALGINGGAYAIEIIRGGVQSISRGQVEAG 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL + R I+L + L+S+FI + +TS+AS I+ E+ AQRI S + Sbjct: 125 LALGLHKALVFRLIVLKPALRAVYPSLTSQFILLTLTTSIASAISAYELTSVAQRIESDS 184 Query: 186 YQPLIIYCELAFVYLILT 203 ++ ++ F+YL+++ Sbjct: 185 FRSFEVFGTATFMYLVIS 202 >gi|261417154|ref|YP_003250837.1| polar amino acid ABC transporter, inner membrane subunit [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373610|gb|ACX76355.1| polar amino acid ABC transporter, inner membrane subunit [Fibrobacter succinogenes subsp. succinogenes S85] gi|302325679|gb|ADL24880.1| putative amino acid ABC transporter, permease/amino acid-binding protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 498 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 65/225 (28%), Positives = 120/225 (53%), Gaps = 15/225 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSD--TIISLIMHF 60 + N + DS + + + TL I+ + ++ ++IGF IA IR F+ +++ Sbjct: 278 YKNFVKDSRWKFIVEGLRNTLVISFFAALLGIMIGFVIAQIRTSNEFNGRFKVLNWFAKA 337 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDS-----FVAIIISLTLNFSAYISEIIRSSII 115 Y+ + RGTP+++QL +I+Y IVF S + I++ +N AY+SEIIRS I Sbjct: 338 YLAVIRGTPMMIQLLIIYY------IVFSSVNINKILVAIVAFGINSGAYVSEIIRSGIK 391 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 + GQ +A ++GL + + +I+ PQ S L++EFIS++K TS+ I + ++ Sbjct: 392 GVDPGQIEAGRSLGLKFRTVLYYIVYPQAFKNSLPALTNEFISLIKETSICGYIGLTDLT 451 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + I S TY+ ++ +A +Y I+ + K+E + ++ Sbjct: 452 RGGDIIRSMTYEAMLPLLAVAAIYFIIVAGLSACVAKLEKRLKKN 496 >gi|228906388|ref|ZP_04070272.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis IBL 200] gi|228853300|gb|EEM98073.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis IBL 200] Length = 218 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ I +V R PL++ F+ ++ LP IGI Sbjct: 25 SVIALIGSFILGVILAVMRIA-PIRILNWIGSAFVEFVRNIPLVLIAFIFYFALPVIGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + +++LPQ + Sbjct: 84 LNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYVQAMYYVVLPQAVKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|218550123|ref|YP_002383914.1| Amino acid ABC transporter permease [Escherichia fergusonii ATCC 35469] gi|218357664|emb|CAQ90305.1| putative Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Escherichia fergusonii ATCC 35469] Length = 506 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 118/205 (57%), Gaps = 11/205 (5%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-- 84 ++ +++ S+++GF +A+ + + + Y+W+FR PLLV L + Y LP Sbjct: 27 LSLLTWFFSIVLGFILALAKQS-PRKLFNTPARIYIWLFRSIPLLV-LLIFVYNLPQAMP 84 Query: 85 ---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 I+ D F A +I++ L +AYI+EI R ++SIPKGQ +A+ A+G+ T +++ Sbjct: 85 SLASILNDPFRAGLIAMVLCEAAYIAEIHRGGLLSIPKGQSEAARALGMRYAGTQWRVVI 144 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL- 200 PQ + + L++E+I+I+K +S+ S I++ EI QR+ S + + +AF Y+ Sbjct: 145 PQALRVALPALANEYIAIVKLSSLVSVISLTEILMVGQRLYSQNFLVMETMAAVAFYYVF 204 Query: 201 ILTSFCYIIQIKIES--SVTQHTYS 223 I+T F ++++ ++E VTQ S Sbjct: 205 IVTVFDFLLK-RLEKYLDVTQRNTS 228 >gi|322517752|ref|ZP_08070604.1| polar amino acid uptake ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] gi|322123596|gb|EFX95214.1| polar amino acid uptake ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] Length = 232 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 106/185 (57%), Gaps = 10/185 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ + +++L++G + + ++ I YV IF+ TPLLVQ V+FYG Sbjct: 33 TLGISIGALIVALLLGLIFGAMSST-HNKVLRGISRIYVEIFQNTPLLVQFVVVFYG--- 88 Query: 84 IGIVFDSFVAIIISLT------LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 I I+ D V I ISLT + AYISEIIR+ I ++PKGQ +A+ + G T T+R Sbjct: 89 ISILTDGHVMIPISLTAILCVGVYTGAYISEIIRTGIEAVPKGQTEAALSQGFTYADTMR 148 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 IILPQ + T PL+++ ++++K+TS + I+ +I TA+ T + + AF Sbjct: 149 IIILPQAVRTILPPLTNQVVNLIKNTSTVAIISGADIMFTAKAWAYDTTNYVPAFAGAAF 208 Query: 198 VYLIL 202 +Y I+ Sbjct: 209 LYFIM 213 >gi|302540997|ref|ZP_07293339.1| amino acid ABC transporter, permease [Streptomyces hygroscopicus ATCC 53653] gi|302458615|gb|EFL21708.1| amino acid ABC transporter, permease [Streptomyces himastatinicus ATCC 53653] Length = 277 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 111/200 (55%), Gaps = 2/200 (1%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + +P L AA + TL ++ +FV++ +G A+ R ++ YV + R TP Sbjct: 40 LQDWPTYLGAAWL-TLKLSLAAFVLACALGLLGALAR-RSRHALVRAPAAVYVEVIRNTP 97 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +L+Q+FV ++ LP G+ A I +L LN AY++EI R+ I ++P+GQ +AS + Sbjct: 98 VLLQMFVAYFALPSAGLRLSPVQAGIAALGLNVGAYLTEIFRAGIQAVPRGQSEASRVLA 157 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+ +T H++LPQ + + ++ + I+ +S+ S I++PE+ TA I S + Sbjct: 158 LSPFRTFLHVVLPQALRNVYPAVINQLVQIILGSSLLSAISVPELTGTAMVINSRNLLTI 217 Query: 190 IIYCELAFVYLILTSFCYII 209 ++ A +YL+LT+ ++ Sbjct: 218 QVFGIAAVLYLVLTNAVVLV 237 >gi|254505865|ref|ZP_05118010.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus 16] gi|219551088|gb|EED28068.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus 16] Length = 264 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 115/189 (60%), Gaps = 6/189 (3%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH-FYVWIFRGTPLL 71 +P L + VT+ I+ IS + +L+IG A++++ S++++ + Y+ + R TPLL Sbjct: 55 WPAELIEGLFVTIKISLISLLFTLVIGLTTALLKL--SNSVVGRALATGYIELIRNTPLL 112 Query: 72 VQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 VQ++++++ P IG+ D F +++L+L AY +EI R + SI KGQ++A+ ++GL Sbjct: 113 VQIYLLYFVFGPVIGL--DRFATAVLALSLFQGAYTAEIFRGGLNSISKGQFEAAKSLGL 170 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T +ILPQ + + PL++E +S++K++S+ S + I ++ + IV+ T P Sbjct: 171 NPFYTYYDVILPQLLQRTLPPLTNEVVSLVKNSSIVSVMAIFDLTTEGRNIVAETAMPFE 230 Query: 191 IYCELAFVY 199 I+ +A +Y Sbjct: 231 IWFSVAAIY 239 >gi|188534744|ref|YP_001908541.1| Putative amino acid ABC transporter, permease protein [Erwinia tasmaniensis Et1/99] gi|188029786|emb|CAO97665.1| Putative amino acid ABC transporter, permease protein [Erwinia tasmaniensis Et1/99] Length = 218 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 95/175 (54%), Gaps = 18/175 (10%) Query: 48 FFSDTIISL---------------IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV 92 FF T+++L I+ YV +F+GTPLL+QLF+ F+G+ GI + Sbjct: 28 FFGGTLVALPLVRLRLAGRVWPNRIIRAYVELFQGTPLLMQLFLAFFGVALFGIDLSPWA 87 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 A ++LT SA++ +I SI ++PKGQW+A +GL+ QT+ ++LPQ + P Sbjct: 88 AAALALTCYTSAFLVDIWFGSIRALPKGQWEACRCLGLSTGQTLFRVVLPQALRIGIAPT 147 Query: 153 SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + ++K T++AS I E+ + + + TYQP ++ +A Y ++ CY Sbjct: 148 VGFAVQVVKGTALASIIGFIELTKAGTILNNVTYQPFKVFGLVALGYFLM---CY 199 >gi|220914445|ref|YP_002489754.1| polar amino acid ABC transporter inner membrane protein [Arthrobacter chlorophenolicus A6] gi|219861323|gb|ACL41665.1| polar amino acid ABC transporter, inner membrane subunit [Arthrobacter chlorophenolicus A6] Length = 365 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 120/233 (51%), Gaps = 22/233 (9%) Query: 2 KYEWFNLIIDSF-PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++EW ++ F Q + ++ TL + IS ++ ++GF +A++R+ S ++S+ F Sbjct: 101 RWEW-GVVAQWFTAQSVVNGLLETLKLTAISGILGFVLGFILALMRLSASPLLVSVSWTF 159 Query: 61 YVWIFRGTPLLVQLFVIFY----------GLPHIGIVF---------DSFVAIIISLTLN 101 WIFR TPLLVQL + + G+P + F F A ++ LTLN Sbjct: 160 -SWIFRSTPLLVQLLLWYNLGYLYEKISLGIPFTDVRFFEVQTTTLISQFAAAVLGLTLN 218 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 +AY +EIIR I+S+ +GQ +A+ A+G+ + I+LPQ + +E I ++K Sbjct: 219 QAAYSAEIIRGGILSVDQGQLEAAAALGIPAWRRSTRIVLPQAMRAILPTAFNEIIGLVK 278 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+ + E+F T Q I + T Q L + Y+++TS + Q IE Sbjct: 279 GTSIVYVLAYSELFYTVQVIYNRTQQVLPLLLVATLWYVVITSVLSVFQYYIE 331 >gi|325498437|gb|EGC96296.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Escherichia fergusonii ECD227] Length = 506 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 118/205 (57%), Gaps = 11/205 (5%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-- 84 ++ +++ S+++GF +A+ + + + Y+W+FR PLLV L + Y LP Sbjct: 27 LSLLTWFFSIVLGFILALAKQS-PRKLFNTPARIYIWLFRSIPLLV-LLIFVYNLPQAMP 84 Query: 85 ---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 I+ D F A +I++ L +AYI+EI R ++SIPKGQ +A+ A+G+ T +++ Sbjct: 85 SLASILNDPFRAGLIAMVLCEAAYIAEIHRGGLLSIPKGQSEAARALGMRYAGTQWRVVI 144 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL- 200 PQ + + L++E+I+I+K +S+ S I++ EI QR+ S + + +AF Y+ Sbjct: 145 PQALRVALPALANEYIAIVKLSSLVSVISLTEILMVGQRLYSQNFLVMETMAAVAFYYVF 204 Query: 201 ILTSFCYIIQIKIES--SVTQHTYS 223 I+T F ++++ ++E VTQ S Sbjct: 205 IVTVFDFLLK-RLEKYLDVTQRNTS 228 >gi|225862405|ref|YP_002747783.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus 03BB102] gi|225786434|gb|ACO26651.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus 03BB102] Length = 230 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 72/230 (31%), Positives = 123/230 (53%), Gaps = 13/230 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + ++P LL A I+ + SLI F A RI ++ +++ I H Y+ I Sbjct: 2 FEIFMSTYPTLLKATIITLQLTLTSLLLGSLIGLLF-AFFRIS-NNKVLNSIAHVYIAII 59 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ Sbjct: 60 RGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + Sbjct: 119 RSLGMPYSLAMRRIVLPQAFRQSIPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGN 178 Query: 186 YQPLIIY---------CELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 +Q L Y L F YL+ +Q K +SV HT + + Sbjct: 179 FQQLDTYIIVGLYYLVLVLLFTYLV-NLLEKRLQRKETNSVQVHTKNKKE 227 >gi|330446187|ref|ZP_08309839.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490378|dbj|GAA04336.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 223 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 106/189 (56%), Gaps = 13/189 (6%) Query: 33 VISLIIGFFIAVI---RIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 ++SL++G +A++ + +++ I + +F GTPLLVQ+F+I+YG + + Sbjct: 21 LVSLLVGCTLALLMTMTLILRTSVLHWISRGIITLFTGTPLLVQIFLIYYGPGQFDVTRE 80 Query: 90 SFV---------AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 SF+ +++L LN +AY +++ + + +IPKGQW A A+G+ K T+ + Sbjct: 81 SFLWDWLSQPWFCAMLALALNTAAYSTQLFKGAFDAIPKGQWQACRALGMETKTTL-STL 139 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LP I + S+E I + K TS+ASTITI +I AQRI + TY L ++ +YL Sbjct: 140 LPFAIRRAVPAYSNEVILVFKGTSLASTITIMDIMGYAQRINAQTYDTLTVFAIAGAMYL 199 Query: 201 ILTSFCYII 209 + + I+ Sbjct: 200 TVNAILSIL 208 >gi|324115108|gb|EGC09073.1| ABC transporter [Escherichia fergusonii B253] Length = 506 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 118/205 (57%), Gaps = 11/205 (5%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-- 84 ++ +++ S+++GF +A+ + + + Y+W+FR PLLV L + Y LP Sbjct: 27 LSLLTWFFSIVLGFILALAKQS-PRKLFNTPARIYIWLFRSIPLLV-LLIFVYNLPQAMP 84 Query: 85 ---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 I+ D F A +I++ L +AYI+EI R ++SIPKGQ +A+ A+G+ T +++ Sbjct: 85 SLASILNDPFRAGLIAMVLCEAAYIAEIHRGGLLSIPKGQSEAARALGMRYAGTQWRVVI 144 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL- 200 PQ + + L++E+I+I+K +S+ S I++ EI QR+ S + + +AF Y+ Sbjct: 145 PQALRVALPALANEYIAIVKLSSLVSVISLTEILMVGQRLYSQNFLVMETMAAVAFYYVF 204 Query: 201 ILTSFCYIIQIKIES--SVTQHTYS 223 I+T F ++++ ++E VTQ S Sbjct: 205 IVTVFDFLLK-RLEKYLEVTQRNTS 228 >gi|303250562|ref|ZP_07336759.1| arginine transporter permease subunit ArtQ [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252993|ref|ZP_07534880.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650550|gb|EFL80709.1| arginine transporter permease subunit ArtQ [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859522|gb|EFM91548.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 223 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 113/211 (53%), Gaps = 8/211 (3%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L+Y+A ++TL +A S ++ L++ V+ IS ++ + RG P ++ + Sbjct: 8 LIYSATLMTLGLALTSLIVGLLLSMLFVVLETN-KQPCISKPTSVFLALLRGLPEILVVL 66 Query: 76 VIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +IF+G L + F +F +++L+L FSAY S+ +R +I ++P GQW++ A+ Sbjct: 67 LIFFGSTELVEKLTGEYVEFSAFSCGVLALSLIFSAYASQSLRGAIQAVPNGQWESGAAL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+R T IILPQ + LS++++ +LK T++ S I + ++ + I + +QP Sbjct: 127 GLSRAHTFLRIILPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLMRQTDLINTNEHQP 186 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 Y A +YL +T +I +E T+ Sbjct: 187 FTWYGLAALIYLAITLISQVIIAGLEKRFTR 217 >gi|270260985|ref|ZP_06189258.1| transporter [Serratia odorifera 4Rx13] gi|270044469|gb|EFA17560.1| transporter [Serratia odorifera 4Rx13] Length = 219 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 50/157 (31%), Positives = 95/157 (60%), Gaps = 2/157 (1%) Query: 64 IFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI G Sbjct: 61 VIRGTPIVVQVMFIYFALPMAFSDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHNGF 120 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A A+GL+R++TIR++I+P + PL +++I +K TS+ I + E+ + Q I Sbjct: 121 REAGLALGLSRRETIRYVIMPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEI 180 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 ++ ++ L I+ +A +YLI+T + ++E + Sbjct: 181 IAGNFRALEIWSAVAVIYLIITLVLSFVLRRLERRMK 217 >gi|218674227|ref|ZP_03523896.1| amino acid ABC transporter permease [Rhizobium etli GR56] Length = 276 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 118/217 (54%), Gaps = 13/217 (5%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P+ L+ + VTL + IS V I+ +A+ R+ + ++ + Y++ FRGTPLL Q Sbjct: 60 PRYLHG-LWVTLSLVAISVVCGAILSLPLAMARLS-KNRALNWFAYGYIYFFRGTPLLAQ 117 Query: 74 LFVIFYGL----PH---IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 LF+++YGL P IGI + +++ + ++T+N +AY +EI+R +I S+P GQ + Sbjct: 118 LFLVYYGLGVFRPQLEAIGIWWFFREAWYCGLFAMTINTAAYQAEILRGAIESVPHGQRE 177 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+G+ + R +ILPQ + P +E I ++K ++V + IT+ ++ + S Sbjct: 178 AAAALGIHKAIAFRKVILPQAFIVALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFS 237 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T+ Y A YL + + IE +T+H Sbjct: 238 RTFD-YQTYLWAAIFYLAIVEALRHLWAWIERRLTRH 273 >gi|153011889|ref|YP_001373102.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151563777|gb|ABS17273.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 222 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 113/201 (56%), Gaps = 9/201 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++++ P LL +V+TL I + + S++ GF I V R + + YV + Sbjct: 6 FSVVLQYGPALL-KGLVLTLQITVLCGLASVVFGFLIGVGRKS-NVRPVRWACSLYVEVL 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 RGTP+L+ LF +F+ P I+FD F++ +I+LTL SA SE R+++ SI + Q Sbjct: 64 RGTPVLITLFWVFFCFP---IIFDVELSPFISAVIALTLYTSAITSESFRAALGSIGQDQ 120 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 DA A+GL+R + +++ PQTI + L S +S+ K +++ S + + E+ TAQ I Sbjct: 121 HDACKALGLSRFSKMMYVVAPQTIVRAIPNLMSNLVSLFKESALVSAVGVVELMYTAQNI 180 Query: 182 VSTTYQPLIIYCELAFVYLIL 202 + T +P+ + A VY ++ Sbjct: 181 SNVTARPVEVLTTAALVYFVI 201 >gi|332800264|ref|YP_004461763.1| polar amino acid ABC transporter, inner membrane subunit [Tepidanaerobacter sp. Re1] gi|332697999|gb|AEE92456.1| polar amino acid ABC transporter, inner membrane subunit [Tepidanaerobacter sp. Re1] Length = 223 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 121/212 (57%), Gaps = 9/212 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIF 65 ++ S P LL + +TL I I+ V+ I G F+A+ R++ S + +F Y I Sbjct: 11 VLRSIPYLL-EGVGITLEITVIALVLGTIAGLFLALCRVYGG----SFLHNFAVVYSRII 65 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R PLLV +F++++ I I +F A +++L ++ SAY EI R +I SI KGQ +A+ Sbjct: 66 RSLPLLVIVFMLYFLGSEI-INIPAFWAAVLALAMHTSAYQLEIFRGAIQSINKGQMEAA 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G+++ Q+I +ILPQ++ + ++E +LK +++A + I E+ + ++ + + T Sbjct: 125 LALGMSKYQSIFAVILPQSLRRAIPYWANEATIVLKDSAMAYVLGITELMRRSEYVSART 184 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 QP++ Y +YLI+T K+ES V Sbjct: 185 AQPMLTYIVSGLIYLIMTYAFTKSMAKVESKV 216 >gi|229188846|ref|ZP_04315880.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus ATCC 10876] gi|228594659|gb|EEK52444.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus ATCC 10876] Length = 218 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ I +V R PL++ F+ ++ LP IGI Sbjct: 25 SVIALIGSFILGVILAVMRIA-PIRILNWIGSAFVEFVRNIPLVLIAFIFYFALPVIGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + +++LPQ + Sbjct: 84 LNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYVQAMYYVVLPQAVKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGSDLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|330808726|ref|YP_004353188.1| amino acid ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376834|gb|AEA68184.1| putative amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 220 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 54/158 (34%), Positives = 91/158 (57%), Gaps = 1/158 (0%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 +S I +IG +A + I+ ++ YV + R TP+LV + +I++ LP +GI D Sbjct: 30 VSIAIGCVIGLAMA-FALLSKHRILRVLASVYVTVIRNTPILVLILLIYFALPSLGIRLD 88 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 + +I+L+L AY++E+ R ++SI KGQ +A AIGL Q +I +P + Sbjct: 89 KLPSFVITLSLYAGAYLTEVFRGGLLSIHKGQREAGLAIGLGEWQVKAYITVPVMLRNVL 148 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 LS+ FIS+ K TS+A+ I +PE+ A++I +Y+ Sbjct: 149 PALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYR 186 >gi|222081581|ref|YP_002540945.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726260|gb|ACM29349.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 216 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 57/163 (34%), Positives = 100/163 (61%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV +RGTP+LVQL VIFY LP +G+ + VA ++L LN +A+ SEI R+ ++++P Sbjct: 52 GLYVSFWRGTPILVQLLVIFYLLPFLGLELEPPVAAALALALNTAAFQSEIYRAGLLAVP 111 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+ +GLT QT I +PQ + T L E +++K++S+ S I + ++ + A Sbjct: 112 RGQIEAAEMLGLTAAQTFLCIEVPQAVRTMLPALVGEMQALVKNSSLVSVIAVMDVTRRA 171 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Q++ ++T++PL Y +Y+ + + I + +E +TQ Sbjct: 172 QQVAASTFRPLEAYASALLLYVAVGAALAGIGLLMERRLTQGA 214 >gi|160894911|ref|ZP_02075685.1| hypothetical protein CLOL250_02461 [Clostridium sp. L2-50] gi|156863342|gb|EDO56773.1| hypothetical protein CLOL250_02461 [Clostridium sp. L2-50] Length = 243 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 54/151 (35%), Positives = 88/151 (58%), Gaps = 1/151 (0%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ I YV FRGTP++VQL + +Y L P +G ++ LN AYISEI+R Sbjct: 71 VLDAICSVYVGFFRGTPMVVQLLLFYYVLLPIVGGHMSGVQVSMLVFGLNSGAYISEIMR 130 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S I+S+ GQ + A+GL+ T+R I++PQ + L +EFIS++K TSV S + Sbjct: 131 SGILSVDPGQMEGGRAMGLSFATTMRKIVIPQAVKNILPTLGNEFISLIKETSVVSFVGA 190 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 +++ I S +Y+ +I Y +A +Y+++ Sbjct: 191 TDLYVAFNYIGSNSYEFMIPYLVMALIYIVM 221 >gi|170739979|ref|YP_001768634.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168194253|gb|ACA16200.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 219 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 104/184 (56%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + ++F++ + GF + ++RI + + L YV + +G PLL+ LF +++GL Sbjct: 19 TVVLTALAFLLGSLAGFGVMLLRIARARWVRRLAFA-YVQVIQGLPLLILLFCVYFGLGV 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 IG+ VA ISL + SA++ EI R + ++P+ Q +A+ + L+R Q + +ILPQ Sbjct: 78 IGVELSPLVAAAISLMVYCSAFLGEIWRGCVEAVPRTQGEAAECLALSRWQALVDVILPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + P F+ +LKSTS+AS + E+ + +Q I ++ +QP +++ +Y L Sbjct: 138 AARIAVPPTVGFFVQVLKSTSLASVVGFVELTRASQLINNSIFQPFLVFGLAGALYFAL- 196 Query: 204 SFCY 207 CY Sbjct: 197 --CY 198 >gi|104782330|ref|YP_608828.1| arginine/ornithine ABC transporter permease [Pseudomonas entomophila L48] gi|95111317|emb|CAK16037.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 232 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 113/207 (54%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++LI + P L I +TL + IS L++ +A++R+ S ++ + Y ++ Sbjct: 5 YSLIWQNLP-LYLGGIALTLKVLLISLACGLVLAIPLALMRVSRS-CLLRVPAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V S + ++ +N SAY +E++ S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFEAVRQSPLWPYLSSATFCTCLAFAINTSAYSAELLAGSLRA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P+G+ +A+ A+G++R R I+LP + + S+E + +L++TS+AS +T+ +I Sbjct: 123 TPRGELEAARAMGMSRLTLYRRILLPSALRRALPQYSNEVLMMLQTTSLASIVTLVDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + Y P + +YL+LT Sbjct: 183 AAKTFNARYYLPFEAFITAGLIYLVLT 209 >gi|296533472|ref|ZP_06896051.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296266198|gb|EFH12244.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 223 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 106/202 (52%), Gaps = 2/202 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L+ + TL ++ ++ + L+ G +A++ +I L + +FR P LV L Sbjct: 20 ILWQGFLYTLGLSAMTVPLGLVGGVMLALLSTAGPRSIRWLAAGWTD-LFRAIPPLVLLV 78 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 ++ GLP G+ ++ A+ I LN AY E++R+ I S+P+GQ +A+ + GL R Q Sbjct: 79 FLYAGLPFAGLDVGAWGAVAIGFFLNTGAYYGEVLRAGIESVPRGQMEAARSTGLNRAQA 138 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 + H++LPQ + L S + ++K TS+AS + +PE+ A++ + TY I Sbjct: 139 LAHVVLPQAVRNVLPDLVSNTLEVVKLTSIASVVALPELLFQARQAQNATYNATPIVAAA 198 Query: 196 AFVYLILTSFCYIIQIKIESSV 217 +L+L +I ++E+ Sbjct: 199 VAYFLLLWPLVRLIS-RLENKA 219 >gi|291548167|emb|CBL21275.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Ruminococcus sp. SR1/5] Length = 211 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 60/177 (33%), Positives = 102/177 (57%), Gaps = 11/177 (6%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI--GIVFD---SFVAIIISLTLNFSAY 105 + +I I+ Y+ I RGTPL++QL V+++G P+ GI S +A+ I+ +N++AY Sbjct: 38 NKVIRTIVSGYISIMRGTPLMLQLMVVYFG-PYFIFGIRISMGYSLIAVFIAFAINYAAY 96 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 +EI R I S+P GQ++A+ +G + QT IILPQ I +++E I+++K TS+ Sbjct: 97 FAEIYRGGIESMPVGQYEAAKILGYNKVQTFFRIILPQVIKRILPSITNEVITLVKDTSL 156 Query: 166 ASTITIPEIFQTAQRIVS--TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 A + + E+F A++I S TT P +I A Y + ++ K+E S+ + Sbjct: 157 AFVVAVAEMFTIAKQIASAQTTMMPFVI---AAIFYYVFNLIVAVVMQKVEKSMNYY 210 >gi|260550581|ref|ZP_05824790.1| amino acid ABC transporter membrane protein [Acinetobacter sp. RUH2624] gi|260406292|gb|EEW99775.1| amino acid ABC transporter membrane protein [Acinetobacter sp. RUH2624] Length = 219 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 109/187 (58%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +++ + ++ F ++A + TL I+ IS ++++I+G I I I + +++ I F Sbjct: 1 MNWQYIHSVLPQF----FSATLTTLKISIISIILAIIVGL-ICSILITYRVRVLNRIAQF 55 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLL+QLF ++YGLP +GI D F +I LT +Y++E R+ + S+ KG Sbjct: 56 YIELSRNTPLLIQLFFLYYGLPKLGIKIDGFTCGVIGLTFLGGSYMAEAFRAGLQSVAKG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q D++ +IGL Q R++I PQ + S + + + ++K +SV S I + E+ + Sbjct: 116 QIDSAKSIGLQPIQIFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKD 175 Query: 181 IVSTTYQ 187 ++ Y+ Sbjct: 176 LIGMDYK 182 >gi|229194959|ref|ZP_04321740.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus m1293] gi|228588527|gb|EEK46564.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus m1293] Length = 218 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 104/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ + V R PL++ F+ ++ LP +GI Sbjct: 25 SVIALIGSFILGVVLAVMRIA-PIRILNWLGAAIVEFVRNIPLVLIAFIFYFALPVVGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + H++LPQ + Sbjct: 84 LNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQAMYHVVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|172063474|ref|YP_001811125.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171995991|gb|ACB66909.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 500 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 123/218 (56%), Gaps = 14/218 (6%) Query: 1 MKYEW---FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI 57 M+++W F L+ D + + A VV + ++ +++++ +++GF +A+ R ++ Sbjct: 1 MQFDWHYAFQLLWD---KDFWRACVVVVELSVVAWLLGVLLGFPVALARQSHR-PLLKRA 56 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRS 112 Y+W FR PLLV L V Y LP + ++ D F A +I++ L+ +AY +EI R Sbjct: 57 AAVYIWFFRSLPLLV-LLVFIYNLPQVFPATSAVLSDPFTAGLIAMVLSETAYFAEIHRG 115 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I+S+P+GQ +A A+G+ R I++PQ I + L++EFI+I+K TS+ S I++ Sbjct: 116 GILSVPRGQLEAGRALGIRFAGIQRLIVMPQAIRIALPALANEFITIVKLTSLVSVISLA 175 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVY-LILTSFCYII 209 EI QR+ + + +AF Y LI+T F ++ Sbjct: 176 EILLVGQRLYTQNFLVFETMLAVAFYYVLIVTVFSRLL 213 >gi|315652804|ref|ZP_07905778.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Eubacterium saburreum DSM 3986] gi|315485006|gb|EFU75414.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Eubacterium saburreum DSM 3986] Length = 221 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 86/142 (60%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TPLL+QLF I+YGLP +GI D+FV ++ L +Y+ E RS I SI K Sbjct: 58 YVELSRNTPLLIQLFFIYYGLPKLGIKIDAFVCGVLGLAFLGGSYMCEAFRSGIESIDKI 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++GL+ Q + +I+LPQ ++ S + I +LK TSV S I++ ++ TA+ Sbjct: 118 QEESALSLGLSHNQALFYILLPQAVSISTPAFVANIIFLLKETSVFSAISLMDLMFTAKD 177 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 ++ Y+ + L F YLI+ Sbjct: 178 LIGIYYKTVESLALLVFFYLII 199 >gi|307330911|ref|ZP_07610044.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] gi|306883452|gb|EFN14505.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] Length = 312 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 114/208 (54%), Gaps = 22/208 (10%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I +S V+ +++G +AV+R+ + + + I Y+W FRGTP+ VQL V F + Sbjct: 75 TVWITILSMVLGVVLGIILAVMRLS-KNPVTASIAWGYIWFFRGTPVYVQLLVWF----N 129 Query: 84 IGIVFD-----------------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 +G+VFD F+A ++ L LN +AY++EI R+ + S+ +GQ +A+ Sbjct: 130 LGLVFDYINIMPIYKDEWSDFMTPFLAALLGLGLNEAAYMAEICRAGLQSVDEGQSEAAQ 189 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G++ +T+R ++LPQ + P +EFI++LK+TS+ + ++ Q + + Sbjct: 190 ALGMSHAKTLRRVVLPQAMRVIVPPTGNEFINMLKTTSLVIAVQYWDLLQATSEVGQNSG 249 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIE 214 + A YLILTS + Q +E Sbjct: 250 ATAEMLFLAAAWYLILTSVLSVGQYYLE 277 >gi|269120155|ref|YP_003308332.1| polar amino acid ABC transporter inner membrane subunit [Sebaldella termitidis ATCC 33386] gi|268614033|gb|ACZ08401.1| polar amino acid ABC transporter, inner membrane subunit [Sebaldella termitidis ATCC 33386] Length = 217 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 101/172 (58%), Gaps = 1/172 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L A ++TL IA + S+++G ++I +++ I++ ++ YV + R TPLL+Q+F Sbjct: 14 LFVKASILTLQIALLGIAGSVLLGIVNSII-LYYKIKILNKVVAVYVEVSRNTPLLIQIF 72 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +++GLP +GI ++ + + +Y++E R+ + SI K Q ++ +IGL+R+Q Sbjct: 73 FLYFGLPALGIKLSNYTCALTGIIFLGGSYMTEAFRAGLESIEKVQIESGLSIGLSRRQL 132 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +R++I PQ + + FI +LK TSV S I++ E+ T +++ Y+ Sbjct: 133 MRYVIFPQAFRIALPATGANFIFLLKETSVVSAISVAELLYTTNSLIAIYYK 184 >gi|228478438|ref|ZP_04063042.1| ABC-type amino acid transport system, permease component [Streptococcus salivarius SK126] gi|312862640|ref|ZP_07722880.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] gi|312862691|ref|ZP_07722931.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] gi|228249796|gb|EEK09083.1| ABC-type amino acid transport system, permease component [Streptococcus salivarius SK126] gi|311101500|gb|EFQ59703.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] gi|311101551|gb|EFQ59754.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] Length = 232 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 106/185 (57%), Gaps = 10/185 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ + +++L++G + + ++ I YV IF+ TPLLVQ V+FYG Sbjct: 33 TLGISIGALIVALLLGLIFGAMSST-HNKVLRGISRVYVEIFQNTPLLVQFVVVFYG--- 88 Query: 84 IGIVFDSFVAIIISLT------LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 I I+ D V I ISLT + AYISEIIR+ I ++PKGQ +A+ + G T T+R Sbjct: 89 ISILTDGHVMIPISLTAILCVGVYTGAYISEIIRTGIEAVPKGQTEAALSQGFTYADTMR 148 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 IILPQ + T PL+++ ++++K+TS + I+ +I TA+ T + + AF Sbjct: 149 IIILPQAVRTILPPLTNQVVNLIKNTSTVAIISGADIMFTAKAWAYDTTNYVPAFAGAAF 208 Query: 198 VYLIL 202 +Y I+ Sbjct: 209 LYFIM 213 >gi|120603331|ref|YP_967731.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris DP4] gi|120563560|gb|ABM29304.1| amino acid ABC transporter membrane protein 1, PAAT family [Desulfovibrio vulgaris DP4] Length = 278 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 91/149 (61%), Gaps = 3/149 (2%) Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 L+ YV R TPLLVQLFV ++ + P G+ + +++L + AY++EI+R+ I Sbjct: 114 LVARLYVESVRNTPLLVQLFVTYFAIAPVFGL--GRMASAVMALGVFEGAYMAEILRAGI 171 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++P+GQW+AS ++G+ T +ILPQ + + PL+ + +S++K +S+AS I I E+ Sbjct: 172 AAVPQGQWEASRSLGMDEPGTYVQVILPQALRRALPPLTGQAVSLVKDSSLASAIAIHEL 231 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 AQ I++ T+ ++ A +YL +T Sbjct: 232 TMQAQTIIAETFLTFEVWLLTAAIYLCVT 260 >gi|303246864|ref|ZP_07333141.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] gi|302491881|gb|EFL51761.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] Length = 233 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 67/198 (33%), Positives = 113/198 (57%), Gaps = 18/198 (9%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH--F 60 +++ ++ + Q L +V TL I+ +S V+SL++G +AV+R+ + L+ Sbjct: 5 FDFTQVVTGEYGQWLVTGLVTTLKISAVSIVLSLVLGTLVAVMRL---SKVRPLVWASAT 61 Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIGIVFD-------SFVAIIISLTLNFSAYISEI 109 Y FR TPLLVQ+F ++G LP V D F +I+LT+ SA+I+E Sbjct: 62 YTEFFRNTPLLVQIFFWYFGSYNVLPQF--VNDWLYKQDFEFACGVIALTVYTSAFIAEE 119 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IRS + SIPK Q +AS A GL+ Q + ++ILPQ PL S+F++++K++S+ TI Sbjct: 120 IRSGVFSIPKNQLEASRACGLSFTQAMVYVILPQAFRVIIPPLISQFLNLIKNSSLVMTI 179 Query: 170 TIPEIFQTAQRIVSTTYQ 187 + ++ A++I + T+ Sbjct: 180 GVMDLTYMARQIEAHTFH 197 >gi|311232933|gb|ADP85787.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris RCH1] Length = 278 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 91/149 (61%), Gaps = 3/149 (2%) Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 L+ YV R TPLLVQLFV ++ + P G+ + +++L + AY++EI+R+ I Sbjct: 114 LVARLYVESVRNTPLLVQLFVTYFAIAPVFGL--GRMASAVMALGVFEGAYMAEILRAGI 171 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++P+GQW+AS ++G+ T +ILPQ + + PL+ + +S++K +S+AS I I E+ Sbjct: 172 AAVPQGQWEASRSLGMDEPGTYVQVILPQALRRALPPLTGQAVSLVKDSSLASAIAIHEL 231 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 AQ I++ T+ ++ A +YL +T Sbjct: 232 TMQAQTIIAETFLTFEVWLLTAAIYLCVT 260 >gi|257056920|ref|YP_003134752.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] gi|256586792|gb|ACU97925.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] Length = 223 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 62/189 (32%), Positives = 103/189 (54%), Gaps = 11/189 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++W + P +L+ ++VT+ + ++ ++G A++R + I L+ V Sbjct: 5 WDW-QFAFEVLPAILHG-LLVTIQATVLGSALAYVLGLVFALLR----RSPIRLVSG-GV 57 Query: 63 WIF----RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 W+F R TPLLVQLF +FY LP +GI V +I L L+++ Y +E+ R+ I ++P Sbjct: 58 WLFMEFVRSTPLLVQLFFLFYVLPLVGITLSPMVTGVIGLGLHYATYTAEVYRAGIEAVP 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQW+A+ A+ L R +T +ILPQ IT L + IS+ K T + I + +I A Sbjct: 118 KGQWEAATALSLPRTRTWTAVILPQAITRVLPALGNYTISMFKETPLLLAIGVLDIVGAA 177 Query: 179 QRIVSTTYQ 187 Q S ++ Sbjct: 178 QEEASLAFR 186 >gi|258545834|ref|ZP_05706068.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Cardiobacterium hominis ATCC 15826] gi|258518850|gb|EEV87709.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Cardiobacterium hominis ATCC 15826] Length = 231 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 118/233 (50%), Gaps = 20/233 (8%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W ++ D+ P L + + TL + +S +I L I ++ L + + + Sbjct: 2 HWTQILTDNLP-LWLSGLWQTLWLVALSLLIGLTIAIPCGMLLSSRCAIWWKLPVMAFSY 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFD----------------SFVAIIISLTLNFSAYIS 107 IFRGTP+LVQL++ +YG IG+V ++ +++S LN +AY + Sbjct: 61 IFRGTPMLVQLYIFYYG---IGLVIGRIPGVRELALWPLLRQAWPWVMLSFILNTAAYTA 117 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 EI+R +I + PKG+ +A+ A+G+ R+Q IILP + +E I +L +++AS Sbjct: 118 EIVRGAIETTPKGEIEAAKALGMNRRQIQWRIILPGAARRALPAYGNEIIFMLHGSAIAS 177 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T T+ +I A + + TY+P + A +YL +T I +IE + +H Sbjct: 178 TATLLDITGVANTLYTRTYEPFAPFLTAAVIYLAITLCIVGIFRRIEKRLNRH 230 >gi|154483451|ref|ZP_02025899.1| hypothetical protein EUBVEN_01154 [Eubacterium ventriosum ATCC 27560] gi|149735703|gb|EDM51589.1| hypothetical protein EUBVEN_01154 [Eubacterium ventriosum ATCC 27560] Length = 219 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 106/182 (58%), Gaps = 2/182 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN I + P + AA +TL +A ++++++G +++IR +F ++ I+ FY+ + Sbjct: 3 FNFINEHIPLYVEAA-KLTLIMAFWGILLAIVVGLIVSLIR-YFKVPVLDKIVGFYIELS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL+QLF +++GLP +GIV S +I L +Y++E RS + ++ Q ++ Sbjct: 61 RNTPLLIQLFFLYFGLPKVGIVLTSEQCGVIGLAFLGGSYMAEAFRSGLDNVESIQIQSA 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ + QT R++ILPQ ++ S + I ++K TSV S + + ++ + ++ Sbjct: 121 LSLGMKKSQTFRYVILPQAVSNSIPAFCANIIFLIKETSVFSAVALADLMFITKDLIGIY 180 Query: 186 YQ 187 Y+ Sbjct: 181 YK 182 >gi|313107728|ref|ZP_07793910.1| hypothetical protein PA39016_001060055 [Pseudomonas aeruginosa 39016] gi|187939707|gb|ACD38849.1| polar amino acid uptake transporter family protein [Pseudomonas aeruginosa] gi|310880412|gb|EFQ39006.1| hypothetical protein PA39016_001060055 [Pseudomonas aeruginosa 39016] Length = 223 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 116/209 (55%), Gaps = 12/209 (5%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISL 56 M Y++ F+ + S P LL + VTL +A +S +I L+ GF ++++ R FF I Sbjct: 1 MNYQFDFHFLGGSLPALL-DGLKVTLELALVSNLIGLVAGFGLSLMTLSRWFF----IRW 55 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 +V FR TP L+Q+ FY LP + G+ + V ++L LN +A+ +E R+ + Sbjct: 56 PAQLFVEFFRCTPALLQIVWFFYCLPMLFGLFIEPIVMGFLALGLNLTAFNAEAYRAGVQ 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP-LSSEFISILKSTSVASTITIPEI 174 ++P+ Q DAS A+GL Q H++LPQ + SAVP L + I L+ +++ + + + ++ Sbjct: 116 AVPREQLDASTALGLKPWQRTLHVVLPQAL-RSAVPVLMTNGIGSLQQSALVAIVAVSDL 174 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + + Y+PL Y +A VY L+ Sbjct: 175 MYVGKSLATEAYRPLETYTLIALVYFALS 203 >gi|307130609|ref|YP_003882625.1| glutamine ABC transporter membrane protein [Dickeya dadantii 3937] gi|306528138|gb|ADM98068.1| glutamine transporter subunit; membrane component of ABC superfamily [Dickeya dadantii 3937] Length = 219 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 121/207 (58%), Gaps = 9/207 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAA--IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 M+++W ++I S PQLL A ++ + + ++ ++ F V +FS+ I +L+ Sbjct: 1 MQFDW-SVIWPSIPQLLEGAQMTLLISVLGLLGGLVIGVVAGFARVYGGWFSNRI-ALV- 57 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 ++ + RGTP+++Q+ I++ LP + + D A II++ +N AYI+EI R +++S Sbjct: 58 --FIEVIRGTPMVIQIMYIYFALPMMLTSVRIDPVTAAIITIMINSGAYIAEITRGAVLS 115 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I KG +A A+GL+ + T+RH+I P + PL +++I +K TS+ I + E+ + Sbjct: 116 IHKGFTEAGLALGLSHRATLRHVITPLALRRMLPPLGNQWIISIKDTSLCIVIGVSELTR 175 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 AQ I++ ++ L I A +YL++T Sbjct: 176 QAQEIIAGNFRALEILTATAIIYLVIT 202 >gi|262038365|ref|ZP_06011742.1| amino acid ABC transporter, amino acid-binding/permease protein [Leptotrichia goodfellowii F0264] gi|261747583|gb|EEY35045.1| amino acid ABC transporter, amino acid-binding/permease protein [Leptotrichia goodfellowii F0264] Length = 523 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 104/199 (52%), Gaps = 18/199 (9%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSD-----------TIISLIMHFYVWIFRGT 68 TL I+ V+ IIG + +++ +D II++I Y+ +FRGT Sbjct: 294 GTATTLGISLTGTVVGFIIGLGVMLVKNINTDERTSAVKKIGLKIINMIFSIYIAVFRGT 353 Query: 69 PLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 P++VQ +IFYG + A + +++N AY+ EIIR I SI KGQ++A+ A Sbjct: 354 PMIVQSMIIFYGSSQVLNWNLSPLGAALFIVSINTGAYMCEIIRGGIDSIDKGQFEAAQA 413 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST--- 184 IG+T Q +++II PQ + +EFI +K TSV S I++ E+F ++ + T Sbjct: 414 IGMTHFQMMKNIIFPQVFRIILPSIGNEFIINIKDTSVLSVISVTELFFVSKSVAGTYSK 473 Query: 185 TYQPLIIYCELAFVYLILT 203 Y+ II C +Y LT Sbjct: 474 YYEVFIITC---VIYFFLT 489 >gi|240102150|ref|YP_002958458.1| Amino acid ABC transporter, permease protein [Thermococcus gammatolerans EJ3] gi|239909703|gb|ACS32594.1| Amino acid ABC transporter, permease protein [Thermococcus gammatolerans EJ3] Length = 229 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 94/162 (58%), Gaps = 2/162 (1%) Query: 42 IAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTL 100 +A++ + T+ + M Y RG PLL FVIFY +P IG+ F+A ++ L + Sbjct: 41 VALMETYGGKTLRRVAM-VYEGTLRGIPLLAIYFVIFYSMPMLIGLGLSPFLAAVVGLGI 99 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 SAY S+I RS I ++ +GQ +A+ ++G+++ Q IRHI+LPQ + S +E++ +L Sbjct: 100 RSSAYQSQIFRSGIQAVDEGQIEAALSLGMSQWQIIRHIVLPQALRMSIPAWMNEYVIVL 159 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 K TS+A + I E+ + A +VS T +P Y A YL + Sbjct: 160 KDTSIALALGIVELTRQATYLVSITAEPFRYYGLAALFYLAM 201 >gi|113971389|ref|YP_735182.1| polar amino acid ABC transporter inner membrane subunit [Shewanella sp. MR-4] gi|117919333|ref|YP_868525.1| polar amino acid ABC transporter inner membrane subunit [Shewanella sp. ANA-3] gi|113886073|gb|ABI40125.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella sp. MR-4] gi|117611665|gb|ABK47119.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella sp. ANA-3] Length = 226 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 63/163 (38%), Positives = 93/163 (57%), Gaps = 3/163 (1%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV + RGTP++VQL VI Y + D A II+ LN AYISEIIR+ I ++ Sbjct: 65 ELYVGVIRGTPVVVQL-VILYFIVLAAFDVDKVTAAIIAFGLNSGAYISEIIRAGIQAVD 123 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A+ ++GL++ T++ IILPQ I L +EFI +LK T+V I ++ + Sbjct: 124 KGQTEAARSLGLSQAMTMKLIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAG 183 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQH 220 + I S T++ I A +YL LT SF +++ K E + Q Sbjct: 184 EIIRSRTFEDSIPLFTCALIYLFLTYSFTFMLS-KFEKRLKQS 225 >gi|319780314|ref|YP_004139790.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166202|gb|ADV09740.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 218 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 86/143 (60%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TP LVQLF IF+GLP +G+ D +A ++++TLN +AY EI+ + + ++P G Sbjct: 56 YVEVMRNTPFLVQLFFIFFGLPSLGVRLDPLLAAMLAMTLNMAAYTIEIVGAGLDAVPGG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+GL +Q I+LPQ + L+S+ + ++ ++V S I + E+ A Sbjct: 116 QTEAALALGLRPRQVFVKIVLPQALKIIYPALTSQIVIMMLESAVVSQIAVRELTYEADM 175 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + + T++ Y + VYL L+ Sbjct: 176 LQARTFRSFETYFVVTLVYLALS 198 >gi|300313611|ref|YP_003777703.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300076396|gb|ADJ65795.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 247 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 68/242 (28%), Positives = 123/242 (50%), Gaps = 28/242 (11%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF--------FSDT 52 M + W II + L +++TL ++ IS +I +IG + ++R+ + Sbjct: 1 MDFRWS--IIQGYAPLFAKGVLMTLQVSLISILIGTVIGLLVGMLRLAEVQHGPWKWPLK 58 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFY-----------GLPHIGIV-------FDSFVAI 94 + + FYV FRGTPL VQ+ +I + GL G + + +F++ Sbjct: 59 SMRWLAGFYVAFFRGTPLFVQIMLIHFAVMPVLVQQEHGLLITGELARTIKQDYGAFLSG 118 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 ++L+LN AYISEI R+ I SI +GQ A+ ++G+ T+R+++LPQ PL + Sbjct: 119 TVALSLNAGAYISEIFRAGIQSIERGQSYAAASLGMNYGLTMRYVVLPQAFRRMLPPLGN 178 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 E I++LK +S+ S I + E+ A+ + T + Y ++ +Y +T ++ ++E Sbjct: 179 EAITLLKDSSLVSAIGLAELAYAARTVAGTYARYWEPYITISVLYFSMTICLALVVARLE 238 Query: 215 SS 216 S Sbjct: 239 SK 240 >gi|328957593|ref|YP_004374979.1| high affinity arginine ABC transporter binding lipoprotein [Carnobacterium sp. 17-4] gi|328673917|gb|AEB29963.1| high affinity arginine ABC transporter binding lipoprotein [Carnobacterium sp. 17-4] Length = 507 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 64/188 (34%), Positives = 115/188 (61%), Gaps = 18/188 (9%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF----YVWIFRGTPLLVQLFVIFY 79 T+ I+ +S I+G ++ +R+ + IMHF YV RGTP+++Q+ I++ Sbjct: 313 TILISVVSVFFGSILGIGLSFMRMSKNK-----IMHFVATAYVEFVRGTPMMIQVMFIYF 367 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + ++ I + + II+++LN +AYI EIIRS + S+PKGQ +A+ ++G+++K ++R I Sbjct: 368 AVGYL-INIPALASGIIAVSLNSAAYICEIIRSGLNSVPKGQAEAARSLGMSKKISMRQI 426 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPE-IFQTAQRIVSTTYQ---PLIIYCEL 195 I PQ + L +EFI+++K +S+ S I + + IFQT + + S +Y+ PL++ Sbjct: 427 IFPQALKNIWPALGNEFITVIKESSIVSIIGVSDLIFQT-KVVTSVSYRGIAPLVVTM-- 483 Query: 196 AFVYLILT 203 +Y ILT Sbjct: 484 -IIYFILT 490 >gi|293554038|ref|ZP_06674638.1| ABC-type amino acid transport system, permease component [Enterococcus faecium E1039] gi|293569787|ref|ZP_06680874.1| ABC-type amino acid transport system, permease component [Enterococcus faecium E1071] gi|291587535|gb|EFF19412.1| ABC-type amino acid transport system, permease component [Enterococcus faecium E1071] gi|291601820|gb|EFF32072.1| ABC-type amino acid transport system, permease component [Enterococcus faecium E1039] Length = 218 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 60/177 (33%), Positives = 101/177 (57%), Gaps = 7/177 (3%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W N+ + L + VT+ ++ S + S +IG VIR F + S I+ + Sbjct: 7 FSWMNI------RFLLEGLKVTVEVSLFSIIFSFLIGGLTGVIR-FANIPFFSKILGVVI 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++ LP IGI + F + + +LT+ SA +SEI R+ + ++PKGQ Sbjct: 60 DIIRNLPLLLIIFFTYFALPQIGIQMNIFWSAVAALTIFESAMLSEIFRAGLNAVPKGQM 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +A + GLT +T+R I+LPQ + + S+ IS++K TS+A I++PE+ A+ Sbjct: 120 EAGLSTGLTYVETMRTIVLPQAFKSMIPAIVSQLISLIKDTSLAVIISLPELSHQAR 176 >gi|148379137|ref|YP_001253678.1| ABC transporter, permease protein [Clostridium botulinum A str. ATCC 3502] gi|148288621|emb|CAL82702.1| ABC transporter, permease protein [Clostridium botulinum A str. ATCC 3502] Length = 221 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 97/166 (58%), Gaps = 3/166 (1%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS---FVAIIISLTLNFSAYISEIIRSS 113 I Y+ FR TPL+ QLF++++G P I S F A +I+LTLN +++++E +R+S Sbjct: 54 IFGLYITFFRATPLVAQLFILYFGFPCIIPALKSMTAFQATVIALTLNTASFMAETLRAS 113 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + S+ GQ +A Y++G+TR QT+ ++LPQ + + ++FI I+K +++ T+ + + Sbjct: 114 LESVDVGQLEACYSMGMTRYQTMMRVVLPQAFVVALPSIGNQFIGIIKGSALGFTVGLAD 173 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 I A+ + + + Y + +YL++ F IQ +E + + Sbjct: 174 IMAKAKMEAALSIRFFEAYLCVTLIYLVIVIFVEKIQRLLEKRIEK 219 >gi|315612797|ref|ZP_07887708.1| ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] gi|315314907|gb|EFU62948.1| ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] Length = 231 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 1/194 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A +TL IA + S ++G ++VIR + I S + Y+ + R T Sbjct: 10 IVEQYLPLYQKAFFLTLHIAVWGILGSFLVGLIVSVIR-HYRVPIFSQLATAYIELSRNT 68 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IGIV S V + L +Y++E RS + ++ + Q + AI Sbjct: 69 PLLIQLFFLYFGLPRIGIVLSSEVCATVGLIFLGGSYMAESFRSGLEAVSQTQHEIGLAI 128 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q R+++LPQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 129 GLTPVQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 188 Query: 189 LIIYCELAFVYLIL 202 I L YLI+ Sbjct: 189 DIALAMLVVAYLIM 202 >gi|288561032|ref|YP_003424518.1| amino acid ABC transporter permease protein [Methanobrevibacter ruminantium M1] gi|288543742|gb|ADC47626.1| amino acid ABC transporter permease protein [Methanobrevibacter ruminantium M1] Length = 217 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 83/127 (65%), Gaps = 4/127 (3%) Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDS---FVAIIISLTLNFSAYISEIIRSS 113 M Y+ I RGTPL++QL V+F+G +I G+ +A+II+ T+N++AY +EI R Sbjct: 50 MKAYISIMRGTPLMLQLIVVFFGPYYIFGMTLSRDYRMIAVIIAFTINYAAYFAEIFRGG 109 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SIP GQ++A+ +G TR QT IILPQ + +++E I+++K TS++ + IPE Sbjct: 110 IESIPNGQYEAAQVLGYTRVQTFFIIILPQVVKIVLPSITNEVITLVKDTSLSFVLAIPE 169 Query: 174 IFQTAQR 180 +F A++ Sbjct: 170 MFTVAKQ 176 >gi|222081149|ref|YP_002540512.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725828|gb|ACM28917.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 219 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 100/178 (56%), Gaps = 4/178 (2%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 I+ + ++GF +A+ R S + + Y+ + +G P+L+ LF+ +YGL G Sbjct: 27 IALIGGGLLGFAVALARTS-SIKAVRIAAGTYIQVIQGIPVLMILFLSYYGLSLAGFELP 85 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 +A S+T+ S Y++EI R I ++PK QW+AS ++ +TR Q R++ILPQ + S Sbjct: 86 PLIAAGASMTIYASGYLAEIWRGCIQAVPKQQWEASESLAMTRLQQYRYVILPQAVRISL 145 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 P + ++K+TS+ S I E+ + Q I + T+QP ++ +A +Y ++ CY Sbjct: 146 PPTVGFAVQVVKNTSITSIIGFVELARAGQLINNATFQPFRVFIAVAALYFVV---CY 200 >gi|147678666|ref|YP_001212881.1| ABC-type amino acid transport/signal transduction system [Pelotomaculum thermopropionicum SI] gi|146274763|dbj|BAF60512.1| ABC-type amino acid transport/signal transduction system [Pelotomaculum thermopropionicum SI] Length = 762 Score = 98.6 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 7/207 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+I+++ L+ + VT+ I+ +S V ++G I +R+ + + Y+ I R Sbjct: 542 NIILENRYLLILDGLKVTVLISILSTVFGTLLGALICFMRMS-PNKALRQPAKVYISILR 600 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTP+LV L +IFY + + D + +I+ +NF AY+SE+ R+ I S+ +GQ +A Sbjct: 601 GTPVLVLLMIIFY-VVFASVNIDPVLVAVIAFGMNFGAYVSEMFRTGIESVDRGQTEAGI 659 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G TR +T +I+LPQ EFIS++K TSV I + ++ + I S T+ Sbjct: 660 AMGFTRVKTFLYIVLPQAARNILPVYKGEFISLVKMTSVVGYIAVQDLTKAGDIIRSRTF 719 Query: 187 Q---PLIIYCELAFV--YLILTSFCYI 208 PL++ L F +L+ S Y+ Sbjct: 720 DAFFPLVMVAVLYFFISWLLSLSLGYV 746 >gi|66043567|ref|YP_233408.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63254274|gb|AAY35370.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] gi|330971845|gb|EGH71911.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 221 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 109/204 (53%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F ++ + LL A+ TL + I ++ + +G AV+R + + I Sbjct: 1 MAYHFDFTPVLQNLDVLLRGALF-TLELTAIGTLLGVSLGIVGAVVRAWKIQPFAT-IFA 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TP LVQLF IF+GLP +G+ + A ++++ +N AY +EI+R+ I +IPK Sbjct: 59 IYVELIRNTPFLVQLFFIFFGLPSLGVQITEWQAAVLAMVINLGAYSTEIVRAGIQAIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +AS A+ ++R + RH++L + LSS+ I ++ ++V S I E+ A Sbjct: 119 GQLEASAALAMSRYEAFRHVVLVPALGKVWPALSSQIIIVMLGSAVCSQIATEELSFFAN 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I S ++ Y +YL + Sbjct: 179 FIQSRNFRSFETYIVTTLIYLAMA 202 >gi|51244882|ref|YP_064766.1| amino acid ABC transporter, permease protein [Desulfotalea psychrophila LSv54] gi|50875919|emb|CAG35759.1| probable amino acid ABC transporter, permease protein [Desulfotalea psychrophila LSv54] Length = 228 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 61/224 (27%), Positives = 120/224 (53%), Gaps = 3/224 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + ++++D+ P +L A VTL I + + L +G A+ +++ + + Sbjct: 6 MLLQKLSVVLDALPYILQGA-GVTLIIVGGAMCLGLALGIPFALGQVY-GPRPVRYFISL 63 Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YVW FRG P+L+ +F+ ++G+ +G+ + + L + +AY S+I + +I+S+P Sbjct: 64 YVWFFRGVPILILMFLFYFGVFELLGLNLSALTTTALVLGMTSAAYQSQIFKGAILSLPH 123 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ A+ A+G+ R Q I I+LPQ + S S+E+ ILK +++A + ++F Sbjct: 124 GQIRAAEALGMNRPQAICSIVLPQAMRVSIPAWSNEYSIILKDSALAYVVGAMDMFTRTH 183 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + S TY+ L ++ + +YLI+T + ++E + Y+ Sbjct: 184 FVASRTYEHLTLFIFVGLLYLIITVIGVKVLARLEKKLHIPGYT 227 >gi|242309232|ref|ZP_04808387.1| glutamine ABC transporter permease GlnP [Helicobacter pullorum MIT 98-5489] gi|239524273|gb|EEQ64139.1| glutamine ABC transporter permease GlnP [Helicobacter pullorum MIT 98-5489] Length = 224 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 51/168 (30%), Positives = 101/168 (60%), Gaps = 1/168 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+ +TL ++ + S+++GF IAV++ F+ +S + Y+ + R TPLL+QLF ++Y Sbjct: 23 ALWLTLHLSFFGILFSIVLGFCIAVVQ-FYKLRFLSTLCQAYIELSRNTPLLIQLFFLYY 81 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP +G+ +S+ +I + +Y++E R+ + S+ K Q ++ ++GL+ Q + ++ Sbjct: 82 GLPQVGLHLESYTCALIGVVFLGGSYMAESFRAGLESVGKIQLESGRSLGLSEMQLVFYV 141 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 ILPQ++ S + + I +LK TSV S I + +I + ++ + Y+ Sbjct: 142 ILPQSLVISLPYIGANVIFLLKETSVVSAIALADILYVTKDLIGSYYK 189 >gi|71734665|ref|YP_275673.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|257482806|ref|ZP_05636847.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289650401|ref|ZP_06481744.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298488144|ref|ZP_07006181.1| Arginine/ornithine ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71555218|gb|AAZ34429.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157423|gb|EFH98506.1| Arginine/ornithine ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330988693|gb|EGH86796.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] gi|331012329|gb|EGH92385.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 232 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 115/207 (55%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N+I DS P L + ++ TL + IS L+ + ++R+ + +++ Y ++ Sbjct: 5 YNVIWDSLP-LYFGGLLTTLKLLAISLAFGLLAALPLGLMRVS-KNPWVNMPAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +SF+ ++ T+N SAY +EII S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFDAVRESFLWPWLSSATFCACLAFTINTSAYTAEIIAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G+++ + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + Y P Y YL LT Sbjct: 183 AARTVNAQFYLPFEAYVTAGVFYLCLT 209 >gi|327193781|gb|EGE60658.1| amino acid ABC transporter permease [Rhizobium etli CNPAF512] Length = 308 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 113/205 (55%), Gaps = 22/205 (10%) Query: 32 FVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYG----LPHI 84 VIS++ GF IA+ F + L+ Y FRGTPLL+QL++++YG LP + Sbjct: 103 LVISVVFGFIIAIGLAFAQVSGGRLTRLLARGYCTFFRGTPLLIQLWLLYYGVGSLLPMV 162 Query: 85 G---------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+ + F +S TLN++AY +E++R +++++PKG+ +A A GL+ + Sbjct: 163 PGIRQSLFWPILREGFFFAAVSFTLNYAAYEAEVLRGALLAVPKGELEAGRAFGLSPWKL 222 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPLIIY 192 R I LP+ I + ++ E + LK+T +A T+T+ +++ A ++ T Y+PL++ Sbjct: 223 TRRIWLPRAIRIALPTIAGEIVMQLKATPLAFTVTVMDLYAVANKVRQDTLLVYEPLLV- 281 Query: 193 CELAFVYLILTSFCYIIQIKIESSV 217 + YL LT+ + +E+ V Sbjct: 282 --VTLFYLALTAVIARVFRGLEAQV 304 >gi|237800639|ref|ZP_04589100.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023498|gb|EGI03555.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 220 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 104/185 (56%), Gaps = 6/185 (3%) Query: 34 ISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 IS+ IG I ++ F + ++ YV + R TP+LV + +I++ LP +GI D Sbjct: 30 ISIAIGCVIGLMNAFALLSRYRALRIVASIYVTVVRNTPILVLILLIYFALPGLGIRLDK 89 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 + I++L+L AY++E+ R+ ++SI KGQ +A AIGL Q +I +P + Sbjct: 90 LASFIVTLSLYAGAYLTEVFRAGLLSIHKGQREAGLAIGLGEWQVRAYITVPVMLRNVLP 149 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 LS+ FIS+ K TS+A+ I +PE+ A++I +Y+ + + +Y++ CY+I Sbjct: 150 ALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYRVIETWLVTTALYVVA---CYVIA 206 Query: 211 IKIES 215 + + + Sbjct: 207 MLLRA 211 >gi|307132299|ref|YP_003884315.1| amino acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine [Dickeya dadantii 3937] gi|306529828|gb|ADM99758.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Dickeya dadantii 3937] Length = 221 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 55/159 (34%), Positives = 89/159 (55%), Gaps = 8/159 (5%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEI 109 T++S + YV R TP +VQLF I +GLP +G+ + A ++++ +N AY +EI Sbjct: 49 KPTVVSRLWGLYVEAIRNTPFVVQLFFIVFGLPGLGLKLTAGQAALLAMLVNLGAYSTEI 108 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IR+ I PKGQW+A+ +GL+R QT +ILP + L S+ I ++ +SV S + Sbjct: 109 IRAGIQVTPKGQWEAARVLGLSRAQTFTRVILPPALQRIYPALVSQCIIVMLGSSVVSQV 168 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 + E+ A I S T+ L+F ++T+ CY+ Sbjct: 169 SFEELTFAANLIQSRTF--------LSFEVYLVTTLCYL 199 >gi|317153669|ref|YP_004121717.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] gi|316943920|gb|ADU62971.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] Length = 335 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 113/207 (54%), Gaps = 20/207 (9%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 + P L+ +++T+ I+ I+ +++G F + RI S+ + Y+ + RG+PL Sbjct: 119 EGRPGLMTEGMLITIEISIIAIAFGIVLGLFTGLARIS-SNPCLKWSAITYIELIRGSPL 177 Query: 71 LVQLFVIFY-------------GLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 LVQL + +Y GLP + G+ F I SL + AY++EI+R+ I S Sbjct: 178 LVQLLIAYYVIGTLINNLLVNAGLPQVPGMWFG-----IASLAIFAGAYVAEIVRAGIQS 232 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I KGQ +A+ ++G+T+ +R IILPQ PL+ +FIS++K +S+ I I E+ + Sbjct: 233 IHKGQSEAARSLGMTKAMAMRKIILPQAFRRILPPLAGQFISLIKDSSLLGVIAIRELTK 292 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 + V+T+ P +Y +YL++T Sbjct: 293 ATREAVTTSLMPYELYFVCGLMYLLVT 319 >gi|159184744|ref|NP_354405.2| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|159140032|gb|AAK87190.2| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 234 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 101/178 (56%), Gaps = 1/178 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 L++ I++T+ ++ + V+ +I + +R + TI + YV + R TP LVQL Sbjct: 15 DLIWRGILLTIGLSATAIVLGTMIAVALVAMRSLGNGTI-RFCVDSYVELLRNTPFLVQL 73 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F++F+GLP +G A + ++TLN SAY +EIIR+ + SI + Q +A ++ L+R Q Sbjct: 74 FMVFFGLPLVGFRMSGTQAALFAMTLNLSAYATEIIRAGVESIHRSQVEAGLSLSLSRLQ 133 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 R++++ LSS+F+ +L ++S+ S I++PE+ A I T++ Y Sbjct: 134 VFRYVVMKPAFAKIWPALSSQFVLMLLASSICSFISVPELSGAASIIEQRTFRSFETY 191 >gi|146294116|ref|YP_001184540.1| polar amino acid ABC transporter inner membrane subunit [Shewanella putrefaciens CN-32] gi|145565806|gb|ABP76741.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella putrefaciens CN-32] Length = 226 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 62/163 (38%), Positives = 95/163 (58%), Gaps = 3/163 (1%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 + YV + RGTP++VQL VI Y + + D A II+ LN AYISEIIR+ I ++ Sbjct: 65 NLYVGVIRGTPVVVQL-VILYFIVLSALDVDKITAAIIAFGLNSGAYISEIIRAGIQAVD 123 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A+ ++GL++ T++ IILPQ I L +EFI +LK T+V I ++ + Sbjct: 124 KGQTEAARSLGLSQAITMKSIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAG 183 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQH 220 + I S T++ + A +YL LT SF +++ K E + Q Sbjct: 184 EIIRSRTFEDSVPLFTCALIYLFLTYSFTFMLS-KFEKRLKQS 225 >gi|310640366|ref|YP_003945124.1| glutamine transport system permease protein [Paenibacillus polymyxa SC2] gi|309245316|gb|ADO54883.1| Probable glutamine transport system permease protein [Paenibacillus polymyxa SC2] Length = 482 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 119/220 (54%), Gaps = 4/220 (1%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 + W LI S P L+ + TL +S +++ ++G +++ + + I + Sbjct: 266 RSRW-ELISASLPALI-KGMGNTLLYTLVSLLVAFLLGLVFGFMKVSH-NKVFRGIATVF 322 Query: 62 VWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V +FRG PL+V F I++G+P + FVA +++L+LN AY++EIIR I SI G Sbjct: 323 VDVFRGIPLIVLAFFIYFGIPQALDFKMPLFVAAVLTLSLNAGAYVTEIIRGGIQSIDPG 382 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++GL + + IILPQ + ++ + LK TS+ S I + E+ Q+ + Sbjct: 383 QMEAARSLGLPYRTAMLKIILPQAVKIMIPSFINQLVITLKDTSILSVIGLVELTQSGKI 442 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I++ T+Q I+ +A +YLI+ + I ++E V + Sbjct: 443 IIARTFQSFDIWLVVAVMYLIVITVLTKISNRLEGRVRRG 482 >gi|296103993|ref|YP_003614139.1| histidine/lysine/arginine/ornithine transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058452|gb|ADF63190.1| histidine/lysine/arginine/ornithine transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 238 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 115/213 (53%), Gaps = 11/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S V+ I+ F+A+ R+ ++ I + + ++FRGTPL VQL V Sbjct: 20 FTGVAITLWLLISSVVMGGILAVFLAIGRVS-NNKFIQFPIWLFTYVFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTEMLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPYGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSSVKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P + A +YLI++ + K E QH Sbjct: 199 PFTAFGIAAVLYLIISYVLISLFRKAEKRWLQH 231 >gi|70733738|ref|YP_257378.1| glutamine/glutamate ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68348037|gb|AAY95643.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 219 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 56/193 (29%), Positives = 108/193 (55%), Gaps = 3/193 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M L++ S PQL A TL I+ +S S + G V+R ++ + + Sbjct: 1 MASSGLELLLVSLPQLARGA-AQTLSISLLSIAFSTLGGVLYGVLRSL-QRKVLDVPLRI 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ +FR P+LV L+++F+G P G+ SF ++ L+L ++ + E++R ++ S+P+ Sbjct: 59 YLELFRAIPVLVWLYLLFFGFPIFFGLSIPSFTCAVLVLSLWGASEVGEVVRGALQSLPR 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A +IGL+ Q +++LPQ + P + + I+K++S+A I + ++ + Q Sbjct: 119 GQREAGLSIGLSGAQLYGYVLLPQALKRMTPPTINVYTRIIKTSSLAVLIGVVDVIKVGQ 178 Query: 180 RIVSTTYQPLIIY 192 +I+ TY+ ++IY Sbjct: 179 QIIERTYESVLIY 191 >gi|33597552|ref|NP_885195.1| glutamine ABC transporter permease protein [Bordetella parapertussis 12822] gi|33573980|emb|CAE38299.1| glutamine transport system permease protein [Bordetella parapertussis] Length = 219 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 65/206 (31%), Positives = 114/206 (55%), Gaps = 5/206 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++W ++I + P LL ++ T+ I V ++G I V R + ++ + Sbjct: 1 MDFDW-SVIGTALPNLLDGTLM-TVKITFWGLVGGFVVGALIGVARAY-GPLWLAGLAQV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV + RGTP++VQ+ I++ LP + G+ D A I +L +N AYI+EI+R S++S+ Sbjct: 58 YVAVIRGTPIVVQVMFIYFALPLMIEGMRVDVVAAAIATLIINSGAYIAEIVRGSLLSVH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL + + +II P PL ++ I LK +S+ I + E+ + Sbjct: 118 KGLKEAGQAMGLPFYKILLYIIGPVAFRRMIPPLGNQCIISLKDSSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTS 204 Q I+++ ++ + I+ +A VYLILT Sbjct: 178 QEIMASNFRAVEIWSAVAIVYLILTG 203 >gi|256059928|ref|ZP_05450113.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella neotomae 5K33] gi|261323898|ref|ZP_05963095.1| ABC transporter [Brucella neotomae 5K33] gi|261299878|gb|EEY03375.1| ABC transporter [Brucella neotomae 5K33] Length = 241 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 56/151 (37%), Positives = 90/151 (59%), Gaps = 1/151 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV FR P +V L++ FYGLP +G+ + I+L S+Y +EIIR +I+++PKG Sbjct: 59 YVEWFRNIPFIVVLYLFFYGLPFMGVRLPESIVGTIALAFFASSYFAEIIRGAILAVPKG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ AIG++ Q + I+ PQT+ P ++ IS++K TSV STIT+ E+ Sbjct: 119 QMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETSVLSTITVAELTYQGLV 178 Query: 181 IVSTTYQPLIIYCELAFVYLILTS-FCYIIQ 210 I T+ P I+ A +Y ++T+ F Y++ Sbjct: 179 IQGETFAPFEIFLTTAAIYWMITAIFAYLMH 209 >gi|218458226|ref|ZP_03498317.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli Kim 5] Length = 202 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 115/204 (56%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F + D P+LL+ ++ T+ +A +++L+IG R + +L++ Sbjct: 1 MGYTFDFGAVFDRAPELLWGSLG-TMGLALAGMLLALLIGVLGVAARTSKIPLVRALVIG 59 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 F V + R TP LVQ+F I++ LP +GI + V II+L +N AY EIIR + SI K Sbjct: 60 F-VEVVRNTPFLVQIFFIYFALPLMGIRLNPTVTAIIALGINGGAYAIEIIRGGVESISK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A +A+GL + R I+L + L+S+F+ + +TSV ++I E+ AQ Sbjct: 119 GQIEAGFALGLHKGDVFRLIVLKPALRAIYPSLTSQFVMLTLTTSVCTSIAAYELTSAAQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 RI S T++ +Y + +YL+++ Sbjct: 179 RIESDTFRSFEVYFTVTAIYLVIS 202 >gi|42779787|ref|NP_977034.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|206978169|ref|ZP_03239051.1| amino acid ABC transporter, permease protein [Bacillus cereus H3081.97] gi|42735704|gb|AAS39642.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|206743641|gb|EDZ55066.1| amino acid ABC transporter, permease protein [Bacillus cereus H3081.97] Length = 218 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 104/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ + V R PL++ F+ ++ LP IGI Sbjct: 25 SVIALIGSFILGIILAVMRIA-PIRILNWLGAAIVEFVRNIPLVLIAFIFYFALPVIGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + H++LPQ + Sbjct: 84 LNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQAMYHVVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGMDLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|297562617|ref|YP_003681591.1| polar amino acid ABC transporter inner membrane subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847065|gb|ADH69085.1| polar amino acid ABC transporter, inner membrane subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 310 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 69/253 (27%), Positives = 123/253 (48%), Gaps = 34/253 (13%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W + F + + + +TL +S VI +++G +AV+R+ + ++S + Y Sbjct: 48 FNWPFMFDHMFSEPVVRGVWITLSATVLSMVIGVVLGIVLAVMRLSGNPVLVS-VSWLYT 106 Query: 63 WIFRGTPLLVQLFVIF------------------YGLPHIGIVFDS-------------F 91 W FRG P LV L V+F Y +P +G+ D+ + Sbjct: 107 WFFRGVPRLV-LAVLFGNIAILYQTIEFGLPFDNYWMPWLGLEGDARFFEIDTRTVLSGY 165 Query: 92 VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP 151 A +++L+L+ AY++EIIR+ + S+ KGQ +A+ A+G+ + + +R I LPQ + P Sbjct: 166 TAGLLALSLSEGAYMAEIIRAGLQSVNKGQTEAAQALGMGKGKVLRRITLPQAMRVVVPP 225 Query: 152 LSSEFISILKSTSVASTITIP-EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 +E I++LK T++ + + + E+F Q I S TYQ + YL +TS + Q Sbjct: 226 TGNETIAMLKDTALLAYVPVTIELFYQLQAIGSRTYQIFPMLVAACLWYLAITSVLMVGQ 285 Query: 211 IKIESSVTQHTYS 223 +E Y Sbjct: 286 YFLERRFNPGQYG 298 >gi|170761003|ref|YP_001786791.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A3 str. Loch Maree] gi|169407992|gb|ACA56403.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A3 str. Loch Maree] Length = 221 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 84/132 (63%), Gaps = 7/132 (5%) Query: 62 VWI--FRGTPLLVQLFVIFYGL----PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 +W+ FRGTPL+ QLF +++G+ P + + D+ A II L N SAY+SE +R +I Sbjct: 57 IWVSFFRGTPLIAQLFFLYFGIVQLIPSLKNM-DAMTAAIIGLGFNASAYMSETLRGAIS 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ KGQ +AS +IG+T Q++R I+ PQ + LS+ F+ I+K +++A T+ + EI Sbjct: 116 SVDKGQIEASLSIGMTSIQSMRRIVFPQAARVALPALSNSFVDIIKGSALAFTLGVVEIM 175 Query: 176 QTAQRIVSTTYQ 187 AQ +++Y+ Sbjct: 176 AVAQSEGASSYR 187 >gi|46579088|ref|YP_009896.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|46448501|gb|AAS95155.1| ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio vulgaris str. Hildenborough] Length = 271 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 91/149 (61%), Gaps = 3/149 (2%) Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 L+ YV R TPLLVQLFV ++ + P G+ + +++L + AY++EI+R+ I Sbjct: 107 LVARLYVESVRNTPLLVQLFVTYFAIAPVFGL--GRMASAVMALGVFEGAYMAEILRAGI 164 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++P+GQW+AS ++G+ T +ILPQ + + PL+ + +S++K +S+AS I I E+ Sbjct: 165 AAVPQGQWEASRSLGMDEPGTYVQVILPQALRRALPPLTGQAVSLVKDSSLASAIAIHEL 224 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 AQ I++ T+ ++ A +YL +T Sbjct: 225 TMQAQTIIAETFLTFEVWLLTAAIYLCVT 253 >gi|304407618|ref|ZP_07389270.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] gi|304343569|gb|EFM09411.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] Length = 236 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 73/218 (33%), Positives = 118/218 (54%), Gaps = 20/218 (9%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 MK + + I + QLL A+ T+ I +S V L+IG +A+IRI S +++ Sbjct: 1 MKLD-LSFIWQALLQLL-TAVPTTIAITAVSIVCGLVIGTVVALIRIN-SVPVLNAAAVA 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLP--------HIGIVFDS-------FVAIIISLTLNFSAY 105 YV RGTP+L L ++++GLP + G F S F I S+T AY Sbjct: 58 YVTFIRGTPMLTHLLLVYFGLPFVIDAICTNFGWSFRSVSIPMIGFAYIAFSITAG--AY 115 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 +SE++RS ++++ KGQ +A+YA+G+T Q IR I+ PQ LS+ IS+L +++ Sbjct: 116 LSEVVRSGLLAVDKGQIEAAYAVGMTTTQAIRRIVFPQAFAILLPNLSNGTISMLHGSTL 175 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 A T+++ +I +Q I S+ ++ Y A +Y LT Sbjct: 176 AFTVSVVDINAKSQIIASSNWKFFESYIAAAVIYWGLT 213 >gi|270292250|ref|ZP_06198464.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] gi|270279296|gb|EFA25139.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] Length = 226 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 1/194 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A +TL IA + S ++G ++VIR + I S + Y+ + R T Sbjct: 5 IVEQYLPLYQKAFFLTLHIAVWGILGSFLVGLIVSVIR-HYRVPIFSQLATAYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IGIV S V + L +Y++E RS + ++ + Q + AI Sbjct: 64 PLLIQLFFLYFGLPRIGIVLSSEVCATVGLIFLGGSYMAESFRSGLEAVSQTQHEIGLAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q R+++LPQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 124 GLTPVQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183 Query: 189 LIIYCELAFVYLIL 202 I L YLI+ Sbjct: 184 DIALAMLVVAYLIM 197 >gi|253581220|ref|ZP_04858477.1| polar amino acid ABC transporter [Ruminococcus sp. 5_1_39B_FAA] gi|251847497|gb|EES75470.1| polar amino acid ABC transporter [Ruminococcus sp. 5_1_39BFAA] Length = 225 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 66/195 (33%), Positives = 111/195 (56%), Gaps = 13/195 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ + VT+ IA IS V S+I+GF + ++ + + II I Y+ I R P LV LF+ Sbjct: 18 LWQGLWVTIRIALISMVFSIILGFLLGMV-MNIPNKIIKFICRIYLEIVRIMPQLVLLFL 76 Query: 77 IFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +++G H+G+ A +I T +A + +++RS++ISIPK Q+D+ Y +GL + Q Sbjct: 77 VYFGAAKHLGMNLSGETAAVIVFTFWGTAEMGDLVRSALISIPKHQYDSGYGLGLNKWQV 136 Query: 136 IRHIILPQTITT---SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY-----Q 187 +IILPQTI SAV L + I K+TS+ + I + E+ + ++I+ + Sbjct: 137 YLYIILPQTIRRLLPSAVNLLTRMI---KTTSLVALIGVVEVLKVGKQIIDASRYTNPTA 193 Query: 188 PLIIYCELAFVYLIL 202 L +Y + F+Y I+ Sbjct: 194 ALWVYGAVFFMYFII 208 >gi|237807675|ref|YP_002892115.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] gi|237499936|gb|ACQ92529.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] Length = 231 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 104/192 (54%), Gaps = 11/192 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I +P L ++ T + +S +I L I + ++R S ++ Y++ F Sbjct: 4 FSIIAGEWPTYL-EGLINTSWLVTVSLIIGLCIAVPVGILRSSQS-ALLRYPAWAYIYFF 61 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+I+YG + S+ +++ LN AY +EI+R SI Sbjct: 62 RGTPLLVQLFIIYYGAGQWQWLQQSWAWEWFQEAWFCSLLAFALNTGAYTAEIVRGSIQM 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKG+ +A+ + G++R Q +RHIILP + + S+E I +L +S+A IT+ ++ Sbjct: 122 IPKGELEAAASFGMSRWQMLRHIILPSALRRALPAYSNEVILMLHGSSIAGVITVVDLTG 181 Query: 177 TAQRIVSTTYQP 188 A+ I + Y P Sbjct: 182 AARIINARYYTP 193 >gi|169829526|ref|YP_001699684.1| amino-acid ABC transporter permease [Lysinibacillus sphaericus C3-41] gi|168994014|gb|ACA41554.1| Probable amino-acid ABC transporter permease protein [Lysinibacillus sphaericus C3-41] Length = 235 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 111/203 (54%), Gaps = 14/203 (6%) Query: 34 ISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI--GIV---- 87 + ++IG +A +RI ++ ++FYV FRGTP+++ + ++ +GLP + G+V Sbjct: 32 LGIVIGIMVAFVRIK-QIKFLTPFLNFYVSFFRGTPIIMHIMLVDFGLPMLVDGVVNTFH 90 Query: 88 --FDS-----FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 F S +I++ T + AY SEIIRS I+S+PKGQ +A+YAIGLT Q +R + Sbjct: 91 LSFQSSSIPILFFVILAFTFSAGAYASEIIRSGILSVPKGQLEAAYAIGLTFTQAMRRYV 150 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LPQ S ++ FI L +TS+A ++I E+ A + S + L + + +Y Sbjct: 151 LPQAFGKSIPNFTNVFIGFLHATSLAFFLSIKELTGVANIVASVNLKFLEAFIAVGIIYW 210 Query: 201 ILTSFCYIIQIKIESSVTQHTYS 223 ++ I +IE V ++ S Sbjct: 211 GISIITESISHRIEKRVMAYSKS 233 >gi|160941893|ref|ZP_02089220.1| hypothetical protein CLOBOL_06789 [Clostridium bolteae ATCC BAA-613] gi|158435390|gb|EDP13157.1| hypothetical protein CLOBOL_06789 [Clostridium bolteae ATCC BAA-613] Length = 226 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 119/218 (54%), Gaps = 6/218 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 MK+ W + + P + + + VTL + IS V SL+IG A+I ++ +S ++ Sbjct: 6 MKFNW-SYFFQTLPYIA-SKLNVTLTLTIISAVFSLVIGMVFAIIS-YYKVKGVSQVLKI 62 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 ++ RGTP+ QLF +YGL ++ + VA+ + ++LN A++SE IR ++IS+ Sbjct: 63 WISFVRGTPVAAQLFFFYYGLANLSSLILNMSPTVAVAVIMSLNMGAFVSESIRGALISV 122 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 +GQ +A+ A G+T Q I++PQ I + PL ++ I++ K +S+A + + ++ Sbjct: 123 DEGQREAAMAFGMTGFQMTIRIVIPQAIRVALPPLFNDLINLFKMSSLAFLVGVRDVMGA 182 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 A+ + T+Q Y + +Y ++T IQ +E Sbjct: 183 AKIEGANTFQFFECYACVMLIYWVITLILTAIQKVLEK 220 >gi|146318682|ref|YP_001198394.1| amino acid ABC transporter periplasmic protein [Streptococcus suis 05ZYH33] gi|145689488|gb|ABP89994.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus suis 05ZYH33] Length = 179 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 55/163 (33%), Positives = 93/163 (57%), Gaps = 7/163 (4%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +V + RG PL++ IF+G+P++ + FVA I+L+LN AYI+EI+R Sbjct: 15 FVDVVRGIPLMIVAAFIFWGIPNLIESMTGQQSPINDFVAGTIALSLNSGAYIAEIVRGG 74 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++P GQ +AS ++G++ T+R IILPQ ++F+ LK T++ S I + E Sbjct: 75 IQAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTTIISAIGLVE 134 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 +FQ + I++ YQ +Y LA +YL++ + + K+E Sbjct: 135 LFQAGKIIIARNYQSFRMYAILAIIYLVVITLLTRLARKLEKG 177 >gi|90419463|ref|ZP_01227373.1| putative ABC transporter permease protein [Aurantimonas manganoxydans SI85-9A1] gi|90336400|gb|EAS50141.1| putative ABC transporter permease protein [Aurantimonas manganoxydans SI85-9A1] Length = 224 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 109/170 (64%), Gaps = 2/170 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++++ +P LL + T+ + +S V+ L+ G +A++RI+ I+ ++ YV +FR Sbjct: 11 DVLLRYYP-LLLEGLWRTIALGALSIVLGLVGGLVLAMMRIY-GHPILKFLVVAYVDVFR 68 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P+LV L +++Y LP +GI +F + +LT+ SAY +EI R+ I +IP+GQ++A+ Sbjct: 69 ALPVLVWLVIVYYALPFVGIRLSAFASATTALTMISSAYTAEIYRAGIEAIPRGQFEAAQ 128 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +IGL++ +R ++LPQ I PL++ I+++K T++AS + +P++ + Sbjct: 129 SIGLSQWFLMRDVVLPQAIRIVIPPLTNNSINVMKDTALASVVALPDLLK 178 >gi|293397048|ref|ZP_06641322.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] gi|291420519|gb|EFE93774.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] Length = 219 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 95/156 (60%), Gaps = 2/156 (1%) Query: 64 IFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI G Sbjct: 61 VIRGTPIVVQVMFIYFALPMAFSDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHSGF 120 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A A+GL+R++TIR++++P + PL +++I +K TS+ I + E+ + Q I Sbjct: 121 REAGLALGLSRRETIRYVVMPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEI 180 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 ++ ++ L I+ +A +YLI+T + ++E + Sbjct: 181 IAGNFRALEIWSAVAVIYLIITLVLSFVLRRLERRM 216 >gi|163751503|ref|ZP_02158726.1| amino acid ABC transporter, permease protein [Shewanella benthica KT99] gi|161328624|gb|EDP99774.1| amino acid ABC transporter, permease protein [Shewanella benthica KT99] Length = 225 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 57/165 (34%), Positives = 100/165 (60%), Gaps = 9/165 (5%) Query: 59 HFYVWIFRGTPLLVQLFVIFY---GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + YV + RGTP+++QL ++++ +G++ A II+ LN AYISEIIR+ I Sbjct: 64 NLYVGVIRGTPVVIQLVILYFIVLSALDVGVIG----AAIIAFGLNSGAYISEIIRAGIQ 119 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ KGQ +A+ ++GL+++QT++ +ILPQ I L +EFI +LK T+V I ++ Sbjct: 120 AVDKGQTEAARSLGLSQRQTMQEVILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLM 179 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQ 219 + + I S T++ + A +YL+LT F +++ K+E + Q Sbjct: 180 RAGEIIRSRTFEAEVPLFTCALIYLVLTYGFTFMLS-KLELRLKQ 223 >gi|154484326|ref|ZP_02026774.1| hypothetical protein EUBVEN_02039 [Eubacterium ventriosum ATCC 27560] gi|149734803|gb|EDM50720.1| hypothetical protein EUBVEN_02039 [Eubacterium ventriosum ATCC 27560] Length = 346 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 126/218 (57%), Gaps = 18/218 (8%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 +L+ A +T+ + + ++ +I+G F+A+ +I + +I+ I YV+ FRGTPLL+Q Sbjct: 127 ENMLHGA-KLTISLTTFTVILGVILGVFLALGKIS-KNRVINKIASAYVFFFRGTPLLIQ 184 Query: 74 LFVIFYGLPHI---------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 LFV+++ +P + G+ +F+A +I+ LN AY +EI+R++I SI Sbjct: 185 LFVVYFTVPGLFGFAWRDFFSAADADGVYKGAFIAALIAFALNSGAYCAEIVRAAIQSID 244 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ++A+ A+G+ QT+ I++PQ+I + +EFI +LK S+ I++ +I + Sbjct: 245 KGQYEAAKALGMNYSQTMSLIVIPQSIRRMLPAICNEFIMVLKDASLVFAISLMDITTIS 304 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 I+++ I++ +YLI+T+F I KIE Sbjct: 305 NSIMNSD-GSYIVFIPALIIYLIITAFFTYIFNKIEKK 341 >gi|17986396|ref|NP_539030.1| asparagine transport system permease protein [Brucella melitensis bv. 1 str. 16M] gi|23502804|ref|NP_698931.1| amino acid ABC transporter permease [Brucella suis 1330] gi|62290806|ref|YP_222599.1| amino acid ABC transporter permease [Brucella abortus bv. 1 str. 9-941] gi|82700716|ref|YP_415290.1| binding-protein dependent transport system inner membrane protein [Brucella melitensis biovar Abortus 2308] gi|161619873|ref|YP_001593760.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella canis ATCC 23365] gi|189025022|ref|YP_001935790.1| Binding-protein-dependent transport systems inner membrane component [Brucella abortus S19] gi|225628153|ref|ZP_03786188.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti str. Cudo] gi|225853391|ref|YP_002733624.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease [Brucella melitensis ATCC 23457] gi|237816316|ref|ZP_04595309.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308 A] gi|254690094|ref|ZP_05153348.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella abortus bv. 6 str. 870] gi|254694582|ref|ZP_05156410.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella abortus bv. 3 str. Tulya] gi|254696207|ref|ZP_05158035.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella abortus bv. 2 str. 86/8/59] gi|254700594|ref|ZP_05162422.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella suis bv. 5 str. 513] gi|254704964|ref|ZP_05166792.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella suis bv. 3 str. 686] gi|254707523|ref|ZP_05169351.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella pinnipedialis M163/99/10] gi|254708941|ref|ZP_05170752.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella pinnipedialis B2/94] gi|254731125|ref|ZP_05189703.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella abortus bv. 4 str. 292] gi|256030467|ref|ZP_05444081.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella pinnipedialis M292/94/1] gi|256045555|ref|ZP_05448438.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella melitensis bv. 1 str. Rev.1] gi|256158451|ref|ZP_05456349.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti M490/95/1] gi|256253871|ref|ZP_05459407.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti B1/94] gi|256258347|ref|ZP_05463883.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella abortus bv. 9 str. C68] gi|256263128|ref|ZP_05465660.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 2 str. 63/9] gi|260169375|ref|ZP_05756186.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella sp. F5/99] gi|260546068|ref|ZP_05821808.1| binding-protein-dependent transport system inner membrane component [Brucella abortus NCTC 8038] gi|260562865|ref|ZP_05833351.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 1 str. 16M] gi|260567563|ref|ZP_05838033.1| binding-protein-dependent transport system inner membrane component [Brucella suis bv. 4 str. 40] gi|260755632|ref|ZP_05867980.1| ABC transporter [Brucella abortus bv. 6 str. 870] gi|260758857|ref|ZP_05871205.1| ABC transporter [Brucella abortus bv. 4 str. 292] gi|260760581|ref|ZP_05872924.1| ABC transporter [Brucella abortus bv. 2 str. 86/8/59] gi|260884657|ref|ZP_05896271.1| ABC transporter [Brucella abortus bv. 9 str. C68] gi|261214906|ref|ZP_05929187.1| amino acid ABC transporter, permease [Brucella abortus bv. 3 str. Tulya] gi|261221007|ref|ZP_05935288.1| ABC transporter [Brucella ceti B1/94] gi|261315004|ref|ZP_05954201.1| ABC transporter [Brucella pinnipedialis M163/99/10] gi|261316439|ref|ZP_05955636.1| ABC transporter [Brucella pinnipedialis B2/94] gi|261751102|ref|ZP_05994811.1| ABC transporter [Brucella suis bv. 5 str. 513] gi|261755664|ref|ZP_05999373.1| ABC transporter [Brucella suis bv. 3 str. 686] gi|261758896|ref|ZP_06002605.1| binding-protein-dependent transport system inner membrane component [Brucella sp. F5/99] gi|265987509|ref|ZP_06100066.1| ABC transporter [Brucella pinnipedialis M292/94/1] gi|265991982|ref|ZP_06104539.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str. Rev.1] gi|265996967|ref|ZP_06109524.1| ABC transporter [Brucella ceti M490/95/1] gi|297247190|ref|ZP_06930908.1| polar amino acid transport system permease [Brucella abortus bv. 5 str. B3196] gi|17981988|gb|AAL51294.1| asparagine transport system permease protein [Brucella melitensis bv. 1 str. 16M] gi|23348827|gb|AAN30846.1| amino acid ABC transporter, permease protein [Brucella suis 1330] gi|62196938|gb|AAX75238.1| amino acid ABC transporter, permease protein [Brucella abortus bv. 1 str. 9-941] gi|82616817|emb|CAJ11912.1| Binding-protein-dependent transport systems inner membrane component [Brucella melitensis biovar Abortus 2308] gi|161336684|gb|ABX62989.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365] gi|189020594|gb|ACD73316.1| Binding-protein-dependent transport systems inner membrane component [Brucella abortus S19] gi|225616978|gb|EEH14025.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti str. Cudo] gi|225641756|gb|ACO01670.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella melitensis ATCC 23457] gi|237788383|gb|EEP62598.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308 A] gi|260096175|gb|EEW80051.1| binding-protein-dependent transport system inner membrane component [Brucella abortus NCTC 8038] gi|260152881|gb|EEW87973.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 1 str. 16M] gi|260157081|gb|EEW92161.1| binding-protein-dependent transport system inner membrane component [Brucella suis bv. 4 str. 40] gi|260669175|gb|EEX56115.1| ABC transporter [Brucella abortus bv. 4 str. 292] gi|260671013|gb|EEX57834.1| ABC transporter [Brucella abortus bv. 2 str. 86/8/59] gi|260675740|gb|EEX62561.1| ABC transporter [Brucella abortus bv. 6 str. 870] gi|260874185|gb|EEX81254.1| ABC transporter [Brucella abortus bv. 9 str. C68] gi|260916513|gb|EEX83374.1| amino acid ABC transporter, permease [Brucella abortus bv. 3 str. Tulya] gi|260919591|gb|EEX86244.1| ABC transporter [Brucella ceti B1/94] gi|261295662|gb|EEX99158.1| ABC transporter [Brucella pinnipedialis B2/94] gi|261304030|gb|EEY07527.1| ABC transporter [Brucella pinnipedialis M163/99/10] gi|261738880|gb|EEY26876.1| binding-protein-dependent transport system inner membrane component [Brucella sp. F5/99] gi|261740855|gb|EEY28781.1| ABC transporter [Brucella suis bv. 5 str. 513] gi|261745417|gb|EEY33343.1| ABC transporter [Brucella suis bv. 3 str. 686] gi|262551435|gb|EEZ07425.1| ABC transporter [Brucella ceti M490/95/1] gi|263003048|gb|EEZ15341.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str. Rev.1] gi|263093030|gb|EEZ17180.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 2 str. 63/9] gi|264659706|gb|EEZ29967.1| ABC transporter [Brucella pinnipedialis M292/94/1] gi|297174359|gb|EFH33706.1| polar amino acid transport system permease [Brucella abortus bv. 5 str. B3196] gi|326409954|gb|ADZ67019.1| Binding-protein-dependent transport systems inner membrane component [Brucella melitensis M28] gi|326539670|gb|ADZ87885.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella melitensis M5-90] Length = 240 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 56/151 (37%), Positives = 90/151 (59%), Gaps = 1/151 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV FR P +V L++ FYGLP +G+ + I+L S+Y +EIIR +I+++PKG Sbjct: 58 YVEWFRNIPFIVVLYLFFYGLPFMGVRLPESIVGTIALAFFASSYFAEIIRGAILAVPKG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ AIG++ Q + I+ PQT+ P ++ IS++K TSV STIT+ E+ Sbjct: 118 QMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETSVLSTITVAELTYQGLV 177 Query: 181 IVSTTYQPLIIYCELAFVYLILTS-FCYIIQ 210 I T+ P I+ A +Y ++T+ F Y++ Sbjct: 178 IQGETFAPFEIFLTTAAIYWMITAIFAYLMH 208 >gi|69246347|ref|ZP_00603903.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Enterococcus faecium DO] gi|258616329|ref|ZP_05714099.1| Glutamine transport system permease protein [Enterococcus faecium DO] gi|68195300|gb|EAN09751.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Enterococcus faecium DO] Length = 218 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 60/177 (33%), Positives = 101/177 (57%), Gaps = 7/177 (3%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W N+ + L + VT+ ++ S + S +IG VIR F + S I+ + Sbjct: 7 FSWMNI------RFLLEGLKVTVEVSLFSIIFSFLIGGLAGVIR-FANIPFFSKILGVVI 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++ LP IGI + F + + +LT+ SA +SEI R+ + ++PKGQ Sbjct: 60 DIIRNLPLLLIIFFTYFALPQIGIQMNIFWSAVAALTIFESAMLSEIFRAGLNAVPKGQM 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +A + GLT +T+R I+LPQ + + S+ IS++K TS+A I++PE+ A+ Sbjct: 120 EAGLSTGLTYVETMRTIVLPQAFKSMIPAIVSQLISLIKDTSLAVIISLPELSHQAR 176 >gi|26990306|ref|NP_745731.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida KT2440] gi|148547398|ref|YP_001267500.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida F1] gi|24985260|gb|AAN69195.1|AE016554_2 amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] gi|148511456|gb|ABQ78316.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida F1] gi|313498468|gb|ADR59834.1| Polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida BIRD-1] Length = 236 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 100/170 (58%), Gaps = 11/170 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLP-------HIGIVF---DSFVAIIISLTLNFSAYISEII 110 YV+ FRG+PLL QLF+++YGL +G+ + D++ +++ TLN +AY +EI Sbjct: 66 YVYFFRGSPLLAQLFLLYYGLGSLKGFWQDVGLWWFFRDAWFCTLLAFTLNTAAYQAEIF 125 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R S++++ GQ +A+ A+ L R T +ILPQ++ + PL +E I ++K++++AS +T Sbjct: 126 RGSLMAVAPGQHEAARALNLKRSTTFFKVILPQSLLVAIGPLGNELILMIKASAIASLVT 185 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I ++ + S ++ IY A +YL++ + +E+ + +H Sbjct: 186 IYDLMGVTKLAFSRSFD-FQIYLWAAVLYLVIVELVRRLLKHLEARLGRH 234 >gi|307255256|ref|ZP_07537071.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259691|ref|ZP_07541414.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306861805|gb|EFM93784.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866231|gb|EFM98096.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 223 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 115/211 (54%), Gaps = 8/211 (3%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L+Y+A ++TL +A S ++ L++ V+ +S ++ + RG P ++ + Sbjct: 8 LIYSATLMTLGLALTSLIVGLLLSMLFVVLETS-KQPCVSKPTSIFLALLRGLPEILVVL 66 Query: 76 VIFYGLPHI-----G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +IF+G + G + F +F +++L+L FSAY S+ +R +I ++P GQW++ A+ Sbjct: 67 LIFFGSTELVEKITGEYVEFSAFSCGVLALSLIFSAYASQSLRGAIQAVPNGQWESGAAL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+R T II+PQ + LS++++ +LK T++ S I + ++ + I + +QP Sbjct: 127 GLSRAHTFLKIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLMRQTDLINTNEHQP 186 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 Y A +YL +T +I ++E T+ Sbjct: 187 FTWYGLAALIYLAITLISQVIIARLEKRFTR 217 >gi|116672451|ref|YP_833384.1| polar amino acid ABC transporter inner membrane subunit [Arthrobacter sp. FB24] gi|116612560|gb|ABK05284.1| amino acid ABC transporter membrane protein, PAAT family [Arthrobacter sp. FB24] Length = 352 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 119/233 (51%), Gaps = 22/233 (9%) Query: 2 KYEWFNLIIDSF-PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++EW ++ F Q + +V TL + IS + ++GF +A++R+ S ++S+ F Sbjct: 84 RWEW-GVVAQWFTAQSVVNGLVETLKLTAISGALGFVLGFILALMRLSASPLLVSVSWTF 142 Query: 61 YVWIFRGTPLLVQLFVIFY----------GLPHIGIVF---------DSFVAIIISLTLN 101 WIFR TPLLVQ+ + + G+P + F F A ++ LTLN Sbjct: 143 -SWIFRSTPLLVQMLLWYNLGYLYEKISLGIPFTDVRFFEVQTTTLISQFAAAVLGLTLN 201 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 +AY +EIIR I+S+ +GQ +A+ A+G+ + I+LPQ + +E I ++K Sbjct: 202 QAAYSAEIIRGGILSVDQGQLEAAAALGIPAWRRSTRIVLPQAMRAILPTAFNEIIGLVK 261 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+ + E+F T Q I + T Q L + Y+++TS + Q IE Sbjct: 262 GTSIVYVLAYSELFYTVQVIYNRTQQVLPLLLVATLWYVVITSVLSVFQYYIE 314 >gi|90410450|ref|ZP_01218466.1| Putative arginine ABC transporter, permease protein [Photobacterium profundum 3TCK] gi|90328691|gb|EAS44975.1| Putative arginine ABC transporter, permease protein [Photobacterium profundum 3TCK] Length = 223 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 57/163 (34%), Positives = 92/163 (56%), Gaps = 10/163 (6%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSI 114 +F GTPLLVQ+F+I+YG V +SF+ +++L LN +AY +++ + + Sbjct: 55 LFTGTPLLVQIFLIYYGPGQFEAVRESFLWNWLSQPWFCAMLALALNTAAYSTQLFKGAF 114 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IP GQW A A+G+ + T+R ++LP I + S+E I + K TS+ASTITI ++ Sbjct: 115 NAIPSGQWQACRALGMDKVATLR-VLLPFAIRRAIPAYSNEVILVFKGTSLASTITIMDL 173 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 AQRI + TY LI++ YL + +I ++E Sbjct: 174 MGYAQRINAQTYDTLIVFSVAGVFYLAVNGILTLIFRQVEKKA 216 >gi|298294200|ref|YP_003696139.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296930711|gb|ADH91520.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 226 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 108/195 (55%), Gaps = 2/195 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ S+P LL + +T+ + IS ++ +I+G A + + + YV FR T Sbjct: 9 VLHSWPSLLNG-LGMTVLLTLISCLLGVILGTLCAWASLK-GPKPLRWFIRAYVEFFRNT 66 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P L Q+F IF+GLP +G+ D F A +++LT+N +AY EIIR+ I + P GQ++A+ ++ Sbjct: 67 PFLGQIFFIFFGLPALGLRMDPFTAALVALTINLTAYACEIIRAGIEATPAGQFEAASSL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL Q II+P ++S+ + +L ++++ S I++ E+ A I S T++ Sbjct: 127 GLKPAQAFFLIIIPPAFQRVWPAMTSQLVIMLLASALCSQISVAELSYEANMIASRTFRN 186 Query: 189 LIIYCELAFVYLILT 203 Y + +YL L Sbjct: 187 FEAYIVVTIMYLALA 201 >gi|71734056|ref|YP_274851.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554609|gb|AAZ33820.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 220 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 95/162 (58%), Gaps = 3/162 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + ++ YV + R TP+LV + +I++ LP +GI D I++L+L AY++E+ R+ Sbjct: 53 LRIVASIYVTVVRNTPILVLILLIYFALPGLGIRLDKLAPFIVTLSLYAGAYLTEVFRAG 112 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++SI KGQ +A AIGL Q +II+P + LS+ FIS+ K TS+A+ I +PE Sbjct: 113 LLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPE 172 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + A++I +Y+ + + +Y++ CY+I + + + Sbjct: 173 LTYYARKINVESYRVIETWLVTTALYVVA---CYVIAMLLRT 211 >gi|227529453|ref|ZP_03959502.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Lactobacillus vaginalis ATCC 49540] gi|227350538|gb|EEJ40829.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Lactobacillus vaginalis ATCC 49540] Length = 204 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 66/183 (36%), Positives = 111/183 (60%), Gaps = 5/183 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +V T+ +A IS V+ L++G +AV+++ ++ ++SLI Y+ R TPLLVQ+++++ Sbjct: 3 GLVTTIELAVISIVLGLLLGIALAVMKMSKAN-LLSLIAKTYIGFIRNTPLLVQIYIVYI 61 Query: 80 GLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 GLP + G + FV I++LTL AYI+EIIRS I S+P GQ +A+ ++G+ + + + Sbjct: 62 GLPQLLGFSVNDFVTGIVALTLYSGAYIAEIIRSGIQSLPVGQTEAAESLGIPSYRILLN 121 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPLIIYCEL 195 IILPQ L ++ I +K +S+ S + I +I AQ + +T +P+II L Sbjct: 122 IILPQAFKNILPALGNQLIGNVKDSSLVSVLGITDIMFAAQTVRGSTALGLEPMIIASAL 181 Query: 196 AFV 198 V Sbjct: 182 YLV 184 >gi|157369721|ref|YP_001477710.1| glutamine ABC transporter permease [Serratia proteamaculans 568] gi|157321485|gb|ABV40582.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 219 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 50/157 (31%), Positives = 95/157 (60%), Gaps = 2/157 (1%) Query: 64 IFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI G Sbjct: 61 VIRGTPIVVQVMFIYFALPMAFSDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHSGF 120 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A A+GL+R++TIR++I+P + PL +++I +K TS+ I + E+ + Q I Sbjct: 121 REAGLALGLSRRETIRYVIMPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEI 180 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 ++ ++ L I+ +A +YLI+T + ++E + Sbjct: 181 IAGNFRALEIWSAVAVIYLIITLVLSFVLRRLERRMK 217 >gi|261340700|ref|ZP_05968558.1| histidine transport system permease protein HisM [Enterobacter cancerogenus ATCC 35316] gi|288317116|gb|EFC56054.1| histidine transport system permease protein HisM [Enterobacter cancerogenus ATCC 35316] Length = 238 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 115/213 (53%), Gaps = 11/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S V+ I+ F+A+ R+ ++ I + + ++FRGTPL VQL V Sbjct: 20 FTGVAITLWLLISSVVMGGILAIFLAIGRVS-NNKYIRFPIWLFTYVFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTEMLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPYGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSSVKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P + A +YLI++ + K E QH Sbjct: 199 PFTAFGIAAVLYLIISYVLISLFRKAEKRWLQH 231 >gi|121610493|ref|YP_998300.1| Fis family transcriptional regulator [Verminephrobacter eiseniae EF01-2] gi|121555133|gb|ABM59282.1| transcriptional regulator, Fis family [Verminephrobacter eiseniae EF01-2] Length = 221 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 104/181 (57%), Gaps = 2/181 (1%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ ++ IS V S++ G I ++R++ + L++ FY+ R P+LV L I++ P Sbjct: 21 VTVVLSVISAVSSILAGLVITLLRLYGPRWLRPLLV-FYIDSMRAIPVLVVLVWIYFAFP 79 Query: 83 -HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 +G+ F F A +++LTL+ +AY +E+IR+ I SI GQ A+ A+G++R Q +R ++L Sbjct: 80 ILVGLNFAPFWAALVALTLHIAAYAAEVIRAGIESIRPGQTRAALALGMSRAQILRKVLL 139 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ S +K T++AS I +PE+ A+ + +Y+P+ + + Y + Sbjct: 140 PQATIRMLPAFGSILTMAIKDTAIASVIAVPELMHKAETVAGQSYRPVEVSSAVMLAYFL 199 Query: 202 L 202 + Sbjct: 200 I 200 >gi|283954479|ref|ZP_06371999.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 414] gi|283794096|gb|EFC32845.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 414] Length = 250 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 62/193 (32%), Positives = 108/193 (55%), Gaps = 14/193 (7%) Query: 20 AIVVTLPIACISFVISLI---IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 V TL ++ ++ +I+ I IG +A R +I YV +F+ PL++Q+F Sbjct: 47 GFVYTLEVSVLALLIATIFGTIGGVMATSRF----KVIRAYTRIYVELFQNVPLVIQIFF 102 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +FY LP +GI D F ++ + AY+SE++RS I+++PKGQ++AS + G T Q + Sbjct: 103 LFYALPVLGIRLDIFTIGVLGVGAYHGAYVSEVVRSGILAVPKGQFEASASQGFTYIQQM 162 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST--TYQPLIIYCE 194 +II+PQTI P++++ ++++K+TSV + E+ +A + Y P I+ Sbjct: 163 YYIIVPQTIRIILPPMTNQMVNLIKNTSVLLIVGGAELMHSADSYAADYGNYAPAYIFA- 221 Query: 195 LAFVYLILTSFCY 207 A +Y I+ CY Sbjct: 222 -AVLYFII---CY 230 >gi|163858764|ref|YP_001633062.1| amino acids ABC transporter, permease protein [Bordetella petrii DSM 12804] gi|163262492|emb|CAP44795.1| amino acids ABC transporter, permease protein [Bordetella petrii] Length = 230 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 116/221 (52%), Gaps = 7/221 (3%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L++ +P +V T+ +A +S ++ IG +A+ RI S I V+ Sbjct: 8 NWLLLLVGQWPNGPMGGLVATVGLALVSLALAFPIGVLLALGRIS-SHKIFYWPATAVVY 66 Query: 64 IFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RG PL++ +F ++ LP IG V + +L + AY+SEIIRS I ++P GQ Sbjct: 67 VVRGLPLIMFIFWAYFFLPLLIGNTVSGVVTMAAALIIYEGAYLSEIIRSGIQALPAGQM 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRI 181 +A ++GL+ Q +R I+LPQ + + + S+FIS +K TS+ I++ E+ F AQ Sbjct: 127 EAGRSLGLSHMQAMRKIVLPQALYNTIPSMLSQFISTVKETSLGFVISVHELTFAAAQVN 186 Query: 182 VSTTYQPLIIYCELAFVY----LILTSFCYIIQIKIESSVT 218 +P ++ LA Y LILT +++ ++ + T Sbjct: 187 NMLLTKPFEVFSLLALTYFVLNLILTGIVKLVEARMGGTRT 227 >gi|260776170|ref|ZP_05885065.1| histidine ABC transporter permease protein HisM [Vibrio coralliilyticus ATCC BAA-450] gi|260607393|gb|EEX33658.1| histidine ABC transporter permease protein HisM [Vibrio coralliilyticus ATCC BAA-450] Length = 225 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 110/203 (54%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LII+S P L + T + ++ +I L + + V R ++ +I+ +++ F Sbjct: 3 FSLIIESLPIYL-DGLWTTAWLVGLALIIGLCVAIPLGVARNS-TNYLINGPSWAFIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR SI +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGSINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G+ T R IILP + + S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMGTFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIVDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFESFLTAGLFYMALT 203 >gi|167841846|ref|ZP_02468530.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia thailandensis MSMB43] Length = 225 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 106/198 (53%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F I++ +P LL A ++L IA ++FV ++IG A I + + + ++ YV Sbjct: 8 FAPILEQWPYLL-AGAWLSLQIAMLAFVFGMLIGVVCASI-VHYGPASLRRVVAAYVMFA 65 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 TP LVQ+F +F+ LP +G+ F A++I T N AY+ EI R+ S+ + + +A+ Sbjct: 66 TNTPQLVQIFFLFFALPEVGVTLSPFSAVLIGATFNAGAYLCEIQRAGFASVRRAEIEAA 125 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +G + Q +R++I P + PLS++FI + TS+AS + E+ + S T Sbjct: 126 EVLGFSTSQIVRYVIFPHVLKVMFPPLSNQFIMMTLGTSMASVFGVEELTGRTFNLSSQT 185 Query: 186 YQPLIIYCELAFVYLILT 203 Y + + A +Y+ +T Sbjct: 186 YLSIEAFSVAAVMYIAIT 203 >gi|331003782|ref|ZP_08327276.1| hypothetical protein HMPREF0491_02138 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412165|gb|EGG91560.1| hypothetical protein HMPREF0491_02138 [Lachnospiraceae oral taxon 107 str. F0167] Length = 216 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 55/152 (36%), Positives = 92/152 (60%), Gaps = 4/152 (2%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDS---FVAIIISLTLNFSAYISE 108 ++S I Y+ I RGTPL++QL V+++G +I G+ +A +I +N++AY +E Sbjct: 45 VVSYICKIYISIMRGTPLMLQLMVVYFGPYYIFGVSISGSYRVIATVIGFVINYAAYFAE 104 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I RS I S+P GQ++A+ +G ++ QT IILPQ I +++E I+++K TS+A T Sbjct: 105 IYRSGIQSMPSGQYEAAKILGYSKSQTFFIIILPQVIKRILPSITNEVITLVKDTSLAFT 164 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 I++ E+F A+ + S+T C F Y+ Sbjct: 165 ISVAEMFTMAKALASSTTSMYPFVCAALFYYM 196 >gi|170767520|ref|ZP_02901973.1| histidine ABC transporter, permease protein HisM [Escherichia albertii TW07627] gi|170123854|gb|EDS92785.1| histidine ABC transporter, permease protein HisM [Escherichia albertii TW07627] Length = 238 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 115/213 (53%), Gaps = 11/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + +S VI ++ F+A+ R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLILSVVIGGVLALFLAIGRVS-SNKYIQFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTEFLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + IILP + + S+E I +L ST++A T T+P++ + A+ I + TYQ Sbjct: 139 YGFSTFKMYHCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P + A +YLI++ + + E QH Sbjct: 199 PFTAFGIAAVLYLIISYVLISLFRRAEKRWLQH 231 >gi|312866273|ref|ZP_07726492.1| ABC transporter, permease protein [Streptococcus downei F0415] gi|311098246|gb|EFQ56471.1| ABC transporter, permease protein [Streptococcus downei F0415] Length = 263 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 132/233 (56%), Gaps = 17/233 (7%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ ++D FPQ+L A +T I +S + ++ +AV+R+ I++ + Y Sbjct: 5 FHYLLDLFPQIL-KAFPITFFIVLVSTLAGSLLALLLAVVRLE-KVPILNQLTLVYTSFI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLT-------LNFSAYISEIIRSSIISIP 118 +GTP++VQLF+++YG+P++ + +A + LT LN AY EIIRS+I ++P Sbjct: 63 QGTPVIVQLFIVYYGVPYLLGLLGIDIAGVSKLTFMYIAYSLNAGAYFGEIIRSAIANVP 122 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 + Q+DA+Y+IG+ + QT R+ ILPQ + + +S+L+++S+A+ + I +I A Sbjct: 123 RHQFDAAYSIGMDKVQTYRYYILPQAVKEMIPNIELSIVSLLQNSSLATYLGIYDIMGKA 182 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYII--------QIKIESSVTQHTYS 223 Q + + T + + + + ++++L+ ++ + K E S+ ++T S Sbjct: 183 QLVGTNTAHQIEAFIDASIIFIVLSVVIHLAFKLFFGADEAKNEESLVENTAS 235 >gi|239503579|ref|ZP_04662889.1| ABC-type amino acid transport system, permease component [Acinetobacter baumannii AB900] Length = 219 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 109/187 (58%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +++ + ++ F ++A + TL I+ IS ++++I+G I I I + +++ I F Sbjct: 1 MNWQYIHSVLPQF----FSATLTTLKISIISIILAIIVGL-ICSILITYRVRVLNRIAQF 55 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLL+QLF ++YGLP +GI D F +I LT +Y++E R+ + S+ KG Sbjct: 56 YIELSRNTPLLIQLFFLYYGLPKLGIKIDGFTCGVIGLTFLGGSYMAEAFRAGLQSVAKG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q D++ +IGL Q R+++ PQ + S + + + ++K +SV S I + E+ + Sbjct: 116 QIDSAKSIGLQPIQIFRYVVFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKD 175 Query: 181 IVSTTYQ 187 ++ Y+ Sbjct: 176 LIGMDYK 182 >gi|295106092|emb|CBL03635.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Gordonibacter pamelaeae 7-10-1-b] Length = 217 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 114/210 (54%), Gaps = 6/210 (2%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 +LL + + T+ I ++ V SL +G +A R+ I +L+ FY+ + RGTPL++QL Sbjct: 8 ELLLSGLAFTVQIFLVTLVGSLPLGVLVAFGRMSRFKPI-ALVTRFYISVMRGTPLMLQL 66 Query: 75 FVIFYG---LPHIGIVFD-SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + +G L + + D + A I +N++AY EI R I SIP+GQ++A+ +G Sbjct: 67 MALMFGPYYLLGLNMGGDWKYWACSIGFIINYAAYFGEIYRGGIQSIPRGQYEAAEVLGY 126 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 ++ QT I+LPQ + +S+E I+++K TS+A + I E+F A+ I ++ ++ Sbjct: 127 SKLQTFMKIVLPQVVKRILPAMSNEIITLVKDTSLAFVLGIMEMFSQAKAIAASQVS-ML 185 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y +Y + I+ +IE + + Sbjct: 186 PYVIAGVIYWVFNFIVEIVLTRIEKKLNYY 215 >gi|289168269|ref|YP_003446538.1| ABC transporter membrane-spanning permease-amino acid transport [Streptococcus mitis B6] gi|288907836|emb|CBJ22676.1| ABC transporter membrane-spanning permease-amino acid transport [Streptococcus mitis B6] Length = 226 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 106/194 (54%), Gaps = 1/194 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A ++TL IA + S ++G +++IR + +++ + Y+ + R T Sbjct: 5 IVEQYLPLYQKAFLLTLHIAVWGILGSFLLGLIVSIIR-HYRIPVLAQVATAYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IGIV S V + L +Y++E RS + ++ + Q + AI Sbjct: 64 PLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAVSQTQQEIGLAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q R+++LPQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 124 GLTPVQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183 Query: 189 LIIYCELAFVYLIL 202 I L YLI+ Sbjct: 184 DIALAMLVVAYLIM 197 >gi|238020503|ref|ZP_04600929.1| hypothetical protein GCWU000324_00385 [Kingella oralis ATCC 51147] gi|237867483|gb|EEP68489.1| hypothetical protein GCWU000324_00385 [Kingella oralis ATCC 51147] Length = 279 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 72/229 (31%), Positives = 120/229 (52%), Gaps = 40/229 (17%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF-FSDTIISLIMHFYVWI--- 64 +I + + V T+ I I+ + I+G A++RI F + ++ M + W+ Sbjct: 37 VIYEYRHMFLTGAVATVVITVIATLFGTILGTIGALMRIMRFENG--NVFMRAFAWLCRT 94 Query: 65 --------FRGTPLLVQLFVIFYGL------PHIGIV------------FDSFVAIIISL 98 FRGTP+ VQ+F+ ++ P G++ + +++A ++L Sbjct: 95 ISWLYITFFRGTPMYVQIFIWYFVWFVALVHPQHGLIVSGSEAVALRREYGAWIAGCLAL 154 Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158 T N AYI+EI R+ I SI KGQ +A+ ++GLT Q +R IILPQ + PL++EFI+ Sbjct: 155 TANTGAYITEIFRAGIQSIDKGQMEAARSLGLTYPQAMRFIILPQALRRMLPPLANEFIT 214 Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE----LAFVYLILT 203 +LK +S+ + I +PE+ Q+ +S Y IY E +A VYL +T Sbjct: 215 LLKDSSLLAMIAVPEL-AYVQKTISGRYS---IYEEPLYTVALVYLAMT 259 >gi|154687483|ref|YP_001422644.1| YtmL [Bacillus amyloliquefaciens FZB42] gi|154353334|gb|ABS75413.1| YtmL [Bacillus amyloliquefaciens FZB42] Length = 240 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 52/154 (33%), Positives = 90/154 (58%), Gaps = 7/154 (4%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI----GI---VFDSFVAIIISLTLNFSAY 105 +++ Y+ FRGTP++VQLF++FYG+P + GI D A I + L+ +A Sbjct: 52 VLNQFAKLYISFFRGTPIMVQLFIVFYGIPALTALAGIDTSKMDPLYAAIATYALSSAAR 111 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 +EIIR + S+ +GQ +A+++IGL QT R IILPQ + + + + I LK TS+ Sbjct: 112 AAEIIRGGVNSVDRGQAEAAFSIGLNGGQTFRRIILPQALVQAFPNIGNMVIGFLKDTSL 171 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 A +I + ++ Q +++++ L +Y L+ +Y Sbjct: 172 AFSIGVMDMSGRGQTLITSSNHSLEVYISLSVLY 205 >gi|153011817|ref|YP_001373030.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151563705|gb|ABS17201.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 226 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 111/197 (56%), Gaps = 2/197 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ ++P LL +V+T+ I ++ + + +G A + + + +I+ YV R T Sbjct: 9 VLSAWPSLL-NGLVMTIVITAVASFLGVCLGTLCAWGSLK-ARKFLRIIIRCYVEFTRNT 66 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P L Q+F IF+GLP +G+ +S A I+++T N +AY EIIR+ I + P+GQ++AS A+ Sbjct: 67 PFLGQIFFIFFGLPTLGLKMNSLTAAIVAMTFNLTAYACEIIRAGIEATPRGQFEASDAL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL QT +++P ++S+ + IL ++++ S I++ E+ A I S T++ Sbjct: 127 GLKPVQTFFLVVIPPAFQRVWPAMTSQLVIILLASALCSQISVAELSYVANVIASRTFRN 186 Query: 189 LIIYCELAFVYLILTSF 205 Y + +YL L F Sbjct: 187 FEAYIVVTILYLFLAIF 203 >gi|302189024|ref|ZP_07265697.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. syringae 642] Length = 232 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 115/207 (55%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N+I DS P L + ++ TL + IS L+ + ++R+ + +++ Y ++ Sbjct: 5 YNVIWDSLP-LYFGGLLTTLKLLAISLAFGLLAALPLGLMRVS-KNPWVNMPAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +SF+ ++ T+N SAY +EII S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFDAVRESFLWPWLSSATFCACLAFTINTSAYTAEIIAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G+++ + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + Y P Y YL LT Sbjct: 183 AARTVNAQFYLPFEAYITAGVFYLCLT 209 >gi|238798539|ref|ZP_04642017.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia mollaretii ATCC 43969] gi|238717626|gb|EEQ09464.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia mollaretii ATCC 43969] Length = 198 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 64/181 (35%), Positives = 100/181 (55%), Gaps = 4/181 (2%) Query: 23 VTLPIACISFVISLIIGFFI-AVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 VTL I+ + +I + GF + A+ R + YVWI RGTP L QL V ++GL Sbjct: 3 VTLGISLSAAIIGALAGFMLHALCR---HHPWLYWPWRTYVWIIRGTPYLAQLAVFYFGL 59 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 P IG+ + A +ISL + +AY EI R++ S+ +GQ +A+ ++ + HI Sbjct: 60 PAIGVTLTAVEATVISLAIYSAAYFGEIFRTAWKSLGQGQLEAAQVHDISAWNSFWHIQT 119 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ + S L ++FI +K ++VAS IT+PE+ T +IV+ TY ++ Y L Y + Sbjct: 120 PQALRFSLPLLGNQFILTIKESAVASIITVPELTMTTGQIVANTYTYIVPYTLLILSYWL 179 Query: 202 L 202 L Sbjct: 180 L 180 >gi|220913268|ref|YP_002488577.1| polar amino acid ABC transporter inner membrane protein [Arthrobacter chlorophenolicus A6] gi|219860146|gb|ACL40488.1| polar amino acid ABC transporter, inner membrane subunit [Arthrobacter chlorophenolicus A6] Length = 216 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 67/217 (30%), Positives = 123/217 (56%), Gaps = 10/217 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVW 63 ++I+++ P L + + TL ++ +S VI+L++G +A R+ + ++ + F YV Sbjct: 2 DVILENLP-LYWEGFLRTLFLSAVSGVIALVLGTLLAAARV----SPVAALRGFSTVYVE 56 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSF-VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + R TPL + F LP +G+ F+ F +A II+L+ +A+I+E +RS + S+P GQ Sbjct: 57 VLRNTPLTIAFFFAAIVLPRLGVKFEQFEIAAIIALSTYTAAFIAEAVRSGVNSVPVGQA 116 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ +IG+ Q + IILPQ + T PL + I+++K++SVA + E+F +++ Sbjct: 117 EAARSIGMGFGQVLSLIILPQALRTVIPPLINILIALVKNSSVAGAFFVLELFGYGRQLA 176 Query: 183 STTYQPLI-IYCELAFVYLILTSFCYIIQIKIESSVT 218 + +I + AF YL+LT I+ +E V Sbjct: 177 NANGDAVITVLLGTAFFYLLLTVPLGILASTVERKVA 213 >gi|152996346|ref|YP_001341181.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Marinomonas sp. MWYL1] gi|150837270|gb|ABR71246.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuD [Marinomonas sp. MWYL1] Length = 225 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 116/216 (53%), Gaps = 4/216 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 + P +L AA VTL + ++++++G A++R S T+ + ++ V R TPL Sbjct: 13 EVLPMILSAA-KVTLLATLLGSILAIVMGLVFALLRRSKSRTL-CISTYWIVEFVRSTPL 70 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LVQ+F ++Y +P G+ + +L L++ AY+SE+ RS I I KGQW+A+ A+ L Sbjct: 71 LVQIFFLYYVMPEFGVSMSPLATGVFALGLHYGAYLSEVFRSGIDGIEKGQWEAARALNL 130 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEF-ISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 T T + I+LPQ I +P + + I++ K T S IT+ E+ Q A+ I S ++ L Sbjct: 131 TIIDTYKDIVLPQAI-RPMIPATGNYIIAMFKETPQLSAITLLEMLQMAKIIGSENFRYL 189 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + + +YL+ + ++E + +S+ Sbjct: 190 EPFTLVGILYLVFSLLAAYGIHQVERRFPKEGFSLK 225 >gi|146312498|ref|YP_001177572.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter sp. 638] gi|145319374|gb|ABP61521.1| L-histidine ABC transporter membrane protein / L-lysine ABC transporter membrane protein / L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein [Enterobacter sp. 638] Length = 237 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 114/213 (53%), Gaps = 11/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S V+ I+ F+A+ R+ ++ I + + ++FRGTPL VQL V Sbjct: 20 FTGVAITLWLLISSVVVGGILAVFLAIGRVS-NNKYIRFPIWLFTYVFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A A Sbjct: 79 YSGMYTLEIVKGTEILNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPYGEIEAGRA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSSVKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P + A +YLI++ + K E QH Sbjct: 199 PFTAFGIAAVLYLIISYVLISLFRKAEKRWLQH 231 >gi|301799826|emb|CBW32397.1| putative glutamine transporter [Streptococcus pneumoniae OXC141] Length = 378 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 56/166 (33%), Positives = 95/166 (57%), Gaps = 13/166 (7%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P Y A+V L C+ F + I+G +A + ++ L + YVWIFRGTP++V Sbjct: 12 LPYFNYGAVVTILISICVIF-LGTILGVVLAFGQCSKFKPLVWLA-NLYVWIFRGTPMMV 69 Query: 73 QLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 Q+ + F L HI G+ F + I+ +++N AY+SE +R+ I ++PKGQ Sbjct: 70 QIMIAF-ALMHINAPTIQIGILGVDFSRLIPGILIISMNSGAYVSETVRAGINAVPKGQL 128 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 +A+Y++G+ K +R++ILPQ + L +EFI+I+K +S+ + Sbjct: 129 EAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLGPS 174 >gi|228957062|ref|ZP_04118836.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802622|gb|EEM49465.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pakistani str. T13001] Length = 218 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ I +V R PL++ F+ ++ LP IGI Sbjct: 25 SVIALIGSFILGVILAVMRIA-PIRILNWIGSAFVEFVRNIPLVLIAFIFYFALPVIGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + F+A ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + +++LPQ + Sbjct: 84 LNGFIAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYVQAMYYVVLPQAVKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|121604397|ref|YP_981726.1| polar amino acid ABC transporter inner membrane subunit [Polaromonas naphthalenivorans CJ2] gi|120593366|gb|ABM36805.1| amino acid ABC transporter membrane protein 2, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 217 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 113/193 (58%), Gaps = 3/193 (1%) Query: 12 SFPQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 P+ L+ A T+ ++ I+F+ I G +A+ R + + L+ ++ IF+GTP Sbjct: 5 GLPEFLFILEAAKWTVALSLIAFIGGAIGGLLVALGRTS-ENRLAQLLSGGFIQIFQGTP 63 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+QLF++F+G P +G + ++A ++L LN SA++ EI R I +IP GQ +A++A+ Sbjct: 64 LLLQLFLVFFGAPVLGFDINPWIAAGVALILNSSAFLGEIWRGCIQAIPAGQVEAAHALS 123 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+ +R +ILPQ + P + I+K TS+A+ I EI + Q I + T+QPL Sbjct: 124 LSYFSRMRFVILPQAFKIALAPTVGYLVQIIKGTSLAAIIGFTEITRAGQIINNATFQPL 183 Query: 190 IIYCELAFVYLIL 202 I++ +A +Y L Sbjct: 184 IVFSVVAAIYFAL 196 >gi|328956550|ref|YP_004373936.1| glutamine ABC transporter permease protein GlnM [Carnobacterium sp. 17-4] gi|328672874|gb|AEB28920.1| glutamine ABC transporter permease protein GlnM [Carnobacterium sp. 17-4] Length = 236 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 62/181 (34%), Positives = 104/181 (57%), Gaps = 5/181 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL +A ++ V+SL+IG I ++ + I+ I YV IF+ PL++Q+F ++ GL Sbjct: 29 TLQVAILALVLSLVIGIIIGILSTA-HNLILRSIARVYVEIFQNIPLVIQIFFMYNGLAM 87 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 G+V F ++ + L AYI E++R+ I+S+ KGQ +A+YA G + QT+R+IILPQ Sbjct: 88 AGLVLSEFTIGVVGVGLYHGAYIGEVVRAGILSVTKGQQEAAYAQGFSYTQTMRYIILPQ 147 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV--STTYQPLIIYCELAFVYLI 201 + PL+++ ++++K+TSV + I ++ A S Y P Y +Y I Sbjct: 148 MVKGILPPLTNQAVNLIKNTSVLAIIAGADLMYAADSYASFSLNYGP--SYVVAGLLYFI 205 Query: 202 L 202 L Sbjct: 206 L 206 >gi|310644455|ref|YP_003949214.1| amino acid abc transporter, permease protein [Paenibacillus polymyxa SC2] gi|309249406|gb|ADO58973.1| Amino acid ABC transporter, permease protein [Paenibacillus polymyxa SC2] Length = 221 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 104/188 (55%), Gaps = 5/188 (2%) Query: 1 MKYEWFNLIIDSFPQLLYA-AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M +W I++S P LY A+ +TL IA + + SL++G +++ +++ IS I+ Sbjct: 1 MNLDW-EFIVESLP--LYGEAMWLTLKIAFFAILFSLVVGLLCSIV-LYYRVKGISGIIV 56 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQL+ ++YG IG+ I+ +T Y++E R I ++ K Sbjct: 57 AYIELSRNTPLLVQLYFLYYGFTKIGLHMSEMTCAIVGMTFLGGGYMAEAFRGGIEAVSK 116 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q ++ ++GL++ Q R++ILPQ + S L + I +LK TS+ I + ++ A+ Sbjct: 117 TQTESGLSLGLSKIQLARYVILPQAFSISIPSLGANAIFLLKETSIVGAIALLDLMNVAK 176 Query: 180 RIVSTTYQ 187 ++ Y+ Sbjct: 177 DLIGMYYK 184 >gi|310814815|ref|YP_003962779.1| polar amino acid ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] gi|308753550|gb|ADO41479.1| polar amino acid ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] Length = 226 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 65/206 (31%), Positives = 112/206 (54%), Gaps = 7/206 (3%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--I 57 M Y++ F ++ +P + A V TL + + + ++IG A+ R ++L + Sbjct: 1 MSYQFNFAALVPYWPDFISGAWV-TLQLTVGAVIFGMVIGVLCAIAR---RSRFVALRSV 56 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 YV R TP +VQ+F +F+G+ +G+ VA I +L +N AY +EIIR+ + +I Sbjct: 57 AGVYVETVRNTPFIVQIFFLFFGMSSVGVRMPIMVAAIFALVVNVGAYTAEIIRAGMDAI 116 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKGQ +A+ A+GL++ Q R IIL I L+S+F+ ++ +TS+ S I+ E+ Sbjct: 117 PKGQIEAAEALGLSQFQIYRDIILMPAIEKVYPALTSQFVLMMLTTSICSQISAEELTGV 176 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 A I S T++ Y + Y+ +T Sbjct: 177 ANNIQSNTFRSFETYIVIGLFYIGIT 202 >gi|323339297|ref|ZP_08079587.1| glutamate ABC superfamily ATP binding cassette transporter permease protein [Lactobacillus ruminis ATCC 25644] gi|323093281|gb|EFZ35863.1| glutamate ABC superfamily ATP binding cassette transporter permease protein [Lactobacillus ruminis ATCC 25644] Length = 228 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 60/166 (36%), Positives = 90/166 (54%), Gaps = 15/166 (9%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI---------GIVFDSFVAIIISLTL 100 + I+ I Y+ I RGTP ++Q+ +I+Y L + G D + I+L L Sbjct: 44 DNKILETISRVYISIVRGTPSMIQVMLIYYSLSKVLSIPPIHILGASLDRVLPGSIALGL 103 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N AY +EI RS IISIPKGQ +A ++G+TR + I+LPQ + + + +EFIS++ Sbjct: 104 NSGAYTAEIFRSGIISIPKGQTEAGLSLGMTRHMVMFEIVLPQAVRNALPAMGNEFISLI 163 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCELAFVYLILT 203 K +SV I + E+ A + T Y PLI+ A VY +LT Sbjct: 164 KESSVLFYIGVQEVTAQALGVGGTLYDFVPPLIV---AAAVYFVLT 206 >gi|83950534|ref|ZP_00959267.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius nubinhibens ISM] gi|83838433|gb|EAP77729.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius nubinhibens ISM] Length = 238 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 12/225 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 + W L + + L + + T +A ++V++L++G I V R + I+ + Y Sbjct: 4 NWNWGVLFEEQYLSWLISGVGWTFSVALSAWVLALLVGVLIGVGRTL-PNRPIAFLCTTY 62 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-----------GIVFDSFVAIIISLTLNFSAYISEII 110 V IFR PLLVQLF+ ++ +P I + FV +I L L ++ ++E + Sbjct: 63 VEIFRNVPLLVQLFLWYFVVPEIVPQDMGRWMKRDMPNPEFVTAVIGLGLYTASRVAEQV 122 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R+ I ++ KG ASYA G + QT R+++LP + P++SEF++I K++S+A TI Sbjct: 123 RAGINAVGKGLVAASYANGFSTAQTYRYVLLPISFRLIVPPMTSEFLTIFKNSSLALTIG 182 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + E+ +Q+I T+Q Y +Y+++ +I +E Sbjct: 183 LLELTAQSQQIAEYTFQGFEAYTAATIIYVVIALMATVIAQMLEK 227 >gi|150377557|ref|YP_001314152.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] gi|150032104|gb|ABR64219.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 307 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 63/195 (32%), Positives = 109/195 (55%), Gaps = 24/195 (12%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + +TL + ++ V+ L IG +A++R+ S + ++ ++W FRG P LVQ+ + + Sbjct: 64 SGLGMTLLLTFLAMVLGLAIGVVLAIMRLSASR-VFQVVSWGWIWFFRGVPPLVQM-IFW 121 Query: 79 YGL----PHI--GIVFDS--------------FVAIIISLTLNFSAYISEIIRSSIISIP 118 Y L P I GI F F A I+ L SAY +E+IR+ I ++ Sbjct: 122 YNLALLLPEISIGIPFGGPKLLSWNTNQLITPFSAAIMGLAFTESAYAAEMIRAGIQAVN 181 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +A+ +G+ R QT+R I+LPQ + P+ ++ IS+LK TS+ S + +P++ +A Sbjct: 182 AGQTEAAATLGMKRGQTLRRIVLPQALRIVIPPIGNDTISMLKFTSLVSVLALPDLLYSA 241 Query: 179 QRIVSTTYQ--PLII 191 Q + + TYQ PL++ Sbjct: 242 QMVYARTYQTVPLLL 256 >gi|119387801|ref|YP_918835.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119378376|gb|ABL73139.1| amino acid ABC transporter membrane protein 1, PAAT family [Paracoccus denitrificans PD1222] Length = 222 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 109/200 (54%), Gaps = 6/200 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVW 63 F + + LLY A + T+ ++ ++ V+ LI+ AV + + I L + YV Sbjct: 6 FQPVFGNLDLLLYGAWL-TVRLSLMAMVLGLIVSVLGAVAK---TSGIRPLRWLTDVYVE 61 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + R TP LVQ+F IF+GLP GI A +++L +N AY +EIIR+ I SIP+GQ + Sbjct: 62 VIRNTPFLVQIFFIFFGLPAAGISMSPNTAALVALVVNVGAYGTEIIRTGIESIPRGQIE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GL+ Q RH+++ + L+S+FI ++ ++SV S I+ ++ + + Sbjct: 122 AGRALGLSPVQIFRHVVMIPALRNIYPSLTSQFIYLMLTSSVVSIISANDLASAGADLNA 181 Query: 184 TTYQPLIIYCELAFVYLILT 203 T+ IY L +Y +L Sbjct: 182 RTFASFEIYLVLTILYFLLA 201 >gi|297627339|ref|YP_003689102.1| polar amino acid ABC transporter, inner membrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296923104|emb|CBL57691.1| polar amino acid ABC transporter, inner membrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 212 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 113/201 (56%), Gaps = 3/201 (1%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGTPLLVQL 74 + AI+ +P + + + +GF +A+ +F ++ I F V + RG P +V L Sbjct: 4 FTAIIAAVPYTALVTLGAFGLGFVLAIPLMFARRARLMVVRGISGFIVDLARGIPPIVWL 63 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +I++GLP++GI+ D A II L + + Y++EI R ++++ KGQ++A+ A+GL Sbjct: 64 LMIYFGLPNLGIMLDPIPAAIIGLGIITAGYLAEIFRGGMLAVRKGQFEAANALGLGGWT 123 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + ++ PQ + L++ I ++K +S+AS I + E+ TA + + ++++ E Sbjct: 124 SFTRVVAPQAMRAMQPGLTTYSIGLIKDSSIASVIGVTEMVYTANSYAKISKEGVLLFFE 183 Query: 195 LAFVYLILTSFCYIIQIKIES 215 A +YL+++ ++ +IE+ Sbjct: 184 AALIYLVISVPLGLLARRIEA 204 >gi|221195858|ref|ZP_03568911.1| permease protein of ABC transporter system [Atopobium rimae ATCC 49626] gi|221184332|gb|EEE16726.1| permease protein of ABC transporter system [Atopobium rimae ATCC 49626] Length = 217 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 57/172 (33%), Positives = 103/172 (59%), Gaps = 2/172 (1%) Query: 17 LYA-AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 LYA A +T+ I+ V SLI+G V+ + ++ + YV + R TPLLVQLF Sbjct: 12 LYATAARITIGISFFGIVASLIVGLICTVV-VQAKTPVLRQCVSVYVELSRNTPLLVQLF 70 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +I++GL IGI D+ VA ++ LT +Y++E +RS S+ + Q ++++ +GL++KQ+ Sbjct: 71 LIYFGLTKIGIKMDAEVAAVVGLTFLGGSYMAEALRSGFDSVERIQEESAWVLGLSQKQS 130 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 + +++LPQ ++ S L + I ++K +SV S I + ++ A+ ++ Y Sbjct: 131 LWYVVLPQALSVSLPSLVANTIFLIKESSVVSAIALADLMFVAKDLIGMMYN 182 >gi|49476851|ref|YP_034899.1| glutamine ABC transporter permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|196035738|ref|ZP_03103141.1| amino acid ABC transporter, permease protein [Bacillus cereus W] gi|228932068|ref|ZP_04094960.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228944393|ref|ZP_04106766.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|49328407|gb|AAT59053.1| ABC transporter, permease; probable glutamine ABC transporter, permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|195991705|gb|EDX55670.1| amino acid ABC transporter, permease protein [Bacillus cereus W] gi|228815295|gb|EEM61543.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228827651|gb|EEM73393.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 218 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 104/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +A++RI I++ + V R PL++ F+ ++ LP +GI Sbjct: 25 SVIALIGSFILGVVLAIMRIA-PIRILNWLGTALVEFVRNIPLVLIAFIFYFALPVVGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + H++LPQ + Sbjct: 84 LNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQAMYHVVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|325278186|ref|ZP_08143685.1| amino acid ABC transporter, permease protein [Pseudomonas sp. TJI-51] gi|324096680|gb|EGB95027.1| amino acid ABC transporter, permease protein [Pseudomonas sp. TJI-51] Length = 239 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 68/228 (29%), Positives = 119/228 (52%), Gaps = 15/228 (6%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +L + Q L A +VT+ +A I L +G +A+ + F +F Sbjct: 8 LSLASGGWGQALLAGALVTVSLALACLPIGLPLGLVVALAARSRKRLPRAWATTFST-VF 66 Query: 66 RGTPLLVQLFVIFYG--------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSS 113 RG P L+ L +I+YG L +G + ++FVA +I+ +L F+A+ SEI ++ Sbjct: 67 RGLPELLTLLIIYYGCQIAAQKVLAALGYEGEFLINTFVAAMIAFSLVFAAFSSEIWLAA 126 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP-LSSEFISILKSTSVASTITIP 172 ++PKGQW+A A+GL+++ ++LPQ +T A+P LS+ ++S+LK TS+ STI++ Sbjct: 127 FKTLPKGQWEACSALGLSKRTGFFKVLLPQ-LTRIALPGLSNNWLSLLKDTSLVSTISLV 185 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ + VS T +P+ Y YL+ + + IE +H Sbjct: 186 DLMRQTNLAVSVTKEPMFFYGVACLGYLLFAALSGRVFAYIERRSNRH 233 >gi|307246271|ref|ZP_07528352.1| Arginine ABC transporter permease protein artM [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306852880|gb|EFM85104.1| Arginine ABC transporter permease protein artM [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 227 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 116/211 (54%), Gaps = 13/211 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLF 75 A I +P + +SL+I F +AVI F +I I++ Y+ +F GTPLLVQ F Sbjct: 7 AVIAQGIPTSLSLTAVSLLIAFVLAVILTFLLSMESKLIKAIVNGYLMLFTGTPLLVQFF 66 Query: 76 VIFYGLPHIGIVFDSFVAIIIS---------LTLNFSAYISEIIRSSIISIPKGQWDASY 126 +I++G + DSF +S L LN +AY +++ ++ +IPKGQW+ Sbjct: 67 LIYHGPGQFQWIVDSFAWQFLSDAWFCAALALALNSAAYSTQLFHGAVKAIPKGQWETCA 126 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+GL+R T++ I++ + + S+E I + K TS+ASTIT+ +I A+++ T Y Sbjct: 127 ALGLSRLDTLK-ILISYALRRALPSYSNEIILVFKGTSLASTITLLDIMGYARQLYGTEY 185 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + IY +YL++T I+ ++E+ V Sbjct: 186 DAITIYGIAGAIYLVITGIMTILLRRVEAKV 216 >gi|253575035|ref|ZP_04852374.1| glutamine ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251845491|gb|EES73500.1| glutamine ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 216 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 61/179 (34%), Positives = 104/179 (58%), Gaps = 7/179 (3%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIFYGLPHI 84 + ++ V S ++G IAV RI + + F YV R PLL+ +++ +YG + Sbjct: 24 SLLALVGSFVLGALIAVFRI----APVRPLRWFGTGYVEFIRNIPLLLVVYIFYYGPAAL 79 Query: 85 GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQT 144 G+ D F A I L + S++I+E IR+ I++IP+GQ +A+ + GL+ QT+ HIILPQ Sbjct: 80 GLPLDGFTAGTIGLAVYTSSFIAEAIRAGILAIPQGQTEAARSSGLSYVQTMLHIILPQA 139 Query: 145 ITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I PL ++FI+++K++SV + + ++ A + + TY+ Y +A YL+LT Sbjct: 140 IKLVIPPLGNQFINLIKNSSVLTIVAGLDLMYFADIVNADTYRTFDTYIFVALFYLVLT 198 >gi|104784170|ref|YP_610668.1| amino acid ABC transporter permease [Pseudomonas entomophila L48] gi|95113157|emb|CAK17885.1| putative amino acid ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 219 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 115/202 (56%), Gaps = 6/202 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L++ S PQL A TL I+ + + + + G V+ + ++L++ Y+ +FR Sbjct: 7 DLLLVSLPQL-AAGAAQTLTISALGILFATLGGVLYGVLTTL-GNRALNLLLQVYLELFR 64 Query: 67 GTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 P+LV L+++F+GLP G+ SF ++ L L ++ + E++R ++ S+P+GQ +A Sbjct: 65 AIPVLVWLYLVFFGLPIFFGLSIPSFWCAVLVLGLWGASEVGEVVRGALQSLPRGQREAG 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IGL Q +++LPQ + P + + I+K++S+A I + ++ + Q+I+ T Sbjct: 125 LSIGLGGWQLYGYVLLPQALKRMTPPTINIYTRIIKTSSLAVLIGVVDVIKVGQQIIERT 184 Query: 186 YQPLIIYCELAFVYLILTSFCY 207 Y+ ++IY L F++ L CY Sbjct: 185 YESVLIYGAL-FLFFFLV--CY 203 >gi|269123376|ref|YP_003305953.1| polar amino acid ABC transporter, inner membrane subunit [Streptobacillus moniliformis DSM 12112] gi|268314702|gb|ACZ01076.1| polar amino acid ABC transporter, inner membrane subunit [Streptobacillus moniliformis DSM 12112] Length = 510 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 112/205 (54%), Gaps = 16/205 (7%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--------FFSDTIISLIMHF 60 I++ + LY + T+ ++ I IIG ++++R + S I ++ +F Sbjct: 281 IVNYWKDFLYGTLT-TVNLSLIGTFFGFIIGLILSLLRDERNVNKKSWLSIVIYNIFKYF 339 Query: 61 ---YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 YV RGTP++VQ + +YG I GI + + +I ++ N AYI+EI+R I S Sbjct: 340 VSIYVTFIRGTPMIVQAIIFYYGFSQITGINIPALTSALIIVSYNTGAYITEIVRGGIDS 399 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I KGQ++A+ A+G+ +R +ILPQ I +++EFI +K TSV +I + E+F Sbjct: 400 IEKGQYEAAQALGMNHFNIMRKVILPQAIRNVLPSVANEFIINIKDTSVLFSIGVTELFT 459 Query: 177 TAQRIVSTT---YQPLIIYCELAFV 198 T++ IV + Y+ +I C + FV Sbjct: 460 TSKSIVGSHVRYYEVFVITCAIYFV 484 >gi|229042503|ref|ZP_04190248.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH676] gi|296501401|ref|YP_003663101.1| glutamine transport system permease GlnP [Bacillus thuringiensis BMB171] gi|228726856|gb|EEL78068.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH676] gi|296322453|gb|ADH05381.1| glutamine transport system permease protein glnP [Bacillus thuringiensis BMB171] Length = 218 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 58/176 (32%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ I +V R PL++ F+ ++ LP IGI Sbjct: 25 SVIALIGSFILGVILAVMRIA-PIRILNWIGSAFVEFVRNIPLVLIAFIFYFALPVIGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + +I+LPQ + Sbjct: 84 LNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYVQGMYYIVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGMDLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|119963944|ref|YP_948499.1| glutamate permease [Arthrobacter aurescens TC1] gi|119950803|gb|ABM09714.1| Glutamate permease [Arthrobacter aurescens TC1] Length = 216 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 118/200 (59%), Gaps = 6/200 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + +I S P+ + + TL ++ IS +I+LI+G +A +R+ + M FYV + R Sbjct: 2 DAVIASLPEY-WDGFLRTLYLSVISGIIALIVGTLLAAMRVSPVAALRGFSM-FYVEVAR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSF-VAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 TPL + F LP +G+ F+ F VA II+L+ +A+I+E +RS + S+P GQ +A+ Sbjct: 60 NTPLTIIFFFAAIVLPRLGVKFEQFEVAAIIALSSYTAAFIAEAVRSGVNSVPVGQAEAA 119 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+T Q + I+LPQ + T PL + I+++K++SVA + E+F +++ S Sbjct: 120 RSVGMTFTQVLGFIVLPQAVRTVIPPLINILIALVKNSSVAGAFFVLELFGYGRQL-SND 178 Query: 186 Y--QPLIIYCELAFVYLILT 203 Y Q L I +AF YL++T Sbjct: 179 YGNQVLWILLGVAFFYLLIT 198 >gi|116492898|ref|YP_804633.1| ABC-type amino acid transport system, permease and periplasmic component [Pediococcus pentosaceus ATCC 25745] gi|116103048|gb|ABJ68191.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Pediococcus pentosaceus ATCC 25745] Length = 488 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 104/178 (58%), Gaps = 5/178 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I+ + + I G +A++R+ + ++ + YV RGTPL+VQL +++GL Sbjct: 294 TILISILGVIFGFITGTLLALLRLS-DNKVLRGLSAAYVEFVRGTPLMVQLMFVYFGLGL 352 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + + A II+++LN AY++E+IR I S+ GQ +A+ ++GL ++ +R +I+PQ Sbjct: 353 F-VNLPALTAGIIAVSLNSGAYVAEVIRGGINSVDDGQREAAESLGLNKRDRMRFVIMPQ 411 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCELAFV 198 + L +EFIS++K +S+ S I + ++ + + S TY+ P+++ L FV Sbjct: 412 ALKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLKIVQSDTYRGVAPIVVAMILYFV 469 >gi|308175099|ref|YP_003921804.1| cystine ABC transporter permease [Bacillus amyloliquefaciens DSM 7] gi|307607963|emb|CBI44334.1| cystine ABC transporter (permease) [Bacillus amyloliquefaciens DSM 7] Length = 240 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 53/154 (34%), Positives = 91/154 (59%), Gaps = 7/154 (4%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI----GI---VFDSFVAIIISLTLNFSAY 105 +++ I Y+ FRGTP++VQLF++FYG+P + GI D A I + L+ +A Sbjct: 52 VLNQIAKLYISFFRGTPIMVQLFIVFYGIPALTALAGIDTSKMDPLYAAIATYVLSSAAR 111 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 +EIIR + S+ +GQ +A+++IGL QT R IILPQ + + + + I LK TS+ Sbjct: 112 AAEIIRGGVNSVDRGQAEAAFSIGLNGVQTFRRIILPQALVQAFPNIGNMVIGFLKDTSL 171 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 A +I + ++ Q +++++ L +Y L+ +Y Sbjct: 172 AFSIGVMDMSGRGQTLITSSNHSLEVYISLSVLY 205 >gi|291456587|ref|ZP_06595977.1| amino acid ABC transporter, permease protein [Bifidobacterium breve DSM 20213] gi|291381864|gb|EFE89382.1| amino acid ABC transporter, permease protein [Bifidobacterium breve DSM 20213] Length = 243 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 68/220 (30%), Positives = 125/220 (56%), Gaps = 2/220 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +I S P L A V+TL ++ IS V++ ++G +A++R + +++ I + +F Sbjct: 26 WEVIQASLP-LFGKAFVLTLRLSAISVVLATLLGLVLALLR-EYRVPVLAQISTVFEELF 83 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL+QLF ++YG P IGI + + + ++ +++ SAY+S + IP+ Q +++ Sbjct: 84 RNTPLLIQLFFLYYGFPSIGIKWSAEICAVVGMSILGSAYMSGAFQGGFSGIPQVQNESA 143 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL+ Q IRH+ LPQ +T S +++ I ++K TSV + I +PE+ TA+ ++ Sbjct: 144 RALGLSPLQMIRHVTLPQGLTRSVPAVAANVIFMVKETSVFTVIAVPELTNTARDLIGMY 203 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 Y+ EL Y I+ +I +E V + T+ + Sbjct: 204 YRSDEYLLELVIAYAIILIPLSVILTLLERRVRRGTFGDN 243 >gi|225025180|ref|ZP_03714372.1| hypothetical protein EIKCOROL_02074 [Eikenella corrodens ATCC 23834] gi|224942039|gb|EEG23248.1| hypothetical protein EIKCOROL_02074 [Eikenella corrodens ATCC 23834] Length = 259 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 118/223 (52%), Gaps = 28/223 (12%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGF---FIAVIRIFFSDTIISLIM------- 58 II + Q+ + ++ T+ IA + +I+G I VIRI + + ++ Sbjct: 17 IIYEYRQMFFFGVLATIGIAAAATFFGMILGLCNALIRVIRIEKGNIVTKGLLWLLQQCS 76 Query: 59 HFYVWIFRGTPLLVQLFVIFY-----------GLPHIGIV-------FDSFVAIIISLTL 100 YV +FRGTP+LVQ+F+ GL G + + VA +++L+ Sbjct: 77 RLYVTLFRGTPMLVQIFIWHNVWSPLLVHQQNGLLISGDLAVYLRQNYAPLVAGVLALSF 136 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N AYI+E+ RS I SI +GQ +A+ ++GL+ Q +R+IILPQT+ PL +EFI++L Sbjct: 137 NSGAYITEVFRSGIKSIDRGQMEAARSLGLSYGQAMRYIILPQTLRRMLGPLGNEFITLL 196 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 K +S+ +TI + E+ A+ Y Y +A VYL+LT Sbjct: 197 KDSSLLATIAVAELTYVAKSAAGRYYVYEEPYYFIALVYLMLT 239 >gi|209549651|ref|YP_002281568.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535407|gb|ACI55342.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 276 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 121/217 (55%), Gaps = 13/217 (5%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P+ L+ + VTL + IS + ++ +A R+ + +++ + + Y++ FRGTPLL Q Sbjct: 60 PRYLHG-LGVTLSLVFISVICGAVLSLPLAAARMS-KNRVLNALAYGYIYFFRGTPLLAQ 117 Query: 74 LFVIFYGL----PH---IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 LF+++YGL P +GI + +++ + ++T+N +AY +EI+R +I S+P GQ + Sbjct: 118 LFLVYYGLGVFRPQLEAVGIWWFFREAWYCGLFAMTINTAAYQAEILRGAIESVPHGQHE 177 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+G+ + R I+LPQ + + P +E I ++K ++V + IT+ ++ + S Sbjct: 178 AAAALGIHKFIAFRKIVLPQALIVALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFS 237 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T+ Y A YL++ + IE +T+H Sbjct: 238 RTFD-YQTYLWAAIFYLVIVEALRHLWAWIERRLTRH 273 >gi|302186713|ref|ZP_07263386.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae 642] Length = 217 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 58/152 (38%), Positives = 90/152 (59%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 T++ + Y+ FR TPL+VQL+V+F+ LP GI F + +I L ++AYI+E R Sbjct: 50 TVVHRLSKGYLSFFRNTPLMVQLYVLFFALPLAGITFPAITTGVIGLGCYYAAYIAEAYR 109 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++I IP GQW+A+ A+ R T R IILPQ + L + I + K T + + ITI Sbjct: 110 AAIDDIPAGQWEAARALDFNRGDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVITI 169 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PE+FQ A++I TY+ Y +A ++L ++ Sbjct: 170 PELFQAAKQIAGMTYRYNEPYTVMALMFLAIS 201 >gi|254713632|ref|ZP_05175443.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti M644/93/1] gi|254716014|ref|ZP_05177825.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti M13/05/1] gi|261217781|ref|ZP_05932062.1| ABC transporter [Brucella ceti M13/05/1] gi|261321371|ref|ZP_05960568.1| ABC transporter [Brucella ceti M644/93/1] gi|260922870|gb|EEX89438.1| ABC transporter [Brucella ceti M13/05/1] gi|261294061|gb|EEX97557.1| ABC transporter [Brucella ceti M644/93/1] Length = 240 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 56/151 (37%), Positives = 90/151 (59%), Gaps = 1/151 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV FR P +V L++ FYGLP +G+ + I+L S+Y +EIIR +I+++PKG Sbjct: 58 YVEWFRNIPFIVVLYLFFYGLPFMGVRLPESIVGTIALAFFASSYFAEIIRGAILAVPKG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ AIG++ Q + I+ PQT+ P ++ IS++K TSV STIT+ E+ Sbjct: 118 QMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETSVLSTITMAELTYQGLV 177 Query: 181 IVSTTYQPLIIYCELAFVYLILTS-FCYIIQ 210 I T+ P I+ A +Y ++T+ F Y++ Sbjct: 178 IQGETFAPFEIFLTTAAIYWMITAIFAYLMH 208 >gi|298379891|ref|ZP_06989496.1| glnP [Escherichia coli FVEC1302] gi|298279589|gb|EFI21097.1| glnP [Escherichia coli FVEC1302] Length = 159 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 93/155 (60%), Gaps = 2/155 (1%) Query: 66 RGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RGTP++VQ+ I++ LP + D F A ++++ +N AYI+EI R +++SI KG + Sbjct: 3 RGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFRE 62 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GL+R +TIR++ILP + PL +++I +K TS+ I + E+ + Q I++ Sbjct: 63 AGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIA 122 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 ++ L I+ +A YLI+T I ++E + Sbjct: 123 GNFRALEIWSAVAVFYLIITLVLSFILRRLERRMK 157 >gi|307132298|ref|YP_003884314.1| putative amino acid ABC transporter permease [Dickeya dadantii 3937] gi|306529827|gb|ADM99757.1| Putative amino acid ABC transporter, permease protein [Dickeya dadantii 3937] Length = 218 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 51/151 (33%), Positives = 87/151 (57%), Gaps = 3/151 (1%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + Y +F+GTPLL+QLF+ F+GL GI + A ++LTL SA++ +I S+ + Sbjct: 52 LTRLYADVFQGTPLLMQLFLAFFGLGLFGIDVSPWTAAALALTLFTSAFLLDIWHGSVQA 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +PKGQW+A +GL+ QT+ +I PQ + + P + ++K T++AS I E+ + Sbjct: 112 LPKGQWEACRCLGLSFTQTLTRVIAPQAMRIAIAPTVGFSVQVIKGTALASIIGFVELTK 171 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + + T+QP ++ +A Y +L CY Sbjct: 172 AGTMLNNVTFQPFKVFGLVALGYFLL---CY 199 >gi|229074425|ref|ZP_04207457.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock4-18] gi|228708709|gb|EEL60850.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock4-18] Length = 218 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ + +V R PL++ F+ ++ LP IGI Sbjct: 25 SVIALIGSFILGVILAVMRIA-PIRILNWVGSAFVEFVRNIPLVLIAFIFYFALPVIGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + +I+LPQ + Sbjct: 84 LNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYVQGMYYIVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|153811655|ref|ZP_01964323.1| hypothetical protein RUMOBE_02047 [Ruminococcus obeum ATCC 29174] gi|149832396|gb|EDM87481.1| hypothetical protein RUMOBE_02047 [Ruminococcus obeum ATCC 29174] Length = 223 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 109/200 (54%), Gaps = 8/200 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 II + LL A+ TL +A + I+G F ++ + + +I +V + RG Sbjct: 4 IITRYGNLLLLAMGQTLLLALCGLFFACILGMFFGLLSVL-KNKACRIISSIFVDVIRGV 62 Query: 69 PLLVQLFVIFYGLPH-----IGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 P++V + I++G+P+ +G F + A + L LN AY++EIIR+ I+S+ GQ Sbjct: 63 PMIVLAYFIYFGVPYCLNNMMGFNFTLTALQAGTVCLALNCGAYMAEIIRAGILSVDSGQ 122 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++GL + + ++LPQ I T + ++FI LK TS+ S I PE+ TA+ + Sbjct: 123 MEAARSLGLPYSRAMIRVVLPQAIRTMIPSIINQFIITLKDTSILSVIGFPELVNTAKNV 182 Query: 182 VSTTYQPLIIYCELAFVYLI 201 V+ ++ + +A +YLI Sbjct: 183 VANSFMSFQTWGIVAVMYLI 202 >gi|312882264|ref|ZP_07742010.1| ABC-type amino acid transport system permease component [Vibrio caribbenthicus ATCC BAA-2122] gi|309370108|gb|EFP97614.1| ABC-type amino acid transport system permease component [Vibrio caribbenthicus ATCC BAA-2122] Length = 246 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 115/209 (55%), Gaps = 9/209 (4%) Query: 2 KYEWFNLIIDSFPQ-------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII 54 YEW ++D + L T+ I+ IS + +++IG +A S +I Sbjct: 19 NYEWGWYVLDPRQEQGLANMLFLLKGFSDTIKISLISMLFAMLIGLLVA-FPALSSSGLI 77 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + YV I R P+LV L ++YGLP + + + F A +I+L++ SA+++E+ R Sbjct: 78 RGVNRTYVEIIRSVPVLVLLLWVYYGLPTLFDVSLNHFWAGVIALSIAESAFMAEVFRGG 137 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I +I +GQ +A++++GL QT+R +ILPQ + PL ++F+ ILK +S+ S I + + Sbjct: 138 IQAIRRGQHEAAHSLGLGYWQTMRLVILPQALRQILPPLGNQFVYILKMSSLVSVIGLSD 197 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + + A +V Y PL IY L YL+L Sbjct: 198 LTRRANELVVNEYLPLEIYTFLVIEYLVL 226 >gi|291616415|ref|YP_003519157.1| YhdY [Pantoea ananatis LMG 20103] gi|291151445|gb|ADD76029.1| YhdY [Pantoea ananatis LMG 20103] gi|327392855|dbj|BAK10277.1| amino acid ABC transporter permease protein YhdY [Pantoea ananatis AJ13355] Length = 225 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 53/154 (34%), Positives = 89/154 (57%), Gaps = 3/154 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 ++ ++ Y +F+GTPLL+QLF+ F+G+ GI + A ++LT SA++ +I S Sbjct: 56 LTRVIRAYTELFQGTPLLMQLFLAFFGVGLFGIDVAPWTAASLALTFYTSAFLLDIWHGS 115 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++PKGQW+AS +GL QT+ +I PQ I + P + ++K T++AS I E Sbjct: 116 IQALPKGQWEASRCLGLDFGQTLTRVIAPQAIRIAIAPTVGFAVQVIKGTALASIIGFVE 175 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + + + + TYQP ++ +A Y +L CY Sbjct: 176 LTKAGTILNNVTYQPFKVFGLVALGYFLL---CY 206 >gi|115375368|ref|ZP_01462631.1| glutamine ABC transporter substrate-binding protein [Stigmatella aurantiaca DW4/3-1] gi|115367652|gb|EAU66624.1| glutamine ABC transporter substrate-binding protein [Stigmatella aurantiaca DW4/3-1] Length = 435 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 121/212 (57%), Gaps = 8/212 (3%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + P++L + VTL + + + + G +A+ RI + L + Y+ +FRGTPLL Sbjct: 227 ALPRVLQG-LGVTLQLTLGAGGLGIAWGMLVALARISRRTGLRGLAVA-YITLFRGTPLL 284 Query: 72 VQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 +QL IF+ LP + GI A +I+L+LN +AYI+EI R++I SI KGQ +A+ A+G+ Sbjct: 285 LQLLFIFFALPIVAGIRMGPMAAGVIALSLNAAAYIAEIFRAAIESIDKGQMEAARALGM 344 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + + +R +ILPQT PL +E ++ K TS+ I +PE+ +++ T +P Sbjct: 345 SHELAMRRVILPQTFRRLIPPLVNELAALSKDTSLVMVIALPEMLYETKQLAGTYLRPE- 403 Query: 191 IYCELAFVYLI----LTSFCYIIQIKIESSVT 218 +Y A YL+ L++ ++ ++E+ T Sbjct: 404 VYAWAAIGYLLIVAALSALAQRLERRLEARGT 435 >gi|83952546|ref|ZP_00961277.1| ABC polar amino acid transporter, inner membrane subunit [Roseovarius nubinhibens ISM] gi|83836219|gb|EAP75517.1| ABC polar amino acid transporter, inner membrane subunit [Roseovarius nubinhibens ISM] Length = 232 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 104/173 (60%), Gaps = 2/173 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +++ P +L A + VT+ ++ + ++ + +G +A +R + + LI+ F +F Sbjct: 19 WEVLVKYAPSIL-AGVGVTVWLSVLIILVGMTLGTLLACLRAYRVGPLSFLIVVFAD-VF 76 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R P LV + ++F+GLP+ GI +F+ + + LTL +A+ EI+ + I S+ KGQW+A+ Sbjct: 77 RALPPLVVILLVFFGLPNAGIYLSAFMVLFVVLTLILAAFAEEILWAGITSVDKGQWEAA 136 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 + GL QT+ ++ILPQ + + PL++ I+I K T++ + I +P+I A Sbjct: 137 RSTGLGFTQTLGYVILPQAMRLAIPPLTNRAIAITKMTALGTVIGVPDILNQA 189 >gi|291542753|emb|CBL15863.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ruminococcus bromii L2-63] Length = 508 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 119/209 (56%), Gaps = 17/209 (8%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF------------FSDTII-- 54 I D+ Q L + ++VTL I + +I +IIGF IA++R F D ++ Sbjct: 282 ITDNRWQQLLSGLLVTLEITLFAAIIGVIIGFVIALVRATHDIQLDKRKCKSFGDCVLKF 341 Query: 55 -SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 ++I + Y+ + RGTP++VQL +++Y + + V + A II+ +N +AY++EI+RS Sbjct: 342 FNVICNIYITVIRGTPVVVQLMIMYYII--LASVRNGIFAAIIAFGMNSAAYVAEIVRSG 399 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I+++ GQ +AS ++G +QT+ ++LPQ I L +E I++LK TSVA + + + Sbjct: 400 IMAVDIGQTEASRSLGFNNRQTMTMVVLPQAIKNVLPALGNEIITLLKETSVAGYVALAD 459 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 I I S TY+ +A +YL++ Sbjct: 460 ITYIGNMIRSRTYEAFFPLITVALIYLVI 488 >gi|239834956|ref|ZP_04683284.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239823019|gb|EEQ94588.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 308 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 75/223 (33%), Positives = 121/223 (54%), Gaps = 26/223 (11%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P +L A + TL + + + IG +AV+R+ ++ ++ ++W FRG P LVQ Sbjct: 63 PDIL-AGLARTLFLTFAAMIFGFAIGIILAVMRLS-ANPVLQWASWLWIWFFRGVPPLVQ 120 Query: 74 LFVIFYGL----PH--IGIVFDS-------------FVAIIISLTLNFSAYISEIIRSSI 114 L + +Y L P+ IGI F A ++ L+ SAY +E IR+ I Sbjct: 121 L-IFWYNLALLVPNLTIGIPFGPTLWSWDMNTLITPMSAALLGLSFTESAYAAETIRAGI 179 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +I GQ +A+ +G+TR Q ++ I+LPQ I P+ ++ IS+LK TS+ S + +P++ Sbjct: 180 QAINPGQTEAAATLGMTRFQIMKRIVLPQAIRIIIPPIGNDTISMLKFTSLVSVLALPDL 239 Query: 175 FQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIES 215 +AQ I S TYQ PL+I + YLIL++ II+ IE+ Sbjct: 240 LYSAQMIYSRTYQTIPLLIVATI--WYLILSTALTIIEHHIEN 280 >gi|163789691|ref|ZP_02184128.1| glutamine ABC transporter permease component [Carnobacterium sp. AT7] gi|159874913|gb|EDP68980.1| glutamine ABC transporter permease component [Carnobacterium sp. AT7] Length = 215 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 104/179 (58%), Gaps = 1/179 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I+ ++P +L + TL + I+ SLIIG +A++++ + IS + + YV F+ Sbjct: 4 ILTTYPDVLIDGFLNTLYSSIIALFFSLIIGTLMAILQLS-KNKWISGLANAYVEFFKNI 62 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+ + + +P + F A I LT+ SA+I+E +R+ I+ +PKGQ +A + Sbjct: 63 PLLIIVMFFYVVVPLYWFSINGFTAGTIGLTIYTSAFIAETVRAGIMGVPKGQTEAGLST 122 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GLT+ +T+R+I+LPQ PL ++FI+++K++SV + +T ++ I S T+ Sbjct: 123 GLTQNETMRYIVLPQAFKIVIPPLGNQFINLVKNSSVLAMVTGLDLMYQGDLIASETFN 181 >gi|304405837|ref|ZP_07387495.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] gi|304345080|gb|EFM10916.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] Length = 220 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 6/182 (3%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 Y F+LI + A TL +A IS + +IG ++ I +F++ ++ + Y Sbjct: 3 NYSAFDLI-----PIFAKASATTLMVASISIFFAFLIGL-LSSIALFYNAPVLKPAIRAY 56 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V FR TP LVQ + IFYGLP I + FDS+ I+ L+L AY+ E I S + +I Q Sbjct: 57 VEFFRNTPSLVQAYFIFYGLPKISLQFDSYTCSILVLSLLGGAYMCEAIHSGMKAISANQ 116 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 + + ++GL+R TI ++ILPQ ++TS +++ I + K S I +PEI A I Sbjct: 117 LELAKSMGLSRFNTIIYLILPQALSTSIAAVNNNSIFLTKEVSAMKIILLPEIVYQAFAI 176 Query: 182 VS 183 +S Sbjct: 177 IS 178 >gi|303253514|ref|ZP_07339653.1| arginine transporter permease subunit ArtQ [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248385|ref|ZP_07530408.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302647624|gb|EFL77841.1| arginine transporter permease subunit ArtQ [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855123|gb|EFM87303.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 223 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 114/211 (54%), Gaps = 8/211 (3%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L+Y+A ++TL +A S ++ L++ V+ IS ++ + RG P ++ + Sbjct: 8 LIYSATLMTLGLALTSLIVGLLLSMLFVVLETN-KQPCISKPTSVFLALLRGLPEILVVL 66 Query: 76 VIFYGLPHI-----G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +IF+G + G + F +F +++L+L FSAY S+ +R +I ++P GQW++ A+ Sbjct: 67 LIFFGSTELVEKITGEYVEFSAFSCGVLALSLIFSAYASQSLRGAIQAVPNGQWESGAAL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+R T II+PQ + LS++++ +LK T++ S I + ++ + I + +QP Sbjct: 127 GLSRAHTFLRIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLMRQTDLINTNEHQP 186 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 Y A +YL +T +I +E T+ Sbjct: 187 FTWYGLAALIYLAITLISQVIIAGLEKRFTR 217 >gi|89899050|ref|YP_521521.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89343787|gb|ABD67990.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 217 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 107/198 (54%), Gaps = 15/198 (7%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTIISLIMHFYVWI 64 F +L VVT+ + +++ ++G A++R+ FS +I+ I Sbjct: 11 EFAPILAQGAVVTVEVFACGLIVATLLGLVWALMRVSGVAALAVFSKGLINTI------- 63 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RG P+LVQLF I++ LP +GI +F A I L +S Y++E+ R I ++ GQ +A Sbjct: 64 -RGIPILVQLFFIYFVLPDVGIQLSAFQAGFIGLGFAYSCYMAEVFRGGIEAVDPGQVEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G+ R T+ ++LPQ + P + I ++K TS AS IT+ E+ ++ I ++ Sbjct: 123 AKSLGMGRAMTMWRVVLPQAFKVALPPYGNTCIMLIKDTSQASIITVTELTFQSKVIAAS 182 Query: 185 TYQPLIIYCELAFVYLIL 202 T++ ++ +A YL+L Sbjct: 183 TFKNAEVFTLVALFYLLL 200 >gi|27381509|ref|NP_773038.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110] gi|27354677|dbj|BAC51663.1| blr6399 [Bradyrhizobium japonicum USDA 110] Length = 222 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 102/173 (58%), Gaps = 3/173 (1%) Query: 34 ISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 IS+++GF I ++ + + ++++ Y+ I R TP LVQ+ I++GLP +G+ + Sbjct: 30 ISVLLGFTIGLLTVLARRSSLRALNVLAIGYIEIIRNTPFLVQVLFIYFGLPALGLSLAA 89 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 + A +I+L+LN A+ +EIIR I IP+GQ++A A+GL Q +R I+ + Sbjct: 90 WPAGVIALSLNAGAFAAEIIRGGIDGIPRGQFEAGAALGLHPFQVLRFIVFKPALRAIYP 149 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L+S+F+ +L ++S+ S I+ E+ AQ + + T++ IY +YL++ Sbjct: 150 ALASQFVLLLLTSSIVSAISAEELTAAAQSVDTLTFRSFEIYIVATLLYLLMA 202 >gi|299535149|ref|ZP_07048474.1| amino acid ABC transporter, permease protein [Lysinibacillus fusiformis ZC1] gi|298729466|gb|EFI70016.1| amino acid ABC transporter, permease protein [Lysinibacillus fusiformis ZC1] Length = 218 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 50/138 (36%), Positives = 87/138 (63%), Gaps = 5/138 (3%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI-----VFDSFVAIIISLTLNFSAYISE 108 ++ + H Y++I RGTPLL+QL +I +GLP + + V D FVA + LN++AY +E Sbjct: 48 LAWLAHTYIYIMRGTPLLLQLLLICFGLPMLPVIGEYLVLDRFVAACLGFILNYAAYFAE 107 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I R +++I KGQ++A+ +GL++ QT +ILPQ + LS+E ++++K T++ Sbjct: 108 IFRGGLLAIDKGQYEAAQVLGLSKWQTTTRVILPQMFRVALPALSNESVTLIKDTALLYA 167 Query: 169 ITIPEIFQTAQRIVSTTY 186 + +PE+ AQ V+ + Sbjct: 168 VAVPELLHFAQTAVNRDF 185 >gi|114707668|ref|ZP_01440563.1| amino acid ABC transporter, permease protein [Fulvimarina pelagi HTCC2506] gi|114536912|gb|EAU40041.1| amino acid ABC transporter, permease protein [Fulvimarina pelagi HTCC2506] Length = 269 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 116/211 (54%), Gaps = 12/211 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ + SFV I+ IA R+ S T + +V+ FRGTPL+ Q+F+++Y Sbjct: 58 GLWVTVSLVVSSFVCGAILSVPIAFGRMAESRTA-RVPSFLFVYFFRGTPLIAQIFLVYY 116 Query: 80 G-------LPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 G L IG+ + +++ + ++ LN +AY +EI+R +I S+PKGQW+ ++G Sbjct: 117 GFGEFRGFLDSIGLWWFFREAWFCALFTIALNSAAYQAEILRGAIESVPKGQWEGGRSLG 176 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 ++R I+LPQ + + P ++E I ++K +++ + IT+ ++F ++ + T+ Sbjct: 177 ISRSVIFSRIVLPQAMIVALRPYANELILLIKGSAIVAIITVYDLFGITRQAYARTFD-F 235 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y A +YL++ + E+ VT+H Sbjct: 236 QTYVWAAVLYLVVVEILRRLTNFAEARVTRH 266 >gi|307250612|ref|ZP_07532553.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857353|gb|EFM89468.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 223 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 113/211 (53%), Gaps = 8/211 (3%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L+Y+A ++TL +A S ++ L++ V+ IS ++ + RG P ++ + Sbjct: 8 LIYSATLMTLGLALTSLIVGLLLSMLFVVLETN-KQPCISKPTSVFLALLRGLPEILVVL 66 Query: 76 VIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +IF+G L + F +F +++L+L FSAY S+ +R +I ++P GQW++ A+ Sbjct: 67 LIFFGSTELVEKLTGEYVEFSAFSCGVLALSLIFSAYASQSLRGAIQAVPNGQWESGAAL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+R T II+PQ + LS++++ +LK T++ S I + ++ + I + +QP Sbjct: 127 GLSRAHTFLRIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLMRQTDLINTNEHQP 186 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 Y A +YL +T +I +E T+ Sbjct: 187 FTWYGLAALIYLAITLISQVIIAGLEKRFTR 217 >gi|291529899|emb|CBK95484.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Eubacterium siraeum 70/3] Length = 247 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/185 (32%), Positives = 103/185 (55%), Gaps = 21/185 (11%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L ++ T+ I + + S+ +G +A +++ I S + + Y+ I RGTPL++Q+ Sbjct: 24 ILLENLIPTIKIFGFTLLFSIPLGLIVAALKMCRFKPI-SWLTNLYILIMRGTPLMLQII 82 Query: 76 VIFYGLPHI-------GIVFDS-------------FVAIIISLTLNFSAYISEIIRSSII 115 V++Y LP + G +S F +II+ LN++AY +EI R I Sbjct: 83 VVYYALPFLKTATKGSGGFVESLLSGVDPAAESFMFTMVIIAFVLNYAAYFAEIFRGGIE 142 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SIP+GQ++A+ A+G+T+ QT IILPQ I S+E I+++K TS+A+ + EI Sbjct: 143 SIPRGQYEAAAALGMTKAQTFFRIILPQVIKRIVPASSNEVITLVKDTSLANVVAYSEIM 202 Query: 176 QTAQR 180 A++ Sbjct: 203 LAAKQ 207 >gi|238784128|ref|ZP_04628142.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia bercovieri ATCC 43970] gi|238714974|gb|EEQ06972.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia bercovieri ATCC 43970] Length = 190 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 55/142 (38%), Positives = 85/142 (59%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YVWI RGTP L QL + ++GLP IG+ + A ++SL + SAY EI R++ SI +G Sbjct: 31 YVWIIRGTPYLAQLALFYFGLPAIGVTLTAVEATVLSLAIYSSAYFGEIFRTAWKSIGQG 90 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++ ++ HI PQ + S L ++FI +K ++VAS IT+PE+ T + Sbjct: 91 QLEAAQVHDISAWKSFWHIQTPQALRFSLPLLGNQFILTIKESAVASIITVPELTMTTGQ 150 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 IV+ TY ++ Y L Y +L Sbjct: 151 IVANTYTYIVPYTLLILSYWLL 172 >gi|224368336|ref|YP_002602499.1| ABC-type arginine/histidine transport system, permease component [Desulfobacterium autotrophicum HRM2] gi|223691052|gb|ACN14335.1| ABC-type arginine/histidine transport system, permease component [Desulfobacterium autotrophicum HRM2] Length = 233 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 126/224 (56%), Gaps = 12/224 (5%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++II++ P+ L I+ TL I +S +I ++ ++++R+ + +I + + + FR Sbjct: 4 SIIINTLPRFLNGTIL-TLEITALSVIIGFVLAIPLSIMRVS-KNPLIRMPAFCFNFYFR 61 Query: 67 GTPLLVQLFVIFYG-------LPHIGI---VFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 GTPLLVQLF+I+YG L IG+ +++ ++SLTLN +AY SEI R I Sbjct: 62 GTPLLVQLFLIYYGSGQFQSFLSDIGLWQFFREAYFCAVLSLTLNTAAYSSEIFRGGIEG 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P G+ +A+ A G++ R II+P + + ++E + +L+++S+ S IT+ +I Sbjct: 122 VPFGEIEAARACGMSGILLYRRIIMPAALRIAWPAYTNEVVFLLQASSLVSIITLMDITG 181 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 A+ + + ++ ++ A +YLIL + +IE +T H Sbjct: 182 VARVVSARSFAFYELFITAAVIYLILVYGLIFVFKRIERKITAH 225 >gi|145631225|ref|ZP_01786998.1| arginine ABC transporter permease protein [Haemophilus influenzae R3021] gi|144983152|gb|EDJ90647.1| arginine ABC transporter permease protein [Haemophilus influenzae R3021] Length = 221 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 121/224 (54%), Gaps = 10/224 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + F L++ A ++TL +A S ++ L + AV+ ++ I M +V + RG Sbjct: 1 MFSDFLSLMFTAALMTLGLAVCSLLLGLFLSLIFAVLE---ANRFIGKPMTVFVALLRGL 57 Query: 69 PLLVQLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 P ++ + ++++G L I F +F +++L+L F+AY S+ +R +I +IPKGQ Sbjct: 58 PEIIVVLLVYFGSTELVEMLTGEYIEFGAFGCGVLALSLIFAAYASQTLRGAIQAIPKGQ 117 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W++ A+GL++ T HI++PQ + LS++++ +LK T++ S I + ++ + A I Sbjct: 118 WESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLMRQADLI 177 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + T+QP Y A +YL +T + K+E T+ V Sbjct: 178 NTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFERGVK 221 >gi|291003747|ref|ZP_06561720.1| ABC transporter, nucleotide binding/ATPase protein [Saccharopolyspora erythraea NRRL 2338] Length = 791 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 112/196 (57%), Gaps = 8/196 (4%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 +L AA++V + +A +++ I+ ++G +A+++ ++S+ YVW FR PLLV L Sbjct: 301 ELWNAALMVAV-LAVLAWSIATVLGMGLALLK-RSELRVLSVPASGYVWFFRSLPLLV-L 357 Query: 75 FVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 + Y LP + ++ FV +++L L+ +AYI+EI R + S+ GQ +A+ A+G Sbjct: 358 LIFIYNLPQVIPELRPVLGSPFVVGLVALVLSETAYIAEIHRGGLKSVSVGQGEAARALG 417 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 + R +++PQ + L ++FI+ILK TS+ S+I++ EI QR+ + ++ L Sbjct: 418 IPYGGVQRLVVIPQAFRVALPALGNQFITILKLTSLVSSISLAEILLVGQRLYTQNFKVL 477 Query: 190 IIYCELAFVYLILTSF 205 ++ Y++L + Sbjct: 478 ETLLAVSIFYVVLVTL 493 >gi|261380100|ref|ZP_05984673.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria subflava NJ9703] gi|284797319|gb|EFC52666.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria subflava NJ9703] Length = 248 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/190 (33%), Positives = 105/190 (55%), Gaps = 26/190 (13%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVI------FYGLPHIGIV------------FDSFVAI 94 ++ I +YV +FRGTPL VQ+ + F+ P G++ + + +A Sbjct: 61 VLRKISFWYVTLFRGTPLFVQIVIWAYVWFPFFVHPADGVLISGEAAVDLRRSYGALIAG 120 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 ++L N AYI EI R+ I SI KGQ +A+ ++GLT Q +R++ILPQ + PL+S Sbjct: 121 SLALVANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYTQAMRYVILPQALRRMLPPLAS 180 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE----LAFVYLILTSFCYIIQ 210 EFI++LK +S+ S I + E+ Q ++ Y +Y E +A +YL+LTSF + Sbjct: 181 EFITLLKDSSLLSVIGVAEL-AYVQSTITGRYS---VYEEPLYTIALIYLVLTSFLGWVF 236 Query: 211 IKIESSVTQH 220 +++E+ H Sbjct: 237 LRLENRYNPH 246 >gi|194398286|ref|YP_002037360.1| ABC transporter permease [Streptococcus pneumoniae G54] gi|194357953|gb|ACF56401.1| ABC transporter, permease protein [Streptococcus pneumoniae G54] Length = 226 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 105/194 (54%), Gaps = 1/194 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A +TL IA + S ++G +++IR + +++ + Y+ + R T Sbjct: 5 IVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIR-HYRIPVLAQVATAYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IGIV S V + L +Y++E RS + +I + Q + AI Sbjct: 64 PLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q R+++LPQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183 Query: 189 LIIYCELAFVYLIL 202 I L YLI+ Sbjct: 184 DIALAMLVXAYLIM 197 >gi|134102290|ref|YP_001107951.1| ABC transporter, nucleotide binding/ATPase protein [Saccharopolyspora erythraea NRRL 2338] gi|133914913|emb|CAM05026.1| ABC transporter, nucleotide binding/ATPase protein [Saccharopolyspora erythraea NRRL 2338] Length = 780 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 112/196 (57%), Gaps = 8/196 (4%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 +L AA++V + +A +++ I+ ++G +A+++ ++S+ YVW FR PLLV L Sbjct: 290 ELWNAALMVAV-LAVLAWSIATVLGMGLALLK-RSELRVLSVPASGYVWFFRSLPLLV-L 346 Query: 75 FVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 + Y LP + ++ FV +++L L+ +AYI+EI R + S+ GQ +A+ A+G Sbjct: 347 LIFIYNLPQVIPELRPVLGSPFVVGLVALVLSETAYIAEIHRGGLKSVSVGQGEAARALG 406 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 + R +++PQ + L ++FI+ILK TS+ S+I++ EI QR+ + ++ L Sbjct: 407 IPYGGVQRLVVIPQAFRVALPALGNQFITILKLTSLVSSISLAEILLVGQRLYTQNFKVL 466 Query: 190 IIYCELAFVYLILTSF 205 ++ Y++L + Sbjct: 467 ETLLAVSIFYVVLVTL 482 >gi|301155143|emb|CBW14607.1| unnamed protein product [Haemophilus parainfluenzae T3T1] Length = 219 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 103/182 (56%), Gaps = 2/182 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++ I+ P+ ++A ++ TL +A ++SL+IG AVI + ++ L+ Y+ + Sbjct: 3 WDYILSVTPRFIHATLM-TLHLAFWGILLSLVIGVICAVITTYKVKSLTWLVKG-YIELS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL+Q+F +++GL IG+ D F II L +Y++E R + ++ KGQ +++ Sbjct: 61 RNTPLLIQVFFLYFGLSKIGLKLDGFTCGIIGLAFLGGSYMAEAFRGGLEAVSKGQIESA 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IGLT Q R++I PQ + + + + ++K TSV S + + E+ A+ ++ Sbjct: 121 LSIGLTPYQAFRYVIFPQAFAIATPAIGANCLFLMKETSVISAVAVAELMFVAKEVIGLD 180 Query: 186 YQ 187 Y+ Sbjct: 181 YK 182 >gi|224418906|ref|ZP_03656912.1| ABC transporter membrane-spanning permease - glutamine transport [Helicobacter canadensis MIT 98-5491] gi|253827859|ref|ZP_04870744.1| glutamine ABC transporter permease GlnP [Helicobacter canadensis MIT 98-5491] gi|313142420|ref|ZP_07804613.1| polar amino acid ABC transporter [Helicobacter canadensis MIT 98-5491] gi|253511265|gb|EES89924.1| glutamine ABC transporter permease GlnP [Helicobacter canadensis MIT 98-5491] gi|313131451|gb|EFR49068.1| polar amino acid ABC transporter [Helicobacter canadensis MIT 98-5491] Length = 222 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 101/168 (60%), Gaps = 1/168 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+ +TL ++ V S+++GFFIA+++ F+ +S + Y+ + R TPLL+QLF ++Y Sbjct: 21 ALWLTLHLSFFGIVFSILLGFFIALVQ-FYKVRFLSALCQAYIELSRNTPLLIQLFFLYY 79 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP +G+ S+ +I + +Y++E R+ + S+ + Q ++ ++GL+ Q + ++ Sbjct: 80 GLPQVGLQLTSYTCALIGVIFLGGSYMAESFRAGLESVGRIQLESGRSLGLSEMQLMFYV 139 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +LPQ++ S + + I +LK TSV S I + +I + ++ + Y+ Sbjct: 140 VLPQSLAVSLPFIGANAIFLLKETSVVSAIALADILYITKDLIGSYYK 187 >gi|302335554|ref|YP_003800761.1| amino acid ABC transporter membrane protein, PAAT family [Olsenella uli DSM 7084] gi|301319394|gb|ADK67881.1| amino acid ABC transporter membrane protein, PAAT family [Olsenella uli DSM 7084] Length = 217 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/176 (32%), Positives = 108/176 (61%), Gaps = 11/176 (6%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L VV+L I ++ + ++ +G +A+ R+ +S + Y+ + RGTPL++Q+F Sbjct: 9 MLVQGYVVSLQIFLLTLLGAVPLGVIVALGRLS-KFRPLSFLTGLYISLMRGTPLMLQMF 67 Query: 76 VIFYGLPHIGIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +F+ +P+ VF FVA++I+ +N++AY +EI RS I S+P+GQ++A+ + Sbjct: 68 AVFF-IPYY--VFGQQTGPSYMFVAVMIAFIVNYAAYFAEIYRSGIQSMPQGQYEAAQVL 124 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 G +R QT IILPQ + +E ++++K TS+A +I I E+F T++ +V++ Sbjct: 125 GYSRSQTFFGIILPQVFKRILPAMGNEVVTLVKDTSLAFSIGIAEMFTTSRALVAS 180 >gi|270291410|ref|ZP_06197632.1| ABC-type amino acid transport system, permease and periplasmic component [Pediococcus acidilactici 7_4] gi|270280256|gb|EFA26092.1| ABC-type amino acid transport system, permease and periplasmic component [Pediococcus acidilactici 7_4] Length = 495 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/180 (33%), Positives = 108/180 (60%), Gaps = 9/180 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I+ + IIG +A++R+ T + I YV RGTPL+VQL ++++GL Sbjct: 303 TILISLVGVCFGSIIGALLALMRLS-RHTSLRAIALAYVEFVRGTPLMVQLMLVYFGL-- 359 Query: 84 IGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 GIV + + A +I+++LN +AY++E+IR I S+ +GQ +A+ ++GL + +R ++L Sbjct: 360 -GIVVNLPALTAGMIAVSLNSAAYVAEVIRGGINSVDEGQVEAAQSLGLNYQDRLRFVVL 418 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCELAFV 198 PQ + L +EFIS++K +S+ S I + ++ + + S TY+ P+++ L FV Sbjct: 419 PQALKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLKIVQSDTYRGVAPILVAMVLYFV 478 >gi|238797419|ref|ZP_04640918.1| Histidine transport system permease protein hisQ [Yersinia mollaretii ATCC 43969] gi|238718690|gb|EEQ10507.1| Histidine transport system permease protein hisQ [Yersinia mollaretii ATCC 43969] Length = 228 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 117/229 (51%), Gaps = 15/229 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D + +L++ +VTL +A S ++S+IIG A ++ S+ ++S + Y + RG Sbjct: 1 MLDGYSKLIFEGALVTLELALCSVLLSVIIGLMGAGGKLS-SNRLLSGLFECYTTLIRGV 59 Query: 69 PLLVQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 P LV + +IFYGL IG I D A II+L + AY +E R + +++ Sbjct: 60 PDLVLMLLIFYGLQIALNSITESIGFEQINIDPLSAGIITLGFIYGAYFTETFRGAYMAV 119 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +A+ A G T Q R I+ P + + + + + ILK+T++ S + + ++ + Sbjct: 120 PAGQIEAARAFGFTSSQIFRRILFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKA 179 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 Q TYQP VYLI T+ + + +E ++++ V + Sbjct: 180 TQLAGKGTYQPFFFALVAGAVYLIFTTISNGVLLWLER---RYSHGVKR 225 >gi|238785201|ref|ZP_04629193.1| Histidine transport system permease protein hisQ [Yersinia bercovieri ATCC 43970] gi|238713879|gb|EEQ05899.1| Histidine transport system permease protein hisQ [Yersinia bercovieri ATCC 43970] Length = 228 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/228 (28%), Positives = 114/228 (50%), Gaps = 12/228 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D + +L++ +VTL +A S ++S+IIG A ++ S+ ++S + Y + RG Sbjct: 1 MLDGYSKLIFEGALVTLELALCSVLLSVIIGLMGAGGKLS-SNRLLSGLFECYTTLIRGV 59 Query: 69 PLLVQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 P LV + +IFYGL +G I D A II+L + AY +E R + +++ Sbjct: 60 PDLVLMLLIFYGLQITLNSVTESLGFEQINIDPLSAGIITLGFIYGAYFTETFRGAYMAV 119 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +A+ A G T Q R I+ P + + + + + ILK+T++ S + + ++ + Sbjct: 120 PAGQIEAATAFGFTPSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKA 179 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 Q TYQP VYLI T+ + + +E +Q + Sbjct: 180 TQLAGKGTYQPFFFALVAGAVYLIFTTLSNGVLLWLERRYSQGVKRAE 227 >gi|152979605|ref|YP_001345234.1| polar amino acid ABC transporter, inner membrane subunit [Actinobacillus succinogenes 130Z] gi|150841328|gb|ABR75299.1| polar amino acid ABC transporter, inner membrane subunit [Actinobacillus succinogenes 130Z] Length = 219 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 102/179 (56%), Gaps = 2/179 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I D+ P+ + A ++TL ++ S ++S+I+G AV + + ++ Y+ + R T Sbjct: 6 IGDAVPRFI-DATLLTLHLSLWSIILSIIVGMLCAVA-LVHKIRGLQWMVKAYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+Q+F +++GL IGI D F II L +Y++E R+ + ++ KGQ +++ ++ Sbjct: 64 PLLIQVFFLYFGLSKIGIRLDGFTCGIIGLAFLGGSYMAEAFRAGLEAVSKGQIESALSL 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GLT +Q R++I PQ S + + + ++K TSV S I + E+ A+ I+ Y+ Sbjct: 124 GLTPQQAFRYVIFPQAFAISTPAIGANCLFLMKETSVISAIAVAELMFLAKDIIGMDYK 182 >gi|304385122|ref|ZP_07367468.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Pediococcus acidilactici DSM 20284] gi|304329316|gb|EFL96536.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Pediococcus acidilactici DSM 20284] Length = 495 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/180 (33%), Positives = 108/180 (60%), Gaps = 9/180 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I+ + IIG +A++R+ T + I YV RGTPL+VQL ++++GL Sbjct: 303 TILISLVGVCFGSIIGALLALMRLS-RHTSLRAIALAYVEFVRGTPLMVQLMLVYFGL-- 359 Query: 84 IGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 GIV + + A +I+++LN +AY++E+IR I S+ +GQ +A+ ++GL + +R ++L Sbjct: 360 -GIVVNLPALTAGMIAVSLNSAAYVAEVIRGGINSVDEGQVEAAQSLGLNYQDRLRFVVL 418 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCELAFV 198 PQ + L +EFIS++K +S+ S I + ++ + + S TY+ P+++ L FV Sbjct: 419 PQALKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLKIVQSDTYRGVAPILVAMVLYFV 478 >gi|300313889|ref|YP_003777981.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300076674|gb|ADJ66073.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 277 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 117/198 (59%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ + +P L+ A + TL + ++ ++ + IG F+A + ++ Y+ + Sbjct: 7 FSPLAPYWPVFLHGAWL-TLKMTTLAVIVGVAIGIFVAFAK-NSPHRWLARGCSAYIEVV 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP LVQ+F++++GL +GI +F A ++++ +N +AY +EIIR+ + S+P+GQ +A+ Sbjct: 65 RNTPFLVQIFLLYFGLASLGIRMPTFAAAVLAMIINIAAYAAEIIRAGLDSVPRGQIEAA 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GL+ + H++L I L+S+F+ +++++++AS I+ E+ A + S T Sbjct: 125 QCLGLSVWRIRWHVMLQPAIERVYPALTSQFLLMMQASAMASQISAEELTAIANTVQSDT 184 Query: 186 YQPLIIYCELAFVYLILT 203 ++ L Y +A +YL+L Sbjct: 185 FRSLETYLVVAALYLVLA 202 >gi|295111595|emb|CBL28345.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Synergistetes bacterium SGP1] Length = 220 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 109/196 (55%), Gaps = 5/196 (2%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N + F ++L A+ TL + + F+ +L +G + + I + ++ + YV FR Sbjct: 4 NFVGQVFLKML-PALPRTLSVTVLPFIAALFLGLMVT-LPIVYKIPVLKPLCKVYVSFFR 61 Query: 67 GTPLLVQLFVIFYGLPHIGI---VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 GTP + QLF+I++GLP + D ++++ LN SAY+SEIIR + +++ +GQ + Sbjct: 62 GTPFIGQLFMIYFGLPRMFACLSAMDKIEGFVLTMALNSSAYLSEIIRGAFLAVDRGQIE 121 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +I L+R QT+R I++PQ I + + + I +K +S+A TI I +I A+ Sbjct: 122 AAKSINLSRMQTLRLIVIPQAIPVAVPGIVNVLIDAIKGSSLAFTIGILDITAVAKIQAG 181 Query: 184 TTYQPLIIYCELAFVY 199 T++ Y + +Y Sbjct: 182 ITFRYFEAYMAMVMMY 197 >gi|283455572|ref|YP_003360136.1| ABC transporter permease [Bifidobacterium dentium Bd1] gi|283102206|gb|ADB09312.1| Permease protein of ABC transporter system [Bifidobacterium dentium Bd1] Length = 240 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 102/190 (53%), Gaps = 30/190 (15%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-----PHIGI----------------VFD 89 + ++ + FY+W FRGTP+ QL +F+GL P IGI V Sbjct: 11 NPVLRGVSWFYIWFFRGTPVYTQL--VFWGLFAVLIPRIGIGIPFTSIEFWSVDSQSVIT 68 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 +F A + L LN +AY++EI+R+ + ++ GQ +A+ A+G+ R +R I+LPQ + Sbjct: 69 AFNAAWLGLVLNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRSLIMRRIVLPQAMRIII 128 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT-YQP---LIIYCELAFVYLILTSF 205 P +EFI +LK+TS+ + + Q A ++T Y+P LI+ C YL++TS Sbjct: 129 PPTGNEFIGMLKTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVAC---IWYLVITSI 185 Query: 206 CYIIQIKIES 215 IIQ ++E Sbjct: 186 LMIIQSRLEK 195 >gi|15802854|ref|NP_288881.1| histidine transport, membrane protein M [Escherichia coli O157:H7 EDL933] gi|25296580|pir||H85871 histidine transport, membrane protein M [imported] - Escherichia coli (strain O157:H7, substrain EDL933) gi|12516663|gb|AAG57436.1|AE005462_11 histidine transport, membrane protein M [Escherichia coli O157:H7 str. EDL933] Length = 238 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 114/213 (53%), Gaps = 11/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + +S VI + F+A+ R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLILSVVIGGXLALFLAIGRVS-SNKYIQFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ Sbjct: 79 YSGMYTLEIVKGTEFLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARX 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I + TYQ Sbjct: 139 YGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P + A +YLI++ + + E QH Sbjct: 199 PFTAFGIAAVLYLIISYVLISLFRRAEKRWLQH 231 >gi|325121843|gb|ADY81366.1| polar amino acid transport system permease protein [Acinetobacter calcoaceticus PHEA-2] Length = 211 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 103/175 (58%), Gaps = 2/175 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 PQ ++A + TL I+ IS ++++I+G I I I + +++ I FY+ + R TPLL+ Sbjct: 2 LPQF-FSATLTTLKISIISIILAIIVGV-ICSILITYRVRVLNRIAQFYIELSRNTPLLI 59 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF ++YGLP +GI D F +I LT +Y++E R+ + S+ KGQ D++ +IGL Sbjct: 60 QLFFLYYGLPKLGIKIDGFACGVIGLTFLGGSYMAEAFRAGLQSVAKGQIDSAKSIGLQP 119 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 Q R++I PQ + S + + + ++K +SV S I + E+ + ++ Y+ Sbjct: 120 IQIFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKDLIGMDYK 174 >gi|145633092|ref|ZP_01788824.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae 3655] gi|144986318|gb|EDJ92897.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae 3655] Length = 221 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 120/218 (55%), Gaps = 10/218 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + F L++ A ++TL +A S ++ L + +AV+ ++ + M +V + RG Sbjct: 1 MFSDFLSLMFTAALMTLGLAVCSLLLGLFLSLILAVLE---ANRFVGKPMTVFVALLRGL 57 Query: 69 PLLVQLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 P ++ + ++++G L I F +F + +L+L F+AY S+ +R +I +IPKGQ Sbjct: 58 PEIIVVLLVYFGSTELVEMLTGEYIEFGAFGCGVFALSLIFAAYASQTLRGAIQAIPKGQ 117 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W++ A+GL++ T HI++PQ + LS++++ +LK T++ S I + ++ + A I Sbjct: 118 WESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLMRQADLI 177 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + T+QP Y A +YL +T + K+E T+ Sbjct: 178 NTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTR 215 >gi|238019790|ref|ZP_04600216.1| hypothetical protein VEIDISOL_01665 [Veillonella dispar ATCC 17748] gi|237863314|gb|EEP64604.1| hypothetical protein VEIDISOL_01665 [Veillonella dispar ATCC 17748] Length = 229 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/195 (32%), Positives = 115/195 (58%), Gaps = 9/195 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I +FPQLL + VT+ I IS ++ +I+G IA+IR+ + L + F + RGT Sbjct: 1 MIQAFPQLL-NYVHVTVLITVISAILGVILGSIIAIIRLKKVPVLNQLFIVF-ISFMRGT 58 Query: 69 PLLVQLFVIFYGLP----HIGIVFDSFVAIIIS---LTLNFSAYISEIIRSSIISIPKGQ 121 P LVQLF+I++G+P H+G+ + ++ TL+ +AY +EI+RSSI ++ G+ Sbjct: 59 PFLVQLFLIYFGVPEIMSHMGLNMKNVPGLVFVYAVFTLHIAAYSAEIMRSSIDAVAPGE 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++G+T Q+ IILPQ T S PL++ I +LK T++ + + ++ + A + Sbjct: 119 KEAAKSLGMTEFQSYVRIILPQAFTMSIPPLTNLVIGMLKGTALIFNVGVVDMMRKADLM 178 Query: 182 VSTTYQPLIIYCELA 196 + + L ++ + A Sbjct: 179 GGNSQRYLELFVDAA 193 >gi|226322422|ref|ZP_03797940.1| hypothetical protein COPCOM_00193 [Coprococcus comes ATCC 27758] gi|225209144|gb|EEG91498.1| hypothetical protein COPCOM_00193 [Coprococcus comes ATCC 27758] Length = 214 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 103/189 (54%), Gaps = 4/189 (2%) Query: 33 VISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVF 88 V+ + IGF I + + + I I Y+WI R TPL+VQ ++ +P + G+ Sbjct: 25 VVGITIGFLIGSLCGYLLQSKYKIGKAIAEVYIWIIRATPLMVQALYGYFVIPKLLGVDI 84 Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 S I + LN A+ISEI++ +++SI GQ +A ++GLT QT+ H+++P + Sbjct: 85 GSTAVGIGVIALNSGAFISEIVKGALMSIDPGQKEAGASLGLTSAQTMIHLVIPPAFKAA 144 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 L ++FI +K T++ S I + EI AQ + +++ + Y LA YL++ S I Sbjct: 145 LPALFNQFIISVKDTALLSAIAVNEITHQAQAYAALSFKAIPTYTALAAFYLVILSVLII 204 Query: 209 IQIKIESSV 217 +Q +IE + Sbjct: 205 VQKQIERKM 213 >gi|256965481|ref|ZP_05569652.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis HIP11704] gi|257415732|ref|ZP_05592726.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis AR01/DG] gi|307273809|ref|ZP_07555031.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|256955977|gb|EEU72609.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis HIP11704] gi|257157560|gb|EEU87520.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis ARO1/DG] gi|306509494|gb|EFM78542.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|315174637|gb|EFU18654.1| ABC transporter, permease protein [Enterococcus faecalis TX1346] Length = 237 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 10/225 (4%) Query: 3 YEWFNLIIDS--FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 Y W L D F Q I+++L ++F + + G A ++ I Sbjct: 18 YRWEALFQDWRIFGQAFLYTILLSLGAILVAFALGIFFGSLSAT-----KSKLLHAISRV 72 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNF--SAYISEIIRSSIISIP 118 YV F+ TPLL+Q V++YG P + + + I L + F AYISE++RS I ++P Sbjct: 73 YVEFFQNTPLLIQFIVVYYGFPLLSPLLSFSITTIAILCVGFYHGAYISEVVRSGIGAVP 132 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ++A+Y+ GLT QT+R++ILPQ PL+++ ++++K+TS + I+ ++ A Sbjct: 133 RGQFEAAYSQGLTYGQTMRYVILPQAWRIMLPPLTNQVVNLIKNTSTVAIISGADVMFAA 192 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 S + + F+Y IL + K+E + YS Sbjct: 193 NSWSSVNLNYIPAFALAGFLYFILCFPLANLARKMEEK-NKKAYS 236 >gi|225860689|ref|YP_002742198.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae Taiwan19F-14] gi|298229177|ref|ZP_06962858.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255599|ref|ZP_06979185.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502497|ref|YP_003724437.1| amino acid ABC superfamily transporter permease [Streptococcus pneumoniae TCH8431/19A] gi|225726493|gb|ACO22344.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae Taiwan19F-14] gi|298238092|gb|ADI69223.1| amino acid ABC superfamily ATP binding cassette transporter permease [Streptococcus pneumoniae TCH8431/19A] gi|327390246|gb|EGE88588.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA04375] Length = 226 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 105/194 (54%), Gaps = 1/194 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A +TL IA + S ++G +++IR + +++ + Y+ + R T Sbjct: 5 IVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIR-HYRIPVLAQVATAYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IGIV S V + L +Y++E RS + +I + Q + AI Sbjct: 64 PLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q R+++LPQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANIIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183 Query: 189 LIIYCELAFVYLIL 202 I L YLI+ Sbjct: 184 DIALAMLVVAYLIM 197 >gi|218458510|ref|ZP_03498601.1| amino acid ABC transporter permease [Rhizobium etli Kim 5] Length = 229 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 112/204 (54%), Gaps = 22/204 (10%) Query: 33 VISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYG----LPHIG 85 VIS+ GF IA+ F + L+ Y FRGTPLL+QL++++YG LP + Sbjct: 25 VISVTFGFIIAIGLAFAQVSGGRLTRLLARGYCTFFRGTPLLIQLWLLYYGVGSLLPMVP 84 Query: 86 ---------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 I+ + F +S TLN++AY +E++R +++++PKG+ +A A GL+ + Sbjct: 85 GIRQSLFWPILREGFFFAAVSFTLNYAAYEAEVLRGALLAVPKGELEAGRAFGLSPWKLT 144 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPLIIYC 193 R I LP+ I + ++ E + LK+T +A T+T+ +++ A ++ T Y+PL++ Sbjct: 145 RRIWLPRAIRIALPTIAGEIVMQLKATPLAFTVTVMDLYAVANKVRQDTLLVYEPLLV-- 202 Query: 194 ELAFVYLILTSFCYIIQIKIESSV 217 + YL LT+ + +E+ V Sbjct: 203 -VTLFYLALTAVIARVFRGLEAQV 225 >gi|56962686|ref|YP_174412.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16] gi|56908924|dbj|BAD63451.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16] Length = 226 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 112/207 (54%), Gaps = 14/207 (6%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M W + I FP++L +AI VT+ I++ ISL G + ++R S ++L + Sbjct: 1 MNKTWDWEFAIAIFPEIL-SAITVTIAATIIAYCISLTAGLVLTLLR-RASFKPLALTVA 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 + R TP LVQLF ++Y P G F I L L+++ Y+SEI RS I ++PK Sbjct: 59 GMIEFIRATPPLVQLFFVYYTTPLTG-----FQTGAIVLGLHYATYVSEIYRSGIEAVPK 113 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 QW+AS A+ TR QT R IILPQ I L + I + K T + S I + E+ AQ Sbjct: 114 SQWEASQALNFTRAQTWRRIILPQAIPPVIPMLGNYLIVLFKETPLLSAIFVVEMMAVAQ 173 Query: 180 RIVSTTY---QPLIIYCELAFVYLILT 203 I ++ + +P+ I + F++L+L+ Sbjct: 174 SIGTSDWRYVEPITI---VGFLFLVLS 197 >gi|309807768|ref|ZP_07701702.1| ABC transporter, permease protein [Lactobacillus iners LactinV 01V1-a] gi|308169028|gb|EFO71112.1| ABC transporter, permease protein [Lactobacillus iners LactinV 01V1-a] Length = 179 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 50/141 (35%), Positives = 88/141 (62%), Gaps = 3/141 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + RGTP +VQ+ +++G+ I + +A II++ LN AY++E IRS I S+P G Sbjct: 19 YIELIRGTPQMVQILFVYFGIGAIIQNMSALLAGIIAIGLNSGAYVAEDIRSGINSLPVG 78 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++GL++ T R++++PQ I L +EFI++LK +S+ S I + E Q Sbjct: 79 QAEAARSLGLSKAATYRYVVIPQAIKNIWPALGNEFITLLKDSSLVSIIGVAETMYQTQL 138 Query: 181 IVSTTYQ---PLIIYCELAFV 198 + ++TYQ PL++ + F+ Sbjct: 139 VQTSTYQGVFPLVVAMAIYFI 159 >gi|308185787|ref|YP_003929918.1| ABC transport system, permease protein [Pantoea vagans C9-1] gi|308056297|gb|ADO08469.1| putative ABC transport system, permease protein [Pantoea vagans C9-1] Length = 222 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 104/191 (54%), Gaps = 2/191 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 +P+LL + + VT+ + ++ + +G A +R + +S + YV + R TP +V Sbjct: 14 WPELL-SGLWVTIQLTVLATTGGVALGIAGAALR-SGKPSWMSRLWGIYVELIRNTPFVV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I +GLP +G+ + A ++++ +N AY +EIIR+ I PKGQW+A +GLTR Sbjct: 72 QLFFIVFGLPALGLKLTAGEAALLAMLINLGAYSTEIIRAGIQVTPKGQWEAGRVLGLTR 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT ++LP + L S+ I ++ +SV S ++ E+ A I S T+ +Y Sbjct: 132 SQTFLRVVLPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFAANLIQSRTFLSFEVY 191 Query: 193 CELAFVYLILT 203 +YL L+ Sbjct: 192 LVTTLIYLALS 202 >gi|83746552|ref|ZP_00943603.1| GlnP [Ralstonia solanacearum UW551] gi|207743862|ref|YP_002260254.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] gi|83726883|gb|EAP74010.1| GlnP [Ralstonia solanacearum UW551] gi|206595262|emb|CAQ62189.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] Length = 231 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 65/226 (28%), Positives = 124/226 (54%), Gaps = 15/226 (6%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ + Q L + +++ ++ ++FV++L +G +A++R+ S + + I +V R Sbjct: 9 LLSGQYHQWLVSGFFLSIKLSVLAFVLALPLGIVVALLRMAPSAPLRA-IGQAFVEAIRN 67 Query: 68 TPLLVQLFVIFYGLPHI------GIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLL + ++G P + ++D + +I+L L +AY++E IRS + SIP Sbjct: 68 VPLLAHMLFWYFGAPQLLPNAVRTWLYDLNYEAASAVIALVLYTAAYMAEDIRSGLRSIP 127 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 K Q +AS A+GL+ Q +R +ILPQ++ + PL S+ +++ K++S+A I + E+ A Sbjct: 128 KEQLEASRALGLSFLQAMRRVILPQSLRVTVPPLVSQTLNLWKNSSIAMVIGVAELMYEA 187 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 Q++ S T++ + YL ++ I I + S+ QH Y V Sbjct: 188 QQVESATFRGFEAFAFATAAYLTIS-----IAITVFSAWYQHRYPV 228 >gi|107029119|ref|YP_626214.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116686987|ref|YP_840234.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|105898283|gb|ABF81241.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia cenocepacia AU 1054] gi|116652702|gb|ABK13341.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia cenocepacia HI2424] Length = 222 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 106/198 (53%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F I++ +P LL A ++L IA ++FV ++IG A I + + + ++ YV Sbjct: 5 FAPILEQWPYLL-AGAWLSLQIAMLAFVFGMLIGVVCASI-LHYGPASLRRVVAAYVMFA 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 TP LVQ+F +F+ LP +G+ F A++I T N AY+ EI R+ S+ + + +A+ Sbjct: 63 TNTPQLVQIFFLFFALPEVGVTLSPFSAVLIGATFNAGAYLCEIQRAGFASVRRAEIEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +G + Q +R++I P + PLS++FI + TS+AS + E+ + S T Sbjct: 123 EVLGFSTAQIVRYVIFPHVLKVMFPPLSNQFIMMTLGTSMASVFGVEELTGRTFNLSSQT 182 Query: 186 YQPLIIYCELAFVYLILT 203 Y + + A +Y+ +T Sbjct: 183 YLSIEAFSVAAVMYIAIT 200 >gi|169835617|ref|ZP_02868805.1| Amino acid transport system permease protein [candidate division TM7 single-cell isolate TM7a] Length = 194 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/167 (37%), Positives = 90/167 (53%), Gaps = 14/167 (8%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDS-------FVAIIISLTLNFSAYISEIIRSS 113 YV I RGTPLLVQL +++Y +VF S FVA I + +N AYI EIIR Sbjct: 33 YVDIIRGTPLLVQLLIMYY------VVFGSYNFMPKIFVAAI-AFGINAGAYIGEIIRGG 85 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SI GQ +A+ ++GL+ Q +R +ILPQ + S L SEFI++LK TS+ I + + Sbjct: 86 IESIDNGQMEAARSLGLSSWQAMRLVILPQALKNSLPSLISEFIALLKETSIVGWIGLND 145 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I + A I T A +YL LT+ + ++E + + Sbjct: 146 IMRGADNIRFQTATAFESLFAAALIYLALTAIFTRVATRVERKLKED 192 >gi|310819142|ref|YP_003951500.1| glutamine ABC transporter substrate-binding protein [Stigmatella aurantiaca DW4/3-1] gi|309392214|gb|ADO69673.1| Glutamine ABC transporter substrate-binding protein [Stigmatella aurantiaca DW4/3-1] Length = 469 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 121/212 (57%), Gaps = 8/212 (3%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + P++L + VTL + + + + G +A+ RI + L + Y+ +FRGTPLL Sbjct: 261 ALPRVLQG-LGVTLQLTLGAGGLGIAWGMLVALARISRRTGLRGLAVA-YITLFRGTPLL 318 Query: 72 VQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 +QL IF+ LP + GI A +I+L+LN +AYI+EI R++I SI KGQ +A+ A+G+ Sbjct: 319 LQLLFIFFALPIVAGIRMGPMAAGVIALSLNAAAYIAEIFRAAIESIDKGQMEAARALGM 378 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + + +R +ILPQT PL +E ++ K TS+ I +PE+ +++ T +P Sbjct: 379 SHELAMRRVILPQTFRRLIPPLVNELAALSKDTSLVMVIALPEMLYETKQLAGTYLRPE- 437 Query: 191 IYCELAFVYLI----LTSFCYIIQIKIESSVT 218 +Y A YL+ L++ ++ ++E+ T Sbjct: 438 VYAWAAIGYLLIVAALSALAQRLERRLEARGT 469 >gi|165976777|ref|YP_001652370.1| arginine transporter permease subunit ArtQ [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|307257419|ref|ZP_07539188.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|165876878|gb|ABY69926.1| arginine transport system permease protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|306864071|gb|EFM95985.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 223 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 114/211 (54%), Gaps = 8/211 (3%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L+Y+A ++TL +A S ++ L++ V+ IS ++ + RG P ++ + Sbjct: 8 LIYSATLMTLGLALTSLIVGLLLSMLFVVLETS-KQPCISKPTSVFLALLRGLPEILVVL 66 Query: 76 VIFYGLPHI-----G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +IF+G + G + F +F +++L+L FSAY S+ +R +I ++P GQW++ A+ Sbjct: 67 LIFFGSTELVEKITGEYVEFSAFSCGVLALSLIFSAYASQSLRGAIQAVPNGQWESGAAL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+R T II+PQ + LS++++ +LK T++ S I + ++ + I + +QP Sbjct: 127 GLSRAHTFLRIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLMRQTDLINTNEHQP 186 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 Y A +YL +T +I +E T+ Sbjct: 187 FTWYGLAALIYLAITLISQVIIAGLEKRFTR 217 >gi|157165564|ref|YP_001467259.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Campylobacter concisus 13826] gi|112801999|gb|EAT99343.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter concisus 13826] Length = 236 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 110/199 (55%), Gaps = 6/199 (3%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VTL + I + +GF +A I+ F +++ ++ Y+ I RGTP+++QL + + + Sbjct: 42 VTLGLTIGGIAIGITLGFILAFIK-FLDIKVLNFVIDEYIDILRGTPVILQLLI--FSVV 98 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 D+F +I+L LN SAY++EI+RS I S+ KGQ +A+ A+GL ++R I+ P Sbjct: 99 IFATWSDNFYVAVIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGLNYYVSMREIVFP 158 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL-IIYCELAFVYLI 201 Q L++EFIS+ K TSV I++ +I ++ + + Y P +I+ VY + Sbjct: 159 QATKNILPALANEFISLFKETSVVGYISVVDITMQSKSLQAVFYSPEPVIFT--GIVYYV 216 Query: 202 LTSFCYIIQIKIESSVTQH 220 F ++ +E + +H Sbjct: 217 SVKFFTLLVKLLERRLNRH 235 >gi|320329011|gb|EFW85010.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330880665|gb|EGH14814.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 220 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 96/162 (59%), Gaps = 3/162 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + ++ YV + R TP+LV + +I++ LP +GI D + I++L+L AY++E+ R+ Sbjct: 53 LRIVASIYVTVVRNTPILVLILLIYFALPGLGIRLDKLASFIVTLSLYAGAYLTEVFRAG 112 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++SI +GQ +A AIGL Q +II+P + LS+ FIS+ K TS+A+ I +PE Sbjct: 113 LLSIHEGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPE 172 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + A++I +Y+ + + +Y++ CY+I + + + Sbjct: 173 LTYYARKINVESYRVIETWLVTTALYVVA---CYVIAMLLRT 211 >gi|118467773|ref|YP_890806.1| amino acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine [Mycobacterium smegmatis str. MC2 155] gi|118169060|gb|ABK69956.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Mycobacterium smegmatis str. MC2 155] Length = 297 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 19/166 (11%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF----------VIFYGLPHIGIV 87 IG IA++R ++ + Y+W+FRG P+L+Q+ VI LP G + Sbjct: 75 IGVGIALLR-RSANPVARWFAAAYIWLFRGLPVLLQILIWYNLALVIPVISIPLPMGGYL 133 Query: 88 FD--------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 +F A ++ L LN SAY++EI+R+ + S+ GQ +A+ +IG+T QT+R I Sbjct: 134 LQEPTNALVSAFTAALLGLALNESAYMAEIVRAGLNSVDSGQVEAAKSIGMTPAQTLRRI 193 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +LPQ + P ++FI +LK TS+AS I + E+ A I S Sbjct: 194 VLPQAMRVIIPPTGNDFIDMLKGTSIASVIGVTELLHAANNISSNN 239 >gi|116512666|ref|YP_811573.1| glutamate ABC transporter permease protein [Lactococcus lactis subsp. cremoris SK11] gi|116108320|gb|ABJ73460.1| amino acid ABC transporter membrane protein, PAAT family [Lactococcus lactis subsp. cremoris SK11] Length = 228 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/194 (31%), Positives = 112/194 (57%), Gaps = 11/194 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++VT+ I+ +I ++G A+ +I D + + + Y+ IFRGTP+LVQ+ + F Sbjct: 16 GMIVTIFISAFVVLIGTLLGIVTALAKISKIDPL-RWLANIYIEIFRGTPMLVQIMLGFG 74 Query: 80 -----GLP--HIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LP +GI+ + II ++LN AY++EI+R+ I ++P GQ +A+Y++G Sbjct: 75 LMGSISLPTFQVGILQQDLGRLIPGIILISLNSGAYMAEIVRAGIEAVPLGQKEAAYSLG 134 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 + +Q + +ILPQ + + +EF++I+K +S+ TI + E+F AQ + + TYQ + Sbjct: 135 IRPRQAMTTVILPQALRNILPAVGNEFVTIIKDSSLLYTIGVMEVFNGAQTVANLTYQTI 194 Query: 190 IIYCELAFVYLILT 203 +A Y ++T Sbjct: 195 SPMIFVALYYFVVT 208 >gi|255318802|ref|ZP_05360028.1| polar amino acid ABC transporter, inner membrane subunit [Acinetobacter radioresistens SK82] gi|255304058|gb|EET83249.1| polar amino acid ABC transporter, inner membrane subunit [Acinetobacter radioresistens SK82] Length = 247 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 112/198 (56%), Gaps = 15/198 (7%) Query: 25 LPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI 84 L IA +++ I++++G + ++R S T + I YV +FR PLL+QLF+ FY +P+ Sbjct: 33 LVIALVAWSIAMVLGSILGIMRTLPSKTART-IGTAYVTLFRNVPLLIQLFIWFYVVPNF 91 Query: 85 --GIVFD-----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 G V D + ++ + L L +A + E +R+ I ++P+GQ +A YA+G + Sbjct: 92 LPGPVKDWWMNDLSSNASALISASVGLGLFTAARVCEQVRTGIEALPRGQINAGYAMGFS 151 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 Q R++ILPQ+ T PLSSE + +K+TSVAS + + EI + I T + I Sbjct: 152 TSQLYRYVILPQSFRTILPPLSSELTNCVKNTSVASLVGVAEIISQMKTISEYTQNTIEI 211 Query: 192 YCELAFVYLILTSFCYII 209 Y + +++++ + C I+ Sbjct: 212 YTFVTLIFIVI-NVCLIL 228 >gi|148997217|ref|ZP_01824871.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] gi|168486795|ref|ZP_02711303.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC1087-00] gi|168575369|ref|ZP_02721305.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae MLV-016] gi|307067317|ref|YP_003876283.1| amino acid ABC transporter permease [Streptococcus pneumoniae AP200] gi|147756917|gb|EDK63957.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] gi|183570244|gb|EDT90772.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC1087-00] gi|183578523|gb|EDT99051.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae MLV-016] gi|306408854|gb|ADM84281.1| ABC-type amino acid transport system, permease component [Streptococcus pneumoniae AP200] Length = 226 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 105/194 (54%), Gaps = 1/194 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A +TL IA + S ++G +++IR + +++ + Y+ + R T Sbjct: 5 IVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIR-HYRIPVLAQVATAYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IGIV S V + L +Y++E RS + +I + Q + AI Sbjct: 64 PLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q R+++LPQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183 Query: 189 LIIYCELAFVYLIL 202 I L YLI+ Sbjct: 184 DIALAMLVVAYLIM 197 >gi|170722936|ref|YP_001750624.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169760939|gb|ACA74255.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 232 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 112/208 (53%), Gaps = 13/208 (6%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N+I ++ P L + +A IS L++ + ++R+ +++L Y ++ Sbjct: 5 YNVIWEAMPLYLGGLLTTLKLLA-ISLFFGLLVAVPLGLMRVS-KQPVVNLTAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSII 115 RGTP+LVQLF+I+YGL V +S F A + + +N SAY +EII S+ Sbjct: 63 RGTPMLVQLFLIYYGLAQFEAVRESIFWPLLSSATFCACL-AFAVNTSAYTAEIIAGSLK 121 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 + P G+ +A+ A+G++R + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 122 ATPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDIT 181 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + Y P Y YL LT Sbjct: 182 GAARTVNAQYYLPFEAYITAGVFYLCLT 209 >gi|332704740|ref|ZP_08424828.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio africanus str. Walvis Bay] gi|332554889|gb|EGJ51933.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio africanus str. Walvis Bay] Length = 222 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 103/178 (57%), Gaps = 6/178 (3%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 II +F + L ++++ +P A + V+ ++ G A F ++S + +Y +FRGT Sbjct: 11 IIPAFNRGLGNSMLLIVPSAIMGVVLGILAGTARA-----FGGPVLSRLAAWYAALFRGT 65 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PL+ QLF+ ++GLP++GI ++ A +I + AY SE IR ++SI +GQ A+ ++ Sbjct: 66 PLVAQLFIWYFGLPNLGIYLSAYWASVIGFGMCSGAYHSEYIRGGLLSIRRGQLLAAQSL 125 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 G + T+R II+PQ + +E I ++K +S+A IT E+ A +I++T Y Sbjct: 126 GFSTASTLRSIIIPQAFRRALPGCGNEIIYLIKYSSLAYIITFIELTGEA-KILATRY 182 >gi|325661856|ref|ZP_08150477.1| hypothetical protein HMPREF0490_01215 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471834|gb|EGC75051.1| hypothetical protein HMPREF0490_01215 [Lachnospiraceae bacterium 4_1_37FAA] Length = 215 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 104/172 (60%), Gaps = 10/172 (5%) Query: 29 CISFVISLIIGFFIAVIRIFFSD----TIISLIMHFYVWIFRGTPLLVQLFVIF---YGL 81 C+ FV++LI + ++ ++F +IS I+ Y+ + RGTPL++QL V + Y L Sbjct: 18 CLIFVMTLIFSLPLGLL-VYFGRVSRIKLISWIVKIYISVMRGTPLMLQLLVWYFAPYYL 76 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + I AI++ +LN++AY +EI RS I SIPKGQ++A+ +G +++QT I+L Sbjct: 77 WQMNIGGYKLTAILLGCSLNYAAYFAEIYRSGIESIPKGQYEAAALLGYSKQQTFLRIVL 136 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTYQPLII 191 PQ + +++E I+++K TS+ +++ E+F A++I + TT P I Sbjct: 137 PQMVKNVLPSVTNEVITLVKDTSLVYSLSYIEMFAVAKQIAAAQTTVVPFFI 188 >gi|309378707|emb|CBX22657.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 248 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 75/248 (30%), Positives = 126/248 (50%), Gaps = 38/248 (15%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----------IS 55 F++I + LY A+ TL + ++ ++G F+A+ R+ + + Sbjct: 5 FDIIYEYRWMFLYGALT-TLGLTVVATAGGSVLGLFLALARLIHLEKAGAPMRALAWALR 63 Query: 56 LIMHFYVWIFRGTPLLVQLFVI------FYGLPHIGIV------------FDSFVAIIIS 97 + YV +FRGTPL VQ+ + F+ P GI+ + +A ++ Sbjct: 64 KVSLLYVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILVSGEAAIALRRGYGPLIAGSLA 123 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 L N AYI EI R+ I SI KGQ +A+ ++GLT Q +R++ILPQ + PL+SEFI Sbjct: 124 LIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQAMRYVILPQALRRMLPPLASEFI 183 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE----LAFVYLILTSFCYIIQIKI 213 ++LK +S+ S I + E+ Q ++ Y +Y E +A +YL++T+F I +++ Sbjct: 184 TLLKDSSLLSVIAVAEL-AYVQNTITGRYS---VYEEPLYTVALIYLLMTTFLGWIFLRL 239 Query: 214 ESSVT-QH 220 E QH Sbjct: 240 EKRYNPQH 247 >gi|91778290|ref|YP_553498.1| ABC amino acid transporter, inner membrane subunit [Burkholderia xenovorans LB400] gi|296160736|ref|ZP_06843550.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|91690950|gb|ABE34148.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia xenovorans LB400] gi|295889039|gb|EFG68843.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 216 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 120/215 (55%), Gaps = 9/215 (4%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFR 66 + FP LL+AA+ T+ I+ + L+IGFF+A+ + + YV+ FR Sbjct: 8 LQGFPLLLHAALA-TIGIS----LTGLLIGFFVAIGVCAARLSPNRAARMFGGAYVFFFR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G P+LVQL +++Y LP GI VA I +++L ++YI+EI+R +SIP G +A+ Sbjct: 63 GVPMLVQLLLVYYLLPFAGINVSPVVAAISTVSLCSASYIAEILRGGFLSIPPGHLEAAR 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +GL+ +R I++PQ + L +E + ++K++S+ S + + E+ +TAQ I ++TY Sbjct: 123 MLGLSPFDMLRRILVPQAFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNIAASTY 182 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 +PL Y +Y ++ ++ E + QH Sbjct: 183 RPLEAYLAAGLIYFVICGALTLVAHAAEYRL-QHA 216 >gi|323490820|ref|ZP_08096021.1| polar amino acid ABC transporter, inner membrane subunit [Planococcus donghaensis MPA1U2] gi|323395532|gb|EGA88377.1| polar amino acid ABC transporter, inner membrane subunit [Planococcus donghaensis MPA1U2] Length = 219 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 65/211 (30%), Positives = 114/211 (54%), Gaps = 22/211 (10%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTIISLIMHFYVWIFRGTPLLV 72 I TL + ++ I+G +A+ +I +F+D Y IFRGTPL++ Sbjct: 18 GIWATLKFVFFAIILGSILGTLLALFKIGSIKPLRWFADA--------YTSIFRGTPLIL 69 Query: 73 QLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 QL +I++ P + G +F++ I++ LN SAYISEIIR+ I ++ KGQ +A+ A+G+ Sbjct: 70 QLMIIYFSTPQLTGYDISAFLSAILAFGLNSSAYISEIIRAGIQAVDKGQMEAAQALGVP 129 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST---TYQP 188 + ++ IILPQ + L +EFI++ K +++ STI ++ + AQ + + ++P Sbjct: 130 YRAMMKDIILPQALKNILPALMNEFITLTKESAIVSTIGYLDLMRRAQVVGADLFRNFEP 189 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 L+ + F+Y L +I E + Q Sbjct: 190 LLF---VGFIYWCLVMGLTMIGRVFERRLKQ 217 >gi|332160645|ref|YP_004297222.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604515|emb|CBY26013.1| amino acid ABC transporter, permease protein [Yersinia enterocolitica subsp. palearctica Y11] gi|325664875|gb|ADZ41519.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 227 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 101/178 (56%), Gaps = 5/178 (2%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH----FYVWIFRGT 68 P+LL + +++T+ + I+ + + +G A IR + + +I+ YV I R T Sbjct: 14 LPELL-SGLLITIELTAIATLGGIALGIVGAAIRCSHTSRLDKVILRRVWGGYVEIVRNT 72 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P +VQLF I +GLP +G+ + A ++++T+N AY +EIIR+ I + KGQW+A + Sbjct: 73 PFVVQLFFIVFGLPALGLKLSAGQAAVLAMTINLGAYSTEIIRAGIQASAKGQWEAGRVL 132 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 GL+R QT +ILP ++ L S+ I ++ ++V S ++ E+ A I S T+ Sbjct: 133 GLSRSQTFFRVILPPSLQRIYPALVSQCIIVMLGSAVVSQVSFEELTFAANLIQSRTF 190 >gi|307708869|ref|ZP_07645329.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK564] gi|307620205|gb|EFN99321.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK564] Length = 226 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 106/194 (54%), Gaps = 1/194 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A ++TL IA + S ++G +++IR + +++ + Y+ + R T Sbjct: 5 IVEQYLPLYQKAFLLTLHIAVWGILGSFLLGLIVSIIR-HYQIPVLAQVATAYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP +GIV S V + L +Y++E RS + ++ + Q + AI Sbjct: 64 PLLIQLFFLYFGLPRVGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAVSQTQQEIGLAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q R+++LPQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 124 GLTPIQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183 Query: 189 LIIYCELAFVYLIL 202 I L YLI+ Sbjct: 184 DIALAMLVVAYLIM 197 >gi|256370356|ref|YP_003107867.1| amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|256000519|gb|ACU48918.1| amino acid ABC transporter, permease protein [Brucella microti CCM 4915] Length = 240 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 55/151 (36%), Positives = 90/151 (59%), Gaps = 1/151 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV FR P +V L++ FYGLP +G+ + I+L S+Y +EIIR +I+++PKG Sbjct: 58 YVEWFRNIPFIVVLYLFFYGLPFMGVRLPESIVGTIALAFFASSYFAEIIRGAILAVPKG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ AIG++ Q + I+ PQT+ P ++ IS++K TSV STIT+ E+ Sbjct: 118 QMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETSVLSTITVAELTYQGLV 177 Query: 181 IVSTTYQPLIIYCELAFVYLILTS-FCYIIQ 210 + T+ P I+ A +Y ++T+ F Y++ Sbjct: 178 MQGETFAPFEIFLTTAAIYWMITAIFAYLMH 208 >gi|332528309|ref|ZP_08404309.1| polar amino acid ABC transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] gi|332042180|gb|EGI78506.1| polar amino acid ABC transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] Length = 224 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 47/138 (34%), Positives = 81/138 (58%), Gaps = 1/138 (0%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FR P LV L +++GLP +G A+++ LN +AY +E+ R+ + ++P GQ +A Sbjct: 69 FRAFPPLVLLVFVYFGLPFLGWEIPKLGAVLLGFLLNNAAYYAEVFRAGLEAVPSGQMEA 128 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + + GLTR Q +RH+++PQ + L S I ++K T++AS + +PE+ + A+ S Sbjct: 129 ARSTGLTRMQALRHVVVPQAVKNVLPDLVSNSIEVVKLTTIASVVGLPELLRAARDAQSL 188 Query: 185 TYQPLIIYCELAFVYLIL 202 Y P + A +YL+L Sbjct: 189 VYNPSPVVLA-ALMYLVL 205 >gi|257463486|ref|ZP_05627880.1| amino acid ABC transporter permease [Fusobacterium sp. D12] gi|317061044|ref|ZP_07925529.1| amino acid ABC transporter permease [Fusobacterium sp. D12] gi|313686720|gb|EFS23555.1| amino acid ABC transporter permease [Fusobacterium sp. D12] Length = 225 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/166 (36%), Positives = 98/166 (59%), Gaps = 3/166 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII--ISLTLNFSAYISEIIR 111 +S I Y+ I RGTP +VQL +I + +G + ++ + ++ I+ +N AY++EIIR Sbjct: 57 LSQIALLYIDIVRGTPAVVQL-MILANIVFVGALRETPILLVAGIAFGMNSGAYVAEIIR 115 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + I + KGQ +A A+GL+ QT++ II+PQ I L SEFI++LK TS+ I Sbjct: 116 AGIEGLEKGQTEAGRALGLSYAQTMKFIIIPQAIKKILPALVSEFITLLKETSIVGFIGG 175 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 ++ ++A I S TY+ + + +YLILTS I+ K+E + Sbjct: 176 VDLLRSANIITSQTYRGVEPLLAVGIIYLILTSIFTILMRKVEKGL 221 >gi|222106141|ref|YP_002546932.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] gi|221737320|gb|ACM38216.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] Length = 229 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 104/178 (58%), Gaps = 19/178 (10%) Query: 33 VISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYG----LPHI- 84 VIS+++GF +A+ F + ++ Y FRGTPLL+QL++++YG LP I Sbjct: 25 VISVVLGFVMAIGLAFAQVSGGPVTRVLARGYSTFFRGTPLLIQLWLLYYGVGSLLPMIP 84 Query: 85 GI--------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 GI + + F +S TLN++AY +E++R +++++PKG+ +A A G+ R I Sbjct: 85 GIRQSLIWPLLREGFFFAAVSFTLNYAAYEAEVLRGALLAVPKGELEAGRAFGMGRFTLI 144 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPLII 191 R + LP+ I + ++ E + LK+T +A T+T+ +++ A ++ T Y+PLI+ Sbjct: 145 RRVWLPRAIRIALPTIAGEVVMQLKATPLAFTVTVMDLYAVAYKVRQDTLLVYEPLIV 202 >gi|307702258|ref|ZP_07639218.1| amino ABC transporter, permease protein His/Glu/Gln/Arg/opine family [Streptococcus oralis ATCC 35037] gi|307624271|gb|EFO03248.1| amino ABC transporter, permease protein His/Glu/Gln/Arg/opine family [Streptococcus oralis ATCC 35037] Length = 226 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/194 (31%), Positives = 103/194 (53%), Gaps = 1/194 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A +TL IA + S ++G ++VIR + I S + Y+ + R T Sbjct: 5 IVEQYLPLYQKAFFLTLHIAVWGILGSFLVGLIVSVIR-HYRVPIFSQLATAYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IGIV S V + L +Y++E RS + ++ + Q + AI Sbjct: 64 PLLIQLFFLYFGLPRIGIVLSSEVCATVGLIFLGGSYMAESFRSGLEAVSQTQHEIGLAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q R+++ PQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 124 GLTSVQVFRYVVFPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183 Query: 189 LIIYCELAFVYLIL 202 I L YLI+ Sbjct: 184 DIALAMLVVAYLIM 197 >gi|256762126|ref|ZP_05502706.1| amino acid ABC transporter, permease [Enterococcus faecalis T3] gi|256683377|gb|EEU23072.1| amino acid ABC transporter, permease [Enterococcus faecalis T3] Length = 235 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 10/225 (4%) Query: 3 YEWFNLIIDS--FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 Y W L D F Q I+++L ++F + + G A ++ I Sbjct: 16 YRWEALFQDWRIFGQAFLYTILLSLGAILVAFALGIFFGSLSAT-----KSKLLHAISRV 70 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNF--SAYISEIIRSSIISIP 118 YV F+ TPLL+Q V++YG P + + + I L + F AYISE++RS I ++P Sbjct: 71 YVEFFQNTPLLIQFIVVYYGFPLLSPLLSFSITTIAILCVGFYHGAYISEVVRSGIGAVP 130 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ++A+Y+ GLT QT+R++ILPQ PL+++ ++++K+TS + I+ ++ A Sbjct: 131 RGQFEAAYSQGLTYGQTMRYVILPQAWRIMLPPLTNQVVNLIKNTSTVAIISGADVMFAA 190 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 S + + F+Y IL + K+E + YS Sbjct: 191 NSWSSVNLNYIPAFALAGFLYFILCFPLANLARKMEEK-NKKAYS 234 >gi|117164571|emb|CAJ88117.1| putative ABC transporter permease [Streptomyces ambofaciens ATCC 23877] Length = 334 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 115/202 (56%), Gaps = 25/202 (12%) Query: 32 FVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF-----YGLPHIGI 86 V+ ++G +AV+R+ + ++ + YVWIFR TPLLVQL F Y +GI Sbjct: 89 MVLGFLLGTVLAVMRLS-GNPVLRTLSWGYVWIFRSTPLLVQLLFWFNIGALYPTLGLGI 147 Query: 87 VFD-SFVAI------------IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 F FV++ +I LTL+ +AY +E++R I+S+ GQ +A+ A+GL+R+ Sbjct: 148 PFGPEFVSVKTVNLLGPTLTAVIGLTLHETAYAAEVVRGGILSVDPGQTEAAQALGLSRR 207 Query: 134 QTIRHIILPQTITTSAVPLSSE-FISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLI 190 +T+R +++PQ + S VP + I LK TS+ S + + ++ + Q I + TYQ PL+ Sbjct: 208 RTLRRVVIPQAM-RSIVPTAGNMLIGTLKGTSIVSVLAVHDLLYSVQLIYNQTYQVIPLL 266 Query: 191 IYCELAFVYL--ILTSFCYIIQ 210 + L ++ + +L++ Y ++ Sbjct: 267 MVATLWYIAVTSVLSAGQYYVE 288 >gi|330830031|ref|YP_004392983.1| amino acid ABC transporter permease [Aeromonas veronii B565] gi|328805167|gb|AEB50366.1| ABC-type amino acid transporter, permease protein [Aeromonas veronii B565] Length = 265 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 111/184 (60%), Gaps = 6/184 (3%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EW + P L ++VTL +A +S + ++ +G + +R+ S L + Y+ Sbjct: 49 EWDEGTFYAGP--LLNGLLVTLQVALLSLLGTMAVGVCVVSLRLLPSRLGPWLAIA-YLA 105 Query: 64 IFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + R TP LVQL+++++ L P +G+ ++SL+L A+ +E++R+ + +IPKGQW Sbjct: 106 LVRTTPQLVQLYILYFLLGPMLGLA--PLACAVLSLSLYQGAFTAEVLRAGVQAIPKGQW 163 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ ++GL+R T+R +ILPQ + + PL++E +S++K +++ S I I ++ + +V Sbjct: 164 EAAQSLGLSRAITLRKVILPQLVRITLPPLTNELVSLIKHSALVSVIAIFDLTNEGRTLV 223 Query: 183 STTY 186 + T+ Sbjct: 224 ADTF 227 >gi|307727081|ref|YP_003910294.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Burkholderia sp. CCGE1003] gi|307587606|gb|ADN61003.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Burkholderia sp. CCGE1003] Length = 219 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 65/211 (30%), Positives = 113/211 (53%), Gaps = 4/211 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 + FP LL +VT+ IA + V+++++ F +A + + + YV IFRGT L Sbjct: 3 ELFP-LLLQGTLVTVEIAAFATVLAIVMAF-VATAAKLAPWAPLRWLGNAYVEIFRGTSL 60 Query: 71 LVQLFVIFY--GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 LVQLF F+ LP I F I+ L L++ AY SEI+R ++ S+P GQ++A+ A+ Sbjct: 61 LVQLFWFFFVLPLPPFRIEMTPFTVAIVGLGLHYGAYGSEILRGALRSVPGGQFEAALAL 120 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 ++ +R I+LPQ + + P ++ I +LK TS+ S IT+ ++ A+++ T++ Sbjct: 121 NMSPLTRMRRIVLPQAMINALPPATNLMIELLKGTSLVSLITLSDLTFRARQLDEATFKT 180 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 I+ +Y +L + E V+ Sbjct: 181 AEIFMLTLVIYFVLAQILVALMRHFERRVSH 211 >gi|229089484|ref|ZP_04220754.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-42] gi|228693870|gb|EEL47563.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-42] Length = 196 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 89/143 (62%), Gaps = 1/143 (0%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEI 109 ++ +++ I H Y+ I RGTPL+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI Sbjct: 10 NNKVLNSIAHVYIAIIRGTPLIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEI 68 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R SI S+ +GQ +A+ ++G+ +R I+LPQ S PL ++FI LK +S+ + + Sbjct: 69 FRGSIQSVDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLGNQFIIGLKDSSLVAYV 128 Query: 170 TIPEIFQTAQRIVSTTYQPLIIY 192 + E++ + I + +Q L Y Sbjct: 129 GLSELWGSGLSIAAGNFQQLDTY 151 >gi|13475941|ref|NP_107511.1| amino acid ABC transporter protein, permease protein [Mesorhizobium loti MAFF303099] gi|14026701|dbj|BAB53297.1| amino acid ABC transporter protein, permease protein [Mesorhizobium loti MAFF303099] Length = 219 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 105/195 (53%), Gaps = 5/195 (2%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWIFRGT 68 + L+ +VT+ + + V+SLI+ F + R+ FF+ + + Y+ FRGT Sbjct: 5 SGYLGLILQGALVTIELTLMGSVLSLIMAFLAGMGRLSRFFA---LRALATAYIEFFRGT 61 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 + VQLF ++ LP IG+ A +++L LN AY +E++R ++ SI + Q +A A+ Sbjct: 62 SIFVQLFFAYFVLPLIGLELTPLQAGVLALGLNVGAYAAEVVRGAVQSIGREQHEACIAL 121 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 L R Q +RH+ILPQ + I +LK+TSV S I++ ++ AQ + + T Sbjct: 122 NLGRWQGLRHVILPQAFLVMLPTFGNNAIELLKATSVVSLISLADLTFQAQVVRAQTGNT 181 Query: 189 LIIYCELAFVYLILT 203 ++ + + +Y +L Sbjct: 182 MVPFATILVIYFVLA 196 >gi|293365031|ref|ZP_06611748.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] gi|291316481|gb|EFE56917.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] Length = 231 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/194 (31%), Positives = 103/194 (53%), Gaps = 1/194 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A +TL IA + S ++G ++VIR + I S + Y+ + R T Sbjct: 10 IVEQYLPLYQKAFFLTLHIAVWGILGSFLVGLIVSVIR-HYRVPIFSQLATAYIELSRNT 68 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IGIV S V + L +Y++E RS + ++ + Q + AI Sbjct: 69 PLLIQLFFLYFGLPRIGIVLSSEVCATVGLIFLGGSYMAESFRSGLEAVSQTQHEIGLAI 128 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q R+++ PQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 129 GLTSVQVFRYVVFPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 188 Query: 189 LIIYCELAFVYLIL 202 I L YLI+ Sbjct: 189 DIALAMLVVAYLIM 202 >gi|225374846|ref|ZP_03752067.1| hypothetical protein ROSEINA2194_00469 [Roseburia inulinivorans DSM 16841] gi|225213307|gb|EEG95661.1| hypothetical protein ROSEINA2194_00469 [Roseburia inulinivorans DSM 16841] Length = 216 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/202 (31%), Positives = 116/202 (57%), Gaps = 9/202 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + ++ T+ I ++ + SL +G +A R+ + +I I Y+ I RGTPL++QL V Sbjct: 10 LGSGMMTTIQIFLLTLIFSLPLGLLVAFGRMS-KNVVIRTITKIYISIMRGTPLMLQLLV 68 Query: 77 IFYGLPHI-GIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 +++G +I G+ S A++I+ +N++AY +EI R I S+P GQ++A+ +G + Sbjct: 69 VYFGPYYIFGVNISSSYRAYAVVIAFAINYAAYFAEIYRGGIESMPVGQYEAAKVLGYGK 128 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 QT IILPQ I +++E I+++K TS+A +I E+F A+ + ++ + +I + Sbjct: 129 TQTFVKIILPQVIKRILPSVTNEVITLVKDTSLAFSIAYAEMFSQAKALAASQ-KSMIPF 187 Query: 193 CELAFVYLILTSFCYIIQIKIE 214 A Y + F Y++ +E Sbjct: 188 VAAAIFYYV---FNYVVAFIME 206 >gi|30018826|ref|NP_830457.1| glutamine transport system permease protein glnP [Bacillus cereus ATCC 14579] gi|229126072|ref|ZP_04255094.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-Cer4] gi|29894368|gb|AAP07658.1| Glutamine transport system permease protein glnP [Bacillus cereus ATCC 14579] gi|228657394|gb|EEL13210.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-Cer4] Length = 218 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 104/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ I +V R PL++ F+ ++ LP IGI Sbjct: 25 SVIALIGSFILGVILAVMRIA-PIRILNWIGSAFVEFVRNIPLVLIAFIFYFALPVIGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ + +I+E+IR+ I+S+ KGQ +A+ + GLT Q + +++LPQ + Sbjct: 84 LNGFVAGTVTLTVYTATFIAEVIRAGILSVAKGQMEAARSSGLTYVQAMYYVVLPQAVKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VVPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|15902668|ref|NP_358218.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6] gi|116516616|ref|YP_816114.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] gi|15458207|gb|AAK99428.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae R6] gi|116077192|gb|ABJ54912.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] Length = 226 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 105/194 (54%), Gaps = 1/194 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A +TL IA + S ++G +++IR + +++ + Y+ + R T Sbjct: 5 IVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIR-HYRIPVLAQVATAYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IGIV S V + L +Y++E RS + +I + Q + AI Sbjct: 64 PLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q R+++LPQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183 Query: 189 LIIYCELAFVYLIL 202 I L YLI+ Sbjct: 184 DIALAMLVVAYLIM 197 >gi|295400875|ref|ZP_06810851.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] gi|294977138|gb|EFG52740.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] Length = 216 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/162 (37%), Positives = 94/162 (58%), Gaps = 1/162 (0%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 IS I V R PLL+ +F ++ LP +G+ D F A I++L + SA +SEI+R Sbjct: 51 ISQIFAVIVETIRNLPLLLIIFFTYFALPEVGLKLDKFYAAIVALVVFESAMLSEIVRGG 110 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + SI KGQ +A+ + GLT QT+ +IILPQ + P+ S+FIS+LK TS+A I +PE Sbjct: 111 LNSIDKGQIEAARSSGLTYIQTLWYIILPQALRRMVPPIVSQFISLLKDTSLAIVIALPE 170 Query: 174 IFQTAQRIVSTTYQPLI-IYCELAFVYLILTSFCYIIQIKIE 214 + AQ I +I I+ +A +Y ++ ++ ++E Sbjct: 171 LMNHAQIINGRNVNYVIPIFILVALMYFVVNYSLSLVSRRLE 212 >gi|223984172|ref|ZP_03634322.1| hypothetical protein HOLDEFILI_01615 [Holdemania filiformis DSM 12042] gi|223963868|gb|EEF68230.1| hypothetical protein HOLDEFILI_01615 [Holdemania filiformis DSM 12042] Length = 210 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 112/207 (54%), Gaps = 15/207 (7%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q+ + ++++LP+AC+ + FS + + Y+ + RGTPLL+QL Sbjct: 18 QVFFVTLMLSLPLACLLQALQQ------------FSGRALKPLFRGYITLMRGTPLLLQL 65 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF+G+P++G+ ++I I+ TLN++AY EI+R ++ ++ GQ +A +G +R+ Sbjct: 66 MFIFFGMPYLGLTLSREMSIYIAFTLNYTAYFIEILRGALSAVDPGQAEAGKMLGFSRRY 125 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 I LPQ + T+ + +E ++++K TS+ + E+ + A R TY + + Sbjct: 126 IYFRIQLPQALRTAMPAIGNEVLNLVKDTSLIYVLGASELLK-AGRSAVNTYATALPFVF 184 Query: 195 LAFVYLIL-TSFCYIIQIKIESSVTQH 220 + +YL + F +I+ +IE ++ + Sbjct: 185 VGILYLAMCGGFSWILG-RIEKRISYY 210 >gi|156933100|ref|YP_001437016.1| hypothetical protein ESA_00910 [Cronobacter sakazakii ATCC BAA-894] gi|156531354|gb|ABU76180.1| hypothetical protein ESA_00910 [Cronobacter sakazakii ATCC BAA-894] Length = 238 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 110/196 (56%), Gaps = 11/196 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S V+ ++ F+A+ R+ + ++ + + ++FRGTPL VQL V Sbjct: 20 FTGVAITLWLLIASVVMGGVLAVFLAIGRVS-ENKLVWFPIWLFTYVFRGTPLYVQLLVF 78 Query: 78 FYGL---------PHIGIVFDSFV-AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ P + F S + +++LTLN AY +EI +I ++P G+ +A+ A Sbjct: 79 YSGMYTLEVVKGTPLLNEFFRSGLNCTVLALTLNTCAYTTEIFAGAIRAVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G +R + R IILP + + S+E I +L ST++A T T+P++ + A+ I + TYQ Sbjct: 139 YGFSRFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQ 198 Query: 188 PLIIYCELAFVYLILT 203 P + A +YLI++ Sbjct: 199 PFTAFGIAAVLYLIIS 214 >gi|148994405|ref|ZP_01823628.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP9-BS68] gi|149005819|ref|ZP_01829558.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|168488380|ref|ZP_02712579.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae SP195] gi|168492228|ref|ZP_02716371.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC0288-04] gi|307126897|ref|YP_003878928.1| glutamine ABC transporter membrane-spanning permease [Streptococcus pneumoniae 670-6B] gi|147762759|gb|EDK69719.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|147927241|gb|EDK78275.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP9-BS68] gi|183573086|gb|EDT93614.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae SP195] gi|183573530|gb|EDT94058.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC0288-04] gi|306483959|gb|ADM90828.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae 670-6B] gi|332074507|gb|EGI84983.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17570] gi|332077127|gb|EGI87589.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17545] Length = 226 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 105/194 (54%), Gaps = 1/194 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A +TL IA + S ++G +++IR + +++ + Y+ + R T Sbjct: 5 IVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIR-HYRIPVLAQVATAYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IGIV S V + L +Y++E RS + +I + Q + AI Sbjct: 64 PLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q R+++LPQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183 Query: 189 LIIYCELAFVYLIL 202 I L YLI+ Sbjct: 184 DIALAMLVVAYLIM 197 >gi|121608673|ref|YP_996480.1| glutamine ABC transporter permease [Verminephrobacter eiseniae EF01-2] gi|121553313|gb|ABM57462.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 228 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 110/202 (54%), Gaps = 4/202 (1%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++W ++I + P L A + L I V ++G ++R + ++S + Y Sbjct: 12 DFDW-SVIAGALPALFKGAQLTVL-ITVFGLVGGTLLGVSFGLMRAY-GGRMLSSLGWAY 68 Query: 62 VWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + RGTP++VQ+ I++ LP IG+ D A I S+ +N AYI+EI+R + +S+P+G Sbjct: 69 VGLVRGTPIVVQVMFIYFALPGLIGLRVDPMSAAIASIIINSGAYIAEIVRGAFLSVPRG 128 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A A+GL + + ++ P L ++FI LK TS+ I + E+ + Q Sbjct: 129 LAEAGLAMGLPHWRVLAFVVGPVAFRRMTPALGNQFIVSLKDTSLFIVIGVGELTRQGQE 188 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 I++T ++ + I+ +A +YL+L Sbjct: 189 IMATNFRAVEIWTAVAVIYLLL 210 >gi|291457926|ref|ZP_06597316.1| amino acid ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291419470|gb|EFE93189.1| amino acid ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 215 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 93/143 (65%), Gaps = 6/143 (4%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS----FVAIIISLTLNFSAYISEI 109 +S ++ Y+ I RGTPL++QLFV++YG ++ + S +A+ I +N++AY +EI Sbjct: 44 LSALIRIYISIMRGTPLMLQLFVVYYGPYYLFRIRLSPGYRNIAVCIGFVINYAAYFAEI 103 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 RS I SIPKGQ++A+ +G +R Q+ IILPQ I +++E I+++K TS+A +I Sbjct: 104 YRSGIQSIPKGQYEAAEILGYSRAQSFLRIILPQVIKRILPAVTNEVITLVKDTSLAFSI 163 Query: 170 TIPEIFQTAQRIVS--TTYQPLI 190 ++ E+F A+ + S ++ PLI Sbjct: 164 SVMEMFTAAKALSSAQSSMTPLI 186 >gi|304395379|ref|ZP_07377262.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304356673|gb|EFM21037.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 219 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 52/154 (33%), Positives = 89/154 (57%), Gaps = 3/154 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 ++ ++ Y +F+GTPLL+QLF+ F+G+ GI + A ++LT SA++ +I S Sbjct: 50 LTRVIRGYTALFQGTPLLMQLFLAFFGVGLFGIDVAPWTAASLALTFYTSAFLVDIWYGS 109 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++PKGQW+AS +GLT QT+ ++ PQ I P + ++K T++AS I E Sbjct: 110 IRALPKGQWEASRCLGLTFGQTLWRVVAPQAIRIGIAPTVGFAVQVIKGTALASIIGFIE 169 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + + + + TYQP ++ +A Y ++ CY Sbjct: 170 LTKAGTILNNVTYQPFKVFGLVALGYFLM---CY 200 >gi|225075407|ref|ZP_03718606.1| hypothetical protein NEIFLAOT_00412 [Neisseria flavescens NRL30031/H210] gi|224953225|gb|EEG34434.1| hypothetical protein NEIFLAOT_00412 [Neisseria flavescens NRL30031/H210] Length = 248 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 65/184 (35%), Positives = 104/184 (56%), Gaps = 28/184 (15%) Query: 61 YVWIFRGTPLLVQL----FVIF--YGLPHIGIV------------FDSFVAIIISLTLNF 102 YV +FRGTPLL Q+ FVIF + P G + + +A +++L N Sbjct: 69 YVALFRGTPLLAQVIIWAFVIFPFFVHPTDGALISGEAAINFRRSYGPLIAGVMALIANS 128 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AY+ EI R+ I SI KGQ +A+ ++GLT Q +R++ILPQ + PL+ EFI++LK Sbjct: 129 GAYVCEIFRAGIQSIDKGQMEAARSLGLTYTQAMRYVILPQALRRMLPPLAGEFITLLKD 188 Query: 163 TSVASTITIPEIFQTAQRIVSTTY----QPLIIYCELAFVYLILTSFCYIIQIKIES--S 216 +S+ S I +PE+ + Q+ ++ Y +PL +A +YL+LTS + +++E + Sbjct: 189 SSLLSVIAVPELM-SVQKAITGQYSIFQEPL---YTVALIYLVLTSVLGWVFLRLERRYN 244 Query: 217 VTQH 220 V H Sbjct: 245 VKHH 248 >gi|254360616|ref|ZP_04976765.1| possible arginine ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica PHL213] gi|261493367|ref|ZP_05989893.1| putative arginine ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496633|ref|ZP_05993013.1| putative arginine ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|153091156|gb|EDN73161.1| possible arginine ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica PHL213] gi|261307836|gb|EEY09159.1| putative arginine ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311011|gb|EEY12188.1| putative arginine ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 227 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 100/173 (57%), Gaps = 10/173 (5%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG---------IVFDSFVAIIISLTLNFSA 104 + +++ ++ +F GTPLL+Q F+I+ G ++ D++ +++L LN +A Sbjct: 45 LKWLVNGFITLFTGTPLLIQFFLIYSGPGQFEWITESAAWVLLSDAWFCAMLALALNSAA 104 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 Y + + ++ +IPKGQW+ A+GL+R T++ I++P + + S+E + + K TS Sbjct: 105 YSTLLFHGAVKAIPKGQWETCAALGLSRLDTLK-ILVPYALKRALPSYSNEIVLVFKGTS 163 Query: 165 VASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +ASTITI +I A+++ T Y L IY +YL++T I+ K+ES V Sbjct: 164 LASTITIMDIMGYARQLYGTEYDALSIYGMAGVIYLVITGIMTIVLRKLESRV 216 >gi|104782882|ref|YP_609380.1| arginine/ornithine transport membrane protein AotM [Pseudomonas entomophila L48] gi|95111869|emb|CAK16593.1| arginine/ornithine transport membrane protein AotM [Pseudomonas entomophila L48] Length = 232 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 110/207 (53%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N+I D+ P L + +A F L+ + ++R+ ++++ Y ++ Sbjct: 5 YNVIWDAMPLYLGGLLTTLKLLALSLF-FGLLAAIPLGLMRVS-KQPLVNMTAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +SF+ ++ +N SAY +EII S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFEAVRESFLWPWLSSATFCACLAFAINTSAYTAEIIAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ AIG++R + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPHGEIEAAKAIGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + Y P Y YL LT Sbjct: 183 AARTVNAQFYLPFEAYITAGVFYLCLT 209 >gi|23098014|ref|NP_691480.1| amino acid ABC transporter permease [Oceanobacillus iheyensis HTE831] gi|22776238|dbj|BAC12515.1| amino acid ABC transporter permease [Oceanobacillus iheyensis HTE831] Length = 237 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 108/193 (55%), Gaps = 8/193 (4%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQ 73 + L I VT I S + S ++ F + R+ SD II FYV +FRGT L+VQ Sbjct: 26 EKLLQGIGVTFTILLASALFSYLMAFIAGLCRL--SDNVIIRKGTGFYVEVFRGTSLIVQ 83 Query: 74 LFVIFYGLPHI-GI-VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 LF +Y LP + G D++ +I++ LN+ AY+SE++RSSI+++ KGQ +A+ A+ ++ Sbjct: 84 LFWFYYALPMLFGFNSLDNWWIGVIAIGLNYGAYLSEVVRSSILAVSKGQSEAATALNMS 143 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF---QTAQRIVSTTYQP 188 R Q +R +I PQ + + I ILK TS+ S I + +I ++ + + S Sbjct: 144 RFQRMRLVIFPQAVRMMLPEFGNYTIQILKGTSLVSLIGLQDILYHGESLRNVSSMEMGG 203 Query: 189 LIIYCELAFVYLI 201 LI + L F +++ Sbjct: 204 LIYFVALIFYFVL 216 >gi|289627187|ref|ZP_06460141.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648679|ref|ZP_06480022.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330868024|gb|EGH02733.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 220 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 99/163 (60%), Gaps = 5/163 (3%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + ++ YV + R TP+LV + +I++ LP +GI D + I++L+L AY++E+ R+ Sbjct: 53 LRIVASIYVTVVRNTPILVLILLIYFALPGLGIRLDKLASFIVTLSLYAGAYLTEVFRAG 112 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP-LSSEFISILKSTSVASTITIP 172 ++SI KGQ +A AIGL Q +R I+ Q + + +P LS+ FIS+ K TS+A+ I +P Sbjct: 113 LLSIHKGQREAGLAIGLGEWQ-VRAYIIVQVMLRNVLPALSNNFISLFKDTSLAAAIAVP 171 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 E+ A++I +Y+ + + +Y++ CY+I + + + Sbjct: 172 ELTYYARKINVESYRVIETWLVTTALYVVA---CYVIAMLLRT 211 >gi|126730762|ref|ZP_01746572.1| amino acid ABC transporter protein, permease protein [Sagittula stellata E-37] gi|126708928|gb|EBA07984.1| amino acid ABC transporter protein, permease protein [Sagittula stellata E-37] Length = 222 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/188 (30%), Positives = 110/188 (58%), Gaps = 5/188 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W S + + VTL ++ V++L++G A+ R S+ II + ++ Sbjct: 1 MRWDW--AYAQSILPRIAEGLTVTLQATVLATVLALVVGLGFALGR-RSSNVIIRNVFYW 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 R TP+LVQ++ +F+ LP +G+ + + I++L L+ SAY+SE+ R+ I S+ KG Sbjct: 58 LCEFIRRTPVLVQMYFVFFVLPRLGLTLPALTSGILALGLHTSAYMSEVYRAGIESVAKG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL-KSTSVASTITIPEIFQTAQ 179 QW+ + A+ + + H+ILPQ + +P + ++ ++ K T++ STIT+ E+ TA+ Sbjct: 118 QWEGARALNIPIVRLWVHVILPQAL-PPMIPAAGNYVLMMFKETALLSTITVLEMMGTAR 176 Query: 180 RIVSTTYQ 187 I + TY+ Sbjct: 177 VIGNETYR 184 >gi|294498360|ref|YP_003562060.1| putative amino acid ABC transporter permease [Bacillus megaterium QM B1551] gi|294348297|gb|ADE68626.1| putative amino acid ABC transporter, permease protein [Bacillus megaterium QM B1551] Length = 233 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 71/197 (36%), Positives = 115/197 (58%), Gaps = 16/197 (8%) Query: 42 IAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP------HIGIVFDSFVA-I 94 IA+IRI ++S + Y+ R TPLLVQLF++++GLP HI I S V + Sbjct: 41 IALIRIQ-KKPVLSKMATIYLSFMRCTPLLVQLFLVYFGLPQLLLLVHIDINSWSRVTFL 99 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 +I+ +L+ +A +SE+IRS+ +SI KGQ++A+Y+IG+ Q++R IILPQ + L + Sbjct: 100 VIAFSLHTAAPLSEVIRSAYLSIDKGQFEAAYSIGMNYFQSLRRIILPQAFVAALPNLGN 159 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI--IYCELAFVYLILTSFCYIIQI- 211 IS+LK T++A +I I +I + I+ Y + IY ++ VY S C +I+I Sbjct: 160 ATISLLKDTALAFSIGIIDIMGQVRLILGNNYGIGMFEIYVTISLVYW---SMCIVIEII 216 Query: 212 --KIESSVTQHTYSVDK 226 +E + + S+ K Sbjct: 217 VSYLEKHLKKGRVSISK 233 >gi|282165413|ref|YP_003357798.1| putative amino acid ABC transporter permease protein [Methanocella paludicola SANAE] gi|282157727|dbj|BAI62815.1| putative amino acid ABC transporter permease protein [Methanocella paludicola SANAE] Length = 442 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 111/205 (54%), Gaps = 8/205 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FNL + + + ++VT+ ++ ++ I L+IG + + R+ ++ + + YV Sbjct: 202 FNLFTYALGKEVTRGLLVTIQLSLVAMSIGLVIGLVMGLGRVS-TNFLFRAVASIYVEGI 260 Query: 66 RGTPLLVQLFVIFYGLPHI-----GIVF--DSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RG P+L+QL + +GLP + G F D F A +I+L++N AY+ EI + I ++ Sbjct: 261 RGLPILLQLLFVNFGLPFLISDLTGGQFNIDGFTACVIALSINSGAYMGEIFKGGIEAVH 320 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A+ ++GL+ Q++ IILPQ L +EFI+++K +S+ I++ E+ + Sbjct: 321 KGQMEAARSLGLSYNQSMLFIILPQAFKIVLPTLGNEFIALIKDSSIGMVISVMEVVWWS 380 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT 203 + I + Y VYL +T Sbjct: 381 KSIGAEYYNTFTPLLAAGMVYLCIT 405 >gi|307261839|ref|ZP_07543503.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868456|gb|EFN00269.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 223 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 113/211 (53%), Gaps = 8/211 (3%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L+Y+A ++TL +A S ++ L++ V+ IS ++ + RG P ++ + Sbjct: 8 LIYSATLMTLGLALTSLIVGLLLSMLFVVLETS-KQPCISKPTSVFLALLRGLPEILVVL 66 Query: 76 VIFYGLPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +IF+G + + F +F +++L+L FSAY S+ +R +I ++P GQW++ A+ Sbjct: 67 LIFFGSTELVEKITDEYVEFSAFSCGVLALSLIFSAYASQSLRGAIQAVPNGQWESGAAL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+R T II+PQ + LS++++ +LK T++ S I + ++ + I + +QP Sbjct: 127 GLSRAHTFLRIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLMRQTDLINTNEHQP 186 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 Y A +YL +T +I +E T+ Sbjct: 187 FTWYGLAALIYLAITLISQVIIAGLEKRFTR 217 >gi|312958426|ref|ZP_07772946.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311286969|gb|EFQ65530.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 240 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 117/230 (50%), Gaps = 13/230 (5%) Query: 2 KYE-WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 +YE N + F L A ++T+ +A + + L++G A+ + + + Sbjct: 6 RYENTMNFDLYGFGPALAAGALMTVKLALTALCLGLVLGLAGALAKTSPYKPL-QWLGGT 64 Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIGIVFD-------SFVAIIISLTLNFSAYISEI 109 Y I RG P L+ + +I++G + +G + D +F A +I+L L F AY +E+ Sbjct: 65 YSTIVRGVPELLWVLLIYFGTINAMRGLGELLDIPDLSLSAFAAGVIALGLCFGAYATEV 124 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 +R +IISIPKG +A A+GL++ + +I+PQ + L + F+ ++K T++ + I Sbjct: 125 LRGAIISIPKGHREAGVALGLSKVRIFTRLIMPQMWRIALPGLGNLFLILMKDTALVTVI 184 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + EI + AQ V+ T QP Y A +YL LTS + +E + Sbjct: 185 GLEEIMRHAQIAVTVTKQPFTFYMVAALIYLGLTSLSMVAMHFLEKRAAR 234 >gi|116748260|ref|YP_844947.1| polar amino acid ABC transporter inner membrane subunit [Syntrophobacter fumaroxidans MPOB] gi|116697324|gb|ABK16512.1| polar amino acid ABC transporter, inner membrane subunit [Syntrophobacter fumaroxidans MPOB] Length = 246 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 5/222 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++Y W + + L + T IA + + +G F + R S M Sbjct: 28 IEYPWNWRVPWEYRWLFFRGFYTTFIIAVGATSMGFCLGVFGGIARTSRSVLARETAM-L 86 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI-IISLTLNFSAYISEIIRSSIISIPK 119 YV FRGTPLL+Q++ IFY + +D+ V I + SL + AYI+E++R+ I SI + Sbjct: 87 YVEFFRGTPLLIQIY-IFYFCVAAAVHYDNPVIIGMFSLAVFSGAYITEMVRAGIESIDR 145 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ + GL +T+R+++ PQ P++ +F+S++K +S+ S I++ E+ + ++ Sbjct: 146 GQIEAAMSTGLNDWETMRYVVFPQAFRRIIPPVAGQFVSVIKDSSLLSVISVRELTKASE 205 Query: 180 RIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQH 220 I +TTY+ Y LA +YLI+T Y+ Q ++E + Sbjct: 206 IINATTYKTFEAYLPLAALYLIITYPLSYLTQ-RLEQKIKHD 246 >gi|218662211|ref|ZP_03518141.1| amino acid ABC transporter permease [Rhizobium etli IE4771] Length = 229 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 112/204 (54%), Gaps = 22/204 (10%) Query: 33 VISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYG----LPHIG 85 VIS+ GF IA+ F + L+ Y FRGTPLL+QL++++YG LP + Sbjct: 25 VISVTFGFIIAIGLAFAQVSGGRLTRLLARGYCTFFRGTPLLIQLWLLYYGVGSLLPMVP 84 Query: 86 ---------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 I+ + F +S TLN++AY +E++R +++++PKG+ +A A GL+ + Sbjct: 85 GIRQSLFWPILREGFFFAAVSFTLNYAAYEAEVLRGALLAVPKGELEAGRAFGLSPWKLT 144 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPLIIYC 193 R I LP+ I + ++ E + LK+T +A T+T+ +++ A ++ T Y+PL++ Sbjct: 145 RRIWLPRAIRIALPTIAGEIVMQLKATPLAFTVTVMDLYAVANKVRQDTLLVYEPLLV-- 202 Query: 194 ELAFVYLILTSFCYIIQIKIESSV 217 + YL LT+ + +E+ V Sbjct: 203 -VTLFYLALTAVIARVFRGLEAHV 225 >gi|320093690|ref|ZP_08025558.1| ABC superfamily ATP binding cassette transporter, permease protein [Actinomyces sp. oral taxon 178 str. F0338] gi|319979350|gb|EFW10839.1| ABC superfamily ATP binding cassette transporter, permease protein [Actinomyces sp. oral taxon 178 str. F0338] Length = 312 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 66/235 (28%), Positives = 117/235 (49%), Gaps = 24/235 (10%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 Y+W + F Q + + ++ T+ + ++ +I + +A++R + ++ + Y Sbjct: 44 NYQWSTVWAWLFSQSIMSGVLFTIILTVLAMLIGTALAITMAIMRQSI-NPVLKWVATAY 102 Query: 62 VWIFRGTPLLVQLFVIFY------------GLP--------HIGIVFDSFVAIIISLTLN 101 +W FRGTP+ QL IF+ G+P F F + L LN Sbjct: 103 IWFFRGTPIYTQL--IFWSLLPTLYPKLSLGIPFGPEFVTFETAAYFTPFWMAFVGLGLN 160 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 AY++EI+R+ ++S+ KGQW+A+ A+G+ R R I+LPQ + P+ +E IS+LK Sbjct: 161 EGAYLAEIMRAGLLSVDKGQWEAATALGMPRSLIFRRIVLPQAMRVIVPPIGNETISMLK 220 Query: 162 STSVASTITIP-EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +TS+ S I E+ A++ + P+ + A YL++T+ IQ IE Sbjct: 221 TTSLVSAIPFTLELTFVARQKGQAMFAPVPLLIAAAIWYLLITTLLMWIQSYIEK 275 >gi|149020351|ref|ZP_01835243.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP23-BS72] gi|147930653|gb|EDK81635.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP23-BS72] Length = 226 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 105/194 (54%), Gaps = 1/194 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A +TL IA + S ++G +++IR + +++ + Y+ + R T Sbjct: 5 IVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIR-HYRIPVLAQVATAYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IGIV S V + L +Y++E RS + +I + Q + AI Sbjct: 64 PLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLETISQTQQEIGLAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q R+++LPQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183 Query: 189 LIIYCELAFVYLIL 202 I L YLI+ Sbjct: 184 DIALAMLVVAYLIM 197 >gi|239820511|ref|YP_002947696.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] gi|239805364|gb|ACS22430.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 223 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 49/160 (30%), Positives = 87/160 (54%), Gaps = 7/160 (4%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAY 105 ++ + Y + RG P L+ +F +F+G L + D+F+A + +L L+F AY Sbjct: 46 VLRAAGNGYAAVVRGIPDLLIVFAVFFGGSLTLAALTGRYVEIDTFLAGVAALALSFGAY 105 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 +EI R +++++PK Q +A+ +GL+R Q + ++LPQ + P ++ I +LK TS+ Sbjct: 106 AAEIARGALLAVPKTQREAARTLGLSRAQALWTVVLPQAARFALAPFGNQSIVLLKQTSI 165 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSF 205 S + E+ + A T +P +Y A +YL LT F Sbjct: 166 VSIVGCDELMRKAAEASGATREPFTMYLAAACIYLALTGF 205 >gi|125547633|gb|EAY93455.1| hypothetical protein OsI_15254 [Oryza sativa Indica Group] Length = 434 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/154 (37%), Positives = 89/154 (57%), Gaps = 10/154 (6%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEI 109 Y ++FRGTPL VQL V + G+ + IV S I++LTLN AY +EI Sbjct: 26 LYTYVFRGTPLYVQLLVFYSGMYSLEIVRGSEFLNAFFRSGLNCTILALTLNTCAYTTEI 85 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 +I S+P G+ +A+ A G +R + R IILP + T+ S+E I +L ST++A T Sbjct: 86 FAGAIRSVPHGEIEAANAYGFSRFKMYRCIILPSALRTALPAYSNEVILMLHSTALAFTA 145 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 T+P++ + A+ I + TYQP + A +YLI++ Sbjct: 146 TVPDLLKIARDINAATYQPFYAFGIAAVLYLIIS 179 >gi|293396873|ref|ZP_06641147.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] gi|291420344|gb|EFE93599.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] Length = 222 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 113/201 (56%), Gaps = 13/201 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 +L + + V++LI+ + VI + +++ ++ Y+ +F GTPLLVQ+F+I+YG Sbjct: 15 SLTLTMAALVVALILSLLLTVI-LTLKIPVLTPLVKIYITLFTGTPLLVQIFLIYYGPGQ 73 Query: 84 IGIVFD----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 + D ++ +I+L LN +AY +++ ++ +IP GQW + A+G++R+ Sbjct: 74 FPAIRDYPWLWSLLSQPWLCAMIALALNSAAYTTQLFYGAVRAIPAGQWQSCEALGMSRR 133 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 QT+R I+LP + S+E + + KSTS+A TIT+ E+ +Q + TY ++++ Sbjct: 134 QTLR-ILLPFAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQLMYGRTYD-VMVFA 191 Query: 194 ELAFVYLILTSFCYIIQIKIE 214 VYLI+ ++ +E Sbjct: 192 AAGLVYLIVNGLLTLLMRLVE 212 >gi|312111275|ref|YP_003989591.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. Y4.1MC1] gi|311216376|gb|ADP74980.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y4.1MC1] Length = 216 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/162 (37%), Positives = 94/162 (58%), Gaps = 1/162 (0%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 IS I V R PLL+ +F ++ LP +G+ D F A I++L + SA +SEI+R Sbjct: 51 ISQIFAVIVETIRNLPLLLIIFFTYFALPEVGLKLDKFYAAIVALVVFESAMLSEIVRGG 110 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + SI KGQ +A+ + GLT QT+ +IILPQ + P+ S+FIS+LK TS+A I +PE Sbjct: 111 LNSIDKGQIEAARSSGLTYIQTLWYIILPQALRRMVPPIVSQFISLLKDTSLAIVIALPE 170 Query: 174 IFQTAQRIVSTTYQPLI-IYCELAFVYLILTSFCYIIQIKIE 214 + AQ I +I I+ +A +Y ++ ++ ++E Sbjct: 171 LMNHAQIINGRNVNYVIPIFILVALMYFVVNYSLSLVSRRLE 212 >gi|157371561|ref|YP_001479550.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157323325|gb|ABV42422.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 234 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 68/196 (34%), Positives = 110/196 (56%), Gaps = 11/196 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + VTL + S V+ ++ +AV R+ S T + + Y +IFRGTPL VQL V Sbjct: 20 FTGVAVTLWLLISSVVMGGLLAIPMAVARVS-SITWVRFPVWLYTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F I++LTLN AY +EI +I S+ G+ +A+ A Sbjct: 79 YSGMYSLEIVRGTDFLNAFFRSGLNCTILALTLNTCAYTTEIFAGAIRSVSHGEIEAANA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G +R + R IILP + T+ S+E I +L ST++A T T+P++ + A+ I + TYQ Sbjct: 139 YGFSRFKMYRCIILPSALRTALPAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQ 198 Query: 188 PLIIYCELAFVYLILT 203 P + A +YLI++ Sbjct: 199 PFYAFGIAAVLYLIIS 214 >gi|307246272|ref|ZP_07528353.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306852881|gb|EFM85105.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 223 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 114/211 (54%), Gaps = 8/211 (3%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L+Y+A ++TL +A S ++ L++ V+ +S ++ + RG P ++ + Sbjct: 8 LIYSATLMTLGLALTSLIVGLLLSMLFVVLETS-KQPCVSKPTSIFLALLRGLPEILVVL 66 Query: 76 VIFYGLPHI-----G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +IF+G + G + F +F +++L+L FSAY S+ +R +I ++P GQW++ A+ Sbjct: 67 LIFFGSTELVEKITGEYVEFSAFSCGVLALSLIFSAYASQSLRGAIQAVPNGQWESGAAL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+R T II+PQ + LS++++ +LK T++ S I + ++ + I + +QP Sbjct: 127 GLSRAHTFLRIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLMRQTDLINTNEHQP 186 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 Y A +YL +T +I +E T+ Sbjct: 187 FTWYGLAALIYLAITLISQVIIAGLEKRFTR 217 >gi|209546710|ref|YP_002278628.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537954|gb|ACI57888.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 213 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/177 (35%), Positives = 101/177 (57%), Gaps = 9/177 (5%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHF------YVWIFRGTPLLVQLFVIFYGLPHIGI 86 V+S++IGF IA I S ++S F ++ FRG PLLV+L +I+ LP IGI Sbjct: 21 VVSILIGFAIA---ILLSGMLLSGRGLFVRPAQIFISFFRGVPLLVELLLIYNLLPVIGI 77 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 S VA II L+L +AY +E +R S+P G +++ +GLT +Q R I +P + Sbjct: 78 NVPSIVAAIIGLSLCTAAYQAENLRGGFASVPLGLVESAEMVGLTPRQIFRRIKVPIALR 137 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + L +E I ILK++S+ S + I E+ + AQ + +T+ PL ++ +YL++ Sbjct: 138 LTFPALVNEAILILKASSLVSVVGIVELTRMAQDLAGSTFLPLQLFASAGLIYLVIN 194 >gi|146338610|ref|YP_001203658.1| ABC transporter permease/ATP-binding protein [Bradyrhizobium sp. ORS278] gi|146191416|emb|CAL75421.1| Putative ABC transporter (ATP-binding/permease protein) [Bradyrhizobium sp. ORS278] Length = 542 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 55/162 (33%), Positives = 95/162 (58%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +++ I Y IFRGTPL++Q+ + LPHIGI + +A ++L N + +I+E++RS Sbjct: 48 LLAAIARGYTVIFRGTPLILQMVFAYDALPHIGIKLPAVLAAGLALACNEAPFIAEMLRS 107 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 ++ + +GQ A A+G+T +R II PQ I T +E +S LK++S+AS I + Sbjct: 108 GVLGVDRGQLLAGQALGMTPGVLMRRIIAPQAIRTMIPAFGNEAVSALKNSSLASVIAVQ 167 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 E+ + ++ S+T+ I+ +YL LT +IQ+ +E Sbjct: 168 ELTLRSTQLASSTFDFFSIFFASGLLYLGLTGAISVIQLALE 209 >gi|260575379|ref|ZP_05843378.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sp. SW2] gi|259022299|gb|EEW25596.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sp. SW2] Length = 259 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 114/192 (59%), Gaps = 6/192 (3%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS-LIMHFYVWIFRGTPLLV 72 P L + TL IA ++ VI+L+I A++R+ S++I + YV + R TPL+V Sbjct: 42 PGPLLIGLGQTLRIAALAGVIALVIALITAILRL--SNSISGRWLARAYVEVIRNTPLIV 99 Query: 73 QLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 Q+ + ++ + P +GI + F A +++L L +A++SEIIR+ I+ + QW+A+ ++GLT Sbjct: 100 QISMFYFAIAPLLGI--ERFWAGVLALALFEAAFLSEIIRAGILGVALTQWEAAASLGLT 157 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 R QT R I+LPQ + PL+S ++++ +S+ S I + E+ + ++ + I Sbjct: 158 RPQTYRLIVLPQALRAMLPPLTSSAVALVMDSSIVSVIALAELTTAGRNAIADNFLSFEI 217 Query: 192 YCELAFVYLILT 203 + +A +YL +T Sbjct: 218 WFLVAGLYLTIT 229 >gi|325278185|ref|ZP_08143684.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] gi|324096679|gb|EGB95026.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] Length = 236 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 101/170 (59%), Gaps = 11/170 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLP-------HIGIVF---DSFVAIIISLTLNFSAYISEII 110 YV+ FRG+PLL QLF+++YGL +G+ + +++ +++ TLN +AY +EI Sbjct: 66 YVYFFRGSPLLAQLFLLYYGLGSFKSFWQEVGLWWFFREAWFCTLLAFTLNTAAYQAEIF 125 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R S++++ GQ++A+ A+ L R T +ILPQ++ + PL +E I ++K++++AS +T Sbjct: 126 RGSLMAVAPGQYEAARALNLKRSTTFFKVILPQSLLVAIGPLGNELILMIKASAIASLVT 185 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I ++ + S ++ IY A +YL++ + +E+ + +H Sbjct: 186 IYDLMGVTKLAFSRSFD-FQIYLWAAVLYLVIVEVVRRLLKHLEARLGRH 234 >gi|296156736|ref|ZP_06839574.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295893335|gb|EFG73115.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 226 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 112/206 (54%), Gaps = 5/206 (2%) Query: 4 EWFNL--IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 WF +I F + + +TL + +FVI L +G + + R+ + +L++ + Sbjct: 3 NWFGKGGVIAPFLDGVVSGTALTLAASACAFVIGLALGVVLLLARMSPFGPLRALVV-LW 61 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + RGTP L+ + + +Y +P + I A I +L N SAYI EI+R S+ +I G Sbjct: 62 VSLIRGTPALIHMLIAYYMVPALLNISISPVTAGIAALACNTSAYIVEILRGSLGTISWG 121 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q A YA+G+ Q RH++LPQ I + PL+SEF +LK++S+ S I +PE+ A+ Sbjct: 122 QRAAGYALGMRTAQVWRHVLLPQMIYRAIPPLTSEFTLLLKASSLMSIIAVPELATVARN 181 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFC 206 T PL ++ A VY ++ FC Sbjct: 182 ATLQTDLPLQVFTITAAVYFLIL-FC 206 >gi|126208816|ref|YP_001054041.1| arginine transporter permease subunit ArtQ [Actinobacillus pleuropneumoniae L20] gi|126097608|gb|ABN74436.1| arginine transport system permease protein ArtQ [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 223 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 113/211 (53%), Gaps = 8/211 (3%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L+Y+A ++TL +A S ++ L++ V+ IS ++ + RG P ++ + Sbjct: 8 LIYSATLMTLGLALTSLIVGLLLSMLFVVLETS-KQPCISKPTSVFLALLRGLPEILVVL 66 Query: 76 VIFYGLPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +IF+G + + F +F +++L+L FSAY S+ +R +I ++P GQW++ A+ Sbjct: 67 LIFFGSTELVEKITSEYVEFSAFSCGVLALSLIFSAYASQSLRGAIQAVPNGQWESGAAL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+R T II+PQ + LS++++ +LK T++ S I + ++ + I + +QP Sbjct: 127 GLSRAHTFLRIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLMRQTDLINTNEHQP 186 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 Y A +YL +T +I +E T+ Sbjct: 187 FTWYGLAALIYLAITLISQVIIAGLEKRFTR 217 >gi|322376964|ref|ZP_08051457.1| amino acid ABC transporter, permease protein [Streptococcus sp. M334] gi|321282771|gb|EFX59778.1| amino acid ABC transporter, permease protein [Streptococcus sp. M334] Length = 226 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 105/194 (54%), Gaps = 1/194 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A +TL IA + S ++G +++IR + +++ + Y+ + R T Sbjct: 5 IVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIR-HYRIPVLAQVATAYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IGIV S V + L +Y++E RS + ++ + Q + AI Sbjct: 64 PLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAVSQTQQEIGLAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q R+++LPQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183 Query: 189 LIIYCELAFVYLIL 202 I L YLI+ Sbjct: 184 DIALAMLVIAYLIM 197 >gi|283852826|ref|ZP_06370089.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] gi|283571818|gb|EFC19815.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] Length = 253 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 108/187 (57%), Gaps = 1/187 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++Y W + ++ ++ A + +T+ I+ + V+ L +G + + S ++S + Sbjct: 29 LRYHWDWEAVFAYRRIFVAGLGMTMVISIGAIVLGLALGLASGLASVSGS-VVLSEMAAL 87 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV FRGTPLLVQ+ + ++ + + V +V +L AYISE++R+ + S+ +G Sbjct: 88 YVGAFRGTPLLVQILIFYFCIGVLVHVDSPYVIGTATLACFSGAYISEMVRAGVESVDRG 147 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+ + + GLT +Q + ++I PQ P++ +F+S +K +S+ S I++ E+ + A+ Sbjct: 148 QWETAVSSGLTHRQALFYVIFPQAARRIVPPVTGQFVSCIKDSSLLSVISVRELTKAAEV 207 Query: 181 IVSTTYQ 187 + +TTY+ Sbjct: 208 VNATTYK 214 >gi|251799196|ref|YP_003013927.1| polar amino acid ABC transporter inner membrane protein [Paenibacillus sp. JDR-2] gi|247546822|gb|ACT03841.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. JDR-2] Length = 236 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 112/200 (56%), Gaps = 14/200 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++A+ TL I +S + +IG A+ RI+ ++S + YV RGTP+L L + Sbjct: 15 LWSAVPTTLLITLVSVSVGFVIGVITALARIY-RIPVLSQLSSGYVTFIRGTPMLTHLLL 73 Query: 77 IFYGLP----HIGIVFD-----SFVAII----ISLTLNFSAYISEIIRSSIISIPKGQWD 123 I++GLP + FD + + +I IS ++ AY+SE++RS ++++ +GQ + Sbjct: 74 IYFGLPMLVDGLSAQFDLGWNSAKIPMIGFAYISFSITAGAYLSEVVRSGLLAVDRGQME 133 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IG+T Q +R I+ PQ + S LS+ I +L +++A T+++ ++ AQ + S Sbjct: 134 AARSIGMTTPQALRRIVFPQALAASLPNLSNSVIGMLHGSTLAFTVSVVDLNAKAQIVAS 193 Query: 184 TTYQPLIIYCELAFVYLILT 203 T ++ Y A ++ LT Sbjct: 194 TNWKFFESYVAAALIFWGLT 213 >gi|332162409|ref|YP_004298986.1| histidine transport system permease protein HisM [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606494|emb|CBY27992.1| histidine ABC transporter, permease protein HisM [Yersinia enterocolitica subsp. palearctica Y11] gi|325666639|gb|ADZ43283.1| histidine transport system permease protein HisM [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863721|emb|CBX73822.1| histidine transport system permease protein hisM [Yersinia enterocolitica W22703] Length = 238 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 11/196 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + VTL + S V+ ++ +AV R+ I L + + +IFRGTPL VQL V Sbjct: 20 FTGMAVTLWLLITSVVMGGLLAIPLAVARVA-ERRWIRLPVWIFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F I++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYSLEIVRGNDLLNAFFRSGLNCTILALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G +R + R IILP + + S+E I +L ST++A T T+P+I + A+ I + TYQ Sbjct: 139 YGFSRFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDILKIARDINAATYQ 198 Query: 188 PLIIYCELAFVYLILT 203 P + A +YLI++ Sbjct: 199 PFYAFGIAAVLYLIIS 214 >gi|126667082|ref|ZP_01738057.1| putative amino acid ABC transporter permease protein [Marinobacter sp. ELB17] gi|126628488|gb|EAZ99110.1| putative amino acid ABC transporter permease protein [Marinobacter sp. ELB17] Length = 241 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 116/205 (56%), Gaps = 3/205 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M YE+ +N++ + P+LL A V TL ++ ++ ++ ++I +A+ ++ S I Sbjct: 21 MDYEFHWNVVFQNMPELLNGAFV-TLHVSVLAMLLGIVIAILLAIAKMNNSKPY-CYIAT 78 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V I R TP L Q+++ ++GL +GI +VA++ +L + Y++E R SIP Sbjct: 79 TWVEIARNTPALFQIYMAYFGLGALGIHLSPYVAVLSALVFINAGYLTETFRGGFQSIPN 138 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q+ AS ++G+T Q R+IILPQ + P++++F+ + +S+ + + E+ T Q Sbjct: 139 TQYSASKSLGMTSIQVYRYIILPQMLRRIYHPMTNQFVWSILMSSLGILVGMGELSGTTQ 198 Query: 180 RIVSTTYQPLIIYCELAFVYLILTS 204 R+ S +++ L + A +Y I+T Sbjct: 199 RLQSLSFRTLEFFMVAAVMYFIITK 223 >gi|153951698|ref|YP_001398010.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. doylei 269.97] gi|152939144|gb|ABS43885.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. doylei 269.97] Length = 250 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 105/191 (54%), Gaps = 10/191 (5%) Query: 20 AIVVTLPIACISFVISLI---IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 + TL ++ ++ I+ I IG +A R II YV +F+ PL++Q+F Sbjct: 47 GFIYTLEVSILALFIATIFGTIGGVMATSRF----KIIRAYTRIYVELFQNVPLVIQIFF 102 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +FY LP +GI D F ++ + AY+SE++RS I+++P+GQ++AS + G T Q + Sbjct: 103 LFYALPVLGIRLDIFTIGVLGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQQM 162 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 R+II+PQTI P++++ ++++K+TSV + E+ +A + Y A Sbjct: 163 RYIIVPQTIRIILPPMTNQMVNLIKNTSVLLIVGGAELMHSADSYAADYGNYASAYIFAA 222 Query: 197 FVYLILTSFCY 207 +Y I+ CY Sbjct: 223 VLYFII---CY 230 >gi|73661928|ref|YP_300709.1| amino acid ABC transporter permease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494443|dbj|BAE17764.1| putative ABC-type amino acid transport system permease component [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 227 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/190 (33%), Positives = 107/190 (56%), Gaps = 13/190 (6%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W +L+ QL +TL + +S + +LI+GF +A IR+ ++S ++ Y+ Sbjct: 5 NWLDLLYQVLQQL-----PLTLLMIVLSLIFALILGFILATIRLQ-KIKLLSPVVKVYIS 58 Query: 64 IFRGTPLLVQLFVIFYGLP------HIGIV-FDSFVAIIISLTLNFSAYISEIIRSSIIS 116 R TPLL+QLF++++ LP HI I F +I++ TL+ AY+SEIIR+ S Sbjct: 59 FIRSTPLLLQLFLVYFALPQLLLFVHIDINHFSRLFFVILAFTLHTGAYLSEIIRAGYQS 118 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + Q +A +IGLT + ++ IILPQ + S L+++ I ++K TS+A TI I ++ Sbjct: 119 VDYRQIEAGLSIGLTYPRILKEIILPQALRNSIPNLTTQIIELVKDTSLAFTIGIIDMMG 178 Query: 177 TAQRIVSTTY 186 + I+ Y Sbjct: 179 QVKLIIGNNY 188 >gi|330971239|gb|EGH71305.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 220 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 95/162 (58%), Gaps = 3/162 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + ++ YV + R TP+LV + +I++ LP +GI D + I++L+L Y++E+ R+ Sbjct: 53 LRIVASIYVTVVRNTPILVLILLIYFALPGLGIRLDKLASFIVTLSLYAGTYLTEVFRAG 112 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++SI KGQ +A AIGL Q +II+P + LS+ FIS+ K TS+A+ I +PE Sbjct: 113 LLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPE 172 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + A++I +Y+ + + +Y++ CY+I + + + Sbjct: 173 LTYYARKINVESYRVIETWLVTTALYVVA---CYVIALLLRT 211 >gi|300717676|ref|YP_003742479.1| lysine/arginine/ornithine ABC transporter permease [Erwinia billingiae Eb661] gi|299063512|emb|CAX60632.1| lysine/arginine/ornithine ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 238 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 65/213 (30%), Positives = 117/213 (54%), Gaps = 11/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 ++ + +TL + IS V+ + +++ R+ S T + + + +IFRGTPL VQL + Sbjct: 20 FSGVAITLWLLIISVVLGGCLAVLLSIARVS-SITAVRFPVWLFTYIFRGTPLYVQLLIF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGNDLLNAFFRSGLNCTLLALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R II+P + T+ S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSTFKLYRCIIMPSALRTALPAYSNEVILMLHSTALAFTATVPDLLKVARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P + + A +YL+++ + K E +H Sbjct: 199 PFVAFGIAAVLYLMISYVLISLFRKAEKRWLKH 231 >gi|257790427|ref|YP_003181033.1| polar amino acid ABC transporter, inner membrane subunit [Eggerthella lenta DSM 2243] gi|317490080|ref|ZP_07948569.1| binding-protein-dependent transport system inner membrane component [Eggerthella sp. 1_3_56FAA] gi|325833821|ref|ZP_08166171.1| putative arginine ABC transporter, permease protein ArtQ [Eggerthella sp. HGA1] gi|257474324|gb|ACV54644.1| polar amino acid ABC transporter, inner membrane subunit [Eggerthella lenta DSM 2243] gi|316910785|gb|EFV32405.1| binding-protein-dependent transport system inner membrane component [Eggerthella sp. 1_3_56FAA] gi|325485179|gb|EGC87651.1| putative arginine ABC transporter, permease protein ArtQ [Eggerthella sp. HGA1] Length = 217 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 114/211 (54%), Gaps = 8/211 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 +LL + + TL I + + SL +G +A R+ + +L+ FY+ + RGTPL++QL Sbjct: 8 ELLLSGLAFTLQIFVTTLIGSLPLGVLVAFGRMSRFKPV-ALVTRFYISVMRGTPLMLQL 66 Query: 75 FVIFYGLPH--IGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 + +G P+ G+ + + A I +N++AY EI R I SIP+GQ++A+ +G Sbjct: 67 MALMFG-PYYLFGLQMGNDWKYWACSIGFIINYAAYFGEIYRGGIQSIPRGQYEAAEVLG 125 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 +R QT I+LPQ + +S+E I+++K TS+A + I E+F A+ I ++ + Sbjct: 126 YSRFQTFMKIVLPQVVKRILPAMSNEIITLVKDTSLAFVLGIMEMFSQAKAIAASQVS-M 184 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + Y +Y + II ++E + + Sbjct: 185 LPYVIAGVIYWVFNFIVEIILTRVEKRLNYY 215 >gi|83035006|gb|ABB97482.1| GlnB [Halobacillus dabanensis] Length = 218 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 68/188 (36%), Positives = 104/188 (55%), Gaps = 2/188 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +V TL I + +I ++G R+ + +I I YV RGTP+L Q+ Sbjct: 16 LLEGLVWTLLITFVGLIIGFVLGAIFGFARLS-KNKLIYGIATVYVEAVRGTPILAQILF 74 Query: 77 IFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I++GL + G+ D A II++ +N AYI+EI+R ++ SI KGQ +A +IGLTR QT Sbjct: 75 IYFGLSDLMGVNIDKITASIIAIAINAGAYIAEIVRGAVYSIDKGQEEAGRSIGLTRNQT 134 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R+II PQ PL ++F+ LK TS+ S I + E+ Q+ T+Q + Sbjct: 135 MRYIIWPQAFRRMIPPLGNQFVISLKDTSLFSVIAVGELLYMGQQYYGMTFQAFQALTMV 194 Query: 196 AFVYLILT 203 +YLI+T Sbjct: 195 CVMYLIIT 202 >gi|315641164|ref|ZP_07896242.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Enterococcus italicus DSM 15952] gi|315483088|gb|EFU73606.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Enterococcus italicus DSM 15952] Length = 231 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 114/196 (58%), Gaps = 18/196 (9%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVIFY 79 V+T+ I+ ++ V + G +A+++ +I L + Y+ +FRGTP+LVQ+ +I Sbjct: 18 VITMMISVVTIVFGTVFGVILALMK---RSSIAPLKWVASTYIAVFRGTPMLVQI-LIAN 73 Query: 80 GLPH---------IGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 GL H IG++ F I++L+LN AY++EI+R I ++ GQ++A+ + Sbjct: 74 GLFHQVVTLPPVTIGVLQIDFSRLFPGILALSLNSGAYVAEIVRGGINAVNSGQFEAARS 133 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ QT+R+II PQ + L +EFI ++K +S+ ST+ I E+ +AQ ++++++ Sbjct: 134 LGMNGTQTMRYIIFPQALRNILPSLGNEFIVLIKDSSLLSTLGIYELMNSAQIVITSSFI 193 Query: 188 PLIIYCELAFVYLILT 203 PL A +Y +T Sbjct: 194 PLKPLYVAAVLYFFMT 209 >gi|163791315|ref|ZP_02185728.1| Putative amino acid ABC transporter, substrate binding/permease subunit [Carnobacterium sp. AT7] gi|159873394|gb|EDP67485.1| Putative amino acid ABC transporter, substrate binding/permease subunit [Carnobacterium sp. AT7] Length = 493 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/185 (33%), Positives = 114/185 (61%), Gaps = 12/185 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I+ +S I+G ++ +R+ + I+ + YV RGTP+++Q+ I++ + + Sbjct: 299 TILISVVSVFFGSILGVVLSFMRMS-KNKIVHFVATAYVEFVRGTPMMIQVMFIYFAVGY 357 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + + + + II+++LN +AYI EIIRS + S+PKGQ +A+ ++G+++K +R II PQ Sbjct: 358 L-VNIPALASGIIAVSLNSAAYICEIIRSGLNSVPKGQSEAARSLGMSKKIAMRQIIFPQ 416 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPE-IFQTAQRIV-STTYQ---PLIIYCELAFV 198 + L +EFI+++K +S+ S I + + IFQT R+V S +Y+ PL++ + Sbjct: 417 ALKNIWPALGNEFITVIKESSIVSIIGVSDLIFQT--RVVTSVSYRGIAPLVVTM---II 471 Query: 199 YLILT 203 Y ILT Sbjct: 472 YFILT 476 >gi|15673779|ref|NP_267954.1| glutamate ABC transporter permease protein [Lactococcus lactis subsp. lactis Il1403] gi|281492390|ref|YP_003354370.1| polar amino acid ABC transporter permease [Lactococcus lactis subsp. lactis KF147] gi|12724822|gb|AAK05895.1|AE006409_5 glutamate ABC transporter permease protein [Lactococcus lactis subsp. lactis Il1403] gi|281376054|gb|ADA65545.1| Polar amino acid ABC transporter, permease protein [Lactococcus lactis subsp. lactis KF147] gi|326407285|gb|ADZ64356.1| polar amino acid ABC transporter, permease protein [Lactococcus lactis subsp. lactis CV56] Length = 228 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 112/196 (57%), Gaps = 15/196 (7%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVI 77 ++VT+ I+ +I ++G A+ +I I L + + Y+ IFRGTP+LVQ+ + Sbjct: 16 GMIVTILISAFVVLIGTLLGIVTALAKI---SKIAPLRWLANIYIEIFRGTPMLVQIMLG 72 Query: 78 F-----YGLP--HIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 F LP +GI+ + II ++LN AY++EI+R+ I ++P GQ +A+Y+ Sbjct: 73 FGLMGSLSLPTFQVGILQQDLGRLIPGIIVISLNSGAYMAEIVRAGIEAVPLGQKEAAYS 132 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ +Q + +ILPQ + + +EF++I+K +S+ TI + E+F AQ + + TYQ Sbjct: 133 LGIRPRQAMATVILPQALRNILPAVGNEFVTIIKDSSLLYTIGVMEVFNGAQTVANLTYQ 192 Query: 188 PLIIYCELAFVYLILT 203 + +A Y ++T Sbjct: 193 TISPMLFVALYYFVVT 208 >gi|149203651|ref|ZP_01880620.1| putative amino acid ABC transporter permease protein [Roseovarius sp. TM1035] gi|149142768|gb|EDM30810.1| putative amino acid ABC transporter permease protein [Roseovarius sp. TM1035] Length = 221 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 116/203 (57%), Gaps = 4/203 (1%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++W ++ PQ+L A+V T+ IA +S + + + + V R+ S +++ +V Sbjct: 6 FQW-KQALNRLPQMLDGALV-TMEIAILSMALGIALAILLTVFRLSGSRPLMAFATT-WV 62 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R TP L Q+++ +G+ GI F FV+I+I +T N + Y++E R ++ +IP Q Sbjct: 63 EIARNTPALFQIYMAHFGVASFGIHFSPFVSILIGITFNNAGYLTENFRGALKAIPDTQG 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI-PEIFQTAQRI 181 A ++GLT+ Q+ R+IILPQ + S +P++++ + + TS+ T+ + +++ Q + Sbjct: 123 RAGRSLGLTQLQSFRYIILPQMLRISFLPMTNQMVWAILMTSLGVTVGMNSDLYGVTQDL 182 Query: 182 VSTTYQPLIIYCELAFVYLILTS 204 + T++ ++ A ++ ++T Sbjct: 183 NALTFRTFELFALAAVIFYLITK 205 >gi|260462684|ref|ZP_05810890.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259031590|gb|EEW32860.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 314 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 114/209 (54%), Gaps = 19/209 (9%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY---- 79 TL + I V+++++G IA++R+ S ++ YVW FRG P L+QL F Sbjct: 78 TLMLTVIIMVLAIVVGTVIAIMRVSPSP-VLRAFAGVYVWFFRGVPALIQLIFWFNLSLL 136 Query: 80 ------GLPHIGIVF--------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 LP +G +F F + +++L+L + Y++EI+R+ I S+P GQ +A+ Sbjct: 137 VREISLTLPFLGTLFAVRTNDFMTPFFSAVVALSLCEAGYMAEIVRAGIKSVPSGQSEAA 196 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G+ + ++ I LPQ + P +E I++LK TS+ + I + ++F TAQ I + T Sbjct: 197 SALGMPYRMILKRITLPQAMRFVLPPTGNEAINLLKMTSLVTFIAVDDLFYTAQSIYART 256 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIE 214 ++ + + +AF YL + S + Q +E Sbjct: 257 FETIPLLIVVAFWYLAVVSIMSVGQHFLE 285 >gi|66046798|ref|YP_236639.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63257505|gb|AAY38601.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] gi|330897283|gb|EGH28702.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] gi|330953617|gb|EGH53877.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] gi|330972267|gb|EGH72333.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 232 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 115/207 (55%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N+I DS P L + ++ TL + IS L+ + ++R+ + +++ Y ++ Sbjct: 5 YNVIWDSLP-LYFGGLLTTLKLLAISLAFGLLAALPLGLMRVS-KNPWVNMPAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +SF+ ++ T+N SAY +EII S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFDAVRESFLWPWLSSATFCACLAFTINTSAYTAEIIAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G+++ + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + Y P Y YL LT Sbjct: 183 AARTVNAQFYLPFEAYITAGVFYLGLT 209 >gi|171741042|ref|ZP_02916849.1| hypothetical protein BIFDEN_00108 [Bifidobacterium dentium ATCC 27678] gi|171276656|gb|EDT44317.1| hypothetical protein BIFDEN_00108 [Bifidobacterium dentium ATCC 27678] Length = 235 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 102/190 (53%), Gaps = 30/190 (15%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-----PHIGI----------------VFD 89 + ++ + FY+W FRGTP+ QL +F+GL P IGI V Sbjct: 6 NPVLRGVSWFYIWFFRGTPVYTQL--VFWGLFAVLIPRIGIGIPFTSIEFWSVDSQSVIT 63 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 +F A + L LN +AY++EI+R+ + ++ GQ +A+ A+G+ R +R I+LPQ + Sbjct: 64 AFNAAWLGLVLNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRSLIMRRIVLPQAMRIII 123 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT-YQP---LIIYCELAFVYLILTSF 205 P +EFI +LK+TS+ + + Q A ++T Y+P LI+ C YL++TS Sbjct: 124 PPTGNEFIGMLKTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVAC---IWYLVITSI 180 Query: 206 CYIIQIKIES 215 IIQ ++E Sbjct: 181 LMIIQSRLEK 190 >gi|170734710|ref|YP_001773824.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169820748|gb|ACA95329.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 222 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 106/198 (53%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F I++ +P LL A ++L IA ++FV ++IG A I + + + ++ YV Sbjct: 5 FAPILEQWPYLL-AGAWLSLQIAMLAFVFGMLIGVVCASI-LHYGPASLRRVVAAYVMFA 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 TP LVQ+F +F+ LP +G+ F A++I T N AY+ EI R+ S+ + + +A+ Sbjct: 63 TNTPQLVQIFFLFFALPEVGVTLSPFSAVLIGATFNAGAYLCEIQRAGFASVRQAEIEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +G + Q +R++I P + PLS++FI + TS+AS + E+ + S T Sbjct: 123 EVLGFSTAQIVRYVIFPHVLKVMFPPLSNQFIMMTLGTSMASVFGVEELTGRTFNLSSQT 182 Query: 186 YQPLIIYCELAFVYLILT 203 Y + + A +Y+ +T Sbjct: 183 YLSIEAFSVAAVMYIAIT 200 >gi|46578523|ref|YP_009331.1| glutamine ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|120603894|ref|YP_968294.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris DP4] gi|46447934|gb|AAS94590.1| glutamine ABC transporter, permease protein [Desulfovibrio vulgaris str. Hildenborough] gi|120564123|gb|ABM29867.1| amino acid ABC transporter membrane protein, PAAT family [Desulfovibrio vulgaris DP4] gi|311232450|gb|ADP85304.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris RCH1] Length = 223 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 56/163 (34%), Positives = 96/163 (58%), Gaps = 3/163 (1%) Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ RGTPL+VQ+ +++G+P G+ A I+++ +N AYI+EI+R +I SI Sbjct: 60 YIEAIRGTPLIVQVMFLYFGVPLATGMRIPPETAGILAIAVNSGAYIAEIVRGAIASIDT 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A +IGLTR QT+ +II PQ PL ++FI LK TS+ I + E+ + Q Sbjct: 120 GQSEAGRSIGLTRLQTMLYIIWPQAFRRMIPPLGNQFIISLKDTSLLVVIGVGELTRQGQ 179 Query: 180 RIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQHT 221 I++ ++ ++ +A YL +T S + ++ ++E S + + Sbjct: 180 EIIAVNFRAFEVWLTVAVFYLAMTLSIAWALR-RLERSFSARS 221 >gi|194432940|ref|ZP_03065224.1| histidine ABC transporter, permease protein HisM [Shigella dysenteriae 1012] gi|194418928|gb|EDX35013.1| histidine ABC transporter, permease protein HisM [Shigella dysenteriae 1012] gi|332090068|gb|EGI95167.1| histidine transport system permease protein hisM [Shigella dysenteriae 155-74] Length = 238 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 115/213 (53%), Gaps = 11/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + +S VI ++ F+A+ R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLILSVVIGGVLALFLAIGRVS-SNKYIQFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTEFLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+ ++ + A+ I + TYQ Sbjct: 139 YGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVSDLLKIARDINAATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P + A +YLI++ + + E QH Sbjct: 199 PFTAFGIAAVLYLIISYVLISLFRRAEKRWLQH 231 >gi|330879703|gb|EGH13852.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 232 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 113/207 (54%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N+I DS P L + ++ TL + IS L+ + ++R+ + +++ Y ++ Sbjct: 5 YNVICDSLP-LYFGGLLTTLKLLAISLAFGLLAALPLGLMRVS-KNPWVNMPAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +SF ++ +N SAY +EII S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFAAVRESFFWPWLSSATFCACLAFAINTSAYTAEIIAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G+++ + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + Y P Y YL LT Sbjct: 183 AARTVNAQFYLPFEAYVTAGVFYLCLT 209 >gi|307352566|ref|YP_003893617.1| polar amino acid ABC transporter inner membrane subunit [Methanoplanus petrolearius DSM 11571] gi|307155799|gb|ADN35179.1| polar amino acid ABC transporter, inner membrane subunit [Methanoplanus petrolearius DSM 11571] Length = 236 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 116/205 (56%), Gaps = 11/205 (5%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF-----FSDTIISLIMHFY 61 +++ID P LL I VTL + + +IIG +A+ +++ + D I+ + + Sbjct: 5 SILIDWAPYLL-TGIFVTLGLTAAGLGLGVIIGLPMAIGQVYSTGIRWVDKIMKAFIAVF 63 Query: 62 VWIFRGTPLLVQLFVIFYG---LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 VW FRG P+LV LF+ ++G L +G + FV I+ L L +AY S+I R +I SI Sbjct: 64 VWFFRGLPILVLLFLFYFGIFPLMGMGDLAPFFVGAIV-LGLRGAAYQSQIFRGAIQSIS 122 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ A+ ++G+T+ I+++ILPQ+ + S+E+ +IL ++V I + E+ + Sbjct: 123 EGQMTAARSLGMTKLSAIKNVILPQSFRIALPGWSNEYPNILTDSAVCYAIGVAELLTRS 182 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT 203 +I S TY+ IY A +++IL Sbjct: 183 SQIASQTYE-YTIYLVCAVLFIILN 206 >gi|228983609|ref|ZP_04143813.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228776094|gb|EEM24456.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 225 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/183 (33%), Positives = 106/183 (57%), Gaps = 3/183 (1%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + ++P LL A IV + SLI F A RI ++ +++ I H Y+ I RGTP Sbjct: 1 MSTYPTLLKATIVTLQLTLTSLLLGSLIGLLF-AFFRIS-NNKVLNSIAHVYIAIIRGTP 58 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 L+VQ+ ++++G+ + +VF F A I+L ++ AYI+EI R SI S+ +GQ +A+ ++G Sbjct: 59 LIVQIAILYFGITSV-VVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAARSLG 117 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 + +R I+LPQ S PL ++FI LK +S+ + + + E++ + I + +Q L Sbjct: 118 MPYPLAMRRIVLPQAFRQSIPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQL 177 Query: 190 IIY 192 Y Sbjct: 178 DTY 180 >gi|317486285|ref|ZP_07945117.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] gi|316922455|gb|EFV43709.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] Length = 233 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 53/145 (36%), Positives = 88/145 (60%), Gaps = 1/145 (0%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y+ RGTPL+VQ+ +++GLP +G+ VA +I++ +N AYI+EI+R +I SI Sbjct: 59 LYIEAIRGTPLIVQVMFLYFGLPLALGMRIPPDVAGVIAIGVNSGAYIAEIVRGAIQSID 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A + GLT+ QT+ +II PQ PL+++ I LK TS+ I + E+ + Sbjct: 119 KGQTEAGRSTGLTQAQTMLYIIWPQAFRRMIPPLTNQCIISLKDTSLLVVIGVGELTRQG 178 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT 203 Q I++ ++ ++ +A YL +T Sbjct: 179 QEIIAVNFRAFEVWLTVAIFYLAMT 203 >gi|229542708|ref|ZP_04431768.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus coagulans 36D1] gi|229327128|gb|EEN92803.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus coagulans 36D1] Length = 219 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 114/202 (56%), Gaps = 6/202 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I VTL + + ++G A+ +I T+ I Y IFRGTPL+VQL +I++ Sbjct: 18 GIWVTLKFVFFAILFGFVLGTIFALFKISHIKTL-KWIGDIYTSIFRGTPLIVQLMLIYF 76 Query: 80 GLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 +P + G F + I++ LN +AY+SEIIR+ I ++ KGQ +A+ A+G+ ++ Sbjct: 77 AIPQLTGYDIQPFPSAILAFGLNSAAYVSEIIRAGIQAVDKGQTEAAQALGVPYYLMMKD 136 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY---QPLIIYCEL 195 +ILPQ + L +EF+S+ K +++ STI ++ + AQ + + TY +PL+ + Sbjct: 137 LILPQAMKNILPALMNEFVSLTKESALVSTIGYLDLMRRAQVVGAQTYHNFEPLLFVAAI 196 Query: 196 AFVYL-ILTSFCYIIQIKIESS 216 +V + ILT ++ K++ S Sbjct: 197 YWVLVFILTMLGKQVERKMKYS 218 >gi|332528310|ref|ZP_08404310.1| amino acid ABC transporter permease [Hylemonella gracilis ATCC 19624] gi|332042181|gb|EGI78507.1| amino acid ABC transporter permease [Hylemonella gracilis ATCC 19624] Length = 226 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 87/149 (58%), Gaps = 1/149 (0%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 ++SL++ Y + R P L+ L V+++G P IG+ +F ++L+L +AY E I + Sbjct: 60 VLSLVVVAYADVMRSLPPLILLIVVYFGFPSIGLPLSAFATTWLALSLVLAAYAEESIWA 119 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I+S+P GQ +A+ + GL+ Q +R ++LPQ + S PL++ ISI K+T++ S + + Sbjct: 120 GIVSLPDGQMEAARSTGLSWWQAMRWVVLPQALRRSVPPLTNRVISITKNTALGSVVALS 179 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 EI AQ ST+ P + A YL+ Sbjct: 180 EILNQAQAASSTSGNPTPLTLG-ALAYLV 207 >gi|257869446|ref|ZP_05649099.1| amino acid ABC transporter [Enterococcus gallinarum EG2] gi|257803610|gb|EEV32432.1| amino acid ABC transporter [Enterococcus gallinarum EG2] Length = 215 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/176 (33%), Positives = 98/176 (55%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + ++ SL+IG +A+ ++ ++ + I YV FR PLL+ + + +P + Sbjct: 23 SLLALFFSLVIGTLMAIFQLS-TNRWVKGIAKAYVEFFRNIPLLIIVMFFYVVVPMYWVT 81 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 FD F A I LT+ SA+I+E IRS I ++PKGQ +AS + G T Q +R+IILPQ Sbjct: 82 FDGFQAGTIGLTIYTSAFIAETIRSGIQTVPKGQMEASLSSGFTYSQAMRYIILPQAFKI 141 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++FI+++K++S+ + + +I I S T+ Y + YLI+T Sbjct: 142 VVPPLGNQFINLVKNSSILAMVAGLDIMYQGDLIASETFNTFDTYIIVGIFYLIIT 197 >gi|167034984|ref|YP_001670215.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166861472|gb|ABY99879.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 232 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 115/207 (55%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N++ ++ P L + ++ TL + IS L+ + ++R+ +++L Y ++ Sbjct: 5 YNVVWEALP-LYFGGLLTTLKLLAISLFFGLLAAIPLGLMRVS-KQPVVNLAAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDS-FVAIIISLT--------LNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +S F ++ S T +N SAY +EII S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFEAVRESIFWPLLSSATFCACLAFGINTSAYTAEIIAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G++R + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + Y P Y YL LT Sbjct: 183 AARTVNAQYYLPFEAYITAGVFYLCLT 209 >gi|168482935|ref|ZP_02707887.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC1873-00] gi|172043646|gb|EDT51692.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC1873-00] gi|332202579|gb|EGJ16648.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA41317] gi|332203868|gb|EGJ17935.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA47368] Length = 226 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 104/194 (53%), Gaps = 1/194 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A +TL IA + S ++G +++IR + +++ + Y+ + R T Sbjct: 5 IVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIR-HYRIPVLAQVATAYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IGIV S V + L +Y++E RS + +I + Q + AI Sbjct: 64 PLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q R+++LPQ S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 124 GLTPLQVFRYVVLPQATAVELPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183 Query: 189 LIIYCELAFVYLIL 202 I L YLI+ Sbjct: 184 DIALAMLVVAYLIM 197 >gi|13474097|ref|NP_105665.1| amino acid ABC transporter, permease protein [Mesorhizobium loti MAFF303099] gi|14024849|dbj|BAB51451.1| amino acid ABC transporter, permease protein [Mesorhizobium loti MAFF303099] Length = 218 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/144 (34%), Positives = 87/144 (60%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +YV + R TP LVQLF IF+GLP +GI D +A ++++TLN +AY EI+ + + ++P Sbjct: 55 WYVEVMRNTPFLVQLFFIFFGLPSLGIRLDPILAAMLAMTLNMAAYTIEIVGAGLDAVPG 114 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ A+GL +Q I+LPQ + L+S+ + ++ ++V S I + E+ A Sbjct: 115 GQTEAALALGLRPRQVFIKIVLPQALKIIYPALTSQIVIMMLESAVVSQIAVRELTYEAD 174 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 + + T++ Y + VYL ++ Sbjct: 175 MLQARTFRSFETYFVVTLVYLAMS 198 >gi|257878165|ref|ZP_05657818.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257881051|ref|ZP_05660704.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|257884712|ref|ZP_05664365.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257889636|ref|ZP_05669289.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|257892424|ref|ZP_05672077.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] gi|260559212|ref|ZP_05831398.1| amino acid ABC transporter [Enterococcus faecium C68] gi|261207745|ref|ZP_05922430.1| amino acid ABC transporter [Enterococcus faecium TC 6] gi|289565820|ref|ZP_06446262.1| glutamine ABC transporter permease glnP [Enterococcus faecium D344SRF] gi|293563128|ref|ZP_06677593.1| glutamate/aspartate transport system permease protein GltK [Enterococcus faecium E1162] gi|294614006|ref|ZP_06693936.1| glutamate/aspartate transport system permease protein GltK [Enterococcus faecium E1636] gi|294617099|ref|ZP_06696765.1| glutamate/aspartate transport system permease protein GltK [Enterococcus faecium E1679] gi|294623310|ref|ZP_06702172.1| glutamate/aspartate transport system permease protein GltK [Enterococcus faecium U0317] gi|314939891|ref|ZP_07847097.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|314943738|ref|ZP_07850477.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|314949694|ref|ZP_07853012.1| ABC transporter, permease protein [Enterococcus faecium TX0082] gi|314953240|ref|ZP_07856179.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|314993680|ref|ZP_07859028.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|314997403|ref|ZP_07862354.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|257812393|gb|EEV41151.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257816709|gb|EEV44037.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|257820550|gb|EEV47698.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257825996|gb|EEV52622.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|257828803|gb|EEV55410.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] gi|260074969|gb|EEW63285.1| amino acid ABC transporter [Enterococcus faecium C68] gi|260078128|gb|EEW65834.1| amino acid ABC transporter [Enterococcus faecium TC 6] gi|289162363|gb|EFD10221.1| glutamine ABC transporter permease glnP [Enterococcus faecium D344SRF] gi|291593113|gb|EFF24692.1| glutamate/aspartate transport system permease protein GltK [Enterococcus faecium E1636] gi|291596636|gb|EFF27863.1| glutamate/aspartate transport system permease protein GltK [Enterococcus faecium E1679] gi|291597278|gb|EFF28467.1| glutamate/aspartate transport system permease protein GltK [Enterococcus faecium U0317] gi|291604906|gb|EFF34375.1| glutamate/aspartate transport system permease protein GltK [Enterococcus faecium E1162] gi|313588538|gb|EFR67383.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|313591854|gb|EFR70699.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|313594706|gb|EFR73551.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|313597601|gb|EFR76446.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|313640854|gb|EFS05434.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|313643952|gb|EFS08532.1| ABC transporter, permease protein [Enterococcus faecium TX0082] Length = 218 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 101/177 (57%), Gaps = 7/177 (3%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W N+ + L + VT+ ++ S + S +IG VIR F + S I+ + Sbjct: 7 FSWMNI------RFLLEGLKVTVEVSLFSIIFSFLIGGLTGVIR-FANIPFFSKILGVVI 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R PLL+ +F ++ LP IGI + F + + +LT+ SA +SEI R+ + ++PKGQ Sbjct: 60 DIIRNLPLLLIIFFTYFALPQIGIQMNIFWSAVAALTIFESAMLSEIFRAGLNAVPKGQM 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +A + GLT +++R I+LPQ + + S+ IS++K TS+A I++PE+ A+ Sbjct: 120 EAGLSTGLTYVESMRTIVLPQAFKSMIPAIVSQLISLIKDTSLAVIISLPELSHQAR 176 >gi|238749314|ref|ZP_04610819.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia rohdei ATCC 43380] gi|238711969|gb|EEQ04182.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia rohdei ATCC 43380] Length = 240 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 19/209 (9%) Query: 14 PQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIF---FSDTIISLIMHFYVWIFRGT 68 P LY + + L + F++S+ G +A+I F ++ ++ + FR T Sbjct: 11 PTFLYSDGSEITGLAMTAKLFLLSVFPGLLLALIMAVGQAFGPRPLAWLIRSVTYFFRST 70 Query: 69 PLLVQLFVIFYGLPHIGIV--------------FDSFVAIIISLTLNFSAYISEIIRSSI 114 PL +QL +I+YGL IV D+ +++L LN SAY++E++ + Sbjct: 71 PLYLQLMLIYYGLSQFEIVQLGWQDDQPFWLLFRDATFCAVLALVLNTSAYVAELLAGMM 130 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ P+ +W A A G+T+ Q IR ++LP T+ L++E + +L +TS+AST+T+ +I Sbjct: 131 VTFPRQEWVAGEAFGMTQWQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTVTLLDI 190 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + TY P I + A +YL+ T Sbjct: 191 TGVARAFYAATYSPFIPFLMAAALYLLCT 219 >gi|327534749|gb|AEA93583.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis OG1RF] Length = 237 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 10/225 (4%) Query: 3 YEWFNLIIDS--FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 Y W L D F Q I+++L ++F + + G A ++ I Sbjct: 18 YRWEALFQDWRIFGQAFLYTILLSLGAILVAFTLGIFFGSLSAT-----KSKLLHAISRV 72 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIG--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV F+ TPLL+Q V++YG P + + F I+ + L AYISE++RS I ++P Sbjct: 73 YVEFFQNTPLLIQFIVVYYGFPLLNPLLSFSITTIAILCVGLYHGAYISEVVRSGIGAVP 132 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ++A+Y+ GLT QT+R++ILPQ PL+++ ++++K+TS + I+ ++ A Sbjct: 133 RGQFEAAYSQGLTYGQTMRYVILPQAWRIMLPPLTNQVVNLIKNTSTVAIISGADVMFAA 192 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 S + + F+Y IL + K+E + YS Sbjct: 193 NSWSSVNLNYIPAFALAGFLYFILCFPLANLARKMEEK-NKKAYS 236 >gi|89897436|ref|YP_520923.1| hypothetical protein DSY4690 [Desulfitobacterium hafniense Y51] gi|89336884|dbj|BAE86479.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 236 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 102/187 (54%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M W I+ + P L A +TL +A + SL++G +VI +++ ++ IM Sbjct: 16 MNLNW-EFILQNIP-LYEKAAWLTLKLAFWGTLFSLLLGLICSVI-MYYRIPLLKTIMGG 72 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLL+Q++ +++GLP +G+ I+ L+ +Y++E +R + ++ K Sbjct: 73 YIELSRNTPLLIQVYFLYFGLPKLGVTLSETACAILGLSFLGGSYMAEALRGGMEAVSKS 132 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q ++ ++GL+R Q IR+++ PQ + S L + I +LK TSV I I ++ + Sbjct: 133 QLESGLSLGLSRWQLIRYVVFPQAFSFSIPALGANCIFLLKETSVLGAIAILDLMNVTKD 192 Query: 181 IVSTTYQ 187 ++ YQ Sbjct: 193 LIGMYYQ 199 >gi|168180075|ref|ZP_02614739.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum NCTC 2916] gi|226948680|ref|YP_002803771.1| amino acid ABC transporter permease [Clostridium botulinum A2 str. Kyoto] gi|182668898|gb|EDT80874.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum NCTC 2916] gi|226841764|gb|ACO84430.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A2 str. Kyoto] Length = 221 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 84/132 (63%), Gaps = 7/132 (5%) Query: 62 VWI--FRGTPLLVQLFVIFYGL----PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 +W+ FRGTPL+ QLF +++G+ P + + D+ A II L N SAY+SE +R +I Sbjct: 57 IWVSFFRGTPLIAQLFFLYFGIVQLVPSLKNM-DAMTAAIIGLGFNASAYMSETLRGAIS 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ KGQ +AS +IG+T Q+++ I+ PQ + LS+ F+ I+K +++A T+ + EI Sbjct: 116 SVDKGQIEASLSIGMTSIQSMKRIVFPQAARVALPALSNSFVDIIKGSALAFTLGVVEIM 175 Query: 176 QTAQRIVSTTYQ 187 AQ +++Y+ Sbjct: 176 AVAQSEGASSYR 187 >gi|218680555|ref|ZP_03528452.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 894] Length = 120 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 47/119 (39%), Positives = 78/119 (65%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 ++ + R TP LVQLF IF+GLP +G+ F A I +LT+N +AYI+E++R + +P G Sbjct: 2 FIEVIRNTPFLVQLFFIFFGLPSLGLKFSVSFAAIAALTVNTAAYIAEVLRGGVDGLPYG 61 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q +A A+GL R+Q IIL ++ LS++F+ ++ ++SV ++I+ PE+ +AQ Sbjct: 62 QIEAGKALGLNRRQIFFDIILKPSVRAVYPGLSAQFVLLMLTSSVVASISAPELTYSAQ 120 >gi|262043352|ref|ZP_06016480.1| histidine transport system permease HisM [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039304|gb|EEW40447.1| histidine transport system permease HisM [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 238 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 114/213 (53%), Gaps = 11/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S V+ I+ F+A+ R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLISSVVMGGILAVFLAIGRVS-SNKFIQFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+ G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTELLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVAAGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSSVKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P + A +YLI++ + K E QH Sbjct: 199 PFTAFGIAAVLYLIISYVLISLFRKAEKRWLQH 231 >gi|261339172|ref|ZP_05967030.1| hypothetical protein ENTCAN_05396 [Enterobacter cancerogenus ATCC 35316] gi|288319017|gb|EFC57955.1| arginine ABC transporter, permease protein ArtM [Enterobacter cancerogenus ATCC 35316] Length = 222 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 121/216 (56%), Gaps = 14/216 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D P+L+ + +L + S V++LI+ +I + ++ I+ Y+ +F GT Sbjct: 1 MLDYLPELM-KGLHTSLTLTVASIVVALILALIFTII-LTLKTPVLVWIVRAYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPSLQEYPVIWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW + A+G+++K T+ I+LP + S+E + + KSTS+A TIT+ E+ Sbjct: 119 EGQWQSCGALGMSKKDTL-AILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Q + TY ++++ VYL++ ++ IE Sbjct: 178 QLLYGRTYD-VMVFGAAGLVYLVVNGLLTLMMRLIE 212 >gi|15889180|ref|NP_354861.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15156999|gb|AAK87646.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 276 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 116/211 (54%), Gaps = 12/211 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++ T+ + S ++ I+ IA R+ + II + YV++FR TPLL QLF+I+Y Sbjct: 65 GLITTITLVGSSIILGAILSVPIAFARMS-ENRIIGAFAYAYVYVFRSTPLLAQLFLIYY 123 Query: 80 GL----PHIGIV------FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 GL P + V +++ ++SLTLN +AY +EI+R +I S+P+GQ + + ++G Sbjct: 124 GLGSFRPALEAVDLWWFFREAWYCGLLSLTLNTAAYQAEILRGAIRSVPRGQHEGAASLG 183 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 +++ T R +ILPQ + + P +E I ++K ++V S +T+ ++ + S T+ Sbjct: 184 ISKFITFRKVILPQALIVALRPYGNEIILMIKGSAVVSIVTVFDLMGQTRYAFSRTFD-Y 242 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y A YL + I +E+ +T+H Sbjct: 243 QAYLWAAIFYLTIVETLRHIWAWLEARLTRH 273 >gi|121608290|ref|YP_996097.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121552930|gb|ABM57079.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 512 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/195 (34%), Positives = 110/195 (56%), Gaps = 10/195 (5%) Query: 21 IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG 80 +VV L IA ++ + L+ GF +A+ + S ++ + Y+W FR PLLV L V Y Sbjct: 23 VVVELSIA--TWCMGLVAGFGLALGKQSGS-PVLRRLAGLYIWFFRSLPLLV-LLVFTYN 78 Query: 81 LPHI----GIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 LP + G++ D F A + +L ++ +A+I+EI R I+ +P GQ +A A+G+ R Sbjct: 79 LPQVFPASGVLLSDPFYAGLTALVVSETAFIAEIHRGGILGVPPGQIEAGRALGIGRAGI 138 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 R I++PQ + + LS+EFI+I K TS+ S I++ EI QR+ + + + Sbjct: 139 QRMIVIPQALRIALPALSNEFITIAKMTSLVSVISLAEILLVGQRLYTQNFLVFETMLAV 198 Query: 196 AFVY-LILTSFCYII 209 AF Y LI+T F ++ Sbjct: 199 AFYYVLIVTVFDKLL 213 >gi|257451921|ref|ZP_05617220.1| amino acid ABC transporter permease [Fusobacterium sp. 3_1_5R] gi|317058472|ref|ZP_07922957.1| amino acid ABC transporter permease [Fusobacterium sp. 3_1_5R] gi|313684148|gb|EFS20983.1| amino acid ABC transporter permease [Fusobacterium sp. 3_1_5R] Length = 224 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 100/170 (58%), Gaps = 3/170 (1%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII--ISLTLNFSAYIS 107 + I+S I Y+ I RGTP +VQL +I + +G + ++ + I+ I+ +N AY++ Sbjct: 52 NSKILSKIALVYIDIVRGTPAVVQL-MILANIIFVGALRETPILIVAGIAFGMNSGAYVA 110 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 EIIR+ I + KGQ +A A+GL+ QT++ +I+PQ + L SEFI++LK TS+ Sbjct: 111 EIIRAGIEGLEKGQTEAGRALGLSYAQTMKFVIIPQAVKKILPALVSEFITLLKETSIVG 170 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 I ++ ++A I S TY+ + + +YLILT+ I+ K+E + Sbjct: 171 FIGGVDLLRSANIITSQTYRGVEPLLAVGIIYLILTTVFTILMRKVEKGL 220 >gi|291457061|ref|ZP_06596451.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Bifidobacterium breve DSM 20213] gi|291380896|gb|EFE88414.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Bifidobacterium breve DSM 20213] Length = 262 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 18/214 (8%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 + YE+ I + L A I +TL ++ + ++ G FI ++RI ++ +I F Sbjct: 3 LDYEFMGQDIPVLLRALPATITLTLWSMLVALLFAVACGAFI-LVRIPVLKQLVIVINTF 61 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV-------------AIIISLTLNFSAYIS 107 +G PL++QL +Y +P + D F+ A +++L LNF AYI+ Sbjct: 62 ----IKGVPLVIQLLFCYYAVPIVAKGLDGFLGYHFDPRNPPYFPAAVLALGLNFGAYIT 117 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 +++ SS+ +I GQ +A A G+ R++ I HI+LPQ + S + + FI +LK TSVAS Sbjct: 118 DVVVSSVRAIDHGQIEAGKACGMRRREIIWHILLPQVVVVSIPDMGNYFIWLLKGTSVAS 177 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 + + E+ TA+ S Y L Y A +Y + Sbjct: 178 LVGVAELLGTAKISASQNYDFLEAYLVAALLYWV 211 >gi|225858526|ref|YP_002740036.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae 70585] gi|225720933|gb|ACO16787.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae 70585] Length = 226 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 105/194 (54%), Gaps = 1/194 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A +TL IA + S ++G +++IR + +++ + Y+ + R T Sbjct: 5 IVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIR-HYRIPVLAQVATAYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IGIV S V + L +Y++E RS + +I + Q + AI Sbjct: 64 PLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q R+++LPQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183 Query: 189 LIIYCELAFVYLIL 202 I L YLI+ Sbjct: 184 DIALAMLVVAYLII 197 >gi|224368641|ref|YP_002603090.1| ABC-type amino acid transporter, permease component [Desulfobacterium autotrophicum HRM2] gi|223691357|gb|ACN14640.1| ABC-type amino acid transporter, permease component [Desulfobacterium autotrophicum HRM2] Length = 226 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 14/201 (6%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF----- 60 F +I++ P L+ + T I+ S ++L++G RI S I + Sbjct: 11 FRIIMEYLPLFLHG-LGATFLISTASIFLALVVGVIACACRI-------SQIKYLKYPAI 62 Query: 61 -YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQ++ ++GLP +G+ I++L LN AYI+EIIR+ I S+ + Sbjct: 63 AYIELIRSTPLLVQIYFFYFGLPTLGVRIPEIQTGILALMLNSGAYIAEIIRAGISSVDE 122 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G +A + GL Q +R IILPQ + + PL + I ++K +++ S I++ E+ + Q Sbjct: 123 GHIEAGISSGLNYVQRMRFIILPQALGATIPPLLGQAIVLVKDSALLSLISVAELTRCGQ 182 Query: 180 RIVSTTYQPLIIYCELAFVYL 200 + S + P + +AF Y+ Sbjct: 183 VLTSERFMPTEAFLTVAFFYM 203 >gi|15967001|ref|NP_387354.1| putative amino-acid transport system permease ABC transporter protein [Sinorhizobium meliloti 1021] gi|307302469|ref|ZP_07582226.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|307316201|ref|ZP_07595645.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|15076274|emb|CAC47827.1| Putative amino-acid transport system permease ABC transporter [Sinorhizobium meliloti 1021] gi|306898041|gb|EFN28783.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306903139|gb|EFN33729.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 273 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 112/204 (54%), Gaps = 25/204 (12%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI-FYGL 81 VT+ + + FV++ ++G +A++ + ++ I FY + RG P+LV LF I F G Sbjct: 52 VTVFVTLVGFVLATVLGLGVALMALS-EHVVLRQIARFYTEVIRGVPILVLLFYIAFVGA 110 Query: 82 PHIGIVFDSFVAI----------------------IISLTLNFSAYISEIIRSSIISIPK 119 P + + +FVA I++L + +SA+I+E+ R+ I S+ K Sbjct: 111 PAL-VTVANFVAAPLISAGWIEPFVVRDVSLMWRAIMALMIGYSAFIAEVFRAGIQSVDK 169 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ A+GL+R Q R ++ PQ I PL ++F++++K +S+ S + + +I Q + Sbjct: 170 GQVEAAKALGLSRYQRFRLVVFPQAIRVILPPLGNDFVAMVKDSSLVSVLGVADITQMGK 229 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 S +++ Y +A+VYL+LT Sbjct: 230 VYASGSFRFFETYSIVAYVYLVLT 253 >gi|22124841|ref|NP_668264.1| inner membrane ABC transporter permease [Yersinia pestis KIM 10] gi|45440528|ref|NP_992067.1| putative amino acid ABC transporter permease [Yersinia pestis biovar Microtus str. 91001] gi|51595217|ref|YP_069408.1| amino acid ABC transporter, permease protein [Yersinia pseudotuberculosis IP 32953] gi|108808738|ref|YP_652654.1| putative amino acid ABC transporter permease [Yersinia pestis Antiqua] gi|108811005|ref|YP_646772.1| amino acid ABC transporter, permease protein [Yersinia pestis Nepal516] gi|145600151|ref|YP_001164227.1| amino acid ABC transporter, permease protein [Yersinia pestis Pestoides F] gi|149364903|ref|ZP_01886938.1| putative amino acid ABC transporter, permease protein [Yersinia pestis CA88-4125] gi|153947455|ref|YP_001402149.1| amino acid ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|162419614|ref|YP_001607784.1| amino acid ABC transporter permease [Yersinia pestis Angola] gi|165926646|ref|ZP_02222478.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165936022|ref|ZP_02224592.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|166011080|ref|ZP_02231978.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166212889|ref|ZP_02238924.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167399264|ref|ZP_02304788.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421700|ref|ZP_02313453.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423711|ref|ZP_02315464.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468795|ref|ZP_02333499.1| amino acid ABC transporter, permease protein [Yersinia pestis FV-1] gi|170025545|ref|YP_001722050.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186894234|ref|YP_001871346.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|218930281|ref|YP_002348156.1| putative amino acid ABC transporter permease [Yersinia pestis CO92] gi|229838867|ref|ZP_04459026.1| putative amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896360|ref|ZP_04511529.1| putative amino acid ABC transporter, permease protein [Yersinia pestis Pestoides A] gi|229899436|ref|ZP_04514579.1| putative amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901224|ref|ZP_04516346.1| putative amino acid ABC transporter, permease protein [Yersinia pestis Nepal516] gi|270489412|ref|ZP_06206486.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294504972|ref|YP_003569034.1| putative amino acid ABC transporter, permease protein [Yersinia pestis Z176003] gi|21957670|gb|AAM84515.1|AE013696_8 putative inner membrane permease of ABC transporter [Yersinia pestis KIM 10] gi|45435385|gb|AAS60944.1| putative amino acid ABC transporter, permease protein [Yersinia pestis biovar Microtus str. 91001] gi|51588499|emb|CAH20107.1| putative amino acid ABC transporter, permease protein [Yersinia pseudotuberculosis IP 32953] gi|108774653|gb|ABG17172.1| amino acid ABC transporter, permease protein [Yersinia pestis Nepal516] gi|108780651|gb|ABG14709.1| putative amino acid ABC transporter, permease protein [Yersinia pestis Antiqua] gi|115348892|emb|CAL21849.1| putative amino acid ABC transporter, permease protein [Yersinia pestis CO92] gi|145211847|gb|ABP41254.1| amino acid ABC transporter, permease protein [Yersinia pestis Pestoides F] gi|149291316|gb|EDM41390.1| putative amino acid ABC transporter, permease protein [Yersinia pestis CA88-4125] gi|152958950|gb|ABS46411.1| amino acid ABC transporter, permease protein [Yersinia pseudotuberculosis IP 31758] gi|162352429|gb|ABX86377.1| amino acid ABC transporter, permease protein [Yersinia pestis Angola] gi|165916167|gb|EDR34774.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|165921574|gb|EDR38771.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165990080|gb|EDR42381.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205676|gb|EDR50156.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960619|gb|EDR56640.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051768|gb|EDR63176.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057881|gb|EDR67627.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752079|gb|ACA69597.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186697260|gb|ACC87889.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|229681153|gb|EEO77247.1| putative amino acid ABC transporter, permease protein [Yersinia pestis Nepal516] gi|229687838|gb|EEO79911.1| putative amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695233|gb|EEO85280.1| putative amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700636|gb|EEO88666.1| putative amino acid ABC transporter, permease protein [Yersinia pestis Pestoides A] gi|262363036|gb|ACY59757.1| putative amino acid ABC transporter, permease protein [Yersinia pestis D106004] gi|262366960|gb|ACY63517.1| putative amino acid ABC transporter, permease protein [Yersinia pestis D182038] gi|270337916|gb|EFA48693.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294355431|gb|ADE65772.1| putative amino acid ABC transporter, permease protein [Yersinia pestis Z176003] gi|320016445|gb|ADW00017.1| putative amino acid ABC transporter, permease protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 222 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 100/174 (57%), Gaps = 2/174 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P+LL + ++ T+ + ++ + + +G A IR + I+ + YV I R TP +V Sbjct: 14 LPELL-SGLLTTIELTVMATIGGIALGICGAAIRCG-NTVILRRLWGGYVEIVRNTPFVV 71 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QLF I +GLP +G+ + A ++++T+N AY +EIIRS I + KGQW+A+ +GL+R Sbjct: 72 QLFFIVFGLPALGLKLSAGQAALLAMTINLGAYSTEIIRSGIQASAKGQWEAARVLGLSR 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 QT +ILP ++ L S+ I ++ ++V S ++ E+ A I S T+ Sbjct: 132 SQTFFRVILPPSLQRIYPALVSQCIIVMLGSAVVSQVSFEELTFAANLIQSRTF 185 >gi|227873564|ref|ZP_03991806.1| ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] gi|227840588|gb|EEJ50976.1| ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] Length = 217 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 114/198 (57%), Gaps = 6/198 (3%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL IA + + SL+IG ++I +++ ++ YV + R TPLLVQLF +++GLP Sbjct: 19 LTLGIAFLGILFSLLIGLAASLI-LYYKIPFWRRVVQVYVELSRNTPLLVQLFFLYFGLP 77 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 +GI F S + +I L+ AY++E RS + ++ K Q +++ ++GL++ Q +R++I P Sbjct: 78 KLGIRFSSELCGVIGLSFLGGAYMTEAFRSGLSTVQKIQKESAQSLGLSKGQIMRYVIFP 137 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q ++ S + + I ++K TSV S I + ++ ++ ++ Y+ E A + L++ Sbjct: 138 QALSVSIPAIVANMIFLIKETSVFSGIALADLMYVSKDLIGLYYK-----TEEALLMLVI 192 Query: 203 TSFCYIIQIKIESSVTQH 220 + ++ + I +V + Sbjct: 193 SYLIMLLPLSILGNVLER 210 >gi|153941265|ref|YP_001390764.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum F str. Langeland] gi|152937161|gb|ABS42659.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum F str. Langeland] gi|295318836|gb|ADF99213.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum F str. 230613] Length = 221 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 84/132 (63%), Gaps = 7/132 (5%) Query: 62 VWI--FRGTPLLVQLFVIFYG----LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 +W+ FRGTPL+ QLF +++G +P + + D+ A II L N SAY+SE +R +I Sbjct: 57 IWVSFFRGTPLIAQLFFLYFGIVQLMPSLKNM-DAMTAAIIGLGFNASAYMSETLRGAIS 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ KGQ +AS +IG+T Q+++ I+ PQ + LS+ F+ I+K +++A T+ + EI Sbjct: 116 SVDKGQIEASLSIGMTPIQSMKRIVFPQAARVALPALSNSFVDIIKGSALAFTLGVVEIM 175 Query: 176 QTAQRIVSTTYQ 187 AQ +++Y+ Sbjct: 176 AVAQSEGASSYR 187 >gi|229159721|ref|ZP_04287730.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus R309803] gi|228623746|gb|EEK80563.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus R309803] Length = 218 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + ++ + S I+G +AV+RI +++ I +V R PL++ F+ ++ LP IGI Sbjct: 25 SVLALIGSFILGVILAVMRIA-PIRVLNWIGSAFVEFVRNIPLVLIAFIFYFALPVIGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + +++LPQ + Sbjct: 84 LNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYVQAMYYVVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|328470444|gb|EGF41355.1| arginine transporter permease subunit ArtM [Vibrio parahaemolyticus 10329] Length = 222 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 91/163 (55%), Gaps = 10/163 (6%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSI 114 +F GTPLLVQ+F+++YG V +S + +++L LN +AY +++ + + Sbjct: 55 LFTGTPLLVQIFLVYYGPGQFDAVRESVLWTWLSQPWFCAMLALALNTAAYSTQLFKGAF 114 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IP GQW A A+G+ + T+R ++LP I + S+E I + K TS+ASTITI ++ Sbjct: 115 NAIPSGQWQACRALGMNKSATLR-VLLPYAIRRAVPAYSNEVILVFKGTSLASTITIMDL 173 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 AQRI + TY L+++ YL + +I ++E Sbjct: 174 MGYAQRINAQTYDTLMVFGVAGAFYLSVNGILTLIFRQVEKKA 216 >gi|160880804|ref|YP_001559772.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium phytofermentans ISDg] gi|160429470|gb|ABX43033.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium phytofermentans ISDg] Length = 226 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 97/168 (57%), Gaps = 1/168 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A +T+ I+ I V++++IG ++I+ + SL+ + Y+ I R TPLL+QLF +++ Sbjct: 16 AAKMTMKISLIGIVLAILIGLICSLIKTLRIPILKSLV-NIYIEISRNTPLLIQLFFLYF 74 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP +GIV S II L +Y++E R+ I ++ Q ++ ++G T++Q HI Sbjct: 75 GLPKVGIVLSSESCAIIGLAFQGGSYMAEAFRTGIENVAPIQTESGLSLGFTKRQVYFHI 134 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +LPQ I TS + I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 135 VLPQAIATSVPVFCANIIFMIKETSVFSAVALADLMFVAKDLIGIYYK 182 >gi|28900494|ref|NP_800149.1| arginine transporter permease subunit ArtM [Vibrio parahaemolyticus RIMD 2210633] gi|153837563|ref|ZP_01990230.1| arginine ABC transporter, permease protein [Vibrio parahaemolyticus AQ3810] gi|260365647|ref|ZP_05778168.1| octopine transport system permease protein OccM [Vibrio parahaemolyticus K5030] gi|260877447|ref|ZP_05889802.1| octopine transport system permease protein OccM [Vibrio parahaemolyticus AN-5034] gi|260898928|ref|ZP_05907369.1| octopine transport system permease protein OccM [Vibrio parahaemolyticus Peru-466] gi|260901238|ref|ZP_05909633.1| octopine transport system permease protein OccM [Vibrio parahaemolyticus AQ4037] gi|28808874|dbj|BAC61982.1| arginine ABC transporter, permease protein [Vibrio parahaemolyticus RIMD 2210633] gi|149749060|gb|EDM59871.1| arginine ABC transporter, permease protein [Vibrio parahaemolyticus AQ3810] gi|308089208|gb|EFO38903.1| octopine transport system permease protein OccM [Vibrio parahaemolyticus Peru-466] gi|308090586|gb|EFO40281.1| octopine transport system permease protein OccM [Vibrio parahaemolyticus AN-5034] gi|308106820|gb|EFO44360.1| octopine transport system permease protein OccM [Vibrio parahaemolyticus AQ4037] gi|308111460|gb|EFO49000.1| octopine transport system permease protein OccM [Vibrio parahaemolyticus K5030] Length = 222 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 91/163 (55%), Gaps = 10/163 (6%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSI 114 +F GTPLLVQ+F+++YG V +S + +++L LN +AY +++ + + Sbjct: 55 LFTGTPLLVQIFLVYYGPGQFDAVRESVLWTWLSQPWFCAMLALALNTAAYSTQLFKGAF 114 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IP GQW A A+G+ + T+R ++LP I + S+E I + K TS+ASTITI ++ Sbjct: 115 NAIPSGQWQACRALGMNKSATLR-VLLPYAIRRAVPAYSNEVILVFKGTSLASTITIMDL 173 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 AQRI + TY L+++ YL + +I ++E Sbjct: 174 MGYAQRINAQTYDTLMVFGVAGAFYLSVNGILTLIFRQVEKKA 216 >gi|308071225|ref|YP_003872830.1| amino acid ABC transporter permease [Paenibacillus polymyxa E681] gi|305860504|gb|ADM72292.1| ABC-type amino acid transport system, permease component [Paenibacillus polymyxa E681] Length = 229 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 101/187 (54%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W I++S P L A+ +TL IA + + SL++G + + +++ IS I+ Sbjct: 9 MNLDW-EFIVESLP-LYGEAMWLTLKIAFFAILFSLVVGLLCSTV-LYYKVRGISGIVVA 65 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLLVQL+ ++YG IG+ I+ +T Y++E R + ++ K Sbjct: 66 YIELSRNTPLLVQLYFLYYGFTKIGLHMSEMTCAIVGMTFLGGGYMAEAFRGGMEAVSKT 125 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q ++ ++GL++ Q R++ILPQ S L + I +LK TS+ I + ++ A+ Sbjct: 126 QTESGLSLGLSKIQLARYVILPQAFAISVPSLGANAIFLLKETSIVGAIALLDLMNVAKD 185 Query: 181 IVSTTYQ 187 ++ Y+ Sbjct: 186 LIGMYYK 192 >gi|331084133|ref|ZP_08333239.1| hypothetical protein HMPREF0992_02163 [Lachnospiraceae bacterium 6_1_63FAA] gi|330401988|gb|EGG81561.1| hypothetical protein HMPREF0992_02163 [Lachnospiraceae bacterium 6_1_63FAA] Length = 215 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 114/202 (56%), Gaps = 14/202 (6%) Query: 29 CISFVISLIIGFFIAVIRIFFSDTIISL---IMHFYVWIFRGTPLLVQLFVIFYG---LP 82 C+ F ++L++ + ++ F + I L I+ FY+ + RGTPL++QL V +Y L Sbjct: 18 CLIFFMTLVLSLPLGLVMYFGRVSKIKLVSGIVKFYISVMRGTPLMLQLLVWYYAPYYLW 77 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + I AI++ +LN++AY +EI RS I +IP+GQ++A+ +G + +QT IILP Sbjct: 78 GMNIGGYKLTAILLGCSLNYAAYFAEIYRSGIEAIPRGQYEAAAILGYSGQQTFFRIILP 137 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTYQPLIIYCELAFVYL 200 Q I +++E I+++K TS+ +++ E+F A++I + TT P I AF Y+ Sbjct: 138 QMIKNVLPAVTNEVITLVKDTSLVYSLSYVEMFAVAKQIAAAQTTIVPFFI--AGAFYYI 195 Query: 201 ILTSFCYIIQIKIESSVTQHTY 222 F YI+ +E + Y Sbjct: 196 ----FNYIVAKVMEMFEKKMNY 213 >gi|255973159|ref|ZP_05423745.1| amino acid ABC transporter permease [Enterococcus faecalis T1] gi|255976202|ref|ZP_05426788.1| amino acid ABC transporter permease [Enterococcus faecalis T2] gi|255964177|gb|EET96653.1| amino acid ABC transporter permease [Enterococcus faecalis T1] gi|255969074|gb|EET99696.1| amino acid ABC transporter permease [Enterococcus faecalis T2] Length = 235 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 10/225 (4%) Query: 3 YEWFNLIIDS--FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 Y W L D F Q I+++L ++F + + G A ++ I Sbjct: 16 YRWEALFQDWRIFGQAFLYTILLSLGAILVAFALGIFFGSLSAT-----KSKLLHAISRV 70 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIG--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV F+ TPLL+Q V++YG P + + F I+ + L AYISE++RS I ++P Sbjct: 71 YVEFFQNTPLLIQFIVVYYGFPLLSPLLSFSITTIAILCVGLYHGAYISEVVRSGIGAVP 130 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ++A+Y+ GLT QT+R++ILPQ PL+++ ++++K+TS + I+ ++ A Sbjct: 131 RGQFEAAYSQGLTYGQTMRYVILPQAWRIMLPPLTNQVVNLIKNTSTVAIISGADVMFAA 190 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 S + + F+Y IL + K+E + YS Sbjct: 191 NSWSSVNLNYIPAFALAGFLYFILCFPLANLARKMEEK-NKKAYS 234 >gi|145637071|ref|ZP_01792734.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae PittHH] gi|145269725|gb|EDK09665.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae PittHH] Length = 221 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 120/218 (55%), Gaps = 10/218 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + F L++ A ++TL +A S ++ L + AV+ ++ + M +V + RG Sbjct: 1 MFSDFLSLMFTAALMTLGLAVCSLLLGLFLSLIFAVLE---ANRFVGKPMTVFVALLRGL 57 Query: 69 PLLVQLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 P ++ + ++++G L I F +F +++L+L F+AY S+ +R +I +IPKGQ Sbjct: 58 PEIIVVLLVYFGSTELVEMLTGEYIEFGAFGCGVLALSLIFAAYASQTLRGAIQAIPKGQ 117 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W++ A+GL++ T HI++PQ + LS++++ +LK T++ S I + ++ + A I Sbjct: 118 WESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLMRQADLI 177 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + T+QP Y A +YL +T + K+E T+ Sbjct: 178 NTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTR 215 >gi|220923581|ref|YP_002498883.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium nodulans ORS 2060] gi|219948188|gb|ACL58580.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 216 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 91/143 (63%), Gaps = 2/143 (1%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ +F+GTPLL+QLF+ ++ +P I G+ D + A + L+L+ SA++ EI R SI ++P+ Sbjct: 55 YIKLFQGTPLLMQLFLAYF-VPGIFGLSIDPWGAAALGLSLHASAFLGEIWRGSIETVPR 113 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A+ A+GL + +I+PQ + + P + ++K TS+AS I E+ + AQ Sbjct: 114 GQWEAATALGLRYWPRMALVIVPQAVRIAVPPTIGFLVQLIKGTSLASIIGFVELTRAAQ 173 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 I + T++P ++ +A VY ++ Sbjct: 174 IINNATFRPFTLFGLVALVYFVI 196 >gi|78355443|ref|YP_386892.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217848|gb|ABB37197.1| amino acid ABC transporter membrane protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 277 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 117/212 (55%), Gaps = 26/212 (12%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI-F 78 + VTL ++ I++ +SL+ G + + R+ ++ FY+ I RG P+LV L+ I F Sbjct: 52 GVAVTLYVSFIAYALSLLAGLVLGLWRVSRC-RLLREAATFYIEIVRGIPMLVILYYIAF 110 Query: 79 YGLPHI--------------GIV-------FDSFVAIIISLTLNFSAYISEIIRSSIISI 117 G P + G+ D I++LT+ +SA+I+EI+R+ + S+ Sbjct: 111 VGAPGLVDALNWLLSPLIEAGLTARISVRSLDFTWRAILALTVGYSAFIAEIVRAGVESV 170 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQ +A+ ++GL+R Q +R ++LPQ + PL+++F+++LK +++ S + + +I Q Sbjct: 171 AAGQMEAARSLGLSRWQAMRKVVLPQALRNVLPPLANDFVAMLKDSALVSALGVQDITQL 230 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT---SFC 206 + ++T+ Y +AF+YL++T S C Sbjct: 231 GKVYSASTFMFFETYNVVAFLYLVMTIGLSLC 262 >gi|116627889|ref|YP_820508.1| ABC-type amino acid transport system, permease component [Streptococcus thermophilus LMD-9] gi|116101166|gb|ABJ66312.1| ABC-type amino acid transport system, permease component [Streptococcus thermophilus LMD-9] Length = 232 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 105/185 (56%), Gaps = 10/185 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ + +++L++G + + ++ I YV IF+ TPLLVQ V+FYG Sbjct: 33 TLGISIGALIVALLLGLIFGAMSST-HNKVLRGISRVYVEIFQNTPLLVQFVVVFYG--- 88 Query: 84 IGIVFDSFVAIIISLT------LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 I I+ D V I SLT + AYISEIIR+ I +IPKGQ +A+ + G T T+R Sbjct: 89 ISILTDGNVMIPTSLTAILCVGVYTGAYISEIIRTGIEAIPKGQTEAALSQGFTYADTMR 148 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 IILPQ + T PL+++ ++++K+TS + I+ +I TA+ T + + AF Sbjct: 149 IIILPQAVRTILPPLTNQVVNLIKNTSTVAIISGADIMFTAKAWAYDTTNYVPAFAGAAF 208 Query: 198 VYLIL 202 +Y I+ Sbjct: 209 LYFIM 213 >gi|54309260|ref|YP_130280.1| arginine transporter permease subunit ArtM [Photobacterium profundum SS9] gi|46913692|emb|CAG20478.1| Putative arginine ABC transporter, permease protein [Photobacterium profundum SS9] Length = 223 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 110/210 (52%), Gaps = 11/210 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 + + +L + ++ ++ + F + + + T + I + +F GTPLLVQ+F+ Sbjct: 9 MLGGLATSLELTAVALLVGCTLAFLM-TLTLIMRTTGLHWISSGIITLFTGTPLLVQIFL 67 Query: 77 IFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 I+YG + +SF+ +++L LN +AY +++ + + +IP GQW A A Sbjct: 68 IYYGPGQFEAIRESFLWNWLSQPWFCAMLALALNTAAYSTQLFKGAFNAIPSGQWQACRA 127 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ + T+R ++LP I + S+E I + K TS+ASTITI ++ AQRI + TY Sbjct: 128 LGMDKFATLR-VLLPFAIRRAIPAYSNEVILVFKGTSLASTITIMDLMGYAQRINAQTYD 186 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSV 217 L+++ YL + +I ++E Sbjct: 187 TLVVFSIAGAFYLAVNGILTLIFRQVEKKA 216 >gi|329124092|ref|ZP_08252639.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Haemophilus aegyptius ATCC 11116] gi|327467517|gb|EGF13015.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Haemophilus aegyptius ATCC 11116] Length = 221 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 120/224 (53%), Gaps = 10/224 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + F L++ A ++TL +A S ++ L + AV+ ++ I M +V + RG Sbjct: 1 MFSDFLSLMFTAALMTLGLAVCSLLLGLFLSLLFAVLE---ANRFIGKPMTVFVTLLRGL 57 Query: 69 PLLVQLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 P ++ + ++++G L I F +F + +L+L F+AY S+ +R +I +IPKGQ Sbjct: 58 PEIIVVLLVYFGSTELVEMLTGEYIEFGAFGCGVFALSLIFAAYASQTLRGAIQAIPKGQ 117 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W++ A+GL++ T HI++PQ + LS++++ +LK T++ S I + ++ + A I Sbjct: 118 WESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLMRQADLI 177 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + T+QP Y A +YL +T + K+E T+ V Sbjct: 178 NTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFERGVK 221 >gi|315640805|ref|ZP_07895905.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] gi|315483417|gb|EFU73913.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] Length = 215 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 9/197 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L ID F + A+ I+ + SLIIG +A++++ + +I + YV FR Sbjct: 10 SLFIDGFKYTILASF--------IALIASLIIGTLMAILQLS-KNNVIRRLAKAYVEFFR 60 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PLL+ + + + +P + FD F A I LT+ SA+I+E +RS I ++ GQ +A Sbjct: 61 NVPLLIIVMIFYVVIPLYLVPFDGFQAGTIGLTIYTSAFIAETVRSGIQTVHSGQMEAGL 120 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 + G T QT+R+I+LPQ PL +FI+++K++S+ + + +I I STT+ Sbjct: 121 SSGFTYWQTMRYIVLPQAFKIVIPPLGGQFINLIKNSSILAMVAGLDIMYQGDLIASTTF 180 Query: 187 QPLIIYCELAFVYLILT 203 Y + YLILT Sbjct: 181 NTFDTYIIVGIFYLILT 197 >gi|294851193|ref|ZP_06791866.1| polar amino acid transport system permease [Brucella sp. NVSL 07-0026] gi|294819782|gb|EFG36781.1| polar amino acid transport system permease [Brucella sp. NVSL 07-0026] Length = 240 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/206 (32%), Positives = 114/206 (55%), Gaps = 3/206 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I D++ L +T+ IA ++ +I IA++ + + I YV F Sbjct: 5 FSVIFDNW-TLFARGTWLTIVIAIVAIATGFLISIPIALMALSHRRPL-RWISSAYVEWF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R P +V L++ FYGLP +G+ + I+L S+Y +EIIR +I+++P+GQ +A+ Sbjct: 63 RNIPFIVVLYLFFYGLPFMGVRLPESIVGTIALAFFASSYFAEIIRGAILAVPQGQMEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 AIG++ Q + I+ PQT+ P ++ IS++K TSV STIT+ E+ I T Sbjct: 123 RAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETSVLSTITVAELTYQGLVIQGET 182 Query: 186 YQPLIIYCELAFVYLILTS-FCYIIQ 210 + P I+ A +Y ++T+ F Y++ Sbjct: 183 FAPFEIFLTTAAIYWMITAIFAYLMH 208 >gi|163856555|ref|YP_001630853.1| glutamine ABC transporter permease protein [Bordetella petrii DSM 12804] gi|163260283|emb|CAP42585.1| glutamine transport system permease protein [Bordetella petrii] Length = 219 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 112/201 (55%), Gaps = 5/201 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W ++I S P LL ++ T+ I V ++G V R + ++S I Sbjct: 1 MQFDW-SVIWASMPNLLDGTLM-TVKITFWGLVGGFLLGALAGVARAY-GPRLLSAIAQV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y+ + RGTP++VQ+ I++ LP + G+ D+ A I +L +N AYI+EI+R S++S+ Sbjct: 58 YIAVIRGTPIVVQVMFIYFALPLMVPGLRVDAIWAAIATLIINSGAYIAEIVRGSLLSVH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL + + HII P PL ++ I LK +S+ I + E+ + Sbjct: 118 KGLKEAGQAMGLPFYKILLHIIGPVAFRRMIPPLGNQCIISLKDSSLFIVIGVAELTRQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVY 199 Q I+++ ++ + I+ +A +Y Sbjct: 178 QEIMASNFRAVEIWSAVAIIY 198 >gi|29375694|ref|NP_814848.1| amino acid ABC transporter, permease protein [Enterococcus faecalis V583] gi|227518373|ref|ZP_03948422.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|227552902|ref|ZP_03982951.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|229546203|ref|ZP_04434928.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|229550388|ref|ZP_04439113.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|256618702|ref|ZP_05475548.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis ATCC 4200] gi|256852768|ref|ZP_05558138.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256958615|ref|ZP_05562786.1| amino acid ABC transporter permease [Enterococcus faecalis DS5] gi|256962286|ref|ZP_05566457.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis Merz96] gi|257078031|ref|ZP_05572392.1| amino acid ABC transporter permease [Enterococcus faecalis JH1] gi|257082919|ref|ZP_05577280.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis E1Sol] gi|257085621|ref|ZP_05579982.1| amino acid ABC transporter permease [Enterococcus faecalis Fly1] gi|257086473|ref|ZP_05580834.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis D6] gi|257089530|ref|ZP_05583891.1| ABC polar amino acid transporter permease [Enterococcus faecalis CH188] gi|257418947|ref|ZP_05595941.1| ABC amino acid transporter permease [Enterococcus faecalis T11] gi|257422965|ref|ZP_05599955.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|293383315|ref|ZP_06629230.1| amino acid ABC transporter, permease protein [Enterococcus faecalis R712] gi|293387528|ref|ZP_06632077.1| amino acid ABC transporter, permease protein [Enterococcus faecalis S613] gi|294780989|ref|ZP_06746341.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|300860018|ref|ZP_07106106.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|307268768|ref|ZP_07550136.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|307274580|ref|ZP_07555760.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|307278846|ref|ZP_07559909.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|307288577|ref|ZP_07568561.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|307291101|ref|ZP_07570986.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|312899593|ref|ZP_07758919.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|312903651|ref|ZP_07762827.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|312905822|ref|ZP_07764842.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|312909123|ref|ZP_07767982.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|312951370|ref|ZP_07770268.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|29343155|gb|AAO80918.1| amino acid ABC transporter, permease protein [Enterococcus faecalis V583] gi|227074051|gb|EEI12014.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|227177974|gb|EEI58946.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|229304510|gb|EEN70506.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|229308727|gb|EEN74714.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|256598229|gb|EEU17405.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis ATCC 4200] gi|256711227|gb|EEU26265.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256949111|gb|EEU65743.1| amino acid ABC transporter permease [Enterococcus faecalis DS5] gi|256952782|gb|EEU69414.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis Merz96] gi|256986061|gb|EEU73363.1| amino acid ABC transporter permease [Enterococcus faecalis JH1] gi|256990949|gb|EEU78251.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis E1Sol] gi|256993651|gb|EEU80953.1| amino acid ABC transporter permease [Enterococcus faecalis Fly1] gi|256994503|gb|EEU81805.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis D6] gi|256998342|gb|EEU84862.1| ABC polar amino acid transporter permease [Enterococcus faecalis CH188] gi|257160775|gb|EEU90735.1| ABC amino acid transporter permease [Enterococcus faecalis T11] gi|257164789|gb|EEU94749.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|291079338|gb|EFE16702.1| amino acid ABC transporter, permease protein [Enterococcus faecalis R712] gi|291083038|gb|EFE20001.1| amino acid ABC transporter, permease protein [Enterococcus faecalis S613] gi|294451935|gb|EFG20385.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|295112702|emb|CBL31339.1| amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-) [Enterococcus sp. 7L76] gi|300850836|gb|EFK78585.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|306497755|gb|EFM67287.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|306500484|gb|EFM69817.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|306504517|gb|EFM73724.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|306508732|gb|EFM77822.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|306514896|gb|EFM83443.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|310628161|gb|EFQ11444.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|310630630|gb|EFQ13913.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|310633004|gb|EFQ16287.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|311290547|gb|EFQ69103.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|311293272|gb|EFQ71828.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|315028075|gb|EFT40007.1| ABC transporter, permease protein [Enterococcus faecalis TX2137] gi|315030716|gb|EFT42648.1| ABC transporter, permease protein [Enterococcus faecalis TX4000] gi|315031596|gb|EFT43528.1| ABC transporter, permease protein [Enterococcus faecalis TX0017] gi|315034962|gb|EFT46894.1| ABC transporter, permease protein [Enterococcus faecalis TX0027] gi|315144631|gb|EFT88647.1| ABC transporter, permease protein [Enterococcus faecalis TX2141] gi|315148455|gb|EFT92471.1| ABC transporter, permease protein [Enterococcus faecalis TX4244] gi|315150402|gb|EFT94418.1| ABC transporter, permease protein [Enterococcus faecalis TX0012] gi|315153641|gb|EFT97657.1| ABC transporter, permease protein [Enterococcus faecalis TX0031] gi|315156541|gb|EFU00558.1| ABC transporter, permease protein [Enterococcus faecalis TX0043] gi|315158367|gb|EFU02384.1| ABC transporter, permease protein [Enterococcus faecalis TX0312] gi|315160938|gb|EFU04955.1| ABC transporter, permease protein [Enterococcus faecalis TX0645] gi|315165529|gb|EFU09546.1| ABC transporter, permease protein [Enterococcus faecalis TX1302] gi|315168386|gb|EFU12403.1| ABC transporter, permease protein [Enterococcus faecalis TX1341] gi|315170969|gb|EFU14986.1| ABC transporter, permease protein [Enterococcus faecalis TX1342] gi|315573710|gb|EFU85901.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B] gi|315577479|gb|EFU89670.1| ABC transporter, permease protein [Enterococcus faecalis TX0630] gi|315582675|gb|EFU94866.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A] gi|323480357|gb|ADX79796.1| amino acid ABC transporter, permease protein [Enterococcus faecalis 62] gi|329576391|gb|EGG57904.1| ABC transporter, permease protein [Enterococcus faecalis TX1467] Length = 237 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 10/225 (4%) Query: 3 YEWFNLIIDS--FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 Y W L D F Q I+++L ++F + + G A ++ I Sbjct: 18 YRWEALFQDWRIFGQAFLYTILLSLGAILVAFALGIFFGSLSAT-----KSKLLHAISRV 72 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIG--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV F+ TPLL+Q V++YG P + + F I+ + L AYISE++RS I ++P Sbjct: 73 YVEFFQNTPLLIQFIVVYYGFPLLSPLLSFSITTIAILCVGLYHGAYISEVVRSGIGAVP 132 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ++A+Y+ GLT QT+R++ILPQ PL+++ ++++K+TS + I+ ++ A Sbjct: 133 RGQFEAAYSQGLTYGQTMRYVILPQAWRIMLPPLTNQVVNLIKNTSTVAIISGADVMFAA 192 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 S + + F+Y IL + K+E + YS Sbjct: 193 NSWSSVNLNYIPAFALAGFLYFILCFPLANLARKMEEK-NKKAYS 236 >gi|261253293|ref|ZP_05945866.1| histidine ABC transporter permease protein HisM [Vibrio orientalis CIP 102891] gi|260936684|gb|EEX92673.1| histidine ABC transporter permease protein HisM [Vibrio orientalis CIP 102891] Length = 225 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 110/203 (54%), Gaps = 7/203 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+LII+S P L + T + + +I L++ + V R + + + +++ F Sbjct: 3 FSLIIESLPIYL-DGLWTTAWLVGAALIIGLVVAIPLGVARNS-PNYLFNGPSWAFIYFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I +PKG Sbjct: 61 RGTPLLVQLYLIYYGMDQFFPVKDTLWEHAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + +A+ A G++ +T R IILP + + S+E I +L ++VA +TI ++ A+ Sbjct: 121 EVEAAKAYGMSTFKTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIVDLTGAARL 180 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + S Y P + Y+ LT Sbjct: 181 VNSRYYAPFESFLTAGLFYMALT 203 >gi|309973358|gb|ADO96559.1| Arginine ABC transporter, permease protein ArtM [Haemophilus influenzae R2846] Length = 227 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 97/169 (57%), Gaps = 10/169 (5%) Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISE 108 ++ Y+ +F GTPLLVQ F+I+ G + DS + ++L LN +AY ++ Sbjct: 49 VNLYLTLFTGTPLLVQFFLIYAGPGQFQWIIDSPLWFFLSNAWFCATLALALNSAAYSTQ 108 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 + ++ +I KGQW++ A+GL+R QT++ I++P + + S+E I + K T++AST Sbjct: 109 LFHGAVKAIHKGQWESCAALGLSRLQTLK-ILIPYALKRALPSYSNEIILVFKGTALAST 167 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 ITI +I A+++ T Y + IY +YLI+T ++ K+E V Sbjct: 168 ITIMDIMGYARQLYGTEYDAITIYGIAGGIYLIITGIATLLLRKLEKKV 216 >gi|322368977|ref|ZP_08043544.1| ABC-type transport system permease protein (probable substrate glutamine) [Haladaptatus paucihalophilus DX253] gi|320551708|gb|EFW93355.1| ABC-type transport system permease protein (probable substrate glutamine) [Haladaptatus paucihalophilus DX253] Length = 276 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 114/207 (55%), Gaps = 14/207 (6%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI---FFSDTIISLIMHFYV 62 + L++ PQ + A ++V I IS V+SL G + + R+ F+ I +L + F Sbjct: 55 YQLLVTILPQFIDALLLVLQ-IILISGVLSLTFGVMVGLGRVSQTGFTQRIATLYVEF-- 111 Query: 63 WIFRGTPLLVQLFVIFYGLP------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 FRGTPLL QLFV++ G+P + SF A II LTLN +AYI E ++ I S Sbjct: 112 --FRGTPLLFQLFVVYLGVPAFWPPGQFPLQNWSFAAAIIGLTLNHTAYIGEAVKGGINS 169 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + GQ +A+ ++G++ ++R+++LPQ + + ++ + ++K TS+ + + IPE+ Sbjct: 170 VSGGQSEAARSLGMSYIDSMRYVVLPQAWRNALAAIGNDLVILVKDTSLLTVLAIPELIS 229 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 + + S T+ ++ YL++T Sbjct: 230 VFRNVNSATFDAWTPIVVVSVAYLVIT 256 >gi|229593009|ref|YP_002875128.1| putative amino acid ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229364875|emb|CAY52939.1| putative amino acid BAC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 239 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 122/228 (53%), Gaps = 15/228 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D + L A +VT+ +A + L +G +A+ + + F +FRG P Sbjct: 13 DGWGSALLAGALVTIALALACVPLGLPLGLAVALAARSRRRWLRTGATAFST-VFRGLPE 71 Query: 71 LVQLFVIFYG-----------LPHIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 L+ L +I+YG + + G + ++FVA +I+ +L F+A+ SEI S++ ++P Sbjct: 72 LLTLLIIYYGCQIAARKLFAAMGYQGEVAINTFVAAMIAFSLVFAAFSSEIWLSALKTLP 131 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVP-LSSEFISILKSTSVASTITIPEIFQT 177 KGQ +A+ +GL++ T R ++LPQ +T A+P LS+ ++S+LK TS+ STI++ ++ + Sbjct: 132 KGQLEAAAMLGLSKGTTFRRVVLPQ-LTRIALPGLSNNWLSLLKDTSLVSTISLVDLMRQ 190 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 VS T +P++ Y YL ++ + +E ++H S Sbjct: 191 TSLAVSVTKEPMLFYTVACLGYLFFSALSGRVFHVLERCFSRHQQSAK 238 >gi|317053174|ref|YP_004119528.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316953501|gb|ADU72972.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 222 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 2/195 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I+D P LL A + +L +A ++F ++I I + + + ++ YV T Sbjct: 8 ILDQLPYLLGGAWI-SLQLAVLAFAFGMVIAMICTSI-LRYGPKLAGKCINAYVVFATNT 65 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P LVQ++ +F+ LP +GI+ F A++I T N AY+ EI R+ S+ + + +A+ + Sbjct: 66 PQLVQIYFLFFALPEVGILLSPFTAVLIGATFNAGAYLCEIQRAGFDSVRRMEIEAAEVL 125 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G +R Q IR++ILP I PLS++FI + TS+AS + E+ + S TY Sbjct: 126 GFSRVQIIRYVILPHVIKVMFRPLSNQFIVMTLGTSMASMFGVEELTGRTYNLSSQTYLS 185 Query: 189 LIIYCELAFVYLILT 203 + + A +Y+ +T Sbjct: 186 VESFSVAAVIYIAIT 200 >gi|254456576|ref|ZP_05070005.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Candidatus Pelagibacter sp. HTCC7211] gi|207083578|gb|EDZ61004.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Candidatus Pelagibacter sp. HTCC7211] Length = 223 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 114/201 (56%), Gaps = 2/201 (0%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 +F + + P +L V T+ + S ++ +II ++R+ + +I Y+ Sbjct: 3 YFAFLSEHGPTMLLGT-VTTIKVLVCSTILYIIISLIFGLMRLS-KNPLIQGTATVYIEF 60 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRGT LLVQLF +Y LP G+ ++F A ++++ +NF AY +EI+R I+++PKGQW+ Sbjct: 61 FRGTSLLVQLFWFYYVLPFFGLTLEAFTAGVVAIGMNFGAYGAEIVRGGILAVPKGQWEG 120 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++A+ T + +R II+PQ P ++ + +LK+T++ + +T+ ++ A++I S Sbjct: 121 AFALNFTPAKRMRKIIIPQIFPIILPPAANLTVELLKATALVALVTVVDLTFEAKQINSI 180 Query: 185 TYQPLIIYCELAFVYLILTSF 205 T+ + +Y I++ F Sbjct: 181 TWLSAQCFGTALLIYYIISRF 201 >gi|13473260|ref|NP_104827.1| glutamine ABC transporter (integral membrane protein) [Mesorhizobium loti MAFF303099] gi|14024008|dbj|BAB50613.1| glutamine ABC transporter (integral membrane protein) [Mesorhizobium loti MAFF303099] Length = 216 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 31/203 (15%) Query: 15 QLLYA------AIVVTLPIACISFVISLIIGFFIAV------------IRIFFSDTIISL 56 Q+LYA VTL ++ + +SL+ G + V +RIF SDTI Sbjct: 4 QILYALPFLAKGFAVTLWVSLLVVTLSLVAGVLLGVGLVYGPAPLRWAVRIF-SDTI--- 59 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 RG P+LV +F ++YGLP IG+ SF A +++LTL +A + E +R ++ S Sbjct: 60 ---------RGIPILVLMFFVYYGLPAIGLHLPSFWAAVLALTLFKTAQVIEYLRGAVAS 110 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQ +A+ AIGLT +Q + +I PQ P + +K +++ S + I ++ Q Sbjct: 111 IPKGQSEAAMAIGLTFRQRLTFVIFPQAFRRFLPPWINGVTDAVKGSALVSLLGITDLMQ 170 Query: 177 TAQRIVSTTYQPLIIYCELAFVY 199 +++ TY+ + +Y A +Y Sbjct: 171 AINQVIGRTYEAMPLYILGALIY 193 >gi|167033327|ref|YP_001668558.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166859815|gb|ABY98222.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 236 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 120/211 (56%), Gaps = 12/211 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++VT + ISF + ++G +A+ R+ S ++ + YV+ FRG+PLL QLF+++Y Sbjct: 26 GLLVTAKLVAISFTLGAVLGLLLALARMSRS-LVLQRMAAGYVYFFRGSPLLAQLFLLYY 84 Query: 80 GLP-------HIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 GL +G+ + +++ +++ TLN +AY +EI R S++++ GQ +A+ A+ Sbjct: 85 GLGSLKGFWQDVGLWWFFREAWFCTLLAFTLNTAAYQAEIFRGSLMAVAPGQHEAARALN 144 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L R T +ILPQ++ + PL +E I ++K++++AS +TI ++ + S ++ Sbjct: 145 LKRSTTFFKVILPQSLLVAIGPLGNELILMIKASAIASLVTIYDLMGVTKLAFSRSFD-F 203 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 IY A +YL++ + +E + +H Sbjct: 204 QIYLWAAVLYLVIVELVRRLLKHLEGRLGRH 234 >gi|218887772|ref|YP_002437093.1| polar amino acid ABC transporter inner membrane protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758726|gb|ACL09625.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 316 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 49/127 (38%), Positives = 84/127 (66%), Gaps = 3/127 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV R TPLL+QLFV+++ L P +G+ F A +++L+L AYI+EI+R+ I+S+P Sbjct: 157 YVETVRNTPLLIQLFVVYFVLAPVLGL--GRFAAGVLALSLFEGAYIAEILRAGILSVPT 214 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+AS ++G+ T ++LPQ T+ PL+ + +S++K +S+ STI + ++ AQ Sbjct: 215 GQWEASRSLGMDVPGTYMEVVLPQAARTALPPLTGQLVSLVKDSSLVSTIALHDLAMQAQ 274 Query: 180 RIVSTTY 186 + + T+ Sbjct: 275 AVAADTF 281 >gi|254449531|ref|ZP_05062968.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Octadecabacter antarcticus 238] gi|198263937|gb|EDY88207.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Octadecabacter antarcticus 238] Length = 223 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 10/203 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFY 61 EW + L+ VVT+ I + +++LI F + RI F+ + + Y Sbjct: 7 EW-----QGYIGLILQGAVVTIEITILGCIVALIAAFIAGLGRISRFWP---LRWLATAY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + FRGT + VQLF ++ LP +G+ A +++L LN AY +E++R +I SIP+ Q Sbjct: 59 IEFFRGTSIFVQLFWAYFVLPLLGVPLSPLQAGVLALGLNVGAYGAEVVRGAIKSIPREQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++A A+ LTR Q +RH+ILPQ + I +LK T+V S I++ ++ AQ + Sbjct: 119 YEACTALNLTRFQEMRHVILPQAFVRMLPTFGNNAIELLKGTAVVSLISLSDMTFQAQIV 178 Query: 182 VSTTYQPLIIYCELAFVYLILTS 204 + T I + + +Y + +S Sbjct: 179 RAQTGSTAIPFLTILLLYFLFSS 201 >gi|331085656|ref|ZP_08334739.1| hypothetical protein HMPREF0987_01042 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406579|gb|EGG86084.1| hypothetical protein HMPREF0987_01042 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 215 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 103/172 (59%), Gaps = 10/172 (5%) Query: 29 CISFVISLIIGFFIAVIRIFFSD----TIISLIMHFYVWIFRGTPLLVQLFVIF---YGL 81 C+ F ++LI + ++ ++F +IS I+ Y+ + RGTPL++QL V + Y L Sbjct: 18 CLIFGMTLIFSLPLGLL-VYFGRVSRIKLISWIVKIYISVMRGTPLMLQLLVWYFAPYYL 76 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + I AI++ +LN++AY +EI RS I SIPKGQ++A+ +G +R+QT I+L Sbjct: 77 WQMNIGGYKLTAILLGCSLNYAAYFAEIYRSGIESIPKGQYEAAALLGYSRQQTFLRIVL 136 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTYQPLII 191 PQ + +++E I+++K TS+ +++ E+F A++I + TT P I Sbjct: 137 PQMVKNVLPSVTNEVITLVKDTSLVYSLSYIEMFAVAKQIAAAQTTVVPFFI 188 >gi|312278470|gb|ADQ63127.1| ABC-type amino acid transport system, permease component [Streptococcus thermophilus ND03] Length = 232 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 105/185 (56%), Gaps = 10/185 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ + +++L++G + + ++ I YV IF+ TPLLVQ V+FYG Sbjct: 33 TLGISIGALIVALLLGLIFGAMSST-RNKVLRGISRVYVEIFQNTPLLVQFVVVFYG--- 88 Query: 84 IGIVFDSFVAIIISLT------LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 I I+ D V I SLT + AYISEIIR+ I ++PKGQ +A+ + G T T+R Sbjct: 89 ISILTDGNVMIPTSLTAILCVGVYTGAYISEIIRTGIEAVPKGQTEAALSQGFTYADTMR 148 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 IILPQ + T PL+++ ++++K+TS + I+ +I TA+ T + + AF Sbjct: 149 IIILPQAVRTILPPLTNQVVNLIKNTSTVAIISGADIMFTAKAWAYDTTNYVPAFAGAAF 208 Query: 198 VYLIL 202 +Y I+ Sbjct: 209 LYFIM 213 >gi|300313536|ref|YP_003777628.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300076321|gb|ADJ65720.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 223 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 1/203 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y++ L + ++ + T+ + I V+ + +G F A R + ++ Sbjct: 1 MAYQFDFLSTFDYTDVIVKGVATTIELIAIGGVLGVAVGIFGAWARTQ-GPGWLKPVVSG 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV I R TP LVQLF IF+GLP + I A I+++ +N AY +EIIR+ + +IP+G Sbjct: 60 YVEIIRNTPFLVQLFFIFFGLPSLDIHISEITAAIVAMVINLGAYSTEIIRAGVQAIPRG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++ ++R Q RHIIL + LSS+ + ++ ++V S I + E+ A Sbjct: 120 QIEAAQSLSMSRMQIFRHIILRPALQKIWPALSSQVVIVMLGSAVCSQIAVEELSFAANF 179 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I ++ Y +YL+L Sbjct: 180 IQGRNFRAFEAYIVATAIYLVLA 202 >gi|330873261|gb|EGH07410.1| amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 277 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/180 (35%), Positives = 110/180 (61%), Gaps = 3/180 (1%) Query: 37 IIGFFIAVIRIFFSDTIISL-IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII 95 ++GF A+ R+ S++ ++ I FY FRGTPLL+Q+ +I+ GLP +GIV + A + Sbjct: 90 LLGFVTALARL--SNSAVAFGIASFYASFFRGTPLLIQILLIYLGLPQLGIVPGAIAAGV 147 Query: 96 ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSE 155 I+L+LN+ AY+SEI R+ II + GQ +A+ A+ L Q + LPQ + T P +++ Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPTQIFWRVTLPQAMRTIIPPTTNQ 207 Query: 156 FISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 FIS+LK +S+ S + + E+ AQ ++Y+ + + A +Y I++ ++Q ++E Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLEK 267 >gi|158424110|ref|YP_001525402.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158330999|dbj|BAF88484.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 227 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 116/201 (57%), Gaps = 9/201 (4%) Query: 6 FN-LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 FN +II + + ++VT+ +A V + +G +AV+R F + + I+ V I Sbjct: 12 FNPVIIARYLPAIGKGMLVTIEVAACVIVTGIALGLALAVVRSFRLKAVNAAII-VMVDI 70 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 R P LV + ++++GLP++G+ SF + + L+L +A+ E+ + I+S+ KGQW+A Sbjct: 71 LRALPPLVLVLLVYFGLPNVGLTLPSFAVLWLVLSLVLAAFAEEVFWAGIVSVRKGQWEA 130 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ---TAQRI 181 GLT QT+R+I+LPQ I + PL++ I+I K+T++ + I +PEI TAQ Sbjct: 131 GRCTGLTEFQTLRYIVLPQAIRLTVPPLTNRTIAITKNTALGTVIGVPEILNQATTAQSF 190 Query: 182 VSTTYQPLIIYCELAFVYLIL 202 S + PL++ A YLIL Sbjct: 191 -SGSATPLMMG---AVAYLIL 207 >gi|327194083|gb|EGE60957.1| putative ArtM, ABC-type arginine/histidine transport system, permease component ArtM [Rhizobium etli CNPAF512] Length = 252 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 112/202 (55%), Gaps = 18/202 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I + +P L+ A + TL + IS V I+ +A+ ++ + Y F Sbjct: 26 FSWIFNYWP-LIVAGAIQTLLLLVISVVFGFILAIGLALAQVN-GPVWLRGCAKAYCTSF 83 Query: 66 RGTPLLVQLFVIFYG----LPHIG---------IVFDSFVAIIISLTLNFSAYISEIIRS 112 RGTPLL+QL++++YG LP I IV + F +S TLN++AY +E++R Sbjct: 84 RGTPLLIQLWLLYYGVGSLLPMIPGLRTSFLWPIVREGFFFAAVSFTLNYAAYEAEVLRG 143 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +++++PKG+ +A A G++R +R I LP+ I + + E + LK+T +A T+T+ Sbjct: 144 ALLAVPKGELEAGRAFGMSRWTLLRRIWLPRAIRIALPTIGGEVVLQLKATPLAFTVTVM 203 Query: 173 EIFQTAQRIVSTT---YQPLII 191 +++ A ++ T Y+PLII Sbjct: 204 DLYAVAYKVRQDTLLVYEPLII 225 >gi|16273100|ref|NP_439334.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae Rd KW20] gi|260581121|ref|ZP_05848942.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Haemophilus influenzae RdAW] gi|1168526|sp|P45090|ARTQ_HAEIN RecName: Full=Arginine ABC transporter permease protein ArtQ gi|972902|gb|AAA95979.1| ArtQ [Haemophilus influenzae] gi|1574103|gb|AAC22829.1| arginine ABC transporter, permease protein (artQ) [Haemophilus influenzae Rd KW20] gi|260092250|gb|EEW76192.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Haemophilus influenzae RdAW] Length = 221 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 120/224 (53%), Gaps = 10/224 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + F L++ A ++TL +A S ++ L + AV+ ++ + M +V + RG Sbjct: 1 MFSDFLSLMFTAALMTLGLAVCSLLLGLFLSLIFAVLE---ANRFVGKPMTVFVALLRGL 57 Query: 69 PLLVQLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 P ++ + ++++G L I F +F +++L+L F+AY S+ +R +I +IPKGQ Sbjct: 58 PEIIVVLLVYFGSTELVEMLTGEYIEFGAFGCGVLALSLIFAAYASQTLRGAIQAIPKGQ 117 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W++ A+GL++ T HI++PQ + LS++++ +LK T++ S I + ++ A I Sbjct: 118 WESGAALGLSKSYTFIHIVMPQVWRHALPGLSTQWLVLLKDTALVSLIGVDDLMHQADLI 177 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + T+QP Y A +YL +T + K+E T+ V Sbjct: 178 NTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFERGVK 221 >gi|257869445|ref|ZP_05649098.1| amino acid ABC transporter [Enterococcus gallinarum EG2] gi|257803609|gb|EEV32431.1| amino acid ABC transporter [Enterococcus gallinarum EG2] Length = 218 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 112/198 (56%), Gaps = 5/198 (2%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L + VT+ ++ +S + S +IG V+R F + S I+ + + R PLL+ + Sbjct: 13 RFLIDGLRVTIEVSVLSIIFSFLIGGLAGVLR-FTNIPFFSKILGVVIDVIRNLPLLLII 71 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F ++ LP IGI F+ F + +++LT+ SA +SEI R+ + ++PKGQ +A + GL+ Q Sbjct: 72 FFTYFALPQIGIRFNIFWSAVVALTIFESAMLSEIFRAGLNAVPKGQMEAGLSTGLSYVQ 131 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS-TTYQPLIIYC 193 +R I++PQ + S+ IS++K TS+A I++PE+ A+ I T L ++ Sbjct: 132 VLRSIVMPQAFKAMLPAIVSQLISLIKDTSLAVIISLPELTHHARIIYGQNTNYVLPMFL 191 Query: 194 ELAFVYLILTSFCYIIQI 211 + +Y I+ CY + + Sbjct: 192 AMTVLYFIV---CYALSL 206 >gi|123441655|ref|YP_001005639.1| histidine transport system permease protein HisM [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088616|emb|CAL11411.1| histidine transport system permease protein HisM [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 238 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 11/196 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + VTL + S V+ ++ +AV R+ I L + + +IFRGTPL VQL V Sbjct: 20 FTGMAVTLWLLISSVVMGGLLAIPLAVARVA-ERRWIRLPVWIFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F I++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYSLEIVRGNDLLNAFFRSGLNCTILALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G +R + R IILP + + S+E I +L ST++A T T+P+I + A+ I + TYQ Sbjct: 139 YGFSRFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDILKIARDINAATYQ 198 Query: 188 PLIIYCELAFVYLILT 203 P + A +YLI++ Sbjct: 199 PFYAFGIAAVLYLIIS 214 >gi|188583628|ref|YP_001927073.1| polar amino acid ABC transporter inner hypothetical protein [Methylobacterium populi BJ001] gi|179347126|gb|ACB82538.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium populi BJ001] Length = 240 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 11/203 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 ++ +L + + T+ A S++I+ +G + V+R S + + YV FR PL Sbjct: 19 GTYADMLLSGLAWTVATALCSWIIAFALGSVVGVMRTLPSRAA-NAVGAAYVEGFRNVPL 77 Query: 71 LVQLFVIFYGLPHI-----GIVFDS-----FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 LVQ+F+ ++ LP + G F ++ L +A ++E +R+ + S+P+G Sbjct: 78 LVQMFLWYFVLPELLPRDLGTAVKQMPDAPFYTAVLCLGFFTAARVAEQVRAGLRSLPRG 137 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q A+ A+GLTR QT RH++LP PL+SEF++ LK+TSVA TI + E+ A+ Sbjct: 138 QAQAALALGLTRAQTYRHVLLPNAYRIILPPLTSEFLNNLKNTSVALTIGLLELTARARA 197 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + ++Q + +Y+ L Sbjct: 198 MQEFSFQVFEAFTAATLLYVALN 220 >gi|206577524|ref|YP_002237665.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288934542|ref|YP_003438601.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|290508742|ref|ZP_06548113.1| polar amino acid transport system ATP-binding protein [Klebsiella sp. 1_1_55] gi|206566582|gb|ACI08358.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288889251|gb|ADC57569.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] gi|289778136|gb|EFD86133.1| polar amino acid transport system ATP-binding protein [Klebsiella sp. 1_1_55] Length = 312 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 117/212 (55%), Gaps = 25/212 (11%) Query: 2 KYEWFNLIIDSF--PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 ++EW ++I ++F P ++ +++TL + IS + G +A++R+ S+ ++ + Sbjct: 46 RFEW-SVIAENFTGPSIIQG-VLMTLQLTAISVIFGFAGGTILALMRLS-SNPVLVAVSW 102 Query: 60 FYVWIFRGTPLLVQLFVIFY----------GLPHIGIVFDS--------FVAIIISLTLN 101 Y W FRG P+LVQLF+ + LP +G ++ + F A +I+L ++ Sbjct: 103 GYTWFFRGVPMLVQLFLWYNIAALYPTISISLPWVGEIWSASANSLISPFSAAVIALVMH 162 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 SAY +EIIR+ I S+ GQ +A+ A+G Q H ILPQ + P +E I LK Sbjct: 163 QSAYAAEIIRAGIQSVGTGQVEAARALGYRPAQIFLHTILPQAMRAILPPAGNEVIGQLK 222 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQ--PLII 191 +T+V S I++ ++ +AQ I TY+ PL++ Sbjct: 223 TTAVVSVISLQDVLFSAQIIYQRTYEVIPLLL 254 >gi|254449741|ref|ZP_05063178.1| ABC transporter permease protein [Octadecabacter antarcticus 238] gi|198264147|gb|EDY88417.1| ABC transporter permease protein [Octadecabacter antarcticus 238] Length = 221 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 2/203 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y W + + L+ ++ T+ I I FV L +G + + R + + Sbjct: 1 MDYVWDFGSVWEYRAALWTGLINTVRIFAICFVTGLSLGLMMGLAR-YSVRRWLRWPAAC 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 ++ FR TP+LVQ+F ++ P + + +A + +TLN +A+ +EI R I SI Sbjct: 60 FIEFFRNTPVLVQIFWFYFAFPILAPFEISALMAAALGITLNSAAFSAEIFRGGIQSIDP 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A AIG+ ++ + IILPQ + L++ I I K T++AS I ++ A+ Sbjct: 120 GQWEAGRAIGMRHREIMARIILPQAVRRMLPALTNRGIEIFKMTTLASAIAYADVLHQAR 179 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 I S Y P+ Y +A + ++ Sbjct: 180 LIASVNYNPIEAYTVVAIAFFVI 202 >gi|220920917|ref|YP_002496218.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium nodulans ORS 2060] gi|219945523|gb|ACL55915.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 236 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 108/205 (52%), Gaps = 3/205 (1%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 + W L+I FP + +TL +A + + +IG IA+ R ++ Sbjct: 6 RSNWQLLLIGQFPNGPLGGLAMTLILAVSAIAAAFVIGTLIALARTS-GHAVLQWPATVL 64 Query: 62 VWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V++ RG P ++ +F ++ LP IG F ++ +L L SAY+SEI+R+ I ++PKG Sbjct: 65 VYVVRGLPPVMAVFWAYFALPALIGRPIPGFWTLLAALILYESAYLSEILRAGIRALPKG 124 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQ 179 Q++AS A+G+ QT R I+LPQ T + S+F+S +K TS+ I + E+ F T Q Sbjct: 125 QFEASRALGMGYLQTTRDIVLPQVYYTMLPSMVSQFVSTIKETSLGYIIAVQELTFATNQ 184 Query: 180 RIVSTTYQPLIIYCELAFVYLILTS 204 +P ++ LA +Y + S Sbjct: 185 LNSQLLTRPFEVFMLLAVIYFAVCS 209 >gi|15675263|ref|NP_269437.1| hypothetical protein SPy_1315 [Streptococcus pyogenes M1 GAS] gi|13622436|gb|AAK34158.1| hypothetical protein SPy_1315 [Streptococcus pyogenes M1 GAS] Length = 724 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 51/146 (34%), Positives = 86/146 (58%), Gaps = 7/146 (4%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYI 106 + LI +V + RG PL++ IF+G+P++ + F+A I+L+LN AYI Sbjct: 553 LRLISTVFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGGAYI 612 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EI+R I ++P GQ +AS ++GL+ T+R +ILPQ + ++F+ LK T++ Sbjct: 613 AEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLKDTTIV 672 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIY 192 S I + E+FQT + I++ YQ +Y Sbjct: 673 SAIGLVELFQTGKIIIARNYQSFRMY 698 >gi|312963773|ref|ZP_07778244.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] gi|311281808|gb|EFQ60418.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] Length = 222 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 82/143 (57%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TP LVQLF IF+GLP +G+ + A ++++ +N AY +EIIR+ I +IP+G Sbjct: 60 YVELIRNTPFLVQLFFIFFGLPSLGLKITEWQAAVLAMVINLGAYSTEIIRAGIQAIPRG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+ +TR + RH++L + LSS+ I ++ ++V S I E+ A Sbjct: 120 QLEAAAALAMTRFEAFRHVVLLPALGKVWPALSSQIIIVMLGSAVCSQIATEELSFAANF 179 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I S ++ Y VYL + Sbjct: 180 IQSRNFRAFETYALTTLVYLCMA 202 >gi|257467277|ref|ZP_05631588.1| amino acid ABC transporter permease [Fusobacterium gonidiaformans ATCC 25563] gi|315918406|ref|ZP_07914646.1| amino acid transport system permease [Fusobacterium gonidiaformans ATCC 25563] gi|313692281|gb|EFS29116.1| amino acid transport system permease [Fusobacterium gonidiaformans ATCC 25563] Length = 224 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 100/170 (58%), Gaps = 3/170 (1%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII--ISLTLNFSAYIS 107 + I+S I Y+ I RGTP +VQL +I + +G + ++ + I+ I+ +N AY++ Sbjct: 52 NSKILSKIALVYIDIVRGTPAVVQL-MILANIIFVGALRETPILIVAGIAFGMNSGAYVA 110 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 EIIR+ I + KGQ +A A+GL+ QT++ +I+PQ + L SEFI++LK TS+ Sbjct: 111 EIIRAGIEGLEKGQTEAGRALGLSYAQTMKFVIIPQAVKKILPALVSEFITLLKETSIVG 170 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 I ++ ++A I S TY+ + + +YLILT+ ++ K+E + Sbjct: 171 FIGGVDLLRSANIITSQTYRGVEPLLAVGIIYLILTTIFTVLMRKVEKGL 220 >gi|213967000|ref|ZP_03395150.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301385184|ref|ZP_07233602.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302062752|ref|ZP_07254293.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302130125|ref|ZP_07256115.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928322|gb|EEB61867.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|331014303|gb|EGH94359.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 220 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 111/204 (54%), Gaps = 1/204 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 ++L+A + ++ + ++ V +IG ++ + + L + YV + RGTP+ V + Sbjct: 16 EVLWAGFLTSIQCSALAIVAGTLIGMLAGLV-LTYGGFFARLPIRLYVDLIRGTPVFVLV 74 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +FY +P +G +F A I LTL +++SEI+R ++ +IP+GQ +A AIGL Q Sbjct: 75 LAVFYMVPALGWHISAFQAGAIGLTLFCGSHVSEIVRGALQAIPRGQIEAGKAIGLRFNQ 134 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 T+R+++LPQ + + I+K++++ S I + E+ + Q++++ T+ L Y Sbjct: 135 TLRYVLLPQAMRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLF 194 Query: 195 LAFVYLILTSFCYIIQIKIESSVT 218 F++ ++ ++ IE V Sbjct: 195 AGFLFFLINYAIELLGRHIEKRVA 218 >gi|145635027|ref|ZP_01790733.1| arginine ABC transporter permease protein [Haemophilus influenzae PittAA] gi|260582108|ref|ZP_05849902.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Haemophilus influenzae NT127] gi|319776578|ref|YP_004139066.1| arginine transporter subunit [Haemophilus influenzae F3047] gi|145267635|gb|EDK07633.1| arginine ABC transporter permease protein [Haemophilus influenzae PittAA] gi|260094740|gb|EEW78634.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Haemophilus influenzae NT127] gi|317451169|emb|CBY87402.1| arginine transporter subunit [Haemophilus influenzae F3047] Length = 221 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 120/224 (53%), Gaps = 10/224 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + F L++ A ++TL +A S ++ L + AV+ ++ + M +V + RG Sbjct: 1 MFSDFLSLMFTAALMTLGLAVCSLLLGLFLSLIFAVLE---ANRFVGKPMTVFVALLRGL 57 Query: 69 PLLVQLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 P ++ + ++++G L I F +F + +L+L F+AY S+ +R +I +IPKGQ Sbjct: 58 PEIIVVLLVYFGSTELVEMLTGEYIEFGAFGCGVFALSLIFAAYASQTLRGAIQAIPKGQ 117 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W++ A+GL++ T HI++PQ + LS++++ +LK T++ S I + ++ + A I Sbjct: 118 WESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLMRQADLI 177 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + T+QP Y A +YL +T + K+E T+ V Sbjct: 178 NTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFERGVK 221 >gi|302542601|ref|ZP_07294943.1| ABC-type amino acid transport system, permease component [Streptomyces hygroscopicus ATCC 53653] gi|302460219|gb|EFL23312.1| ABC-type amino acid transport system, permease component [Streptomyces himastatinicus ATCC 53653] Length = 312 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 114/215 (53%), Gaps = 22/215 (10%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I +S V+ + +G +AV+R+ + + S I Y+W FRGTP+ VQL V F + Sbjct: 75 TIWITILSMVLGVALGIVLAVMRLS-KNPVTSSIAWGYIWFFRGTPVYVQLLVWF----N 129 Query: 84 IGIVFD-----------------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 +G+VF F+A ++ L LN +AY++EI R+ I S+ +GQ +A+ Sbjct: 130 LGLVFKYINIMPIYKDEWSDFMTPFLAALLGLGLNEAAYMAEICRAGIQSVDEGQTEAAQ 189 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G++ +T+R ++LPQ + P +EFI++LK+TS+ + ++ Q + + Sbjct: 190 ALGMSHAKTLRRVVLPQAMRVIVPPTGNEFINMLKTTSLVIAVQYWDLLQATSEVGQNSG 249 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + A YLILTS + Q +E + T Sbjct: 250 ATAEMLFLAAAWYLILTSVLSVGQYYLERYYARGT 284 >gi|156934641|ref|YP_001438557.1| arginine transporter permease subunit ArtM [Cronobacter sakazakii ATCC BAA-894] gi|156532895|gb|ABU77721.1| hypothetical protein ESA_02475 [Cronobacter sakazakii ATCC BAA-894] Length = 222 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 120/216 (55%), Gaps = 14/216 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D P+LL + +L + S ++L++ VI + ++ I+ Y+ +F GT Sbjct: 1 MLDYLPELL-KGLHTSLTLTAASIAVALVLSVIFTVI-LTLKTPVLVWIVRGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +++L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPSLQNSPWLWHVLSEPWLCALVALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW + A+G++RK T+ I+LP + S+E + + KSTS+A TIT+ E+ Sbjct: 119 EGQWQSCGALGMSRKDTL-AILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Q + TY ++++ +YLI+ ++ IE Sbjct: 178 QLLYGRTYD-VMVFGAAGVIYLIVNGLLTLLMRLIE 212 >gi|158321702|ref|YP_001514209.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus oremlandii OhILAs] gi|158141901|gb|ABW20213.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus oremlandii OhILAs] Length = 221 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 111/202 (54%), Gaps = 3/202 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M W I+++ P L A ++TL +A + SL+IG ++I ++F+ + ++ Sbjct: 1 MHIHW-EFIVNNIP-LYQKAALLTLKLAFFGILASLLIGMICSLI-LYFNVRWLKTLVKA 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLL+QL+ +++GL +GIV + II L+ +Y++E R + ++ K Sbjct: 58 YIELSRNTPLLIQLYFLYFGLTKVGIVLSENTSAIIGLSFLGGSYMAEAFRGGLEAVSKF 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q ++ ++GL++ Q +RHI++PQ I+ S + + I +LK TS+ I+ ++ + Sbjct: 118 QIESGLSLGLSKMQIVRHIMIPQAISFSVPAIGANCIFLLKETSIFGAISTLDLMNVTKD 177 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 ++ YQ L YLI+ Sbjct: 178 LIGMYYQTFDSLLMLVVAYLII 199 >gi|28869963|ref|NP_792582.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28853208|gb|AAO56277.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 220 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 111/204 (54%), Gaps = 1/204 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 ++L+A + ++ + ++ V +IG ++ + + L + YV + RGTP+ V + Sbjct: 16 EVLWAGFLTSIQCSALAIVAGTLIGMLAGLV-LTYGGFFARLPIRLYVDLIRGTPVFVLV 74 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +FY +P +G +F A I LTL +++SEI+R ++ +IP+GQ +A AIGL Q Sbjct: 75 LAVFYMVPALGWHISAFQAGAIGLTLFCGSHVSEIVRGALQAIPRGQIEAGKAIGLRFNQ 134 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 T+R+++LPQ + + I+K++++ S I + E+ + Q++++ T+ L Y Sbjct: 135 TLRYVLLPQAMRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLF 194 Query: 195 LAFVYLILTSFCYIIQIKIESSVT 218 F++ ++ ++ IE V Sbjct: 195 AGFLFFLINYAIELLGRHIEKRVA 218 >gi|322373495|ref|ZP_08048031.1| amino acid ABC transporter, permease protein [Streptococcus sp. C150] gi|321278537|gb|EFX55606.1| amino acid ABC transporter, permease protein [Streptococcus sp. C150] Length = 226 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 102/183 (55%), Gaps = 1/183 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A +TL IA + + S ++G ++VIR + I+S + Y+ + R TPLL+QLF +++ Sbjct: 16 AFFLTLHIAVLGIIGSFLLGLVVSVIR-HYRVPILSQLSTAYIELSRNTPLLIQLFFLYF 74 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP IG+V S ++ L +Y++E RS + ++ + Q + +IGLT Q R++ Sbjct: 75 GLPRIGLVLSSEACAVVGLIFLGGSYMAESFRSGLEAVSQTQHEVGLSIGLTPFQVFRYV 134 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + + S+ I ++K TSV S + + ++ A+ ++ Y+ + L Y Sbjct: 135 VLPQAVAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYETDVALGMLVVAY 194 Query: 200 LIL 202 L++ Sbjct: 195 LLM 197 >gi|320323221|gb|EFW79309.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320329748|gb|EFW85737.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330881453|gb|EGH15602.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 232 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 114/207 (55%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N+I DS P L + ++ TL + IS L+ + ++R + +++ Y ++ Sbjct: 5 YNVIWDSLP-LYFGGLLTTLKLLAISLAFGLLAALPLGLMR-GSKNPWVNMPAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +SF+ ++ T+N SAY +EII S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFDAVRESFLWPWLSSATFCACLAFTINTSAYTAEIIAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G+++ + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + Y P Y YL LT Sbjct: 183 AARTVNAQFYLPFEAYVTAGVFYLCLT 209 >gi|242239815|ref|YP_002987996.1| glutamine ABC transporter permease [Dickeya dadantii Ech703] gi|242131872|gb|ACS86174.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 219 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 120/205 (58%), Gaps = 5/205 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W ++I S PQLL A +TL I+ + + L+IG R++ + + I Sbjct: 1 MQFDW-SVIWPSIPQLLEGA-QMTLLISVLGLLGGLVIGVVAGFARVY-GGWLSNRIALV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ I RGTP+++Q+ I++ +P + + D A II++ +N AYI+EI R +++SI Sbjct: 58 FIEIIRGTPMVIQIMYIYFAIPMVLTSVRIDPVTAAIITIMINSGAYIAEITRGAVMSIH 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A A+GL+ + T+RH+I P + PL +++I +K TS+ I + E+ + A Sbjct: 118 KGFTEAGLALGLSHRATLRHVITPLALRRMLPPLGNQWIISIKDTSLCIVIGVSELTRQA 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT 203 Q I++ ++ L I A +YL++T Sbjct: 178 QEIIAGNFRALEILTATAIIYLVIT 202 >gi|283797387|ref|ZP_06346540.1| glutamine ABC transporter, permease protein [Clostridium sp. M62/1] gi|291075063|gb|EFE12427.1| glutamine ABC transporter, permease protein [Clostridium sp. M62/1] gi|295090529|emb|CBK76636.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Clostridium cf. saccharolyticum K10] gi|295115439|emb|CBL36286.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SM4/1] Length = 230 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 95/168 (56%), Gaps = 5/168 (2%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 I++ I + Y+ + RGTP+LVQL +I+Y + + D + +++ +N AY++EI RS Sbjct: 62 ILNFICNVYLTVIRGTPVLVQLLIIYY-VIFASVRIDKVLVAVLAFGINSGAYVAEIFRS 120 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I+SI GQ++A ++G QT+ +II+PQ L +EFI++LK TS+A I + Sbjct: 121 GIMSIDNGQFEAGRSLGFNYPQTMWYIIMPQAFKNVLPALCNEFIALLKETSIAGYIGLQ 180 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVY----LILTSFCYIIQIKIESS 216 ++ + I S TY + +A +Y LI T I++ ++ S Sbjct: 181 DLTKGGDIIRSRTYSAFMPLIAVALIYLAIVLIFTQLIKILERRLRQS 228 >gi|313497725|gb|ADR59091.1| Polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida BIRD-1] Length = 232 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 115/207 (55%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N++ ++ P + + ++ TL + IS L+ + ++R+ +I+L Y ++ Sbjct: 5 YNVVWEALP-MYFGGLLTTLKLLAISLFFGLLAAIPLGLMRVS-RQPVINLAAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDS-FVAIIISLT--------LNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +S F ++ S T +N SAY +EII S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFEAVRESIFWPLLSSATFCACLAFGINTSAYTAEIIAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G++R + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + Y P Y YL LT Sbjct: 183 AARTVNAQYYLPFEAYITAGVFYLCLT 209 >gi|257125489|ref|YP_003163603.1| polar amino acid ABC transporter inner membrane protein [Leptotrichia buccalis C-1013-b] gi|257049428|gb|ACV38612.1| polar amino acid ABC transporter, inner membrane subunit [Leptotrichia buccalis C-1013-b] Length = 521 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 113/217 (52%), Gaps = 16/217 (7%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-------------IISLIMHFYVWIFR 66 +VTL I+ V+ +IG +A+ R S+T I+ + Y+ +FR Sbjct: 293 GTLVTLFISITGTVVGFLIGLVVALFRHSESETDEQTQKYKKYGLKFINTLSSVYIAVFR 352 Query: 67 GTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 GTP++VQ VI+YGL + I VA + +++N AY+SEIIR I SI GQ++A+ Sbjct: 353 GTPMIVQSMVIYYGLSQVFNINLSPMVAALFIVSINTGAYMSEIIRGGIDSIDNGQFEAA 412 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 AIG+T Q ++ II PQ + +E I +K TSV + I++ E+F ++ + T Sbjct: 413 KAIGMTNFQLMQSIIFPQMFRNILPMIGNELIVNIKDTSVLNVISVTELFFISKSVAGTY 472 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVT--QH 220 + ++ + +Y LT +I +IE + QH Sbjct: 473 SRYYEVFIITSVIYFFLTFTLSLILKQIEKRIDGPQH 509 >gi|213971835|ref|ZP_03399937.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301383372|ref|ZP_07231790.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302064065|ref|ZP_07255606.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302134967|ref|ZP_07260957.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213923381|gb|EEB56974.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 221 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 109/204 (53%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F ++ + LL A+ TL + I ++ + +G AV+R + + I+ Sbjct: 1 MAYHFDFTPVLQNIDVLLRGALF-TLELTAIGTLLGVSLGIVGAVVRAWKIQPFAT-ILA 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TP LVQLF IF+GLP +G+ + A ++++ +N AY +EIIR+ I +IPK Sbjct: 59 IYVELIRNTPFLVQLFFIFFGLPSLGVQISEWQAAVLAMVINLGAYSTEIIRAGIQAIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +AS A+ + R + R+++L + LSS+ I ++ ++V S I E+ A Sbjct: 119 GQLEASAALAMNRYEAFRYVVLVPALGKVWPALSSQIIIVMLGSAVCSQIATEELSFFAN 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I S ++ Y +YL + Sbjct: 179 FIQSRNFRSFETYIVTTLIYLAMA 202 >gi|209551037|ref|YP_002282954.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536793|gb|ACI56728.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 222 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 114/205 (55%), Gaps = 3/205 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F + D P+LL+ ++ T+ +A ++L+IG R + + ++ Sbjct: 1 MGYTFDFGAVFDRAPELLWGSLG-TIWLALAGMALALVIGIIGVAARTSKIRLVRAPVIG 59 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 F V I R TP LVQ+F I++ LP +GI + V II+L +N AY EIIR + S+ K Sbjct: 60 F-VEIVRNTPFLVQIFFIYFALPLMGIRLNPTVTAIIALGINGGAYAIEIIRGGVESVSK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A +A+GL + R I+L + L+S+F+ + +TSV ++I E+ AQ Sbjct: 119 GQIEAGFALGLHKGDVFRLIVLKPALRAIYPSLTSQFVMLTLTTSVCTSIAAYELTSAAQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTS 204 RI S T++ +Y + +YL++++ Sbjct: 179 RIESDTFRSFEVYFSVTTIYLVIST 203 >gi|148560414|ref|YP_001259774.1| amino acid ABC transporter permease [Brucella ovis ATCC 25840] gi|148371671|gb|ABQ61650.1| amino acid ABC transporter, permease protein [Brucella ovis ATCC 25840] Length = 232 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 115/208 (55%), Gaps = 4/208 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++ F++I D++ L +T+ IA ++ +I IA++ + + I Sbjct: 1 MNFD-FSVIFDNW-TLFARGTWLTIVIAIVAIATGFLISIPIALMALSHRRPL-RWISSA 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV FR P +V L++ FYGLP +G+ + I+L S+Y +EIIR +I+++PKG Sbjct: 58 YVEWFRNIPFIVVLYLFFYGLPFMGVRLPESIVGTIALAFFASSYFAEIIRGAILAVPKG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ AIG++ Q + I+ PQT+ P ++ IS++K TSV STIT+ E+ Sbjct: 118 QMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETSVLSTITVAELTYQGLV 177 Query: 181 IVSTTYQPLIIYCELAFVYLILTS-FCY 207 I T+ P I+ A +Y ++T+ F Y Sbjct: 178 IQGETFAPFEIFLTTAAIYWMITAIFAY 205 >gi|330874082|gb|EGH08231.1| amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 221 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 108/204 (52%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F ++ + LL A+ TL + I ++ + +G AV+R + + I Sbjct: 1 MAYHFDFTPVLQNIDALLRGALF-TLELTAIGTLLGVSLGIVGAVVRAWKIQPFAT-IFA 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TP LVQLF IF+GLP +G+ + A ++++ +N AY +EIIR+ I +IPK Sbjct: 59 IYVELIRNTPFLVQLFFIFFGLPSLGVQISEWQAAVLAMVINLGAYSTEIIRAGIQAIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +AS A+ + R + R+++L + LSS+ I ++ ++V S I E+ A Sbjct: 119 GQLEASAALAMNRYEAFRYVVLVPALGKVWPALSSQIIIVMLGSAVCSQIATEELSFFAN 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I S ++ Y +YL + Sbjct: 179 FIQSRNFRSFETYIVTTLIYLAMA 202 >gi|284992301|ref|YP_003410855.1| polar amino acid ABC transporter inner membrane subunit [Geodermatophilus obscurus DSM 43160] gi|284065546|gb|ADB76484.1| polar amino acid ABC transporter, inner membrane subunit [Geodermatophilus obscurus DSM 43160] Length = 301 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 100/170 (58%), Gaps = 1/170 (0%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 PQ L A++ TL +A + V++ ++G ++V R+ + +++ + FR PLLV Sbjct: 62 PQALGQALLRTLQVAIVGMVLATVLGLVLSVGRLS-EHRWVRVVVTTSIEFFRAVPLLVL 120 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 +F +++ LP GI +F A++ L L +A ++EI R+ I+S+ +GQ +A+Y +G+ + Sbjct: 121 IFALYFLLPKFGIRLSAFWALVGGLVLYNAAVLAEIFRAGILSVDRGQREAAYGLGMRKT 180 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 Q + ++LPQ + L ++ + +LK TS+ I+ PE+ + A+ +V Sbjct: 181 QVMTLVLLPQAVRRMLPVLIAQLVVLLKDTSLGFIISFPELLRGARGLVE 230 >gi|322513410|ref|ZP_08066526.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Actinobacillus ureae ATCC 25976] gi|322120798|gb|EFX92668.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Actinobacillus ureae ATCC 25976] Length = 156 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 53/153 (34%), Positives = 93/153 (60%), Gaps = 2/153 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++++ P+ + AAI+ TL ++ ++SLI G IAVI + + + Y+ + R T Sbjct: 6 VVNAIPRFIDAAII-TLRLSVWGILLSLIFGLLIAVITAYHVKPF-NRLARGYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P L+QLF ++YGLP IGI +D F II+L ++Y++E +R+ ++++PKGQ +A+ AI Sbjct: 64 PQLIQLFFLYYGLPKIGIKWDGFTCGIIALVFLGTSYMAEALRAGLLTVPKGQTEAAKAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 GL R Q ++I PQ S + + + ++K Sbjct: 124 GLNRFQVFPYVIFPQAWAVSIPAIGANVLFLIK 156 >gi|73540164|ref|YP_294684.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134] gi|72117577|gb|AAZ59840.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134] Length = 242 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 18/205 (8%) Query: 1 MKYEW-FNLIIDSFPQ------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI 53 M Y W + + ++ Q + + + VT+ + S+VI+L IG + V+R + Sbjct: 1 MNYNWHWGVFLEQAAQNETYLDWMISGLKVTIALGLSSWVIALAIGSVLGVLRTV-PNKW 59 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLP----------HIGIVFDSFVAIIISLTLNFS 103 +S YV +FR PLLVQLF+ ++ P + F+A ++ L + Sbjct: 60 LSGFAAAYVELFRNIPLLVQLFIWYFVGPELLPGGETIKQMNPFTQQFLAAMLCLGTFTA 119 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 A + E +RS I S+P+GQ +A A+G T QT R ++LP PL+SEF++I K++ Sbjct: 120 ARVCEQVRSGINSLPRGQKNAGLAMGFTLPQTYRFVLLPMAFRVIVPPLTSEFLNIFKNS 179 Query: 164 SVASTITIPEIFQTAQRIVSTTYQP 188 +VASTI + E+ +++V T +P Sbjct: 180 AVASTIGLLELAAQGRQLVDYTARP 204 >gi|319782257|ref|YP_004141733.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168145|gb|ADV11683.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 313 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/220 (28%), Positives = 116/220 (52%), Gaps = 19/220 (8%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY---- 79 TL + + ++++++G IA++R+ S ++ YVW FRG P L+QL F Sbjct: 77 TLMLTAVIMILAIVVGTVIAIMRVSPSP-VLRAFAGLYVWFFRGVPALIQLIFWFNLSLL 135 Query: 80 ------GLPHIGIVFD--------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 +P +G +F F + +++L+L + Y++EIIR+ I S+P GQ +A+ Sbjct: 136 VREVSLTIPFVGTLFSVRTNDFMTPFFSAVVALSLCEAGYMAEIIRAGIKSVPSGQAEAA 195 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G+ + ++ I LPQ + P +E I++LK TS+ + I + ++F +AQ I + T Sbjct: 196 SALGMPYRMILKRITLPQAMRFVLPPTGNEAINLLKMTSLVTFIAVDDLFYSAQSIYART 255 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 ++ + + +AF YL + S + Q +E + D Sbjct: 256 FETIPLLIVVAFWYLAVVSIMSVGQHFLERHFGRSDTRRD 295 >gi|114707669|ref|ZP_01440564.1| amino acid ABC transporter, permease protein [Fulvimarina pelagi HTCC2506] gi|114536913|gb|EAU40042.1| amino acid ABC transporter, permease protein [Fulvimarina pelagi HTCC2506] Length = 235 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 109/195 (55%), Gaps = 12/195 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT +A + I L +GF +A+ + D ++ + + Y IFRG P L+ LF++++ Sbjct: 21 GVFVTGSLAVCTLPIGLAVGFLLALAKQS-GDRLLFISANIYTTIFRGLPELLTLFLVYF 79 Query: 80 GLPHI-----------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ ++ I SFV+ +I+L L FSAY SE+ ++ +IP+GQ++ + A+ Sbjct: 80 GVNNLLKSFSDATGLPDIALSSFVSGMIALGLVFSAYASEVFVAAFRAIPRGQYEGANAL 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+ T+R +I PQ + + LS+ ++ +LK T++ S I + +I + +Q T +P Sbjct: 140 GIGSFMTMRLVIFPQLVRIALPGLSNLWMILLKDTALVSVIGLTDILRQSQIAARVTREP 199 Query: 189 LIIYCELAFVYLILT 203 + + +YL+LT Sbjct: 200 FLFFGTAILLYLVLT 214 >gi|77456454|ref|YP_345959.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77380457|gb|ABA71970.1| amino acid ABC transporter membrane protein 2, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 209 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 106/185 (57%), Gaps = 3/185 (1%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 S PQL A TL I+ +S IS + G V+R + ++ ++ Y+ +FR P+L Sbjct: 2 SLPQLAKGA-GQTLSISFLSIAISTVGGVLYGVLRTL-NVRWLNALLRIYLELFRAIPVL 59 Query: 72 VQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 V L+++F+GLP G+ SF ++ L+L ++ + E+ R ++ S+P+GQ +A +IGL Sbjct: 60 VWLYLLFFGLPIFFGLSLPSFWCAVLVLSLWGASEVGEVARGALHSLPRGQREAGLSIGL 119 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 Q +++LPQ + P + + I+K++S+A I + ++ + Q+I+ TY+ ++ Sbjct: 120 NAAQLYGYVLLPQALKRMTPPTINVYTRIIKTSSLAVLIGVVDVIKVGQQIIERTYESVL 179 Query: 191 IYCEL 195 IY L Sbjct: 180 IYGAL 184 >gi|330815542|ref|YP_004359247.1| hypothetical protein bgla_1g05980 [Burkholderia gladioli BSR3] gi|327367935|gb|AEA59291.1| hypothetical protein bgla_1g05980 [Burkholderia gladioli BSR3] Length = 246 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 107/201 (53%), Gaps = 17/201 (8%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ ++VI+LI+G V+R D +S I YV IFR PL+VQ FV Sbjct: 26 LLSGFWVTIKVSLAAWVIALIVGSLFGVLRTV-QDRRLSAIGTLYVSIFRNIPLIVQFFV 84 Query: 77 IFYGLPHI--------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + +P + G F F A I+ L L A + E +RS I ++PKGQ Sbjct: 85 WYLVVPELLPASIGTWIKQLPPGTQF--FTASIVCLGLFTGARVCEQVRSGINALPKGQR 142 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A A+G T QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 143 AAGLAMGFTEWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLV 202 Query: 183 STTYQPLIIYCELAFVYLILT 203 T Q + + Y+I+ Sbjct: 203 DYTAQTYESFIAVTLAYVIIN 223 >gi|312797283|ref|YP_004030205.1| glutamate/aspartate transport system permease protein gltJ [Burkholderia rhizoxinica HKI 454] gi|312169058|emb|CBW76061.1| Glutamate/aspartate transport system permease protein gltJ [Burkholderia rhizoxinica HKI 454] Length = 246 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/176 (35%), Positives = 100/176 (56%), Gaps = 13/176 (7%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ ++VI+L +G + V+R + +S I YV +FR PL+VQ F+ ++ LP Sbjct: 33 TVAVSLCAWVIALFVGALMGVLRTM-PNKWLSGIGTVYVAVFRNIPLIVQFFIWYFVLPE 91 Query: 84 I-----GIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 I G F F A I+ L L +A + E +RS I ++P+GQ A A+G T Sbjct: 92 ILPPSIGTWFKQLPPNAQFFSASILCLGLFTAARVCEQVRSGIHALPRGQRAAGLALGFT 151 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 QT RH++LP PL+SEF++I K+++VASTI + ++ A+++V T Q Sbjct: 152 LPQTYRHVMLPVAFRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQ 207 >gi|241759295|ref|ZP_04757401.1| binding-protein-dependent transport system inner membrane protein [Neisseria flavescens SK114] gi|241320431|gb|EER56728.1| binding-protein-dependent transport system inner membrane protein [Neisseria flavescens SK114] Length = 248 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 27/191 (14%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVI------FYGLPHIGIV------------FDSFVAI 94 ++ I +YV +FRGTPL VQ+ + F+ P G++ + + +A Sbjct: 61 VLRKISFWYVTLFRGTPLFVQIVIWAYVWFPFFVHPADGVLISGEAAIDLRRSYGALIAG 120 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 ++L N AYI EI R+ I SI KGQ +A+ ++GLT Q +R++ILPQ + PL+S Sbjct: 121 SLALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYTQAMRYVILPQALRRMLPPLAS 180 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE----LAFVYLILTSFCYIIQ 210 EFI++LK +S+ S I + E+ Q ++ Y +Y E +A +YL+LTSF + Sbjct: 181 EFITLLKDSSLLSVIGVAEL-AYVQSTITGRYS---VYEEPLYTIALIYLVLTSFLGWVF 236 Query: 211 IKIESSVT-QH 220 +++ES QH Sbjct: 237 LRLESRYNPQH 247 >gi|227514605|ref|ZP_03944654.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum ATCC 14931] gi|227087016|gb|EEI22328.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum ATCC 14931] Length = 235 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 98/182 (53%), Gaps = 2/182 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +I S P + ++ TL ++ + V SLI+G +++++ FF ++ + YV I Sbjct: 19 WEVIQQSLP-MFEQGLIATLWLSAVGIVGSLIVGVIVSLVQ-FFRVPVLRQVCTVYVEIS 76 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL+QLF ++Y P IG+ ++ I+ L +Y++E + KGQ + Sbjct: 77 RNTPLLIQLFFLYYAFPVIGLKMNAVTCGIVGLIFLGGSYMAEGFTGGFAGVSKGQLETG 136 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 AIG+ + Q R+++ PQ S L++ I ++K TS+ S I IPE+ TA ++ Sbjct: 137 KAIGMNQWQLARYVVFPQGFALSMPALAANMIFLIKETSIFSVIAIPELTNTALDLIGLY 196 Query: 186 YQ 187 Y+ Sbjct: 197 YR 198 >gi|260912990|ref|ZP_05919475.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Pasteurella dagmatis ATCC 43325] gi|260632980|gb|EEX51146.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Pasteurella dagmatis ATCC 43325] Length = 223 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 121/220 (55%), Gaps = 14/220 (6%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH---FYVWIFRGTPLLV 72 L+Y+A ++TL +A V SLI+G ++++ + + I + + RG P ++ Sbjct: 8 LMYSATLMTLGLA----VCSLIVGLILSILFVILETSKWGGIRKPASVMIALLRGLPEIL 63 Query: 73 QLFVIFYGLPHI-----G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 + +I++G + G I F +F + +L++ F+AY S+ +R +I +IP GQW++ Sbjct: 64 VVLLIYFGSTEVVEMITGEFIQFSAFGCGVFALSIIFAAYASQSLRGAIQAIPLGQWESG 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL+R T HI++PQ + LS++++ +LK T++ S I + ++ + A+ + + T Sbjct: 124 AALGLSRSYTFVHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLMRQAELVNANT 183 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +QP Y A +YL +T +I K+E T+ V Sbjct: 184 HQPFTWYGIAALLYLAITLISQVIIRKLEYRFTRFERGVQ 223 >gi|309790934|ref|ZP_07685476.1| polar amino acid ABC transporter, inner membrane subunit [Oscillochloris trichoides DG6] gi|308227048|gb|EFO80734.1| polar amino acid ABC transporter, inner membrane subunit [Oscillochloris trichoides DG6] Length = 266 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 116/212 (54%), Gaps = 17/212 (8%) Query: 6 FNLIIDSFPQLLYAAIV----VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 F ++ D Q ++ I+ TL + +SF+ +LI G F+ + R+ S+ II + Y Sbjct: 40 FRIMTDPLHQGIFNTILQGLGTTLYVTAVSFIFALIFGLFLGLGRVA-SNPIIRNLTITY 98 Query: 62 VWIFRGTPLLVQLFVIFY----------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 + RG P+LV +F I + GL + I + II+L L + AYI+EI R Sbjct: 99 IEFIRGVPMLVLIFTISFAVVPLFAESFGLANNAISLTT--RAIIALVLIYGAYIAEIFR 156 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + I SI +GQ +A+ ++G++R Q + ++ILPQ + L ++ I++LK TS+ S + + Sbjct: 157 AGIESISRGQSEAARSLGMSRAQAMFYVILPQAVRNVMPALGNDLIALLKDTSLVSVLGV 216 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+ Q A+ VST+++ Y L YL +T Sbjct: 217 REMTQVARLSVSTSFRYEETYFILTLFYLSMT 248 >gi|242237844|ref|YP_002986025.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242129901|gb|ACS84203.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 326 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 108/200 (54%), Gaps = 24/200 (12%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-----------PHIGIVFDSF------- 91 + ++S + Y+W FRGTPLLVQL + +Y L P G F S+ Sbjct: 102 DNRLLSGLSGLYIWFFRGTPLLVQL-IFWYNLSTLFPTISLAIPITGPTFISWKTNDLIT 160 Query: 92 --VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 A I L LN +AY++EIIR+ ++S+ +GQ + + A G++R + +R II+PQ + Sbjct: 161 PLTAAIAGLALNEAAYMAEIIRAGLLSVDQGQIETTQAFGMSRVRALRRIIIPQAMRAII 220 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYII 209 P ++ IS++K+TS+ S I + ++ + Q I + T++ + + YL++TS + Sbjct: 221 PPTGNQLISMIKATSLVSVIAMGDLLYSVQAIYNRTFEIIPMLMVAVIWYLLITSILNVG 280 Query: 210 QIKIE---SSVTQHTYSVDK 226 Q IE + ++ T SV K Sbjct: 281 QSAIERYYARGSRRTVSVGK 300 >gi|104781753|ref|YP_608251.1| amino acid ABC transporter permease [Pseudomonas entomophila L48] gi|95110740|emb|CAK15453.1| putative amino acid ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 236 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 101/170 (59%), Gaps = 11/170 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLP-------HIGIVF---DSFVAIIISLTLNFSAYISEII 110 YV+ FRG+PLL QLF+++YGL +G+ + +++ +++ TLN +AY +EI Sbjct: 66 YVYFFRGSPLLAQLFLLYYGLGSLKGFWQDVGLWWFFREAWYCALLAFTLNTAAYQAEIF 125 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R+S++++ GQ++A+ A+ L R T ++LPQ++ + PL +E I ++K++++AS +T Sbjct: 126 RASLMAVAPGQYEAARALNLKRSTTFFKVVLPQSLLVAIGPLGNELIMMIKASAIASLVT 185 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I ++ + S ++ IY A +YL++ +E+ + +H Sbjct: 186 IYDLMGVTKLAFSRSFD-FQIYLWAAVLYLLIVELVRRTLKHLEARLGRH 234 >gi|266622948|ref|ZP_06115883.1| amino acid ABC transporter, permease protein [Clostridium hathewayi DSM 13479] gi|288865281|gb|EFC97579.1| amino acid ABC transporter, permease protein [Clostridium hathewayi DSM 13479] Length = 216 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/174 (32%), Positives = 106/174 (60%), Gaps = 9/174 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + +++ I ++ + SL +G FI+ R+ + +I I+ FY+ + RGTPL++QL V Sbjct: 10 LTGGMWISIQIFFVTLIFSLPLGLFISFGRMS-KNPVIRTIVKFYISVMRGTPLMLQLMV 68 Query: 77 IFYGLPH------IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 +++G P+ +G + + A I +N++AY +EI RS I S+P GQ++A+ +G Sbjct: 69 VYFG-PYYLFKIKVGNNYRLWAAFI-GFVINYAAYFAEIYRSGIQSMPVGQYEAAKLLGY 126 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++ QT II PQ + +++E I+++K TS+A TI++ E+F A+ + S+ Sbjct: 127 SKTQTFFRIIFPQVMKRILPSVTNEVITLVKDTSLAFTISVLEMFAVAKALASS 180 >gi|148826212|ref|YP_001290965.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae PittEE] gi|229846209|ref|ZP_04466321.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae 7P49H1] gi|148716372|gb|ABQ98582.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae PittEE] gi|229811213|gb|EEP46930.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae 7P49H1] Length = 221 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 120/224 (53%), Gaps = 10/224 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + F L++ A ++TL +A S ++ L + AV+ ++ + M +V + RG Sbjct: 1 MFSDFLSLMFTAALMTLGLAVCSLLLGLFLSLIFAVLE---ANRFVGKPMTVFVALLRGL 57 Query: 69 PLLVQLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 P ++ + ++++G L I F +F + +L+L F+AY S+ +R +I +IPKGQ Sbjct: 58 PEIIVVLLVYFGSTELVEMLTGEYIEFGAFGCGVFALSLIFAAYASQTLRGAIQAIPKGQ 117 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W++ A+GL++ T HI++PQ + LS++++ +LK T++ S I + ++ + A I Sbjct: 118 WESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLMRQADLI 177 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + T+QP Y A +YL +T + K+E T+ V Sbjct: 178 NTNTHQPFTWYGIAALIYLAVTLISQVGIQKLELRFTRFERGVK 221 >gi|119898555|ref|YP_933768.1| amino acid ABC transporter permease [Azoarcus sp. BH72] gi|119670968|emb|CAL94881.1| amino acid ABC transporter, permease protein [Azoarcus sp. BH72] Length = 222 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 3/193 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y++ F + D+ LL + TL + + V + +G A+ R + I Sbjct: 1 MAYQFDFAPVFDN-ADLLLSGAGFTLALTAVGAVFGIGLGILGAICRAW-KLAPFDRIFG 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TP LVQLF IF+GLP +G+ + A ++++ +N AY +EIIR+ I + P+ Sbjct: 59 VYVEVIRNTPFLVQLFFIFFGLPSLGVKMTEWQAAVLAMVINLGAYSTEIIRAGIQATPR 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ ++ LTR Q RH++L + L+S+ I ++ ++V S I E+ A Sbjct: 119 GQIEAAESLALTRSQIFRHVVLRPALAKVWPALTSQVIIVMLGSAVCSQIATEELTFAAN 178 Query: 180 RIVSTTYQPLIIY 192 I S ++ Y Sbjct: 179 FIQSRNFRAFETY 191 >gi|78065232|ref|YP_368001.1| ABC amino acid transporter, inner membrane subunit [Burkholderia sp. 383] gi|77965977|gb|ABB07357.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC transporter membrane protein [Burkholderia sp. 383] Length = 246 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 68/199 (34%), Positives = 108/199 (54%), Gaps = 13/199 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ +++VI+LI+G V+R + +S I YV IFR PL+VQ FV Sbjct: 26 LMSGFWVTIEVSLVAWVIALIVGSLFGVLRTV-PNKWLSAIGTLYVSIFRNIPLIVQFFV 84 Query: 77 IFYGLPH-----IGIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + +P IG F A II L L A + E +RS I ++PKGQ A Sbjct: 85 WYLVIPELLPASIGTWIKQLPPTTQFFTASIICLGLFTGARVCEQVRSGINALPKGQRAA 144 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 145 GLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDY 204 Query: 185 TYQPLIIYCELAFVYLILT 203 T Q + + Y+I+ Sbjct: 205 TAQTYESFIAVTLAYVIIN 223 >gi|29653827|ref|NP_819519.1| arginine transport system permease protein [Coxiella burnetii RSA 493] gi|29541090|gb|AAO90033.1| arginine transport system permease protein [Coxiella burnetii RSA 493] Length = 223 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 130/226 (57%), Gaps = 17/226 (7%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI---MHFYVWIF 65 I+ +PQLL +++V+T+ + + +L++G F+A + FS++ S + ++ +V+I Sbjct: 3 ILQYWPQLL-SSVVITIEL----MLSALVLGLFLAALLTVFSESGFSFLEAPVNVFVFII 57 Query: 66 RGTPLLVQLFVIFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQ+F+I+YG ++ F II+L +N SAY + ++R +I S Sbjct: 58 RGTPLLVQIFIIYYGSGQFHWLRETILWSVLKRPFGCAIIALAINTSAYTTVLLRGAIRS 117 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP G+ +A+ A+GL+R + + II+P+ I S+E I ILK TS+A TIT+ +I Sbjct: 118 IPTGEIEAAKALGLSRWKAYQRIIIPRAIRIVLPAYSNEVIMILKGTSLAGTITLMDIMG 177 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 + +++ TY+ + ++ +Y +L + + +E +T Y Sbjct: 178 VTRHLIAMTYEVIPLFFLAGIIYFVLNALIMSVFYFLEKKLTFQYY 223 >gi|270262830|ref|ZP_06191101.1| transporter [Serratia odorifera 4Rx13] gi|270043514|gb|EFA16607.1| transporter [Serratia odorifera 4Rx13] Length = 234 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 66/196 (33%), Positives = 110/196 (56%), Gaps = 11/196 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + VTL + S V+ ++ +AV R+ S + + + Y +IFRGTPL VQL V Sbjct: 20 FTGVAVTLWLLISSVVMGGLLAIPMAVARVS-SISWVRFPVWLYTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F I++LTLN AY +EI +I ++P G+ +A+ A Sbjct: 79 YSGMYSLEIVRGTDFLNAFFRSGLNCTILALTLNTCAYTTEIFAGAIRAVPHGEIEAASA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G +R + R IILP + T+ S+E I +L ST++A T T+P++ + A+ I + TYQ Sbjct: 139 YGFSRFKMYRCIILPSALRTALPAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQ 198 Query: 188 PLIIYCELAFVYLILT 203 P + A +YL ++ Sbjct: 199 PFYAFGIAAVLYLAIS 214 >gi|121609555|ref|YP_997362.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121554195|gb|ABM58344.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 216 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 117/200 (58%), Gaps = 1/200 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L AA+ TL ++ ++FV I+G +A+ R+ + + Y+ +F+ TPLL+ LF+ Sbjct: 13 LLAAMRWTLGLSVLAFVCGGIVGLVLALARVA-PVAPLRWLAAGYIQLFQATPLLMLLFL 71 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +F+GL + +F+++ I+LT SAY EI R SI S+P+ QW S A+G + + + Sbjct: 72 VFFGLALFDLGQSAFLSVTIALTCYASAYFGEIWRGSIQSVPQTQWQGSAALGFSYLEQM 131 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 RH++LPQ++ + P + ++K+TS+AS I + E+ AQ + + T +P+++Y + Sbjct: 132 RHVVLPQSVRIATPPTVGFMVQLVKNTSLASIIGMHELAHAAQYVNNVTLRPILVYGVVG 191 Query: 197 FVYLILTSFCYIIQIKIESS 216 +Y + Y++ ++E Sbjct: 192 AMYFAVCWPLYMLSRRLEKK 211 >gi|169631316|ref|YP_001704965.1| amino acid ABC transporter permease [Mycobacterium abscessus ATCC 19977] gi|169243283|emb|CAM64311.1| Putative amino acid ABC transporter, permease protein [Mycobacterium abscessus] Length = 293 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 115/224 (51%), Gaps = 23/224 (10%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 AA+ +TL + V+ ++G +A R+ + ++ I YVWIFR PL+VQL F Sbjct: 72 AALWLTLRLTFYGTVLGFLLGVALAAARLS-KNPVLQAISWTYVWIFRSIPLIVQLLFWF 130 Query: 79 ----------YGLPHIGIVF--------DSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +G+P +F A +I LTL+ AY +EIIR I+S+ +G Sbjct: 131 NIAYLYDTIGFGIPFGPALFTVDTNELLSGLTAAVIGLTLHQGAYFAEIIRGGILSVDEG 190 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+G+ R++ I+LPQ + + ++E IS++K TS+ ST+ I ++F Q Sbjct: 191 QLEAAAALGIPRRRQFFRIVLPQAMRSVMPNAANEVISLVKGTSIVSTMAIADLFYQVQV 250 Query: 181 IVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 I + PL++ Y+++TS ++Q IE + + Sbjct: 251 IFGRNGRVVPLLMVATA--WYIVITSVLTVVQYYIERHYARGAH 292 >gi|66046174|ref|YP_236015.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63256881|gb|AAY37977.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] Length = 219 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 113/208 (54%), Gaps = 6/208 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M L+ S PQL+ A TL I+ ++ V S I G V+R + + + Sbjct: 1 MASSGLELLWVSAPQLITGA-GRTLGISLLAIVFSSIGGVGYGVLR-SLGKRWLEVPLRI 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ +FR P+LV L++ F+GLP +G+ +F ++ L+L ++ + E++R + SIP+ Sbjct: 59 YLELFRAIPVLVWLYLFFFGLPIFLGVSIPAFWCAVLVLSLWGASEVGEVVRGGLRSIPR 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A AIGL Q ++LPQ + P+ + + ++K++S+A I + ++ + Q Sbjct: 119 GQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVVDVTKVGQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCY 207 +I+ TY+ ++IY F++L CY Sbjct: 179 QIIERTYESVLIY---GFLFLFFFIVCY 203 >gi|317049371|ref|YP_004117019.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316950988|gb|ADU70463.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 216 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 110/197 (55%), Gaps = 6/197 (3%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLI--IGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +I + P+L + ++ + S V ++ +G F+ + R + I I YV + R Sbjct: 7 VIAALPELGHGLLMTLVLTVLASMVSVVMGQLGCFLQLRRAW----IWRFIGRLYVSLMR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTP +VQLFV+F+ LP +G+ +A ++++ LN AY++EI+R + + +GQ +A+ Sbjct: 63 GTPAIVQLFVVFFTLPRLGLGGQPMLAAVVAIGLNSGAYVAEILRVNRSLVTRGQLEAAR 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +GL+R T ++I PQ + S L +EF +LK+T +AS + + E+ Q +++ TY Sbjct: 123 TLGLSRALTWWYVINPQVMRASLPMLVNEFTILLKTTPLASVVALTELTYAGQIVIARTY 182 Query: 187 QPLIIYCELAFVYLILT 203 + +A YL++ Sbjct: 183 DATQVLLLVAAGYLVIA 199 >gi|194016486|ref|ZP_03055100.1| L-cystine transport system permease protein TcyL [Bacillus pumilus ATCC 7061] gi|194011959|gb|EDW21527.1| L-cystine transport system permease protein TcyL [Bacillus pumilus ATCC 7061] Length = 253 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 121/208 (58%), Gaps = 10/208 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++W ++ FP++L +A+ TL I + +I +GF +A RI ++ + YV Sbjct: 5 FKW-EYVVTLFPKVL-SALPTTLLIVLFATLIGSFLGFILAYFRIE-RIPVLHQLSAIYV 61 Query: 63 WIFRGTPLLVQLFVIFYGLPH----IGI---VFDSFVAIIISLTLNFSAYISEIIRSSII 115 RGTP+LVQ+F++FYGLP IG+ +++ + + I+ LN +AY SEI RS++ Sbjct: 62 SFIRGTPILVQMFIVFYGLPGVLATIGLDISMWNKLIFLYITYGLNTAAYFSEIFRSALS 121 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+P Q++A+ +IGLT+ Q R ++PQ + + +++L++TS+A T+ + +I Sbjct: 122 SVPASQYEAAASIGLTKWQIYRRTLIPQAGKIALPNIGVAIVNLLQNTSLAFTLGVMDII 181 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 Q + + Y+ L Y A ++++L+ Sbjct: 182 GKVQTLGALYYRVLEGYFIAAVIFIMLS 209 >gi|127514093|ref|YP_001095290.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella loihica PV-4] gi|126639388|gb|ABO25031.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella loihica PV-4] Length = 226 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 60/168 (35%), Positives = 97/168 (57%), Gaps = 13/168 (7%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVF-----DSFVAIIISLTLNFSAYISEIIRSS 113 + YV + RGTP++VQL ++++ IV D A II+ LN AYISEIIR+ Sbjct: 65 NLYVGVIRGTPVVVQLVILYF------IVLATWDVDKVSAAIIAFGLNSGAYISEIIRAG 118 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++ KGQ +A+ ++GL++ T++ +ILPQ I L +EFI +LK T+V I + Sbjct: 119 IQAVDKGQTEAARSLGLSQAVTMKEVILPQAIKNILPALGNEFIVLLKETAVIGFIGGVD 178 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQH 220 + ++ + I S T++ + A +YL LT SF +++ K E + Q Sbjct: 179 LMRSGEIIRSRTFEDSVPLFTCALIYLALTYSFTFMLS-KFEKRLKQS 225 >gi|294793251|ref|ZP_06758397.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Veillonella sp. 6_1_27] gi|294456196|gb|EFG24560.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Veillonella sp. 6_1_27] Length = 238 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 116/202 (57%), Gaps = 9/202 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 KY + +I +FPQLL + VT+ I IS ++ +I+G IA+IR+ + L + F Sbjct: 3 KYFDVSYMIQAFPQLL-NYVHVTVLITVISAILGVILGSIIAIIRLKKVPVLNQLFIVF- 60 Query: 62 VWIFRGTPLLVQLFVIFYGLP----HIGIVFDSFVAIIIS---LTLNFSAYISEIIRSSI 114 + RGTP LVQLF+I++G+P H+G + ++ TL+ + Y +EI+RSSI Sbjct: 61 ISFMRGTPFLVQLFLIYFGVPEIMSHMGFNMRNVPGLVFVYAVFTLHIAGYSAEIMRSSI 120 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ G+ +A+ ++G+T Q+ IILPQ T S PL++ I +LK T++ + + ++ Sbjct: 121 DAVAPGEKEAAKSLGMTEFQSYVRIILPQAFTMSIPPLTNLVIGMLKGTALIFNVGVVDM 180 Query: 175 FQTAQRIVSTTYQPLIIYCELA 196 + A + + + L ++ + A Sbjct: 181 MRKADLMGGNSQRYLELFVDAA 202 >gi|255262995|ref|ZP_05342337.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Thalassiobium sp. R2A62] gi|255105330|gb|EET48004.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Thalassiobium sp. R2A62] Length = 267 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 68/186 (36%), Positives = 113/186 (60%), Gaps = 6/186 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL-IMHFYVWIFRGTPLLVQLFVIF 78 + VT+ ++ +SF + ++G IA++R+ S ++ + Y+ R PLLV L++ + Sbjct: 70 GLWVTIVLSVVSFTFATVLGLGIALLRL--SGLVVGKGVAIGYLEFIRNIPLLVLLYLFY 127 Query: 79 YGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 Y L P G FD + A +++L + SA ISEI R+ I S+ KGQW+A+ +IG++R Q R Sbjct: 128 YVLGPVFG--FDRWSAAVLTLGVFHSALISEIFRAGINSVDKGQWEAAASIGMSRGQAYR 185 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 +IILPQ++ PL EF+ ++KS+++ S I + E+ + I+S TY I+ +A Sbjct: 186 YIILPQSVRFMLPPLFGEFVHLIKSSAIVSVIAVAELTTIGRNIISDTYMSFEIWFTIAA 245 Query: 198 VYLILT 203 VYL LT Sbjct: 246 VYLALT 251 >gi|187779945|ref|ZP_02996418.1| hypothetical protein CLOSPO_03541 [Clostridium sporogenes ATCC 15579] gi|187773570|gb|EDU37372.1| hypothetical protein CLOSPO_03541 [Clostridium sporogenes ATCC 15579] Length = 221 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 84/132 (63%), Gaps = 7/132 (5%) Query: 62 VWI--FRGTPLLVQLFVIFYGL----PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 +W+ FRGTPL+ QLF +++G+ P + + D+ A II L N SAY+SE +R +I Sbjct: 57 IWVSFFRGTPLIAQLFFLYFGIVQLIPSLKNM-DAMTAAIIGLGFNASAYMSETLRGAIS 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ KGQ +AS +IG+T Q+++ I+ PQ + LS+ F+ I+K +++A T+ + EI Sbjct: 116 SVDKGQIEASLSIGMTPIQSMKRIVFPQAARVALPALSNSFVDIIKGSALAFTLGVVEIM 175 Query: 176 QTAQRIVSTTYQ 187 AQ +++Y+ Sbjct: 176 AVAQSEGASSYR 187 >gi|317047527|ref|YP_004115175.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316949144|gb|ADU68619.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 222 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 117/216 (54%), Gaps = 14/216 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ P+LL + +L + S + +L++ V+ + +++ I+ Y+ +F GT Sbjct: 1 MLQYLPELL-KGLHTSLTLTVASLIAALVLSLLFTVV-LALKVPVVNAIVKGYITVFTGT 58 Query: 69 PLLVQLFVIFYG---------LPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG LP + ++ ++ +++L+LN +AY +++ ++ +IP Sbjct: 59 PLLVQIFLIYYGPGQFPSIQNLPWLWHLLSQPWLCALLALSLNSAAYTTQLFYGAVRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQW + A+G+ RK T+R I+LP + S+E + + KSTS+A TIT+ E+ Sbjct: 119 SGQWQSCAALGMNRKDTLR-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Q + TY + ++ VYL + ++ IE Sbjct: 178 QLLYGRTYD-VTVFAAAGLVYLCVNGLLTLMMRLIE 212 >gi|260587478|ref|ZP_05853391.1| polar amino acid uptake family ABC transporter, permease protein [Blautia hansenii DSM 20583] gi|260541743|gb|EEX22312.1| polar amino acid uptake family ABC transporter, permease protein [Blautia hansenii DSM 20583] Length = 215 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 114/202 (56%), Gaps = 14/202 (6%) Query: 29 CISFVISLIIGFFIAVIRIFFSDTIISL---IMHFYVWIFRGTPLLVQLFVIFYG---LP 82 C+ F ++L++ + ++ F + I L I+ FY+ + RGTPL++QL V +Y L Sbjct: 18 CLIFFMTLVLSLPLGLVMYFGRVSKIKLVSGIVKFYISVMRGTPLMLQLLVWYYAPYYLW 77 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + I AI++ +LN++AY +EI RS I +IP+GQ++A+ +G + +QT IILP Sbjct: 78 GMNIGGYKLTAILLGCSLNYAAYFAEIYRSGIEAIPRGQYEAAAILGYSGQQTFFRIILP 137 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTYQPLIIYCELAFVYL 200 Q I +++E I+++K TS+ +++ E+F A++I + TT P I AF Y+ Sbjct: 138 QMIKNVLPTVTNEVITLVKDTSLVYSLSYVEMFAVAKQIAAAQTTIVPFFI--AGAFYYI 195 Query: 201 ILTSFCYIIQIKIESSVTQHTY 222 F YI+ +E + Y Sbjct: 196 ----FNYIVAKVMEMFEKKMNY 213 >gi|111023903|ref|YP_706875.1| glutamate transport system permease protein GluC [Rhodococcus jostii RHA1] gi|110823433|gb|ABG98717.1| glutamate transport system permease protein GluC [Rhodococcus jostii RHA1] Length = 215 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 109/196 (55%), Gaps = 3/196 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D F L+ VTL + +S V++LI G +A R+ ++ I YV FR Sbjct: 4 VVDHFGALM-EGFAVTLTLIGVSTVLALIGGTILASFRVS-PIPLLQSIGSGYVETFRNV 61 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P V F+ + P +GI F A + +L + +SA+ E +RS I +IP GQ++A +I Sbjct: 62 PTAVIYFMTLFAFPQLGIKIPFFWAAVAALAIYYSAFFCEAVRSGINAIPVGQFEAGRSI 121 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT ++R+I+LPQ + PL + FI++ KS+++AS + E+ A+ +++ Q Sbjct: 122 GLTFGGSLRYIVLPQAFRSVVPPLINVFIALTKSSAIASAFGVAELLTRAEGVIAEESQA 181 Query: 189 LI-IYCELAFVYLILT 203 ++ I + +YL++T Sbjct: 182 VLWILAATSLLYLVIT 197 >gi|28899840|ref|NP_799445.1| putative amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD 2210633] gi|153839888|ref|ZP_01992555.1| ABC-type glutamine transport system, permease component [Vibrio parahaemolyticus AQ3810] gi|260361994|ref|ZP_05774999.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|260876519|ref|ZP_05888874.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|260897424|ref|ZP_05905920.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|260901309|ref|ZP_05909704.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|28808092|dbj|BAC61329.1| putative amino acid ABC transporter, permease protein [Vibrio parahaemolyticus RIMD 2210633] gi|149746596|gb|EDM57584.1| ABC-type glutamine transport system, permease component [Vibrio parahaemolyticus AQ3810] gi|308087918|gb|EFO37613.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|308090376|gb|EFO40071.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|308109853|gb|EFO47393.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|308114174|gb|EFO51714.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus K5030] Length = 246 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/199 (29%), Positives = 108/199 (54%), Gaps = 9/199 (4%) Query: 2 KYEWFNLIIDSFPQ-------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII 54 Y+W ++D + L A T+ ++ +S ++ +G IA+ + S T+ Sbjct: 19 DYQWGWYVLDPSTEQGITNLKFLVAGFNDTIQVSLLSMCFAMTLGLLIALPALSRSPTL- 77 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + YV + R P+LV L ++YG+P + + + F A +I+LT+ SA+++E+ R Sbjct: 78 KWMNRIYVEVIRSIPVLVLLLWVYYGMPTLLDVSLNHFWAGVIALTIAESAFMAEVFRGG 137 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I +I +GQ +A+ ++GL Q +R +ILPQ PL ++F+ +LK +S+ S I + + Sbjct: 138 IQAINRGQHEAAESLGLNYWQKMRLVILPQAFRQILPPLGNQFVYVLKMSSLVSVIGLSD 197 Query: 174 IFQTAQRIVSTTYQPLIIY 192 + + A +V Y PL IY Sbjct: 198 LTRRANELVVNEYLPLEIY 216 >gi|78358109|ref|YP_389558.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220514|gb|ABB39863.1| amino acid ABC transporter membrane protein 2, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 292 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 121/232 (52%), Gaps = 29/232 (12%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P LL ++ T+ ++ + +++++ G + R+ S + ++ YV R P LV Sbjct: 58 PNLLVQGLLTTIRLSIWATLLAVVFGTLAGLARVSRSR-LRRMLARTYVESVRNLPPLVL 116 Query: 74 LFVIFY-----GLPHIGI-----------------------VFDSFVAIIISLTLNFSAY 105 +F+ ++ +P G+ +F A +++L + AY Sbjct: 117 VFIFYFFVSSQVMPATGLEDALYRLSPLQQRIVEFLLGPLPAVSAFTAGVLTLAIYEGAY 176 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 I+EI+R+ + S+P+GQW+AS ++G R +R +I PQ + PL+ +FIS +K +++ Sbjct: 177 IAEIVRAGVESVPRGQWEASASLGFGRFDMLRLVIFPQALKVIIPPLAGQFISTIKDSAI 236 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 S I++ E+ ++++T++ ++ +A +YL+LT FC ++ K+E+ + Sbjct: 237 VSVISVQELTFQGLELMASTFRTFEVWTTIALLYLMLTLFCSLLARKVEARL 288 >gi|322831961|ref|YP_004211988.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321167162|gb|ADW72861.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 237 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 11/196 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S VI ++ +AV R+ S+ + + Y +IFRGTPL VQL V Sbjct: 20 FTGLAITLWLLISSVVIGGLLAVPMAVGRVS-SNKFLRYPIWLYTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F I++LTLN AY +EI +I ++P G+ +A+ A Sbjct: 79 YSGMYSLEIVRGTDFLNAFFRSGLNCTILALTLNTCAYTTEIFAGAIRAVPHGEIEAANA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G +R + IILP + T+ S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSRFKLYTCIILPSALRTALPAYSNEVILMLHSTALAFTATVPDVLKIARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILT 203 P + A +YL ++ Sbjct: 199 PFYAFGIAAVIYLCVS 214 >gi|323529860|ref|YP_004232012.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323386862|gb|ADX58952.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 216 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 66/208 (31%), Positives = 115/208 (55%), Gaps = 8/208 (3%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFR 66 + P LL+AA+ T+ ++ + L IGFF+AV + YV+ FR Sbjct: 8 LQGMPLLLHAALA-TIGVS----LTGLFIGFFVAVGVCAARLSGNRAARRFGGAYVFFFR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G P+LVQL +++Y LP GI VA + +++L ++YI+EI+R +SIP G +A+ Sbjct: 63 GVPMLVQLLLVYYLLPFAGINVSPLVAAVSAVSLCSASYIAEILRGGFLSIPPGHIEAAR 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +GL+ T+R I++PQ + L +E + ++K++S+ S + + E+ +TAQ I ++TY Sbjct: 123 MLGLSPFDTLRRILVPQAFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNIAASTY 182 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIE 214 +PL Y +Y ++ +I E Sbjct: 183 RPLEAYLAAGLIYFVICGALALIAHAAE 210 >gi|328471192|gb|EGF42094.1| putative amino acid ABC transporter permease [Vibrio parahaemolyticus 10329] Length = 246 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 109/199 (54%), Gaps = 9/199 (4%) Query: 2 KYEWFNLIID-------SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII 54 Y+W ++D + + L A T+ ++ +S ++ +G IA+ + S T+ Sbjct: 19 DYQWGWYVLDPSTEQGIANLKFLVAGFNDTIQVSFLSMCFAMTLGLLIALPALSRSPTL- 77 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + YV + R P+LV L ++YG+P + + + F A +I+LT+ SA+++E+ R Sbjct: 78 KWMNRIYVEVIRSIPVLVLLLWVYYGMPALLDVSLNHFWAGVIALTIAESAFMAEVFRGG 137 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I +I +GQ +A+ ++GL Q +R +ILPQ PL ++F+ ILK +S+ S I + + Sbjct: 138 IQAINRGQHEAAESLGLNYWQKMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLSD 197 Query: 174 IFQTAQRIVSTTYQPLIIY 192 + + A +V Y PL IY Sbjct: 198 LTRRANELVVNEYLPLEIY 216 >gi|289624565|ref|ZP_06457519.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330866227|gb|EGH00936.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 232 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 92/163 (56%), Gaps = 9/163 (5%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTL 100 + +++ Y ++ RGTP+LVQLF+I+YGL V +SF+ ++ T+ Sbjct: 47 KNPWVNMPAWLYTYVIRGTPMLVQLFLIYYGLAQFDAVRESFLWPWLSSATFCACLAFTI 106 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N SAY +EII S+ + P G+ +A+ A+G+++ + R I+LP + + S+E I +L Sbjct: 107 NTSAYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMML 166 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++TS+AS +T+ +I A+ + + Y P Y YL LT Sbjct: 167 QTTSLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLT 209 >gi|302545137|ref|ZP_07297479.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces hygroscopicus ATCC 53653] gi|302462755|gb|EFL25848.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces himastatinicus ATCC 53653] Length = 216 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 104/190 (54%), Gaps = 9/190 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLI 57 MK++W ++ D PQL + +++TL + +++ +G A+ F ++ + Sbjct: 1 MKWDW-DVARDFLPQLGHG-LLITLEATALGSILAFALGLVWAMAFRSPSRFVKWPVAAV 58 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 F R TPLLVQLF FY LP I F + +I+L L++S Y +E+ R+ I + Sbjct: 59 TEF----IRNTPLLVQLFFFFYVLPTWDIKFSALTTGVIALGLHYSTYTAEVYRAGIDGV 114 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQW+A+ A+ L+R +T + +ILPQ I L + I++LK + + + I + ++ Q Sbjct: 115 PVGQWEAATALSLSRGRTWQAVILPQAIRRVVPALGNYVIAMLKDSPMLALIGVVDMLQK 174 Query: 178 AQRIVSTTYQ 187 A+ S+++ Sbjct: 175 ARGEASSSFH 184 >gi|300716052|ref|YP_003740855.1| arginine 3rd transport system permease [Erwinia billingiae Eb661] gi|299061888|emb|CAX59004.1| Arginine 3rd transport system permease protein [Erwinia billingiae Eb661] Length = 222 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 118/216 (54%), Gaps = 14/216 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ P+LL + +L + S +++L+ VI + ++ L++ Y+ +F GT Sbjct: 1 MLSYLPELL-KGLHTSLTLTVASLILALVFALIFTVI-LSLKVPVLRLVVRGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P I ++ ++ +++L+LN +AY +++ ++ +IP Sbjct: 59 PLLVQIFLIYYGPGQFPSIQAIPWLWHLLSQPWLCALLALSLNSAAYTTQLFYGAMRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQW++ A+G+ RK+T+R I+LP + S+E + + KSTS+A TIT+ E+ Sbjct: 119 AGQWESCAALGMNRKETLR-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Q + TY + ++ +YL + ++ IE Sbjct: 178 QLLYGRTYD-VTVFAAAGLIYLCVNGLLTLMMRIIE 212 >gi|295426473|ref|ZP_06819123.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus amylolyticus DSM 11664] gi|295063841|gb|EFG54799.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus amylolyticus DSM 11664] Length = 213 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 103/180 (57%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + I+ + SLI+G F A++ + + +I H Y+ +FR PLLV + + + +P Sbjct: 19 TILCSVIALIFSLILGIFFAMLEVA-PPKFVRIIAHIYIEVFRNIPLLVIVMIFYLIVPR 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 F + I LTL SA+I+E +RS I SI +GQ + + + G+T Q +R++ILPQ Sbjct: 78 FFFKLSGFQSGTIGLTLYTSAFIAETVRSGINSIGEGQMEGARSNGMTYIQAMRYVILPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + PL ++F++++K++SV + + ++ AQ I ++Q + Y + YL+LT Sbjct: 138 AMKIVIPPLGNQFVNLIKNSSVLAFVAGFDLMYQAQLIAFASFQTIDTYIVVGLFYLVLT 197 >gi|197264568|ref|ZP_03164642.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197242823|gb|EDY25443.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 235 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 115/216 (53%), Gaps = 11/216 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S V+ ++ +AV R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLISSVVMGGLLAVILAVGRVS-SNKFIRFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTDLLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 P + A +YL+++ + + E QH S Sbjct: 199 PFTAFGIAAVLYLLISYILISLFRRAERRWLQHVSS 234 >gi|308186011|ref|YP_003930142.1| ABC transport system, permease protein [Pantoea vagans C9-1] gi|308056521|gb|ADO08693.1| putative ABC transport system, permease protein [Pantoea vagans C9-1] Length = 315 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 118/225 (52%), Gaps = 22/225 (9%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VTL + +S ++ ++G + V R+ + ++ + Y+W FRGTPLLVQL + +Y Sbjct: 72 GLQVTLGLTVVSMILGTLLGLLLGVWRLS-ENRLLRGVAGLYIWFFRGTPLLVQL-IFWY 129 Query: 80 GL-----------PHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIISIPK 119 L P I S+ A I L LN +AY++EIIR+ ++S+ Sbjct: 130 NLSTLFPALSLTLPWSSITLASWNTNDLITPLTAAIAGLALNEAAYMAEIIRAGLLSVDN 189 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ + + A G++R + +R II+PQ + + P ++ IS++K+TS+ S I + ++ + Q Sbjct: 190 GQVETTQAFGMSRSRALRRIIIPQAMRSIIPPTGNQLISMIKATSLVSVIAMGDLLYSVQ 249 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 I + T++ + + YL++TS + Q IE + T V Sbjct: 250 AIYNRTFEIIPMLMVAVIWYLLITSILNLGQSAIERYYARGTRRV 294 >gi|238759068|ref|ZP_04620238.1| Histidine transport system permease protein hisQ [Yersinia aldovae ATCC 35236] gi|238702745|gb|EEP95292.1| Histidine transport system permease protein hisQ [Yersinia aldovae ATCC 35236] Length = 228 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/229 (27%), Positives = 116/229 (50%), Gaps = 15/229 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D + +L++ +VTL +A S ++S++IG A ++ S+ ++S + Y + RG Sbjct: 1 MLDGYSKLIFEGALVTLELALSSVLLSVVIGLMGAGGKLS-SNRLLSGLFECYTTLIRGV 59 Query: 69 PLLVQLFVIFYGL-----------PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 P LV + +IFYGL I D A II+L + AY +E R + +++ Sbjct: 60 PDLVLMLLIFYGLQITLNSITEFFGFAQINIDPLSAGIITLGFIYGAYFTETFRGAYMAV 119 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P+GQ +A+ A G T Q R I+ P + + + + + ILK+T++ S + + ++ + Sbjct: 120 PRGQIEAAIAFGFTSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKA 179 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 Q TYQP VYLI T+ + + +E ++++ V + Sbjct: 180 TQLAGKGTYQPFFFALVAGAVYLIFTTLSNGVLLWLER---RYSHGVKR 225 >gi|330960458|gb|EGH60718.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 232 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 115/207 (55%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N+I ++ P L + ++ TL + IS L+ + ++R+ + ++L Y ++ Sbjct: 5 YNMIWENLP-LYFGGLLTTLKLLAISLAFGLLAALPLGLMRVS-KNPWVNLPAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +SF+ ++ ++N SAY +EII S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFDAVRESFLWPWLSSATFCACLAFSINTSAYTAEIIAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G+++ + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I + Y P Y YL LT Sbjct: 183 AARTINAQFYLPFEAYVTAGVFYLCLT 209 >gi|330901549|gb|EGH32968.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] Length = 219 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 113/208 (54%), Gaps = 6/208 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M L+ S PQL+ A TL I+ ++ V S + G V+R + + + Sbjct: 1 MASSGLELLWVSAPQLITGA-GRTLGISLLAIVFSSLGGLCYGVLR-SLGKRWLEVPLRI 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ +FR P+LV L++ F+GLP +G+ +F ++ L+L ++ + E++R + SIP+ Sbjct: 59 YLELFRAIPVLVWLYLFFFGLPIFLGLSIPAFWCAVLVLSLWGASEVGEVVRGGLRSIPR 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A AIGL Q ++LPQ + P+ + + ++K++S+A I + ++ + Q Sbjct: 119 GQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVVDVTKVGQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCY 207 +I+ TY+ ++IY F++L CY Sbjct: 179 QIIERTYESVLIY---GFLFLFFFIVCY 203 >gi|322386069|ref|ZP_08059708.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] gi|321269913|gb|EFX52834.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] Length = 231 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 105/194 (54%), Gaps = 1/194 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A +TL IA + + ++G +++IR + +++ + Y+ + R T Sbjct: 10 IVEQYLPLYQKAFFLTLHIAVWGILGAFLVGLLVSIIR-HYRIPVLAQLATAYIELSRNT 68 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IGIV S V + L +Y++E RS + ++ + Q + AI Sbjct: 69 PLLIQLFFLYFGLPRIGIVLSSEVCATLGLIFLGGSYMAESFRSGLEAVSQTQHEIGLAI 128 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q R+++LPQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 129 GLTPVQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 188 Query: 189 LIIYCELAFVYLIL 202 I L YLI+ Sbjct: 189 DIALAMLVVAYLIM 202 >gi|226951613|ref|ZP_03822077.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ [Acinetobacter sp. ATCC 27244] gi|294651270|ref|ZP_06728596.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Acinetobacter haemolyticus ATCC 19194] gi|226837643|gb|EEH70026.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ [Acinetobacter sp. ATCC 27244] gi|292822836|gb|EFF81713.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Acinetobacter haemolyticus ATCC 19194] Length = 247 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 100/179 (55%), Gaps = 14/179 (7%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH--- 83 IA +++ I++++G + ++R + T + I YV +FR PLL+QLF+ FY +P+ Sbjct: 35 IAVVAWTIAMLLGSILGIMRTLPNKTARA-IGTAYVTLFRNVPLLIQLFIWFYVVPNFLP 93 Query: 84 ----------IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 +G + ++ I L L +A + E +R+ I ++P+GQ +A YA+G + Sbjct: 94 APIKNWWMSDLGANTTALISASIGLGLFTAARVCEQVRTGIEALPQGQINAGYAMGFSTA 153 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 Q R++ILPQ+ T PLSSE + +K+TSVAS + + EI + I T + IY Sbjct: 154 QLYRYVILPQSFRTILPPLSSELTNCVKNTSVASLVGVAEIISQMKTISEYTQNTIEIY 212 >gi|301155864|emb|CBW15332.1| arginine transporter subunit [Haemophilus parainfluenzae T3T1] Length = 227 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 65/211 (30%), Positives = 120/211 (56%), Gaps = 13/211 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLF 75 A I +P + + V+SL I FF+A+ F + ++ ++ ++ +F GTPLLVQ F Sbjct: 7 AVIAQGIPTSLLLTVVSLFIAFFLALGLTFLLSIGNKLVKSAVNLFLVLFTGTPLLVQFF 66 Query: 76 VIFYG---------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 +I+ G P G+ +++ ++L LN +AY +++ ++ +I KGQW++ Sbjct: 67 LIYAGPGQFQWLVDSPLWGLFSNAWFCAALALALNSAAYSTQLFHGAVKAISKGQWESCA 126 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+GL+R QT++ I++P + + ++E I + K T++ASTITI +I A+++ T Y Sbjct: 127 ALGLSRLQTLK-ILIPYALKRALPSYTNEIILVFKGTALASTITIMDIMGYARQLYGTEY 185 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 L IY +YLI+T ++ ++E+ V Sbjct: 186 DALTIYGIAGGIYLIITGIATLLLRQLENKV 216 >gi|145627845|ref|ZP_01783646.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae 22.1-21] gi|145639302|ref|ZP_01794908.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae PittII] gi|144979620|gb|EDJ89279.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae 22.1-21] gi|145271605|gb|EDK11516.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae PittII] gi|309751178|gb|ADO81162.1| Arginine ABC transporter, permease protein ArtQ [Haemophilus influenzae R2866] Length = 221 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 119/218 (54%), Gaps = 10/218 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + F L++ A ++TL +A S ++ L + AV+ ++ + M +V + RG Sbjct: 1 MFSDFLSLMFTAALMTLGLAVCSLLLGLFLSLIFAVLE---ANRFVGKPMTVFVALLRGL 57 Query: 69 PLLVQLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 P ++ + ++++G L I F +F +++L+L F+AY S+ +R +I +IPKGQ Sbjct: 58 PEIIVVLLVYFGSTELVEMLTGEYIEFGAFGCGVLALSLIFAAYASQTLRGAIQAIPKGQ 117 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W++ A+GL++ T HI++PQ + LS++++ +LK T++ S I + ++ A I Sbjct: 118 WESGAALGLSKSYTFIHIVMPQVWRHALPGLSTQWLVLLKDTALVSLIGVDDLMHQADLI 177 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + T+QP Y A +YL +T + K+E T+ Sbjct: 178 NTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTR 215 >gi|295096442|emb|CBK85532.1| L-arginine ABC transporter membrane protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 222 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 121/218 (55%), Gaps = 14/218 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D P+L+ + +L + S +++LI+ ++ + ++ I+ Y+ +F GT Sbjct: 1 MLDYLPELM-KGLHTSLTLTVASIIVALILALIFTIV-LTLKTPVLVWIVRGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPSLQEYPVIWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW + A+G+++K T+ I+LP + S+E + + KSTS+A TIT+ E+ Sbjct: 119 EGQWQSCGALGMSKKDTL-AILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 Q + TY ++++ VYL++ ++ IE Sbjct: 178 QLLYGRTYD-VMVFGAAGLVYLVVNGLLTLMMRLIERK 214 >gi|291276580|ref|YP_003516352.1| amino acid ABC transporter integral membrane protein [Helicobacter mustelae 12198] gi|290963774|emb|CBG39609.1| amino-acid ABC transporter integral membrane protein [Helicobacter mustelae 12198] Length = 218 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 101/168 (60%), Gaps = 1/168 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+V+TL I+ + ++I+G ++ + +++ + I FY+ + R TPLL+ LF ++Y Sbjct: 18 ALVLTLKISFFGILGAVILGMLVSFL-LYYQVRFLKNIAKFYIELSRNTPLLIHLFFLYY 76 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GL +GI D++ +I + +Y++E R + S+ K Q +++ A+GL+ +Q + ++ Sbjct: 77 GLGQVGIKIDAYHCAVIGVIFLGGSYMAESFRMGLESVAKSQIESAKALGLSTRQILGYV 136 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 ILPQ++ + PL++ I +LK TSV S I + ++ + ++ T Y+ Sbjct: 137 ILPQSLIYALPPLAANVIFLLKETSVVSAIALVDVVFVTKDLIGTYYK 184 >gi|256828612|ref|YP_003157340.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] gi|256577788|gb|ACU88924.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] Length = 222 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 71/201 (35%), Positives = 113/201 (56%), Gaps = 3/201 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E +++D+ P +L A V + + F + L IG +AV +++ + +L YVW Sbjct: 3 ETVTVLLDAMPYVLQGATVTVIAVVGAMF-LGLFIGVPLAVGQVYGPWAVRTLC-GLYVW 60 Query: 64 IFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FRG P+LV LF+ ++GL + +G+ ++ A II L + AY S+I R SI+S+ KGQ Sbjct: 61 FFRGVPILVLLFLFYFGLFNLVGLNLNAVAAAIIVLGMTSGAYQSQIFRGSILSLSKGQL 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A+ A+G++ IR IILPQ + S S+E+ ILK +++A + EI + Sbjct: 121 KAARALGMSDGLAIRSIILPQALRLSIPGWSNEYSIILKDSALAFVLGASEIMARTHFVA 180 Query: 183 STTYQPLIIYCELAFVYLILT 203 S TYQ L +Y A +Y +LT Sbjct: 181 SRTYQHLPMYVSAAVLYFLLT 201 >gi|228476994|ref|ZP_04061632.1| ABC-type amino acid transport system, permease component [Streptococcus salivarius SK126] gi|228251013|gb|EEK10184.1| ABC-type amino acid transport system, permease component [Streptococcus salivarius SK126] Length = 226 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 102/183 (55%), Gaps = 1/183 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A +TL IA + + S ++G ++VIR + I+S + Y+ + R TPLL+QLF +++ Sbjct: 16 AFFLTLHIAVLGILGSFLLGLVVSVIR-HYRVPILSQLSTAYIELSRNTPLLIQLFFLYF 74 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP IG+V S ++ L +Y++E RS + ++ + Q + +IGLT Q R++ Sbjct: 75 GLPRIGLVLSSEACAVVGLIFLGGSYMAESFRSGLEAVSQTQHEVGLSIGLTPFQVFRYV 134 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + + S+ I ++K TSV S + + ++ A+ ++ Y+ + L Y Sbjct: 135 VLPQAVAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYETDVALGMLVVAY 194 Query: 200 LIL 202 L++ Sbjct: 195 LLM 197 >gi|28868348|ref|NP_790967.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28851585|gb|AAO54662.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 243 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/179 (35%), Positives = 107/179 (59%), Gaps = 1/179 (0%) Query: 37 IIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIII 96 ++GF A+ R+ S + I FY FRGTPLL+Q+ +I+ GLP +GIV + A +I Sbjct: 56 LLGFVTALARLS-SSAVAFGIASFYASFFRGTPLLIQILLIYLGLPQLGIVPGAIAAGVI 114 Query: 97 SLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF 156 +L+LN+ AY+SEI R+ II + GQ +A+ A+ L Q + LPQ + T P +++F Sbjct: 115 ALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPTQIFWRVTLPQAMRTIIPPTTNQF 174 Query: 157 ISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 IS+LK +S+ S + + E+ AQ ++Y+ + + A +Y I++ ++Q ++E Sbjct: 175 ISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLEK 233 >gi|330982420|gb|EGH80523.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 219 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 113/208 (54%), Gaps = 6/208 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M L+ S PQL+ A TL I+ ++ V S + G V+R + + + Sbjct: 1 MASSGLELLWVSAPQLITGA-GRTLGISLLAIVFSSLGGLCYGVLR-SLGKRWLEVPLQI 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ +FR P+LV L++ F+GLP +G+ +F ++ L+L ++ + E++R + SIP+ Sbjct: 59 YLELFRAIPVLVWLYLFFFGLPIFLGLSIPAFWCAVLVLSLWGASEVGEVVRGGLRSIPR 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A AIGL Q ++LPQ + P+ + + ++K++S+A I + ++ + Q Sbjct: 119 GQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVVDVTKVGQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCY 207 +I+ TY+ ++IY F++L CY Sbjct: 179 QIIERTYESVLIY---GFLFLFFFIVCY 203 >gi|307704543|ref|ZP_07641450.1| amino acid ABC transporter, permease protein [Streptococcus mitis SK597] gi|307621908|gb|EFO00938.1| amino acid ABC transporter, permease protein [Streptococcus mitis SK597] Length = 226 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 105/194 (54%), Gaps = 1/194 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A +TL IA + S ++G +++IR + +++ + Y+ + R T Sbjct: 5 IVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIR-HYRIPVLAQVATAYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IGIV S V + L +Y++E RS + ++ + Q + AI Sbjct: 64 PLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAVSQTQQEIGLAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q R+++LPQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183 Query: 189 LIIYCELAFVYLIL 202 I L YL++ Sbjct: 184 DIALTMLVVAYLMM 197 >gi|15888723|ref|NP_354404.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15156465|gb|AAK87189.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 217 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 101/173 (58%), Gaps = 1/173 (0%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 + I+F I + G F A++R+ ++ + + Y+ + + P+L+ LF+ +YGL G Sbjct: 22 LTAIAFSIGSLTGGFFAIMRLSQYGSVRN-VAAGYITVIQSIPVLMILFMSYYGLTLFGF 80 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 +A +SL++ SAY++EI R SI ++PK QW+AS ++ LTR Q R++ILPQ + Sbjct: 81 EIPPLLAASVSLSVYVSAYLAEIWRGSIQAVPKPQWEASASLALTRFQQYRYVILPQALR 140 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 S P + ++K+TS+ S + E+ + Q + + T++P ++ +A +Y Sbjct: 141 LSLPPTVGFLVQLVKNTSIVSVVGFVELSRAGQLVNNATFRPFQVFFVVALLY 193 >gi|23098013|ref|NP_691479.1| amino acid ABC transporter permease [Oceanobacillus iheyensis HTE831] gi|22776237|dbj|BAC12514.1| amino acid ABC transporter permease [Oceanobacillus iheyensis HTE831] Length = 234 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 73/233 (31%), Positives = 117/233 (50%), Gaps = 16/233 (6%) Query: 1 MKYEWFNLIIDSFPQLLYA-AIVVTLPIACISFVISLIIGFFIAVIRIFFS---DTIISL 56 M Y + +D+ P +L I V L I+C F+ ++I GFF R + + I++ Sbjct: 1 MNYWSWETFMDALPFVLQGLGITVGLTISC--FLFAMIFGFFWTFARRVKNRPFNFIVTW 58 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPH---IGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 M F R TP LVQLF I++ P IG+ FV ++ L ++FS YI EI RS Sbjct: 59 TMEF----IRSTPPLVQLFFIYFAFPSVPVIGMTLHPFVCAVLGLGIHFSTYIGEIYRSG 114 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I S+ KGQW+AS ++ + R IILPQ I + L + FI + K + STI++ Sbjct: 115 IESVEKGQWEASTSLNFSTLDKWRKIILPQAIPPTIPMLGNYFIIMFKEVPITSTISVGG 174 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 I A+ + + L + ++L+L+ ++ K+E ++ + DK Sbjct: 175 IMLMARTYGAQNWSYLEPITIVGIIFLLLSYPSAVLIKKLE---LKYNRNFDK 224 >gi|26991170|ref|NP_746595.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida KT2440] gi|148546671|ref|YP_001266773.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida F1] gi|24986215|gb|AAN70059.1|AE016645_5 basic amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] gi|148510729|gb|ABQ77589.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida F1] Length = 232 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 115/207 (55%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N++ ++ P + + ++ TL + IS L+ + ++R+ +++L Y ++ Sbjct: 5 YNVVWEALP-MYFGGLLTTLKLLAISLFFGLLAAIPLGLMRVS-RQPVVNLAAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDS-FVAIIISLT--------LNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +S F ++ S T +N SAY +EII S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFEAVRESIFWPLLSSATFCACLAFGINTSAYTAEIIAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G++R + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + Y P Y YL LT Sbjct: 183 AARTVNAQYYLPFEAYITAGVFYLCLT 209 >gi|291619610|ref|YP_003522352.1| YckA [Pantoea ananatis LMG 20103] gi|291154640|gb|ADD79224.1| YckA [Pantoea ananatis LMG 20103] Length = 216 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 108/189 (57%), Gaps = 2/189 (1%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P LL A +T+ I +S +IS +G A ++ IIS + + I R P++V Sbjct: 11 PFLLQGA-EMTIYITILSLLISTPLGLVFAAAKMC-PFKIISWPVSVIINITRALPMIVV 68 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LF I++ P IGI SF A ++ + FS +++EI RS I S+ +GQ +A+ ++G++ Sbjct: 69 LFYIYFVFPDIGITLTSFQASVVGIAFCFSTFLAEIFRSGIESVDRGQLEAARSMGMSFF 128 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + +R +ILPQ + P S+ + +LK +++ASTI + E+ + Q + ++T+ +Y Sbjct: 129 KAMRRVILPQAFHVALPPYSNTLVMMLKDSALASTIAVTEMTRQGQLLAASTFDNTTVYT 188 Query: 194 ELAFVYLIL 202 +A +YL L Sbjct: 189 LVALLYLTL 197 >gi|213967200|ref|ZP_03395349.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301381064|ref|ZP_07229482.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302061561|ref|ZP_07253102.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|213928042|gb|EEB61588.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|331018098|gb|EGH98154.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 277 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/179 (35%), Positives = 107/179 (59%), Gaps = 1/179 (0%) Query: 37 IIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIII 96 ++GF A+ R+ S + I FY FRGTPLL+Q+ +I+ GLP +GIV + A +I Sbjct: 90 LLGFVTALARLS-SSAVAFGIASFYASFFRGTPLLIQILLIYLGLPQLGIVPGAIAAGVI 148 Query: 97 SLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF 156 +L+LN+ AY+SEI R+ II + GQ +A+ A+ L Q + LPQ + T P +++F Sbjct: 149 ALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPTQIFWRVTLPQAMRTIIPPTTNQF 208 Query: 157 ISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 IS+LK +S+ S + + E+ AQ ++Y+ + + A +Y I++ ++Q ++E Sbjct: 209 ISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLEK 267 >gi|254393590|ref|ZP_05008722.1| amino acid ABC transporter integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|294812811|ref|ZP_06771454.1| Putative polar amino acid ABC transporter permease protein [Streptomyces clavuligerus ATCC 27064] gi|326441239|ref|ZP_08215973.1| amino acid ABC transporter integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|197707209|gb|EDY53021.1| amino acid ABC transporter integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|294325410|gb|EFG07053.1| Putative polar amino acid ABC transporter permease protein [Streptomyces clavuligerus ATCC 27064] Length = 216 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 48/138 (34%), Positives = 82/138 (59%) Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLLVQLF ++Y LP GI + I+ L L++S Y +E+ R+ I +P+GQW+A+ Sbjct: 63 RNTPLLVQLFFLYYVLPEWGITLSATATGILGLGLHYSTYTAEVYRAGIDGVPEGQWEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+ L+R++T +ILPQ + A L + I++LK T + I + E+ A++ S T Sbjct: 123 TALNLSRRRTWSGVILPQALRRVAPALGNYVIAMLKDTPMLFVIGVMEMLGAARQFSSET 182 Query: 186 YQPLIIYCELAFVYLILT 203 + + + + +L+L+ Sbjct: 183 FLTVEAFTVVGVAFLVLS 200 >gi|55821172|ref|YP_139614.1| polar amino acid ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55823085|ref|YP_141526.1| amino acid (glutamine) ABC transporter permease [Streptococcus thermophilus CNRZ1066] gi|55737157|gb|AAV60799.1| polar amino acid ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55739070|gb|AAV62711.1| amino acid (glutamine) ABC transporter permease protein [Streptococcus thermophilus CNRZ1066] Length = 232 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 105/185 (56%), Gaps = 10/185 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ + +++L++G + + ++ I YV IF+ TPLLVQ V+FYG Sbjct: 33 TLGISIGALIVALLLGLIFGAMSST-HNKVLRGISRVYVEIFQNTPLLVQFVVVFYG--- 88 Query: 84 IGIVFDSFVAIIISLT------LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 I I+ D V I SLT + AYISEIIR+ I ++PKGQ +A+ + G T T+R Sbjct: 89 ISILTDGNVMIPTSLTAILCVGVYTGAYISEIIRTGIEAVPKGQTEAALSQGFTYADTMR 148 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 IILPQ + T PL+++ ++++K+TS + I+ +I TA+ T + + AF Sbjct: 149 IIILPQAVHTILPPLTNQVVNLIKNTSTVAIISGADIMFTAKAWAYDTTNYVPAFAGAAF 208 Query: 198 VYLIL 202 +Y I+ Sbjct: 209 LYFIM 213 >gi|317407718|gb|EFV87648.1| hypothetical protein HMPREF0005_03583 [Achromobacter xylosoxidans C54] Length = 217 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/193 (32%), Positives = 104/193 (53%), Gaps = 6/193 (3%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFYVWIFR 66 I + P LL + VTL I + V+++ + V R+ T+ + + YV +FR Sbjct: 8 IAELVPPLLEG-LAVTLEIMAGAVVLAVPLALVAGVGRL---STVRPVRWLASIYVEVFR 63 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GT LVQLF ++ LP G+ + + I+ L LN AY +E++R +I ++P GQ +A Sbjct: 64 GTSALVQLFWFYFVLPLFGVQLPAMLVGIVVLALNAGAYGAEVVRGAIRAVPPGQREAGV 123 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+ LTR Q +R I++PQ I P + I +LK+T++ S ITI ++ Q + S T Sbjct: 124 ALNLTRGQIMRRIVVPQAIPAMLPPAGNLLIELLKNTALVSLITITDLTFRGQLLRSETL 183 Query: 187 QPLIIYCELAFVY 199 + I+ + +Y Sbjct: 184 RTTEIFTLMLLLY 196 >gi|13488462|ref|NP_109469.1| ABC transporter [Mesorhizobium loti MAFF303099] gi|14028216|dbj|BAB54808.1| ABC transporter [Mesorhizobium loti MAFF303099] Length = 219 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 94/169 (55%), Gaps = 2/169 (1%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 AI TL +S + + +GF + +IR L + F + R TP+L L+ ++ Sbjct: 17 GAIGATLLATVLSCLGASALGFSLEMIR--RGGGAPGLAVRFLIDFIRSTPVLAWLYFLY 74 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 + +P GI + ++ L+L +S Y++E+ ++ I +IPKGQ +A+ A+ L+R+ T+ Sbjct: 75 FVMPFYGIRLGAMTVGVMGLSLYYSGYLAEVFKAGIDAIPKGQQEAARALSLSRRDTVVF 134 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +I PQ + A PL + +SILK+T + + +PE+ A I S TY+ Sbjct: 135 VIAPQMLRNVAAPLGNYVVSILKATPYLAILAVPEMLGRAFDIASETYR 183 >gi|325267568|ref|ZP_08134220.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Kingella denitrificans ATCC 33394] gi|324980918|gb|EGC16578.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Kingella denitrificans ATCC 33394] Length = 245 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 72/240 (30%), Positives = 120/240 (50%), Gaps = 36/240 (15%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF-------FSDTIISLIMHF- 60 II + Q+ ++TL + ++ + ++G F A+ RI F I L+ Sbjct: 3 IIWEYRQMFLTGALMTLKLTTVAVLGGSVLGLFGALARIIRFEKGGVFLRGIAWLLRTLS 62 Query: 61 --YVWIFRGTPLLVQLFVIFY------------------GLPHIGIVFDSFVAIIISLTL 100 YV +FRGTPL VQ+F+ + + + VA +++LT+ Sbjct: 63 LIYVTLFRGTPLFVQIFIWHFVWSVALVNPADGWILSGDAAAEVRRNYGPLVAGVLALTV 122 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N AYI+EI R+ I SI +GQ +A+ ++GLT Q +R++ILPQ + PL++EFI+++ Sbjct: 123 NAGAYITEIFRAGIQSIDRGQMEAARSLGLTYAQAMRYVILPQALRRMLPPLANEFITLM 182 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQ----PLIIYCELAFVYLILTSFCYIIQIKIESS 216 K +S+ S I + E+ Q +S Y PL +A +YLIL+ I ++E Sbjct: 183 KDSSLLSAIAVAEL-AYVQSTISGRYSIYEAPL---YTVALIYLILSMGLSWIFARLEKK 238 >gi|237799755|ref|ZP_04588216.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022610|gb|EGI02667.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 277 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 126/217 (58%), Gaps = 10/217 (4%) Query: 7 NLIIDSFPQLL---------YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI 57 ++I+D P L+ +TL ++ S ++S+++GF A+ R+ S + I Sbjct: 51 SIILDKLPNLIGLHLAPNGFLQGAALTLFVSLCSIIVSVVLGFVTALARLS-SSAVAFGI 109 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 FY FRGTPLL+Q+ +I+ GLP +GIV + +A +I+L+LN+ AY+SEI R+ II + Sbjct: 110 ASFYASFFRGTPLLIQILLIYLGLPQVGIVPGAIMAGVIALSLNYGAYLSEIFRAGIIGV 169 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQ +A+ A+ L Q + LPQ + T P +++FIS+LK +S+ S + + E+ Sbjct: 170 AAGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFL 229 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 AQ ++Y+ + + A +Y I++ ++Q ++E Sbjct: 230 AQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266 >gi|154246381|ref|YP_001417339.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] gi|154160466|gb|ABS67682.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] Length = 219 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 102/184 (55%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + ++ V I GF +A++R + + + Y+ + +G P+L+ LF+ +YGL Sbjct: 21 TLALTGLAMVGGGIAGFLVALMRTA-RTSALRIAAGVYIQVVQGIPVLMILFLSYYGLSL 79 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 G + VA +S+++ S Y+ EI R I ++PK QW++ ++ LT Q +IILPQ Sbjct: 80 AGYQLPAIVAAGLSMSIYASGYLGEIWRGCIQAVPKPQWESGESLALTIPQQYLYIILPQ 139 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I S P + ++K+TS+A+ I E+ + Q I + T+QP ++ +A +Y ++ Sbjct: 140 AIRISLPPTVGFLVQLVKNTSIAALIGFVELTRAGQLINNATFQPFRVFLTVAALYFVI- 198 Query: 204 SFCY 207 CY Sbjct: 199 --CY 200 >gi|116628271|ref|YP_820890.1| ABC-type amino acid transport system, permease component [Streptococcus thermophilus LMD-9] gi|116101548|gb|ABJ66694.1| ABC-type amino acid transport system, permease component [Streptococcus thermophilus LMD-9] Length = 226 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 102/183 (55%), Gaps = 1/183 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A +TL IA + + S ++G ++VIR + I+S + Y+ + R TPLL+QLF +++ Sbjct: 16 AFFLTLHIAVMGIIGSFLLGLVVSVIR-HYRVPILSQLSTAYIELSRNTPLLIQLFFLYF 74 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP IG+V S ++ L +Y++E RS + ++ + Q + +IGLT Q R++ Sbjct: 75 GLPRIGLVLSSETCAVVGLIFLGGSYMAESFRSGLEAVSQTQHEVGLSIGLTPFQVFRYV 134 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + + S+ I ++K TSV S + + ++ A+ ++ Y+ + L Y Sbjct: 135 VLPQAVAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLMGLYYETDVALGMLVVAY 194 Query: 200 LIL 202 L++ Sbjct: 195 LLM 197 >gi|219670587|ref|YP_002461022.1| polar amino acid ABC transporter inner membrane subunit [Desulfitobacterium hafniense DCB-2] gi|219540847|gb|ACL22586.1| polar amino acid ABC transporter, inner membrane subunit [Desulfitobacterium hafniense DCB-2] Length = 221 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 102/187 (54%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M W I+ + P L A +TL +A + SL++G +VI +++ ++ IM Sbjct: 1 MNLNW-EFILQNIP-LYEKAAWLTLKLAFWGTLFSLLLGLICSVI-MYYRIPLLKTIMGG 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLL+Q++ +++GLP +G+ I+ L+ +Y++E +R + ++ K Sbjct: 58 YIELSRNTPLLIQVYFLYFGLPKLGVTLSETACAILGLSFLGGSYMAEALRGGMEAVSKS 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q ++ ++GL+R Q IR+++ PQ + S L + I +LK TSV I I ++ + Sbjct: 118 QIESGLSLGLSRWQLIRYVVFPQAFSFSIPALGANCIFLLKETSVLGAIAILDLMNVTKD 177 Query: 181 IVSTTYQ 187 ++ YQ Sbjct: 178 LIGMYYQ 184 >gi|289672926|ref|ZP_06493816.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. syringae FF5] Length = 226 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 113/208 (54%), Gaps = 6/208 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M L+ S PQL+ A TL I+ ++ V S + G V+R + + + Sbjct: 8 MASSGLELLWVSAPQLITGA-GRTLGISLLAIVFSSLGGLCYGVLRSL-GKRWLEVPLRI 65 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ +FR P+LV L++ F+GLP +G+ +F ++ L+L ++ + E++R + SIP+ Sbjct: 66 YLELFRAIPVLVWLYLFFFGLPIFLGLSIPAFWCAVLVLSLWGASEVGEVVRGGLRSIPR 125 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A AIGL Q ++LPQ + P+ + + ++K++S+A I + ++ + Q Sbjct: 126 GQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVVDVTKVGQ 185 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCY 207 +I+ TY+ ++IY F++L CY Sbjct: 186 QIIERTYESVLIY---GFLFLFFFIVCY 210 >gi|238765044|ref|ZP_04625980.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638] gi|238696730|gb|EEP89511.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638] Length = 227 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 100/178 (56%), Gaps = 5/178 (2%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH----FYVWIFRGT 68 P+LL + ++VT+ + ++ + + +G A IR + + +I+ YV I R T Sbjct: 14 LPELL-SGLLVTIELTAMATIGGIALGVVGAAIRCSHNPRLDKVILRRVWGGYVEIVRNT 72 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P +VQLF I +GLP +G+ + A ++++T+N AY +EIIR+ I + KGQW+A + Sbjct: 73 PFVVQLFFIVFGLPALGLKLSAGQAAVLAMTINLGAYSTEIIRAGIQASAKGQWEAGRVL 132 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 GL+R Q +ILP ++ L S+ I ++ ++V S ++ E+ A I S T+ Sbjct: 133 GLSRSQVFFRVILPPSLQRIYPALVSQCIIVMLGSAVVSQVSFEELTFAANLIQSRTF 190 >gi|213968636|ref|ZP_03396778.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|302059835|ref|ZP_07251376.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302132496|ref|ZP_07258486.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926569|gb|EEB60122.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 232 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 114/207 (55%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N+I DS P L + ++ TL + IS L+ + ++R+ + +++ Y ++ Sbjct: 5 YNVIWDSLP-LYFGGLLTTLKLLAISLAFGLLAALPLGLMRVS-KNPWVNMPAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +SF+ ++ +N SAY +EII S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFAAVRESFLWPWLSSATFCACLAFAINTSAYTAEIIAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G+++ + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPAGEIEAARAMGMSKVKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + Y P Y YL LT Sbjct: 183 AARTVNAQFYLPFEAYVTAGVFYLCLT 209 >gi|171316137|ref|ZP_02905362.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171098741|gb|EDT43535.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 228 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 102/194 (52%), Gaps = 2/194 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IM 58 M Y+ + + + + T + ++ V+ + IG A + + L ++ Sbjct: 1 MSYQLRFGELAEYAGMFASGAATTFALTAVATVLGVSIGVLGAASYSADARAAVRLRPLV 60 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV R TP +VQLF IF+GLP +G+ D + A +++TLN AY EI+R+ + ++P Sbjct: 61 GAYVEAIRNTPFVVQLFFIFFGLPALGVHIDEYTAATLAMTLNLGAYSVEIVRAGVAAVP 120 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A+ A+ ++R Q +RH++LPQ + L+S+ + + ++V S I++ ++ A Sbjct: 121 KGHLEAAAALAMSRAQMLRHVVLPQALAKVFPALASQIVITMLGSAVVSQISVADLTYAA 180 Query: 179 QRIVSTTYQPLIIY 192 I S ++ Y Sbjct: 181 SYIQSRNFRSFETY 194 >gi|204929308|ref|ZP_03220451.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321852|gb|EDZ07051.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|322617097|gb|EFY14003.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617597|gb|EFY14496.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624773|gb|EFY21602.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630323|gb|EFY27093.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634503|gb|EFY31236.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639214|gb|EFY35906.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640077|gb|EFY36744.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645703|gb|EFY42227.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652067|gb|EFY48430.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656239|gb|EFY52536.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659391|gb|EFY55638.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665851|gb|EFY62034.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669910|gb|EFY66051.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322678654|gb|EFY74710.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683551|gb|EFY79565.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687626|gb|EFY83596.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323193539|gb|EFZ78744.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198446|gb|EFZ83548.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204558|gb|EFZ89561.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208504|gb|EFZ93443.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213642|gb|EFZ98431.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218323|gb|EGA03033.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222922|gb|EGA07271.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224503|gb|EGA08785.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232318|gb|EGA16421.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235648|gb|EGA19732.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323241192|gb|EGA25228.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244934|gb|EGA28936.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250053|gb|EGA33947.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253837|gb|EGA37662.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323254974|gb|EGA38765.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259839|gb|EGA43471.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264140|gb|EGA47647.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270838|gb|EGA54276.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 235 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 115/216 (53%), Gaps = 11/216 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S V+ ++ +AV R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLISSVVMGGLLAVILAVGRVS-SNKFIRFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTDLLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 P + A +YL+++ + + E QH S Sbjct: 199 PFTAFGIAAVLYLLISYVLISLFRRAERRWLQHVSS 234 >gi|238785181|ref|ZP_04629174.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia bercovieri ATCC 43970] gi|238713929|gb|EEQ05948.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia bercovieri ATCC 43970] Length = 240 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 116/214 (54%), Gaps = 19/214 (8%) Query: 9 IIDSFPQLLYAAIVVTLPIACIS--FVISLIIGFFIAVIRIF---FSDTIISLIMHFYVW 63 ++++ P L++ T +A + F++S++ G +A++ F +S ++ + Sbjct: 6 MLEAAPTFLFSDGSDTTGLAMTAKLFLLSVLPGMLLALLMAVGQAFGPRPLSWLIRSISY 65 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIV--------------FDSFVAIIISLTLNFSAYISEI 109 FR TPL +QL +I+YGL IV D+ ++L LN SAY++E+ Sbjct: 66 FFRSTPLYLQLMLIYYGLSQFDIVQLGWQEDQPFWLLFRDATFCATLALVLNTSAYVAEL 125 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 + +++ P+ +W A A G+++ Q IR ++LP T+ L++E + +L +TS+AST+ Sbjct: 126 LAGMMVTFPRQEWVAGEAFGMSQWQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTV 185 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 T+ +I A+ ++TY P I + A +YL+ T Sbjct: 186 TLLDITGVARSFYASTYSPFIPFLMAAALYLLCT 219 >gi|268589605|ref|ZP_06123826.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Providencia rettgeri DSM 1131] gi|291315079|gb|EFE55532.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Providencia rettgeri DSM 1131] Length = 254 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 40/231 (17%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMH-------- 59 II+ + L ++T+ I ++ + G + + R ++ I I+H Sbjct: 8 IIEEYAPLFAEGAMMTIKATIICVILGSLWGLTLGLGRTAKAEQGIWKPILHYFVQWPVR 67 Query: 60 FYVWIFRGTPLLVQLFVIFYGL------PHIGIV-----------------FDSFVAIII 96 FYV FRGTPL VQ+ V+ + L P G+ + +F++ +I Sbjct: 68 FYVSAFRGTPLFVQIMVVHFALVPLFINPRDGLFVTSGLMSVDTAKMLRSDYGAFLSCVI 127 Query: 97 SLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF 156 ++TLN AY+SEI R+ I SI KGQ +AS A+G++ +T+R +ILPQ PL + Sbjct: 128 AITLNSGAYVSEIFRAGIQSIDKGQMEASRALGMSWAKTMRKVILPQAFRRILPPLGNNA 187 Query: 157 ISILKSTSVASTITIPEIFQTAQRIVSTTY----QPLIIYCELAFVYLILT 203 I+I+K +S+AS I + ++ A R VS Y +P Y ++ +Y +LT Sbjct: 188 IAIVKDSSLASAIGLADL-AYAARTVSGAYATYWEP---YLTISVIYWMLT 234 >gi|322805718|emb|CBZ03283.1| amino acid ABC transporter, permease protein [Clostridium botulinum H04402 065] Length = 221 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 84/132 (63%), Gaps = 7/132 (5%) Query: 62 VWI--FRGTPLLVQLFVIFYGL----PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 +W+ FRGTPL+ QLF +++G+ P + + D+ A II L N SAY+SE +R +I Sbjct: 57 IWVSFFRGTPLIAQLFFLYFGIVQLIPSLKNM-DAMTAAIIGLGFNASAYMSETLRGAIS 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ KGQ +AS +IG+T Q+++ I+ PQ + LS+ F+ I+K +++A T+ + EI Sbjct: 116 SVDKGQIEASLSIGMTPIQSMKRIVFPQAARVALPALSNSFVDIIKGSALAFTLGVVEIM 175 Query: 176 QTAQRIVSTTYQ 187 AQ +++Y+ Sbjct: 176 AVAQSEGASSYR 187 >gi|298290886|ref|YP_003692825.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296927397|gb|ADH88206.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 240 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 13/213 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++T+ +A + + + IG IA+ + S I+ + Y IFRG P L+ LF+++Y Sbjct: 22 GALLTIELALATLPVGIAIGLMIALAKDS-SSAILRGFGNLYTTIFRGLPELLTLFIVYY 80 Query: 80 G------------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 G + I + FVA +++L L A+ SE++ ++I ++PKGQ +A+ A Sbjct: 81 GGQMLLTRIAGYLVDGANIEVNQFVAGVVALGLVLGAFSSEVLLAAIRAVPKGQKEAAAA 140 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL+ +T R + PQ + LS+ ++ +LK TS+ S I I ++ + V T Q Sbjct: 141 LGLSGWRTFRLVTFPQLWRVALPGLSNNWMVLLKDTSLVSVIAISDLMRQTAIAVGVTKQ 200 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P Y +YL+ + ++ K+E + Sbjct: 201 PFFFYLVACLIYLVFSGASSVVFGKLEDRAARG 233 >gi|16761277|ref|NP_456894.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765679|ref|NP_461294.1| histidine/lysine/arginine/ornithine transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141027|ref|NP_804369.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56412751|ref|YP_149826.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62180923|ref|YP_217340.1| histidine and lysine/arginine/ornithine ABC transporter [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161612915|ref|YP_001586880.1| hypothetical protein SPAB_00621 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167549643|ref|ZP_02343402.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167993039|ref|ZP_02574134.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168229727|ref|ZP_02654785.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237376|ref|ZP_02662434.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168242476|ref|ZP_02667408.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261626|ref|ZP_02683599.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465939|ref|ZP_02699809.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168817912|ref|ZP_02829912.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444404|ref|YP_002041615.1| histidine ABC transporter permease protein HisM [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194447914|ref|YP_002046407.1| histidine ABC transporter permease HisM [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470447|ref|ZP_03076431.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735740|ref|YP_002115422.1| histidine ABC transporter permease HisM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251061|ref|YP_002147312.1| histidine ABC transporter permease HisM [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197361685|ref|YP_002141321.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|200389110|ref|ZP_03215722.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|207857770|ref|YP_002244421.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213023864|ref|ZP_03338311.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213417109|ref|ZP_03350253.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213426992|ref|ZP_03359742.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581829|ref|ZP_03363655.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213612824|ref|ZP_03370650.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213649620|ref|ZP_03379673.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|224583160|ref|YP_002636958.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238912368|ref|ZP_04656205.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289827473|ref|ZP_06546085.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|61225731|sp|P0A2I7|HISM_SALTY RecName: Full=Histidine transport system permease protein hisM gi|61225732|sp|P0A2I8|HISM_SALTI RecName: Full=Histidine transport system permease protein hisM gi|25296628|pir||AF0800 histidine transport system permease STY2582 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|154127|gb|AAA75580.1| M protein [Salmonella enterica subsp. enterica serovar Typhimurium] gi|1000516|emb|CAA24661.1| unnamed protein product [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16420894|gb|AAL21253.1| histidine and lysine/arginine/ornithine transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503576|emb|CAD07584.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Typhi] gi|29136652|gb|AAO68218.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127008|gb|AAV76514.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62128556|gb|AAX66259.1| ABC superfamily (membrane),histidine and lysine/arginine/ornithine transport protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161362279|gb|ABX66047.1| hypothetical protein SPAB_00621 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194403067|gb|ACF63289.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406218|gb|ACF66437.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456811|gb|EDX45650.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711242|gb|ACF90463.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631500|gb|EDX50060.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197093161|emb|CAR58605.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197214764|gb|ACH52161.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197289695|gb|EDY29058.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199606208|gb|EDZ04753.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205325332|gb|EDZ13171.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205328839|gb|EDZ15603.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205335889|gb|EDZ22653.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205338649|gb|EDZ25413.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205344787|gb|EDZ31551.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349394|gb|EDZ36025.1| histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709573|emb|CAR33918.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467687|gb|ACN45517.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|267994452|gb|ACY89337.1| histidine/lysine/arginine/ornithine transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158910|emb|CBW18423.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913343|dbj|BAJ37317.1| histidine ABC transporter permease protein HisM [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320086787|emb|CBY96559.1| Octopine transport system permease protein occM [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321222947|gb|EFX48018.1| Histidine ABC transporter, permease protein HisM [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322715401|gb|EFZ06972.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130683|gb|ADX18113.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989285|gb|AEF08268.1| histidine/lysine/arginine/ornithine transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] gi|223499|prf||0809313A protein M Length = 235 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 115/216 (53%), Gaps = 11/216 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S V+ ++ +AV R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLISSVVMGGLLAVILAVGRVS-SNKFIRFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTDLLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 P + A +YL+++ + + E QH S Sbjct: 199 PFTAFGIAAVLYLLISYVLISLFRRAERRWLQHVSS 234 >gi|257866172|ref|ZP_05645825.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257872503|ref|ZP_05652156.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257875807|ref|ZP_05655460.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|257800106|gb|EEV29158.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257806667|gb|EEV35489.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257809973|gb|EEV38793.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] Length = 218 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 99/165 (60%), Gaps = 1/165 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L + VT+ ++ +S + S IIG ++R F S + S ++ + + R PLL+ + Sbjct: 13 RFLIDGLRVTVEVSILSILFSFIIGGIAGILR-FSSIPVFSKVLGVVIDVIRNLPLLLII 71 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F ++ LP IGI F+ F + +++LT+ SA +SEI R+ + S+PKGQ +A + GL+ + Sbjct: 72 FFTYFALPQIGIRFNIFWSAVVALTIFESAMLSEIFRAGLNSVPKGQMEAGLSTGLSYVE 131 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +R I++PQ + S+ IS++K TS+A I++PE+ A+ Sbjct: 132 VLRSIVVPQAFKAMLPAIVSQLISLIKDTSLAVIISLPELTHHAR 176 >gi|313622667|gb|EFR93034.1| L-cystine transport system permease protein TcyM [Listeria innocua FSL J1-023] Length = 236 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 114/218 (52%), Gaps = 18/218 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 A++ T+P+ + ++ GF IA+ IR++ + I FYV FR TP ++ + Sbjct: 15 AMLKTIPLTLVMTFFPILFGFIIAILLTLIRMYHVR-FLEPIAKFYVSFFRSTPAILHIM 73 Query: 76 VIFYGLP----------HIGIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +I+ G+P +GI + V +II+L+ AY++EI+RS II++ GQ Sbjct: 74 LIYLGIPLIVDFLSKSFDLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQM 133 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+Y++G T Q IR ++LPQ TS ++ I L +TS+A+ + +PEI A + Sbjct: 134 EAAYSMGYTHGQAIRKVLLPQAFMTSLPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVA 193 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S Y L + A +Y LT I +E ++ ++ Sbjct: 194 SDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKY 231 >gi|161502503|ref|YP_001569615.1| hypothetical protein SARI_00547 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863850|gb|ABX20473.1| hypothetical protein SARI_00547 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 235 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 115/216 (53%), Gaps = 11/216 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S V+ ++ +AV R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLISSVVMGGLLAVILAVGRVS-SNKFIRFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTDFLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 P + A +YL+++ + + E QH S Sbjct: 199 PFTAFGIAAVLYLLISYVLISLFRRAERRWLQHVSS 234 >gi|146305346|ref|YP_001185811.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina ymp] gi|145573547|gb|ABP83079.1| amino acid ABC transporter membrane protein 1, PAAT family [Pseudomonas mendocina ymp] Length = 221 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/187 (30%), Positives = 101/187 (54%), Gaps = 1/187 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y++ + + LL TL + I ++ + +G A++R + I Sbjct: 1 MAYQFDFVAVLQHSDLLLQGAAFTLGLTAIGTLLGVALGIVGAILRAW-RIRPFDRIFGV 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TP +VQLF IF+GLP +G+ + A ++++ +N AY +EIIR+ I +IP G Sbjct: 60 YVELIRNTPFIVQLFFIFFGLPSLGVRLSEWEAAVLAMVINLGAYSTEIIRAGIQAIPHG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+ ++R +T RH++L + LSS+ I ++ ++V S I+ E+ A Sbjct: 120 QLEAAAALAMSRFETFRHVVLRPALGKVWPALSSQIIIVMLGSAVCSQISTEELSFAANF 179 Query: 181 IVSTTYQ 187 I S ++ Sbjct: 180 IQSRNFR 186 >gi|302388440|ref|YP_003824262.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium saccharolyticum WM1] gi|302199068|gb|ADL06639.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium saccharolyticum WM1] Length = 216 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 104/174 (59%), Gaps = 9/174 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + V++ I ++ V SL +G ++ R+ + ++ I+ FY+ + RGTPL++QL V Sbjct: 10 LAGGMWVSIQIFVVTLVFSLPLGLLVSFGRMS-KNPVVQAIVKFYISVMRGTPLMLQLMV 68 Query: 77 IFYGLPH------IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 +++G P+ +G + + A I N++AY +EI RS I S+P GQ++A+ +G Sbjct: 69 VYFG-PYNLFGMKVGNGYRLWAAFI-GFVFNYAAYFAEIYRSGIQSMPVGQYEAAKLLGY 126 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++ QT II PQ + +++E I+++K TS+A TI++ E+F A+ + S+ Sbjct: 127 SKTQTFFRIIFPQVVKRILPSVTNEVITLVKDTSLAFTISVLEMFAVAKALASS 180 >gi|168701474|ref|ZP_02733751.1| Amino acid ABC transporter binding protein and permease protein [Gemmata obscuriglobus UQM 2246] Length = 516 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 110/180 (61%), Gaps = 13/180 (7%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K +W L+ +LL AA +T+ +A SF +++++G +A+ R++ + + + Y Sbjct: 291 KADWGKLLS----ELLRAA-RMTVFLAVTSFPLAMLVGVLVALGRVY-GPWPLRVPLGVY 344 Query: 62 VWIFRGTPLLVQLFVIFYGLP-----HIGIVF--DSFVAIIISLTLNFSAYISEIIRSSI 114 V + RGTPLL+QL+ +FY LP ++GI + + ++ L +N+SAY +E R+ + Sbjct: 345 VEVLRGTPLLLQLYFVFYLLPLLVSKYLGITLPNEPILFGVLGLAINYSAYEAENYRAGL 404 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +++P+GQ +A+ A+G++ +R +I+PQ P++++FI++ K TSV S I I E+ Sbjct: 405 LAVPRGQMEAALALGMSPLTALRVVIVPQAARIVIPPVTNDFIALFKDTSVCSVILIVEL 464 >gi|152970647|ref|YP_001335756.1| amino acid ABC transporter [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895146|ref|YP_002919881.1| amino acid ABC transport system inner membrane component [Klebsiella pneumoniae NTUH-K2044] gi|330012781|ref|ZP_08307485.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|150955496|gb|ABR77526.1| amino acid ABC transporter [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238547463|dbj|BAH63814.1| amino acid ABC transport system inner membrane component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328533704|gb|EGF60398.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 254 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 117/231 (50%), Gaps = 40/231 (17%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---------IISLIMH 59 II+ + L ++T+ I ++ + G + + R+ ++ ++ + Sbjct: 8 IIEEYGPLFVDGALMTIKCTIICVILGTLWGLTLGLGRMAKAEHGPWKYILRYLVQFPVR 67 Query: 60 FYVWIFRGTPLLVQLFVIFYGL------PHIGIV-----------------FDSFVAIII 96 FYV FRGTPL VQ+ V+ + L P G++ + +F++ I+ Sbjct: 68 FYVSAFRGTPLFVQIMVVHFALVPLFINPRDGLLVTSGLMSADFARELRASYGAFLSCIV 127 Query: 97 SLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF 156 ++TLN AY+SEI R+ I SI KGQ +AS A+G+ +T+R +ILPQ PL + Sbjct: 128 AITLNAGAYVSEIFRAGIQSIDKGQMEASRALGMPWWKTMRKVILPQAFRRILPPLGNNA 187 Query: 157 ISILKSTSVASTITIPEIFQTAQRIVSTTY----QPLIIYCELAFVYLILT 203 I+I+K +S+AS I + ++ A R VS Y +P Y ++ VY ++T Sbjct: 188 IAIVKDSSLASAIGLADL-AYAARTVSGAYATYWEP---YLTISLVYWVIT 234 >gi|56697501|ref|YP_167869.1| glutamate/aspartate ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56679238|gb|AAV95904.1| glutamate/aspartate ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 238 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 64/231 (27%), Positives = 123/231 (53%), Gaps = 16/231 (6%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 + W L + + L + + T +A +++V++L +G + V R S + +L+ Y Sbjct: 4 NWNWGVLFEEEYLGWLISGVGWTFSVALVAWVLALAVGILVGVGRTLPSRPV-ALLCTTY 62 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-----------GIVFDSFVAIIISLTLNFSAYISEII 110 V IFR PLLVQLF+ ++ LP I + +V ++ L L ++ ++E + Sbjct: 63 VEIFRNVPLLVQLFLWYFVLPEIVPSDMGRWMKRDMPNPEYVTAVVGLGLYTASRVAEQV 122 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R+ I ++ G A+YA GL+ QT R+++LP + P++SEF++I K++S+A TI Sbjct: 123 RAGINAVGGGLTSAAYANGLSTAQTYRYVLLPISFRLIVPPMTSEFLTIFKNSSLALTIG 182 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + E+ +Q+I T+Q + +Y+++ + C + +I + +HT Sbjct: 183 LLELTAQSQQIAEYTFQGFEAFTAATVIYVVI-ALCATVIAQI---LERHT 229 >gi|255264635|ref|ZP_05343977.1| octopine transport system permease protein OccM [Thalassiobium sp. R2A62] gi|255106970|gb|EET49644.1| octopine transport system permease protein OccM [Thalassiobium sp. R2A62] Length = 245 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 113/207 (54%), Gaps = 18/207 (8%) Query: 32 FVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG--- 85 V+S I+GF +AV + + ++S + V+ FRGTPLLVQL+++++G+ G Sbjct: 43 LVLSSILGFLLAVSLVLGRMSGNAVLSWPSNVLVYCFRGTPLLVQLWIVYFGIGSFGADG 102 Query: 86 -----IVFDSFVAI-IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + F + A+ ++ L LN SAY+SEI+R ++++ KGQ +A+ +IG++ +R I Sbjct: 103 LGPLWVFFKNPWAVGLLVLVLNTSAYVSEILRGGLVNVDKGQMEAAQSIGMSWLTAMRRI 162 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ I + +E + ++K +++ STIT+ ++ + + + + L Y A Y Sbjct: 163 MLPQAIRIAWPAYGNELVLLMKGSALISTITVLDLMGQTRTVFARNFD-LNTYLYAAVFY 221 Query: 200 LILTSFCYIIQIKIESSVTQHTYSVDK 226 LIL I + S Q +S + Sbjct: 222 LILAGI-----ITVFVSAVQRNFSKSR 243 >gi|238751271|ref|ZP_04612765.1| Histidine transport system permease protein hisQ [Yersinia rohdei ATCC 43380] gi|238710545|gb|EEQ02769.1| Histidine transport system permease protein hisQ [Yersinia rohdei ATCC 43380] Length = 228 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 64/229 (27%), Positives = 117/229 (51%), Gaps = 15/229 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D + +L++ +VTL +A S ++S+IIG A ++ S+ ++S + Y + RG Sbjct: 1 MLDGYSKLIFEGALVTLELALCSVLLSVIIGLIGAGGKLS-SNRLLSGLFECYTTLIRGV 59 Query: 69 PLLVQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 P LV + +IFYGL +G I D A II+L + AY +E R + +++ Sbjct: 60 PDLVLMLLIFYGLQITLNSITESLGFSQINIDPLSAGIITLGFIYGAYFTETFRGAYMAV 119 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +A+ A G T Q R I+ P + + + + + ILK+T++ S + + ++ + Sbjct: 120 PMGQIEAAKAFGFTSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKA 179 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 Q TYQP VYLI T+ + + +E ++++ V + Sbjct: 180 TQLAGKGTYQPFFFALVAGVVYLIFTTISNGVLLWLER---RYSHGVKR 225 >gi|213052557|ref|ZP_03345435.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 232 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 115/216 (53%), Gaps = 11/216 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S V+ ++ +AV R+ S+ I + + +IFRGTPL VQL V Sbjct: 17 FTGVAITLWLLISSVVMGGLLAVILAVGRVS-SNKFIRFPIWLFTYIFRGTPLYVQLLVF 75 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 76 YSGMYTLEIVKGTDLLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 135 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 136 YGFSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQ 195 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 P + A +YL+++ + + E QH S Sbjct: 196 PFTAFGIAAVLYLLISYVLISLFRRAERRWLQHVSS 231 >gi|123441654|ref|YP_001005638.1| histidine transport system permease protein HisQ [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088615|emb|CAL11410.1| histidine transport system permease protein HisQ [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 228 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 64/229 (27%), Positives = 117/229 (51%), Gaps = 15/229 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D + +L++ +VTL +A S ++S+IIG A ++ S+ ++S + Y + RG Sbjct: 1 MLDGYSKLIFEGALVTLELALCSVLLSVIIGLIGAGGKLS-SNRLLSGLFECYTTLIRGV 59 Query: 69 PLLVQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 P LV + +IFYGL +G I D A II+L + AY +E R + +++ Sbjct: 60 PDLVLMLLIFYGLQIVLNSITESLGFEQINIDPLSAGIITLGFIYGAYFTETFRGAYMAV 119 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +A+ A G + Q R I+ P + + + + + ILK+T++ S + + ++ + Sbjct: 120 PTGQIEAARAFGFSSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKA 179 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 Q TYQP VYLI T+ I + +E ++++ V + Sbjct: 180 TQLAGKGTYQPFFFALVAGVVYLIFTTLSNGILLWLER---RYSHGVKR 225 >gi|332637353|ref|ZP_08416216.1| ABC transporter amino acid permease protein [Weissella cibaria KACC 11862] Length = 182 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 93/165 (56%), Gaps = 3/165 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF---VAIIISLTLNFSAYISEII 110 + + FYV +FR P +VQ+F+ +YGLP I ++ V +I++L ++AY++E Sbjct: 12 LQAVARFYVSVFRAVPGVVQIFLAYYGLPEIIPALKTWSPEVMVILALGFKYAAYMAETF 71 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R+++ S+ GQW+A+ ++ + + +H++LPQ + + I ILK T++A I Sbjct: 72 RAAVDSVDAGQWEAATSLQINKWAFFKHVMLPQAAVNAIPGFGNYTIGILKETALAFVIG 131 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + E+F + I +++ + +Y +A +Y +L +Q K+E Sbjct: 132 VTELFGEGKLIAGGSFKYMEVYAAVAIIYWLLVVAYSALQNKLER 176 >gi|325678775|ref|ZP_08158373.1| putative arginine ABC transporter, permease protein ArtQ [Ruminococcus albus 8] gi|324109279|gb|EGC03497.1| putative arginine ABC transporter, permease protein ArtQ [Ruminococcus albus 8] Length = 226 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 55/158 (34%), Positives = 94/158 (59%), Gaps = 6/158 (3%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYG---LPHIGIVFD-SFVAIIISLTLNFSAYISEI 109 +SL+ Y+ + RGTPL++QL V+ +G L + I D F A+II +LN++AY +EI Sbjct: 56 LSLLTKLYISVVRGTPLMLQLLVVMFGPYYLFKVPISPDYRFYAVIIGFSLNYAAYFAEI 115 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 RS I ++PKGQ++A +G +R Q I+ PQ + +++E I+++K TS+A I Sbjct: 116 YRSGIQAVPKGQYEACEILGYSRSQRFFKIVFPQMVKNILPSVTNEIITLVKDTSLAFAI 175 Query: 170 TIPEIFQTAQRIVST--TYQPLIIYCELAFVYLILTSF 205 E+F A+++ ++ T PL + +V+ L +F Sbjct: 176 AYTEMFTVAKQVAASQATILPLFVAGLFYYVFNFLVAF 213 >gi|269127883|ref|YP_003301253.1| polar amino acid ABC transporter inner membrane subunit [Thermomonospora curvata DSM 43183] gi|268312841|gb|ACY99215.1| polar amino acid ABC transporter, inner membrane subunit [Thermomonospora curvata DSM 43183] Length = 303 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 119/212 (56%), Gaps = 29/212 (13%) Query: 25 LPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG---- 80 L +A ++ I+L G +A++R+ + ++ Y+W FRGTPL QL + +G Sbjct: 73 LTVAAMAGGIAL--GVVLALMRMS-PNPLLKGAAFVYLWFFRGTPLYTQLLI--WGAIGA 127 Query: 81 -LPHIGI---------------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 +P IGI + + +A + L LN +AY++EI+R+ I+S+ GQ +A Sbjct: 128 LIPTIGIGIPFGPEFHTWQTQKLINVALAAALGLILNEAAYMAEIVRAGILSVDPGQQEA 187 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G++R QT+R I+LPQ + P +E IS+LK+TS+ + + E+ TAQ I ++ Sbjct: 188 ASALGMSRMQTMRRIVLPQAMRVIVPPTGNETISMLKNTSLVAAVPYAELTFTAQTIYAS 247 Query: 185 TYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 TYQ P++I L YL L++ I Q +E Sbjct: 248 TYQIIPMLIMACL--WYLFLSTLLMIGQYYLE 277 >gi|253581221|ref|ZP_04858478.1| polar amino acid ABC transporter [Ruminococcus sp. 5_1_39B_FAA] gi|251847498|gb|EES75471.1| polar amino acid ABC transporter [Ruminococcus sp. 5_1_39BFAA] Length = 219 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 105/182 (57%), Gaps = 2/182 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F I + P + AA +TL +A I ++++++G ++I+ +F ++ I+ Y+ + Sbjct: 3 FEFIREQTPLYIEAA-KLTLHMAVIGVLLAIVVGLVCSMIK-YFRIPVLRQIVECYIELS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL+QLF +++GLP IGIV S I LT +Y++E RS + ++P Q +++ Sbjct: 61 RNTPLLIQLFFLYFGLPKIGIVLSSEQCAITGLTFLGGSYMAEAFRSGLDNVPPIQVESA 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+++ Q +IILPQ ++ S + I ++K TSV S + + ++ + ++ Sbjct: 121 LSLGMSKSQVFTNIILPQAVSNSIPAFCANAIFLIKETSVFSAVALADLMFVTKDLIGIY 180 Query: 186 YQ 187 Y+ Sbjct: 181 YK 182 >gi|206580088|ref|YP_002238062.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288935047|ref|YP_003439106.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|290509109|ref|ZP_06548480.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55] gi|206569146|gb|ACI10922.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288889756|gb|ADC58074.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] gi|289778503|gb|EFD86500.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55] Length = 254 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 117/231 (50%), Gaps = 40/231 (17%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---------IISLIMH 59 II+ + L ++T+ I ++ + G + + R+ ++ ++ + Sbjct: 8 IIEEYGPLFVDGALMTIKCTIICVILGTLWGLTLGLGRMAKAEHGPWKYILRYLVQFPVR 67 Query: 60 FYVWIFRGTPLLVQLFVIFYGL------PHIGIV-----------------FDSFVAIII 96 FYV FRGTPL VQ+ V+ + L P G++ + +F++ I+ Sbjct: 68 FYVSAFRGTPLFVQIMVVHFALVPLFINPRDGLLVTGGLMSADFARELRASYGAFLSCIV 127 Query: 97 SLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF 156 ++TLN AY+SEI R+ I SI KGQ +AS A+G+ +T+R +ILPQ PL + Sbjct: 128 AITLNAGAYVSEIFRAGIQSIDKGQMEASRALGMPWWKTMRKVILPQAFRRILPPLGNNA 187 Query: 157 ISILKSTSVASTITIPEIFQTAQRIVSTTY----QPLIIYCELAFVYLILT 203 I+I+K +S+AS I + ++ A R VS Y +P Y ++ VY ++T Sbjct: 188 IAIVKDSSLASAIGLADL-AYAARTVSGAYATYWEP---YLTISLVYWVIT 234 >gi|209516392|ref|ZP_03265248.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209503154|gb|EEA03154.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 216 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 61/190 (32%), Positives = 106/190 (55%), Gaps = 4/190 (2%) Query: 35 SLIIGFFIAVI---RIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF 91 L+IGFF+ ++ L YV+ FRG P+LVQL +++Y LP GI Sbjct: 28 GLLIGFFVGIVICTARLSRHRAARLAGGAYVFFFRGVPMLVQLLLVYYLLPFAGINVSPA 87 Query: 92 VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP 151 VA I +++L ++YI+EI+R +SIP G +A+ +GL+ T+R I++PQ + Sbjct: 88 VAAISTVSLCSASYIAEILRGGFLSIPPGHLEAARMLGLSPLDTLRRILVPQAFRLTLPS 147 Query: 152 LSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 L +E + ++K++S+ S + + E+ +TAQ I ++TY+PL Y +Y ++ ++ Sbjct: 148 LVNEMVLLIKASSLISVVGVAELTRTAQNIAASTYRPLEAYVAAGLIYFVICGALALVAH 207 Query: 212 KIESSVTQHT 221 E + QH Sbjct: 208 AAEHRL-QHA 216 >gi|88601349|ref|YP_501527.1| amino acid ABC transporter permease [Methanospirillum hungatei JF-1] gi|88186811|gb|ABD39808.1| amino acid ABC transporter membrane protein 1, PAAT family [Methanospirillum hungatei JF-1] Length = 223 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 71/213 (33%), Positives = 126/213 (59%), Gaps = 7/213 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +++ID FP L++ IV+TL + + +I +G +A+ +++ S + S I F VW F Sbjct: 3 LSILIDWFP-YLFSGIVLTLGLVASALIIGAGVGLPLALGQVYGSLPVRSAIATF-VWFF 60 Query: 66 RGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RG P+LV LF+ ++G+ P +G+ +F + L L +AY S++ R +I SI +GQ A Sbjct: 61 RGLPVLVLLFLFYFGIFPALGLDLPAFYVGAVVLGLWGAAYQSQVFRGAIQSISEGQMIA 120 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G++R Q I+ IILPQ + + S+++ IL +SV I + E+ + +IVS Sbjct: 121 ARSLGMSRFQAIKSIILPQALRIALPGWSNQYPEILTESSVCYAIGVAELLTRSSQIVSQ 180 Query: 185 TYQPLIIYCELAFVYLIL----TSFCYIIQIKI 213 TY + IY A ++++L TS ++++ KI Sbjct: 181 TYVTMPIYLACAVIFILLSYAGTSCIHMVEKKI 213 >gi|260662190|ref|ZP_05863086.1| ABC transporter permease component [Lactobacillus fermentum 28-3-CHN] gi|260553573|gb|EEX26465.1| ABC transporter permease component [Lactobacillus fermentum 28-3-CHN] Length = 219 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 98/182 (53%), Gaps = 2/182 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +I S P + ++ TL ++ + V SLI+G +++++ FF ++ + YV I Sbjct: 3 WEIIQQSLP-MFEQGLIATLWLSAVGIVGSLIVGVIVSLVQ-FFRVPVLRQVCTVYVEIS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL+QLF ++Y P IG+ ++ I+ L +Y++E + KGQ + Sbjct: 61 RNTPLLIQLFFLYYAFPVIGLKMNAVTCGIVGLIFLGGSYMAEGFTGGFAGVSKGQLETG 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 AIG+ + Q R+++ PQ S L++ I ++K TS+ S I IPE+ TA ++ Sbjct: 121 KAIGMNQWQLARYVVFPQGFALSMPALAANVIFLIKETSIFSVIAIPELTNTALDLIGLY 180 Query: 186 YQ 187 Y+ Sbjct: 181 YR 182 >gi|319897354|ref|YP_004135550.1| arginine transporter subunit [Haemophilus influenzae F3031] gi|317432859|emb|CBY81224.1| arginine transporter subunit [Haemophilus influenzae F3031] Length = 221 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 118/218 (54%), Gaps = 10/218 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + F L++ A ++TL +A S ++ L + AV+ ++ I M +V + RG Sbjct: 1 MFSDFLSLMFTAALMTLGLAVCSLLLGLFLSLIFAVLE---ANRFIGKPMTVFVALLRGL 57 Query: 69 PLLVQLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 P ++ + ++++G L I F +F + +L+L F+AY S+ +R +I +IPKGQ Sbjct: 58 PEIIVVLLVYFGSTELVEMLTGEYIEFGAFGCGVFALSLIFAAYASQTLRGAIQAIPKGQ 117 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W++ A+GL++ T HI++PQ + LS++++ +LK T++ S I + ++ A I Sbjct: 118 WESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLMHQADLI 177 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + T+QP Y A +YL +T + K+E T+ Sbjct: 178 NTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTR 215 >gi|301169917|emb|CBW29521.1| arginine transporter subunit [Haemophilus influenzae 10810] Length = 221 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 119/224 (53%), Gaps = 10/224 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + F L++ A ++TL +A S ++ L + AV+ ++ + M +V + RG Sbjct: 1 MFSDFLSLMFTAALMTLGLAVCSLLLGLFLSLIFAVLE---ANRFVGKPMTVFVALLRGL 57 Query: 69 PLLVQLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 P ++ + ++++G L I F +F + +L+L F+AY S+ +R +I +IPKGQ Sbjct: 58 PEIIVVLLVYFGSTELVEMLTGEYIEFGAFGCGVFALSLIFAAYASQTLRGAIQAIPKGQ 117 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W++ A+GL++ T HI++PQ + LS++++ +LK T++ S I + ++ A I Sbjct: 118 WESGAALGLSKSYTFIHIVMPQVWRHALPGLSTQWLVLLKDTALVSLIGVDDLMHQADLI 177 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + T+QP Y A +YL +T + K+E T+ V Sbjct: 178 NTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFERGVK 221 >gi|317057053|ref|YP_004105520.1| polar amino acid ABC transporter inner membrane subunit [Ruminococcus albus 7] gi|315449322|gb|ADU22886.1| polar amino acid ABC transporter, inner membrane subunit [Ruminococcus albus 7] Length = 227 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 112/198 (56%), Gaps = 9/198 (4%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L + + + I ++ + +L +G IA R+ +SL++ Y+ I RGTPL++QL Sbjct: 19 QKLMSGVGASFMIFFLTLLFALPLGMLIAFGRMS-KFKPLSLLVKLYISIVRGTPLMLQL 77 Query: 75 FVIFYGLPH--IGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 V+F+G P+ G+ S F A+II +LN++AY +EI R+ I ++PKGQ +A +G Sbjct: 78 LVVFFG-PYYLFGMRTSSEYRFYAVIIGFSLNYAAYFAEIYRAGIQAVPKGQHEACEILG 136 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTYQ 187 ++ Q I+ PQ + +++E I+++K TS+A I E+F A+++ + +T Sbjct: 137 YSKSQKFFKIVFPQMMKNIIPAITNEVITLVKDTSLAFAIAYTEMFTVAKQVAAAQSTIM 196 Query: 188 PLIIYCELAFVYLILTSF 205 PL + +V+ +F Sbjct: 197 PLFVAGLFYYVFNFFVAF 214 >gi|308178222|ref|YP_003917628.1| polar amino acid ABC transporter inner membrane and binding protein subunit [Arthrobacter arilaitensis Re117] gi|307745685|emb|CBT76657.1| polar amino acid ABC transporter, inner membrane and binding protein subunit [Arthrobacter arilaitensis Re117] Length = 489 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 105/185 (56%), Gaps = 3/185 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +F+L++ S P L+ + TL + ISF I++ +G ++I + ++ I +V Sbjct: 275 NFFDLLVKSMPALM-TGLWHTLLVTAISFAIAMALGLVFGFMKIS-GNIVLRGIATTFVN 332 Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 IFRGTPLL+ F+ ++GLP + G + A +++L+LN AY++EI+R I S+ GQ Sbjct: 333 IFRGTPLLLWAFMFYFGLPQLTGWEISVWTAGVLTLSLNAGAYVAEIVRGGIQSVDPGQL 392 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++GL ++++ +++PQ L ++ I LK +S+ I E+ Q+I Sbjct: 393 EASRSLGLGYGKSMQKVVIPQAFKMMTPSLINQLIISLKDSSLLLAIGFTELLYQGQQIY 452 Query: 183 STTYQ 187 + ++ Sbjct: 453 AANFR 457 >gi|311742427|ref|ZP_07716236.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] gi|311314055|gb|EFQ83963.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] Length = 215 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 54/164 (32%), Positives = 94/164 (57%), Gaps = 2/164 (1%) Query: 37 IIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIII 96 ++G I V R+ +++ + YV +FR TPLLV + + +YGLP +GI F F I + Sbjct: 31 VVGVLIGVARVS-PVSVLRRLGSVYVVLFRNTPLLVLILLTYYGLPRVGIDFGFFGNITL 89 Query: 97 SLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF 156 ++ + +A++ E IRS I +P GQ +A+ AIG+ T+ ++LPQ + P++S F Sbjct: 90 AMGVYTAAFVCEAIRSGINGVPIGQAEAARAIGMPFATTMSQVVLPQAVRLVVPPMASVF 149 Query: 157 ISILKSTSVASTITIPE-IFQTAQRIVSTTYQPLIIYCELAFVY 199 I++ K+TS+A+T I E F+ + + ++I+ A Y Sbjct: 150 IALTKNTSLAATFGIAEATFRMNGMLRDNASERVMIFVGFAAGY 193 >gi|237737255|ref|ZP_04567736.1| amino acid ABC transporter permease [Fusobacterium mortiferum ATCC 9817] gi|229421117|gb|EEO36164.1| amino acid ABC transporter permease [Fusobacterium mortiferum ATCC 9817] Length = 236 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 56/160 (35%), Positives = 94/160 (58%), Gaps = 3/160 (1%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII--ISLTLNFSAYISEIIRSSIISIP 118 YV + RGTP +VQL +I L +G + D+ + +I IS +N AY++EIIR+ I + Sbjct: 75 YVDLIRGTPAVVQL-MILANLIFVGSLRDTPILVIAAISFGINSGAYVAEIIRAGIEGLD 133 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A+ A+G+ Q+++ II+PQ + L SEFI++LK TS+ I ++ ++A Sbjct: 134 KGQMEAARALGMNYGQSMKEIIIPQAVKKILPALVSEFITLLKETSIVGFIGGVDLLRSA 193 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 I S TY+ + + F+YLI+T+ ++E + Sbjct: 194 NIITSQTYRGVEPLLAVGFIYLIMTAVFTKFMRRVEKGLK 233 >gi|212213032|ref|YP_002303968.1| arginine transport system permease protein [Coxiella burnetii CbuG_Q212] gi|212011442|gb|ACJ18823.1| arginine transport system permease protein [Coxiella burnetii CbuG_Q212] Length = 223 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 58/173 (33%), Positives = 98/173 (56%), Gaps = 9/173 (5%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEI 109 + +V+I RGTPLLVQ+F+I+YG ++ F II+L +N SAY + + Sbjct: 51 NVFVFIIRGTPLLVQIFIIYYGSGQFHWLRETILWSVLKRPFGCAIIALAINTSAYTTVL 110 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 +R +I SIP GQ +A+ A+GL+R + + II+P+ I S+E I ILK TS+A TI Sbjct: 111 LRGAIRSIPTGQIEAAKALGLSRWKAYQRIIIPRAICIVLPAYSNEVIMILKGTSLAGTI 170 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 T+ +I + +++ TY+ + ++ +Y +L + + +E +T Y Sbjct: 171 TLMDIMGVTRHLIAMTYEVIPLFFLAGIIYFVLNALIMSVFYFLEKKLTFQYY 223 >gi|330875047|gb|EGH09196.1| amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330965314|gb|EGH65574.1| amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 220 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 112/204 (54%), Gaps = 1/204 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 ++L++ + ++ + ++ V +IG ++ + + L + YV + RGTP+ V + Sbjct: 16 EVLWSGFLTSIQCSALAIVAGTLIGMLAGLV-LTYGGFFARLPIRLYVDLIRGTPVFVLV 74 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +FY +P +G +F A I LTL +++SEI+R ++ +IP+GQ +A AIGL Q Sbjct: 75 LAVFYMVPALGWHISAFQAGAIGLTLFCGSHVSEIVRGALQAIPRGQIEAGKAIGLRFNQ 134 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 T+R+++LPQ + + I+K++++ S I + E+ + Q++++ T+ L Y Sbjct: 135 TLRYVLLPQAMRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLF 194 Query: 195 LAFVYLILTSFCYIIQIKIESSVT 218 F++ ++ ++ +IE V Sbjct: 195 AGFLFFLINYAIELLGRQIEKRVA 218 >gi|311106550|ref|YP_003979403.1| glutamine transporter permease GlnP [Achromobacter xylosoxidans A8] gi|310761239|gb|ADP16688.1| glutamine transport system permease protein GlnP [Achromobacter xylosoxidans A8] Length = 198 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 58/172 (33%), Positives = 98/172 (56%), Gaps = 2/172 (1%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG-IVFDSFVA 93 ++G V R + ++S I YV + RGTP++VQ+ I++ LP + I D+ A Sbjct: 13 GFLLGALSGVTRAY-GHPVLSAIAQVYVAVIRGTPIVVQVMFIYFALPLLANIRVDAEWA 71 Query: 94 IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS 153 I++L +N AYISEI+R +++S+ KG +A A+GL + + HII P PL Sbjct: 72 AIVTLIINSGAYISEIVRGALLSVHKGLKEAGQAMGLPFHKILLHIIGPVAFRRMIPPLG 131 Query: 154 SEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSF 205 ++ I LK +S+ I + E+ + Q I+++ ++ + I+ +A VYLILT Sbjct: 132 NQCIISLKDSSLFIVIGVAELTRQGQEIMASNFRAVEIWSAVAIVYLILTGL 183 >gi|326773223|ref|ZP_08232506.1| ABC-type amino acid transport system, permease component [Actinomyces viscosus C505] gi|326636453|gb|EGE37356.1| ABC-type amino acid transport system, permease component [Actinomyces viscosus C505] Length = 321 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 74/219 (33%), Positives = 117/219 (53%), Gaps = 30/219 (13%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+ TL + ++ I +++ A++R S+ ++ + Y+W FRGTP+ QL +F+ Sbjct: 66 AVGWTLLLTFMAMAIGIVLAVTTAILRQS-SNPVLRWVALAYLWFFRGTPIYTQL--VFW 122 Query: 80 GLPH-------IGI-------------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 G +GI VF FVA ++ L +N AY+SEI+RS + S+ K Sbjct: 123 GALSALYQKLSLGIPFGPELLTFKTTTVFTPFVAAVLGLGINEGAYLSEIVRSGLNSVDK 182 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS--VASTITIPEIFQT 177 GQ +A+ A+G++R Q +R I+LPQ + P +E IS+LK+TS +A T+ F T Sbjct: 183 GQSEAAGALGMSRGQILRRIVLPQAMRVIVPPTGNETISMLKTTSLVLAVPFTLDLTFVT 242 Query: 178 AQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 S TYQ PL++ A Y+I+TS + Q IE Sbjct: 243 -NSYASLTYQIIPLLLVA--AIWYIIITSILMVGQHYIE 278 >gi|300870920|ref|YP_003785791.1| amino acid transport system permease [Brachyspira pilosicoli 95/1000] gi|300688619|gb|ADK31290.1| amino acid transport system permease protein [Brachyspira pilosicoli 95/1000] Length = 237 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 114/200 (57%), Gaps = 14/200 (7%) Query: 33 VISLIIGFFIAVIRI-----------FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 +I +++G FIA++++ F + IS + YV + RGTP +VQL +I+ + Sbjct: 37 LIGIVLGIFIALMQLSHIYPLKNIKGFETFNPISKLAFGYVNLIRGTPAVVQL-MIWANV 95 Query: 82 PHIGIVFDSFVAII--ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 +G + ++ + II I+ +N +AY++EIIR+ I + KGQ +AS A+GL +++ I Sbjct: 96 VFVGALRNTPILIISAIAFGINSAAYVAEIIRAGIEGLDKGQMEASRALGLNYGLSMKEI 155 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I+PQ I L SEFI+++K TS+ I ++ ++A I S TY+ + + +Y Sbjct: 156 IIPQAIKKILPALVSEFITLIKETSIVGFIGGVDLLRSANIITSQTYRGVEPLIAVGIIY 215 Query: 200 LILTSFCYIIQIKIESSVTQ 219 LILTS + K+E + + Sbjct: 216 LILTSIFAMFMRKVEKGLKE 235 >gi|227820462|ref|YP_002824433.1| ABC transporter permease [Sinorhizobium fredii NGR234] gi|227339461|gb|ACP23680.1| putative permease component of ABC transporter [Sinorhizobium fredii NGR234] Length = 219 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 109/198 (55%), Gaps = 5/198 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 +D F LL++ + T+ + I+ + ++GF +A+ R + + Y+ I +G P Sbjct: 8 LDQFGFLLFS-LQWTILLTVIALIGGGLLGFAVALARTS-QLKPVRIAAASYIQIIQGIP 65 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +L+ LF+ +YGL G +A S+T+ S Y++EI R I ++PK QW+AS ++ Sbjct: 66 VLMILFLSYYGLSLAGFELPPLIAAGASMTIYASGYLAEIWRGCIQAVPKQQWEASESLA 125 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 +TR Q R++ILPQ + P + ++K+TS+ S I E+ + Q I + T+QP Sbjct: 126 MTRLQQYRYVILPQAMRICLPPTVGFAVQVVKNTSITSIIGFVELARAGQLINNATFQPF 185 Query: 190 IIYCELAFVYLILTSFCY 207 ++ +A +Y ++ CY Sbjct: 186 RVFLAVAALYFVV---CY 200 >gi|331017447|gb|EGH97503.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 232 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 114/207 (55%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N+I DS P L + ++ TL + IS L+ + ++R+ + +++ Y ++ Sbjct: 5 YNVIWDSLP-LYFGGLLTTLKLLAISLAFGLLAALPLGLMRVS-KNLWVNMPAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +SF+ ++ +N SAY +EII S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFAAVRESFLWPWLSSATFCACLAFAINTSAYTAEIIAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G+++ + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPAGEIEAARAMGMSKVKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + Y P Y YL LT Sbjct: 183 AARTVNAQFYLPFEAYVTAGVFYLCLT 209 >gi|329938379|ref|ZP_08287804.1| putative ABC transporter permease protein [Streptomyces griseoaurantiacus M045] gi|329302352|gb|EGG46243.1| putative ABC transporter permease protein [Streptomyces griseoaurantiacus M045] Length = 341 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/188 (32%), Positives = 107/188 (56%), Gaps = 23/188 (12%) Query: 32 FVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF-----YGLPHIGI 86 V+ ++G +AV+R+ ++ ++ + YVWIFR TPLLVQL F Y +G+ Sbjct: 97 MVLGFLLGTVLAVMRLS-ANPVLRTLSWGYVWIFRSTPLLVQLLFWFNIGALYPTLGLGV 155 Query: 87 VFD-SFVAI------------IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 F FV + +I LTL+ +AY +E++R I+S+ GQ +A+ A+GL+R+ Sbjct: 156 PFGPQFVTVKTVNLLGPTLTAVIGLTLHETAYAAEVVRGGILSVDPGQTEAAQALGLSRR 215 Query: 134 QTIRHIILPQTITTSAVPLSSE-FISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLI 190 +T+R I++PQ + S VP + I LK TS+ S + + ++ + Q + + TYQ PL+ Sbjct: 216 RTLRRIVVPQAM-RSIVPTAGNMLIGTLKGTSIVSVLAVHDLLYSVQLVYNQTYQVIPLL 274 Query: 191 IYCELAFV 198 + L ++ Sbjct: 275 MVATLWYI 282 >gi|91789814|ref|YP_550766.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91699039|gb|ABE45868.1| amino acid ABC transporter membrane protein 2, PAAT family [Polaromonas sp. JS666] Length = 219 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 100/171 (58%), Gaps = 4/171 (2%) Query: 37 IIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIII 96 +IG F A+ R+ ++ + + + Y+ + +G P+L+ LF+ ++GL ++G + V I Sbjct: 34 VIGAFFAIARVSHNNLLRNAAV-LYIQVLQGLPVLLVLFLAYFGLAYMGFDPPALVIATI 92 Query: 97 SLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF 156 +L L AY+++I R ++ S+P QW+AS ++ +TR Q R IILPQ++ S P Sbjct: 93 ALGLYAGAYLADIWRGAMESVPYQQWEASSSLAMTRAQQFRFIILPQSVRISLPPTVGFL 152 Query: 157 ISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + ++K+TS+ S + ++ + + I ++ + P ++Y +A +Y S C+ Sbjct: 153 VQLIKNTSIVSVVGYIDLMRAGEHIETSLHSPFMVYGIVALLYF---SLCF 200 >gi|320535581|ref|ZP_08035678.1| ABC transporter, permease protein [Treponema phagedenis F0421] gi|320147544|gb|EFW39063.1| ABC transporter, permease protein [Treponema phagedenis F0421] Length = 270 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 118/221 (53%), Gaps = 26/221 (11%) Query: 8 LIIDSFPQLLYA---AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 L+ +S+ + +A ++ TL +A +++++S+ G + + R + L+ Y+ + Sbjct: 32 LVNESYRSIFFAVASGLITTLLVAIVAYILSIFFGLLLGLARASHIRWLKELVT-VYIEL 90 Query: 65 FRGTPLLVQLFVI-FYGLPHIGIVFDSFVA---------------------IIISLTLNF 102 RG P+LV L+ I F +P I V ++ A II+L L + Sbjct: 91 VRGLPMLVILYYIAFVAVPAISSVLNAVFAPLINAEIMEGFSPRSFSFALLAIIALVLGY 150 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 SA+I+EI R+ I S+ KGQ +A+ A+GLT+ QT+ HIILPQ L++EFI+++K Sbjct: 151 SAFIAEIFRAGIESVDKGQVEAASALGLTKTQTMIHIILPQATRNILPALANEFIAVIKD 210 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +S+ S + + +I Q + S T+ Y +AF YL LT Sbjct: 211 SSLVSVLGVQDITQIGKVYSSATFLFFETYNVVAFFYLCLT 251 >gi|302539849|ref|ZP_07292191.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease [Streptomyces hygroscopicus ATCC 53653] gi|302457467|gb|EFL20560.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease [Streptomyces himastatinicus ATCC 53653] Length = 330 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/191 (32%), Positives = 106/191 (55%), Gaps = 23/191 (12%) Query: 29 CISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL---FVIFYGLPHIG 85 + V+ ++G +AV+R+ ++ +++ + YVWIFR TPLLVQL F I P +G Sbjct: 97 AVVMVLGFLLGTLVAVMRLS-ANPVLATLSWGYVWIFRSTPLLVQLLFWFNIGALYPTLG 155 Query: 86 I---------------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 I +F + +I LTL+ +AY +E++R I+S+ GQ A+ A+GL Sbjct: 156 IGVPFGPEFITVKTVNLFGPALTAVIGLTLHEAAYAAEVVRGGILSVDSGQTQAAQALGL 215 Query: 131 TRKQTIRHIILPQTITTSAVPLSSE-FISILKSTSVASTITIPEIFQTAQRIVSTTYQ-- 187 R +T+R I++PQ + S VP + I LK TS+ S + + ++ + Q + + TYQ Sbjct: 216 GRWRTLRRIVVPQAM-RSIVPTAGNMLIGTLKGTSIVSVLAVHDLLYSVQLVYNQTYQVI 274 Query: 188 PLIIYCELAFV 198 PL++ L ++ Sbjct: 275 PLLMVATLWYI 285 >gi|125624757|ref|YP_001033240.1| glutamate ABC transporter permease protein [Lactococcus lactis subsp. cremoris MG1363] gi|124493565|emb|CAL98550.1| glutamate ABC transporter permease protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071557|gb|ADJ60957.1| glutamate ABC transporter permease protein [Lactococcus lactis subsp. cremoris NZ9000] Length = 228 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 112/196 (57%), Gaps = 15/196 (7%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVI 77 ++VT+ I+ +I ++G A+ +I I L + + Y+ IFRGTP+LVQ+ + Sbjct: 16 GMIVTIFISAFVVLIGTLLGIVTALAKI---SKIAPLRWLANIYIEIFRGTPMLVQIMLG 72 Query: 78 FY-----GLP--HIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 F LP +GI+ + II ++LN AY++EI+R+ I ++P GQ +A+Y+ Sbjct: 73 FGLMGSISLPTFQVGILQQDLGRLIPGIIVISLNSGAYMAEIVRAGIEAVPLGQKEAAYS 132 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ +Q + +ILPQ + + +EF++I+K +S+ TI + E+F AQ + + TYQ Sbjct: 133 LGIRPRQAMTTVILPQALRNILPAVGNEFVTIIKDSSLLYTIGVMEVFNGAQTVANLTYQ 192 Query: 188 PLIIYCELAFVYLILT 203 + +A Y ++T Sbjct: 193 TISPMIFVALYYFVVT 208 >gi|326423793|ref|NP_759985.2| putative amino acid ABC transporter permease [Vibrio vulnificus CMCP6] gi|319999159|gb|AAO09512.2| Putative amino acid ABC transporter, permease protein [Vibrio vulnificus CMCP6] Length = 246 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 108/199 (54%), Gaps = 9/199 (4%) Query: 2 KYEWFNLIID-------SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII 54 Y+W ++D + + L A T+ ++ +S + ++ +G +A+ + ++ Sbjct: 19 DYQWGWYVLDPTTEQGLTNVKFLIAGFADTISVSLLSMLFAMTLGLMVALPALSPRKSLQ 78 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 L YV + R P+LV L ++YGLP + + D + A II+LT+ SA+++E+ R Sbjct: 79 RL-NRIYVEVIRAIPVLVLLLWVYYGLPTLLDVSLDHYWAGIIALTIAESAFMAEVFRGG 137 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SI +GQ +A+ ++GL Q +R +ILPQ L ++F+ ILK +S+ S I + + Sbjct: 138 IQSIGRGQHEAAKSLGLNYWQKMRLVILPQAFRQMLPALGNQFVYILKMSSLVSVIGLSD 197 Query: 174 IFQTAQRIVSTTYQPLIIY 192 + + A +V Y PL IY Sbjct: 198 LTRRANELVVNEYLPLEIY 216 >gi|330950140|gb|EGH50400.1| amino acid ABC transporter ATP-binding protein [Pseudomonas syringae Cit 7] Length = 403 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 117/216 (54%), Gaps = 8/216 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +EW Q + A + + ++ +S+ L +GF +A R+ + + + Sbjct: 1 MAFEWAYFFSLFSVQAFWKACLTVVQLSVLSWTAGLALGFLLASARLS-THAWLRVPASL 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 Y+W+FR PLLV L V Y LP + ++ F + +I+L L +AY++EI R ++ Sbjct: 60 YIWLFRSIPLLV-LLVFVYNLPQLFPASSSVLSQPFYSGLIALVLTETAYMAEIHRGGLL 118 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ KGQ +A+ A+G+ R +++PQ I S L++E+++I+K TS+ S I++ E+ Sbjct: 119 SVLKGQREAARALGIRGLGAQRLVVIPQAIRISLPTLTNEYVTIVKLTSLVSVISLNELL 178 Query: 176 QTAQRIVSTTYQPLIIYCELAFVY-LILTSFCYIIQ 210 QR+ + + L +A Y LI+T F +++Q Sbjct: 179 LVGQRLYAQNFLVLETLAAVAMYYVLIVTLFGWLLQ 214 >gi|261247558|emb|CBG25385.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] Length = 235 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 115/216 (53%), Gaps = 11/216 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S V+ ++ +AV R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLISSVVMGGLLAVILAVGRVS-SNKFIRFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTDLLNTFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 P + A +YL+++ + + E QH S Sbjct: 199 PFTAFGIAAVLYLLISYVLISLFRRAERRWLQHVSS 234 >gi|258404611|ref|YP_003197353.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] gi|257796838|gb|ACV67775.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] Length = 293 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 100/168 (59%), Gaps = 6/168 (3%) Query: 48 FFSDTII-SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYI 106 FFSD ++ SL + V R PL ++ + + P + ++ +++L L AYI Sbjct: 124 FFSDQLLPSLGLQEMV--GRFPPLAQKIIALVFAEPA---QLMTTISAVVTLALYEGAYI 178 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EI+RS I SI +GQW+A+YA+GL++ + +R++ILPQ + PL+ +FIS +K +++ Sbjct: 179 TEIVRSGIQSIERGQWEAAYALGLSKFEQLRYVILPQAVRRVIPPLTGQFISTIKDSAIV 238 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S I++PE+ +++ TY ++ + +Y +LT C ++ +IE Sbjct: 239 SVISVPELTFQGMELMAATYLTFEVWITVTVLYFLLTFSCSLLARRIE 286 >gi|238762602|ref|ZP_04623572.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia kristensenii ATCC 33638] gi|238699247|gb|EEP91994.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia kristensenii ATCC 33638] Length = 231 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 110/209 (52%), Gaps = 19/209 (9%) Query: 14 PQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIF---FSDTIISLIMHFYVWIFRGT 68 P LY + + L + F++S++ G +A++ F ++ ++ + FR T Sbjct: 2 PTFLYSDGSDMTGLAVTAKLFLLSVVPGLLLALVMAIGQAFGPRPLAWLIRSVTYFFRST 61 Query: 69 PLLVQLFVIFYGLPHIGIV--------------FDSFVAIIISLTLNFSAYISEIIRSSI 114 PL +QL +I+YGL IV D+ ++L LN SAY++E++ + Sbjct: 62 PLYLQLMLIYYGLSQFDIVQLGWQDDQPFWLLFRDATFCATLALVLNTSAYVAELLAGMM 121 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ P+ +W A A G+++ Q IR ++LP T+ L++E + +L +TS+AST+T+ +I Sbjct: 122 VTFPRQEWVAGEAFGMSQWQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTVTLLDI 181 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + TY P I + A +YL+ T Sbjct: 182 TGVARAFYAATYSPFIPFLMAAALYLLCT 210 >gi|258406274|ref|YP_003199016.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] gi|257798501|gb|ACV69438.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] Length = 233 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 67/198 (33%), Positives = 116/198 (58%), Gaps = 16/198 (8%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF- 60 +++W ++ + + + ++ TL I+ +S V+SL++G IAV R+ + + + F Sbjct: 4 QFDWKLVVSGEYGEWIIQGLITTLQISAVSIVLSLVVGTIIAVFRL----SKVKPLEWFS 59 Query: 61 --YVWIFRGTPLLVQLFVIFYG----LPHI--GIVFD---SFVAIIISLTLNFSAYISEI 109 Y FR TPLL+Q+F ++G LP +++ F A +I+LT+ SA+I+E Sbjct: 60 LAYTEFFRNTPLLIQIFFWYFGSNSVLPQFVNEWLYEQNFEFAAGVIALTVYTSAFIAEE 119 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IRS I SIPK Q +++ A GLT Q++R IILPQ PL S+F+++ K++S+ TI Sbjct: 120 IRSGIFSIPKTQLESARASGLTFIQSMRFIILPQAYRIIIPPLISQFLNLTKNSSLVMTI 179 Query: 170 TIPEIFQTAQRIVSTTYQ 187 + ++ A++I S T+ Sbjct: 180 GVMDLTYMARQIESYTFH 197 >gi|37681432|ref|NP_936041.1| ABC-type glutamine transport system, permease component [Vibrio vulnificus YJ016] gi|37200184|dbj|BAC96012.1| ABC-type glutamine transport system, permease component [Vibrio vulnificus YJ016] Length = 246 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 108/199 (54%), Gaps = 9/199 (4%) Query: 2 KYEWFNLIID-------SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII 54 Y+W ++D + + L A T+ ++ +S + ++ +G +A+ + ++ Sbjct: 19 DYQWGWYVLDPTTEQGLTNVKFLIAGFADTISVSLLSMLFAMTLGLMVALPALSPRKSLQ 78 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 L YV + R P+LV L ++YGLP + + D + A II+LT+ SA+++E+ R Sbjct: 79 RL-NRIYVEVIRAIPVLVLLLWVYYGLPTLLDVSLDHYWAGIIALTIAESAFMAEVFRGG 137 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SI +GQ +A+ ++GL Q +R +ILPQ L ++F+ ILK +S+ S I + + Sbjct: 138 IQSIGRGQHEAAKSLGLNYWQKMRLVILPQAFRQMLPALGNQFVYILKMSSLVSVIGLSD 197 Query: 174 IFQTAQRIVSTTYQPLIIY 192 + + A +V Y PL IY Sbjct: 198 LTRRANELVVNEYLPLEIY 216 >gi|332162410|ref|YP_004298987.1| histidine transport system permease protein HisQ [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606495|emb|CBY27993.1| histidine ABC transporter, permease protein HisQ [Yersinia enterocolitica subsp. palearctica Y11] gi|325666640|gb|ADZ43284.1| histidine transport system permease protein HisQ [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863722|emb|CBX73823.1| histidine transport system permease protein hisQ [Yersinia enterocolitica W22703] Length = 228 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 64/229 (27%), Positives = 117/229 (51%), Gaps = 15/229 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D + +L++ +VTL +A S ++S+IIG A ++ S+ ++S + Y + RG Sbjct: 1 MLDGYSKLIFEGALVTLELALCSVLLSVIIGLIGAGGKLS-SNRLLSGLFECYTTLIRGV 59 Query: 69 PLLVQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 P LV + +IFYGL +G I D A II+L + AY +E R + +++ Sbjct: 60 PDLVLMLLIFYGLQIVLNSITESLGFAQINIDPLSAGIITLGFIYGAYFTETFRGAYMAV 119 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +A+ A G + Q R I+ P + + + + + ILK+T++ S + + ++ + Sbjct: 120 PTGQIEAARAFGFSSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKA 179 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 Q TYQP VYLI T+ I + +E ++++ V + Sbjct: 180 TQLAGKGTYQPFFFALVAGVVYLIFTTLSNGILLWLER---RYSHGVKR 225 >gi|146311035|ref|YP_001176109.1| arginine transporter permease subunit ArtM [Enterobacter sp. 638] gi|145317911|gb|ABP60058.1| L-arginine ABC transporter membrane protein [Enterobacter sp. 638] Length = 222 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 122/218 (55%), Gaps = 14/218 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ P+L+ + +L + S V++LI+ ++ + ++ I+ Y+ +F GT Sbjct: 1 MLEYLPELM-KGLHTSLTLTVASIVVALILALIFTIV-LTLKTPVLVWIVRAYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPTLQEYPVIWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW + A+G+++K T+ I+LP + S+E + + KSTS+A TIT+ E+ Sbjct: 119 EGQWQSCGALGMSKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 Q + TY ++++ VYLI+ ++ IE+ Sbjct: 178 QLLYGRTYD-VMVFGAAGLVYLIVNGLLTLMMRLIENK 214 >gi|296103154|ref|YP_003613300.1| arginine transporter permease subunit ArtM [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057613|gb|ADF62351.1| arginine transporter permease subunit ArtM [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 222 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 121/218 (55%), Gaps = 14/218 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D P+L+ + +L + S +++LI+ +I + ++ I+ Y+ +F GT Sbjct: 1 MLDYLPELM-KGLHTSLTLTVASIIVALILALIFTII-LTLKTPVLVWIVRGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPSLQEYPVIWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW + A+G+++K T+ I+LP + S+E + + KSTS+A TIT+ E+ Sbjct: 119 EGQWQSCGALGMSKKDTL-AILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 Q + TY ++++ VYL++ ++ IE Sbjct: 178 QLLYGRTYD-VMVFGAAGVVYLVVNGLLTLMMRLIERK 214 >gi|218512654|ref|ZP_03509494.1| probable amino acid ABC transporter, permease protein [Rhizobium etli 8C-3] Length = 172 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 50/145 (34%), Positives = 89/145 (61%), Gaps = 2/145 (1%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 + Y+ +F+ TPLL+QLFV +YG+ +G+ +++A I LT + SA++ EI R I ++P Sbjct: 20 YLYIEVFQATPLLMQLFVFYYGVALVGLDVSAWIAAAIGLTAHSSAFLGEIWRGGIEAVP 79 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF-ISILKSTSVASTITIPEIFQT 177 GQ +A+ A+GL + + ++LPQ S +P + F + ++K TS+ + I E+ + Sbjct: 80 LGQTEAARALGLPYRHRMLDVVLPQAFKIS-LPATIGFLVGLVKGTSLVAIIGFTELTRA 138 Query: 178 AQRIVSTTYQPLIIYCELAFVYLIL 202 Q I + T+QPLI++ + +Y L Sbjct: 139 GQIISNNTFQPLIVFGMVGAIYFAL 163 >gi|325068922|ref|ZP_08127595.1| polar amino acid ABC transporter inner membrane subunit [Actinomyces oris K20] Length = 321 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 74/219 (33%), Positives = 117/219 (53%), Gaps = 30/219 (13%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+ TL + ++ I +++ A++R S+ ++ + Y+W FRGTP+ QL +F+ Sbjct: 66 AVGWTLLLTFMAMAIGIVLAVTTAILRQS-SNPVLRWVALAYLWFFRGTPIYTQL--VFW 122 Query: 80 GLPH-------IGI-------------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 G +GI VF FVA ++ L +N AY+SEI+RS + S+ K Sbjct: 123 GALSALYQKLSLGIPFGPELLTFKTTTVFTPFVAAVLGLGINEGAYLSEIVRSGLNSVDK 182 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS--VASTITIPEIFQT 177 GQ +A+ A+G++R Q +R I+LPQ + P +E IS+LK+TS +A T+ F T Sbjct: 183 GQSEAAGALGMSRGQILRRIVLPQAMRVIVPPTGNETISMLKTTSLVLAVPFTLDLTFVT 242 Query: 178 AQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 S TYQ PL++ A Y+I+TS + Q IE Sbjct: 243 -NSYASLTYQIIPLLLVA--AIWYIIITSILMVGQHYIE 278 >gi|302549232|ref|ZP_07301574.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces viridochromogenes DSM 40736] gi|302466850|gb|EFL29943.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces viridochromogenes DSM 40736] Length = 310 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 74/244 (30%), Positives = 124/244 (50%), Gaps = 26/244 (10%) Query: 3 YEWFNLIID-SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 +EW N+ D F + + A+ VTL + + V+ ++G IA +R+ S ++S + Y Sbjct: 54 WEW-NVFRDYVFSETIVQAVWVTLQLTAYATVLGFLLGTVIAFMRLSRSP-VLSTVAWTY 111 Query: 62 VWIFRGTPLLVQLFVIFY----------GLPHIGIVF---DSFV------AIIISLTLNF 102 +WIFR P++VQL F G+P G VF DS A +I LTL+ Sbjct: 112 IWIFRSIPMIVQLVFWFNLSALYEELGLGIP-FGPVFVSVDSNTLIGTIGAAVIGLTLHQ 170 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +EI+R ++++ GQ +A+ A+G+ R + IR I+LPQ + +E I +LK Sbjct: 171 AAYAAEIVRGGVLAVDHGQLEAAAALGIPRLRQIRRIVLPQAMRAILPTAGNEIIGLLKG 230 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 TSV ++I E+F Q I + + + Y++LTS + Q +E ++ Sbjct: 231 TSVVYVMSIGELFYQVQVIYGRNGRVVPLLLVATAWYVVLTSLLSVAQYYVER---RYAR 287 Query: 223 SVDK 226 D+ Sbjct: 288 GADR 291 >gi|257784250|ref|YP_003179467.1| polar amino acid ABC transporter, inner membrane subunit [Atopobium parvulum DSM 20469] gi|257472757|gb|ACV50876.1| polar amino acid ABC transporter, inner membrane subunit [Atopobium parvulum DSM 20469] Length = 217 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 106/185 (57%), Gaps = 5/185 (2%) Query: 4 EWFNLIIDSFPQLLYA-AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 +W + I + P LYA A +TL I+ + SLI+G A I + I+S + YV Sbjct: 2 DW-SFIGEHLP--LYAEAAKITLTISFFGVIFSLIVGLISAQISLS-KIPILSQLNSVYV 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTPLL+QLF+I++GL +G+ D+ A ++ LT +Y++E R+ S+ Q+ Sbjct: 58 ELSRGTPLLIQLFLIYFGLTKVGLKMDAEAAAVVGLTFLGGSYMAEAFRAGFESVAAIQF 117 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +++ +GL++ QT++H+ILPQ ++ + + I ++K +SV S I + ++ + I+ Sbjct: 118 ESAQVLGLSKIQTLQHVILPQALSVAVPGFVANVIFLIKESSVVSGIALADLMYVTKDII 177 Query: 183 STTYQ 187 Y Sbjct: 178 GMQYD 182 >gi|229816579|ref|ZP_04446878.1| hypothetical protein COLINT_03637 [Collinsella intestinalis DSM 13280] gi|229807914|gb|EEP43717.1| hypothetical protein COLINT_03637 [Collinsella intestinalis DSM 13280] Length = 247 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 107/176 (60%), Gaps = 9/176 (5%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-FFSDTIISLIMHFYVWIFRGTPLLVQ 73 Q+L + +L I ++ V +L +G + +R+ F+ + LI Y+ + RGTPL++Q Sbjct: 38 QMLGEGFITSLQIFALTLVGALPLGVVVVALRMCRFAP--VRLIARAYISVMRGTPLMLQ 95 Query: 74 LFVIFYGLPH--IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +F I++ +P G+ + A + + +N++AY +EI RS + S+P+GQ++A+ + Sbjct: 96 MFAIYF-MPFYVFGVQLTPSSKWQAAVFAFIVNYAAYFAEIYRSGLQSVPRGQYEAAEVL 154 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 G ++ QT+ HI++PQ + + +E I+++K TS+A I + E+F TA+ +V++ Sbjct: 155 GYSKFQTLVHIVVPQVVKRIMPAIGNEVITLVKDTSLAFAIGVGEMFSTAKALVAS 210 >gi|229028440|ref|ZP_04184562.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1271] gi|228732889|gb|EEL83749.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1271] Length = 218 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 104/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ + +V R PL++ F+ ++ LP IGI Sbjct: 25 SVIALIGSFILGIILAVMRIA-PIRILNWLGTAFVEFVRNIPLVLIAFIFYFALPVIGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA +LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + +++LPQ + Sbjct: 84 LNGFVAGTATLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYVQAMYYVVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|184155296|ref|YP_001843636.1| ABC transporter permease component [Lactobacillus fermentum IFO 3956] gi|183226640|dbj|BAG27156.1| ABC transporter permease component [Lactobacillus fermentum IFO 3956] Length = 219 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 98/182 (53%), Gaps = 2/182 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +I S P + ++ TL ++ + V SLI+G +++++ FF ++ + YV I Sbjct: 3 WEVIQQSLP-MFEQGLIATLWLSAVGIVGSLIVGVIVSLVQ-FFRVPVLRQVCTVYVEIS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL+QLF ++Y P IG+ ++ I+ L +Y++E + KGQ + Sbjct: 61 RNTPLLIQLFFLYYAFPVIGLKMNAVTCGIVGLIFLGGSYMAEGFTGGFAGVSKGQLETG 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 AIG+ + Q R+++ PQ S L++ I ++K TS+ S I IPE+ TA ++ Sbjct: 121 KAIGMNQWQLARYVVFPQGFALSMPALAANVIFLIKETSIFSVIAIPELTNTALDLIGLY 180 Query: 186 YQ 187 Y+ Sbjct: 181 YR 182 >gi|91789745|ref|YP_550697.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91698970|gb|ABE45799.1| amino acid ABC transporter membrane protein 1, PAAT family [Polaromonas sp. JS666] Length = 240 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 115/209 (55%), Gaps = 8/209 (3%) Query: 1 MKYEWFNLIID-----SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS 55 M ++W + D ++ Q + A TL +A S+V+++++G + +R + + Sbjct: 1 MTWDWQVFLNDDGSGRTYLQWMMDAWGWTLSVAGCSWVVAIVMGGIMGTLRTLPNSPWLV 60 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD---SFVAIIISLTLNFSAYISEIIRS 112 + + +V +FR PLLVQ+F+ ++ +P + FV ++ +L SA I+E +R+ Sbjct: 61 RLANVWVEVFRNVPLLVQIFIWYFVIPKMFPAMRDLPGFVLVVFALGFFTSARIAEQVRA 120 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + ++P+GQ A A+G T QT R++ILP I PL+SE +++LK++SVA ++I Sbjct: 121 GVQALPRGQRYAGMAMGFTTAQTYRYVILPMAIRIIIPPLTSESMNLLKNSSVAFAVSIA 180 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 E+ A + T + + IY + +Y + Sbjct: 181 ELTMFAMQAQEETSRGVEIYLAVTALYAV 209 >gi|319405830|emb|CBI79462.1| ABC transporter, permease protein [Bartonella sp. AR 15-3] Length = 235 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 129/232 (55%), Gaps = 17/232 (7%) Query: 4 EW----FN-LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 EW FN +++ + L+ +VTL + IS I L++G I +IR+ ++ + + Sbjct: 4 EWPYFLFNPVLLSRYSLKLFDGFIVTLKLVSISCSIGLLLGILITLIRVS-NNKPLQYLA 62 Query: 59 HFYVWIFRGTPLLVQLFVIFYGL-------PHIGIVF---DSFVAIIISLTLNFSAYISE 108 Y++ FR +PLL QLF+ +YGL IG+ + +++ + +LN SAY +E Sbjct: 63 RAYIYFFRSSPLLAQLFLFYYGLGSLSSFWQQIGLWWFFQNAWYCCLFIFSLNSSAYQAE 122 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I R S++++ Q +AS A+GL R II PQ + + PL +EFI + KS+++AS Sbjct: 123 IFRGSLLAVATEQREASKALGLDRFTIFFKIIFPQAMVAALRPLGNEFILMTKSSAIASL 182 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +T+ ++ T + I S T+ +Y A +YLI+ F + + I IE +T++ Sbjct: 183 VTVYDLMGTTKLIYSRTFD-FQVYVWAAIIYLIIVEFIHRVIILIEHYLTRY 233 >gi|290960129|ref|YP_003491311.1| binding-protein-dependent ABC transporter transmembrane protein [Streptomyces scabiei 87.22] gi|260649655|emb|CBG72770.1| putative binding-protein-dependent transport system integral membrane component [Streptomyces scabiei 87.22] Length = 216 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 73/122 (59%) Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLLVQLF +FY LP G+ + ++ L L++S Y +E+ R+ I +P GQW+A+ Sbjct: 63 RNTPLLVQLFFLFYVLPEWGLTLSALATGVLGLGLHYSTYTAEVYRAGIDGVPAGQWEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+ L R +T +ILPQ + A L + I++LK + + TI + E+ A++ S T Sbjct: 123 TALSLPRSRTWTAVILPQALRRVAPALGNYVIAMLKDSPMLMTIGVLEMLGEARQFGSRT 182 Query: 186 YQ 187 +Q Sbjct: 183 FQ 184 >gi|71734611|ref|YP_272589.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|257481839|ref|ZP_05635880.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289624458|ref|ZP_06457412.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651581|ref|ZP_06482924.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|71555164|gb|AAZ34375.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322171|gb|EFW78267.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320331822|gb|EFW87760.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330866608|gb|EGH01317.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330986784|gb|EGH84887.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009474|gb|EGH89530.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 221 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 108/204 (52%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F ++ + LL A+ TL + I ++ + +G AV+R + + I Sbjct: 1 MAYHFDFTPVLQNIDVLLRGALF-TLELTAIGTLLGVSLGIVGAVVRAWKIQPFAT-IFA 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TP LVQLF IF+GLP +G+ + A ++++ +N AY +EIIR+ I +IPK Sbjct: 59 IYVELIRNTPFLVQLFFIFFGLPSLGVQISEWQAAVLAMVINLGAYSTEIIRAGIQAIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +AS A+ + R + R+++L + LSS+ I ++ ++V S I E+ A Sbjct: 119 GQLEASAALAMNRYEAFRYVVLVPALGKVWPALSSQIIIVMLGSAVCSQIATEELSFFAN 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I S ++ Y +YL + Sbjct: 179 FIQSRNFRSFETYIVTTLIYLAMA 202 >gi|238793126|ref|ZP_04636754.1| Binding-protein-dependent transport system inner membrane component [Yersinia intermedia ATCC 29909] gi|238727499|gb|EEQ19025.1| Binding-protein-dependent transport system inner membrane component [Yersinia intermedia ATCC 29909] Length = 245 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 110/203 (54%), Gaps = 29/203 (14%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWI 64 L+ + L+ ++TL I+ + V + ++GF +A R D+ + + F Y + Sbjct: 10 LLAPQYLNWLWQGFLLTLWISACTVVAATLLGFLLAAAR----DSELKALRWFAVGYSTL 65 Query: 65 FRGTPLLVQLFVIFYGL--------------PH----IGIVFD----SFVAIIISLTLNF 102 FR TPLL+QLF ++ PH IG+ F+A I LTL Sbjct: 66 FRNTPLLIQLFFWYFAASQFLPATWVPWLNTPHEITFIGLTLGWPSFEFLAGFIGLTLYS 125 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +A+I+E +RS I + KGQ A++A+GLT Q++RH++LPQ + + PL ++++I+K+ Sbjct: 126 TAFIAEELRSGISGVAKGQKYAAHALGLTGWQSMRHVVLPQALKIAMPPLLGQYMNIIKN 185 Query: 163 TSVASTITIPEIFQTAQRIVSTT 185 +S+A I + E+ ++++ + T Sbjct: 186 SSLAMAIGVAELSYASRQVETET 208 >gi|291616687|ref|YP_003519429.1| GltJ [Pantoea ananatis LMG 20103] gi|291151717|gb|ADD76301.1| GltJ [Pantoea ananatis LMG 20103] gi|327393113|dbj|BAK10535.1| glutamate/aspartate transport system permease protein GltJ [Pantoea ananatis AJ13355] Length = 246 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 105/180 (58%), Gaps = 14/180 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++C +++I+ +G F ++R + ++S I YV +FR PL+VQ F Sbjct: 25 LWSGFQVTIAVSCCAWIIAFCVGSFFGILRTV-PNRLLSTIGTCYVELFRNIPLIVQFFF 83 Query: 77 IFYGLPHI-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + P + G+ F S F++ ++ L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVAPELVGQDLGMWFKSELDPNLQFFISSVVCLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 >gi|187477189|ref|YP_785213.1| amino acid ABC transporter permease [Bordetella avium 197N] gi|115421775|emb|CAJ48286.1| amino acid ABC transporter, permease protein [Bordetella avium 197N] Length = 222 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 46/142 (32%), Positives = 83/142 (58%), Gaps = 1/142 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ FR P LV L ++++G P +GI D A+I++ LN ++Y +E+ R+ I ++PKG Sbjct: 65 YIDFFRAFPPLVLLILVYFGWPFLGIELDKLTAVIVAFVLNNASYYAEVFRAGIEAVPKG 124 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ + GL R Q + +++PQ + L I ++K T++AS + +PE+ + A+ Sbjct: 125 QMEAARSTGLGRGQALGFVVIPQAVRNVLPDLVGNSIEVVKLTTIASVVALPELLRAARD 184 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 + Y P + A +YL+L Sbjct: 185 AQALVYSPSPVVLA-ALMYLVL 205 >gi|152978298|ref|YP_001343927.1| arginine transporter permease subunit ArtQ [Actinobacillus succinogenes 130Z] gi|150840021|gb|ABR73992.1| polar amino acid ABC transporter, inner membrane subunit [Actinobacillus succinogenes 130Z] Length = 223 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 62/215 (28%), Positives = 116/215 (53%), Gaps = 8/215 (3%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F L+Y+A ++TL +A S ++ LI+ F ++ I + + + RG P + Sbjct: 4 DFLPLMYSAALITLALAVSSLIVGLILSMFFVMLETS-KFACIRKPVSVAITLLRGLPEI 62 Query: 72 VQLFVIFYGLPHI-----G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + + +I++G + G + F +F + +L+L F+AY S+ +R +I +I GQW++ Sbjct: 63 IVVLLIYFGSTEVVEKLTGEYVEFSAFSCGVAALSLIFAAYASQSLRGAIQAISLGQWES 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+GL+R T HIILPQ + LS++++ +LK T++ S I + +I + I + Sbjct: 123 GAALGLSRGYTFMHIILPQMWRHALPGLSNQWLVLLKDTALVSLIGVNDIMRQTDLINTN 182 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T+QP Y A +YL++T + ++E T+ Sbjct: 183 THQPFTWYGFAALIYLVITLISQVFIRRLEQRFTR 217 >gi|313668108|ref|YP_004048392.1| binding-protein-dependent transport systems hypothetical protein [Neisseria lactamica ST-640] gi|313005570|emb|CBN87006.1| putative binding-protein-dependent transport systems inner membrane protein [Neisseria lactamica 020-06] Length = 248 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 102/183 (55%), Gaps = 27/183 (14%) Query: 61 YVWIFRGTPLLVQLFV------IFYGLPHIGIV------------FDSFVAIIISLTLNF 102 YV +FRGTPL VQ+ + +F+ GI+ + +A ++L N Sbjct: 69 YVTLFRGTPLFVQIVIWAYVWFLFFVNSSDGILVSGEAAVELRRGYGPLIAGSLALIANS 128 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AYI EI R+ I SI KGQ +A+ ++G+T Q +R++ILPQ + PL+SEFI++LK Sbjct: 129 GAYICEIFRAGIQSIDKGQMEAARSLGMTYPQAMRYVILPQALRRMLPPLASEFITLLKD 188 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCE----LAFVYLILTSFCYIIQIKIESSVT 218 +S+ S I +PE+ Q+ ++ Y IY E +A +YL++T+F I +++E Sbjct: 189 SSLLSVIAVPEL-SYVQKTITGRYS---IYEEPLYTVALIYLLMTTFLGWIFLRLEKRYN 244 Query: 219 -QH 220 QH Sbjct: 245 PQH 247 >gi|294498829|ref|YP_003562529.1| sulfur-containing amino acid ABC transporter permease TcyM [Bacillus megaterium QM B1551] gi|295704151|ref|YP_003597226.1| sulfur-containing amino acid ABC transporter permease TcyM [Bacillus megaterium DSM 319] gi|294348766|gb|ADE69095.1| sulfur-containing amino acid ABC transporter, permease protein TcyM [Bacillus megaterium QM B1551] gi|294801810|gb|ADF38876.1| sulfur-containing amino acid ABC transporter, permease protein TcyM [Bacillus megaterium DSM 319] Length = 236 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 63/193 (32%), Positives = 104/193 (53%), Gaps = 14/193 (7%) Query: 42 IAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP--------HIGIVFDS--- 90 +A +RI S II+ I + YV FRGTP ++ + VI+ G P + G F++ Sbjct: 40 VAAVRIN-SVKIITPIANVYVSFFRGTPAILHIMVIYLGFPLFINKLSSYYGWGFNANSI 98 Query: 91 --FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 V ++I+L+ AY+SEIIRS ++++ KGQ +A+YAIG+ R Q+++ I+ PQ S Sbjct: 99 PIVVFVLIALSFTAGAYMSEIIRSGLLAVEKGQIEAAYAIGMNRFQSMKRIVFPQAFALS 158 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 L + FI L ++S+A ++ E+ A + S + L Y A +Y +LT Sbjct: 159 LPNLCNIFIGFLHTSSIAFIVSQKELNGAANIVASNNLKFLEAYIAAALIYWMLTMLIEG 218 Query: 209 IQIKIESSVTQHT 221 I +E +T + Sbjct: 219 ITALLERKLTVYN 231 >gi|229829573|ref|ZP_04455642.1| hypothetical protein GCWU000342_01670 [Shuttleworthia satelles DSM 14600] gi|229791562|gb|EEP27676.1| hypothetical protein GCWU000342_01670 [Shuttleworthia satelles DSM 14600] Length = 244 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 65/235 (27%), Positives = 120/235 (51%), Gaps = 26/235 (11%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI------------ 53 N I D+ Q L + + VTL I + ++ +++G +A +R + + Sbjct: 14 LNFINDNRWQSLVSGLGVTLQITVFAVIVGILLGALVATVRSTWDKSGEEMGRRKSPAYY 73 Query: 54 ----ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF----DSFVAIIISLTLNFSAY 105 ++I Y+ + RGTP++VQL + ++ I+F ++ I + LN +AY Sbjct: 74 LLKGFNVICKIYLTVIRGTPVVVQLMISYF------IIFATSKNAVAVAIFAFGLNSAAY 127 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 ++EIIR I+SI +GQ++A ++G QT+ +IILPQ L +EFI+++K TSV Sbjct: 128 VAEIIRGGIMSIDEGQFEAGRSLGFNYPQTMIYIILPQVFKAVLPALLNEFITLVKETSV 187 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 A + I ++ + I S TY + +A +YL++ + ++E + Q+ Sbjct: 188 AGYVGIMDLTKAGDVIRSRTYSAFMPLFAVAGIYLVIVIILETVFGRLERRLRQN 242 >gi|148985284|ref|ZP_01818507.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] gi|147922482|gb|EDK73601.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] Length = 226 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 104/194 (53%), Gaps = 1/194 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A +TL IA + S ++G +++IR + +++ + Y+ + R T Sbjct: 5 IVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIR-HYRIPVLAQVATAYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+ LF +++GLP IGIV S V + L +Y++E RS + +I + Q + AI Sbjct: 64 PLLIHLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q R+++LPQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183 Query: 189 LIIYCELAFVYLIL 202 I L YLI+ Sbjct: 184 DIALAMLVVAYLIM 197 >gi|148260140|ref|YP_001234267.1| polar amino acid ABC transporter, inner membrane subunit [Acidiphilium cryptum JF-5] gi|326402908|ref|YP_004282989.1| putative amino acid ABC transporter permease [Acidiphilium multivorum AIU301] gi|146401821|gb|ABQ30348.1| amino acid ABC transporter membrane protein, PAAT family [Acidiphilium cryptum JF-5] gi|325049769|dbj|BAJ80107.1| putative amino acid ABC transporter permease protein [Acidiphilium multivorum AIU301] Length = 250 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 112/210 (53%), Gaps = 13/210 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +T+ I+ I L IG A+ R ++ Y+++ RGTPLLVQ+ I+ GL Sbjct: 25 LTIMISVGGQAIGLAIGLPAALAR-RSKMGVLRWPARAYIFLMRGTPLLVQIVFIYTGLA 83 Query: 83 HIGIV------------FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 GI+ + A I++L LN AY++EI R+ I ++ +GQ +A+ ++G+ Sbjct: 84 AAGILRFHDIHLGGLTLAGNVQAGILALGLNEGAYMAEIFRAGIDAVDRGQTEAAKSLGM 143 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 Q +R+++LPQ + +P+ ++F +LK++++ S I + E+ + I S T++ Sbjct: 144 VPWQILRYVVLPQALRVVLLPIGNQFNIMLKNSTLVSVIGVSEMLLVTETINSATFRTFE 203 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +Y LA +L LT+ + ++E + + Sbjct: 204 LYSVLALYFLALTTIWGAVMAQVERRMDRQ 233 >gi|254229408|ref|ZP_04922824.1| ABC-type arginine/histidine transport system, permease component [Vibrio sp. Ex25] gi|262396868|ref|YP_003288721.1| arginine ABC transporter permease protein ArtM [Vibrio sp. Ex25] gi|151938099|gb|EDN56941.1| ABC-type arginine/histidine transport system, permease component [Vibrio sp. Ex25] gi|262340462|gb|ACY54256.1| arginine ABC transporter permease protein ArtM [Vibrio sp. Ex25] Length = 222 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 91/163 (55%), Gaps = 10/163 (6%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSI 114 +F GTPLLVQ+F+++YG +V +S + +++L LN +AY +++ + + Sbjct: 55 LFTGTPLLVQIFLVYYGPGQFDVVRESVFWTWLSQPWFCAMLALALNTAAYSTQLFKGAF 114 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IP GQW A A+G+ + T++ ++LP I + S+E I + K TS+ASTITI ++ Sbjct: 115 NAIPSGQWQACRALGMNKTATLK-VLLPYAIRRAVPAYSNEVILVFKGTSLASTITIMDL 173 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 AQRI + TY L ++ YL + +I ++E Sbjct: 174 MGYAQRINAQTYDTLTVFGIAGAFYLTVNGVLTLIFRQVEKKA 216 >gi|331016474|gb|EGH96530.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 219 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 112/208 (53%), Gaps = 6/208 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M L+ S PQL+ A TL I+ ++ V S + G V+R + + + Sbjct: 1 MASSGLELLWVSAPQLITGA-GRTLGISLLAIVFSSVGGLCYGVLRSL-GKRWLEIPLRI 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ +FR P+LV L++ F+GLP G+ +F ++ L+L ++ + E++R + SIP+ Sbjct: 59 YLELFRAIPVLVWLYLFFFGLPIFFGLSIPAFWCAVLVLSLWGASEVGEVVRGGLRSIPR 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A AIGL Q ++LPQ + P+ + + ++K++S+A I + +I + Q Sbjct: 119 GQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVIDITKVGQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCY 207 +I+ TY+ ++IY F++L CY Sbjct: 179 QIIERTYESVLIY---GFLFLFFFIVCY 203 >gi|323698677|ref|ZP_08110589.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323458609|gb|EGB14474.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 222 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 78/132 (59%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV R TP LVQL+ IF+GLP +G+ + A +++ LN AY +EIIR+ + SIP+G Sbjct: 60 YVECVRNTPFLVQLYFIFFGLPALGVKLSGWEASFLAMALNLGAYSTEIIRAGVQSIPRG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++ L+R QT R +IL + L S+ I ++ +SV S + E+ TA Sbjct: 120 QVEAAESLALSRWQTFRFVILRPALKNVWPALCSQIIIVMLGSSVCSQVAAQELTYTANL 179 Query: 181 IVSTTYQPLIIY 192 I S T++ IY Sbjct: 180 IQSRTFRAFEIY 191 >gi|254250639|ref|ZP_04943958.1| transport system membrane protein [Burkholderia cenocepacia PC184] gi|124879773|gb|EAY67129.1| transport system membrane protein [Burkholderia cenocepacia PC184] Length = 220 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 54/160 (33%), Positives = 85/160 (53%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV +FRGTP LVQLF+++YG P G+ FD A ++ L L AY +E RS ++P+G Sbjct: 59 YVELFRGTPFLVQLFLLYYGGPAFGLTFDPLTAGVVGLALYAGAYFTEAFRSGFSAVPQG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ +GL+R QT + LPQ + L++ I + K T+V S +T+PE+ Sbjct: 119 HVEAASCLGLSRWQTTFRVQLPQMMVLILPALTNLAIVLSKETAVLSIVTVPELTFVLTG 178 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 I S ++ + L+ YL+L +E V + Sbjct: 179 IGSASFAFVETLLALSVCYLLLVEMATWAGTAVERRVARR 218 >gi|91789328|ref|YP_550280.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91698553|gb|ABE45382.1| amino acid ABC transporter membrane protein 1, PAAT family [Polaromonas sp. JS666] Length = 220 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 2/195 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ +P LL ++ T+ + IS ++ ++ G A +R + + YV + R T Sbjct: 10 VLSQWP-LLAKGVLWTVGLTVISAMMGVVAGVAFAWVR-SHGAPWLKWGVGTYVELIRNT 67 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P +VQLF +F+GLP GI VA II++ +N SAY +EIIR+ I + PKGQ +A+ ++ Sbjct: 68 PFIVQLFFVFFGLPAAGIKLSPEVASIIAMVINLSAYATEIIRAGIDATPKGQIEAAMSL 127 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 L R QT ++LP + L S+ I ++ ++V I+ E+ A I S ++ Sbjct: 128 ALNRMQTFVRVVLPPALRKVWPSLVSQIIIVMLGSAVCGQISTEELSYAANLIQSRNFRA 187 Query: 189 LIIYCELAFVYLILT 203 Y VYL L Sbjct: 188 FEAYIVATLVYLTLA 202 >gi|330988581|gb|EGH86684.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] Length = 277 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 124/216 (57%), Gaps = 10/216 (4%) Query: 8 LIIDSFPQLL---------YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 +I+D P L+ +TL ++ S V+S+++GF A+ R+ S + I Sbjct: 52 IILDKLPNLIGLHLAPNGFLQGAALTLFVSLCSIVVSVLLGFVTALARLS-SSAVAFGIA 110 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 FY FRGTPLL+Q+ +I+ GLP +GIV + A +I+L+LN+ AY+SEI R+ II + Sbjct: 111 SFYASFFRGTPLLIQILLIYLGLPQLGIVPGAITAGVIALSLNYGAYLSEIFRAGIIGVA 170 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +A+ A+ L Q + LPQ + T P +++FIS+LK +S+ S + + E+ A Sbjct: 171 AGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLA 230 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Q ++Y+ + + A +Y I++ ++Q ++E Sbjct: 231 QSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266 >gi|320154861|ref|YP_004187240.1| putative amino acid ABC transporter permease [Vibrio vulnificus MO6-24/O] gi|319930173|gb|ADV85037.1| putative amino acid ABC transporter permease protein [Vibrio vulnificus MO6-24/O] Length = 238 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 108/199 (54%), Gaps = 9/199 (4%) Query: 2 KYEWFNLIID-------SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII 54 Y+W ++D + + L A T+ ++ +S + ++ +G +A+ + ++ Sbjct: 11 DYQWGWYVLDPTTEQGLTNVKFLIAGFADTISVSLLSMLFAMTLGLMVALPALSPRKSLQ 70 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 L YV + R P+LV L ++YGLP + + D + A II+LT+ SA+++E+ R Sbjct: 71 RL-NRIYVEVIRAIPVLVLLLWVYYGLPTLLDVSLDHYWAGIIALTIAESAFMAEVFRGG 129 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SI +GQ +A+ ++GL Q +R +ILPQ L ++F+ ILK +S+ S I + + Sbjct: 130 IQSIGRGQHEAAKSLGLNYWQKMRLVILPQAFRQMLPALGNQFVYILKMSSLVSVIGLSD 189 Query: 174 IFQTAQRIVSTTYQPLIIY 192 + + A +V Y PL IY Sbjct: 190 LTRRANELVVNEYLPLEIY 208 >gi|213970377|ref|ZP_03398506.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301381160|ref|ZP_07229578.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302063126|ref|ZP_07254667.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302132573|ref|ZP_07258563.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924848|gb|EEB58414.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 219 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 112/208 (53%), Gaps = 6/208 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M L+ S PQL+ A TL I+ ++ V S + G V+R + + + Sbjct: 1 MASSGLELLWVSAPQLITGA-GRTLGISLLAIVFSSVGGLCYGVLRSL-GKRWLEIPLRI 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ +FR P+LV L++ F+GLP G+ +F ++ L+L ++ + E++R + SIP+ Sbjct: 59 YLELFRAIPVLVWLYLFFFGLPIFFGLSIPAFWCAVLVLSLWGASEVGEVVRGGLRSIPR 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A AIGL Q ++LPQ + P+ + + ++K++S+A I + +I + Q Sbjct: 119 GQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVIDITKVGQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCY 207 +I+ TY+ ++IY F++L CY Sbjct: 179 QIIERTYESVLIY---GFLFLFFFIVCY 203 >gi|315633805|ref|ZP_07889094.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Aggregatibacter segnis ATCC 33393] gi|315477055|gb|EFU67798.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Aggregatibacter segnis ATCC 33393] Length = 226 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 103/177 (58%), Gaps = 10/177 (5%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS---------LTL 100 + ++ ++ Y+ +F GTPLLVQ F+I+ G + DS + ++ S L L Sbjct: 41 GNKVVKSAVNLYLTLFTGTPLLVQFFLIYAGPGQFQWIVDSPLWLLFSNAWFCAALALAL 100 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N +AY +++ ++ +IPKGQW++ A+GL+R QT++ I+LP + + S+E I + Sbjct: 101 NSAAYSTQLFHGAVKAIPKGQWESCEALGLSRLQTLK-ILLPYALKRALPSYSNEIILVF 159 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 K T++ASTITI +I A+++ T Y L IY +YL++T ++ K+E+ V Sbjct: 160 KGTALASTITIMDIMGYARQLYGTEYDALTIYGIAGGIYLVITGIATLLLRKLENKV 216 >gi|293395144|ref|ZP_06639430.1| histidine ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] gi|291422321|gb|EFE95564.1| histidine ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] Length = 235 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 115/217 (52%), Gaps = 15/217 (6%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + VTL + S V+ ++ +AV R+ S + + Y ++FRGTPL VQL V Sbjct: 20 FTGVAVTLWLLIASVVMGGLLAIPMAVARVS-SLRWLRFPVWLYTYVFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + +V ++F I++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYSLEMVRGTELLNAFFRSGLNCTILALTLNTCAYTTEIFAGAIRSVPHGEIEAANA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G +R + R IILP + ++ S+E I +L ST++A T T+P++ + A+ I + TYQ Sbjct: 139 YGFSRFKMYRCIILPSALRSALPAYSNEVILMLHSTALAFTATVPDLLKVARDINAATYQ 198 Query: 188 PLIIYCELAFVYL----ILTSFCYIIQIKIESSVTQH 220 P + A +YL L S + + + VTQ Sbjct: 199 PFYAFGIAAVLYLAISYALISLFRLAEKRWMGHVTQR 235 >gi|296533473|ref|ZP_06896052.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296266199|gb|EFH12245.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 226 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 84/143 (58%), Gaps = 1/143 (0%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 F V +FR P LV + ++F+GLP +G+ F A +SLTL A+ EI + I ++PK Sbjct: 66 FTVDLFRALPPLVIIVLLFFGLPAMGLGLSGFAATWLSLTLVLMAFSEEIYWAGITAVPK 125 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A+ + GL+ T+R ++LPQ + + PL++ I+I K T++ S + + EI AQ Sbjct: 126 GQWEAARSTGLSFLATLRLVVLPQALRITIPPLTNRTIAITKGTALGSVVGVSEILGAAQ 185 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 +S + P + A YLIL Sbjct: 186 SAMSFSANPTPLTMG-AIAYLIL 207 >gi|326793482|ref|YP_004311302.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas mediterranea MMB-1] gi|326544246|gb|ADZ89466.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas mediterranea MMB-1] Length = 220 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 57/166 (34%), Positives = 95/166 (57%), Gaps = 1/166 (0%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS 97 +G AV+R + + ++ YV + R TP +VQLF IF+GLP IG++ + A +I+ Sbjct: 35 LGTLCAVLRQYGGASPRRIVAS-YVELIRNTPFIVQLFFIFFGLPSIGVMLTPWQASVIA 93 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 LT+N AY +EIIR+ + SIPKGQ +A+ +G+T +QT+ +I L+S+ I Sbjct: 94 LTINLGAYSTEIIRAGLGSIPKGQVEAAKVLGMTFRQTLTRVIFVPAFEKIYPALTSQCI 153 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ ++V S I++ E+ A + S ++ Y A +YL L Sbjct: 154 IVMLGSAVISQISVEELTYAANLVQSRNFRAFESYLVTALLYLGLA 199 >gi|313123999|ref|YP_004034258.1| ABC amino acid transporter permease/periplasmic component [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280562|gb|ADQ61281.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 500 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 97/167 (58%), Gaps = 1/167 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I S I L++G A++R+ + ++ I Y+ RGTP +VQ+ +++G+ Sbjct: 301 TMIITICSITIGLVLGVIFALMRLS-KNKLLHAIAVCYIEFLRGTPQMVQIMFVYFGVGM 359 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + + A II++ LN AY++E IRS I S+ KGQ +A+ ++GL++ +T R+++ PQ Sbjct: 360 LIKNMPALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLSQAKTYRYVVFPQ 419 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + L +EFI++ K +S+ S I + E+ + + TY+ ++ Sbjct: 420 ALKNIWPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVM 466 >gi|209547158|ref|YP_002279076.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538402|gb|ACI58336.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 290 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 69/223 (30%), Positives = 119/223 (53%), Gaps = 22/223 (9%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +++TL + + V + +G +AV+ ++ ++ I +VW FRG PL+VQ+F+ F Sbjct: 66 GVLLTLELTAGAMVFGISLGCLLAVMATS-TNFVLKAIAAGFVWWFRGVPLIVQIFLWFN 124 Query: 80 --------GLPHIGIVFDSFV----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 G+ H I + V A ++L L+ +A +SEIIRS +++I +GQ +A+ A Sbjct: 125 IALFIPQVGVGHYSISINDLVTPALAGFLALGLHEAANMSEIIRSGLLAIDRGQREAATA 184 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL +QT R +ILPQ P ++ I +LK++++ S I + ++ AQ I + + Sbjct: 185 LGLKSRQTFRTVILPQAARLIIPPTGNQAIGMLKASAIVSVIGMQDLLTQAQVIYARNF- 243 Query: 188 PLIIYCELAFV----YLILTSFCYIIQIKIESSVTQHTYSVDK 226 + EL FV YL +T+ I Q +E S+ Q Y K Sbjct: 244 ---LVIELLFVASIWYLAITTVASIGQHYLEKSL-QPKYRNGK 282 >gi|116252501|ref|YP_768339.1| transmembrane permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115257149|emb|CAK08244.1| putative transmembrane permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 276 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 119/217 (54%), Gaps = 13/217 (5%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P+ L+ + +TL + IS + I+ +A+ R+ ++ +++ + + Y++ FRGTPLL Q Sbjct: 60 PRYLHG-LWITLSLVFISVICGAILSLPLAMARMS-NNRVLNALAYGYIYFFRGTPLLAQ 117 Query: 74 LFVIFYGL----PH---IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 LF+++YGL P +GI + +++ + ++T+N +AY +EI+R +I S+P GQ + Sbjct: 118 LFLVYYGLGVFRPQLEAVGIWWFFREAWYCGLFAMTINTAAYQAEILRGAIESVPHGQRE 177 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+G+ R IILPQ + P +E I ++K ++V + IT+ ++ + S Sbjct: 178 AAAALGIHNSIAFRKIILPQAFIVALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFS 237 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T+ Y A YL + + E +T+H Sbjct: 238 RTFD-YQTYLWAAIFYLTIVEALRHLWAWFERRLTRH 273 >gi|317048959|ref|YP_004116607.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316950576|gb|ADU70051.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 238 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 107/196 (54%), Gaps = 11/196 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + IS I + +A+ R+ + +S + + ++FRGTPL VQL V Sbjct: 20 FTGVAITLWLLIISVAIGGCLAVLLAIARVS-PNRFVSTPVWLFTYVFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + +V S +++ TLN AY +EI +I ++P G+ +A+ A Sbjct: 79 YSGMYTLEVVKGSELLNAFFRSGLNCTLLAFTLNTCAYTTEIFAGAIRAVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + T+ S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSTFKLYRCIILPSALRTALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILT 203 P + + A +YLI++ Sbjct: 199 PFVAFGIAAVLYLIIS 214 >gi|238922609|ref|YP_002936122.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Eubacterium rectale ATCC 33656] gi|238874281|gb|ACR73988.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Eubacterium rectale ATCC 33656] Length = 252 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 55/220 (25%), Positives = 117/220 (53%), Gaps = 21/220 (9%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR-IFFSDT---------- 52 EW + + + +TL I+ + ++ ++G+ + ++ + +D Sbjct: 11 EWMVFLAQKYSSMFIKGTWLTLYISVVGTLLGFVLGYIVGIVNDVKLNDGDNIVKKVLIR 70 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS----FVAIIISLTLNFSAYISE 108 I+ +I YV +FR TP++VQ +++YG+ +G +++ F I++++ LN AY+ E Sbjct: 71 IVKVIFTVYVEVFRDTPMIVQAMIVYYGIRQMG--YENLTPVFAGILVTV-LNTGAYMGE 127 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 +R+ I SI GQ + ++A+G++ +T+ +++LPQ +++ F+ LK TSV + Sbjct: 128 TVRAGIGSIDMGQREGAWAMGMSPFKTMLYVVLPQAFKNIIPEMANTFLLNLKMTSVLNV 187 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 I + E+F A+ + Y+ Y +A +Y +L C++ Sbjct: 188 IAVQELFMAAKTVGGNYYKYFESYLVIAVIYFVL---CFV 224 >gi|238795092|ref|ZP_04638684.1| Histidine transport system permease protein hisM [Yersinia intermedia ATCC 29909] gi|238725587|gb|EEQ17149.1| Histidine transport system permease protein hisM [Yersinia intermedia ATCC 29909] Length = 216 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 108/193 (55%), Gaps = 11/193 (5%) Query: 21 IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG 80 + VTL + S V+ ++ +AV R+ I L + + +IFRGTPL VQL V + G Sbjct: 1 MAVTLWLLISSVVMGGLLAIPLAVARVA-ERRWIRLPVWIFTYIFRGTPLYVQLLVFYSG 59 Query: 81 LPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + + IV ++F I++LTLN AY +EI +I S+P G+ +A+ A G Sbjct: 60 MYSLEIVRGNDLLNAFFRSGLNCTILALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGF 119 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 +R + R IILP + + S+E I +L ST++A T T+P+I + A+ I + TYQP Sbjct: 120 SRFKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDILKIARDINAATYQPFY 179 Query: 191 IYCELAFVYLILT 203 + A +YLI++ Sbjct: 180 AFGIAAVLYLIIS 192 >gi|308234441|ref|ZP_07665178.1| amino acid ABC transporter permease protein [Atopobium vaginae DSM 15829] gi|328944287|ref|ZP_08241751.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Atopobium vaginae DSM 15829] gi|327491206|gb|EGF22981.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Atopobium vaginae DSM 15829] Length = 585 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 111/211 (52%), Gaps = 15/211 (7%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-------IRIFFSDTIISL 56 E +N D F + + ++++ I F+I L+I + + IR ++ L Sbjct: 353 EIWNTYHDQFIRGTFYTVIISFISTFIGFLIGLLIAIYQTIQVSKHHRIRYMLYKSVAVL 412 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS----LTLNFSAYISEIIRS 112 I Y+ +FRGTP++VQ +IFYG ++F+ ++ + S +++N AY+SE +R Sbjct: 413 I-RIYIEVFRGTPMMVQAMLIFYGSK---LLFNLDLSPLTSAFFIVSVNSGAYLSETVRG 468 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I+ + KGQ + ++A+GL T+ HIILPQ + + + +E +K TSV + I + Sbjct: 469 GILGVSKGQLEGAHALGLNHWDTMVHIILPQAVISILPSVGNELNMNIKDTSVLNVIAVS 528 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+F + I TTYQ Y + +Y LT Sbjct: 529 ELFFITKSIAGTTYQTFQTYLIASVIYFALT 559 >gi|222102792|ref|YP_002539831.1| ABC transporter membrane spanning protein (nopaline) [Agrobacterium vitis S4] gi|221739393|gb|ACM40126.1| ABC transporter membrane spanning protein (nopaline) [Agrobacterium vitis S4] Length = 226 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 70/204 (34%), Positives = 109/204 (53%), Gaps = 12/204 (5%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+I + P LL A TL IA L G +A+ R + ++ FY IFR Sbjct: 4 NIITYAVPFLLTGA-KTTLLIAVFGIGFGLPFGVLLALGR-GSHNHVLRRTCDFYCAIFR 61 Query: 67 GTPLLVQLFVIFYGLPHIG----------IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 GTP+LVQ+FVI+YGL I ++ + A I+++ LN AY +EI RS+++S Sbjct: 62 GTPMLVQIFVIYYGLAQISFVRQNPILWWMIGNGLHAAILAVILNTCAYTAEIFRSALLS 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+G +A+ A G++ + P + + SSE I+K +S+ASTIT+ EI Sbjct: 122 LPRGLIEAAEACGMSGWHIFIRVKFPLALRQALPAYSSEVAIIVKESSLASTITVLEITG 181 Query: 177 TAQRIVSTTYQPLIIYCELAFVYL 200 A+R++S T+ + I+ A YL Sbjct: 182 YAKRLMSETFAIMDIFIITAAFYL 205 >gi|28872358|ref|NP_794977.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28855613|gb|AAO58672.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] gi|330965546|gb|EGH65806.1| amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] gi|331017860|gb|EGH97916.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 221 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 108/204 (52%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F ++ + LL A+ TL + I ++ + +G AV+R + + I Sbjct: 1 MAYHFDFTPVLQNIDVLLRGALF-TLELTAIGTLLGVSLGIVGAVVRAWKIQPFAT-IFA 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TP LVQLF IF+GLP +G+ + A ++++ +N AY +EIIR+ I +IPK Sbjct: 59 IYVELIRNTPFLVQLFFIFFGLPSLGVQISEWQAAVLAMVINLGAYSTEIIRAGIQAIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +AS A+ + R + R+++L + LSS+ I ++ ++V S I E+ A Sbjct: 119 GQLEASAALAMNRYEAFRYVVLVPALGKVWPALSSQIIIVMLGSAVCSQIATEELSFFAN 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I S ++ Y +YL + Sbjct: 179 FIQSRNFRSFETYIVTTLIYLAMA 202 >gi|70729566|ref|YP_259304.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68343865|gb|AAY91471.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 239 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 117/203 (57%), Gaps = 18/203 (8%) Query: 16 LLYAAIV-VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 LL A+V + L +AC+ I L +G +A+ + + F +FRG P L+ L Sbjct: 19 LLAGALVTIALALACVP--IGLPLGLAVALAARSKNRWARAWATTFST-VFRGLPELLTL 75 Query: 75 FVIFYG--------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +I+YG L +G + ++FVA +I+ +L F+A+ SEI ++ ++PKGQ+ Sbjct: 76 LIIYYGCQIAAQKILGALGYPGEVAINTFVAAMIAFSLVFAAFSSEIWLAAFKTLPKGQY 135 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVP-LSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ A+ L+R+ T ++LPQ +T A+P LS+ ++S+LK TS+ STI++ ++ + Sbjct: 136 EAARALSLSRRTTFNRVLLPQ-LTRIALPGLSNNWLSLLKDTSLVSTISLVDLMRQTNLA 194 Query: 182 VSTTYQPLIIYCELAFVYLILTS 204 VS T +P++ Y F YL ++ Sbjct: 195 VSVTKEPMLFYSVACFGYLFFSA 217 >gi|331701148|ref|YP_004398107.1| polar amino acid ABC transporter inner membrane subunit [Lactobacillus buchneri NRRL B-30929] gi|329128491|gb|AEB73044.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus buchneri NRRL B-30929] Length = 715 Score = 95.5 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 105/193 (54%), Gaps = 10/193 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLIMHFYVWIFRGTPLLV 72 L++ + TL + +S + I G + ++ + F T +LI ++FRG PLLV Sbjct: 513 LWSGLQETLWLTVVSIFFATIFGVLVGLMGVVPNKFSQGTSTTLI-----YLFRGMPLLV 567 Query: 73 QLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 I+ G+P + G +FVA +++LT N AYI+ ++ I ++ GQ +AS ++GL Sbjct: 568 LALFIYTGIPSLTGQKIPAFVAGVVTLTFNEGAYIAAFVKGGIQAVDPGQMEASRSLGLP 627 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 + +R +ILPQ I ++FI LK TS+ S I + E+ QT + I++ + + Sbjct: 628 FGKAMRKVILPQGIRIMVPSFINQFIITLKDTSILSIIGLLELTQTGKIIIARNLEGFKV 687 Query: 192 YCELAFVYLILTS 204 + +A +YLI+ + Sbjct: 688 WTIVAAIYLIIIT 700 >gi|300812584|ref|ZP_07093001.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496457|gb|EFK31562.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 500 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 97/167 (58%), Gaps = 1/167 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I S I L++G A++R+ + ++ I Y+ RGTP +VQ+ +++G+ Sbjct: 301 TMIITICSITIGLVLGVIFALMRLS-KNKLLHAIAVCYIEFLRGTPQMVQIMFVYFGVGM 359 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + + A II++ LN AY++E IRS I S+ KGQ +A+ ++GL++ +T R+++ PQ Sbjct: 360 LIKNMPALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLSQSKTYRYVVFPQ 419 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + L +EFI++ K +S+ S I + E+ + + TY+ ++ Sbjct: 420 ALKNIWPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVM 466 >gi|313890243|ref|ZP_07823877.1| ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] gi|313121348|gb|EFR44453.1| ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] Length = 234 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 61/171 (35%), Positives = 102/171 (59%), Gaps = 12/171 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 YV +++ TPLLVQL ++YGL I I+F SF I+ + + AYI+E+IRS I ++ Sbjct: 69 YVELYQNTPLLVQLVFVYYGLAIISRGHIMFSSFFTAILCVGVYHGAYIAEVIRSGIEAV 128 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKGQ +AS + G T +QT+ I+LPQ + T P++++ ++++K+TS+ + I+ +I T Sbjct: 129 PKGQIEASLSQGFTYEQTMSLIVLPQAVRTILPPMTNQVVNLIKNTSIVAIISGADIMFT 188 Query: 178 AQRIV--STTYQPLIIYCELAFVYLILTSFCYIIQ--IKIESSVTQHTYSV 224 A+ ST Y P + A +Y I+ C+ + + + + TYSV Sbjct: 189 AKAWAYESTNYVP--AFAGAAILYFIM---CFPLANWARRKEEANKKTYSV 234 >gi|310641777|ref|YP_003946535.1| sulfur-containing amino acid abc transporter, permease protein tcyl [Paenibacillus polymyxa SC2] gi|309246727|gb|ADO56294.1| Sulfur-containing amino acid ABC transporter, permease protein TcyL [Paenibacillus polymyxa SC2] Length = 259 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 99/175 (56%), Gaps = 9/175 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 YV FRGTP+L+QLF+++YGLP + +D + + LN A+ISEIIRS Sbjct: 60 YVSFFRGTPILIQLFLVYYGLPELLKLVDINSSRWDVLWFAVATYALNSGAFISEIIRSG 119 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + ++ +GQ +A+ ++G++ QT IILPQ + S+ I LK TS+A TI E Sbjct: 120 VGAVDRGQIEAAQSVGMSGYQTFTRIILPQALAVVVPVFSNLVIGNLKDTSLAFTIGAME 179 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY--SVDK 226 + +Q + S T + Y L+F+YL+++ + +E+++ +H + SV K Sbjct: 180 MTGKSQTLGSATQHFVETYIALSFIYLVISLIVQKLFKVLENTLLRHEHRDSVQK 234 >gi|328881416|emb|CCA54655.1| ABC transporter permease [Streptomyces venezuelae ATCC 10712] Length = 282 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 112/216 (51%), Gaps = 21/216 (9%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL + + + +G +AV+R+ ++ ++ + YVW FR TP+LVQL F Sbjct: 70 GLGLTLWLTALVMALGFALGTLLAVLRLS-ANPVLRAVSWGYVWFFRSTPILVQLLFWF- 127 Query: 80 GLPHIGIVFDSFVAI------------IISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 +IG ++ + + +I LTL+ +AY +E++R I+S+ +GQ +A+ + Sbjct: 128 ---NIGALYPQILGVNTVNLLGPVSVAVIGLTLHEAAYAAEVVRGGILSVDRGQIEAAQS 184 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL R + + I+LPQ + P + I LK TS+ S I + ++ + Q + TY+ Sbjct: 185 LGLGRWRRLSRIVLPQAMRAIVPPAGNMLIGTLKGTSIVSVIAVQDLLYSTQLVYHRTYE 244 Query: 188 --PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 PL++ L Y+ +TS + Q +E + T Sbjct: 245 IIPLLLVATL--WYVAVTSVLSLGQYYVERHYARGT 278 >gi|163868115|ref|YP_001609319.1| ABC transporter, permease protein [Bartonella tribocorum CIP 105476] gi|161017766|emb|CAK01324.1| ABC transporter, permease protein [Bartonella tribocorum CIP 105476] Length = 240 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 102/179 (56%), Gaps = 13/179 (7%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP----------HIGIVF--DSFVAIIISLTLNFSA 104 I H + +FRG P L+ LF+++YGL ++ ++F ++FVA +++L++ F+A Sbjct: 58 IAHLFSTVFRGLPELLTLFLVYYGLQSLIQNIFDYFNLEVMFSINAFVAGVLALSMVFAA 117 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 + E+ + KGQ++A+ A+GL+R T I+ PQ I + LS+ ++++LK TS Sbjct: 118 FSCEVWLGAFNIFDKGQYEAAKALGLSRSTTFFRIVFPQLIRNALPGLSNNWLTLLKDTS 177 Query: 165 VASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + STI + ++ + V+ T +P++ Y +YL+ ++F I +E + TQ Y Sbjct: 178 LVSTIALVDLMRQTNLAVAATNKPMLFYLVACLLYLLFSAFFAAILRHLE-TYTQRGYK 235 >gi|323528627|ref|YP_004230779.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Burkholderia sp. CCGE1001] gi|323385629|gb|ADX57719.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Burkholderia sp. CCGE1001] Length = 219 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 108/200 (54%), Gaps = 3/200 (1%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY-- 79 +VT+ IA + V+++++ F +A + + + YV IFRGT LLVQLF F+ Sbjct: 13 LVTIEIAACATVLAIVMAF-VATAAKLAPWAPLRWLGNAYVEIFRGTSLLVQLFWFFFVL 71 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 LP I F I+ L L++ AY SEI+R ++ S+P GQ++A+ A+ L+ +R I Sbjct: 72 PLPPFRIEMTPFTVAIVGLGLHYGAYGSEILRGALRSVPGGQFEAALALNLSPLTRMRRI 131 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + + P ++ I +LK TS+ S IT+ ++ A+++ T++ I+ +Y Sbjct: 132 VLPQAMINALPPATNLMIELLKGTSLVSLITLSDLTFRARQLDEATFRTAEIFMLTLVIY 191 Query: 200 LILTSFCYIIQIKIESSVTQ 219 +L + E V+ Sbjct: 192 FVLAQVLVAVMRHFERRVSH 211 >gi|325685987|gb|EGD28048.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 500 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 97/167 (58%), Gaps = 1/167 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I S I L++G A++R+ + ++ I Y+ RGTP +VQ+ +++G+ Sbjct: 301 TMIITICSITIGLVLGVIFALMRLS-KNKLLHAIAVCYIEFLRGTPQMVQIMFVYFGVGM 359 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + + A II++ LN AY++E IRS I S+ KGQ +A+ ++GL++ +T R+++ PQ Sbjct: 360 LIKNMPALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLSQAKTYRYVVFPQ 419 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + L +EFI++ K +S+ S I + E+ + + TY+ ++ Sbjct: 420 ALKNIWPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVM 466 >gi|322806285|emb|CBZ03853.1| amino acid ABC transporter, amino acid-binding/permease protein [Clostridium botulinum H04402 065] Length = 162 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 50/142 (35%), Positives = 83/142 (58%), Gaps = 10/142 (7%) Query: 72 VQLFVIFYGLPHIGIVFD----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 +QL++I+YGLP IGI F F A I++L++N AY++EIIR+ I ++ KGQ Sbjct: 1 MQLYIIYYGLPTIGIKFPEVPILGSNFPDFFAGILALSINSGAYVAEIIRAGIQAVDKGQ 60 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++G++ +R++I+PQ L +EFI+I+K +S+ S I I E+ A + Sbjct: 61 MEAARSLGMSESMAMRNVIIPQAFKNILPALGNEFITIIKESSIVSIIGIHELMYNADTV 120 Query: 182 VSTTYQPLIIYCELAFVYLILT 203 ++P A +Y ILT Sbjct: 121 RGNIFRPFEPLLVAALMYFILT 142 >gi|320011626|gb|ADW06476.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces flavogriseus ATCC 33331] Length = 288 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 108/204 (52%), Gaps = 21/204 (10%) Query: 32 FVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF 91 V+ +G +AV+R+ + ++ + Y+W+FR TP+LVQL F +IG ++ Sbjct: 88 MVLGFALGTLLAVLRLS-GNRVLQAVSWGYIWLFRSTPILVQLLFWF----NIGALYPQI 142 Query: 92 VAI------------IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + + +I LTL+ +AY +E++R I+S+ +GQ +A+ ++GL + +R I Sbjct: 143 LGVSTVNLLGPVTVAVIGLTLHEAAYAAEVVRGGILSVERGQLEAAQSLGLGPWRRLRRI 202 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAF 197 +LPQ + + P + I LK TS+ S I + ++ + Q + TY+ PL++ L Sbjct: 203 VLPQAMRSIVPPAGNMLIGTLKGTSIVSIIAVQDLLYSVQLVYHRTYEVIPLLLVATL-- 260 Query: 198 VYLILTSFCYIIQIKIESSVTQHT 221 Y+ +TS + Q +E + T Sbjct: 261 WYVAVTSLLSLGQYYVERHYARGT 284 >gi|222148522|ref|YP_002549479.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221735508|gb|ACM36471.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 276 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 64/217 (29%), Positives = 113/217 (52%), Gaps = 13/217 (5%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P+ L + + TL I IS ++ IA R+ + + + + YV++FRGTPLL Q Sbjct: 60 PRFL-SGLGTTLSIVAISIAAGAVLSIPIAFGRMS-KNRLANAATYAYVYVFRGTPLLAQ 117 Query: 74 LFVIFYGLPHIGIVF----------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 +F+++YGL F D++ +++L+LN +AY +EI+R +I S+ +GQ + Sbjct: 118 VFLVYYGLGGFRAEFEAVGLWWFFRDAWYCGLLALSLNTAAYQAEILRGAIRSVGRGQHE 177 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 + ++GL R T IILPQ + + P +E I ++K +++ S IT+ ++ + S Sbjct: 178 GAASLGLPRTVTFWKIILPQALIVALRPYGNEIILMVKGSAILSIITVLDMMGETRYAFS 237 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T+ Y A YL + IE+ +T+H Sbjct: 238 RTFD-YQTYLWAAIFYLAIVEILRHGWAAIETRLTRH 273 >gi|86360916|ref|YP_472803.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86285018|gb|ABC94076.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 219 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 110/207 (53%), Gaps = 5/207 (2%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWIFRGTPLLVQ 73 L+ +VTL + I ++L++ F + R+ FF+ + + Y+ FRGT + VQ Sbjct: 10 LILQGALVTLELTVIGSALALVMAFLAGLGRLSRFFA---VRALATAYIEFFRGTSIFVQ 66 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LF +++ LP G+ A +++L LN AY +E++R ++ ++ + Q +A A+ L+R Sbjct: 67 LFWVYFVLPFAGLTLTPLQAGVLALGLNVGAYGAEVVRGAVKAVGREQSEACIALNLSRY 126 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q +RH+ILPQ + + I +LK T+V S I++ ++ AQ + + T L+ + Sbjct: 127 QRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTDMTFQAQVVRAQTGNTLVPFA 186 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQH 220 + +Y ++ S +E +T+ Sbjct: 187 AILILYFLMASAISAAMRLLERRMTRG 213 >gi|71737879|ref|YP_273293.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|257482032|ref|ZP_05636073.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|71558432|gb|AAZ37643.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320325714|gb|EFW81775.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320327367|gb|EFW83381.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330881565|gb|EGH15714.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] gi|330887840|gb|EGH20501.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] gi|331008890|gb|EGH88946.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 277 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 124/216 (57%), Gaps = 10/216 (4%) Query: 8 LIIDSFPQLL---------YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 +I+D P L+ +TL ++ S V+S+++GF A+ R+ S + I Sbjct: 52 IILDKLPNLIGLHLAPNGFLQGAALTLFVSLCSIVVSVLLGFVTALARLS-SSAVAFGIA 110 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 FY FRGTPLL+Q+ +I+ GLP +GIV + A +I+L+LN+ AY+SEI R+ II + Sbjct: 111 SFYASFFRGTPLLIQILLIYLGLPQLGIVPGAITAGVIALSLNYGAYLSEIFRAGIIGVA 170 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +A+ A+ L Q + LPQ + T P +++FIS+LK +S+ S + + E+ A Sbjct: 171 AGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLA 230 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Q ++Y+ + + A +Y I++ ++Q ++E Sbjct: 231 QSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266 >gi|46579164|ref|YP_009972.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|46448577|gb|AAS95231.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio vulgaris str. Hildenborough] gi|311233002|gb|ADP85856.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris RCH1] Length = 596 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 66/186 (35%), Positives = 106/186 (56%), Gaps = 5/186 (2%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI-MHFYVWIFRGTPLLVQLFVI 77 + +L +A I+ +S IG + + R SD I I Y+ + RG PL++ +F I Sbjct: 388 GGLAYSLLMAVIAISVSFFIGLVVGIGRT--SDNRICRIPCLLYIELIRGNPLIIVIFWI 445 Query: 78 FYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ +P + F+ F + I+LTL AY++EI+R+ I +IP GQ +A+Y+ GLT QT+ Sbjct: 446 YFFIPVLFNTFFNVFWSATIALTLFTGAYLAEIVRAGIQNIPAGQVEAAYSTGLTFVQTM 505 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST-TYQPLIIYCEL 195 R IILPQ + + +FI+I K TS+A + + E+ AQ I + P+ IY + Sbjct: 506 RRIILPQALKQMIPAIVGQFIAIFKDTSLAFVLGVLELTFVAQGINNRLMVYPMEIYGTV 565 Query: 196 AFVYLI 201 AF+Y I Sbjct: 566 AFLYFI 571 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/178 (33%), Positives = 100/178 (56%), Gaps = 12/178 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRI-FFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + VT+ I+ IS ++L +G + + R+ F+ + L V FR TPLLVQLF + Sbjct: 60 GLGVTVRISLISSALALGLGTVLGIARLSLFAP--LRLTATAVVEFFRNTPLLVQLFFWY 117 Query: 79 YGLPHI------GIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 + P I ++F F I L++ SA+++E+IR+ + SIPKG +A+Y+ G Sbjct: 118 FAFPAILPENIRELLFTGNFEFWCATIGLSVYTSAFMAEVIRAGLQSIPKGLLEAAYSSG 177 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 L Q +R IILP PL SEF++ +K++S+A + + E+ +Q++ S T++ Sbjct: 178 LNYVQVLRTIILPMAFRAIIPPLGSEFLNNMKNSSLAMVVGVAELTWQSQQVESLTFK 235 >gi|298485184|ref|ZP_07003278.1| amino acid ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160296|gb|EFI01323.1| amino acid ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 221 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 109/204 (53%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F ++ + LL A+ TL + I ++ + +G AV+R + + I Sbjct: 1 MAYHFDFTPVLQNIDVLLRGALF-TLELTAIGTLLGVSLGIVGAVVRAWKIQPFAT-IFA 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TP LVQLF IF+GLP +G+ + A ++++ +N AY +EI+R+ I +IPK Sbjct: 59 IYVELIRNTPFLVQLFFIFFGLPSLGVQITEWQAAVLAMVINLGAYSTEIVRAGIQAIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +AS A+ + R + R+++L ++ LSS+ I ++ ++V S I E+ A Sbjct: 119 GQLEASAALAMNRYEAFRYVVLVPALSKVWPALSSQIIIVMLGSAVCSQIATEELSFFAN 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I S ++ Y +YL + Sbjct: 179 FIQSRNFRSFETYIVTTLIYLAMA 202 >gi|139439229|ref|ZP_01772671.1| Hypothetical protein COLAER_01685 [Collinsella aerofaciens ATCC 25986] gi|133775253|gb|EBA39073.1| Hypothetical protein COLAER_01685 [Collinsella aerofaciens ATCC 25986] Length = 217 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 123/218 (56%), Gaps = 15/218 (6%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLV 72 Q+L +V+L + ++ + S+ +G +A +R+ I L I Y+ + RGTPL++ Sbjct: 8 QMLGQGFLVSLQLFVLTLLGSIPLGIPVAFMRM---SKIAPLRWIARIYISVMRGTPLML 64 Query: 73 QLFVIFYGLPH----IGIVFDS-FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 Q+F I++ P+ I + DS + A +++ +N++ Y +EI RS + SIP+GQ++A+ Sbjct: 65 QMFAIYFA-PYYVFGISLTPDSKWTACVVAFIINYAGYFAEIYRSGLQSIPRGQYEAAEV 123 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G +R QT +I++PQ + +E I+++K TS+A I + E+F TA+ +V++ Sbjct: 124 LGYSRVQTFLYIVMPQVAKRILPAMGNEIITLVKDTSLAFAIGVGEMFSTAKALVASQ-- 181 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + A LI F +++++ + ++ + Y D Sbjct: 182 --VSMVPFAIAALIYWVFNFVVEMLLGAAEKKLDYYHD 217 >gi|28870259|ref|NP_792878.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28853506|gb|AAO56573.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 219 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 112/208 (53%), Gaps = 6/208 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M L+ S PQL+ A TL I+ ++ V S + G V+R + + + Sbjct: 1 MASSGLELLWVSAPQLITGA-GRTLGISLLAIVFSSVGGLCYGVLRSL-GKRWLEIPLRI 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ +FR P+LV L++ F+GLP G+ +F ++ L+L ++ + E++R + SIP+ Sbjct: 59 YLELFRAIPVLVWLYLFFFGLPIFFGLSIPAFWCAVLVLSLWGASEVGEVVRGGLRSIPR 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A AIGL Q ++LPQ + P+ + + ++K++S+A I + +I + Q Sbjct: 119 GQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVIDITKVGQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCY 207 +I+ TY+ ++IY F++L CY Sbjct: 179 QIIERTYESVLIY---GFLFLFFFIVCY 203 >gi|293392694|ref|ZP_06637013.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] gi|291424811|gb|EFE98021.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] Length = 218 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 52/147 (35%), Positives = 87/147 (59%), Gaps = 3/147 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y +F+GTPLL+QLF+ F+GL GI + A ++LTL SA++ +I SI ++PKG Sbjct: 56 YAELFQGTPLLMQLFLAFFGLALFGIDVSPWAAAALALTLFTSAFLVDIWSGSIAALPKG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ +GL QT+ +I+PQ + + P + ++K T++AS I E+ + Sbjct: 116 QWEAARCLGLGFGQTLLRVIVPQAVRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTM 175 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCY 207 + + TYQP ++ +A Y ++ CY Sbjct: 176 LNNVTYQPFKVFGLVALGYFLM---CY 199 >gi|260769233|ref|ZP_05878166.1| arginine ABC transporter permease protein ArtM [Vibrio furnissii CIP 102972] gi|260614571|gb|EEX39757.1| arginine ABC transporter permease protein ArtM [Vibrio furnissii CIP 102972] Length = 222 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 91/163 (55%), Gaps = 10/163 (6%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI---------IISLTLNFSAYISEIIRSSI 114 +F GTPLLVQ+F+++YG + +S + + +++L LN +AY S++ + + Sbjct: 55 LFTGTPLLVQIFLVYYGPGQFEWIRESVLWVWLSKPWFCAMVALALNTAAYSSQLFKGAF 114 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IP GQW A A+G+ + T+R ++LP + + S+E I + K TS+ASTITI ++ Sbjct: 115 NAIPDGQWQACRALGMNKIATLR-VLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDL 173 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 AQRI + TY L ++ YL + ++ +IE Sbjct: 174 MGYAQRINAQTYDTLTVFGVAGLFYLSVNGLLTLVFRQIERKA 216 >gi|322372850|ref|ZP_08047386.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus sp. C150] gi|321277892|gb|EFX54961.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus sp. C150] Length = 232 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 64/185 (34%), Positives = 105/185 (56%), Gaps = 10/185 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I+ + +++L++G + + ++ I YV IF+ TPLLVQ V+FYG Sbjct: 33 TLGISIGALIVALLLGLIFGAMSST-HNKVLRGIARVYVEIFQNTPLLVQFVVVFYG--- 88 Query: 84 IGIVFDSFVAIIISLT------LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 I I+ D + + ISLT + AYISEIIR+ I ++PKGQ +A+ + G T T+R Sbjct: 89 ISILTDGHIMLPISLTAILCVGIYTGAYISEIIRTGIEAVPKGQTEAALSQGFTYADTMR 148 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 IILPQ + T PL+++ ++++K+TS + I+ +I TA+ T + + A Sbjct: 149 IIILPQAVRTILPPLTNQVVNLIKNTSTVAIISGADIMFTAKAWAYDTTNYVPAFAGAAL 208 Query: 198 VYLIL 202 +Y I+ Sbjct: 209 LYFIM 213 >gi|308187617|ref|YP_003931748.1| Histidine transport system, permease component [Pantoea vagans C9-1] gi|308058127|gb|ADO10299.1| Histidine transport system, permease component [Pantoea vagans C9-1] Length = 238 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 108/196 (55%), Gaps = 11/196 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + +S I + +A+ R+ + IS + + ++FRGTPL VQL V Sbjct: 20 FTGVAITLWLLILSVTIGGCLAILLAIARVS-PNRFISFPVWLFTYVFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++ TLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTELLNAFFRSGLNCTLLAFTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + T+ S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSTFKLYRCIILPSALRTALPVYSNEVILMLHSTALAFTATVPDLLKVARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILT 203 P + A +YLI++ Sbjct: 199 PFTAFGLAAVLYLIIS 214 >gi|291563078|emb|CBL41894.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [butyrate-producing bacterium SS3/4] Length = 229 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 113/202 (55%), Gaps = 16/202 (7%) Query: 4 EWFNLIID---SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS----- 55 E+ N+++ + L + +TL + ++ +IS + G +A++R S+ I Sbjct: 2 EFLNVMLKVWMKYWNLFLQGLGMTLFMGLLTVLISTVFGSLMALMRR--SNVGIGKFKPL 59 Query: 56 -LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRS 112 LI YV I RGTP+L+QL+ ++ LP F+ F ++ + +N +AY+ EI+R+ Sbjct: 60 RLIATVYVEIIRGTPILLQLYFFYFMLPTWLPFFNLSEFTCVMTACCVNSTAYVCEIVRA 119 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++ GQ +A+ ++GL +QT+ HI+LPQ + L +EF++I+K TS+AST I Sbjct: 120 GIQAVDVGQTEAARSLGLNARQTMIHIVLPQAVKNILPALCNEFVAIVKETSLASTFFIG 179 Query: 173 EI---FQTAQRIVSTTYQPLII 191 E+ F+T + +PL I Sbjct: 180 ELMTQFKTINGLTFRVLEPLTI 201 >gi|323339556|ref|ZP_08079831.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ruminis ATCC 25644] gi|323093036|gb|EFZ35633.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ruminis ATCC 25644] Length = 248 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 100/182 (54%), Gaps = 2/182 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++ S P + ++ + +TL + S+++G ++++ +F ++ I+ YV + Sbjct: 32 FEVVKASLP-MFFSGLKLTLLYSFFGIAGSIVVGLACSLVK-YFKIAVLKRIVSAYVELA 89 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL+QLF ++Y P IG+ + I+ L AY+SE + ++PK Q D+ Sbjct: 90 RNTPLLIQLFFLYYAFPVIGLKMSASTCGIVDLIFLGGAYMSEGFNGGLDAVPKSQIDSG 149 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 AIG+++ Q +++ PQ + S LS+ I ++K TS+ S I IPE+ TA ++ Sbjct: 150 KAIGMSKAQLAFYVVFPQGLALSVPALSANIIFLIKETSIFSVIAIPELTNTALDLIGLY 209 Query: 186 YQ 187 Y+ Sbjct: 210 YR 211 >gi|212716829|ref|ZP_03324957.1| hypothetical protein BIFCAT_01772 [Bifidobacterium catenulatum DSM 16992] gi|212660114|gb|EEB20689.1| hypothetical protein BIFCAT_01772 [Bifidobacterium catenulatum DSM 16992] Length = 218 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 104/173 (60%), Gaps = 4/173 (2%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 V+TL I+ V+S+ +G A I I ++ I+ Y+ + R TPLLVQL+ +++GL Sbjct: 19 VMTLFISVFGIVLSIAVGLICAGIEIA-RIPVLKHIVRVYIELSRNTPLLVQLYFLYFGL 77 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 P +GIV+ + I+ L +Y++E +R + +IP Q +++Y +GL++ QT+ +++ Sbjct: 78 PKLGIVWSAEQCAIVGLGFLGGSYMAEAMRGGLETIPNVQRESAYVLGLSQWQTLSRVVI 137 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS---TTYQPLII 191 PQ I+TS + + I ++K +SV S I + ++ A+ ++ +TY+ L++ Sbjct: 138 PQAISTSIPGVVANVIFLIKESSVVSAIALADVMYMAKDLIGMYYSTYESLLM 190 >gi|170695841|ref|ZP_02886982.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170139265|gb|EDT07452.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 216 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 115/208 (55%), Gaps = 8/208 (3%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFR 66 + P LL+AA+ T+ ++ + L IGFF+AV + YV+ FR Sbjct: 8 VQGMPLLLHAALA-TIGVS----LTGLFIGFFVAVGVCAARLSPNRAARRFGGAYVFFFR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G P+LVQL +++Y LP GI VA I +++L ++YI+EI+R +SIP G +A+ Sbjct: 63 GVPMLVQLLLVYYLLPFAGINVSPLVAAISAVSLCSASYIAEILRGGFLSIPPGHIEAAR 122 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +GL+ T+R I++PQ + L +E + ++K++S+ S + + E+ +TAQ + ++TY Sbjct: 123 MLGLSPFDTLRRILVPQAFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNLAASTY 182 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIE 214 +PL Y +Y ++ ++ E Sbjct: 183 RPLEAYVAAGLIYFVICGALALVAHAAE 210 >gi|116252667|ref|YP_768505.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115257315|emb|CAK08410.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 219 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 59/178 (33%), Positives = 95/178 (53%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L A + VT+ + S ++ GF +A++R F I+L + I P L L Sbjct: 12 QGLVAGLGVTVFVTIASLALAAAFGFLLALLRQFAGIRFINLAIDACCEILCNVPALTHL 71 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F++++GL +G+ S A I+ L L +A I R+ ++P GQ +A+ A GLT Q Sbjct: 72 FILYFGLASLGVKLTSITAAILGLGLIGAAITCAIFRAGFAALPGGQAEAALAAGLTPLQ 131 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 TI I+ PQ + + L + + +LK TSV S I PEI A+ +V++++Q +IY Sbjct: 132 TIFGILTPQAMRIALPGLGNYAVQLLKDTSVVSAIAAPEIMFFARSMVTSSFQTTMIY 189 >gi|120603262|ref|YP_967662.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris DP4] gi|120563491|gb|ABM29235.1| amino acid ABC transporter membrane protein 1, PAAT family / amino acid ABC transporter membrane protein 2, PAAT family [Desulfovibrio vulgaris DP4] Length = 596 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 66/186 (35%), Positives = 106/186 (56%), Gaps = 5/186 (2%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI-MHFYVWIFRGTPLLVQLFVI 77 + +L +A I+ +S IG + + R SD I I Y+ + RG PL++ +F I Sbjct: 388 GGLAYSLLMAVIAISVSFFIGLVVGIGRT--SDNRICRIPCLLYIELIRGNPLIIVIFWI 445 Query: 78 FYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 ++ +P + F+ F + I+LTL AY++EI+R+ I +IP GQ +A+Y+ GLT QT+ Sbjct: 446 YFFIPVLFNTFFNVFWSATIALTLFTGAYLAEIVRAGIQNIPAGQVEAAYSTGLTFVQTM 505 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST-TYQPLIIYCEL 195 R IILPQ + + +FI+I K TS+A + + E+ AQ I + P+ IY + Sbjct: 506 RRIILPQALKQMIPAIVGQFIAIFKDTSLAFVLGVLELTFVAQGINNRLMVYPMEIYGTV 565 Query: 196 AFVYLI 201 AF+Y I Sbjct: 566 AFLYFI 571 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/178 (33%), Positives = 100/178 (56%), Gaps = 12/178 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRI-FFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + VT+ I+ IS ++L +G + + R+ F+ + L V FR TPLLVQLF + Sbjct: 60 GLGVTVRISLISSALALGLGTVLGIARLSLFAP--LRLTATAVVEFFRNTPLLVQLFFWY 117 Query: 79 YGLPHI------GIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 + P I ++F F I L++ SA+++E+IR+ + SIPKG +A+Y+ G Sbjct: 118 FAFPAILPENIRELLFTGNFEFWCATIGLSVYTSAFMAEVIRAGLQSIPKGLLEAAYSSG 177 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 L Q +R IILP PL SEF++ +K++S+A + + E+ +Q++ S T++ Sbjct: 178 LNYVQVLRTIILPMAFRAIIPPLGSEFLNNMKNSSLAMVVGVAELTWQSQQVESLTFK 235 >gi|224824054|ref|ZP_03697162.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] gi|224603473|gb|EEG09648.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] Length = 264 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 99/170 (58%), Gaps = 15/170 (8%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ +A +++VI+L IG + V+R D+ + YV +FR PLLVQLFV ++ +P Sbjct: 50 TVAVALVAWVIALAIGSVLGVMRTL-PDSKATSFASAYVALFRNVPLLVQLFVWYFLVPD 108 Query: 84 -------------IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + +++++++ L L +A + E +R+ I ++PKGQ A+ A+G Sbjct: 109 WLPESAQTWFKQDLSPTTSAYISVVVCLALFTAARVCEQVRTGIQALPKGQSHAALAMGF 168 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 +R Q RH++LPQ PL++EF++I K++SVAS I + E+ QT Q Sbjct: 169 SRVQIYRHVLLPQAFRIIIPPLTTEFLAIFKNSSVASLIGLMELLAQTKQ 218 >gi|82544788|ref|YP_408735.1| histidine transport, membrane protein M [Shigella boydii Sb227] gi|81246199|gb|ABB66907.1| histidine transport, membrane protein M [Shigella boydii Sb227] gi|320183763|gb|EFW58597.1| Histidine ABC transporter, permease protein HisM [Shigella flexneri CDC 796-83] gi|332093400|gb|EGI98458.1| histidine transport system permease protein hisM [Shigella boydii 3594-74] Length = 238 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 115/213 (53%), Gaps = 11/213 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + +S VI ++ F+A+ R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLILSVVIGGVLALFLAIGRVS-SNKYIQFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+ G+ +A+ A Sbjct: 79 YSGIYTLEIVKGTEFLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVLHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + + S+E I +L ST++A T T+P++ + A+ I + TYQ Sbjct: 139 YGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P + A +YLI++ + + E QH Sbjct: 199 PFTAFGIAAVLYLIISYVLISLFRRAEKRWLQH 231 >gi|328958153|ref|YP_004375539.1| glutamine-binding periplasmic protein [Carnobacterium sp. 17-4] gi|328674477|gb|AEB30523.1| glutamine-binding periplasmic protein [Carnobacterium sp. 17-4] Length = 485 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 64/161 (39%), Positives = 96/161 (59%), Gaps = 8/161 (4%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISL---IMHFYVWIFRGTPLLVQLFVIFYGLPH-IG 85 ISF I+L+ G VI FS T L I YV I RG PL+V F +++ +P + Sbjct: 295 ISFAIALVAG----VILGLFSATSNKLLIGISSIYVTIMRGIPLIVLAFFVYFSIPQFLN 350 Query: 86 IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTI 145 I ++VA II+L+LN +AYISE++R I ++ GQ +A+ ++GL + ++R IILPQ I Sbjct: 351 IQLSAYVAGIITLSLNTTAYISELVRGGIQAVAVGQLEAARSLGLPYQTSMRKIILPQAI 410 Query: 146 TTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++F+ LK TS+ S I I E+ QT + I++ TY Sbjct: 411 KIMIPSFINQFVITLKDTSILSVIGIVELTQTGKIIIARTY 451 >gi|330808727|ref|YP_004353189.1| amino acid ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376835|gb|AEA68185.1| putative amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 220 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 111/202 (54%), Gaps = 1/202 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+A + ++ + ++ V+ +IG ++ + + T + FYV + RGTP+ V + Sbjct: 18 LWAGFLTSVQCSLLAIVLGTLIGLAAGLV-LTYGRTWMRAPFRFYVDLIRGTPVFVLVLA 76 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 FY P +G +F A ++ LTL ++++EI+R ++ ++P+GQ +AS AIGLT Q++ Sbjct: 77 CFYMAPALGWQIGAFQAGVLGLTLFCGSHVAEIVRGALQALPRGQMEASQAIGLTFYQSL 136 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +++LPQ + + I+K++++ S I + E+ + Q+I++ T+ L Y Sbjct: 137 GYVLLPQALRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQIIARTFMTLEFYLFAG 196 Query: 197 FVYLILTSFCYIIQIKIESSVT 218 F++ I+ ++ IE V Sbjct: 197 FLFFIINYAIELLGRHIEKRVA 218 >gi|319942068|ref|ZP_08016387.1| hypothetical protein HMPREF9464_01606 [Sutterella wadsworthensis 3_1_45B] gi|319804452|gb|EFW01330.1| hypothetical protein HMPREF9464_01606 [Sutterella wadsworthensis 3_1_45B] Length = 292 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 62/190 (32%), Positives = 108/190 (56%), Gaps = 7/190 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 ++ ++T+ ++ + V+SL++G A R+ + SL YV RGTPL++Q Sbjct: 89 IWDGFLLTIGVSAAAMVLSLLLGILSAAAKLSRVLLLRDLSSL----YVVFIRGTPLIMQ 144 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 +++ FY + V D F A +I L++ AYISEIIR S +SI Q +++ A+G TR Sbjct: 145 IYLFFYLVGTAWGVDDRFWAGVIILSVFEGAYISEIIRGSYLSIDPAQIESAKAVGFTRL 204 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q +R +I+PQ + L+ +F S++K +S+ S I++ E+ Q + + + + + Y Sbjct: 205 QQLRFVIVPQMAARTLPALAGQFASVIKDSSLLSMISVVELTQAMREVSAVNLKLVECYL 264 Query: 194 ELAFVYLILT 203 L +YLILT Sbjct: 265 FLGVLYLILT 274 >gi|317402647|gb|EFV83205.1| amino acids ABC transporter [Achromobacter xylosoxidans C54] Length = 233 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 112/202 (55%), Gaps = 10/202 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +P L +V TL +A ++++++ ++G +AVIR+ S +LI YV R P+ Sbjct: 13 GEYPAWLLRGLVTTLALAGLAWILAFLVGSLLAVIRLTGSPVANALIA-LYVAFHRNVPM 71 Query: 71 LVQLFVIFYGLPHI--GIVFD-------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 LV + ++G+P + + D F+ I++ L SAY+ E +RS++ IP GQ Sbjct: 72 LVHILFWYFGVPALLPQVATDWLNTHGSEFILSCIAIGLVMSAYVCEDLRSAVRGIPPGQ 131 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ A+GL +T+R ++LPQ + PL ++ + ++K+TS+A I + E+ + I Sbjct: 132 VEAARALGLGFLRTMRCVVLPQAFRIAIPPLLNQTLLLVKNTSLAMAIGVAELTAAGREI 191 Query: 182 VSTTYQPLIIYCELAFVYLILT 203 + T++ Y + +YL+L+ Sbjct: 192 ENYTFRTFEAYAVVTAIYLLLS 213 >gi|297199263|ref|ZP_06916660.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sviceus ATCC 29083] gi|197716445|gb|EDY60479.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sviceus ATCC 29083] Length = 249 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 51/147 (34%), Positives = 84/147 (57%), Gaps = 3/147 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y +F+ PLL +F+ ++GL GI D F A +SL + ++AY+SEI RS+I + G Sbjct: 59 YTEVFKNVPLLAIIFLTYFGLASAGIRLDVFTAGCLSLVVFYAAYLSEIFRSAISGVHAG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A+GL R HI+LPQ + + ++ + +LKSTS+ T++ E+ + Sbjct: 119 QTEAGEALGLGRAGIFGHIVLPQAVRQALPGTNTMLVDLLKSTSLLVTVSAAELMSEGRL 178 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCY 207 I S T++ L +Y ++ +Y L CY Sbjct: 179 ITSATFRALEVYLVISAIYFAL---CY 202 >gi|150398297|ref|YP_001328764.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150029812|gb|ABR61929.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 274 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 111/204 (54%), Gaps = 25/204 (12%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI-FYGL 81 VT+ + + FV++ ++G +A++ + + I FY + RG P+LV LF I F G Sbjct: 53 VTVFVTLVGFVLATLLGLGVALMALS-GHVALRQIARFYTEVIRGVPILVLLFYIAFVGA 111 Query: 82 PHIGIVFDSFVAI----------------------IISLTLNFSAYISEIIRSSIISIPK 119 P + + +FVA II+L + +SA+I+E+ R+ I S+ K Sbjct: 112 PAL-VTAANFVAAPLISAGWMEAFVVRDVSLMWRAIIALMIGYSAFIAEVFRAGIQSVDK 170 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ A+GL+R Q R ++ PQ I PL ++F++++K +S+ S + + ++ Q + Sbjct: 171 GQVEAAKALGLSRYQRFRLVVFPQAIRVILPPLGNDFVAMVKDSSLVSVLGVADVTQMGK 230 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 S +++ Y +A+VYL+LT Sbjct: 231 IYASGSFRFFETYSIVAYVYLVLT 254 >gi|242278993|ref|YP_002991122.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242121887|gb|ACS79583.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 233 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 122/219 (55%), Gaps = 26/219 (11%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTII 54 +++W ++ + Q + + VTL I+ +S V +L++G +AV+R+ +FS + Sbjct: 4 QFDWNLVLSGQYGQWIIDGVKVTLQISAVSIVFTLLLGTIVAVMRMSKFKPFEWFSFAFV 63 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYG----LPHIGI---VFD---SFVAIIISLTLNFSA 104 FR TPLL+Q+F ++G LP G+ ++D F A +ISLT+ +A Sbjct: 64 EF--------FRNTPLLIQIFFWYFGSYAILPE-GVNEWLYDHDFEFAAGVISLTVYTAA 114 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 +++E IR+ I SIPK Q +AS A GL+ Q R++ILPQ PL S+ ++++K++S Sbjct: 115 FVAEEIRAGINSIPKNQLEASRATGLSFLQAYRYVILPQAFRIIIPPLISQSLNLIKNSS 174 Query: 165 VASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + TI + ++ A++I S T+ + +YL ++ Sbjct: 175 LVMTIGVMDLTYMARQIESYTFHGFEAFTVATVIYLCIS 213 >gi|325125966|gb|ADY85296.1| Glutamine ABC transporter permease protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 493 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 97/167 (58%), Gaps = 1/167 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I S I L++G A++R+ + ++ I Y+ RGTP +VQ+ +++G+ Sbjct: 294 TMIITICSITIGLVLGVIFALMRLS-KNKLLHAIAVCYIEFLRGTPQMVQIMFVYFGVGM 352 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + + A II++ LN AY++E IRS I S+ KGQ +A+ ++GL++ +T R+++ PQ Sbjct: 353 LIKNMPALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLSQAKTYRYVVFPQ 412 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + L +EFI++ K +S+ S I + E+ + + TY+ ++ Sbjct: 413 ALKNIWPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVM 459 >gi|317047306|ref|YP_004114954.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316948923|gb|ADU68398.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 246 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 104/180 (57%), Gaps = 14/180 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++C +++I+ +G F ++R + ++S I YV +FR PL+VQ F Sbjct: 25 LWSGFQVTIAVSCCAWIIAFFVGSFFGILRTV-PNRLLSTIGTCYVELFRNIPLIVQFFF 83 Query: 77 IFYGLPHI-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + P + G+ F S F + ++ L L A +SE +R++I S+P+GQ + Sbjct: 84 WYLVAPELVGESLGMWFKSELDPNIQFFSSSVVCLGLFTGARVSEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 >gi|237797983|ref|ZP_04586444.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020834|gb|EGI00891.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 221 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 108/204 (52%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F ++ + LL A+ TL + I ++ + +G AV+R + + I Sbjct: 1 MAYHFDFTPVLQNLDVLLRGALF-TLELTAIGTLLGVSLGIVGAVVRAWKIQPFAT-IFA 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TP LVQLF IF+GLP +G+ + A ++++ +N AY +EI+R+ I +IPK Sbjct: 59 IYVELIRNTPFLVQLFFIFFGLPSLGVQITEWQAAVLAMVVNLGAYSTEIVRAGIQAIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +AS A+ + R + R+++L + LSS+ I ++ ++V S I E+ A Sbjct: 119 GQLEASAALAMNRYEAFRYVVLVPALGKVWPALSSQIIIVMLGSAVCSQIATEELSFFAN 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I S ++ Y +YL + Sbjct: 179 FIQSRNFRSFETYIVTTLIYLAMA 202 >gi|170770016|ref|ZP_02904469.1| arginine ABC transporter, permease protein ArtM [Escherichia albertii TW07627] gi|170121082|gb|EDS90013.1| arginine ABC transporter, permease protein ArtM [Escherichia albertii TW07627] Length = 222 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 123/220 (55%), Gaps = 18/220 (8%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ P+L+ + +L + S +++LI+ +I + ++ L+ Y+ +F GT Sbjct: 1 MLEYLPELM-KGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLV-RGYITLFTGT 58 Query: 69 PLLVQLFVIFYG------------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 PLLVQ+F+I+YG L H+ + + ++ +I+L+LN +AY +++ +I + Sbjct: 59 PLLVQIFLIYYGPGQFPTLQEYPALWHL--LSEPWLCALIALSLNSAAYTTQLFYGAIRA 116 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQW + A+G+++K T+ I+LP + S S+E + + KSTS+A TIT+ E+ Sbjct: 117 IPEGQWQSCSALGMSKKDTL-AILLPYALKRSLSSYSNEVVLVFKSTSLAYTITLMEVMG 175 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 +Q + TY ++++ +YL++ ++ IE Sbjct: 176 YSQLLYGRTYD-VMVFGAAGIIYLVVNGLLTLMMRLIERK 214 >gi|89096759|ref|ZP_01169651.1| amino acid (glutamine) ABC transporter substrate binding protein/permease protein [Bacillus sp. NRRL B-14911] gi|89088774|gb|EAR67883.1| amino acid (glutamine) ABC transporter substrate binding protein/permease protein [Bacillus sp. NRRL B-14911] Length = 243 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 46/136 (33%), Positives = 83/136 (61%), Gaps = 1/136 (0%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIR 111 +I+ ++ Y+ FRGTP++VQ VI+YG G+ + A II +++N AY++EI+R Sbjct: 62 VINFVLSVYIEFFRGTPMIVQAMVIYYGSALAFGVDINVLAAAIIVVSINTGAYMAEIVR 121 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I+SI KGQ++A+ AIG+ QT+ +++LPQ I + F+ +K TSV + I++ Sbjct: 122 GGIVSIDKGQFEAAQAIGMNHYQTMWNVVLPQVIRNILPATGNHFVINIKDTSVLNVISV 181 Query: 172 PEIFQTAQRIVSTTYQ 187 E++ + + ++ Sbjct: 182 SELYFMTKSVAGNNFR 197 >gi|138895921|ref|YP_001126374.1| amino acid ABC transporter permease [Geobacillus thermodenitrificans NG80-2] gi|196248812|ref|ZP_03147512.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Geobacillus sp. G11MC16] gi|134267434|gb|ABO67629.1| Amino acid ABC transporter (permease) [Geobacillus thermodenitrificans NG80-2] gi|196211688|gb|EDY06447.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Geobacillus sp. G11MC16] Length = 237 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 115/210 (54%), Gaps = 14/210 (6%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR----IFFSDTIISL 56 M ++W N++ D FP L++ A+ +TL + + +SL++G ++R +F T+ + Sbjct: 1 MIWDW-NIVKDVFP-LIFRAMWLTLGLTLACYAVSLVLGIIWTLLRRAPWAWFRWTV-NG 57 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYG---LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 ++ F R TP LVQL+ +FY +PH+G+ A II L +++S Y SE+ RS Sbjct: 58 VLEF----IRSTPPLVQLYFLFYAWPLVPHVGVTLSPIAAAIIGLGVHYSTYTSEVYRSG 113 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++ KGQW+A+ A+ +R +T +ILPQ I L + I + K ++I + Sbjct: 114 IDAVDKGQWEAALALNFSRARTWTKVILPQAIPPIIPMLGNYLIIMFKEIPTTASIGVMG 173 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + TA+ + + L + +AF +L+L+ Sbjct: 174 MMLTAKMYGAQHWVYLEPFTIVAFFFLLLS 203 >gi|119383822|ref|YP_914878.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119373589|gb|ABL69182.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC transporter membrane protein [Paracoccus denitrificans PD1222] Length = 253 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 13/214 (6%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L + ++ TL +A + I+ IG + V R + ++L YV +FR P+LVQ+ Sbjct: 17 QWLLSGLMWTLLLAVGGWWIAFAIGVLVGVGRTS-RNRAVALAARLYVEVFRNIPVLVQM 75 Query: 75 FVIFYGLPHI---GIV---------FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 F+ ++ LP + G+ + +F + L L +A I+E +R+ I ++P GQ Sbjct: 76 FLWYFVLPELLPTGLGDRIKQMPPPWGAFFPALACLGLYTAARIAEQVRAGIEALPAGQD 135 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A+GL+ RHII+PQ + L+SE + I K+TSVA TI + E+ A++I Sbjct: 136 EAAAALGLSPWAARRHIIVPQALRLIVPSLTSEVMGIYKNTSVALTIGLLELTAQARQIS 195 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 T+Q + +YL+L Y + + I+ Sbjct: 196 EATFQTFGAFAAATIIYLLLALVAYRLMLWIDRR 229 >gi|317472159|ref|ZP_07931491.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA] gi|316900563|gb|EFV22545.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA] Length = 225 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 108/196 (55%), Gaps = 23/196 (11%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLIMHFYVWIFRGTPLLVQL- 74 + +TL ++ ++ ++ + +G +A++R+ T++S I + Y+ I RGTP + QL Sbjct: 21 GLKMTLLVSLLAIILGVALGTILALMRMTAERRGKSTLLSKIAYVYIDIIRGTPTVTQLL 80 Query: 75 ---FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 FV+ G+ D + ++ LN +AY++EIIR+ I+++ GQ + ++GL+ Sbjct: 81 IMYFVVLKGV-------DGLIVGTVTFGLNSAAYVAEIIRAGILAVDHGQMEGGRSLGLS 133 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 QT++ IILPQ + L +EFI ++K T++ ++I ++ + A + S TY+ Sbjct: 134 YGQTMKDIILPQAVKNILPALGNEFIVLIKETAILGYVSIVDLTKVADFVTSRTYE---- 189 Query: 192 YCELAFVYLILTSFCY 207 AF LI T+ Y Sbjct: 190 ----AFAPLIGTAIIY 201 >gi|302189137|ref|ZP_07265810.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. syringae 642] Length = 277 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 63/177 (35%), Positives = 106/177 (59%), Gaps = 1/177 (0%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS 97 +GF A+ R+ S + I FY FRGTPLL+Q+ +I+ GLP +GIV + A +I+ Sbjct: 91 LGFVTALARLS-SSAVAFGIASFYASFFRGTPLLIQILLIYLGLPQLGIVPGAITAGVIA 149 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 L+LN+ AY+SEI R+ II + GQ +A+ A+ L Q + LPQ + T P +++FI Sbjct: 150 LSLNYGAYLSEIFRAGIIGVSAGQREAAMALALRPAQIFWRVTLPQAMRTIIPPTTNQFI 209 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S+LK +S+ S + + E+ AQ ++Y+ + + A +Y I++ ++Q ++E Sbjct: 210 SMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266 >gi|218661449|ref|ZP_03517379.1| probable amino acid ABC transporter, permease protein [Rhizobium etli IE4771] Length = 222 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 106/196 (54%), Gaps = 2/196 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I+ F L + +T+ + I V+ +GF + + R + + I YV FRGT Sbjct: 8 ILLRFENALLLGLWMTIKLTIICIVLGCSLGFLVGLARTS-RNLALRAIAGTYVEFFRGT 66 Query: 69 PLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 P+L+QLF IF+ LP + G+ + + +I+LTL A SE R+S+ SI + Q DA A Sbjct: 67 PVLIQLFWIFFCLPLLLGVELSNLASGVIALTLYMGAITSETFRASLKSIGREQLDACVA 126 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL ++ + +++LPQ + + L S +S+ K +++ S + + ++ Q I + T + Sbjct: 127 LGLPQRVRVVNVVLPQAVLRAVPTLLSNCVSLFKESALVSAVGMADLMFVGQNISNNTAR 186 Query: 188 PLIIYCELAFVYLILT 203 P+ + +A +Y ++ Sbjct: 187 PVEVLTVVALIYFVIA 202 >gi|329998469|ref|ZP_08303106.1| arginine ABC transporter permease protein ArtM [Klebsiella sp. MS 92-3] gi|328538659|gb|EGF64755.1| arginine ABC transporter permease protein ArtM [Klebsiella sp. MS 92-3] Length = 222 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 61/219 (27%), Positives = 120/219 (54%), Gaps = 14/219 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D P+LL + +L + S +++LI+ +I + ++ I+ Y+ +F GT Sbjct: 1 MLDYLPELL-KGLHTSLTLTVASIIVALILSLIFTIILTLKTPGLV-WIVRGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPSLQEYPWLWHLISEPWLCALIALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQW + A+G+++K T+ I+LP + S+E + + KSTS+A TIT+ E+ Sbjct: 119 DGQWQSCSALGMSKKDTL-AILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGQG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 Q + TY ++++ +YLI+ ++ +E Sbjct: 178 QLLYGRTYD-VMVFGAAGIIYLIVNGLLTLLMRLVERKA 215 >gi|225573416|ref|ZP_03782171.1| hypothetical protein RUMHYD_01608 [Blautia hydrogenotrophica DSM 10507] gi|225039226|gb|EEG49472.1| hypothetical protein RUMHYD_01608 [Blautia hydrogenotrophica DSM 10507] Length = 213 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 115/207 (55%), Gaps = 11/207 (5%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q + I +T + V +LI+G + V+R F ++S I+ YV RG P LV L Sbjct: 3 QYIVDGIGITFKLVPCVVVSTLIVGILVGVVR-FRKIPVVSQIIDLYVTAMRGIPPLVVL 61 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 ++++ + + +F+ ++LTL AY+SE++R + +IP+GQ +A ++GL + Sbjct: 62 MMLYFTVN----MSSAFMTAFVALTLYHGAYVSEVVRGGLTAIPRGQMEAGKSLGLGFVR 117 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + I LPQ + L ++I ++K T++ S + + ++ A+ +++ TY+P+ IY Sbjct: 118 IMFSIYLPQIMKQIIPTLCGQYILVVKDTTLVSVVGLQDLMWNAKELMAVTYKPMEIYLI 177 Query: 195 LAFVYLILTSFCYIIQI---KIESSVT 218 + +Y ++ C++I I ++E+ VT Sbjct: 178 VGLIYFVI---CWVIDIIANRVENKVT 201 >gi|206561694|ref|YP_002232459.1| glutamate/aspartate transport system permease [Burkholderia cenocepacia J2315] gi|198037736|emb|CAR53680.1| glutamate/aspartate transport system permease protein [Burkholderia cenocepacia J2315] Length = 246 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 65/183 (35%), Positives = 102/183 (55%), Gaps = 13/183 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ +++VI+LI+G V+R + +S I YV IFR PL+VQ FV Sbjct: 26 LMSGFWVTIEVSLVAWVIALIVGSLFGVLRTV-PNKWLSAIGTVYVSIFRNIPLIVQFFV 84 Query: 77 IFYGLPH-----IGIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + +P IG F A I+ L L A + E +RS I ++PKGQ A Sbjct: 85 WYLVIPELLPASIGTWIKQLPPTTQFFTASIVCLGLFTGARVCEQVRSGINALPKGQRAA 144 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 145 GLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDY 204 Query: 185 TYQ 187 T Q Sbjct: 205 TAQ 207 >gi|104774186|ref|YP_619166.1| amino acid ABC transporter permease/substrate-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423267|emb|CAI98100.1| Amino Acid ABC transporter, substrate binding /permease protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 493 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 97/167 (58%), Gaps = 1/167 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I S I L++G A++R+ + ++ I Y+ RGTP +VQ+ +++G+ Sbjct: 294 TMIITICSITIGLVLGVIFALMRLS-KNKLLHAIAVCYIEFLRGTPQMVQIMFVYFGVGM 352 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + + A II++ LN AY++E IRS I S+ KGQ +A+ ++GL++ +T R+++ PQ Sbjct: 353 LIKNMPALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLSQAKTYRYVVFPQ 412 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + L +EFI++ K +S+ S I + E+ + + TY+ ++ Sbjct: 413 ALKNIWPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVM 459 >gi|299821271|ref|ZP_07053159.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] gi|299816936|gb|EFI84172.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] Length = 254 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 115/221 (52%), Gaps = 16/221 (7%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGTPLLVQLFV 76 A+V T+P+ L+ GF IA++ F I+ I FYV FR TP ++ + + Sbjct: 33 AMVKTIPLTLAMTFFPLLFGFLIAILMSFIQIKHVRILEPISKFYVSFFRSTPAILHIML 92 Query: 77 IFYGLP----------HIGIVFDSF-VAIIISLTLNFSA--YISEIIRSSIISIPKGQWD 123 I+ G+P +G+ + VAI + + L+F+A Y++E IRS II++ GQ + Sbjct: 93 IYLGIPLIVDKLSSQFDLGLSANKIPVAIFVIIALSFTAGSYLTESIRSGIIAVDAGQIE 152 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+Y+IG+T ++ +R ++ PQ + ++ I L +TS+A+ + +PEI TA + S Sbjct: 153 AAYSIGMTHREMLRRVLFPQAFIIALPNFTNLAIGFLHTTSIAAIVAVPEITGTATIVAS 212 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 Y L + A +Y +LT I +E +T + V Sbjct: 213 DNYAFLDAFIAAAIIYWLLTMIIEAIHALLEKKLTVYQGGV 253 >gi|308071440|ref|YP_003873045.1| amino acid ABC transporter permease ytmL [Paenibacillus polymyxa E681] gi|305860719|gb|ADM72507.1| Probable amino-acid ABC transporter permease protein ytmL [Paenibacillus polymyxa E681] Length = 238 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 65/219 (29%), Positives = 119/219 (54%), Gaps = 20/219 (9%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + ++ S PQ++ + VTL IA +S ++ IIG A+IRI+ +++ + YV R Sbjct: 8 DYMLKSLPQIV-EYLPVTLWIAFVSMLLGGIIGLATALIRIY-KVPVLAPLSTLYVSYIR 65 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAII---------------ISLTLNFSAYISEIIR 111 GTPL+VQLF+++YG+P F S + +S +LN Y+SE R Sbjct: 66 GTPLIVQLFLVYYGIPKFLYYFQSEYGFLQQFNVYVIPPELFALLSFSLNLGGYLSETFR 125 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++I S+ +GQ++A+ +IG+++ Q + I+LPQ +T + L + IS +K TS I + Sbjct: 126 AAIHSVDRGQFEAANSIGMSQTQIMLKIVLPQALTVALPNLGNTLISTVKDTSFIFMIGV 185 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 ++ A+ + + +Y ++ +Y ++ C II+ Sbjct: 186 VDMMGQAKIMGARALAFFEVYVAVSLIYWLV---CIIIE 221 >gi|169830102|ref|YP_001700260.1| amino-acid ABC transporter permease [Lysinibacillus sphaericus C3-41] gi|168994590|gb|ACA42130.1| Probable amino-acid ABC transporter permease protein [Lysinibacillus sphaericus C3-41] Length = 253 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 115/203 (56%), Gaps = 17/203 (8%) Query: 17 LYAAIVVTLP-------IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 +++AI V LP +A S V+ I G +A ++ S ++ + + Y I R TP Sbjct: 28 IWSAIPVLLPFLKITFLVAGSSIVLGTIFGLLLAAAKLS-SVKLLRKLANLYTTIMRCTP 86 Query: 70 LLVQLFVIFYGLPHIGIVF-------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +V LF+++YG+P + F ++ + ++++ TL F+A +SE++RS+ ++IPKGQ+ Sbjct: 87 SIVLLFLVYYGVPALAENFGLNLHSIETAIFVVVTFTLQFAAIMSEVMRSAYLAIPKGQF 146 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ ++GLT Q R II PQ + + + I++L+ ++A TI + +I A I+ Sbjct: 147 EAAVSVGLTPIQAYRRIIFPQALVVALPNFGNGMIALLQEGALAYTIGLIDIVGKANLII 206 Query: 183 ST--TYQPLIIYCELAFVYLILT 203 ++ L IY LA +Y +L+ Sbjct: 207 ASNINAHALEIYIALAIIYWVLS 229 >gi|330957138|gb|EGH57398.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 221 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 108/204 (52%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F ++ + LL A+ TL + I ++ + +G AV+R + + I Sbjct: 1 MAYHFDFTPVLQNLDVLLRGALF-TLELTAIGTLLGVSLGIVGAVVRAWKIQPFAT-IFA 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TP LVQLF IF+GLP +G+ + A ++++ +N AY +EI+R+ I +IPK Sbjct: 59 IYVELIRNTPFLVQLFFIFFGLPSLGVQITEWQAAVLAMVVNLGAYSTEIVRAGIQAIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +AS A+ + R + R+++L + LSS+ I ++ ++V S I E+ A Sbjct: 119 GQLEASAALAMNRYEAFRYVVLVPALGKVWPALSSQIIIVMLGSAVCSQIATEELSFFAN 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I S ++ Y +YL + Sbjct: 179 FIQSRNFRSFETYIVTTLIYLAMA 202 >gi|296103388|ref|YP_003613534.1| glutamate/aspartate transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057847|gb|ADF62585.1| glutamate/aspartate transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 246 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 119/214 (55%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++ +++I+ ++G ++R + +S I YV +FR PL+VQ F Sbjct: 25 LWSGFQVTVALSITAWIIAFLVGSLFGILRTV-PNRFLSSIGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P +IG+ F S FV+ ++ L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVVPELLPENIGMWFKSELDPNVQFFVSSMMCLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ +F ++ +E + Sbjct: 204 YSAHAWESFTAITLAYVLINAFIMLVMNLVERKI 237 >gi|237740703|ref|ZP_04571184.1| amino acid ABC transporter [Fusobacterium sp. 2_1_31] gi|229422720|gb|EEO37767.1| amino acid ABC transporter [Fusobacterium sp. 2_1_31] Length = 240 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 64/190 (33%), Positives = 106/190 (55%), Gaps = 11/190 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLI 57 K +W I P+ + A I+ TL I I V+S+I+G + I FF +I Sbjct: 21 KMDW-EFIAKYTPEFINAGIL-TLKIGGIGIVLSIIVGILGSWILYENFKFFKQIVIG-- 76 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 YV + R TPLLVQLF +++GLP +G+ + II LT +Y+ E RS++ +I Sbjct: 77 ---YVELSRNTPLLVQLFFLYFGLPKVGLRLSPELCGIIGLTFLGGSYMIETFRSALETI 133 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 K Q +++ ++G+T QT+R++ILPQ+ S L++ I +LK TSV S I++ ++ Sbjct: 134 DKIQKESALSLGMTNWQTMRYVILPQSFVISLPGLTANIIFMLKETSVFSAISLMDMMFV 193 Query: 178 AQRIVSTTYQ 187 + ++ Y+ Sbjct: 194 TKDLIGLYYK 203 >gi|126653498|ref|ZP_01725591.1| putative amino acid ABC transporter, permease protein [Bacillus sp. B14905] gi|126589776|gb|EAZ83910.1| putative amino acid ABC transporter, permease protein [Bacillus sp. B14905] Length = 253 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 115/203 (56%), Gaps = 17/203 (8%) Query: 17 LYAAIVVTLP-------IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 +++AI V LP +A S V+ I G +A ++ S ++ + + Y I R TP Sbjct: 28 IWSAIPVLLPFLKITFLVAGSSIVLGTIFGLLLAAAKLS-SVKLLRKLANLYTTIMRCTP 86 Query: 70 LLVQLFVIFYGLPHIGIVF-------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +V LF+++YG+P + F ++ + ++++ TL F+A +SE++RS+ ++IPKGQ+ Sbjct: 87 SIVLLFLVYYGVPALAENFGLNLHSIETAIFVVVTFTLQFAAIMSEVMRSAYLAIPKGQF 146 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ ++GLT Q R II PQ + + + I++L+ ++A TI + +I A I+ Sbjct: 147 EAAVSVGLTPIQAYRRIIFPQALVVALPNFGNGMIALLQEGALAYTIGLIDIVGKANLII 206 Query: 183 ST--TYQPLIIYCELAFVYLILT 203 ++ L IY LA +Y +L+ Sbjct: 207 ASNINAHALEIYIALAIIYWVLS 229 >gi|330967849|gb|EGH68109.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 219 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 112/208 (53%), Gaps = 6/208 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M L+ S PQL+ A TL I+ ++ V S + G V+R + + + Sbjct: 1 MASSGLELLWVSAPQLITGA-GRTLGISLLAIVFSSVGGLCYGVLRSL-GKRWLEIPLRI 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ +FR P+LV L++ F+GLP G+ +F ++ L+L ++ + E++R + SIP+ Sbjct: 59 YLELFRAIPVLVWLYLFFFGLPIFFGLSIPAFWCAVLVLSLWGASEVGEVMRGGLRSIPR 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A AIGL Q ++LPQ + P+ + + ++K++S+A I + +I + Q Sbjct: 119 GQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVIDITKVGQ 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCY 207 +I+ TY+ ++IY F++L CY Sbjct: 179 QIIERTYESVLIY---GFLFLFFFIVCY 203 >gi|238787849|ref|ZP_04631646.1| Binding-protein-dependent transport system inner membrane component [Yersinia frederiksenii ATCC 33641] gi|238724192|gb|EEQ15835.1| Binding-protein-dependent transport system inner membrane component [Yersinia frederiksenii ATCC 33641] Length = 245 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 110/203 (54%), Gaps = 29/203 (14%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWI 64 L+ + L+ ++TL I+ + V + ++GF +A R D+ + + F Y + Sbjct: 10 LLAPQYLSWLWDGFLLTLWISACTVVAATLLGFLLAAAR----DSELKALQWFAIGYSTL 65 Query: 65 FRGTPLLVQLFVIFYGL--------------PHIGIVFD--------SFVAIIISLTLNF 102 FR TPLL+QLF ++ PH VF+ F+A I LTL Sbjct: 66 FRNTPLLIQLFFWYFAASQLLPTSWIPWLNTPHEITVFNLTLSWPSFEFLAGFIGLTLYS 125 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +A+I+E +RS I + KGQ A++A+GLT Q++RH++LPQ + + PL ++++I+K+ Sbjct: 126 TAFIAEELRSGISGVAKGQKYAAHALGLTGWQSMRHVVLPQALKIALPPLLGQYMNIIKN 185 Query: 163 TSVASTITIPEIFQTAQRIVSTT 185 +S+A I + E+ ++++ + T Sbjct: 186 SSLAMAIGVAELSYASRQVETET 208 >gi|326803926|ref|YP_004321744.1| putative glutamine ABC transporter, permease protein GlnP [Aerococcus urinae ACS-120-V-Col10a] gi|326651679|gb|AEA01862.1| putative glutamine ABC transporter, permease protein GlnP [Aerococcus urinae ACS-120-V-Col10a] Length = 215 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 111/200 (55%), Gaps = 8/200 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W N+ L + VTL + I+ ++SL++G F+ VIR + I+ + V Sbjct: 7 FSWVNI------SFLLEGLWVTLKVTGITILLSLLLGTFLGVIR-YLKLPFIAKGVGLVV 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 R PLL+ +F ++ LP IG+ + F A + ++T+ S ISEIIR + ++PKGQ Sbjct: 60 DTIRNLPLLLIIFFTYFALPQIGLRLNIFWAAVAAMTIFESCMISEIIRGGMNAVPKGQM 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A + G TR Q I IILPQ I + + S+ I+++K TS+A+ I++PE+ A+ I Sbjct: 120 EAGLSTGFTRGQVIILIILPQAIRSMLPSIVSQLIALIKDTSLATVISLPELTHNARIIY 179 Query: 183 STTYQPLI-IYCELAFVYLI 201 +I I+ + F+Y I Sbjct: 180 GQETSYVIPIFVAMTFLYWI 199 >gi|329943910|ref|ZP_08292179.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328531343|gb|EGF58185.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 321 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 74/219 (33%), Positives = 117/219 (53%), Gaps = 30/219 (13%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+ TL + ++ I +++ A++R S+ ++ + Y+W FRGTP+ QL +F+ Sbjct: 66 AVGWTLLLTFMAMAIGIVLAVTTAILRQS-SNPVLRWVALAYLWFFRGTPIYTQL--VFW 122 Query: 80 GLPH-------IGI-------------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 G +GI VF FVA ++ L +N AY+SEI+RS + S+ K Sbjct: 123 GALSALYQQLSLGIPFGPELLTFKTTTVFTPFVAAVLGLGINEGAYLSEIVRSGLNSVDK 182 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS--VASTITIPEIFQT 177 GQ +A+ A+G+++ Q +R I+LPQ + P +E IS+LK+TS +A T+ F T Sbjct: 183 GQSEAAGALGMSKGQILRRIVLPQAMRVIVPPTGNETISMLKTTSLVLAVPFTLDLTFVT 242 Query: 178 AQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 S TYQ PL+I A Y+I+TS + Q IE Sbjct: 243 -NSYASLTYQIIPLLIVA--AIWYIIITSILMVGQHYIE 278 >gi|15596087|ref|NP_249581.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa PAO1] gi|107100348|ref|ZP_01364266.1| hypothetical protein PaerPA_01001373 [Pseudomonas aeruginosa PACS2] gi|116048814|ref|YP_792386.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa UCBPP-PA14] gi|218893141|ref|YP_002442010.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa LESB58] gi|254239243|ref|ZP_04932566.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa C3719] gi|254245177|ref|ZP_04938499.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa 2192] gi|296390756|ref|ZP_06880231.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa PAb1] gi|313105773|ref|ZP_07792036.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa 39016] gi|9946790|gb|AAG04279.1|AE004523_7 arginine/ornithine transport protein AotM [Pseudomonas aeruginosa PAO1] gi|2668597|gb|AAC71072.1| membrane protein [Pseudomonas aeruginosa PAO1] gi|115584035|gb|ABJ10050.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa UCBPP-PA14] gi|126171174|gb|EAZ56685.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa C3719] gi|126198555|gb|EAZ62618.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa 2192] gi|218773369|emb|CAW29181.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa LESB58] gi|310878538|gb|EFQ37132.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa 39016] Length = 232 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 117/207 (56%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I DS P L + ++VTL + IS +I L++ +A++R+ +++ Y ++ Sbjct: 5 FSVIWDSLP-LYFDGLLVTLKLLSISLLIGLLLAVPLALMRVS-KQPLVNFPAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +S + ++ +N SAY +EI+ S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFDAVRESALWPWLSNASFCACLAFAINTSAYTAEILAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G++R + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPHGEIEAAKAMGMSRLKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLVDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + S Y P + YL LT Sbjct: 183 AARTVYSQYYLPFEAFITAGLFYLCLT 209 >gi|206577412|ref|YP_002239488.1| arginine ABC transporter, permease protein ArtM [Klebsiella pneumoniae 342] gi|288936336|ref|YP_003440395.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|290510608|ref|ZP_06549978.1| arginine transport system permease artM [Klebsiella sp. 1_1_55] gi|206566470|gb|ACI08246.1| arginine ABC transporter, permease protein ArtM [Klebsiella pneumoniae 342] gi|288891045|gb|ADC59363.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] gi|289777324|gb|EFD85322.1| arginine transport system permease artM [Klebsiella sp. 1_1_55] Length = 222 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 61/219 (27%), Positives = 120/219 (54%), Gaps = 14/219 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D P+LL + +L + S +++LI+ +I + ++ I+ Y+ +F GT Sbjct: 1 MLDYLPELL-KGLHTSLTLTVASIIVALILSLIFTIILTLKTPGLV-WIVRGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPSLQDYPWLWHLISEPWLCALIALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQW + A+G+++K T+ I+LP + S+E + + KSTS+A TIT+ E+ Sbjct: 119 DGQWQSCSALGMSKKDTL-AILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 Q + TY ++++ +YLI+ ++ +E Sbjct: 178 QLLYGRTYD-VMVFGAAGIIYLIVNGLLTLLMRLVERKA 215 >gi|300717677|ref|YP_003742480.1| lysine/arginine/ornithine ABC transporter permease [Erwinia billingiae Eb661] gi|299063513|emb|CAX60633.1| lysine/arginine/ornithine ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 228 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 113/225 (50%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + ++++ +VTL +A S ++S+I+G A ++ S+ + LI Y + RG P L Sbjct: 4 GYSEVIFKGALVTLELALSSVLLSVILGLIGAGAKLS-SNRALRLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G+ D VA II+L + AY +E R + +++P+G Sbjct: 63 VLMLLIFYGLQIALNQLTDALGVDQFDIDPMVAGIITLGFIYGAYFTETFRGAYMAVPRG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A G T QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 QIEAATAFGFTSSQTFRRILFPGMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T+QP +YL+ T+ + + +E + D Sbjct: 183 AGKSTWQPFYFAVVAGVIYLVFTTLSNGVLLWLERRYSVGVRRAD 227 >gi|295706522|ref|YP_003599597.1| arginine ABC transporter permease ArtQ [Bacillus megaterium DSM 319] gi|294804181|gb|ADF41247.1| arginine ABC transporter, permease protein ArtQ [Bacillus megaterium DSM 319] Length = 223 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 61/182 (33%), Positives = 107/182 (58%), Gaps = 19/182 (10%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTIISLIM 58 F+ I+ S P +L I VT+ I S ++ ++G +++ +I +F+D Sbjct: 9 FSQIVPSMPYIL-KGIGVTIQIVLASAILGFVLGVILSLCKISRNKPLQWFADA------ 61 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIIS 116 Y +FRGTPL++QL +I++GLP + + FD F A + + LN +AYISEIIR+ I++ Sbjct: 62 --YTSVFRGTPLVLQLLLIYFGLPQL-LGFDIAPFPAAVAAFGLNSAAYISEIIRAGILA 118 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + KGQ +A+ A+G+ ++ + IILPQ + L +EFI++ K +++ + I +I + Sbjct: 119 VDKGQREAALALGIPYRRMMGQIILPQALKNILPALMNEFITLTKESAIVTVIGALDIMR 178 Query: 177 TA 178 A Sbjct: 179 RA 180 >gi|257056914|ref|YP_003134746.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] gi|256586786|gb|ACU97919.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] Length = 241 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 112/211 (53%), Gaps = 11/211 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 L + +TL + + V+ L++ F+ ++ S +++ F FRGT L +Q Sbjct: 14 LVRGLGITLLVTALGTVLMLLVSVFLGLLARSSNLLSRGSARVVIEF----FRGTSLPIQ 69 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 L+ +F+ LP +GI FD + +++ LN+ AY +E++R S+ ++P+ QW+A+ A+ L+ Sbjct: 70 LWWLFFALPLLGIKFDPILVGVLAFGLNYGAYGAEVVRGSLEAVPRPQWEAAVALNLSPT 129 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q + ++ PQ I +++ FI +LKST + TI++ ++ + +IY Sbjct: 130 QRMTRVVWPQAIALMIPSMNNLFIQLLKSTPLLYTISLVDLMTMGESFHEAGGDRTLIYL 189 Query: 194 ELAFVYLIL----TSFCYIIQIKIESSVTQH 220 L +Y +L T + ++ +++ + +H Sbjct: 190 VLMAIYFVLAYAVTLLSNMAEVAVKARLGRH 220 >gi|116514276|ref|YP_813182.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093591|gb|ABJ58744.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 500 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 97/167 (58%), Gaps = 1/167 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I S I L++G A++R+ + ++ I Y+ RGTP +VQ+ +++G+ Sbjct: 301 TMIITICSITIGLVLGVIFALMRLS-KNKLLHAIAVCYIEFLRGTPQMVQIMFVYFGVGM 359 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + + A II++ LN AY++E IRS I S+ KGQ +A+ ++GL++ +T R+++ PQ Sbjct: 360 LIKNMPALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLSQTKTYRYVVFPQ 419 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + L +EFI++ K +S+ S I + E+ + + TY+ ++ Sbjct: 420 ALKNIWPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVM 466 >gi|304398229|ref|ZP_07380103.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304354095|gb|EFM18468.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 238 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 108/196 (55%), Gaps = 11/196 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + +S + + +A+ R+ + IS + + ++FRGTPL VQL V Sbjct: 20 FTGVAITLWLLILSVTVGGCLAILLAIARVS-PNRFISFPVWLFTYVFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++ TLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTELLNAFFRSGLNCTLLAFTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + T+ S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSTFKLYRCIILPSALRTALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILT 203 P + A +YLI++ Sbjct: 199 PFTAFGIAAVLYLIIS 214 >gi|260597265|ref|YP_003209836.1| arginine transporter permease subunit ArtM [Cronobacter turicensis z3032] gi|260216442|emb|CBA29555.1| Arginine transport system permease protein artM [Cronobacter turicensis z3032] Length = 222 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 121/216 (56%), Gaps = 14/216 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D P+LL + +L + S ++L++ ++ + ++ I+ Y+ +F GT Sbjct: 1 MLDYLPELL-KGLHTSLTLTAASIAVALVLSVIFTIV-LTLKTPVLVWIVRGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +++L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPSLQNYPWLWHVLSEPWLCALVALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW + A+G++RK T+ I+LP + S+E + + KSTS+A TIT+ E+ + Sbjct: 119 EGQWQSCGALGMSRKDTL-AILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYS 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Q + TY ++++ +YLI+ ++ IE Sbjct: 178 QLLYGRTYD-VMVFGAAGVIYLIVNGLLTLLMRVIE 212 >gi|258545108|ref|ZP_05705342.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Cardiobacterium hominis ATCC 15826] gi|258519627|gb|EEV88486.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Cardiobacterium hominis ATCC 15826] Length = 219 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 97/182 (53%), Gaps = 2/182 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ + + PQ + AA TL ++ +SL+ G + I + + + + Y+ + Sbjct: 3 FSYLREVLPQYV-AATWQTLQLSLWGVALSLVFGLLVC-IAVVYRLPFFAPVCRAYIELS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLLVQLF ++YGLP GI F +I LT +AY++E R I ++ + Q +A+ Sbjct: 61 RNTPLLVQLFFLYYGLPKFGIRLSGFACGVIGLTFLGAAYMAEAFRGGIAAVSRVQGEAA 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GLT Q ++I PQ++ S L + + ++K TSV + + E+ ++ ++ Sbjct: 121 LAVGLTPAQAFLYVIFPQSLAASIPALVANTLFLIKETSVVGVLAVVELLNVSKELIGLD 180 Query: 186 YQ 187 Y+ Sbjct: 181 YK 182 >gi|310814816|ref|YP_003962780.1| polar amino acid ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] gi|308753551|gb|ADO41480.1| polar amino acid ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] Length = 216 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 108/184 (58%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ ++ + I GF + + RI ++ L +V I +GTPLL+Q+F+I++GL Sbjct: 19 TIILSALAMSLGSIAGFIVMLGRISRRKWLVRL-SGTWVQIIQGTPLLIQMFIIYFGLGV 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +GI + A I+ + SAY+ EI R + SI K Q++A+ ++GLTR Q +R +ILPQ Sbjct: 78 VGISVPALAAAAIATMIYASAYLGEIWRGCVQSIAKTQFEAAESMGLTRWQALRDVILPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + P + ++K+TS+AS + E+ + AQ I ++ ++P +++ A +Y Sbjct: 138 AMRIATPPTVGFTVQLIKNTSLASVVGFLELTRAAQVINNSLFEPFLVFGIAAALYF--- 194 Query: 204 SFCY 207 + CY Sbjct: 195 AVCY 198 >gi|296314052|ref|ZP_06863993.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria polysaccharea ATCC 43768] gi|296839302|gb|EFH23240.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria polysaccharea ATCC 43768] Length = 248 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 63/183 (34%), Positives = 102/183 (55%), Gaps = 27/183 (14%) Query: 61 YVWIFRGTPLLVQLFV------IFYGLPHIGIV------------FDSFVAIIISLTLNF 102 YV +FRGTPL VQ+ + +F+ GI+ + +A ++L N Sbjct: 69 YVTLFRGTPLFVQIVIWAYVWFLFFVNSSDGILVSGEAAVELRRGYGPLIAGSLALIANS 128 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AYI EI R+ I SI KGQ +A+ ++G+T Q +R++ILPQ + PL+SEFI++LK Sbjct: 129 GAYICEIFRAGIQSIDKGQMEAARSLGMTYPQAMRYVILPQALRRMLPPLASEFITLLKD 188 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCE----LAFVYLILTSFCYIIQIKIESSVT 218 +S+ S I +PE+ Q+ ++ Y +Y E +A +YL++T+F I +++E Sbjct: 189 SSLLSVIAVPEL-SYVQKTITGRYS---VYEEPLYTVALIYLLMTTFLGWIFLRLEKRYN 244 Query: 219 -QH 220 QH Sbjct: 245 PQH 247 >gi|323528628|ref|YP_004230780.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Burkholderia sp. CCGE1001] gi|323385630|gb|ADX57720.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Burkholderia sp. CCGE1001] Length = 219 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 80/134 (59%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +S + F V R TPLL+Q++V+FY LP GI + A + + L+++ Y SE+ R+ Sbjct: 53 VSRTVGFIVEFIRSTPLLIQVYVLFYVLPVYGITMSALTAGTVGIALHYACYTSEVYRAG 112 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + + +GQW+A+ A+ L+ +T R +ILPQ I L + +++ K T V S IT+ E Sbjct: 113 LNGVARGQWEAACALSLSPWRTYRGVILPQAIRPVIPALGNYLVAMFKDTPVLSAITVVE 172 Query: 174 IFQTAQRIVSTTYQ 187 + Q A+ I S T++ Sbjct: 173 LMQQAKNIGSETFR 186 >gi|15601990|ref|NP_245062.1| arginine transporter permease subunit ArtQ [Pasteurella multocida subsp. multocida str. Pm70] gi|12720338|gb|AAK02209.1| ArtQ [Pasteurella multocida subsp. multocida str. Pm70] Length = 223 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 65/220 (29%), Positives = 120/220 (54%), Gaps = 14/220 (6%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH---FYVWIFRGTPLLV 72 L+Y A ++TL +A V SLI+G +++I + + I +V + RG P ++ Sbjct: 8 LMYTATLMTLGLA----VCSLIVGLILSIIFVVLETSKWQWIRKPTSVFVTLLRGLPEIL 63 Query: 73 QLFVIFYGLPHI-----G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 + +I++G + G I F +F + +L++ F+AY S+ +R +I +IP GQW++ Sbjct: 64 VVLLIYFGSTEVVEMLTGEFIQFSAFSCGVFALSIIFAAYASQSLRGAIQAIPLGQWESG 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL+R T II+PQ + LS++++ +LK T++ S I + ++ + A+ + + T Sbjct: 124 AALGLSRGYTFVQIIMPQVWRHALPGLSNQWLVLLKDTALVSLIGVEDLMRQAELVNTVT 183 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +QP Y A +YL +T I K+E T+ V+ Sbjct: 184 HQPFTWYGIAALLYLTITLISQFIIRKLEFRFTRFERGVE 223 >gi|325570407|ref|ZP_08146184.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] gi|325156617|gb|EGC68794.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] Length = 218 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 99/165 (60%), Gaps = 1/165 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L + VT+ ++ +S + S IIG ++R F S + S ++ + + R PLL+ + Sbjct: 13 RFLIDGLRVTVEVSILSILFSFIIGGIAGILR-FSSIPVFSKVLGVVIDVIRNLPLLLII 71 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F ++ LP IGI F+ F + +++LT+ SA +SEI R+ + ++PKGQ +A + GL+ + Sbjct: 72 FFTYFALPQIGIRFNIFWSAVVALTIFESAMLSEIFRAGLNAVPKGQMEAGLSTGLSYVE 131 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +R I++PQ + S+ IS++K TS+A I++PE+ A+ Sbjct: 132 VLRSIVVPQAFKAMLPAIVSQLISLIKDTSLAVIISLPELTHHAR 176 >gi|152969451|ref|YP_001334560.1| arginine transporter permease subunit ArtM [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|262041042|ref|ZP_06014261.1| arginine ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|150954300|gb|ABR76330.1| arginine 3rd transport system permease protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|259041600|gb|EEW42652.1| arginine ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 222 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 61/219 (27%), Positives = 120/219 (54%), Gaps = 14/219 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D P+LL + +L + S +++LI+ +I + ++ I+ Y+ +F GT Sbjct: 1 MLDYLPELL-KGLHTSLTLTVASIIVALILSLIFTIILTLKTPGLV-WIVRGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPSLQEYPWLWHLISEPWLCALIALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQW + A+G+++K T+ I+LP + S+E + + KSTS+A TIT+ E+ Sbjct: 119 DGQWQSCSALGMSKKDTL-AILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 Q + TY ++++ +YLI+ ++ +E Sbjct: 178 QLLYGRTYD-VMVFGAAGIIYLIVNGLLTLLMRLVERKA 215 >gi|90418082|ref|ZP_01225994.1| permease protein, ABC-type amino acid transporter [Aurantimonas manganoxydans SI85-9A1] gi|90337754|gb|EAS51405.1| permease protein, ABC-type amino acid transporter [Aurantimonas manganoxydans SI85-9A1] Length = 263 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 57/212 (26%), Positives = 114/212 (53%), Gaps = 12/212 (5%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + +T+ + SFV ++ +A+ R+ ++ + + +V+ FRGTPL+ Q+F+++ Sbjct: 51 SGLWITITLVVGSFVCGAVVSLPVALGRMS-ANPVARTLAFVFVYFFRGTPLIAQIFLVY 109 Query: 79 YGLPHIGIVFD----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 YG F+ ++ + SLTLN +AY +EI+R +I S+P GQW+ + ++ Sbjct: 110 YGFGQFRGAFETVGLWWFFREAWYCALFSLTLNTAAYQAEILRGAIQSVPTGQWEGARSL 169 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+ R +ILPQ + + P ++E I ++K++++ + IT+ ++F ++ S T+ Sbjct: 170 GMPRVVIFFKVILPQAMIVALRPYANEIILMIKASAIVAIITVYDLFGETRQAYSRTFD- 228 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y A +YL + IE +T+H Sbjct: 229 FQTYVWAAVLYLAIVEGLRHATNFIERRLTRH 260 >gi|283784628|ref|YP_003364493.1| arginine ABC transporter permease [Citrobacter rodentium ICC168] gi|282948082|emb|CBG87647.1| arginine ABC transporter, permease protein [Citrobacter rodentium ICC168] Length = 222 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 121/220 (55%), Gaps = 18/220 (8%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ P+LL + +L + S V++LI+ +I + ++ L+ Y+ +F GT Sbjct: 1 MLEYLPELL-KGLHTSLTLTVASIVVALILSLIFTIILTLKTPGVVWLV-RGYITLFTGT 58 Query: 69 PLLVQLFVIFYG------------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 PLLVQ+F+I+YG L H+ + + ++ +I+L+LN +AY +++ +I + Sbjct: 59 PLLVQIFLIYYGPGQFPTLQEYPVLWHL--LSEPWLCALIALSLNSAAYTTQLFYGAIRA 116 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQW + A+G+++K T+ I+LP + S+E + + KSTS+A TIT+ E+ Sbjct: 117 IPEGQWQSCGALGMSKKDTL-AILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMG 175 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 Q + TY ++++ +YLI+ ++ IE Sbjct: 176 YGQLLYGRTYD-VMVFGAAGVIYLIVNGLLTLMMRLIERK 214 >gi|228989783|ref|ZP_04149763.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus pseudomycoides DSM 12442] gi|228769930|gb|EEM18513.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus pseudomycoides DSM 12442] Length = 233 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 111/198 (56%), Gaps = 9/198 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+L ++ F + ++IV + + S I+G +AV+RI +++ YV Sbjct: 26 FDLYLEGFKYTVMSSIV--------ALIGSFILGTIMAVMRIA-PIRVLNWFGAAYVEFI 76 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R PL++ FV ++ P +G+ + F+A +LT+ +A+I+E IR+ I+S+PKGQ +A+ Sbjct: 77 RNIPLVLIAFVFYFAFPVMGVTLNGFIAGTAALTIYTAAFIAEAIRAGILSVPKGQMEAA 136 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 + GLT Q + +I+LPQ I PL ++F++++K++S+ I ++ I + T Sbjct: 137 RSSGLTYVQAMYYIVLPQAIKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTRT 196 Query: 186 YQPLIIYCELAFVYLILT 203 + +Y + YL+LT Sbjct: 197 FVTFDVYIFVGMFYLLLT 214 >gi|300768251|ref|ZP_07078156.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494315|gb|EFK29478.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 491 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 111/206 (53%), Gaps = 4/206 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD---TIISLI 57 +K N + + + I TL I S IIG +A+ R+ + T I + Sbjct: 270 LKTNTVNTSMGHYWKAFATGIEYTLIITVCSVFFGFIIGILLALARMAKGNPLKTAIRWL 329 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 YV RGTP++VQ+ +++GL + + + + II+++LN AY++E IR I S+ Sbjct: 330 ATAYVEFIRGTPMMVQVMFVYFGL-GLFVNLPALTSGIIAISLNSGAYVAEYIRGGINSV 388 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQ +A+ ++G++ +T+R+++LPQ + L +EFI+++K +S+ S I + E+ Sbjct: 389 DVGQTEAARSLGMSNGETMRYVVLPQALKNIWPSLGNEFITLIKDSSIVSIIGVTELIYQ 448 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 + + S TY+ + + +Y ILT Sbjct: 449 SNIVRSDTYRGVAPIVVIMVLYFILT 474 >gi|28378733|ref|NP_785625.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum WCFS1] gi|254556936|ref|YP_003063353.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum JDM1] gi|308180925|ref|YP_003925053.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28271570|emb|CAD64475.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum WCFS1] gi|254045863|gb|ACT62656.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum JDM1] gi|308046416|gb|ADN98959.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 507 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 105/187 (56%), Gaps = 4/187 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSD---TIISLIMHFYVWIFRGTPLLVQLFV 76 I TL I S IIG +A+ R+ + T I + YV RGTP++VQ+ Sbjct: 305 GIEYTLIITVCSVFFGFIIGILLALARMAKGNPLKTAIRWLATAYVEFIRGTPMMVQVMF 364 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GL + + + + II+++LN AY++E IR I S+ GQ +A+ ++G++ +T+ Sbjct: 365 VYFGL-GLFVNLPALTSGIIAISLNSGAYVAEYIRGGINSVDVGQTEAARSLGMSNGETM 423 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 R+++LPQ + L +EFI+++K +S+ S I + E+ + + S TY+ + + Sbjct: 424 RYVVLPQALKNIWPSLGNEFITLIKDSSIVSIIGVTELIYQSNIVRSDTYRGVAPIVVIM 483 Query: 197 FVYLILT 203 +Y ILT Sbjct: 484 VLYFILT 490 >gi|57242452|ref|ZP_00370390.1| glutamine ABC transporter, permease protein (glnP) [Campylobacter upsaliensis RM3195] gi|57016737|gb|EAL53520.1| glutamine ABC transporter, permease protein (glnP) [Campylobacter upsaliensis RM3195] Length = 233 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 20/200 (10%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I+ P + AA + TL ++ V SLIIGFF V+ FF + + Y+ Sbjct: 3 FHFILTHIPAFVEAAWL-TLKLSFWGVVFSLIIGFF-CVLMHFFKLKFMGNLCQIYIEFS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD------------------SFVAIIISLTLNFSAYIS 107 R TPLL+QLF ++Y LP +G + +F I+ L+ AY++ Sbjct: 61 RNTPLLIQLFFLYYALPKLGFHLETIFPLNLLCLSVDESLRPAFACAIVGLSFLGGAYMA 120 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E +R+ S+ K Q++A ++G + +R++ILPQ + + +S+ I ++K TSV S Sbjct: 121 EALRAGFESVKKQQFEAGLSLGFSAFGNLRYVILPQALAVAMSGISANIIFLIKETSVVS 180 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I +P++ + + S TY+ Sbjct: 181 IIALPDLVTLMKSLNSLTYK 200 >gi|312863467|ref|ZP_07723705.1| amino acid ABC transporter, permease protein [Streptococcus vestibularis F0396] gi|322516240|ref|ZP_08069172.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] gi|311101003|gb|EFQ59208.1| amino acid ABC transporter, permease protein [Streptococcus vestibularis F0396] gi|322125304|gb|EFX96669.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] Length = 226 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 101/183 (55%), Gaps = 1/183 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A +TL IA + S ++G ++VIR + ++S + Y+ + R TPLL+QLF +++ Sbjct: 16 AFFLTLHIAVLGIFGSFLLGLVVSVIR-HYRVPVLSQLSTAYIELSRNTPLLIQLFFLYF 74 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP IG+V S ++ L +Y++E RS + ++ + Q + +IGLT Q R++ Sbjct: 75 GLPRIGLVLSSEACAVVGLIFLGGSYMAESFRSGLEAVSQTQHEVGLSIGLTPFQVFRYV 134 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + + S+ I ++K TSV S + + ++ A+ ++ Y+ + L Y Sbjct: 135 VLPQAVAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYETDVALGMLVVAY 194 Query: 200 LIL 202 L++ Sbjct: 195 LLM 197 >gi|300313888|ref|YP_003777980.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300076673|gb|ADJ66072.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 217 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 103/184 (55%), Gaps = 4/184 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ ++FV+ GF + + RI + ++ +G PLL+ LF++++GL Sbjct: 20 TLVLSALAFVLGGAGGFLVMLARIS-PHAWLRRPAILFIECVQGIPLLILLFIVYFGLSV 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 G+V + VA +++ + SAY+ +I R + ++P+ QW+AS + LTR QT+R +I+PQ Sbjct: 79 YGLVLPALVAAGLAMMIYTSAYLGDIWRGCVEAMPRPQWEASECLSLTRWQTLRLVIIPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 S P + ++K TS+AS I E+ + Q I ++ +QP +++ + Y +L Sbjct: 139 ATRLSLPPTIGFLVQLIKMTSLASVIGFVELTRAGQIINNSIFQPFLVFLLVGSFYFLL- 197 Query: 204 SFCY 207 CY Sbjct: 198 --CY 199 >gi|238785202|ref|ZP_04629194.1| Histidine transport system permease protein hisM [Yersinia bercovieri ATCC 43970] gi|238713880|gb|EEQ05900.1| Histidine transport system permease protein hisM [Yersinia bercovieri ATCC 43970] Length = 216 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 108/193 (55%), Gaps = 11/193 (5%) Query: 21 IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG 80 + VTL + S V+ ++ +AV R+ I L + + +IFRGTPL VQL V + G Sbjct: 1 MAVTLWLLISSVVMGGLLAIPLAVARVA-ERRWIRLPVWIFTYIFRGTPLYVQLLVFYSG 59 Query: 81 LPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + + I+ ++F I++LTLN AY +EI +I S+P G+ +A+ A G Sbjct: 60 MYSLEIIRGNDLLNAFFRSGLNCTILALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGF 119 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 +R + R IILP + + S+E I +L ST++A T T+P+I + A+ I + TYQP Sbjct: 120 SRFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDILKIARDINAATYQPFY 179 Query: 191 IYCELAFVYLILT 203 + A +YLI++ Sbjct: 180 AFGIAAVLYLIIS 192 >gi|238763902|ref|ZP_04624859.1| Histidine transport system permease protein hisM [Yersinia kristensenii ATCC 33638] gi|238697870|gb|EEP90630.1| Histidine transport system permease protein hisM [Yersinia kristensenii ATCC 33638] Length = 216 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 108/193 (55%), Gaps = 11/193 (5%) Query: 21 IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG 80 + VTL + S V+ ++ +AV R+ I L + + +IFRGTPL VQL + + G Sbjct: 1 MAVTLWLLISSVVMGGLLAIPLAVARVA-ERRWIRLPVWIFTYIFRGTPLYVQLLIFYSG 59 Query: 81 LPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + + IV ++F I++LTLN AY +EI +I S+P G+ +A+ A G Sbjct: 60 MYSLEIVRGNDLLNAFFRSGLNCTILALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGF 119 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 +R + R IILP + + S+E I +L ST++A T T+P+I + A+ I + TYQP Sbjct: 120 SRFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDILKIARDINAATYQPFY 179 Query: 191 IYCELAFVYLILT 203 + A +YLI++ Sbjct: 180 AFGIAAVLYLIIS 192 >gi|332161055|ref|YP_004297632.1| glutamine ABC transporter permease protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604932|emb|CBY26430.1| glutamate transport membrane-spanning protein [Yersinia enterocolitica subsp. palearctica Y11] gi|325665285|gb|ADZ41929.1| glutamine ABC transporter permease protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860700|emb|CBX70993.1| glutamine transport system permease protein glnP [Yersinia enterocolitica W22703] Length = 218 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 89/141 (63%), Gaps = 1/141 (0%) Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTP++VQ+ I++ LP + + D F A ++++ +N AYI+EI R +++SI G Sbjct: 61 LIRGTPIVVQVMFIYFALPMMMPVRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHNGFR 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A A+GL+++ T+R++I P + PL +++I +K TS+ I + E+ + Q I+ Sbjct: 121 EAGLALGLSKRDTLRYVIAPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEII 180 Query: 183 STTYQPLIIYCELAFVYLILT 203 + ++ + I+ +A +YLI+T Sbjct: 181 AGNFRAMEIWSAVAVIYLIIT 201 >gi|237732154|ref|ZP_04562635.1| arginine transporter permease subunit ArtM [Citrobacter sp. 30_2] gi|226907693|gb|EEH93611.1| arginine transporter permease subunit ArtM [Citrobacter sp. 30_2] Length = 222 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 122/218 (55%), Gaps = 14/218 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ P+LL + +L + S V++L++ VI + ++ L+ Y+ +F GT Sbjct: 1 MLEYLPELL-KGLHTSLTLTVASIVVALVLALIFTVILTLKTPVLVWLV-RAYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPALQEYPVLWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW + A+G+++K T+ I+LP + S+E + + KSTS+A TIT+ E+ + Sbjct: 119 EGQWQSCGALGMSKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYS 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 Q + TY ++++ +YLI+ ++ IE Sbjct: 178 QLLYGRTYD-VMVFGAAGVIYLIVNGLLTLMMRLIERK 214 >gi|220905022|ref|YP_002480334.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869321|gb|ACL49656.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 230 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 62/220 (28%), Positives = 113/220 (51%), Gaps = 2/220 (0%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +++ + P +L A +VT+ IS + L++G +AV +++ + L+ YVW F Sbjct: 4 LSVVYHALPSML-AGCIVTVGNVTISLAMGLVLGVPMAVAQVYGGPWLRRLVA-VYVWFF 61 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG P+LV LF+ + +G+ D F+ + L +AY S+I R +I S+P+GQ +A+ Sbjct: 62 RGVPILVLLFLCYGLFISLGLPADPFLICCLVLGCTSTAYQSQIFRGAIESLPQGQLNAA 121 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G+ I IILPQ + S ++EF +LK +++ + +I + + T Sbjct: 122 RALGMGEGTGICSIILPQAMRLSIPGWANEFSILLKDSAICYVLGTQDIMARTSFVAART 181 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 ++ L +Y +Y +LT + ++E V YS Sbjct: 182 HEHLALYAAAGCIYFLLTLAVLKLLRRLEKRVHVPGYSTG 221 >gi|309777758|ref|ZP_07672707.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Erysipelotrichaceae bacterium 3_1_53] gi|308914524|gb|EFP60315.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Erysipelotrichaceae bacterium 3_1_53] Length = 256 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 56/140 (40%), Positives = 87/140 (62%), Gaps = 9/140 (6%) Query: 44 VIRIFFSDT----IISLIMH----FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII 95 +RI D+ II I+H YVWIFRGTP++VQ +I++GL I + + A I Sbjct: 56 AVRIEERDSAVSRIIKRILHGFVGLYVWIFRGTPMMVQALIIYHGLRPI-LNWSPVTAGI 114 Query: 96 ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSE 155 +++N AY++EIIR+ I SI KGQ +A+ ++G+T QT+ IILPQ I S + +E Sbjct: 115 TIISINTGAYMAEIIRAGIQSIDKGQNEAARSLGMTSTQTMMSIILPQAIRNSFPSIGNE 174 Query: 156 FISILKSTSVASTITIPEIF 175 FI +K +S+ + I + E++ Sbjct: 175 FIVNIKDSSMLNVIGVIELY 194 >gi|293401053|ref|ZP_06645198.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306079|gb|EFE47323.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 255 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 52/128 (40%), Positives = 83/128 (64%), Gaps = 7/128 (5%) Query: 53 IISLIMH----FYVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYIS 107 I+ I+H YVW FRGTP++VQ ++Y L P++G + + VA ++ +++N AY+S Sbjct: 68 IVKRILHSIVAVYVWFFRGTPMMVQAMFLYYALRPYLG--WSANVAGVVIISVNTGAYMS 125 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 EIIR+ I SI KGQ +A+ ++G+T QT+ I+LPQ I S L +E I +K +S+ + Sbjct: 126 EIIRAGIQSIDKGQIEAARSLGMTNTQTMTAIVLPQAIRNSFPSLGNELIVNIKDSSMLN 185 Query: 168 TITIPEIF 175 I + E+F Sbjct: 186 VIGVMELF 193 >gi|271500709|ref|YP_003333734.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270344264|gb|ACZ77029.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 246 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 52/147 (35%), Positives = 86/147 (58%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 H YV R TP+L+Q+F+IF+GLP +GI + A I++L +N AY+SE R+ I S+P Sbjct: 56 HGYVEFIRNTPVLLQIFIIFFGLPSLGITMSATTAGILALGINVGAYLSETFRAGIQSVP 115 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A++ +G+ R ++LPQ + + I +L TS+ S I +PE+ TA Sbjct: 116 KGQLEAAWILGIPRWHIFLSVVLPQATRAVWPAIINNLIQLLLGTSLLSAIALPELTGTA 175 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSF 205 I + T + + + +YL+L++ Sbjct: 176 TVINARTLLYIQTFSIVTVIYLLLSNL 202 >gi|330501279|ref|YP_004378148.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas mendocina NK-01] gi|328915565|gb|AEB56396.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina NK-01] Length = 221 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 100/187 (53%), Gaps = 1/187 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y++ + LL TL + I ++ + +G A++R + I Sbjct: 1 MAYQFDFAAVLQHSDLLLQGAAFTLGLTAIGTLLGVGLGIVGAILRAW-RIRPFDRIFGV 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TP +VQLF IF+GLP +G+ + A I+++ +N AY +EIIR+ I +IP G Sbjct: 60 YVELIRNTPFIVQLFFIFFGLPSLGVRLSEWEAAILAMVINLGAYSTEIIRAGIQAIPHG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+ ++R +T RH++L + LSS+ I ++ ++V S I+ E+ A Sbjct: 120 QLEAASALAMSRFETFRHVVLRPALGKVWPALSSQIIIVMLGSAVCSQISTEELSFAANF 179 Query: 181 IVSTTYQ 187 I S ++ Sbjct: 180 IQSRNFR 186 >gi|328555067|gb|AEB25559.1| YtmL [Bacillus amyloliquefaciens TA208] gi|328913424|gb|AEB65020.1| polar amino acid transport system permease protein [Bacillus amyloliquefaciens LL3] Length = 240 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 52/154 (33%), Positives = 89/154 (57%), Gaps = 7/154 (4%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI----GI---VFDSFVAIIISLTLNFSAY 105 +++ + Y+ FRGTP++VQLF++FYG+P + GI D A I + L+ +A Sbjct: 52 VLNPLAKLYISFFRGTPIMVQLFIVFYGIPALTALGGIDTSKMDPLYAAIATYALSSAAR 111 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 +EIIR + S+ GQ +A+ +IGL QT R IILPQ + + + + I LK TS+ Sbjct: 112 AAEIIRGGVNSVDAGQTEAALSIGLNGGQTFRRIILPQALLQAFPNIGNMVIGFLKDTSL 171 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 A +I + ++ Q +++++ L +Y L+ +Y Sbjct: 172 AFSIGVMDMSGRGQTLITSSNHSLEVYISLSVLY 205 >gi|294501175|ref|YP_003564875.1| arginine ABC transporter permease ArtQ [Bacillus megaterium QM B1551] gi|294351112|gb|ADE71441.1| arginine ABC transporter, permease protein ArtQ [Bacillus megaterium QM B1551] Length = 219 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 61/182 (33%), Positives = 107/182 (58%), Gaps = 19/182 (10%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTIISLIM 58 F+ I+ S P +L I VT+ I S ++ ++G +++ +I +F+D Sbjct: 5 FSQIVPSMPYIL-KGIGVTIQIVLASAILGFVLGVILSLCKISRNKPLQWFADA------ 57 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIIS 116 Y +FRGTPL++QL +I++GLP + + FD F A + + LN +AYISEIIR+ I++ Sbjct: 58 --YTSVFRGTPLVLQLLLIYFGLPQL-LGFDIAPFPAAVAAFGLNSAAYISEIIRAGILA 114 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + KGQ +A+ A+G+ ++ + IILPQ + L +EFI++ K +++ + I +I + Sbjct: 115 VDKGQREAALALGIPYRRMMGQIILPQALKNILPALMNEFITLTKESAIVTVIGALDIMR 174 Query: 177 TA 178 A Sbjct: 175 RA 176 >gi|239909116|ref|YP_002955858.1| amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239798983|dbj|BAH77972.1| amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 247 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 119/212 (56%), Gaps = 12/212 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++++ ++ + Q + + + VTL I+ IS V+SL +G IAV+R+ ++ F Sbjct: 18 QFDFGQVVSGEYGQWILSGLGVTLQISGISIVLSLALGTVIAVLRLSKVKPLVWFAASF- 76 Query: 62 VWIFRGTPLLVQLFVIFYG----LPHI------GIVFDSFVAIIISLTLNFSAYISEIIR 111 FR TPLLVQ+F ++G LP F+ F +I+LT+ +A+I+E IR Sbjct: 77 TEFFRNTPLLVQIFFWYFGSYSVLPEAVNQWLYARDFE-FACGVIALTVYTAAFIAEEIR 135 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S I SIPK Q +AS A GL+ Q + ++ILPQ PL S+F++++K++S+ TI + Sbjct: 136 SGIFSIPKNQLEASRACGLSFLQAMAYVILPQAFRVIIPPLISQFLNLIKNSSLVMTIGV 195 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ A++I + T+ + +YL ++ Sbjct: 196 MDLTYMARQIEAHTFHGFEAFTVSTLIYLTIS 227 >gi|238761028|ref|ZP_04622005.1| Glutamine transport system permease protein glnP [Yersinia kristensenii ATCC 33638] gi|238761281|ref|ZP_04622257.1| Glutamine transport system permease protein glnP [Yersinia kristensenii ATCC 33638] gi|238700255|gb|EEP92996.1| Glutamine transport system permease protein glnP [Yersinia kristensenii ATCC 33638] gi|238700508|gb|EEP93248.1| Glutamine transport system permease protein glnP [Yersinia kristensenii ATCC 33638] Length = 189 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 91/144 (63%), Gaps = 1/144 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 ++ + RGTP++VQ+ I++ LP + + D F A ++++ +N AYI+EI R +++SI Sbjct: 29 FIELIRGTPIVVQVMFIYFALPMMMPVRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHN 88 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G +A A+GL+++ T+R++I P + PL +++I +K TS+ I + E+ + Q Sbjct: 89 GFREAGLALGLSKRDTLRYVIAPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQ 148 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I++ ++ + I+ +A +YLI+T Sbjct: 149 EIIAGNFRAMEIWSAVAVIYLIIT 172 >gi|190894983|ref|YP_001985276.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700644|gb|ACE94726.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 222 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 58/196 (29%), Positives = 106/196 (54%), Gaps = 2/196 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I+ F L + +T+ + I V+ +GF + + R + + I YV FRGT Sbjct: 8 ILLRFENALLLGLWMTIKLTIICVVLGCSLGFLVGLARAS-RNLALRAIAGTYVEFFRGT 66 Query: 69 PLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 P+L+QLF IF+ LP I G+ + + +I+LTL A SE R+S+ SI + Q DA A Sbjct: 67 PVLIQLFWIFFCLPLILGVELSNLASGVITLTLYMGAITSETFRASLKSIGREQLDACVA 126 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL ++ + +++LPQ + + L S +S+ K +++ S + + ++ Q I + T + Sbjct: 127 LGLPQRVQVVNVVLPQAVPRAIPTLLSNCVSLFKESALVSAVGMADLMFVGQNISNNTAR 186 Query: 188 PLIIYCELAFVYLILT 203 P+ + +A +Y ++ Sbjct: 187 PVEVLTVVALIYFVIA 202 >gi|319780067|ref|YP_004139543.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317165955|gb|ADV09493.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 269 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 98/173 (56%), Gaps = 19/173 (10%) Query: 64 IFRGTPLLVQLFVIFYGL----PHIGIVFDSFVAI---------IISLTLNFSAYISEII 110 + RGTPLL+QL++++YGL P + +S++ +++LTL+F+ Y E++ Sbjct: 98 VIRGTPLLIQLWLLYYGLGSLFPQYPWIRESWMWPYLRQAWPYGVLALTLSFAGYEGEVM 157 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R + +PKGQ +A+ A G++R + R I LPQ I + L+ E + LKST + +TI+ Sbjct: 158 RGAFAGVPKGQLEAARAFGMSRWKAFRRIWLPQAIYRALPTLTGETVLQLKSTPLVATIS 217 Query: 171 IPEIFQTAQRIVST---TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + +IF + ++ TY+PL++ LA +Y+ +T +IE+ + Sbjct: 218 VIDIFAVSSKVRQDTYLTYEPLLL---LALIYMTITGILVFAFSRIEARIPNK 267 >gi|258406150|ref|YP_003198892.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] gi|257798377|gb|ACV69314.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] Length = 598 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 63/194 (32%), Positives = 107/194 (55%), Gaps = 3/194 (1%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIG 85 +A I+ IS IG + + R+ + I+ L Y+ + RG PL++ +F +++ LP I Sbjct: 398 MAVIAISISFFIGLIVGLGRMS-KNRILRLPCMVYIEVIRGNPLIIVIFWVYFFLPIFIK 456 Query: 86 IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTI 145 + F + I+LT+ AYI+EI+R I +IP GQ++A+Y GL T+RHI+LPQ + Sbjct: 457 TYLNVFWSATIALTIFTGAYIAEIVRGGIQNIPPGQFEAAYGTGLGYWSTMRHIVLPQAL 516 Query: 146 TTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY-QPLIIYCELAFVYLILTS 204 + +FI+I K TS+A I + E+ AQ + + P IY +A +Y I Sbjct: 517 KQMIPAIVGQFIAIFKDTSLAFVIGVLELTFVAQGLNNRLMIYPFEIYTSVAALYFICCY 576 Query: 205 FCYIIQIKIESSVT 218 ++ ++E+ +T Sbjct: 577 SMSLMARRLENKLT 590 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 61/174 (35%), Positives = 98/174 (56%), Gaps = 10/174 (5%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ I+ IS I+L +G + R+ S L +YV FR TPLLVQLF ++ LP Sbjct: 65 VTIIISLISAGIALGLGTVFGLGRLS-SFKPFYLFSTWYVEFFRNTPLLVQLFFWYFALP 123 Query: 83 HI------GIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 VF F + + L + S++++E+IR+ + SIPKG +A+Y+ GLT Sbjct: 124 KALPEAARNFVFSLDYEFWSATLGLAIYTSSFMAEVIRAGVQSIPKGLLEAAYSSGLTYF 183 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 Q +R +ILP PL SEF++ +K++S+A + + E+ +Q+I S T++ Sbjct: 184 QALRTVILPLAFRAIIPPLGSEFLNNMKNSSLAMVVGVAELTWQSQQIESLTFR 237 >gi|239931078|ref|ZP_04688031.1| amino acid ABC transporter transmembrane protein [Streptomyces ghanaensis ATCC 14672] gi|291439448|ref|ZP_06578838.1| amino acid ABC transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291342343|gb|EFE69299.1| amino acid ABC transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 216 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 102/190 (53%), Gaps = 9/190 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI---ISLI 57 MK++W + ++D P + ++VTL I + +IS ++G A++ + + + + Sbjct: 1 MKWDW-SAVVDFMPYF-WDGLLVTLQILVLGSLISFVLGLVWALLMRVPTRWVTWPVGAV 58 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 F R TPLLVQLF +FY LP GI F + + ++ L++S Y ++ R+ I ++ Sbjct: 59 TEF----VRNTPLLVQLFFLFYVLPEWGITFSALTTGVFAIGLHYSTYTMQVYRAGIEAV 114 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQW+A+ A+ L ++T +ILPQ + L + IS+LK T + IT+ E+ Sbjct: 115 PVGQWEAATALNLPPRRTWTVVILPQAVRRVVPALGNYVISMLKDTPLLMAITVLEMLGE 174 Query: 178 AQRIVSTTYQ 187 A+ +Q Sbjct: 175 ARLFSQQNFQ 184 >gi|119946456|ref|YP_944136.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] gi|119865060|gb|ABM04537.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] Length = 224 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 89/152 (58%), Gaps = 9/152 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIR 111 +++ FRGTPLLVQLF+I+YG ++ ++++ +++ TLN AY +EIIR Sbjct: 56 FMYFFRGTPLLVQLFLIYYGAAQFDLIHETWLWHYFQEAWFCALLAFTLNTGAYTAEIIR 115 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I ++PK + +A+ A G++ +Q +R I LP ++ + S+E I ++ +++A +TI Sbjct: 116 GVISTMPKSELEAAKAYGMSERQILRRITLPNSLRRALPAYSNEIIFMIHGSAIAGIVTI 175 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +I A+ + + Y P Y A +Y+ LT Sbjct: 176 VDITGAARVVNARYYAPFEAYFGAALLYMCLT 207 >gi|330718492|ref|ZP_08313092.1| ABC-type amino acid transport system, permease component [Leuconostoc fallax KCTC 3537] Length = 220 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 61/172 (35%), Positives = 98/172 (56%), Gaps = 8/172 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMHFYVWIFRG 67 D+ LL + +T+ ++ +S V+S +IG + VIR I + + LI+ I R Sbjct: 14 DNLKYLL-GGLGITILVSVVSIVLSFVIGSILGVIRYEKIPYFSRFVGLIID----IVRN 68 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PLL+ +F ++ LP G+ + II++T S ++EIIR + SI GQ + + + Sbjct: 69 LPLLLIIFFTYFALPRFGVHLSILTSAIIAMTAFESMMVAEIIRGGLKSIDFGQTEGARS 128 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G++ QT+ HIILPQ T PL S+FIS++K TS+A+ I +PE+ AQ Sbjct: 129 TGMSNAQTMWHIILPQAYKTMIPPLISQFISLVKDTSLATAIVLPELMYRAQ 180 >gi|296271868|ref|YP_003654499.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter nitrofigilis DSM 7299] gi|296096043|gb|ADG91993.1| polar amino acid ABC transporter, inner membrane subunit [Arcobacter nitrofigilis DSM 7299] Length = 219 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 64/189 (33%), Positives = 109/189 (57%), Gaps = 3/189 (1%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVI-RIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 LL+ ++ T+ I I ++++ G + I RI + I LI Y+ +FRGTPLLVQ+ Sbjct: 12 LLFKGLLFTIYICSIGIFLAILGGLILYRINRI--NLLITRLIYSIYLTVFRGTPLLVQV 69 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 ++++YG P IG+ + I+ L+L +AY +EI RS SIPKG +A+Y +G +R+Q Sbjct: 70 YLVYYGGPFIGLELTAEQVGILGLSLYGAAYFAEIFRSGFESIPKGHIEAAYDLGYSRQQ 129 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 +R+I LP+ + P + I ++K +++ S IT+ E+ A + + T+ + Y Sbjct: 130 ILRYIQLPEMLGLILPPSINLTIILIKESAILSIITVSELTTAAVTMGTETFSMVEPYVF 189 Query: 195 LAFVYLILT 203 LA Y +T Sbjct: 190 LALSYWCIT 198 >gi|197105460|ref|YP_002130837.1| cystine ABC tranporter, permease protein [Phenylobacterium zucineum HLK1] gi|196478880|gb|ACG78408.1| cystine ABC tranporter, permease protein [Phenylobacterium zucineum HLK1] Length = 217 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 48/142 (33%), Positives = 86/142 (60%) Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V + RG P++VQLF +++ LP G+ D+ A II L + +S Y +E R+ I S+ Sbjct: 59 VVVLRGIPIIVQLFYVYFVLPEFGLSLDAMWAGIIGLGVAYSVYQAENFRAGIQSVDPAL 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++G++ +R +ILP I T+ P + I +LK +S+ASTIT+ E+ + Q + Sbjct: 119 VEAARSLGMSEGMIMRRVILPLAIRTALPPFGNTSIMLLKDSSIASTITVAELTRAGQLL 178 Query: 182 VSTTYQPLIIYCELAFVYLILT 203 +T+Q + +Y +A +YL ++ Sbjct: 179 AISTFQNMTVYTLIALLYLAMS 200 >gi|241205167|ref|YP_002976263.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859057|gb|ACS56724.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 219 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 58/176 (32%), Positives = 93/176 (52%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L A + VT+ + S ++ GF +A++R F I L + I P L LF+ Sbjct: 14 LVAGLGVTVFVTVASLALAAAFGFLLALLRQFSGIKFIDLAIDACCEILCNVPALTHLFI 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GL +G+ S A I+ L L +A I R+ ++P GQ +A+ A GLT QTI Sbjct: 74 LYFGLASLGVKLTSITAAILGLGLIGAAITCAIFRAGFAALPGGQAEAALAAGLTPLQTI 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 I+ PQ + + L + + +LK TSV S I PEI A+ +V++++Q +IY Sbjct: 134 FEILTPQAMRIALPGLGNYAVQLLKDTSVVSAIAAPEIMFFARSMVTSSFQTTMIY 189 >gi|322369616|ref|ZP_08044180.1| ABC-type transport system permease protein (probable substrate glutamine) [Haladaptatus paucihalophilus DX253] gi|320550786|gb|EFW92436.1| ABC-type transport system permease protein (probable substrate glutamine) [Haladaptatus paucihalophilus DX253] Length = 272 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 86/149 (57%), Gaps = 9/149 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISI 117 YV FRGTPLL QLFV++ GLP GI S + A II L+LN +AY E I+ I SI Sbjct: 107 YVEFFRGTPLLFQLFVLYIGLPRFGIGNFSRWGWYAGIIGLSLNHAAYSGEAIKGGINSI 166 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +A+ ++G++ +R IILPQ S + ++ I ++K TS+ S I + E+ Sbjct: 167 PDGQMEAARSLGMSYISAMRKIILPQAFRNSLAAVGNDQIILVKDTSLLSVIAVSELISL 226 Query: 178 AQRIVSTTYQ---PLIIYCELAFVYLILT 203 + + S + PL++ +A YL +T Sbjct: 227 FRNVNSNQFDAWTPLVL---VAIAYLAIT 252 >gi|188534298|ref|YP_001908095.1| arginine transporter permease subunit ArtM [Erwinia tasmaniensis Et1/99] gi|188029340|emb|CAO97217.1| Arginine transport system permease protein [Erwinia tasmaniensis Et1/99] Length = 222 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 98/172 (56%), Gaps = 12/172 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYG---LPHI-------GIVFDSFVAIIISLTLNF 102 ++SL+ Y+ +F GTPLLVQ+F+I+YG P I G++ ++ +++L+LN Sbjct: 43 VLSLLTRGYITLFTGTPLLVQIFLIYYGPGQFPAIQSIPWLWGLLSQPWLCALLALSLNS 102 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY + + ++ +IP GQW A A+G+ RK+ +R I+LP + + S+E + + KS Sbjct: 103 AAYTTLLFHGAVRAIPSGQWQACAALGMGRKEQLR-ILLPYALKRALSSYSNEVVLVFKS 161 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+A TIT+ E+ Q + TY + ++ +YL + ++ +E Sbjct: 162 TSLAYTITLMEVMGHGQLLYGRTYD-ISVFAAAGVIYLCVNGLLTLLMRLVE 212 >gi|22125504|ref|NP_668927.1| histidine transport system permease HisM [Yersinia pestis KIM 10] gi|45442177|ref|NP_993716.1| histidine transport system permease HisM [Yersinia pestis biovar Microtus str. 91001] gi|51596927|ref|YP_071118.1| ABC histidine transporter, permease subunit HisM [Yersinia pseudotuberculosis IP 32953] gi|108808061|ref|YP_651977.1| histidine transport system permease HisM [Yersinia pestis Antiqua] gi|108812333|ref|YP_648100.1| histidine transport system permease protein HisM [Yersinia pestis Nepal516] gi|145599263|ref|YP_001163339.1| histidine transport system permease protein HisM [Yersinia pestis Pestoides F] gi|149365250|ref|ZP_01887285.1| histidine transport system permease protein HisM [Yersinia pestis CA88-4125] gi|153949106|ref|YP_001400409.1| histidine ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|165925351|ref|ZP_02221183.1| histidine ABC transporter, permease protein HisM [Yersinia pestis biovar Orientalis str. F1991016] gi|165937059|ref|ZP_02225624.1| histidine ABC transporter, permease protein HisM [Yersinia pestis biovar Orientalis str. IP275] gi|166008599|ref|ZP_02229497.1| histidine ABC transporter, permease protein HisM [Yersinia pestis biovar Antiqua str. E1979001] gi|166214207|ref|ZP_02240242.1| histidine ABC transporter, permease protein HisM [Yersinia pestis biovar Antiqua str. B42003004] gi|167398635|ref|ZP_02304159.1| histidine ABC transporter, permease protein HisM [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421140|ref|ZP_02312893.1| histidine ABC transporter, permease protein HisM [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424656|ref|ZP_02316409.1| histidine ABC transporter, permease protein HisM [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469029|ref|ZP_02333733.1| histidine ABC transporter, permease protein HisM [Yersinia pestis FV-1] gi|170023781|ref|YP_001720286.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186896007|ref|YP_001873119.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|218929848|ref|YP_002347723.1| histidine transport system permease HisM [Yersinia pestis CO92] gi|229838348|ref|ZP_04458507.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895378|ref|ZP_04510551.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|229898914|ref|ZP_04514059.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229902686|ref|ZP_04517803.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|270490137|ref|ZP_06207211.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294504639|ref|YP_003568701.1| histidine transport system permease protein HisM [Yersinia pestis Z176003] gi|21958401|gb|AAM85178.1|AE013764_2 histidine ABC transporter, inner membrane permease [Yersinia pestis KIM 10] gi|45437041|gb|AAS62593.1| histidine transport system permease protein HisM [Yersinia pestis biovar Microtus str. 91001] gi|51590209|emb|CAH21846.1| ABC histidine transporter, permease subunit HisM [Yersinia pseudotuberculosis IP 32953] gi|108775981|gb|ABG18500.1| histidine transport system permease protein HisM [Yersinia pestis Nepal516] gi|108779974|gb|ABG14032.1| histidine transport system permease protein HisM [Yersinia pestis Antiqua] gi|115348459|emb|CAL21395.1| histidine transport system permease protein HisM [Yersinia pestis CO92] gi|145210959|gb|ABP40366.1| histidine transport system permease protein HisM [Yersinia pestis Pestoides F] gi|149291663|gb|EDM41737.1| histidine transport system permease protein HisM [Yersinia pestis CA88-4125] gi|152960601|gb|ABS48062.1| histidine ABC transporter, permease protein HisM [Yersinia pseudotuberculosis IP 31758] gi|165914922|gb|EDR33534.1| histidine ABC transporter, permease protein HisM [Yersinia pestis biovar Orientalis str. IP275] gi|165922958|gb|EDR40109.1| histidine ABC transporter, permease protein HisM [Yersinia pestis biovar Orientalis str. F1991016] gi|165992981|gb|EDR45282.1| histidine ABC transporter, permease protein HisM [Yersinia pestis biovar Antiqua str. E1979001] gi|166204563|gb|EDR49043.1| histidine ABC transporter, permease protein HisM [Yersinia pestis biovar Antiqua str. B42003004] gi|166960629|gb|EDR56650.1| histidine ABC transporter, permease protein HisM [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051139|gb|EDR62547.1| histidine ABC transporter, permease protein HisM [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056538|gb|EDR66307.1| histidine ABC transporter, permease protein HisM [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750315|gb|ACA67833.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186699033|gb|ACC89662.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|229680133|gb|EEO76232.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|229688462|gb|EEO80533.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229694714|gb|EEO84761.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701686|gb|EEO89712.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|262362700|gb|ACY59421.1| histidine transport system permease protein HisM [Yersinia pestis D106004] gi|262366627|gb|ACY63184.1| histidine transport system permease protein HisM [Yersinia pestis D182038] gi|270338641|gb|EFA49418.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294355098|gb|ADE65439.1| histidine transport system permease protein HisM [Yersinia pestis Z176003] gi|320014578|gb|ADV98149.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 238 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 11/193 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + VTL + S V+ ++ +AV R+ I L + + +IFRGTPL VQL V Sbjct: 20 FTGMAVTLWLLISSVVMGGLLALPLAVARVS-ERRWIRLPVWIFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + I+ ++F I++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYSLEIIRGNDLLNAFFRSGLNCTILALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G +R + R IILP + S S+E I +L ST++A T T+P+I + A+ I + TYQ Sbjct: 139 YGFSRFKLYRCIILPAALRISLPAYSNEVILMLHSTALAFTATVPDILKIARDINAATYQ 198 Query: 188 PLIIYCELAFVYL 200 P + A +YL Sbjct: 199 PFYAFSIAAVLYL 211 >gi|255321555|ref|ZP_05362713.1| ABC transporter membrane-spanning permease - glutamine transport [Campylobacter showae RM3277] gi|255301411|gb|EET80670.1| ABC transporter membrane-spanning permease - glutamine transport [Campylobacter showae RM3277] Length = 217 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 103/186 (55%), Gaps = 5/186 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +E+ I F + A + T+ ++ ++SL+IG F +++ F+ I+ I++ Sbjct: 1 MDFEF----IKEFTPMFVKAGIFTVKLSLYGILLSLVIGIFCTLVK-FYKVKILMPIVNG 55 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLL+QLF ++YGL G+ +F + L +Y++E R ++ K Sbjct: 56 YIEVSRNTPLLIQLFFLYYGLSKFGLNLSAFTCAVAGLAFLGGSYMAESFRLGFEAVKKT 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++ LT+ Q +R++ILPQ + S +++ I ++K TSV S I +P++ + Sbjct: 116 QIEAALSVALTQGQILRYVILPQAFSVSIPSIAANVIFLIKETSVISIIALPDLVYATKD 175 Query: 181 IVSTTY 186 I+ Y Sbjct: 176 IIGLYY 181 >gi|53720531|ref|YP_109517.1| glutamate/aspartate transport system permease [Burkholderia pseudomallei K96243] gi|67643523|ref|ZP_00442268.1| glutamate/aspartate transport system permease protein GltJ [Burkholderia mallei GB8 horse 4] gi|76811358|ref|YP_334804.1| glutamate/aspartate transport system permease [Burkholderia pseudomallei 1710b] gi|121598614|ref|YP_991700.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei SAVP1] gi|124386224|ref|YP_001027195.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei NCTC 10229] gi|126439941|ref|YP_001060406.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 668] gi|126449942|ref|YP_001082147.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei NCTC 10247] gi|126454005|ref|YP_001067667.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 1106a] gi|166998512|ref|ZP_02264370.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei PRL-20] gi|167721208|ref|ZP_02404444.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei DM98] gi|167740180|ref|ZP_02412954.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 14] gi|167817395|ref|ZP_02449075.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 91] gi|167825801|ref|ZP_02457272.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 9] gi|167847285|ref|ZP_02472793.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei B7210] gi|167895873|ref|ZP_02483275.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 7894] gi|167912522|ref|ZP_02499613.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 112] gi|167920473|ref|ZP_02507564.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei BCC215] gi|217420960|ref|ZP_03452465.1| polar amino acid ABC transporter, permease protein, PAAT family [Burkholderia pseudomallei 576] gi|226196826|ref|ZP_03792405.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei Pakistan 9] gi|237813797|ref|YP_002898248.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei MSHR346] gi|242316198|ref|ZP_04815214.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 1106b] gi|254178933|ref|ZP_04885587.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei ATCC 10399] gi|254180662|ref|ZP_04887260.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 1655] gi|254190905|ref|ZP_04897411.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei Pasteur 52237] gi|254199044|ref|ZP_04905459.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei S13] gi|254202700|ref|ZP_04909063.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei FMH] gi|254208040|ref|ZP_04914390.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei JHU] gi|254261249|ref|ZP_04952303.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 1710a] gi|254299253|ref|ZP_04966703.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 406e] gi|52210945|emb|CAH36933.1| glutamate/aspartate transport system permease protein [Burkholderia pseudomallei K96243] gi|76580811|gb|ABA50286.1| glutamate/aspartate transport system permease protein [Burkholderia pseudomallei 1710b] gi|121227424|gb|ABM49942.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei SAVP1] gi|124294244|gb|ABN03513.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei NCTC 10229] gi|126219434|gb|ABN82940.1| polar amino acid ABC transporter, permease protein, PAAT family [Burkholderia pseudomallei 668] gi|126227647|gb|ABN91187.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 1106a] gi|126242812|gb|ABO05905.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei NCTC 10247] gi|147746947|gb|EDK54024.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei FMH] gi|147751934|gb|EDK59001.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei JHU] gi|157809165|gb|EDO86335.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 406e] gi|157938579|gb|EDO94249.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei Pasteur 52237] gi|160694847|gb|EDP84855.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei ATCC 10399] gi|169656874|gb|EDS88271.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei S13] gi|184211201|gb|EDU08244.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 1655] gi|217396372|gb|EEC36389.1| polar amino acid ABC transporter, permease protein, PAAT family [Burkholderia pseudomallei 576] gi|225931086|gb|EEH27094.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei Pakistan 9] gi|237506385|gb|ACQ98703.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei MSHR346] gi|238524886|gb|EEP88316.1| glutamate/aspartate transport system permease protein GltJ [Burkholderia mallei GB8 horse 4] gi|242139437|gb|EES25839.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 1106b] gi|243065197|gb|EES47383.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei PRL-20] gi|254219938|gb|EET09322.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 1710a] Length = 246 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 109/201 (54%), Gaps = 17/201 (8%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ +++VI+L++G V+R + +S I YV IFR PL+VQ FV Sbjct: 26 LMSGFWVTVKVSLVAWVIALVVGSLFGVLRTV-PNKWLSAIGTVYVSIFRNIPLIVQFFV 84 Query: 77 IFYGLPHI--------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + +P + G F F A I+ L L A + E +RS I ++PKGQ Sbjct: 85 WYLVVPELLPVSIGTWIKQLPPGTQF--FTASIVCLGLFTGARVCEQVRSGINALPKGQR 142 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 143 AAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLV 202 Query: 183 STTYQPLIIYCELAFVYLILT 203 T Q + + Y+++ Sbjct: 203 DYTAQTYESFIAVTLAYVVIN 223 >gi|269139578|ref|YP_003296279.1| arginine transporter permease subunit [Edwardsiella tarda EIB202] gi|267985239|gb|ACY85068.1| arginine transporter permease subunit [Edwardsiella tarda EIB202] gi|304559466|gb|ADM42130.1| Arginine ABC transporter, permease protein ArtM [Edwardsiella tarda FL6-60] Length = 222 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 99/172 (57%), Gaps = 12/172 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNF 102 I++ ++ Y+ +F GTPLLVQ+F+I+YG + D+ ++ +++L LN Sbjct: 43 ILTPLVQGYITLFTGTPLLVQIFLIYYGPGQFAWIRDTPWLWSALSQPWLCAMLALALNS 102 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +++ ++ +IP GQW + A+G+++ QT+R I+LP + S+E + I KS Sbjct: 103 AAYSTQLFYGAMRAIPNGQWQSCAALGMSKAQTLR-ILLPYAFKRALSSYSNEVVLIFKS 161 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+A TIT+ E+ AQ++ TY ++++ VYL + ++ IE Sbjct: 162 TSLAYTITLMEVMGYAQQLYGRTYD-VMVFGAAGLVYLCVNGLLTLMMRMIE 212 >gi|134280169|ref|ZP_01766880.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 305] gi|134248176|gb|EBA48259.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 305] Length = 246 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 109/201 (54%), Gaps = 17/201 (8%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ +++VI+L++G V+R + +S I YV IFR PL+VQ FV Sbjct: 26 LMSGFWVTVKVSLVAWVIALVVGSLFGVLRTV-PNKWLSAIGTVYVSIFRNIPLIVQFFV 84 Query: 77 IFYGLPHI--------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + +P + G F F A I+ L L A + E +RS I ++PKGQ Sbjct: 85 WYLVVPELLPVSIGTWIKQMPPGTQF--FTASIVCLGLFTGARVCEQVRSGINALPKGQR 142 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 143 AAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLV 202 Query: 183 STTYQPLIIYCELAFVYLILT 203 T Q + + Y+++ Sbjct: 203 DYTAQTYESFIAVTLAYVVIN 223 >gi|92114901|ref|YP_574829.1| amino acid ABC transporter permease [Chromohalobacter salexigens DSM 3043] gi|91797991|gb|ABE60130.1| amino acid ABC transporter membrane protein 2, PAAT family [Chromohalobacter salexigens DSM 3043] Length = 243 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 102/182 (56%), Gaps = 12/182 (6%) Query: 34 ISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG----- 85 +SL+IG +AV I I + FY ++FRGTPLL+QL++I+YG+ I Sbjct: 39 LSLVIGLLLAVPLAIARGSRRKWIKWPVFFYTYVFRGTPLLIQLYMIYYGVVFIEGIQDT 98 Query: 86 ----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 ++ D+F +I+ TLN +AY +EI +I + +G+ +A+ A G++R +R IIL Sbjct: 99 ILWVVLKDAFFPALIAFTLNTAAYTTEIFHGAIKATSRGEIEAARAYGMSRGLMMRRIIL 158 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 P + +E I +L ++++AS +TI ++ A+ + + Y P + +A +YL Sbjct: 159 PSAFRRALPAYGNEVIFMLHASAIASVVTIMDLTGAARFVYARFYAPFDAFLFVAAIYLC 218 Query: 202 LT 203 LT Sbjct: 219 LT 220 >gi|327394607|dbj|BAK12029.1| histidine transport system permease protein HisM [Pantoea ananatis AJ13355] Length = 238 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 110/196 (56%), Gaps = 11/196 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + +S V+ + +A+ R+ + ISL + + ++FRGTPL VQL V Sbjct: 20 FTGVAITLWLLIVSVVLGGCMAVLLAIARVS-PNRFISLPVWLFTYVFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++ TLN AY +EI +I ++P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTELLNAFFRSGLNCTLLAFTLNTCAYTTEIFAGAIRAVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + T+ S+E I +L ST++A T T+P++ + A+ I + TYQ Sbjct: 139 YGFSTFKLYRCIILPSALRTALPVYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQ 198 Query: 188 PLIIYCELAFVYLILT 203 P + A +YLI++ Sbjct: 199 PFTAFGIAAVLYLIIS 214 >gi|116619007|ref|YP_819378.1| ABC-type amino acid transport system, permease component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097854|gb|ABJ63005.1| amino acid ABC transporter membrane protein 1, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 213 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 111/196 (56%), Gaps = 3/196 (1%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ ++FP L TL + I+ +IS+I+G F A+++I I + YV +FR Sbjct: 3 LLQNNFPTFL-QGFGYTLLSSIIALIISMILGTFFAILQIL-PQKWAQKIGNVYVQVFRN 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PLL+ F F + + I + F A I+L+L SA+I+E +R+ I+S+ GQ + + A Sbjct: 61 IPLLIITFFFFLVVAKV-IPMNGFAAGTIALSLYTSAFIAETVRAGILSVDNGQMEGARA 119 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GL+ Q++R+I+LPQ + L ++FI+++K++S+ + + ++ + +TT+ Sbjct: 120 NGLSFNQSMRYIVLPQAFKIALPSLGNQFINLVKNSSILAFVGGLDLMYQGNMVAATTFD 179 Query: 188 PLIIYCELAFVYLILT 203 Y +A YL++T Sbjct: 180 TFSTYIIVALFYLVIT 195 >gi|91788588|ref|YP_549540.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91697813|gb|ABE44642.1| amino acid ABC transporter membrane protein, PAAT family [Polaromonas sp. JS666] Length = 255 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 123/242 (50%), Gaps = 30/242 (12%) Query: 3 YEWFNL-IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-----TIISL 56 + WF II + L + + +T+ + I V +G I + R+ + + Sbjct: 7 FGWFRADIISEYAVLFWRGLQMTITVTLICIVQGTALGLAIGMARLAQARHAPARQLCQY 66 Query: 57 IMHF----YVWIFRGTPLLVQLFVIFYGL------PHIGIV------------FDSFVAI 94 + + YV FRGTPL VQ+ +I + + P G++ + +F++ Sbjct: 67 ALRWPSTVYVSFFRGTPLFVQILLIHFAVLPLFINPADGLLISGETARNIKQNYGAFLSG 126 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 I++LTLN AYISEI R+ I SI KGQ +AS ++G++ +T+ H++LPQ PL + Sbjct: 127 IVALTLNAGAYISEIFRAGIQSIDKGQVEASRSLGMSFPRTMYHVVLPQAFRRMLPPLGN 186 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKI 213 IS+LK +S+ S I + E+ A+ + + Y ++ +Y +LT Y+++ K+ Sbjct: 187 NAISLLKDSSLISAIGLAELAYAARTVAGAYSRYWEPYLTISLMYWVLTLGLAYVVK-KL 245 Query: 214 ES 215 E+ Sbjct: 246 EA 247 >gi|238920411|ref|YP_002933926.1| arginine transporter permease subunit ArtM [Edwardsiella ictaluri 93-146] gi|238869980|gb|ACR69691.1| octopine transport system permease protein OccM [Edwardsiella ictaluri 93-146] Length = 223 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 99/172 (57%), Gaps = 12/172 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNF 102 I++ ++ Y+ +F GTPLLVQ+F+I+YG + D+ ++ +++L LN Sbjct: 44 ILTPLVQGYITLFTGTPLLVQIFLIYYGPGQFAWIRDTPWLWSALSQPWLCAMLALALNS 103 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +++ ++ +IP GQW + A+G+++ QT+R I+LP + S+E + I KS Sbjct: 104 AAYSTQLFYGAMRAIPNGQWQSCAALGMSKAQTLR-ILLPYAFKRALSSYSNEVVLIFKS 162 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+A TIT+ E+ AQ++ TY ++++ VYL + ++ IE Sbjct: 163 TSLAYTITLMEVMGYAQQLYGRTYD-VMVFGAAGLVYLCVNGLLTLMMRMIE 213 >gi|170754761|ref|YP_001781055.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum B1 str. Okra] gi|169119973|gb|ACA43809.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum B1 str. Okra] Length = 221 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 83/132 (62%), Gaps = 7/132 (5%) Query: 62 VWI--FRGTPLLVQLFVIFYGL----PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 +W+ FRGTPL+ QLF +++G+ P + + D+ A II L N SAY+SE +R +I Sbjct: 57 IWVSFFRGTPLIAQLFFLYFGIVQLIPSLKNM-DAMTAAIIGLGFNASAYMSETLRGAIS 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ KGQ +AS +IG+T Q+++ I PQ + LS+ F+ I+K +++A T+ + EI Sbjct: 116 SVDKGQIEASLSIGMTPIQSMKRIAFPQAARVALPALSNSFVDIIKGSALAFTLGVVEIM 175 Query: 176 QTAQRIVSTTYQ 187 AQ +++Y+ Sbjct: 176 AVAQSEGASSYR 187 >gi|165976776|ref|YP_001652369.1| arginine transporter permease subunit ArtM [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165876877|gb|ABY69925.1| arginine transport system permease protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 227 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 115/211 (54%), Gaps = 13/211 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLF 75 A I +P + +SL+I F +AVI F +I I++ Y+ +F GTPLLVQ F Sbjct: 7 AVIAQGIPTSLSLTAVSLLIAFVLAVILTFLLSMESKLIKAIVNGYLMLFTGTPLLVQFF 66 Query: 76 VIFYGLPHIGIVFDSFVAIIIS---------LTLNFSAYISEIIRSSIISIPKGQWDASY 126 +I++G + DSF +S L LN +AY +++ ++ +IPKGQ + Sbjct: 67 LIYHGPGQFQWIVDSFAWQFLSDAWFCAALALALNSAAYSTQLFHGAVKAIPKGQRETCA 126 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+GL+R T++ I++P + + S+E I + K TS+ASTIT+ +I A+++ T Y Sbjct: 127 ALGLSRLDTLK-ILIPYALRRALPSYSNEIILVFKGTSLASTITLLDIMGYARQLYGTEY 185 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + IY +YL+ T I+ ++E+ V Sbjct: 186 DAITIYGIAGAIYLVSTGIMTILLRRVEAKV 216 >gi|145635026|ref|ZP_01790732.1| arginine transporter permease subunit ArtM [Haemophilus influenzae PittAA] gi|145267634|gb|EDK07632.1| arginine transporter permease subunit ArtM [Haemophilus influenzae PittAA] Length = 227 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 63/197 (31%), Positives = 111/197 (56%), Gaps = 15/197 (7%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 I+F ++L + F +++ + + ++ Y+ +F GTPLLVQ F+I+ G + D Sbjct: 26 IAFCLALFLTFLLSM-----ENKWVKRAVNLYLTLFTGTPLLVQFFLIYAGPGQFQWIID 80 Query: 90 SFVAIIIS---------LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 S + ++S L LN +AY +++ ++ +IPKGQW++ A+GL R QT++ I+ Sbjct: 81 SPLWYVLSNAWFCAALALALNSAAYSTQLFHGAVKAIPKGQWESCGALGLNRIQTLK-IL 139 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 +P + + S+E I + K T++ASTITI +I A+++ T Y L IY +YL Sbjct: 140 IPYALKRALPSYSNEIILVFKGTALASTITIMDIMGYARQLYGTEYDALTIYGIAGGIYL 199 Query: 201 ILTSFCYIIQIKIESSV 217 I+T ++ K+E V Sbjct: 200 IITGIATLLLRKLEKKV 216 >gi|78356475|ref|YP_387924.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218880|gb|ABB38229.1| amino acid ABC transporter membrane protein 1, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 233 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 73/235 (31%), Positives = 130/235 (55%), Gaps = 31/235 (13%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++W ++ + + + +++TL I+ +S ++L++G IAV+R+ S I F V Sbjct: 5 FDWQVVLTGEYREWIIDGVLLTLKISAVSLFLALVLGTVIAVMRL-------SRIRPF-V 56 Query: 63 WI-------FRGTPLLVQLFVIFYG----LPHIGIVF----D-SFVAIIISLTLNFSAYI 106 W FR TPLLVQ+F ++G LP + + D F A +I+LT+ +A+I Sbjct: 57 WFSAGFTEFFRNTPLLVQIFFWYFGSDGLLPRPVLEWLYARDFEFAAGVIALTVYTAAFI 116 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +E IRS I +IPK Q ++S A GL+ Q++R++ILPQ PL S+ ++++K++S+ Sbjct: 117 AEEIRSGINAIPKTQLESSRACGLSFLQSMRYVILPQAFRIIVPPLISQALNLIKNSSLC 176 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TI + E+ +++ S T++ + VYL C I + + +VTQ+ Sbjct: 177 MTIGVAELTYMTRQVESYTFRGFEAFTVATLVYL-----C--ISLAVSFTVTQYN 224 >gi|221209883|ref|ZP_03582864.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD1] gi|221170571|gb|EEE03037.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD1] Length = 500 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 116/215 (53%), Gaps = 8/215 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W + + + + A VV + ++ + + +++GF +A+ R + Sbjct: 1 MQFDWHYALQLLWDKDFWRACVVVVKLSVSVWALGVLLGFPVALARQSHQPAL-KRAAAV 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 Y+W FR PLLV L V Y LP + ++ D F A +I++ + +AY +EI R I+ Sbjct: 60 YIWFFRSLPLLV-LLVFIYNLPQVFPATSAVLSDPFTAGLIAMVFSETAYFAEIHRGGIL 118 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+P+GQ +A A+G+ R I++PQ I + L++EFI+I+K TS+ S I++ EI Sbjct: 119 SVPRGQLEAGRALGIRFTGIQRMIVMPQAIRIALPALANEFITIVKLTSLVSVISLAEIL 178 Query: 176 QTAQRIVSTTYQPLIIYCELAFVY-LILTSFCYII 209 QR+ + + +AF Y LI+T F ++ Sbjct: 179 LVGQRLYTQNFLVFETMLAVAFYYVLIVTVFSRLL 213 >gi|163841375|ref|YP_001625780.1| amino acid ABC transporter permease protein [Renibacterium salmoninarum ATCC 33209] gi|162954851|gb|ABY24366.1| amino acid ABC transporter permease protein [Renibacterium salmoninarum ATCC 33209] Length = 298 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 73/228 (32%), Positives = 117/228 (51%), Gaps = 34/228 (14%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFVIFYGL- 81 TL + S V+++++ +A +R SD I + F+VW FRGTP+ QL +F+G Sbjct: 65 TLVLTVASMVLAIVLAILLAFMRQ--SDNPIFRWVSWFWVWFFRGTPVYTQL--VFWGAI 120 Query: 82 ----PHI--GI-------------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 P I GI V + FVA I+ L LN SAY++EI R+ + S+ KGQ Sbjct: 121 AVLYPKIVIGIPWGPEFLSYNTQDVINFFVASILGLGLNESAYLAEIFRAGLKSVDKGQI 180 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ----TA 178 +A+ A+G+ + + +R I+LPQ + P +E I +LK+TS+ + +P +F Sbjct: 181 EAADALGIRKSKILRRIVLPQAMRVIVPPTGNETIGMLKTTSL--VVAVPFLFGELTFAT 238 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 + + T+ P+ AF YL++TS + Q IE + VD Sbjct: 239 TALANKTFLPIPFLLIAAFWYLLITSIMMVGQYYIER---HYGKGVDN 283 >gi|29833088|ref|NP_827722.1| ABC transporter permease [Streptomyces avermitilis MA-4680] gi|29610210|dbj|BAC74257.1| putative polar amino acid ABC transporter ATP-binding protein [Streptomyces avermitilis MA-4680] Length = 281 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 111/207 (53%), Gaps = 21/207 (10%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + + V+ +G +A R+ ++ ++ + YVW+FR P+LVQL + F Sbjct: 72 LTLWLTAVVMVLGFALGTLLAAGRLS-ANPVLRSVSWGYVWLFRSMPILVQLLLWF---- 126 Query: 83 HIGIVFDSFVAI------------IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 +IG ++ + + I+ LTL+ +AY +E++R I+S+ +GQ +A+ A+GL Sbjct: 127 NIGALYPQILGVKTVNLLGPVTVAIVGLTLHEAAYAAEVVRGGILSVDRGQIEAAQALGL 186 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--P 188 +R + I+LPQ + + P + I LK TS+ S I + ++ + Q + TYQ P Sbjct: 187 SRWRRWWRIVLPQAMRSIVPPAGNMLIGTLKGTSIVSVIAVQDLLYSVQLVYHRTYQVIP 246 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIES 215 L++ + Y+++TS + Q +E Sbjct: 247 LLMVATVW--YVVVTSVLSVGQYYVEK 271 >gi|330971238|gb|EGH71304.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 220 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 111/204 (54%), Gaps = 1/204 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 ++L++ + ++ + ++ +IG ++ + + L + YV + RGTP+ V + Sbjct: 16 EVLWSGFMTSIQCSALAIAAGTLIGMLAGLV-LTYGGFFARLPIRLYVDLIRGTPVFVLV 74 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +FY +P +G +F A I LTL +++SEI+R ++ +IP+GQ +A AIGL Q Sbjct: 75 LAVFYMVPALGWQISAFQAGAIGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFGQ 134 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 ++R+++LPQ + + I+K++++ S I + E+ + Q++++ T+ L Y Sbjct: 135 SLRYVLLPQAMRQILPAWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLF 194 Query: 195 LAFVYLILTSFCYIIQIKIESSVT 218 F++ ++ ++ +IE V Sbjct: 195 AGFLFFLINYAIELLGRQIEKRVA 218 >gi|313115583|ref|ZP_07801042.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310622098|gb|EFQ05594.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 219 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 49/131 (37%), Positives = 83/131 (63%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 ++ I+ Y+ + R TPLLVQLF I+YGLP +GI ++ + I L +Y++E RS Sbjct: 48 VLRQIVGVYIQLSRNTPLLVQLFFIYYGLPKVGIRTNAEICGIAGLAFLGGSYMAEAFRS 107 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +I Q +++Y++G+ R QT+R+IILPQ ++TS + I +LK TSV S I++ Sbjct: 108 GLEAIEPIQTESAYSLGMNRWQTMRYIILPQAMSTSMPAFMANVIFLLKETSVFSAISLM 167 Query: 173 EIFQTAQRIVS 183 ++ TA+ ++ Sbjct: 168 DLMFTAKDLIG 178 >gi|260460036|ref|ZP_05808289.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Mesorhizobium opportunistum WSM2075] gi|259034247|gb|EEW35505.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Mesorhizobium opportunistum WSM2075] Length = 219 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 57/190 (30%), Positives = 103/190 (54%), Gaps = 5/190 (2%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWIFRGTPLLVQ 73 L+ +VT+ + + V++L++ F + R+ FF+ + + Y+ FRGT + VQ Sbjct: 10 LILQGALVTIELTLMGSVLALVMAFLAGLGRLSRFFA---LRALATAYIEFFRGTSIFVQ 66 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LF ++ LP +G A +++L LN AY +E++R ++ SI + Q +A A+ L R Sbjct: 67 LFFAYFVLPLVGFELTPLQAGVLALGLNVGAYAAEVVRGAVQSIGREQHEACIALNLGRW 126 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q +RH+ILPQ + I +LK+TSV S I++ ++ AQ + + T ++ + Sbjct: 127 QGLRHVILPQAFLVMLPTFGNNAIELLKATSVVSLISLGDLTFQAQVVRAQTGNTMVPFT 186 Query: 194 ELAFVYLILT 203 + +Y IL Sbjct: 187 TILIIYFILA 196 >gi|217958227|ref|YP_002336773.1| amino acid ABC transporter, permease protein [Bacillus cereus AH187] gi|228983842|ref|ZP_04144037.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229137441|ref|ZP_04266052.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST26] gi|229154343|ref|ZP_04282463.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus ATCC 4342] gi|217065677|gb|ACJ79927.1| amino acid ABC transporter, permease protein [Bacillus cereus AH187] gi|228629167|gb|EEK85874.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus ATCC 4342] gi|228645999|gb|EEL02222.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST26] gi|228775891|gb|EEM24262.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 218 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 104/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ + V R PL++ F+ ++ LP +GI Sbjct: 25 SVIALIGSFILGVILAVMRIA-PIRILNWLGAAIVEFVRNIPLVLIAFIFYFALPVVGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + +I+LPQ + Sbjct: 84 LNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYVQGMYYIVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGMDLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|238795093|ref|ZP_04638685.1| Histidine transport system permease protein hisQ [Yersinia intermedia ATCC 29909] gi|238725588|gb|EEQ17150.1| Histidine transport system permease protein hisQ [Yersinia intermedia ATCC 29909] Length = 228 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 64/229 (27%), Positives = 116/229 (50%), Gaps = 15/229 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D + +L++ +VTL +A S ++S+IIG A ++ S+ ++S Y + RG Sbjct: 1 MLDGYSKLIFEGALVTLELALCSVLLSVIIGLIGAGGKLS-SNRLLSGFFECYTTLIRGV 59 Query: 69 PLLVQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 P LV + +IFYGL IG I D A II+L + AY +E R + +++ Sbjct: 60 PDLVLMLLIFYGLQITLNSITESIGFEQINIDPLSAGIITLGFIYGAYFTETFRGAYMAV 119 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +A+ A G T Q R I+ P + + + + + ILK+T++ S + + ++ + Sbjct: 120 PSGQIEAATAFGFTPSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKA 179 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 Q TYQP VYL+ T+ + + +E ++++ V + Sbjct: 180 TQLAGKGTYQPFFFALVAGVVYLVFTTVSNGVLLWLER---RYSHGVKR 225 >gi|326560583|gb|EGE10964.1| amino acid ABC transporter permease protein [Moraxella catarrhalis 103P14B1] gi|326561456|gb|EGE11806.1| amino acid ABC transporter permease protein [Moraxella catarrhalis 46P47B1] gi|326565591|gb|EGE15754.1| amino acid ABC transporter permease protein [Moraxella catarrhalis 12P80B1] gi|326568463|gb|EGE18543.1| amino acid ABC transporter permease protein [Moraxella catarrhalis BC7] gi|326576285|gb|EGE26200.1| amino acid ABC transporter permease protein [Moraxella catarrhalis CO72] Length = 240 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 58/164 (35%), Positives = 89/164 (54%), Gaps = 12/164 (7%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYG-----------LPHIG-IVFDSFVAIIISLTL 100 I+ I Y I RG P L+ +F IF+G + + G I F A + +L++ Sbjct: 46 ILQKIADAYTTIVRGIPELLMVFFIFFGGSIILVTIAKQMGYTGRIDVSQFWAGVTALSI 105 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 F AY +E+ R +I IPKGQW+++ +IG+T QT+ IILPQ + L + + +L Sbjct: 106 MFGAYATEVFRMAIQDIPKGQWESAQSIGMTPTQTLTRIILPQMWMVALPGLGNLTLVLL 165 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 K T++ S I + ++ AQR +T +P Y AF+YL LTS Sbjct: 166 KDTALVSLIGLQDLMYFAQRAAQSTQKPFTFYLAAAFIYLALTS 209 >gi|239907739|ref|YP_002954480.1| amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239797605|dbj|BAH76594.1| amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 237 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 110/202 (54%), Gaps = 10/202 (4%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-------PH 83 + ++ ++G +AV+ ++ + + YVW+FRG P+LVQL++ ++G+ P Sbjct: 32 AMLVGFVLGVPLAVLHVY-GHPLTRKAVAGYVWLFRGVPILVQLYLFYFGIMAYLSEIPA 90 Query: 84 IGIV--FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + + F++ +I L L +AY S+I R ++ S+P GQ A+ A+G++ IR IIL Sbjct: 91 LSFLPLSSGFLSAVIVLGLTSAAYQSQIFRGAMASLPAGQLKAARALGMSDAVAIRSIIL 150 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ + + S+E+ +LK +++A TI + E+ + + +TT+QPL + ++ Sbjct: 151 PQALRLAIPAWSNEYSILLKDSALAFTIGVLEVMARTRSVAATTHQPLPLSILAGALFFF 210 Query: 202 LTSFCYIIQIKIESSVTQHTYS 223 LT ++E+ V Y+ Sbjct: 211 LTWAGIKTLKRLEAKVRIPGYA 232 >gi|229590086|ref|YP_002872205.1| glutamine high-affinity transport system; membrane component [Pseudomonas fluorescens SBW25] gi|229361952|emb|CAY48852.1| glutamine high-affinity transport system; membrane component [Pseudomonas fluorescens SBW25] Length = 220 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 90/157 (57%), Gaps = 1/157 (0%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 S I +IG +A + + ++ YV + R TP+LV + +I++ LP +GI D Sbjct: 31 SIAIGCVIGLMMA-FAMLSRHKALRVLASVYVTVIRNTPILVLILLIYFALPSLGIRLDK 89 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 + II+L+L AY++E+ R+ +++IPKG +A AIGL + +I +P + Sbjct: 90 IPSFIITLSLYAGAYLTEVFRAGLLNIPKGLREAGLAIGLGEWRIRAYITVPVMLRNVLP 149 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 LS+ FIS+ K TS+A+ I +PE+ A++I +Y+ Sbjct: 150 ALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYR 186 >gi|319408408|emb|CBI82063.1| ABC transporter, permease protein [Bartonella schoenbuchensis R1] Length = 235 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 113/211 (53%), Gaps = 12/211 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +++TL + IS I +G I + + S+ + + Y + FRG+PLL QLF+ +Y Sbjct: 25 GLIITLELTFISCFIGFFLGILITLAHLS-SNKPLQYLSRAYTYFFRGSPLLAQLFLFYY 83 Query: 80 GLP-------HIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 GL IG+ + ++ + LN +AY ++I S S+ GQ +AS A+G Sbjct: 84 GLGSMSDFWQKIGLWWFFQSAWYCCLFIFALNSAAYQAKIFIGSFQSVATGQHEASKALG 143 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+ T I++PQ + + PL +EFI I+KS+++AS +TI ++ A+ I + T+ Sbjct: 144 LSNSTTFFRILIPQAMILALRPLGNEFILIIKSSAIASLVTIYDLMGIAKLIYARTFD-F 202 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +Y +A +YL + + + IE +T+H Sbjct: 203 QVYVWVAIIYLFIVELIHGFIVLIERRLTRH 233 >gi|153853974|ref|ZP_01995307.1| hypothetical protein DORLON_01298 [Dorea longicatena DSM 13814] gi|149753356|gb|EDM63287.1| hypothetical protein DORLON_01298 [Dorea longicatena DSM 13814] Length = 214 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 116/212 (54%), Gaps = 8/212 (3%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFR 66 +D +++ + +T+ IA V+ + IGF I + + + + I Y+WI R Sbjct: 6 LDVLLPMMFEGLKLTVLIA----VVGIGIGFLIGSLCGYLLQSKYKVGKAIAEVYIWIIR 61 Query: 67 GTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 TPL+VQ ++ +P +G+ S + I + LN A+ISEI++ +++ I GQ +A Sbjct: 62 ATPLMVQALYGYFVIPKLVGVDISSTIVGIGVIALNSGAFISEIVKGALMGIDPGQKEAG 121 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++GLT QT+ H+I+P ++ L ++FI+ +K T++ S I + EI AQ + + Sbjct: 122 ASLGLTSSQTMLHLIIPPAFKSALPALFNQFITSVKDTALLSAIAVNEITHQAQAYAALS 181 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 ++ + Y LA YLI+ S I+Q +IE + Sbjct: 182 FKAIPTYTALAVFYLIILSILIIVQKQIERKM 213 >gi|12056613|gb|AAG47970.1| mimosine transporter permease [Rhizobium sp. TAL1145] Length = 234 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 115/209 (55%), Gaps = 26/209 (12%) Query: 37 IIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-----------PHIG 85 IIG +A++ + ++S+ ++W FRGTP LVQL +++Y L P +G Sbjct: 6 IIGMIVALM-MLSPSKMLSVPAAAFIWWFRGTPALVQL-ILWYNLSLIFKDITLWLPGLG 63 Query: 86 IVFD--------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 VF VA +++L+L+ + Y++EIIR+ + S+ +GQ +A+ +G+ +R Sbjct: 64 TVFSIPTNTVMTPLVAAVVALSLHEAGYMAEIIRNGLKSVNRGQTEAALCLGMKPSLLLR 123 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 I++PQ + P +E I++LK+TS+ S I + ++ +AQ I + T++ + + F Sbjct: 124 RIVIPQAMRVIIPPTGNETINLLKTTSLVSIIAVGDLLYSAQAIYARTFETIPLLLVATF 183 Query: 198 VYLILTSFCYIIQIKIESSVTQHTYSVDK 226 YL++ S I Q +E +H YS D+ Sbjct: 184 WYLVVVSIMTIGQGYLE----RH-YSRDE 207 >gi|315639021|ref|ZP_07894191.1| His/Glu/Gln/Arg/opine ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter upsaliensis JV21] gi|315480933|gb|EFU71567.1| His/Glu/Gln/Arg/opine ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter upsaliensis JV21] Length = 233 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 20/200 (10%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I+ P + AA + TL ++ V SLIIGFF V+ FF + + Y+ Sbjct: 3 FHFILTHIPAFVEAAWL-TLKLSFWGVVFSLIIGFF-CVLMHFFKLKFMGNLCQIYIEFS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD------------------SFVAIIISLTLNFSAYIS 107 R TPLL+QLF ++Y LP +G + +F I+ L+ AY++ Sbjct: 61 RNTPLLIQLFFLYYALPKLGFHLETIFPLNLLCLSVDESLRPAFACAIVGLSFLGGAYMA 120 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E +R+ S+ K Q++A ++G + +R++ILPQ + + +S+ I ++K TSV S Sbjct: 121 EALRAGFESVKKQQFEAGLSLGFSAFGNLRYVILPQALAVAMSGISANIIFLIKETSVVS 180 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I +P++ + + S TY+ Sbjct: 181 IIALPDLVTLMKSLNSLTYK 200 >gi|310644683|ref|YP_003949442.1| polar amino acid uptake family abc transporter, permease protein [Paenibacillus polymyxa SC2] gi|309249634|gb|ADO59201.1| Polar amino acid uptake family ABC transporter, permease protein [Paenibacillus polymyxa SC2] Length = 238 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 119/219 (54%), Gaps = 20/219 (9%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + ++ S PQ++ + VTL IA +S ++ IIG A+IRI+ +++ + YV R Sbjct: 8 DYMLKSLPQIV-EYLPVTLWIAFVSMLLGAIIGLATALIRIY-KVPVLAPLSTLYVSYIR 65 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAII---------------ISLTLNFSAYISEIIR 111 GTPL+VQLF+++YG+P F + + +S +LN Y+SE R Sbjct: 66 GTPLIVQLFLVYYGIPKFLYYFQNEYGFLQQFNVYVIPPELFALLSFSLNLGGYLSETFR 125 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++I S+ +GQ++A+ +IG+++ Q + I+LPQ +T + L + IS +K TS I + Sbjct: 126 AAIHSVDRGQFEAANSIGMSQTQIMLKIVLPQALTVALPNLGNTLISTVKDTSFIFMIGV 185 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 ++ A+ + + +Y ++ +Y ++ C II+ Sbjct: 186 VDMMGQAKIMGARALAFFEVYVAVSLIYWLV---CIIIE 221 >gi|325578842|ref|ZP_08148889.1| arginine ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus parainfluenzae ATCC 33392] gi|325159666|gb|EGC71798.1| arginine ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus parainfluenzae ATCC 33392] Length = 227 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 120/211 (56%), Gaps = 13/211 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLF 75 A I +P + + V++L I FF+A+ F + ++ ++ ++ +F GTPLLVQ F Sbjct: 7 AVIAQGIPTSLLLTVVALFIAFFLALGLTFLLSIGNKLVKSAVNLFLVLFTGTPLLVQFF 66 Query: 76 VIFYG---------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 +I+ G P G+ +++ ++L LN +AY +++ ++ +I KGQW++ Sbjct: 67 LIYAGPGQFQWLVDSPLWGLFSNAWFCAALALALNSAAYSTQLFHGAVKAISKGQWESCA 126 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+GL+R QT++ I++P + + ++E I + K T++ASTITI +I A+++ T Y Sbjct: 127 ALGLSRIQTLK-ILIPYALKRALPSYTNEIILVFKGTALASTITIMDIMGYARQLYGTEY 185 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 L IY +YLI+T ++ ++E+ V Sbjct: 186 DALTIYGIAGGIYLIITGIATLLLRQLENKV 216 >gi|303248477|ref|ZP_07334735.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] gi|302490097|gb|EFL50017.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] Length = 253 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 106/187 (56%), Gaps = 1/187 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++Y W + + + A + +T+ ++ + V+ L G + + + ++ + Sbjct: 29 IQYHWDWNAVWGYRDIFIAGLGMTVYVSAGAIVLGLFFGLASGLASVS-GNVWLTEMAAL 87 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV FRGTPLLVQ+ + ++ + + V +V ++L AYISE++R+ + SI G Sbjct: 88 YVGAFRGTPLLVQILIFYFCVGVVIHVDSPYVIGTVTLAFFSGAYISEMVRAGVESIDVG 147 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+ + + GLT +QT+ ++I PQ I P++ +F+S +K +S+ S I++ E+ + A+ Sbjct: 148 QWETALSSGLTHRQTLFYVIFPQAIRRIVPPVTGQFVSCIKDSSLLSVISVRELTKAAEV 207 Query: 181 IVSTTYQ 187 + STTY+ Sbjct: 208 VNSTTYK 214 >gi|238788679|ref|ZP_04632471.1| Histidine transport system permease protein hisQ [Yersinia frederiksenii ATCC 33641] gi|238723274|gb|EEQ14922.1| Histidine transport system permease protein hisQ [Yersinia frederiksenii ATCC 33641] Length = 228 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 62/229 (27%), Positives = 116/229 (50%), Gaps = 15/229 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D + +L++ +VTL +A S ++S+IIG A ++ S+ ++S + Y + RG Sbjct: 1 MLDGYSKLIFEGALVTLELALCSVLLSVIIGLIGAGGKLS-SNRLLSGLFECYTTLIRGV 59 Query: 69 PLLVQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 P LV + +IFYGL +G I D A II+L + AY +E R + +++ Sbjct: 60 PDLVLMLLIFYGLQITLNTITESLGFEQINIDPLSAGIITLGFIYGAYFTETFRGAYMAV 119 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +A+ A G Q R I+ P + + + + + ILK+T++ S + + ++ + Sbjct: 120 PAGQIEAARAFGFNSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKA 179 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 Q TYQP VYL+ T+ + + +E ++++ V + Sbjct: 180 TQLAGKGTYQPFFFALVAGVVYLVFTTVSNGVLLWLER---RYSHGVKR 225 >gi|329116944|ref|ZP_08245661.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] gi|326907349|gb|EGE54263.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] Length = 234 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 57/173 (32%), Positives = 101/173 (58%), Gaps = 8/173 (4%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 I YV +++ TPLLVQL +FYGL H ++ +F+ ++ + + AYI+E+IRS Sbjct: 65 IARIYVELYQNTPLLVQLVFVFYGLAIITHGHLMISTFMTAVLCVGIYHGAYIAEVIRSG 124 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I S+P+GQ +A+ + G T +QT+ I+LPQ + T P++++ ++++K+TS+ + I+ + Sbjct: 125 IESVPRGQIEAALSQGFTYEQTMSLIVLPQALRTILPPMTNQVVNLIKNTSIVAIISGAD 184 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ--IKIESSVTQHTYSV 224 I TA+ T + + A +Y IL CY + + + + TYSV Sbjct: 185 IMFTAKAWAYDTTNYVPAFAGAAILYFIL---CYPLAHWARHKEEENKKTYSV 234 >gi|297160231|gb|ADI09943.1| amino acid ABC transporter transmembrane protein [Streptomyces bingchenggensis BCW-1] Length = 216 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 60/192 (31%), Positives = 105/192 (54%), Gaps = 13/192 (6%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-----IS 55 M ++W ++ D P+L +++TL + V+S +G A+ F S T ++ Sbjct: 1 MNWDW-DVAKDFLPEL-GDGLLITLEATALGSVLSFALGLVWALA--FRSPTRFVRWPVA 56 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 ++ F R TPLLVQLF +Y LP I F + +I+L L++S Y +E+ R+ I Sbjct: 57 AVVEF----IRNTPLLVQLFFFYYVLPTWDIKFSALTTGVIALGLHYSTYTAEVYRAGID 112 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +PKGQW+A A+ L+R +T +ILPQ I L + I++LK + + + I + ++ Sbjct: 113 GVPKGQWEACTALSLSRGRTWIAVILPQAIRRVVPALGNYVIAMLKDSPMLALIGVVDML 172 Query: 176 QTAQRIVSTTYQ 187 Q A+ +T+++ Sbjct: 173 QKARAHGATSFE 184 >gi|255023479|ref|ZP_05295465.1| L-cystine transport system permease protein TcyL [Listeria monocytogenes FSL J1-208] Length = 194 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 102/181 (56%), Gaps = 13/181 (7%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPH----IGI---VFDSFVAIIISLTLNFSAY 105 ++ + Y+ FRGTP++VQLF++FYG+P +GI D A I + L+ +A Sbjct: 8 VLDQLARVYISFFRGTPIMVQLFIVFYGIPALSSIVGIDLSQMDPLYAAIATYALSSAAT 67 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 I+E+IR+ + S+ GQ +A+Y++GL +QT IILPQ + + + I LK TS+ Sbjct: 68 IAEVIRAGVNSVDAGQTEAAYSVGLNGRQTFLRIILPQALYQALPNFGNLVIGYLKDTSL 127 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY-----LILTSFCYIIQIKIESSVTQH 220 A +I + ++ Q +++ + L +Y L+ +Y L+ SF + I+ +++ T+ Sbjct: 128 AFSIGVMDMSGRGQTLITLSNHALEVYISLSIIYYLTAVLLEYSFKW-IEKRVKKENTRF 186 Query: 221 T 221 T Sbjct: 187 T 187 >gi|228995973|ref|ZP_04155629.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides Rock3-17] gi|229003590|ref|ZP_04161406.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides Rock1-4] gi|228757632|gb|EEM06861.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides Rock1-4] gi|228763746|gb|EEM12637.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides Rock3-17] Length = 233 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 101/174 (58%), Gaps = 1/174 (0%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 ++ + S I+G +AV+RI +++ YV R PL++ FV ++ P +G+ + Sbjct: 42 VALIGSFILGTIMAVMRIA-PIRVLNWFGAAYVEFIRNIPLVLIAFVFYFAFPVMGVTLN 100 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 F+A +LT+ +A+I+E IR+ I+S+PKGQ +A+ + GLT Q + +I+LPQ I Sbjct: 101 GFIAGTAALTIYTAAFIAEAIRAGILSVPKGQMEAARSSGLTYVQAMYYIVLPQAIKIVI 160 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YL+LT Sbjct: 161 PPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTRTFVTFDVYIFVGMFYLLLT 214 >gi|218888236|ref|YP_002437557.1| polar amino acid ABC transporter inner membrane protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218759190|gb|ACL10089.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 233 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 116/212 (54%), Gaps = 12/212 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++W ++ + Q + +VVT I+ +S V+++ +G IAV+R+ ++ F Sbjct: 4 NFDWKLVLSGEYLQWIIDGVVVTCQISALSLVLAMALGTLIAVMRLSAVRPLVWFSAGF- 62 Query: 62 VWIFRGTPLLVQLFVIFYG----LPHI------GIVFDSFVAIIISLTLNFSAYISEIIR 111 FR TPLLVQ+F ++G LP F+ F A +ISL + +A+I+E IR Sbjct: 63 TEFFRNTPLLVQIFFWYFGSDAVLPTAVNQWLYKQNFE-FAAGVISLAVYTAAFIAEEIR 121 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S I SIP+ Q +AS A GLT Q +R+++LPQ PL S+ +++ K++S+ TI + Sbjct: 122 SGIFSIPRTQLEASRACGLTFLQAMRYVVLPQAFRIIVPPLISQALNLFKNSSLCMTIGV 181 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+ A++I S T+ + +YL ++ Sbjct: 182 MELTYMARQIESYTFHGFEAFTVSTLIYLTIS 213 >gi|154149257|ref|YP_001406028.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Campylobacter hominis ATCC BAA-381] gi|153805266|gb|ABS52273.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter hominis ATCC BAA-381] Length = 235 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 59/163 (36%), Positives = 97/163 (59%), Gaps = 13/163 (7%) Query: 34 ISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL----FVIFYGLPHIGIVFD 89 I + +GF +A ++ F + I++ I+ Y+ I RGTP+++QL FVIF + Sbjct: 52 IGIFLGFILAFLK-FANFKILNFIIDEYIDIIRGTPIVIQLMIFVFVIFASWTN------ 104 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 + A + +L LN SAY++EI+RS I SI KGQ +A+ A+GL ++R I+ PQ I Sbjct: 105 NIAAAVFALGLNSSAYVAEIVRSGINSIDKGQMEAARAMGLNYTTSMRKIVFPQAIKNIL 164 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY--QPLI 190 L++EFIS+ K TSV + I ++ ++ + +T Y QP++ Sbjct: 165 PALANEFISLFKETSVVGMVAITDLTFFSKSLQATLYTVQPIL 207 >gi|52424276|ref|YP_087413.1| arginine transporter permease subunit ArtQ [Mannheimia succiniciproducens MBEL55E] gi|52306328|gb|AAU36828.1| ArtM protein [Mannheimia succiniciproducens MBEL55E] Length = 223 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 116/219 (52%), Gaps = 12/219 (5%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM--HFYVWIFRGTPLLVQ 73 L+ A ++TL +A S + L++ F V+ ++ + + +V + RG P ++ Sbjct: 8 LMSTATLMTLGLAVCSLIAGLVLAIFFVVLE---TNKFVCVRKPTAIFVTLLRGLPEILV 64 Query: 74 LFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 + +I++G L I F F+ +I+L + F+AY S+ +R +I +IP GQW++ Sbjct: 65 VLLIYFGSTELVEKLTGEYIEFSPFLCGVIALAIIFAAYASQTLRGAIQAIPLGQWESGA 124 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+GL+R T +IILPQ + LS++++ +LK T++ S I + ++ + A + + T+ Sbjct: 125 ALGLSRGYTFVNIILPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLMRQASLVNTNTH 184 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 QP Y A +YLI+T K+E T+ V Sbjct: 185 QPFTWYSFAALLYLIITLVSQFFMRKLEMRFTRFERGVK 223 >gi|238787905|ref|ZP_04631701.1| Amino acid ABC transporter, permease protein [Yersinia frederiksenii ATCC 33641] gi|238723853|gb|EEQ15497.1| Amino acid ABC transporter, permease protein [Yersinia frederiksenii ATCC 33641] Length = 227 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 99/178 (55%), Gaps = 5/178 (2%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH----FYVWIFRGT 68 P+LL + ++ T+ + ++ + + +G A IR ++ S+I+ YV I R T Sbjct: 14 LPELL-SGLLTTIELTAMATIGGMALGIVGAAIRCSDNNASGSVILRRAWGGYVEIVRNT 72 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P +VQLF I +GLP +G+ + A ++++ +N AY +EIIR+ I + KGQW+A + Sbjct: 73 PFVVQLFFIVFGLPALGLKLSAGQAALLAMIINLGAYSTEIIRAGIQASAKGQWEAGRVL 132 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 GL+R QT +ILP ++ L S+ I ++ ++V S + E+ A I S T+ Sbjct: 133 GLSRSQTFFRVILPPSLQRIYPALVSQCIIVMLGSAVVSQVAFEELTFAANLIQSRTF 190 >gi|238751270|ref|ZP_04612764.1| Histidine transport system permease protein hisM [Yersinia rohdei ATCC 43380] gi|238710544|gb|EEQ02768.1| Histidine transport system permease protein hisM [Yersinia rohdei ATCC 43380] Length = 214 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 67/191 (35%), Positives = 107/191 (56%), Gaps = 11/191 (5%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + S V+ ++ +AV R+ I L + + +IFRGTPL VQL V + G+ Sbjct: 1 MTLWLLITSVVMGGLLAIPLAVARVA-ERRWIRLPVWIFTYIFRGTPLYVQLLVFYSGMY 59 Query: 83 HIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 + IV ++F I++LTLN AY +EI +I S+P G+ +A+ A G +R Sbjct: 60 SLEIVRGNDLLNAFFRSGLNCTILALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSR 119 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 + R IILP + + S+E I +L ST++A T T+P+I + A+ I + TYQP + Sbjct: 120 FKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDILKIARDINAATYQPFYAF 179 Query: 193 CELAFVYLILT 203 A +YLI++ Sbjct: 180 GIAAVLYLIIS 190 >gi|121728667|ref|ZP_01681685.1| arginine ABC transporter, permease protein [Vibrio cholerae V52] gi|121629078|gb|EAX61524.1| arginine ABC transporter, permease protein [Vibrio cholerae V52] Length = 222 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 62/217 (28%), Positives = 112/217 (51%), Gaps = 25/217 (11%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTIISLIMHFYVWIFRGTP 69 L+ + ++L + S ++ I+ + V + +FS +I+L F GTP Sbjct: 9 LFEGLGISLQLTAASLLVGCILSLLMTVSLVMRTPVVDWFSRAVITL--------FTGTP 60 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAI---------IISLTLNFSAYISEIIRSSIISIPKG 120 LLVQ+F+++YG + +S + + +++L LN +AY +++ + + +IP G Sbjct: 61 LLVQIFLVYYGPGQFEWIRESVLWVWLSQPWFCAMLALALNTAAYSTQLFKGAFNAIPSG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW A A+G+ + T+R ++LP + + S+E I + K TS+ASTITI ++ AQR Sbjct: 121 QWQACRALGMNKIATLR-VLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYAQR 179 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 I + TY L ++ YL + +I +IE Sbjct: 180 INAQTYDTLTVFGIAGTFYLTVNGILTLIFRQIEKKA 216 >gi|328956870|ref|YP_004374256.1| glutamine ABC transporter permease protein GlnM [Carnobacterium sp. 17-4] gi|328673194|gb|AEB29240.1| glutamine ABC transporter permease protein GlnM [Carnobacterium sp. 17-4] Length = 215 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 101/181 (55%), Gaps = 9/181 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +++ID F LY++I I+ SLIIG +A+ ++ + + + YV F+ Sbjct: 10 DVLIDGFLNTLYSSI--------IALFFSLIIGTLMAISQLS-KKKWLKRLANAYVEFFK 60 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PLL+ + + +P D F A I LT+ SA+I+E +R+ I+ +PKGQ +A Sbjct: 61 NIPLLIIVMFFYVVVPLYWFSIDGFTAGTIGLTIYTSAFIAETVRAGIMGVPKGQTEAGL 120 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 + GLT+ +T+R+IILPQ PL ++FI+++K++SV + +T ++ I S T+ Sbjct: 121 STGLTQNETMRYIILPQAFKIVIPPLGNQFINLVKNSSVLAMVTGLDLMYQGDLIASETF 180 Query: 187 Q 187 Sbjct: 181 N 181 >gi|251791765|ref|YP_003006486.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247540386|gb|ACT09007.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 247 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 112/198 (56%), Gaps = 21/198 (10%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ + Q L+ VTL +A ++ V++ ++G +A R + + L++ Y +FR Sbjct: 14 LLAPQYLQWLWQGFQVTLGLAAVTVVLATLLGLILAAGRDSRTWLLRWLVIA-YCSLFRN 72 Query: 68 TPLLVQLFVIFYGL--------------PHI----GIVFDSF--VAIIISLTLNFSAYIS 107 TPLLVQLF ++G+ PHI G+ SF +A + LTL +A+I+ Sbjct: 73 TPLLVQLFFWYFGVAQLLPAGLMQWLNSPHIIPLVGLNIPSFEFLAGLFGLTLYSAAFIA 132 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E IR+ I + +GQ A+ A+GLT Q +R+++LPQ + + PL ++++I+K++S+A Sbjct: 133 EEIRAGIAGVARGQQYAACALGLTHWQAMRYVVLPQALRIALPPLLGQYMNIIKNSSLAM 192 Query: 168 TITIPEIFQTAQRIVSTT 185 I + E+ ++++ + T Sbjct: 193 AIGVAELSYASRQVETET 210 >gi|50121971|ref|YP_051138.1| histidine ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49612497|emb|CAG75947.1| histidine ABC transporter permease protein [Pectobacterium atrosepticum SCRI1043] Length = 238 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 114/214 (53%), Gaps = 11/214 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL + S VI ++ +A+ R+ SL + + ++FRGTPL VQL V + Sbjct: 22 GLAMTLWLLISSVVIGGLMALPLAIARVS-PRRRFSLPVWLFTYVFRGTPLYVQLLVFYS 80 Query: 80 GLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 G+ + IV ++F I++L LN AY +EI +I S+P G+ +A+ A G Sbjct: 81 GVYSLEIVRGTDLLNAFFRSGLNCAILALALNTCAYTTEIFAGAIRSVPHGEIEAARAYG 140 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 +R + R IILP + + S+E I +L ST++A T+T+P+I + A+ I + TYQP Sbjct: 141 FSRFKQYRCIILPSALRIALPAYSNEVILMLHSTALAFTVTVPDILKIARDINAATYQPF 200 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + A +YL ++ + K E +H Y+ Sbjct: 201 YAFGIAAVIYLAISFVLIGMFRKAERHWLRHLYT 234 >gi|17231657|ref|NP_488205.1| permease protein of amino acid ABC transporter [Nostoc sp. PCC 7120] gi|17133300|dbj|BAB75864.1| permease protein of amino acid ABC transporter [Nostoc sp. PCC 7120] Length = 308 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 68/236 (28%), Positives = 117/236 (49%), Gaps = 36/236 (15%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTP 69 D++ L+ ++ +L IA + +++ I+G + R+ SD ++ I YV IFR TP Sbjct: 73 DTYSLALWVGLINSLRIAFVGIILTTIVGILAGIARL--SDNWLVRNISLVYVEIFRNTP 130 Query: 70 LLVQL----FVIFYGLPH----------IGIVFDS-----------FVAIIISLTLNFSA 104 LL+QL F +F GLP IG+ + F A+++ L A Sbjct: 131 LLLQLLFWYFAVFLGLPRADNKISLGGFIGLSQNGLELPWFTFSPEFSALLLGLIFYTGA 190 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 +I+EI+R I S+ KGQW+A ++GL +R +I PQ + PL+S+++++ K++S Sbjct: 191 FIAEIVRGGIQSVSKGQWEAGRSLGLNPSLIMRLVIFPQALRVIIPPLTSQYLNLTKNSS 250 Query: 165 VASTITIPEIF--------QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIK 212 +A I P+I+ QT + + L + LI+ +F +QIK Sbjct: 251 LAIAIGYPDIYFVASTTFNQTGKAVEVMLLLMLTYLSLSLTISLIMNAFNRTVQIK 306 >gi|170703106|ref|ZP_02893925.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170131985|gb|EDT00494.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 246 Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 65/199 (32%), Positives = 108/199 (54%), Gaps = 13/199 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ +++VI+LI+G V+R + +S I YV IFR PL+VQ FV Sbjct: 26 LMSGFWVTIEVSLVAWVIALIVGSLFGVLRTV-PNKWLSAIGTVYVSIFRNIPLIVQFFV 84 Query: 77 IFYGLPH-----IGIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + +P +G F A I+ L L A + E +RS I ++PKGQ A Sbjct: 85 WYLVVPELLPASVGTWIKQLPPSTQFFTASIVCLGLFTGARVCEQVRSGINALPKGQRAA 144 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 145 GLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDY 204 Query: 185 TYQPLIIYCELAFVYLILT 203 T Q + + Y+++ Sbjct: 205 TAQTYESFIAVTLAYVVIN 223 >gi|330901738|gb|EGH33157.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] gi|330981317|gb|EGH79420.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 220 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 111/204 (54%), Gaps = 1/204 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 ++L++ + ++ + ++ +IG ++ + + L + YV + RGTP+ V + Sbjct: 16 EVLWSGFLTSIQCSALAIAAGTLIGMLAGLV-LTYGGFFARLPIRLYVDLIRGTPVFVLV 74 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +FY +P +G +F A I LTL +++SEI+R ++ +IP+GQ +A AIGL Q Sbjct: 75 LAVFYMVPALGWQISAFQAGAIGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFNQ 134 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 ++R+++LPQ + + I+K++++ S I + E+ + Q++++ T+ L Y Sbjct: 135 SLRYVLLPQAMRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLF 194 Query: 195 LAFVYLILTSFCYIIQIKIESSVT 218 F++ ++ ++ +IE V Sbjct: 195 AGFLFFLINYAIELLGRQIEKRVA 218 >gi|311107287|ref|YP_003980140.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Achromobacter xylosoxidans A8] gi|310761976|gb|ADP17425.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Achromobacter xylosoxidans A8] Length = 223 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 46/135 (34%), Positives = 81/135 (60%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 I+SL F + R TPLLVQ++ +FY LP G+ I +L L+++ Y +E+ R+ Sbjct: 52 IVSLPTAFVIEFVRSTPLLVQMYFLFYVLPLTGVRLSPLATGIAALGLHYATYCAEVYRA 111 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I ++P+GQW+A+ A+ ++R +T ++LPQ I L + +++ K T + S IT+ Sbjct: 112 GIEAVPRGQWEAATALNMSRWRTAVGVVLPQAIPPVVPALGNYLVAMFKDTPLLSAITVV 171 Query: 173 EIFQTAQRIVSTTYQ 187 E+ Q ++ I S T++ Sbjct: 172 ELLQQSKMIGSATFR 186 >gi|269967642|ref|ZP_06181692.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 40B] gi|269827729|gb|EEZ82013.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 40B] Length = 172 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 52/145 (35%), Positives = 84/145 (57%), Gaps = 5/145 (3%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIP 118 +FRGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I +P Sbjct: 6 LFRGTPLLVQLYLIYYGMDQFFPVKDTLWENAWFCALVAFILNTSAYTAEIIRGAINGLP 65 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG+ +A+ A G+++ T R IILP + + S+E I +L ++VA +TI ++ A Sbjct: 66 KGEVEAAKAYGMSKFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAA 125 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT 203 + + S Y P + Y+ LT Sbjct: 126 RLVNSRYYAPFESFLTAGLFYMALT 150 >gi|229844867|ref|ZP_04465005.1| arginine transporter permease subunit ArtM [Haemophilus influenzae 6P18H1] gi|229812248|gb|EEP47939.1| arginine transporter permease subunit ArtM [Haemophilus influenzae 6P18H1] Length = 222 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/197 (31%), Positives = 111/197 (56%), Gaps = 15/197 (7%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 I+F ++L + F +++ + + ++ Y+ +F GTPLLVQ F+I+ G + D Sbjct: 26 IAFCLALFLTFLLSM-----ENKWVKRAVNLYLTLFTGTPLLVQFFLIYAGPGQFQWIID 80 Query: 90 SFVAIIIS---------LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 S + ++S L LN +AY +++ ++ +IPKGQW++ A+GL R QT++ I+ Sbjct: 81 SPLWYVLSNAWFCAALALALNSAAYSTQLFHGAVKAIPKGQWESCGALGLNRIQTLK-IL 139 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 +P + + S+E I + K T++ASTITI +I A+++ T Y L IY +YL Sbjct: 140 IPYALKRALPSYSNEIILVFKGTALASTITIMDIMGYARQLYGTEYDALTIYGIAGGIYL 199 Query: 201 ILTSFCYIIQIKIESSV 217 I+T ++ K+E V Sbjct: 200 IITGIATLLLRKLEKKV 216 >gi|229056416|ref|ZP_04195829.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH603] gi|228720890|gb|EEL72439.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH603] Length = 206 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 104/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ I +V R PL++ F+ ++ LP IGI Sbjct: 13 SVIALIGSFILGVILAVMRIS-PIRILNWIGSAFVEFVRNIPLVLIAFIFYFALPVIGIT 71 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +++I+E+IR+ I+S+ KGQ +A+ + GLT Q + +++LPQ + Sbjct: 72 LNGFVAGTVTLTVYTASFIAEVIRAGILSVAKGQMEAARSSGLTYVQGMYYVVLPQAMKI 131 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T +Y + YLILT Sbjct: 132 VIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTKTLVTFDVYIFVGMFYLILT 187 >gi|55821558|ref|YP_140000.1| polar amino acid ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55823486|ref|YP_141927.1| amino acid (glutamine) ABC transporter permease [Streptococcus thermophilus CNRZ1066] gi|55737543|gb|AAV61185.1| polar amino acid ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55739471|gb|AAV63112.1| amino acid (glutamine) ABC transporter permease protein [Streptococcus thermophilus CNRZ1066] gi|312278895|gb|ADQ63552.1| Amino acid (Glutamine) ABC transporter permease protein [Streptococcus thermophilus ND03] Length = 226 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 101/183 (55%), Gaps = 1/183 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A +TL IA + + S ++G ++VIR + I+S + Y+ + R TP L+QLF +++ Sbjct: 16 AFFLTLHIAVMGIIGSFLLGLVVSVIR-HYRVPILSQLSTAYIELSRNTPFLIQLFFLYF 74 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP IG+V S ++ L +Y++E RS + ++ + Q + +IGLT Q R++ Sbjct: 75 GLPRIGLVLSSEACAVVGLIFLGGSYMAESFRSGLEAVSQTQHEVGLSIGLTPFQVFRYV 134 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LPQ + + S+ I ++K TSV S + + ++ A+ ++ Y+ + L Y Sbjct: 135 VLPQAVAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLMGLYYETDVALGMLVVAY 194 Query: 200 LIL 202 L++ Sbjct: 195 LLM 197 >gi|292487348|ref|YP_003530220.1| putative ABC transporter inner membrane protein [Erwinia amylovora CFBP1430] gi|292898593|ref|YP_003537962.1| ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291198441|emb|CBJ45549.1| ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291552767|emb|CBA19812.1| putative ABC transport system, inner membrane component [Erwinia amylovora CFBP1430] gi|312171454|emb|CBX79712.1| putative ABC transport system, inner membrane component [Erwinia amylovora ATCC BAA-2158] Length = 218 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 49/147 (33%), Positives = 84/147 (57%), Gaps = 3/147 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y +F+GTPLL+QLF+ F+G+ G+ + A ++LT SA++ +I SI ++PKG Sbjct: 56 YAELFQGTPLLMQLFLAFFGVALFGLDLSPWAAAALALTCYTSAFLLDIWYGSIKALPKG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A +GL QT+ ++LPQ + P + ++K T++AS I E+ + Sbjct: 116 QWEACRCLGLGIGQTLFRVVLPQALRIGIAPTVGFAVQVVKGTALASIIGFIELTKAGTI 175 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCY 207 + + TYQP ++ +A Y ++ CY Sbjct: 176 LNNVTYQPFKVFGLVALGYFLM---CY 199 >gi|238753376|ref|ZP_04614739.1| Glutamine transport system permease protein glnP [Yersinia ruckeri ATCC 29473] gi|238708329|gb|EEQ00684.1| Glutamine transport system permease protein glnP [Yersinia ruckeri ATCC 29473] Length = 204 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 91/144 (63%), Gaps = 1/144 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 ++ + RGTP++VQ+ I++ LP + + D F A ++++ +N AYI+EI R +++SI Sbjct: 44 FIELIRGTPIVVQVMFIYFALPMMMPVRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHN 103 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G +A A+GL+++ T+R++I P + PL +++I +K TS+ I + E+ + Q Sbjct: 104 GFREAGLALGLSKRDTLRYVIAPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQ 163 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I++ ++ + I+ +A +YLI+T Sbjct: 164 EIIAGNFRAMEIWTAVAVIYLIIT 187 >gi|220923864|ref|YP_002499166.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium nodulans ORS 2060] gi|219948471|gb|ACL58863.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 217 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 97/170 (57%), Gaps = 2/170 (1%) Query: 34 ISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFV 92 I L IG F+A++++ ++ I +V FR PLLV L +Y +P + I Sbjct: 32 IGLAIGLFVALLQLT-PWRLVRWIGRIWVEFFRNIPLLVLLLWTYYAMPIFLQIQVAKET 90 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 A I+ L S + +EI+R+ + SI +GQ DAS A+G++ Q +R IILPQ + PL Sbjct: 91 AGILGLGFYASGFYAEILRAGVQSIDRGQTDASLALGMSYIQRMRRIILPQALRRMVPPL 150 Query: 153 SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + I LK+T++ S +TIP++ A I S TY+P+ +Y + V++++ Sbjct: 151 VGQTIMQLKNTTLLSVLTIPDLLYQASYISSFTYRPMEVYTVIGIVFVLI 200 >gi|291618213|ref|YP_003520955.1| HisM [Pantoea ananatis LMG 20103] gi|291153243|gb|ADD77827.1| HisM [Pantoea ananatis LMG 20103] Length = 253 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 110/196 (56%), Gaps = 11/196 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + +S V+ + +A+ R+ + ISL + + ++FRGTPL VQL V Sbjct: 35 FTGVAITLWLLIVSVVLGGCMAVLLAIARVS-PNRFISLPVWLFTYVFRGTPLYVQLLVF 93 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++ TLN AY +EI +I ++P G+ +A+ A Sbjct: 94 YSGMYTLEIVKGTELLNAFFRSGLNCTLLAFTLNTCAYTTEIFAGAIRAVPHGEIEAARA 153 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IILP + T+ S+E I +L ST++A T T+P++ + A+ I + TYQ Sbjct: 154 YGFSTFKLYRCIILPSALRTALPVYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQ 213 Query: 188 PLIIYCELAFVYLILT 203 P + A +YLI++ Sbjct: 214 PFTAFGIAAVLYLIIS 229 >gi|242240716|ref|YP_002988897.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242132773|gb|ACS87075.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 502 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/168 (38%), Positives = 99/168 (58%), Gaps = 8/168 (4%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 Y+W+FR PLLV L IF LP I G++ D F A +I+L ++ +AYI+EI R ++ Sbjct: 60 YIWLFRSLPLLVLLIFIF-NLPQIFPLTAGLLSDPFSAGLIALIVSETAYIAEIHRGGLL 118 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ KGQ++A A+GL Q +I++PQ + S L +EFI+I+K TS+ S I++ EI Sbjct: 119 SVQKGQFEAGRALGLRAAQIRFYIVIPQALRISLPTLVNEFITIVKLTSLVSVISLSEIL 178 Query: 176 QTAQRIVSTTYQPLIIYCELAFVY-LILTSFCYIIQ-IKIESSVTQHT 221 QR+ + ++ L +A Y LI+T F +I ++ V Q T Sbjct: 179 MVGQRLYTENFKVLETLLAVACYYVLIVTLFERLIGWLEKRMDVQQRT 226 >gi|225350816|ref|ZP_03741839.1| hypothetical protein BIFPSEUDO_02386 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158272|gb|EEG71514.1| hypothetical protein BIFPSEUDO_02386 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 218 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 103/172 (59%), Gaps = 4/172 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I+ V+S+++G A I I ++ I+ Y+ + R TPLLVQL+ +++GLP Sbjct: 20 MTLFISVFGIVLSIVVGLICASIEIA-RIPVLKQIVRVYIELSRNTPLLVQLYFLYFGLP 78 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 +G+V+ + I+ L +Y++E +R + +IP Q +++Y +GL++ QT+ +++P Sbjct: 79 KLGVVWSAEQCAIVGLGFLGGSYMAEAMRGGLETIPTVQRESAYVLGLSQWQTLSRVVIP 138 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS---TTYQPLII 191 Q I+TS + + I ++K +SV S I + ++ A+ ++ TY+ L++ Sbjct: 139 QAISTSIPGIVANVIFLIKESSVVSAIALADVMYMAKDLIGMYYNTYESLLM 190 >gi|16119635|ref|NP_396341.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15162205|gb|AAK90782.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 284 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 116/218 (53%), Gaps = 15/218 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 +++TL + + V +IIG +AV+ + ++ I +VW FRG PL+VQ+F F Sbjct: 64 GGVILTLELTAGAMVAGIIIGCLVAVMATS-QNIVLKAIAVAFVWWFRGVPLIVQIFFWF 122 Query: 79 Y---GLPHIG----------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 +P IG IV +F A ++L L+ +A +SEIIRS + ++ +GQ +A+ Sbjct: 123 NIALFVPEIGFGSWSVSVNDIVTPAF-AGFLALGLHEAANMSEIIRSGLTAVDRGQREAA 181 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++GL QT+R ++LPQ I P ++ I +LK++++ S I + ++ AQ I + Sbjct: 182 SSLGLRPLQTLRTVVLPQAIRLIVPPTGNQAIGMLKASAIVSVIGMQDLLTQAQAIYARN 241 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + + + C + YL +T+ I Q +E + S Sbjct: 242 FLVIELLCVASLWYLGITTIASIGQHYLERKLAPKGRS 279 >gi|325525014|gb|EGD02926.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. TJI49] Length = 246 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/185 (34%), Positives = 103/185 (55%), Gaps = 17/185 (9%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ +++VI+LI+G V+R + +S I YV IFR PL+VQ F+ Sbjct: 26 LMSGFWVTIEVSLVAWVIALIVGSLFGVLRTV-PNKWLSAIGTVYVSIFRNIPLIVQFFI 84 Query: 77 IFYGLPHI--------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + +P + G F F A I+ L L A + E +RS I ++PKGQ Sbjct: 85 WYLVVPELLPASIGTWIKQLPPGTQF--FTASIVCLGLFTGARVCEQVRSGINALPKGQR 142 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 143 AAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLV 202 Query: 183 STTYQ 187 T Q Sbjct: 203 DYTAQ 207 >gi|317486179|ref|ZP_07945018.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] gi|316922570|gb|EFV43817.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] Length = 229 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 117/219 (53%), Gaps = 3/219 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I+++ P +L + VVTL S + IG +AV++++ + I ++ YVW FRG Sbjct: 11 ILNALPYILQGS-VVTLITVIGSLALGFCIGLPLAVLQVY-GPSFIRRLIGVYVWFFRGM 68 Query: 69 PLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 P+L+ LF+ ++GL IG+ + A + L + +AY S+I R SI ++P GQ+ A+ A Sbjct: 69 PILLLLFLFYFGLFEVIGLNLSTITASCLVLGMASAAYQSQIFRGSIETLPVGQFRAARA 128 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ Q IRHI+LPQ + S S+EF +LK +++ + PEI + S TY+ Sbjct: 129 LGMNDGQAIRHIVLPQALRLSIPGWSNEFSILLKDSALCFVLGTPEIMARTHFVASRTYE 188 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 L +Y +Y +T I +E V Y+V Sbjct: 189 HLPLYITAGLLYFGITLVGVHILRVLERKVHIPGYAVSG 227 >gi|238793404|ref|ZP_04637029.1| Glutamine transport system permease protein glnP [Yersinia intermedia ATCC 29909] gi|238727177|gb|EEQ18706.1| Glutamine transport system permease protein glnP [Yersinia intermedia ATCC 29909] Length = 189 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 91/144 (63%), Gaps = 1/144 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 ++ + RGTP++VQ+ I++ LP + + D F A ++++ +N AYI+EI R +++SI Sbjct: 29 FIELIRGTPIVVQVMFIYFALPMMMPVRIDPFSAAVVTIIINSGAYIAEITRGAVLSIHN 88 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G +A A+GL+++ T+R++I P + PL +++I +K TS+ I + E+ + Q Sbjct: 89 GFREAGLALGLSKRDTLRYVIAPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQ 148 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I++ ++ + I+ +A +YLI+T Sbjct: 149 EIIAGNFRAMEIWSAVAVIYLIIT 172 >gi|315650944|ref|ZP_07903984.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Eubacterium saburreum DSM 3986] gi|315486790|gb|EFU77132.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Eubacterium saburreum DSM 3986] Length = 216 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 56/151 (37%), Positives = 93/151 (61%), Gaps = 4/151 (2%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GI-VFDSF--VAIIISLTLNFSAYISEI 109 +S + Y+ I RGTPL++QL V+++G +I G+ + S+ VA +I +N++AY +EI Sbjct: 46 VSYLCKIYISIMRGTPLMLQLMVVYFGPYYIFGVSITGSYRIVATVIGFVINYAAYFAEI 105 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 RS I S+ GQ++A+ +G T+ QT IILPQ I +++E I+++K TS+A TI Sbjct: 106 YRSGIQSMSGGQYEAAKILGYTKSQTFFVIILPQVIKRILPSVTNEVITLVKDTSLAFTI 165 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 ++ E+F A+ + S+T C F Y+ Sbjct: 166 SVAEMFTMAKALASSTTSMYPFVCAALFYYI 196 >gi|239624577|ref|ZP_04667608.1| polar amino acid ABC transporter [Clostridiales bacterium 1_7_47_FAA] gi|239520963|gb|EEQ60829.1| polar amino acid ABC transporter [Clostridiales bacterium 1_7_47FAA] Length = 219 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/173 (33%), Positives = 102/173 (58%), Gaps = 7/173 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + ++ I ++ V SL +G +A R+ + + I+ Y+ I RGTPL++QL V Sbjct: 13 LAGGMGTSIQIFMVTLVFSLPLGLVVAFGRMS-KNKYLQAIVKVYISIMRGTPLMLQLMV 71 Query: 77 IFYGLPH--IGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +++G P+ G+ S A I +N++AY +EI RS I S+P GQ++A+ +G + Sbjct: 72 VYFG-PYYLFGLKMGSGYRLWAAFIGFVINYAAYFAEIYRSGIQSMPVGQYEAAQILGYS 130 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 R QT IILPQ I +++E I+++K TS+A T+++ E+F A+ + ++ Sbjct: 131 RFQTFFKIILPQVIKRILPSVTNEVITLVKDTSLAFTLSVAEMFSIAKGLAAS 183 >gi|153833137|ref|ZP_01985804.1| arginine ABC transporter, permease protein [Vibrio harveyi HY01] gi|156976756|ref|YP_001447662.1| arginine transporter permease subunit ArtM [Vibrio harveyi ATCC BAA-1116] gi|148870567|gb|EDL69475.1| arginine ABC transporter, permease protein [Vibrio harveyi HY01] gi|156528350|gb|ABU73435.1| hypothetical protein VIBHAR_05531 [Vibrio harveyi ATCC BAA-1116] Length = 222 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 90/163 (55%), Gaps = 10/163 (6%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSI 114 +F GTPLLVQ+F+++YG V +S + +++L LN +AY +++ + + Sbjct: 55 LFTGTPLLVQIFLVYYGPGQFDAVRESVFWTWLSQPWFCAMLALALNTAAYSTQLFKGAF 114 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IP GQW A A+G+ + T++ ++LP I + S+E I + K TS+ASTITI ++ Sbjct: 115 NAIPSGQWQACRALGMNKAATLK-VLLPYAIRRAVPAYSNEVILVFKGTSLASTITIMDL 173 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 AQRI + TY L ++ YL + +I ++E Sbjct: 174 MGYAQRINAQTYDTLTVFGIAGAFYLTVNGVLTLIFRQVEKKA 216 >gi|148653870|ref|YP_001280963.1| polar amino acid ABC transporter inner membrane subunit [Psychrobacter sp. PRwf-1] gi|148572954|gb|ABQ95013.1| polar amino acid ABC transporter, inner membrane subunit [Psychrobacter sp. PRwf-1] Length = 246 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 13/206 (6%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + F LL + ++T+ +A S I L++G A ++ I+ + Y RG P Sbjct: 4 LQGFGHLLLSGSLITIKLALSSLAIGLVLGLLGATAKLS-KIWILRKLATVYTATMRGIP 62 Query: 70 LLVQLFVIFYG--------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 L+ + ++YG L G + F+A +++L++ F AY +E+ R +I I Sbjct: 63 ELLLVLFLYYGGSMLIMAILQKFGYNDYVEVSPFLAGVLALSIAFGAYATEVFRMAIQEI 122 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKGQW+A+ AIG+ Q II+PQ + L + F+ +LK T++ S + + +I Sbjct: 123 PKGQWEAAEAIGMKPMQLYFRIIVPQVWRLALPGLGNLFLVLLKDTALVSVVGLKDIMYH 182 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 A R T Q Y AF+YL LT Sbjct: 183 AARGAQATQQAFTFYMAAAFIYLGLT 208 >gi|332523898|ref|ZP_08400150.1| ABC transporter, permease protein [Streptococcus porcinus str. Jelinkova 176] gi|332315162|gb|EGJ28147.1| ABC transporter, permease protein [Streptococcus porcinus str. Jelinkova 176] Length = 234 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 67/220 (30%), Positives = 120/220 (54%), Gaps = 14/220 (6%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 +FP L A + TL ++ + +++L++G + YV +++ TPLL Sbjct: 22 NFP-LFAKAFLYTLGMSIGALILALVLGILFGALSTS-KKKGYRTCARVYVELYQNTPLL 79 Query: 72 VQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 VQL ++YGL I I+ SF ++ + + AYI+E+IRS I ++PKGQ +AS + Sbjct: 80 VQLVFVYYGLAIISNGHIMISSFFTAVLCVGVYHGAYIAEVIRSGIEAVPKGQIEASLSQ 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV--STTY 186 G T +QT+ I+LPQ + T P++++ ++++K+TS+ + I+ +I TA+ ST Y Sbjct: 140 GFTYEQTMSLIVLPQAVRTILPPMTNQVVNLIKNTSIVAIISGADIMFTAKAWAYESTNY 199 Query: 187 QPLIIYCELAFVYLILTSFCYIIQ--IKIESSVTQHTYSV 224 P + A +Y I+ C+ + + + + TYSV Sbjct: 200 VP--AFAGAAILYFIM---CFPLANWARRKEEANKKTYSV 234 >gi|218886665|ref|YP_002435986.1| polar amino acid ABC transporter inner membrane protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757619|gb|ACL08518.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 226 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 115/201 (57%), Gaps = 3/201 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E II++ P +L ++V T+ + + L++G ++V +++ + L++ FYVW Sbjct: 3 ESITTIIEALPYILEGSLV-TVATVFGAMALGLLLGVPMSVAQVY-GALPVRLVVGFYVW 60 Query: 64 IFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FRG P+LV L + ++GL IG+ +F A + L + +AY S+I R +I+++P+GQ Sbjct: 61 FFRGMPILVLLLLFYFGLFQLIGLNLSAFTASCLVLGMTSAAYQSQIFRGAILALPQGQL 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A+ A+G++ IR I+LPQ + S S+E+ +LK +++A + PEI + Sbjct: 121 RAARALGMSDGTAIRSIVLPQALRLSIPGWSNEYSILLKDSALAFVLGTPEIMARTHFVA 180 Query: 183 STTYQPLIIYCELAFVYLILT 203 S TY+ L +Y +Y ++T Sbjct: 181 SRTYEHLPLYMTAGALYFVIT 201 >gi|167750527|ref|ZP_02422654.1| hypothetical protein EUBSIR_01503 [Eubacterium siraeum DSM 15702] gi|167656453|gb|EDS00583.1| hypothetical protein EUBSIR_01503 [Eubacterium siraeum DSM 15702] gi|291557064|emb|CBL34181.1| amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-) [Eubacterium siraeum V10Sc8a] Length = 219 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 95/176 (53%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 ++ +I I+ Y+ I R TPLLVQLF I+YGLP +GI D+ I L +Y++ Sbjct: 43 YYKVPVIRRIVSVYIEISRNTPLLVQLFFIYYGLPKVGIPTDAETCGIAGLAFLGGSYMA 102 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E RS + S+ K Q +++Y++G+ + Q +R++ILPQ ++ S + I ++K TSV S Sbjct: 103 EAFRSGLESVDKIQTESAYSLGMNKMQAMRYVILPQAMSVSIPAFVANVIFLMKETSVFS 162 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 I++ ++ A+ ++ C L YLI+ I+ +E V + + Sbjct: 163 AISLLDLMFMAKDLMGMYNDTTEALCLLVGFYLIILLPISIVGTIVERRVRRAGFG 218 >gi|167461573|ref|ZP_02326662.1| glutamine ABC transporter (permease) [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381528|ref|ZP_08055507.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154535|gb|EFX46832.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 217 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 103/180 (57%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + ++ S ++G AV+RI + ++ +I YV FR PLL+ + + G + Sbjct: 21 TVKASLLALAGSFVLGVIFAVMRIS-TFRLLRIIGTAYVEFFRNIPLLLIVMFFYLGSGN 79 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ D F A I L + SA+I+E IR+ I+++PKGQ +A + GLT QT+++I+L Q Sbjct: 80 LGLNLDGFEAGTIGLAIYTSAFIAEAIRAGILAVPKGQVEAGRSSGLTYLQTMQYIVLLQ 139 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I PL ++F++++K++SV + ++ I S T++ Y +A YL+LT Sbjct: 140 AIKIVIPPLGNQFLNLIKNSSVLGVVAGLDLMYFGDLINSETFKVFGTYIFVAMFYLLLT 199 >gi|24112047|ref|NP_706557.1| glutamate/aspartate transport system permease [Shigella flexneri 2a str. 301] gi|30062158|ref|NP_836329.1| glutamate/aspartate transport system permease [Shigella flexneri 2a str. 2457T] gi|110804697|ref|YP_688217.1| glutamate/aspartate transport system permease [Shigella flexneri 5 str. 8401] gi|24050871|gb|AAN42264.1| glutamate/aspartate transport system permease [Shigella flexneri 2a str. 301] gi|30040403|gb|AAP16135.1| glutamate/aspartate transport system permease [Shigella flexneri 2a str. 2457T] gi|110614245|gb|ABF02912.1| glutamate/aspartate transport system permease [Shigella flexneri 5 str. 8401] gi|281600011|gb|ADA72995.1| Glutamate/aspartate transport system permease [Shigella flexneri 2002017] gi|313649700|gb|EFS14124.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella flexneri 2a str. 2457T] gi|332760974|gb|EGJ91262.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella flexneri 4343-70] gi|332761329|gb|EGJ91615.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella flexneri 2747-71] gi|332763343|gb|EGJ93583.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella flexneri K-671] gi|332768243|gb|EGJ98428.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella flexneri 2930-71] gi|333007894|gb|EGK27370.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella flexneri K-218] gi|333021478|gb|EGK40728.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella flexneri K-304] Length = 246 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 54/213 (25%), Positives = 119/213 (55%), Gaps = 14/213 (6%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 ++ VT+ ++ +++I+ ++G F ++R + +S + YV +FR PL+VQ F Sbjct: 26 WSGFQVTIALSICAWIIAFLVGSFFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFTW 84 Query: 78 FYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + +P IG+ F + F++ ++ L L +A + E +R++I S+P+GQ +A Sbjct: 85 YLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNA 144 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 145 ALAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDY 204 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ +F ++ +E V Sbjct: 205 SAHAWESFTAITLAYVLINAFIMLVMTLVERKV 237 >gi|87121722|ref|ZP_01077609.1| putative amino-acid transport system permease abc transporter protein [Marinomonas sp. MED121] gi|86162973|gb|EAQ64251.1| putative amino-acid transport system permease abc transporter protein [Marinomonas sp. MED121] Length = 270 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 110/209 (52%), Gaps = 23/209 (11%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L I T+ + I+F+I+ IIG +A+ F +I + FYV + RG P+LV LF Sbjct: 41 LSQGIATTVTVTLIAFLIACIIGLIMALAG-FSRYRLIREVARFYVEVIRGVPVLVLLFY 99 Query: 77 I-FYGLPHIGIVFDSFVA---------------------IIISLTLNFSAYISEIIRSSI 114 I F G P + ++ + I++L +++SA+I+E+ R+ I Sbjct: 100 IAFVGAPELVDFYNWLMQKPIEWQWVDKARTRDFNMVWRAILALCISYSAFIAEVFRAGI 159 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 + KGQ +A+ A+GL+ Q R II PQ PL ++F++++K +++ S + + +I Sbjct: 160 QEVDKGQIEAAKALGLSGWQRFRFIIFPQAFRKILPPLGNDFVAMIKDSALVSALGVQDI 219 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 Q + S+++Q Y +AFVYL LT Sbjct: 220 TQLGKVYSSSSFQFFETYNVVAFVYLCLT 248 >gi|327396675|dbj|BAK14096.1| probable amino-acid ABC transporter permease protein YckA [Pantoea ananatis AJ13355] Length = 216 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 107/189 (56%), Gaps = 2/189 (1%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P LL A +T+ I +S +IS +G A ++ IIS + + I R P++V Sbjct: 11 PFLLQGA-EMTIYITILSLLISTPLGLVFAAAKMC-PFKIISWPVSVIINITRALPMIVV 68 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LF ++ P IGI SF A ++ + FS +++EI RS I S+ +GQ +A+ ++G++ Sbjct: 69 LFYTYFVFPDIGITLTSFQASVVGIAFCFSTFLAEIFRSGIESVDRGQLEAARSMGMSFF 128 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + +R +ILPQ + P S+ + +LK +++ASTI + E+ + Q + ++T+ +Y Sbjct: 129 KAMRRVILPQAFHVALPPYSNTLVMMLKDSALASTIAVTEMTRQGQLLAASTFDNTTVYT 188 Query: 194 ELAFVYLIL 202 +A +YL L Sbjct: 189 LVALLYLTL 197 >gi|238026229|ref|YP_002910460.1| hypothetical protein bglu_1g05600 [Burkholderia glumae BGR1] gi|237875423|gb|ACR27756.1| Hypothetical protein bglu_1g05600 [Burkholderia glumae BGR1] Length = 246 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 17/224 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ +++VI+L++G V+R + +S + YV IFR PL+VQ FV Sbjct: 26 LLSGFWVTIKVSLVAWVIALVVGSLFGVLRTV-PNRWLSALGTLYVSIFRNIPLIVQFFV 84 Query: 77 IFYGLPHI--------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + +P + G F F A ++ L L A + E +RS I ++PKGQ Sbjct: 85 WYLVVPELLPPALGTWIKQLPPGTQF--FTASVVCLGLFTGARVCEQVRSGIAALPKGQR 142 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A A+G T QT R ++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 143 AAGLAMGFTEWQTYRFVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLV 202 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 T Q + + Y+I+ + IES Y K Sbjct: 203 DYTAQTYESFIAVTLAYVIINLVVMALMRWIESRTRLPGYIGGK 246 >gi|218886439|ref|YP_002435760.1| polar amino acid ABC transporter inner membrane protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757393|gb|ACL08292.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 337 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/152 (34%), Positives = 93/152 (61%), Gaps = 9/152 (5%) Query: 61 YVWIFRGTPLLVQLFVIFY--G------LPHIGIVFDS-FVAIIISLTLNFSAYISEIIR 111 Y+ I RG+PLLVQ+F+ ++ G L H+G+ S +++L L AY++EI+R Sbjct: 170 YIEIIRGSPLLVQIFLWYFVVGTLINALLEHVGLGGISPLWYGVMALALFTGAYVAEIVR 229 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + I S+ +GQ +A+ ++G+ Q +R +ILPQ PL+ +FIS++K +S+ I I Sbjct: 230 AGIQSVHRGQMEAARSLGMNYAQAMRKVILPQAFRRIMPPLAGQFISLIKDSSLLGVIAI 289 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+ + + +V+T+ QP ++ A +YL+LT Sbjct: 290 RELTKATREVVTTSLQPFELWIVCAVLYLVLT 321 >gi|283853864|ref|ZP_06371080.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] gi|283570739|gb|EFC18783.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] Length = 233 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 114/196 (58%), Gaps = 14/196 (7%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 +++ ++ + Q L + +V TL I+ +S V+SL +G +AV+R+ ++ + F Sbjct: 5 FDFGQVVSGEYGQWLVSGLVTTLKISSLSIVLSLGLGTLVAVLRLSKVRPLVWISAGF-T 63 Query: 63 WIFRGTPLLVQLFVIFYG----LPHIGIVFD-------SFVAIIISLTLNFSAYISEIIR 111 FR TPLLVQ+F ++G LP+ V + F +I+LT+ +A+I+E IR Sbjct: 64 EFFRNTPLLVQIFFWYFGSYSILPNF--VNEWLYKQDFEFACGVIALTVYTAAFIAEEIR 121 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S I SIPK Q +AS A GL+ Q + ++ILPQ PL S+F++++K++S+ TI + Sbjct: 122 SGIFSIPKNQLEASRACGLSFVQAMGYVILPQAFRVIIPPLISQFLNLIKNSSLVMTIGV 181 Query: 172 PEIFQTAQRIVSTTYQ 187 ++ A++I + T+ Sbjct: 182 MDLTYMARQIEAHTFH 197 >gi|251781980|ref|YP_002996282.1| hypothetical protein SDEG_0566 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390609|dbj|BAH81068.1| hypothetical protein SDEG_0566 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 233 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 123/219 (56%), Gaps = 10/219 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 ++FP L A + TL ++ + ++++++G I + +I YV ++ TPL Sbjct: 20 NNFP-LFLKAFLYTLGVSLAALLLAMVLGVIIGGLSTA-KQKGNRVIARVYVEFYQNTPL 77 Query: 71 LVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 LVQ+ ++YGL I F +F+ + + L +AYI+E+IRS I ++PKGQ +A+ + Sbjct: 78 LVQVVFMYYGLAIISKGFIMPSAFLTTVCCVGLYHAAYIAEVIRSGIEAVPKGQTEAALS 137 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G TR QT+ II+PQ + T PL+++ ++++K+TS+ + I+ ++ TA+ T Sbjct: 138 QGFTRLQTMSLIIIPQAVRTILPPLTNQVVNLIKNTSIVAIISGADLMFTAKVWAYDTTY 197 Query: 188 PLIIYCELAFVYLILTSFCYIIQI--KIESSVTQHTYSV 224 + + AF+Y IL C+ I I + + + TYS+ Sbjct: 198 YVPAFAGAAFLYFIL---CFPIAIFGRRQEERNKETYSL 233 >gi|157370639|ref|YP_001478628.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157322403|gb|ABV41500.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 240 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 112/214 (52%), Gaps = 19/214 (8%) Query: 9 IIDSFPQLLY--AAIVVTLPIACISFVISLIIGFFIAV---IRIFFSDTIISLIMHFYVW 63 ++D+ P L+ + V L + F++S++ G +A I + +S ++ + Sbjct: 6 MLDAAPSFLWSDGSDVTGLAMTAKLFLLSVVPGLLLAALMAIGQVYGPRPLSWLIRSVTY 65 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIV--------------FDSFVAIIISLTLNFSAYISEI 109 FR TPL +QL +I+YGL +V D+ ++L LN SAY++++ Sbjct: 66 FFRSTPLYLQLMLIYYGLSQFDVVQLGWQNDQPFWLLFRDATFCATLALVLNTSAYVAQL 125 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 + + + P+ +W A A G+++ Q IR ++LP T+ L++E + +L +TS+AST+ Sbjct: 126 LAGMMETFPRQEWIAGEAYGMSQWQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTV 185 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 T+ +I A+ + TY P I + A +YL+ T Sbjct: 186 TLLDITGVARAFYAATYSPFIPFLMAAALYLLCT 219 >gi|283832470|ref|ZP_06352211.1| arginine ABC transporter, permease protein ArtM [Citrobacter youngae ATCC 29220] gi|291072129|gb|EFE10238.1| arginine ABC transporter, permease protein ArtM [Citrobacter youngae ATCC 29220] Length = 222 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 122/220 (55%), Gaps = 18/220 (8%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ P+LL + +L + S V++LI+ +I + ++ L+ Y+ +F GT Sbjct: 1 MLEYLPELL-KGLHTSLTLTVASIVVALILALIFTIILTLKTPVLVWLV-RAYITLFTGT 58 Query: 69 PLLVQLFVIFYG------------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 PLLVQ+F+I+YG L H+ + + ++ +I+L+LN +AY +++ +I + Sbjct: 59 PLLVQIFLIYYGPGQFPTLQEYPLLWHL--LSEPWLCALIALSLNSAAYTTQLFYGAIRA 116 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQW + A+G+++K T+ I+LP + S+E + + KSTS+A TIT+ E+ Sbjct: 117 IPEGQWQSCGALGMSKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMG 175 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 +Q + TY ++++ +YLI+ ++ IE Sbjct: 176 YSQLLYGRTYD-VMVFGAAGVIYLIVNGLLTLMMRLIERK 214 >gi|15890239|ref|NP_355911.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15158429|gb|AAK88696.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 221 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 1/177 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L+ VVT+ I + V+ ++ FF ++R+ I+S + Y +FRGT LLVQLF Sbjct: 9 MLWQGAVVTMTITLAALVVGTVLAFFFGILRVE-GGPILSTVALCYTEVFRGTSLLVQLF 67 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +Y LP IG+ FD ++ L + Y +EI+R ++ S+ Q +A+ A+ TR QT Sbjct: 68 WFYYALPLIGLSFDPVTTGVMVLAAHAGGYGAEIVRGALSSVSVQQLEAARALNFTRMQT 127 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 + I LPQ + + I LK +S+ S I+I ++ AQ I + T IY Sbjct: 128 LFRISLPQAVVEMMPAFGNLAIETLKLSSLVSLISIADLTFAAQSIRNLTLDSTSIY 184 >gi|331002712|ref|ZP_08326227.1| hypothetical protein HMPREF0491_01089 [Lachnospiraceae oral taxon 107 str. F0167] gi|330407125|gb|EGG86629.1| hypothetical protein HMPREF0491_01089 [Lachnospiraceae oral taxon 107 str. F0167] Length = 227 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/202 (31%), Positives = 112/202 (55%), Gaps = 5/202 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +E+ +I P ++AA++ TL I + + ++ IG +I + I+ ++ Sbjct: 9 MDFEFIRQVI---PLYIHAALL-TLKIGILGIISAIAIGLLCTLI-LHKKIPILKQLVSI 63 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ R TPLL+QLF I+YGLP +GI D+ + + L +Y+ E RS I +I K Sbjct: 64 YIEFSRNTPLLIQLFFIYYGLPKLGIKVDADICGVFGLAFLGGSYMCEAFRSGIETIDKI 123 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++GL+ Q + +I+LPQ ++ S + I +LK TSV S I++ ++ TA+ Sbjct: 124 QEESALSLGLSHNQALFYILLPQAVSISTPAFVANIIFLLKETSVFSAISLMDLMFTAKD 183 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 ++ Y+ + L F YLI+ Sbjct: 184 LIGLYYKTVESLALLVFFYLII 205 >gi|260889042|ref|ZP_05900305.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Leptotrichia hofstadii F0254] gi|260861102|gb|EEX75602.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Leptotrichia hofstadii F0254] Length = 521 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 111/219 (50%), Gaps = 20/219 (9%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH---------------FYVWI 64 V TL I+ V+ IG +A++R +S+ I H Y+ + Sbjct: 293 GTVSTLYISITGTVVGFFIGLLVALLR--YSEAEIDGQSHKYKKTGLKFLNWLSSIYIAV 350 Query: 65 FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRGTP++VQ VI+YGL + I VA + +++N AY+SEIIR I SI GQ++ Sbjct: 351 FRGTPMIVQSMVIYYGLSQVFHINLSPMVAALFIVSINTGAYMSEIIRGGIDSIDNGQFE 410 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ AIG+T Q ++ II PQ + +E I +K TSV + I++ E+F + +V Sbjct: 411 AAKAIGMTNFQLMQSIIFPQMFRNILPMIGNELIVNIKDTSVLNVISVTELFFISNSVVG 470 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT--QH 220 T + ++ + +Y LT +I +IE + QH Sbjct: 471 TYSRYYEVFIITSVIYFFLTFTLSLILKQIEKRIDGPQH 509 >gi|227515553|ref|ZP_03945602.1| glutamate ABC superfamily ATP binding cassette transporter permease protein [Lactobacillus fermentum ATCC 14931] gi|227085983|gb|EEI21295.1| glutamate ABC superfamily ATP binding cassette transporter permease protein [Lactobacillus fermentum ATCC 14931] Length = 227 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/180 (35%), Positives = 99/180 (55%), Gaps = 16/180 (8%) Query: 37 IIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY------GLPH---IGIV 87 +IG + ++R+ I S I Y+ I RGTP ++Q+ +I+Y LP +G Sbjct: 32 LIGLLMVLMRMSKVKPI-SWIARAYIAIVRGTPSMIQVMLIYYLLARSLPLPQTQILGSG 90 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 D + I+L LN AY +EI RS IISIP GQ +A ++GL++K+T+ I+LPQ + Sbjct: 91 LDRIIPGAIALGLNSGAYTAEIFRSGIISIPAGQTEAGLSLGLSQKETMFSIVLPQALRN 150 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCELAFVYLILTS 204 + +EFI+++K +SV I + EI A + T Y PL++ A +Y ILT Sbjct: 151 VLPAMGNEFITLIKESSVLFYIGVQEITAEALGVGGTLYNFIPPLLVA---AVIYFILTQ 207 >gi|184155853|ref|YP_001844193.1| glutamate ABC transporter permease component [Lactobacillus fermentum IFO 3956] gi|183227197|dbj|BAG27713.1| glutamate ABC transporter permease component [Lactobacillus fermentum IFO 3956] Length = 229 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/180 (35%), Positives = 99/180 (55%), Gaps = 16/180 (8%) Query: 37 IIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY------GLPH---IGIV 87 +IG + ++R+ I S I Y+ I RGTP ++Q+ +I+Y LP +G Sbjct: 34 LIGLLMVLMRMSKVKPI-SWIARAYIAIVRGTPSMIQVMLIYYLLARSLPLPQTQILGSG 92 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 D + I+L LN AY +EI RS IISIP GQ +A ++GL++K+T+ I+LPQ + Sbjct: 93 LDRIIPGAIALGLNSGAYTAEIFRSGIISIPAGQTEAGLSLGLSQKETMFSIVLPQALRN 152 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ---PLIIYCELAFVYLILTS 204 + +EFI+++K +SV I + EI A + T Y PL++ A +Y ILT Sbjct: 153 VLPAMGNEFITLIKESSVLFYIGVQEITAEALGVGGTLYNFIPPLLVA---AVIYFILTQ 209 >gi|241113570|ref|YP_002973405.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861778|gb|ACS59444.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 219 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 105/191 (54%), Gaps = 5/191 (2%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWIFRGTPLLVQ 73 L+ +VTL + + ++L++ F + R+ FF+ + + Y+ FRGT + VQ Sbjct: 10 LILEGALVTLELTIMGSALALVMAFLAGLGRLSRFFA---VRALATAYIEFFRGTSIFVQ 66 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LF +++ LP G+ A +++L LN AY +E++R ++ ++ + Q +A A+ L+R Sbjct: 67 LFWVYFVLPFAGLTLTPLQAGVLALGLNVGAYAAEVVRGAVKAVGREQSEACIALNLSRY 126 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q +RH+ILPQ + + I +LK T+V S I++ ++ AQ + + T L+ + Sbjct: 127 QRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTDMTFQAQVVRAQTGNTLVPFA 186 Query: 194 ELAFVYLILTS 204 + +Y ++ S Sbjct: 187 TILILYFLMAS 197 >gi|332704738|ref|ZP_08424826.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio africanus str. Walvis Bay] gi|332554887|gb|EGJ51931.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio africanus str. Walvis Bay] Length = 225 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 75/219 (34%), Positives = 117/219 (53%), Gaps = 3/219 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 II + P LL ++ T I + ++ L G +AV + + ++ + + YVW FRG Sbjct: 8 IIQALPYLLEGSLT-TAGIVIGAMILGLSFGVPLAVAQAY-GGSVTRRLANIYVWFFRGV 65 Query: 69 PLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 P+LV LF+ ++GL + IG+ +F + II L L +AY S+I R +I S+P GQ A+ A Sbjct: 66 PVLVLLFLFYFGLFNLIGLNLSAFTSAIIVLGLTSAAYQSQIFRGAIQSLPHGQLKAAKA 125 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ I IILPQ + S S+E+ ILK ++VA + EI + S TY+ Sbjct: 126 LGMNEFTAITSIILPQALRLSIPGWSNEYSIILKDSAVAFVLGTAEIMARTHFVASRTYE 185 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 L +Y A +Y ILT F + +E V Y+V + Sbjct: 186 HLPLYMTAAVLYFILTWFGVRALLHLERKVRIPGYAVHQ 224 >gi|319946731|ref|ZP_08020965.1| ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus australis ATCC 700641] gi|319746779|gb|EFV99038.1| ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus australis ATCC 700641] Length = 226 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/191 (30%), Positives = 102/191 (53%), Gaps = 1/191 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A +T IA + S ++G +++IR + I+S + Y+ + R T Sbjct: 5 IVEQYFPLYQQAFFLTFHIAVWGILGSFLLGLIVSIIR-HYRIPILSQLAGCYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IGIV S V I L +Y++E RS + ++ + Q + +I Sbjct: 64 PLLIQLFFLYFGLPRIGIVLSSEVCATIGLIFLGGSYMAESFRSGLEAVSQTQHEIGLSI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT +Q R++ILPQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 124 GLTPRQVFRYVILPQATAVALPSFSANVIFLIKETSVFSVVALADLMYVAKDLIGLYYET 183 Query: 189 LIIYCELAFVY 199 I L Y Sbjct: 184 DIALTMLVIAY 194 >gi|225387881|ref|ZP_03757645.1| hypothetical protein CLOSTASPAR_01651 [Clostridium asparagiforme DSM 15981] gi|225046008|gb|EEG56254.1| hypothetical protein CLOSTASPAR_01651 [Clostridium asparagiforme DSM 15981] Length = 263 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/222 (26%), Positives = 107/222 (48%), Gaps = 12/222 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-----------IISL 56 L+ + + ++++ A VI +IGF + +++ ++ + L Sbjct: 11 LVFSKYGMSMLQGALISMESALAGTVIGCLIGFAVGIVQTIHTEKGDNPIKKGVVWAVKL 70 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 +++ YV FRGTP++ Q I+YGL P + I A I L++N AY++E +R I+ Sbjct: 71 VLNAYVEFFRGTPMMAQAMFIYYGLFPLLNINMTMLKAAIFILSINTGAYMAETVRGGIL 130 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SI GQ + + +IG+T QT+ ++ILPQ + + + I +K + V S I + E+ Sbjct: 131 SIDPGQTEGAKSIGMTHVQTMIYVILPQALRNIMPQIGNNLIINIKDSCVLSVIGLAELL 190 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + Y Y +Y I+T C I ++E+ + Sbjct: 191 YKTKAAAGALYMNFETYTITMIMYFIMTFTCSRILRRLENKM 232 >gi|261820775|ref|YP_003258881.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261604788|gb|ACX87274.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 238 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 114/214 (53%), Gaps = 11/214 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL + S VI ++ +A+ R+ S + + ++FRGTPL VQL V + Sbjct: 22 GLAMTLWLLISSVVIGGLMALPLAIARVS-PRRRFSFPVWLFTYVFRGTPLYVQLLVFYS 80 Query: 80 GLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 G+ + IV ++F I++L LN SAY +EI +I S+P G+ +A+ A G Sbjct: 81 GVYSLEIVRGTDLLNAFFRSGLNCAILALALNTSAYTTEIFAGAIRSVPHGEIEAARAYG 140 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 +R + R IILP + + S+E I +L ST++A T+T+P+I + A+ I + TYQP Sbjct: 141 FSRFKQYRCIILPSALRIALPAYSNEVILMLHSTALAFTVTVPDILKIARDINAATYQPF 200 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + A +YL ++ + + E +H Y+ Sbjct: 201 YAFGIAAVIYLAISFVLIGLFRRAERRWLRHLYT 234 >gi|116248725|ref|YP_764566.1| putative permease component of ABC transporter protein [Rhizobium leguminosarum bv. viciae 3841] gi|115253375|emb|CAK11763.1| putative permease component of ABC transporter protein [Rhizobium leguminosarum bv. viciae 3841] Length = 221 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 105/191 (54%), Gaps = 5/191 (2%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWIFRGTPLLVQ 73 L+ +VTL + + ++L++ F + R+ FF+ + + Y+ FRGT + VQ Sbjct: 12 LILEGALVTLELTIMGSALALVMAFLAGLGRLSRFFA---VRALATAYIEFFRGTSIFVQ 68 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LF +++ LP G+ A +++L LN AY +E++R ++ ++ + Q +A A+ L+R Sbjct: 69 LFWVYFVLPFAGLTLTPLQAGVLALGLNVGAYAAEVVRGAVKAVGREQSEACIALNLSRY 128 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q +RH+ILPQ + + I +LK T+V S I++ ++ AQ + + T L+ + Sbjct: 129 QRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTDMTFQAQVVRAQTGNTLVPFA 188 Query: 194 ELAFVYLILTS 204 + +Y ++ S Sbjct: 189 TILILYFLMAS 199 >gi|323126803|gb|ADX24100.1| amino acid ABC transporter, permease protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 233 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 123/219 (56%), Gaps = 10/219 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 ++FP L A + TL ++ + ++++++G I + +I YV ++ TPL Sbjct: 20 NNFP-LFLKAFLYTLGVSLAALLLAMVLGVIIGGLSTA-KQKGNRVIARVYVEFYQNTPL 77 Query: 71 LVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 LVQ+ ++YGL I F +F+ + + L +AYI+E+IRS I ++PKGQ +A+ + Sbjct: 78 LVQVVFMYYGLAIISKSFIMPSAFLTTVCCVGLYHAAYIAEVIRSGIEAVPKGQTEAALS 137 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G TR QT+ II+PQ + T PL+++ ++++K+TS+ + I+ ++ TA+ T Sbjct: 138 QGFTRLQTMSLIIIPQAVRTILPPLTNQVVNLIKNTSIVAIISGADLMFTAKVWAYDTTY 197 Query: 188 PLIIYCELAFVYLILTSFCYIIQI--KIESSVTQHTYSV 224 + + AF+Y IL C+ I I + + + TYS+ Sbjct: 198 YVPAFAGAAFLYFIL---CFPIAIFGRRQEERNKETYSL 233 >gi|308187188|ref|YP_003931319.1| glutamine transport system permease protein glnP [Pantoea vagans C9-1] gi|308057698|gb|ADO09870.1| Putative glutamine transport system permease protein glnP [Pantoea vagans C9-1] Length = 222 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 57/174 (32%), Positives = 99/174 (56%), Gaps = 6/174 (3%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH-IGIVFD 89 FVI L+ G A I + +V + RGTP++VQ+ I++ LP I I D Sbjct: 37 GFVIGLLAGACRA-----LGGRITKTLSLIFVELIRGTPIMVQVMFIYFALPMVIPIRID 91 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 A I+++ +N AYI+EI R +I+SI KG +AS A+GL+++ T H+I+P + Sbjct: 92 PITAAIVTIVINSGAYIAEITRGAILSINKGFKEASLAMGLSQRSTQWHVIMPLALRRMI 151 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +++I +K TS+ I + E+ + Q I++ ++ L ++ +A +YL++T Sbjct: 152 PALGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEVWTAVAMIYLLVT 205 >gi|218548380|ref|YP_002382171.1| arginine transporter permease subunit ArtM [Escherichia fergusonii ATCC 35469] gi|218355921|emb|CAQ88536.1| arginine transporter subunit ; membrane component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|323976754|gb|EGB71842.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli TW10509] Length = 222 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 122/218 (55%), Gaps = 14/218 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ P+L+ + +L + S +++LI+ +I + ++ L+ Y+ +F GT Sbjct: 1 MLEYLPELM-KGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLV-RGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW + A+G+++K T+ I+LP S S+E + + KSTS+A TIT+ E+ + Sbjct: 119 EGQWQSCSALGMSKKDTL-AILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMGYS 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 Q + TY ++++ +YL++ ++ IE Sbjct: 178 QLLYGRTYD-VMVFGAAGIIYLVVNGLLTLMMRLIERK 214 >gi|154502490|ref|ZP_02039550.1| hypothetical protein RUMGNA_00303 [Ruminococcus gnavus ATCC 29149] gi|153796886|gb|EDN79306.1| hypothetical protein RUMGNA_00303 [Ruminococcus gnavus ATCC 29149] Length = 215 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/172 (34%), Positives = 101/172 (58%), Gaps = 10/172 (5%) Query: 29 CISFVISLIIGFFIAVIRIFFSD----TIISLIMHFYVWIFRGTPLLVQLFVIF---YGL 81 C+ F ++LI + ++ ++F IS I+ Y+ I RGTPL++QL V + Y L Sbjct: 18 CLIFFMTLIFSLPLGML-VYFGRVSRIKPISWIVKIYISIMRGTPLMLQLLVWYFAPYYL 76 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + I AI++ +LN++AY +EI RS I SIPKGQ++A+ +G +R QT I+L Sbjct: 77 WQMNIGGYKLTAILLGCSLNYAAYFAEIYRSGIESIPKGQYEAATLLGYSRGQTFFRIVL 136 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTYQPLII 191 PQ + +++E I+++K TS+ +++ E+F A++I + TT P I Sbjct: 137 PQMVKNVLPSVTNEVITLVKDTSLVYSLSYIEMFAVAKQIAAAQTTVLPFFI 188 >gi|329118127|ref|ZP_08246839.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Neisseria bacilliformis ATCC BAA-1200] gi|327465787|gb|EGF12060.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Neisseria bacilliformis ATCC BAA-1200] Length = 249 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/165 (35%), Positives = 94/165 (56%), Gaps = 26/165 (15%) Query: 61 YVWIFRGTPLLVQLFVIFY-GLP-----------------HIGIVFDSFVAIIISLTLNF 102 YV +FRGTPL VQ+F+ ++ LP + + + +A +++LT N Sbjct: 69 YVTVFRGTPLFVQIFIWYFVWLPALIHPADGWLVSGTAAVELRRNYGALIAGVLALTANS 128 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AYI+EI R+ I SI KGQ +A+ ++G+T Q +R +ILPQ + PL++EFI++LK Sbjct: 129 GAYITEIFRAGIQSIDKGQMEAARSLGMTYTQAMRFVILPQAVRRMLPPLANEFITLLKD 188 Query: 163 TSVASTITIPEIFQTAQRIVSTTY----QPLIIYCELAFVYLILT 203 +S+ S I + E+ QR +S Y +PL +A +YL +T Sbjct: 189 SSLLSAIAVAEL-AYVQRTISGRYTVYEEPLY---AIALIYLAMT 229 >gi|269964164|ref|ZP_06178461.1| arginine ABC transporter, permease protein [Vibrio harveyi 1DA3] gi|269831119|gb|EEZ85281.1| arginine ABC transporter, permease protein [Vibrio harveyi 1DA3] Length = 222 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 90/163 (55%), Gaps = 10/163 (6%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSI 114 +F GTPLLVQ+F+++YG V +S + +++L LN +AY +++ + + Sbjct: 55 LFTGTPLLVQIFLVYYGPGQFDAVRESVLWTWLSQPWFCAMLALALNTAAYSTQLFKGAF 114 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IP GQW A A+G+ + T++ ++LP I + S+E I + K TS+ASTITI ++ Sbjct: 115 NAIPSGQWQACRALGMNKTATLK-VLLPYAIRRAVPAYSNEVILVFKGTSLASTITIMDL 173 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 AQRI + TY L ++ YL + +I ++E Sbjct: 174 MGYAQRINAQTYDTLTVFGIAGAFYLTVNGVLTLIFRQVEKKA 216 >gi|255029025|ref|ZP_05300976.1| amino acid ABC transporter, permease protein [Listeria monocytogenes LO28] Length = 149 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 44/131 (33%), Positives = 85/131 (64%) Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 Q+F++F+G IG+ +FV+ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+T+ Sbjct: 1 QIFIVFFGTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQ 60 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 ++R+IILPQ + L +EF++++K +S+ S I + E+ + +++P I Sbjct: 61 GASMRYIILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPL 120 Query: 193 CELAFVYLILT 203 + +Y +LT Sbjct: 121 IITSLIYFVLT 131 >gi|218662377|ref|ZP_03518307.1| probable amino acid ABC transporter, permease protein [Rhizobium etli IE4771] Length = 352 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 107/184 (58%), Gaps = 12/184 (6%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P+ L+ + VTL + IS V I+ +A+ R+ + ++ + Y++ FRGTPLL Q Sbjct: 67 PRYLHG-LWVTLSLVAISVVCGAILSLPLAMARLS-KNRALNWFAYCYIYFFRGTPLLAQ 124 Query: 74 LFVIFYGL----PH---IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 LF+++YGL P IGI + +++ + ++T+N +AY +EI+R +I S+P GQ + Sbjct: 125 LFLVYYGLGVFRPQLEAIGIWWFFREAWYCGLFAMTINTAAYQAEILRGAIESVPHGQHE 184 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+G+ + R IILPQ + P +E I ++K ++V + IT+ ++ + S Sbjct: 185 AAAALGIHKAIAFRKIILPQAFIVALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFS 244 Query: 184 TTYQ 187 T++ Sbjct: 245 RTFR 248 >gi|121604957|ref|YP_982286.1| polar amino acid ABC transporter inner membrane subunit [Polaromonas naphthalenivorans CJ2] gi|120593926|gb|ABM37365.1| amino acid ABC transporter membrane protein, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 255 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/229 (27%), Positives = 116/229 (50%), Gaps = 28/229 (12%) Query: 3 YEWFNL-IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS-----DTIISL 56 + WF I+ + L + + +T+ + I V +G + + R+ + + Sbjct: 7 FGWFRADIVSQYATLFWHGLQMTIAVTLICIVQGTALGLAVGLARVAEARHSPAKQLCKY 66 Query: 57 IMHF----YVWIFRGTPLLVQLFVIFYGL------PHIGIV------------FDSFVAI 94 ++ + YV FRGTPL VQ+ +I + + P G++ + +F++ Sbjct: 67 LLRWPAAVYVSFFRGTPLFVQILLIHFAVLPLFINPSDGLLISGEAARDLKQNYGAFLSG 126 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 +++LTLN AYISEI R+ I SI KGQ +AS ++G++ +T+ HI+LPQ PL + Sbjct: 127 VVALTLNSGAYISEIFRAGIQSIDKGQVEASRSLGMSFPRTMYHIVLPQAFRRMLPPLGN 186 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 IS+LK +S+ S I + E+ A+ + + Y ++ +Y +LT Sbjct: 187 NAISLLKDSSLISAIGLAELAYAARTVAGAYSRYWEPYLTISLMYWVLT 235 >gi|304395668|ref|ZP_07377551.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304356962|gb|EFM21326.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 246 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 105/180 (58%), Gaps = 14/180 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++C +++I+ +G F ++R + ++S I YV +FR PL+VQ F Sbjct: 25 LWSGFQVTIAVSCCAWIIAFCVGSFFGILRTV-PNRLLSTIGTCYVELFRNIPLIVQFFF 83 Query: 77 IFYGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + P ++G+ F S F++ +I L L +A + E +R++I S+P GQ + Sbjct: 84 WYLVAPELVGENLGMWFKSELDPNIQFFLSSMICLGLFTAARVCEQVRAAIQSLPSGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 >gi|238763901|ref|ZP_04624858.1| Histidine transport system permease protein hisQ [Yersinia kristensenii ATCC 33638] gi|238697869|gb|EEP90629.1| Histidine transport system permease protein hisQ [Yersinia kristensenii ATCC 33638] Length = 228 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/229 (27%), Positives = 117/229 (51%), Gaps = 15/229 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D + +L++ +VTL +A S ++S+IIG A ++ S+ ++S + Y + RG Sbjct: 1 MLDGYSKLIFEGALVTLELALCSVLLSVIIGLIGAGGKLS-SNRLLSGLFECYTTLIRGV 59 Query: 69 PLLVQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 P LV + +IFYGL +G I D A II+L + AY +E R + +++ Sbjct: 60 PDLVLMLLIFYGLQIVLNSITESLGFEQINIDPLSAGIITLGFIYGAYFTETFRGAYMAV 119 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +A+ A G + Q R I+ P + + + + + ILK+T++ S + + ++ + Sbjct: 120 PVGQIEAARAFGFSSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKA 179 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 Q TYQP VYLI T+ + + +E ++++ V + Sbjct: 180 TQLAGKGTYQPFFFALVAGVVYLIFTTISNGVLLWLER---RYSHGVKR 225 >gi|107021747|ref|YP_620074.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116688693|ref|YP_834316.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|170731990|ref|YP_001763937.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|254246321|ref|ZP_04939642.1| ABC-type arginine transport system, permease component [Burkholderia cenocepacia PC184] gi|105891936|gb|ABF75101.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC transporter membrane protein [Burkholderia cenocepacia AU 1054] gi|116646782|gb|ABK07423.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein [Burkholderia cenocepacia HI2424] gi|124871097|gb|EAY62813.1| ABC-type arginine transport system, permease component [Burkholderia cenocepacia PC184] gi|169815232|gb|ACA89815.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 246 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/185 (34%), Positives = 103/185 (55%), Gaps = 17/185 (9%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ +++VI+LI+G V+R + ++ I YV IFR PL+VQ FV Sbjct: 26 LMSGFWVTIEVSLVAWVIALIVGSLFGVLRTV-PNKWLAAIGTVYVSIFRNIPLIVQFFV 84 Query: 77 IFYGLPHI--------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + +P + G F F A I+ L L A + E +RS I ++PKGQ Sbjct: 85 WYLVIPELLPASIGTWIKQLPPGTQF--FTASIVCLGLFTGARVCEQVRSGINALPKGQR 142 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 143 AAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLV 202 Query: 183 STTYQ 187 T Q Sbjct: 203 DYTAQ 207 >gi|330900315|gb|EGH31734.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] Length = 175 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 46/121 (38%), Positives = 76/121 (62%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + ++ YV + R TP+LV + +I++ LP +GI D + I++L+L AY++E+ R+ Sbjct: 53 LRIVASIYVTVVRNTPILVLILLIYFALPGLGIRLDKLASFIVTLSLYAGAYLTEVFRAG 112 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++SI KGQ +A AIGL Q +II+P + LS+ FIS+ K TS+A+ I +PE Sbjct: 113 LLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPE 172 Query: 174 I 174 + Sbjct: 173 L 173 >gi|28869033|ref|NP_791652.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28852273|gb|AAO55347.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 232 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 113/207 (54%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +N+I DS P L + ++ TL + IS L+ + ++R+ +++ Y ++ Sbjct: 5 YNVIWDSLP-LYFGGLLTTLKLLAISLAFGLLAALPLGLMRVS-KKPWVNVPAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +SF+ ++ +N SAY +EII S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFAAVRESFLWPWLSSATFCACLAFAINTSAYTAEIIAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G+++ + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPAGEIEAARAMGMSKVKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + + Y P Y YL LT Sbjct: 183 AARTVNAQFYLPFEAYVTAGVFYLCLT 209 >gi|293606209|ref|ZP_06688572.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292815356|gb|EFF74474.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 217 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 51/158 (32%), Positives = 90/158 (56%), Gaps = 4/158 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV +FRGT LVQLF ++ LP G+ + + I+ L LN AY +E++R +I ++P G Sbjct: 58 YVEVFRGTSALVQLFWFYFVLPLFGVQLPAMLVGIVVLALNAGAYGAEVVRGAIRAVPPG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A+ LTR Q +R I++PQ + P + I ++K+T++ S ITI ++ Q Sbjct: 118 QREAGVALNLTRAQIMRRIVVPQAVPAMLPPAGNLLIELMKNTALVSLITITDLTFRGQL 177 Query: 181 IVSTTYQPLIIYCELAFVY----LILTSFCYIIQIKIE 214 + S T + I+ + +Y L++T+ ++ ++ Sbjct: 178 LRSETLRTTEIFTLMLLMYFAVALVITAGVRALERRVR 215 >gi|153011888|ref|YP_001373101.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151563776|gb|ABS17272.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 222 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 116/203 (57%), Gaps = 11/203 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHFYV 62 F +++++P LL + +TL + + +I L+ GF +A++ RI I I FY+ Sbjct: 6 FFFVLNAWPALL-EGLKITLQLTVWANIIGLVAGFPLALLSNARI----APIRWIARFYI 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDS--FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +FR TP+LVQ+ F+ +P I V+ S F+ ++I L +N +A+ E R++I SIP Sbjct: 61 DLFRCTPVLVQVVWFFFCIPMIFEVWWSPVFMGVLI-LGMNQTAFNGEAFRAAIQSIPAA 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q DA A+GL R R+I+LPQ I T+ L + I I + +S+ + + + ++ ++ Sbjct: 120 QRDAGVALGLGRWNYTRYIVLPQAIRTATPVLITNAIGIFQQSSLVALVGVADLMYQGKQ 179 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + + TY+P+ + LA YL++ Sbjct: 180 LSTQTYRPIETFTFLAAFYLVVA 202 >gi|161520629|ref|YP_001584056.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189353185|ref|YP_001948812.1| ABC-type polar amino acid transport system ATPase component [Burkholderia multivorans ATCC 17616] gi|160344679|gb|ABX17764.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189337207|dbj|BAG46276.1| ABC-type polar amino acid transport system ATPase component [Burkholderia multivorans ATCC 17616] Length = 500 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 61/182 (33%), Positives = 101/182 (55%), Gaps = 8/182 (4%) Query: 34 ISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVF 88 + +++GF +A+ R + Y+W FR PLLV L V Y LP + ++ Sbjct: 34 LGVLLGFPVALARQSHQPAL-KRAAAVYIWFFRSLPLLV-LLVFIYNLPQVFPATSTVLS 91 Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 D F A +I++ L+ +AY +EI R I+S+P+GQ +A A+G+ R I++PQ I + Sbjct: 92 DPFTAGLIAMVLSETAYFAEIHRGGILSVPRGQLEAGRALGIRFTGIQRMIVMPQVIRIA 151 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY-LILTSFCY 207 L++EFI+I+K TS+ S I++ EI QR+ + + +AF Y LI+T F Sbjct: 152 LPALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETMLAVAFYYVLIVTVFSR 211 Query: 208 II 209 ++ Sbjct: 212 LL 213 >gi|269968080|ref|ZP_06182117.1| arginine ABC transporter, permease protein [Vibrio alginolyticus 40B] gi|269827326|gb|EEZ81623.1| arginine ABC transporter, permease protein [Vibrio alginolyticus 40B] Length = 222 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 90/163 (55%), Gaps = 10/163 (6%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSI 114 +F GTPLLVQ+F+++YG V +S + +++L LN +AY +++ + + Sbjct: 55 LFTGTPLLVQIFLVYYGPGQFDAVRESVFWTWLSQPWFCAMLALALNTAAYSTQLFKGAF 114 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IP GQW A A+G+ + T++ ++LP I + S+E I + K TS+ASTITI ++ Sbjct: 115 NAIPSGQWQACRALGMNKTATLK-VLLPYAIRRAVPAYSNEVILVFKGTSLASTITIMDL 173 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 AQRI + TY L ++ YL + +I ++E Sbjct: 174 MGYAQRINAQTYDTLTVFGIAGAFYLTVNGVLTLIFRQVEKKA 216 >gi|227530174|ref|ZP_03960223.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] gi|227349927|gb|EEJ40218.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] Length = 212 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/176 (36%), Positives = 96/176 (54%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ V SLIIG F A++ I I+ LI YV +FR PLLV F +P Sbjct: 23 SLIALVGSLIIGTFFALLEIS-KYRIVRLIGSIYVEVFRNIPLLVIAMGFFLIIPMYITK 81 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 F A I LTL SA+I+E +R+ I S+ GQ + + A GLT Q +R+IILPQ Sbjct: 82 ISGFAAGTIGLTLYTSAFIAETVRAGINSVEGGQLEGALANGLTHGQAMRYIILPQAFRV 141 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++FI+++K++SV + + ++ I + T Q + Y + +YLI+T Sbjct: 142 VIPPLGNQFINLVKNSSVLAFVAGFDLMYEGNLIANDTLQTMPTYFIVGVLYLIIT 197 >gi|123443061|ref|YP_001007035.1| glutamine ABC transporter permease protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090022|emb|CAL12880.1| putative glutamine transport system permease [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 218 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 89/141 (63%), Gaps = 1/141 (0%) Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTP++VQ+ I++ LP + + D F A ++++ +N AYI+EI R +++SI G Sbjct: 61 LIRGTPIVVQVMFIYFALPMMMPVRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHNGFR 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A A+GL+++ T+R++I P + PL +++I +K TS+ I + E+ + Q I+ Sbjct: 121 EAGLALGLSKRDTLRYVIAPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEII 180 Query: 183 STTYQPLIIYCELAFVYLILT 203 + ++ + I+ +A +YLI+T Sbjct: 181 AGNFRAMEIWSAVAVIYLIIT 201 >gi|152998036|ref|YP_001342871.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas sp. MWYL1] gi|150838960|gb|ABR72936.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas sp. MWYL1] Length = 268 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 118/224 (52%), Gaps = 27/224 (12%) Query: 6 FNLIIDSFPQLLYAAI----VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 +N++ D Q + A+ + T+ + +F+++ +G IA+ F I+ FY Sbjct: 26 WNMVADESYQRIAGALSEGLLTTIGVTFTAFILASFLGLLIALAG-FSRHRILREFARFY 84 Query: 62 VWIFRGTPLLVQLFVI-FYGLPHIGIVFDSFVAI---------------------IISLT 99 V +FRG P+LV LF I F G P + +++ + I II+L Sbjct: 85 VEVFRGIPVLVLLFYIAFVGAPEMVKLYNWALQIPIEAGWIEEARTRDFTLLWRAIIALA 144 Query: 100 LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISI 159 +++SA+I+E+ R+ I + KGQ +A+ A+GL+ R I LPQ + PL ++ +++ Sbjct: 145 ISYSAFIAEVFRAGIQEVGKGQIEAAKALGLSNWHRFRLITLPQAMRKILPPLGNDLVAM 204 Query: 160 LKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +K +++ S + + +I Q + S+T+Q Y +AF+YL+LT Sbjct: 205 IKDSALVSVLGVQDITQLGKVFSSSTFQFFETYNVVAFMYLVLT 248 >gi|329910725|ref|ZP_08275366.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Oxalobacteraceae bacterium IMCC9480] gi|327546105|gb|EGF31168.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Oxalobacteraceae bacterium IMCC9480] Length = 221 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 74/122 (60%) Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL+QL+ +FY LP G+ + A ++ L L+++ Y++E+ R+ + S+P+GQW+A+ Sbjct: 67 RSTPLLIQLYFLFYVLPDYGLTMSALTAGMVGLALHYACYVAEVYRAGLDSVPRGQWEAA 126 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+ L R I+LPQ I L + I++ K T V S IT+ E+ A+ I S + Sbjct: 127 KAMSLGPWNVYRSIVLPQAIRPIVPALGNYLIAMFKDTPVLSAITVVELMLQAKNIGSQS 186 Query: 186 YQ 187 ++ Sbjct: 187 FR 188 >gi|91225769|ref|ZP_01260798.1| arginine ABC transporter, permease protein [Vibrio alginolyticus 12G01] gi|91189658|gb|EAS75933.1| arginine ABC transporter, permease protein [Vibrio alginolyticus 12G01] Length = 222 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 90/163 (55%), Gaps = 10/163 (6%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSI 114 +F GTPLLVQ+F+++YG V +S + +++L LN +AY +++ + + Sbjct: 55 LFTGTPLLVQIFLVYYGPGQFDAVRESVFWTWLSQPWFCAMLALALNTAAYSTQLFKGAF 114 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IP GQW A A+G+ + T++ ++LP I + S+E I + K TS+ASTITI ++ Sbjct: 115 NAIPSGQWQACRALGMNKTATLK-VLLPYAIRRAVPAYSNEVILVFKGTSLASTITIMDL 173 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 AQRI + TY L ++ YL + +I ++E Sbjct: 174 MGYAQRINAQTYDTLTVFGIAGAFYLAVNGVLTLIFRQVEKKA 216 >gi|260222555|emb|CBA32233.1| hypothetical protein Csp_D31110 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 227 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 6/203 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTI---ISLIMHF 60 F ++ +P LL + TL + ++ V +G A +R F +D + ++ Sbjct: 7 FGAVLAEWP-LLLTGVGWTLALTAVAVVAGTALGVGCAWVRARGFGADHAPRWLQAVVGG 65 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TP +VQLF IF+GLP G + A I++ +N AY +EIIR+ + + PKG Sbjct: 66 YVELIRNTPFIVQLFFIFFGLPAAGFKLSAETASFIAMVINLGAYATEIIRAGLEATPKG 125 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++ L R QT +++LP + L S+ + ++ +SV I+ E+ A Sbjct: 126 QIEAAVSLALNRLQTFTYVVLPPALKKIWPSLISQVVIVMLGSSVCGQISTKELSYAADL 185 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I S ++ + + VYL+L+ Sbjct: 186 IQSNNFRSFEAFMVVGAVYLLLS 208 >gi|260461849|ref|ZP_05810095.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|319785374|ref|YP_004144850.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|259032490|gb|EEW33755.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|317171262|gb|ADV14800.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 253 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 57/190 (30%), Positives = 107/190 (56%), Gaps = 2/190 (1%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L+ + +++ ++ +S I L +AV R+ S + + F + I R TP L+ +F Sbjct: 47 LIAQGLWLSIQLSILSTAIGLAAAIPLAVARVHGS-SFARIPAVFLIEIVRATPELMVIF 105 Query: 76 VIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +++G P I G D + A ++++++ ++Y++E+IR+ + S+ KGQW+A+ + GL Q Sbjct: 106 WVYFGAPAITGQPIDGWTAALVAMSIIAASYLAEVIRAGLYSVDKGQWEAAASTGLNNWQ 165 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + + IILPQ I+ L S+ I + K+TS+ S + + + F+ AQ S T+ P IY Sbjct: 166 SFKWIILPQAISNMMPALLSQVIMLFKTTSLVSMVGVIDFFRAAQITNSNTFSPYAIYTL 225 Query: 195 LAFVYLILTS 204 + Y I+ Sbjct: 226 VGIGYFIICG 235 >gi|163843977|ref|YP_001628381.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis ATCC 23445] gi|163674700|gb|ABY38811.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445] Length = 240 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 65/206 (31%), Positives = 113/206 (54%), Gaps = 3/206 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I D++ L +T+ IA ++ +I IA++ + + I Y+ F Sbjct: 5 FSVIFDNW-TLFARGTWLTIVIAIVAIATGFLISIPIALMALSHRRPL-RWISSAYIEWF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R P +V L++ FY LP +G+ + I+L S+Y +EIIR +I+++PKGQ +A+ Sbjct: 63 RNIPFIVVLYLFFYRLPFMGVRLPESIVGTIALAFFASSYFAEIIRGAILAVPKGQMEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 AIG++ Q + I+ PQT+ P ++ IS++K TSV STIT+ E+ I T Sbjct: 123 RAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETSVLSTITVAELTYQGLVIQGET 182 Query: 186 YQPLIIYCELAFVYLILTS-FCYIIQ 210 + P I+ A +Y ++T+ F Y++ Sbjct: 183 FAPFEIFLTTAAIYWMITAIFAYLMH 208 >gi|270261834|ref|ZP_06190106.1| transporter [Serratia odorifera 4Rx13] gi|270043710|gb|EFA16802.1| transporter [Serratia odorifera 4Rx13] Length = 240 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/199 (29%), Positives = 105/199 (52%), Gaps = 17/199 (8%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIF---FSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 V L + F++S++ G +AV+ + +S ++ + FR TPL +QL +I+ Sbjct: 21 VTGLALTAKLFLLSVVPGMLLAVLMAVGQVYGPRPLSWLIRCVTYFFRSTPLYLQLMLIY 80 Query: 79 YGLPHIGIV--------------FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 YGL +V D+ ++L LN SAY++E++ + + P+ +W A Sbjct: 81 YGLSQFDVVQLGWQNDQPFWLLFRDATFCATLALVLNTSAYVAELLAGMMGTFPRQEWVA 140 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A G+++ Q IR ++LP T+ L++E + +L +TS+AST+T+ +I A+ + Sbjct: 141 GEAFGMSQWQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTVTLLDITGVARAFYAA 200 Query: 185 TYQPLIIYCELAFVYLILT 203 TY P I + A +YL+ T Sbjct: 201 TYSPFIPFLMAAALYLLCT 219 >gi|114705498|ref|ZP_01438401.1| ABC transporter permease protein [Fulvimarina pelagi HTCC2506] gi|114538344|gb|EAU41465.1| ABC transporter permease protein [Fulvimarina pelagi HTCC2506] Length = 224 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 77/116 (66%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ +FR P+LV L +++Y LP +G+ +F + +LT+ SAY +EI R+ I ++P+G Sbjct: 63 YIDVFRAIPVLVWLVIVYYALPFLGVRLSAFASATTALTMISSAYTAEIYRAGIEAVPRG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 Q++A+ +IGL +R ++LPQ I PL++ I++LK T++AS + +P++ + Sbjct: 123 QFEAAQSIGLGSFDLMRDVVLPQAIRIVIPPLTNNSINVLKDTALASVVALPDLLK 178 >gi|302549236|ref|ZP_07301578.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces viridochromogenes DSM 40736] gi|302466854|gb|EFL29947.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces viridochromogenes DSM 40736] Length = 339 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 113/204 (55%), Gaps = 25/204 (12%) Query: 32 FVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF-----YGLPHIGI 86 V+ ++G +AV+R+ ++ ++S + +VWIFR TPLLVQL F Y +GI Sbjct: 104 MVLGFLLGIPLAVMRLS-ANPVLSTLSWGFVWIFRSTPLLVQLLFWFNIGALYPTLGLGI 162 Query: 87 VFD-SFVAI------------IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 F FV + +I LTL+ +AY +E++R I+S+ GQ +A+ A+G+ R Sbjct: 163 PFGPQFVTVKTVNLLGPALTAVIGLTLHEAAYAAEVVRGGILSVDSGQTEAAQALGIGRA 222 Query: 134 QTIRHIILPQTITTSAVPLSSE-FISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLI 190 +T+R I++PQ + S VP + I LK TS+ S + + ++ + Q + + TYQ PL+ Sbjct: 223 RTLRRIVVPQAM-RSIVPTAGNMLIGTLKGTSIVSVLAVHDLLYSVQLVYNQTYQVIPLL 281 Query: 191 IYCELAFVYLILTSFCYIIQIKIE 214 + L Y+ +T+ + Q +E Sbjct: 282 VVATL--WYIAVTTVLSVGQFYVE 303 >gi|121609554|ref|YP_997361.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121554194|gb|ABM58343.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 223 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 5/202 (2%) Query: 1 MKYEW-FNLIIDSFPQLLYAA-IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 M Y + F + + P+L A + V L +A I+ I L IG A+ R + Sbjct: 1 MDYTFQFGSVWAALPRLAQGAQLTVLLSLAAIA--IGLAIGVLCALARTS-RRAWLRWPA 57 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV R TP L+QLF+I++GL +G+ D A ++ +++N AY +EI+R+ I +I Sbjct: 58 AVYVESIRNTPFLIQLFLIYFGLASLGLRLDPIDAALVGMSINCGAYATEIVRAGIDAIA 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +A++A+G +RH+I+ + L+S+F+ ++ ++V STI++ E+ A Sbjct: 118 GGQLEAAHALGFPVPAIVRHVIVFPALRAVFPALASQFLLVMLGSAVVSTISVEELTGVA 177 Query: 179 QRIVSTTYQPLIIYCELAFVYL 200 I + ++P +Y + +YL Sbjct: 178 HLIETENFRPFEVYIVVTGIYL 199 >gi|238797418|ref|ZP_04640917.1| Histidine transport system permease protein hisM [Yersinia mollaretii ATCC 43969] gi|238718689|gb|EEQ10506.1| Histidine transport system permease protein hisM [Yersinia mollaretii ATCC 43969] Length = 227 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 66/196 (33%), Positives = 108/196 (55%), Gaps = 11/196 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S VI ++ +AV R+ I + + +IFRGTPL VQL V Sbjct: 9 FTGMAITLWLLISSVVIGGLLAIPLAVARVA-ERRWIRFPVWIFTYIFRGTPLYVQLLVF 67 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + I+ ++F I++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 68 YSGMYSLEIIRGNDLLNAFFRSGLNCTILALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 127 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G +R + R IILP + + S+E I +L ST++A T T+P+I + A+ I + TYQ Sbjct: 128 YGFSRFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDILKIARDINAATYQ 187 Query: 188 PLIIYCELAFVYLILT 203 P + A +YLI++ Sbjct: 188 PFYAFGIAAVLYLIIS 203 >gi|91781317|ref|YP_556524.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693977|gb|ABE37174.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] Length = 299 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 109/210 (51%), Gaps = 22/210 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F + + +++T+ + + + IG +A++R+ D +S YV + RG P LV Sbjct: 70 FSRDILEGVLMTIVLTVYAMATGVFIGIALALMRLS-DDWFLSGFARSYVTVMRGIPALV 128 Query: 73 QLFVIFYGL----PHIGIVFDSF--------------VAIIISLTLNFSAYISEIIRSSI 114 QL + +Y L PHIG A ++ L L AY++EI+RS I Sbjct: 129 QL-IFWYNLSAIFPHIGFSLPGLGSMFVDANKAITPMTAAVLGLGLCEGAYMAEIVRSGI 187 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 + I GQ +A+ A+GL+R Q + +ILPQ + P ++ I ++K TS+AS I+ E+ Sbjct: 188 LGIDAGQREAALAVGLSRAQAMLKVILPQALRIIVPPTGNQVIGMMKLTSLASVISFTEL 247 Query: 175 FQTAQRIVSTTYQ--PLIIYCELAFVYLIL 202 +AQ I + T++ PL+I L ++ L L Sbjct: 248 LTSAQLIFNRTFEVIPLLIVASLWYLALSL 277 >gi|68249725|ref|YP_248837.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae 86-028NP] gi|68057924|gb|AAX88177.1| arginine transport system permease protein [Haemophilus influenzae 86-028NP] Length = 221 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 118/218 (54%), Gaps = 10/218 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + F L++ A ++TL +A S ++ L + AV+ ++ + M +V + RG Sbjct: 1 MFSDFLSLMFTAALMTLGLAVCSLLLGLFLSLIFAVLE---ANRFVGKPMTVFVALLRGL 57 Query: 69 PLLVQLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 P ++ + ++++G L I F +F + +L+L F+AY S+ +R +I +IPKGQ Sbjct: 58 PEIIVVLLVYFGSTELVEILTGEYIEFGAFGCGVFALSLIFAAYASQTLRGAIQAIPKGQ 117 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W++ A+GL++ T HI++PQ + LS++++ +LK T++ S I + ++ A + Sbjct: 118 WESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLIHQADLM 177 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + T+QP Y A +YL +T + K+E T+ Sbjct: 178 NTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTR 215 >gi|302338915|ref|YP_003804121.1| polar amino acid ABC transporter inner membrane subunit [Spirochaeta smaragdinae DSM 11293] gi|301636100|gb|ADK81527.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 298 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/252 (27%), Positives = 127/252 (50%), Gaps = 33/252 (13%) Query: 1 MKYEW-FNLIIDSF--PQ-LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 M Y W + ++ SF P+ +L + T+ ++ S +I+ IG + V R+ + L Sbjct: 45 MHYRWNWKPVVASFFNPRGILLKGFLTTIRLSIWSSIIAFFIGTVVGVGRLV-RNRFFRL 103 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYG-----LPHIGI-----------------------VF 88 + YV + R P LV +F+ ++ L +GI Sbjct: 104 LSGLYVSLIRNLPPLVLVFIFYFFFSSQLLDPLGIDQAARNAAPLVQRLLSIFLSQPSRL 163 Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 +F++ +++L + +YI+EII+S I S+ +GQW+ASY++GL+ R IILPQ + Sbjct: 164 TAFLSAVVTLGIYEGSYIAEIIQSGIRSVDRGQWEASYSLGLSSFDRTRLIILPQAARNA 223 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 L+ +FIS +K +S+ S I+I E+ + ++TY+ L I+ + +Y +LT I Sbjct: 224 LPALTGQFISTMKDSSIVSVISIAELTFQGMELTASTYRTLEIWSAVTLLYFLLTFTASI 283 Query: 209 IQIKIESSVTQH 220 + +IES + + Sbjct: 284 LSSRIESGLRKR 295 >gi|229171424|ref|ZP_04299009.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus MM3] gi|228612128|gb|EEK69365.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus MM3] Length = 218 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 103/176 (58%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ + V R PL++ F+ ++ LP +GI Sbjct: 25 SVIALIGSFILGVILAVMRIA-PIRILNWLGAAIVEFVRNIPLVLIAFIFYFALPVVGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA +LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + +++LPQ + Sbjct: 84 LNGFVAGTATLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQAMYYVVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|315037816|ref|YP_004031384.1| glutamine ABC transporter permease [Lactobacillus amylovorus GRL 1112] gi|325956291|ref|YP_004286901.1| glutamine ABC transporter permease [Lactobacillus acidophilus 30SC] gi|312275949|gb|ADQ58589.1| glutamine ABC transporter permease [Lactobacillus amylovorus GRL 1112] gi|325332856|gb|ADZ06764.1| glutamine ABC transporter permease [Lactobacillus acidophilus 30SC] gi|327183110|gb|AEA31557.1| glutamine ABC transporter permease [Lactobacillus amylovorus GRL 1118] Length = 213 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 100/174 (57%), Gaps = 1/174 (0%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 I+ + SLI+G F A++++ +I Y+ IFR PLLV + + + +P + Sbjct: 25 IALIFSLILGVFFALLKVA-PPKFGRVIAKVYIAIFRNIPLLVIVMIFYLIVPRYIVKLS 83 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 F A I LTL SA+I+E +R+ I SI GQ + + + G+T Q +R++ILPQ + Sbjct: 84 GFQAGTIGLTLYTSAFIAETVRAGINSIGTGQMEGARSNGMTYTQAMRYVILPQAMKIVI 143 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++SV + + ++ AQ I +T+Q + Y + YLILT Sbjct: 144 PPLGNQFVNLVKNSSVLAFVAGFDLMYQAQLIAFSTFQTIDTYIIVGLFYLILT 197 >gi|311278731|ref|YP_003940962.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] gi|308747926|gb|ADO47678.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] Length = 228 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/225 (26%), Positives = 113/225 (50%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F Q+++ +VTL +A S V++++IG A ++ + ++LI Y + RG P L Sbjct: 4 GFSQVIFQGALVTLELAISSVVLAVLIGLAGAAAKLS-GNRGLALIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G+ D +A II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNTITDAMGMAQFDIDPMIAGIITLGFIYGAYFTETFRGAFLAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G T +QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTSRQTFRRILFPAMMRFALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T++P +YL+ T+ + + +E + D Sbjct: 183 AGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLLLERRYSVGVKRAD 227 >gi|49081976|gb|AAT50388.1| PA0890 [synthetic construct] Length = 233 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 117/207 (56%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I DS P L + ++VTL + IS +I L++ +A++R+ +++ Y ++ Sbjct: 5 FSVIWDSLP-LYFDGLLVTLKLLSISLLIGLLLAVPLALMRVS-KQPLVNFPAWLYTYVI 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIIS 116 RGTP+LVQLF+I+YGL V +S + ++ +N SAY +EI+ S+ + Sbjct: 63 RGTPMLVQLFLIYYGLAQFDAVRESALWPWLSNASFCACLAFAINTSAYTAEILAGSLKA 122 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 P G+ +A+ A+G++R + R I+LP + + S+E I +L++TS+AS +T+ +I Sbjct: 123 TPLGEIEAAKAMGMSRLKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLVDITG 182 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + S Y P + YL LT Sbjct: 183 AARTVYSQYYLPFEAFITAGLFYLCLT 209 >gi|238783036|ref|ZP_04627063.1| Binding-protein-dependent transport system inner membrane component [Yersinia bercovieri ATCC 43970] gi|238716037|gb|EEQ08022.1| Binding-protein-dependent transport system inner membrane component [Yersinia bercovieri ATCC 43970] Length = 245 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 110/200 (55%), Gaps = 23/200 (11%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ + L++ ++TL I+ + V S ++GF +A R + + M + +FR Sbjct: 10 LLAPQYLGWLWSGFLLTLWISACTVVASTLLGFLLAAARDSENRALQWFAMGYST-LFRN 68 Query: 68 TPLLVQLFVIFYG----LPH--------------IGIVFD----SFVAIIISLTLNFSAY 105 TPLL+QLF ++ LP +G+ + F+A I LTL +A+ Sbjct: 69 TPLLIQLFFWYFAASQLLPASWIPWLNSSHEITLLGLTLNWPSFEFLAGFIGLTLYSTAF 128 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 I+E +R+ I + KGQ A++A+GLT Q++RH++LPQ + + PL ++++I+K++S+ Sbjct: 129 IAEELRAGISGVAKGQKYAAHALGLTGWQSMRHVVLPQALKIAMPPLLGQYMNIIKNSSL 188 Query: 166 ASTITIPEIFQTAQRIVSTT 185 A I + E+ ++++ + T Sbjct: 189 AMAIGVAELSYASRQVETET 208 >gi|325978428|ref|YP_004288144.1| amino acid ABC transporter permease [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178356|emb|CBZ48400.1| amino acid ABC transporter, permease protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 227 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 102/182 (56%), Gaps = 1/182 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+V+T+ +A + +L++G I++I+ ++ ++S I Y+ + R TPLL+QL+ +++ Sbjct: 17 ALVLTIRLAFFGILGALVLGLLISLIK-YYKIPVLSQICQVYIELSRNTPLLIQLYFLYF 75 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP IGIV S + ++ L +Y++E RS + +I K Q++ +IGL Q ++ Sbjct: 76 GLPKIGIVLSSEMCAVVGLIFLGGSYMAESFRSGLEAISKTQYEVGLSIGLKPVQNFFYV 135 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I PQ + S L + I ++K TSV S + + ++ A+ ++ Y+ L Y Sbjct: 136 IFPQALAVSLPSLVANVIFLIKETSVFSIVALADLMYVAKDLIGLYYETDEALLMLVLAY 195 Query: 200 LI 201 LI Sbjct: 196 LI 197 >gi|239940213|ref|ZP_04692150.1| putative ABC transporter permease protein [Streptomyces roseosporus NRRL 15998] gi|239986701|ref|ZP_04707365.1| putative ABC transporter permease protein [Streptomyces roseosporus NRRL 11379] gi|291443643|ref|ZP_06583033.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998] gi|291346590|gb|EFE73494.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998] Length = 292 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 111/213 (52%), Gaps = 21/213 (9%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + + V+ +G +AV+R+ + ++ + YVW++R TP+LVQL F Sbjct: 83 LTLWLTAVVMVLGFALGALLAVLRLS-GNPVLQAVSWGYVWLYRSTPILVQLLFWF---- 137 Query: 83 HIGIVFDSFVAI------------IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 +IG ++ + + +I LTL+ +AY +E++R I+S+ +GQ +A+ ++GL Sbjct: 138 NIGALYPQILGVSTVSLLGPVAIAVIGLTLHEAAYAAEVVRGGILSVERGQIEAAQSLGL 197 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--P 188 + R I+LPQ + + P + I LK TS+ S I + ++ + Q + TYQ P Sbjct: 198 GPWRRFRRIVLPQAMRSIVPPAGNMLIGTLKGTSIVSIIAVQDLLYSVQLVYHRTYQVIP 257 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 L++ + Y +T+ I Q +E + T Sbjct: 258 LLLVATIW--YAAVTTLLSIGQRYVERYYARGT 288 >gi|66045741|ref|YP_235582.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63256448|gb|AAY37544.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] Length = 220 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 111/204 (54%), Gaps = 1/204 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 ++L++ + ++ + ++ +IG ++ + + L + YV + RGTP+ V + Sbjct: 16 EVLWSGFLTSIQCSALAIAAGTLIGMLAGLV-LTYGGFFARLPIRLYVDLIRGTPVFVLV 74 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +FY +P +G +F A I LTL +++SEI+R ++ +IP+GQ +A AIGL Q Sbjct: 75 LAVFYMVPALGWQISAFQAGAIGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFGQ 134 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 ++R+++LPQ + + I+K++++ S I + E+ + Q++++ T+ L Y Sbjct: 135 SLRYVLLPQAMRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLF 194 Query: 195 LAFVYLILTSFCYIIQIKIESSVT 218 F++ ++ ++ +IE V Sbjct: 195 AGFLFFLINYAIELLGRQIEKRVA 218 >gi|300715818|ref|YP_003740621.1| Polar amino acid ABC transporter inner membrane subunit [Erwinia billingiae Eb661] gi|299061654|emb|CAX58770.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia billingiae Eb661] Length = 324 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 100/186 (53%), Gaps = 23/186 (12%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFY------------GLPHIGIVFDSF------ 91 + ++ + Y+W FRGTPLLVQL IF+ G+P G +F S+ Sbjct: 102 DNRLMRGLSGLYIWFFRGTPLLVQL--IFWYNMSTLFPKITLGIPFDGPIFASWNTNDLI 159 Query: 92 ---VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 A I L LN +AY++EIIR+ + S+ GQ + + A G++R + +R II+PQ + + Sbjct: 160 TPLTAAIAGLALNEAAYMAEIIRAGLQSVDNGQVETTQAFGMSRARALRRIIIPQAMRSI 219 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 P ++ IS++K+TS+ S I + ++ + Q + + T++ + + YL +TS + Sbjct: 220 IPPTGNQLISMIKATSLVSVIAMGDLLYSVQSVYNRTFEVIPMLMVAVIWYLFITSILNV 279 Query: 209 IQIKIE 214 Q IE Sbjct: 280 GQSFIE 285 >gi|222150112|ref|YP_002551069.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221737094|gb|ACM38057.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 274 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 99/184 (53%), Gaps = 22/184 (11%) Query: 59 HFYVWIFRGTPLLVQLF-VIFYGLPHIGIVFDSFVAIIIS-------------------- 97 FY+ I RG P+LV LF V F G P ++++ A ++S Sbjct: 86 RFYIEIVRGIPVLVLLFYVAFVGAPGFVALYNTLTAPLVSTGWLEPLQVRDVSLMWRAIF 145 Query: 98 -LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF 156 L + +SA+I+EI R+ I SI KGQ +A+ ++GL R Q R +ILPQ I PLS++F Sbjct: 146 ALCIGYSAFIAEIFRAGIESIDKGQIEAAKSLGLNRTQRFRLVILPQAIRVIFPPLSNDF 205 Query: 157 ISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 ++++K +S+ S + + +I Q + S +++ Y +A++YLILT +I ++E Sbjct: 206 VAMVKDSSLVSVLGVADISQAGKIYASGSFRFFETYSIVAYIYLILTIGLSLILRRVEKR 265 Query: 217 VTQH 220 + Sbjct: 266 MRSR 269 >gi|158425495|ref|YP_001526787.1| putative ABC amino acid transporter permease/substrate-binding protein [Azorhizobium caulinodans ORS 571] gi|158332384|dbj|BAF89869.1| putative ABC amino acid transporter permease/substrate-binding protein [Azorhizobium caulinodans ORS 571] Length = 227 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 117/204 (57%), Gaps = 6/204 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT + +S V+SL+IG F A R+F S I+S + YV + R TP+LVQLF Sbjct: 22 LMGGLWVTCQVTLLSIVLSLLIGLFGAAFRLF-SVPILSQLTFGYVELVRNTPILVQLFF 80 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 IFYGLP IG+ F + ++ L+L AY E IR +++I KG +A++++ L+ +Q Sbjct: 81 IFYGLPAIGLGISQFWSGVLCLSLWAGAYQVENIRGGLLTIEKGLKEAAFSLSLSLRQYF 140 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 R + LP I TS + + IS+LK++S I + E+ A ++T ++ + ++ + Sbjct: 141 RLVALPLAIRTSLPSMLNTSISLLKNSSYLQAIGLAEMTFIAVDRIATDFRAVEMFTAIG 200 Query: 197 FVYLILTSFCYIIQIKIESSVTQH 220 +YL L +I + + +S+ +H Sbjct: 201 ALYLAL-----VIVLSLMTSIVEH 219 >gi|323141718|ref|ZP_08076592.1| ABC transporter, permease protein [Phascolarctobacterium sp. YIT 12067] gi|322413793|gb|EFY04638.1| ABC transporter, permease protein [Phascolarctobacterium sp. YIT 12067] Length = 264 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 62/213 (29%), Positives = 107/213 (50%), Gaps = 12/213 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR-IFFSDT--------- 52 + W ++ + +L VVTL +A + I IIG + VI+ I D Sbjct: 6 FGWVVYLLQQYGSVLLKGAVVTLLLAVVGTFIGCIIGLIVGVIQTIPLEDNDSKVKRTLV 65 Query: 53 -IISLIMHFYVWIFRGTPLLVQLFVIFYG-LPHIGIVFDSFVAIIISLTLNFSAYISEII 110 + ++ YV +FRGTP++VQ V++YG + I A + +++N AY++E + Sbjct: 66 RCLQRLLDAYVEVFRGTPMIVQAMVVYYGAMSLFDIDMSPLFAGFLVVSINTGAYMAETV 125 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R I S+ GQ +A+ AIG+ QT+R +ILPQ + L + I +K TSV + I+ Sbjct: 126 RGGIESVDPGQKEAAIAIGMDHIQTMRCVILPQALRNVMPQLGNNLIINIKDTSVLNVIS 185 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + E++ ++ Y+ I+ +Y I+T Sbjct: 186 VTELYFASKSAAGVYYKYFEIFFITCVIYFIMT 218 >gi|331008515|gb|EGH88571.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 220 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 111/204 (54%), Gaps = 1/204 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 ++L++ + ++ + ++ +IG ++ + + L + YV + RGTP+ V + Sbjct: 16 EVLWSGFLTSIQCSALAIAAGTLIGMLAGLV-LTYGGFFARLPIRLYVDLIRGTPVFVLV 74 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +FY +P +G +F A I LTL +++SEI+R ++ +IP+GQ +A AIGL Q Sbjct: 75 LAVFYMVPALGWQISAFQAGAIGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFGQ 134 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 ++R+++LPQ + + I+K++++ S I + E+ + Q++++ T+ L Y Sbjct: 135 SLRYVLLPQAMRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLF 194 Query: 195 LAFVYLILTSFCYIIQIKIESSVT 218 F++ ++ ++ +IE V Sbjct: 195 AGFLFFLINYAIELLGRQIEKRVA 218 >gi|46578805|ref|YP_009613.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|120603588|ref|YP_967988.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris DP4] gi|46448217|gb|AAS94872.1| amino acid ABC tranporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio vulgaris str. Hildenborough] gi|120563817|gb|ABM29561.1| amino acid ABC transporter membrane protein 2, PAAT family [Desulfovibrio vulgaris DP4] gi|311232668|gb|ADP85522.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris RCH1] Length = 224 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 115/215 (53%), Gaps = 9/215 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++ + + L ++++ +P A + + +I+G R+F + Y F Sbjct: 8 FGEMLPALNRGLITSMMLIVPSATLGLLFGIIVG----TGRVF-GPAWVRKAGDIYTATF 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG PL+VQL +I++GLP+IGI + F A ++ L +AY SE +R +++SI +GQ A+ Sbjct: 63 RGVPLVVQLMIIYFGLPNIGIYLEPFPAAVLGFVLCSAAYNSEYVRGALLSIRQGQLKAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G ++ +T+ I++PQ + + +E I ++K +S+A IT E+ + + + + Sbjct: 123 QALGFSKLKTVLFIVVPQAVRRALPGCGNEIIYLIKYSSLAYVITCIELTGEGKVVAARS 182 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ ++ + YL L + I ++E QH Sbjct: 183 FRFTEVFLFVGAYYLFLVTLASWILHRVE----QH 213 >gi|312114910|ref|YP_004012506.1| polar amino acid ABC transporter inner membrane protein [Rhodomicrobium vannielii ATCC 17100] gi|311220039|gb|ADP71407.1| polar amino acid ABC transporter, inner membrane subunit [Rhodomicrobium vannielii ATCC 17100] Length = 229 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 61/222 (27%), Positives = 116/222 (52%), Gaps = 12/222 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + + F + VTL +A S ++ L+I +A+ R + +S + Y ++ RGT Sbjct: 6 LFERFGPRMVEGFAVTLELAFGSVLLGLLIAAPVALGRAY-GGRALSGALFGYTYMMRGT 64 Query: 69 PLLVQLFVIFYG-------LPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLL QLF+++YG L G+ + D F +++ TLN +AY +EI+ ++ ++P Sbjct: 65 PLLAQLFLVYYGSAQFQTSLDAAGLWWLFRDPFYCSLLTFTLNTAAYQAEILAGAVRAVP 124 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+ A ++ R I+LPQ + PL +E I ++K++++AS +T+ ++ TA Sbjct: 125 RGQVEAAKAAAMSPALVARRIVLPQAARLALRPLGNELILMVKASALASVVTVYDLLATA 184 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + TY Y A VY++ + ++ + +H Sbjct: 185 KLAFQRTYD-FQAYIAAALVYVLTVEIIRRVWNMLDRRLNRH 225 >gi|257868424|ref|ZP_05648077.1| ABC-type amino acid transporter [Enterococcus gallinarum EG2] gi|257802588|gb|EEV31410.1| ABC-type amino acid transporter [Enterococcus gallinarum EG2] Length = 250 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 71/208 (34%), Positives = 122/208 (58%), Gaps = 10/208 (4%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++W L+ + FP++L +A+ VTL I ++ + L++G +A IR+ +S + +V Sbjct: 5 FQW-KLVWEYFPKVL-SALPVTLMIVAVASITGLLLGILLAFIRVE-KVPFLSQLAAVFV 61 Query: 63 WIFRGTPLLVQLFVIFYGLPH----IGIVFDSFVAII---ISLTLNFSAYISEIIRSSII 115 RGTP+LVQL+V++YG+P I I S+ II I+ LN +A+ SE R++I+ Sbjct: 62 SFIRGTPILVQLYVVYYGVPALLQMIQIDVSSWNKIIFIYITYGLNTAAFQSETFRAAIL 121 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+P Q +AS A GLT+ Q R +ILPQ + + + I++L+ TS+A TI + ++ Sbjct: 122 SVPVTQKEASIACGLTKTQMYRQVILPQVVRVALPAFGTTTIALLQDTSLAFTIGVVDVV 181 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ I + T+ L Y A +++ L+ Sbjct: 182 GKARAIGAVTFHTLEGYVGAAILFITLS 209 >gi|302186220|ref|ZP_07262893.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae 642] Length = 220 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 111/204 (54%), Gaps = 1/204 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 ++L++ + ++ + ++ +IG ++ + + L + YV + RGTP+ V + Sbjct: 16 EVLWSGFLTSIQCSALAIAAGTLIGMLAGLV-LTYGGFFARLPIRLYVDLIRGTPVFVLV 74 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +FY +P +G +F A I LTL +++SEI+R ++ +IP+GQ +A AIGL Q Sbjct: 75 LAVFYMVPALGWQISAFQAGAIGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLCFGQ 134 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 ++R+++LPQ + + I+K++++ S I + E+ + Q++++ T+ L Y Sbjct: 135 SLRYVLLPQAMRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLF 194 Query: 195 LAFVYLILTSFCYIIQIKIESSVT 218 F++ ++ ++ +IE V Sbjct: 195 AGFLFFLINYAIELLGRQIEKRVA 218 >gi|238749889|ref|ZP_04611393.1| Glutamine transport system permease protein glnP [Yersinia rohdei ATCC 43380] gi|238711818|gb|EEQ04032.1| Glutamine transport system permease protein glnP [Yersinia rohdei ATCC 43380] Length = 218 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 89/141 (63%), Gaps = 1/141 (0%) Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTP++VQ+ I++ LP + + D F A ++++ +N AYI+EI R +++SI G Sbjct: 61 LIRGTPIVVQVMFIYFALPMMMPMRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHNGFR 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A A+GL+++ T+R++I P + PL +++I +K TS+ I + E+ + Q I+ Sbjct: 121 EAGLALGLSKRDTLRYVIAPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEII 180 Query: 183 STTYQPLIIYCELAFVYLILT 203 + ++ + I+ +A +YLI+T Sbjct: 181 AGNFRAMEIWSAVAVIYLIIT 201 >gi|196230490|ref|ZP_03129352.1| polar amino acid ABC transporter, inner membrane subunit [Chthoniobacter flavus Ellin428] gi|196225420|gb|EDY19928.1| polar amino acid ABC transporter, inner membrane subunit [Chthoniobacter flavus Ellin428] Length = 247 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 71/208 (34%), Positives = 110/208 (52%), Gaps = 11/208 (5%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IM 58 + Y W S+ +L + T+ I+ ++ S +IG +A+ R I+ L + Sbjct: 28 LDYHWNWAQAASYWRLFLDGWLTTVGISALAIPFSCLIGMLLALAR---RAPIMPLRDAV 84 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIII-SLTLNF--SAYISEIIRSSII 115 +V + RGTPLLVQLF+ +Y G S + +I +LTL+F AYISEI R+ I Sbjct: 85 QIFVELTRGTPLLVQLFIYWYAF---GEKLSSDLRLIAGALTLSFFEGAYISEIFRAGIE 141 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 + Q + + ++G +R QT R++I P + S PL+ +F SI+K +S+ S + I E Sbjct: 142 GVGASQLETARSLGFSRVQTYRYVIFPLALRQSLPPLAGQFASIIKDSSLLSVLGIAEFS 201 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 A + S TY IY +A YLILT Sbjct: 202 LAATQTNSITYTTFEIYLPVALGYLILT 229 >gi|255527438|ref|ZP_05394311.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] gi|296187467|ref|ZP_06855862.1| ABC transporter, permease protein [Clostridium carboxidivorans P7] gi|255508884|gb|EET85251.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] gi|296047989|gb|EFG87428.1| ABC transporter, permease protein [Clostridium carboxidivorans P7] Length = 237 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/186 (33%), Positives = 101/186 (54%), Gaps = 16/186 (8%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH----IGIVFDSF---VAIIISLTLNF 102 + ++ I + Y RGTP L+QLF++FYGLP +GI + + V II+ LN Sbjct: 49 KNIVLKSIANGYTAFIRGTPALLQLFLVFYGLPQALSFVGIDINDWSKSVFAIITFALNS 108 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 A+ISEI+RS+ +S+ GQ +A+ +IG+ Q +R II+PQ L + IS+LK Sbjct: 109 GAFISEIMRSAYLSVDAGQSEAALSIGMNNVQCLRRIIIPQAFKICLPNLGNIIISLLKE 168 Query: 163 TSVASTITIPEIFQTAQRIVSTTY--QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TS TI + +I A+ I S Y + L + +A +Y ++I I IE ++ + Sbjct: 169 TSYVFTIGVVDILGKAKLIGSDGYGVRQLEAFLAVALIY-------WVISIVIEQFISLY 221 Query: 221 TYSVDK 226 + +K Sbjct: 222 EHMNNK 227 >gi|227496261|ref|ZP_03926557.1| amino acid ABC superfamily ATP binding cassette transporter permease protein [Actinomyces urogenitalis DSM 15434] gi|226834186|gb|EEH66569.1| amino acid ABC superfamily ATP binding cassette transporter permease protein [Actinomyces urogenitalis DSM 15434] Length = 285 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 114/218 (52%), Gaps = 28/218 (12%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+ TL + + +I +++ AV R + ++ + + YV+ FRGTP+ QL +F+ Sbjct: 29 AVGWTLALTVAAMLIGIVLAAATAVARQS-ENPVLRYVAYAYVFFFRGTPIYTQL--VFW 85 Query: 80 GL-P------HIGI-------------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 GL P +G+ VF VA I+ L LN AY+SEI+RS + S+ Sbjct: 86 GLLPALYNKLSLGVPFGPEFFVFSTKEVFSGAVAAILGLGLNEGAYLSEIMRSGLNSVDA 145 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP---EIFQ 176 GQ +A+ A+G++ +R IILPQ + P +E IS+LK+TS+ + +P E+ Sbjct: 146 GQREAASALGMSNGTILRRIILPQAMRVIVPPTGNETISMLKTTSL--VLAVPFTKELTF 203 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 A + + +QP+ + A YLI+TS + Q IE Sbjct: 204 VANNVGNRLFQPIPLLIVAALWYLIITSILMVGQHYIE 241 >gi|56962546|ref|YP_174272.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16] gi|56908784|dbj|BAD63311.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16] Length = 211 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 110/196 (56%), Gaps = 7/196 (3%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 ++ID + L + + TL + + V S ++G IAV+RI + +++ + YV FR Sbjct: 4 ILIDYWDAFL-SGFLQTLKASTYALVGSFVVGTLIAVMRIS-TIRVLNWLGTAYVEFFRN 61 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PLL+ +F+ + +G F A + L + SA+I+E IR+ I +IP GQ +A+ + Sbjct: 62 IPLLLTVFIFW-----LGFRLGGFEAGTLGLLIYTSAFIAEAIRAGIQAIPTGQMEAARS 116 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GLT Q +R +ILPQ I T PL ++ ++++K++S+ + + ++ I S T+ Sbjct: 117 SGLTYTQALRFVILPQAIKTVIPPLGNQTLNLVKNSSILAVVGGADLMYQGDIINSMTFS 176 Query: 188 PLIIYCELAFVYLILT 203 P +Y +A YL+LT Sbjct: 177 PYAVYGIVALFYLLLT 192 >gi|313141609|ref|ZP_07803802.1| L-cystine transport system permease protein tcyM [Helicobacter canadensis MIT 98-5491] gi|313130640|gb|EFR48257.1| L-cystine transport system permease protein tcyM [Helicobacter canadensis MIT 98-5491] Length = 215 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 62/194 (31%), Positives = 108/194 (55%), Gaps = 14/194 (7%) Query: 25 LPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI 84 + IA + F++ I+G +++IRI+ + L Y+ FRG P+LVQ+F+ +YG+P + Sbjct: 1 MAIAIVGFILGAILGLILSLIRIYRVPILFQL-ATLYISFFRGIPVLVQIFLAYYGIPLV 59 Query: 85 GIVFDSFVAIIISLT-------------LNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 F+ + I ++ L SAY+SEI RSSI+SI KGQ +A+Y++G+ Sbjct: 60 LRYFNHQYGLNIDISGIDAIYFMYLVYALYCSAYLSEIFRSSILSIDKGQLEAAYSVGMN 119 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 Q + IILPQ++ + + + FI ++K TS+ ++PEI A + + L + Sbjct: 120 TTQALFIIILPQSMLLALPNILNFFIILIKETSLVFAASVPEIMGIATLEADRSSKFLEV 179 Query: 192 YCELAFVYLILTSF 205 Y A +Y +++ F Sbjct: 180 YIIAALIYWVISIF 193 >gi|324112657|gb|EGC06633.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia fergusonii B253] gi|325496803|gb|EGC94662.1| arginine transporter permease subunit ArtM [Escherichia fergusonii ECD227] Length = 222 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 122/218 (55%), Gaps = 14/218 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ P+L+ + +L + S +++LI+ +I + ++ L+ Y+ +F GT Sbjct: 1 MLEYLPELM-KGLHTSLTLTIASLIVALILALIFTIILTLKTPVLVWLV-RGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW + A+G+++K T+ I+LP S S+E + + KSTS+A TIT+ E+ + Sbjct: 119 EGQWQSCSALGMSKKDTL-AILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMGYS 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 Q + TY ++++ +YL++ ++ IE Sbjct: 178 QLLYGRTYD-VMVFGAAGIIYLVVNGLLTLMMRLIERK 214 >gi|163856320|ref|YP_001630618.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella petrii DSM 12804] gi|163260048|emb|CAP42349.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella petrii] Length = 217 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 47/139 (33%), Positives = 85/139 (61%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RG P++V LF I++ +P +GI + A II L + +SAY +E R+ I +I +GQ + Sbjct: 61 VLRGIPIIVLLFYIYFVMPDMGIALTAVQAAIIGLGIAYSAYQAENFRAGIEAIDRGQVE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+G++ T+R ++LPQ + P + I +LK +S ASTIT+ E+ + I Sbjct: 121 AAMAMGMSWSMTMRRVVLPQAVKIVLPPYGNIMIMMLKDSSQASTITVAELALQGKLIAV 180 Query: 184 TTYQPLIIYCELAFVYLIL 202 +T++ ++ +A +YL++ Sbjct: 181 STFKNATVFSLVALMYLVM 199 >gi|218234515|ref|YP_002365437.1| amino acid ABC transporter, permease protein [Bacillus cereus B4264] gi|229148979|ref|ZP_04277224.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus m1550] gi|218162472|gb|ACK62464.1| amino acid ABC transporter, permease protein [Bacillus cereus B4264] gi|228634519|gb|EEK91103.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus m1550] Length = 218 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 103/176 (58%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+RI I++ + V R PL++ F+ ++ LP +GI Sbjct: 25 SVIALIGSFILGVILAVMRIA-PIRILNWLGAAIVEFVRNIPLVLIAFIFYFALPVVGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA +LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + +++LPQ + Sbjct: 84 LNGFVAGTATLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYVQAMYYVVLPQAVKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|254253238|ref|ZP_04946556.1| ABC-type amino acid transport system permease component [Burkholderia dolosa AUO158] gi|124895847|gb|EAY69727.1| ABC-type amino acid transport system permease component [Burkholderia dolosa AUO158] Length = 246 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/185 (34%), Positives = 103/185 (55%), Gaps = 17/185 (9%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ +++VI+LI+G V+R + ++ I YV IFR PL+VQ F+ Sbjct: 26 LMSGFWVTIEVSLVAWVIALIVGSLFGVLRTV-PNKWLAAIGTVYVSIFRNVPLIVQFFI 84 Query: 77 IFYGLPHI--------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + +P + G F F A I+ L L A + E +RS I ++PKGQ Sbjct: 85 WYLVVPELLPASVGTWIKQLPPGTQF--FTASIVCLGLFTGARVCEQVRSGINALPKGQR 142 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 143 AAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLV 202 Query: 183 STTYQ 187 T Q Sbjct: 203 DYTAQ 207 >gi|89899055|ref|YP_521526.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89343792|gb|ABD67995.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 216 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 119/207 (57%), Gaps = 5/207 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M E + I +P +L I VTL ++ I V +IGF + + R S ++SL++ Sbjct: 3 MFLEQIHGIAQYYPVIL-KGIGVTLALSFIGIVAGTLIGFVLGIGRAS-SHKLLSLVVGA 60 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y IFRGTP+LVQ+FV+F+ LP GI DSF A ++L+ + +ISEI+ S I ++P G Sbjct: 61 YTDIFRGTPVLVQVFVVFFILPEAGIELDSFTAGALALSNIAACFISEIVASGIRAVPIG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ + GLTR Q +R +++PQ L +F+ ++K +SV S I + ++ ++ Sbjct: 121 QVEAAASAGLTRLQQLRLVVMPQATRMIVPSLVGQFVLLVKDSSVVSAIGLLDLTRSGWI 180 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCY 207 IV + ++++ + Y ++ CY Sbjct: 181 IVQSVPNGMLVFSVVGIGYFLI---CY 204 >gi|239627706|ref|ZP_04670737.1| amino acid ABC transporter [Clostridiales bacterium 1_7_47_FAA] gi|239517852|gb|EEQ57718.1| amino acid ABC transporter [Clostridiales bacterium 1_7_47FAA] Length = 267 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 104/211 (49%), Gaps = 12/211 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-----------IISL 56 ++ + + + V++ IA + ++ IIGF + +++ S II L Sbjct: 11 VVFNKYGMSMLQGAGVSMRIALVGTLVGCIIGFAVGIVQTIPSAKGDNPVKRVLLWIIKL 70 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 I++ YV FRGTP++ Q I++GL P +GI + A L++N AY++E +R I+ Sbjct: 71 ILNAYVEFFRGTPMMAQAMFIYFGLLPLLGIDMSMWGAANFILSINTGAYMAETVRGGIL 130 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SI GQ + + +IG+T QT+ ++ILPQ + + + I +K + V S I + E+ Sbjct: 131 SIDPGQTEGAKSIGMTHVQTMIYVILPQALRNIMPQIGNNLIINIKDSCVLSVIGVTELL 190 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFC 206 + Y Y +Y I+T C Sbjct: 191 YKTKAAAGALYMNFETYTITMIMYFIMTFTC 221 >gi|119387393|ref|YP_918427.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119377968|gb|ABL72731.1| amino acid ABC transporter membrane protein 1, PAAT family [Paracoccus denitrificans PD1222] Length = 226 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 112/203 (55%), Gaps = 3/203 (1%) Query: 3 YEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 YE+ F+ + D P L++ I +T+ + S + ++G +AV R+ + I Y Sbjct: 2 YEFDFSFLNDYMPDLIHG-IWLTIGMTVASILPGFVLGTAVAVARLR-GRPWVKRIATVY 59 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V R TPL++Q+F +F+GL + + F A +I+L +N AY +EI+R+ SIP+GQ Sbjct: 60 VEAIRNTPLIIQVFWLFFGLAALQVHIGPFAAAVIALVINVGAYTAEIMRAGFQSIPRGQ 119 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ + L+ Q++ I +PQ + L S+F+ ++ +TS+ S I+ E+ A I Sbjct: 120 LEAADCLALSPFQSLIQIEVPQAVERVYPALVSQFVLMMLATSIMSQISAEELTGVAYMI 179 Query: 182 VSTTYQPLIIYCELAFVYLILTS 204 S T++ +Y +A YL L S Sbjct: 180 QSFTFRGFEVYLVIAVFYLGLAS 202 >gi|148379377|ref|YP_001253918.1| amino acid ABC transporter permease [Clostridium botulinum A str. ATCC 3502] gi|153933606|ref|YP_001383753.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A str. ATCC 19397] gi|153935113|ref|YP_001387303.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A str. Hall] gi|148288861|emb|CAL82945.1| putative ABC transporter, membrane protein [Clostridium botulinum A str. ATCC 3502] gi|152929650|gb|ABS35150.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A str. ATCC 19397] gi|152931027|gb|ABS36526.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A str. Hall] Length = 221 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 49/132 (37%), Positives = 83/132 (62%), Gaps = 7/132 (5%) Query: 62 VWI--FRGTPLLVQLFVIFYGL----PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 +W+ FRGTPL+ QLF +++G+ P + + D+ II L N SAY+SE +R +I Sbjct: 57 IWVSFFRGTPLIAQLFFLYFGIVQLIPSLKNM-DAMTVAIIGLGFNASAYMSETLRGAIS 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ KGQ +AS +IG+T Q+++ I+ PQ + LS+ F+ I+K +++A T+ + EI Sbjct: 116 SVDKGQIEASLSIGMTPIQSMKRIVFPQAARVALPALSNSFVDIIKGSALAFTLGVVEIM 175 Query: 176 QTAQRIVSTTYQ 187 AQ +++Y+ Sbjct: 176 AVAQSEGASSYR 187 >gi|319639192|ref|ZP_07993943.1| amino acid ABC transporter [Neisseria mucosa C102] gi|317399376|gb|EFV80046.1| amino acid ABC transporter [Neisseria mucosa C102] Length = 248 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 65/191 (34%), Positives = 105/191 (54%), Gaps = 27/191 (14%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVI------FYGLPHIGIV------------FDSFVAI 94 ++ I +YV +FRGTPL VQ+ + F+ P G++ + + +A Sbjct: 61 VLRKISFWYVTLFRGTPLFVQIVIWAYVWFPFFVHPADGVLISGEAAVDLRRSYGALIAG 120 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 ++L N AYI EI R+ I SI KGQ +A+ ++GLT Q +R++ILPQ + PL+S Sbjct: 121 SLALVANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYTQAMRYVILPQALRRMLPPLAS 180 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE----LAFVYLILTSFCYIIQ 210 EFI++LK +S+ S I + E+ Q ++ Y +Y E +A +YL+LTS + Sbjct: 181 EFITLLKDSSLLSVIGVAEL-AYVQSTITGRYS---VYEEPLYTIALIYLVLTSVLGWVF 236 Query: 211 IKIESSVT-QH 220 +++ES QH Sbjct: 237 LRLESRYNPQH 247 >gi|311280248|ref|YP_003942479.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] gi|308749443|gb|ADO49195.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] Length = 222 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 120/218 (55%), Gaps = 14/218 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ P+L+ + +L + S V++LI+ +I + ++ I+ Y+ +F GT Sbjct: 1 MLEYLPELM-KGLHTSLTLTVASIVVALILALIFTII-LTLKTPVLVWIVRGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPSLQEYPVLWHLLSEPWLCAMIALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQW + A+G+++K T+ I+LP + S+E + + KSTS+A TIT+ E+ Sbjct: 119 DGQWQSCGALGMSKKDTL-AILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 Q + TY ++++ +YLI+ ++ IE Sbjct: 178 QLLYGRTYD-VMVFGAAGVIYLIVNGLLTLLMRLIERK 214 >gi|91777480|ref|YP_552688.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91690140|gb|ABE33338.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia xenovorans LB400] Length = 227 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 47/128 (36%), Positives = 76/128 (59%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y+ RGTP LVQLFV+F+ LP IG+ +A ++L LN AY +EI+R ++ I Sbjct: 55 RLYISFMRGTPALVQLFVLFFALPLIGLGGRPMLAAALTLGLNSGAYTAEILRGNLRVIT 114 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ++A+ A+G+ + I +PQ + S L +EF +LK+T +AS + + E+ Sbjct: 115 PGQYEAAIALGMAPSRIALRIAMPQMLKASLPALINEFTILLKTTPLASVVAVTELTYAG 174 Query: 179 QRIVSTTY 186 Q +++ TY Sbjct: 175 QMVIARTY 182 >gi|332283288|ref|YP_004415199.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Pusillimonas sp. T7-7] gi|330427241|gb|AEC18575.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Pusillimonas sp. T7-7] Length = 279 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 52/153 (33%), Positives = 93/153 (60%), Gaps = 1/153 (0%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRS 112 +S + Y+ + RGTP++VQ+ I++ LP I G D+ +A I +L +N AYISEI+R Sbjct: 112 LSFLAQVYILVIRGTPIVVQVMFIYFALPLIFGWRIDAVLAAIFTLVINSGAYISEIVRG 171 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +++S+PKG +A A+GL + + +II P + + ++ I LK +S+ I + Sbjct: 172 ALLSVPKGLKEAGQAMGLPFYKILAYIIGPVALRRMIPAMGNQCIISLKDSSLFIVIGVA 231 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSF 205 E+ + Q I+++ ++ + I+ +A +YLILT F Sbjct: 232 ELTRQGQEIIASNFRSVEIWGAVAVLYLILTGF 264 >gi|301300302|ref|ZP_07206510.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852105|gb|EFK79781.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 485 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/188 (34%), Positives = 105/188 (55%), Gaps = 10/188 (5%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSF 91 + +IIGF + VI F+ I + + ++IFRG PLLV I+ G+P + G +F Sbjct: 303 IFGIIIGF-LGVIPNKFAQGISTTV----IYIFRGLPLLVLALFIYNGIPSLTGTKIPAF 357 Query: 92 VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP 151 +A II+LTLN AY + ++ I ++ KGQ +A+ ++GL+ + ++ IILPQ I Sbjct: 358 IAGIITLTLNEGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKAMKKIILPQGIKIMVPS 417 Query: 152 LSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI----LTSFCY 207 ++FI LK TS+ S I I E+ QT + I++ + ++ + +YLI LT Sbjct: 418 FVNQFIITLKDTSILSIIGILELTQTGKIIIARNLEGFKVWAIIGLMYLIVITVLTWISN 477 Query: 208 IIQIKIES 215 +Q K+ S Sbjct: 478 YLQKKMNS 485 >gi|260464193|ref|ZP_05812386.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259029996|gb|EEW31279.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 269 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 93/169 (55%), Gaps = 22/169 (13%) Query: 57 IMHFYVWIFRGTPLLVQLF-VIFYGLPHIGIVFDSFVA---------------------I 94 I FYV I RG P+LV LF + F G P +++ A Sbjct: 81 IARFYVEIIRGVPILVLLFWIAFAGAPAFVAAWNALTAPLQNAGLFGELLVRDVSLLWRA 140 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 +++LT+ +SA+ISE+ R+ I ++ KGQ +A+ A+GL+R Q R I+ PQ I T PL + Sbjct: 141 VMALTIGYSAFISEVFRAGIQAVEKGQIEAAKALGLSRAQRFRLIVFPQAIRTILPPLGN 200 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +F++++K +S+ S + + +I Q + + +++ Y A++YLILT Sbjct: 201 DFVALVKDSSLVSVLGVADITQMGKVYAAGSFRFFETYSITAYIYLILT 249 >gi|229844866|ref|ZP_04465004.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae 6P18H1] gi|229812247|gb|EEP47938.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae 6P18H1] Length = 221 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 119/224 (53%), Gaps = 10/224 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + F L++ A ++TL +A S ++ L + AV+ ++ + M +V + RG Sbjct: 1 MFSDFLSLMFTAALMTLGLAVCSLLLGLFLSLIFAVLE---ANRFVGKPMTVFVALLRGL 57 Query: 69 PLLVQLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 P ++ + ++++G L I F +F + +L+L F+AY S+ +R +I +IP GQ Sbjct: 58 PEIIVVLLVYFGSTELVEMLTGEYIEFGAFGCGVFALSLIFAAYASQTLRGAIQAIPTGQ 117 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W++ A+GL++ T HI++PQ + LS++++ +LK T++ S I + ++ + A I Sbjct: 118 WESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLMRQADLI 177 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + T+QP Y A +YL +T + K+E T+ V Sbjct: 178 NTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFERGVK 221 >gi|189423783|ref|YP_001950960.1| polar amino acid ABC transporter inner membrane protein [Geobacter lovleyi SZ] gi|189420042|gb|ACD94440.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter lovleyi SZ] Length = 755 Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 58/197 (29%), Positives = 103/197 (52%), Gaps = 2/197 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+I + L+ + T+ I+ + + ++G I +R+ S ++S Y+ I R Sbjct: 535 NIIHERRYLLILDGLKTTVVISVFATLFGTLLGALICFMRMAKS-RLLSAPARLYIAILR 593 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTP+LV L +IFY + I + + +I+ +NF AY +EI R+ I + KGQ +A Sbjct: 594 GTPVLVLLMLIFY-VVFASININPVIVAVIAFGMNFGAYTAEIFRTGIEGVEKGQTEAGI 652 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G TR T HI+LPQ + EFIS++K TS+ I + ++ + + I S T+ Sbjct: 653 SLGFTRTSTFLHIVLPQMVRRILPVYKGEFISLVKMTSIVGYIAVQDLTKASDIIRSRTF 712 Query: 187 QPLIIYCELAFVYLILT 203 +A +Y +++ Sbjct: 713 DAFFPLVMVAILYFLIS 729 >gi|56961809|ref|YP_173531.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16] gi|56908043|dbj|BAD62570.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16] Length = 212 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 56/159 (35%), Positives = 88/159 (55%), Gaps = 2/159 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ + T+ I + + I+G ++R+ + I +V RGTPLL Q+F Sbjct: 9 LWEGLKYTVLITLVGVFLGSIVGSIFGLMRLS-RIGFVRAIAAIFVEAIRGTPLLAQIFF 67 Query: 77 IFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I +G+P + + FD I + +N AYI+EI+R + SI KGQ +A ++GLT QT Sbjct: 68 IHFGIPGLLDLRFDPLYTGIFVIAINSGAYIAEIVRGGVQSIDKGQMEAGRSLGLTGSQT 127 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +R+II PQ I P ++FI LK TS+ STI + ++ Sbjct: 128 MRYIIWPQAIKVMIPPFGNQFIISLKDTSLLSTIAVADL 166 >gi|238798473|ref|ZP_04641953.1| Glutamine transport system permease protein glnP [Yersinia mollaretii ATCC 43969] gi|238717711|gb|EEQ09547.1| Glutamine transport system permease protein glnP [Yersinia mollaretii ATCC 43969] Length = 218 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 89/141 (63%), Gaps = 1/141 (0%) Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTP++VQ+ I++ LP + + D F A ++++ +N AYI+EI R +++SI G Sbjct: 61 LIRGTPIVVQVMFIYFALPMMMPVRIDPFSAAVVTIIINSGAYIAEITRGAVLSIHNGFR 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A A+GL+++ T+R++I P + PL +++I +K TS+ I + E+ + Q I+ Sbjct: 121 EAGLALGLSKRDTLRYVIAPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEII 180 Query: 183 STTYQPLIIYCELAFVYLILT 203 + ++ + I+ +A +YLI+T Sbjct: 181 AGNFRAMEIWSAVAVIYLIIT 201 >gi|291519629|emb|CBK74850.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Butyrivibrio fibrisolvens 16/4] Length = 223 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 94/174 (54%), Gaps = 9/174 (5%) Query: 37 IIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI--------GIVF 88 IIG ++ + + ++I +V + RG P++V F I++G+P++ I Sbjct: 32 IIGMIFGIMGVL-KNRACNIISQIFVDVIRGVPMIVLAFFIYFGIPYLFNTIIGGFAINL 90 Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 + A L LN AY++EIIR+ I S+ GQ +A+ ++GLT Q +R ++LPQ I T Sbjct: 91 TALQAGTACLALNCGAYMAEIIRAGIQSVDIGQMEAARSLGLTYSQAMRKVVLPQAIRTM 150 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 ++FI LK TS+ S I PE+ TA+ + + T+ + + +YLI+ Sbjct: 151 IPTFINQFIITLKDTSILSVIGFPELVNTAKNVQANTFMSFQTWAIVGIMYLIV 204 >gi|94500102|ref|ZP_01306636.1| ABC-type arginine/histidine transport system, permease component [Oceanobacter sp. RED65] gi|94427675|gb|EAT12651.1| ABC-type arginine/histidine transport system, permease component [Oceanobacter sp. RED65] Length = 237 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/212 (27%), Positives = 119/212 (56%), Gaps = 10/212 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + V+T + +S +I L++ +A++R + +I+ + + ++FRGTPLL+QL++I Sbjct: 23 WDGFVMTTQLVFLSLIIGLLVSVPLAIMRTS-KNPLINYPVWVFTYVFRGTPLLIQLYLI 81 Query: 78 FYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +YG+ I + DS + +I+ LN +AY +EI R +I + KG+ +A+ A Sbjct: 82 YYGVTLIEGIQDSVFWVIFERAYYPCLIAFALNTAAYTTEIFRGAIETTSKGEIEAARAY 141 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G++ + ++ I+LP + ++E I +L ++++AST+TI ++ A+ I + Y P Sbjct: 142 GMSWSKCMKRIVLPSAFRRAIPAYTNEVIFMLHASAIASTVTIIDLTGAARDIYARFYAP 201 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + +A +YL LT ++ ++E + H Sbjct: 202 FEAFLFVAAIYLCLTFSIIMLFKQLEKRLLGH 233 >gi|320533838|ref|ZP_08034423.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320133933|gb|EFW26296.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 321 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 117/219 (53%), Gaps = 30/219 (13%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+ TL + ++ I +++ A++R S+ ++ + Y+W FRGTP+ QL +F+ Sbjct: 66 AVGWTLLLTFMAMAIGIVLAVTTAILRQS-SNPVLRWVALAYLWFFRGTPIYTQL--VFW 122 Query: 80 GLPH-------IGI-------------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 G +GI VF FVA ++ L +N AY+SEI+RS + S+ K Sbjct: 123 GALSALYQKLSLGIPFGPELLTFKTTAVFTPFVAAVLGLGINEGAYLSEIVRSGLNSVDK 182 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS--VASTITIPEIFQT 177 GQ +A+ A+G+++ Q +R I+LPQ + P +E IS+LK+TS +A T+ F T Sbjct: 183 GQSEAAGALGMSKSQILRRIVLPQAMRVIVPPTGNETISMLKTTSLVLAVPFTLDLTFVT 242 Query: 178 AQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 S TYQ PL++ A Y+++TS + Q IE Sbjct: 243 -NSYASLTYQIIPLLLVA--AIWYIVITSILMVGQHYIE 278 >gi|308186030|ref|YP_003930161.1| glutamate/aspartate transport system permease protein gltJ [Pantoea vagans C9-1] gi|308056540|gb|ADO08712.1| Glutamate/aspartate transport system permease protein gltJ [Pantoea vagans C9-1] Length = 246 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 104/180 (57%), Gaps = 14/180 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++C +++I+ +G F ++R + ++S I YV +FR PL+VQ F Sbjct: 25 LWSGFQVTIAVSCCAWIIAFCVGSFFGILRTV-PNRLLSTIGTCYVELFRNIPLIVQFFF 83 Query: 77 IFYGLPHI-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + P + G+ F S F++ +I L L +A + E +R++I S+P GQ + Sbjct: 84 WYLVAPELVGEKLGMWFKSELDPNIQFFLSSMICLGLFTAARVCEQVRAAIQSLPAGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 >gi|282864437|ref|ZP_06273493.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] gi|282560924|gb|EFB66470.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] Length = 288 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 21/216 (9%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL + + + +G +A+ R+ + ++ + Y+W+FR TP+LVQL F Sbjct: 76 GLGLTLWLTALVMALGFALGTLLAMGRLS-RNPVLRSVSWGYIWLFRSTPILVQLLFWF- 133 Query: 80 GLPHIGIVFDSFVAI------------IISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 +IG ++ + + +I LTL+ +AY +E++R I+S+ +GQ +A+ + Sbjct: 134 ---NIGALYPQILGVDTVHLLGPMAVAVIGLTLHEAAYAAEVVRGGILSVERGQLEAAQS 190 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL + +R I+LPQ + P + I LK TS+ S I + ++ + Q + TYQ Sbjct: 191 LGLGPWRRLRRIVLPQAMRAIVPPAGNMLIGTLKGTSIVSIIAVQDLLYSVQLVYHRTYQ 250 Query: 188 --PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 PL++ L Y+ +TS + Q +E + T Sbjct: 251 VIPLLLVATL--WYVAVTSLLSVGQYYVERRYARGT 284 >gi|229101401|ref|ZP_04232145.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-28] gi|228682106|gb|EEL36239.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-28] Length = 218 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 104/176 (59%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ + S I+G +AV+ I I++ + +V R PL++ F+ ++ LP IGI Sbjct: 25 SVIALIGSFILGVILAVMCIA-PIRILNWVGSAFVEFVRNIPLVLIAFIFYFALPVIGIT 83 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ + GLT Q + +I+LPQ + Sbjct: 84 LNGFVAGTLTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYVQGMYYIVLPQAMKI 143 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ I ++ I + T+ +Y + YLILT Sbjct: 144 VIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFVGMFYLILT 199 >gi|78357807|ref|YP_389256.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220212|gb|ABB39561.1| amino acid ABC transporter membrane protein 2, PAAT family / amino acid ABC transporter membrane protein 1, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 596 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/228 (30%), Positives = 119/228 (52%), Gaps = 22/228 (9%) Query: 1 MKYEWFNLIIDSFPQLL---------------YAAIVVTLPIACISFVISLIIGFFIAVI 45 M +EW ++I D+ LL + +L +A I+ +S IG + + Sbjct: 356 MGFEW-SVIADNISALLIWHFPNGSENEIFMGLGGLASSLLMALIAISVSFFIGLAVGLG 414 Query: 46 RIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSA 104 R + I L Y+ I RG PL++ +F I++ LP + G FD F + I+LT+ A Sbjct: 415 RCA-RNRIFRLPCLVYIEIIRGNPLIIVIFWIYFFLPVVFGAYFDVFWSATIALTVFTGA 473 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 Y++EI+R+ + +IP GQ +A+Y+ GL+ QT+R I+LPQ + + +FI+I K TS Sbjct: 474 YLAEIVRAGVQNIPAGQVEAAYSTGLSYFQTMRRIVLPQALKQMIPAIVGQFIAIFKDTS 533 Query: 165 VASTITIPEIFQTAQRIVST-TYQPLIIYCELAFVYLILTSFCYIIQI 211 +A I + E+ AQ + + P I+ +A +Y + CY + + Sbjct: 534 LAFVIGVLELTFVAQGLDNRLMVYPFEIWTTVAVLYFVC---CYAMSV 578 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 103/180 (57%), Gaps = 16/180 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRI-FFSDTIIS--LIMHFYVWIFRGTPLLVQLFV 76 +V T+ I+ IS ++L +G + + R+ F IS +++ F FR TPLLVQLF Sbjct: 60 GLVTTVNISLISSALALGLGTMLGLARLSAFRPLRISASVVVEF----FRNTPLLVQLFF 115 Query: 77 IFYGLPHI------GIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 ++ P++ VF+ F + +L + ++++E+IR+ + SIPKG +A+Y+ Sbjct: 116 WYFAFPNVLPEAARQWVFEQNFEFWCAVSALGVYTGSFMAEVIRAGLQSIPKGLLEAAYS 175 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GL+ Q + IILP T PL SEF++ +K++S+A I + E+ +Q++ S T++ Sbjct: 176 SGLSYFQVLTRIILPLAFRTIIPPLGSEFLNNMKNSSLAMVIGVAELTWHSQQVQSLTFR 235 >gi|295703709|ref|YP_003596784.1| putative amino acid ABC transporter permease [Bacillus megaterium DSM 319] gi|294801368|gb|ADF38434.1| putative amino acid ABC transporter, permease protein [Bacillus megaterium DSM 319] Length = 233 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/197 (34%), Positives = 113/197 (57%), Gaps = 16/197 (8%) Query: 42 IAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP------HIGI-VFDSFVAI 94 IA+IRI ++S + Y+ R TPLLVQLF++++GLP HI I + + Sbjct: 41 IALIRIQ-KKPVLSKMATIYLSFMRCTPLLVQLFLVYFGLPQLLLLVHIDINSWSRITFL 99 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 +I+ +L+ +A +SE+IRS+ SI KGQ++A+Y+IG+ Q++R IILPQ + + + Sbjct: 100 VIAFSLHTAAPLSEVIRSAYFSIDKGQFEAAYSIGMNYFQSLRRIILPQAFVAALPNVGN 159 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI--IYCELAFVYLILTSFCYIIQI- 211 IS+LK T++A +I I +I + I+ Y + IY ++ VY S C +I+I Sbjct: 160 ATISLLKDTALAFSIGIIDIMGQVRLILGNNYGIGMFEIYVTISLVYW---SICIVIEII 216 Query: 212 --KIESSVTQHTYSVDK 226 +E + + S+ K Sbjct: 217 VSYLEKHLKKGRVSISK 233 >gi|293391347|ref|ZP_06635681.1| arginine transport system permease protein [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951881|gb|EFE02000.1| arginine transport system permease protein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 228 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 119/209 (56%), Gaps = 13/209 (6%) Query: 21 IVVTLPIACISFVISLIIGFFIAVIRIF---FSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 I +P + + V+SL I FF+A++ + + ++ Y+ +F GTPLLVQ F+I Sbjct: 10 IAQGIPTSLLLTVVSLAIAFFLALVLTVLLAMGNKAVKSAVNLYLTLFTGTPLLVQFFLI 69 Query: 78 FYG---------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 + G P ++ +++ ++L LN +AY +++ ++ +IPKGQW++ A+ Sbjct: 70 YAGPGQFQWIVNSPLWSVLSNAWFCAALALALNSAAYSTQLFHGAVKAIPKGQWESCEAL 129 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+R QT++ I++P + + S+E I + K T++ASTITI +I A+++ T Y Sbjct: 130 GLSRFQTLK-ILIPYALKRALPSYSNEIILVFKGTALASTITIMDIMGYARQLYGTEYDA 188 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSV 217 L IY +YLI+T ++ ++E+ V Sbjct: 189 LTIYGIAGGIYLIITGIATLLLRRLENKV 217 >gi|172059652|ref|YP_001807304.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171992169|gb|ACB63088.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 246 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/199 (32%), Positives = 108/199 (54%), Gaps = 13/199 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ +++VI+LI+G V+R + +S I YV IFR PL+VQ F+ Sbjct: 26 LMSGFWVTIEVSLVAWVIALIVGSLFGVLRTV-PNKWLSAIGTVYVSIFRNIPLIVQFFI 84 Query: 77 IFYGLPH-----IGIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + +P +G F A I+ L L A + E +RS I ++PKGQ A Sbjct: 85 WYLVVPELLPASVGTWIKQLPPTTQFFTASIVCLGLFTGARVCEQVRSGINALPKGQRAA 144 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 145 GLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDY 204 Query: 185 TYQPLIIYCELAFVYLILT 203 T Q + + Y+++ Sbjct: 205 TAQTYESFIAVTLAYVVIN 223 >gi|283954241|ref|ZP_06371765.1| LOW QUALITY PROTEIN: polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 414] gi|283794259|gb|EFC33004.1| LOW QUALITY PROTEIN: polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 414] Length = 449 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/235 (28%), Positives = 116/235 (49%), Gaps = 31/235 (13%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I+ P L AA + T+ ++ + SLIIG F ++ +F I+ I Y+ Sbjct: 3 FDFILAQAPVFLTAAWL-TIKLSFFGIIFSLIIGLF-CILMGYFKIKILENICKLYIEFS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD------------------SFVAIIISLTLNFSAYIS 107 R TPLL+QLF ++Y LP I + SF I+ L+ +Y++ Sbjct: 61 RNTPLLIQLFFLYYALPKFNIHLEQIPPLNLICLSVEETLRPSFACAIVGLSFLGGSYMA 120 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E +R+ +I K Q++A A+G ++ +R++ILPQ + S +S+ I ++K TSV S Sbjct: 121 ESLRAGFEAIKKQQFEAGLALGFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVS 180 Query: 168 TITIPEIFQTAQRIVSTTYQP-----------LIIYCELAFVYLILTSFCYIIQI 211 I +P++ + + S TY+ L I L+F+ L C+++++ Sbjct: 181 IIALPDLVNLMKSLNSLTYKTDELLFLLFMGYLCIILPLSFILLKFEKGCFMLEL 235 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 109/209 (52%), Gaps = 14/209 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ + +TL I+ IS VI+ I G F+ ++ + F + I + R PLLV LFV Sbjct: 244 LWQGLFITLEISFISIVITSIGGLFLGIL-MSFKNVYIYTFCRLGLEFVRVMPLLVWLFV 302 Query: 77 IFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +++G P G S A II ++ + +++R S+ SIPK Q++++ ++GL Q+ Sbjct: 303 VYFGFPRWFGWDLGSVSAAIIVFSIWGCFEMMDLVRISLQSIPKHQYESASSLGLNTVQS 362 Query: 136 IRHIILPQTITTSAVPLSSEFIS-ILKSTSVASTITIPEIFQTAQRIVS----TTYQPLI 190 ++I+PQ + P+S ++ ++KST+ A I E+ + Q+I+ + P I Sbjct: 363 FVYVIIPQAV-RRLTPMSMNLLTRMIKSTTFAYLIGAVELVKVGQQIIEFHNRNDFAPFI 421 Query: 191 IYCELAFVYLILTSFCYIIQI---KIESS 216 IY ++ I + CY I + K+E Sbjct: 422 IY---GLIFFIFFTLCYPITLYSRKLEKK 447 >gi|241663661|ref|YP_002982021.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12D] gi|240865688|gb|ACS63349.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] Length = 231 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 123/227 (54%), Gaps = 17/227 (7%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ + Q L + +++ ++ ++FV++L + +A++R+ ++ I YV R Sbjct: 9 LLSGQYHQWLVSGFFLSIKLSVLAFVLALPLAITVALLRLA-PVALLRGIGQTYVEAIRN 67 Query: 68 TPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 PLL + ++G P I + +++ A+I +L L +AY++E IRS I SI Sbjct: 68 VPLLAHMLFWYFGAPQILPEFIRDWLYSMNYEAASAVI-ALVLYTAAYMAEDIRSGIRSI 126 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PK Q +AS A+GL+ Q +R ++LPQ++ + PL S+ +++ K++S+A I + E+ Sbjct: 127 PKEQLEASRALGLSFLQAMRLVVLPQSLRVTVPPLVSQTLNLWKNSSIAMVIGVAELMYQ 186 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 AQ++ S T++ + YL ++ I I + S+ QH Y V Sbjct: 187 AQQVESATFRGFEAFAFATAAYLTIS-----IAITVFSAWYQHRYPV 228 >gi|238784074|ref|ZP_04628089.1| Glutamine transport system permease protein glnP [Yersinia bercovieri ATCC 43970] gi|238788814|ref|ZP_04632605.1| Glutamine transport system permease protein glnP [Yersinia frederiksenii ATCC 33641] gi|238715051|gb|EEQ07048.1| Glutamine transport system permease protein glnP [Yersinia bercovieri ATCC 43970] gi|238723119|gb|EEQ14768.1| Glutamine transport system permease protein glnP [Yersinia frederiksenii ATCC 33641] Length = 218 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 89/141 (63%), Gaps = 1/141 (0%) Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTP++VQ+ I++ LP + + D F A ++++ +N AYI+EI R +++SI G Sbjct: 61 LIRGTPIVVQVMFIYFALPMMMPVRIDPFSAAVVTIIINSGAYIAEITRGAVLSIHNGFR 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A A+GL+++ T+R++I P + PL +++I +K TS+ I + E+ + Q I+ Sbjct: 121 EAGLALGLSKRDTLRYVIAPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEII 180 Query: 183 STTYQPLIIYCELAFVYLILT 203 + ++ + I+ +A +YLI+T Sbjct: 181 AGNFRAMEIWSAVAVIYLIIT 201 >gi|153010088|ref|YP_001371302.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151561976|gb|ABS15473.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 548 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 101/186 (54%), Gaps = 13/186 (6%) Query: 28 ACISFVI-SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 A I+FV+ ++ +G A I + S+ F V RG P+LV V++ GLP G Sbjct: 346 AGIAFVVLAIALGLLTACGHIHRRHPL-SIGSEFIVDTIRGIPMLV--IVLYVGLPLSGA 402 Query: 87 VFDSFVAII---------ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 + D+ +I ++ L +SAY++EI RS I +IP+GQ +A+ ++GL QT R Sbjct: 403 LKDATQGVIDPPNMARGVAAMALAYSAYLAEIFRSGINAIPRGQIEAARSLGLNGWQTAR 462 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 +ILPQ PL +E I+ILK TS+ S ++I +I Q + S ++ P Y A Sbjct: 463 LVILPQAFRIIIPPLGNELIAILKDTSLLSILSIRDITQRMREFQSASFLPFAPYNSAAI 522 Query: 198 VYLILT 203 Y++LT Sbjct: 523 FYILLT 528 >gi|229918160|ref|YP_002886806.1| polar amino acid ABC transporter inner membrane subunit [Exiguobacterium sp. AT1b] gi|229469589|gb|ACQ71361.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sp. AT1b] Length = 216 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/164 (37%), Positives = 99/164 (60%), Gaps = 5/164 (3%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 I+ L Y+ FRGTPLL+QL +++ GL + A+I L +F+AYISE R+ Sbjct: 50 IVRLFTRTYISFFRGTPLLLQLLILYVGLTGF-VQLSGMQALIFGLGFHFAAYISEAFRA 108 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I S+ KGQ +AS A+G+ + + + II PQ ++ + P+S+ I I+KSTS+ S I + Sbjct: 109 AINSVDKGQVEASVALGIPKMKRFKDIIFPQALSRAIPPVSNSVIDIIKSTSLGSVIAVQ 168 Query: 173 EIFQTAQRIVSTTY--QPLIIYCELAFVYLILTSFCYIIQIKIE 214 E+ + +I +TTY PL+++ A +Y IL++ Q K+E Sbjct: 169 ELTYVSDQIAATTYLVMPLLLFS--ASIYWILSTLIQAGQHKLE 210 >gi|170679691|ref|YP_001742969.1| arginine transporter permease subunit ArtM [Escherichia coli SMS-3-5] gi|218704288|ref|YP_002411807.1| arginine permease ArtM [Escherichia coli UMN026] gi|293404166|ref|ZP_06648160.1| artM [Escherichia coli FVEC1412] gi|293409236|ref|ZP_06652812.1| artM [Escherichia coli B354] gi|298379949|ref|ZP_06989554.1| arginine transport system permease [Escherichia coli FVEC1302] gi|300901228|ref|ZP_07119329.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|300935048|ref|ZP_07150080.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|331682370|ref|ZP_08382989.1| arginine transport system permease protein ArtM [Escherichia coli H299] gi|170517409|gb|ACB15587.1| arginine ABC transporter, permease protein ArtM [Escherichia coli SMS-3-5] gi|218431385|emb|CAR12263.1| arginine transporter subunit ; membrane component of ABC superfamily [Escherichia coli UMN026] gi|291428752|gb|EFF01777.1| artM [Escherichia coli FVEC1412] gi|291469704|gb|EFF12188.1| artM [Escherichia coli B354] gi|298279647|gb|EFI21155.1| arginine transport system permease [Escherichia coli FVEC1302] gi|300355302|gb|EFJ71172.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|300459711|gb|EFK23204.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|331080001|gb|EGI51180.1| arginine transport system permease protein ArtM [Escherichia coli H299] Length = 222 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/219 (27%), Positives = 121/219 (55%), Gaps = 14/219 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + + P+L+ + +L + S +++LI+ +I + ++ L+ Y+ +F GT Sbjct: 1 MFEYLPELM-KGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLV-RGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW + A+G+++K T+ I+LP S S+E + + KSTS+A TIT+ E+ + Sbjct: 119 EGQWQSCSALGMSKKDTL-AILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMGYS 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 Q + TY ++++ +YLI+ ++ IE Sbjct: 178 QLLYGRTYD-VMVFGAAGIIYLIVNGLLTLMMRLIERKA 215 >gi|332529816|ref|ZP_08405770.1| polar amino acid ABC transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] gi|332040837|gb|EGI77209.1| polar amino acid ABC transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] Length = 223 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/196 (29%), Positives = 104/196 (53%), Gaps = 3/196 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVW 63 F+L++ +P LL + TL + I+ + L++G A R + ++ L + YV Sbjct: 7 FSLLLAQWPFLLRG-VAWTLGLTAIAMALGLVVGVACAWARTTSARGLLWLRAVTGAYVE 65 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + R TP +VQLF IF+GLP +G+ A I+++ LN AY +EIIR+ + + P+GQ + Sbjct: 66 LIRNTPFIVQLFFIFFGLPSVGLRLSPEAASILAMVLNLGAYSAEIIRAGVQATPRGQIE 125 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++ L R Q ++LP + L S+ I ++ ++V I+ E+ A I + Sbjct: 126 AALSLALNRWQVYTRVVLPPALKRVWPALVSQIIIVMLGSAVCGQISTEELSYAANVISA 185 Query: 184 TTYQPLIIYCELAFVY 199 +++ Y + VY Sbjct: 186 ASFRTFESYIVVTAVY 201 >gi|237650052|ref|ZP_04524304.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CCRI 1974] gi|237822719|ref|ZP_04598564.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CCRI 1974M2] Length = 226 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 104/194 (53%), Gaps = 1/194 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A +TL IA + S ++G +++IR + +++ + Y+ + R T Sbjct: 5 IVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIR-HYRIPVLAQVATAYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IGIV S V + L +Y++E RS + +I + Q + AI Sbjct: 64 PLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q +++LPQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 124 GLTPLQVFYYVVLPQATAVALPSFSANVIFLIKETSVFSAVALTDLMYVAKDLIGLYYET 183 Query: 189 LIIYCELAFVYLIL 202 I L YLI+ Sbjct: 184 DIALAMLVVAYLIM 197 >gi|167563476|ref|ZP_02356392.1| histidine transport system permease protein [Burkholderia oklahomensis EO147] gi|167574437|ref|ZP_02367311.1| histidine transport system permease protein [Burkholderia oklahomensis C6786] Length = 237 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 102/186 (54%), Gaps = 17/186 (9%) Query: 33 VISLIIGFF----IAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF 88 V SL IGF +AV R+ + +S + FY ++FRGTPL VQL +I+ G+ + V Sbjct: 31 VASLAIGFLCAVPLAVARVS-KNRWLSTPVRFYTYVFRGTPLYVQLLLIYTGMYSLAFVR 89 Query: 89 D----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 D F I++ LN AY +EI +I +IP G+ +A+ A G++ R Sbjct: 90 DHAFLDAFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYGMSPFTMYRR 149 Query: 139 IILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 +ILP ++ A+PL S+E I +L +T+VA T T+P+I + A+ S TY + A Sbjct: 150 VILPSSLR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYMAFQSFGIAAL 208 Query: 198 VYLILT 203 +YL ++ Sbjct: 209 IYLAVS 214 >gi|77407242|ref|ZP_00784203.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] gi|77174148|gb|EAO77056.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] Length = 214 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/153 (35%), Positives = 90/153 (58%), Gaps = 3/153 (1%) Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIR 111 LI YV +F+ TPLLVQ+ ++YGL I ++ +F ++ + L AYISE+IR Sbjct: 61 KLISRIYVEVFQNTPLLVQMVFVYYGLAIISNGHVMISAFFTAVLCVGLYHGAYISEVIR 120 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S I ++PKGQ +A+ A G T QT++ IILPQ + T P++++ ++++K+TS + I+ Sbjct: 121 SGIEAVPKGQTEAALAQGFTANQTMQLIILPQAVRTILPPMTNQVVNLIKNTSTVAIISG 180 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 +I A+ T + + A +YL+ S Sbjct: 181 ADIMFVAKAWAYDTTNYIPAFAGAAILYLVFXS 213 >gi|303247500|ref|ZP_07333772.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] gi|302491196|gb|EFL51088.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] Length = 230 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/223 (26%), Positives = 115/223 (51%), Gaps = 10/223 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 II + L+ +I++ +P S ++ + IG + R++ ++ ++ +YV +FRGT Sbjct: 12 IIPALNAGLWTSILLIIP----SSLLGVAIGVSVGTARVYGPRPLVR-VLEWYVSLFRGT 66 Query: 69 PLLVQLFVIFYGLPHIGI-----VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 PL+VQL+ ++ LP++ I + A II L AY SE IR ++SI +GQ Sbjct: 67 PLVVQLYFWYFALPYVSIGGWRCILSPMWASIIGFALCSGAYQSEYIRGGLLSIKRGQLR 126 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+G+T TI ++LPQ + +E I ++K +S+AS IT+ ++ + + Sbjct: 127 AAQALGMTPFTTITSVVLPQAFRRALPGCGNEIIYLIKYSSLASIITVSDLTGMGRSLAK 186 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 T++ ++ + YL L + ++ +E + + K Sbjct: 187 ATFRNTEVFVVVGVYYLALVTVATLVLRSVEKRLELPGFEAKK 229 >gi|206576837|ref|YP_002237301.1| histidine ABC transporter, permease protein HisQ [Klebsiella pneumoniae 342] gi|288934235|ref|YP_003438294.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|290508438|ref|ZP_06547809.1| histidine transport system permease [Klebsiella sp. 1_1_55] gi|206565895|gb|ACI07671.1| histidine ABC transporter, permease protein HisQ [Klebsiella pneumoniae 342] gi|288888964|gb|ADC57282.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] gi|289777832|gb|EFD85829.1| histidine transport system permease [Klebsiella sp. 1_1_55] Length = 228 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 112/225 (49%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F Q++ +VTL +A S V++++IG A ++ S+ ++L+ Y + RG P L Sbjct: 4 GFSQVILQGALVTLELALSSVVLAVLIGLAGAGAKLS-SNRPLALVFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G+ D +A II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNSVTDALGMAQFDIDPMIAGIITLGFIYGAYFTETFRGAYLAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G + QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 HIEAATAFGFSGGQTFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T+QP +YL+ T+ + + +E T D Sbjct: 183 AGKSTWQPFYFAIVCGLIYLVFTTLSNGVLLLLERRYTVGVKRAD 227 >gi|313899533|ref|ZP_07833042.1| ABC transporter, permease protein [Clostridium sp. HGF2] gi|312955640|gb|EFR37299.1| ABC transporter, permease protein [Clostridium sp. HGF2] Length = 260 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 82/127 (64%), Gaps = 5/127 (3%) Query: 53 IISLIMH----FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISE 108 II I+H YVWIFRGTP++VQ +I++GL + + + A I +++N AY++E Sbjct: 70 IIKKILHGFVGLYVWIFRGTPMMVQALIIYHGLRPV-LNWSPVTAGITIISINTGAYMAE 128 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 IIR+ I SI KGQ +A+ ++G+T QT+ IILPQ I S + +EFI +K +S+ + Sbjct: 129 IIRAGIQSIDKGQNEAARSLGMTSTQTMMSIILPQAIRNSFPSIGNEFIVNIKDSSMLNV 188 Query: 169 ITIPEIF 175 I + E++ Sbjct: 189 IGVIELY 195 >gi|291460391|ref|ZP_06599781.1| amino acid ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291416958|gb|EFE90677.1| amino acid ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 208 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 97/170 (57%), Gaps = 1/170 (0%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + A +TL IA + + S++IG +V ++ I+ I YV + R TPLLVQLF + Sbjct: 3 FDAARLTLGIAALGILFSVLIGALCSVTE-YYKLPILRRIASAYVELSRNTPLLVQLFFL 61 Query: 78 FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 ++GLP +GI S + ++ L+ AY++E R+ + ++ Q +A+ ++GLT Q++ Sbjct: 62 YFGLPKLGIRMSSALCGVVGLSFLGGAYMTESFRAGLEAVEGVQREAALSLGLTPLQSMG 121 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 ++I PQ + S L + I ++K TSV S I + ++ A+ ++ YQ Sbjct: 122 YVIFPQALALSVPSLVANVIFLIKETSVFSAIALADLMYVAKDLIGLYYQ 171 >gi|225573415|ref|ZP_03782170.1| hypothetical protein RUMHYD_01607 [Blautia hydrogenotrophica DSM 10507] gi|225039225|gb|EEG49471.1| hypothetical protein RUMHYD_01607 [Blautia hydrogenotrophica DSM 10507] Length = 215 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 2/180 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL + + +T+ + ++ + S++ G +A +R + ++S ++ Y+ IFR PLLV Sbjct: 10 LPDLL-SGLKITVLASIVAILTSVVWGCVLASLRCL-NLRVLSAVIRIYIVIFRNVPLLV 67 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 +F +FYGLP +G+ + +IS+TLN A+++EIIR SI ++P+G+ +A+ ++GL R Sbjct: 68 VMFFLFYGLPLVGVDIPAVFCGVISITLNEGAFVAEIIRGSIKNMPRGEVEAAKSLGLGR 127 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 IR I P S L + ++K TS+ S I I ++ + + +T + P I+ Sbjct: 128 LTIIRRITFPLAFRASIPMLLGQSSIVIKDTSLFSMIMIMDLTRAGSQYYATYFSPTAIW 187 >gi|33151970|ref|NP_873323.1| arginine transporter permease subunit ArtQ [Haemophilus ducreyi 35000HP] gi|33148192|gb|AAP95712.1| arginine transport system permease protein [Haemophilus ducreyi 35000HP] Length = 221 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 120/219 (54%), Gaps = 15/219 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH---FYVWIFRG 67 + FP LLY+A +VTL +A V SL++G ++++ + + I ++ + RG Sbjct: 4 EYFP-LLYSATLVTLGLA----VCSLLVGLCLSILFVALEMNKQAFIRQPTTVFLTLSRG 58 Query: 68 TPLLVQLFVIFYGLPHI-----G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 P ++ + +IF+G + G + F +F +++L+L F+AY S+ +R +I ++P G Sbjct: 59 LPEILVVLLIFFGSTELVEKITGEYVEFSAFGCGVLALSLIFAAYASQSLRGAIQAVPNG 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW + A+GL+R T HI++PQ + LS++++ +LK T++ S I + ++ + Sbjct: 119 QWQSGAALGLSRSYTFWHIVMPQVWRHALPGLSNQWLVLLKDTALISLIGVNDLMRQTDL 178 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 I + +QP Y A +YL +T +I K+ T+ Sbjct: 179 INTNEHQPFTWYGFSALIYLAITLISQVIIAKLAQHFTR 217 >gi|119025521|ref|YP_909366.1| permease protein of ABC transporter system [Bifidobacterium adolescentis ATCC 15703] gi|154486959|ref|ZP_02028366.1| hypothetical protein BIFADO_00796 [Bifidobacterium adolescentis L2-32] gi|118765105|dbj|BAF39284.1| permease protein of ABC transporter system [Bifidobacterium adolescentis ATCC 15703] gi|154084822|gb|EDN83867.1| hypothetical protein BIFADO_00796 [Bifidobacterium adolescentis L2-32] Length = 218 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 100/165 (60%), Gaps = 1/165 (0%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I+ ++++++G A I I ++ ++ Y+ + R TPLLVQL+ +++GLP Sbjct: 20 MTLFISVFGIILAIVVGLVCAGIEIA-RIPVLRQVVRVYIELSRNTPLLVQLYFLYFGLP 78 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 +G+V+ + + I+ L +Y++E +R + +IP+ Q +++Y +GL++ QT+ +++P Sbjct: 79 KLGLVWSAELCAIVGLGFLGGSYMAEAMRGGLETIPEVQRESAYVLGLSKWQTLSRVVIP 138 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 Q I+TS + + I ++K +SV S I + ++ A+ ++ Y Sbjct: 139 QAISTSIPGVVANVIFLIKESSVVSAIALADVMYMAKDLIGMYYD 183 >gi|330890819|gb|EGH23480.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] Length = 220 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/204 (25%), Positives = 110/204 (53%), Gaps = 1/204 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 ++L++ + ++ + ++ +IG ++ + + L + YV + RGTP+ V + Sbjct: 16 EVLWSGFLTSIQCSALAIAAGTLIGMLAGLV-LTYGGFFARLPIRLYVDLIRGTPVFVLV 74 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +FY +P +G +F A I LTL +++SEI+R ++ +IP GQ +A AIGL Q Sbjct: 75 LAVFYMVPALGWQISAFQAGAIGLTLFCGSHVSEIVRGALQAIPAGQLEAGKAIGLRFNQ 134 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 ++R+++LPQ + + I+K++++ S I + E+ + Q++++ T+ L Y Sbjct: 135 SLRYVLLPQAMRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLF 194 Query: 195 LAFVYLILTSFCYIIQIKIESSVT 218 F++ ++ I+ +IE V Sbjct: 195 AGFLFFLINYAIEILGRQIEKRVA 218 >gi|298369218|ref|ZP_06980536.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria sp. oral taxon 014 str. F0314] gi|298283221|gb|EFI24708.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria sp. oral taxon 014 str. F0314] Length = 248 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 100/182 (54%), Gaps = 26/182 (14%) Query: 60 FYVWIFRGTPLLVQLFVIFYGL------PHIGIVFDSFVA----------IIISLTL--N 101 YV +FRGTPL VQ+ + Y P GI+ A II SL L N Sbjct: 68 LYVTLFRGTPLFVQIIIWAYVWFPIFVHPVNGILLSGEEANELRKAYGPLIIGSLALIAN 127 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 AYISEI R+ I SI KGQ +A+ ++GL +Q +R+++LPQ + PL+SEFI++LK Sbjct: 128 SGAYISEIFRAGIQSIDKGQMEAARSLGLNYRQAMRYVVLPQALRRMLPPLASEFITLLK 187 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCE----LAFVYLILTSFCYIIQIKIESSV 217 +S+ S I + E+ Q+ +S Y +Y E +A +YL+LT+ + +++E+ Sbjct: 188 DSSLLSVIGVVELL-AVQKAISGRYS---VYEEPLYTVALIYLVLTTCLGWMFLRLENRY 243 Query: 218 TQ 219 Q Sbjct: 244 NQ 245 >gi|82777623|ref|YP_403972.1| arginine transporter permease subunit ArtM [Shigella dysenteriae Sd197] gi|309785092|ref|ZP_07679725.1| arginine transport system permease protein artM [Shigella dysenteriae 1617] gi|81241771|gb|ABB62481.1| arginine 3rd transport system permease protein [Shigella dysenteriae Sd197] gi|308927462|gb|EFP72936.1| arginine transport system permease protein artM [Shigella dysenteriae 1617] Length = 222 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 121/218 (55%), Gaps = 14/218 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + + P+L+ + +L + S +++LI+ +I + ++ L+ Y+ +F GT Sbjct: 1 MFEYLPELM-KGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLV-RGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW + A+G+++K T+ I+LP S S+E + + KSTS+A TIT+ E+ + Sbjct: 119 EGQWQSCSALGMSKKDTL-AILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMGYS 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 Q + TY ++++ +YLI+ ++ IE Sbjct: 178 QLLYGRTYD-VMVFGAAGIIYLIVNGLLTLMMRLIERK 214 >gi|225374914|ref|ZP_03752135.1| hypothetical protein ROSEINA2194_00537 [Roseburia inulinivorans DSM 16841] gi|225213235|gb|EEG95589.1| hypothetical protein ROSEINA2194_00537 [Roseburia inulinivorans DSM 16841] Length = 250 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 12/213 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIM- 58 + W +I + ++ TL + + +GF + +I+ I D +I I+ Sbjct: 9 FGWIIFLIQQYHGYYLQGLLTTLETSLAGTICGCFLGFLVGIIQATDIRAQDNMIKKILL 68 Query: 59 -------HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEII 110 YV IFRGTP++VQ VI+YG + GI F A I + LN AY+SE + Sbjct: 69 GIPWVIAKIYVTIFRGTPMIVQAMVIYYGSSTVFGIDLKPFNAAIFIILLNTGAYMSETV 128 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R I SI GQ + + A+G+ + +IILPQT A + + F++ +K TSV + I Sbjct: 129 RGGINSIDVGQIEGAKALGMGYVPMMIYIILPQTFKIIAPQIGNTFVANIKDTSVLNVIA 188 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + E+F + T ++ Y A +YL LT Sbjct: 189 VTELFYITKVAAGTYFRMFEAYTITALIYLTLT 221 >gi|330960989|gb|EGH61249.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 220 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/204 (25%), Positives = 112/204 (54%), Gaps = 1/204 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 ++L++ + ++ + ++ + +IG A + + + L + YV + RGTP+ V + Sbjct: 16 EVLWSGFLTSIQCSALAILFGTLIGM-CAGLTLTYGGFFARLPVRLYVDLIRGTPVFVLV 74 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +FY +P +G +F A I LTL ++++EI+R ++ +IP+GQ +A AIGL Q Sbjct: 75 LAVFYMVPALGWQISAFQAGAIGLTLFCGSHVAEIVRGALQAIPRGQIEAGKAIGLRFNQ 134 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 T+R+++LPQ + + I+K++++ S I + E+ + Q++++ T+ L Y Sbjct: 135 TLRYVLLPQAMRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLF 194 Query: 195 LAFVYLILTSFCYIIQIKIESSVT 218 F++ ++ ++ +IE V Sbjct: 195 AGFLFFLINYAIKLLGRQIEKRVA 218 >gi|255524919|ref|ZP_05391867.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] gi|255511397|gb|EET87689.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] Length = 232 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 4/194 (2%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGT 68 SF ++L ++ L I + + GF I + F + I +I + Y+WI RGT Sbjct: 21 SFLKVLMPMLLDGLKITLEVSMFGIFFGFLIGCLSGFALQCKNKITKVIANIYLWIIRGT 80 Query: 69 PLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PL+VQ +++ +P I G S A II ++LN A+I+EI+R S+ I GQ +A + Sbjct: 81 PLIVQALYVYFVIPKITGHDIQSNAAGIIVISLNSGAFIAEIVRGSLEGIDLGQKEAGVS 140 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GLT QT+ H+++P + L ++FI +K T++ S I + EI + Q + T+ Sbjct: 141 LGLTPFQTLWHVVIPPAFKSMLPALFNQFIITVKDTAILSVIVVNEITKQIQNYAAVTFD 200 Query: 188 PLIIYCELAFVYLI 201 + Y A YL+ Sbjct: 201 TIQAYSAGAVFYLV 214 >gi|221196254|ref|ZP_03569301.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2M] gi|221202927|ref|ZP_03575946.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2] gi|221176861|gb|EEE09289.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2] gi|221182808|gb|EEE15208.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2M] Length = 500 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/181 (33%), Positives = 100/181 (55%), Gaps = 8/181 (4%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFD 89 +++GF +A+ R + Y+W FR PLLV L V Y LP + ++ D Sbjct: 35 GVLLGFPVALARQSHQPAL-KRAAAAYIWFFRSLPLLV-LLVFIYNLPQVFPATSTVLSD 92 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 F A +I++ L+ +AY +EI R I+S+P+GQ +A A+G+ R I++PQ I + Sbjct: 93 PFTAGLIAMVLSETAYFAEIHRGGILSVPRGQLEAGRALGIRFTGIQRMIVMPQAIRIAL 152 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY-LILTSFCYI 208 L++EFI+I+K TS+ S I++ EI QR+ + + +AF Y LI+T F + Sbjct: 153 PALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETMLAVAFYYVLIVTVFSRL 212 Query: 209 I 209 + Sbjct: 213 L 213 >gi|187929542|ref|YP_001900029.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12J] gi|309781683|ref|ZP_07676416.1| glutamate/aspartate ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|187726432|gb|ACD27597.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12J] gi|308919324|gb|EFP64988.1| glutamate/aspartate ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 231 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 123/227 (54%), Gaps = 17/227 (7%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ + Q L + +++ ++ ++FV++L + +A++R+ ++ I YV R Sbjct: 9 LLSGQYHQWLVSGFFLSIKLSVLAFVLALPLAITVALLRLA-PVALLRSIGQTYVEAIRN 67 Query: 68 TPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 PLL + ++G P I + +++ A+I +L L +AY++E IRS I SI Sbjct: 68 VPLLAHMLFWYFGAPQILPEFIRDWLYSMNYEAASAVI-ALVLYTAAYMAEDIRSGIRSI 126 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PK Q +AS A+GL+ Q +R ++LPQ++ + PL S+ +++ K++S+A I + E+ Sbjct: 127 PKEQLEASRALGLSFLQAMRLVVLPQSLRVTVPPLVSQTLNLWKNSSIAMVIGVAELMYQ 186 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 AQ++ S T++ + YL ++ I I + S+ QH Y V Sbjct: 187 AQQVESATFRGFEAFAFATAAYLTIS-----IAITVFSAWYQHRYPV 228 >gi|325265330|ref|ZP_08132055.1| amino acid ABC transporter, permease protein [Clostridium sp. D5] gi|324029509|gb|EGB90799.1| amino acid ABC transporter, permease protein [Clostridium sp. D5] Length = 218 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/180 (35%), Positives = 99/180 (55%), Gaps = 25/180 (13%) Query: 30 ISFV--ISLIIGFFIAVIRIFFSDTIISL-------------------IMHFYVWIFRGT 68 ISF+ IS + G I I IFFS + SL I Y+ I RGT Sbjct: 3 ISFMAMISQLSGGMIGTIGIFFSTVLFSLPLGLLVAFGRMSRIKVIQWIAKVYISIMRGT 62 Query: 69 PLLVQLFVIFYGLPHI-GIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 PL++QL V+++G +I GI + A++I+ +N++AY +EI R I S+P GQ++A Sbjct: 63 PLMLQLMVVYFGPYYIFGIRITASYRLTAVLIAFAINYAAYFAEIYRGGIESMPVGQYEA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + +G R QT II PQ I +++E I+++K TS+A I E+F TA++I ++ Sbjct: 123 AKLLGYNRVQTFFRIIFPQVIKRILPSVTNEVITLVKDTSLAFAIAYAEMFTTAKQIAAS 182 >gi|66044226|ref|YP_234067.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63254933|gb|AAY36029.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] Length = 280 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/177 (35%), Positives = 106/177 (59%), Gaps = 1/177 (0%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS 97 +GF A+ R+ S + I FY FRGTPLL+Q+ +I+ GLP +GIV + A +I+ Sbjct: 94 LGFVTALARLS-SSAVAFGIASFYASFFRGTPLLIQILLIYLGLPQLGIVPGAITAGVIA 152 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 L+LN+ AY+SEI R+ II + GQ +A+ A+ L Q + LPQ + T P +++FI Sbjct: 153 LSLNYGAYLSEIFRAGIIGVSVGQREAALALALRPTQIFWRVTLPQAMRTIIPPTTNQFI 212 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S+LK +S+ S + + E+ AQ ++Y+ + + A +Y I++ ++Q ++E Sbjct: 213 SMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 269 >gi|330969355|gb|EGH69421.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 283 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/177 (35%), Positives = 106/177 (59%), Gaps = 1/177 (0%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS 97 +GF A+ R+ S + I FY FRGTPLL+Q+ +I+ GLP +GIV + A +I+ Sbjct: 97 LGFVTALARLS-SSAVAFGIASFYASFFRGTPLLIQILLIYLGLPQLGIVPGAITAGVIA 155 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 L+LN+ AY+SEI R+ II + GQ +A+ A+ L Q + LPQ + T P +++FI Sbjct: 156 LSLNYGAYLSEIFRAGIIGVSVGQREAALALALRPTQIFWRVTLPQAMRTIIPPTTNQFI 215 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S+LK +S+ S + + E+ AQ ++Y+ + + A +Y I++ ++Q ++E Sbjct: 216 SMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 272 >gi|262368884|ref|ZP_06062213.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046] gi|262316562|gb|EEY97600.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046] Length = 247 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 107/195 (54%), Gaps = 15/195 (7%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH--- 83 IA +++ I++++G + ++R + T S I YV IFR PLL+QLF+ FY +P+ Sbjct: 35 IAIVAWSIAMVLGSILGIMRTLPNKTARS-IGTGYVTIFRNVPLLIQLFIWFYVVPNFLP 93 Query: 84 ----------IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 + + ++ I L L +A + E +R+ I ++P GQ +A YA+G + Sbjct: 94 GPIKSWWINDLSAGTTALISASIGLGLFTAARVCEQVRTGIEALPTGQVNAGYAMGFSTA 153 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q R++ILPQ+ T PLSSE + +K+TSVAS + + EI + I T + IY Sbjct: 154 QLYRYVILPQSFRTILPPLSSELTNCVKNTSVASLVGVSEIISQMKTISEYTQNTIEIYT 213 Query: 194 ELAFVYLILTSFCYI 208 + +++++ + C I Sbjct: 214 YVTIIFIVI-NVCLI 227 >gi|311103246|ref|YP_003976099.1| glutamine transport ATP-binding protein GlnQ 1 [Achromobacter xylosoxidans A8] gi|310757935|gb|ADP13384.1| glutamine transport ATP-binding protein GlnQ 1 [Achromobacter xylosoxidans A8] Length = 502 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 107/194 (55%), Gaps = 13/194 (6%) Query: 1 MKYEW---FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI 57 M ++W +L+ D+ + A V + ++ ++VI + GF +A+ + + +S + Sbjct: 1 MHFDWDYAVSLLWDTD---FWKACWVVVKLSTATWVIGVAAGFLLALGKQA-KNPFVSRL 56 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRS 112 Y+W FR PLLV L V Y LP + ++ D F A + +L ++ +A+I+EI R Sbjct: 57 AGLYIWFFRSLPLLV-LLVFIYNLPQVFPAAGALLSDPFYAGLTALVVSETAFIAEIHRG 115 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I+ +P+GQ +A A+G+ R I++PQ + + LS+EFI+I K TS+ S I++ Sbjct: 116 GILGVPRGQIEAGRALGIRYAGIQRMIVIPQALRIALPALSNEFITIAKLTSLVSVISLA 175 Query: 173 EIFQTAQRIVSTTY 186 EI QR+ + + Sbjct: 176 EILLVGQRLYTQNF 189 >gi|308067187|ref|YP_003868792.1| amino acid ABC transporter permease [Paenibacillus polymyxa E681] gi|305856466|gb|ADM68254.1| ABC-type amino acid transport system, permease component [Paenibacillus polymyxa E681] Length = 216 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 4/195 (2%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 ++TL +A S V S +G ++R + +IS + F + + R PLL+ +F I L Sbjct: 20 LLTLEVAIYSIVFSFALGILFGILR-YTRLPVISQVAAFIIDLIRNLPLLLIIFFIGMVL 78 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 P IGI A I L++ A I+EI+RS + S+ KGQ +A+ + GL+ QT+ HIIL Sbjct: 79 PSIGISISIKWAAITGLSIFEGAMIAEIVRSGLNSVHKGQVEAARSSGLSYSQTLWHIIL 138 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL--AFVY 199 PQ + P+ S+FIS+ K TS+A I++PE+ Q IV Q +I L AF+Y Sbjct: 139 PQALRRMVPPIVSQFISLFKDTSLAVIISLPELTHNIQ-IVGGQNQSFVIPALLFAAFLY 197 Query: 200 LILTSFCYIIQIKIE 214 + +I ++E Sbjct: 198 FAVNYSMSLIARRLE 212 >gi|227524120|ref|ZP_03954169.1| ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus hilgardii ATCC 8290] gi|227088751|gb|EEI24063.1| ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus hilgardii ATCC 8290] Length = 488 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/174 (30%), Positives = 106/174 (60%), Gaps = 6/174 (3%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + T+ I+ +S ++IG +A++R + L + + +I RGTPL+VQ+ ++ Sbjct: 288 SGVEYTILISLVSTFFGVLIGVVLALMRFSRQRWLRGLAISYTEFI-RGTPLMVQVMFVY 346 Query: 79 YGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +G IG++ + + ++ +I+++LN AY++EIIR I S+ KGQ +A+ ++GLT+ + Sbjct: 347 FG---IGVIINIPALISGMIAVSLNSGAYVAEIIRGGINSVGKGQTEAAESLGLTKGDMM 403 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 R++ILPQ L +EFIS++K +S+ S I + ++ + + TY+ ++ Sbjct: 404 RYVILPQAFKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLNIVRADTYRGVM 457 >gi|259907902|ref|YP_002648258.1| Histidine transport system permease protein [Erwinia pyrifoliae Ep1/96] gi|224963524|emb|CAX55014.1| Histidine transport system permease protein [Erwinia pyrifoliae Ep1/96] gi|283477779|emb|CAY73695.1| Histidine ABC transport system, inner membrane component [Erwinia pyrifoliae DSM 12163] Length = 228 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + ++++ +VTL +A S V ++I+G A R+ + +++I Y + RG P L Sbjct: 4 GYSEVIFKGALVTLELALSSVVFAVILGLIGAGARLS-NRRPLAVISEVYTTLIRGVPDL 62 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL G D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNQVTDFFGFAQFDIDPMVAGIITLGFIYGAYFTETFRGAWMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A G TR QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 QVEAATAFGFTRSQTFRRILFPAMMRFALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T+QP +YLI T+ + +E T D Sbjct: 183 AGKSTWQPFWFAIVAGIIYLIFTTLSNGVLWWLERRYTVGVKRAD 227 >gi|237800638|ref|ZP_04589099.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023497|gb|EGI03554.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 220 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 111/204 (54%), Gaps = 1/204 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 ++L++ + ++ + ++ V +IG ++ + + L + YV + RGTP+ V + Sbjct: 16 EVLWSGFLTSIQCSALAIVAGTLIGMLAGLV-LTYGGFFARLPVRLYVDLIRGTPVFVLV 74 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +FY +P +G +F A I LTL +++SEI+R ++ +IP GQ +A AIGL Q Sbjct: 75 LAVFYMVPALGWHISAFQAGAIGLTLFCGSHVSEIVRGALQAIPPGQIEAGKAIGLRFSQ 134 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 T+R+++LPQ + + I+K++++ S I + E+ + Q++++ T+ L Y Sbjct: 135 TLRYVLLPQAMRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLF 194 Query: 195 LAFVYLILTSFCYIIQIKIESSVT 218 F++ ++ ++ +IE V Sbjct: 195 AGFLFFLINYAIELLGRQIEKRVA 218 >gi|227509453|ref|ZP_03939502.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227512150|ref|ZP_03942199.1| amino acid ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus buchneri ATCC 11577] gi|227084544|gb|EEI19856.1| amino acid ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus buchneri ATCC 11577] gi|227191165|gb|EEI71232.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 488 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/174 (30%), Positives = 106/174 (60%), Gaps = 6/174 (3%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + T+ I+ +S ++IG +A++R + L + + +I RGTPL+VQ+ ++ Sbjct: 288 SGVEYTILISLVSTFFGVLIGVVLALMRFSRQRWLRGLAISYTEFI-RGTPLMVQVMFVY 346 Query: 79 YGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +G IG++ + + ++ +I+++LN AY++EIIR I S+ KGQ +A+ ++GLT+ + Sbjct: 347 FG---IGVIINIPALISGMIAVSLNSGAYVAEIIRGGINSVGKGQTEAAESLGLTKGDMM 403 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 R++ILPQ L +EFIS++K +S+ S I + ++ + + TY+ ++ Sbjct: 404 RYVILPQAFKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLNIVRADTYRGVM 457 >gi|261377587|ref|ZP_05982160.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria cinerea ATCC 14685] gi|269146335|gb|EEZ72753.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria cinerea ATCC 14685] Length = 248 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 101/183 (55%), Gaps = 27/183 (14%) Query: 61 YVWIFRGTPLLVQLFVI------FYGLPHIGIVFDSFVAI------------IISLTLNF 102 YV +FRGTPL VQ+ + F+ P GI+ + AI ++L N Sbjct: 69 YVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILVNGEAAIELRRGYGPLIAGSLALVANS 128 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AYI EI R+ I SI KGQ +A+ ++G+T Q +R++ILPQ + PL+SEFI++LK Sbjct: 129 GAYICEIFRAGIQSIDKGQMEAARSLGMTYPQAMRYVILPQALRRMLPPLASEFITLLKD 188 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCE----LAFVYLILTSFCYIIQIKIESSVT 218 +S+ S I + E+ Q ++ Y +Y E +A +YL++T+F I +++E+ Sbjct: 189 SSLLSVIAVAEL-AYVQNTITGRYS---VYEEPLYTVALIYLLMTTFLGWIFLRLENRYN 244 Query: 219 -QH 220 QH Sbjct: 245 PQH 247 >gi|307729014|ref|YP_003906238.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307583549|gb|ADN56947.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 245 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/184 (35%), Positives = 106/184 (57%), Gaps = 13/184 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + +V T+ + ++F ++L IG V+R + +L YV +FRG PL+VQ F+ Sbjct: 26 LLSGLVNTVELTLLAFALALAIGTVFGVMRTLPNGGARALSAA-YVSMFRGVPLIVQFFI 84 Query: 77 IFYGLPHI--GIVFDSF----------VAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 F+ +P + G D +A ++SL + + I E +R+ I + P GQ+ A Sbjct: 85 WFFVVPELLPGRAGDWLKSLPSHAQFLIASVVSLGVYTGSRICEQVRAGIQARPVGQFHA 144 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++A+GLTR Q RH++LP T T PL+SEF+ I K+++VASTI + E+ A+++V Sbjct: 145 AFALGLTRAQAYRHVLLPVTFRTILGPLTSEFLIISKNSAVASTIGLLELSGEARQLVDY 204 Query: 185 TYQP 188 T QP Sbjct: 205 TAQP 208 >gi|163815177|ref|ZP_02206558.1| hypothetical protein COPEUT_01335 [Coprococcus eutactus ATCC 27759] gi|158449586|gb|EDP26581.1| hypothetical protein COPEUT_01335 [Coprococcus eutactus ATCC 27759] Length = 236 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 51/151 (33%), Positives = 86/151 (56%), Gaps = 1/151 (0%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 ++ I YV FRGTP++VQL + +Y L P +G ++ LN AYISEI+R Sbjct: 64 VLDAICSVYVGFFRGTPMVVQLLLFYYVLLPIVGGHMTGVQVAMLVFGLNSGAYISEIMR 123 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I+S+ GQ + A+GL+ T+ I++PQ + L +EFIS++K TSV S + Sbjct: 124 GGILSVDPGQMEGGRAMGLSFSTTMLKIVIPQAVKNILPTLGNEFISLIKETSVVSFVGA 183 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 +++ I S +Y+ ++ Y +A +Y+++ Sbjct: 184 TDLYVAFNYIGSNSYEFMVPYLVMALIYIVM 214 >gi|302671820|ref|YP_003831780.1| amino acid ABC transporter permease [Butyrivibrio proteoclasticus B316] gi|302396293|gb|ADL35198.1| amino acid ABC transporter permease protein [Butyrivibrio proteoclasticus B316] Length = 219 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 104/175 (59%), Gaps = 1/175 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I ++ L AI++T+ I + + + +IG A + ++F ++ I+ Y+ +FR T Sbjct: 5 VIKTYLPLYNEAILLTIRIGWLGILAAFVIGLLGAAV-LYFRVPVLKKIIAAYIEVFRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLLVQLF I++ LP IGI + + I+ L L AY+ E IRS + S+ + Q +++ ++ Sbjct: 64 PLLVQLFFIYFALPKIGIRISAEICGILGLGLIGGAYMIETIRSGLESVDRIQSESALSL 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 G+T+ Q HI+LPQ + S + I +LK TSV STI++ ++ TA+ ++ Sbjct: 124 GMTKGQVFFHIVLPQAFSISIPGFVANVIFLLKETSVFSTISLMDLMFTAKDLIG 178 >gi|238765552|ref|ZP_04626465.1| Binding-protein-dependent transport system inner membrane component [Yersinia kristensenii ATCC 33638] gi|238696230|gb|EEP89034.1| Binding-protein-dependent transport system inner membrane component [Yersinia kristensenii ATCC 33638] Length = 245 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 108/203 (53%), Gaps = 29/203 (14%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWI 64 L+ + L+ ++TL I+ + V S ++GF +A R D+ + + F Y + Sbjct: 10 LLAPQYLGWLWHGFLLTLWISACTVVASTLLGFLLAAAR----DSELKGLQWFAIGYSTL 65 Query: 65 FRGTPLLVQLFVIFYGL--------------PHIGIVFD--------SFVAIIISLTLNF 102 FR TPLL+QLF ++ PH VF F+A I LT Sbjct: 66 FRNTPLLIQLFFWYFAASQFLPASWIPWLNTPHEITVFGLTLGWPSFEFLAGFIGLTFYS 125 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +A+I+E +RS I + KGQ A++A+GLT Q++RH++LPQ + + PL ++++I+K+ Sbjct: 126 TAFIAEELRSGISGVAKGQKYAAHALGLTGWQSMRHVVLPQALKIAMPPLLGQYMNIIKN 185 Query: 163 TSVASTITIPEIFQTAQRIVSTT 185 +S+A I + E+ ++++ + T Sbjct: 186 SSLAMAIGVAELSYASRQVETET 208 >gi|312173030|emb|CBX81285.1| Histidine ABC transport system, inner membrane component [Erwinia amylovora ATCC BAA-2158] Length = 238 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 109/200 (54%), Gaps = 19/200 (9%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW----IFRGTPLLVQ 73 ++ + VTL + +S + + +++ R+ I F VW +FRGTPL VQ Sbjct: 20 FSGVAVTLWLLVVSVGLGGCMALLLSIARVSPYKAI-----RFPVWLFTYVFRGTPLYVQ 74 Query: 74 LFVIFYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 L V + G+ + +V ++F +++LTLN AY +E+ +I ++P G+ + Sbjct: 75 LLVFYSGMYTLEVVKGTELLNAFFRSGLNCTLLALTLNTCAYTTEVFAGAIRAVPHGEIE 134 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A G + + R II+P + T+ S+E I +L ST++A T T+P++ + A+ I S Sbjct: 135 AARAYGFSTFKLYRCIIMPSALRTALPAYSNEVILMLHSTALAFTATVPDLLKVARDINS 194 Query: 184 TTYQPLIIYCELAFVYLILT 203 TYQP I + A +YLI++ Sbjct: 195 ATYQPFIAFSLAAVLYLIIS 214 >gi|303247502|ref|ZP_07333774.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] gi|302491198|gb|EFL51090.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] Length = 237 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 108/202 (53%), Gaps = 10/202 (4%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-------LPH 83 + + L++G +AV ++ + + Y+W+FRG P+LVQL++ ++G LP Sbjct: 32 AMALGLLLGIPLAVAHVYGGKPMRRFV-SAYIWLFRGIPILVQLYLFYFGIMAYLSQLPA 90 Query: 84 IGIV--FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + + F++ ++ L L +AY S+I R +I S+P GQ A+ A+G++ IR IIL Sbjct: 91 LSFLPLSSGFLSAVLVLGLTSAAYQSQIFRGAIQSLPPGQLKAARALGMSDAVAIRAIIL 150 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ + + S+E+ +LK +++A TI + E+ + + + T+QPL + ++ Sbjct: 151 PQALRLAIPAWSNEYSILLKDSALAFTIGVLEVMSRTRSVAALTHQPLPLSLLAGALFFF 210 Query: 202 LTSFCYIIQIKIESSVTQHTYS 223 LT ++E+ V Y+ Sbjct: 211 LTWAGIKALKRLEAKVRIPGYA 232 >gi|166032311|ref|ZP_02235140.1| hypothetical protein DORFOR_02014 [Dorea formicigenerans ATCC 27755] gi|166028034|gb|EDR46791.1| hypothetical protein DORFOR_02014 [Dorea formicigenerans ATCC 27755] Length = 219 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 102/184 (55%), Gaps = 3/184 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W + II P AA++ T+ + + ++I+G A+I+ + + I+ Y+ Sbjct: 2 NW-DFIIKYLPMYERAALL-TVKLGLAGVICAIIVGLICAIIQ-YEKVPVARQIVAVYIE 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + R TPLLVQLF I+YGLP IGI D I LT +Y++E RS + ++ Q + Sbjct: 59 LSRNTPLLVQLFFIYYGLPKIGIQTDPQTCGIAGLTFLGGSYMAEAFRSGLETVAAIQTE 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 ++ ++G+ R Q +R+++LPQ + S + I +LK TSV S +++ ++ TA+ ++ Sbjct: 119 SALSLGMNRLQVMRYVVLPQAFSISVPAFMANVIFLLKETSVFSAVSLMDLMFTAKDLIG 178 Query: 184 TTYQ 187 Y+ Sbjct: 179 LYYK 182 >gi|295700417|ref|YP_003608310.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC [Burkholderia sp. CCGE1002] gi|295439630|gb|ADG18799.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Burkholderia sp. CCGE1002] Length = 219 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 111/218 (50%), Gaps = 8/218 (3%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWIFRGT 68 + +L+ T+ + + V++L++ F + R+ FF ++ + Y+ FRGT Sbjct: 5 SGYLELILQGARTTVELTLMGAVLALVMAFVAGLGRLSRFF---VVRALATSYIEFFRGT 61 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 + VQLF ++ LP G+ A +++L LN AY +E++R ++ +I Q A A+ Sbjct: 62 SIFVQLFWAYFVLPMAGLTLTPLQAGVLALGLNVGAYGAEVVRGAVAAIGHEQRSACIAL 121 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 L+R Q +RH+ILPQ + + I +LK T+V S I++ ++ AQ + S T Sbjct: 122 NLSRYQRMRHVILPQALPLMLPTFGNNAIELLKGTAVVSLISLGDMTFQAQVVRSQTGNT 181 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 LI + + +Y + K+ES + ++ +D+ Sbjct: 182 LIPFATILALYFGMACLISFGMRKLESRM---SFGLDR 216 >gi|261212506|ref|ZP_05926791.1| arginine ABC transporter permease protein ArtM [Vibrio sp. RC341] gi|260838437|gb|EEX65093.1| arginine ABC transporter permease protein ArtM [Vibrio sp. RC341] Length = 222 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/179 (32%), Positives = 96/179 (53%), Gaps = 18/179 (10%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS---------L 98 +FS +I+L F GTPLLVQ+F+++YG + +S + + +S L Sbjct: 47 WFSRAVITL--------FTGTPLLVQIFLVYYGPGQFEWIRESVLWVWLSQPWFCAMFAL 98 Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158 LN +AY +++ + + +IP GQW A A+G+ + T+R ++LP + + S+E I Sbjct: 99 ALNTAAYSTQLFKGAFNAIPSGQWQACRALGMNKIATLR-VLLPYALRRAVPAYSNEVIL 157 Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + K TS+ASTITI ++ AQRI + TY L ++ YL + +I +IE Sbjct: 158 VFKGTSLASTITIMDLMGYAQRINAQTYDTLTVFGVAGAFYLAVNGILTLIFRQIEKKA 216 >gi|302525505|ref|ZP_07277847.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. AA4] gi|302434400|gb|EFL06216.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. AA4] Length = 294 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 104/186 (55%), Gaps = 11/186 (5%) Query: 2 KYEWFNLIIDSFPQL---LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLI 57 K+EW + Q+ L A++ T+ + V++++ G A R+ SD + + Sbjct: 49 KWEWLQ-----YAQVQSDLANAVLATVKAFALGAVLAIVFGAVFAAGRL--SDHAWVRGV 101 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 F V FR PLL+ +F+ +YGLP +G+ A+++ LTL + ++E+ R+ I+++ Sbjct: 102 CTFVVEFFRAIPLLILMFLFYYGLPTLGVDTSPLFAVVLGLTLYNGSVLAEVFRAGILAL 161 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKGQ +A+YA+G+ + Q + ++LPQ + + S+ + +LK T++ +T PE+ Sbjct: 162 PKGQSEAAYALGMRKTQVMFTVLLPQALRAMLPTIISQLVVLLKDTALGFLVTYPELLYY 221 Query: 178 AQRIVS 183 A+ I S Sbjct: 222 ARYIGS 227 >gi|254518097|ref|ZP_05130153.1| polar amino acid ABC transporter [Clostridium sp. 7_2_43FAA] gi|226911846|gb|EEH97047.1| polar amino acid ABC transporter [Clostridium sp. 7_2_43FAA] Length = 221 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 105/182 (57%), Gaps = 2/182 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN II S P + A +T+ +A IS ++S++IG I V R +F+ +++I Y+ Sbjct: 5 FNFIIRSLPDF-FQATAITIKLAIISIILSILIGVIIEVAR-YFNIKWVNVISKGYIEFS 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL+Q+F ++YGL +G+ F +I L+ AY++E R I ++ K Q ++ Sbjct: 63 RNTPLLIQVFFLYYGLTKLGVKLSGFACGVIGLSFLGGAYMAESFRGGIDAVAKSQIESG 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL++ Q +R+I++P + + S + + I ++K TS+ +I + E+ + ++ Sbjct: 123 QALGLSKTQILRYIVMPMSFSISIPSIVANCIFLVKETSIIGSIAVAELMFVTKDVIGMY 182 Query: 186 YQ 187 Y+ Sbjct: 183 YK 184 >gi|297199926|ref|ZP_06917323.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sviceus ATCC 29083] gi|197710394|gb|EDY54428.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sviceus ATCC 29083] Length = 216 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 9/190 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI---ISLI 57 M+++W + + D PQ + ++VTL + +IS ++G A++ S + + ++ Sbjct: 1 MEWDW-SAVGDFMPQF-WDGLLVTLQALALGSLISFVLGLVWALLMRAPSRFVRWPVGVV 58 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 F R TPLLVQLF +FY LP G+ + +I + L++S Y ++ R+ I ++ Sbjct: 59 TEF----VRNTPLLVQLFFLFYVLPEWGVTLSALATGVIGIGLHYSTYTMQVYRAGIEAV 114 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQW+A+ A+ L R +T + +ILPQ I L + IS+LK + IT+ E+ Sbjct: 115 PAGQWEAATALNLPRVRTWQVVILPQAIRRVVPALGNYVISMLKDIPMLMVITVLEMLGQ 174 Query: 178 AQRIVSTTYQ 187 A+ +Q Sbjct: 175 ARLFAQEHFQ 184 >gi|83720841|ref|YP_441773.1| hypothetical protein BTH_I1226 [Burkholderia thailandensis E264] gi|167580591|ref|ZP_02373465.1| hypothetical protein BthaT_20718 [Burkholderia thailandensis TXDOH] gi|167618698|ref|ZP_02387329.1| hypothetical protein BthaB_20482 [Burkholderia thailandensis Bt4] gi|257137941|ref|ZP_05586203.1| hypothetical protein BthaA_01784 [Burkholderia thailandensis E264] gi|83654666|gb|ABC38729.1| hypothetical protein BTH_I1226 [Burkholderia thailandensis E264] Length = 246 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 108/201 (53%), Gaps = 17/201 (8%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ ++VI+L++G V+R + +S I YV IFR PL+VQ FV Sbjct: 26 LMSGFWVTVKVSLAAWVIALVVGSLFGVLRTV-PNKWLSAIGTVYVSIFRNIPLIVQFFV 84 Query: 77 IFYGLPHI--------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + +P + G F F A I+ L L A + E +RS I ++PKGQ Sbjct: 85 WYLVVPELLPVSIGTWIKQLPPGTQF--FTASIVCLGLFTGARVCEQVRSGINALPKGQR 142 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 143 AAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLV 202 Query: 183 STTYQPLIIYCELAFVYLILT 203 T Q + + Y+++ Sbjct: 203 DYTAQTYESFIAVTLAYVVIN 223 >gi|38347925|ref|NP_941174.1| glutamine ABC transporter permease protein [Serratia marcescens] gi|152973763|ref|YP_001338802.1| glutamine ABC transporter permease protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|38259402|emb|CAE51629.1| membrane transport system permease protein [Serratia marcescens] gi|150958545|gb|ABR80572.1| hypothetical protein KPN_pKPN5p08192 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 218 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 100/178 (56%), Gaps = 2/178 (1%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-G 85 I+ + IIG + R I + +V + RGTP++VQ+ I++ LP I Sbjct: 25 ISMVGLAGGFIIGLLAGICRAL-GGGIAKTLSLIFVELIRGTPIMVQVMFIYFALPMILP 83 Query: 86 IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTI 145 + D A ++++ +N AYI+EI R +I+SI +G +AS A+GL+++ T+ H+I+P + Sbjct: 84 VRIDPITAAMVTIIINSGAYIAEITRGAILSINRGFKEASLAMGLSQRATLWHVIMPLAL 143 Query: 146 TTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +++I +K TS+ I + E+ + Q I++ ++ L ++ +A +YL +T Sbjct: 144 RRMIPALGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEVWTAVALIYLAVT 201 >gi|283786454|ref|YP_003366319.1| membrane component of ABC transporter [Citrobacter rodentium ICC168] gi|282949908|emb|CBG89533.1| putative membrane component of ABC transporter [Citrobacter rodentium ICC168] Length = 254 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/178 (34%), Positives = 96/178 (53%), Gaps = 31/178 (17%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGL------PHIGIV-----------------FD 89 ++ + FYV FRGTPL VQ+ V+ + L P GI+ + Sbjct: 61 LVQFPVRFYVSAFRGTPLFVQIMVVHFALVPLFINPRDGILVTSGIMSADLARELRSGYG 120 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 +F++ I+++TLN AY+SEI R+ I SI GQ +AS A+G+ +T+R +ILPQ Sbjct: 121 AFLSCIVAITLNAGAYVSEIFRAGIQSIDPGQMEASRALGMPWWKTMRKVILPQAFRRIL 180 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY----QPLIIYCELAFVYLILT 203 PL + I+I+K +S+AS I + ++ A R VS Y +P Y ++ VY +LT Sbjct: 181 PPLGNNAIAIVKDSSLASAIGLADL-AYAARTVSGAYATYWEP---YLTISLVYWVLT 234 >gi|271500408|ref|YP_003333433.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270343963|gb|ACZ76728.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 224 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 86/143 (60%), Gaps = 1/143 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V +FR TP+L+QL +Y LP + G+ +F A +++LTL +AY +EI R+ + S+ + Sbjct: 60 FVELFRNTPVLIQLIWFYYALPVLTGLQLSTFGAAVLALTLYTAAYSTEIFRAGLQSMEQ 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 QW+ + A+G++ +R +ILPQ + L++ I + K TS+AS + + E+ + Sbjct: 120 SQWEGAKALGMSYPLALRRVILPQVLQRMLPALTNRLIELAKVTSLASMLAVNELMYQGR 179 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 + S TY+PL I +A Y +L Sbjct: 180 LLSSDTYRPLEILTVVALFYFVL 202 >gi|161525882|ref|YP_001580894.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189349396|ref|YP_001945024.1| polar amino acid transporter permease [Burkholderia multivorans ATCC 17616] gi|221202316|ref|ZP_03575350.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia multivorans CGD2M] gi|221209130|ref|ZP_03582124.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia multivorans CGD2] gi|221214521|ref|ZP_03587492.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia multivorans CGD1] gi|160343311|gb|ABX16397.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189333418|dbj|BAG42488.1| polar amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] gi|221165778|gb|EED98253.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia multivorans CGD1] gi|221171034|gb|EEE03487.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia multivorans CGD2] gi|221177890|gb|EEE10303.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia multivorans CGD2M] Length = 246 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/185 (34%), Positives = 103/185 (55%), Gaps = 17/185 (9%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ +++VI+LI+G V+R + ++ I YV IFR PL+VQ F+ Sbjct: 26 LMSGFWVTIEVSLVAWVIALIVGSLFGVLRTV-PNKWLAAIGTVYVSIFRNIPLIVQFFI 84 Query: 77 IFYGLPHI--------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + +P + G F F A I+ L L A + E +RS I ++PKGQ Sbjct: 85 WYLVVPELLPASIGTWIKQLPPGTQF--FTASIVCLGLFTGARVCEQVRSGINALPKGQR 142 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 143 AAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLV 202 Query: 183 STTYQ 187 T Q Sbjct: 203 DYTAQ 207 >gi|257461204|ref|ZP_05626302.1| ABC transporter membrane-spanning permease - glutamine transport [Campylobacter gracilis RM3268] gi|257441578|gb|EEV16723.1| ABC transporter membrane-spanning permease - glutamine transport [Campylobacter gracilis RM3268] Length = 217 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 100/178 (56%), Gaps = 1/178 (0%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I F + A V+TL +A ++S+IIGF +I+ + ++S ++ Y+ + R TP Sbjct: 6 IAKFSPMFVKAGVLTLKLAFYGILLSIIIGFICTLIK-YKRLPLLSPLVSAYIELSRNTP 64 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LL+QLF ++YGLP +G+ F I+ L +Y+SE R +I K Q +++ ++G Sbjct: 65 LLIQLFFLYYGLPKLGVQISGFTCAIVGLAFLGGSYMSESFRLGFEAIKKSQIESAMSLG 124 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 L+ Q + +++LP+ + +S+ I +LK TS+ S + + ++ A+ ++ Y+ Sbjct: 125 LSEAQIVFYVVLPRAFAIALPSISANIIFLLKETSIVSIVALADLVYAAKDVIGLYYK 182 >gi|283852209|ref|ZP_06369482.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] gi|283572435|gb|EFC20422.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] Length = 237 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 107/202 (52%), Gaps = 10/202 (4%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-------PH 83 + + L++G +A+ ++ + + YVW+FRG P+LVQL++ ++G+ P Sbjct: 32 AMALGLVLGIPLAISHVY-GGRLARRAVAGYVWLFRGVPILVQLYLFYFGIMAYLSEIPA 90 Query: 84 IGIV--FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + + F + ++ L L +AY S+I R +I +P GQ A+ A+G++ IR IIL Sbjct: 91 LSFLPLSSGFFSAVVVLGLTSAAYQSQIFRGAIRGLPPGQLRAARALGMSDATAIRAIIL 150 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ + S S+E+ +LK +++A TI + E+ + + +TT+QPL + ++ Sbjct: 151 PQALRLSIPAWSNEYSILLKDSALAFTIGVLEVMARTRSVAATTHQPLPLSILAGALFFF 210 Query: 202 LTSFCYIIQIKIESSVTQHTYS 223 LT ++E+ V Y+ Sbjct: 211 LTWAGIKALKRLEAKVRIPGYA 232 >gi|161502502|ref|YP_001569614.1| hypothetical protein SARI_00546 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863849|gb|ABX20472.1| hypothetical protein SARI_00546 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 228 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 111/225 (49%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V++++IG A ++ + + LI Y + RG P L Sbjct: 4 GFSGVILQGAIVTLELALSSVVLAVLIGLVGAGAKLS-QNRVTGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP-HIGIVFDSF----------VAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL + +V DS VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNVVTDSLGIEQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G TR QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTRWQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T++P +YL+ T+ + + +E + D Sbjct: 183 AGKSTWEPFYFAVVCGLIYLVFTTVSNGVLLLLERRYSVGVKRAD 227 >gi|148642866|ref|YP_001273379.1| polar amino acid ABC transporter, permease component [Methanobrevibacter smithii ATCC 35061] gi|222445099|ref|ZP_03607614.1| hypothetical protein METSMIALI_00718 [Methanobrevibacter smithii DSM 2375] gi|261350333|ref|ZP_05975750.1| ABC transporter, permease protein, polar amino acid uptake family [Methanobrevibacter smithii DSM 2374] gi|148551883|gb|ABQ87011.1| polar amino acid ABC transporter, permease component [Methanobrevibacter smithii ATCC 35061] gi|222434664|gb|EEE41829.1| hypothetical protein METSMIALI_00718 [Methanobrevibacter smithii DSM 2375] gi|288861117|gb|EFC93415.1| ABC transporter, permease protein, polar amino acid uptake family [Methanobrevibacter smithii DSM 2374] Length = 216 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 86/135 (63%), Gaps = 10/135 (7%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS-------FVAIIISLTLNFSAYISEI 109 +M Y+ I RGTPL++QL V+F+ P+ VF + +++II+ ++N+SAY +EI Sbjct: 49 LMKVYISIMRGTPLMLQLIVVFFA-PYY--VFGASLSPDYRMISVIIAFSINYSAYFAEI 105 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R I +IPKGQ++A+ +G + +T IILPQ I +++E I+++K TS++ I Sbjct: 106 YRGGIEAIPKGQYEAAQVLGYNKLETFFIIILPQVIKIVLPSITNEVITLVKDTSLSFVI 165 Query: 170 TIPEIFQTAQRIVST 184 IPE+F A++I + Sbjct: 166 AIPEMFTVAKQIAAA 180 >gi|90961050|ref|YP_534966.1| glutamine-binding protein / glutamine transport system permease protein [Lactobacillus salivarius UCC118] gi|90820244|gb|ABD98883.1| Glutamine-binding protein / Glutamine transport system permease protein [Lactobacillus salivarius UCC118] Length = 485 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/188 (33%), Positives = 105/188 (55%), Gaps = 10/188 (5%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSF 91 + ++IGF + VI F+ I + + ++IFRG PLLV I+ G+P + G +F Sbjct: 303 IFGIVIGF-LGVIPNKFAQGISTTV----IYIFRGLPLLVLALFIYNGIPSLTGTKIPAF 357 Query: 92 VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP 151 +A II+LTLN AY + ++ I ++ KGQ +A+ ++GL+ + ++ IILPQ I Sbjct: 358 IAGIITLTLNEGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKAMKKIILPQGIKIMVPS 417 Query: 152 LSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI----LTSFCY 207 ++FI LK TS+ S I I E+ QT + I++ + ++ + +YLI LT Sbjct: 418 FVNQFIITLKDTSILSIIGILELTQTGKIIIARNLEGFKVWAIIGLMYLIVITVLTWISN 477 Query: 208 IIQIKIES 215 +Q K+ S Sbjct: 478 YLQKKMNS 485 >gi|124265325|ref|YP_001019329.1| amino acid ABC transporter [Methylibium petroleiphilum PM1] gi|124258100|gb|ABM93094.1| amino acid ABC transporter [Methylibium petroleiphilum PM1] Length = 250 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 96/173 (55%), Gaps = 18/173 (10%) Query: 61 YVWIFRGTPLLVQLFVIFYGL------PHIGIV------------FDSFVAIIISLTLNF 102 YV FRGTPL VQ+ ++ + L P G++ + +F + ++LTLN Sbjct: 71 YVTFFRGTPLFVQILLVHFALMPALIHPDNGLLLTGEAAREFRQNYGAFFSGALALTLNA 130 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AYISEI R+ I SI GQ A+Y++GLT Q++RH+ILPQ + PL +E ++++K Sbjct: 131 GAYISEIFRAGIQSIHGGQTQAAYSLGLTHVQSMRHVILPQAVRRMVPPLVNEAVTLIKD 190 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +S+ S I + E+ A+ + + Y ++ VYL+LT + ++ES Sbjct: 191 SSLVSAIGLAELALAARTVAGAYSRYWEPYLAISAVYLLLTWLLSTLAKRLES 243 >gi|319404433|emb|CBI78036.1| glutamate/aspartate transport system permease protein GltJ [Bartonella rochalimae ATCC BAA-1498] Length = 250 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 109/194 (56%), Gaps = 7/194 (3%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMH----FYVWIFRGTPLLVQLFVIFYGLPHI-- 84 S V+++ +G I +IR +II+ + F+V I R PLLVQ+F+ ++ +P I Sbjct: 47 SLVLAVFMGVIIGMIRTLPKTSIINNFLRAVGTFWVEIMRNIPLLVQVFLWYFVVPKIYP 106 Query: 85 -GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + F + II +L SA I+E +RS I SIP GQ A+ A+G Q+ R+IILP+ Sbjct: 107 PAMNFPPILLIICALGFFTSARIAEQVRSGIESIPSGQRYAAMAMGFNTYQSYRYIILPR 166 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I T PL+SE + I+K++S+A ++I E+ Q + + Y + +Y++++ Sbjct: 167 AIRTIMPPLTSEAMGIVKNSSIAFAVSINELMQFQYQTIEEVSHVYENYLLVTLLYIVIS 226 Query: 204 SFCYIIQIKIESSV 217 F +I+ IE ++ Sbjct: 227 LFIFILMTIIERAI 240 >gi|296272603|ref|YP_003655234.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter nitrofigilis DSM 7299] gi|296096777|gb|ADG92727.1| polar amino acid ABC transporter, inner membrane subunit [Arcobacter nitrofigilis DSM 7299] Length = 226 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 81/143 (56%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +V + R TP +VQLF IF+GLP IG + A II++ +N AY +EIIR+ + + KG Sbjct: 60 FVEVIRNTPFIVQLFFIFFGLPAIGFKLTAMEAGIIAMVVNLGAYSTEIIRAGVEATGKG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A +GL Q HIILPQ + L S+ + ++ +SV S I++ E+ +A Sbjct: 120 QWEAGKTMGLKWSQIFIHIILPQAFHKISPALVSQCVIVMLGSSVLSQISVEELTFSANF 179 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I S T+ Y + +YL+ Sbjct: 180 IQSRTFLSFESYFIVTAIYLVFA 202 >gi|222102300|ref|YP_002546890.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Agrobacterium radiobacter K84] gi|221728417|gb|ACM31426.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Agrobacterium radiobacter K84] Length = 222 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 111/200 (55%), Gaps = 11/200 (5%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFF-IAVIRIFFSDTIISLIMHFYVW 63 W L++D Q +++ L + + V+ L++GF +A IR+ + +V Sbjct: 7 WVPLLLDGLAQ----TLLLFLIVLALGSVLGLLVGFARLARIRLVRYAALT------FVE 56 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRG L V LF +++ P +G+ + A +I +L +AY SE +R++++S+P Q + Sbjct: 57 FFRGVSLYVTLFWLYFAAPFLGMQLSVWEAAVIGCSLTHAAYSSEYVRAAVLSVPVSQTE 116 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+ ++ Q +R+++LPQ + + +EF+ +LK TS+ S I + E+ + A I+ Sbjct: 117 AAVALSMSAFQRVRYVVLPQALVALLPLMGNEFVMLLKGTSIVSLIGLAELTEQAHSIIV 176 Query: 184 TTYQPLIIYCELAFVYLILT 203 +TYQP+ + + +Y IL Sbjct: 177 STYQPVPVLLTVLGIYFILA 196 >gi|312961373|ref|ZP_07775878.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] gi|311285031|gb|EFQ63607.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] Length = 220 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 89/157 (56%), Gaps = 1/157 (0%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 S I +IG +A + + + YV + R TP+LV + +I++ LP +GI D Sbjct: 31 SIAIGCVIGLLMA-FAMLSRHRALRVFASVYVTVVRNTPILVLILLIYFALPSLGIRLDK 89 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 + II+L+L AY++E+ R+ +++IPKG +A AIGL + +I +P + Sbjct: 90 IPSFIITLSLYAGAYLTEVFRAGLLNIPKGLREAGLAIGLGEWRIRAYITVPVMLRNVLP 149 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 LS+ FIS+ K TS+A+ I +PE+ A++I +Y+ Sbjct: 150 ALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYR 186 >gi|209552183|ref|YP_002284099.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539776|gb|ACI59707.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 216 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 85/141 (60%) Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V IFRG P LV L+++++GLP +V D+ + ++L ++ +++++ ++ I++IP GQ Sbjct: 55 VEIFRGIPALVMLYIVYFGLPQFEVVMDAIPSASVALGISMGGFLADVFKAGILAIPLGQ 114 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ A+GL+R +ILPQTI P+ IS ++T++A TI +PE+ + + Sbjct: 115 REAAAALGLSRSTAFTRVILPQTIRIVTPPVLGYVISYFQATALAYTIAVPELMSRSYTV 174 Query: 182 VSTTYQPLIIYCELAFVYLIL 202 + ++ L + F+Y ++ Sbjct: 175 AADNFRFLEVLTMAGFLYAVI 195 >gi|157151057|ref|YP_001450274.1| amino acid permease protein SP0711 [Streptococcus gordonii str. Challis substr. CH1] gi|157075851|gb|ABV10534.1| amino acid ABC transporter, permease protein SP0711 [Streptococcus gordonii str. Challis substr. CH1] Length = 226 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 98/179 (54%), Gaps = 1/179 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 II+ + L A +TL IA + S ++G +++IR + I+ I Y+ + R T Sbjct: 5 IIEQYYPLYQQAFFLTLHIAVWGIIGSFLLGLVVSIIR-HYRVPILRQIATVYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IG+V S I L +Y++E RS + ++ + Q + +I Sbjct: 64 PLLIQLFFLYFGLPRIGLVLSSEACATIGLIFLGGSYMAESFRSGLEAVSQTQHEIGLSI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GLT +Q R+++LPQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 124 GLTPRQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSVVALADLMYVAKDLIGLYYE 182 >gi|320178444|gb|EFW53412.1| Glutamate Aspartate transport system permease protein GltJ [Shigella boydii ATCC 9905] gi|332094326|gb|EGI99377.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella boydii 5216-82] Length = 246 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 119/214 (55%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ ++G F ++R + +S + YV +FR PL+VQ F Sbjct: 25 IWSGFQVTIALSICAWIIAFLVGSFFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IGI F + F++ ++ L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVIPELLPEKIGIWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ +F ++ +E V Sbjct: 204 YSAHAWESFTAITLAYVLINAFIMLVMTLVERKV 237 >gi|227431442|ref|ZP_03913491.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352808|gb|EEJ42985.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 213 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 110/196 (56%), Gaps = 3/196 (1%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ ++FP L TL + I+ +IS+I+G F A+++I I + YV +FR Sbjct: 3 LLQNNFPTFL-QGFGYTLLSSIIALIISMILGTFFAILQIL-PQNWAQKIGNVYVQVFRN 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PLL+ F F + + I + F A I+L+L SA+I+E +R+ I+S+ GQ + + A Sbjct: 61 IPLLIITFFFFLVVAKV-IPMNGFAAGTIALSLYTSAFIAETVRAGILSVDNGQMEGARA 119 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GL+ Q++R+I+LPQ + L ++FI+++K++S+ + + ++ + + T+ Sbjct: 120 NGLSFNQSMRYIVLPQAFKIALPSLGNQFINLVKNSSILAFVGGLDLMYQGNMVAAATFD 179 Query: 188 PLIIYCELAFVYLILT 203 Y +A YL++T Sbjct: 180 TFSTYIIVALFYLVIT 195 >gi|215485687|ref|YP_002328118.1| glutamate/aspartate transport system permease GltJ; membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|312965094|ref|ZP_07779331.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli 2362-75] gi|215263759|emb|CAS08095.1| glutamate/aspartate transport system permease GltJ; membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|312290185|gb|EFR18068.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli 2362-75] Length = 246 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 119/214 (55%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ ++G F ++R + +S + YV +FR PL+VQ F Sbjct: 25 IWSGFQVTIALSICAWIIAFLVGSFFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F + F++ I+ L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVIPELLPEKIGMWFKAELDPNIQFFLSSILCLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ +F ++ +E V Sbjct: 204 YSAHAWESFTAITLAYVLINAFIMLVMTLVERKV 237 >gi|261404398|ref|YP_003240639.1| polar amino acid ABC transporter inner membrane subunit [Paenibacillus sp. Y412MC10] gi|329929701|ref|ZP_08283387.1| putative glutamine ABC transporter, permease protein GlnM [Paenibacillus sp. HGF5] gi|261280861|gb|ACX62832.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. Y412MC10] gi|328935918|gb|EGG32377.1| putative glutamine ABC transporter, permease protein GlnM [Paenibacillus sp. HGF5] Length = 219 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 116/198 (58%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN++++ + Q + A + T+ + + + SL++G FIA++RI ++ I YV Sbjct: 6 FNILVEHWDQFM-AGLGQTILASLLGLIGSLVLGTFIAIMRIA-PFRVLKAIGTIYVEFI 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R PLLV +F F GLP +GI D F + + L + +A+I+E IR+ I ++P GQ +A+ Sbjct: 64 RNIPLLVVVFFFFLGLPALGIPVDPFTSGTLGLMVYTAAFIAEAIRAGIQAVPSGQSEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 + GL+ Q +R+IILPQ + + ++ I+++K++SV I ++ A I +T Sbjct: 124 RSSGLSYIQNMRYIILPQAVKIVLPAIGNQLINLVKNSSVLGVIAGLDLMYYADLINLST 183 Query: 186 YQPLIIYCELAFVYLILT 203 ++ + +Y +A YL+LT Sbjct: 184 FKGIPVYTFVALFYLLLT 201 >gi|323525257|ref|YP_004227410.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323382259|gb|ADX54350.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 245 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/155 (37%), Positives = 91/155 (58%), Gaps = 12/155 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSF-------VAIIISLTLNFSAYISE 108 YV IFRG PL+VQ F+ F+ +P + G F S +A ++SL + + I E Sbjct: 69 YVSIFRGVPLIVQFFIWFFAVPELLPTAAGDWFKSLPSHPQFLLASVVSLGVYTGSRICE 128 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 +R+ I + P GQ+ A++A+GLTR Q R+++LP T T PL+SEF+ I K+++VAST Sbjct: 129 QVRAGISARPVGQFHAAFALGLTRTQAYRYVLLPVTFRTILGPLTSEFLIISKNSAVAST 188 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I + E+ A+++V T QP + + Y+ L Sbjct: 189 IGLLELSGQARQLVDYTAQPYESFICVTLAYMGLN 223 >gi|269954910|ref|YP_003324699.1| polar amino acid ABC transporter inner membrane subunit [Xylanimonas cellulosilytica DSM 15894] gi|269303591|gb|ACZ29141.1| polar amino acid ABC transporter, inner membrane subunit [Xylanimonas cellulosilytica DSM 15894] Length = 318 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 28/208 (13%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-----PHIG 85 S +++ + +AV+R + ++ + FY+W FRGTP+ VQL F+GL P +G Sbjct: 71 SMALAVTMAILLAVMR-RSDNPVMRGVSWFYIWFFRGTPVFVQL--TFWGLLSVLYPTLG 127 Query: 86 ---------IVFDS------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + F++ F A ++ L N +AY++EI+R+ + S+ GQ +A+ A+G+ Sbjct: 128 LGIPFGPEFVTFETKAVVTVFWAALLGLAFNEAAYLAEIVRAGLTSVDPGQAEAAKALGM 187 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP---EIFQTAQRIVSTTYQ 187 +R I+LPQ + P +E IS+LK+TS+ I +P ++F I + YQ Sbjct: 188 KDTTILRRIVLPQAMRVIVPPTGNETISMLKTTSL--VIAVPFTLDLFYATSAIGNRLYQ 245 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIES 215 P+ + + YL++TS + Q +E Sbjct: 246 PIPLLVVASIWYLVITSILMVGQSYLEK 273 >gi|167904261|ref|ZP_02491466.1| hypothetical protein BpseN_18566 [Burkholderia pseudomallei NCTC 13177] Length = 246 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 108/201 (53%), Gaps = 17/201 (8%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ ++VI+L++G V+R + +S I YV IFR PL+VQ FV Sbjct: 26 LMSGFWVTVKVSLAAWVIALVVGSLFGVLRTV-PNKWLSAIGTVYVSIFRNIPLIVQFFV 84 Query: 77 IFYGLPHI--------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + +P + G F F A I+ L L A + E +RS I ++PKGQ Sbjct: 85 WYLVVPELLPVSIGTWIKQLPPGTQF--FTASIVCLGLFTGARVCEQVRSGINALPKGQR 142 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 143 AAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLV 202 Query: 183 STTYQPLIIYCELAFVYLILT 203 T Q + + Y+++ Sbjct: 203 DYTAQTYESFIAVTLAYVVIN 223 >gi|153215601|ref|ZP_01950046.1| arginine ABC transporter, permease protein [Vibrio cholerae 1587] gi|124114689|gb|EAY33509.1| arginine ABC transporter, permease protein [Vibrio cholerae 1587] Length = 222 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 97/179 (54%), Gaps = 18/179 (10%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI---------IISL 98 +FS +I+L F GTPLLVQ+F+++YG + +S + + +++L Sbjct: 47 WFSRAVITL--------FTGTPLLVQIFLVYYGPGQFEWIRESVLWVWLSQPWFCAMLAL 98 Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158 LN +AY +++ + + +IP GQW A A+G+ + T+R ++LP + + S+E I Sbjct: 99 ALNTAAYSTQLFKGAFNAIPSGQWQACRALGMNKIATLR-VLLPYALRRAVPAYSNEVIL 157 Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + K TS+ASTITI ++ AQRI + TY L ++ YL + +I +IE Sbjct: 158 VFKGTSLASTITIMDLMGYAQRINAQTYDTLTVFGIAGAFYLAVNGILTLIFRQIEKKA 216 >gi|296113906|ref|YP_003627844.1| amino acid ABC transporter permease protein [Moraxella catarrhalis RH4] gi|295921600|gb|ADG61951.1| amino acid ABC transporter permease protein [Moraxella catarrhalis RH4] gi|326562227|gb|EGE12555.1| amino acid ABC transporter permease protein [Moraxella catarrhalis 7169] gi|326567181|gb|EGE17303.1| amino acid ABC transporter permease protein [Moraxella catarrhalis BC1] gi|326572017|gb|EGE22019.1| amino acid ABC transporter permease protein [Moraxella catarrhalis BC8] gi|326573964|gb|EGE23914.1| amino acid ABC transporter permease protein [Moraxella catarrhalis O35E] gi|326574955|gb|EGE24885.1| amino acid ABC transporter permease protein [Moraxella catarrhalis 101P30B1] Length = 240 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/164 (35%), Positives = 89/164 (54%), Gaps = 12/164 (7%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYG-----------LPHIG-IVFDSFVAIIISLTL 100 I+ I Y I RG P L+ +F IF+G + + G I F A + +L++ Sbjct: 46 ILQKIADAYTTIVRGIPELLMVFFIFFGGSIILVTIAKQMGYTGRIDVSQFWAGVTALSI 105 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 F AY +E+ R +I IPKGQW+++ +IG+T QT+ IILPQ + L + + +L Sbjct: 106 MFGAYATEVFRMAIQDIPKGQWESAQSIGMTPIQTLTRIILPQMWMVALPGLGNLTLVLL 165 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 K T++ S I + ++ AQR +T +P Y AF+YL LTS Sbjct: 166 KDTALVSLIGLQDLMYFAQRAAQSTQKPFTFYLAAAFIYLALTS 209 >gi|148925846|ref|ZP_01809533.1| amino-acid ABC transporter integral membrane protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145844832|gb|EDK21936.1| amino-acid ABC transporter integral membrane protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 233 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 20/200 (10%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I+ P L AA +T+ ++ + SLIIG F ++ +F I+ I Y+ Sbjct: 3 FDFILAQAPAFLTAA-WLTIKLSFFGIIFSLIIGLF-CILMSYFKIKILENICKLYIEFS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD------------------SFVAIIISLTLNFSAYIS 107 R TPLL+QLF ++Y LP I + SF +I+ L+ +Y++ Sbjct: 61 RNTPLLIQLFFLYYALPKFNIHLEQIPPLDLICLSVEETLRPSFACVIVGLSFLGGSYMA 120 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E +R+ +I K Q++A ++G ++ +R++ILPQ + S +S+ I ++K TSV S Sbjct: 121 ESLRAGFEAIRKQQFEAGLSLGFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVS 180 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I +P++ + + S TY+ Sbjct: 181 IIALPDLVNLMKSLNSLTYK 200 >gi|162418405|ref|YP_001604959.1| histidine transport system permease HisM [Yersinia pestis Angola] gi|162351220|gb|ABX85168.1| histidine ABC transporter, permease protein HisM [Yersinia pestis Angola] Length = 238 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 105/193 (54%), Gaps = 11/193 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + VTL + S V+ ++ +AV R+ I L + + +IFRGTPL VQL V Sbjct: 20 FTGMAVTLWLLISSVVMGGLLALPLAVARVS-ERRWIRLPVWIFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + I+ ++F I++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYSLEIIRGNDLLNAFFRSGLNCTILALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G +R + R IILP S S+E I +L ST++A T T+P+I + A+ I + TYQ Sbjct: 139 YGFSRFKLYRCIILPAASRISLPAYSNEVILMLHSTALAFTATVPDILKIARDINAATYQ 198 Query: 188 PLIIYCELAFVYL 200 P + A +YL Sbjct: 199 PFYAFSIAAVLYL 211 >gi|323967296|gb|EGB62719.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli M863] gi|327253648|gb|EGE65277.1| arginine transport system permease protein artM [Escherichia coli STEC_7v] Length = 222 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 121/218 (55%), Gaps = 14/218 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + + P+L+ + +L + S +++LI+ +I + ++ L+ Y+ +F GT Sbjct: 1 MFEYLPELM-KGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLV-RGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPTLQEYPVLWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW + A+G+++K T+ I+LP S S+E + + KSTS+A TIT+ E+ + Sbjct: 119 EGQWQSCSALGMSKKDTL-AILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMGYS 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 Q + TY ++++ +YL++ ++ IE Sbjct: 178 QLLYGRTYD-VMVFGAAGIIYLVVNGLLTLMMRLIERK 214 >gi|227891736|ref|ZP_04009541.1| glutamine-binding protein / glutamine transport system permease protein [Lactobacillus salivarius ATCC 11741] gi|227866461|gb|EEJ73882.1| glutamine-binding protein / glutamine transport system permease protein [Lactobacillus salivarius ATCC 11741] Length = 485 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 99/171 (57%), Gaps = 6/171 (3%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSF 91 + +IIGF + VI F+ + + + ++IFRG PLLV I+ G+P + G +F Sbjct: 303 IFGIIIGF-LGVIPNKFAQGVSTTV----IYIFRGLPLLVLALFIYNGIPSLTGTKIPAF 357 Query: 92 VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP 151 +A II+LTLN AY + ++ I ++ KGQ +A+ ++GL+ + ++ IILPQ I Sbjct: 358 IAGIITLTLNEGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKAMKKIILPQGIKIMVPS 417 Query: 152 LSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 ++FI LK TS+ S I I E+ QT + I++ + ++ + +YLI+ Sbjct: 418 FVNQFIITLKDTSILSIIGILELTQTGKIIIARNLEGFKVWAIIGLMYLIV 468 >gi|317494653|ref|ZP_07953065.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917255|gb|EFV38602.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 246 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 110/191 (57%), Gaps = 23/191 (12%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ ++TL I+ + V+S I+G +A +R S +SL + Y +FR TPLLVQLF Sbjct: 19 LWSGFLITLVISACTIVLSTILGLILAALRDS-SSRWLSLPVIAYSSVFRNTPLLVQLFF 77 Query: 77 IFYG----LPHIGI---------VFDS---------FVAIIISLTLNFSAYISEIIRSSI 114 ++G LP + + +FD F+A ++ LTL +A+ISE IR+ I Sbjct: 78 WYFGAGQLLPSVVMQWLNTPHEWMFDGWTIAWPSFEFLAGLVGLTLYSAAFISEEIRAGI 137 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 + GQ AS A+GL+ Q++R+++LPQ + + PL ++++I+K++S+ I + E+ Sbjct: 138 RGVASGQKQASQALGLSLWQSMRYVVLPQAVKIALPPLLGQYMNIIKNSSLTMAIGVAEL 197 Query: 175 FQTAQRIVSTT 185 ++++ + T Sbjct: 198 SYASRQVETET 208 >gi|319794876|ref|YP_004156516.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315597339|gb|ADU38405.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 220 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++ +P LL + T+ + I V+ +I+G A R + I+ YV + Sbjct: 7 FGAVLAEWP-LLLRGVAWTVGLTAIGTVLGMIVGTLCAWAR-SGGPAWLRAIVGTYVELI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP +VQLF IF+GLP G+ VA +I++ +N AY +EIIR+ I + PKGQ +A+ Sbjct: 65 RNTPFIVQLFFIFFGLPAAGVKLSPEVASVIAMVMNLGAYSTEIIRAGIEATPKGQIEAA 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++ L++ Q ++LP + + S+ I ++ ++V I+ E+ A I S Sbjct: 125 VSLALSKSQVFLRVVLPPALKKVWPSMVSQIIIVMLGSAVCGQISTEELSYAANLIQSRN 184 Query: 186 YQPLIIYCELAFVYLILT 203 ++ + +YL L+ Sbjct: 185 FRAFEAFIIATLIYLALS 202 >gi|313896660|ref|ZP_07830208.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312974577|gb|EFR40044.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 253 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 15/228 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +I++ P LL A + VTL +A IS ++G +A + + +L YV++ R Sbjct: 9 GMILEVLPDLL-AYLDVTLLVAGISIAAGSLLGGLLAWANLDGGRPLRAL-AAVYVYVMR 66 Query: 67 GTPLLVQLFVIFYGLPHI-----GIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIP 118 TP +V LF++FYGLP + GI + V +I+ TL F AYISE+ R++ ++P Sbjct: 67 CTPSIVLLFIVFYGLPKLLQGAFGIDMNGMNRAVFAVITFTLLFGAYISEVFRAAYKAVP 126 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ++A+ GL+ Q H++LPQ + + I++LK S+A TI + ++ Sbjct: 127 RGQYEAAVCAGLSPVQAFAHVMLPQAAIVALPNFGNASINLLKEGSLAYTIGLIDLIGKG 186 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 I++ + I +YL + + + +E TQ +DK Sbjct: 187 NLIIAQNFGAYGIE-----IYLACMLVYWAVVLLLEQVFTQVERRLDK 229 >gi|134294748|ref|YP_001118483.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia vietnamiensis G4] gi|134137905|gb|ABO53648.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC transporter membrane protein [Burkholderia vietnamiensis G4] Length = 246 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/185 (34%), Positives = 103/185 (55%), Gaps = 17/185 (9%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ +++VI+LI+G V+R + ++ + YV IFR PL+VQ FV Sbjct: 26 LMSGFWVTIEVSLVAWVIALIVGSLFGVLRTV-PNKWLAALGTVYVSIFRNIPLIVQFFV 84 Query: 77 IFYGLPHI--------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + +P + G F F A I+ L L A + E +RS I ++PKGQ Sbjct: 85 WYLVVPELLPASIGTWIKQLPPGTQF--FTASIVCLGLFTGARVCEQVRSGINALPKGQR 142 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 143 AAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLV 202 Query: 183 STTYQ 187 T Q Sbjct: 203 DYTAQ 207 >gi|292488871|ref|YP_003531758.1| histidine ABC transporter inner membrane protein [Erwinia amylovora CFBP1430] gi|292900016|ref|YP_003539385.1| histidine ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291199864|emb|CBJ46988.1| histidine ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291554305|emb|CBA21655.1| Histidine ABC transport system, inner membrane component [Erwinia amylovora CFBP1430] Length = 238 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 109/200 (54%), Gaps = 19/200 (9%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW----IFRGTPLLVQ 73 ++ + VTL + +S + + +++ R+ I F VW +FRGTPL VQ Sbjct: 20 FSGVAVTLWLLVVSVGLGGCMALLLSIARVSPYKAI-----RFPVWLFTYVFRGTPLYVQ 74 Query: 74 LFVIFYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 L V + G+ + +V ++F +++LTLN AY +E+ +I ++P G+ + Sbjct: 75 LLVFYSGMYTLEVVKGTELLNAFFRSGLNCTLLALTLNTCAYTTEVFAGAIRAVPHGEIE 134 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A G + + R II+P + T+ S+E I +L ST++A T T+P++ + A+ I S Sbjct: 135 AARAYGFSTFKLYRCIIMPSALRTALPAYSNEVILMLHSTALAFTATVPDLLKVARDINS 194 Query: 184 TTYQPLIIYCELAFVYLILT 203 TYQP I + A +YLI++ Sbjct: 195 ATYQPFIAFSLAAVLYLIIS 214 >gi|21221280|ref|NP_627059.1| amino acid ABC transporter transmembrane protein [Streptomyces coelicolor A3(2)] gi|256787535|ref|ZP_05525966.1| amino acid ABC transporter transmembrane protein [Streptomyces lividans TK24] gi|289771430|ref|ZP_06530808.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces lividans TK24] gi|6689163|emb|CAB65560.1| probable amino acid ABC transporter protein, integral membrane component [Streptomyces coelicolor A3(2)] gi|289701629|gb|EFD69058.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces lividans TK24] Length = 216 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 100/190 (52%), Gaps = 9/190 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI---ISLI 57 MK++W + + D P + ++VTL I + ++S +G A++ S + + ++ Sbjct: 1 MKWDW-SAVSDFMPHF-WDGLLVTLQILVLGSLVSFGLGLVWALLMRVPSRWVTWPVGVV 58 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 F R TPLLVQLF +FY LP I F + ++++ L++S Y ++ R+ I + Sbjct: 59 TEF----VRNTPLLVQLFFLFYVLPEWNITFSALTTGVVAIGLHYSTYTMQVYRAGIEGV 114 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQW+A+ A+ L ++T +ILPQ I L + IS+LK T + IT+ E+ Sbjct: 115 PVGQWEAATALNLPMRRTWTAVILPQAIRRVTPALGNYVISMLKDTPLLMAITVLEMLGE 174 Query: 178 AQRIVSTTYQ 187 A+ +Q Sbjct: 175 ARLFSQQNFQ 184 >gi|323527326|ref|YP_004229479.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323384328|gb|ADX56419.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 246 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/183 (36%), Positives = 102/183 (55%), Gaps = 13/183 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ ++VI+LI+G F V+R + S I YV IFR PL+VQ F Sbjct: 26 LLSGFWVTITVSLSAWVIALIVGSFFGVLRTV-PNKWASGIGTVYVAIFRNIPLIVQFFT 84 Query: 77 IFYGLPH-----IGIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + +P IG F F A II L L +A + E +RS I ++P+GQ A Sbjct: 85 WYLVIPELLPVSIGNWFKQLPPGAQFFSASIICLGLFTAARVCEQVRSGINALPRGQRAA 144 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 145 GLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDY 204 Query: 185 TYQ 187 T Q Sbjct: 205 TSQ 207 >gi|295677663|ref|YP_003606187.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] gi|295437506|gb|ADG16676.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 246 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/222 (30%), Positives = 116/222 (52%), Gaps = 13/222 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + VT+ ++ ++VI+LI+G V+R + S + YV IFR PL+VQ F+ Sbjct: 26 LLSGLWVTVTVSLSAWVIALIVGSLFGVLRTV-PNKWASGVGTVYVAIFRNIPLIVQFFI 84 Query: 77 IFYGLPH-----IGIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + +P IG F F A I+ L L +A + E +RS I ++P+GQ A Sbjct: 85 WYLVIPELLPVSIGTWFKQLPPSAQFFSASIVCLGLFTAARVCEQVRSGINALPRGQRAA 144 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 145 GLAVGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDY 204 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 T Q + + Y+++ ++ +E+ Y K Sbjct: 205 TSQTYESFIAVTVAYMLINLVVMLLMRWVEAKTRLPGYIGGK 246 >gi|256827732|ref|YP_003151691.1| amino acid ABC transporter membrane protein [Cryptobacterium curtum DSM 15641] gi|256583875|gb|ACU95009.1| amino acid ABC transporter membrane protein [Cryptobacterium curtum DSM 15641] Length = 212 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 101/174 (58%), Gaps = 7/174 (4%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 LL + + +T I ++ V +L +G +A+ R+ + + + FY+ + RGTPL++QL Sbjct: 4 LLGSGLTLTAQIFFVTLVGALPLGVVVALCRMSRFKPL-AWLAAFYISVLRGTPLMLQLM 62 Query: 76 VIFYGLPH--IGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + + +P+ G+ S F A I +N++AY +EI RS I SIP+GQ++A+ +G Sbjct: 63 ALMF-VPYYLFGLQLGSDWKFWACDIGFVINYAAYFAEIYRSGIQSIPRGQYEAAEVLGY 121 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 TR QT I+LPQ + +E I+++K TS+A + I E+F A+ I ++ Sbjct: 122 TRGQTFMRIVLPQVFKRILPSMGNEVITLVKDTSLAFVLGIMEMFTQAKAIAAS 175 >gi|168817911|ref|ZP_02829911.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205344900|gb|EDZ31664.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086788|emb|CBY96560.1| Nopaline transport system permease protein nocQ [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 228 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V++++IG A ++ + + LI Y + RG P L Sbjct: 4 GFSGVILQGAIVTLELALSSVVLAVLIGLVGAGAKLS-QNRVTGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP-HIGIVFDSF----------VAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL + +V DS VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNVVTDSLGIDQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G T +QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTHRQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T++P +YL+ T+ + + +E + D Sbjct: 183 AGKSTWEPFYFAVVCGLIYLVFTTVSNGVLLLLERRYSVGVKRAD 227 >gi|329997346|ref|ZP_08302729.1| arginine/ornithine transport protein [Klebsiella sp. MS 92-3] gi|328539095|gb|EGF65131.1| arginine/ornithine transport protein [Klebsiella sp. MS 92-3] Length = 235 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 112/225 (49%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F Q++ +VTL +A S V++++IG A ++ S+ ++L+ Y + RG P L Sbjct: 11 GFSQVILQGALVTLELALSSVVLAVLIGLAGAGAKLS-SNRPLALVFEGYTTLIRGVPDL 69 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G+ D +A II+L + AY +E R + +++PKG Sbjct: 70 VLMLLIFYGLQIALNSVTDALGMAQFDIDPMIAGIITLGFIYGAYFTETFRGAYLAVPKG 129 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G + QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 130 HIEAATAFGFSGGQTFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 189 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T+QP +YL+ T+ + + +E T D Sbjct: 190 AGKSTWQPFYFAIVCGLIYLVFTTVSNGVLLLLERRYTVGVKRAD 234 >gi|304396807|ref|ZP_07378687.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304355603|gb|EFM19970.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 216 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 51/156 (32%), Positives = 92/156 (58%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y+ + RGTP +VQLFV+F+ LP +G+ +A +I++ N AY++EI+R + + Sbjct: 55 RLYISLMRGTPAIVQLFVVFFTLPRLGLGGHPMLAAVIAIGFNSGAYVAEILRVNQSLVT 114 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+ +GL+R T ++I PQ + +S L SEF +LK+T +AS + + E+ Sbjct: 115 RGQREAARTLGLSRWLTWWYVINPQVVRSSLPMLVSEFTILLKTTPLASVVALTELTYAG 174 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Q +++ TY+ + +A YL++ I ++E Sbjct: 175 QIVIARTYEATQVLLLVAAGYLLIALPLMRIARRLE 210 >gi|171059368|ref|YP_001791717.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix cholodnii SP-6] gi|171060693|ref|YP_001793042.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix cholodnii SP-6] gi|170776813|gb|ACB34952.1| polar amino acid ABC transporter, inner membrane subunit [Leptothrix cholodnii SP-6] gi|170778138|gb|ACB36277.1| polar amino acid ABC transporter, inner membrane subunit [Leptothrix cholodnii SP-6] Length = 247 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 111/197 (56%), Gaps = 4/197 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL +A ++ +++L +G + + R S +++L + + +FR PLLVQ+F+ ++ LP Sbjct: 42 TLSVAVLALIVALAVGSLMGIFRTTPSRALVAL-GNSWTELFRNIPLLVQIFLWYHVLPQ 100 Query: 84 IGIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 I SF+ +++ L SA +SE +++ I ++PKGQ A A+GLT QT R+++ Sbjct: 101 IFPSLQAIPSFILVVVGLGFFTSARVSEQVKAGIQTLPKGQRYAGLAMGLTLPQTYRYVL 160 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LP PL+SE ++I+K++SVA +++ E+ A + T + + IY + +Y Sbjct: 161 LPMAFRIVIPPLTSESMNIIKNSSVAFAVSVTELTMFAMQAQEETSRGVEIYLAVTALYF 220 Query: 201 ILTSFCYIIQIKIESSV 217 I F + + IE V Sbjct: 221 ISAFFINRVALFIEHRV 237 >gi|307730961|ref|YP_003908185.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307585496|gb|ADN58894.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 246 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/183 (35%), Positives = 101/183 (55%), Gaps = 13/183 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ ++VI+LI+G F V+R + S + YV IFR PL+VQ F Sbjct: 26 LLSGFWVTITVSLSAWVIALIVGSFFGVLRTV-PNKWASGVGTVYVAIFRNIPLIVQFFT 84 Query: 77 IFYGLPH-----IGIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + +P IG F F A II L L A + E +RS I ++P+GQ A Sbjct: 85 WYLVIPELLPVSIGTWFKQLPPGAQFFSASIICLGLFTGARVCEQVRSGINALPRGQRAA 144 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 145 GLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDY 204 Query: 185 TYQ 187 T Q Sbjct: 205 TSQ 207 >gi|169334070|ref|ZP_02861263.1| hypothetical protein ANASTE_00463 [Anaerofustis stercorihominis DSM 17244] gi|169258787|gb|EDS72753.1| hypothetical protein ANASTE_00463 [Anaerofustis stercorihominis DSM 17244] Length = 216 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/172 (33%), Positives = 101/172 (58%), Gaps = 5/172 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + +V ++ I ++ + SL +G +A R+ + ++ Y+ I RGTPL++QL V Sbjct: 10 LSSGMVTSIEIFVLTLLFSLPLGLVVAFGRMS-KIAPVRWLVKIYISIMRGTPLMLQLMV 68 Query: 77 IFYGLPHI-GIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 +F+G +I G+ S VA++I +N++AY +EI R I S+P GQ++A+ +G + Sbjct: 69 VFWGPYYIFGMQISSSYRMVAVLIGFAVNYAAYFAEIYRGGIESMPDGQYEAAKLLGYNK 128 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 QT II PQ I ++E I+++K TS++ I IPE+F A++I + Sbjct: 129 FQTFFIIIFPQVIKRILPATANEVITLVKDTSLSFVIAIPEMFTMAKQIAAA 180 >gi|320530102|ref|ZP_08031172.1| ABC transporter, permease protein [Selenomonas artemidis F0399] gi|320137535|gb|EFW29447.1| ABC transporter, permease protein [Selenomonas artemidis F0399] Length = 244 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 118/229 (51%), Gaps = 19/229 (8%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +I++ P LL A + VTL +A IS ++G +A + + + +L YV++ R Sbjct: 1 MILEVLPDLL-AYLDVTLLVAGISIAAGSLLGGLLAWANLGGARPLRAL-AAVYVYVMRC 58 Query: 68 TPLLVQLFVIFYGLPHI-----GIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPK 119 TP +V LF++FYGLP + GI + V +I+ TL F AYISE+ R++ ++P+ Sbjct: 59 TPSIVLLFIVFYGLPKLLQGAFGIDMNGMNRAVFAVITFTLLFGAYISEVFRAAYKAVPR 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ GL+ Q H++LPQ + + I++LK S+A TI + ++ Sbjct: 119 GQYEAAICAGLSPVQAFAHVMLPQAAIVALPNFGNASINLLKEGSLAYTIGLIDLIGKGN 178 Query: 180 RIVSTTYQP--LIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 I++ + + IY VY + + + +E TQ +DK Sbjct: 179 LIIAQNFGAYGIEIYLACMLVY-------WAVVLLLEQVFTQVERRLDK 220 >gi|319407434|emb|CBI81085.1| glutamate/aspartate transport system permease protein GltJ [Bartonella sp. 1-1C] Length = 250 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/194 (32%), Positives = 109/194 (56%), Gaps = 7/194 (3%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMH----FYVWIFRGTPLLVQLFVIFYGLPHI-- 84 S V+++ +G I +IR +II+ + F+V I R PLLVQ+F+ ++ +P I Sbjct: 47 SLVLAVFMGVIIGMIRTLPKTSIINNFLRAVGTFWVEIMRNIPLLVQVFLWYFVVPKIYP 106 Query: 85 -GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + F + II +L SA I+E +RS I SIP GQ A+ A+G Q+ R+IILP+ Sbjct: 107 PAMNFPPILLIICALGFFTSARIAEQVRSGIESIPSGQRYAAMAMGFNTYQSYRYIILPR 166 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I T PL+SE + I+K++S+A ++I E+ Q + + Y + +Y++++ Sbjct: 167 AIRTIMPPLTSEAMGIVKNSSIAFAVSINELMQFQYQTIEEVSHVYENYLLVTLLYIVIS 226 Query: 204 SFCYIIQIKIESSV 217 F +++ IE ++ Sbjct: 227 LFIFVLMTIIEKAI 240 >gi|312959433|ref|ZP_07773950.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] gi|311286150|gb|EFQ64714.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] Length = 242 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 12/216 (5%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + F LL +TL ++ +S +S+++G A ++ S + + Y + RG P Sbjct: 16 LKGFGPLLLQGTWMTLKLSVLSLAVSVLLGLLGASAKLS-SLPFLRIPAQLYTTLIRGVP 74 Query: 70 LLVQLFVIFYGLPH--IG---------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 LV + +IFY L G I D F A +I+L + AY +E R +I+++P Sbjct: 75 DLVLMLLIFYSLQTWLTGLTDFMEWEYIEIDPFSAGVITLGFIYGAYFTETFRGAILAVP 134 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+ A GL R Q R++ PQ + + + + ++ +LK+T++ S I + ++ + A Sbjct: 135 RGQLEAATAYGLKRGQRFRYVTFPQMMRFALPGIGNNWMVMLKATALVSIIGLADLVKAA 194 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Q +TYQ A +YL++TS + ++E Sbjct: 195 QDAGKSTYQLFYFLVLAALIYLLITSASNFVLRRLE 230 >gi|309390081|gb|ADO77961.1| amino acid ABC transporter membrane protein 1, PAAT family [Halanaerobium praevalens DSM 2228] Length = 228 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/199 (29%), Positives = 116/199 (58%), Gaps = 2/199 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +I ++ P LL +V T+ + S +I ++IG +A + + + ++ ++ Y + Sbjct: 4 LEIIKEALPYLLEGTLV-TIQLTFWSLLIGVVIGLPVAFAQAY-GNKLVQALVAVYERLA 61 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R PLL+ L ++ +GLP +G+ F A +I + L +AY S+I R +I S+ Q +A+ Sbjct: 62 RSIPLLLILLLLNFGLPMLGLQISIFKAAVIGIGLRSAAYQSQIYRGAIQSVGGSQMNAA 121 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+++ + +II PQ I + P+++E +LK TS+A TI + E+ + + ++T Sbjct: 122 LSLGMSKMKAFFYIISPQAIRIALPPVANESAIVLKDTSLAFTIGVVELLRQGEYFIATA 181 Query: 186 YQPLIIYCELAFVYLILTS 204 +P++IY +A +Y +LT+ Sbjct: 182 NRPMLIYLTIAAIYFVLTT 200 >gi|294636990|ref|ZP_06715312.1| arginine ABC transporter, permease protein ArtM [Edwardsiella tarda ATCC 23685] gi|291089818|gb|EFE22379.1| arginine ABC transporter, permease protein ArtM [Edwardsiella tarda ATCC 23685] Length = 222 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/171 (30%), Positives = 99/171 (57%), Gaps = 12/171 (7%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFS 103 ++L++ Y+ +F GTPLLVQ+F+I+YG + ++ ++ +++L LN + Sbjct: 44 LTLLVQGYITLFTGTPLLVQIFLIYYGPGQFAWIRETPWLWSALSQPWLCAMLALALNSA 103 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AY +++ ++ +IP GQW + A+G+++ QT+R I+LP + S+E + I KST Sbjct: 104 AYSTQLFYGAMRAIPNGQWQSCAALGMSKGQTLR-ILLPYAFKRALSSYSNEVVLIFKST 162 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S+A TIT+ E+ AQ++ TY ++++ VYL + ++ IE Sbjct: 163 SLAYTITLMEVMGYAQQLYGRTYD-VMVFGAAGVVYLCVNGLLTLMMRLIE 212 >gi|288905438|ref|YP_003430660.1| amino acid ABC transporter permease [Streptococcus gallolyticus UCN34] gi|288732164|emb|CBI13729.1| putative amino acid ABC transporter, permease protein [Streptococcus gallolyticus UCN34] Length = 227 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 102/182 (56%), Gaps = 1/182 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+V+T+ +A + +L++G I++I+ ++ ++S I Y+ + R TPLL+QL+ +++ Sbjct: 17 ALVLTIRLAFFGILGALVLGLLISLIK-YYKIPVLSQICQVYIELSRNTPLLIQLYFLYF 75 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP IGI+ S + ++ L +Y++E RS + +I K Q++ +IGL Q ++ Sbjct: 76 GLPKIGIILSSEMCAVVGLIFLGGSYMAESFRSGLEAISKTQYEVGLSIGLKPVQNFFYV 135 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I PQ + S L + I ++K TSV S + + ++ A+ ++ Y+ L Y Sbjct: 136 IFPQALAVSLPSLVANVIFLIKETSVFSIVALADLMYVAKDLIGLYYETDEALLMLVLAY 195 Query: 200 LI 201 LI Sbjct: 196 LI 197 >gi|261213024|ref|ZP_05927308.1| amino acid ABC transporter permease protein [Vibrio sp. RC341] gi|260838089|gb|EEX64766.1| amino acid ABC transporter permease protein [Vibrio sp. RC341] Length = 265 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/140 (35%), Positives = 90/140 (64%), Gaps = 3/140 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQ++++++ P IG+ D F +++L L AY +E+ R + SIP+ Sbjct: 103 YIAVVRNTPLLVQIYLLYFVFGPVIGL--DRFATAVLALALFQGAYTAEVFRGGLNSIPQ 160 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A++++GL+R T +ILPQ + + PL++E +S++K++S+ S + I ++ + Sbjct: 161 GQYEAAHSLGLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGR 220 Query: 180 RIVSTTYQPLIIYCELAFVY 199 IVS T P I+ +A +Y Sbjct: 221 NIVSETAMPFEIWFSVAAIY 240 >gi|153800711|ref|ZP_01955297.1| arginine ABC transporter, permease protein [Vibrio cholerae MZO-3] gi|124123686|gb|EAY42429.1| arginine ABC transporter, permease protein [Vibrio cholerae MZO-3] Length = 222 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 97/179 (54%), Gaps = 18/179 (10%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI---------IISL 98 +FS +I+L F GTPLLVQ+F+++YG + +S + + +++L Sbjct: 47 WFSRAVITL--------FTGTPLLVQIFLVYYGPGQFEWIRESVLWVWLSQPWFCAMLAL 98 Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158 LN +AY +++ + + +IP GQW A A+G+ + T+R ++LP + + S+E I Sbjct: 99 ALNTAAYSTQLFKGAFNAIPSGQWQACRALGMNKIATLR-VLLPYALRRAVPAYSNEVIL 157 Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + K TS+ASTITI ++ AQRI + TY L ++ YL + +I +IE Sbjct: 158 VFKGTSLASTITIMDLMGYAQRINAQTYDTLTVFGIAGAFYLTVNGILTLIFRQIEKKA 216 >gi|323698192|ref|ZP_08110104.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323458124|gb|EGB13989.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 336 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 110/200 (55%), Gaps = 16/200 (8%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 LL ++T+ ++ IS ++IG F + RI S+ + + Y+ + RGTPLLVQ+ Sbjct: 124 LLLEGTLITIEVSIISIFFGILIGLFTGLSRIS-SNPFLKMSAITYIELIRGTPLLVQIM 182 Query: 76 VIFYGLPHIGIVFDSFVAI------------IISLTLNFSAYISEIIRSSIISIPKGQWD 123 + ++ L G + ++ + + SL + AY++EI+R+ I SI KGQ + Sbjct: 183 IWYFVL---GTILNNLLIKAGLFQIPELWFGVASLAIFAGAYVAEIVRAGIQSIHKGQME 239 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++G+T+ +R IILPQ PL+ +FIS++K +S+ + I E+ + + V+ Sbjct: 240 AARSLGMTKVTAMRKIILPQAFKRILPPLAGQFISLIKDSSLLGVMAIRELTKATREAVT 299 Query: 184 TTYQPLIIYCELAFVYLILT 203 T+ P ++ +YL++T Sbjct: 300 TSLMPYELWFVCGVLYLVIT 319 >gi|153829858|ref|ZP_01982525.1| arginine ABC transporter, permease protein [Vibrio cholerae 623-39] gi|227812324|ref|YP_002812334.1| arginine ABC transporter, permease protein [Vibrio cholerae M66-2] gi|254226188|ref|ZP_04919783.1| arginine ABC transporter, permease protein [Vibrio cholerae V51] gi|254285778|ref|ZP_04960741.1| arginine ABC transporter, permease protein [Vibrio cholerae AM-19226] gi|298499553|ref|ZP_07009359.1| arginine ABC transporter [Vibrio cholerae MAK 757] gi|125621290|gb|EAZ49629.1| arginine ABC transporter, permease protein [Vibrio cholerae V51] gi|148874659|gb|EDL72794.1| arginine ABC transporter, permease protein [Vibrio cholerae 623-39] gi|150424275|gb|EDN16213.1| arginine ABC transporter, permease protein [Vibrio cholerae AM-19226] gi|227011466|gb|ACP07677.1| arginine ABC transporter, permease protein [Vibrio cholerae M66-2] gi|297541534|gb|EFH77585.1| arginine ABC transporter [Vibrio cholerae MAK 757] Length = 222 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 97/179 (54%), Gaps = 18/179 (10%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI---------IISL 98 +FS +I+L F GTPLLVQ+F+++YG + +S + + +++L Sbjct: 47 WFSRAVITL--------FTGTPLLVQIFLVYYGPGQFEWIRESVLWVWLSQPWFCAMLAL 98 Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158 LN +AY +++ + + +IP GQW A A+G+ + T+R ++LP + + S+E I Sbjct: 99 ALNTAAYSTQLFKGAFNAIPSGQWQACRALGMNKIATLR-VLLPYALRRAVPAYSNEVIL 157 Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + K TS+ASTITI ++ AQRI + TY L ++ YL + +I +IE Sbjct: 158 VFKGTSLASTITIMDLMGYAQRINAQTYDTLTVFGIAGAFYLTVNGILTLIFRQIEKKA 216 >gi|320160626|ref|YP_004173850.1| amino acid ABC transporter permease protein [Anaerolinea thermophila UNI-1] gi|319994479|dbj|BAJ63250.1| amino acid ABC transporter permease protein [Anaerolinea thermophila UNI-1] Length = 291 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 110/216 (50%), Gaps = 36/216 (16%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLIMHFYVWIFRGTPLLVQL 74 A I VT+ +FVISL+IG + RI FF + + YV I RG P+LV + Sbjct: 61 AGIHVTITTTLTAFVISLVIGLMAGLGRIARNVFFRN-----LSTLYVEIVRGIPMLVLI 115 Query: 75 FVI-FYGLPHIGIVFDSF--------------------------VAIIISLTLNFSAYIS 107 F I F +P + ++ + II+L++ + A+ + Sbjct: 116 FFIAFVAVPAVTSALNALGRVLVEAGLTWAGGLTQLENSGVPMQIRAIIALSVTYGAFSA 175 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E+ R+ I SIPKGQ +A+ + G+T Q +R++ILPQ I L ++F+S+LK +S+ S Sbjct: 176 EVFRAGIQSIPKGQMEAARSQGMTYWQAMRYVILPQAIRNVLPALGNDFVSMLKDSSLVS 235 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + +I Q A+ T++ + LA +YLI+T Sbjct: 236 VLAVRDITQVARLYAGQTFRYPEAFTTLAVLYLIMT 271 >gi|262403803|ref|ZP_06080361.1| arginine ABC transporter permease protein ArtM [Vibrio sp. RC586] gi|262350307|gb|EEY99442.1| arginine ABC transporter permease protein ArtM [Vibrio sp. RC586] Length = 222 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 18/178 (10%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI---------IISL 98 +FS +I+L F GTPLLVQ+F+++YG + +S + + +++L Sbjct: 47 WFSRAVITL--------FTGTPLLVQIFLVYYGPGQFEWIRESVLWVWLSQPWFCAMLAL 98 Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158 LN +AY +++ + + +IP GQW A A+G+ + T+R ++LP + + S+E I Sbjct: 99 ALNTAAYSTQLFKGAFNAIPSGQWQACRALGMNKIATLR-VLLPYALRRAVPTYSNEVIL 157 Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 + K TS+ASTITI ++ AQRI + TY L ++ YL + +I +IE Sbjct: 158 VFKGTSLASTITIMDLMGYAQRINAQTYDTLTVFGVAGAFYLTVNGILTLIFRQIEKK 215 >gi|153824333|ref|ZP_01977000.1| arginine ABC transporter, permease protein [Vibrio cholerae MZO-2] gi|149741887|gb|EDM55916.1| arginine ABC transporter, permease protein [Vibrio cholerae MZO-2] Length = 222 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 97/179 (54%), Gaps = 18/179 (10%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI---------IISL 98 +FS +I+L F GTPLLVQ+F+++YG + +S + + +++L Sbjct: 47 WFSRAVITL--------FTGTPLLVQIFLVYYGPGQFEWIRESVLWVWLSQPWFCAMLAL 98 Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158 LN +AY +++ + + +IP GQW A A+G+ + T+R ++LP + + S+E I Sbjct: 99 ALNTAAYSTQLFKGAFNAIPSGQWQACRALGMNKIATLR-VLLPYALRRAVPAYSNEVIL 157 Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + K TS+ASTITI ++ AQRI + TY L ++ YL + +I +IE Sbjct: 158 VFKGTSLASTITIMDLMGYAQRINAQTYDTLTVFGIAGAFYLTVNGILTLIFRQIEKKA 216 >gi|22125503|ref|NP_668926.1| histidine transport system permease HisQ [Yersinia pestis KIM 10] gi|45442178|ref|NP_993717.1| histidine transport system permease HisQ [Yersinia pestis biovar Microtus str. 91001] gi|51596928|ref|YP_071119.1| ABC histidine transporter, permease subunit HisQ [Yersinia pseudotuberculosis IP 32953] gi|108808062|ref|YP_651978.1| histidine transport system permease HisQ [Yersinia pestis Antiqua] gi|108812334|ref|YP_648101.1| histidine transport system permease protein HisQ [Yersinia pestis Nepal516] gi|145599264|ref|YP_001163340.1| histidine transport system permease protein HisQ [Yersinia pestis Pestoides F] gi|149365249|ref|ZP_01887284.1| histidine transport system permease protein HisQ [Yersinia pestis CA88-4125] gi|153950649|ref|YP_001400408.1| histidine ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|162418808|ref|YP_001604960.1| histidine transport system permease HisQ [Yersinia pestis Angola] gi|165925202|ref|ZP_02221034.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis biovar Orientalis str. F1991016] gi|165937200|ref|ZP_02225765.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis biovar Orientalis str. IP275] gi|166008559|ref|ZP_02229457.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis biovar Antiqua str. E1979001] gi|166214201|ref|ZP_02240236.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis biovar Antiqua str. B42003004] gi|167399503|ref|ZP_02305027.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421208|ref|ZP_02312961.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424744|ref|ZP_02316497.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469030|ref|ZP_02333734.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis FV-1] gi|186896008|ref|YP_001873120.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|218929847|ref|YP_002347722.1| histidine transport system permease HisQ [Yersinia pestis CO92] gi|229838347|ref|ZP_04458506.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895377|ref|ZP_04510550.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|229898913|ref|ZP_04514058.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229902687|ref|ZP_04517804.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|270490136|ref|ZP_06207210.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294504640|ref|YP_003568702.1| histidine transport system permease protein HisQ [Yersinia pestis Z176003] gi|21958400|gb|AAM85177.1|AE013764_1 histidine ABC transport system inner membrane permease [Yersinia pestis KIM 10] gi|45437042|gb|AAS62594.1| histidine transport system permease protein HisQ [Yersinia pestis biovar Microtus str. 91001] gi|51590210|emb|CAH21847.1| ABC histidine transporter, permease subunit HisQ [Yersinia pseudotuberculosis IP 32953] gi|108775982|gb|ABG18501.1| histidine transport system permease protein HisQ [Yersinia pestis Nepal516] gi|108779975|gb|ABG14033.1| histidine transport system permease protein HisQ [Yersinia pestis Antiqua] gi|115348458|emb|CAL21394.1| histidine transport system permease protein HisQ [Yersinia pestis CO92] gi|145210960|gb|ABP40367.1| histidine transport system permease protein HisQ [Yersinia pestis Pestoides F] gi|149291662|gb|EDM41736.1| histidine transport system permease protein HisQ [Yersinia pestis CA88-4125] gi|152962144|gb|ABS49605.1| histidine ABC transporter, permease protein HisQ [Yersinia pseudotuberculosis IP 31758] gi|162351623|gb|ABX85571.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis Angola] gi|165915063|gb|EDR33675.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis biovar Orientalis str. IP275] gi|165922809|gb|EDR39960.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis biovar Orientalis str. F1991016] gi|165992941|gb|EDR45242.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis biovar Antiqua str. E1979001] gi|166204557|gb|EDR49037.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis biovar Antiqua str. B42003004] gi|166960697|gb|EDR56718.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167052007|gb|EDR63415.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056626|gb|EDR66395.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis biovar Mediaevalis str. K1973002] gi|186699034|gb|ACC89663.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|229680134|gb|EEO76233.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|229688461|gb|EEO80532.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229694713|gb|EEO84760.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701685|gb|EEO89711.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|262362701|gb|ACY59422.1| histidine transport system permease protein HisQ [Yersinia pestis D106004] gi|262366628|gb|ACY63185.1| histidine transport system permease protein HisQ [Yersinia pestis D182038] gi|270338640|gb|EFA49417.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294355099|gb|ADE65440.1| histidine transport system permease protein HisQ [Yersinia pestis Z176003] gi|320014577|gb|ADV98148.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 228 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 106/207 (51%), Gaps = 12/207 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D + +L++ +VTL +A S ++S++IG A ++ S+ ++S + Y + RG Sbjct: 1 MLDGYSKLIFEGALVTLELALFSVLLSVVIGLMGAGGKLS-SNRLVSGLFECYTTLIRGV 59 Query: 69 PLLVQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISI 117 P LV + +IFYGL +G V D A +I+L + AY +E R + +++ Sbjct: 60 PDLVLMLLIFYGLQITLNSITESLGFVQIDIDPLSAGVITLGFIYGAYFTETFRGAYMAV 119 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ +A+ A G T Q R I+ P + + + + + ILK+T++ S + + ++ + Sbjct: 120 SKGQIEAATAFGFTSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKA 179 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTS 204 Q TYQP +YL T+ Sbjct: 180 TQLAGKGTYQPFFFALVAGAIYLFFTT 206 >gi|290580110|ref|YP_003484502.1| putative amino acid ABC transporter permease [Streptococcus mutans NN2025] gi|254997009|dbj|BAH87610.1| putative amino acid ABC transporter permease protein [Streptococcus mutans NN2025] Length = 240 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 106/183 (57%), Gaps = 6/183 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 TL ++ + ++SLI+G + S T ++ I YV IF+ TPLLVQ ++YGL Sbjct: 39 TLEMSVFALLLSLILGVIFGAMSS--SKTKLLKGIARVYVEIFQNTPLLVQFVFVYYGLA 96 Query: 83 ---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + ++ +F ++ + + AYI+E+IRS I ++P+GQ +A+ + G T ++T+ I Sbjct: 97 IMTNGAVMISAFFTAVLCVGIYHGAYIAEVIRSGIEAVPRGQTEAALSQGFTYQETMSLI 156 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ I T P++++ ++++K+TS + I+ +I TA+ T + + AF+Y Sbjct: 157 ILPQAIRTILPPMTNQVVNLIKNTSTVAIISGADIMFTAKAWAYETTNYIPAFAGAAFLY 216 Query: 200 LIL 202 I+ Sbjct: 217 FIM 219 >gi|15601512|ref|NP_233143.1| arginine transporter permease subunit ArtM [Vibrio cholerae O1 biovar eltor str. N16961] gi|147672214|ref|YP_001215535.1| arginine transporter permease subunit ArtM [Vibrio cholerae O395] gi|153818652|ref|ZP_01971319.1| arginine ABC transporter, permease protein [Vibrio cholerae NCTC 8457] gi|153820681|ref|ZP_01973348.1| arginine ABC transporter, permease protein [Vibrio cholerae B33] gi|229506086|ref|ZP_04395595.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae BX 330286] gi|229510057|ref|ZP_04399537.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae B33] gi|229516382|ref|ZP_04405829.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae RC9] gi|229522317|ref|ZP_04411733.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae TM 11079-80] gi|229526722|ref|ZP_04416126.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae bv. albensis VL426] gi|229528370|ref|ZP_04417761.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae 12129(1)] gi|229605617|ref|YP_002876321.1| arginine transporter permease subunit ArtM [Vibrio cholerae MJ-1236] gi|254849918|ref|ZP_05239268.1| arginine ABC transporter [Vibrio cholerae MO10] gi|255746482|ref|ZP_05420429.1| arginine ABC transporter permease protein ArtM [Vibrio cholera CIRS 101] gi|262152377|ref|ZP_06028510.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae INDRE 91/1] gi|262168599|ref|ZP_06036295.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae RC27] gi|262189844|ref|ZP_06048177.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae CT 5369-93] gi|297580209|ref|ZP_06942136.1| arginine transporter permease subunit ArtM [Vibrio cholerae RC385] gi|9658179|gb|AAF96655.1| arginine ABC transporter, permease protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|126510805|gb|EAZ73399.1| arginine ABC transporter, permease protein [Vibrio cholerae NCTC 8457] gi|126521724|gb|EAZ78947.1| arginine ABC transporter, permease protein [Vibrio cholerae B33] gi|146314597|gb|ABQ19137.1| arginine ABC transporter, permease protein [Vibrio cholerae O395] gi|227015182|gb|ACP11391.1| arginine ABC transporter, permease protein [Vibrio cholerae O395] gi|229334732|gb|EEO00218.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae 12129(1)] gi|229336880|gb|EEO01898.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae bv. albensis VL426] gi|229340302|gb|EEO05308.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae TM 11079-80] gi|229346263|gb|EEO11234.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae RC9] gi|229352502|gb|EEO17442.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae B33] gi|229356437|gb|EEO21355.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae BX 330286] gi|229372103|gb|ACQ62525.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae MJ-1236] gi|254845623|gb|EET24037.1| arginine ABC transporter [Vibrio cholerae MO10] gi|255736236|gb|EET91634.1| arginine ABC transporter permease protein ArtM [Vibrio cholera CIRS 101] gi|262023128|gb|EEY41833.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae RC27] gi|262030828|gb|EEY49459.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae INDRE 91/1] gi|262034275|gb|EEY52682.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae CT 5369-93] gi|297535855|gb|EFH74689.1| arginine transporter permease subunit ArtM [Vibrio cholerae RC385] gi|327485763|gb|AEA80169.1| Arginine ABC transporter, permease protein ArtM [Vibrio cholerae LMA3894-4] Length = 222 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 97/179 (54%), Gaps = 18/179 (10%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI---------IISL 98 +FS +I+L F GTPLLVQ+F+++YG + +S + + +++L Sbjct: 47 WFSRAVITL--------FTGTPLLVQIFLVYYGPGQFEWIRESVLWVWLSQPWFCAMLAL 98 Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158 LN +AY +++ + + +IP GQW A A+G+ + T+R ++LP + + S+E I Sbjct: 99 ALNTAAYSTQLFKGAFNAIPSGQWQACRALGMNKIATLR-VLLPYALRRAVPAYSNEVIL 157 Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + K TS+ASTITI ++ AQRI + TY L ++ YL + +I +IE Sbjct: 158 VFKGTSLASTITIMDLMGYAQRINAQTYDTLTVFGIAGAFYLAVNGILTLIFRQIEKKA 216 >gi|89899054|ref|YP_521525.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89343791|gb|ABD67994.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 222 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 56/142 (39%), Positives = 87/142 (61%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TPLL QL+ +++GLP G++ V II+L++N AY+SEIIRS I+SIP G Sbjct: 60 YVDVIRATPLLAQLYFLYFGLPSFGVIMPETVIGIIALSINSGAYVSEIIRSGIMSIPHG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +AS + G+ Q +R IILPQ + PL + I ++K +S+ S I++ E+ + Q Sbjct: 120 QVEASASSGMNYWQQMRLIILPQALRPMVSPLIGQAIVLVKDSSLLSLISVLELTRAGQT 179 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 + + + P+ A YLI+ Sbjct: 180 LANDRFMPVEGLATTAVGYLII 201 >gi|24379910|ref|NP_721865.1| putative amino acid ABC transporter, permease protein [Streptococcus mutans UA159] gi|24377889|gb|AAN59171.1|AE014984_6 putative amino acid ABC transporter, permease protein [Streptococcus mutans UA159] Length = 234 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 106/183 (57%), Gaps = 6/183 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 TL ++ + ++SLI+G + S T ++ I YV IF+ TPLLVQ ++YGL Sbjct: 33 TLEMSVFALLLSLILGVIFGAMSS--SKTKLLKGIARVYVEIFQNTPLLVQFVFVYYGLA 90 Query: 83 ---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + ++ +F ++ + + AYI+E+IRS I ++P+GQ +A+ + G T ++T+ I Sbjct: 91 IMTNGAVMISAFFTAVLCVGIYHGAYIAEVIRSGIEAVPRGQTEAALSQGFTYQETMSLI 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ I T P++++ ++++K+TS + I+ +I TA+ T + + AF+Y Sbjct: 151 ILPQAIRTILPPMTNQVVNLIKNTSTVAIISGADIMFTAKAWAYETTNYIPAFAGAAFLY 210 Query: 200 LIL 202 I+ Sbjct: 211 FIM 213 >gi|229588842|ref|YP_002870961.1| histidine ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229360708|emb|CAY47566.1| histidine ABC transport system, permease protein [Pseudomonas fluorescens SBW25] Length = 242 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 112/218 (51%), Gaps = 12/218 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L + F LL +T+ ++ +S +S+++G A ++ S ++ + Y + RG Sbjct: 14 LSLKGFGPLLLQGTWMTIKLSVLSLAVSVLLGLLGASAKLS-SLRLLRIPAQLYTTLIRG 72 Query: 68 TPLLVQLFVIFYGLPH--IG---------IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 P LV + +IFY L G I D F A +I+L + AY +E R +I++ Sbjct: 73 VPDLVLMLLIFYSLQTWLTGLTDFMEWEYIEIDPFSAGVITLGFIYGAYFTETFRGAILA 132 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ +A+ A GL R Q R++ PQ + + + + ++ +LK+T++ S I + ++ + Sbjct: 133 VPRGQLEAATAYGLKRGQRFRYVTFPQMMRFALPGIGNNWMVMLKATALVSIIGLADLVK 192 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 AQ +TYQ A +YL++TS + ++E Sbjct: 193 AAQDAGKSTYQLFYFLVLAALIYLLITSASNFVLRRLE 230 >gi|194433179|ref|ZP_03065461.1| arginine ABC transporter, permease protein ArtM [Shigella dysenteriae 1012] gi|194418676|gb|EDX34763.1| arginine ABC transporter, permease protein ArtM [Shigella dysenteriae 1012] gi|332091020|gb|EGI96110.1| arginine transport system permease protein artM [Shigella dysenteriae 155-74] Length = 222 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 121/218 (55%), Gaps = 14/218 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + + P+L+ + +L + S +++LI+ +I + ++ L+ Y+ +F GT Sbjct: 1 MFEYLPELM-KGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLV-RGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPSQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW + A+G+++K T+ I+LP S S+E + + KSTS+A TIT+ E+ + Sbjct: 119 EGQWQSCSALGMSKKDTL-AILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMGYS 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 Q + TY ++++ +YL++ ++ IE Sbjct: 178 QLLYGRTYD-VMVFGAAGIIYLVVNGLLTLMMRLIERK 214 >gi|163735166|ref|ZP_02142602.1| ABC transporter permease protein [Roseobacter litoralis Och 149] gi|161391624|gb|EDQ15957.1| ABC transporter permease protein [Roseobacter litoralis Och 149] Length = 221 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 103/203 (50%), Gaps = 2/203 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+Y W + + + L+ ++ TL I I V L +G + + R + + Sbjct: 1 MEYTWDFGSVWEYREALWVGLINTLRIFVICLVAGLSLGLAMGLAR-YSVRRWLRWPAAC 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 ++ FR TP+LVQ+F ++ P + + +A + +TLN +A+ +EI R I +I Sbjct: 60 FIEFFRNTPVLVQIFWFYFAFPILAPFEISALMAAALGITLNSAAFSAEIFRGGIQTIDP 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A AIG+ ++ + IILPQ + L++ I I K T++AS I ++ A+ Sbjct: 120 GQWEAGRAIGMRYREIMARIILPQAVRRMMPALTNRGIEIFKMTTLASAIAYADVLHQAR 179 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 I S + P+ Y +A + ++ Sbjct: 180 LIASVNFNPIEAYTVVAVAFFVI 202 >gi|307308009|ref|ZP_07587727.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|306901413|gb|EFN32017.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 549 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/154 (37%), Positives = 86/154 (55%), Gaps = 11/154 (7%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI---------IISLTLNFSAYISEI 109 F V RG P+LV V++ GLP G + D+ + I+++ L +SAY++EI Sbjct: 379 EFVVDTIRGIPMLV--IVLYVGLPLSGALKDATQGVLDPPNLMRGIVAMALAYSAYLAEI 436 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 RS I +IP GQ +A+ +IGL R QT R ++LPQ PL +E I+ILK TS+ S + Sbjct: 437 FRSGINAIPIGQIEAARSIGLNRWQTARLVVLPQAFRIIIPPLGNELIAILKDTSLLSIL 496 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +I +I Q + S ++ P Y A Y+ LT Sbjct: 497 SIRDITQRMREFQSASFLPFAPYNSAAIFYIFLT 530 >gi|220923580|ref|YP_002498882.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium nodulans ORS 2060] gi|219948187|gb|ACL58579.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 223 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 109/204 (53%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M YE+ F + +P+L A+ TL ++ ++ I +++ A+ + + I+ Sbjct: 1 MSYEFEFGEVFAYWPELAAGALH-TLVLSSLAMAIGMVVAVLGALAKTS-GPVWLRWIVD 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TP L+Q+FVIF+GLP G+ + A +++L +N AY EIIR+ I SI Sbjct: 59 AYIELIRNTPFLIQIFVIFFGLPSAGLRLEPNSAALLALVVNVGAYGIEIIRAGIDSIDP 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A ++GL Q R+++L I L+S+FI ++ ++SV S I E+ A Sbjct: 119 GQIEAGKSLGLKPLQIFRYVVLKPAIQAIYPALTSQFILLMLNSSVCSAIAASELTAAAG 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I S ++ +Y + +Y L+ Sbjct: 179 DIQSRNFRSFEVYLVVTGIYFALS 202 >gi|16264848|ref|NP_437640.1| putative amino acid uptake ABC transporter permease protein [Sinorhizobium meliloti 1021] gi|15140987|emb|CAC49500.1| putative amino acid uptake ABC transporter permease protein [Sinorhizobium meliloti 1021] Length = 549 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/154 (37%), Positives = 86/154 (55%), Gaps = 11/154 (7%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI---------IISLTLNFSAYISEI 109 F V RG P+LV V++ GLP G + D+ + I+++ L +SAY++EI Sbjct: 379 EFVVDTIRGIPMLV--IVLYVGLPLSGALKDATQGVLDPPNLMRGIVAMALAYSAYLAEI 436 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 RS I +IP GQ +A+ +IGL R QT R ++LPQ PL +E I+ILK TS+ S + Sbjct: 437 FRSGINAIPIGQIEAARSIGLNRWQTARLVVLPQAFRIIIPPLGNELIAILKDTSLLSIL 496 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +I +I Q + S ++ P Y A Y+ LT Sbjct: 497 SIRDITQRMREFQSASFLPFAPYNSAAIFYIFLT 530 >gi|293392788|ref|ZP_06637106.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] gi|291424647|gb|EFE97858.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] Length = 254 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 42/239 (17%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS-DTIISLIMH 59 M + W II + L +T+ I ++ G + + R+ + I I+H Sbjct: 1 MNFRW--EIIQEYAPLFMEGAWMTIKCTLICVLLGTTWGLILGLGRLAQAPHGIWKHILH 58 Query: 60 F--------YVWIFRGTPLLVQLFVIFYGL------PHIGIV-----------------F 88 + Y+ FRGTPL VQ+ V+ + L P G++ + Sbjct: 59 YGVQWPVRIYISAFRGTPLFVQIMVVHFALVPLFINPRDGLLVTSGIMSSDFARALRSDY 118 Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 +F++ ++++TLN AY+SEI R+ I SI +GQ +AS ++G++ +T+R +ILPQ Sbjct: 119 GAFLSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRM 178 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY----QPLIIYCELAFVYLILT 203 PL + I+I+K +S+AS I + ++ A R VS Y +P Y ++ VY ++T Sbjct: 179 LPPLGNNAIAIVKDSSLASAIGLADL-AYAARTVSGAYATYWEP---YLTISLVYWVIT 233 >gi|84385569|ref|ZP_00988600.1| arginine ABC transporter, permease protein [Vibrio splendidus 12B01] gi|84379549|gb|EAP96401.1| arginine ABC transporter, permease protein [Vibrio splendidus 12B01] Length = 222 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 90/163 (55%), Gaps = 10/163 (6%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSI 114 +F GTPLLVQ+F+++YG + +SF+ +++L LN +AY + + R + Sbjct: 55 LFTGTPLLVQIFLVYYGPGQFDWIRESFLWNWLSQPWFCAMLALALNTAAYSTLLFRGAF 114 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IP GQW+A A+G+ + T++ ++LP + + S+E I + K TS+ASTITI ++ Sbjct: 115 NAIPAGQWEACRALGMDKVTTLK-VLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDL 173 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 AQRI TY L ++ YL + +I ++E Sbjct: 174 MGYAQRINGQTYDTLTVFGIAGAFYLAVNGVLTLIFRQVEKKA 216 >gi|15800616|ref|NP_286630.1| arginine transporter permease subunit ArtM [Escherichia coli O157:H7 EDL933] gi|15830198|ref|NP_308971.1| arginine transporter permease subunit ArtM [Escherichia coli O157:H7 str. Sakai] gi|16128829|ref|NP_415382.1| arginine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|24112231|ref|NP_706741.1| arginine transporter permease subunit ArtM [Shigella flexneri 2a str. 301] gi|26246884|ref|NP_752924.1| arginine transporter permease subunit ArtM [Escherichia coli CFT073] gi|30062343|ref|NP_836514.1| arginine transporter permease subunit ArtM [Shigella flexneri 2a str. 2457T] gi|82543349|ref|YP_407296.1| arginine transporter permease subunit ArtM [Shigella boydii Sb227] gi|89107712|ref|AP_001492.1| arginine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|91209895|ref|YP_539881.1| arginine transporter permease subunit ArtM [Escherichia coli UTI89] gi|110641062|ref|YP_668792.1| arginine transporter permease subunit ArtM [Escherichia coli 536] gi|110804858|ref|YP_688378.1| arginine transporter permease subunit ArtM [Shigella flexneri 5 str. 8401] gi|117623041|ref|YP_851954.1| arginine transporter permease subunit ArtM [Escherichia coli APEC O1] gi|157155015|ref|YP_001462059.1| arginine transporter permease subunit ArtM [Escherichia coli E24377A] gi|157160384|ref|YP_001457702.1| arginine transporter permease subunit ArtM [Escherichia coli HS] gi|168750050|ref|ZP_02775072.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC4113] gi|168756660|ref|ZP_02781667.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC4401] gi|168763284|ref|ZP_02788291.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC4501] gi|168767376|ref|ZP_02792383.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC4486] gi|168776407|ref|ZP_02801414.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC4196] gi|168779418|ref|ZP_02804425.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC4076] gi|168787087|ref|ZP_02812094.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC869] gi|168799852|ref|ZP_02824859.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC508] gi|170020736|ref|YP_001725690.1| arginine transporter permease subunit ArtM [Escherichia coli ATCC 8739] gi|170080520|ref|YP_001729840.1| arginine ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|187734247|ref|YP_001880942.1| arginine transporter permease subunit ArtM [Shigella boydii CDC 3083-94] gi|188494552|ref|ZP_03001822.1| arginine ABC transporter, permease protein ArtM [Escherichia coli 53638] gi|191166212|ref|ZP_03028046.1| arginine ABC transporter, permease protein ArtM [Escherichia coli B7A] gi|191172103|ref|ZP_03033647.1| arginine ABC transporter, permease protein ArtM [Escherichia coli F11] gi|193064475|ref|ZP_03045556.1| arginine ABC transporter, permease protein ArtM [Escherichia coli E22] gi|193069388|ref|ZP_03050343.1| arginine ABC transporter, permease protein ArtM [Escherichia coli E110019] gi|194428166|ref|ZP_03060709.1| arginine ABC transporter, permease protein ArtM [Escherichia coli B171] gi|194438469|ref|ZP_03070559.1| arginine ABC transporter, permease protein ArtM [Escherichia coli 101-1] gi|195936910|ref|ZP_03082292.1| arginine transporter permease subunit ArtM [Escherichia coli O157:H7 str. EC4024] gi|208809637|ref|ZP_03251974.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC4206] gi|208816065|ref|ZP_03257244.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC4045] gi|208822686|ref|ZP_03263005.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC4042] gi|209396120|ref|YP_002269534.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC4115] gi|209918110|ref|YP_002292194.1| arginine transporter permease subunit ArtM [Escherichia coli SE11] gi|215485992|ref|YP_002328423.1| arginine transporter permease subunit ArtM [Escherichia coli O127:H6 str. E2348/69] gi|217325635|ref|ZP_03441719.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. TW14588] gi|218553447|ref|YP_002386360.1| arginine transporter permease subunit ArtM [Escherichia coli IAI1] gi|218557765|ref|YP_002390678.1| arginine transporter permease subunit ArtM [Escherichia coli S88] gi|218688643|ref|YP_002396855.1| arginine transporter permease subunit ArtM [Escherichia coli ED1a] gi|218694335|ref|YP_002402002.1| arginine transporter permease subunit ArtM [Escherichia coli 55989] gi|218699237|ref|YP_002406866.1| arginine transporter permease subunit ArtM [Escherichia coli IAI39] gi|227884175|ref|ZP_04001980.1| arginine transporter permease subunit ArtM [Escherichia coli 83972] gi|237707175|ref|ZP_04537656.1| arginine transporter subunit [Escherichia sp. 3_2_53FAA] gi|238900120|ref|YP_002925916.1| arginine transporter subunit [Escherichia coli BW2952] gi|253774109|ref|YP_003036940.1| arginine transporter permease subunit ArtM [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160976|ref|YP_003044084.1| arginine transporter permease ArtM [Escherichia coli B str. REL606] gi|254792060|ref|YP_003076897.1| arginine transporter permease subunit ArtM [Escherichia coli O157:H7 str. TW14359] gi|256021018|ref|ZP_05434883.1| arginine transporter permease subunit ArtM [Shigella sp. D9] gi|256023512|ref|ZP_05437377.1| arginine transporter permease subunit ArtM [Escherichia sp. 4_1_40B] gi|260843112|ref|YP_003220890.1| arginine 3rd transport system permease protein ArtM [Escherichia coli O103:H2 str. 12009] gi|260854153|ref|YP_003228044.1| arginine 3rd transport system permease protein ArtM [Escherichia coli O26:H11 str. 11368] gi|260867034|ref|YP_003233436.1| arginine 3rd transport system permease protein ArtM [Escherichia coli O111:H- str. 11128] gi|261225515|ref|ZP_05939796.1| arginine transporter subunit; membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261258516|ref|ZP_05951049.1| arginine 3rd transport system permease protein ArtM [Escherichia coli O157:H7 str. FRIK966] gi|291281863|ref|YP_003498681.1| Arginine transport system permease protein artM [Escherichia coli O55:H7 str. CB9615] gi|293414142|ref|ZP_06656791.1| artM [Escherichia coli B185] gi|293433159|ref|ZP_06661587.1| artM [Escherichia coli B088] gi|300817039|ref|ZP_07097258.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300824002|ref|ZP_07104124.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|300902394|ref|ZP_07120377.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|300921108|ref|ZP_07137492.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|300924470|ref|ZP_07140440.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|300929329|ref|ZP_07144803.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|300947048|ref|ZP_07161270.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300957065|ref|ZP_07169310.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|300991845|ref|ZP_07179670.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|300993465|ref|ZP_07180407.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|301020605|ref|ZP_07184682.1| ABC transporter, permease protein [Escherichia coli MS 69-1] gi|301027625|ref|ZP_07190946.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|301051211|ref|ZP_07198040.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|301305367|ref|ZP_07211462.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|301646301|ref|ZP_07246191.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|306812690|ref|ZP_07446883.1| arginine transporter permease subunit ArtM [Escherichia coli NC101] gi|307137489|ref|ZP_07496845.1| arginine transporter permease subunit ArtM [Escherichia coli H736] gi|307311751|ref|ZP_07591391.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|309795344|ref|ZP_07689762.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|312969072|ref|ZP_07783279.1| arginine transport system permease protein artM [Escherichia coli 2362-75] gi|312970985|ref|ZP_07785164.1| arginine transport system permease protein artM [Escherichia coli 1827-70] gi|331641382|ref|ZP_08342517.1| arginine transport system permease protein ArtM [Escherichia coli H736] gi|331646129|ref|ZP_08347232.1| arginine transport system permease protein ArtM [Escherichia coli M605] gi|331651879|ref|ZP_08352898.1| arginine transport system permease protein ArtM [Escherichia coli M718] gi|331656934|ref|ZP_08357896.1| arginine transport system permease protein ArtM [Escherichia coli TA206] gi|331662273|ref|ZP_08363196.1| arginine transport system permease protein ArtM [Escherichia coli TA143] gi|331667235|ref|ZP_08368100.1| arginine transport system permease protein ArtM [Escherichia coli TA271] gi|331672400|ref|ZP_08373191.1| arginine transport system permease protein ArtM [Escherichia coli TA280] gi|331676649|ref|ZP_08377345.1| arginine transport system permease protein ArtM [Escherichia coli H591] gi|332282245|ref|ZP_08394658.1| arginine transporter subunit [Shigella sp. D9] gi|83287902|sp|P0AE32|ARTM_ECO57 RecName: Full=Arginine ABC transporter permease protein ArtM gi|83287903|sp|P0AE31|ARTM_ECOL6 RecName: Full=Arginine ABC transporter permease protein ArtM gi|83287904|sp|P0AE30|ARTM_ECOLI RecName: Full=Arginine ABC transporter permease protein ArtM gi|83287905|sp|P0AE33|ARTM_SHIFL RecName: Full=Arginine ABC transporter permease protein ArtM gi|12513882|gb|AAG55240.1|AE005267_5 arginine 3rd transport system permease protein [Escherichia coli O157:H7 str. EDL933] gi|26107284|gb|AAN79467.1|AE016758_71 Arginine transport system permease protein artM [Escherichia coli CFT073] gi|1651394|dbj|BAA35575.1| arginine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|1787086|gb|AAC73948.1| arginine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|13360403|dbj|BAB34367.1| arginine 3rd transport system permease protein [Escherichia coli O157:H7 str. Sakai] gi|24051078|gb|AAN42448.1| arginine 3rd transport system permease protein [Shigella flexneri 2a str. 301] gi|30040588|gb|AAP16320.1| arginine 3rd transport system permease protein [Shigella flexneri 2a str. 2457T] gi|81244760|gb|ABB65468.1| arginine 3rd transport system permease protein [Shigella boydii Sb227] gi|91071469|gb|ABE06350.1| arginine 3rd transport system permease protein [Escherichia coli UTI89] gi|110342654|gb|ABG68891.1| arginine transport system permease protein ArtM [Escherichia coli 536] gi|110614406|gb|ABF03073.1| arginine 3rd transport system permease protein [Shigella flexneri 5 str. 8401] gi|115512165|gb|ABJ00240.1| arginine 3rd transport system permease protein [Escherichia coli APEC O1] gi|157066064|gb|ABV05319.1| arginine ABC transporter, permease protein ArtM [Escherichia coli HS] gi|157077045|gb|ABV16753.1| arginine ABC transporter, permease protein ArtM [Escherichia coli E24377A] gi|169755664|gb|ACA78363.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|169888355|gb|ACB02062.1| arginine transporter subunit; membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|187431239|gb|ACD10513.1| arginine ABC transporter, permease protein ArtM [Shigella boydii CDC 3083-94] gi|187768229|gb|EDU32073.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC4196] gi|188015742|gb|EDU53864.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC4113] gi|188489751|gb|EDU64854.1| arginine ABC transporter, permease protein ArtM [Escherichia coli 53638] gi|189003025|gb|EDU72011.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC4076] gi|189356287|gb|EDU74706.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC4401] gi|189363350|gb|EDU81769.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC4486] gi|189366529|gb|EDU84945.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC4501] gi|189373035|gb|EDU91451.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC869] gi|189377762|gb|EDU96178.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC508] gi|190903821|gb|EDV63536.1| arginine ABC transporter, permease protein ArtM [Escherichia coli B7A] gi|190907630|gb|EDV67225.1| arginine ABC transporter, permease protein ArtM [Escherichia coli F11] gi|192928937|gb|EDV82550.1| arginine ABC transporter, permease protein ArtM [Escherichia coli E22] gi|192957341|gb|EDV87789.1| arginine ABC transporter, permease protein ArtM [Escherichia coli E110019] gi|194413726|gb|EDX30005.1| arginine ABC transporter, permease protein ArtM [Escherichia coli B171] gi|194422693|gb|EDX38690.1| arginine ABC transporter, permease protein ArtM [Escherichia coli 101-1] gi|208729438|gb|EDZ79039.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC4206] gi|208732713|gb|EDZ81401.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC4045] gi|208738171|gb|EDZ85854.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC4042] gi|209157520|gb|ACI34953.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC4115] gi|209775318|gb|ACI85971.1| arginine 3rd transport system permease protein [Escherichia coli] gi|209775320|gb|ACI85972.1| arginine 3rd transport system permease protein [Escherichia coli] gi|209775322|gb|ACI85973.1| arginine 3rd transport system permease protein [Escherichia coli] gi|209775324|gb|ACI85974.1| arginine 3rd transport system permease protein [Escherichia coli] gi|209775326|gb|ACI85975.1| arginine 3rd transport system permease protein [Escherichia coli] gi|209911369|dbj|BAG76443.1| arginine ABC transporter permease component [Escherichia coli SE11] gi|215264064|emb|CAS08406.1| arginine 3rd transport system permease protein ArtM; membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|217321856|gb|EEC30280.1| arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. TW14588] gi|218351067|emb|CAU96771.1| arginine transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|218360215|emb|CAQ97765.1| arginine transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI1] gi|218364534|emb|CAR02216.1| arginine transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|218369223|emb|CAR16978.1| arginine transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI39] gi|218426207|emb|CAR07031.1| arginine transporter subunit ; membrane component of ABC superfamily [Escherichia coli ED1a] gi|222032590|emb|CAP75329.1| Arginine transport system permease protein artM [Escherichia coli LF82] gi|226898385|gb|EEH84644.1| arginine transporter subunit [Escherichia sp. 3_2_53FAA] gi|227838927|gb|EEJ49393.1| arginine transporter permease subunit ArtM [Escherichia coli 83972] gi|238860007|gb|ACR62005.1| arginine transporter subunit [Escherichia coli BW2952] gi|242376677|emb|CAQ31389.1| artM, subunit of arginine ABC transporter [Escherichia coli BL21(DE3)] gi|253325153|gb|ACT29755.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972877|gb|ACT38548.1| arginine transporter subunit [Escherichia coli B str. REL606] gi|253977091|gb|ACT42761.1| arginine transporter subunit [Escherichia coli BL21(DE3)] gi|254591460|gb|ACT70821.1| arginine transporter subunit; membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|257752802|dbj|BAI24304.1| arginine 3rd transport system permease protein ArtM [Escherichia coli O26:H11 str. 11368] gi|257758259|dbj|BAI29756.1| arginine 3rd transport system permease protein ArtM [Escherichia coli O103:H2 str. 12009] gi|257763390|dbj|BAI34885.1| arginine 3rd transport system permease protein ArtM [Escherichia coli O111:H- str. 11128] gi|260449992|gb|ACX40414.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli DH1] gi|281177996|dbj|BAI54326.1| arginine ABC transporter permease component [Escherichia coli SE15] gi|281600184|gb|ADA73168.1| Arginine 3rd transport system permease protein [Shigella flexneri 2002017] gi|284920714|emb|CBG33777.1| arginine ABC transporter, permease protein [Escherichia coli 042] gi|290761736|gb|ADD55697.1| Arginine transport system permease protein artM [Escherichia coli O55:H7 str. CB9615] gi|291323978|gb|EFE63400.1| artM [Escherichia coli B088] gi|291434200|gb|EFF07173.1| artM [Escherichia coli B185] gi|294493629|gb|ADE92385.1| arginine ABC transporter, permease protein ArtM [Escherichia coli IHE3034] gi|299879261|gb|EFI87472.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|300297118|gb|EFJ53503.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|300305455|gb|EFJ59975.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|300316150|gb|EFJ65934.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|300398623|gb|EFJ82161.1| ABC transporter, permease protein [Escherichia coli MS 69-1] gi|300405541|gb|EFJ89079.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|300406579|gb|EFJ90117.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|300411959|gb|EFJ95269.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|300419355|gb|EFK02666.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|300453331|gb|EFK16951.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300462748|gb|EFK26241.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|300523513|gb|EFK44582.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|300530391|gb|EFK51453.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300839385|gb|EFK67145.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|301075458|gb|EFK90264.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|305853453|gb|EFM53892.1| arginine transporter permease subunit ArtM [Escherichia coli NC101] gi|306908306|gb|EFN38805.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|307552704|gb|ADN45479.1| arginine transport system permease protein [Escherichia coli ABU 83972] gi|307627730|gb|ADN72034.1| arginine transporter permease subunit ArtM [Escherichia coli UM146] gi|308120994|gb|EFO58256.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|309701139|emb|CBJ00437.1| arginine ABC transporter, permease protein [Escherichia coli ETEC H10407] gi|310336746|gb|EFQ01913.1| arginine transport system permease protein artM [Escherichia coli 1827-70] gi|312286474|gb|EFR14387.1| arginine transport system permease protein artM [Escherichia coli 2362-75] gi|312945378|gb|ADR26205.1| arginine transporter permease subunit ArtM [Escherichia coli O83:H1 str. NRG 857C] gi|313650232|gb|EFS14644.1| arginine transport system permease protein artM [Shigella flexneri 2a str. 2457T] gi|315060146|gb|ADT74473.1| arginine transporter subunit [Escherichia coli W] gi|315135510|dbj|BAJ42669.1| arginine transport system permease protein artM [Escherichia coli DH1] gi|315257897|gb|EFU37865.1| ABC transporter, permease protein [Escherichia coli MS 85-1] gi|315287307|gb|EFU46718.1| ABC transporter, permease protein [Escherichia coli MS 110-3] gi|315292536|gb|EFU51888.1| ABC transporter, permease protein [Escherichia coli MS 153-1] gi|315299390|gb|EFU58642.1| ABC transporter, permease protein [Escherichia coli MS 16-3] gi|320175301|gb|EFW50407.1| Arginine ABC transporter, permease protein ArtM [Shigella dysenteriae CDC 74-1112] gi|320177805|gb|EFW52791.1| Arginine ABC transporter, permease protein ArtM [Shigella boydii ATCC 9905] gi|320183199|gb|EFW58057.1| Arginine ABC transporter, permease protein ArtM [Shigella flexneri CDC 796-83] gi|320192654|gb|EFW67295.1| Arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. EC1212] gi|320196644|gb|EFW71267.1| Arginine ABC transporter, permease protein ArtM [Escherichia coli WV_060327] gi|320199096|gb|EFW73693.1| Arginine ABC transporter, permease protein ArtM [Escherichia coli EC4100B] gi|320637731|gb|EFX07523.1| arginine transporter permease subunit ArtM [Escherichia coli O157:H7 str. G5101] gi|320642854|gb|EFX12055.1| arginine transporter permease subunit ArtM [Escherichia coli O157:H- str. 493-89] gi|320648311|gb|EFX16966.1| arginine transporter permease subunit ArtM [Escherichia coli O157:H- str. H 2687] gi|320654149|gb|EFX22217.1| arginine transporter permease subunit ArtM [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659773|gb|EFX27329.1| arginine transporter permease subunit ArtM [Escherichia coli O55:H7 str. USDA 5905] gi|320664243|gb|EFX31394.1| arginine transporter permease subunit ArtM [Escherichia coli O157:H7 str. LSU-61] gi|323155765|gb|EFZ41934.1| arginine transport system permease protein artM [Escherichia coli EPECa14] gi|323159683|gb|EFZ45662.1| arginine transport system permease protein artM [Escherichia coli E128010] gi|323172172|gb|EFZ57810.1| arginine transport system permease protein artM [Escherichia coli LT-68] gi|323175517|gb|EFZ61112.1| arginine transport system permease protein artM [Escherichia coli 1180] gi|323185175|gb|EFZ70540.1| arginine transport system permease protein artM [Escherichia coli 1357] gi|323190683|gb|EFZ75952.1| arginine transport system permease protein artM [Escherichia coli RN587/1] gi|323379296|gb|ADX51564.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli KO11] gi|323937968|gb|EGB34230.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli E1520] gi|323942778|gb|EGB38943.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli E482] gi|323947115|gb|EGB43126.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli H120] gi|323953435|gb|EGB49301.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli H252] gi|323958150|gb|EGB53859.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli H263] gi|323962974|gb|EGB58546.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli H489] gi|323969575|gb|EGB64863.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli TA007] gi|324009773|gb|EGB78992.1| ABC transporter, permease protein [Escherichia coli MS 57-2] gi|324013023|gb|EGB82242.1| ABC transporter, permease protein [Escherichia coli MS 60-1] gi|324015941|gb|EGB85160.1| ABC transporter, permease protein [Escherichia coli MS 117-3] gi|324116075|gb|EGC09999.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli E1167] gi|326338245|gb|EGD62074.1| Arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. 1125] gi|326346222|gb|EGD69960.1| Arginine ABC transporter, permease protein ArtM [Escherichia coli O157:H7 str. 1044] gi|331038180|gb|EGI10400.1| arginine transport system permease protein ArtM [Escherichia coli H736] gi|331044881|gb|EGI17008.1| arginine transport system permease protein ArtM [Escherichia coli M605] gi|331050157|gb|EGI22215.1| arginine transport system permease protein ArtM [Escherichia coli M718] gi|331055182|gb|EGI27191.1| arginine transport system permease protein ArtM [Escherichia coli TA206] gi|331060695|gb|EGI32659.1| arginine transport system permease protein ArtM [Escherichia coli TA143] gi|331065591|gb|EGI37484.1| arginine transport system permease protein ArtM [Escherichia coli TA271] gi|331070595|gb|EGI41959.1| arginine transport system permease protein ArtM [Escherichia coli TA280] gi|331075338|gb|EGI46636.1| arginine transport system permease protein ArtM [Escherichia coli H591] gi|332088880|gb|EGI93992.1| arginine transport system permease protein artM [Shigella boydii 5216-82] gi|332097160|gb|EGJ02143.1| arginine transport system permease protein artM [Shigella boydii 3594-74] gi|332104597|gb|EGJ07943.1| arginine transporter subunit [Shigella sp. D9] gi|332342249|gb|AEE55583.1| arginine transport system permease ArtM [Escherichia coli UMNK88] gi|332759772|gb|EGJ90075.1| arginine transport system permease protein artM [Shigella flexneri 4343-70] gi|332760601|gb|EGJ90890.1| arginine transport system permease protein artM [Shigella flexneri 2747-71] gi|332763077|gb|EGJ93322.1| arginine transport system permease protein artM [Shigella flexneri K-671] gi|333006663|gb|EGK26162.1| arginine transport system permease protein artM [Shigella flexneri VA-6] gi|333007003|gb|EGK26498.1| arginine transport system permease protein artM [Shigella flexneri K-218] gi|333008830|gb|EGK28290.1| arginine transport system permease protein artM [Shigella flexneri K-272] gi|333020139|gb|EGK39409.1| arginine transport system permease protein artM [Shigella flexneri K-227] gi|333020969|gb|EGK40227.1| arginine transport system permease protein artM [Shigella flexneri K-304] Length = 222 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 121/218 (55%), Gaps = 14/218 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + + P+L+ + +L + S +++LI+ +I + ++ L+ Y+ +F GT Sbjct: 1 MFEYLPELM-KGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLV-RGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW + A+G+++K T+ I+LP S S+E + + KSTS+A TIT+ E+ + Sbjct: 119 EGQWQSCSALGMSKKDTL-AILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMGYS 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 Q + TY ++++ +YL++ ++ IE Sbjct: 178 QLLYGRTYD-VMVFGAAGIIYLVVNGLLTLMMRLIERK 214 >gi|327192313|gb|EGE59278.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 236 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 104/190 (54%), Gaps = 5/190 (2%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWIFRGTPLLVQ 73 L+ +VTL + + ++L++ F + R+ FF+ + + Y+ FRGT + VQ Sbjct: 27 LILEGALVTLQLTVMGSALALVMAFLAGLGRLSRFFA---VRALATAYIEFFRGTSIFVQ 83 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LF +++ LP G+ A +++L LN AY +E++R ++ ++ + Q +A A+ L+R Sbjct: 84 LFWVYFVLPFAGVTLTPLQAGVLALGLNVGAYGAEVVRGAVKAVGREQSEACVALNLSRY 143 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q +RH+ILPQ + + I +LK T+V S I++ ++ AQ + + T L+ + Sbjct: 144 QRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTDMTFQAQVVRAQTGNTLVPFA 203 Query: 194 ELAFVYLILT 203 + +Y ++ Sbjct: 204 TILILYFLMA 213 >gi|229514203|ref|ZP_04403664.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae TMA 21] gi|229348183|gb|EEO13141.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae TMA 21] Length = 222 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 97/179 (54%), Gaps = 18/179 (10%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI---------IISL 98 +FS +I+L F GTPLLVQ+F+++YG + +S + + +++L Sbjct: 47 WFSRAVITL--------FTGTPLLVQIFLVYYGPGQFEWIRESVLWVWLSQPWFCAMLAL 98 Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158 LN +AY +++ + + +IP GQW A A+G+ + T+R ++LP + + S+E I Sbjct: 99 ALNTAAYSTQLFKGAFNAIPSGQWQACRALGMNKIATLR-VLLPYALRRAVPAYSNEVIL 157 Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + K TS+ASTITI ++ AQRI + TY L ++ YL + +I +IE Sbjct: 158 VFKGTSLASTITIMDLMGYAQRINAQTYDTLTVFGIAGAFYLTVNGILTLIFRQIEKKA 216 >gi|240102153|ref|YP_002958461.1| ABC-type amino acid transport system, permease component [Thermococcus gammatolerans EJ3] gi|239909706|gb|ACS32597.1| ABC-type amino acid transport system, permease component [Thermococcus gammatolerans EJ3] Length = 189 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 90/160 (56%), Gaps = 6/160 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI------GIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 Y+ + RGTP+L+QL++I +GLP + V D VA + + +N +AY +E IR + Sbjct: 17 YIELIRGTPMLLQLYIIGFGLPLVIRDHFPNFVMDPTVAAALGMVINSAAYQAEYIRGAF 76 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 SI GQ +A+ ++G+T+ + IRH+I PQ ++E + +LK +S+A + +PE+ Sbjct: 77 NSIEYGQVEAALSLGMTKWEIIRHVIFPQAFRIMLPSWTNEMVYLLKYSSLAMLLAVPEL 136 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 A S T+ IY +A +YL+ + I K+E Sbjct: 137 MYEASVAASQTFLYAQIYLVVAGIYLVFATLIIGIMRKVE 176 >gi|257056921|ref|YP_003134753.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] gi|256586793|gb|ACU97926.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] Length = 236 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/195 (32%), Positives = 106/195 (54%), Gaps = 7/195 (3%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++VTL V + I+ F +A + + + ++ YV I+RGT +VQLF I++ Sbjct: 15 GLLVTLQATVGGIVFATILSF-VAGLAMLSRFVAVRVVARTYVEIWRGTSEVVQLFWIYF 73 Query: 80 GLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 LP + G A I+ L LNF AY +EI+R ++ ++PK Q + + A+ + Q +R Sbjct: 74 VLPILTGFQLLPLWAGIVVLGLNFGAYGAEIVRGAVQAVPKEQHEGAVALNFSTSQRLRR 133 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 +ILPQ + P ++ FI +LK TS+ + IT+PE+ AQ ++ Y E+A + Sbjct: 134 VILPQALVEMMPPFNNLFIQLLKGTSLLTFITVPEMTHQAQVVLVPAYT-----GEVALI 188 Query: 199 YLILTSFCYIIQIKI 213 + IL F ++ I I Sbjct: 189 FSILLVFYLLVSIVI 203 >gi|299069940|emb|CBJ41224.1| putative amino-acid ABC transporter protein [Ralstonia solanacearum CMR15] Length = 226 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 85/149 (57%), Gaps = 2/149 (1%) Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTP L+ + + +Y +P + G+ A I +L N SAY+ EI+R ++ S+P Q A Sbjct: 66 RGTPALIHMLLAYYVVPPLLGLSISPLAAGIGALACNTSAYLVEILRGALSSVPDAQRAA 125 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ +Q RH++LPQ + PL+SEF +LK++S+ S I +PE+ A+ Sbjct: 126 AQALGMREQQVWRHVLLPQVFYRAIPPLTSEFTILLKTSSLMSIIAVPELATVARNASLQ 185 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKI 213 + PL ++ A VY ++ FC K+ Sbjct: 186 SDLPLQVFAMTAAVYFVIL-FCISAAAKV 213 >gi|227523524|ref|ZP_03953573.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] gi|227089289|gb|EEI24601.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] Length = 219 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 94/168 (55%), Gaps = 1/168 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 V+TL ++ + + S+I+G ++ + +F I+ I YV I R TPLL+QLF ++Y Sbjct: 16 GFVLTLWLSFVGIIGSIIVGLICSLFQ-YFKVPILHQIASVYVEISRNTPLLIQLFFLYY 74 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 P IGI F + + II L +Y++E + KGQ ++ AIGL+R Q +++ Sbjct: 75 AFPVIGIKFGAELCGIIGLIFLGGSYMAEGFTGGFNGVSKGQVESGKAIGLSRWQLAKYV 134 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 + PQ + S +++ I ++K TS+ + I IPE+ TA ++ Y+ Sbjct: 135 VFPQGFSLSVPAMAANIIFLIKETSIFTVIAIPELTNTALDLIGMYYR 182 >gi|167586130|ref|ZP_02378518.1| hypothetical protein BuboB_12374 [Burkholderia ubonensis Bu] Length = 246 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 117/220 (53%), Gaps = 19/220 (8%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ ++VI+L++G V+R + +S I YV IFR PL+VQ F+ Sbjct: 26 LMSGFGVTIKVSLTAWVIALVVGSLFGVLRTV-PNKWLSAIGTVYVSIFRNIPLIVQFFI 84 Query: 77 IFYGLPHI--------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + +P + G F F A I+ L L A + E +RS I ++PKGQ Sbjct: 85 WYLVVPELLPPSIGTWIKQLPPGTQF--FTASIVCLGLFTGARVCEQVRSGINALPKGQR 142 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 143 AAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLV 202 Query: 183 STTYQPL--IIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T Q I LA+V + L ++ ++ +S + + Sbjct: 203 DYTAQTYESFIAVTLAYVVINLVVMAFMRWVEGKSRLPGY 242 >gi|148976102|ref|ZP_01812845.1| arginine transporter permease subunit ArtM [Vibrionales bacterium SWAT-3] gi|145964497|gb|EDK29751.1| arginine transporter permease subunit ArtM [Vibrionales bacterium SWAT-3] Length = 222 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 90/163 (55%), Gaps = 10/163 (6%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSI 114 +F GTPLLVQ+F+++YG + +SF+ +++L LN +AY + + R + Sbjct: 55 LFTGTPLLVQIFLVYYGPGQFDWIRESFMWTWLSQPWFCAMLALALNTAAYSTLLFRGAF 114 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IP GQW+A A+G+ + T++ ++LP + + S+E I + K TS+ASTITI ++ Sbjct: 115 NAIPAGQWEACRALGMDKIATLK-VLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDL 173 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 AQRI TY L ++ YL + +I ++E Sbjct: 174 MGYAQRINGQTYDTLTVFGIAGAFYLAVNGILTLIFRQVEKKA 216 >gi|86147678|ref|ZP_01065986.1| arginine ABC transporter, permease protein [Vibrio sp. MED222] gi|85834459|gb|EAQ52609.1| arginine ABC transporter, permease protein [Vibrio sp. MED222] Length = 222 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 11/207 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +V +L + S ++ I+ + V I +I + + +F GTPLLVQ+F+++Y Sbjct: 12 GLVTSLQLTGASLLVGCILSLLMTVTLIL-RIPVIHWLTRGIITLFTGTPLLVQIFLVYY 70 Query: 80 GLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 G + +SF+ +++L LN +AY + + R + +IP GQW+A A+G+ Sbjct: 71 GPGQFDWIRESFLWTWLSQPWFCAMLALALNTAAYSTLLFRGAFNAIPAGQWEACRALGM 130 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + T++ ++LP + + S+E I + K TS+ASTITI ++ AQRI TY L Sbjct: 131 DKIATLK-VLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYAQRINGQTYDTLT 189 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSV 217 ++ YL + +I ++E Sbjct: 190 VFGIAGAFYLAVNGVLTLIFRQVEKKA 216 >gi|333010070|gb|EGK29505.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella flexneri K-272] gi|333020901|gb|EGK40161.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella flexneri K-227] Length = 246 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/213 (24%), Positives = 119/213 (55%), Gaps = 14/213 (6%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 ++ VT+ ++ +++I+ ++G F ++R + +S + YV +FR PL++Q F Sbjct: 26 WSGFQVTIALSICAWIIAFLVGSFFGILRTV-PNRFLSGLGTLYVELFRNVPLILQFFTW 84 Query: 78 FYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + +P IG+ F + F++ ++ L L +A + E +R++I S+P+GQ +A Sbjct: 85 YLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNA 144 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 145 ALAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDY 204 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ +F ++ +E V Sbjct: 205 SAHAWESFTAITLAYVLINTFIMLVMTLVERKV 237 >gi|307319923|ref|ZP_07599346.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306894463|gb|EFN25226.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] Length = 549 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/154 (37%), Positives = 86/154 (55%), Gaps = 11/154 (7%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI---------IISLTLNFSAYISEI 109 F V RG P+LV V++ GLP G + D+ + I+++ L +SAY++EI Sbjct: 379 EFVVDTIRGIPMLV--IVLYVGLPLSGALKDATQGVLDPPNLMRGIVAMALAYSAYLAEI 436 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 RS I +IP GQ +A+ +IGL R QT R ++LPQ PL +E I+ILK TS+ S + Sbjct: 437 FRSGINAIPIGQIEAARSIGLNRWQTARLVVLPQAFRIIIPPLGNELIAILKDTSLLSIL 496 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +I +I Q + S ++ P Y A Y+ LT Sbjct: 497 SIRDITQRMREFQSASFLPFAPYNSAAIFYIFLT 530 >gi|227508306|ref|ZP_03938355.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227511318|ref|ZP_03941367.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227085471|gb|EEI20783.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227192195|gb|EEI72262.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 219 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 94/168 (55%), Gaps = 1/168 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 V+TL ++ + + S+I+G ++ + +F I+ I YV I R TPLL+QLF ++Y Sbjct: 16 GFVLTLWLSFVGIIGSIIVGLICSLFQ-YFKVPILHQIASVYVEISRNTPLLIQLFFLYY 74 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 P IGI F + + II L +Y++E + KGQ ++ AIGL+R Q +++ Sbjct: 75 AFPVIGIKFGAELCGIIGLIFLGGSYMAEGFTGGFNGVSKGQVESGKAIGLSRWQLAKYV 134 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 + PQ + S +++ I ++K TS+ + I IPE+ TA ++ Y+ Sbjct: 135 VFPQGFSLSVPAMAANIIFLIKETSIFTVIAIPELTNTALDLIGMYYR 182 >gi|313115991|ref|ZP_07801418.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310621755|gb|EFQ05283.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 254 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 20/214 (9%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSD----------TIISLIMHFYVWIFRGTP 69 + TL + I+ + +++G +A++R+ ++I Y I RGTP Sbjct: 44 GVSTTLLVTAIALALGIVLGSVVALVRVAHDQQRPGHKNPVLGFFNIICEIYTTIIRGTP 103 Query: 70 LLVQLF----VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 ++VQL VIF + +V ++L +N AY+SEIIR ++++ GQ +A Sbjct: 104 MMVQLLIMSMVIFANSRNFTMVGA------LALGINSGAYVSEIIRGGLMAVDPGQMEAG 157 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++GL T+ II+PQ I L +EFI +LK TS+ + I E+ AQ I++ T Sbjct: 158 RSLGLNYMTTMVVIIIPQAIRAVLPALGNEFIVLLKDTSLITVIGGKELLYAAQGIMNRT 217 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 Y+ + +A +YL+L + K E + Q Sbjct: 218 YEAMFPLLGVALIYLVLVMLFTRLLAKFERRLAQ 251 >gi|295109170|emb|CBL23123.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ruminococcus obeum A2-162] Length = 261 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/164 (33%), Positives = 93/164 (56%), Gaps = 13/164 (7%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYG------LPHIG----IVFDSFVAIIISLTLNFS 103 +S I YV I R TP+LVQ+F+I+YG LP I F+ F +++L +N Sbjct: 82 LSFIATAYVEILRSTPVLVQIFIIYYGVFGMIDLPSFQMFGFIKFNRFFPGVVALGMNSG 141 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AY+ EIIR+ I SI +GQ +A+ ++GL++ +R+IILPQ + +++EF+ I+K + Sbjct: 142 AYLCEIIRAGIQSIDQGQTEAARSLGLSQTMNLRYIILPQALKNILPAIANEFVVIIKES 201 Query: 164 SVASTITIPEIFQTAQRIVSTTY---QPLIIYCELAFVYLILTS 204 ++ TI + +I + T+ +PL++ + F TS Sbjct: 202 AITYTIGVQDIMSAVNAVKGATFIIIEPLLVATAIYFCLCFPTS 245 >gi|325277398|ref|ZP_08143018.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] gi|324097471|gb|EGB95697.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] Length = 221 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 100/188 (53%), Gaps = 1/188 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 LL + TL + + + + +G AV R + ++ YV + R TP +VQLF Sbjct: 16 LLLKGALFTLQLTAVGTLFGVALGVLGAVARAWRLKPF-DVLFGVYVELIRNTPFIVQLF 74 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 IF+GLP +G+ + A ++++ +N AY +EIIR+ I +IPKGQ +A+ A+ ++R + Sbjct: 75 FIFFGLPALGVRLTEWQAAVLAMVINLGAYSTEIIRAGIQAIPKGQLEAAAALAMSRAEA 134 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 RH++L + LSS+ + ++ ++V S I E+ A I S ++ Y Sbjct: 135 FRHVVLQPALAKVWPALSSQIVIVMLGSAVCSQIATEELSFAANFIQSRNFRAFETYLLT 194 Query: 196 AFVYLILT 203 +YLI+ Sbjct: 195 TGLYLIMA 202 >gi|318608045|emb|CBY29543.1| amino acid ABC transporter, permease protein [Yersinia enterocolitica subsp. palearctica Y11] Length = 245 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 108/203 (53%), Gaps = 29/203 (14%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWI 64 L++ + L+ ++TL I+ + V S ++GF +A R D+ + + F Y + Sbjct: 10 LLVPQYLGWLWHGFLLTLWISACTVVASTLLGFLLAAAR----DSELKGLQWFAIGYSTL 65 Query: 65 FRGTPLLVQLFVIFYGL--------------PH--------IGIVFDSFVAIIISLTLNF 102 FR TPLL+QLF ++ PH +G F+A I LT Sbjct: 66 FRNTPLLIQLFFWYFAASQFLPASWIPWLNTPHEITFFGLTLGWPSFEFLAGFIGLTCYS 125 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +A+I+E +RS I + KGQ A++A+GLT Q +RH++LPQ + + PL ++++I+K+ Sbjct: 126 TAFIAEELRSGISGVAKGQKYAAHALGLTGWQAMRHVVLPQALKIAMPPLLGQYMNIIKN 185 Query: 163 TSVASTITIPEIFQTAQRIVSTT 185 +S+A I + E+ ++++ + T Sbjct: 186 SSLAMAIGVAELSYASRQVETET 208 >gi|218460079|ref|ZP_03500170.1| amino acid ABC transporter permease [Rhizobium etli Kim 5] Length = 202 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 105/191 (54%), Gaps = 5/191 (2%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWIFRGTPLLVQ 73 L+ +VTL + + ++L++ F + R+ FF+ + + Y+ FRGT + VQ Sbjct: 10 LILQGALVTLELTVMGSALALVMAFVAGLGRLSRFFA---VRALATAYIEFFRGTSIFVQ 66 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LF +++ LP G+ A +++L LN AY +E++R ++ ++ + Q +A A+ L+R Sbjct: 67 LFWVYFVLPFAGLTLTPLQAGVLALGLNVGAYGAEVVRGAVKAVGREQSEACIALNLSRY 126 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q +RH+ILPQ + + I +LK T+V S I++ ++ AQ + + T L+ + Sbjct: 127 QRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTDMTFHAQVVRAQTGNTLVPFA 186 Query: 194 ELAFVYLILTS 204 + +Y ++ S Sbjct: 187 AILILYFLMAS 197 >gi|186477320|ref|YP_001858790.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phymatum STM815] gi|184193779|gb|ACC71744.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 246 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 65/199 (32%), Positives = 110/199 (55%), Gaps = 13/199 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + VT+ ++ ++VI+LI+G V+R + ++ I YV IFR PL+VQ F+ Sbjct: 26 LLSGLWVTVTVSLSAWVIALIVGSLFGVLRTV-PNKKLAAIGTVYVAIFRNIPLIVQFFI 84 Query: 77 IFYGLPH-----IGIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + +P IG F F + II L L +A + E +RS I ++P+GQ A Sbjct: 85 WYLVIPELLPVSIGTWFKQLPPGAQFFSSSIICLGLFTAARVCEQVRSGINALPRGQRGA 144 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 145 GLALGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDY 204 Query: 185 TYQPLIIYCELAFVYLILT 203 T Q + + YL++ Sbjct: 205 TAQTYESFIAVTVAYLLIN 223 >gi|303256728|ref|ZP_07342742.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Burkholderiales bacterium 1_1_47] gi|330999370|ref|ZP_08323087.1| ABC transporter, permease protein [Parasutterella excrementihominis YIT 11859] gi|302860219|gb|EFL83296.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Burkholderiales bacterium 1_1_47] gi|329575228|gb|EGG56779.1| ABC transporter, permease protein [Parasutterella excrementihominis YIT 11859] Length = 250 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 66/242 (27%), Positives = 125/242 (51%), Gaps = 30/242 (12%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS-----DTIISLIMHF 60 + +I + +P L A +T+ I I + +I+G + + R+ + I+ + + Sbjct: 6 YEVITEYWPLFLEGA-KMTIQITVICVTLGVILGMALGMARLADARHSPWKQILKYCVRW 64 Query: 61 ----YVWIFRGTPLLVQLFVIFYGL------PHIGIV------------FDSFVAIIISL 98 YV FRGTPL VQ+ ++ + + P G++ + + +A I+++ Sbjct: 65 PVTVYVSFFRGTPLFVQILLMQFAILPFFIHPTEGLLISGDLAREIRSTYGAMLAGIVAI 124 Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158 TLN AY+SE+ R+ I S+ KGQ +A+ ++G+T Q + HIILPQ PL + I+ Sbjct: 125 TLNAGAYLSEVFRAGIQSLDKGQMEAARSVGMTYWQAMFHIILPQAFRRMLPPLGNNAIA 184 Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSV 217 ILK +S+ S I + E+ A+ + T + Y ++ +Y ++T Y+++ K+E + Sbjct: 185 ILKDSSLVSAIGLAELAYAARTVAGATARYWEPYITISLMYWVMTLGLAYLVK-KMEQRL 243 Query: 218 TQ 219 + Sbjct: 244 GK 245 >gi|161870370|ref|YP_001599540.1| amino acid ABC transporter, permease protein [Neisseria meningitidis 053442] gi|161595923|gb|ABX73583.1| amino acid ABC transporter, permease protein [Neisseria meningitidis 053442] Length = 213 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 27/184 (14%) Query: 60 FYVWIFRGTPLLVQLFVI------FYGLPHIGIV------------FDSFVAIIISLTLN 101 YV +FRGTPL VQ+ + F+ P GI+ + +A ++L N Sbjct: 33 LYVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILVSGEAAIALRRGYGPLIAGSLALIAN 92 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 AYI EI R+ I SI KGQ +A+ ++GLT Q +R++ILPQ + PL+SEFI++LK Sbjct: 93 SGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQAMRYVILPQALRRMLPPLASEFITLLK 152 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCE----LAFVYLILTSFCYIIQIKIESSV 217 +S+ S I + E+ Q ++ Y +Y E +A +YL++T+F I +++E Sbjct: 153 DSSLLSVIAVAEL-AYVQNTITGRYS---VYEEPLYTVALIYLLMTTFLGWIFLRLEKRY 208 Query: 218 T-QH 220 QH Sbjct: 209 NPQH 212 >gi|229541937|ref|ZP_04430997.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus coagulans 36D1] gi|229326357|gb|EEN92032.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus coagulans 36D1] Length = 217 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 108/198 (54%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+++ D+ L V T+ I+ I V S I+G IAV R+ +++ I YV + Sbjct: 4 FSILTDNI-DLYMKGFVNTIKISIIGLVASFILGNLIAVFRLA-PVKLLNFIGAVYVEVI 61 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R PL++ F + GL + I F+A I+L++ +A+I+E +R+ I S+ KGQ +A+ Sbjct: 62 RNIPLILTGFFFYNGLSYFHINLSGFIAGTIALSIYTAAFIAEAVRAGIQSVDKGQLEAA 121 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 + GLT Q +R+++LPQ I P+ ++F++++K++S+ ++ A I T Sbjct: 122 RSTGLTYTQAMRYVVLPQAIKIVIPPIGNQFLNLVKNSSILGVFAGLDLMYYADLIHEKT 181 Query: 186 YQPLIIYCELAFVYLILT 203 + Y + YLILT Sbjct: 182 WITFDTYIFVGMFYLILT 199 >gi|304387087|ref|ZP_07369338.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Neisseria meningitidis ATCC 13091] gi|304338836|gb|EFM04939.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Neisseria meningitidis ATCC 13091] Length = 248 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 100/183 (54%), Gaps = 27/183 (14%) Query: 61 YVWIFRGTPLLVQLFVI------FYGLPHIGIV------------FDSFVAIIISLTLNF 102 YV +FRGTPL VQ+ + F+ P GI+ + +A ++L N Sbjct: 69 YVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILVSGEAAIALRRGYGPLIAGSLALIANS 128 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AYI EI R+ I SI KGQ +A+ ++GLT Q +R++ILPQ + PL+SEFI++LK Sbjct: 129 GAYICEIFRAGIQSIDKGQMEAARSLGLTYPQAMRYVILPQALRRMLPPLASEFITLLKD 188 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCE----LAFVYLILTSFCYIIQIKIESSVT 218 +S+ S I + E+ Q ++ Y +Y E +A +YL++T+F I +++E Sbjct: 189 SSLLSVIAVAEL-AYVQNTITGRYS---VYEEPLYTVALIYLLMTTFLGWIFLRLEKRYN 244 Query: 219 -QH 220 QH Sbjct: 245 PQH 247 >gi|262282449|ref|ZP_06060217.1| amino acid permease [Streptococcus sp. 2_1_36FAA] gi|262261740|gb|EEY80438.1| amino acid permease [Streptococcus sp. 2_1_36FAA] Length = 226 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 98/179 (54%), Gaps = 1/179 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 II+ + L A +TL IA + S ++G +++IR + I+ I Y+ + R T Sbjct: 5 IIEQYYPLYQQAFFLTLHIAVWGIIGSFLLGLVVSIIR-HYRVPILRQIATAYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IG+V S I L +Y++E RS + ++ + Q + +I Sbjct: 64 PLLIQLFFLYFGLPRIGLVLSSEACATIGLIFLGGSYMAESFRSGLEAVSQTQHEIGLSI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GLT +Q R+++LPQ + S+ I ++K TSV S + + ++ A+ ++ Y+ Sbjct: 124 GLTPRQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSVVALADLMYVAKDLIGLYYE 182 >gi|190894714|ref|YP_001985007.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700375|gb|ACE94457.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 219 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 104/190 (54%), Gaps = 5/190 (2%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWIFRGTPLLVQ 73 L+ +VTL + + ++L++ F + R+ FF+ + + Y+ FRGT + VQ Sbjct: 10 LILEGALVTLQLTVMGSALALVMAFLAGLGRLSRFFA---VRALATAYIEFFRGTSIFVQ 66 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LF +++ LP G+ A +++L LN AY +E++R ++ ++ + Q +A A+ L+R Sbjct: 67 LFWVYFVLPFAGVTLTPLQAGVLALGLNVGAYGAEVVRGAVKAVGREQSEACVALNLSRY 126 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q +RH+ILPQ + + I +LK T+V S I++ ++ AQ + + T L+ + Sbjct: 127 QRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTDMTFQAQVVRAQTGNTLVPFA 186 Query: 194 ELAFVYLILT 203 + +Y ++ Sbjct: 187 TILILYFLMA 196 >gi|148261727|ref|YP_001235854.1| polar amino acid ABC transporter, inner membrane subunit [Acidiphilium cryptum JF-5] gi|326405221|ref|YP_004285303.1| putative ABC transporter permease [Acidiphilium multivorum AIU301] gi|146403408|gb|ABQ31935.1| amino acid ABC transporter membrane protein, PAAT family [Acidiphilium cryptum JF-5] gi|325052083|dbj|BAJ82421.1| putative ABC transporter permease protein [Acidiphilium multivorum AIU301] Length = 242 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 13/206 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++I P LL + T+ +A ++ +I +++G IA + ++ L YV I R Sbjct: 16 HMIAHVMPTLLRVGLPNTILLAVLASLIGMVVGLAIAT-GLLARPAVVRLACRVYVDILR 74 Query: 67 GTPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 G P ++ +++I GLP G+ D++ +S+ L AY++EI R+ + S+ +GQ + Sbjct: 75 GLPHILTIYLIGQGLPIAGLSLFGNDTYAYAALSIGLIEGAYMAEIFRAGLQSVERGQIE 134 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS----VASTITIPEIFQTAQ 179 A+ +G+TR QT+R IILPQ I PL+ +FI ++K T+ + T + EIF AQ Sbjct: 135 AARTLGMTRWQTMRDIILPQGIRRVLPPLTGQFILVIKGTALVFLLGLTSSQREIFSIAQ 194 Query: 180 R--IVSTTYQPLIIYCELAFVYLILT 203 I + PL +YL LT Sbjct: 195 DSAINNANLSPL---TAAGILYLALT 217 >gi|261366633|ref|ZP_05979516.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Subdoligranulum variabile DSM 15176] gi|282571452|gb|EFB76987.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Subdoligranulum variabile DSM 15176] Length = 274 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 13/176 (7%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDT------------IISLIMHFYVWIFRGTPLL 71 TL +A + +IGF I ++ D I+ ++ YV +FRGTP++ Sbjct: 26 TLLLALVGTFFGCLIGFAIGALQTIPVDKQRDPAWKRALIRILHGVLRCYVELFRGTPMI 85 Query: 72 VQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 VQ I+YGL + GI + A + +++N AY++E +R I+SI GQ + + +IG+ Sbjct: 86 VQAVFIYYGLLQVFGIKMGMWTAGFLIVSINTGAYMAETVRGGIVSIDPGQTEGAMSIGM 145 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 T QT+ H+ILPQ + + + FI +K TSV S I+I ++F + +V Y Sbjct: 146 THWQTMLHVILPQALRNIIPQIGNNFIINIKDTSVLSVISITDLFFVHKSVVGALY 201 >gi|317404139|gb|EFV84587.1| polar amino acid ABC transporter [Achromobacter xylosoxidans C54] Length = 227 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 104/198 (52%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F +++ +P LL VT+ ++ + V+ I+G A+ R + + + YV + Sbjct: 7 FASVLEQWP-LLAQGAWVTVKLSFCATVLGFILGTLCALARNSRLGWLRA-VAGGYVELI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLL+Q + + +GL G+ +++L +N AY EI+R+ I SIPK Q +A Sbjct: 65 RNTPLLIQAYFLIFGLSSAGLTMPIMAGAVLALVINIGAYTCEIVRAGIESIPKDQLEAG 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 + L+R Q H++L + L+S+F+ ++ ++S+ S + E+ A RI S T Sbjct: 125 ECLALSRLQVFWHVVLRPAVERVYPSLTSQFVLLMLASSIMSAVGAEELLGVANRIQSDT 184 Query: 186 YQPLIIYCELAFVYLILT 203 Y+ ++ L VYL L+ Sbjct: 185 YRNFEVFIVLWGVYLALS 202 >gi|238750616|ref|ZP_04612116.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia rohdei ATCC 43380] gi|238711264|gb|EEQ03482.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia rohdei ATCC 43380] Length = 198 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 64/184 (34%), Positives = 97/184 (52%), Gaps = 10/184 (5%) Query: 23 VTLPIACISFVISLIIGFFIAVI----RIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 VTL I+ + V+ I GF + + R F YVW+ RGTP L QL V + Sbjct: 3 VTLVISMSAAVMGAIAGFILQAVCCHNRWLFWP------WRTYVWLIRGTPYLAQLAVFY 56 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 +GLP IG+ + A ++SL + SAY EI R++ SI GQ +A+ ++ + + Sbjct: 57 FGLPAIGLTLSAIEATVLSLAIYSSAYFGEIFRTAWKSIGHGQLEAAQVHDISAWYSFWY 116 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 I PQ S L ++FI +K ++VAS IT+PE+ T +IV+ TY ++ Y L Sbjct: 117 IQTPQAWRFSLPLLGNQFILTIKESAVASIITVPELTMTTGQIVANTYTYIVPYTLLILS 176 Query: 199 YLIL 202 Y +L Sbjct: 177 YWLL 180 >gi|300694623|ref|YP_003750596.1| amino-acid ABC transporter protein [Ralstonia solanacearum PSI07] gi|299076660|emb|CBJ35998.1| putative amino-acid ABC transporter protein [Ralstonia solanacearum PSI07] Length = 230 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 100/187 (53%), Gaps = 2/187 (1%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A V + + +F + L++ + R+ + ++M +V RGTP L+ + + + Sbjct: 24 AGAAVAIGASACAFALGLVLSIVLLWARLSRYRILRGMVMA-WVSAIRGTPALIHMLLAY 82 Query: 79 YGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 Y +P + G+ A I +L N SAY+ EI+R ++ S+P Q A+ A+G+ Q R Sbjct: 83 YVVPPLLGLSISPLAAGIGALACNTSAYLVEILRGALSSVPDTQRAAAQALGMREPQVWR 142 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 H++LPQ + PL+SEF +LK++S+ S I +PE+ A+ + PL ++ A Sbjct: 143 HVLLPQVFYRAIPPLTSEFTILLKASSLMSIIAVPELATVARNASLQSDLPLQVFAMTAA 202 Query: 198 VYLILTS 204 VY ++ S Sbjct: 203 VYFVILS 209 >gi|218709551|ref|YP_002417172.1| arginine transporter permease subunit ArtM [Vibrio splendidus LGP32] gi|218322570|emb|CAV18729.1| ABC transporter: transmembrane protein; Arginine uptake [Vibrio splendidus LGP32] Length = 222 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 90/163 (55%), Gaps = 10/163 (6%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSI 114 +F GTPLLVQ+F+++YG + +SF+ +++L LN +AY + + R + Sbjct: 55 LFTGTPLLVQIFLVYYGPGQFDWIRESFLWTWLSQPWFCAMLALALNTAAYSTLLFRGAF 114 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IP GQW+A A+G+ + T++ ++LP + + S+E I + K TS+ASTITI ++ Sbjct: 115 NAIPAGQWEACRALGMDKIATLK-VLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDL 173 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 AQRI TY L ++ YL + +I ++E Sbjct: 174 MGYAQRINGQTYDTLTVFGIAGAFYLAVNGVLTLIFRQVEKKA 216 >gi|163816015|ref|ZP_02207385.1| hypothetical protein COPEUT_02195 [Coprococcus eutactus ATCC 27759] gi|158448825|gb|EDP25820.1| hypothetical protein COPEUT_02195 [Coprococcus eutactus ATCC 27759] gi|295093671|emb|CBK82762.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Coprococcus sp. ART55/1] Length = 228 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 64/180 (35%), Positives = 94/180 (52%), Gaps = 22/180 (12%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFS 103 +S +M F VWI RGTPL++QL +I+Y P G+VF + FVA +S +N++ Sbjct: 51 LSYLMKFIVWIVRGTPLMIQLLIIYY-FP--GLVFHNPVWGGGEGGRFVAASVSFIVNYA 107 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 Y SEI R I IP GQ +A +G+T KQ + L Q I +S+E I+++K T Sbjct: 108 CYFSEIYRGGIQGIPVGQEEAGLVLGMTPKQIFFKVKLLQMIKKIVPAMSNEIITLVKDT 167 Query: 164 SVASTITIPEI------FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 S+A I + EI F + +S PL +C AF YLI ++ K+E + Sbjct: 168 SLARIIALQEIIWAGQAFMKGSQGISGAIWPL-FFC--AFYYLIWNGVLTVLLGKLEKKL 224 >gi|152971236|ref|YP_001336345.1| histidine and lysine/arginine/ornithine transport system ABC transporter membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895827|ref|YP_002920563.1| histidine transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|150956085|gb|ABR78115.1| histidine and lysine/arginine/ornithine transport system (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548145|dbj|BAH64496.1| histidine transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 228 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 112/225 (49%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F Q++ +VTL +A S V++++IG A ++ S+ ++L+ Y + RG P L Sbjct: 4 GFSQVILQGALVTLELALSSVVLAVLIGLAGAGAKLS-SNRPLALVFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G+ D +A II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNSVTDALGMAQFDIDPMIAGIITLGFIYGAYFTETFRGAYLAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G + QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 HIEAATAFGFSGGQTFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T+QP +YL+ T+ + + +E T D Sbjct: 183 AGKSTWQPFYFAIVCGLIYLVFTTVSNGVLLLLERRYTVGVKRAD 227 >gi|227893085|ref|ZP_04010890.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] gi|227865063|gb|EEJ72484.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] Length = 213 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 99/174 (56%), Gaps = 1/174 (0%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 I+ + SLI+G F A++ + +I Y+ IFR PLLV + + + +P + Sbjct: 25 IALIFSLILGVFFALLEVA-PPKFGRVIAKVYIAIFRNIPLLVIVMIFYLIVPRYIVKLS 83 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 F A I LTL SA+I+E +R+ I SI GQ + + + G+T Q +R++ILPQ + Sbjct: 84 GFQAGTIGLTLYTSAFIAETVRAGINSIGTGQMEGARSNGMTYTQAMRYVILPQAMKIVI 143 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++SV + + ++ AQ I +T+Q + Y + YLILT Sbjct: 144 PPLGNQFVNLVKNSSVLAFVAGFDLMYQAQLIAFSTFQTIDTYIIVGLFYLILT 197 >gi|157362893|ref|YP_001469660.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga lettingae TMO] gi|157313497|gb|ABV32596.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga lettingae TMO] Length = 224 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 109/191 (57%), Gaps = 7/191 (3%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV 92 ++ + GF IA+IR ++ ++S F + I RG+P L+ ++ +++ LP+ GI SF Sbjct: 29 IMGIFFGFIIALIR-YYKIPVLSQFFAFAIEIVRGSPFLLLVYAVYFVLPYFGIELQSFE 87 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 ++ LT+ + Y+SE+ RS +++I KGQ++A+ A+G++ + IILPQ + + + Sbjct: 88 TAVVVLTITSTVYLSEVFRSGLLAIDKGQFEAADALGMSFANKLFLIILPQVLQITLPSI 147 Query: 153 SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY---II 209 + + +K TS+ S I + EI +T+++++ T P + +A + + CY ++ Sbjct: 148 VGQIVLTIKDTSIVSLIGMAEIVRTSRQVMQITLDPFTAFLIVAGYF---AAVCYPLILV 204 Query: 210 QIKIESSVTQH 220 K+E + + Sbjct: 205 SRKLEQRILKG 215 >gi|89902568|ref|YP_525039.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89347305|gb|ABD71508.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 255 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 67/237 (28%), Positives = 119/237 (50%), Gaps = 29/237 (12%) Query: 3 YEWFNL-IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-----TIISL 56 + WF II + L + + +T+ + I V +G I + R+ + + Sbjct: 7 FGWFRADIIAEYAVLFWRGLQMTMLVTLICIVQGTALGLAIGMARLAEARHAPARQLCKF 66 Query: 57 IMHF----YVWIFRGTPLLVQLFVIFYGL------PHIGIV------------FDSFVAI 94 + + YV FRGTPL VQ+ +I + + P G++ + +F++ Sbjct: 67 ALRWPATVYVSFFRGTPLFVQILLIHFAVLPLFINPADGLLISGETARNLKQNYGAFLSG 126 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 +I+LTLN AYISEI R+ I SI +GQ +AS ++GL+ +T+ H++LPQ PL + Sbjct: 127 VIALTLNAGAYISEIFRAGIQSIDRGQVEASRSLGLSFPRTMFHVVLPQAFRRMLPPLGN 186 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQ 210 IS+LK +S+ S I + E+ A+ + + Y ++ +Y +LT Y+++ Sbjct: 187 NAISLLKDSSLISAIGLAELAYAARTVAGAYSRYWEPYLTISLMYWVLTLGLAYVVK 243 >gi|330469203|ref|YP_004406946.1| polar amino acid ABC transporter inner membrane subunit [Verrucosispora maris AB-18-032] gi|328812174|gb|AEB46346.1| polar amino acid abc transporter, inner membrane subunit [Verrucosispora maris AB-18-032] Length = 326 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 65/228 (28%), Positives = 119/228 (52%), Gaps = 37/228 (16%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W +I + F + A + +L + S +I +++G IA++R+ + I+ + Y Sbjct: 50 FNWSFMIDNMFRPPIMAGVRGSLALLVTSMLIGIVLGVVIAIMRLS-GNPILRGVAWAYT 108 Query: 63 WIFRGTPLLVQLFVIF-----------YGLP---HIGIVFD------------------S 90 W FR P LV L ++F +GLP IG +F Sbjct: 109 WFFRAVPRLV-LAILFGNLGLLWSRIEFGLPFDRQIGALFGVQDFQARLFGFSARDLLTG 167 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 FVA +++L L+ +AY++EI+R+ I S+ +GQ +A+ A+G+T+ Q +R I+LPQ + Sbjct: 168 FVAGMLALGLSEAAYMAEIVRAGIQSVDEGQTEAAQALGMTQGQILRRIVLPQAMRVIVP 227 Query: 151 PLSSEFISILKSTSVASTITIP-EIFQTAQRIVSTTYQ--PLIIYCEL 195 P +E I++LK TS+ + + + E+F + + S T+Q P+++ L Sbjct: 228 PTGNETIAMLKDTSLVAFVPVSTELFFQLRAVGSRTFQVFPMLVAATL 275 >gi|260461490|ref|ZP_05809737.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259032560|gb|EEW33824.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 216 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 90/168 (53%), Gaps = 12/168 (7%) Query: 49 FSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISE 108 FSDTI RG P+LV +F ++YGLP IG+ SF A + +LTL +A + E Sbjct: 55 FSDTI------------RGIPILVLMFFVYYGLPAIGLHLPSFWAAVFALTLFKTAQVVE 102 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 +R ++ SIP+GQ +A+ AIGLT +Q + ++I PQ P + +K +++ S Sbjct: 103 YVRGAVGSIPQGQSEAAMAIGLTFRQRLAYVIFPQAFRRFLPPWINGVTDAVKGSALVSL 162 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 + I ++ Q +++ TY+ + +Y A +Y + + ++E Sbjct: 163 LGITDLMQAINQVIGRTYEAMPLYILGALIYFAVNYALSLASRRLERR 210 >gi|91781327|ref|YP_556534.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693987|gb|ABE37184.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia xenovorans LB400] Length = 227 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 47/128 (36%), Positives = 77/128 (60%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y+ RGTP LVQLF++F+ LP IG+ +A ++L LN AY +EI+R ++ + Sbjct: 55 RLYISFMRGTPALVQLFMLFFTLPLIGLGGRPMLAAALTLGLNSGAYTAEILRGNLRVVT 114 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ+DA+ A+G++ + I LPQ + S L +EF +LK+T +AS + + E+ Sbjct: 115 TGQYDAAIALGMSPSRIALRIALPQMLKASLPALINEFTILLKTTPLASVVAVTELTYAG 174 Query: 179 QRIVSTTY 186 Q +++ TY Sbjct: 175 QIVIARTY 182 >gi|332286604|ref|YP_004418515.1| polar amino acid ABC transporter inner membrane subunit [Pusillimonas sp. T7-7] gi|330430557|gb|AEC21891.1| polar amino acid ABC transporter inner membrane subunit [Pusillimonas sp. T7-7] Length = 237 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 15/212 (7%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 V T + ++V++L +G F ++R S T + YV IFR PL+VQ F+ ++ Sbjct: 21 GFVTTFALTVCAWVLALAVGTFFGILRTLPS-TAARAVGTTYVSIFRNIPLIVQFFIWYF 79 Query: 80 GLPHI-----GIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 +P I G + FV + +L + + I E +R+ I ++P+GQ +A A Sbjct: 80 VVPEILPTPVGDWIKNITPNLQFFVVSVFALGIYTGSRICEQLRAGIQALPRGQRNAGLA 139 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G + QT RHIILPQ PL+SEF+ I K+++VASTI + E+ A+++V T Q Sbjct: 140 MGFSLFQTYRHIILPQVFRHILPPLTSEFLIISKNSAVASTIGLLELSGQARQLVDYTAQ 199 Query: 188 PL--IIYCELAFVYLILTSFCYIIQIKIESSV 217 P I LA+V++ ++ I+ SS+ Sbjct: 200 PYESFIIVTLAYVFMNFLILRFMGWIRKRSSL 231 >gi|71737926|ref|YP_274852.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|289627188|ref|ZP_06460142.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648678|ref|ZP_06480021.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|71558479|gb|AAZ37690.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320324043|gb|EFW80126.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320329012|gb|EFW85011.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330868025|gb|EGH02734.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330985343|gb|EGH83446.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] Length = 220 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 110/204 (53%), Gaps = 1/204 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 ++L++ + ++ + ++ +IG ++ + + L + YV + RGTP+ V + Sbjct: 16 EVLWSGFLTSIQCSALAIAAGTLIGMLAGLV-LTYGGFFARLPIRLYVDLIRGTPVFVLV 74 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +FY +P +G +F A I LTL +++SEI+R ++ +IP GQ +A AIGL Q Sbjct: 75 LAVFYMVPALGWQISAFQAGAIGLTLFCGSHVSEIVRGALQAIPAGQLEAGKAIGLRFNQ 134 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 ++R+++LPQ + + I+K++++ S I + E+ + Q++++ T+ L Y Sbjct: 135 SLRYVLLPQAMRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLF 194 Query: 195 LAFVYLILTSFCYIIQIKIESSVT 218 F++ ++ ++ +IE V Sbjct: 195 AGFLFFLINYAIELLGRQIEKRVA 218 >gi|15677362|ref|NP_274517.1| amino acid ABC transporter, permease protein [Neisseria meningitidis MC58] gi|121635180|ref|YP_975425.1| putative binding-protein-dependent transport systems inner membrane protein [Neisseria meningitidis FAM18] gi|218768491|ref|YP_002343003.1| putative binding-protein-dependent transport systems inner membrane protein [Neisseria meningitidis Z2491] gi|254805275|ref|YP_003083496.1| putative amino acid ABC transporter [Neisseria meningitidis alpha14] gi|7226752|gb|AAF41865.1| amino acid ABC transporter, permease protein [Neisseria meningitidis MC58] gi|120866886|emb|CAM10645.1| putative binding-protein-dependent transport systems inner membrane protein [Neisseria meningitidis FAM18] gi|121052499|emb|CAM08838.1| putative binding-protein-dependent transport systems inner membrane protein [Neisseria meningitidis Z2491] gi|254668817|emb|CBA06816.1| putative amino acid ABC transporter [Neisseria meningitidis alpha14] gi|254670681|emb|CBA06791.1| polar amino acid transport system permease protein [Neisseria meningitidis alpha153] gi|254673241|emb|CBA08243.1| polar amino acid transport system permease protein [Neisseria meningitidis alpha275] gi|261392244|emb|CAX49764.1| putative amino acid ABC transporter permease protein [Neisseria meningitidis 8013] gi|308389654|gb|ADO31974.1| amino acid ABC transporter, permease protein [Neisseria meningitidis alpha710] gi|316986034|gb|EFV64971.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Neisseria meningitidis H44/76] gi|319410739|emb|CBY91122.1| putative amino acid ABC transporter permease protein [Neisseria meningitidis WUE 2594] gi|325128575|gb|EGC51447.1| polar amino amino acid ABC transporter [Neisseria meningitidis N1568] gi|325130591|gb|EGC53338.1| polar amino amino acid ABC transporter [Neisseria meningitidis OX99.30304] gi|325132674|gb|EGC55359.1| polar amino amino acid ABC transporter [Neisseria meningitidis M6190] gi|325134674|gb|EGC57314.1| polar amino amino acid ABC transporter [Neisseria meningitidis M13399] gi|325136597|gb|EGC59198.1| polar amino amino acid ABC transporter [Neisseria meningitidis M0579] gi|325138562|gb|EGC61125.1| polar amino amino acid ABC transporter [Neisseria meningitidis ES14902] gi|325140663|gb|EGC63180.1| polar amino amino acid ABC transporter [Neisseria meningitidis CU385] gi|325142710|gb|EGC65090.1| polar amino amino acid ABC transporter [Neisseria meningitidis 961-5945] gi|325144801|gb|EGC67092.1| polar amino amino acid ABC transporter [Neisseria meningitidis M01-240013] gi|325198631|gb|ADY94087.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria meningitidis G2136] gi|325199888|gb|ADY95343.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria meningitidis H44/76] gi|325201799|gb|ADY97253.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria meningitidis M01-240149] gi|325204486|gb|ADY99939.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria meningitidis M01-240355] gi|325205744|gb|ADZ01197.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria meningitidis M04-240196] gi|325208448|gb|ADZ03900.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria meningitidis NZ-05/33] Length = 248 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 100/183 (54%), Gaps = 27/183 (14%) Query: 61 YVWIFRGTPLLVQLFVI------FYGLPHIGIV------------FDSFVAIIISLTLNF 102 YV +FRGTPL VQ+ + F+ P GI+ + +A ++L N Sbjct: 69 YVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILVSGEAAIALRRGYGPLIAGSLALIANS 128 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AYI EI R+ I SI KGQ +A+ ++GLT Q +R++ILPQ + PL+SEFI++LK Sbjct: 129 GAYICEIFRAGIQSIDKGQMEAARSLGLTYPQAMRYVILPQALRRMLPPLASEFITLLKD 188 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCE----LAFVYLILTSFCYIIQIKIESSVT 218 +S+ S I + E+ Q ++ Y +Y E +A +YL++T+F I +++E Sbjct: 189 SSLLSVIAVAEL-AYVQNTITGRYS---VYEEPLYTVALIYLLMTTFLGWIFLRLEKRYN 244 Query: 219 -QH 220 QH Sbjct: 245 PQH 247 >gi|85707348|ref|ZP_01038431.1| putative amino acid ABC transporter permease protein [Roseovarius sp. 217] gi|85668156|gb|EAQ23034.1| putative amino acid ABC transporter permease protein [Roseovarius sp. 217] Length = 241 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/203 (26%), Positives = 116/203 (57%), Gaps = 4/203 (1%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++W ++ PQ+L A+V T+ IA +S + +++ + V+R+ S +++ +V Sbjct: 26 FQW-KQALNRLPQMLDGAMV-TMEIAILSMGLGILLAILLTVMRLSGSRPLMAFATT-WV 82 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R TP L Q+++ +G+ GI F FV+++I +T N + Y++E R ++ +IP Q Sbjct: 83 EIARNTPALFQIYMAHFGVASFGIHFSPFVSLLIGITFNNAGYLTENFRGALKAIPDTQG 142 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI-PEIFQTAQRI 181 A ++GLT+ Q RHII+PQ + S +P++++ + + TS+ T+ + +++ Q + Sbjct: 143 RAGRSLGLTQLQAFRHIIMPQMLRISFLPMTNQMVWAILMTSLGVTVGMNSDLYGVTQDL 202 Query: 182 VSTTYQPLIIYCELAFVYLILTS 204 + T++ ++ ++ ++T Sbjct: 203 NALTFRTFELFALAGVIFYLITK 225 >gi|300173760|ref|YP_003772926.1| glutamine-binding protein/glutamine transport system permease [Leuconostoc gasicomitatum LMG 18811] gi|299888139|emb|CBL92107.1| Glutamine-binding protein / Glutamine transport system permease protein [Leuconostoc gasicomitatum LMG 18811] Length = 482 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 104/180 (57%), Gaps = 2/180 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + ++ +++ + G + ++ + ++I+ + ++IFRG PL+V F I+ GLP Sbjct: 287 TMLLTVLAIILASVWGILLGIMGVS-QNSILRSLSTTIIYIFRGLPLMVLAFFIYIGLPS 345 Query: 84 -IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 IG+ +F A +++L LN AY + +R ++ +GQ +AS ++GL+ +++R +++P Sbjct: 346 VIGMKIPAFTAGLLTLVLNEGAYTAAFVRGGFAAVDRGQMEASRSLGLSYAKSMRKVVVP 405 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + ++FI LK TS+ S I I E+ QT IVS Q ++ +A +YLI+ Sbjct: 406 QGLKIMIPSFINQFIITLKDTSILSAIGILELTQTGSLIVSRNSQGFRVWAIVAVIYLIV 465 >gi|121610276|ref|YP_998083.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121554916|gb|ABM59065.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 223 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 112/204 (54%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y++ F + ++P LL ++TL ++ + V+ LI+ A + + L+++ Sbjct: 1 MNYQFEFGAVFAAWP-LLLKGTLMTLELSLSATVLGLIVAIACAWGKTS-GPLPVRLVVN 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TP LVQLF F+ LP IG+ + A +I++ +N AY +EIIR+ I SIPK Sbjct: 59 AYIELIRNTPFLVQLFFFFFALPAIGLRWSPHTAALIAMVVNLGAYATEIIRAGIESIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A A+ L Q R ++L + LSS+FI ++ ++SV S I+ ++ A Sbjct: 119 GQIEAGLALNLKAHQIFRLVVLKPALRAIFPALSSQFILLMLTSSVVSVISADDLTSVAA 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 + S T++ IY + +YL L Sbjct: 179 NLQSRTFRSFEIYIVVTAIYLSLA 202 >gi|307138973|ref|ZP_07498329.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli H736] gi|331642947|ref|ZP_08344082.1| histidine transport system permease protein HisQ [Escherichia coli H736] gi|331039745|gb|EGI11965.1| histidine transport system permease protein HisQ [Escherichia coli H736] Length = 228 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V+++IIG +A ++ + + LI Y + RG P L Sbjct: 4 GFSGVILQGALVTLELAISSVVLAVIIGLIVAGGKLS-QNRLSGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G TR Q R I+ P + + + + + ILKST++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTRGQVFRRIMFPSMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +T++P +YL+ T+ Sbjct: 183 AGKSTWEPFYFAIVCGVIYLVFTT 206 >gi|146321226|ref|YP_001200937.1| amino acid ABC transporter permease [Streptococcus suis 98HAH33] gi|253752083|ref|YP_003025224.1| amino acid ABC transporter permease [Streptococcus suis SC84] gi|253753908|ref|YP_003027049.1| amino acid ABC transporter permease [Streptococcus suis P1/7] gi|253755217|ref|YP_003028357.1| amino acid ABC transporter permease [Streptococcus suis BM407] gi|145692032|gb|ABP92537.1| amino acid ABC transporter, permease protein [Streptococcus suis 98HAH33] gi|251816372|emb|CAZ52003.1| putative amino acid ABC transporter, permease protein [Streptococcus suis SC84] gi|251817681|emb|CAZ55429.1| putative amino acid ABC transporter, permease protein [Streptococcus suis BM407] gi|251820154|emb|CAR46492.1| putative amino acid ABC transporter, permease protein [Streptococcus suis P1/7] gi|292558666|gb|ADE31667.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus suis GZ1] gi|319758450|gb|ADV70392.1| amino acid ABC transporter, permease protein [Streptococcus suis JS14] Length = 232 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 114/205 (55%), Gaps = 7/205 (3%) Query: 3 YEWFNLI--IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 Y W N + FP + + + TL I+ +F++++ +G + + ++ +I Sbjct: 9 YAWENWVSYFKDFP-IFFQGFLFTLAISVGAFIMAMFLGIVFGSLSSS-KNKVLKIIARV 66 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIG--IVFDS-FVAIIISLTLNFSAYISEIIRSSIISI 117 YV ++ TPLLVQ +++YGLP I ++ S + +I + L AYI+E+IR+ I ++ Sbjct: 67 YVEYYQNTPLLVQFMIVYYGLPLISNYVLMPSIYWTAVICVGLYHGAYIAEVIRAGIEAV 126 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +A+ + G T+ +T+R IILPQ I T PL+++ ++++K+T+ + I+ +I Sbjct: 127 PTGQTEAALSQGFTQSETMRIIILPQAIPTILPPLTNQVVNLIKNTATVAIISGADIMFM 186 Query: 178 AQRIVSTTYQPLIIYCELAFVYLIL 202 + + + + AF+Y I+ Sbjct: 187 TKSWSAMNANYIPAFAGAAFLYFIM 211 >gi|254449783|ref|ZP_05063220.1| ABC transporter, membrane spanning protein [Octadecabacter antarcticus 238] gi|198264189|gb|EDY88459.1| ABC transporter, membrane spanning protein [Octadecabacter antarcticus 238] Length = 201 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 88/143 (61%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +V + R TP LVQ+F +F+ LP++G+ V II+L +N AY EIIR + SIP+G Sbjct: 39 FVEVIRNTPFLVQIFFLFFALPYLGVRLSPTVTAIIALAINGGAYAIEIIRGGVESIPRG 98 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A+GL+R Q R I+L + L+S+FI + ++SV S+I+ E+ AQR Sbjct: 99 QVEAGAALGLSRAQIFRDIVLVPALRAIYPALTSQFILLTLTSSVCSSISASELTHFAQR 158 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I S T++ +Y + +YL+++ Sbjct: 159 IESATFRSFEVYFTITGLYLLIS 181 >gi|167837859|ref|ZP_02464742.1| hypothetical protein Bpse38_15327 [Burkholderia thailandensis MSMB43] Length = 246 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 108/201 (53%), Gaps = 17/201 (8%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ ++VI+L++G V+R S + S I YV IFR PL+VQ F+ Sbjct: 26 LMSGFWVTIKVSLAAWVIALVVGSLFGVLRTMPSKWL-SAIGTVYVSIFRNIPLIVQFFI 84 Query: 77 IFYGLPHI--------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + +P + G F F A I+ L L A + E +RS I ++PKGQ Sbjct: 85 WYLVVPELLPVSIGTWIKQLPPGTQF--FTASIVCLGLFTGARVCEQVRSGINALPKGQR 142 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 143 AAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLV 202 Query: 183 STTYQPLIIYCELAFVYLILT 203 T Q + + Y+++ Sbjct: 203 DYTAQTYESFIAVTLAYVVIN 223 >gi|117164567|emb|CAJ88113.1| putative ABC transporter permease protein [Streptomyces ambofaciens ATCC 23877] Length = 343 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 24/226 (10%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+ VTL + + V+ ++G +A +R+ S ++ + Y+WIFR P++VQL F Sbjct: 82 AVWVTLQLTAYATVLGFLLGTVLAFMRLSRSP-VLQTVAWTYIWIFRSIPMIVQLVFWFN 140 Query: 80 ----------GLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 G+P G VF + A II LTL+ +AY +EI+R +IS+ G Sbjct: 141 LSALYQELGIGVP-FGPVFWSVDSNSLIGTIGAAIIGLTLHQAAYAAEIVRGGVISVDHG 199 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+G+ R + IR I+LPQ + +E I +LK TSV ++I E+F Q Sbjct: 200 QLEAAAALGIPRLRQIRRIVLPQAMRAILPTAGNEIIGLLKGTSVVYVMSIGELFYQVQV 259 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 I + + + Y++LTS + Q +E ++ D+ Sbjct: 260 IYGRNGRVIPLLLVATAWYVVLTSLLSVAQYYVER---RYARGADR 302 >gi|326804127|ref|YP_004321945.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] gi|326650473|gb|AEA00656.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] Length = 495 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 118/205 (57%), Gaps = 8/205 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 Y I VTL I+ ++ + +I+G I ++RI + ++ + YV RGTPL+VQ+ + Sbjct: 294 YDGIKVTLLISVVAILAGIILGLIIVLMRIS-NLPVLPQLASAYVEFVRGTPLMVQVLFV 352 Query: 78 FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 F G+ + + II +++LN +AYISEI R I+S+ +GQ +A+ ++GL T++ Sbjct: 353 FLGVGALFSLSSLLSGII-AVSLNAAAYISEIFRGGILSVDRGQVEAARSLGLNYWTTMK 411 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVSTTYQ---PLIIYC 193 ++ PQ++ L +E +++K +S+ STI + E+ FQT + + S TYQ PL I Sbjct: 412 KVVFPQSLRPVWPSLVNEAATLIKDSSIVSTIGVAELTFQT-RAVTSLTYQGTIPLFISM 470 Query: 194 ELAFVYLILTSFC-YIIQIKIESSV 217 FV +TS + + K+++ V Sbjct: 471 CCYFVLTFVTSMALRLYENKMQAKV 495 >gi|302386734|ref|YP_003822556.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium saccharolyticum WM1] gi|302197362|gb|ADL04933.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium saccharolyticum WM1] Length = 266 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 21/209 (10%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDT--------IISLIMHFYV 62 P L A T+ IA + +I IIGF + +I+ + SD ++ I++ YV Sbjct: 20 PSFLKGA-GKTMAIAIVGTLIGCIIGFAVGIIQTIPVQKSDNPVKRYLLKLVKFILNIYV 78 Query: 63 WIFRGTPLLVQLFVIFYGLP-----HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 +FRGTP++VQ IFYG ++ IVF ++ + ++N AY++E +R I+SI Sbjct: 79 EVFRGTPMMVQAMFIFYGSSVLFGINMSIVFAAYFIV----SINTGAYMAETVRGGILSI 134 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQ + + AIG+T QT+ ++I+PQ + + + I +K T V S I + E+F Sbjct: 135 DPGQTEGAKAIGMTHFQTMVNVIMPQALRNIMPQIGNNLIINIKDTCVLSVIGVVELFYA 194 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFC 206 + + Y + +Y ILT C Sbjct: 195 TKGVAGAYYTYFEAFGITMIIYFILTFTC 223 >gi|160936779|ref|ZP_02084145.1| hypothetical protein CLOBOL_01669 [Clostridium bolteae ATCC BAA-613] gi|158440271|gb|EDP18017.1| hypothetical protein CLOBOL_01669 [Clostridium bolteae ATCC BAA-613] Length = 219 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 104/174 (59%), Gaps = 9/174 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + ++ I ++ + SL +G +A R+ + ++ ++ Y+ I RGTPL++QL V Sbjct: 13 LAGGMGTSIQIFLVTLIFSLPLGLLVAFGRMS-KNRLLQAVVKVYISIMRGTPLMLQLMV 71 Query: 77 IFYGLPH------IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 +++G P+ +G + + A I +N++AY +EI RS I S+P GQ++A+ +G Sbjct: 72 VYFG-PYYLFRIKVGSGYRLW-ATFIGFVINYAAYFAEIYRSGIQSMPVGQYEAAQILGY 129 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +R QT IILPQ I +++E I+++K TS+A T+++ E+F A+ + ++ Sbjct: 130 SRFQTFFKIILPQVIKRILPSVTNEVITLVKDTSLAFTLSVAEMFSIAKALAAS 183 >gi|33592599|ref|NP_880243.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella pertussis Tohama I] gi|33601144|ref|NP_888704.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella bronchiseptica RB50] gi|33572245|emb|CAE41797.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella pertussis Tohama I] gi|33575579|emb|CAE32657.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella bronchiseptica RB50] gi|332382016|gb|AEE66863.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella pertussis CS] Length = 213 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 49/127 (38%), Positives = 77/127 (60%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV +FRGT LVQLF ++ LP G+ + + I+ L N AY +E++R +I+++P G Sbjct: 54 YVEVFRGTSALVQLFWFYFVLPMFGMKLPALLVGIVVLGANAGAYGAEVVRGAILAVPAG 113 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+ LTR +TI IILPQ + P + I +LK+T++ S ITI ++ Q Sbjct: 114 QREAAVALNLTRARTIWRIILPQAVPAMLPPTGNLLIELLKNTALVSLITITDLTFRGQL 173 Query: 181 IVSTTYQ 187 + S T + Sbjct: 174 LRSETLR 180 >gi|25010744|ref|NP_735139.1| hypothetical protein gbs0689 [Streptococcus agalactiae NEM316] gi|77410798|ref|ZP_00787156.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] gi|23095098|emb|CAD46333.1| Unknown [Streptococcus agalactiae NEM316] gi|77163177|gb|EAO74130.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] Length = 231 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 98/174 (56%), Gaps = 8/174 (4%) Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIR 111 LI YV +F+ TPLLVQ+ ++YGL I ++ +F ++ + L AYISE+IR Sbjct: 61 KLISRIYVEVFQNTPLLVQMVFVYYGLAIISNGHVMISAFFTAVLCVGLYHGAYISEVIR 120 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S I ++PKGQ +A+ A G T QT++ IILPQ + T P++++ ++++K+TS + I+ Sbjct: 121 SGIEAVPKGQTEAALAQGFTANQTMQFIILPQAVRTILPPMTNQVVNLIKNTSTVAIISG 180 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ--IKIESSVTQHTYS 223 +I A+ T + + A Y ++ C+ + + + + + TYS Sbjct: 181 ADIMFVAKAWAYDTTNYIPAFAGAAIFYFVI---CFPLASWARKQEELNKKTYS 231 >gi|322833012|ref|YP_004213039.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321168213|gb|ADW73912.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 217 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 79/129 (61%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV + RGTP +VQLFV+F+ LP +G+ +A ++++ LN AY++EI+R + + Sbjct: 56 RLYVSLMRGTPAIVQLFVVFFTLPRLGLGGQPMLAAVLAIGLNSGAYVAEILRVNQSLVT 115 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+ +GL R T ++I PQ I S L +EF +LK+T +AS + + E+ Sbjct: 116 RGQREAARTLGLNRWLTWWYVINPQVIRASLPMLVNEFTILLKTTPLASVVALTELTYAG 175 Query: 179 QRIVSTTYQ 187 Q +++ TY Sbjct: 176 QIVIARTYD 184 >gi|260424825|ref|ZP_05779011.1| glutamine ABC transporter, permease protein [Dialister invisus DSM 15470] gi|260403293|gb|EEW96840.1| glutamine ABC transporter, permease protein [Dialister invisus DSM 15470] Length = 244 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/186 (32%), Positives = 94/186 (50%), Gaps = 6/186 (3%) Query: 7 NLIID-----SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 LI+D + L A TL I +S + G I+VIR ++ L Y Sbjct: 19 ELILDIDFMMKYAPLFAKAAWTTLGIGAAGIFLSFLAGLVISVIRYRKIPFLLPLSTA-Y 77 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V + R TPLLVQLF +++GLP GI LT +Y++E +RS I S+ Q Sbjct: 78 VELSRNTPLLVQLFFLYFGLPKAGIHISGETCAAAGLTFLGGSYMAEALRSGIESVSVSQ 137 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++++ A+GLT Q R ++ PQ T S PL + + ++K TSV S +P++ A+ + Sbjct: 138 YESAAALGLTEHQIFRFVVFPQAFTVSLPPLCANVLFLIKETSVFSVCAVPDLMYIAKDL 197 Query: 182 VSTTYQ 187 + Y+ Sbjct: 198 IGLYYK 203 >gi|218887770|ref|YP_002437091.1| binding-protein-dependent transporters inner membrane component [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758724|gb|ACL09623.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 357 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 79/129 (61%) Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 F++ ++ L L AYI+EI+R+ + + +GQW+AS + GLTR+Q +RH+ILPQ Sbjct: 227 FLSGVVVLGLYEGAYITEIVRAGLEGVERGQWEASASTGLTRRQQLRHVILPQAFRLIVP 286 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 PL+ +FIS +K +++ S I+I E+ +++ TY I+ +A +YL+LT C + Sbjct: 287 PLAGQFISTIKDSAILSVISIRELTFQGMELMAATYLTFEIWLTVAALYLMLTFSCSLAA 346 Query: 211 IKIESSVTQ 219 +E + + Sbjct: 347 RHVERRLRR 355 >gi|238797860|ref|ZP_04641352.1| Binding-protein-dependent transport system inner membrane component [Yersinia mollaretii ATCC 43969] gi|238718276|gb|EEQ10100.1| Binding-protein-dependent transport system inner membrane component [Yersinia mollaretii ATCC 43969] Length = 245 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 23/200 (11%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ + L+ ++TL I+ + V S ++GF +A R + + M + +FR Sbjct: 10 LLAPQYLGWLWDGFLLTLWISACTVVASTLLGFLLAAARDSENRALQWFAMGYST-LFRN 68 Query: 68 TPLLVQLFVIFYGL--------------PH----IGIVFD----SFVAIIISLTLNFSAY 105 TPLL+QLF ++ PH G+ F+A I LTL +A+ Sbjct: 69 TPLLIQLFFWYFAASQFLPASWIPWLNSPHEIRAFGLTLSWPSFEFLAGFIGLTLYSTAF 128 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 I+E +RS I + KGQ A+ A+GLT Q++RH++LPQ + + PL ++++I+K++S+ Sbjct: 129 IAEELRSGISGVAKGQKYAAQALGLTGWQSMRHVVLPQALKIAMPPLLGQYMNIIKNSSL 188 Query: 166 ASTITIPEIFQTAQRIVSTT 185 A I + E+ ++++ + T Sbjct: 189 AMAIGVAELSYASRQVETET 208 >gi|332716672|ref|YP_004444138.1| amino acid ABC transporter, permease protein [Agrobacterium sp. H13-3] gi|325063357|gb|ADY67047.1| amino acid ABC transporter, permease protein [Agrobacterium sp. H13-3] Length = 216 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 99/170 (58%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEI 109 S + L Y+ +RGTP+LVQL ++FY LP +G+ A ++L LN +A+ SEI Sbjct: 43 SGRLPRLASGLYISFWRGTPILVQLLIVFYVLPLLGLDLTPVAAATLALALNTAAFQSEI 102 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R+ + SIPKG+ +A+ +GL+ +T HI +PQ T L E +++K++S+ S I Sbjct: 103 YRAGLQSIPKGEREAAAMLGLSAGRTFLHIEVPQAFRTMLPALVGEIQALVKNSSLVSVI 162 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + ++ + AQ+ +TT++PL Y +Y+ + + I + +E +T+ Sbjct: 163 AVTDLTRRAQQYAATTFRPLDAYLSALLLYVAVGALLAGIGLLVERHLTK 212 >gi|227823732|ref|YP_002827705.1| putative amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Sinorhizobium fredii NGR234] gi|227342734|gb|ACP26952.1| putative amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Sinorhizobium fredii NGR234] Length = 273 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 107/203 (52%), Gaps = 23/203 (11%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI-FYGL 81 VT+ + + F ++ ++G +A++ + + I FY + RG P+LV LF I F G Sbjct: 52 VTVFVTLVGFALATLLGLGVALMALS-EHPALRQIARFYTEVIRGVPILVLLFYIAFVGA 110 Query: 82 PHIGIVFDSFVA---------------------IIISLTLNFSAYISEIIRSSIISIPKG 120 P + + + A II+L + +SA+I+E+ R+ I S+ KG Sbjct: 111 PALVVAVNFLAAPLITWGFMEPLVVRDISLMWRAIIALMIGYSAFIAEVFRAGIQSVDKG 170 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ +GLTR Q R ++ PQ I PL ++F++++K +S+ S + + +I Q + Sbjct: 171 QVEAAKTLGLTRYQRFRLVVFPQAIRVILPPLGNDFVAMVKDSSLVSVLGVADITQMGKV 230 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 S +++ Y +A+VYLILT Sbjct: 231 YASGSFRFFETYSIVAYVYLILT 253 >gi|260599090|ref|YP_003211661.1| hypothetical protein CTU_32980 [Cronobacter turicensis z3032] gi|260218267|emb|CBA33210.1| hypothetical protein CTU_32980 [Cronobacter turicensis z3032] Length = 268 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 40/231 (17%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---------IISLIMH 59 II + L +T+ I ++ + G + + R+ ++ ++ + Sbjct: 22 IIQEYGPLFMQGAWMTIKCTIICVILGTLWGLTLGLGRMAHAEHGPWKYVLRYLVQFPVR 81 Query: 60 FYVWIFRGTPLLVQLFVIFYGL------PHIGIVFDS-----------------FVAIII 96 FYV FRGTPL VQ+ V+ + L P G + +S F++ I+ Sbjct: 82 FYVSAFRGTPLFVQIMVVHFALVPLFINPRDGWLVESGMMSSEFARMLRSDYGAFLSCIV 141 Query: 97 SLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF 156 ++TLN AY+SEI R+ I SI +GQ +AS A+G+ +T+R +ILPQ PL + Sbjct: 142 AITLNAGAYVSEIFRAGIQSIDRGQMEASRALGMPWWKTMRKVILPQAFRRILPPLGNNA 201 Query: 157 ISILKSTSVASTITIPEIFQTAQRIVSTTY----QPLIIYCELAFVYLILT 203 I+I+K +S+AS I + ++ A R VS Y +P Y ++ VY ++T Sbjct: 202 IAIVKDSSLASAIGLADL-AYAARTVSGAYATYWEP---YLTISLVYWVIT 248 >gi|152970013|ref|YP_001335122.1| putative ATP-binding component of a transport system [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|288935767|ref|YP_003439826.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|150954862|gb|ABR76892.1| putative ATP-binding component of a transport system [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|288890476|gb|ADC58794.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] Length = 506 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 118/203 (58%), Gaps = 11/203 (5%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-- 84 ++ +++ S+++GF +A+ + +S Y+W+FR PLLV L + Y +P Sbjct: 27 LSLLTWGCSIVLGFILALAKQS-PRGWLSTPARLYIWLFRSMPLLV-LLIFVYNMPQALP 84 Query: 85 ---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 ++ D F A ++++ L+ +AYI+EI R ++SIP+GQ +A+ A+GL +I+ Sbjct: 85 SFAPVLNDPFWAGLLAMVLSEAAYIAEIHRGGLLSIPRGQSEAARALGLRYAGIQWRVII 144 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL- 200 PQ + + L++E+I+I+K +S+ S I++ EI Q++ S + + +AF Y+ Sbjct: 145 PQALRVALPALANEYIAIVKLSSLVSVISLTEILMVGQQLYSQNFLVMETMTAVAFYYIF 204 Query: 201 ILTSFCYIIQIKIES--SVTQHT 221 I+T F ++++ ++E+ VTQ Sbjct: 205 IVTVFDFLLK-RLENYLDVTQRN 226 >gi|298487228|ref|ZP_07005277.1| Amino acid ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158252|gb|EFH99323.1| Amino acid ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 220 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 52/203 (25%), Positives = 110/203 (54%), Gaps = 1/203 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 ++L++ + ++ + ++ +IG ++ + + L + YV + RGTP+ V + Sbjct: 16 EVLWSGFLTSIQCSALAIAAGTLIGMLAGLV-LTYGGFFARLPIRLYVDLIRGTPVFVLV 74 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +FY +P +G +F A I LTL +++SEI+R ++ +IP GQ +A AIGL Q Sbjct: 75 LAVFYMVPALGWQISAFQAGAIGLTLFCGSHVSEIVRGALQAIPAGQLEAGKAIGLRFNQ 134 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 ++R+++LPQ + + I+K++++ S I + E+ + Q++++ T+ L Y Sbjct: 135 SLRYVLLPQAMRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLF 194 Query: 195 LAFVYLILTSFCYIIQIKIESSV 217 F++ ++ ++ +IE V Sbjct: 195 AGFLFFLINYAIELLGRQIEKRV 217 >gi|121603938|ref|YP_981267.1| polar amino acid ABC transporter inner membrane subunit [Polaromonas naphthalenivorans CJ2] gi|120592907|gb|ABM36346.1| amino acid ABC transporter membrane protein, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 216 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 109/200 (54%), Gaps = 22/200 (11%) Query: 13 FPQLLYAA---IVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTIISLIMHFYV 62 P LL A I+VTL S ++S ++G AV+R+ S II+L+ Sbjct: 12 MPILLQGAWLTILVTLG----SLLLSTVLGLVWAVMRVSGIPLLANLSAAIINLL----- 62 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RG P++V LF +++ +P +GI + A I+ L + +SAY +E R+ I ++ GQ Sbjct: 63 ---RGIPIIVILFFLYFVMPDVGISLSALQAGILGLGIAYSAYQAENFRAGIEAVDHGQV 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A+G+ +R ++LPQ + P + I +LK +S ASTIT+ E+ + I Sbjct: 120 EAARAMGMGWGLMMRRVVLPQAVKIVLPPYGNIMIMMLKDSSQASTITVAELALQGKMIA 179 Query: 183 STTYQPLIIYCELAFVYLIL 202 ++T+Q ++ +A +YL++ Sbjct: 180 TSTFQNATVFTLVALIYLVM 199 >gi|301329183|ref|ZP_07222176.1| putative ATP synthase F0, A subunit [Escherichia coli MS 78-1] gi|300844488|gb|EFK72248.1| putative ATP synthase F0, A subunit [Escherichia coli MS 78-1] Length = 259 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 119/214 (55%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ ++G F ++R + +S + YV +FR PL+VQ F Sbjct: 38 IWSGFQVTIALSICAWIIAFLVGSFFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 96 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F + F++ ++ L L +A + E +R++I S+P+GQ + Sbjct: 97 WYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 156 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 157 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 216 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ +F ++ +E V Sbjct: 217 YSAHAWESFTAITLAYVLINAFIMLVMTLVERKV 250 >gi|238757266|ref|ZP_04618453.1| Glutamine transport system permease protein glnP [Yersinia aldovae ATCC 35236] gi|238704644|gb|EEP97174.1| Glutamine transport system permease protein glnP [Yersinia aldovae ATCC 35236] Length = 218 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 88/141 (62%), Gaps = 1/141 (0%) Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTP++VQ+ I++ LP + + D A I+++ +N AYI+EI R +++SI G Sbjct: 61 LIRGTPIVVQVMFIYFALPMMMPMRIDPLTAAIVTIMINSGAYIAEITRGAVLSIHNGFR 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A A+GL+++ T+R++I P + PL +++I +K TS+ I + E+ + Q I+ Sbjct: 121 EAGLALGLSKRDTLRYVIAPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEII 180 Query: 183 STTYQPLIIYCELAFVYLILT 203 + ++ + I+ +A +YLI+T Sbjct: 181 AGNFRAMEIWSAVAVIYLIIT 201 >gi|229083878|ref|ZP_04216187.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-44] gi|228699456|gb|EEL52132.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-44] Length = 233 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 101/179 (56%), Gaps = 7/179 (3%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIFYGLPHI 84 + ++ + S I+G +AV+RI I + F YV R PL++ FV ++ P I Sbjct: 40 SIVALIGSFILGIIMAVMRI----APIRFMNWFGTAYVEFIRNIPLVLIAFVFYFAFPVI 95 Query: 85 GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQT 144 G+ + FVA +LT+ +A+I+E IR+ I+S+PKGQ +A+ + GLT Q + +++LPQ Sbjct: 96 GVTLNGFVAGTSALTVYTAAFIAEAIRAGIMSVPKGQMEAARSSGLTYVQAMYYVVLPQA 155 Query: 145 ITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I PL ++F++++K++S+ I ++ I + T +Y + YL+LT Sbjct: 156 IKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTRTLVTFDVYIFVGLFYLLLT 214 >gi|300927241|ref|ZP_07142972.1| putative ATP synthase F0, A subunit [Escherichia coli MS 182-1] gi|300951154|ref|ZP_07165018.1| putative ATP synthase F0, A subunit [Escherichia coli MS 116-1] gi|300996683|ref|ZP_07181508.1| putative ATP synthase F0, A subunit [Escherichia coli MS 200-1] gi|300304461|gb|EFJ58981.1| putative ATP synthase F0, A subunit [Escherichia coli MS 200-1] gi|300416791|gb|EFK00102.1| putative ATP synthase F0, A subunit [Escherichia coli MS 182-1] gi|300449583|gb|EFK13203.1| putative ATP synthase F0, A subunit [Escherichia coli MS 116-1] gi|315292093|gb|EFU51445.1| putative ATP synthase F0, A subunit [Escherichia coli MS 153-1] gi|324006309|gb|EGB75528.1| putative ATP synthase F0, A subunit [Escherichia coli MS 57-2] gi|324010471|gb|EGB79690.1| putative ATP synthase F0, A subunit [Escherichia coli MS 60-1] Length = 253 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 119/214 (55%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ ++G F ++R + +S + YV +FR PL+VQ F Sbjct: 32 IWSGFQVTIALSICAWIIAFLVGSFFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 90 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F + F++ ++ L L +A + E +R++I S+P+GQ + Sbjct: 91 WYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 150 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 151 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 210 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ +F ++ +E V Sbjct: 211 YSAHAWESFTAITLAYVLINAFIMLVMTLVERKV 244 >gi|206579195|ref|YP_002238837.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Klebsiella pneumoniae 342] gi|290509794|ref|ZP_06549165.1| amino acid ABC transporter ATP-binding protein [Klebsiella sp. 1_1_55] gi|206568253|gb|ACI10029.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Klebsiella pneumoniae 342] gi|289779188|gb|EFD87185.1| amino acid ABC transporter ATP-binding protein [Klebsiella sp. 1_1_55] Length = 506 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 118/203 (58%), Gaps = 11/203 (5%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-- 84 ++ +++ S+++GF +A+ + +S Y+W+FR PLLV L + Y +P Sbjct: 27 LSLLTWGCSIVLGFILALAKQS-PRGWLSTPARLYIWLFRSMPLLV-LLIFVYNMPQALP 84 Query: 85 ---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 ++ D F A ++++ L+ +AYI+EI R ++SIP+GQ +A+ A+GL +I+ Sbjct: 85 SFAPVLNDPFWAGLLAMVLSEAAYIAEIHRGGLLSIPRGQSEAARALGLRYAGIQWRVII 144 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL- 200 PQ + + L++E+I+I+K +S+ S I++ EI Q++ S + + +AF Y+ Sbjct: 145 PQALRVALPALANEYIAIVKLSSLVSVISLTEILMVGQQLYSQNFLVMETMTAVAFYYIF 204 Query: 201 ILTSFCYIIQIKIES--SVTQHT 221 I+T F ++++ ++E+ VTQ Sbjct: 205 IVTVFDFLLK-RLENYLDVTQRN 226 >gi|209546901|ref|YP_002278819.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538145|gb|ACI58079.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 222 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 102/192 (53%), Gaps = 2/192 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I+ F L + +T+ + I V+ +GF + + R + + + Y+ FRGT Sbjct: 8 ILLRFEHALLLGLWMTIKLTVICIVLGCSLGFLVGLARAS-GNLALRAVSGAYIEFFRGT 66 Query: 69 PLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 P+L+QLF IF+ LP I G+ + + +I+LTL A SE R+S+ SI Q DA A Sbjct: 67 PVLIQLFWIFFCLPLILGVELSNLASGVIALTLYMGAITSETFRASLKSIGLEQLDACVA 126 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL R + +++LPQ + + L S +S+ K +++ S + + ++ Q I + T + Sbjct: 127 LGLPRSAQVINVVLPQAVLRAIPTLLSNCVSLFKESALVSAVGMADLMFVGQNISNNTAR 186 Query: 188 PLIIYCELAFVY 199 P+ + +A +Y Sbjct: 187 PVEVLTVVALIY 198 >gi|241205010|ref|YP_002976106.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858900|gb|ACS56567.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 276 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 119/217 (54%), Gaps = 13/217 (5%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P+ L+ + +TL + IS + I+ +AV R+ + +++ + + Y++ FRGTPLL Q Sbjct: 60 PRYLHG-LWITLSLVFISVICGAILSLPLAVARMS-KNRVLNALAYGYIYFFRGTPLLAQ 117 Query: 74 LFVIFYGL----PH---IGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 LF+++YGL P +GI + +++ + ++T+N +AY +EI+R +I S+ GQ + Sbjct: 118 LFLVYYGLGIFRPQLEAVGIWWFFREAWYCGLFAMTINTAAYQAEILRGAIESVSHGQHE 177 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+G+ + R IILPQ + + P +E I ++K ++V + IT+ ++ + S Sbjct: 178 AAAALGIHKFIAFRKIILPQALIVALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFS 237 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T+ Y A YL + + E +T+H Sbjct: 238 RTFD-YQTYLWAAIFYLTIVEALRHLWAWFERRLTRH 273 >gi|328948880|ref|YP_004366217.1| polar amino acid ABC transporter, inner membrane subunit [Treponema succinifaciens DSM 2489] gi|328449204|gb|AEB14920.1| polar amino acid ABC transporter, inner membrane subunit [Treponema succinifaciens DSM 2489] Length = 220 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 107/201 (53%), Gaps = 6/201 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A ++TL V+S+ +G F AVIR ++ + I+ Y + R TPLL+QLF +++ Sbjct: 16 AAILTLKAGLAGVVLSIALGLFCAVIR-YWKIPVAKEIVKTYTELSRNTPLLIQLFFLYF 74 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 P +GI S II LT +Y++E RSS+ ++ + Q ++ IGLT Q +R + Sbjct: 75 AFPKMGIKLSSEQCGIIGLTFLGGSYMAETFRSSLETVGRVQLESGRCIGLTEFQIVRFV 134 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILPQ + S + + + ++K TS+ S + + ++ A+ ++ Y+ E A Sbjct: 135 ILPQAFSVSIPGICANTMFLIKETSMFSAVALADLMYIAKDLIGLYYKT-----EEALFL 189 Query: 200 LILTSFCYIIQIKIESSVTQH 220 L+++ F ++ I I SS + Sbjct: 190 LVVSYFILLLPITILSSFAER 210 >gi|320547238|ref|ZP_08041531.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] gi|320448126|gb|EFW88876.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] Length = 234 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 99/174 (56%), Gaps = 6/174 (3%) Query: 35 SLIIGFFIAVIRIFFS---DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIVF 88 +LI+ F + VI S + I+ I YV +F+ TPLLVQ ++YGL + I+ Sbjct: 40 ALILAFILGVIFGAMSSSKNKILRAIARVYVEVFQNTPLLVQFVFVYYGLAIMTNGAIMI 99 Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 +F ++ + + AYI+E+IRS I ++PKGQ +A+ + G T QT+ IILPQ + T Sbjct: 100 STFFTAVLCVGIYHGAYIAEVIRSGIEAVPKGQTEAALSQGFTYSQTMSLIILPQAVRTI 159 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 PL+++ ++++K+TS + I+ +I TA+ T + + A +Y I+ Sbjct: 160 LPPLTNQVVNLIKNTSTVAIISGADIMFTAKAWAYETTNYVPAFAGAALLYFIM 213 >gi|332637285|ref|ZP_08416148.1| glutamine ABC transporter, substrate binding and permease protein [Weissella cibaria KACC 11862] Length = 481 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 104/195 (53%), Gaps = 2/195 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I L ++ TL + + +++ + G + V+ + S I L ++IFRG Sbjct: 272 LIKENKAALLDGLIKTLQLTIVGIILAALWGVLLGVMGVAPSKLIRGL-SSVIIYIFRGL 330 Query: 69 PLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 P+LV F I+ G+P++ G +F A +I+L LN AYI +R S+ GQ +A+ + Sbjct: 331 PMLVLAFFIYIGIPNLTGQKIPAFTAGVITLILNEGAYIGAFVRGGFKSVDPGQLEAARS 390 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ + +R +++PQ I + ++FI LK TS+ S I I E+ QT I++ Q Sbjct: 391 LGMPYGKAMRKVVMPQGIRLTIPSFINQFIITLKDTSILSAIGIIELTQTGTLIIARNLQ 450 Query: 188 PLIIYCELAFVYLIL 202 ++ +A +YLI+ Sbjct: 451 GFKVWLMIAVLYLIV 465 >gi|90962415|ref|YP_536331.1| glutamine transport system permease protein [Lactobacillus salivarius UCC118] gi|227891535|ref|ZP_04009340.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] gi|301299246|ref|ZP_07205533.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|90821609|gb|ABE00248.1| Glutamine transport system permease protein [Lactobacillus salivarius UCC118] gi|227866682|gb|EEJ74103.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] gi|300215038|gb|ADJ79454.1| Glutamine transport system permease protein [Lactobacillus salivarius CECT 5713] gi|300853206|gb|EFK80803.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 212 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 62/180 (34%), Positives = 100/180 (55%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + I+ SLIIG A+++ S ++ I + Y+ IFR PLLV V + +P Sbjct: 19 TILCSVIALFFSLIIGSIFAILQTVPSK-LVRTIANIYIEIFRNIPLLVITMVFYVVVPQ 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 I F A I LTL SA+I+E +R+ I ++ GQ + + A GLT QT+R+IILPQ Sbjct: 78 FFIKLSGFTAGTIGLTLYTSAFIAETVRAGIKAVGVGQMEGARANGLTYWQTMRYIILPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++FI+++K++SV + + ++ I S +++ + Y + YLILT Sbjct: 138 AFKLVIPPLGNQFINLIKNSSVLAFVAGFDLMYQGDVIASASFETINTYLVVGVFYLILT 197 >gi|301325869|ref|ZP_07219302.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|300847383|gb|EFK75143.1| ABC transporter, permease protein [Escherichia coli MS 78-1] Length = 222 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 121/218 (55%), Gaps = 14/218 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + + P+L+ + +L + S +++LI+ +I + ++ L+ Y+ +F GT Sbjct: 1 MFEYLPELM-KGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLV-RGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW + A+G+++K T+ I+LP S S+E + + KSTS+A TIT+ E+ + Sbjct: 119 EGQWQSCSALGMSKKDTL-AILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMGYS 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 Q + TY ++++ +YL++ ++ IE Sbjct: 178 QLLYGRTYD-VMVFGASGIIYLVVNGLLTLMMRLIERK 214 >gi|156932773|ref|YP_001436689.1| hypothetical protein ESA_00563 [Cronobacter sakazakii ATCC BAA-894] gi|156531027|gb|ABU75853.1| hypothetical protein ESA_00563 [Cronobacter sakazakii ATCC BAA-894] Length = 256 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 40/231 (17%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---------IISLIMH 59 II + L +T+ I ++ + G + + R+ ++ ++ + Sbjct: 10 IIQEYGPLFMQGAWMTIKCTIICVILGTLWGLTLGLGRMAHAEHGPWKYVLRYLVQFPVR 69 Query: 60 FYVWIFRGTPLLVQLFVIFYGL------PHIGIVFDS-----------------FVAIII 96 FYV FRGTPL VQ+ V+ + L P G + +S F++ I+ Sbjct: 70 FYVSAFRGTPLFVQIMVVHFALVPLFINPRDGWLVESGLMSSEFARMLRSDYGAFLSCIV 129 Query: 97 SLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF 156 ++TLN AY+SEI R+ I SI +GQ +AS A+G+ +T+R +ILPQ PL + Sbjct: 130 AITLNAGAYVSEIFRAGIQSIDRGQMEASRALGMPWWKTMRKVILPQAFRRILPPLGNNA 189 Query: 157 ISILKSTSVASTITIPEIFQTAQRIVSTTY----QPLIIYCELAFVYLILT 203 I+I+K +S+AS I + ++ A R VS Y +P Y ++ VY ++T Sbjct: 190 IAIVKDSSLASAIGLADL-AYAARTVSGAYATYWEP---YLTISLVYWVIT 236 >gi|91209695|ref|YP_539681.1| GltJ subunit of glutamate ABC transporter [Escherichia coli UTI89] gi|91071269|gb|ABE06150.1| GltJ, subunit of glutamate ABC transporter [Escherichia coli UTI89] gi|307627915|gb|ADN72219.1| glutamate and aspartate transporter subunit [Escherichia coli UM146] Length = 246 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 119/214 (55%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ ++G F ++R + +S + YV +FR PL+VQ F Sbjct: 25 IWSGFQVTIALSICAWIIAFLVGSFFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F + F++ ++ L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ +F ++ +E V Sbjct: 204 YSAHAWESFTAITLAYVLINAFIMLVMTLVERKV 237 >gi|332527403|ref|ZP_08403459.1| putative ABC transporter protein glutamate/aspartate transmembrane subunit [Rubrivivax benzoatilyticus JA2] gi|332111812|gb|EGJ11792.1| putative ABC transporter protein glutamate/aspartate transmembrane subunit [Rubrivivax benzoatilyticus JA2] Length = 245 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 106/186 (56%), Gaps = 4/186 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +A TL ++ ++ +++L+ G + ++R D + + + +FR PLLVQ+F+ Sbjct: 34 LMSAWGWTLSVSALALIVALVFGSLMGILRTT-PDRRLVWFGNAWTELFRNIPLLVQIFL 92 Query: 77 IFYGLPHIGI---VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 ++ LP + F SFV ++ +L SA ISE +R+ I S+P+GQ A A+GLT Sbjct: 93 WYHALPALFKPLQAFPSFVLVVFALGFFTSARISEQVRAGIQSLPRGQRYAGLAMGLTLP 152 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 QT R+++LP PL+SE ++I+K++SVA ++I E+ A + T + + +Y Sbjct: 153 QTYRYVLLPMAFRIIVPPLTSEAMNIIKNSSVAFAVSIAELTMFALQAGEETSRNIEMYL 212 Query: 194 ELAFVY 199 + +Y Sbjct: 213 AVTVLY 218 >gi|303328129|ref|ZP_07358568.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio sp. 3_1_syn3] gi|302861955|gb|EFL84890.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio sp. 3_1_syn3] Length = 222 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 105/197 (53%), Gaps = 5/197 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ + + L ++ + +P + FV ++IG +R F + + +Y I RG Sbjct: 11 LLPALNRGLLVSLALIIPAGSLGFVGGVLIG----CMRTF-GPRWLRRLGDWYTAILRGV 65 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PL VQL +I+Y LP +GI F + A + S L +AY SE IR +++SI +GQ A+ A+ Sbjct: 66 PLAVQLMMIYYALPKLGIYFAPYGAALTSFILCTAAYQSEYIRGALLSIRQGQIRAAQAL 125 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G + QT+ I++PQ + +E I ++K +S+A +T E+ + + S T++ Sbjct: 126 GFSTWQTVAWIVVPQAARRALPGCGNEIIYLIKYSSLAYLVTCMELMGEGKVVASDTFRF 185 Query: 189 LIIYCELAFVYLILTSF 205 ++ + YLI+ + Sbjct: 186 TEVFITVGAYYLIMVTL 202 >gi|77408363|ref|ZP_00785104.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] gi|77173044|gb|EAO76172.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] Length = 231 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 98/174 (56%), Gaps = 8/174 (4%) Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIR 111 LI YV +F+ TPLLVQ+ ++YGL I I+ +F ++ + L AYISE+IR Sbjct: 61 KLISRIYVEVFQNTPLLVQMVFVYYGLAIISNGHIMISAFFTAVLCVGLYHGAYISEVIR 120 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S I ++PKGQ +A+ A G T QT++ IILPQ I T P++++ ++++K+TS + I+ Sbjct: 121 SGIEAVPKGQTEAALAQGFTANQTMQLIILPQAIRTILPPMTNQVVNLIKNTSTVAIISG 180 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ--IKIESSVTQHTYS 223 +I A+ T + + A Y ++ C+ + + + + + TYS Sbjct: 181 ADIMFLAKAWAYDTTNYIPAFAGAAIFYFVI---CFPLASWARKQEELNKKTYS 231 >gi|332530243|ref|ZP_08406189.1| amino acid ABC transporter permease [Hylemonella gracilis ATCC 19624] gi|332040229|gb|EGI76609.1| amino acid ABC transporter permease [Hylemonella gracilis ATCC 19624] Length = 216 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 94/161 (58%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 +F+I+ ++G +AV+R+F + ++ YV R P L LF++++GL +G+ Sbjct: 26 AFLIACVLGLALAVLRVFGRHRLPLWLLSIYVEWMRNVPALAHLFLLYFGLAAVGVRLSP 85 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 A + L L +A + ++ + + S+ GQ +A+ A+GL Q +R +++PQ + + Sbjct: 86 LCAAVTGLGLVGAAVLCDVFAAGLRSLHMGQREAALAVGLAPGQVLRFVLVPQMLRVTFP 145 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 L++ + ++K TS+AS I PEI A+ +V++T++ ++I Sbjct: 146 SLTNYAVVLIKDTSIASAIAAPEIMFLARNLVTSTFETVLI 186 >gi|238788678|ref|ZP_04632470.1| Histidine transport system permease protein hisM [Yersinia frederiksenii ATCC 33641] gi|238723273|gb|EEQ14921.1| Histidine transport system permease protein hisM [Yersinia frederiksenii ATCC 33641] Length = 212 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 103/183 (56%), Gaps = 11/183 (6%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV--- 87 S V+ ++ +AV R+ I L + + +IFRGTPL VQL V + G+ + I+ Sbjct: 7 SVVMGGMLAIPLAVARVA-ERRWIRLPVWVFTYIFRGTPLYVQLLVFYSGVYSLEIIRGN 65 Query: 88 --FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 ++F I++LTLN AY +EI +I S+P G+ +A+ A G +R + R II Sbjct: 66 DLLNAFFRSGLNCTILALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSRFKMYRCII 125 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LP + + S+E I +L ST++A T T+P+I + A+ I + TYQP + A +YL Sbjct: 126 LPSALRIALPAYSNEVILMLHSTALAFTATVPDILKIARDINAATYQPFYAFGIAAVLYL 185 Query: 201 ILT 203 I++ Sbjct: 186 IIS 188 >gi|237808336|ref|YP_002892776.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] gi|237500597|gb|ACQ93190.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] Length = 238 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 101/184 (54%), Gaps = 13/184 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+SL+ GF +A+ I + + + FY +IFRGTPL VQL V + G+ + IV D Sbjct: 31 VLSLVFGFMLALPMSIARVSQKKALWMPVWFYTYIFRGTPLYVQLLVFYSGVYTLSIVKD 90 Query: 90 ----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 F +++L LN AY +E++ +I +IP G+ +A+ A G + R I Sbjct: 91 VDFLNLFFRSGFNCTVLALALNTCAYTTEMLAGAIRAIPHGEIEAARAYGFSGFTLYRSI 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I+P + + S+E I +L +TS+A T T+P+I + A+ + + TY+ + A +Y Sbjct: 151 IIPSALRRALPAYSNEVILMLHATSLAFTATVPDILKIARDVNAATYKSFHAFGTAAAIY 210 Query: 200 LILT 203 LI++ Sbjct: 211 LIIS 214 >gi|218887871|ref|YP_002437192.1| polar amino acid ABC transporter inner membrane protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758825|gb|ACL09724.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 596 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 3/209 (1%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + +L +A I+ +S IG + V R S+ + + Y+ + RG PL++ +F ++ Sbjct: 388 GGLAYSLLMAVIAISVSFFIGLAVGVGRSS-SNRVFRIPCLLYIELIRGNPLIIVIFWVY 446 Query: 79 YGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 + +P G + F + +LT AYI+EI+R+ I +IP GQ +A+Y+ GLT Q +R Sbjct: 447 FFIPVMFGTTLNVFWSATWALTAFTGAYIAEIVRTGIQNIPAGQVEAAYSTGLTYLQAMR 506 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY-QPLIIYCELA 196 I+LPQ + + +FI+I K TS+A + + E+ AQ I + P+ IY +A Sbjct: 507 RIVLPQALKQMIPAIVGQFIAIFKDTSLAFVLGVLELTFVAQGINNRLMIHPMEIYGTVA 566 Query: 197 FVYLILTSFCYIIQIKIESSVTQHTYSVD 225 F+Y I + ++E ++ S+ Sbjct: 567 FLYFICCYSMSVFAARLERRLSPEKVSLR 595 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 80/133 (60%), Gaps = 11/133 (8%) Query: 65 FRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 FR TPLL+QLF ++ P I I F+ + A I L++ +++++E+IR+ + Sbjct: 104 FRNTPLLIQLFFWYFAFPAILPDNAREALFSIQFEFWCATI-GLSIYTASFMAEVIRAGL 162 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 SIPKG +A+Y+ GL+ Q +R IILP PL SEF++ +K++S+A + + E+ Sbjct: 163 QSIPKGLLEAAYSSGLSYFQVLRTIILPLAFRAIIPPLGSEFLNNMKNSSLAMVVGVAEL 222 Query: 175 FQTAQRIVSTTYQ 187 AQ++ S T++ Sbjct: 223 TWHAQQVESLTFK 235 >gi|333001453|gb|EGK21021.1| histidine transport system permease protein hisQ [Shigella flexneri VA-6] Length = 228 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V+++IIG A ++ + ++ LI Y + RG P L Sbjct: 4 GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLS-QNRLLGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNMVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G TR Q R I+ P + + + + + ILKST++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +T++P +YL+ T+ Sbjct: 183 AGKSTWEPFYFAIVCGVIYLVFTT 206 >gi|212704551|ref|ZP_03312679.1| hypothetical protein DESPIG_02611 [Desulfovibrio piger ATCC 29098] gi|212671950|gb|EEB32433.1| hypothetical protein DESPIG_02611 [Desulfovibrio piger ATCC 29098] Length = 275 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 59/219 (26%), Positives = 112/219 (51%), Gaps = 2/219 (0%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + I+D+FP + +VT+ ++ + L++G +AV++++ + + ++ YVW FR Sbjct: 43 DTIVDAFP-FIMGGTLVTVGSVALALGMGLVLGVPMAVLQVY-GNALARRLVGLYVWFFR 100 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G P+LV LF+ +G + + F+ + + +AY S+I R +I S+P+GQ A+ Sbjct: 101 GVPILVLLFLSQGLFLSMGWILEPFLLSCLVMGCISTAYQSQIFRGAIESLPQGQLKAAR 160 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G+ I IILPQ + S ++EF +LK ++V + EI + T+ Sbjct: 161 ALGMRDMTAITCIILPQALRLSIPGWANEFSILLKDSAVCYLLGTMEIMARVNAVAQRTH 220 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + L + +Y +LT + ++E+ V YS Sbjct: 221 EHLAFFALAGVIYFVLTLIVLKLLRRLENKVQIPGYSAG 259 >gi|16128637|ref|NP_415187.1| glutamate and aspartate transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|26246628|ref|NP_752668.1| glutamate/aspartate transport system permease gltJ [Escherichia coli CFT073] gi|89107523|ref|AP_001303.1| glutamate and aspartate transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|110640876|ref|YP_668604.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli 536] gi|117622863|ref|YP_851776.1| glutamate and aspartate transporter subunit [Escherichia coli APEC O1] gi|157155111|ref|YP_001461824.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli E24377A] gi|157160142|ref|YP_001457460.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli HS] gi|170020989|ref|YP_001725943.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|170080233|ref|YP_001729553.1| glutamate/aspartate ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170080334|ref|YP_001729654.1| glutamate/aspartate ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|188496270|ref|ZP_03003540.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli 53638] gi|191168688|ref|ZP_03030468.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli B7A] gi|191173965|ref|ZP_03035483.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli F11] gi|194439894|ref|ZP_03071957.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli 101-1] gi|209917915|ref|YP_002291999.1| glutamate/aspartate ABC transporter permease [Escherichia coli SE11] gi|218549770|ref|YP_002383561.1| glutamate and aspartate ABC transporter membrane protein [Escherichia fergusonii ATCC 35469] gi|218557585|ref|YP_002390498.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|218688470|ref|YP_002396682.1| glutamate and aspartate ABC transporter membrane protein [Escherichia coli ED1a] gi|218703988|ref|YP_002411507.1| glutamate and aspartate ABC transporter membrane protein [Escherichia coli UMN026] gi|227884373|ref|ZP_04002178.1| GltJ subunit of glutamate ABC superfamily ATP binding cassette transporter [Escherichia coli 83972] gi|237707379|ref|ZP_04537860.1| glutamate/aspartate transporter gltJ [Escherichia sp. 3_2_53FAA] gi|238899931|ref|YP_002925727.1| glutamate and aspartate transporter subunit [Escherichia coli BW2952] gi|253774362|ref|YP_003037193.1| polar amino acid ABC transporter inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160733|ref|YP_003043841.1| glutamate and aspartate transporter subunit [Escherichia coli B str. REL606] gi|256023734|ref|ZP_05437599.1| glutamate and aspartate transporter subunit [Escherichia sp. 4_1_40B] gi|293403916|ref|ZP_06647910.1| glutamate Aspartate transport system permease gltJ [Escherichia coli FVEC1412] gi|293408780|ref|ZP_06652619.1| glutamate/aspartate transport system permease gltJ [Escherichia coli B354] gi|298379691|ref|ZP_06989296.1| glutamate/aspartate transport system permease gltJ [Escherichia coli FVEC1302] gi|300907832|ref|ZP_07125448.1| putative ATP synthase F0, A subunit [Escherichia coli MS 84-1] gi|300920530|ref|ZP_07136956.1| putative ATP synthase F0, A subunit [Escherichia coli MS 115-1] gi|300931589|ref|ZP_07146901.1| putative ATP synthase F0, A subunit [Escherichia coli MS 187-1] gi|300989987|ref|ZP_07179063.1| putative ATP synthase F0, A subunit [Escherichia coli MS 45-1] gi|301025219|ref|ZP_07188788.1| putative ATP synthase F0, A subunit [Escherichia coli MS 69-1] gi|301028863|ref|ZP_07192038.1| putative ATP synthase F0, A subunit [Escherichia coli MS 196-1] gi|301049844|ref|ZP_07196783.1| putative ATP synthase F0, A subunit [Escherichia coli MS 185-1] gi|301302136|ref|ZP_07208269.1| putative ATP synthase F0, A subunit [Escherichia coli MS 124-1] gi|301643930|ref|ZP_07243957.1| putative ATP synthase F0, A subunit [Escherichia coli MS 146-1] gi|306812921|ref|ZP_07447114.1| glutamate and aspartate transporter subunit [Escherichia coli NC101] gi|307137271|ref|ZP_07496627.1| glutamate and aspartate transporter subunit [Escherichia coli H736] gi|312970729|ref|ZP_07784910.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli 1827-70] gi|331641158|ref|ZP_08342293.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli H736] gi|331645811|ref|ZP_08346914.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli M605] gi|331651667|ref|ZP_08352686.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli M718] gi|331656674|ref|ZP_08357636.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli TA206] gi|331662020|ref|ZP_08362943.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli TA143] gi|331672186|ref|ZP_08372978.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli TA280] gi|331682071|ref|ZP_08382695.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli H299] gi|84028709|sp|P0AER4|GLTJ_ECOL6 RecName: Full=Glutamate/aspartate transport system permease protein gltJ gi|84028710|sp|P0AER3|GLTJ_ECOLI RecName: Full=Glutamate/aspartate transport system permease protein gltJ gi|26107027|gb|AAN79211.1|AE016757_115 Glutamate/aspartate transport system permease protein gltJ [Escherichia coli CFT073] gi|624630|gb|AAA60980.1| GltJ [Escherichia coli] gi|1651273|dbj|BAA35306.1| glutamate and aspartate transporter subunit [Escherichia coli str. K12 substr. W3110] gi|1778572|gb|AAB40855.1| glutamate/aspartate transport system permease protein [Escherichia coli] gi|1786874|gb|AAC73755.1| glutamate and aspartate transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|110342468|gb|ABG68705.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli 536] gi|115511987|gb|ABJ00062.1| glutamate and aspartate transporter subunit [Escherichia coli APEC O1] gi|157065822|gb|ABV05077.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli HS] gi|157077141|gb|ABV16849.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli E24377A] gi|169755917|gb|ACA78616.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|169888068|gb|ACB01775.1| glutamate and aspartate transporter subunit; membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|169888169|gb|ACB01876.1| glutamate and aspartate transporter subunit; membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|188491469|gb|EDU66572.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli 53638] gi|190901280|gb|EDV61049.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli B7A] gi|190905741|gb|EDV65362.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli F11] gi|194421188|gb|EDX37212.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli 101-1] gi|209911174|dbj|BAG76248.1| glutamate/aspartate ABC transporter permease component [Escherichia coli SE11] gi|218357311|emb|CAQ89946.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|218364354|emb|CAR02029.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|218426034|emb|CAR06851.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli ED1a] gi|218431085|emb|CAR11961.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli UMN026] gi|222032407|emb|CAP75146.1| glutamate/aspartate transport system permease protein [Escherichia coli LF82] gi|226898589|gb|EEH84848.1| glutamate/aspartate transporter gltJ [Escherichia sp. 3_2_53FAA] gi|227838459|gb|EEJ48925.1| GltJ subunit of glutamate ABC superfamily ATP binding cassette transporter [Escherichia coli 83972] gi|238861327|gb|ACR63325.1| glutamate and aspartate transporter subunit [Escherichia coli BW2952] gi|242376427|emb|CAQ31129.1| gltJ, subunit of GltIJKL glutamate ABC transporter [Escherichia coli BL21(DE3)] gi|253325406|gb|ACT30008.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972634|gb|ACT38305.1| glutamate and aspartate transporter subunit [Escherichia coli B str. REL606] gi|253976828|gb|ACT42498.1| glutamate and aspartate transporter subunit [Escherichia coli BL21(DE3)] gi|260450179|gb|ACX40601.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli DH1] gi|281177802|dbj|BAI54132.1| glutamate/aspartate ABC transporter permease component [Escherichia coli SE15] gi|284920454|emb|CBG33515.1| glutamate/aspartate ABC transporter, permease protein [Escherichia coli 042] gi|291428502|gb|EFF01527.1| glutamate Aspartate transport system permease gltJ [Escherichia coli FVEC1412] gi|291471958|gb|EFF14441.1| glutamate/aspartate transport system permease gltJ [Escherichia coli B354] gi|294491275|gb|ADE90031.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli IHE3034] gi|298279389|gb|EFI20897.1| glutamate/aspartate transport system permease gltJ [Escherichia coli FVEC1302] gi|299878151|gb|EFI86362.1| putative ATP synthase F0, A subunit [Escherichia coli MS 196-1] gi|300298396|gb|EFJ54781.1| putative ATP synthase F0, A subunit [Escherichia coli MS 185-1] gi|300396148|gb|EFJ79686.1| putative ATP synthase F0, A subunit [Escherichia coli MS 69-1] gi|300400464|gb|EFJ84002.1| putative ATP synthase F0, A subunit [Escherichia coli MS 84-1] gi|300407262|gb|EFJ90800.1| putative ATP synthase F0, A subunit [Escherichia coli MS 45-1] gi|300412469|gb|EFJ95779.1| putative ATP synthase F0, A subunit [Escherichia coli MS 115-1] gi|300460613|gb|EFK24106.1| putative ATP synthase F0, A subunit [Escherichia coli MS 187-1] gi|300842688|gb|EFK70448.1| putative ATP synthase F0, A subunit [Escherichia coli MS 124-1] gi|301077700|gb|EFK92506.1| putative ATP synthase F0, A subunit [Escherichia coli MS 146-1] gi|305853684|gb|EFM54123.1| glutamate and aspartate transporter subunit [Escherichia coli NC101] gi|307552517|gb|ADN45292.1| glutamate/aspartate transport system permease [Escherichia coli ABU 83972] gi|309700893|emb|CBJ00190.1| glutamate/aspartate ABC transporter, permease protein [Escherichia coli ETEC H10407] gi|310337378|gb|EFQ02516.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli 1827-70] gi|312945194|gb|ADR26021.1| glutamate and aspartate transporter subunit [Escherichia coli O83:H1 str. NRG 857C] gi|315135320|dbj|BAJ42479.1| glutamate Aspartate transport system permease [Escherichia coli DH1] gi|315255040|gb|EFU35008.1| putative ATP synthase F0, A subunit [Escherichia coli MS 85-1] gi|315616424|gb|EFU97041.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli 3431] gi|320194171|gb|EFW68803.1| Glutamate Aspartate transport system permease protein GltJ [Escherichia coli WV_060327] gi|323191286|gb|EFZ76550.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli RN587/1] gi|323938416|gb|EGB34670.1| inner membrane transport system [Escherichia coli E1520] gi|323943069|gb|EGB39228.1| inner membrane transport system [Escherichia coli E482] gi|323952775|gb|EGB48643.1| inner membrane transport system [Escherichia coli H252] gi|323963222|gb|EGB58790.1| inner membrane transport system [Escherichia coli H489] gi|323967601|gb|EGB63017.1| inner membrane transport system [Escherichia coli M863] gi|323972109|gb|EGB67323.1| inner membrane transport system [Escherichia coli TA007] gi|323976363|gb|EGB71453.1| inner membrane transport system [Escherichia coli TW10509] gi|324114775|gb|EGC08743.1| inner membrane transport system [Escherichia fergusonii B253] gi|325498167|gb|EGC96026.1| glutamate and aspartate transporter subunit [Escherichia fergusonii ECD227] gi|327254339|gb|EGE65961.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli STEC_7v] gi|331037956|gb|EGI10176.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli H736] gi|331044563|gb|EGI16690.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli M605] gi|331049945|gb|EGI22003.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli M718] gi|331054922|gb|EGI26931.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli TA206] gi|331060442|gb|EGI32406.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli TA143] gi|331070653|gb|EGI42016.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli TA280] gi|331080750|gb|EGI51924.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli H299] Length = 246 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 119/214 (55%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ ++G F ++R + +S + YV +FR PL+VQ F Sbjct: 25 IWSGFQVTIALSICAWIIAFLVGSFFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F + F++ ++ L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ +F ++ +E V Sbjct: 204 YSAHAWESFTAITLAYVLINAFIMLVMTLVERKV 237 >gi|315299179|gb|EFU58433.1| putative ATP synthase F0, A subunit [Escherichia coli MS 16-3] Length = 256 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 119/214 (55%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ ++G F ++R + +S + YV +FR PL+VQ F Sbjct: 35 IWSGFQVTIALSICAWIIAFLVGSFFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 93 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F + F++ ++ L L +A + E +R++I S+P+GQ + Sbjct: 94 WYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 153 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 154 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 213 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ +F ++ +E V Sbjct: 214 YSAHAWESFTAITLAYVLINAFIMLVMTLVERKV 247 >gi|169837461|ref|ZP_02870649.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [candidate division TM7 single-cell isolate TM7a] Length = 417 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 64/229 (27%), Positives = 114/229 (49%), Gaps = 14/229 (6%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD----------- 51 + W I + + VVTL I+ ++ IG +A+ R ++ Sbjct: 172 FGWVTFFIQNNWKTFLKGTVVTLFISVTGTIVGFFIGLVVALFRYSEAEIDGQAKKYKKG 231 Query: 52 --TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISE 108 +++ + Y+ +FRGTP++VQ VI+YGL + + +A + +++N AY+SE Sbjct: 232 GLKVLNWLFSVYIAVFRGTPMIVQSMVIYYGLSQVFNLNLSPLIAALFIVSINTGAYMSE 291 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 IIR I SI GQ++A+ AIG+T Q ++ II PQ + +E I +K TSV + Sbjct: 292 IIRGGIDSIDTGQFEAAKAIGMTNFQLMKSIIFPQMFRNILPMIGNELIVNIKDTSVLNV 351 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 I++ E+F + + T + ++ + +Y LT +I +IE + Sbjct: 352 ISVTELFFISNSVAGTYSRYYEVFIITSVIYFFLTFTLSLILKQIEKRI 400 >gi|29828503|ref|NP_823137.1| glutamate transporter permease [Streptomyces avermitilis MA-4680] gi|29605606|dbj|BAC69672.1| putative glutamate ABC transporter permease [Streptomyces avermitilis MA-4680] Length = 214 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 107/199 (53%), Gaps = 6/199 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI-- 64 N++ D+F + T+ + + ++L++GF +A R+ + SL W+ Sbjct: 2 NVLTDNFSTF-AKGFLGTVELTVYASALALVLGFLMASFRV---APVASLRAFGTAWVTV 57 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 R TPL + F + GLP G+V V +++L SA+I E +RS I ++P+GQ +A Sbjct: 58 LRNTPLTLLFFAVLLGLPRFGLVLPFEVFAVLALGCYTSAFICEALRSGINTVPRGQGEA 117 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G+T +QT+ ++LPQ + P+ S I++ K++++A ++ E+ T + + Sbjct: 118 ARSLGMTFEQTLSVVVLPQAFRSVISPVGSTLIALAKNSAIAGAFSVNELLGTYKTLSEL 177 Query: 185 TYQPLIIYCELAFVYLILT 203 Y + + +A YLI+T Sbjct: 178 GYNIVWTFVWIAVGYLIIT 196 >gi|300901165|ref|ZP_07119270.1| putative ATP synthase F0, A subunit [Escherichia coli MS 198-1] gi|300959228|ref|ZP_07171304.1| putative ATP synthase F0, A subunit [Escherichia coli MS 175-1] gi|300314173|gb|EFJ63957.1| putative ATP synthase F0, A subunit [Escherichia coli MS 175-1] gi|300355404|gb|EFJ71274.1| putative ATP synthase F0, A subunit [Escherichia coli MS 198-1] Length = 255 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 119/214 (55%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ ++G F ++R + +S + YV +FR PL+VQ F Sbjct: 34 IWSGFQVTIALSICAWIIAFLVGSFFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 92 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F + F++ ++ L L +A + E +R++I S+P+GQ + Sbjct: 93 WYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 152 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 153 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 212 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ +F ++ +E V Sbjct: 213 YSAHAWESFTAITLAYVLINAFIMLVMTLVERKV 246 >gi|261400733|ref|ZP_05986858.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria lactamica ATCC 23970] gi|269209498|gb|EEZ75953.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria lactamica ATCC 23970] Length = 248 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 63/184 (34%), Positives = 100/184 (54%), Gaps = 27/184 (14%) Query: 60 FYVWIFRGTPLLVQLFVI------FYGLPHIGIV------------FDSFVAIIISLTLN 101 YV +FRGTPL VQ+ + F+ P GI+ + +A ++L N Sbjct: 68 LYVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILVSGEAAVELRRGYGPLIAGSLALVAN 127 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 AYI EI R+ I SI KGQ +A+ ++G+T Q +R++ILPQ + PL+SEFI++LK Sbjct: 128 SGAYICEIFRAGIQSIDKGQMEAARSLGMTYPQAMRYVILPQALRRMLPPLASEFITLLK 187 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCE----LAFVYLILTSFCYIIQIKIESSV 217 +S+ S I + E+ Q ++ Y +Y E +A +YL++T+F I +++E Sbjct: 188 DSSLLSVIAVAEL-AYVQNTITGRYS---VYEEPLYTVALIYLLMTTFLGWIFLRLEKRY 243 Query: 218 T-QH 220 QH Sbjct: 244 NPQH 247 >gi|89893954|ref|YP_517441.1| hypothetical protein DSY1208 [Desulfitobacterium hafniense Y51] gi|89333402|dbj|BAE82997.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 253 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/155 (34%), Positives = 91/155 (58%), Gaps = 13/155 (8%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLP-----HIGIVFDSFVAIIISLTLNFSAYIS 107 +++ ++ Y+ FRGTP++VQ VI+YG H+ +F A I +++N AY++ Sbjct: 63 VVNALLASYIEFFRGTPMIVQAMVIYYGSALAFDIHMNHIF----AGIFIVSINTGAYMA 118 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 EI+R IISI KGQ++A++AIG+ QT+ +++LPQ I +EF+ +K TSV + Sbjct: 119 EIVRGGIISIDKGQFEAAHAIGMNHIQTMFNVVLPQVIRNILPATGNEFVINIKDTSVLN 178 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 I++ E++ + I ++ Y E FV IL Sbjct: 179 VISVTELYFQTKSIAGNNFR----YFEAFFVACIL 209 >gi|121604974|ref|YP_982303.1| polar amino acid ABC transporter inner membrane subunit [Polaromonas naphthalenivorans CJ2] gi|120593943|gb|ABM37382.1| amino acid ABC transporter membrane protein 2, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 216 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 120/205 (58%), Gaps = 7/205 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLL 71 + L+ ++ T+ ++ ++F+ ++GF +A+ R++ + T +SL Y+ + +G PLL Sbjct: 10 KFLFDGLLWTVGLSVLAFIGGGLLGFAVALGRLYGWRATRTAVSL----YIKLIQGLPLL 65 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 V L + ++GLP +GI A ++L++ SAY+ EI R I S+P+ Q++A+ +GL Sbjct: 66 VLLPLAYFGLPSLGINVSPLAAAALALSIYVSAYLGEIWRGCIESVPRTQFEAAECLGLR 125 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 Q + H+ILPQ + + P + I+K+TS+AS I E+ + Q I ++T++P +I Sbjct: 126 WHQQLLHVILPQAVKIATPPTVGFMVQIVKNTSLASAIGFVELARAGQIINNSTFEPFVI 185 Query: 192 YCELAFVYLILTSFCYIIQIKIESS 216 + +A +Y L ++ ++E S Sbjct: 186 FVIVAALYFALCYPLSLLSRRLERS 210 >gi|227529348|ref|ZP_03959397.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] gi|227350776|gb|EEJ41067.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] Length = 225 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 115/210 (54%), Gaps = 11/210 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 S P +L + + +++ + I FV S ++G I ++RI +S I FY+ FRG P+ Sbjct: 20 QSLPTIL-SGLPLSIILLAICFVTSNVVGILIMLMRIS-KYRFLSGIARFYISFFRGVPM 77 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LV LF+ ++GL + A ++S T+ SA+++E RS++ + + Q+D++ A+G+ Sbjct: 78 LVVLFLTYFGLN-----MAALPAAVLSFTVVPSAFLAEYYRSALKGVSQTQYDSAKALGM 132 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + + + +IILPQ L + + + KSTS+A+ IT+ E+F A+ + + Sbjct: 133 SYRIMMTYIILPQAFRIVLPSLGNVLLDMFKSTSLAAMITVSEMFMKAKVVAGVNQDYMT 192 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQH 220 IY E+A +Y I+ C ++ E V H Sbjct: 193 IYIEIAIIYWIV---CCVLSWG-EQRVENH 218 >gi|209517529|ref|ZP_03266369.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209502062|gb|EEA02078.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 246 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 63/183 (34%), Positives = 103/183 (56%), Gaps = 13/183 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + VT+ ++ ++VI+LI+G V+R + S + YV IFR PL+VQ F+ Sbjct: 26 LLSGLWVTVTVSLSAWVIALIVGSLFGVLRTV-PNKWASGVGTVYVAIFRNIPLIVQFFI 84 Query: 77 IFYGLPH-----IGIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + +P IG F F A I+ L L +A + E +RS I ++P+GQ A Sbjct: 85 WYLVIPELLPVSIGTWFKQLPPGVQFFSASIVCLGLFTAARVCEQVRSGINALPRGQRAA 144 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 145 GLAVGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDY 204 Query: 185 TYQ 187 T Q Sbjct: 205 TSQ 207 >gi|134102704|ref|YP_001108365.1| putative amino acid ABC transporter permease protein [Saccharopolyspora erythraea NRRL 2338] gi|291007839|ref|ZP_06565812.1| putative amino acid ABC transporter permease protein [Saccharopolyspora erythraea NRRL 2338] gi|133915327|emb|CAM05440.1| putative amino acid ABC transporter permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 235 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 9/204 (4%) Query: 21 IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG 80 I +TL A + V + F A + ++ I Y+ FRG ++V F Y Sbjct: 18 IYLTLGGAALGLVFA-----FAAGLARGARSRVLRGIGFVYIEFFRGAAVIVLAFWFVYA 72 Query: 81 LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 LP +G + A I++L+LN AY +E++R +I ++P+ Q +A+ A+ +T Q +R ++ Sbjct: 73 LPSLGWQLEPLWAGILALSLNIGAYGAEVVRGAIRAVPQAQVEAATALNMTGWQRMRRVV 132 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL----A 196 LPQ P ++ I +LK+++V S ++IPE+ Q + + T + L Sbjct: 133 LPQAFVAMVPPFTNNLIELLKASAVVSVVSIPELTLQGQLVRNGTQASAATFGGLLIGYG 192 Query: 197 FVYLILTSFCYIIQIKIESSVTQH 220 + L+ I++ + +SV + Sbjct: 193 LIALVFVGLMRIVEFRAAASVGRR 216 >gi|227514608|ref|ZP_03944657.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum ATCC 14931] gi|227087019|gb|EEI22331.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum ATCC 14931] Length = 234 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 118/211 (55%), Gaps = 20/211 (9%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMHFYVWIFR 66 +DSF Q+ A VTL IA ++ V+ L++ +AV+R + I+++I+ F R Sbjct: 8 VDSFSQIASVA-PVTLLIAIVAAVVGLLLAILVAVVRERQVKVLAPIVAVIVSF----VR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLT---LNFSAYISEIIRSSI 114 GTP++VQL+V++YGLP + +V + A++I+ T LN A +SE IRS+ Sbjct: 63 GTPIIVQLYVVYYGLPQLLVVMKGWGWNTNPNGLPALVIAFTAFSLNVMANLSESIRSAY 122 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ GQ++A+ A+G+T + I I++PQ I ++ F+ ++K T++ I I EI Sbjct: 123 HAVDYGQYEAAVAVGMTPLRAIIQIVVPQLIANLIPNFTNIFLDLIKDTALVYNIGIVEI 182 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSF 205 A I + ++ L Y + +Y+I+ F Sbjct: 183 MGEANIISAIGFKYLETYVDALIIYIIICWF 213 >gi|319942092|ref|ZP_08016411.1| hypothetical protein HMPREF9464_01630 [Sutterella wadsworthensis 3_1_45B] gi|319804476|gb|EFW01354.1| hypothetical protein HMPREF9464_01630 [Sutterella wadsworthensis 3_1_45B] Length = 220 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 93/172 (54%), Gaps = 1/172 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L Y ++TL + I +++L +G AV R ++ I++ Y R TPLLVQLF Sbjct: 13 LYYEGALLTLRVGAIGILLALAVGMVTAVAR-YWRIPILNTAAVIYTEFSRNTPLLVQLF 71 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +++GLP +GI II L +Y++E +R+ + S+ Q +++ +GLT QT Sbjct: 72 FLYFGLPKVGIRISGEWCAIIGLAFIGGSYMAEALRAGLESVSTVQTESARVLGLTPFQT 131 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 + ++LPQ S PL + I ++K SV S I +P++ + ++ +Y+ Sbjct: 132 MMLVVLPQAFAVSVPPLVANIIFLIKEISVVSAIALPDLMYVTKDLIGNSYK 183 >gi|319405906|emb|CBI79538.1| glutamate/aspartate transport system permease protein GltJ [Bartonella sp. AR 15-3] Length = 250 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 107/191 (56%), Gaps = 7/191 (3%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMH----FYVWIFRGTPLLVQLFVIFYGLPHI-- 84 S ++++ +G I +IR +II+ + F+V I R PLLVQ+F+ ++ +P I Sbjct: 47 SLILAIFVGVIIGMIRTLPKTSIINNFLRAIGTFWVEIMRNIPLLVQVFLWYFVVPKIYP 106 Query: 85 -GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 I F + II +L SA I+E +RS I SIP GQ A+ A+G Q+ R+IILP+ Sbjct: 107 PAINFSPILLIICALGFFTSARIAEQVRSGIESIPSGQRYAAMAMGFNTYQSYRYIILPR 166 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I T PL+SE + I+K++S+A ++I E+ Q + + Y + +Y+I++ Sbjct: 167 AIRTIMPPLTSEAMGIVKNSSIAFAVSINELMQFQYQTIEEVSHVYENYLLVTILYIIIS 226 Query: 204 SFCYIIQIKIE 214 F +++ IE Sbjct: 227 LFIFVLMTIIE 237 >gi|241894752|ref|ZP_04782048.1| glutamate superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] gi|241871964|gb|EER75715.1| glutamate superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] Length = 483 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 2/187 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + +V TL + + +++ I G F+ ++ + S L ++IFRG P+LV F Sbjct: 282 LSSGLVKTLELTLVGIILAAIWGIFLGILGVMPSKLARGLSTTI-IYIFRGLPMLVLAFF 340 Query: 77 IFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+ G+P++ G +F A +I+L LN AYI + S+ GQ +A+ ++GL + Sbjct: 341 IYIGIPNLTGQKIPAFTAGVITLILNEGAYIGAFVSGGFKSVDSGQLEAARSLGLPYGKA 400 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R +++PQ I ++FI LK TS+ S I I E+ QT I++ Q ++ + Sbjct: 401 MRKVVMPQGIRLMIPSFINQFIITLKDTSILSAIGIIELTQTGTLIIARNLQGFRVWLMI 460 Query: 196 AFVYLIL 202 A +YLI+ Sbjct: 461 AVLYLIV 467 >gi|222148523|ref|YP_002549480.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221735509|gb|ACM36472.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 267 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 63/197 (31%), Positives = 111/197 (56%), Gaps = 16/197 (8%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 VT+ +A + L+IGF +A + S+ ++ Y IFRG P L+ LF+++YG Sbjct: 55 VTVTLAAATLPFGLLIGFLMA-LATQSSERMLRQAAAIYTTIFRGLPELLTLFIVYYGSQ 113 Query: 81 ------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L +G I ++F A +I+L L FS+Y +E+++S+ +IP GQ++A +AIGL Sbjct: 114 ILIQAVLASMGFEERIEINAFFAGMIALALVFSSYCAEVLQSAFRAIPSGQYEAGFAIGL 173 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT---AQRIVSTTYQ 187 +R +T+ +I+PQ I + + + ++++LK T++ S I + +I + A R+ + Sbjct: 174 SRTKTMLLVIVPQLIRIALPGIVNLWMNLLKDTALVSVIGLSDIIRQTGIAARVTKEAFL 233 Query: 188 PLIIYCELAFVYLILTS 204 I C L V IL+S Sbjct: 234 FYTIACALYLVLAILSS 250 >gi|163839929|ref|YP_001624334.1| glutamate transport system permease protein [Renibacterium salmoninarum ATCC 33209] gi|162953405|gb|ABY22920.1| glutamate transport system permease protein [Renibacterium salmoninarum ATCC 33209] Length = 512 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 62/191 (32%), Positives = 103/191 (53%), Gaps = 2/191 (1%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 S + +LI+G + +R+ T + + FYV + R TPL + F+G P +G Sbjct: 25 SAIFALILGVIVGALRVS-PVTPMRALGTFYVNVIRNTPLTLVFLFFFFGYPKLGFPNPG 83 Query: 91 FVAI-IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 FV + II+L+L + Y+SE IR+ I ++P GQ +AS AIGL QT+ +ILPQ Sbjct: 84 FVPLAIIALSLYTATYVSEAIRAGINTVPVGQAEASRAIGLPFGQTMSLVILPQAFRAVV 143 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYII 209 P+ S FI++LK+T+VA+ ++ E + Y + +A ++IL + ++ Sbjct: 144 PPMMSVFIALLKNTTVAAGFSVLEAGAIRSNLSERGYPAMQSLLWVALGFIILVAVLSLV 203 Query: 210 QIKIESSVTQH 220 Q K+E+ V Sbjct: 204 QRKLENEVESR 214 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 55/154 (35%), Positives = 95/154 (61%), Gaps = 4/154 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 TL ++ V SLI+G +AV R+ SD IS+ + ++ +FR PLL+ + ++FYGLP Sbjct: 286 TLSAFGVAAVGSLILGMVLAVGRL--SDRRWISVPVGWFTELFRAVPLLILMALMFYGLP 343 Query: 83 HIGI-VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IG F+A+++ L L + ++E+IR+ I+++PKGQ +A+YAIGL + + + I+L Sbjct: 344 SIGFQGMTPFIAVVVGLILYNGSVLAEVIRAGILAVPKGQSEAAYAIGLRKTRVMTMILL 403 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 PQ + T + ++ + LK T++ IT E+ Sbjct: 404 PQAVRTMLPVIIAQLVVALKDTALGFIITYQELL 437 >gi|153954685|ref|YP_001395450.1| hypothetical protein CKL_2067 [Clostridium kluyveri DSM 555] gi|146347543|gb|EDK34079.1| Hypothetical protein CKL_2067 [Clostridium kluyveri DSM 555] Length = 253 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 68/234 (29%), Positives = 121/234 (51%), Gaps = 19/234 (8%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E +I P +L A+ +TL I S VI+L++G + ++ + ++ I Y+ Sbjct: 19 EKLEFMISKMPIIL-NALPITLEILFFSVVIALVVGMILTYAKVG-KNKVVRCIASIYIS 76 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSF----------VAIIISLTLNFSAYISEIIRSS 113 RGTP++VQL + F G+P ++ DSF + II+ +LN +A+ +EI RS+ Sbjct: 77 FMRGTPMIVQLLLAFIGIP---LILDSFGISTANWNNIIYAIIAFSLNEAAFFAEIFRSA 133 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF-ISILKSTSVASTITIP 172 + I KGQ +A +IG+T+ QT R II Q + A+P ++ I ++K+TS+ I + Sbjct: 134 YLDIDKGQIEAGQSIGMTKFQTFRRIIFVQ-VAAKALPNTTNMIIELMKNTSLGIAIGVT 192 Query: 173 EIFQTAQRIVSTTY--QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 ++ A++I Y + AF+Y I+ I+ I + + ++ V Sbjct: 193 DLMGMAKQISYNNYGVGQTETFIVAAFIYWIMGLILTIVSSNITARLNRYNNPV 246 >gi|260462849|ref|ZP_05811054.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259031493|gb|EEW32764.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 269 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 115/213 (53%), Gaps = 25/213 (11%) Query: 25 LPIACI-SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-- 81 L + C+ F++++ +G A +F+ +L F + RGTPLL+QL++++YGL Sbjct: 63 LAVTCVLGFLLAVPLGLAQATGSFWFA----ALAKAFCT-VIRGTPLLIQLWLLYYGLGS 117 Query: 82 --PHIGIVFDSFVA---------IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P + +S++ +++LTL+F+ Y E++R + +PKGQ +A+ A G+ Sbjct: 118 LFPQYPWIRESWMWPYLRQAWPYGVLALTLSFAGYEGEVMRGAFAGVPKGQLEAARAFGM 177 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST---TYQ 187 +R + R I LPQ + L+ E + LKST + +TI++ +IF + ++ TY+ Sbjct: 178 SRWKIFRRIWLPQAFYRALPTLTGETVLQLKSTPLVATISVIDIFAVSSKVRQDTYLTYE 237 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 PL++ LA +Y+ +T +IE+ + Sbjct: 238 PLLL---LALIYMTITGILVFAFGRIEARIPNK 267 >gi|222081580|ref|YP_002540944.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726259|gb|ACM29348.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 216 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 49/146 (33%), Positives = 85/146 (58%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +SL + YV RG PL + LF+++YG P G+V +VA I+ L L + +EI R+ Sbjct: 48 LSLAVRVYVEFARGAPLALVLFLLYYGGPQFGLVLSPYVAGIVGLGLYGAGPFAEIFRAG 107 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++PKG+ +A+ +GLT QT ++ LPQ + + P + I+++K ++V S IT+ E Sbjct: 108 FNAVPKGECEAAAMLGLTPGQTFLYVELPQAMRLTLPPSIGQAINLVKESAVLSVITLGE 167 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVY 199 + + A I S ++ + Y +A +Y Sbjct: 168 LTKVAGTISSISFAVVTPYVTVALLY 193 >gi|119510484|ref|ZP_01629617.1| permease protein of amino acid ABC transporter [Nodularia spumigena CCY9414] gi|119464906|gb|EAW45810.1| permease protein of amino acid ABC transporter [Nodularia spumigena CCY9414] Length = 306 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 106/203 (52%), Gaps = 32/203 (15%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTP 69 D++ + L+ +V +L +A + + I+G + R+ SD ++ I YV IFR TP Sbjct: 73 DTYSRALWVGLVNSLRVAVLGIFFTTIVGISAGIARL--SDNWLVRKITTIYVEIFRNTP 130 Query: 70 LLVQL----FVIFYGLPH----------IGIVFDS-----------FVAIIISLTLNFSA 104 LL+QL F +F G P +GI D F A+++ L A Sbjct: 131 LLLQLLFWYFAVFLGFPRREDKISLWGFLGISQDGIELPWFSLSPEFSALLLGLVFFTGA 190 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 +I+EI+R I S+PKGQW+A+ ++G +R +I PQ + PL+S+++++ K++S Sbjct: 191 FIAEIVRGGIQSVPKGQWEAARSLGFPPLLIMRLVIFPQALRVIIPPLTSQYLNLTKNSS 250 Query: 165 VASTITIPEIFQTAQRIVSTTYQ 187 +A I P+I+ A STT+ Sbjct: 251 LAIAIGYPDIYFVA----STTFN 269 >gi|324016085|gb|EGB85304.1| putative ATP synthase F0, A subunit [Escherichia coli MS 117-3] Length = 255 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 119/214 (55%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ ++G F ++R + +S + YV +FR PL+VQ F Sbjct: 34 IWSGFQVTIALSICAWIIAFLVGSFFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 92 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F + F++ ++ L L +A + E +R++I S+P+GQ + Sbjct: 93 WYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 152 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 153 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 212 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ +F ++ +E V Sbjct: 213 YSAHAWESFTAITLAYVLINAFIMLVMTLVERKV 246 >gi|258623968|ref|ZP_05718921.1| arginine ABC transporter, permease protein [Vibrio mimicus VM603] gi|262173969|ref|ZP_06041646.1| arginine ABC transporter permease protein ArtM [Vibrio mimicus MB-451] gi|258583762|gb|EEW08558.1| arginine ABC transporter, permease protein [Vibrio mimicus VM603] gi|261891327|gb|EEY37314.1| arginine ABC transporter permease protein ArtM [Vibrio mimicus MB-451] Length = 222 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 96/179 (53%), Gaps = 18/179 (10%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS---------L 98 +FS +I+L F GTPLLVQ+F+++YG + +S + + +S L Sbjct: 47 WFSRALITL--------FTGTPLLVQIFLVYYGPGQFEWIRESVLWVWLSQPWFCAMFAL 98 Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158 LN +AY +++ + + +IP GQW A A+G+ + T+R ++LP + + S+E I Sbjct: 99 ALNTAAYSTQLFKGAFNAIPSGQWQACRALGMNKVATLR-VLLPYALRRAVPAYSNEVIL 157 Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + K TS+ASTITI ++ AQRI + TY L ++ YL + ++ +IE Sbjct: 158 VFKGTSLASTITIMDLMGYAQRINAQTYDTLTVFGVAGAFYLAVNGALTLLFRQIEKKA 216 >gi|219668329|ref|YP_002458764.1| polar amino acid ABC transporter inner membrane subunit [Desulfitobacterium hafniense DCB-2] gi|219538589|gb|ACL20328.1| polar amino acid ABC transporter, inner membrane subunit [Desulfitobacterium hafniense DCB-2] Length = 252 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/155 (34%), Positives = 91/155 (58%), Gaps = 13/155 (8%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLP-----HIGIVFDSFVAIIISLTLNFSAYIS 107 +++ ++ Y+ FRGTP++VQ VI+YG H+ +F A I +++N AY++ Sbjct: 62 VVNALLASYIEFFRGTPMIVQAMVIYYGSALAFDIHMNHIF----AGIFIVSINTGAYMA 117 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 EI+R IISI KGQ++A++AIG+ QT+ +++LPQ I +EF+ +K TSV + Sbjct: 118 EIVRGGIISIDKGQFEAAHAIGMNHIQTMFNVVLPQVIRNILPATGNEFVINIKDTSVLN 177 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 I++ E++ + I ++ Y E FV IL Sbjct: 178 VISVTELYFQTKSIAGNNFR----YFEAFFVACIL 208 >gi|209547515|ref|YP_002279433.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538759|gb|ACI58693.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 219 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 104/190 (54%), Gaps = 5/190 (2%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWIFRGTPLLVQ 73 L+ +VTL + + ++L++ F + R+ FF+ + + Y+ FRGT + VQ Sbjct: 10 LILEGALVTLQLTVMGSALALVMAFLAGLGRLSRFFA---VRALATAYIEFFRGTSIFVQ 66 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LF +++ LP G+ A +++L LN AY +E++R ++ ++ + Q +A A+ L+R Sbjct: 67 LFWVYFVLPFAGLTLTPLQAGVLALGLNVGAYAAEVVRGAVKAVGREQSEACVALNLSRY 126 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q +RH+ILPQ + + I +LK T+V S I++ ++ AQ + + T L+ + Sbjct: 127 QRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTDMTFQAQVVRAQTGSTLVPFA 186 Query: 194 ELAFVYLILT 203 + +Y ++ Sbjct: 187 TILILYFLMA 196 >gi|220910019|ref|YP_002485330.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece sp. PCC 7425] gi|219866630|gb|ACL46969.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7425] Length = 305 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 30/213 (14%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPL 70 S+ + L +V +L + V++ I+G + R+ SD ++ + YV I R PL Sbjct: 75 SYWRALLVGLVNSLRVMISGIVLATIVGVLAGIARL--SDNWLMRQLATLYVEILRNAPL 132 Query: 71 LVQL----FVIFYGLPHIGIVF------------------DSFVAIIISLTLNFSAYISE 108 L+QL FV+F LP GI F F A+++ LT +I+E Sbjct: 133 LLQLLFWYFVVFLSLPQ-GISFLGFSLSQTGISLGELNLSPEFCALLLGLTFYTGTFIAE 191 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I+R I S+P+GQW+A+ ++GL QT+ +I PQ++ PL ++++++ K++S+A Sbjct: 192 IVRGGIQSVPRGQWEAARSLGLKPAQTLWLVIFPQSLRAIVPPLGNQYLNLAKNSSLALA 251 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 + P+++ A STTY E+ + LI Sbjct: 252 VGYPDLYAVA----STTYNQTGRAVEMMLLILI 280 >gi|158424111|ref|YP_001525403.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158331000|dbj|BAF88485.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 221 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 2/185 (1%) Query: 4 EWFNL-IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++FNL I+ L+ + +TL + C + L+ G +A+ S L+ F + Sbjct: 7 QFFNLDIMRQAAPLVLQGLGMTLMVCCAVIPLGLVGGLIVALGSRARSRLARGLLAGF-I 65 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + R P LV L I GLP GI F + ++L LN SAY E+ R+ + S+ GQW Sbjct: 66 DVLRALPPLVLLIAISAGLPFAGIRLSPFACVTLALFLNTSAYYGEVYRAGLDSVSHGQW 125 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ GL+ Q + ++I+PQ + L S + ++K TS+AS + +PE+ +A Sbjct: 126 EAARCTGLSASQAMFYVIIPQAVRNVLPDLVSNTVEVVKLTSLASVVALPEMLYSADMAR 185 Query: 183 STTYQ 187 S T+ Sbjct: 186 SLTFN 190 >gi|74311405|ref|YP_309824.1| arginine transporter permease subunit ArtM [Shigella sonnei Ss046] gi|73854882|gb|AAZ87589.1| arginine 3rd transport system permease protein [Shigella sonnei Ss046] gi|323165794|gb|EFZ51580.1| arginine transport system permease protein artM [Shigella sonnei 53G] Length = 222 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 121/218 (55%), Gaps = 14/218 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + + P+L+ + +L + S +++LI+ +I + ++ L+ Y+ +F GT Sbjct: 1 MFEYLPELM-KGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLV-RGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW + A+G+++K T+ ++LP S S+E + + KSTS+A TIT+ E+ + Sbjct: 119 EGQWQSCSALGMSKKDTL-ALLLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMGYS 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 Q + TY ++++ +YL++ ++ IE Sbjct: 178 QLLYGRTYD-VMVFGAAGIIYLVVNGLLTLMMRLIERK 214 >gi|293603254|ref|ZP_06685685.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292818343|gb|EFF77393.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 233 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 114/208 (54%), Gaps = 11/208 (5%) Query: 6 FNLIIDS-FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 FN I +P L+ V TL +A +++V++ +G +AVIR+ S + + ++ YV Sbjct: 7 FNAIFQGEYPSWLFRGFVTTLALAGLAWVLAFCVGSLLAVIRLTGSP-VANAVIATYVAF 65 Query: 65 FRGTPLLVQLFVIFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 R P+LV + ++G+P + F+ I+++L SAYI E +RS++ Sbjct: 66 HRNVPMLVHILFWYFGVPALLPQAASDWLNSHGSEFIMSCIAISLVMSAYICEDLRSAVR 125 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 IP GQ +A+ A+GL +T+R ++LPQ + PL ++ + +LK+TS+A I + E+ Sbjct: 126 GIPPGQVEAARALGLGFLRTMRCVVLPQAFRIAIPPLLNQTLLLLKNTSLAMAIGVTELT 185 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 + I + T++ Y + +YL+L+ Sbjct: 186 AAGREIENYTFRTFEAYAVVTVIYLVLS 213 >gi|295096602|emb|CBK85692.1| L-glutamate ABC transporter membrane protein/L-aspartate ABC transporter membrane protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 246 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 118/214 (55%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++ +++I+ ++G ++R + +S I YV +FR PL+VQ F Sbjct: 25 LWSGFQVTVALSITAWIIAFLVGSLFGILRTV-PNRFLSSIGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPHI-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P + G+ F + FV+ ++ L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVIPELLPEDLGMWFKAELDPNVQFFVSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ +F ++ +E V Sbjct: 204 YSAHAWESFTAITLAYVLINAFIMLVMNLVERKV 237 >gi|241554228|ref|YP_002979441.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863534|gb|ACS61196.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 213 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 57/174 (32%), Positives = 97/174 (55%), Gaps = 3/174 (1%) Query: 33 VISLIIGFFIAVI---RIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+S++IGF IA++ + ++ L ++ FRG PLLVQL +I+ LP I I Sbjct: 21 VVSILIGFAIAIVISAMLLSQQRLLVLPAKIFISFFRGVPLLVQLLLIYNLLPAIDINVP 80 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 S VA I+ L+L +AY +E +R S+P G +++ +G++ Q R I P + + Sbjct: 81 SIVAAIVGLSLCTAAYQAENLRGGFASVPMGLVESAEMVGMSPVQIFRRIKAPIALRLTF 140 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +E I ILK++S+ S + + E+ + AQ + +T+ PL I+ +Y I+ Sbjct: 141 PALVNEAILILKASSLVSVVGVIELTRMAQDLAGSTFLPLEIFASAGLIYFIIN 194 >gi|223932682|ref|ZP_03624681.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] gi|223898652|gb|EEF65014.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] Length = 232 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 113/205 (55%), Gaps = 7/205 (3%) Query: 3 YEWFNLI--IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 Y W N + FP + + TL I+ +F++++ +G + + ++ +I Sbjct: 9 YAWENWVSYFKDFPTF-FQGFLFTLAISVGAFIMAMFLGIVFGSLSSS-KNKVLKIIARV 66 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIG--IVFDS-FVAIIISLTLNFSAYISEIIRSSIISI 117 YV ++ TPLLVQ +++YGLP I ++ S + +I + L AYI+E+IR+ I ++ Sbjct: 67 YVEYYQNTPLLVQFMIVYYGLPLISNYVLMPSIYWTAVICIGLYHGAYIAEVIRAGIEAV 126 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +A+ + G T+ +T+R IILPQ I T PL+++ ++++K+T+ + I+ +I Sbjct: 127 PTGQTEAALSQGFTQSETMRIIILPQAIPTILPPLTNQVVNLIKNTATVAIISGADIMFM 186 Query: 178 AQRIVSTTYQPLIIYCELAFVYLIL 202 + + + + AF+Y I+ Sbjct: 187 TKSWSAMNANYIPAFAGAAFLYFIM 211 >gi|153809859|ref|ZP_01962527.1| hypothetical protein RUMOBE_00240 [Ruminococcus obeum ATCC 29174] gi|149834037|gb|EDM89117.1| hypothetical protein RUMOBE_00240 [Ruminococcus obeum ATCC 29174] Length = 272 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/164 (32%), Positives = 93/164 (56%), Gaps = 13/164 (7%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYG------LPHIG----IVFDSFVAIIISLTLNFS 103 +S I YV I R TP+LVQ+F+I+YG LP I F+ F +++L +N Sbjct: 93 LSFIATAYVEILRSTPVLVQIFIIYYGVFGMIDLPSFQLFGFIKFNRFFPGVVALGMNSG 152 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AY+ EI+R+ I SI +GQ +A+ ++GL++ +R+IILPQ + +++EF+ I+K + Sbjct: 153 AYLCEIMRAGIQSIDQGQTEAARSLGLSQTMNLRYIILPQALKNILPAIANEFVVIIKES 212 Query: 164 SVASTITIPEIFQTAQRIVSTTY---QPLIIYCELAFVYLILTS 204 ++ TI + +I + T+ +PL++ + F TS Sbjct: 213 AITYTIGVQDIMSAVNAVKGATFIIIEPLLVATAIYFCLCFPTS 256 >gi|330832442|ref|YP_004401267.1| polar amino acid ABC transporter inner membrane subunit [Streptococcus suis ST3] gi|329306665|gb|AEB81081.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis ST3] Length = 232 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 113/205 (55%), Gaps = 7/205 (3%) Query: 3 YEWFNLI--IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 Y W N + FP + + TL I+ +F++++ +G + + ++ +I Sbjct: 9 YAWENWVSYFKDFPTF-FQGFLFTLAISVGAFIMAMFLGIVFGSLSSS-KNKVLKIIARV 66 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIG--IVFDS-FVAIIISLTLNFSAYISEIIRSSIISI 117 YV ++ TPLLVQ +++YGLP I ++ S + +I + L AYI+E+IR+ I ++ Sbjct: 67 YVEYYQNTPLLVQFMIVYYGLPLISNYVLMPSIYWTAVICVGLYHGAYIAEVIRAGIEAV 126 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +A+ + G T+ +T+R IILPQ I T PL+++ ++++K+T+ + I+ +I Sbjct: 127 PTGQTEAALSQGFTQSETMRIIILPQAIPTILPPLTNQVVNLIKNTATVAIISGADIMFM 186 Query: 178 AQRIVSTTYQPLIIYCELAFVYLIL 202 + + + + AF+Y I+ Sbjct: 187 TKSWSAMNANYIPAFAGAAFLYFIM 211 >gi|239820512|ref|YP_002947697.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] gi|239805365|gb|ACS22431.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 226 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 83/149 (55%), Gaps = 9/149 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIR 111 YV FRGTP LVQLF+++YG ++ D + ++I+L LN +AY + + Sbjct: 57 YVLFFRGTPALVQLFLLYYGAGQFDLIRHSVLWPVLRDPYWCVVIALGLNSAAYTGKTLG 116 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 +++ +IP+G +A+ +GL R Q I LP + + +E I K+TS+AST+T+ Sbjct: 117 AALAAIPRGTREAARVLGLGRAQAFGLIDLPLAVRAALPAFGNEIILTCKATSLASTVTL 176 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 E+ +A+ + + TY P I+ VYL Sbjct: 177 LELTGSARLLTAETYAPYEIFLGAGLVYL 205 >gi|226938962|ref|YP_002794033.1| GltJ [Laribacter hongkongensis HLHK9] gi|226713886|gb|ACO73024.1| GltJ [Laribacter hongkongensis HLHK9] Length = 248 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 23/207 (11%) Query: 2 KYEW-FNLIIDSFP-------QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI 53 +Y+W + +I+ P Q L + + T+ A +++I+L+IG + V R + Sbjct: 3 QYQWNWGVILQGVPDTEEFYYQWLLSGLGWTIATALCAWIIALVIGTLVGVGRTV-PNKA 61 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-----------GIVFDSFVAIIISLTLNF 102 +S + YV +FR PL+VQ+F+ F+ P + F +I+L Sbjct: 62 VSGLTTAYVELFRNVPLIVQMFLWFFVFPEFLPETASNWVKQSMPLPEFSTAVIALGFYT 121 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 SA ++E +R+ I+++ +GQ +A A+GLT QT R+++LP PL+SEF++I K+ Sbjct: 122 SARVAEQVRTGILTLSRGQKNAGLALGLTLGQTYRYVMLPMAFRIIVPPLTSEFMNIFKN 181 Query: 163 TSVASTITIPEI-FQTAQRIVSTTYQP 188 ++VA I + E+ FQ Q ++ Y P Sbjct: 182 SAVALAIGLTELTFQMRQ--MTGEYAP 206 >gi|49082214|gb|AAT50507.1| PA1341 [synthetic construct] Length = 249 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 101/175 (57%), Gaps = 15/175 (8%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A + T+ IA + ++I+L +G + V+R + ++S I YV IFR PLLVQLF+ + Sbjct: 27 AGLGWTIAIALVGWIIALALGSLLGVMRTV-PNRLVSGIATAYVEIFRNVPLLVQLFIWY 85 Query: 79 YGLPHI---GI----------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 + +P + G+ +++++++ L L +A + E +R+ I ++P GQ A+ Sbjct: 86 FLVPDLLPEGLQTWFKQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQALPYGQTSAA 145 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 A+G Q RH++LPQ PL+SEF++I K++SVAS I + E+ QT Q Sbjct: 146 RAMGFRLPQIYRHVLLPQAFRIIIPPLTSEFLNIFKNSSVASLIGLMELLAQTKQ 200 >gi|51244842|ref|YP_064726.1| glutamine ABC transporter, permease protein [Desulfotalea psychrophila LSv54] gi|50875879|emb|CAG35719.1| related to glutamine ABC transporter, permease protein [Desulfotalea psychrophila LSv54] Length = 336 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 52/158 (32%), Positives = 95/158 (60%), Gaps = 12/158 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI---------IISLTLNFSAYISEIIR 111 Y+ + RGTPL+VQ+F+ ++ + ++ F + + I +I+L AY +EI+R Sbjct: 169 YIELIRGTPLMVQIFLWYFVVGNLINAFLTQIGIGGVPPLWFGVIALATFTGAYTAEIVR 228 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + I S+ +GQ +A+ ++GLT +++R +ILPQ + PL+ +FIS++K +S+ I I Sbjct: 229 AGIQSVHRGQMEAARSLGLTYAESMRKVILPQALRRIMPPLAGQFISLIKDSSLLGVIAI 288 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT---SFC 206 E+ + + IVS++ P ++ A +YL+LT S C Sbjct: 289 REVTKATREIVSSSLMPYEMWITCALLYLVLTFALSLC 326 >gi|15596538|ref|NP_250032.1| amino acid ABC transporter membrane protein [Pseudomonas aeruginosa PAO1] gi|107100792|ref|ZP_01364710.1| hypothetical protein PaerPA_01001820 [Pseudomonas aeruginosa PACS2] gi|116049293|ref|YP_791904.1| putative permease of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|218892554|ref|YP_002441423.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254234460|ref|ZP_04927783.1| hypothetical protein PACG_00312 [Pseudomonas aeruginosa C3719] gi|254239712|ref|ZP_04933034.1| hypothetical protein PA2G_00336 [Pseudomonas aeruginosa 2192] gi|313106332|ref|ZP_07792575.1| LOW QUALITY PROTEIN: putative permease of ABC transporter [Pseudomonas aeruginosa 39016] gi|9947281|gb|AAG04730.1|AE004563_7 amino acid ABC transporter membrane protein [Pseudomonas aeruginosa PAO1] gi|115584514|gb|ABJ10529.1| putative permease of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|126166391|gb|EAZ51902.1| hypothetical protein PACG_00312 [Pseudomonas aeruginosa C3719] gi|126193090|gb|EAZ57153.1| hypothetical protein PA2G_00336 [Pseudomonas aeruginosa 2192] gi|218772782|emb|CAW28567.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|310879077|gb|EFQ37671.1| LOW QUALITY PROTEIN: putative permease of ABC transporter [Pseudomonas aeruginosa 39016] Length = 248 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 101/175 (57%), Gaps = 15/175 (8%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A + T+ IA + ++I+L +G + V+R + ++S I YV IFR PLLVQLF+ + Sbjct: 27 AGLGWTIAIALVGWIIALALGSLLGVMRTV-PNRLVSGIATAYVEIFRNVPLLVQLFIWY 85 Query: 79 YGLPHI---GI----------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 + +P + G+ +++++++ L L +A + E +R+ I ++P GQ A+ Sbjct: 86 FLVPDLLPEGLQTWFKQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQALPYGQTSAA 145 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 A+G Q RH++LPQ PL+SEF++I K++SVAS I + E+ QT Q Sbjct: 146 RAMGFRLPQIYRHVLLPQAFRIIIPPLTSEFLNIFKNSSVASLIGLMELLAQTKQ 200 >gi|315287081|gb|EFU46495.1| putative ATP synthase F0, A subunit [Escherichia coli MS 110-3] Length = 257 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 119/214 (55%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ ++G F ++R + +S + YV +FR PL+VQ F Sbjct: 36 IWSGFQVTIALSICAWIIAFLVGSFFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 94 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F + F++ ++ L L +A + E +R++I S+P+GQ + Sbjct: 95 WYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 154 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 155 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 214 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ +F ++ +E V Sbjct: 215 YSAHAWESFTAITLAYVLINAFIMLVMTLVERKV 248 >gi|298485705|ref|ZP_07003784.1| Amino acid ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159731|gb|EFI00773.1| Amino acid ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 198 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 66/184 (35%), Positives = 112/184 (60%), Gaps = 1/184 (0%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 S V+S+++GF A+ R+ S + I FY FRGTPLL+Q+ +I+ GLP +GIV + Sbjct: 5 SIVVSVLLGFVTALARLS-SSAVAFGIASFYASFFRGTPLLIQILLIYLGLPQLGIVPGA 63 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 A +I+L+LN+ AY+SEI R+ II + GQ +A+ A+ L Q + LPQ + T Sbjct: 64 ITAGVIALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPAQIFWRVTLPQAMRTIIP 123 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 P +++FIS+LK +S+ S + + E+ AQ ++Y+ + + A +Y I++ ++Q Sbjct: 124 PTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQ 183 Query: 211 IKIE 214 ++E Sbjct: 184 SRLE 187 >gi|302876280|ref|YP_003844913.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium cellulovorans 743B] gi|307687012|ref|ZP_07629458.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium cellulovorans 743B] gi|302579137|gb|ADL53149.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium cellulovorans 743B] Length = 221 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 74/131 (56%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I+ YV + R TPLL+QLF ++YGLP +G+ D+ ++ L +Y+SE R + Sbjct: 54 IVGVYVEVSRNTPLLIQLFFLYYGLPQVGVKLDAITCAVVGLAFLGGSYMSEAFRGGFEA 113 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + K Q +A +IGLT+ Q IR++I Q + L + I ILK TS+ S I + ++ Sbjct: 114 VSKTQVEAGLSIGLTKPQLIRYVIFLQAFAVAVPSLGANAIFILKETSIVSAIALADLMF 173 Query: 177 TAQRIVSTTYQ 187 A+ ++ Y+ Sbjct: 174 VAKDLIGMYYK 184 >gi|104781754|ref|YP_608252.1| amino acid ABC transporter permease [Pseudomonas entomophila L48] gi|95110741|emb|CAK15454.1| putative amino acid ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 239 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 13/222 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 + Q L A +VT+ +A I L +G +A+ + F +FRG P Sbjct: 13 GGWGQALLAGALVTVSLALACLPIGLPLGLVVALAARSRKRLPRAWATTFST-VFRGLPE 71 Query: 71 LVQLFVIFYG--------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 L+ L +I+YG L +G ++ ++F+A +I+ +L F+A+ SEI + ++P Sbjct: 72 LLTLLIIYYGCQIAAQKILAALGYPGEVLINTFLAAMIAFSLVFAAFSSEIWLMAFKTLP 131 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A A+GL R+ ++LPQ + LS+ ++S+LK TS+ STI++ ++ + Sbjct: 132 KGQLEACSALGLGRRTGFFKVVLPQLARIALPGLSNNWLSLLKDTSLVSTISLIDLMRQT 191 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 VS T +P+ Y VYL+ ++ + +E +H Sbjct: 192 NLAVSVTKEPMFFYGVACLVYLLFSALSGRVFALLERRNNRH 233 >gi|77465462|ref|YP_354965.1| ABC polar amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|77389880|gb|ABA81064.1| ABC polar amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] Length = 221 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 48/123 (39%), Positives = 71/123 (57%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 R P LV L I+ GLP G+ F A+ ++ LN SAY +EI R+ I S+P GQ +A Sbjct: 68 LRALPPLVLLIFIYSGLPFAGLAISPFAAVAVAFFLNNSAYYAEIYRAGIQSVPAGQTEA 127 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A GLT QT+ H++LPQ + L S + ++K TS+AS +++ E+ +A S Sbjct: 128 ARACGLTTGQTLAHVVLPQAVRNVLPDLLSNTVEVVKLTSLASVVSLAELLYSANMARSL 187 Query: 185 TYQ 187 TY Sbjct: 188 TYN 190 >gi|302518222|ref|ZP_07270564.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. SPB78] gi|302427117|gb|EFK98932.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. SPB78] Length = 334 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 114/216 (52%), Gaps = 23/216 (10%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF- 78 + +TL + + V+ ++G +A+ R+ S+ ++S + Y+W FR TP+LVQL F Sbjct: 113 GLGLTLWLTALVMVLGFVLGTLLALGRMS-SNPVLSWVSSGYIWFFRSTPILVQLLFWFN 171 Query: 79 ----YGLPHIGIVFD-SFVAI------------IISLTLNFSAYISEIIRSSIISIPKGQ 121 Y +GI F FV + ++ LTL+ +AY +E++R ++S+ +GQ Sbjct: 172 IGALYPRLGLGIPFGPEFVTVKTVNLLGPVTVAVLGLTLHEAAYAAEVVRGGLLSVDRGQ 231 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++GL+ + +R I+LPQ + P + I LK TS+ S I + ++ + Q + Sbjct: 232 IEAAQSLGLSPWRRLRRIVLPQAMRAIVPPAGNMLIGALKGTSIVSVIAVQDLLYSVQLV 291 Query: 182 VSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIES 215 TYQ PL++ + Y ++TS + Q +E Sbjct: 292 YHRTYQVIPLLLVATI--WYALVTSVLSVGQHYVEK 325 >gi|221369463|ref|YP_002520559.1| Polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] gi|332561119|ref|ZP_08415437.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides WS8N] gi|221162515|gb|ACM03486.1| Polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] gi|332274917|gb|EGJ20233.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides WS8N] Length = 221 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 48/123 (39%), Positives = 71/123 (57%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 R P LV L I+ GLP G+ F A+ ++ LN SAY +EI R+ I S+P GQ +A Sbjct: 68 LRALPPLVLLIFIYSGLPFAGLAISPFAAVAVAFFLNNSAYYAEIYRAGIQSVPAGQTEA 127 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A GLT QT+ H++LPQ + L S + ++K TS+AS +++ E+ +A S Sbjct: 128 ARACGLTTGQTLAHVVLPQAVRNVLPDLLSNTVEVVKLTSLASVVSLAELLYSANMARSL 187 Query: 185 TYQ 187 TY Sbjct: 188 TYN 190 >gi|300718315|ref|YP_003743118.1| polar amino acid ABC transporter permease [Erwinia billingiae Eb661] gi|299064151|emb|CAX61271.1| polar amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 249 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 123/224 (54%), Gaps = 13/224 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLIMHFYVW 63 L++ +P ++ TL I+ ++ +++ IG + + RI +FS +V+ Sbjct: 15 LLMGQYPNGPLGGVLCTLLISVLAVLLAFPIGVLLGLARISPWRWFSWPAAC-----WVY 69 Query: 64 IFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RG PLL+ +F ++ +P IG F ++ +L + SAYI+EI+R I ++P GQ+ Sbjct: 70 VLRGIPLLMVVFWTYFCVPLLIGHNISGFATMLCTLVIYESAYIAEIVRGGIQALPGGQY 129 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS A+G++ +T+R +ILPQ + + L S+ +SI+K +++ I +PE+ A ++ Sbjct: 130 EASRALGMSYLKTLRVVILPQALYNALPSLVSQLVSIIKDSTLGYVINVPELTYAANQVN 189 Query: 183 STTY-QPLIIYCELAF-VYLILTSFCYIIQIKIESSVTQHTYSV 224 + +P ++ +A YLI S ++ K+E + + +V Sbjct: 190 NQLLTKPFQVFAIVAISYYLICFSLTWLAN-KLEERIARKRRNV 232 >gi|240947951|ref|ZP_04752378.1| arginine transporter permease subunit ArtQ [Actinobacillus minor NM305] gi|240297745|gb|EER48204.1| arginine transporter permease subunit ArtQ [Actinobacillus minor NM305] Length = 223 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 116/198 (58%), Gaps = 14/198 (7%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH---FYVWIFRGTPLLV 72 L+Y+A ++TL +A + SLI+G ++++ + + +S+I ++ + RG P ++ Sbjct: 8 LIYSATLMTLGLA----LASLIVGLLLSILFVSLETSKLSVISKPTTVFLALLRGLPEIL 63 Query: 73 QLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 + +I++G L I F +F +++L+L F+AY S+ +R +I ++P GQW++ Sbjct: 64 VVLLIYFGSTELIEKLTGEYIEFSAFNCGVLALSLIFAAYASQSLRGAIQAVPVGQWESG 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL+R T HII+PQ + LS++++ +LK T++ S I + ++ + ++ I + Sbjct: 124 TALGLSRGYTFIHIIMPQVWRHALPGLSNQWLVLLKDTALVSLIGVHDLMRQSELINTNE 183 Query: 186 YQPLIIYCELAFVYLILT 203 +QP + A +YL +T Sbjct: 184 HQPFTWFGLAALIYLAIT 201 >gi|187919547|ref|YP_001888578.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187717985|gb|ACD19208.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 216 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 106/190 (55%), Gaps = 4/190 (2%) Query: 35 SLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF 91 L+IGFF+A+ + + YV+ FRG P+LVQL +++Y LP GI Sbjct: 28 GLLIGFFVAIGVCAARLSPNRAARMFGGAYVFFFRGVPMLVQLLLVYYLLPFAGINVSPI 87 Query: 92 VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP 151 VA + +++L ++YI+EI+R +S+P G +A+ +GL+ +R I++PQ + Sbjct: 88 VAALSAVSLCSASYIAEILRGGFLSVPPGHLEAARMLGLSPFDMLRRILVPQAFRLTLPS 147 Query: 152 LSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 L +E + ++K++S+ S + + E+ +TAQ I ++TY+PL Y +Y ++ ++ Sbjct: 148 LVNEMVLLIKASSLISVVGVAELTRTAQNIAASTYRPLEAYVAAGLIYFVICGALALVAH 207 Query: 212 KIESSVTQHT 221 E + QH Sbjct: 208 AAEYRL-QHA 216 >gi|323697578|ref|ZP_08109490.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323457510|gb|EGB13375.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 587 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 103/198 (52%), Gaps = 10/198 (5%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 L+ I TL I S I+L++G + R+ S + YV +FR TPLL+QL Sbjct: 53 HLMLNGINTTLTITVYSAAIALVMGTVFGLARLS-SFKPVYWFSTCYVELFRNTPLLIQL 111 Query: 75 FVIFYGLPHIG------IVFD---SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 F + LP+ +FD F + + A+++EIIR+ I SIPKG +A+ Sbjct: 112 FFWNFALPYAFPEELRLKLFDMNFEFWCATVGCGIFTGAFMAEIIRAGIQSIPKGLLEAA 171 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y+ GLT QT+R +ILP PL SEF++ +K+TS+A TI + E+ + + S T Sbjct: 172 YSSGLTFPQTLRKVILPLAFREIIPPLGSEFLNNMKNTSLAMTIGVTELCWSMTEVYSLT 231 Query: 186 YQPLIIYCELAFVYLILT 203 Y+ + VYL L+ Sbjct: 232 YRTFEAFSVATVVYLGLS 249 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 4/202 (1%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 +A IS S IG + + R + + + Y+ + RG PL++ + + + Sbjct: 386 MAAISITGSFFIGLVVGMGRTA-HNRVFRIPCLLYIELIRGVPLILVILWFYQAILEFVF 444 Query: 87 VFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQT 144 D +F A I++T F AYI+E +R I +IP GQ +A+ A GLT QT+R I+LPQ Sbjct: 445 KVDVQAFWAATIAMTFFFGAYIAETVRGGIENIPPGQVEAAKASGLTYLQTMRKIVLPQA 504 Query: 145 ITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST-TYQPLIIYCELAFVYLILT 203 + L FI+ K TS+A I + E+ + A I + P IY +A +Y + + Sbjct: 505 LKQMLPALVGMFIAAFKDTSLAYIIGVMELTRAAYAINNRIMVYPFEIYTTVAVLYFVFS 564 Query: 204 SFCYIIQIKIESSVTQHTYSVD 225 F + ++E ++ T ++ Sbjct: 565 YFMSLYAKRLERKLSPETVRIE 586 >gi|322411345|gb|EFY02253.1| amino acid ABC transporter, permease protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 233 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 65/219 (29%), Positives = 122/219 (55%), Gaps = 10/219 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 + FP L A + TL ++ + ++++++G I + ++ YV ++ TPL Sbjct: 20 NHFP-LFLKAFLYTLGVSLAALLLAMVLGVIIGGLSTA-KQKGSRIVSRMYVEFYQNTPL 77 Query: 71 LVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 LVQ+ ++YGL + F +F+ + + L +AYI+E+IRS I ++PKGQ +A+ + Sbjct: 78 LVQVVFMYYGLAIMSKGFIMPSAFMTTVCCVGLYHAAYIAEVIRSGIEAVPKGQTEAALS 137 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G TR QT+ II+PQ + T PL+++ ++++K+TS+ + I+ ++ TA+ T Sbjct: 138 QGFTRLQTMSLIIIPQAVRTILPPLTNQVVNLIKNTSIVAIISGADLMFTAKVWAYDTTY 197 Query: 188 PLIIYCELAFVYLILTSFCYIIQI--KIESSVTQHTYSV 224 + + AF+Y IL C+ I I + + + TYS+ Sbjct: 198 YVPAFAGAAFLYFIL---CFPIAIFGRRQEERNKETYSL 233 >gi|224369137|ref|YP_002603301.1| GlnP4 [Desulfobacterium autotrophicum HRM2] gi|223691854|gb|ACN15137.1| GlnP4 [Desulfobacterium autotrophicum HRM2] Length = 213 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 57/189 (30%), Positives = 105/189 (55%), Gaps = 2/189 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L + VTL + I+ + IG +AV+R++ T + I Y + R P++V + Sbjct: 9 QFLLPGLGVTLCVTLIALFMGCCIGAIMAVLRVYGGVTART-IATSYSIVVRAIPVVVII 67 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F++++ + + F++ ++L AY +EI R +I+S+P+GQ A+ IG+ R + Sbjct: 68 FILYFVVSEF-VDLSPFMSGALALGFASGAYQTEIFRGAILSVPQGQMTAARGIGMGRAK 126 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 IR II+PQ + + L +E +LK +S+ I +PE+ + AQ ++T +PL+ + Sbjct: 127 AIRCIIMPQAMRIAIPSLINEVSLVLKDSSLVFVIGVPELLRRAQYASASTMEPLLAFGT 186 Query: 195 LAFVYLILT 203 A Y++LT Sbjct: 187 AALFYILLT 195 >gi|111021335|ref|YP_704307.1| ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] gi|110820865|gb|ABG96149.1| ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] Length = 243 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 85/150 (56%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRGT LLVQLF +FY +P G + D + I++L LN+ AY +E++R +I S+P+ QW+A Sbjct: 62 FRGTSLLVQLFWLFYVVPLFGYLLDPVLCGILALGLNYGAYGAEVVRGAINSVPQSQWEA 121 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+ + Q +R ++ PQ PL++ I +LK T++AS I + ++ ++ T Sbjct: 122 ATALDFSHWQRLRRVVFPQAWAEMIPPLTNLLIQLLKGTALASYILLQDLTFEIDQLRQT 181 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 T L + +Y ++ ++ +E Sbjct: 182 TGNTLFAFGVGLVIYFVIGYVLTLVMNALE 211 >gi|29832824|ref|NP_827458.1| glutamine ABC transporter permease protein [Streptomyces avermitilis MA-4680] gi|29609945|dbj|BAC73993.1| putative polar amino acid ABC transporter permease protein [Streptomyces avermitilis MA-4680] Length = 317 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 114/222 (51%), Gaps = 19/222 (8%) Query: 11 DSFPQLLYAA-IVVTLPIACISFVISLIIGFFIAVIR-----IFFSDTIISLIMHFYVWI 64 ++ P++L + V L + C + V L++G IA+ R +FF + + Y Sbjct: 98 EALPKVLEGLWLNVRLLLVCGAAV--LVLGMLIAIARTLRGPVFFP---LRALAAAYTDF 152 Query: 65 FRGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 FRG PL++ L ++ G+P + G+ D + +LTL +SAY++E+ R+ I S+ Q Sbjct: 153 FRGLPLIINLMIVVLGVPALRLQGVTVDPVLLGGTALTLTYSAYVAEVFRAGIESVHPSQ 212 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 A+ ++GLT +Q +RH++LPQ + PL ++ +S+ K T + S + + A I Sbjct: 213 RAAARSLGLTNRQALRHVVLPQAVRRQVPPLLNDLVSLQKDTGLVSIGGAVDAVRAADII 272 Query: 182 V--STTYQPLIIYCELAFVYLI--LTSFCYIIQIKIESSVTQ 219 V S Y P I+ L FV L +T F + +++ Q Sbjct: 273 VGRSLNYTPYIV-AGLLFVALTIPMTRFTDWVTARMDRQRAQ 313 >gi|17549795|ref|NP_523135.1| amino-acid transmembrane ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17432050|emb|CAD18727.1| probable amino-acid transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 226 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 50/142 (35%), Positives = 82/142 (57%), Gaps = 2/142 (1%) Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTP L+ + + +Y +P + G+ A I +L N SAY+ EI+R ++ S+P Q A Sbjct: 66 RGTPALIHMLLAYYVVPPLLGLSISPLAAGIGALACNTSAYLVEILRGALSSVPDAQRAA 125 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ Q RH++LPQ + PL+SEF +LK++S+ S I +PE+ A+ Sbjct: 126 AQALGMREPQVWRHVLLPQVFYRAIPPLTSEFTILLKASSLMSIIAVPELATVARNASLQ 185 Query: 185 TYQPLIIYCELAFVYLILTSFC 206 + PL ++ A VY ++ FC Sbjct: 186 SDLPLQVFAMTAAVYFVIL-FC 206 >gi|226363678|ref|YP_002781460.1| ABC transporter permease protein [Rhodococcus opacus B4] gi|226242167|dbj|BAH52515.1| putative ABC transporter permease protein [Rhodococcus opacus B4] Length = 243 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 53/147 (36%), Positives = 86/147 (58%), Gaps = 7/147 (4%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRGT LLVQLF +FY +P G + D + I++L LN+ AY +E++R +I S+P+ QW+A Sbjct: 62 FRGTSLLVQLFWLFYVVPLFGYLIDPVLCGILALGLNYGAYGAEVVRGAINSVPQSQWEA 121 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP----EIFQTAQR 180 + A+ + Q +R ++ PQ PL++ I +LK T++AS I + EI Q Q Sbjct: 122 ATALDFSHWQRLRRVVFPQAWAEMIPPLTNLLIQLLKGTALASYILLQDLTFEIDQLRQT 181 Query: 181 IVSTTYQ---PLIIYCELAFVYLILTS 204 +T + L+IY + +V +L + Sbjct: 182 TGNTLFAFGVGLVIYFVIGYVLTLLMN 208 >gi|209552184|ref|YP_002284100.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539777|gb|ACI59708.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 217 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 89/156 (57%), Gaps = 10/156 (6%) Query: 49 FSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISE 108 F+ T IS++ RG P + LF+IFYGLP +G+ F S A ++ LT+ +AYI+E Sbjct: 50 FASTFISVV--------RGVPPITWLFLIFYGLPQLGLKFSSLSAAVVGLTMMCTAYIAE 101 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS-SEFISILKSTSVAS 167 RS +++P GQ +A+ A+GLT R +I PQ +P++ + FI++LK+++V S Sbjct: 102 FYRSGWLAMPAGQIEAAKALGLTEFAAFRKVIAPQVFVI-VLPMAITYFIALLKNSAVVS 160 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I + ++ A + P ++ FVY+ ++ Sbjct: 161 VIGVSDVTDRALSESRSAPDPFNVFIAAGFVYMAVS 196 >gi|168229728|ref|ZP_02654786.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194473000|ref|ZP_03078984.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197249262|ref|YP_002147313.1| histidine ABC transporter permease HisQ [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|194459364|gb|EDX48203.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197212965|gb|ACH50362.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205335765|gb|EDZ22529.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 228 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V++++IG A ++ + I LI Y + RG P L Sbjct: 4 GFSGVILQGAIVTLELALSSVVLAVLIGLVGAGAKLS-QNRITGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP-HIGIVFDSF----------VAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL + +V DS VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNVVTDSLGIDQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G T QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTHGQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T++P +YL+ T+ + + +E + D Sbjct: 183 AGKSTWEPFYFAVVCGLIYLVFTTVSNGVLLLLERRYSVGVKRAD 227 >gi|17546977|ref|NP_520379.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum GMI1000] gi|17429278|emb|CAD15965.1| probable amino acid transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 231 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 61/227 (26%), Positives = 123/227 (54%), Gaps = 17/227 (7%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ + Q L +++ + ++FV++L + +A++R+ + + + + YV R Sbjct: 9 LLSGQYHQWLVTGFQLSIKLTALAFVLALPLAIAVALLRLAPAAPLRA-VGQAYVEAIRN 67 Query: 68 TPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 PLL + ++G P + + +++ A+I +L L +AY++E IRS + SI Sbjct: 68 VPLLAHMLFWYFGAPQLLPMSVKTWLYNLNYEAASAVI-ALVLYTAAYMAEDIRSGLRSI 126 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PK Q++AS A+GL+ Q +R ++LPQ++ + PL S+ +++ K++S+A I + E+ Sbjct: 127 PKEQFEASRALGLSFLQAMRLVVLPQSLRVTVPPLVSQTLNLWKNSSIAMVIGVAELMYQ 186 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 AQ++ S T++ + YL ++ + I + S+ QH Y V Sbjct: 187 AQQVESATFRGFEAFAFATAAYLSIS-----MAITVFSAWYQHRYPV 228 >gi|333028102|ref|ZP_08456166.1| putative ABC transporter permease [Streptomyces sp. Tu6071] gi|332747954|gb|EGJ78395.1| putative ABC transporter permease [Streptomyces sp. Tu6071] Length = 268 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 114/216 (52%), Gaps = 23/216 (10%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF- 78 + +TL + + V+ ++G +A+ R+ S+ +++ + Y+W FR TP+LVQL F Sbjct: 47 GLGLTLWLTALVMVLGFVLGTLLALGRMS-SNPVLNWVSSGYIWFFRSTPILVQLLFWFN 105 Query: 79 ----YGLPHIGIVFD-SFVAI------------IISLTLNFSAYISEIIRSSIISIPKGQ 121 Y +GI F FV + ++ LTL+ +AY +E++R ++S+ +GQ Sbjct: 106 IGALYPQLGLGIPFGPEFVTVKTVNLLGPVTVAVLGLTLHEAAYAAEVVRGGLLSVDRGQ 165 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++GL+ + +R I+LPQ + P + I LK TS+ S I + ++ + Q + Sbjct: 166 IEAAQSLGLSPWRRLRRIVLPQAMRAIVPPAGNMLIGALKGTSIVSVIAVQDLLYSVQLV 225 Query: 182 VSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIES 215 TYQ PL++ + Y ++TS + Q +E Sbjct: 226 YHRTYQVIPLLLVATIW--YALVTSVLSVGQHYVEK 259 >gi|330719318|ref|ZP_08313918.1| glutamine ABC transporter, substrate binding and permease protein [Leuconostoc fallax KCTC 3537] Length = 482 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 105/185 (56%), Gaps = 4/185 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMHFYVWIFRGTPLLVQLFVIF 78 ++ T+ + ++ +++ I G F+ ++ I S+T + + ++IFRG PL+V F I+ Sbjct: 283 GLIETIKLTVLAIILASIWGIFLGILGI--SETKWLRGVSTTVIYIFRGLPLMVLAFFIY 340 Query: 79 YGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 GLP IG +F+A II+L LN AY + +R ++ KGQ +A+ ++GL + +R Sbjct: 341 IGLPTVIGTKVPAFLAGIITLVLNEGAYTAAFVRGGFEAVEKGQMEAARSLGLPYGKAMR 400 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 +I+PQ + ++FI LK TS+ S I + E+ QT IV+ Q ++ +A Sbjct: 401 KVIVPQGLRIMVPSFINQFIITLKDTSILSAIGLLELTQTGTLIVARNSQGFRVWAIIAV 460 Query: 198 VYLIL 202 +YLI+ Sbjct: 461 MYLIV 465 >gi|326793192|ref|YP_004311013.1| polar amino acid ABC transporter inner membrane protein [Clostridium lentocellum DSM 5427] gi|326543956|gb|ADZ85815.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium lentocellum DSM 5427] Length = 224 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 100/167 (59%), Gaps = 2/167 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 PQ++ + VTL + ++ + ++ +G +AV R+ ++ IM FY+ + RGTPLL+ Sbjct: 19 LPQMM-EGLGVTLQVFALTLIFAIPLGILVAVCRLS-RFKVLRKIMEFYILLMRGTPLLL 76 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 Q+ IF+G P + I A +++ +LN++AY +EI R+ I SI +GQ++ + +GL++ Sbjct: 77 QIIFIFFGFPILNIAIPRMPAALLAFSLNYAAYFAEIFRAGISSIDQGQYEGAEVLGLSK 136 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 + T IILPQ P+++E I+++K T++ + ++ + + Sbjct: 137 QDTFFRIILPQAFKRVLPPIANEVITLVKDTALVYAVGFDDLLKIGK 183 >gi|302560483|ref|ZP_07312825.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces griseoflavus Tu4000] gi|302478101|gb|EFL41194.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces griseoflavus Tu4000] Length = 216 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 57/190 (30%), Positives = 98/190 (51%), Gaps = 9/190 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI---ISLI 57 MK++W + F + ++VTL I + +IS +G A++ + + + + Sbjct: 1 MKWDWSA--VSDFMPYFWDGLLVTLQILVLGSLISFALGLVWALLMRVPTRWVTWPVGAV 58 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 F R TPLLVQLF +FY LP GI F + + ++ L++S Y ++ R+ I ++ Sbjct: 59 TEF----VRNTPLLVQLFFLFYVLPEWGITFSALTTGVFAIGLHYSTYTMQVYRAGIEAV 114 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQW+A+ A+ L ++T +ILPQ + L + IS+LK T + IT+ E+ Sbjct: 115 PVGQWEAATALNLPLRRTWTAVILPQAVRRVVPALGNYVISMLKDTPLLMAITVLEMLGE 174 Query: 178 AQRIVSTTYQ 187 A+ +Q Sbjct: 175 ARLFSQQNFQ 184 >gi|126463864|ref|YP_001044977.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17029] gi|126105675|gb|ABN78205.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17029] Length = 221 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 48/123 (39%), Positives = 71/123 (57%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 R P LV L I+ GLP G+ F A+ ++ LN SAY +EI R+ I S+P GQ +A Sbjct: 68 LRALPPLVLLIFIYSGLPFAGLAISPFAAVAVAFFLNNSAYYAEIYRAGIQSVPAGQTEA 127 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A GLT QT+ H++LPQ + L S + ++K TS+AS +++ E+ +A S Sbjct: 128 ARACGLTTGQTLAHVVLPQAVRNVLPDLLSNTVEVVKLTSLASVVSLAELLYSANMARSL 187 Query: 185 TYQ 187 TY Sbjct: 188 TYN 190 >gi|330719149|ref|ZP_08313749.1| L-cystine permease [Leuconostoc fallax KCTC 3537] Length = 248 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 110/192 (57%), Gaps = 23/192 (11%) Query: 14 PQLLY-------AAIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLIMHFYV 62 PQL++ +A+ VTL + +S +I +I+G IA +R+ FF I + Sbjct: 7 PQLIWQYLPDILSALPVTLLLTIVSTLIGVIVGAGIAFVRMEDTPFFKQVAI-----VFT 61 Query: 63 WIFRGTPLLVQLFVIFYGLP----HIGIVFDSFVAII---ISLTLNFSAYISEIIRSSII 115 RGTP+L+Q+F+++YGLP +IG+ D+ +I I+ LN +A++SEIIR+++ Sbjct: 62 SFIRGTPILIQMFLVYYGLPFLLNYIGVNTDNVNPLIYLFITYGLNMAAFLSEIIRAALE 121 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+P Q +A+ G T++Q II PQ + + ++ IS+L+ TS+A TI + ++ Sbjct: 122 SVPATQREAALTSGYTKRQMYMKIIFPQAMVIAIPSFATMVISLLQDTSLAFTIGVLDVV 181 Query: 176 QTAQRIVSTTYQ 187 A+ + + T+ Sbjct: 182 GKAKALGTATFH 193 >gi|237801379|ref|ZP_04589840.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806662|ref|ZP_04593366.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024238|gb|EGI04295.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027776|gb|EGI07831.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 225 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 107/191 (56%), Gaps = 8/191 (4%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLL 71 QL + ++V TL I + ++ L++ IA++R+ + I ++ F YV + RG L Sbjct: 17 QLAHGSLV-TLQITFFAELLVLMLSLMIALMRL----SPIRVLRWFATIYVEVLRGISAL 71 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 V LF +F+ LP G+ ++ L L FSAY SEIIRS++I++ KGQ DA A+ Sbjct: 72 VLLFYLFFILPLFGVRLSPMTTGVLGLGLTFSAYGSEIIRSALINVSKGQRDALRALDFG 131 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 R IILPQ + P+ ++ + +LK+TS+ S IT+ ++ T ++V+T Q +I Sbjct: 132 PVNAFRRIILPQALPFMIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQLVTTLGQQTLI 191 Query: 192 YCELAFVYLIL 202 + + Y ++ Sbjct: 192 WSIVLICYFVM 202 >gi|227551337|ref|ZP_03981386.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] gi|257896043|ref|ZP_05675696.1| amino acid ABC transporter [Enterococcus faecium Com12] gi|293378785|ref|ZP_06624942.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] gi|227179548|gb|EEI60520.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] gi|257832608|gb|EEV59029.1| amino acid ABC transporter [Enterococcus faecium Com12] gi|292642578|gb|EFF60731.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] Length = 215 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 105/195 (53%), Gaps = 1/195 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I ++ + +TL + ++ V SLIIG +A+ ++ + I+S + YV FR Sbjct: 4 LIQTYGPIFVDGFKITLFSSVLALVFSLIIGTLMAIFQLS-KNKIVSALAKAYVEFFRNI 62 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+ + + +P D F A I LT+ SA+I+E +RS I ++PKGQ +A + Sbjct: 63 PLLIIVMFFYVVVPIYWFNLDGFQAGTIGLTIYTSAFIAETVRSGIQTVPKGQTEAGLSS 122 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G T + +R+I+LPQ PL ++FI+++K++S+ + + ++ I S T+ Sbjct: 123 GFTYPEIMRYIVLPQAFKIVIPPLGNQFINLVKNSSILAIVAGLDLMYQGDLIASETFNT 182 Query: 189 LIIYCELAFVYLILT 203 Y + YL++T Sbjct: 183 FDTYIIVGLFYLVIT 197 >gi|115376859|ref|ZP_01464082.1| amino acid ABC transporter binding protein and permease protein [Stigmatella aurantiaca DW4/3-1] gi|115366162|gb|EAU65174.1| amino acid ABC transporter binding protein and permease protein [Stigmatella aurantiaca DW4/3-1] Length = 441 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 76/109 (69%), Gaps = 1/109 (0%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +S + YV + RGTP+L+QL+V+++GL + + D+F A I+ L LN++AY +E+ R+ Sbjct: 276 LSRLATAYVELLRGTPVLLQLYVLYFGLAGV-LRLDAFSAAILGLGLNYAAYEAEVYRAG 334 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 ++++P+GQ +A+ A+G+T +R +++PQ + ++++FI++LK Sbjct: 335 VLAVPRGQMEAALALGMTTPLALRRVVVPQAFRVALPGVTNDFIALLKD 383 >gi|306831519|ref|ZP_07464677.1| ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426304|gb|EFM29418.1| ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 227 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 101/182 (55%), Gaps = 1/182 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+V+T+ +A + + ++G I++I+ ++ ++S I Y+ + R TPLL+QL+ +++ Sbjct: 17 ALVLTIRLAFFGILGAFVLGLLISLIK-YYKIPVLSQICQVYIELSRNTPLLIQLYFLYF 75 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GLP IGIV S + ++ L +Y++E RS + +I K Q++ +IGL Q ++ Sbjct: 76 GLPKIGIVLSSEMCAVVGLIFLGGSYMAESFRSGLEAISKTQYEVGLSIGLKPVQNFFYV 135 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I PQ + S L + I ++K TSV S + + ++ A+ ++ Y+ L Y Sbjct: 136 IFPQALAVSLPSLVANVIFLIKETSVFSIVALADLMYVAKDLIGLYYETDEALLMLVLAY 195 Query: 200 LI 201 LI Sbjct: 196 LI 197 >gi|69246348|ref|ZP_00603904.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Enterococcus faecium DO] gi|257878164|ref|ZP_05657817.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257881052|ref|ZP_05660705.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|257884713|ref|ZP_05664366.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257889637|ref|ZP_05669290.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|257892423|ref|ZP_05672076.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] gi|257898671|ref|ZP_05678324.1| amino acid ABC transporter [Enterococcus faecium Com15] gi|258616330|ref|ZP_05714100.1| glutamine transport system permease protein [Enterococcus faecium DO] gi|260559211|ref|ZP_05831397.1| amino acid ABC transporter [Enterococcus faecium C68] gi|261207744|ref|ZP_05922429.1| amino acid ABC transporter [Enterococcus faecium TC 6] gi|289565819|ref|ZP_06446261.1| glutamine ABC transporter permease glnM [Enterococcus faecium D344SRF] gi|293554037|ref|ZP_06674637.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium E1039] gi|293563129|ref|ZP_06677594.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium E1162] gi|293569786|ref|ZP_06680873.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium E1071] gi|293572582|ref|ZP_06683556.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium E980] gi|294614007|ref|ZP_06693937.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium E1636] gi|294623309|ref|ZP_06702171.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium U0317] gi|314939890|ref|ZP_07847096.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|314943737|ref|ZP_07850476.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|314949693|ref|ZP_07853011.1| ABC transporter, permease protein [Enterococcus faecium TX0082] gi|314953239|ref|ZP_07856178.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|314993681|ref|ZP_07859029.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|314997402|ref|ZP_07862353.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|68195301|gb|EAN09752.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Enterococcus faecium DO] gi|257812392|gb|EEV41150.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257816710|gb|EEV44038.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|257820551|gb|EEV47699.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257825997|gb|EEV52623.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|257828802|gb|EEV55409.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] gi|257836583|gb|EEV61657.1| amino acid ABC transporter [Enterococcus faecium Com15] gi|260074968|gb|EEW63284.1| amino acid ABC transporter [Enterococcus faecium C68] gi|260078127|gb|EEW65833.1| amino acid ABC transporter [Enterococcus faecium TC 6] gi|289162362|gb|EFD10220.1| glutamine ABC transporter permease glnM [Enterococcus faecium D344SRF] gi|291587534|gb|EFF19411.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium E1071] gi|291593114|gb|EFF24693.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium E1636] gi|291597277|gb|EFF28466.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium U0317] gi|291601819|gb|EFF32071.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium E1039] gi|291604907|gb|EFF34376.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium E1162] gi|291607365|gb|EFF36713.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium E980] gi|313588537|gb|EFR67382.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|313591855|gb|EFR70700.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|313594705|gb|EFR73550.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|313597600|gb|EFR76445.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|313640853|gb|EFS05433.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|313643951|gb|EFS08531.1| ABC transporter, permease protein [Enterococcus faecium TX0082] Length = 215 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 105/195 (53%), Gaps = 1/195 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I ++ + +TL + ++ V SLIIG +A+ ++ + ++S + YV FR Sbjct: 4 LIQTYGPIFVDGFKITLFSSVLALVFSLIIGTLMAIFQLS-KNKVVSALAKAYVEFFRNI 62 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+ + + +P D F A I LT+ SA+I+E +RS I ++PKGQ +A + Sbjct: 63 PLLIIVMFFYVVVPIYWFNLDGFQAGTIGLTIYTSAFIAETVRSGIQTVPKGQTEAGLSS 122 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G T + +R+I+LPQ PL ++FI+++K++S+ + + ++ I S T+ Sbjct: 123 GFTYSEIMRYIVLPQAFKIVIPPLGNQFINLVKNSSILAIVAGLDLMYQGDLIASETFNT 182 Query: 189 LIIYCELAFVYLILT 203 Y + YL++T Sbjct: 183 FDTYIIVGLFYLVIT 197 >gi|255067574|ref|ZP_05319429.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria sicca ATCC 29256] gi|255048195|gb|EET43659.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria sicca ATCC 29256] Length = 248 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 62/183 (33%), Positives = 102/183 (55%), Gaps = 27/183 (14%) Query: 61 YVWIFRGTPLLVQLFVI------FYGLPHIGIV------------FDSFVAIIISLTLNF 102 YV +FRGTPL VQ+ + F+ P G++ + + +A ++L N Sbjct: 69 YVTLFRGTPLFVQIVIWSYVWFPFFVHPTDGLLINGDEAVEIRRSYGALIAGSLALIANS 128 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AYI EI R+ I SI +GQ +A+ ++GLT Q +R++ILPQ + PL+SEFI++LK Sbjct: 129 GAYICEIFRAGIQSIDRGQMEAARSLGLTYPQAMRYVILPQALRRMLPPLASEFITLLKD 188 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCE----LAFVYLILTSFCYIIQIKIESSVT 218 +S+ S I + E+ Q +S Y +Y E +A +YL++T+F + +++E+ Sbjct: 189 SSLLSVIAVAEL-AYVQSTISGRYS---VYEEPLYTVALIYLLMTTFLGWVFLRLENRYN 244 Query: 219 -QH 220 QH Sbjct: 245 PQH 247 >gi|145631224|ref|ZP_01786997.1| arginine transporter permease subunit ArtM [Haemophilus influenzae R3021] gi|144983151|gb|EDJ90646.1| arginine transporter permease subunit ArtM [Haemophilus influenzae R3021] Length = 227 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 111/197 (56%), Gaps = 15/197 (7%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 I+F ++L + F +++ + + ++ Y+ +F GTPLLVQ F+I+ G + D Sbjct: 26 IAFCLALFLTFLLSM-----ENKWVKRAVNLYLTLFTGTPLLVQFFLIYAGPGQFQWIID 80 Query: 90 SFVAIIIS---------LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 S + ++S L LN +AY +++ ++ +IPKGQW++ A+GL R QT++ I+ Sbjct: 81 SPLWYVLSNAWFCAALALALNSAAYSTQLFHGAVKAIPKGQWESCGALGLNRIQTLK-IL 139 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 +P + + +E I + K T++ASTITI +I A+++ T Y + IY +YL Sbjct: 140 IPYALKRALPSYGNEIILVFKGTALASTITIMDIMGYARQLYGTEYDAITIYGIAGGIYL 199 Query: 201 ILTSFCYIIQIKIESSV 217 I+T ++ K+E+ V Sbjct: 200 IITGIATLLLRKLETKV 216 >gi|27379575|ref|NP_771104.1| ABC transporter permease ATP-binding protein [Bradyrhizobium japonicum USDA 110] gi|27352727|dbj|BAC49729.1| blr4464 [Bradyrhizobium japonicum USDA 110] Length = 540 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 51/162 (31%), Positives = 97/162 (59%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +++ I Y IFRGTPL++Q+ + LPHIGI + +A ++L N + +I+E++R+ Sbjct: 48 LLAAIARAYTVIFRGTPLILQMVFAYDALPHIGIKLPAVLAAGLALACNEAPFIAEMLRA 107 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 ++ + +GQ A A+G+T + + +I PQ I T +E +S LK++S+AS + + Sbjct: 108 GVLGVDRGQVTAGQALGMTPRILMWRVIAPQAIRTMIPAFGNEAVSALKNSSLASVVAVQ 167 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 E+ + ++ S+T+ I+ +YL+LT+ +IQ+ +E Sbjct: 168 ELTLRSTQLASSTFDFFSIFFASGLLYLVLTATISVIQLFVE 209 >gi|293395143|ref|ZP_06639429.1| histidine ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] gi|291422320|gb|EFE95563.1| histidine ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] Length = 228 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 107/207 (51%), Gaps = 12/207 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ + QL++ +VTL +A S +++++IG A ++ + +I+ + Y + RG Sbjct: 1 MLQGYSQLIFEGALVTLELALSSVLLAVVIGLIGAGGKLS-HNRVIASVFGAYTTLIRGV 59 Query: 69 PLLVQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISI 117 P LV + +IFYGL +G+ D A II+L + AY +E R + +++ Sbjct: 60 PDLVLMLLIFYGLQIALNGVTEALGVAQFDIDPLSAGIITLGFIYGAYFTETFRGAYMAV 119 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P+GQ +A+ A G + QT R I+ P + + + + + ILK+T++ S + + ++ + Sbjct: 120 PRGQIEAATAFGFSGGQTFRRILFPAMMRFALPGIGNNWQVILKATALVSILGLNDVVKA 179 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTS 204 Q TYQP VYLI T+ Sbjct: 180 TQLAGKGTYQPFFYAIVAGAVYLIFTT 206 >gi|222152718|ref|YP_002561894.1| amino acid ABC transporter permease [Streptococcus uberis 0140J] gi|222113530|emb|CAR41316.1| putative amino acid ABC transporter, permease protein [Streptococcus uberis 0140J] Length = 233 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 100/176 (56%), Gaps = 8/176 (4%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEII 110 + I YV +++ TPLLVQ ++YGL I I+ +F ++ + + AYI+E+I Sbjct: 61 LKAIARVYVELYQNTPLLVQFVFVYYGLAIISNGLIMISTFFTAVLCVGIYHGAYIAEVI 120 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 RS I ++PKGQ +A+ + G T +QT+ I+LPQ + T P++++ ++++K+TSV + I+ Sbjct: 121 RSGIEAVPKGQIEAALSQGFTYEQTMSLIVLPQAVRTILPPMTNQVVNLIKNTSVVAIIS 180 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ--IKIESSVTQHTYSV 224 +I TA+ T + + A +Y IL CY + + + + TYSV Sbjct: 181 GADIMFTAKAWAYETTNYVPAFAGAAILYFIL---CYPLANWARRKEEANKKTYSV 233 >gi|157146482|ref|YP_001453801.1| arginine transporter permease subunit ArtM [Citrobacter koseri ATCC BAA-895] gi|157083687|gb|ABV13365.1| hypothetical protein CKO_02242 [Citrobacter koseri ATCC BAA-895] Length = 222 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 120/218 (55%), Gaps = 14/218 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + + P+L+ + +L + S +++LI+ +I + ++ L+ Y+ +F GT Sbjct: 1 MFEYLPELM-KGLHTSLTLTVASIIVALILALIFTIILTLKTPVLVWLV-RGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +++L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPSLQDYPVLWHLLSEPWLCALLALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW + A+G+++K T+ I+LP + S+E + + KSTS+A TIT+ E+ Sbjct: 119 EGQWQSCGALGMSKKDTL-AILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHG 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 Q + TY ++++ +YLI+ ++ IE Sbjct: 178 QLLYGRTYD-VMVFGAAGVIYLIVNGLLTLLMRLIERK 214 >gi|85704884|ref|ZP_01035985.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius sp. 217] gi|85670702|gb|EAQ25562.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius sp. 217] Length = 239 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 63/240 (26%), Positives = 124/240 (51%), Gaps = 17/240 (7%) Query: 1 MKYEWFNLIIDSFPQ---LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI 57 M Y W N + P+ L + + T+ +A ++VI++++G + V R + ++S + Sbjct: 1 MNYNW-NWSVLWEPEYFGWLLSGLGWTVSVALCAWVIAMVVGSLVGVGRTL-PNKVVSTV 58 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI-----------GIVFDSFVAIIISLTLNFSAYI 106 YV +FR PLLVQ+F+ ++ +P + + FV +++L L ++ + Sbjct: 59 CTAYVELFRNVPLLVQMFIWYFAVPEMLPEDAGRWMKREMPQPEFVTAVVALGLYTASRV 118 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +E +R+ I ++P G A+ A G+ Q R+++LP + P++SEF+++ K++S+A Sbjct: 119 AEQVRAGIEAVPTGLKSAATAQGMRVSQVYRYVLLPISFRLIVPPMTSEFLTVFKNSSLA 178 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 TI + E+ +Q+I T+Q Y +Y +L + C I + + T+ V K Sbjct: 179 LTIGLLELTAQSQQIAEYTFQSFEAYTAATIIY-VLIALCATIVMTVLERYTRIPGYVGK 237 >gi|256391966|ref|YP_003113530.1| polar amino acid ABC transporter inner membrane subunit [Catenulispora acidiphila DSM 44928] gi|256358192|gb|ACU71689.1| polar amino acid ABC transporter, inner membrane subunit [Catenulispora acidiphila DSM 44928] Length = 258 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 89/149 (59%), Gaps = 5/149 (3%) Query: 36 LIIGFFIAVIRIFFSDTII--SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI---GIVFDS 90 LI+G +A+IR S ++ L Y +FRG P L+ + V+ +G+P + G D Sbjct: 63 LILGLGVALIRTTKSPGLLPFRLTATLYADVFRGVPTLLLILVVGFGIPALQLSGTPKDP 122 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 V +++LTL++ AY+SE+ R+ + S+ Q A+ A+GL+ +QT+R ++LPQ I Sbjct: 123 VVLGVVALTLSYVAYVSEVFRAGLDSVHPSQRAAATALGLSERQTLRFVVLPQAIRNVVP 182 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQ 179 PL ++F ++ K T++ ST+ + E + AQ Sbjct: 183 PLLNDFSALQKDTALVSTLGVVESLRQAQ 211 >gi|196248813|ref|ZP_03147513.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. G11MC16] gi|196211689|gb|EDY06448.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. G11MC16] Length = 206 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 48/124 (38%), Positives = 77/124 (62%), Gaps = 8/124 (6%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIG--------IVFDSFVAIIISLTLNFSAYISEII 110 + YV FRGT L+VQLF ++Y LP + + SF A +I+++LN+ AY+SE + Sbjct: 33 NIYVEFFRGTSLVVQLFWVYYALPMLAKAIPFLPPLNLSSFWAGVIAVSLNYGAYVSETV 92 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 RS I+++ +GQ +A+ A+ +TR Q +R +ILPQ + + I +LKSTS+ S I Sbjct: 93 RSCILAVDRGQHEAAIALNMTRFQRMRLVILPQAVRMMLPDFGNNLIQMLKSTSLVSLIG 152 Query: 171 IPEI 174 + +I Sbjct: 153 LTDI 156 >gi|220924347|ref|YP_002499649.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium nodulans ORS 2060] gi|219948954|gb|ACL59346.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 240 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 114/221 (51%), Gaps = 19/221 (8%) Query: 1 MKYEW-FNLIIDSFPQ-------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT 52 M Y W +++ D P+ +L + +V T+ A +++I+ +G I V+R + Sbjct: 1 MNYNWNWSIFFDLSPEGTGTYADMLLSGLVWTIVTALCAWIIAFAVGSVIGVMRTL-PNR 59 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDS-----FVAIIISLTLNF 102 + YV +FR PLLVQ+F+ F+ LP + G F ++ L Sbjct: 60 AAQAFGNGYVEVFRNIPLLVQMFLWFFVLPELLPQDWGTWLKQLPDAPFYTAVVCLGFFT 119 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 ++ ++E +R+ I S+P+GQ A A+GLT QT R+++LP PL+SEF++ LK+ Sbjct: 120 ASRVAEQVRAGIQSLPRGQRMAGTALGLTTGQTYRYVLLPNAYRIILPPLTSEFLNNLKN 179 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 TSVA TI + E+ A+ + ++Q + +Y+I+ Sbjct: 180 TSVALTIGLLELTARARSMQEFSFQVFEAFTAATILYIIIN 220 >gi|22536880|ref|NP_687731.1| amino acid ABC transporter permease [Streptococcus agalactiae 2603V/R] gi|76787176|ref|YP_329464.1| polar amino acid ABC transporter permease [Streptococcus agalactiae A909] gi|76798197|ref|ZP_00780448.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 18RS21] gi|22533730|gb|AAM99603.1|AE014224_6 amino acid ABC transporter, permease protein [Streptococcus agalactiae 2603V/R] gi|76562233|gb|ABA44817.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus agalactiae A909] gi|76586460|gb|EAO62967.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 18RS21] Length = 231 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 98/174 (56%), Gaps = 8/174 (4%) Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIR 111 LI YV +F+ TPLLVQ+ ++YGL I ++ +F ++ + L AYISE+IR Sbjct: 61 KLISRIYVEVFQNTPLLVQMVFVYYGLAIISNGHVMISAFFTAVLCVGLYHGAYISEVIR 120 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S I ++PKGQ +A+ A G T QT++ IILPQ + T P++++ ++++K+TS + I+ Sbjct: 121 SGIEAVPKGQTEAALAQGFTANQTMQLIILPQAVRTILPPMTNQVVNLIKNTSTVAIISG 180 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ--IKIESSVTQHTYS 223 +I A+ T + + A Y ++ C+ + + + + + TYS Sbjct: 181 ADIMFVAKAWAYDTTNYIPAFAGAAIFYFVI---CFPLASWARKQEELNKKTYS 231 >gi|332969079|gb|EGK08118.1| arginine ABC superfamily ATP binding cassette transporter, membrane protein [Psychrobacter sp. 1501(2011)] Length = 246 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 13/206 (6%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + F LL + ++T+ +A S I L++G A ++ I + Y RG P Sbjct: 4 LQGFGHLLLSGSLITVKLALSSLAIGLVLGLLGATAKLS-KIWIFRKLATVYTATMRGIP 62 Query: 70 LLVQLFVIFYG--------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 L+ + ++YG L + G + F+A +++L++ F AY +E+ R +I I Sbjct: 63 ELLLVLFLYYGGSMLIMAVLQNFGYNDYVEVSPFLAGVLALSIAFGAYATEVFRMAIQEI 122 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKGQW+++ A+G+ Q II+PQ + L + F+ +LK T++ S + + +I Sbjct: 123 PKGQWESAEALGMKPMQVYFRIIVPQVWRLALPGLGNLFLVLLKDTALVSVVGLKDIMYH 182 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 A R T Q Y AF+YL LT Sbjct: 183 AARGAQATQQAFTFYMAAAFIYLGLT 208 >gi|319744752|gb|EFV97094.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus agalactiae ATCC 13813] Length = 231 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 57/174 (32%), Positives = 98/174 (56%), Gaps = 8/174 (4%) Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIR 111 LI YV +F+ TPLLVQ+ ++YGL I I+ +F ++ + L AYISE+IR Sbjct: 61 KLISRIYVEVFQNTPLLVQMVFVYYGLAIISNGHIMISAFFTAVLCVGLYHGAYISEVIR 120 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S I ++PKGQ +A+ A G T QT++ IILPQ + T P++++ ++++K+TS + I+ Sbjct: 121 SGIEAVPKGQTEAALAQGFTANQTMQLIILPQAVRTILPPMTNQVVNLIKNTSTVAIISG 180 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ--IKIESSVTQHTYS 223 +I A+ T + + A Y ++ C+ + + + + + TYS Sbjct: 181 ADIMFVAKAWAYDTTNYIPAFTGAAIFYFVI---CFPLASWARKQEELNKKTYS 231 >gi|170748674|ref|YP_001754934.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium radiotolerans JCM 2831] gi|170655196|gb|ACB24251.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium radiotolerans JCM 2831] Length = 240 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 66/221 (29%), Positives = 114/221 (51%), Gaps = 19/221 (8%) Query: 1 MKYEW-FNLIIDSFPQ-------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT 52 M Y W + + D+ P+ +L + ++ T+ A S+VI+ +G I V+R S Sbjct: 1 MNYNWNWRIFFDASPEGNGTYLDMLLSGLMWTITTALCSWVIAFFLGSLIGVLRTLPSKP 60 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPH-----IGIVFDS-----FVAIIISLTLNF 102 + I YV +FR PLLVQ+F+ ++ LP IG F ++ L Sbjct: 61 A-NAIGTAYVELFRNVPLLVQMFLWYFVLPEVVPTRIGDAIKQLPDAPFYTAVVCLGFFT 119 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 ++ ++E +R+ I S+P+GQ A A+G T QT R+++LP P++SEF++ LK+ Sbjct: 120 ASRVAEQVRAGIQSLPRGQRMAGTAMGFTTYQTYRYVLLPNAYRIILPPMTSEFLNNLKN 179 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 TSVA TI + E+ A+ + ++Q + +Y+I+ Sbjct: 180 TSVALTIGLLELTARARSMQEFSFQVFEAFTAATILYVIIN 220 >gi|138895922|ref|YP_001126375.1| amino acid ABC transporter permease [Geobacillus thermodenitrificans NG80-2] gi|134267435|gb|ABO67630.1| Amino acid ABC transporter (permease) [Geobacillus thermodenitrificans NG80-2] Length = 206 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 48/124 (38%), Positives = 77/124 (62%), Gaps = 8/124 (6%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIG--------IVFDSFVAIIISLTLNFSAYISEII 110 + YV FRGT L+VQLF ++Y LP + + SF A +I+++LN+ AY+SE + Sbjct: 33 NIYVEFFRGTSLVVQLFWVYYALPMLAKAIPFLPPLNLSSFWAGVIAVSLNYGAYVSETV 92 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 RS I+++ +GQ +A+ A+ +TR Q +R +ILPQ + + I +LKSTS+ S I Sbjct: 93 RSCILAVDRGQHEAAIALNMTRFQRMRLVILPQAVRMMLPDFGNNLIQMLKSTSLVSLIG 152 Query: 171 IPEI 174 + +I Sbjct: 153 LTDI 156 >gi|16801503|ref|NP_471771.1| hypothetical protein lin2441 [Listeria innocua Clip11262] gi|16414963|emb|CAC97668.1| lin2441 [Listeria innocua Clip11262] Length = 235 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 113/219 (51%), Gaps = 20/219 (9%) Query: 20 AIVVTLPIACISFVISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 A++ T+P+ ++ GF IA+ IR++ + I FYV FR TP ++ + Sbjct: 14 AMLKTIPLTLAMTFFPILFGFIIAILLTLIRMYHVR-FLEPIAKFYVSFFRSTPAILHIM 72 Query: 76 VIFYGLPHIGIVFDS--------------FVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 +I+ G+P I + F S V +II+L+ AY++EI+RS II++ GQ Sbjct: 73 LIYLGIPLI-VDFLSKSLDLSISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQ 131 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+Y++G T Q IR ++LPQ TS ++ I L +TS+A+ + +PEI A + Sbjct: 132 MEAAYSMGYTHGQAIRKVLLPQAFMTSLPNFTNLCIGFLHTTSIAAIVAVPEITGMATIV 191 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S Y L + A +Y LT I +E ++ ++ Sbjct: 192 ASDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKY 230 >gi|299066139|emb|CBJ37322.1| putative amino acid transmembrane abc transporter protein [Ralstonia solanacearum CMR15] Length = 231 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 62/227 (27%), Positives = 123/227 (54%), Gaps = 17/227 (7%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ + Q L +++ + ++FV++L + +A++R+ + + + I YV R Sbjct: 9 LLSGQYHQWLVTGFQLSIKLTALAFVLALPLAIAVALLRLAPAAPLRA-IGQTYVEAIRN 67 Query: 68 TPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 PLL + ++G P + + +++ A+I +L L +AY++E IRS + SI Sbjct: 68 VPLLAHMLFWYFGAPQLLPMSVKTWLYNLNYEAASAVI-ALVLYTAAYMAEDIRSGLRSI 126 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PK Q++AS A+GL+ Q +R ++LPQ++ + PL S+ +++ K++S+A I + E+ Sbjct: 127 PKEQFEASRALGLSFLQAMRLVVLPQSLRVTVPPLVSQTLNLWKNSSIAMVIGVAELMYQ 186 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 AQ++ S T++ + YL ++ + I + S+ QH Y V Sbjct: 187 AQQVESATFRGFEAFAFATAAYLSIS-----MAITVFSAWYQHRYPV 228 >gi|134093509|ref|YP_001098584.1| glutamate/aspartate ABC transporter permease [Herminiimonas arsenicoxydans] gi|133737412|emb|CAL60455.1| Glutamate/aspartate transport system permease protein gltJ [Herminiimonas arsenicoxydans] Length = 243 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 62/217 (28%), Positives = 112/217 (51%), Gaps = 12/217 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 ++ +L + + TL +A +++ + ++G I + R ++ L YV +FR PL Sbjct: 15 GTWGYMLLSGLGWTLAVAFFAWIFAFVLGSLIGIARTTEKRWLVGL-GGAYVELFRNIPL 73 Query: 71 LVQLFVIFYGLPHIG-------IVFD----SFVAIIISLTLNFSAYISEIIRSSIISIPK 119 LVQ FV ++ +P + I D FV II L S+ I+E +RS I S+P+ Sbjct: 74 LVQFFVWYFVIPGLVPAVKTWVITLDPTIHQFVTAIICLGFFTSSRIAEQVRSGIQSLPR 133 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A YA+GLT QT R ++LP PL+SE ++++K+T+VA +I + E+F + Sbjct: 134 GQRNAGYALGLTGMQTYRFVLLPMAYRIIIPPLTSELMNLIKNTAVAYSIGLVELFFRTR 193 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 + T++ + +Y+++ + +E Sbjct: 194 EMGEMTFRYFEAFGAATLMYVVIAMLANRVMALVERR 230 >gi|83748011|ref|ZP_00945041.1| Transporter [Ralstonia solanacearum UW551] gi|207738691|ref|YP_002257084.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609] gi|83725313|gb|EAP72461.1| Transporter [Ralstonia solanacearum UW551] gi|206592059|emb|CAQ58965.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609] Length = 230 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 1/145 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V RGTP L+ L + +Y +P + G+ A I +L N SAY+ EI+R ++ S+P Sbjct: 65 WVSAIRGTPALIHLLLAYYVVPPLLGLSISPLTAGIGALACNTSAYLVEILRGALSSVPD 124 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q A+ A+G+ Q RH++LPQ + PL+SEF +LK++S+ S I +PE+ A+ Sbjct: 125 AQRAAAQALGMREPQVWRHVLLPQVFYRAIPPLTSEFTILLKASSLMSIIAVPELATVAR 184 Query: 180 RIVSTTYQPLIIYCELAFVYLILTS 204 + PL ++ A VY ++ S Sbjct: 185 NASLQSDLPLQVFAMTAAVYFVILS 209 >gi|323467039|gb|ADX70726.1| Glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus H10] Length = 213 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 99/174 (56%), Gaps = 1/174 (0%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 I+ + SLI+G F A++ + ++ Y+ IFR PLLV + + + +P + Sbjct: 25 IALIFSLILGVFFALLEVA-PTKFGKIVAKVYIAIFRNIPLLVIVMIFYLIVPRYIVKLS 83 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 F A I LTL SA+I+E +R+ I SI GQ + + + G+T Q +R++ILPQ + Sbjct: 84 GFQAGTIGLTLYTSAFIAETVRAGINSIGTGQMEGARSNGMTYTQAMRYVILPQAMKIVI 143 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++SV + + ++ AQ I +T++ + Y + YLILT Sbjct: 144 PPLGNQFVNLVKNSSVLAFVAGFDLMYQAQLIAFSTFRTIDTYVVVGLFYLILT 197 >gi|229493104|ref|ZP_04386899.1| ABC-type amino acid transport system, permease component [Rhodococcus erythropolis SK121] gi|229320134|gb|EEN85960.1| ABC-type amino acid transport system, permease component [Rhodococcus erythropolis SK121] Length = 324 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 111/216 (51%), Gaps = 23/216 (10%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 AA+ +T+ + ++ +G F+A+ R+ + ++ +I Y+W FR PL+VQL F Sbjct: 73 AALWMTIKLTLWGTILGFGLGVFLALGRLS-KNPVLQVIAWTYIWAFRSIPLIVQLLFWF 131 Query: 79 Y----------GLP--------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 G+P + V F A +I L L+ +AY +EIIRS IIS+ G Sbjct: 132 NITYLYQTLSLGIPFGPEFFTFQVSGVIGGFTAAVIGLALHQAAYSAEIIRSGIISVDHG 191 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A++++G+ R + I+LPQ + ++E I + K TS+ ST+ I E+F Q Sbjct: 192 QIEAAHSLGIPRSRQFFKIVLPQAMRAILPNAANEVIGLFKGTSIVSTMAIAELFYQVQV 251 Query: 181 IVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 I + PL++ + Y+ILT+ I Q +E Sbjct: 252 IFGRNGRVVPLLMVATI--WYIILTTLLSIGQYYVE 285 >gi|170023780|ref|YP_001720285.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|169750314|gb|ACA67832.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis YPIII] Length = 228 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 106/207 (51%), Gaps = 12/207 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D + +L++ +VTL +A S ++S++IG A ++ S+ ++S + Y + RG Sbjct: 1 MLDGYSKLIFEGALVTLELALFSVLLSVVIGLMGAGGKLS-SNRLVSGLFECYTTLIRGV 59 Query: 69 PLLVQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 P LV + +IFYGL +G I D A +I+L + AY +E R + +++ Sbjct: 60 PDLVLMLLIFYGLQITLNSITESLGFAQIDIDPLSAGVITLGFIYGAYFTETFRGAYMAV 119 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ +A+ A G T Q R I+ P + + + + + ILK+T++ S + + ++ + Sbjct: 120 SKGQIEAATAFGFTSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKA 179 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTS 204 Q TYQP +YL T+ Sbjct: 180 TQLAGKGTYQPFFFALVAGAIYLFFTT 206 >gi|119383777|ref|YP_914833.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119373544|gb|ABL69137.1| amino acid ABC transporter membrane protein 1, PAAT family [Paracoccus denitrificans PD1222] Length = 221 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 52/222 (23%), Positives = 110/222 (49%), Gaps = 3/222 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F +++D+ P L+ A ++L IA ++ + +++ +AV + +++ + Sbjct: 1 MSYNFQFGIVLDALPDLMRGA-ALSLSIAIVTMAVGIVLAMPLAVGS-WNGKGLVACLSR 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 ++ + R TP L Q++ FYGL GI ++A+ I+L N + Y++EI R + + Sbjct: 59 SWIELARNTPCLAQIYFFFYGLGAFGIFLSPWLAVGIALCFNNAGYLAEIFRGGLNGVNA 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q + ++GL R+I+ PQ + + ++FI L +TS+ + I + ++ A Sbjct: 119 NQMKGARSLGLGPVGAYRYIVFPQVFRNTFSSIGNQFIWALLNTSLGALIGLYDLSGVAM 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 S T++ + +A +Y IL + + + +H Sbjct: 179 DYQSRTFKTFEFFLAIAVIYFILAKLVLFLANRFKPGGARHA 220 >gi|297162207|gb|ADI11919.1| putative ABC transporter permease protein [Streptomyces bingchenggensis BCW-1] Length = 493 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 71/224 (31%), Positives = 109/224 (48%), Gaps = 41/224 (18%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+ VTL + S ++ +G +A +R+ S ++ + YVWIFR P++VQL F Sbjct: 237 AVGVTLQLTAYSMLLGFALGTVLAFMRLSAS-PVLRTVAWTYVWIFRSIPMIVQLVFWFN 295 Query: 80 ----------GLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 G+P G VF + A +I LTL+ +AY +EI+R ++S+ +G Sbjct: 296 LGALYRELGIGIP-FGPVFWSVSSNDLIGTIGAALIGLTLHQAAYCAEIVRGGVLSVDRG 354 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+G+ R + IR I+LPQ + SE IS+LK TSV + I E+F Sbjct: 355 QLEAAAALGIPRLRQIRRIVLPQAMRAILPTAGSEIISLLKGTSVVYVMAIGELF----- 409 Query: 181 IVSTTYQPLIIYCELAFV----------YLILTSFCYIIQIKIE 214 YQ +IY V Y+ LTS +Q +E Sbjct: 410 -----YQVKVIYGRNGMVIPLLMVATAWYVFLTSVLSAVQYYVE 448 >gi|116333810|ref|YP_795337.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus brevis ATCC 367] gi|116099157|gb|ABJ64306.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus brevis ATCC 367] Length = 492 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 102/183 (55%), Gaps = 4/183 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSD---TIISLIMHFYVWIFRGTPLLVQLFVIFYG 80 TL I S I+G +A+ R+ T + + YV RGTP++VQ+ +++G Sbjct: 294 TLIITVCSVFFGFILGVLLALARMGQGGVFRTGLRWLATAYVEFIRGTPMMVQVMFVYFG 353 Query: 81 LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 L I + + + II+++LN AY++E IR I S+ GQ +A+ ++G++ T+R++I Sbjct: 354 LGLI-VNLPALTSGIIAISLNSGAYVAEYIRGGINSVDAGQTEAARSLGMSSGATMRYVI 412 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LPQ + L +EFI+++K +S+ S I + E+ + + S TY+ + + +Y Sbjct: 413 LPQALKNIWPSLGNEFITLIKDSSIVSIIGVSELIFQSNIVRSDTYRGVAPIAVIMVLYF 472 Query: 201 ILT 203 ILT Sbjct: 473 ILT 475 >gi|300868856|ref|ZP_07113462.1| putative ABC transporter, permease protein [Oscillatoria sp. PCC 6506] gi|300333073|emb|CBN58654.1| putative ABC transporter, permease protein [Oscillatoria sp. PCC 6506] Length = 224 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 5/200 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + +T +A +S L++G A+ R + + + I YV R TP L+QLF Sbjct: 17 LIQGVFLTFQLAIVSIAGGLVLGTIGAMGRTS-GNAVFNGIAVAYVEFLRNTPFLIQLFF 75 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 F+GLP +GI S+ A +++L +NF AY +EIIR+ I SI KGQ +A A+G + Q Sbjct: 76 FFFGLPSLGIKLTSWQAAVLALAINFGAYSTEIIRAGIESIRKGQIEAGLALGFKKLQIF 135 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 RHIIL + L S+ + + TSV S I+ E+ + S T++ IY + Sbjct: 136 RHIILIPALGNVYPSLVSQIVIAILFTSVVSQISAEELTFVGNYLQSRTFRSFEIYLTIT 195 Query: 197 FVYL----ILTSFCYIIQIK 212 +Y+ + + ++IQ K Sbjct: 196 LIYVGIIWAIKAIAFLIQKK 215 >gi|257887549|ref|ZP_05667202.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257823603|gb|EEV50535.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] Length = 215 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 105/195 (53%), Gaps = 1/195 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I ++ + +TL + ++ V SLIIG +A+ ++ + ++S + YV FR Sbjct: 4 LIQTYGPIFVDGFKITLFSSVLALVFSLIIGTLMAIFQLS-KNKVVSTLAKAYVEFFRNI 62 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+ + + +P D F A I LT+ SA+I+E +RS I ++PKGQ +A + Sbjct: 63 PLLIIVMFFYVVVPIYWFNLDGFQAGTIGLTIYTSAFIAETVRSGIQTVPKGQTEAGLSS 122 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G T + +R+I+LPQ PL ++FI+++K++S+ + + ++ I S T+ Sbjct: 123 GFTYSEIMRYIVLPQAFKIVIPPLGNQFINLVKNSSILAIVAGLDLMYQGDLIASETFNT 182 Query: 189 LIIYCELAFVYLILT 203 Y + YL++T Sbjct: 183 FDTYIIVGLFYLVIT 197 >gi|6560693|gb|AAF16724.1|AF141644_1 putative integral membrane protein [Lactococcus lactis] Length = 191 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 53/148 (35%), Positives = 92/148 (62%), Gaps = 9/148 (6%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 +F ++ +++ Q+ ++VTL +A +SF++++I+G + + S I+ I YV + Sbjct: 40 FFGILQNNWEQI-GRGLLVTLELAVLSFILAMIVGIIFGLFSVAPSK-ILRTIARIYVDL 97 Query: 65 FRGTPLLVQLFVIFYGLPHIGIV-------FDSFVAIIISLTLNFSAYISEIIRSSIISI 117 R PLLV IFYG+P++ + + F A +I+LTLN SAYI+EI+RS + ++ Sbjct: 98 NRSIPLLVLTIFIFYGIPNLLQIITGHQSPLNEFTAGVIALTLNSSAYIAEIVRSGVQAV 157 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTI 145 P GQ +AS ++G+T ++R +ILPQ I Sbjct: 158 PSGQMEASRSLGVTYLTSMRKVILPQAI 185 >gi|238853886|ref|ZP_04644249.1| ABC-type amino acid transport system, permease component [Lactobacillus gasseri 202-4] gi|238833472|gb|EEQ25746.1| ABC-type amino acid transport system, permease component [Lactobacillus gasseri 202-4] Length = 212 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 100/180 (55%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + I+ SLI+G A++ + + + H Y+ IFR PLLV + + +P Sbjct: 19 TILCSLIALFFSLILGVGFALLEVA-PNKFGRAVAHVYIEIFRNIPLLVITMIFYLVVPQ 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 I SF A I LTL SA+I+E +R+ I S+ GQ + + + G+T Q +R++ILPQ Sbjct: 78 IWFKVSSFAAGTIGLTLYTSAFIAETVRAGINSVGDGQMEGARSNGMTYTQAMRYVILPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + PL ++FI+++K++SV + + ++ A I ++++ + Y + YLILT Sbjct: 138 ALKIVIPPLGNQFINLIKNSSVLAFVAGFDLMYQADVIAFSSFETINTYVVVGLFYLILT 197 >gi|163841001|ref|YP_001625406.1| ABC transporter, nucleotide binding/ATPase protein [Renibacterium salmoninarum ATCC 33209] gi|162954477|gb|ABY23992.1| ABC transporter, nucleotide binding/ATPase protein [Renibacterium salmoninarum ATCC 33209] Length = 381 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 23/220 (10%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY---- 79 TL + I+ ++GF +A++RI S ++ + Y WIFR PLLVQL + + Sbjct: 82 TLLLTVIAGSSGFVLGFLLALMRIS-SSPLLWTVSWAYTWIFRSVPLLVQLLLWYNLGYL 140 Query: 80 ------GLPHIGIVFD--------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 G+P + F+ F A ++ LTL+ +AY +EIIR I+S+ +GQ +A+ Sbjct: 141 YEKIQLGVPFGPVFFEVQTTTLISQFAAAVLGLTLHQAAYSAEIIRGGILSVDQGQLEAA 200 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G+ R + I+LPQ + +E I ++K TSV + E+F T Q + + T Sbjct: 201 AALGIPRSRRALRIVLPQALRAILPSAFNEIIGLVKGTSVVYVLAYSELFYTIQVVYNRT 260 Query: 186 YQ--PLIIYCELAFVYL--ILTSFCYIIQIKIESSVTQHT 221 Q PL++ L +V + +L+ Y I+ + T H+ Sbjct: 261 QQVIPLLLVATLWYVLITSVLSVAQYYIERRFSRGATYHS 300 >gi|229592161|ref|YP_002874280.1| putative histidine transporter permease [Pseudomonas fluorescens SBW25] gi|229364027|emb|CAY51589.1| putative histidine transport system permease protein [Pseudomonas fluorescens SBW25] Length = 232 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 54/160 (33%), Positives = 90/160 (56%), Gaps = 9/160 (5%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS---------LTLNFS 103 I++ Y ++ RGTP+LVQLF+I+YGL V +S + ++S +N S Sbjct: 50 IVNGAAWLYTYVIRGTPMLVQLFLIYYGLAQFEAVRESVLWPLLSSATFCACLAFAINTS 109 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AY +EII S+ + P G+ +A+ A+G++R + R I+LP + + S+E I +L++T Sbjct: 110 AYTAEIIAGSLKATPNGEIEAAKAMGMSRYKLYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 S+AS +T+ +I A+ + + Y P Y YL LT Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLCLT 209 >gi|116492831|ref|YP_804566.1| ABC-type amino acid transport system, permease and periplasmic component [Pediococcus pentosaceus ATCC 25745] gi|116102981|gb|ABJ68124.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Pediococcus pentosaceus ATCC 25745] Length = 483 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 94/170 (55%), Gaps = 7/170 (4%) Query: 40 FFIAVIRIFFS------DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFV 92 FF + IFF + + + ++IFRG PLLV I+ G+P+ +G +FV Sbjct: 297 FFATIFGIFFGMLGVVPNKFANGVSTTVIYIFRGLPLLVLALFIYTGVPNLVGEKIPAFV 356 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 A II+LTLN AY + ++ I ++ GQ +A+ ++GL + +R +ILPQ + Sbjct: 357 AGIITLTLNEGAYTAAFVKGGIEAVDGGQMEAARSLGLPYGKAMRRVILPQGLKIMVPSF 416 Query: 153 SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 ++FI LK TS+ S I I E+ QT + I++ + I+ +A +YL++ Sbjct: 417 INQFIITLKDTSILSIIGILELTQTGKIIIARNLEGFKIWTMVALIYLVI 466 >gi|318061946|ref|ZP_07980667.1| ABC transporter permease [Streptomyces sp. SA3_actG] gi|318078798|ref|ZP_07986130.1| ABC transporter permease [Streptomyces sp. SA3_actF] Length = 345 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 114/216 (52%), Gaps = 23/216 (10%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF- 78 + +TL + + V+ ++G +A+ R+ S+ ++S + Y+W FR TP+LVQL F Sbjct: 124 GLGLTLWLTALVMVLGFVLGTLLALGRMS-SNPVLSWVSSGYIWFFRSTPILVQLLFWFN 182 Query: 79 ----YGLPHIGIVFD-SFVAI------------IISLTLNFSAYISEIIRSSIISIPKGQ 121 Y +GI F FV + ++ LTL+ +AY +E++R ++S+ +GQ Sbjct: 183 IGALYPQLGLGIPFGPEFVTVKTVNLLGPVTVAVLGLTLHEAAYAAEVVRGGLLSVDRGQ 242 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++GL+ + +R I+LPQ + P + I LK TS+ S I + ++ + Q + Sbjct: 243 IEAAQSLGLSPWRRLRRIVLPQAMRAIVPPAGNMLIGALKGTSIVSVIAVQDLLYSVQLV 302 Query: 182 VSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIES 215 TYQ PL++ + Y ++TS + Q +E Sbjct: 303 YHRTYQVIPLLLVATI--WYALVTSVLSVGQHYVEK 336 >gi|315283401|ref|ZP_07871605.1| L-cystine transport system permease protein TcyM [Listeria marthii FSL S4-120] gi|313612950|gb|EFR86888.1| L-cystine transport system permease protein TcyM [Listeria marthii FSL S4-120] Length = 237 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 112/218 (51%), Gaps = 18/218 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 A++ T+P+ ++ GF IA+ IR++ + I FYV FR TP ++ + Sbjct: 16 AMLKTIPLTLAMTFFPILFGFIIAIGLTLIRMYHVR-FLEPIAKFYVSFFRSTPAILHIM 74 Query: 76 VIFYGLP----------HIGIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +I+ G+P +GI + V +II+L+ AY++EI+RS II++ GQ Sbjct: 75 LIYLGIPLIVDFLSKSFDLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQM 134 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+Y++G T Q IR ++LPQ + ++ I L +TS+A+ + +PEI A + Sbjct: 135 EAAYSMGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVA 194 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S Y L + A +Y LT I +E ++ ++ Sbjct: 195 SDNYAFLEAFIGAALIYWFLTMLIEAINYILEKNIAKY 232 >gi|332204630|gb|EGJ18695.1| putative ABC-type amino-acid transporter permease protein [Streptococcus pneumoniae GA47901] Length = 225 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 54/156 (34%), Positives = 92/156 (58%), Gaps = 4/156 (2%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G F + I+ +I H +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAMVLGIFFGAMSTS-KRPILRIIAHIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 FYGLP I I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHTIMIPIYWTAVLCMGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYIS 136 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R IILPQT PL+++ ++++K+TS + I+ Sbjct: 137 AMRLIILPQTFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|319796472|ref|YP_004158112.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315598935|gb|ADU40001.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 256 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 119/245 (48%), Gaps = 28/245 (11%) Query: 3 YEWFNL-IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI---------FFSDT 52 + WF I+ + L + +TL + + ++ G +A+ R+ + + Sbjct: 8 FGWFRWDILVEYKDLFWQGAWMTLRMTVVCVLLGSSWGLCLALARLAQPRHAPWTWIARF 67 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGL------PHIGIVFD------------SFVAI 94 + YV FRGTPL VQ+ +I + + P GI+ D + ++ Sbjct: 68 FLRWPATVYVSFFRGTPLFVQILLIHFAVMPVFIHPTSGILIDGELARTLKQEHGALISG 127 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 +++LTLN +AYISE+ R+ I SI +GQ+DA +IG + Q +R+++LPQ PL + Sbjct: 128 VVALTLNSAAYISEVFRAGIQSISRGQFDAGRSIGFSPAQVMRYVVLPQAFRRMLPPLGN 187 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I++LK TS+ S I + E+ A+ + + Y ++ +Y ++T + ++E Sbjct: 188 NAIALLKDTSLVSAIGLAELAYAARTVAGAYARYWEPYLAISVIYWVMTLVLTTMLRRLE 247 Query: 215 SSVTQ 219 + + Sbjct: 248 HRLAR 252 >gi|167855354|ref|ZP_02478121.1| arginine ABC transporter, permease [Haemophilus parasuis 29755] gi|167853502|gb|EDS24749.1| arginine ABC transporter, permease [Haemophilus parasuis 29755] Length = 223 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 64/220 (29%), Positives = 123/220 (55%), Gaps = 11/220 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIA-CISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + +D P LLY+A ++TL +A C + L+ F V+ T++ V + R Sbjct: 1 MFLDYLP-LLYSATLMTLGLAVCSLLLGLLLSILF--VVLETHKWTMVRKPTTVVVALLR 57 Query: 67 GTPLLVQLFVIFYGLPHI-----G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 G P ++ +F+I++G P + G + +F +++L++ F++Y S+ +R +I +IP Sbjct: 58 GLPEILVVFLIYFGAPEVLEMITGEYVELGAFGCGVVALSIIFASYASQSLRGAIQAIPL 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW++ A+GL+R T +I++PQ + LS++++ +LK T++ S I + +I + + Sbjct: 118 GQWESGAALGLSRGYTFVNIVMPQVWRHALPGLSNQWLVLLKDTALVSLIGVHDIMRQTE 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 I ++T+QP Y A +YL +T +I K+E T+ Sbjct: 178 LINTSTHQPFTWYGTAALIYLGVTLVSQVIIRKLELRFTR 217 >gi|313617523|gb|EFR89868.1| L-cystine transport system permease protein TcyM [Listeria innocua FSL S4-378] Length = 236 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 113/219 (51%), Gaps = 20/219 (9%) Query: 20 AIVVTLPIACISFVISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 A++ T+P+ ++ GF IA+ IR++ + I FYV FR TP ++ + Sbjct: 15 AMLKTIPLTLAMTFFPILFGFIIAILLTLIRMYHV-CFLEPIAKFYVSFFRSTPAILHIM 73 Query: 76 VIFYGLPHIGIVFDS--------------FVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 +I+ G+P I + F S V +II+L+ AY++EI+RS II++ GQ Sbjct: 74 LIYLGIPLI-VDFLSKSLDLSISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQ 132 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+Y++G T Q IR ++LPQ TS ++ I L +TS+A+ + +PEI A + Sbjct: 133 MEAAYSMGYTHGQAIRKVLLPQAFMTSLPNFTNLCIGFLHTTSIAAIVAVPEITGMATIV 192 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S Y L + A +Y LT I +E ++ ++ Sbjct: 193 ASDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKY 231 >gi|258620246|ref|ZP_05715285.1| arginine ABC transporter, permease protein [Vibrio mimicus VM573] gi|262164885|ref|ZP_06032623.1| arginine ABC transporter permease protein ArtM [Vibrio mimicus VM223] gi|258587604|gb|EEW12314.1| arginine ABC transporter, permease protein [Vibrio mimicus VM573] gi|262027265|gb|EEY45932.1| arginine ABC transporter permease protein ArtM [Vibrio mimicus VM223] Length = 222 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 96/179 (53%), Gaps = 18/179 (10%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS---------L 98 +FS +I+L F GTPLLVQ+F+++YG + +S + + +S L Sbjct: 47 WFSRALITL--------FTGTPLLVQIFLVYYGPGQFEWIRESVLWVWLSQPWFCAMFAL 98 Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158 LN +AY +++ + + +IP GQW A A+G+ + T+R ++LP + + S+E I Sbjct: 99 ALNTAAYSTQLFKGAFNAIPSGQWQACRALGMNKIATLR-VLLPYALRRAVPAYSNEVIL 157 Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + K TS+ASTITI ++ AQRI + TY L ++ YL + ++ +IE Sbjct: 158 VFKGTSLASTITIMDLMGYAQRINAQTYDTLTVFGVAGAFYLTVNGALTLLFRQIEKKA 216 >gi|241114114|ref|YP_002973589.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] gi|240868687|gb|ACS66345.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] Length = 245 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 99/189 (52%), Gaps = 13/189 (6%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP---- 82 I+ +S+ ++L +G V R + YV FR TPLLVQLF+ FY LP Sbjct: 35 ISLLSWTLALALGTLFGVARTL-PQRWVRWPSAAYVHCFRNTPLLVQLFLWFYVLPELLP 93 Query: 83 --------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 + + F+ +++ LTL +A +E IR+ I SI GQ A A+GL+ Sbjct: 94 VDWGNAIKQMNPTLNQFLTVVLCLTLYSAAKCAEQIRAGIESIAAGQRAAGLALGLSTGG 153 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 RH+ILPQ PL+S+F+++ K+++VA TI + E+ ++++ + QP + Sbjct: 154 IYRHVILPQAFRIIIPPLTSDFMNVFKNSAVALTIGLMELTGQSRQLSEFSAQPFESFLA 213 Query: 195 LAFVYLILT 203 +Y+++T Sbjct: 214 ATVIYMLVT 222 >gi|308068846|ref|YP_003870451.1| amino acid ABC transporter permease ytmL [Paenibacillus polymyxa E681] gi|305858125|gb|ADM69913.1| Probable amino-acid ABC transporter permease protein ytmL [Paenibacillus polymyxa E681] Length = 259 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 95/169 (56%), Gaps = 7/169 (4%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 YV FRGTP+L+QLF+++YGLP + +D + + LN A+ISEIIRS Sbjct: 60 YVSFFRGTPILIQLFLVYYGLPELLKLVDINSSRWDVLWFAVATYALNSGAFISEIIRSG 119 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + ++ +GQ +A+ ++G++ QT II+PQ + S+ I LK TS+A TI E Sbjct: 120 VEAVDRGQIEAAQSVGMSGYQTFTRIIMPQALAVVVPVFSNLVIGNLKDTSLAFTIGAME 179 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 + +Q + S T + Y L+ +YL+++ + +E+++ +H + Sbjct: 180 MTGKSQTLGSATQHFVETYIALSLIYLVISLILQKLFKVLENTLLRHEH 228 >gi|188533325|ref|YP_001907122.1| Histidine transport system permease protein [Erwinia tasmaniensis Et1/99] gi|188028367|emb|CAO96228.1| Histidine transport system permease protein [Erwinia tasmaniensis Et1/99] Length = 238 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 54/153 (35%), Positives = 91/153 (59%), Gaps = 10/153 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEII 110 + +IFRGTPL VQL V + G+ + +V ++F +++LTLN AY +E+ Sbjct: 62 FTYIFRGTPLYVQLLVFYSGMYTLEVVKGTELLNAFFRSGLNCTLLALTLNTCAYTTEVF 121 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +I ++P G+ +A+ A G + + R II+P + T+ S+E I +L ST++A T T Sbjct: 122 AGAIRAVPHGEIEAARAYGFSTFKLYRCIIMPSALRTALPAYSNEVILMLHSTALAFTAT 181 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +P++ + A+ I S TYQP I + A +YLI++ Sbjct: 182 VPDLLKVARDINSATYQPFIAFGIAAVLYLIIS 214 >gi|260495457|ref|ZP_05815583.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Fusobacterium sp. 3_1_33] gi|260196994|gb|EEW94515.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Fusobacterium sp. 3_1_33] Length = 219 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 51/140 (36%), Positives = 86/140 (61%), Gaps = 5/140 (3%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 FF I+ Y+ + R TPLLVQLF +++GLP +G+ F + II LT +Y+ Sbjct: 48 FFKQIIVG-----YIELSRNTPLLVQLFFLYFGLPKVGLRFSPEICGIIGLTFLGGSYMI 102 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E RS++ +I K Q +++ ++G+TR QT+R++ILPQ+ S L++ I +LK TSV S Sbjct: 103 ETFRSALETIDKIQKESALSLGMTRWQTMRYVILPQSFVISLPGLTANIIFLLKETSVFS 162 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I++ ++ A+ ++ Y+ Sbjct: 163 AISLMDMMFVAKDLIGLYYK 182 >gi|238019791|ref|ZP_04600217.1| hypothetical protein VEIDISOL_01666 [Veillonella dispar ATCC 17748] gi|282849422|ref|ZP_06258807.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745] gi|294794721|ref|ZP_06759856.1| probable amino-acid permease protein YxeN [Veillonella sp. 3_1_44] gi|237863315|gb|EEP64605.1| hypothetical protein VEIDISOL_01666 [Veillonella dispar ATCC 17748] gi|282581126|gb|EFB86524.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745] gi|294454083|gb|EFG22457.1| probable amino-acid permease protein YxeN [Veillonella sp. 3_1_44] Length = 238 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 61/174 (35%), Positives = 104/174 (59%), Gaps = 18/174 (10%) Query: 21 IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG 80 + VTL I +S + I+G V++ ++S + + YV + R P +V L++++YG Sbjct: 21 VKVTLMITFLSVGLGTILGLLSCVLQQN-KVPVLSQLSYLYVLLCRSIPNMVLLYLVYYG 79 Query: 81 LPHIGIVFD--------------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 LP + + + +FVA++ LTL+ AY+SEI R+++ S+PKGQ +A+ Sbjct: 80 LPILFLALEDQTGVHVPFEKVPATFVAVV-GLTLHTGAYLSEIFRAALQSVPKGQMEAAQ 138 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQ 179 AIG+T Q R I+LPQ T A+PL +++F++ +KSTS+ IT+ E+F A+ Sbjct: 139 AIGMTWFQAFRRIVLPQA-TVFALPLFTNQFLNTMKSTSIVFVITVIELFGAAK 191 >gi|226304942|ref|YP_002764900.1| ABC transporter permease protein [Rhodococcus erythropolis PR4] gi|226184057|dbj|BAH32161.1| putative ABC transporter permease protein [Rhodococcus erythropolis PR4] Length = 324 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 111/216 (51%), Gaps = 23/216 (10%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 AA+ +T+ + ++ +G F+A+ R+ + ++ +I Y+W FR PL+VQL F Sbjct: 73 AALWMTIKLTLWGTILGFGLGVFLALGRLS-KNPVLQVIAWTYIWAFRSIPLIVQLLFWF 131 Query: 79 Y----------GLP--------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 G+P + V F A +I L L+ +AY +EIIRS IIS+ G Sbjct: 132 NITYLYQTLSLGIPFGPEFFTFQVSGVIGGFTAAVIGLALHQAAYSAEIIRSGIISVDHG 191 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A++++G+ R + I+LPQ + ++E I + K TS+ ST+ I E+F Q Sbjct: 192 QIEAAHSLGIPRSRQFFKIVLPQAMRAILPNAANEVIGLFKGTSIVSTMAIAELFYQVQV 251 Query: 181 IVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 I + PL++ + Y+ILT+ I Q +E Sbjct: 252 IFGRNGRVVPLLMVATI--WYIILTTLLSIGQYYVE 285 >gi|329297839|ref|ZP_08255175.1| glutamine ABC transporter permease protein [Plautia stali symbiont] Length = 218 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 98/168 (58%), Gaps = 2/168 (1%) Query: 37 IIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAII 95 IIG R I + +V + RGTP++VQ+ I++ LP + I D A I Sbjct: 35 IIGLLAGTCRAL-GGKIAKTLSLIFVELIRGTPIMVQVMFIYFALPMVLPIRIDPVTAAI 93 Query: 96 ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSE 155 +++ +N SAYI+EI R +I+SI +G +AS A+GL+++ T+ ++I+P + L ++ Sbjct: 94 VTIVINSSAYIAEITRGAILSINRGFKEASLAMGLSQRGTLWYVIMPLALRRMIPALGNQ 153 Query: 156 FISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +I +K TS+ I + E+ + Q I++ ++ L ++ +A +YL++T Sbjct: 154 WIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEVWTAVAMIYLLVT 201 >gi|310820157|ref|YP_003952515.1| amino acid ABC transporter permease [Stigmatella aurantiaca DW4/3-1] gi|309393229|gb|ADO70688.1| Amino acid ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1] Length = 482 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 76/109 (69%), Gaps = 1/109 (0%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +S + YV + RGTP+L+QL+V+++GL + + D+F A I+ L LN++AY +E+ R+ Sbjct: 317 LSRLATAYVELLRGTPVLLQLYVLYFGLAGV-LRLDAFSAAILGLGLNYAAYEAEVYRAG 375 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 ++++P+GQ +A+ A+G+T +R +++PQ + ++++FI++LK Sbjct: 376 VLAVPRGQMEAALALGMTTPLALRRVVVPQAFRVALPGVTNDFIALLKD 424 >gi|308446221|ref|XP_003087125.1| hypothetical protein CRE_25053 [Caenorhabditis remanei] gi|308261293|gb|EFP05246.1| hypothetical protein CRE_25053 [Caenorhabditis remanei] Length = 210 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 97/169 (57%), Gaps = 1/169 (0%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 +A+V TL I+ IS ++++++G I I I + + I Y+ + R TPLL+QLF ++ Sbjct: 6 SAMVTTLKISIISIILAILVGL-ICSILITYRVRVFDKIAKIYIELSRNTPLLIQLFFLY 64 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 YGLP +GI D F +I LT +Y++E R+ + ++ KGQ D+ +IGL Q ++ Sbjct: 65 YGLPKLGIKIDGFSCGVIGLTFLGGSYMAEAFRAGLQAVAKGQIDSGESIGLNPLQVFQY 124 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +I PQ + S + + + ++K +SV S I + E+ + ++ Y+ Sbjct: 125 VIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKDLIGMDYK 173 >gi|256026688|ref|ZP_05440522.1| permease protein of ABC transporter system [Fusobacterium sp. D11] gi|289764683|ref|ZP_06524061.1| amino acid ABC transporter [Fusobacterium sp. D11] gi|289716238|gb|EFD80250.1| amino acid ABC transporter [Fusobacterium sp. D11] Length = 219 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 50/140 (35%), Positives = 87/140 (62%), Gaps = 5/140 (3%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 FF I+ Y+ + R TPLLVQLF +++GLP +G+ F+ + II LT +Y+ Sbjct: 48 FFKQIIVG-----YIELSRNTPLLVQLFFLYFGLPKVGLRFNPEICGIIGLTFLGGSYMI 102 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E RS++ +I K Q +++ ++G+T+ QT+R++ILPQ+ S L++ I +LK TSV S Sbjct: 103 ETFRSALETIDKIQKESALSLGMTKWQTMRYVILPQSFVISLPGLTANIIFLLKETSVFS 162 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I++ ++ A+ ++ Y+ Sbjct: 163 AISLMDMMFVAKDLIGLYYK 182 >gi|207722495|ref|YP_002252931.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2] gi|206587676|emb|CAQ18258.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2] Length = 230 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 1/145 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V RGTP L+ L + +Y +P + G+ A I +L N SAY+ EI+R ++ S+P Sbjct: 65 WVSAIRGTPALIHLLLAYYVVPPLLGLSISPLTAGIGALACNTSAYLVEILRGALSSVPD 124 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q A+ A+G+ Q RH++LPQ + PL+SEF +LK++S+ S I +PE+ A+ Sbjct: 125 AQRAAAQALGMREPQVWRHVLLPQVFYRAIPPLTSEFTILLKASSLMSIIAVPELATVAR 184 Query: 180 RIVSTTYQPLIIYCELAFVYLILTS 204 + PL ++ A VY ++ S Sbjct: 185 NASLQSDLPLQVFAMTAAVYFVILS 209 >gi|170693092|ref|ZP_02884253.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Burkholderia graminis C4D1M] gi|170142090|gb|EDT10257.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Burkholderia graminis C4D1M] Length = 219 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 47/134 (35%), Positives = 79/134 (58%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +S + F V R TPLL+Q++V+FY LP GI + A + + L+++ Y SE+ R+ Sbjct: 53 VSRTVGFIVEFIRSTPLLIQVYVLFYVLPVYGITMSALTAGTVGIALHYACYTSEVYRAG 112 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + + +GQW+A+ A+ L+ +T +ILPQ I L + +++ K T V S IT+ E Sbjct: 113 LNGVARGQWEAACALSLSPWRTYSGVILPQAIRPVIPALGNYLVAMFKDTPVLSAITVVE 172 Query: 174 IFQTAQRIVSTTYQ 187 + Q A+ I S T++ Sbjct: 173 LMQQAKNIGSETFR 186 >gi|161507108|ref|YP_001577062.1| glutamine ABC transporter permease [Lactobacillus helveticus DPC 4571] gi|160348097|gb|ABX26771.1| Glutamine ABC transporter permease [Lactobacillus helveticus DPC 4571] Length = 213 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 99/174 (56%), Gaps = 1/174 (0%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 I+ + SLI+G F A++ + ++ Y+ IFR PLLV + + + +P + Sbjct: 25 IALIFSLILGVFFALLEVA-PTKFGKIVAKVYIAIFRNIPLLVIVMIFYLIVPRYIVKLS 83 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 F A I LTL SA+I+E +R+ I SI GQ + + + G+T Q +R++ILPQ + Sbjct: 84 GFQAGTIGLTLYTSAFIAETVRAGISSIGTGQMEGARSNGMTYTQAMRYVILPQAMKIVI 143 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++SV + + ++ AQ I +T++ + Y + YLILT Sbjct: 144 PPLGNQFVNLVKNSSVLAFVAGFDLMYQAQLIAFSTFRTIDTYVVVGLFYLILT 197 >gi|77413498|ref|ZP_00789688.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] gi|77160442|gb|EAO71563.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] Length = 207 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 98/174 (56%), Gaps = 8/174 (4%) Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIR 111 LI YV +F+ TPLLVQ+ ++YGL I ++ +F ++ + L AYISE+IR Sbjct: 37 KLISRIYVEVFQNTPLLVQMVFVYYGLAIISNGHVMISAFFTAVLCVGLYHGAYISEVIR 96 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S I ++PKGQ +A+ A G T QT++ IILPQ + T P++++ ++++K+TS + I+ Sbjct: 97 SGIEAVPKGQTEAALAQGFTANQTMQLIILPQAVRTILPPMTNQVVNLIKNTSTVAIISG 156 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ--IKIESSVTQHTYS 223 +I A+ T + + A Y ++ C+ + + + + + TYS Sbjct: 157 ADIMFVAKAWAYDTTNYIPAFAGAAIFYFVI---CFPLASWARKQEELNKKTYS 207 >gi|312198104|ref|YP_004018165.1| polar amino acid ABC transporter inner membrane protein [Frankia sp. EuI1c] gi|311229440|gb|ADP82295.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EuI1c] Length = 214 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 103/183 (56%), Gaps = 2/183 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 N+++D + + + TL + +SF+++L +G +A R+ + + + + YV Sbjct: 1 MNVVLDHL-DVFGSGLSTTLQLTALSFLLALGVGVVVATARVCPAAPLRAAGL-VYVETV 58 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP LV + + YGLP G+ + FV+ ++ L A+++E + S I S+P GQ +A+ Sbjct: 59 RNTPPLVLILLFVYGLPKTGVRYSLFVSAVLVLGGYTGAFVAEALLSGIRSVPVGQAEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++GLT T+RH++LPQ PL + +++++TS+A+ I + E+ A ++ ++ Sbjct: 119 RSLGLTFTGTLRHVVLPQAFRAVVPPLGALLSALVRNTSLAAPIGVLELTARAGQLNTSD 178 Query: 186 YQP 188 P Sbjct: 179 PSP 181 >gi|262043353|ref|ZP_06016481.1| histidine transport system permease HisQ [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039305|gb|EEW40448.1| histidine transport system permease HisQ [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 235 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 112/225 (49%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F Q++ +VTL +A S V++++IG A ++ S+ ++L+ Y + RG P L Sbjct: 11 GFSQVILQGALVTLELALSSVVLAVLIGLAGAGAKLS-SNRPLALVFEGYTTLIRGVPDL 69 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G+ D +A II+L + AY +E R + +++PKG Sbjct: 70 VLMLLIFYGLQIALNSVTDVLGMAQFDIDPMIAGIITLGFIYGAYFTETFRGAYLAVPKG 129 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G + QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 130 HIEAATAFGFSGGQTFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 189 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T+QP +YL+ T+ + + +E T D Sbjct: 190 AGKSTWQPFYFAIVCGLIYLVFTTVSNGVLLLLERRYTVGVKRAD 234 >gi|257465093|ref|ZP_05629464.1| arginine transporter permease subunit ArtQ [Actinobacillus minor 202] gi|257450753|gb|EEV24796.1| arginine transporter permease subunit ArtQ [Actinobacillus minor 202] Length = 223 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 116/198 (58%), Gaps = 14/198 (7%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH---FYVWIFRGTPLLV 72 L+Y+A ++TL +A + SLI+G ++++ + + +S+I ++ + RG P ++ Sbjct: 8 LIYSATLMTLGLA----LASLIVGLLLSILFVSLETSKLSVISKPTTVFLALLRGLPEIL 63 Query: 73 QLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 + +I++G L I F +F +++L+L F+AY S+ +R +I ++P GQW++ Sbjct: 64 VVLLIYFGSTELIEKLTGEYIEFSAFNCGVLALSLIFAAYASQSLRGAIQAVPIGQWESG 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL+R T HII+PQ + LS++++ +LK T++ S I + ++ + ++ I + Sbjct: 124 TALGLSRGYTFIHIIMPQVWRHALPGLSNQWLVLLKDTALVSLIGVHDLMRQSELINTNE 183 Query: 186 YQPLIIYCELAFVYLILT 203 +QP + A +YL +T Sbjct: 184 HQPFTWFGLAALIYLAIT 201 >gi|227327248|ref|ZP_03831272.1| histidine ABC transporter permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 238 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 113/214 (52%), Gaps = 11/214 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL + S VI ++ +A+ R+ S + + ++FRGTPL VQL V + Sbjct: 22 GLAMTLWLLISSVVIGGLMALPLAIARVS-PRRRFSFPVWLFTYVFRGTPLYVQLLVFYS 80 Query: 80 GLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 G+ + IV ++F I++L LN AY +EI +I ++P G+ +A+ A G Sbjct: 81 GVYSLEIVRGTDMLNAFFRSGLNCAILALALNTCAYTTEIFAGAIRAVPHGEIEAARAYG 140 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 +R + R IILP + + S+E I +L ST++A T+T+P+I + A+ I + TYQP Sbjct: 141 FSRFKQYRCIILPGALRIALPAYSNEVILMLHSTALAFTVTVPDILKIARDINAATYQPF 200 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + A +YL ++ + K E +H Y+ Sbjct: 201 YAFGIAAVIYLAISFVLIGLFRKAERHWLRHLYT 234 >gi|260102750|ref|ZP_05752987.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus DSM 20075] gi|260083443|gb|EEW67563.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus DSM 20075] Length = 213 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 99/174 (56%), Gaps = 1/174 (0%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 I+ + SLI+G F A++ + ++ Y+ IFR PLLV + + + +P + Sbjct: 25 IALIFSLILGVFFALLEVA-PTKFGKIVAKVYIAIFRNIPLLVIVMIFYLIVPRYIVKLS 83 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 F A I LTL SA+I+E +R+ I SI GQ + + + G+T Q +R++ILPQ + Sbjct: 84 GFQAGTIGLTLYTSAFIAETVRAGISSISTGQMEGARSNGMTYTQAMRYVILPQAMKIVI 143 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++SV + + ++ AQ I +T++ + Y + YLILT Sbjct: 144 PPLGNQFVNLVKNSSVLAFVAGFDLMYQAQLIAFSTFRTIDTYVVVGLFYLILT 197 >gi|57237521|ref|YP_178535.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter jejuni RM1221] gi|205355341|ref|ZP_03222112.1| amino-acid ABC transporter integral membrane protein [Campylobacter jejuni subsp. jejuni CG8421] gi|57166325|gb|AAW35104.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni RM1221] gi|205346575|gb|EDZ33207.1| amino-acid ABC transporter integral membrane protein [Campylobacter jejuni subsp. jejuni CG8421] gi|315057887|gb|ADT72216.1| Amino-acid ABC transporter integral membrane protein [Campylobacter jejuni subsp. jejuni S3] Length = 233 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 20/200 (10%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I+ P L AA +T+ ++ + SLIIG F ++ +F I+ I Y+ Sbjct: 3 FDFILAQAPAFLTAA-WLTIKLSFFGIIFSLIIGLF-CILMSYFKIKILENICKLYIEFS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD------------------SFVAIIISLTLNFSAYIS 107 R TPLL+QLF ++Y LP I + SF I+ L+ +Y++ Sbjct: 61 RNTPLLIQLFFLYYALPKFNIHLEQIPPLNLICLSVEETLRPSFACAIVGLSFLGGSYMA 120 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E +R+ +I K Q++A ++G ++ +R++ILPQ + S +S+ I ++K TSV S Sbjct: 121 ESLRAGFEAIRKQQFEAGLSLGFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVS 180 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I +P++ + + S TY+ Sbjct: 181 IIALPDLVNLMKSLNSLTYK 200 >gi|307331405|ref|ZP_07610524.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Streptomyces violaceusniger Tu 4113] gi|306882964|gb|EFN14031.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Streptomyces violaceusniger Tu 4113] Length = 216 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 59/224 (26%), Positives = 116/224 (51%), Gaps = 13/224 (5%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-----IS 55 M + W ++ D P+L +++TL + +++ +G A+ F S T ++ Sbjct: 1 MTWNW-DVAKDFLPEL-GRGLLITLEATALGSILAFALGLVWAMA--FRSPTRFVRWPVA 56 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 ++ F R TPLLVQLF +Y LP I F + +I+L L++S Y +E+ R+ I Sbjct: 57 AVVEF----IRNTPLLVQLFFFYYVLPTWDIKFSALTTGVIALGLHYSTYTAEVYRAGID 112 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +P GQW+A+ A+ L+R +T +ILPQ I L + I++LK + + + I + ++ Sbjct: 113 GVPNGQWEAATALSLSRGRTWTAVILPQAIRRVVPALGNYVIAMLKDSPMLALIGVVDML 172 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 Q A+ ++++Q + Y + ++++ ++ +E + Sbjct: 173 QKARAEGASSFQYIEPYTMVGIAFIVIAYPASLLMRALERRLGH 216 >gi|294793250|ref|ZP_06758396.1| probable amino-acid permease protein YxeN [Veillonella sp. 6_1_27] gi|313893815|ref|ZP_07827381.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158 str. F0412] gi|294456195|gb|EFG24559.1| probable amino-acid permease protein YxeN [Veillonella sp. 6_1_27] gi|313441379|gb|EFR59805.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158 str. F0412] Length = 238 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 61/174 (35%), Positives = 104/174 (59%), Gaps = 18/174 (10%) Query: 21 IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG 80 + VTL I +S + I+G V++ ++S + + YV + R P +V L++++YG Sbjct: 21 VKVTLMITFLSVGLGTILGLLSCVLQQN-KVPVLSQLSYLYVLLCRSIPNMVLLYLVYYG 79 Query: 81 LPHIGIVFD--------------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 LP + + + +FVA++ LTL+ AY+SEI R+++ S+PKGQ +A+ Sbjct: 80 LPILFLALEDQTGVHVPFEKVPATFVAVV-GLTLHTGAYLSEIFRAALQSVPKGQMEAAQ 138 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQ 179 AIG+T Q R I+LPQ T A+PL +++F++ +KSTS+ IT+ E+F A+ Sbjct: 139 AIGMTWFQAFRRIVLPQA-TVFALPLFTNQFLNTMKSTSIVFVITVIELFGAAK 191 >gi|15672920|ref|NP_267094.1| amino acid ABC transporter permease protein [Lactococcus lactis subsp. lactis Il1403] gi|12723874|gb|AAK05036.1|AE006328_4 amino acid ABC transporter permease protein [Lactococcus lactis subsp. lactis Il1403] gi|326406481|gb|ADZ63552.1| polar amino acid transport system permease protein [Lactococcus lactis subsp. lactis CV56] Length = 295 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 13/160 (8%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI--------GIVFD-----SFVAIIISLT 99 I++ + +V RGTP+LVQL++ + G+P I G F+ + + +I++ Sbjct: 93 ILNQLRALFVSFIRGTPILVQLYLSYTGIPLILKAINMNYGTNFNVNTIPAMLFVIVAFA 152 Query: 100 LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISI 159 LN AY SE IR++I S+ KGQ +A+ ++G+T Q + LP+ T + PL + I + Sbjct: 153 LNEGAYNSETIRAAIQSVDKGQIEAAKSLGMTNFQVFMRVTLPEAATVATAPLGNALIGL 212 Query: 160 LKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 LKSTS+A + E+ AQ I +T++ Y LA VY Sbjct: 213 LKSTSLAFVAGVVEMTARAQIIGGSTFRLFETYLALALVY 252 >gi|15601789|ref|NP_233420.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1 biovar eltor str. N16961] gi|227812602|ref|YP_002812612.1| amino acid ABC transporter, permease protein [Vibrio cholerae M66-2] gi|229505829|ref|ZP_04395338.1| amino acid ABC transporter permease protein [Vibrio cholerae BX 330286] gi|229510316|ref|ZP_04399796.1| amino acid ABC transporter permease protein [Vibrio cholerae B33] gi|229517552|ref|ZP_04406997.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9] gi|229605362|ref|YP_002876066.1| amino acid ABC transporter permease protein [Vibrio cholerae MJ-1236] gi|298499805|ref|ZP_07009611.1| amino acid ABC transporter, permease [Vibrio cholerae MAK 757] gi|9658481|gb|AAF96932.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|227011744|gb|ACP07955.1| amino acid ABC transporter, permease protein [Vibrio cholerae M66-2] gi|227015682|gb|ACP11891.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|229345588|gb|EEO10561.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9] gi|229352761|gb|EEO17701.1| amino acid ABC transporter permease protein [Vibrio cholerae B33] gi|229356180|gb|EEO21098.1| amino acid ABC transporter permease protein [Vibrio cholerae BX 330286] gi|229371848|gb|ACQ62270.1| amino acid ABC transporter permease protein [Vibrio cholerae MJ-1236] gi|297541786|gb|EFH77837.1| amino acid ABC transporter, permease [Vibrio cholerae MAK 757] Length = 266 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 49/140 (35%), Positives = 89/140 (63%), Gaps = 3/140 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQ++++++ P IG+ D F +++L L AY +E+ R + SIP+ Sbjct: 104 YIAVVRNTPLLVQIYLLYFVFGPVIGL--DRFATAVLALALFQGAYTAEVFRGGLNSIPQ 161 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ ++GL+R T +ILPQ + + PL++E +S++K++S+ S + I ++ + Sbjct: 162 GQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGR 221 Query: 180 RIVSTTYQPLIIYCELAFVY 199 IVS T P I+ +A +Y Sbjct: 222 NIVSETAMPFEIWFSVAAIY 241 >gi|16761278|ref|NP_456895.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765680|ref|NP_461295.1| histidine/lysine/arginine/ornithine transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141026|ref|NP_804368.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56412750|ref|YP_149825.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62180924|ref|YP_217341.1| lysine/arginine/ornithine ABC transporter [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161612914|ref|YP_001586879.1| hypothetical protein SPAB_00620 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167549642|ref|ZP_02343401.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167993040|ref|ZP_02574135.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168237377|ref|ZP_02662435.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168242477|ref|ZP_02667409.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261625|ref|ZP_02683598.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465938|ref|ZP_02699808.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194445801|ref|YP_002041616.1| histidine ABC transporter permease protein HisQ [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450619|ref|YP_002046408.1| histidine ABC transporter permease HisQ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194736324|ref|YP_002115423.1| histidine ABC transporter permease HisQ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197264105|ref|ZP_03164179.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197361684|ref|YP_002141320.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243854|ref|YP_002216425.1| histidine ABC transporter permease HisQ [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200388297|ref|ZP_03214909.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204928994|ref|ZP_03220137.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207857771|ref|YP_002244422.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213426991|ref|ZP_03359741.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581828|ref|ZP_03363654.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213612823|ref|ZP_03370649.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213649621|ref|ZP_03379674.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213852675|ref|ZP_03382207.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224583159|ref|YP_002636957.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238912367|ref|ZP_04656204.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289827474|ref|ZP_06546086.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|61225733|sp|P0A2I9|HISQ_SALTY RecName: Full=Histidine transport system permease protein hisQ gi|61225734|sp|P0A2J0|HISQ_SALTI RecName: Full=Histidine transport system permease protein hisQ gi|25296629|pir||AG0800 histidine transport system permease protein STY2583 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|47732|emb|CAA24660.1| unnamed protein product [Salmonella enterica subsp. enterica serovar Typhimurium] gi|154126|gb|AAA75579.1| Q protein [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16420895|gb|AAL21254.1| histidine and lysine/arginine/ornithine transport system [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503577|emb|CAD07585.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29136651|gb|AAO68217.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127007|gb|AAV76513.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62128557|gb|AAX66260.1| ABC superfamily (membrane),histidine and lysine/arginine/ornithine transport system [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161362278|gb|ABX66046.1| hypothetical protein SPAB_00620 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404464|gb|ACF64686.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408923|gb|ACF69142.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194711826|gb|ACF91047.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631271|gb|EDX49831.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197093160|emb|CAR58604.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197242360|gb|EDY24980.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289601|gb|EDY28964.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197938370|gb|ACH75703.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199605395|gb|EDZ03940.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204321538|gb|EDZ06737.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205325459|gb|EDZ13298.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205328791|gb|EDZ15555.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205338316|gb|EDZ25080.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205349591|gb|EDZ36222.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709574|emb|CAR33919.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467686|gb|ACN45516.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247559|emb|CBG25386.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994453|gb|ACY89338.1| histidine/lysine/arginine/ornithine transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158911|emb|CBW18424.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913344|dbj|BAJ37318.1| histidine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321222946|gb|EFX48017.1| Histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322617098|gb|EFY14004.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617596|gb|EFY14495.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624774|gb|EFY21603.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630324|gb|EFY27094.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634504|gb|EFY31237.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639215|gb|EFY35907.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640078|gb|EFY36745.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645702|gb|EFY42226.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652066|gb|EFY48429.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656238|gb|EFY52535.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659390|gb|EFY55637.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665850|gb|EFY62033.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669911|gb|EFY66052.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673896|gb|EFY69993.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678655|gb|EFY74711.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683550|gb|EFY79564.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687625|gb|EFY83595.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322715402|gb|EFZ06973.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130684|gb|ADX18114.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323193540|gb|EFZ78745.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198447|gb|EFZ83549.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204559|gb|EFZ89562.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208503|gb|EFZ93442.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213641|gb|EFZ98430.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218324|gb|EGA03034.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222921|gb|EGA07270.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224504|gb|EGA08786.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232319|gb|EGA16422.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235647|gb|EGA19731.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323241193|gb|EGA25229.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244935|gb|EGA28937.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250054|gb|EGA33948.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253838|gb|EGA37663.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323254975|gb|EGA38766.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259838|gb|EGA43470.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264141|gb|EGA47648.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270839|gb|EGA54277.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326624177|gb|EGE30522.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332989286|gb|AEF08269.1| histidine/lysine/arginine/ornithine transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] gi|223501|prf||0809313C protein hisQ Length = 228 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 110/225 (48%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V++++IG A ++ + + LI Y + RG P L Sbjct: 4 GFSGVILQGAIVTLELALSSVVLAVLIGLVGAGAKLS-QNRVTGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP-HIGIVFDSF----------VAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL + +V DS VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNVVTDSLGIDQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G T QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTHGQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T++P +YL+ T+ + + +E + D Sbjct: 183 AGKSTWEPFYFAVVCGLIYLVFTTVSNGVLLLLERRYSVGVKRAD 227 >gi|121587165|ref|ZP_01676940.1| amino acid ABC transporter, permease protein [Vibrio cholerae 2740-80] gi|121726614|ref|ZP_01679850.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52] gi|147672412|ref|YP_001215044.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|153817648|ref|ZP_01970315.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC 8457] gi|153821766|ref|ZP_01974433.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33] gi|254850197|ref|ZP_05239547.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255746231|ref|ZP_05420178.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS 101] gi|262158721|ref|ZP_06029835.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE 91/1] gi|262168871|ref|ZP_06036565.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27] gi|121548604|gb|EAX58656.1| amino acid ABC transporter, permease protein [Vibrio cholerae 2740-80] gi|121630920|gb|EAX63300.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52] gi|126511804|gb|EAZ74398.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC 8457] gi|126520762|gb|EAZ77985.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33] gi|146314795|gb|ABQ19335.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|254845902|gb|EET24316.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255735985|gb|EET91383.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS 101] gi|262022570|gb|EEY41277.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27] gi|262029601|gb|EEY48251.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE 91/1] Length = 265 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 49/140 (35%), Positives = 89/140 (63%), Gaps = 3/140 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQ++++++ P IG+ D F +++L L AY +E+ R + SIP+ Sbjct: 103 YIAVVRNTPLLVQIYLLYFVFGPVIGL--DRFATAVLALALFQGAYTAEVFRGGLNSIPQ 160 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ ++GL+R T +ILPQ + + PL++E +S++K++S+ S + I ++ + Sbjct: 161 GQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGR 220 Query: 180 RIVSTTYQPLIIYCELAFVY 199 IVS T P I+ +A +Y Sbjct: 221 NIVSETAMPFEIWFSVAAIY 240 >gi|294676183|ref|YP_003576798.1| amino acid ABC transporter permease [Rhodobacter capsulatus SB 1003] gi|294475003|gb|ADE84391.1| amino acid ABC transporter, permease protein [Rhodobacter capsulatus SB 1003] Length = 232 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 117/218 (53%), Gaps = 13/218 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + P+LL + TL + + ++ + +A+IR+ +++ Y+ RGTPLL Sbjct: 10 NLPKLL-DGLETTLILTGLGAALAAVFSPGLALIRLS-GPAPAKVLLRVYISFMRGTPLL 67 Query: 72 VQLFVIFYG-------LPHIGI---VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 QLF++FYG L +G+ D F ++ LN AY +EI+R + ++P G+ Sbjct: 68 AQLFLVFYGSGQFRAELTTLGLWSFFRDPFNCAVLVFVLNSCAYQTEILRGGLQAVPPGE 127 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ AIG+TR Q + + P + L +E I ++K++++AS +T+ ++ ++I Sbjct: 128 IEAARAIGMTRAQVLARVTFPHAYRIAWPALGNEVILLMKASALASIVTVFDLMGRTRQI 187 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S +++ +Y E A +YL++T + +IE +T+ Sbjct: 188 FSRSFE-FSVYFEAAVLYLLITVLFVFLWRQIERRLTR 224 >gi|254444336|ref|ZP_05057812.1| ABC transporter, permease protein, putative [Verrucomicrobiae bacterium DG1235] gi|198258644|gb|EDY82952.1| ABC transporter, permease protein, putative [Verrucomicrobiae bacterium DG1235] Length = 262 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 90/158 (56%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV I RGTPLLVQ+ +IFY + + +V II L+L AY+SEI R+ I S+ Sbjct: 102 YVEITRGTPLLVQMLLIFYVFADAAHIENRYVVGIIILSLFSGAYVSEIFRAGIESVGSS 161 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q ++ +IG T QT R++I PQ ++ S L+ +F +++K +S+ S I I E AQ Sbjct: 162 QLLSAKSIGFTPYQTFRYVIFPQALSRSLPALAGQFANLIKDSSLLSIIAISEFTLNAQE 221 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 + ++T + LA YL+LT + + ++E +T Sbjct: 222 VNTSTLSAFESFFPLAIGYLLLTLPIFHLSRRLEKQLT 259 >gi|86149175|ref|ZP_01067407.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni CF93-6] gi|85840533|gb|EAQ57790.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni CF93-6] Length = 233 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 20/200 (10%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I+ P L AA +T+ ++ + SLIIG F ++ +F I+ I Y+ Sbjct: 3 FDFILAQAPAFLTAA-WLTIKLSFFGIIFSLIIGLF-CILMSYFKIKILENICKLYIEFS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD------------------SFVAIIISLTLNFSAYIS 107 R TPLL+QLF ++Y LP I + SF I+ L+ +Y++ Sbjct: 61 RNTPLLIQLFFLYYALPKFNIHLEQIPPLDLICLSIEETLRPSFACAIVGLSFLGGSYMA 120 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E +R+ +I K Q++A ++G ++ +R++ILPQ + S +S+ I ++K TSV S Sbjct: 121 ESLRAGFEAIRKQQFEAGLSLGFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVS 180 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I +P++ + + S TY+ Sbjct: 181 IIALPDLVNLMKSLNSLTYK 200 >gi|311279447|ref|YP_003941678.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] gi|308748642|gb|ADO48394.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] Length = 252 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 60/178 (33%), Positives = 97/178 (54%), Gaps = 31/178 (17%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGL------PHIGIV-----------------FD 89 ++ + FYV FRGTPL VQ+ V+ + L P G++ + Sbjct: 61 LVQFPVRFYVSAFRGTPLFVQIMVVHFALIPLFINPRDGLLVTGGLMSSDFARALRADYG 120 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 +F++ I+++TLN AY+SEI R+ I SI KGQ +AS A+G+ +++R +ILPQ Sbjct: 121 AFLSCIVAITLNAGAYVSEIFRAGIQSIDKGQMEASCALGMPWWKSMRKVILPQAFRRIL 180 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY----QPLIIYCELAFVYLILT 203 PL + I+I+K +S+AS I + ++ A R VS Y +P Y ++ VY ++T Sbjct: 181 PPLGNNAIAIVKDSSLASAIGLADL-AYAARTVSGAYATYWEP---YLTISVVYWVIT 234 >gi|307727080|ref|YP_003910293.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Burkholderia sp. CCGE1003] gi|307587605|gb|ADN61002.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Burkholderia sp. CCGE1003] Length = 219 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 47/134 (35%), Positives = 79/134 (58%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +S + F V R TPLL+Q++V+FY LP GI + A + + L+++ Y SE+ R+ Sbjct: 53 VSRTVGFIVEFIRSTPLLIQVYVLFYVLPVYGITMSALTAGTVGIALHYACYTSEVYRAG 112 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + + +GQW+A+ A+ L+ +T +ILPQ I L + +++ K T V S IT+ E Sbjct: 113 LNGVARGQWEAACALSLSPWRTYSGVILPQAIRPVIPALGNYLVAMFKDTPVLSAITVVE 172 Query: 174 IFQTAQRIVSTTYQ 187 + Q A+ I S T++ Sbjct: 173 LMQQAKNIGSETFR 186 >gi|290961303|ref|YP_003492485.1| binding-protein-dependent ABC transporter transmembrane protein [Streptomyces scabiei 87.22] gi|260650829|emb|CBG73946.1| putative binding-protein-dependent transport system transmembrane subunit [Streptomyces scabiei 87.22] Length = 305 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 16/196 (8%) Query: 36 LIIGFFIAVIR-----IFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI---GIV 87 L++G IAV R +FF + + Y FRG PL++ L ++ G+P + G+ Sbjct: 110 LVLGMLIAVARTLRGPVFFP---VRALAAAYTDFFRGLPLIINLMIVVLGVPALRLQGVT 166 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 D + +LTL +SAY++E+ R+ I S+ Q A+ ++GLT +Q +RH++LPQ + Sbjct: 167 VDPVLLGGTALTLTYSAYVAEVFRAGIESVHPSQRAAARSLGLTNRQALRHVVLPQAVRR 226 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV--STTYQPLIIYCELAFVYLI--LT 203 PL ++ +S+ K T + S + + A IV S Y P I+ L FV L +T Sbjct: 227 QVPPLLNDLVSLQKDTGLVSIGGAIDAVRAADIIVGRSLNYTPYIV-AGLVFVALTIPMT 285 Query: 204 SFCYIIQIKIESSVTQ 219 F + +++ Q Sbjct: 286 RFTDWVTARMDRQRAQ 301 >gi|16273099|ref|NP_439333.1| arginine transporter permease subunit ArtM [Haemophilus influenzae Rd KW20] gi|260581122|ref|ZP_05848943.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus influenzae RdAW] gi|1168524|sp|P45089|ARTM_HAEIN RecName: Full=Arginine ABC transporter permease protein ArtM gi|1574102|gb|AAC22828.1| arginine ABC transporter, permease protein (artM) [Haemophilus influenzae Rd KW20] gi|260092251|gb|EEW76193.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus influenzae RdAW] Length = 227 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 60/177 (33%), Positives = 100/177 (56%), Gaps = 10/177 (5%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS---------LTL 100 + I ++ Y+ +F GTPLLVQ F+I+ G + DS + ++S L L Sbjct: 41 ENKWIKSAVNLYLTLFTGTPLLVQFFLIYAGPGQFQWIIDSPLWYVLSNAWFCAALALAL 100 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N +AY +++ ++ +IPKGQW++ A+GL R QT++ I++P + + S+E I + Sbjct: 101 NSAAYSTQLFHGAVKAIPKGQWESCGALGLNRIQTLK-ILIPYALKRALPSYSNEIILVF 159 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 K T++ASTITI +I A+++ T Y L IY +YLI+T ++ K+E V Sbjct: 160 KGTALASTITIMDIMGYARQLYGTEYDALTIYGIAGGIYLIITGIATLLLRKLEKKV 216 >gi|312883552|ref|ZP_07743277.1| ABC transporter permease [Vibrio caribbenthicus ATCC BAA-2122] gi|309368775|gb|EFP96302.1| ABC transporter permease [Vibrio caribbenthicus ATCC BAA-2122] Length = 225 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 109/208 (52%), Gaps = 17/208 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR-----IFFSDTIISLIMHF 60 F+LII+S P L + T+ + ++ V+ L + +AV R F + Sbjct: 3 FSLIIESMPIYL-DGLWTTVWLVGLALVVGLGVAIPLAVARNSEHYFLFGPSWA------ 55 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSII 115 +++ FRGTPLLVQL++I+YG+ V D ++ +++ LN SAY +EIIR +I Sbjct: 56 FIYFFRGTPLLVQLYLIYYGMDQFFPVKDTLWENAWFCALVAFILNTSAYTAEIIRGAIN 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +P+G+ +A+ A G+ T + IILP + + S+E I +L ++VA +TI ++ Sbjct: 116 GLPQGEVEAAKAYGMGSFMTYKRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLT 175 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + S Y P + Y+ LT Sbjct: 176 GAARLVNSRYYAPFESFLTAGLFYMALT 203 >gi|257455525|ref|ZP_05620757.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ [Enhydrobacter aerosaccus SK60] gi|257447094|gb|EEV22105.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ [Enhydrobacter aerosaccus SK60] Length = 257 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 98/202 (48%), Gaps = 14/202 (6%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L L I ++I+LIIG + ++R + T + I YV FR PLL+QL Sbjct: 32 QWLLTGFKWLLVIGGSGWLIALIIGTILGIMRTLPNKTARA-IGTAYVSFFRNIPLLIQL 90 Query: 75 FVIFYGLP-------------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 F FY P + + ++ I L L +A I E +R+ I S+PKGQ Sbjct: 91 FFWFYVAPTWLTPALQKWWFQELDPNTSAVISASIGLGLFTAARIVEQVRTGIESLPKGQ 150 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+YA+G T QT RHI+LPQ P+SSE + K+ SVAS + + E+ + I Sbjct: 151 TNAAYALGFTLPQTYRHIVLPQAFRVILPPMSSELTNCFKNASVASLVGVTELISQTKTI 210 Query: 182 VSTTYQPLIIYCELAFVYLILT 203 T + +Y +YL+ Sbjct: 211 SEYTQNNIEVYTFTTIIYLLFN 232 >gi|86153641|ref|ZP_01071844.1| amino-acid ABC transporter integral membrane protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842602|gb|EAQ59814.1| amino-acid ABC transporter integral membrane protein [Campylobacter jejuni subsp. jejuni HB93-13] Length = 233 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 20/200 (10%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I+ P L AA +T+ ++ + SLIIG F ++ +F I+ I Y+ Sbjct: 3 FDFILAQAPAFLTAA-WLTIKLSFFGIIFSLIIGLF-CILMSYFKIKILENICKLYIEFS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD------------------SFVAIIISLTLNFSAYIS 107 R TPLL+QLF ++Y LP I + SF I+ L+ +Y++ Sbjct: 61 RNTPLLIQLFFLYYALPKFNIHLEQIPPLNLICLSVEETLRPSFACAIVGLSFLGGSYMA 120 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E +R+ +I K Q++A ++G ++ +R++ILPQ + S +S+ I ++K TSV S Sbjct: 121 ESLRAGFEAIRKQQFEAGLSLGFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVS 180 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I +P++ + + S TY+ Sbjct: 181 IIALPDLVNLMKSLNSLTYK 200 >gi|116617557|ref|YP_817928.1| ABC-type amino acid transport system, permease and periplasmic component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096404|gb|ABJ61555.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 480 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 52/142 (36%), Positives = 82/142 (57%), Gaps = 1/142 (0%) Query: 62 VWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 ++IFRG PL+V F I+ GLP IG +F A +I+L LN AY +R ++ KG Sbjct: 322 IYIFRGLPLMVLAFFIYIGLPGVIGTKIPAFTAGLITLILNEGAYTGAFVRGGFEAVDKG 381 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++G T +++R +I+PQ + ++FI LK TS+ S I I E+ QT Sbjct: 382 QMEAARSLGFTYNRSMRKVIMPQGLKIMVPSFINQFIITLKDTSILSAIGILELTQTGTL 441 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 IVS Q ++ +A +YL++ Sbjct: 442 IVSRNSQGFRVWAIVAVIYLVV 463 >gi|15800368|ref|NP_286380.1| glutamate/aspartate transport system permease [Escherichia coli O157:H7 EDL933] gi|15829947|ref|NP_308720.1| glutamate/aspartate transport system permease [Escherichia coli O157:H7 str. Sakai] gi|168752224|ref|ZP_02777246.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4113] gi|168758297|ref|ZP_02783304.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4401] gi|168764669|ref|ZP_02789676.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4501] gi|168767101|ref|ZP_02792108.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4486] gi|168777605|ref|ZP_02802612.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4196] gi|168779145|ref|ZP_02804152.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4076] gi|168786504|ref|ZP_02811511.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC869] gi|168802436|ref|ZP_02827443.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC508] gi|195939392|ref|ZP_03084774.1| glutamate/aspartate transport system permease [Escherichia coli O157:H7 str. EC4024] gi|208809108|ref|ZP_03251445.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4206] gi|208815017|ref|ZP_03256196.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4045] gi|208822912|ref|ZP_03263230.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4042] gi|209397185|ref|YP_002269289.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4115] gi|217326418|ref|ZP_03442502.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. TW14588] gi|254791818|ref|YP_003076655.1| glutamate and aspartate ABC transporter membrane protein [Escherichia coli O157:H7 str. TW14359] gi|261224123|ref|ZP_05938404.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261257817|ref|ZP_05950350.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK966] gi|291281604|ref|YP_003498422.1| Glutamate/aspartate ABC transporter permease protein GltJ [Escherichia coli O55:H7 str. CB9615] gi|12513561|gb|AAG54988.1|AE005244_6 glutamate/aspartate transport system permease [Escherichia coli O157:H7 str. EDL933] gi|13360151|dbj|BAB34116.1| glutamate/aspartate transport system permease [Escherichia coli O157:H7 str. Sakai] gi|187767198|gb|EDU31042.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4196] gi|188013879|gb|EDU52001.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4113] gi|189002687|gb|EDU71673.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4076] gi|189354852|gb|EDU73271.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4401] gi|189363462|gb|EDU81881.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4486] gi|189365367|gb|EDU83783.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4501] gi|189373635|gb|EDU92051.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC869] gi|189375565|gb|EDU93981.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC508] gi|208728909|gb|EDZ78510.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4206] gi|208731665|gb|EDZ80353.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4045] gi|208737105|gb|EDZ84789.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4042] gi|209158585|gb|ACI36018.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4115] gi|209776918|gb|ACI86771.1| glutamate/aspartate transport system permease [Escherichia coli] gi|209776920|gb|ACI86772.1| glutamate/aspartate transport system permease [Escherichia coli] gi|209776922|gb|ACI86773.1| glutamate/aspartate transport system permease [Escherichia coli] gi|209776924|gb|ACI86774.1| glutamate/aspartate transport system permease [Escherichia coli] gi|209776926|gb|ACI86775.1| glutamate/aspartate transport system permease [Escherichia coli] gi|217322639|gb|EEC31063.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. TW14588] gi|254591218|gb|ACT70579.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|290761477|gb|ADD55438.1| Glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O55:H7 str. CB9615] gi|320193060|gb|EFW67700.1| Glutamate Aspartate transport system permease protein GltJ [Escherichia coli O157:H7 str. EC1212] gi|320638105|gb|EFX07869.1| Glutamate/aspartate ABC transporter permease protein GltJ [Escherichia coli O157:H7 str. G5101] gi|320643509|gb|EFX12679.1| Glutamate/aspartate ABC transporter permease protein GltJ [Escherichia coli O157:H- str. 493-89] gi|320648844|gb|EFX17471.1| Glutamate/aspartate ABC transporter permease protein GltJ [Escherichia coli O157:H- str. H 2687] gi|320654428|gb|EFX22475.1| Glutamate/aspartate ABC transporter permease protein GltJ [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660110|gb|EFX27640.1| Glutamate/aspartate ABC transporter permease protein GltJ [Escherichia coli O55:H7 str. USDA 5905] gi|320664908|gb|EFX32043.1| Glutamate/aspartate ABC transporter permease protein GltJ [Escherichia coli O157:H7 str. LSU-61] gi|326341404|gb|EGD65196.1| Glutamate Aspartate transport system permease protein GltJ [Escherichia coli O157:H7 str. 1044] gi|326345816|gb|EGD69555.1| Glutamate Aspartate transport system permease protein GltJ [Escherichia coli O157:H7 str. 1125] Length = 246 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 118/214 (55%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ ++G F ++R + +S + YV +FR PL+VQ F Sbjct: 25 IWSGFQVTIALSICAWIIAFLVGSFFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F + F++ ++ L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQASKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+ + +F ++ +E V Sbjct: 204 YSAHAWESFTAITLAYVFINAFIMLVMTLVERKV 237 >gi|16759798|ref|NP_455415.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142429|ref|NP_805771.1| arginine transporter permease ArtM [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161614847|ref|YP_001588812.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168230795|ref|ZP_02655853.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168240769|ref|ZP_02665701.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168466506|ref|ZP_02700368.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819948|ref|ZP_02831948.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443230|ref|YP_002040126.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450010|ref|YP_002044918.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469096|ref|ZP_03075080.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197263817|ref|ZP_03163891.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198242631|ref|YP_002214852.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389807|ref|ZP_03216418.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929999|ref|ZP_03221020.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205352137|ref|YP_002225938.1| arginine transporter permease ArtM [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856320|ref|YP_002242971.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213022066|ref|ZP_03336513.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213052698|ref|ZP_03345576.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213428041|ref|ZP_03360791.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580629|ref|ZP_03362455.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213609526|ref|ZP_03369352.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213647862|ref|ZP_03377915.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|224582738|ref|YP_002636536.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|289825017|ref|ZP_06544380.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25296625|pir||AE0607 arginine transport system permease protein ArtM STY0921 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502091|emb|CAD05327.1| arginine transport system permease protein ArtM [Salmonella enterica subsp. enterica serovar Typhi] gi|29138059|gb|AAO69620.1| arginine transport system permease protein ArtM [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161364211|gb|ABX67979.1| hypothetical protein SPAB_02600 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401893|gb|ACF62115.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408314|gb|ACF68533.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194455460|gb|EDX44299.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195630950|gb|EDX49536.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197242072|gb|EDY24692.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197937147|gb|ACH74480.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602252|gb|EDZ00798.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320993|gb|EDZ06194.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205271918|emb|CAR36761.1| arginine transport system permease protein ArtM [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205334830|gb|EDZ21594.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339892|gb|EDZ26656.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343002|gb|EDZ29766.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206708123|emb|CAR32416.1| arginine transport system permease protein ArtM [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467265|gb|ACN45095.1| arginine transport system permease protein ArtM [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|320085162|emb|CBY94949.1| L-cystine transport system permease protein tcyB [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322713919|gb|EFZ05490.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|326622605|gb|EGE28950.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627180|gb|EGE33523.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 222 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 121/220 (55%), Gaps = 18/220 (8%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ P+LL + +L + S ++L++ +I + ++ L+ Y+ +F GT Sbjct: 1 MLEYLPELL-KGLHTSLTLTVASIAVALVLALVFTIILTLKTPFVVWLV-RGYITLFTGT 58 Query: 69 PLLVQLFVIFYG------------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 PLLVQ+F+I+YG L H+ + + ++ +I+L+LN +AY +++ +I + Sbjct: 59 PLLVQIFLIYYGPGQFPTLQEYPLLWHL--LSEPWLCALIALSLNSAAYTTQLFYGAIRA 116 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQW + A+G+++K T+ I+LP + S+E + + KSTS+A TIT+ E+ Sbjct: 117 IPEGQWQSCGALGMSKKDTL-AILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMG 175 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 +Q + TY ++++ +YL++ ++ IE Sbjct: 176 YSQLLYGRTYD-VVVFGAAGVIYLVVNGLLTLMMRLIERK 214 >gi|116750585|ref|YP_847272.1| polar amino acid ABC transporter inner membrane subunit [Syntrophobacter fumaroxidans MPOB] gi|116699649|gb|ABK18837.1| polar amino acid ABC transporter, inner membrane subunit [Syntrophobacter fumaroxidans MPOB] Length = 240 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 118/227 (51%), Gaps = 12/227 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++W L + ++L + T+ ++ +++ I+L +G IA+ RI L+ Y Sbjct: 5 DFDWSVLWRHPYGKMLLQGVWTTVHLSLLAWAIALPVGVAIALCRIMPCRAA-RLVGGAY 63 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI----------GIVFD-SFVAIIISLTLNFSAYISEII 110 V R PLLVQLF ++ +P + V D S+V +++L +A ++E + Sbjct: 64 VETLRNIPLLVQLFFWYFAVPSLLPGKTERWLYANVRDLSYVLGVLALGTYTAARVAEAV 123 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 RS ++++P GQ+ A+ + GL+ T RH+ILP + LS+EF++ K++S+A TI Sbjct: 124 RSGLLAVPAGQFRAALSTGLSPAGTYRHVILPYALRVVIPLLSTEFLTCFKNSSLAMTIG 183 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + E A I S T+ L + VYL+ + ++ +IES + Sbjct: 184 VMETTGMANYIDSFTFHGLETTTAASLVYLLTSLSVIVLMGRIESKM 230 >gi|159037031|ref|YP_001536284.1| polar amino acid ABC transporter, inner membrane subunit [Salinispora arenicola CNS-205] gi|157915866|gb|ABV97293.1| polar amino acid ABC transporter, inner membrane subunit [Salinispora arenicola CNS-205] Length = 235 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 124/229 (54%), Gaps = 23/229 (10%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +++ID F + +TL I ++ + +LI+G +AV+RI + + + YV IFR Sbjct: 2 SVLIDKF-DVFAGGFWLTLQICVLAAIGALILGTIVAVLRISPVPPLQA-VGTAYVNIFR 59 Query: 67 GTPLLVQLFVIFYGLPHIG------------IVFDS-------FVAIIISLTLNFSAYIS 107 PL + +F +GLP +G IVF F +I+L L +A++ Sbjct: 60 NMPLTIVMFFAAFGLPALGSNADFLRIPGLDIVFSRLGTDLPYFRFGLIALVLYTAAFVC 119 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E +RS + ++P GQ +A+ ++GLT Q +RH++LPQ+ S VPL S I+++K++++ Sbjct: 120 EALRSGVNAVPAGQAEAARSLGLTFTQNLRHVVLPQSWAASVVPLGSVIIAMIKNSALIG 179 Query: 168 TIT-IPEIFQTAQRIVSTTYQPLI-IYCELAFVYLILTSFCYIIQIKIE 214 + ++ QTA ++ S +P I + ++ YLI+T ++ +IE Sbjct: 180 FFGVVGDLSQTADQLTSAGGEPFIPVAIGISIGYLIMTVPLGVLLDRIE 228 >gi|153952019|ref|YP_001398496.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter jejuni subsp. doylei 269.97] gi|152939465|gb|ABS44206.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. doylei 269.97] Length = 233 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 20/200 (10%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I+ P L AA +T+ ++ + SLIIG F ++ +F I+ I Y+ Sbjct: 3 FDFILAQAPAFLTAA-WLTIKLSFFGIIFSLIIGLF-CILMSYFKIKILENICKLYIEFS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD------------------SFVAIIISLTLNFSAYIS 107 R TPLL+QLF ++Y LP I + SF I+ L+ +Y++ Sbjct: 61 RNTPLLIQLFFLYYALPKFNIHLEQIPPLSLICLSVEETLIPSFACAIVGLSFLGGSYMA 120 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E +R+ +I K Q++A ++G ++ +R++ILPQ + S +S+ I ++K TSV S Sbjct: 121 ESLRAGFEAIRKHQFEAGLSLGFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVS 180 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I +P++ + + S TY+ Sbjct: 181 IIALPDLVNLMKSLNSLTYK 200 >gi|88596920|ref|ZP_01100156.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 84-25] gi|218562122|ref|YP_002343901.1| amino-acid ABC transporter integral membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|88190609|gb|EAQ94582.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 84-25] gi|112359828|emb|CAL34615.1| amino-acid ABC transporter integral membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925734|gb|ADC28086.1| amino-acid ABC transporter integral membrane protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315928204|gb|EFV07521.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929759|gb|EFV08929.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni 305] Length = 233 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 20/200 (10%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I+ P L AA +T+ ++ + SLIIG F ++ +F I+ I Y+ Sbjct: 3 FDFILAQAPAFLTAA-WLTIKLSFFGIIFSLIIGLF-CILMSYFKIKILENICKLYIEFS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD------------------SFVAIIISLTLNFSAYIS 107 R TPLL+QLF ++Y LP I + SF I+ L+ +Y++ Sbjct: 61 RNTPLLIQLFFLYYALPKFNIHLEQIPPLDLICLSVEETLRPSFACAIVGLSFLGGSYMA 120 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E +R+ +I K Q++A ++G ++ +R++ILPQ + S +S+ I ++K TSV S Sbjct: 121 ESLRAGFEAIRKQQFEAGLSLGFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVS 180 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I +P++ + + S TY+ Sbjct: 181 IIALPDLVNLMKSLNSLTYK 200 >gi|270261142|ref|ZP_06189415.1| transporter [Serratia odorifera 4Rx13] gi|270044626|gb|EFA17717.1| transporter [Serratia odorifera 4Rx13] Length = 222 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 113/201 (56%), Gaps = 13/201 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG--- 80 +L + + +++L++ + VI + I++ ++ Y+ +F GTPLLVQ+F+I+YG Sbjct: 15 SLTLTITALIVALVLSLLLTVI-LTLKTPILTPLVKIYITLFTGTPLLVQIFLIYYGPGQ 73 Query: 81 LPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 P I ++ ++ +I+L LN +AY +++ ++ +IP GQW + A+G++R Sbjct: 74 FPAIREYPWLWNLLSQPWLCAMIALALNSAAYTTQLFYGAVRAIPAGQWQSCEALGMSRS 133 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q++R I+LP + S+E + + KSTS+A TIT+ E+ +Q + TY ++++ Sbjct: 134 QSLR-ILLPFAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQLMYGRTYD-VMVFG 191 Query: 194 ELAFVYLILTSFCYIIQIKIE 214 VYL + ++ +E Sbjct: 192 AAGLVYLCVNGLLTLLMRIVE 212 >gi|298346993|ref|YP_003719680.1| amino acid ABC transporter membrane protein [Mobiluncus curtisii ATCC 43063] gi|304389300|ref|ZP_07371265.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298237054|gb|ADI68186.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii ATCC 43063] gi|304327418|gb|EFL94651.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 217 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 54/171 (31%), Positives = 99/171 (57%), Gaps = 5/171 (2%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS----FVAIIISLTLNFSAYISEI 109 ++ I+ FY+ I RGTPL++QL V+++G ++ V S F A II+ ++N++AY +EI Sbjct: 46 LNWIVQFYISIMRGTPLMLQLMVVYFGPYYLFKVPISASYNFWAAIIAFSVNYAAYFAEI 105 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +IP+GQ +A++ +G ++++T I LPQ T +++E I+++K TS+A I Sbjct: 106 YRGGFQAIPQGQTEAAFVLGYSQQRTFYTIKLPQMFRTVLPSITNEVITLVKDTSLAQVI 165 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + E+F A+ STT + + Y + + K+E V+++ Sbjct: 166 SFLEMFSIAREYASTT-ASMAPFVAAGIFYYVFNMVVAVTMNKLEKRVSKY 215 >gi|315619868|gb|EFV00387.1| arginine transport system permease protein artM [Escherichia coli 3431] gi|332768032|gb|EGJ98218.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella flexneri 2930-71] Length = 214 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 114/205 (55%), Gaps = 17/205 (8%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG--- 80 +L + S +++LI+ +I + ++ L+ Y+ +F GTPLLVQ+F+I+YG Sbjct: 7 SLTLTVASLIVALILALIFTIILTLKTPVLVWLV-RGYITLFTGTPLLVQIFLIYYGPGQ 65 Query: 81 ---------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 L H+ + + ++ +I+L+LN +AY +++ +I +IP+GQW + A+G++ Sbjct: 66 FPTLQEYPALWHL--LSEPWLCALIALSLNSAAYTTQLFYGAIRAIPEGQWQSCSALGMS 123 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 +K T+ I+LP S S+E + + KSTS+A TIT+ E+ +Q + TY +++ Sbjct: 124 KKDTL-AILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMGYSQLLYGRTYD-VMV 181 Query: 192 YCELAFVYLILTSFCYIIQIKIESS 216 + +YL++ ++ IE Sbjct: 182 FGAAGIIYLVVNGLLTLMMRLIERK 206 >gi|323526411|ref|YP_004228564.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323383413|gb|ADX55504.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 218 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 110/203 (54%), Gaps = 4/203 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++ ++++ + P LL A + L I +++G ++R + + I Sbjct: 1 MQFD-ISIVVAALPALLQGARLTVL-ITIAGLTGGVLVGLLFGLMRAY-GNAPCQKIAFA 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV RGTP++VQ+ I++ LP + + D+ A I S+ +N AYI+EI+R S +S+P+ Sbjct: 58 YVEFVRGTPIVVQVMFIYFALPMLLNVRVDALTAAIASIVINSGAYIAEIVRGSFLSVPR 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G +A A+G+ + + ++ P I L ++FI LK TS+ I + E+ + Q Sbjct: 118 GLKEAGLALGMPAWRVLAFVVGPVAIRRMTPALGNQFIVSLKDTSLFIVIGVGELTRQGQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 I+++ ++ + I+ +A +YL + Sbjct: 178 EIMASNFRAVEIWTAVAALYLCM 200 >gi|262403071|ref|ZP_06079631.1| ABC-type amino acid transport system permease component [Vibrio sp. RC586] gi|262350570|gb|EEY99703.1| ABC-type amino acid transport system permease component [Vibrio sp. RC586] Length = 265 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 49/140 (35%), Positives = 89/140 (63%), Gaps = 3/140 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQ++++++ P IG+ D F +++L L AY +E+ R + SIP+ Sbjct: 103 YIAVVRNTPLLVQIYLLYFVFGPVIGL--DRFATAVLALALFQGAYTAEVFRGGLNSIPQ 160 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ ++GL+R T +ILPQ + + PL++E +S++K++S+ S + I ++ + Sbjct: 161 GQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGR 220 Query: 180 RIVSTTYQPLIIYCELAFVY 199 IVS T P I+ +A +Y Sbjct: 221 NIVSETAMPFEIWFSVAAIY 240 >gi|146278102|ref|YP_001168261.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17025] gi|145556343|gb|ABP70956.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17025] Length = 221 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 48/123 (39%), Positives = 71/123 (57%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 R P LV L I+ GLP G+ F A+ ++ LN SAY +EI R+ I S+P GQ +A Sbjct: 68 LRALPPLVLLIFIYSGLPFAGLAISPFAAVAVAFFLNNSAYYAEIYRAGIQSVPTGQTEA 127 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A GLT QT+ H++LPQ + L S + ++K TS+AS +++ E+ +A S Sbjct: 128 ARACGLTTGQTLAHVVLPQAVRNVLPDLLSNTVEVVKLTSLASVVSLAELLYSANMARSL 187 Query: 185 TYQ 187 TY Sbjct: 188 TYN 190 >gi|281491440|ref|YP_003353420.1| amino acid ABC transporter permease [Lactococcus lactis subsp. lactis KF147] gi|281375158|gb|ADA64671.1| Amino acid ABC transporter, permease protein [Lactococcus lactis subsp. lactis KF147] Length = 295 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 13/160 (8%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI--------GIVFD-----SFVAIIISLT 99 I++ + +V RGTP+LVQL++ + G+P I G F+ + + +I++ Sbjct: 93 ILNQLRALFVSFIRGTPILVQLYLSYTGIPLILKAINMNYGTNFNVNTIPAMLFVIVAFA 152 Query: 100 LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISI 159 LN AY SE IR++I S+ KGQ +A+ ++G+T Q + LP+ T + PL + I + Sbjct: 153 LNEGAYNSETIRAAIQSVDKGQIEAAKSLGMTNFQVFMRVTLPEAATVATAPLGNALIGL 212 Query: 160 LKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 LKSTS+A + E+ AQ I +T++ Y LA VY Sbjct: 213 LKSTSLAFVAGVVEMTARAQIIGGSTFRLFETYLALALVY 252 >gi|251792009|ref|YP_003006729.1| arginine transporter permease subunit ArtM [Aggregatibacter aphrophilus NJ8700] gi|247533396|gb|ACS96642.1| arginine transport system permease protein [Aggregatibacter aphrophilus NJ8700] Length = 227 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 59/168 (35%), Positives = 98/168 (58%), Gaps = 10/168 (5%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEI 109 + Y+ +F GTPLLVQ F+I+ G V DS + ++L LN +AY +++ Sbjct: 50 NLYLTLFTGTPLLVQFFLIYAGPGQFQWVVDSPLWSLFSNAWFCAALALALNSAAYSTQL 109 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 ++ +IPKGQW++ A+GL+R QT++ I++P + + S+E I + K T++ASTI Sbjct: 110 FHGAVKAIPKGQWESCAALGLSRLQTLK-ILIPYALKRALPSYSNEIILVFKGTALASTI 168 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 TI +I A+++ T Y L IY +YLI+T ++ K+E+ V Sbjct: 169 TIMDIMGYARQLYGTEYDALTIYGIAGGIYLIITGIATLLLRKLENRV 216 >gi|295835695|ref|ZP_06822628.1| glutamate permease [Streptomyces sp. SPB74] gi|197698111|gb|EDY45044.1| glutamate permease [Streptomyces sp. SPB74] Length = 214 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 111/205 (54%), Gaps = 10/205 (4%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI--FRGTPLLVQLFVIFYGL 81 TL + + +++L++GF +A R+ + SL + W+ R TPL + F + GL Sbjct: 18 TLELTVYASLLALVLGFVMASFRV---APVGSLRVFGTAWVTVLRNTPLTLLFFAVLLGL 74 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 P G+V + +++L SA+I E +RS I ++PKGQ +A+ ++G++ QT+ +IL Sbjct: 75 PRFGLVLPFQLFAVLALGCYTSAFICEALRSGINTVPKGQGEAARSLGMSFGQTLTAVIL 134 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ + P+ S+ I++ K++++A ++ E+ T + + + + ++ +A YL+ Sbjct: 135 PQAFRSVIPPVGSQLIALAKNSAIAGAFSVTELLGTYKTLNELGFDIVWVFVWIAVGYLL 194 Query: 202 LTSFCYIIQIKIESSVTQHTYSVDK 226 LT + I + +H + V + Sbjct: 195 LT-----LAISALFNYLEHRWGVSR 214 >gi|116334030|ref|YP_795557.1| ABC-type amino acid transport system, permease component [Lactobacillus brevis ATCC 367] gi|116099377|gb|ABJ64526.1| ABC-type amino acid transport system, permease component [Lactobacillus brevis ATCC 367] Length = 229 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 105/189 (55%), Gaps = 7/189 (3%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 S PQ+L + + +T+ + ++F ++ I G + + ++ + L Y+ RG P+ Sbjct: 18 SSIPQIL-SGLPMTIFLTVMAFGLATIWGMLLTLAQLSHVRVLHGL-ARAYISFMRGVPM 75 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LV LF++++G + A IIS TL +A++SE+ RS+ + I GQ++A+Y+IGL Sbjct: 76 LVVLFIVYFGFG-----LTAVPAAIISFTLGAAAFVSEVFRSAFLGIDHGQYEAAYSIGL 130 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 ++ +R II+PQ S L + + + K TS+A+ IT+ ++F A+ + + Sbjct: 131 PYRKVMRFIIIPQAFRISIPALGNILLDMFKGTSLAAMITVTDMFMQAKIVAGANQDYMT 190 Query: 191 IYCELAFVY 199 IY +A +Y Sbjct: 191 IYITIAILY 199 >gi|91787333|ref|YP_548285.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91696558|gb|ABE43387.1| amino acid ABC transporter membrane protein, PAAT family [Polaromonas sp. JS666] Length = 216 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 110/197 (55%), Gaps = 16/197 (8%) Query: 13 FPQLLYAA---IVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLIMHFYVWIF 65 P LL A I+VTL S ++S ++G AV+R+ ++ ++I + Sbjct: 12 MPILLQGAWLTILVTLG----SLLLSTMLGLVWAVMRVSGIPLLANASAAVIN-----LL 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG P++V LF +++ +P +GI + A I+ L + +SAY +E R+ I ++ GQ +A+ Sbjct: 63 RGIPIIVILFFLYFVMPDVGISLSALQAGILGLGIAYSAYQAENFRAGIEAVDHGQVEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G++ +R ++LPQ + P + I +LK +S ASTIT+ E+ + I ++T Sbjct: 123 RAMGMSWGLMMRRVVLPQAVKIVLPPYGNIMIMMLKDSSQASTITVAELALQGKMIATST 182 Query: 186 YQPLIIYCELAFVYLIL 202 +Q ++ +A +YL++ Sbjct: 183 FQNATVFTLVALIYLVM 199 >gi|227890645|ref|ZP_04008450.1| glutamine-binding protein / glutamine transport system permease protein [Lactobacillus salivarius ATCC 11741] gi|227867583|gb|EEJ75004.1| glutamine-binding protein / glutamine transport system permease protein [Lactobacillus salivarius ATCC 11741] Length = 485 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 103/184 (55%), Gaps = 8/184 (4%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIF---FSDTIISLIMHFYVWIFRGTPLLVQLFV 76 IV TL + + + + I G I ++ + F+ I + I ++IFRG PLLV Sbjct: 286 GIVETLKLTVVGIIGATIFGILIGMLGVVPNKFAQGISTTI----IYIFRGLPLLVLALF 341 Query: 77 IFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+ G+P + G +F+A II+LTLN AY + ++ I ++ KGQ +A+ ++GL+ ++ Sbjct: 342 IYNGIPSLTGSKIPAFIAGIITLTLNEGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKS 401 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R +ILPQ + ++FI LK TS+ S I I E+ QT + I++ + I+ + Sbjct: 402 MRKVILPQGVKIMIPSFINQFIITLKDTSILSIIGILELTQTGKIIIARNLEGFRIWGII 461 Query: 196 AFVY 199 A +Y Sbjct: 462 AIMY 465 >gi|310766982|gb|ADP11932.1| Glutamate/aspartate transport system permease [Erwinia sp. Ejp617] Length = 245 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 115/214 (53%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++ +++I+L +G F ++R ++S + YV +FR PL+VQ F+ Sbjct: 25 LWSGFQVTIAVSVCAWIIALCVGSFFGILRTV-PGRLLSSLGTCYVELFRNVPLIVQFFI 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F S F +I L L +A + E +R++I S+P GQ + Sbjct: 84 WYLVVPELLPEDIGMWFKSEIDPNIQFFTCSVICLGLFTAARVCEQVRAAIQSLPGGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+ + + ++ +E V Sbjct: 204 YSAHAYESFSAITLAYVAINAVIMLLMGLVERKV 237 >gi|168334973|ref|ZP_02693091.1| polar amino acid ABC transporter, inner membrane subunit [Epulopiscium sp. 'N.t. morphotype B'] Length = 235 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 112/218 (51%), Gaps = 33/218 (15%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSD--------TIISLIMHFYVWIFRGTPLLVQLF 75 TL ++ I+ +I L IG +AVI + S ++ +I YV I RGTP +VQ+ Sbjct: 30 TLLLSLIATIIGLAIGLVVAVIGMLESKGTIENSILKVLKIIAKVYVDIIRGTPAVVQVS 89 Query: 76 VIFY------GLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 ++ LP + GI F +N AY+SE+IR I SI +GQ +A Sbjct: 90 FLWLVVLAPLNLPRVMVGGIAFG----------INSGAYMSEVIRGGITSIDRGQTEAGR 139 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ QT+ IILPQ L +EFI+++K T++ I ++ + A ++STTY Sbjct: 140 SLGLSYFQTMHLIILPQAFRQMLPSLVNEFINLIKETAIIGFIGGMDLMKAANILISTTY 199 Query: 187 Q---PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 PLI+ +A +YL +TS IE+ +++ Sbjct: 200 NFEIPLIM---VALIYLTITSILTYFMRGIENKLSKQN 234 >gi|55378504|ref|YP_136354.1| glutamine ABC transporter permease [Haloarcula marismortui ATCC 43049] gi|55231229|gb|AAV46648.1| glutamine ABC transporter permease protein [Haloarcula marismortui ATCC 43049] Length = 226 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 56/191 (29%), Positives = 101/191 (52%), Gaps = 6/191 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 LL VT+ + S ++ ++GF + ++ + + V + RGTPLLV + Sbjct: 18 DLLLVGTGVTVALTATSILLGFLLGFPAGAVEVYGRGPLKRAVETAGV-VLRGTPLLVII 76 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 ++F+GL + +FV I+L L +AY S+I R ++ S+ +GQ +A+ A+G+ R Q Sbjct: 77 ILLFFGLS---VSSSAFVTATIALGLRSAAYQSQIFRGALQSVDEGQLEAARAVGMGRLQ 133 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI--VSTTYQPLIIY 192 IR +++PQ + S +EF +LK TS+A I + E+ Q + + L I+ Sbjct: 134 AIRSVVVPQALRRSVPGFQNEFTIVLKDTSIAIVIGLGELLTIGQNLYQGGQSTAALEIF 193 Query: 193 CELAFVYLILT 203 ++ +Y +LT Sbjct: 194 LTVSLIYFVLT 204 >gi|258623749|ref|ZP_05718708.1| polar amino acid ABC transporter, permease protein [Vibrio mimicus VM603] gi|258583967|gb|EEW08757.1| polar amino acid ABC transporter, permease protein [Vibrio mimicus VM603] Length = 265 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 49/140 (35%), Positives = 89/140 (63%), Gaps = 3/140 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQ++++++ P IG+ D F +++L L AY +E+ R + SIP+ Sbjct: 103 YIAVVRNTPLLVQIYLLYFVFGPVIGL--DRFATAVLALALFQGAYTAEVFRGGLNSIPQ 160 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ ++GL+R T +ILPQ + + PL++E +S++K++S+ S + I ++ + Sbjct: 161 GQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGR 220 Query: 180 RIVSTTYQPLIIYCELAFVY 199 IVS T P I+ +A +Y Sbjct: 221 NIVSETAMPFEIWFSVAAIY 240 >gi|229522563|ref|ZP_04411979.1| amino acid ABC transporter permease protein [Vibrio cholerae TM 11079-80] gi|229340548|gb|EEO05554.1| amino acid ABC transporter permease protein [Vibrio cholerae TM 11079-80] Length = 266 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 49/140 (35%), Positives = 90/140 (64%), Gaps = 3/140 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQ++++++ P IG+ D F +++LTL AY +E+ R + SI + Sbjct: 104 YIAVVRNTPLLVQIYLLYFVFGPVIGL--DRFATAVLALTLFQGAYTAEVFRGGLNSIAQ 161 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A++++GL+R T +ILPQ + + PL++E +S++K++S+ S + I ++ + Sbjct: 162 GQYEAAHSLGLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGR 221 Query: 180 RIVSTTYQPLIIYCELAFVY 199 IVS T P I+ +A +Y Sbjct: 222 NIVSETAMPFEIWFSVAAIY 241 >gi|288550054|ref|ZP_05969126.2| glutamate/aspartate ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] gi|288316572|gb|EFC55510.1| glutamate/aspartate ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] Length = 250 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 54/213 (25%), Positives = 118/213 (55%), Gaps = 14/213 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++ +++I+ +IG ++R + +S + YV +FR PL+VQ F Sbjct: 29 LWSGFQVTVALSITAWIIAFLIGSLFGILRTV-PNRFLSSLGTLYVELFRNVPLIVQFFT 87 Query: 77 IFYGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P +IG+ F + FV+ ++ L L +A + E +R++I S+P+GQ + Sbjct: 88 WYLVIPELLPENIGMWFKAELDPNVQFFVSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 147 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 148 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 207 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 + + + Y+++ +F ++ +E Sbjct: 208 YSAHAWESFTAITLAYVLINAFIMLVMNLVERK 240 >gi|205353468|ref|YP_002227269.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205273249|emb|CAR38212.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628560|gb|EGE34903.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 228 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 108/214 (50%), Gaps = 12/214 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V++++IG A ++ + + LI Y + RG P L Sbjct: 4 GFSGVILQGAIVTLELALSSVVLAVLIGLVGAGAKLS-QNRVTGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP-HIGIVFDSF----------VAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL + +V DS VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNVVTDSLGIDQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G T QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTHGQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 +T++P +YL+ T+ + + +E Sbjct: 183 AGKSTWEPFYFAVVCGLIYLVFTTVSNGVLLLLE 216 >gi|49474282|ref|YP_032324.1| ABC transporter, permease protein [Bartonella quintana str. Toulouse] gi|49239786|emb|CAF26176.1| ABC transporter, permease protein [Bartonella quintana str. Toulouse] Length = 239 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 111/204 (54%), Gaps = 21/204 (10%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFF--SD-TIISLIMHFYVWIFRGTPLLVQ 73 L A + ++L + C I+GF + ++ SD I+ I + +FRG P L+ Sbjct: 21 LSAGMTLSLALCCG------ILGFPLGLLSALMIRSDIKIVKAIATLFSSVFRGLPELLT 74 Query: 74 LFVIFYGLP----------HIGIVF--DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 LF+++YGL +I I+F ++F+A +++L++ +A+ E+ + KGQ Sbjct: 75 LFLVYYGLQKIIQTVLDYFNIEIIFSINAFIAGVLALSMVLAAFSCEVWLGAFNIFDKGQ 134 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++A+ A+G +R T I+ PQ I + LS+ ++++LK TS+ STI++ ++ Q Sbjct: 135 YEAAKALGFSRSTTFFRIVFPQLIRNALPGLSNNWLTLLKDTSLVSTISLVDLMQQTNLA 194 Query: 182 VSTTYQPLIIYCELAFVYLILTSF 205 V+ T +P++ Y +YL+ + F Sbjct: 195 VAATNEPMLFYLVACLLYLLFSGF 218 >gi|332163539|ref|YP_004300116.1| ABC transporter permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667769|gb|ADZ44413.1| ABC transporter permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 245 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 107/203 (52%), Gaps = 29/203 (14%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWI 64 L+ + L+ ++TL I+ + V S ++GF +A R D+ + + F Y + Sbjct: 10 LLAPQYLGWLWHGFLLTLWISACTVVASTLLGFLLAAAR----DSELKGLQWFAIGYSTL 65 Query: 65 FRGTPLLVQLFVIFYGL--------------PH--------IGIVFDSFVAIIISLTLNF 102 FR TPLL+QLF ++ PH +G F+A I LT Sbjct: 66 FRNTPLLIQLFFWYFAASQFLPASWIPWLNTPHEITFFGLTLGWPSFEFLAGFIGLTCYS 125 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +A+I+E +RS I + KGQ A++A+GLT Q +RH++LPQ + + PL ++++I+K+ Sbjct: 126 TAFIAEELRSGISGVAKGQKYAAHALGLTGWQAMRHVVLPQALKIAMPPLLGQYMNIIKN 185 Query: 163 TSVASTITIPEIFQTAQRIVSTT 185 +S+A I + E+ ++++ + T Sbjct: 186 SSLAMAIGVAELSYASRQVETET 208 >gi|167571225|ref|ZP_02364099.1| hypothetical protein BoklC_15392 [Burkholderia oklahomensis C6786] Length = 246 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 108/201 (53%), Gaps = 17/201 (8%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ +++I+L++G V+R + +S I YV IFR PL+VQ FV Sbjct: 26 LMSGFWVTVKVSLAAWLIALVVGSLFGVLRTV-PNKWLSAIGTVYVSIFRNIPLIVQFFV 84 Query: 77 IFYGLPHI--------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + +P + G F F A I+ L L A + E +RS I ++P+GQ Sbjct: 85 WYLVVPELLPASIGTWIKQLPPGTQF--FTASIVCLGLFTGARVCEQVRSGINALPRGQR 142 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 143 AAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLV 202 Query: 183 STTYQPLIIYCELAFVYLILT 203 T Q + + Y+I+ Sbjct: 203 DYTAQTYESFIAVTLAYVIIN 223 >gi|296390282|ref|ZP_06879757.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1] Length = 248 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 58/175 (33%), Positives = 101/175 (57%), Gaps = 15/175 (8%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A + T+ IA + ++I+L +G + V+R + ++S + YV IFR PLLVQLF+ + Sbjct: 27 AGLGWTIAIALVGWIIALALGSLLGVMRTV-PNRLVSGLATAYVEIFRNVPLLVQLFIWY 85 Query: 79 YGLPHI---GI----------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 + +P + G+ +++++++ L L +A + E +R+ I ++P GQ A+ Sbjct: 86 FLVPDLLPEGLQTWFKQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQALPYGQTSAA 145 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 A+G Q RH++LPQ PL+SEF++I K++SVAS I + E+ QT Q Sbjct: 146 RAMGFRLPQIYRHVLLPQAFRIIIPPLTSEFLNIFKNSSVASLIGLMELLAQTKQ 200 >gi|317047372|ref|YP_004115020.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316948989|gb|ADU68464.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 218 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 100/174 (57%), Gaps = 6/174 (3%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFD 89 FVI L+ G A I I +V + RGTP++VQ+ I++ LP + I D Sbjct: 33 GFVIGLLAGTCRA-----LGGRITKTISLIFVELIRGTPIMVQVMFIYFALPMVLPIRID 87 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 A I+++ +N AYI+EI R +I+SI KG +AS A+GL+++ T+ ++I+P + Sbjct: 88 PVSAAIVTIIINSGAYIAEITRGAILSINKGFKEASLAMGLSQRSTLWYVIMPLALRRMI 147 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +++I +K TS+ I + E+ + Q I++ ++ L ++ +A +YL++T Sbjct: 148 PALGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEVWTAVALIYLLVT 201 >gi|224499026|ref|ZP_03667375.1| hypothetical protein LmonF1_04713 [Listeria monocytogenes Finland 1988] Length = 235 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 113/218 (51%), Gaps = 18/218 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 A++ T+P+ ++ GF IA+ IR++ + I FYV FR TP ++ + Sbjct: 14 AMLKTIPLTLAMTFFPILFGFIIAIGLTLIRMYHVR-FLEPIAKFYVSFFRSTPAILHIM 72 Query: 76 VIFYGLP----------HIGIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +I+ G+P +GI + V +II+L+ AY++EI+RS II++ GQ Sbjct: 73 LIYLGIPLLVDFLSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQM 132 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+Y++G T Q+IR ++LPQ + ++ I L +TS+A+ + +PEI A + Sbjct: 133 EAAYSVGYTHGQSIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVA 192 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S Y L + A +Y LT I +E ++ ++ Sbjct: 193 SDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKY 230 >gi|171321020|ref|ZP_02910007.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171093717|gb|EDT38861.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 246 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 64/199 (32%), Positives = 107/199 (53%), Gaps = 13/199 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ +++VI+LI+G V+R + +S I YV IFR PL+VQ FV Sbjct: 26 LMSGFWVTIEVSLVAWVIALIVGSLFGVLRTV-PNKWLSAIGTVYVSIFRNIPLIVQFFV 84 Query: 77 IFYGLPH-----IGIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + +P +G F A I+ L L A + E +RS I ++P GQ A Sbjct: 85 WYLVVPELLPASVGTWIKQLPPATQFFTASIVCLGLFTGARVCEQVRSGINALPTGQRAA 144 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 145 GLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDY 204 Query: 185 TYQPLIIYCELAFVYLILT 203 T Q + + Y+++ Sbjct: 205 TAQTYESFIAVTLAYVVIN 223 >gi|16764249|ref|NP_459864.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167992141|ref|ZP_02573239.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168263592|ref|ZP_02685565.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|16419396|gb|AAL19823.1| arginine 3rd transport system [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205329618|gb|EDZ16382.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205347683|gb|EDZ34314.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261246143|emb|CBG23946.1| arginine transport system permease protein ArtM [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992650|gb|ACY87535.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157470|emb|CBW16960.1| arginine transport system permease protein ArtM [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911915|dbj|BAJ35889.1| arginine ABC transporter permease protein ArtM [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223249|gb|EFX48318.1| Arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323129192|gb|ADX16622.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332987819|gb|AEF06802.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 222 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 121/218 (55%), Gaps = 14/218 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ P+LL + +L + S ++L++ +I + ++ L+ Y+ +F GT Sbjct: 1 MLEYLPELL-KGLHTSLTLTVASIAVALVLALVFTIILTLKTPFVVWLV-RGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPTLQEYPLLWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW + A+G+++K T+ I+LP + S+E + + KSTS+A TIT+ E+ + Sbjct: 119 EGQWQSCSALGMSKKDTL-AILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYS 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 Q + TY ++++ +YL++ ++ IE Sbjct: 178 QLLYGRTYD-VVVFGAAGVIYLVVNGLLTLMMRLIERK 214 >gi|184155294|ref|YP_001843634.1| ABC transporter permease component [Lactobacillus fermentum IFO 3956] gi|183226638|dbj|BAG27154.1| ABC transporter permease component [Lactobacillus fermentum IFO 3956] Length = 234 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 118/211 (55%), Gaps = 20/211 (9%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMHFYVWIFR 66 +DSF Q+ A VTL IA ++ V+ L++ +AV+R + I+++I+ F R Sbjct: 8 VDSFSQIASVA-PVTLLIAIVAAVVGLLLAILVAVVRERQVKGLAPIVAVIVSF----VR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLT---LNFSAYISEIIRSSI 114 GTP++VQL+V++YGLP + +V + A++I+ T LN A +SE IRS+ Sbjct: 63 GTPIIVQLYVVYYGLPQLLVVMKGWGWNTNPNGLPALVITFTAFSLNAMANLSESIRSAY 122 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ GQ++A+ A+G+T + I I++PQ I ++ F+ ++K T++ I I EI Sbjct: 123 HAVDYGQYEAAVAVGMTPLRAIIQIVVPQLIANLIPNFTNIFLDLIKDTALVYNIGIVEI 182 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSF 205 A I + ++ L Y + +Y+I+ F Sbjct: 183 MGEANIISAIGFKYLETYVDALIIYIIICWF 213 >gi|300698249|ref|YP_003748910.1| amino-acid ABC transporter protein [Ralstonia solanacearum CFBP2957] gi|299074973|emb|CBJ54542.1| putative amino-acid ABC transporter protein [Ralstonia solanacearum CFBP2957] Length = 230 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 1/145 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V RGTP L+ L + +Y +P + G+ A I +L N SAY+ EI+R ++ S+P Sbjct: 65 WVSAIRGTPALIHLLLAYYVVPPLLGLSISPLTAGIGALACNTSAYLVEILRGALSSVPD 124 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q A+ A+G+ Q RH++LPQ + PL+SEF +LK++S+ S I +PE+ A+ Sbjct: 125 AQRAAAQALGMREPQVWRHVLLPQVFYRAIPPLTSEFTILLKASSLLSIIAVPELATVAR 184 Query: 180 RIVSTTYQPLIIYCELAFVYLILTS 204 + PL ++ A VY ++ S Sbjct: 185 NASLQSDLPLQVFAMTAAVYFVILS 209 >gi|262164524|ref|ZP_06032262.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223] gi|262026904|gb|EEY45571.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223] Length = 265 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 49/140 (35%), Positives = 89/140 (63%), Gaps = 3/140 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQ++++++ P IG+ D F +++L L AY +E+ R + SIP+ Sbjct: 103 YIAVVRNTPLLVQIYLLYFVFGPVIGL--DRFATAVLALALFQGAYTAEVFRGGLNSIPQ 160 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ ++GL+R T +ILPQ + + PL++E +S++K++S+ S + I ++ + Sbjct: 161 GQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGR 220 Query: 180 RIVSTTYQPLIIYCELAFVY 199 IVS T P I+ +A +Y Sbjct: 221 NIVSETAMPFEIWFSVAAIY 240 >gi|123444360|ref|YP_001008325.1| ABC transporter permease [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122091321|emb|CAL14207.1| ABC transporter permease [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 245 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 107/203 (52%), Gaps = 29/203 (14%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWI 64 L+ + L+ ++TL I+ + V S ++GF +A R D+ + + F Y + Sbjct: 10 LLAPQYLGWLWHGFLLTLWISACTVVASTLLGFLLAAAR----DSELKGLQWFSIGYSTL 65 Query: 65 FRGTPLLVQLFVIFYGL--------------PH--------IGIVFDSFVAIIISLTLNF 102 FR TPLL+QLF ++ PH +G F+A I LT Sbjct: 66 FRNTPLLIQLFFWYFAASQFLPASWIPWLNTPHEITFFGLTLGWPSFEFLAGFIGLTCYS 125 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +A+I+E +RS I + KGQ A++A+GLT Q +RH++LPQ + + PL ++++I+K+ Sbjct: 126 TAFIAEELRSGISGVAKGQKYAAHALGLTGWQAMRHVVLPQALKIAMPPLLGQYMNIIKN 185 Query: 163 TSVASTITIPEIFQTAQRIVSTT 185 +S+A I + E+ ++++ + T Sbjct: 186 SSLAMAIGVAELSYASRQVETET 208 >gi|330814717|ref|YP_004362892.1| hypothetical protein bgla_4p3090 [Burkholderia gladioli BSR3] gi|327374709|gb|AEA66060.1| hypothetical protein bgla_4p3090 [Burkholderia gladioli BSR3] Length = 505 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 6/139 (4%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISE 108 + L YVW FR PLLV L + Y LP + G + D F A +++L N SAYI+E Sbjct: 54 VRLAAGTYVWFFRSLPLLV-LLIFVYNLPQLLPATSGFLSDPFYAGLVALVANESAYIAE 112 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I R ++ +P GQ +A A+G+ +R I+LPQ + L++EFI+I+K TS+ S Sbjct: 113 IHRGGLLGVPNGQHEAGRALGIGFLGRLRLIVLPQAFRIALPSLANEFITIVKLTSLVSV 172 Query: 169 ITIPEIFQTAQRIVSTTYQ 187 I++ E+ QR+ + ++ Sbjct: 173 ISLSELLLVGQRLYTQNFK 191 >gi|259907903|ref|YP_002648259.1| Histidine transport system permease protein [Erwinia pyrifoliae Ep1/96] gi|224963525|emb|CAX55015.1| Histidine transport system permease protein [Erwinia pyrifoliae Ep1/96] gi|283477780|emb|CAY73696.1| Histidine ABC transport system, inner membrane component [Erwinia pyrifoliae DSM 12163] gi|310768186|gb|ADP13136.1| Histidine transport system permease protein [Erwinia sp. Ejp617] Length = 238 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 53/153 (34%), Positives = 91/153 (59%), Gaps = 10/153 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEII 110 + ++FRGTPL VQL V + G+ + +V ++F +++LTLN AY +E+ Sbjct: 62 FTYVFRGTPLYVQLLVFYSGMYTLEVVKGTELLNAFFRSGLNCTLLALTLNTCAYTTEVF 121 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +I ++P G+ +A+ A G + + R II+P + T+ S+E I +L ST++A T T Sbjct: 122 AGAIRAVPHGEIEAARAYGFSTFKLYRCIIMPSALRTALPAYSNEVILMLHSTALAFTAT 181 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +P++ + A+ I S TYQP I + A +YLI++ Sbjct: 182 VPDLLKVARDINSATYQPFIAFGIAAVLYLIIS 214 >gi|225016647|ref|ZP_03705839.1| hypothetical protein CLOSTMETH_00556 [Clostridium methylpentosum DSM 5476] gi|224950611|gb|EEG31820.1| hypothetical protein CLOSTMETH_00556 [Clostridium methylpentosum DSM 5476] Length = 232 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 57/190 (30%), Positives = 106/190 (55%), Gaps = 15/190 (7%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT----IISLIMH 59 W L +D F VT+ +A + ++ +IIG +A+ +++ T I+ I+ Sbjct: 20 RWL-LFLDGFK--------VTIIMAVFATLLGVIIGTIVAIAKVYSFQTGKLKILDKILS 70 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ +FRGTP++VQL + ++ + + V + + II+ +N AY++EI+R+ I++I K Sbjct: 71 VYLTVFRGTPIVVQLMIWYFII--LTSVDNGVLVAIIAFGINSGAYVAEIVRAGILAIDK 128 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A ++GL+ QT++ IILPQ L +E I++LK TSV + + ++ + Sbjct: 129 GQTEAGRSLGLSSGQTMKSIILPQAFKNILPALGNELIALLKETSVVGYVAVVDLTKVGD 188 Query: 180 RIVSTTYQPL 189 + S T + Sbjct: 189 LVRSRTMDAV 198 >gi|167771386|ref|ZP_02443439.1| hypothetical protein ANACOL_02752 [Anaerotruncus colihominis DSM 17241] gi|167666026|gb|EDS10156.1| hypothetical protein ANACOL_02752 [Anaerotruncus colihominis DSM 17241] Length = 221 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 110/206 (53%), Gaps = 8/206 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + NLI +L+ + + T+ IA + VI +IG +A++RI S ++ I Sbjct: 1 MDALYQNLIALDRWKLILSGLGTTICIALGAIVIGTLIGAVLALMRISRSR-LLRGISTL 59 Query: 61 YVWIFRGTPLLVQLFV---IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 Y+ + RG P++ QL + IF+ ++ V IIS +N AY +EI RS I + Sbjct: 60 YITVIRGIPMVTQLMIFYFIFFAPTNV----PKLVVAIISFGVNSGAYCAEIFRSGIQGV 115 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +A ++GL+ QT++ IILPQ ++EF+ ++K T+VAS I + ++ + Sbjct: 116 PVGQVEAGRSLGLSGAQTMKLIILPQAFKAVLPTYTNEFVVLIKETAVASYIALVDLTKA 175 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 +I + T+ + A +YL +T Sbjct: 176 TDQIRNATFNAWVPLLTAAVIYLCMT 201 >gi|59801354|ref|YP_208066.1| putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae FA 1090] gi|194098395|ref|YP_002001453.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae NCCP11945] gi|239998800|ref|ZP_04718724.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae 35/02] gi|240014284|ref|ZP_04721197.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae DGI18] gi|240016719|ref|ZP_04723259.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae FA6140] gi|240080912|ref|ZP_04725455.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae FA19] gi|240112729|ref|ZP_04727219.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae MS11] gi|240115477|ref|ZP_04729539.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae PID18] gi|240117771|ref|ZP_04731833.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae PID1] gi|240121847|ref|ZP_04734809.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae PID24-1] gi|240123327|ref|ZP_04736283.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae PID332] gi|240125576|ref|ZP_04738462.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae SK-92-679] gi|240128029|ref|ZP_04740690.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae SK-93-1035] gi|254493586|ref|ZP_05106757.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae 1291] gi|260440713|ref|ZP_05794529.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae DGI2] gi|268594645|ref|ZP_06128812.1| amino acid ABC transporter [Neisseria gonorrhoeae 35/02] gi|268597029|ref|ZP_06131196.1| amino acid ABC transporter [Neisseria gonorrhoeae FA19] gi|268598794|ref|ZP_06132961.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae MS11] gi|268601152|ref|ZP_06135319.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae PID18] gi|268603471|ref|ZP_06137638.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae PID1] gi|268681951|ref|ZP_06148813.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae PID332] gi|268684165|ref|ZP_06151027.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae SK-92-679] gi|268686419|ref|ZP_06153281.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae SK-93-1035] gi|291044023|ref|ZP_06569739.1| amino acid ABC transporter [Neisseria gonorrhoeae DGI2] gi|293399215|ref|ZP_06643380.1| polar amino acid transport system permease [Neisseria gonorrhoeae F62] gi|59718249|gb|AAW89654.1| putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae FA 1090] gi|193933685|gb|ACF29509.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae NCCP11945] gi|226512626|gb|EEH61971.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae 1291] gi|268548034|gb|EEZ43452.1| amino acid ABC transporter [Neisseria gonorrhoeae 35/02] gi|268550817|gb|EEZ45836.1| amino acid ABC transporter [Neisseria gonorrhoeae FA19] gi|268582925|gb|EEZ47601.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae MS11] gi|268585283|gb|EEZ49959.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae PID18] gi|268587602|gb|EEZ52278.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae PID1] gi|268622235|gb|EEZ54635.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae PID332] gi|268624449|gb|EEZ56849.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae SK-92-679] gi|268626703|gb|EEZ59103.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae SK-93-1035] gi|291012486|gb|EFE04475.1| amino acid ABC transporter [Neisseria gonorrhoeae DGI2] gi|291610629|gb|EFF39739.1| polar amino acid transport system permease [Neisseria gonorrhoeae F62] gi|317164090|gb|ADV07631.1| putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae TCDC-NG08107] Length = 248 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 99/183 (54%), Gaps = 27/183 (14%) Query: 61 YVWIFRGTPLLVQLFVI------FYGLPHIGIV------------FDSFVAIIISLTLNF 102 YV +FRGTPL VQ+ + F+ P GI+ + +A ++L N Sbjct: 69 YVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILVSGEAAIALRRGYGPLIAGSLALIANS 128 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AYI EI R+ I SI KGQ +A+ ++GLT Q +R++ILPQ + PL+SEFI++LK Sbjct: 129 GAYICEIFRAGIQSIDKGQMEAACSLGLTYPQAMRYVILPQALRRMLPPLASEFITLLKD 188 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCE----LAFVYLILTSFCYIIQIKIESSVT 218 +S+ S I + E+ Q ++ Y +Y E A +YL++T+F I +++E Sbjct: 189 SSLLSVIAVAEL-AYVQNTITGRYS---VYEEPLYTAALIYLLMTTFLGWIFLRLEKRYN 244 Query: 219 -QH 220 QH Sbjct: 245 PQH 247 >gi|167766046|ref|ZP_02438099.1| hypothetical protein CLOSS21_00539 [Clostridium sp. SS2/1] gi|317498083|ref|ZP_07956386.1| binding-protein-dependent transport system inner membrane component [Lachnospiraceae bacterium 5_1_63FAA] gi|167712126|gb|EDS22705.1| hypothetical protein CLOSS21_00539 [Clostridium sp. SS2/1] gi|291560004|emb|CBL38804.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SSC/2] gi|316894671|gb|EFV16850.1| binding-protein-dependent transport system inner membrane component [Lachnospiraceae bacterium 5_1_63FAA] Length = 225 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 115/213 (53%), Gaps = 16/213 (7%) Query: 16 LLY-AAIVVTLPIACISFVISLIIGFFIAVIRIFFSD----TIISLIMHFYVWIFRGTPL 70 LLY + VT+ ++ I+ +I + +G +A++R+ T++S I + Y+ I RGTP Sbjct: 16 LLYLDGLKVTILVSVIAILIGVALGTILALMRLTAEQKGKSTLLSKIAYVYIDIIRGTPT 75 Query: 71 LVQL----FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 L QL FVI G G++ S ++ LN +AY++EIIR+ I ++ +GQ + Sbjct: 76 LTQLMIMYFVILKG--QNGLLVGS-----LTFGLNSAAYVAEIIRAGIQAVDQGQMEGGR 128 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL+ QT++ IILPQ I L +EFI ++K TS+ + I ++ + + ++S + Sbjct: 129 SLGLSYVQTMKDIILPQAIKNILPALGNEFIVLIKETSILGYVAIVDLTKVSDFVISRIF 188 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + L A +Y ++ + +E + Q Sbjct: 189 EALAPLLGTALIYYVIVKILTLGLNALERRLRQ 221 >gi|299541860|ref|ZP_07052183.1| amino-acid ABC transporter permease protein [Lysinibacillus fusiformis ZC1] gi|298725598|gb|EFI66239.1| amino-acid ABC transporter permease protein [Lysinibacillus fusiformis ZC1] Length = 235 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 109/190 (57%), Gaps = 10/190 (5%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +T +A S ++ + G +A ++ S ++ + Y I R TP +V LF+++YG+P Sbjct: 23 ITFLVAGSSIILGTLFGLLLAAAKLS-SVKWLTKFANLYTTIMRCTPSIVLLFLVYYGVP 81 Query: 83 ----HIGIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 ++G+ S + ++++ TL F+A +SE+IRS+ ++IPKGQ++A+ ++GLT Q Sbjct: 82 ALAENVGLNLHSIETAIFVVVTFTLQFAAIMSEVIRSAYLAIPKGQFEAAVSVGLTPFQA 141 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST--TYQPLIIYC 193 R II PQ + + + I++L+ ++A TI + +I A I+++ L IY Sbjct: 142 YRRIIFPQALVVALPNFGNGMIALLQEGALAYTIGLIDIVGKANLIIASNINAHALEIYI 201 Query: 194 ELAFVYLILT 203 LA +Y +L+ Sbjct: 202 ALAIIYWVLS 211 >gi|284992300|ref|YP_003410854.1| polar amino acid ABC transporter inner membrane subunit [Geodermatophilus obscurus DSM 43160] gi|284065545|gb|ADB76483.1| polar amino acid ABC transporter, inner membrane subunit [Geodermatophilus obscurus DSM 43160] Length = 215 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 76/130 (58%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FYV FR TPL V F I +GLP I V F ++S+ L +A++ E +RS + ++ Sbjct: 53 FYVETFRNTPLTVVFFFIIFGLPQIDFVIGFFPGAVLSVGLYTAAFVCEAVRSGVNAVSG 112 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ A+GLT Q +R ++LPQ T PL + I+++K+TS+A+ ++ ++ Sbjct: 113 GQAEAARALGLTFGQALREVVLPQAFRTVVPPLGNVLIAMVKNTSIAAGFSVSDLSSLLP 172 Query: 180 RIVSTTYQPL 189 R+V+ L Sbjct: 173 RLVNADAGDL 182 >gi|254360617|ref|ZP_04976766.1| possible arginine ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica PHL213] gi|261493366|ref|ZP_05989892.1| putative arginine ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496632|ref|ZP_05993012.1| putative arginine ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|153091157|gb|EDN73162.1| possible arginine ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica PHL213] gi|261307835|gb|EEY09158.1| putative arginine ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311010|gb|EEY12187.1| putative arginine ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 223 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 112/199 (56%), Gaps = 14/199 (7%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH---FYVWIFRGTPLL 71 LL A ++TL IA + SL+IG +++ + + I+ I + + RG P + Sbjct: 7 NLLVNATLMTLGIA----LASLLIGMLLSIFFVVLETSKIACIRKPTSIIITLLRGLPEI 62 Query: 72 VQLFVIFYGLPH-IGIVFDSFVAI------IISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + +F+I++GL I ++ D F + I+L + F+AY S+ +R +I +IP GQW++ Sbjct: 63 LVVFLIYFGLIQVIFLITDEFAELNAFWCGAIALGIIFAAYASQSLRGAIKAIPVGQWES 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+GL+R Q IILPQ + LS++++ +LK T++ S I + ++ + ++ I + Sbjct: 123 GTALGLSRAQVFVRIILPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLMRQSELINAN 182 Query: 185 TYQPLIIYCELAFVYLILT 203 T+QP Y A +YL +T Sbjct: 183 THQPFTWYGIAALIYLAIT 201 >gi|290512796|ref|ZP_06552161.1| glutamine ABC transporter permease [Klebsiella sp. 1_1_55] gi|289774679|gb|EFD82682.1| glutamine ABC transporter permease [Klebsiella sp. 1_1_55] Length = 219 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 91/156 (58%), Gaps = 1/156 (0%) Query: 49 FSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYIS 107 TI + +V + RGTP++VQ+ I++ LP + + D A II++ +N AYI+ Sbjct: 47 LGGTISKTVSLVFVELIRGTPIMVQVMFIYFALPMVLPVRIDPVPAAIITIVINSGAYIA 106 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 EI R +I+SI KG +AS A+GL+ + T+ H+I+P L +++I +K TS+ Sbjct: 107 EITRGAILSINKGFKEASLAMGLSPRSTLLHVIMPLAFRRMIPALGNQWIISIKDTSLFI 166 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I + E+ + Q I++ ++ L ++ +A +YL LT Sbjct: 167 VIGVAELTRQGQEIIAGNFRALEVWTAVAMIYLFLT 202 >gi|331683979|ref|ZP_08384575.1| histidine transport system permease protein HisQ [Escherichia coli H299] gi|331078931|gb|EGI50133.1| histidine transport system permease protein HisQ [Escherichia coli H299] Length = 228 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V+++IIG A ++ + + LI Y + RG P L Sbjct: 4 GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLS-QNRLSGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G TR Q R I+ P + + + + + ILKST++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVLKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +T++P +YL+ T+ Sbjct: 183 AGKSTWEPFYFAIVCGVIYLVFTT 206 >gi|311112079|ref|YP_003983301.1| amino acid ABC transporter permease [Rothia dentocariosa ATCC 17931] gi|310943573|gb|ADP39867.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Rothia dentocariosa ATCC 17931] Length = 267 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 63/208 (30%), Positives = 110/208 (52%), Gaps = 9/208 (4%) Query: 6 FNLII--DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 FNL + FP ++ A+ TL + F + L +G +A++RI S + YV Sbjct: 44 FNLEVAQKQFPNVITVALKNTLIYTALGFAVGLSLGLILALMRIS-SIAPYRWLATIYVE 102 Query: 64 IFRGTPLLVQLFVIFYGLP-HIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 IFRG P L+ F YG+P I F D+ + + +SL L SAYISE++R+ + ++PKGQ Sbjct: 103 IFRGIPALLVFFAFGYGIPLAFKIRFVDNLIPVTLSLGLVSSAYISEVLRAGLQAVPKGQ 162 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++A+ ++G++ + + +I+PQ PL++E I + K +S+ + + Q AQ Sbjct: 163 YEAARSLGMSHTRAMLSVIIPQAFRIVLPPLTNEVILLTKDSSLVYLLGV----QIAQYE 218 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYII 209 ++ + I L++ CY+I Sbjct: 219 LAKFGREGITASGAGLTPLVVAGLCYLI 246 >gi|300214383|gb|ADJ78799.1| Glutamine-binding protein / Glutamine transport system permease protein [Lactobacillus salivarius CECT 5713] Length = 485 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 103/184 (55%), Gaps = 8/184 (4%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIF---FSDTIISLIMHFYVWIFRGTPLLVQLFV 76 IV TL + + + + I G I ++ + F+ I + I ++IFRG PLLV Sbjct: 286 GIVETLKLTVVGIIGATIFGILIGMLGVVPNKFAQGISTTI----IYIFRGLPLLVLALF 341 Query: 77 IFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+ G+P + G +F+A II+LTLN AY + ++ I ++ KGQ +A+ ++GL+ ++ Sbjct: 342 IYNGIPSLTGSKIPAFIAGIITLTLNEGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKS 401 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R +ILPQ + ++FI LK TS+ S I I E+ QT + I++ + I+ + Sbjct: 402 MRKVILPQGVKIMIPSFINQFIITLKDTSILSIIGILELTQTGKIIIARNLEGFRIWGII 461 Query: 196 AFVY 199 A +Y Sbjct: 462 AIMY 465 >gi|227112028|ref|ZP_03825684.1| arginine transporter permease subunit ArtM [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227329262|ref|ZP_03833286.1| arginine transporter permease subunit ArtM [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 222 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 100/172 (58%), Gaps = 12/172 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYG---------LPHI-GIVFDSFVAIIISLTLNF 102 +ISL+ Y+ +F GTPLLVQ+F+I+YG +P + ++ ++ +++L LN Sbjct: 43 VISLLAKGYITLFTGTPLLVQIFLIYYGPGQFTSIQQIPWLWNLLSQPWLCAMVALALNS 102 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +++ ++ +IP GQW + A+G+ +KQT+R I+LP + S+E + + KS Sbjct: 103 AAYTTQLFYGAVKAIPAGQWQSCAALGMDQKQTLR-ILLPFAFKRALSSYSNEVVLVFKS 161 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+A TIT+ E+ +Q + TY ++++ +YL + ++ +E Sbjct: 162 TSLAYTITLMEVMGYSQLMYGRTYD-VMVFGAAGIIYLCVNGLLTLLMRWVE 212 >gi|213162276|ref|ZP_03347986.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 226 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 108/214 (50%), Gaps = 12/214 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V++++IG A ++ + + LI Y + RG P L Sbjct: 4 GFSGVILQGAIVTLELALSSVVLAVLIGLVGAGAKLS-QNRVTGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP-HIGIVFDSF----------VAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL + +V DS VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNVVTDSLGIDQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G T QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTHGQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 +T++P +YL+ T+ + + +E Sbjct: 183 AGKSTWEPFYFAVVCGLIYLVFTTVSNGVLLLLE 216 >gi|110636301|ref|YP_676509.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110287285|gb|ABG65344.1| amino acid ABC transporter membrane protein 2, PAAT family [Chelativorans sp. BNC1] Length = 213 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 63/182 (34%), Positives = 105/182 (57%), Gaps = 6/182 (3%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 S V+ ++G I ++R+ S +I I V I +G P LV LF+ ++GL GIV Sbjct: 26 SLVLGSVVGIGICLLRLSNSK-LIGAIAATIVAIGQGVPPLVLLFLAYFGLAFAGIVVSP 84 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 F+A I+L+ + Y+ EI RS+I SIP QW+AS ++ L+ Q + ++I+PQ I A Sbjct: 85 FMASCIALSFFAAVYLGEIWRSAIQSIPIAQWEASESLSLSWAQQMIYVIVPQAIRL-AT 143 Query: 151 PLSSEFI-SILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYII 209 P S FI ++K+TS+AS + + E+ + Q + + T+Q ++ +A +Y + CY I Sbjct: 144 PSSVGFIVQLVKNTSLASIVGLVELTRAGQLVNNATFQAFQVFLTVAIIYFCI---CYPI 200 Query: 210 QI 211 + Sbjct: 201 SL 202 >gi|310639892|ref|YP_003944650.1| glutamine abc transporter permease protein [Paenibacillus polymyxa SC2] gi|309244842|gb|ADO54409.1| Glutamine ABC transporter permease protein [Paenibacillus polymyxa SC2] Length = 216 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 66/197 (33%), Positives = 107/197 (54%), Gaps = 4/197 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++TL +A S + S +G ++R + ++S + F + + R PLL+ +F I Sbjct: 18 GFLLTLEVAIYSIIFSFALGIVFGILR-YTRIPVLSQVAAFIIDLIRNLPLLLIIFFIGM 76 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 LP IG+ A I L++ A I+EI+RS + S+ KGQ +A+ + GL+ QT+ HI Sbjct: 77 VLPSIGLSISLKWAAITGLSIFEGAMIAEIVRSGLNSVHKGQLEAARSSGLSYSQTLWHI 136 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL--AF 197 ILPQ + P+ S+FIS+ K TS+A I++PE+ Q IV Q +I L AF Sbjct: 137 ILPQALRRMVPPIVSQFISLFKDTSLAVIISLPELTHNIQ-IVGGQNQSFVIPALLFAAF 195 Query: 198 VYLILTSFCYIIQIKIE 214 +Y + +I ++E Sbjct: 196 LYFAVNYSMSLIARRLE 212 >gi|326318772|ref|YP_004236444.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375608|gb|ADX47877.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 243 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 60/190 (31%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q + +A T+ +A ++ VI+L+ G I IR + + + +V +FR PLLVQ+ Sbjct: 23 QWMLSAWGWTVSVALLALVIALVAGSVIGTIRTLPDNKFLVGFGNAWVELFRNIPLLVQI 82 Query: 75 FVIFYGLPHIGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 F+ ++ +P I V S F+ ++++L SA I+E +RS I ++P+GQ A A+G T Sbjct: 83 FLWYHVVPAIFPVMKSVSGFILVVLALGFFTSARIAEQVRSGIQALPRGQRYAGMALGFT 142 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 Q R+++LP PL+SE ++I K++SVA +++ E+ A + T + + I Sbjct: 143 TAQYYRYVLLPMAFRIIIPPLTSETMNIFKNSSVAFAVSVTELTMFAMQAQEETSRGIEI 202 Query: 192 YCELAFVYLI 201 Y + +Y+I Sbjct: 203 YLAVTGLYVI 212 >gi|158425496|ref|YP_001526788.1| putative amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158332385|dbj|BAF89870.1| putative amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 235 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 101/179 (56%), Gaps = 2/179 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++I+D++P L+ + +TL +A ++ + S ++ + V+ S ++ +H YV FR Sbjct: 2 DIILDNWP-LIQKGLGMTLGLAVVTLLFSTLVSLILGVMATLHSR-MLRWSIHGYVEFFR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PL+V +F +++ LP +G+ F A++ LTL SA EI+R+ I ++P QW +++ Sbjct: 60 AIPLIVNVFFVYFVLPTLGLDLSPFAAVVFGLTLWGSANGIEIVRAGIEAVPAHQWRSAW 119 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G+ + + HI+ PQ I P + ++++TS+ + + + E + Q I+ + Sbjct: 120 ALGMRQWEVYWHIVAPQAIRLIVPPFTGLLTLLVQATSLGALVGVTEFLKVGQIIIERS 178 >gi|315655535|ref|ZP_07908434.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii ATCC 51333] gi|315656552|ref|ZP_07909439.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315490190|gb|EFU79816.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii ATCC 51333] gi|315492507|gb|EFU82111.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 217 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 54/171 (31%), Positives = 99/171 (57%), Gaps = 5/171 (2%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS----FVAIIISLTLNFSAYISEI 109 ++ I+ FY+ I RGTPL++QL V+++G ++ V S F A II+ ++N++AY +EI Sbjct: 46 LNWIVQFYISIMRGTPLMLQLMVVYFGPYYLFKVPISASYNFWAAIIAFSVNYAAYFAEI 105 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +IP+GQ +A++ +G ++++T I LPQ T +++E I+++K TS+A I Sbjct: 106 YRGGFQAIPQGQTEAAFVLGYSQQRTFYTIKLPQMFRTVLPSITNEVITLVKDTSLAQVI 165 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + E+F A+ STT + + Y + + K+E V+++ Sbjct: 166 SFLEMFSIAREYASTT-ASMAPFVAAGIFYYVFNMVVAMTMNKLEKRVSKY 215 >gi|310779669|ref|YP_003968002.1| amino acid ABC transporter membrane protein, PAAT family [Ilyobacter polytropus DSM 2926] gi|309748992|gb|ADO83654.1| amino acid ABC transporter membrane protein, PAAT family [Ilyobacter polytropus DSM 2926] Length = 281 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 108/204 (52%), Gaps = 6/204 (2%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMH 59 Y W I+D + + +T+ I+ S SL+IG +A+ + T + + Sbjct: 64 NYMWKETIVDYRYKFI-KGFCITIIISFFSLFCSLVIGTMMAIGQ---RTTFLPVYYFSK 119 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FYV RGTPL+VQ+++ FY + + D ++ I+ + AY++EIIRS I SI Sbjct: 120 FYVEFIRGTPLIVQIYLFFYVVGTAFNITDRYIMGILIMASFSGAYVAEIIRSGIESISA 179 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q + + A+ T QT +IILPQ + PL+ +F S++K +S+ S I + E + Q Sbjct: 180 SQLETAKALAFTPFQTYVYIILPQVVKRITPPLAGQFASLIKDSSLLSIIAVNEFTKNVQ 239 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 + S T+ P+ Y LA YL+LT Sbjct: 240 EVDSLTFAPVENYFILAVGYLLLT 263 >gi|115350619|ref|YP_772458.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria AMMD] gi|115280607|gb|ABI86124.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC transporter membrane protein [Burkholderia ambifaria AMMD] Length = 246 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 107/199 (53%), Gaps = 13/199 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ +++VI+LI+G V+R + +S I YV IFR PL+VQ F+ Sbjct: 26 LMSGFWVTIEVSLVAWVIALIVGSLFGVLRTV-PNKWLSAIGTIYVSIFRNVPLIVQFFI 84 Query: 77 IFYGLPH-----IGIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + +P +G F A I+ L L A + E +RS I ++P GQ A Sbjct: 85 WYLVVPELLPASVGTWIKQLPPTTQFFTASIVCLGLFTGARVCEQVRSGINALPTGQRAA 144 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 145 GLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDY 204 Query: 185 TYQPLIIYCELAFVYLILT 203 T Q + + Y+++ Sbjct: 205 TAQTYESFIAVTLAYVVIN 223 >gi|283852207|ref|ZP_06369480.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] gi|283572433|gb|EFC20420.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] Length = 230 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 58/223 (26%), Positives = 112/223 (50%), Gaps = 10/223 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 II + L+ I++ +P + + I + G R++ +I ++ +YV +FRGT Sbjct: 12 IIPALDAGLWTTILLIVPASLLGMAIGVTAG----TARVYGPRPLIR-VLDWYVAVFRGT 66 Query: 69 PLLVQLFVIFYGLPHIGI-----VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 PL+VQL+ ++ LP++ + V A II L AY SE IR ++SI +GQ Sbjct: 67 PLVVQLYFWYFALPNVAVGDVRLVLPPMWAAIIGFALCSGAYQSEYIRGGLLSIKRGQLR 126 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+G+T T+ ++LPQ + +E I ++K +S+AS IT+ ++ + + Sbjct: 127 AAQALGMTPLTTVTSVVLPQAFRRALPGCGNEIIYLIKYSSLASIITVNDLTGMGRSLAK 186 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 ++++ ++ + YL L + + +E + + K Sbjct: 187 SSFRNTEVFVVVGLYYLALVTVATFVLRAVEKKLEIPGFEGKK 229 >gi|262041259|ref|ZP_06014470.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041375|gb|EEW42435.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 246 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 116/214 (54%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ +T+ ++ +++I+ ++G ++R + +S I YV +FR PL+VQ F Sbjct: 25 LWGGFQITVALSISAWIIAFLVGSLFGILRTV-PNRFLSGIGTCYVELFRNVPLIVQFFT 83 Query: 77 IFYGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P +IG+ F S FV+ ++ L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVVPEFLPENIGMWFKSELDPNIQFFVSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLADMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+ + + +I +E V Sbjct: 204 YSAHAWESFTAITLAYVFINAVIMLIMYVVERKV 237 >gi|170724086|ref|YP_001751774.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169762089|gb|ACA75405.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 231 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 11/155 (7%) Query: 60 FYVWIFRGTPLLVQLFVIFYG-----------LPHIGIVFDSFVAIIISLTLNFSAYISE 108 FY + RG P L+ + +I++G L G+ +F A +I+L L F AY +E Sbjct: 54 FYSTLVRGVPELLWVLLIYFGTVGLMNSLGEALNMPGLELSAFAAGVIALGLCFGAYATE 113 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 + R +I++IPKG +A A+GL++ + + IILPQ + L + F+ ++K T++ S Sbjct: 114 VFRGAILAIPKGHREAGLALGLSKARILSRIILPQMWRIALPGLGNLFMILMKDTALVSV 173 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I + EI + AQ V+ T +P Y A +YL LT Sbjct: 174 IGLEEIMRHAQIGVTVTKEPFTFYMVAACIYLGLT 208 >gi|317153799|ref|YP_004121847.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] gi|316944050|gb|ADU63101.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] Length = 255 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 69/238 (28%), Positives = 118/238 (49%), Gaps = 38/238 (15%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF- 60 + W ++ Q ++ +V T+ IA IS + ++++G I V R+ T L+ F Sbjct: 4 NFNWKIMLSGEPAQWMWEGLVTTMQIATISLLCAMLLGIVICVFRM----TPFKLLQWFS 59 Query: 61 --YVWIFRGTPLLVQLF-------------------VIFYGLPHIGIVFD---------- 89 Y FR TPLLVQ+F V++Y P +F Sbjct: 60 LAYTEFFRNTPLLVQIFFWYNASHFVLPEALNKWMNVLYYWFPGPFTLFGHEYAGQWMLF 119 Query: 90 --SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 F+ +I+LT+ SA+I+E IR+ I SIPK Q +AS A+GL+ Q R++ILPQ + Sbjct: 120 NVEFMTGVIALTVYTSAFIAEEIRAGIFSIPKTQIEASRAVGLSFTQAYRYVILPQALRI 179 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSF 205 PL S+ ++++K++S+ I + E+ A+++ S P + +YL+++ F Sbjct: 180 VIPPLISQSLNLIKNSSLCMVIGVTELMFMARQVESYHGAPFEAFSAALLIYLVISLF 237 >gi|153855979|ref|ZP_01996920.1| hypothetical protein DORLON_02945 [Dorea longicatena DSM 13814] gi|149751779|gb|EDM61710.1| hypothetical protein DORLON_02945 [Dorea longicatena DSM 13814] Length = 220 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 89/146 (60%), Gaps = 11/146 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV-------AIIISLTLNFSAYISEIIRSS 113 YV I RGTP++ QL+ +YG+ ++ +FV A+ + ++ N A++SE IR + Sbjct: 57 YVSIMRGTPVVAQLYFFYYGIA----LYSAFVRNMTPLIAVAVVMSFNMGAFMSESIRGA 112 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++S+ +GQ +A+Y++G+T Q + I++PQ + + PL ++ I+++K TS+A + +P+ Sbjct: 113 LLSVDEGQKEAAYSLGMTNFQLVTRIVIPQAVRVALPPLFNDIINLIKMTSLAFMLGVPD 172 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVY 199 I A+ + T++ IY + VY Sbjct: 173 IMGAAKIEGARTFRYFEIYAAVMLVY 198 >gi|78356431|ref|YP_387880.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218836|gb|ABB38185.1| amino acid ABC transporter membrane protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 337 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 106/197 (53%), Gaps = 20/197 (10%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 S P +L + VTL ++ IS V + G + RI + + Y+ + RG+PLL Sbjct: 122 SEPGVLLQGLWVTLEVSLISIVFGITFGVLTGLARIS-ENPALKWGAITYIELIRGSPLL 180 Query: 72 VQLFVIFY-------------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 VQ+F+ ++ GL + ++ +++L++ AY++EI+R+ I S+ Sbjct: 181 VQIFLWYFVAGTLVNNLLMQAGLGQVPPMWFG----VLALSVFTGAYVAEIVRAGIQSVH 236 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+ ++GL Q +R +ILPQ PL+ +FIS++K +S+ I I E+ + Sbjct: 237 RGQMEAARSLGLNYSQAMRKVILPQAFRRIMPPLAGQFISLVKDSSLLGVIAIRELTKAT 296 Query: 179 QRIVSTTYQP--LIIYC 193 + +VS++ QP L I C Sbjct: 297 REVVSSSLQPFELWILC 313 >gi|289673930|ref|ZP_06494820.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. syringae FF5] Length = 166 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 93/164 (56%) Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 L + YV + RGTP+ V + +FY +P +G +F A I LTL +++SEI+R ++ Sbjct: 1 RLPIRLYVDLIRGTPVFVLVLAVFYMVPALGWQISAFQAGAIGLTLFCGSHVSEIVRGAL 60 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IP+GQ +A AIGL Q++R+++LPQ + + I+K++++ S I + E+ Sbjct: 61 QAIPRGQLEAGKAIGLRFNQSLRYVLLPQAMRQILPTWVNSSTEIVKASTLLSVIGVAEL 120 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 + Q++++ T+ L Y F++ ++ ++ +IE V Sbjct: 121 LLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLGRQIEKRVA 164 >gi|206579836|ref|YP_002239087.1| glutamine ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288935990|ref|YP_003440049.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|206568894|gb|ACI10670.1| glutamine ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288890699|gb|ADC59017.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] Length = 218 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 91/156 (58%), Gaps = 1/156 (0%) Query: 49 FSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYIS 107 TI + +V + RGTP++VQ+ I++ LP + + D A II++ +N AYI+ Sbjct: 46 LGGTISKTVSLVFVELIRGTPIMVQVMFIYFALPMVLPVRIDPVPAAIITIVINSGAYIA 105 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 EI R +I+SI KG +AS A+GL+ + T+ H+I+P L +++I +K TS+ Sbjct: 106 EITRGAILSINKGFKEASLAMGLSPRSTLLHVIMPLAFRRMIPALGNQWIISIKDTSLFI 165 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I + E+ + Q I++ ++ L ++ +A +YL LT Sbjct: 166 VIGVAELTRQGQEIIAGNFRALEVWTAVAMIYLFLT 201 >gi|328544775|ref|YP_004304884.1| ABC transporter permease [polymorphum gilvum SL003B-26A1] gi|326414517|gb|ADZ71580.1| ABC transporter permease protein [Polymorphum gilvum SL003B-26A1] Length = 221 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 2/169 (1%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVA 93 ++IGF R+ + +L Y IFR TPLLVQL +Y P IG D+ VA Sbjct: 35 GVLIGFVTCAARLSHWKALNAL-ARIYQEIFRCTPLLVQLLWFYYAFPLLIGGSIDNRVA 93 Query: 94 IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS 153 +++L+L A+ +EI R I+SI KGQ +A+ AIG+ Q++ IILPQ + Sbjct: 94 AMLTLSLYVGAFYAEIFRGGIVSIDKGQREAAAAIGMNPWQSMTRIILPQALKRMLPSFI 153 Query: 154 SEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 ++ + K+TS+ S I++ ++ A + TY+PL Y +A +Y+++ Sbjct: 154 NQSVIQFKNTSLVSVISVADLAYMAAVVNGQTYRPLESYSVMAVLYIVM 202 >gi|301301313|ref|ZP_07207463.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851087|gb|EFK78821.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 485 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 103/184 (55%), Gaps = 8/184 (4%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIF---FSDTIISLIMHFYVWIFRGTPLLVQLFV 76 IV TL + + + + I G I ++ + F+ I + I ++IFRG PLLV Sbjct: 286 GIVETLKLTVVGIIGATIFGILIGMLGVVPNKFAQGISTTI----IYIFRGLPLLVLALF 341 Query: 77 IFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+ G+P + G +F+A II+LTLN AY + ++ I ++ KGQ +A+ ++GL+ ++ Sbjct: 342 IYNGIPSLTGSKIPAFIAGIITLTLNEGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKS 401 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R +ILPQ + ++FI LK TS+ S I I E+ QT + I++ + I+ + Sbjct: 402 MRKVILPQGVKIMIPSFINQFIITLKDTSILSIIGILELTQTGKIIIARNLEGFRIWGII 461 Query: 196 AFVY 199 A +Y Sbjct: 462 AIMY 465 >gi|260662200|ref|ZP_05863096.1| ABC transporter permease component [Lactobacillus fermentum 28-3-CHN] gi|260553583|gb|EEX26475.1| ABC transporter permease component [Lactobacillus fermentum 28-3-CHN] Length = 235 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 118/211 (55%), Gaps = 20/211 (9%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMHFYVWIFR 66 +DSF Q+ A VTL IA ++ V+ L++ +AV+R + I+++I+ F R Sbjct: 8 VDSFSQIASVA-PVTLLIAIVAAVVGLLLAILVAVVRERQVKVLAPIVAVIVSF----VR 62 Query: 67 GTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLT---LNFSAYISEIIRSSI 114 GTP++VQL+V++YGLP + +V + A++I+ T LN A +SE IRS+ Sbjct: 63 GTPIIVQLYVVYYGLPQLLVVMKGWGWNTNPNGLPALVIAFTAFSLNAMANLSESIRSAY 122 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ GQ++A+ A+G+T + + I++PQ I ++ F+ ++K T++ I I EI Sbjct: 123 HAVDYGQYEAAVAVGMTPLRAMIQIVVPQLIANLIPNFTNIFLDLIKDTALVYNIGIVEI 182 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSF 205 A I + ++ L Y + +Y+I+ F Sbjct: 183 MGEANIISAIGFKYLETYVDALIIYIIICWF 213 >gi|258645925|ref|ZP_05733394.1| amino acid ABC transporter, permease protein [Dialister invisus DSM 15470] gi|260403294|gb|EEW96841.1| amino acid ABC transporter, permease protein [Dialister invisus DSM 15470] Length = 225 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 106/197 (53%), Gaps = 10/197 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + T+ I+ +S + S+I G F + + + LI FY+ R P LV LF+ Sbjct: 18 LLSGLWTTVEISLLSVIGSVIFGLFTGLF-MTLQNRAAKLISRFYLEFIRIMPQLVLLFI 76 Query: 77 IFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 ++G+ GI F A +I L +A + +++R ++ISIPK Q++++ A+GL+R+Q Sbjct: 77 AYFGITRAFGISLSGFTASVIVFILWGAAEMGDLVRGALISIPKSQYESAEALGLSRRQM 136 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY-----QPLI 190 R II+PQ++ P + F I+K+TS+ I + E+ +T Q+I+ L Sbjct: 137 YRFIIIPQSLRRLLPPAINLFTRIIKTTSLVVLIGVVEMLKTGQQIIEANRYTAPDAALW 196 Query: 191 IYCELAFVYLILTSFCY 207 IY + F+Y + CY Sbjct: 197 IYAAIFFLYFLA---CY 210 >gi|157369068|ref|YP_001477057.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157320832|gb|ABV39929.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 254 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 57/170 (33%), Positives = 93/170 (54%), Gaps = 31/170 (18%) Query: 61 YVWIFRGTPLLVQLFVIFYGL------PHIGIV-----------------FDSFVAIIIS 97 Y+ FRGTPL VQ+ V+ + L P G++ + +F++ +++ Sbjct: 68 YISAFRGTPLFVQIMVVHFALVPLFINPRDGLLVTNGLMSSDFARALRSDYGAFLSCVVA 127 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 +TLN AY+SEI R+ I SI +GQ +AS ++G+ +T+R +ILPQ PL + I Sbjct: 128 ITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMGYGKTMRKVILPQAFRRMLPPLGNNAI 187 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTY----QPLIIYCELAFVYLILT 203 +I+K +S+AS I + ++ A R VS Y +P Y ++ VY +LT Sbjct: 188 AIVKDSSLASAIGLADL-AYAARTVSGAYATYWEP---YLTISLVYWVLT 233 >gi|331701132|ref|YP_004398091.1| polar amino acid ABC transporter inner membrane subunit [Lactobacillus buchneri NRRL B-30929] gi|329128475|gb|AEB73028.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus buchneri NRRL B-30929] Length = 489 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 108/182 (59%), Gaps = 6/182 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ I+ +S ++IG +A++R + L + + +I RGTPL+VQ+ +++G Sbjct: 294 TILISIVSTFFGVLIGVILALMRFSKQKWLRGLAISYTEFI-RGTPLMVQVLFVYFG--- 349 Query: 84 IGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IG+V + + ++ +I+++LN AY++EIIR I S+ KGQ +A+ ++GL++ +R +IL Sbjct: 350 IGVVVNIPALISGMIAVSLNSGAYVAEIIRGGINSVAKGQTEAAASLGLSKGDLMRFVIL 409 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ L +EFIS++K +S+ S I + ++ + + TY+ ++ +Y I Sbjct: 410 PQAFKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLNIVRADTYRGVMPIFVAMLLYFI 469 Query: 202 LT 203 +T Sbjct: 470 MT 471 >gi|317053173|ref|YP_004119527.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316953500|gb|ADU72971.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 229 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 105/184 (57%), Gaps = 4/184 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIIS---LIMHFYVWIFRGTPLLVQLFVIFY 79 +TL ++ +I + GF +AV I ++S ++H Y +IFR P LV LF++F+ Sbjct: 27 ITLALSAFGCLIGFLAGFVLAVT-INTKAALLSPLRGVVHVYFFIFRRIPFLVTLFLVFF 85 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + G+ F +F +IS+ + +AY+ EIIRS + S+ QW+A+ + + QT+R++ Sbjct: 86 ISQYSGLRFSTFTVALISVCIIAAAYLGEIIRSGLESVHHNQWEAAVTLNFSYLQTLRYV 145 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I+PQ++T P S F+ +K T++AS I + E+ ++ + Y ++Y + +Y Sbjct: 146 IIPQSLTVVIPPTFSFFVMYIKDTTLASQIGVMELTSASKILSDKGYSATLVYAVVLMLY 205 Query: 200 LILT 203 I++ Sbjct: 206 FIVS 209 >gi|187925334|ref|YP_001896976.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187716528|gb|ACD17752.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 246 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 102/183 (55%), Gaps = 13/183 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ ++VI+LI+G V+R + S I YV IFR PL+VQ F+ Sbjct: 26 LLSGFWVTITVSLSAWVIALIVGSLFGVLRTV-PNKWASGIGTLYVAIFRNIPLIVQFFI 84 Query: 77 IFYGLPHI-----GIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + +P + G F F + II L L +A + E +RS I ++PKGQ A Sbjct: 85 WYLVIPELLPASMGNWFKQLPPGAQFFSSSIICLGLFTAARVCEQVRSGINALPKGQRAA 144 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 145 GLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDY 204 Query: 185 TYQ 187 T Q Sbjct: 205 TSQ 207 >gi|310768187|gb|ADP13137.1| Histidine transport system permease protein [Erwinia sp. Ejp617] Length = 228 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + ++++ +VTL +A S ++++G A R+ + +++I Y + RG P L Sbjct: 4 GYSEVIFKGALVTLELALSSVAFAVLLGLIGAGARLS-NRRPLAVISEVYTTLIRGVPDL 62 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL G D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNQVTDFFGFAQFDIDPMVAGIITLGFIYGAYFTETFRGAWMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A G TR QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 QVEAATAFGFTRSQTFRRILFPAMMRFALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T+QP +YLI T+ + +E T D Sbjct: 183 AGKSTWQPFWFAIVAGIIYLIFTTLSNGVLWWLERRYTVGVKRAD 227 >gi|29831771|ref|NP_826405.1| amino acid ABC transporter integral membrane protein [Streptomyces avermitilis MA-4680] gi|29608888|dbj|BAC72940.1| putative polar amino acid ABC transporter permease protein [Streptomyces avermitilis MA-4680] Length = 216 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 97/187 (51%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + W L D P+ + ++VTL + +I+ +G A+ + + ++ Sbjct: 1 MNWNWSTLG-DFMPRF-WDGVLVTLEALVLGSLIAFALGLVWALAQRSSLKAVRWPVLAV 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +I R TPLLVQLF FY LP GI + +I L L++S Y +E+ R+ I +P G Sbjct: 59 TEFI-RNTPLLVQLFFFFYVLPEWGITLSALATGVIGLGLHYSTYTAEVYRAGIDGVPVG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A+ L R +T +ILPQ + L + I++LK + + TI + E+ A++ Sbjct: 118 QWEAATALSLPRSRTWTAVILPQALRRVVPALGNYVIAMLKDSPMLMTIGVLEMLGEARQ 177 Query: 181 IVSTTYQ 187 S T+ Sbjct: 178 FGSRTFH 184 >gi|313607195|gb|EFR83666.1| L-cystine transport system permease protein TcyM [Listeria monocytogenes FSL F2-208] Length = 235 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 112/218 (51%), Gaps = 18/218 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 A++ T+P+ ++ GF IA+ IR++ + I FYV FR TP ++ + Sbjct: 14 AMLKTIPLTLAMTFFPILFGFIIAIGLTLIRMYHVR-FLEPIAKFYVSFFRSTPAILHIM 72 Query: 76 VIFYGLP----------HIGIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +I+ G+P +GI + V +II+L+ AY++EI+RS II++ GQ Sbjct: 73 LIYLGIPLLVDFLSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQM 132 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+Y++G T Q IR ++LPQ + ++ I L +TS+A+ + +PEI A + Sbjct: 133 EAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVA 192 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S Y L + A +Y LT I +E ++ ++ Sbjct: 193 SDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKY 230 >gi|299483523|gb|ADJ19604.1| putative ABC-type amino acid transporter [Treponema primitia ZAS-2] Length = 189 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 81/127 (63%), Gaps = 3/127 (2%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV---AIIISLTLNFSAYISEIIRSS 113 I YV + RGTP++ QL+ +YGL + + V A+ + L+LN A++SE IR++ Sbjct: 54 ITRGYVSLIRGTPIVAQLYFFYYGLAIYSVTIRNMVPVTAVAVVLSLNVGAFMSESIRAA 113 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++S+ +GQ +A+Y++G+T Q +R IILPQ + + PL ++ I+++KS+S+A + + Sbjct: 114 LMSVDEGQKEAAYSLGMTNLQLMRRIILPQAVRVALPPLFNDMINLIKSSSLAFMLGVAG 173 Query: 174 IFQTAQR 180 + + Q Sbjct: 174 CYGSRQN 180 >gi|119026276|ref|YP_910121.1| hypothetical protein BAD_1258 [Bifidobacterium adolescentis ATCC 15703] gi|118765860|dbj|BAF40039.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703] Length = 236 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 116/222 (52%), Gaps = 18/222 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++ ++ FP +L A + TL + S + +L+I + + + L++ +I Sbjct: 5 YDFMVTDFPTVL-AGLPKTLILTFWSTLFALLIALIFGCVILSNAPAFKQLVVALNTFI- 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDS-------------FVAIIISLTLNFSAYISEIIRS 112 +G PL VQL +Y +P + S F A ++++ NF AYI++++ S Sbjct: 63 KGVPLAVQLLFCYYAVPFVAKWLGSIGIYDFNPRHISYFPAAVVAIACNFGAYITDVVVS 122 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 S+ ++ +GQ +++ ++G+T QT H+I+PQ + S +++ FI +LK TS+AS I + Sbjct: 123 SVKAVDRGQIESAQSVGMTGLQTALHVIVPQAVVISLPSMTNYFIWLLKGTSLASLINVT 182 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 E+ TAQ + YQ L Y + A +Y ++ C I+ E Sbjct: 183 EMLITAQISAADGYQYLEAYIDAALIYWVV---CAAIEFGSE 221 >gi|315285930|gb|EFU45368.1| arginine/ornithine transport protein [Escherichia coli MS 110-3] Length = 228 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V+++IIG A ++ + + LI Y + RG P L Sbjct: 4 GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLS-QNRLSGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G TR Q R I+ P + + + + + ILKST++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T++P +YL+ T+ + + IE + D Sbjct: 183 AGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFIERRYSVGVKRAD 227 >gi|255027829|ref|ZP_05299815.1| hypothetical protein LmonocytFSL_18331 [Listeria monocytogenes FSL J2-003] Length = 235 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 112/218 (51%), Gaps = 18/218 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 A++ T+P+ ++ GF IA+ IR++ + I FYV FR TP ++ + Sbjct: 14 AMLKTIPLTLAMTFFPILFGFIIAIGLTLIRMYHVR-FLEPIAKFYVSFFRSTPAILHIM 72 Query: 76 VIFYGLP----------HIGIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +I+ G+P +G+ + V +II+L+ AY++EI+RS II++ GQ Sbjct: 73 LIYLGIPLLVDFLSKSFGLGVXANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQM 132 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+Y++G T Q IR ++LPQ + ++ I L +TS+A+ + +PEI A + Sbjct: 133 EAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVA 192 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S Y L + A +Y LT I +E ++ ++ Sbjct: 193 SDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKY 230 >gi|90961557|ref|YP_535473.1| glutamine-binding protein / glutamine transport system permease protein [Lactobacillus salivarius UCC118] gi|90820751|gb|ABD99390.1| Glutamine-binding protein / Glutamine transport system permease protein [Lactobacillus salivarius UCC118] Length = 485 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 103/184 (55%), Gaps = 8/184 (4%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIF---FSDTIISLIMHFYVWIFRGTPLLVQLFV 76 IV TL + + + + I G I ++ + F+ I + I ++IFRG PLLV Sbjct: 286 GIVETLKLTVVGIIGATIFGILIGMLGVVPNKFAQGISTTI----IYIFRGLPLLVLALF 341 Query: 77 IFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+ G+P + G +F+A II+LTLN AY + ++ I ++ KGQ +A+ ++GL+ ++ Sbjct: 342 IYNGIPSLTGSKIPAFIAGIITLTLNEGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKS 401 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R +ILPQ + ++FI LK TS+ S I I E+ QT + I++ + I+ + Sbjct: 402 MRKVILPQGVKIMIPSFINQFIITLKDTSILSIIGILELTQTGKIIIARNLEGFRIWGII 461 Query: 196 AFVY 199 A +Y Sbjct: 462 AIMY 465 >gi|302024083|ref|ZP_07249294.1| amino acid ABC transporter, permease protein [Streptococcus suis 05HAS68] Length = 232 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 113/205 (55%), Gaps = 7/205 (3%) Query: 3 YEWFNLI--IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 Y W N + FP + + TL I+ +F++++ +G + + ++ +I Sbjct: 9 YAWENWVSYFKDFPTF-FQGFLFTLAISVGAFIMAMFLGIVFGSLSSSI-NKVLKIIARV 66 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIG--IVFDS-FVAIIISLTLNFSAYISEIIRSSIISI 117 YV ++ TPLLVQ +++YGLP I ++ S + +I + L AYI+E+IR+ I ++ Sbjct: 67 YVEYYQNTPLLVQFMIVYYGLPLISNYVLMPSIYWTAVICVGLYHGAYIAEVIRAGIEAV 126 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +A+ + G T+ +T+R IILPQ I T PL+++ ++++K+T+ + I+ +I Sbjct: 127 PTGQTEAALSQGFTQSETMRIIILPQAIPTILPPLTNQVVNLIKNTATVAIISGADIMFM 186 Query: 178 AQRIVSTTYQPLIIYCELAFVYLIL 202 + + + + AF+Y I+ Sbjct: 187 TKSWSAMNANYIPAFAGAAFLYFIM 211 >gi|311895158|dbj|BAJ27566.1| putative glutamate ABC transporter permease protein [Kitasatospora setae KM-6054] Length = 214 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 100/182 (54%), Gaps = 5/182 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI--FRGTPLLVQLFVIFYGL 81 TL + +S V++L++G +A R+ + L + W+ R TPL + F++ GL Sbjct: 18 TLWLTLVSAVLALVLGAVVAGFRV---SPVKPLRVFGTGWVTVLRNTPLTLLFFIVVLGL 74 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 P I F +++L SA++ E +RS + ++P GQ +A+ ++GLT QT+R ++L Sbjct: 75 PRFDITLPFFTFAVLALGCYTSAFVCETLRSGVNTVPTGQGEAARSLGLTFGQTLRLVVL 134 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ + PL S I++ K+T++A + ++ E+ T + I Y + + +A YL+ Sbjct: 135 PQAYRSVVAPLGSVMIALAKNTAIAGSFSVVELLGTYRTINELGYDIVWTFVWIAAGYLV 194 Query: 202 LT 203 LT Sbjct: 195 LT 196 >gi|296111214|ref|YP_003621595.1| glutamine ABC transporter, substrate binding and permease protein [Leuconostoc kimchii IMSNU 11154] gi|295832745|gb|ADG40626.1| glutamine ABC transporter, substrate binding and permease protein [Leuconostoc kimchii IMSNU 11154] Length = 482 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 52/142 (36%), Positives = 85/142 (59%), Gaps = 1/142 (0%) Query: 62 VWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 ++IFRG PL+V F I+ GLP IG+ +F A +I+L LN AY + +R ++ +G Sbjct: 324 IYIFRGLPLMVLAFFIYIGLPSVIGMKIPAFTAGLITLILNEGAYTAAFVRGGFEAVDRG 383 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++GL+ +++R +I+PQ + ++FI LK TS+ S I I E+ QT Sbjct: 384 QMEAARSLGLSYSKSMRKVIVPQGLKIMIPSFINQFIITLKDTSILSAIGILELTQTGSL 443 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 IVS Q ++ +A +YLI+ Sbjct: 444 IVSRNSQGFRVWAIVAVIYLIV 465 >gi|261821245|ref|YP_003259351.1| arginine transporter permease subunit ArtM [Pectobacterium wasabiae WPP163] gi|261605258|gb|ACX87744.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 222 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 100/172 (58%), Gaps = 12/172 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYG---------LPHI-GIVFDSFVAIIISLTLNF 102 ++SL+ Y+ +F GTPLLVQ+F+I+YG +P + ++ ++ +++L LN Sbjct: 43 VVSLLAKVYITLFTGTPLLVQIFLIYYGPGQFTAIQQIPWLWNLLSQPWLCAMVALALNS 102 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +++ ++ +IP GQW + A+G+ +KQT+R I+LP + S+E + + KS Sbjct: 103 AAYTTQLFYGAVKAIPAGQWQSCAALGMDQKQTLR-ILLPFAFKRALSSYSNEVVLVFKS 161 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+A TIT+ E+ +Q + TY ++++ +YL + ++ +E Sbjct: 162 TSLAYTITLMEVMGYSQLMYGRTYD-VMVFGAAGIIYLCVNGLLTLLMRWVE 212 >gi|153812543|ref|ZP_01965211.1| hypothetical protein RUMOBE_02942 [Ruminococcus obeum ATCC 29174] gi|149831468|gb|EDM86556.1| hypothetical protein RUMOBE_02942 [Ruminococcus obeum ATCC 29174] Length = 215 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 89/143 (62%), Gaps = 5/143 (3%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYG---LPHIGIVFDSFVAIIISLTLNFSAYISEII 110 +S I+ Y+ I RGTPL++QL + ++G L + I F AII+ +LN++AY +EI Sbjct: 46 LSWIVKAYISIMRGTPLMLQLLLWYFGPFYLWGMNIGNYKFTAIILGCSLNYAAYFAEIY 105 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 RS I SIP GQ++A+ +G + QT I+LPQ + +++E I+++K TS+ +++ Sbjct: 106 RSGIESIPVGQYEAAQLLGYNKSQTFFKIVLPQVVKIVLPSVTNEVITLVKDTSLVYSVS 165 Query: 171 IPEIFQTAQRIVS--TTYQPLII 191 E+F A++I + TT P +I Sbjct: 166 YIEMFALAKQIAAAQTTVVPFVI 188 >gi|16804385|ref|NP_465870.1| hypothetical protein lmo2347 [Listeria monocytogenes EGD-e] gi|47096045|ref|ZP_00233647.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 1/2a F6854] gi|224503523|ref|ZP_03671830.1| hypothetical protein LmonFR_13622 [Listeria monocytogenes FSL R2-561] gi|254826828|ref|ZP_05231515.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165] gi|254831228|ref|ZP_05235883.1| hypothetical protein Lmon1_07717 [Listeria monocytogenes 10403S] gi|254901127|ref|ZP_05261051.1| hypothetical protein LmonJ_14973 [Listeria monocytogenes J0161] gi|254938338|ref|ZP_05270035.1| amino acid ABC transporter [Listeria monocytogenes F6900] gi|255028989|ref|ZP_05300940.1| hypothetical protein LmonL_07141 [Listeria monocytogenes LO28] gi|16411835|emb|CAD00425.1| lmo2347 [Listeria monocytogenes EGD-e] gi|47015642|gb|EAL06573.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 1/2a F6854] gi|258599206|gb|EEW12531.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165] gi|258610950|gb|EEW23558.1| amino acid ABC transporter [Listeria monocytogenes F6900] Length = 235 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 112/218 (51%), Gaps = 18/218 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 A++ T+P+ ++ GF IA+ IR++ + I FYV FR TP ++ + Sbjct: 14 AMLKTIPLTLAMTFFPILFGFIIAIGLTLIRMYHVR-FLEPIAKFYVSFFRSTPAILHIM 72 Query: 76 VIFYGLP----------HIGIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +I+ G+P +GI + V +II+L+ AY++EI+RS II++ GQ Sbjct: 73 LIYLGIPLLVDFLSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQM 132 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+Y++G T Q IR ++LPQ + ++ I L +TS+A+ + +PEI A + Sbjct: 133 EAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVA 192 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S Y L + A +Y LT I +E ++ ++ Sbjct: 193 SDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKY 230 >gi|292492727|ref|YP_003528166.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC [Nitrosococcus halophilus Nc4] gi|291581322|gb|ADE15779.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Nitrosococcus halophilus Nc4] Length = 214 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 51/156 (32%), Positives = 87/156 (55%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ +FRGT LVQLF ++ LP +G+ + I L LN AY +E++R +I ++P+ Sbjct: 54 YIDLFRGTSALVQLFWAYFALPMLGVELSAMATGIWVLGLNIGAYGAEVVRGAIQAVPQE 113 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+ T +QT+ II+PQ I P + I +LKST++ S IT+ E+ Q Sbjct: 114 QREAAIALNFTPRQTLWRIIIPQAIPAMLPPFGNLLIELLKSTALVSMITLSELTFQGQM 173 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 + ++T + I+ + +Y +L I ++E Sbjct: 174 LRASTLRSAEIFALVLVLYFLLAQIIAFIIRRLERK 209 >gi|55821010|ref|YP_139452.1| amino acid ABC uptake transporter membrane-spanning protein, truncated [Streptococcus thermophilus LMG 18311] gi|55822929|ref|YP_141370.1| ABC transporter permease, truncated [Streptococcus thermophilus CNRZ1066] gi|55736995|gb|AAV60637.1| amino acid ABC uptake transporter membrane-spanning protein, truncated [Streptococcus thermophilus LMG 18311] gi|55738914|gb|AAV62555.1| ABC transporter permease protein, truncated [Streptococcus thermophilus CNRZ1066] Length = 137 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 47/123 (38%), Positives = 75/123 (60%), Gaps = 3/123 (2%) Query: 34 ISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 +S IIG F A++ F + Y+ RG P+LV LF++++GLP++GI + Sbjct: 1 MSFIIGNFFAILLAFMRMSQKPWLKYPARIYISFMRGVPMLVVLFILYFGLPYVGIQIPA 60 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 + II + +AY++EI RSSI ++ KGQW+A+ ++GL +K I HIILPQ + + Sbjct: 61 LLCAIIGFSTVSAAYMAEIFRSSISAVDKGQWEAAQSLGLPQKPIIHHIILPQALRIAVA 120 Query: 151 PLS 153 PL+ Sbjct: 121 PLA 123 >gi|264680313|ref|YP_003280223.1| glutamate/aspartate transporterpermease gltJ [Comamonas testosteroni CNB-2] gi|299532721|ref|ZP_07046109.1| glutamate/aspartate transport systempermease protein gltJ [Comamonas testosteroni S44] gi|262210829|gb|ACY34927.1| glutamate/aspartate transport systempermease protein gltJ [Comamonas testosteroni CNB-2] gi|298719356|gb|EFI60325.1| glutamate/aspartate transport systempermease protein gltJ [Comamonas testosteroni S44] Length = 250 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 103/181 (56%), Gaps = 3/181 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ +A +S VI+L++G I +R I + + +V +FR PLLVQ+F+ ++ +P Sbjct: 41 TVSVALLSLVIALVLGAVIGTLRTLPDRPWIVRLGNAWVELFRNIPLLVQVFIWYHVVPA 100 Query: 84 IGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 I S FV ++ ++ SA I+E +RS I ++P+GQ A A+G T QT R+++ Sbjct: 101 IFPAMKSLPGFVLVVFAIGFFTSARIAEQVRSGIQALPRGQRYAGMAVGFTTFQTYRYVL 160 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LP PL+SE +++ K++SVA +++ E+ A + T + + IY + +Y+ Sbjct: 161 LPMAFRIIIPPLTSEAMNVFKNSSVAFAVSVAELTMFAMQAQEETARGVEIYMAVTGLYV 220 Query: 201 I 201 I Sbjct: 221 I 221 >gi|157369896|ref|YP_001477885.1| arginine transporter permease subunit ArtM [Serratia proteamaculans 568] gi|157321660|gb|ABV40757.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 222 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 113/201 (56%), Gaps = 13/201 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG--- 80 +L + + +++L++ + VI + I++ ++ Y+ +F GTPLLVQ+F+I+YG Sbjct: 15 SLTLTITALIVALVLSLVLTVI-LTLKTPILTPLVKIYITLFTGTPLLVQIFLIYYGPGQ 73 Query: 81 LPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 P I ++ ++ +I+L LN +AY +++ ++ +IP GQW + A+G++R Sbjct: 74 FPAIREYPWLWNLLSQPWLCAMIALALNSAAYTTQLFYGAVRAIPAGQWQSCEALGMSRS 133 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q++R I+LP + S+E + + KSTS+A TIT+ E+ +Q + TY ++++ Sbjct: 134 QSLR-ILLPFAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQLMYGRTYD-VMVFG 191 Query: 194 ELAFVYLILTSFCYIIQIKIE 214 VYL + ++ +E Sbjct: 192 AAGLVYLCVNGLLTLLMRLVE 212 >gi|15802855|ref|NP_288882.1| histidine transport system permease protein [Escherichia coli O157:H7 EDL933] gi|15832446|ref|NP_311219.1| histidine transport system permease protein [Escherichia coli O157:H7 str. Sakai] gi|168748160|ref|ZP_02773182.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC4113] gi|168755063|ref|ZP_02780070.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC4401] gi|168761251|ref|ZP_02786258.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC4501] gi|168767937|ref|ZP_02792944.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC4486] gi|168772963|ref|ZP_02797970.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC4196] gi|168780166|ref|ZP_02805173.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC4076] gi|168787218|ref|ZP_02812225.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC869] gi|168798481|ref|ZP_02823488.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC508] gi|195935687|ref|ZP_03081069.1| histidine transport system permease protein [Escherichia coli O157:H7 str. EC4024] gi|208809152|ref|ZP_03251489.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC4206] gi|208813542|ref|ZP_03254871.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC4045] gi|208820591|ref|ZP_03260911.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC4042] gi|209398746|ref|YP_002271717.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC4115] gi|217327256|ref|ZP_03443339.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. TW14588] gi|254794201|ref|YP_003079038.1| histidine/lysine/arginine/ornithine ABC transporter membrane protein [Escherichia coli O157:H7 str. TW14359] gi|261223237|ref|ZP_05937518.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261259213|ref|ZP_05951746.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK966] gi|12516664|gb|AAG57437.1|AE005462_12 histidine transport system permease protein [Escherichia coli O157:H7 str. EDL933] gi|13362662|dbj|BAB36615.1| histidine transport system permease protein [Escherichia coli O157:H7 str. Sakai] gi|187771032|gb|EDU34876.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC4196] gi|188017229|gb|EDU55351.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC4113] gi|189002113|gb|EDU71099.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC4076] gi|189357714|gb|EDU76133.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC4401] gi|189362954|gb|EDU81373.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC4486] gi|189368266|gb|EDU86682.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC4501] gi|189372848|gb|EDU91264.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC869] gi|189378936|gb|EDU97352.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC508] gi|208728953|gb|EDZ78554.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC4206] gi|208734819|gb|EDZ83506.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC4045] gi|208740714|gb|EDZ88396.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC4042] gi|209160146|gb|ACI37579.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC4115] gi|209764888|gb|ACI80756.1| histidine transport system permease protein [Escherichia coli] gi|209764890|gb|ACI80757.1| histidine transport system permease protein [Escherichia coli] gi|209764892|gb|ACI80758.1| histidine transport system permease protein [Escherichia coli] gi|209764896|gb|ACI80760.1| histidine transport system permease protein [Escherichia coli] gi|217319623|gb|EEC28048.1| histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. TW14588] gi|254593601|gb|ACT72962.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|320192068|gb|EFW66713.1| Histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. EC1212] gi|320641136|gb|EFX10615.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ [Escherichia coli O157:H7 str. G5101] gi|320646524|gb|EFX15443.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ [Escherichia coli O157:H- str. 493-89] gi|320651621|gb|EFX20001.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ [Escherichia coli O157:H- str. H 2687] gi|320667893|gb|EFX34801.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ [Escherichia coli O157:H7 str. LSU-61] gi|326339661|gb|EGD63472.1| Histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. 1125] gi|326344123|gb|EGD67884.1| Histidine ABC transporter, permease protein HisQ [Escherichia coli O157:H7 str. 1044] Length = 228 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V+++IIG A ++ + + LI Y + RG P L Sbjct: 4 GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLS-QNRLSGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G TR Q R I+ P + + + + + ILKST++ S + + ++ + Q Sbjct: 123 HIEAARAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +T++P +YL+ T+ Sbjct: 183 AGKSTWEPFYFAIVCGVIYLVFTT 206 >gi|317153613|ref|YP_004121661.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] gi|316943864|gb|ADU62915.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] Length = 588 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 58/136 (42%), Positives = 81/136 (59%), Gaps = 9/136 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-----IGI-VFD---SFVAIIISLTLNFSAYISEIIR 111 YV +FR TPLL+QLF + LP+ I I +FD F I + A+++EIIR Sbjct: 98 YVELFRNTPLLIQLFFWNFALPYAFPEEIRIQLFDMNFEFWTATIGCGIFTGAFMAEIIR 157 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + I SIPKG +ASY+ GL QT+R IILP + PL SEF++ +K+TS+A TI + Sbjct: 158 AGIQSIPKGLLEASYSSGLNFSQTLRKIILPLSFREIIPPLGSEFLNNMKNTSLAMTIGV 217 Query: 172 PEIFQTAQRIVSTTYQ 187 E+ + Q + S TY Sbjct: 218 AELCWSMQEVYSLTYH 233 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 16/208 (7%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF----VIFYGLP 82 IA IS + S IG + + R + I + Y+ R PL++ +F VIF Sbjct: 387 IAVISIIGSFFIGLLVGMGRTA-KNRIFRIPSTVYIEFVRSIPLILVIFWTNTVIF---- 441 Query: 83 HIGIVFD----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 GIVF +F A I+LT F+AYI+E +R I +IP GQ +A+ A GL Q +R Sbjct: 442 --GIVFKIDIQTFWAGTIALTFFFAAYIAETVRGGIENIPVGQVEAATASGLGYFQIMRK 499 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY-QPLIIYCELAF 197 IILPQ + L FI+ K TS+ I + E+ + A I + P I+ +A Sbjct: 500 IILPQALKQMLPALVGMFIAAFKDTSLVYIIGVTELTRAAYAINNRIMIYPFEIFTTVAM 559 Query: 198 VYLILTSFCYIIQIKIESSVTQHTYSVD 225 +Y + + ++E ++ ++ Sbjct: 560 LYFVPSYLMSQYAKRLERKLSPENVKIE 587 >gi|298491368|ref|YP_003721545.1| polar amino acid ABC transporter inner membrane subunit ['Nostoc azollae' 0708] gi|298233286|gb|ADI64422.1| polar amino acid ABC transporter, inner membrane subunit ['Nostoc azollae' 0708] Length = 308 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 113/218 (51%), Gaps = 26/218 (11%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D++ L+ ++ +L +A +++ I+G A I F + ++ I YV +FR TPL Sbjct: 73 DTYILALWVGLINSLRVAIAGILLTTIVGI-TAGIASLFDNWLVRNISLVYVEVFRNTPL 131 Query: 71 LVQL-------FVIF---------YGLPHI--------GIVFD-SFVAIIISLTLNFSAY 105 L+QL F++F +GL H+ G F F +++ LT A+ Sbjct: 132 LLQLLFWYFGVFLVFPKVENKFYVWGLIHLSQNGIELPGFTFSPEFSTLLLGLTFYTGAF 191 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 I+EI+R I S+PKGQW+A ++GL IR +I PQ + PL+S+++++ K++S+ Sbjct: 192 IAEIVRGGIKSLPKGQWEAGLSLGLKPTLLIRLVIFPQALRVIIPPLTSQYLNLTKNSSL 251 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 A I P+I+ A + T + + + + YL L+ Sbjct: 252 AIAIGYPDIYFVASTTFNQTGKAVEVMILIMLTYLTLS 289 >gi|66047136|ref|YP_236977.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63257843|gb|AAY38939.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] Length = 248 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 57/170 (33%), Positives = 99/170 (58%), Gaps = 15/170 (8%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ IA ++++I+LI+G + V+R + ++S I YV IFR PLLVQLF+ ++ +P Sbjct: 32 TIAIAVVAWIIALILGSVLGVMRTV-PNRLVSGIAAVYVEIFRNVPLLVQLFIWYFLVPD 90 Query: 84 I-------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + +F+++++ L L +A + E +R+ I ++PKGQ A+ A+G Sbjct: 91 LLPENLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGF 150 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 Q +++LPQ PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 151 KLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|262044227|ref|ZP_06017295.1| polar amino acid ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038418|gb|EEW39621.1| polar amino acid ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 254 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 67/231 (29%), Positives = 116/231 (50%), Gaps = 40/231 (17%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---------IISLIMH 59 II+ + L ++T+ I ++ + G + + R+ ++ ++ + Sbjct: 8 IIEEYGPLFVDGALMTIKCTIICVILGTLWGLTLGLGRMAKAEHGPWKYILRYLVQFPVR 67 Query: 60 FYVWIFRGTPLLVQLFVIFYGL------PHIGIV-----------------FDSFVAIII 96 FYV FRGTPL VQ+ V+ + L P G++ + +F++ I+ Sbjct: 68 FYVSAFRGTPLFVQIMVVHFALVPLFINPRDGLLVTGGLMSADFARELRASYGAFLSCIV 127 Query: 97 SLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF 156 ++TLN AY+SEI R+ I SI KGQ +AS A+G+ +T+R +IL Q PL + Sbjct: 128 AITLNAGAYVSEIFRAGIQSIDKGQMEASRALGMPWWKTMRKVILLQAFRRILPPLGNNA 187 Query: 157 ISILKSTSVASTITIPEIFQTAQRIVSTTY----QPLIIYCELAFVYLILT 203 I+I+K +S+AS I + ++ A R VS Y +P Y ++ VY ++T Sbjct: 188 IAIVKDSSLASAIGLADL-AYAARTVSGAYATYWEP---YLTISLVYWVIT 234 >gi|255023478|ref|ZP_05295464.1| L-cystine transport system permease protein TcyM [Listeria monocytogenes FSL J1-208] Length = 235 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 112/218 (51%), Gaps = 18/218 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 A++ T+P+ ++ GF IA+ IR++ + I FYV FR TP ++ + Sbjct: 14 AMLKTIPLTLAMTFFPILFGFIIAIGLTLIRMYHVR-FLEPIAKFYVSFFRSTPAILHIM 72 Query: 76 VIFYGLP----------HIGIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +I+ G+P +GI + V +II+L+ AY++EI+RS I+++ GQ Sbjct: 73 LIYLGIPLLVDFLSKSFGLGITANKIPVVVFVIIALSFTAGAYLTEILRSGIMAVDIGQM 132 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+Y++G T Q IR ++LPQ + ++ I L +TS+A+ + +PEI A + Sbjct: 133 EAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVA 192 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S Y L + A +Y LT I +E ++ ++ Sbjct: 193 SDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKY 230 >gi|251788811|ref|YP_003003532.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247537432|gb|ACT06053.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 222 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 108/218 (49%), Gaps = 9/218 (4%) Query: 5 WFNLIIDSFPQL--LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF-- 60 W N D QL + IV T +A I +SL GF ++ F S + I H Sbjct: 5 WNNFYHDLMEQLPLVLNGIVGTFKLAAI---VSLS-GFLWGIVIFFLSISSQPAIKHLTK 60 Query: 61 -YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ F GTPL++ LFVI+YGLP GI F + TLN AY + + ++ ++ K Sbjct: 61 IYMDFFIGTPLILILFVIYYGLPQTGIHLSPFTVAVSGFTLNVGAYNAAYMTTAYNALNK 120 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 + +A+ G + Q R IILPQ + TS L+++ I+ +K +++A I E F Q Sbjct: 121 HETEAAVVQGFSSWQIFRLIILPQVLITSVPALTNQVINNIKDSTIAFLIQYTEFFSRIQ 180 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + ST ++ Y A VYL+ +F I+ IE + Sbjct: 181 EVASTNFEFFNAYLFAALVYLVFITFIVILSRVIERKL 218 >gi|152969251|ref|YP_001334360.1| glutamate/aspartate ABC transporter membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206577704|ref|YP_002239697.1| glutamate/aspartate ABC transporter, permease protein GltJ [Klebsiella pneumoniae 342] gi|238893715|ref|YP_002918449.1| glutamate/aspartate transport system permease [Klebsiella pneumoniae NTUH-K2044] gi|288936539|ref|YP_003440598.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|290510405|ref|ZP_06549775.1| glutamate/aspartate transport system permease [Klebsiella sp. 1_1_55] gi|330005984|ref|ZP_08305450.1| putative ATP synthase F0, A subunit [Klebsiella sp. MS 92-3] gi|150954100|gb|ABR76130.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206566762|gb|ACI08538.1| glutamate/aspartate ABC transporter, permease protein GltJ [Klebsiella pneumoniae 342] gi|238546031|dbj|BAH62382.1| glutamate/aspartate transport system permease [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288891248|gb|ADC59566.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] gi|289777121|gb|EFD85119.1| glutamate/aspartate transport system permease [Klebsiella sp. 1_1_55] gi|328536021|gb|EGF62429.1| putative ATP synthase F0, A subunit [Klebsiella sp. MS 92-3] Length = 246 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 117/214 (54%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ +T+ ++ +++I+ ++G ++R + +S I YV +FR PL+VQ F Sbjct: 25 LWSGFQITVALSISAWIIAFLVGSLFGILRTV-PNRFLSGIGTCYVELFRNVPLIVQFFT 83 Query: 77 IFYGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P +IG+ F S FV+ ++ L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVVPEFLPENIGMWFKSELDPNIQFFVSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLADMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+ + + +I +E V Sbjct: 204 YSAHAWESFTAITLAYVFINAVIMLIMYVVERKV 237 >gi|27383229|ref|NP_774758.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27356403|dbj|BAC53383.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 220 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 61/188 (32%), Positives = 99/188 (52%), Gaps = 2/188 (1%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W I+ S+ L + VT+ + V+ L+ G F A + + L+ ++ Sbjct: 2 YHWDFGILWSYRWLFLNGLGVTVGFTVVIVVLGLVFGLFGAFGSLSRLKAV-RLVALTFI 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 FR TP+LVQL +Y LP + G+ A ++L+L ++ SEIIR I+SI KGQ Sbjct: 61 EAFRCTPILVQLIWFYYALPILAGVEMTPITASALALSLYGGSFYSEIIRGGIVSIDKGQ 120 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A A+G+T Q +R I+LPQ I L ++ I K+TS+ S + +P++ +Q Sbjct: 121 SEAGAALGMTPGQAMRRIVLPQAIKRMIPALMNQSIIQFKNTSLVSVLAVPDLVYQSQVA 180 Query: 182 VSTTYQPL 189 +Y+PL Sbjct: 181 AHDSYRPL 188 >gi|326779151|ref|ZP_08238416.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Streptomyces cf. griseus XylebKG-1] gi|326659484|gb|EGE44330.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Streptomyces cf. griseus XylebKG-1] Length = 243 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 54/221 (24%), Positives = 118/221 (53%), Gaps = 9/221 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHF 60 ++F+L+++ FP++ + + VTL + +++ ++ F + ++ R+ + + +++ F Sbjct: 3 DFFSLLVEEFPRV-RSGLWVTLQATVLGALLAGVLAFALGLMAGSRLLLARGVSRVVVEF 61 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FRGT L +QLF ++Y +P + G + +++ LNF AY +E++R +I S+P+ Sbjct: 62 ----FRGTSLYIQLFWLYYAMPLLTGYELTPVICGVVAFGLNFGAYGAEVVRGAINSVPR 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ A+ L+ + + +ILPQ ++ I +LK+T + I+ ++ Q Sbjct: 118 GQYEAAIALNLSPSRRLWKVILPQAWVQMIPSFTNLLIQLLKATPLLWLISAADLMTVIQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ T + L Y L Y +L ++ +E S + Sbjct: 178 QLRDRTGETLTAYLTLLAAYFVLAYALTMLMNLLERSAKRR 218 >gi|295697367|ref|YP_003590605.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus tusciae DSM 2912] gi|295412969|gb|ADG07461.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus tusciae DSM 2912] Length = 222 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 53/146 (36%), Positives = 84/146 (57%), Gaps = 3/146 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYG---LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 Y+ FRGTPL VQ+ ++ + L + G D+ ++ I+L LN +AY++EI R+ I SI Sbjct: 60 YITFFRGTPLFVQILLLHFAVIPLFNGGRALDAQISGTIALLLNSAAYVAEIFRAGIQSI 119 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 +GQ +A+ ++GL Q + ++ILPQ PL +E I++LK +S+ + I EI Sbjct: 120 DRGQMEAARSLGLRAGQAMLYVILPQAFRRMLPPLGNEAIALLKDSSLLAVIAGGEIATQ 179 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 + P + LAFVYL+LT Sbjct: 180 MNLMFGRILSPWEPFLTLAFVYLVLT 205 >gi|302540685|ref|ZP_07293027.1| amino acid ABC transporter, permease [Streptomyces hygroscopicus ATCC 53653] gi|302458303|gb|EFL21396.1| amino acid ABC transporter, permease [Streptomyces himastatinicus ATCC 53653] Length = 256 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 52/147 (35%), Positives = 84/147 (57%), Gaps = 3/147 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y +F+ PLL +F+ ++GL + I D F A +SL + +SAY+SEI R++I I G Sbjct: 62 YTELFKNIPLLAIIFLTYFGLGSVDIRLDVFTAGCLSLIVFYSAYLSEIFRAAISGIHDG 121 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A+GL R H+I PQ + + ++ + +LK TS+ TI+ E+ A+ Sbjct: 122 QTEAGEALGLGRLSVFGHVIFPQALRLALPGTNTMLVDLLKGTSLLVTISAAELMSEARL 181 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCY 207 I S+T++ L +Y ++ VY L CY Sbjct: 182 ITSSTFRALEVYLVISAVYFAL---CY 205 >gi|163793473|ref|ZP_02187448.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199] gi|159181275|gb|EDP65790.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199] Length = 220 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 1/187 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + T+ I+ I VI LI G I + + + + L+M YV + RG P+LV + Sbjct: 16 LLQGFITTMEISAIVIVIGLIAGM-IGGLLLVYGPKPVRLLMRLYVDVLRGIPVLVLILF 74 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +YGL +G+ ++ A +++L SA++SE R +I SIP GQ +A+ AIGLT +Q Sbjct: 75 SYYGLALLGVNISAYTAGVVALAGFCSAHMSETFRGAIDSIPVGQTEAAKAIGLTFQQRF 134 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +++LPQ P + + ++K T++ S I + ++ Q+ ++ Y + Y Sbjct: 135 IYVLLPQAARRIVPPAINTAVEMVKGTTLLSIIGVLDVLLATQQTIARNYMVIEFYATAM 194 Query: 197 FVYLILT 203 Y +L Sbjct: 195 LFYFVLN 201 >gi|313885720|ref|ZP_07819469.1| putative glutamine ABC transporter, permease protein GlnM [Eremococcus coleocola ACS-139-V-Col8] gi|312619085|gb|EFR30525.1| putative glutamine ABC transporter, permease protein GlnM [Eremococcus coleocola ACS-139-V-Col8] Length = 216 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 58/193 (30%), Positives = 104/193 (53%), Gaps = 1/193 (0%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F A TL + I+ + S +IG +AV + + ++S I Y+ +FR PL Sbjct: 6 QNFSDQFLAGFGHTLLASAIALIASFVIGISMAVGQTS-HNKLLSTITTIYIEVFRNIPL 64 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LV + + +P GI + A II L+L S++++++++S I SIPKGQ +A +A GL Sbjct: 65 LVIVMFFYVVVPLYGIKVTGYQAGIIGLSLYTSSFVADVVKSGITSIPKGQKEAGFASGL 124 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 ++ Q HI+LPQ I L ++ I+++K++S+ + + +I I S ++ Sbjct: 125 SQSQVTFHIVLPQAINLVLPTLGNQIINLVKNSSILAMVAGLDIMYQGDLIASQSFNVFS 184 Query: 191 IYCELAFVYLILT 203 Y + YL++T Sbjct: 185 TYIIVGLFYLLIT 197 >gi|50121594|ref|YP_050761.1| arginine transporter permease subunit ArtM [Pectobacterium atrosepticum SCRI1043] gi|49612120|emb|CAG75570.1| arginine transport system permease protein [Pectobacterium atrosepticum SCRI1043] Length = 222 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 100/172 (58%), Gaps = 12/172 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYG---------LPHI-GIVFDSFVAIIISLTLNF 102 IIS++ Y+ +F GTPLLVQ+F+I+YG +P + ++ ++ +++L LN Sbjct: 43 IISMLAKGYITLFTGTPLLVQIFLIYYGPGQFTSIQQIPWLWSLLSQPWLCAMVALALNS 102 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +++ ++ +IP GQW + A+G+ +KQT+R I+LP + S+E + + KS Sbjct: 103 AAYTTQLFYGAVKAIPAGQWQSCAALGMNQKQTLR-ILLPFAFKRALSSYSNEVVLVFKS 161 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+A TIT+ E+ +Q + TY ++++ +YL + ++ +E Sbjct: 162 TSLAYTITLMEVMGYSQLMYGRTYD-VMVFGAAGIIYLCVNGLLTLLMRWVE 212 >gi|168236833|ref|ZP_02661891.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194735510|ref|YP_002113981.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251237|ref|YP_002145841.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|238913405|ref|ZP_04657242.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194711012|gb|ACF90233.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197214940|gb|ACH52337.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197290110|gb|EDY29467.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|322616362|gb|EFY13271.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619612|gb|EFY16487.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622692|gb|EFY19537.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628604|gb|EFY25391.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631541|gb|EFY28297.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637068|gb|EFY33771.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641733|gb|EFY38369.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644474|gb|EFY41014.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650065|gb|EFY46482.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654142|gb|EFY50465.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658057|gb|EFY54324.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663531|gb|EFY59733.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670267|gb|EFY66407.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671503|gb|EFY67625.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676859|gb|EFY72926.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682784|gb|EFY78803.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686463|gb|EFY82445.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323196083|gb|EFZ81246.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196771|gb|EFZ81915.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202950|gb|EFZ87984.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208990|gb|EFZ93927.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211895|gb|EFZ96723.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215173|gb|EFZ99918.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222376|gb|EGA06754.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223892|gb|EGA08191.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229851|gb|EGA13974.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233076|gb|EGA17172.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240811|gb|EGA24853.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243128|gb|EGA27148.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248670|gb|EGA32598.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251671|gb|EGA35538.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257341|gb|EGA41039.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261929|gb|EGA45495.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267945|gb|EGA51424.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271988|gb|EGA55403.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 222 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 121/220 (55%), Gaps = 18/220 (8%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ P+LL + +L + S ++L++ +I + ++ L+ Y+ +F GT Sbjct: 1 MLEYLPELL-KGLHTSLTLTVASIAVALVLALVFTIILTLKTPFVVWLV-RGYITLFTGT 58 Query: 69 PLLVQLFVIFYG------------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 PLLVQ+F+I+YG L H+ + + ++ +I+L+LN +AY +++ +I + Sbjct: 59 PLLVQIFLIYYGPGQFPTLQEYPLLWHL--LSEPWLCALIALSLNSAAYTTQLFYGAIRA 116 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQW + A+G+++K T+ I+LP + S+E + + KSTS+A TIT+ E+ Sbjct: 117 IPEGQWQSCGALGMSKKDTL-AILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMG 175 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 +Q + TY ++++ +YL++ ++ IE Sbjct: 176 YSQLLYGRTYD-VMVFGAAGVIYLVVNGLLTLMMRLIERK 214 >gi|163800420|ref|ZP_02194321.1| arginine ABC transporter, permease protein [Vibrio sp. AND4] gi|159175863|gb|EDP60657.1| arginine ABC transporter, permease protein [Vibrio sp. AND4] Length = 222 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 107/210 (50%), Gaps = 11/210 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 + A + +L + S V+ I+ + + I + + + + +F GTPLLVQ+F+ Sbjct: 9 MLAGLSTSLQLTAASLVVGCILALMMTLTLILRTPGL-HWVSRGIITLFTGTPLLVQIFL 67 Query: 77 IFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 ++YG V +S + +++L LN +AY +++ + + +IP GQW A A Sbjct: 68 VYYGPGQFDAVRESVFWTWLSQPWFCAMLALALNTAAYSAQLFKGAFNAIPSGQWQACRA 127 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ + T+ ++LP I + S+E I + K TS+ASTITI ++ AQRI + TY Sbjct: 128 LGMGKIATL-GVLLPYAIRRAVPAYSNEVILVFKGTSLASTITIMDLMGYAQRINAQTYD 186 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSV 217 L ++ YL + +I ++E Sbjct: 187 TLTVFGIAGAFYLTVNGVLTLIFRQVEKKA 216 >gi|332967816|gb|EGK06915.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Kingella kingae ATCC 23330] Length = 257 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 72/227 (31%), Positives = 114/227 (50%), Gaps = 36/227 (15%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF-------FSDTIISLIM--- 58 II + ++ +TL + + +++G F A+ RI F+ I L+ Sbjct: 15 IIWEYREMFVKGAWMTLKLTTWAVAGGVVLGLFGALARIVRVEKGGAFAKAIAWLLRTLS 74 Query: 59 HFYVWIFRGTPLLVQLFVIFYGL------PHIGIVFDSFVAIIIS------------LTL 100 YV +FRGTPL VQ+F+ + P G + +A I LT+ Sbjct: 75 GLYVTLFRGTPLYVQIFIWHFVWSTALINPTDGWLISGDLASEIRRNHAALVAGALALTV 134 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N AYI+EI R+ I SI KGQ +A+ ++GLT Q +RH+ILPQ + PL++EFI++L Sbjct: 135 NAGAYITEIFRAGIQSIDKGQMEAARSLGLTYPQAMRHVILPQALRRMLPPLANEFITLL 194 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQ----PLIIYCELAFVYLILT 203 K +S+ S I + E+ Q +S Y PL +A +YL+++ Sbjct: 195 KDSSLVSAIAVAEL-AYVQSTISGRYSIYEAPLYT---VALIYLVMS 237 >gi|284802788|ref|YP_003414653.1| hypothetical protein LM5578_2545 [Listeria monocytogenes 08-5578] gi|284995930|ref|YP_003417698.1| hypothetical protein LM5923_2495 [Listeria monocytogenes 08-5923] gi|293596749|ref|ZP_05264035.2| amino acid ABC transporter [Listeria monocytogenes J2818] gi|284058350|gb|ADB69291.1| hypothetical protein LM5578_2545 [Listeria monocytogenes 08-5578] gi|284061397|gb|ADB72336.1| hypothetical protein LM5923_2495 [Listeria monocytogenes 08-5923] gi|293592041|gb|EFG00376.1| amino acid ABC transporter [Listeria monocytogenes J2818] Length = 236 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 112/218 (51%), Gaps = 18/218 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 A++ T+P+ ++ GF IA+ IR++ + I FYV FR TP ++ + Sbjct: 15 AMLKTIPLTLAMTFFPILFGFIIAIGLTLIRMYHVR-FLEPIAKFYVSFFRSTPAILHIM 73 Query: 76 VIFYGLP----------HIGIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +I+ G+P +GI + V +II+L+ AY++EI+RS II++ GQ Sbjct: 74 LIYLGIPLLVDFLSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQM 133 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+Y++G T Q IR ++LPQ + ++ I L +TS+A+ + +PEI A + Sbjct: 134 EAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVA 193 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S Y L + A +Y LT I +E ++ ++ Sbjct: 194 SDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKY 231 >gi|259501520|ref|ZP_05744422.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus iners DSM 13335] gi|302191507|ref|ZP_07267761.1| ABC-type amino acid transport system, permease component [Lactobacillus iners AB-1] gi|309806871|ref|ZP_07700858.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LactinV 03V1-b] gi|309809565|ref|ZP_07703423.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners SPIN 2503V10-D] gi|259167038|gb|EEW51533.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus iners DSM 13335] gi|308166737|gb|EFO68929.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LactinV 03V1-b] gi|308170237|gb|EFO72272.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners SPIN 2503V10-D] Length = 212 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 55/159 (34%), Positives = 95/159 (59%), Gaps = 2/159 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N++++ +PQ + + T+ + I+ SLIIG A++ + I LI YV IFR Sbjct: 3 NILVNHWPQFM-QGLSSTIMCSLIAIFFSLIIGVICALVEVS-PCRIPHLIARIYVEIFR 60 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PLL+ + + + +P +G+ F A I+LTL SA+ISE ++S I SI GQ + + Sbjct: 61 NIPLLIIVMIFYLVVPQMGLKLTGFGAGTIALTLYTSAFISETVKSGINSIGIGQMEGAR 120 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 + G++ Q +R+++LPQ + PL ++FIS++K++SV Sbjct: 121 SNGMSYVQAMRYVVLPQALKVVIPPLGNQFISLIKNSSV 159 >gi|15889179|ref|NP_354860.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15156998|gb|AAK87645.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 267 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 109/196 (55%), Gaps = 13/196 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ +A + + L+IGF IA + + + L Y IFRG P L+ LF+++Y Sbjct: 52 GVKVTISLALATLPVGLLIGFLIA-LAAQSEEKSLRLAAGIYTTIFRGLPELLTLFIVYY 110 Query: 80 GL--------PHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 G+ ++G + ++FVA +++L++ FS+Y SE++ S+ +IPKGQ++A A Sbjct: 111 GVQMLLQSVAGYVGFSGPVEINAFVAGMLALSVVFSSYASEVLLSAFKAIPKGQYEAGDA 170 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL+R +T+ II+PQ + + +++ ++ +LK TS S I + +I + + + Sbjct: 171 LGLSRSRTMVLIIIPQLVRIALPGMTNLWVILLKDTSYVSIIGLADIIRQTGIAARVSKE 230 Query: 188 PLIIYCELAFVYLILT 203 Y +YLIL Sbjct: 231 AFFFYGIACLLYLILA 246 >gi|46190618|ref|ZP_00121272.2| COG0765: ABC-type amino acid transport system, permease component [Bifidobacterium longum DJO10A] gi|189438954|ref|YP_001954035.1| amino acid ABC transporter permease [Bifidobacterium longum DJO10A] gi|322689600|ref|YP_004209334.1| amino acid ABC transporter permease [Bifidobacterium longum subsp. infantis 157F] gi|322691561|ref|YP_004221131.1| amino acid ABC transporter permease [Bifidobacterium longum subsp. longum JCM 1217] gi|189427389|gb|ACD97537.1| ABC-type amino acid transport system permease component [Bifidobacterium longum DJO10A] gi|291516169|emb|CBK69785.1| amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-) [Bifidobacterium longum subsp. longum F8] gi|320456417|dbj|BAJ67039.1| amino acid ABC transporter permease component [Bifidobacterium longum subsp. longum JCM 1217] gi|320460936|dbj|BAJ71556.1| amino acid ABC transporter permease component [Bifidobacterium longum subsp. infantis 157F] Length = 219 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 104/192 (54%), Gaps = 6/192 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++W + + ++TL I+ ++++ +G A + I + I+ Sbjct: 1 MTFDWS--FVQRYAPFFVNGTLMTLFISVFGILLAIAVGLVCAGVEIA-RIPVARQIVRI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLLVQL+ +++GLP +G+V+ + I+ L +Y++E +R + ++P Sbjct: 58 YIELSRNTPLLVQLYFLYFGLPKLGVVWSAETCAIVGLGFLGGSYMAEAMRGGLEAVPNV 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q + +Y +GLT QTI +ILPQ ++T+ + + I + K +SV S I + ++ A+ Sbjct: 118 QRETAYVLGLTSTQTITRVILPQAVSTAIPGVVANVIFLFKESSVVSAIALADVMYMAKD 177 Query: 181 IVS---TTYQPL 189 ++ +TY+ L Sbjct: 178 LIGMYYSTYESL 189 >gi|253689164|ref|YP_003018354.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755742|gb|ACT13818.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 238 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 113/214 (52%), Gaps = 11/214 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL + S VI ++ +A+ R+ S + + ++FRGTPL VQL V + Sbjct: 22 GLAMTLWLLISSVVIGGLMALPLAIARVS-PRRRFSFPVWLFTYVFRGTPLYVQLLVFYS 80 Query: 80 GLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 G+ + IV ++F I++L LN AY +EI +I ++P G+ +A+ A G Sbjct: 81 GVYSLEIVRGTDLLNAFFRSGLNCAILALALNTCAYTTEIFAGAIRAVPHGEIEAARAYG 140 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 +R + R IILP + + S+E I +L ST++A T+T+P+I + A+ I + TYQP Sbjct: 141 FSRFKQYRCIILPGALRIALPAYSNEVILMLHSTALAFTVTVPDILKIARDINAATYQPF 200 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + A +YL ++ + + E +H Y+ Sbjct: 201 YAFGIAAVIYLAISFVLIGLFRRAERRWLRHLYT 234 >gi|237798794|ref|ZP_04587255.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021647|gb|EGI01704.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 242 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 110/208 (52%), Gaps = 12/208 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L + F LL +T+ +A +S +S+++G A ++ S ++ + Y + RG Sbjct: 14 LSLKGFGPLLLEGTWMTIKLAVLSLALSIVLGLIGATAKLS-SSALLRIPAQIYTTLIRG 72 Query: 68 TPLLVQLFVIFYGLPH-IGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIIS 116 P LV + +IFY L + ++ D+ F A +I+L + AY +E R +I+S Sbjct: 73 VPDLVLMLLIFYSLQTWLTMLTDAMEWEYIEINPFGAGVITLGFIYGAYFTETFRGAILS 132 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ +A+ A GL R Q R+++ PQ + + + + + +LK+T++ S I + ++ + Sbjct: 133 VPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALVSIIGLADLVK 192 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTS 204 +Q +TYQ A +YL++TS Sbjct: 193 ASQDAGKSTYQLFYFLILAALIYLMITS 220 >gi|121610314|ref|YP_998121.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121554954|gb|ABM59103.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 218 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 115/221 (52%), Gaps = 12/221 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++++++ P LL A+ TL + IS I+ ++GF +A + I +I+ + + Sbjct: 3 FDMLVNAAP-LLTKALGQTLLFSLISMCIAFVLGFLLAEVSIL-GGRVIAFVTRCLIEGV 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG PLLV +F+ +Y LP +GI D+ + I+L + FS Y++EI R + +IPK Q +A Sbjct: 61 RGVPLLVFVFLTYYSLPKLGIRLDAMYSGCIALAVFFSMYVAEIFRGAFRTIPKVQTEAG 120 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G++ + ++LPQ + + L + ++K+TSV S I + E+ +V T Sbjct: 121 MALGMSHWKIQIIVLLPQALRIALPSLMNIAAIVIKATSVMSIIGVWELTLATNELVMRT 180 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 P + +Y +L CY S V TY ++ Sbjct: 181 LAPFTFFVAALVLYFVL---CY-------SMVRSATYLSNR 211 >gi|330953425|gb|EGH53685.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 179 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 49/163 (30%), Positives = 93/163 (57%) Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 L + YV + RGTP+ V + +FY +P +G +F A I LTL +++SEI+R ++ Sbjct: 15 LPIRLYVDLIRGTPVFVLVLAVFYMVPALGWQISAFQAGAIGLTLFCGSHVSEIVRGALQ 74 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +IP+GQ +A AIGL Q++R+++LPQ + + I+K++++ S I + E+ Sbjct: 75 AIPRGQLEAGKAIGLRFGQSLRYVLLPQAMRQILPTWVNSSTEIVKASTLLSVIGVAELL 134 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 + Q++++ T+ L Y F++ ++ ++ +IE V Sbjct: 135 LSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLGRQIEKRVA 177 >gi|303328127|ref|ZP_07358566.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio sp. 3_1_syn3] gi|302861953|gb|EFL84888.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio sp. 3_1_syn3] Length = 230 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 111/215 (51%), Gaps = 2/215 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + ++ P +L A VT+ S + L++G +AV +++ + L+ YVW FRG Sbjct: 7 VFNALPAIL-AGSFVTIGNVTASLAMGLVLGVPLAVSQVYGGPWLRRLVA-LYVWFFRGV 64 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P+LV LF+ + +G+ D F+ + L +AY S+I R +I S+P+GQ A+ A+ Sbjct: 65 PILVLLFLCYGLFISLGLPADPFLICCLVLGCTSTAYQSQIFRGAIESLPQGQLKAARAL 124 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+ IR I+LPQ + S ++EF +LK +++ + +I + + T++ Sbjct: 125 GMNDFTGIRCIVLPQALRLSIPGWANEFSILLKDSAICYVLGTQDIMARTSFVAARTHEH 184 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 L +Y +Y +LT + ++E +V YS Sbjct: 185 LALYAAAGLIYFVLTLVVLKLLRRLEDNVHVPGYS 219 >gi|167550404|ref|ZP_02344161.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205324499|gb|EDZ12338.1| arginine ABC transporter, permease protein ArtM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 222 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 120/220 (54%), Gaps = 18/220 (8%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ P+LL + +L + S ++L++ +I + ++ L+ Y+ +F GT Sbjct: 1 MLEYLPELL-KGLHTSLTLTVASIAVALVLALVFTIILTLKTPFVVWLV-RGYITLFTGT 58 Query: 69 PLLVQLFVIFYG------------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 PLLVQ+F+I+YG L H+ + + ++ +I+L+LN +AY +++ +I + Sbjct: 59 PLLVQIFLIYYGPGQFPTLQEYPLLWHL--LSEPWLCALIALSLNSAAYTTQLFYGAIRA 116 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQW + A+G+ +K T+ I+LP + S+E + + KSTS+A TIT+ E+ Sbjct: 117 IPEGQWQSCGALGMGKKDTL-AILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMG 175 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 +Q + TY ++++ +YL++ ++ IE Sbjct: 176 YSQLLYGRTYD-VVVFGAAGVIYLVVNGLLTLMMRLIERK 214 >gi|257487793|ref|ZP_05641834.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 174 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 93/164 (56%) Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 L + YV + RGTP+ V + +FY +P +G +F A I LTL +++SEI+R ++ Sbjct: 9 RLPIRLYVDLIRGTPVFVLVLAVFYMVPALGWQISAFQAGAIGLTLFCGSHVSEIVRGAL 68 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IP+GQ +A AIGL Q++R+++LPQ + + I+K++++ S I + E+ Sbjct: 69 QAIPRGQLEAGKAIGLRFGQSLRYVLLPQAMRQILPTWVNSSTEIVKASTLLSVIGVAEL 128 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 + Q++++ T+ L Y F++ ++ ++ +IE V Sbjct: 129 LLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLGRQIEKRVA 172 >gi|205353467|ref|YP_002227268.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205273248|emb|CAR38211.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628559|gb|EGE34902.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 235 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 11/216 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL + S V+ ++ +AV R+ S+ I + + +IFRGTPL VQL V Sbjct: 20 FTGVAITLWLLISSVVMGGLLAVILAVGRVS-SNKFIHFPIWLFTYIFRGTPLYVQLLVF 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G+ + IV ++F +++LTLN AY +EI +I S+P G+ +A+ A Sbjct: 79 YSGMYTLEIVKGTDLLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + + R IIL + + S+E I +L ST++A T T+P++ + A+ I S TYQ Sbjct: 139 YGFSSFKMYRCIILLSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQ 198 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 P + A +YL+++ + + E QH S Sbjct: 199 PFTAFGIAAVLYLLISYVLISLFRRAERRWLQHVSS 234 >gi|301793799|emb|CBW36190.1| putative amino acid ABC transporter, permease protein [Streptococcus pneumoniae INV104] Length = 225 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 92/156 (58%), Gaps = 4/156 (2%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G F + I+ ++ H +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAMVLGIFFGAMSTS-KRPILRILAHIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 FYGLP I I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHTIMIPIYWTAVLCMGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYIS 136 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R IILPQT PL+++ ++++K+TS + I+ Sbjct: 137 AMRLIILPQTFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|33596591|ref|NP_884234.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella parapertussis 12822] gi|33573292|emb|CAE37273.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella parapertussis] Length = 213 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 48/127 (37%), Positives = 77/127 (60%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV +FRGT LV+LF ++ LP G+ + + I+ L N AY +E++R +I+++P G Sbjct: 54 YVEVFRGTSALVRLFWFYFVLPMFGMKLPALLVGIVVLGANAGAYGAEVVRGAILAVPAG 113 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+ LTR +TI IILPQ + P + I +LK+T++ S ITI ++ Q Sbjct: 114 QREAAVALNLTRARTIWRIILPQAVPAMLPPTGNLLIELLKNTALVSLITITDLTFRGQL 173 Query: 181 IVSTTYQ 187 + S T + Sbjct: 174 LRSETLR 180 >gi|186686345|ref|YP_001869541.1| polar amino acid ABC transporter inner membrane subunit [Nostoc punctiforme PCC 73102] gi|186468797|gb|ACC84598.1| polar amino acid ABC transporter, inner membrane subunit [Nostoc punctiforme PCC 73102] Length = 496 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 101/175 (57%), Gaps = 5/175 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +TL +S + LI G +++++I + + + + Y +FRGTPLL+QL +++Y Sbjct: 295 GIPLTLLFTLLSVTLGLIWGTILSLLKILGIKPL-TWVANAYTSVFRGTPLLLQLALVYY 353 Query: 80 GLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 P + G + A +++ TLN AY+SE IR I ++ KGQ +A+ ++G+ + Sbjct: 354 ATPQLTGYDISALEAGVLTFTLNSGAYMSETIRGGIQAVDKGQSEAAMSMGVPYWLMMWD 413 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY---QPLI 190 +ILPQ + L +E I +LK +++ STI + EI ++AQ + + Y +PL+ Sbjct: 414 VILPQALKNILPALVNETIGLLKDSALVSTIGVVEILRSAQIVGANKYIYFEPLL 468 >gi|300309410|ref|YP_003773502.1| glutamine ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300072195|gb|ADJ61594.1| ABC-type glutamine transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 250 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 28/205 (13%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI---------FFSDTIISLIMH 59 II + L +TL A I + G + V R+ +F + + Sbjct: 9 IIGEYLPLFVEGTWMTLKAAIICVIAGTCWGLVLGVGRLAEARHGFWKYFLCYCVQWPIR 68 Query: 60 FYVWIFRGTPLLVQLFVIFYGL------PHIGIV------------FDSFVAIIISLTLN 101 FYV RGTPL VQ+ +I + L P G++ + +F + ++++TLN Sbjct: 69 FYVSFLRGTPLFVQILLIHFALMPMLINPSGGLILSGDLAREIRSHYGAFASAVLAITLN 128 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 AY+SEI R+ I SI +GQ +AS ++G++ T+R ++LPQ PL + I+I+K Sbjct: 129 SGAYVSEIFRAGIQSIDRGQSEASRSLGMSYLATLRRVVLPQAFRRMLPPLGNNAIAIVK 188 Query: 162 STSVASTITIPEIFQTAQRIVSTTY 186 +S+AS I + E+ A R VS Y Sbjct: 189 DSSLASAIGLAEL-AYAARTVSGAY 212 >gi|261365769|ref|ZP_05978652.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria mucosa ATCC 25996] gi|288565672|gb|EFC87232.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria mucosa ATCC 25996] Length = 248 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 61/183 (33%), Positives = 102/183 (55%), Gaps = 27/183 (14%) Query: 61 YVWIFRGTPLLVQLFVI------FYGLPHIGIV------------FDSFVAIIISLTLNF 102 YV +FRGTPL VQ+ + F+ P G++ + + +A ++L N Sbjct: 69 YVTLFRGTPLFVQIVIWSYVWFPFFVHPTDGVLINGDQAVEIRRSYGALIAGSLALIANS 128 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AYI EI R+ I SI +GQ +A+ ++GL+ Q +R++ILPQ + PL+SEFI++LK Sbjct: 129 GAYICEIFRAGIQSIDRGQMEAARSLGLSYPQAMRYVILPQALRRMLPPLASEFITLLKD 188 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCE----LAFVYLILTSFCYIIQIKIESSVT 218 +S+ S I + E+ Q +S Y +Y E +A +YL++T+F + +++E+ Sbjct: 189 SSLLSVIAVAEL-AYVQSTISGRYS---VYEEPLYTVALIYLMMTTFLGWVFLRLENRYN 244 Query: 219 -QH 220 QH Sbjct: 245 PQH 247 >gi|330821199|ref|YP_004350061.1| cystine ABC transporter permease [Burkholderia gladioli BSR3] gi|327373194|gb|AEA64549.1| cystine ABC transporter permease [Burkholderia gladioli BSR3] Length = 217 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 1/198 (0%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 V+L +A + + + +G +A+ R + ++ + YV + R TP++ ++F+ +P Sbjct: 15 VSLLLALCAVAVGIPLGLLLALAR-WRRVPVLDRAIAAYVSVMRPTPVVTLCLLVFFVMP 73 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 G+ A ++L+LN +A+ EI R++++++P Q +A A G + QT+ I+LP Sbjct: 74 AAGLDLPPMAAATLALSLNTTAFNCEIWRAALLALPADQLEAGAAFGFSGWQTLVRIVLP 133 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q S PL SE +LK T AS I I +I + A RI + TY PL + +Y ++ Sbjct: 134 QLWRASLGPLVSEITLLLKITPAASVIGIVDITRAAGRIGADTYDPLPPFLAATVLYTLI 193 Query: 203 TSFCYIIQIKIESSVTQH 220 + Q +E Q Sbjct: 194 IALGVQGQRLLERRAAQR 211 >gi|188533324|ref|YP_001907121.1| Histidine transport system permease protein [Erwinia tasmaniensis Et1/99] gi|188028366|emb|CAO96227.1| Histidine transport system permease protein [Erwinia tasmaniensis Et1/99] Length = 228 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + ++++ +VTL +A S V ++++G A ++ S + + I Y + RG P L Sbjct: 4 GYSEVIFKGALVTLELALSSVVFAVLLGLIGAGAKLSNSRPLAA-IFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G D VA II+L + AY +E R + +S+PKG Sbjct: 63 VLMLLIFYGLQIALNQVTDFLGFAQFDIDPMVAGIITLGFIYGAYFTETFRGAWMSVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A G T QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 QVEAATAFGFTHSQTFRRILFPAMMRFALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T+QP +YLI T+ + +E T D Sbjct: 183 AGKSTWQPFWFAIVAGIIYLIFTTLSNGVLWWLERRYTVGVKRAD 227 >gi|309804200|ref|ZP_07698277.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LactinV 11V1-d] gi|309805504|ref|ZP_07699549.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LactinV 09V1-c] gi|309808678|ref|ZP_07702570.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LactinV 01V1-a] gi|312871462|ref|ZP_07731556.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LEAF 3008A-a] gi|312872438|ref|ZP_07732507.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LEAF 2062A-h1] gi|312874450|ref|ZP_07734480.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LEAF 2052A-d] gi|312874526|ref|ZP_07734551.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LEAF 2053A-b] gi|315653363|ref|ZP_07906285.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners ATCC 55195] gi|325911895|ref|ZP_08174299.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners UPII 143-D] gi|325913433|ref|ZP_08175799.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners UPII 60-B] gi|329920206|ref|ZP_08277018.1| putative glutamine ABC transporter permease protein GlnM [Lactobacillus iners SPIN 1401G] gi|308163603|gb|EFO65873.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LactinV 11V1-d] gi|308165155|gb|EFO67393.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LactinV 09V1-c] gi|308168152|gb|EFO70278.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LactinV 01V1-a] gi|311089917|gb|EFQ48336.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LEAF 2053A-b] gi|311090062|gb|EFQ48476.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LEAF 2052A-d] gi|311092020|gb|EFQ50395.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LEAF 2062A-h1] gi|311092982|gb|EFQ51332.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LEAF 3008A-a] gi|315489288|gb|EFU78928.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners ATCC 55195] gi|325476401|gb|EGC79563.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners UPII 143-D] gi|325477202|gb|EGC80348.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners UPII 60-B] gi|328936427|gb|EGG32873.1| putative glutamine ABC transporter permease protein GlnM [Lactobacillus iners SPIN 1401G] Length = 212 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 55/159 (34%), Positives = 95/159 (59%), Gaps = 2/159 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N++++ +PQ + + T+ + I+ SLIIG A++ + I LI YV IFR Sbjct: 3 NILVNHWPQFM-QGLSSTIMCSLIAIFFSLIIGVICALVEVS-PCRIPHLIARIYVEIFR 60 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PLL+ + + + +P +G+ F A I+LTL SA+ISE ++S I SI GQ + + Sbjct: 61 NIPLLIIVMIFYLVVPQMGLKLTGFGAGTIALTLYTSAFISETVKSGINSIGIGQMEGAR 120 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 + G++ Q +R+++LPQ + PL ++FIS++K++SV Sbjct: 121 SNGMSYVQAMRYVVLPQALKVVIPPLGNQFISLIKNSSV 159 >gi|332654883|ref|ZP_08420625.1| amino acid ABC transporter, permease protein [Ruminococcaceae bacterium D16] gi|332516226|gb|EGJ45834.1| amino acid ABC transporter, permease protein [Ruminococcaceae bacterium D16] Length = 250 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 75/128 (58%), Gaps = 8/128 (6%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF-------DSFVAIIISLTLNFSAYI 106 ISL+ VWI RGTPL++Q+ +FY +P + F +A+ ++ +N++ Y Sbjct: 74 ISLVCRLLVWIIRGTPLVLQIIALFY-VPGMQKWFSWPSGESGRMLAVCVAFIINYACYF 132 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 SEI R I +PKGQ +A +G+T+ Q RHI L Q I P+S+E I+++K TS+A Sbjct: 133 SEIYRGGIQGVPKGQQEAGQVLGMTKLQIFRHITLLQMIKRIVPPMSNEIITLVKDTSLA 192 Query: 167 STITIPEI 174 I + E+ Sbjct: 193 RVIALQEV 200 >gi|226361360|ref|YP_002779138.1| ABC transporter permease protein [Rhodococcus opacus B4] gi|226239845|dbj|BAH50193.1| putative ABC transporter permease protein [Rhodococcus opacus B4] Length = 330 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 110/215 (51%), Gaps = 23/215 (10%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+ +T+ + V+ +G +AV R+ + ++ +I Y+W FR PL+VQL F Sbjct: 80 ALWMTVKLTLWGTVLGFALGVVLAVSRLSH-NPVLQVIAWVYIWAFRSIPLIVQLLFWFN 138 Query: 80 ----------GLP--------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 G+P + V F A +I L L+ +AY +EIIRS IIS+ GQ Sbjct: 139 ITYLYQTLSLGIPFGPAFFTFEVNGVISGFTAAVIGLALHQAAYSAEIIRSGIISVDHGQ 198 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++G+ R++ I+LPQ + ++E IS+ K TS+ ST+ I E+F Q I Sbjct: 199 IEAAQSLGIPRRRQFFKIVLPQAMRGILPNAANEVISLFKGTSIVSTMAIAELFYQVQVI 258 Query: 182 VSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 + PL++ + Y+ILT+ I Q +E Sbjct: 259 FGRNGRVVPLLMVATI--WYIILTTLLSIGQYYVE 291 >gi|260582107|ref|ZP_05849901.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus influenzae NT127] gi|260094739|gb|EEW78633.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus influenzae NT127] Length = 227 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 58/177 (32%), Positives = 101/177 (57%), Gaps = 10/177 (5%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS---------LTL 100 + + ++ Y+ +F GTPLLVQ F+I+ G + DS + ++S L L Sbjct: 41 ENKWVKRAVNLYLTLFTGTPLLVQFFLIYAGPGQFQWIIDSPLWYVLSNAWFCAALALAL 100 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N +AY +++ ++ +IPKGQW++ A+GL+R QT++ I++P + + S+E I + Sbjct: 101 NSAAYSTQLFHGAVKAIPKGQWESCAALGLSRLQTLK-ILIPYALKRALPSYSNEIILVF 159 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 K T++ASTITI +I A+++ T Y + IY +YLI+T ++ K+E V Sbjct: 160 KGTALASTITIMDIMGYARQLYGTEYDAITIYGIAGGIYLIITGIATLLLRKLEKKV 216 >gi|238896098|ref|YP_002920834.1| glutamine ABC transport system ATP-binding component [Klebsiella pneumoniae NTUH-K2044] gi|238548416|dbj|BAH64767.1| glutamine ABC transport system ATP-binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 506 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 112/195 (57%), Gaps = 15/195 (7%) Query: 1 MKYEW---FNLI-IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 M ++W F+L I +F + A V + I+ +S+ I L++GF +A ++ + + + Sbjct: 1 MAFDWGYFFSLFSIGAF----WQACVTVIVISTLSWGIGLVVGFLLACAKLS-APRWVKI 55 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIR 111 + Y+W FR PL+V L V Y LP + ++ F+A ++S+T+ +AY++EI R Sbjct: 56 PVELYIWFFRSVPLMV-LLVFVYNLPQLFPVTQPLLGVPFIAGLVSMTVTEAAYMAEIHR 114 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++S+ KGQ +A +A+ + R I++PQ S L +E+I+I+K +S+ S +++ Sbjct: 115 GGLLSVAKGQSEAGHALSFSFIGIQRLIVIPQAFRISQPTLINEYITIIKLSSILSVVSL 174 Query: 172 PEIFQTAQRIVSTTY 186 PE+ T QR+ + + Sbjct: 175 PELLLTGQRLYAQNF 189 >gi|239820264|ref|YP_002947449.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] gi|239805117|gb|ACS22183.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 264 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 59/151 (39%), Positives = 88/151 (58%), Gaps = 1/151 (0%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISE 108 ++ I+ + Y+ +FR TP+LVQL +Y LP + G+ + A + LTL A+ SE Sbjct: 92 TNPYITAPLRAYIEVFRCTPVLVQLVWFYYALPVLTGLELSATAAATLCLTLYGGAFYSE 151 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I+R IISI GQ +A A+G+TR Q +R I+LPQ PL S+ I LK+TS+ S Sbjct: 152 IVRGGIISIEAGQTEAGKALGMTRLQLLRRILLPQAFKKMVPPLMSQSIMQLKNTSLLSV 211 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 + +P++ Q I TY+PL +Y +A Y Sbjct: 212 LAVPDLLYQGQVIAHDTYRPLELYTFIAIAY 242 >gi|160894717|ref|ZP_02075492.1| hypothetical protein CLOL250_02268 [Clostridium sp. L2-50] gi|156863651|gb|EDO57082.1| hypothetical protein CLOL250_02268 [Clostridium sp. L2-50] Length = 228 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 62/180 (34%), Positives = 94/180 (52%), Gaps = 22/180 (12%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFS 103 +S +M F VWI RGTPL++Q+ +I+Y P G+VF + FVA +S +N++ Sbjct: 51 LSYLMKFIVWIVRGTPLMIQMLIIYY-FP--GLVFHNPIWGGGEGGRFVAASVSFIVNYA 107 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 Y SEI R I IP GQ +A +G+T +Q + L Q I +S+E I+++K T Sbjct: 108 CYFSEIYRGGIQGIPVGQEEAGLVLGMTPRQIFFKVKLLQMIKKIVPAMSNEIITLVKDT 167 Query: 164 SVASTITIPEI------FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 S+A I + EI F + +S PL +C AF YLI ++ K+E + Sbjct: 168 SLARIIALQEIIWAGQAFMKGSQGISGAIWPL-FFC--AFYYLIWNGVLTVLLGKLEKKL 224 >gi|237808391|ref|YP_002892831.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] gi|237500652|gb|ACQ93245.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] Length = 229 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 58/179 (32%), Positives = 103/179 (57%), Gaps = 19/179 (10%) Query: 32 FVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIFYG----LPHI 84 VIS+ +GF +AV+ + F Y + RGTPLLVQL++++YG LP I Sbjct: 24 LVISVSLGFCLAVVLALLQVMGPKPLAKFSSGYCTLLRGTPLLVQLWLLYYGVGSLLPMI 83 Query: 85 GIVFDSFVAII---------ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 + SF+ + ++ TLN++AY + ++R++++S+PKG+ +A A G++R Sbjct: 84 PGIRHSFMWPVLREGFFFASVTFTLNYAAYEAVVLRAALLSVPKGEIEAGKAFGMSRWTL 143 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPLII 191 IR + LP+ I + ++ E + LK+T +A T+T+ +++ A +I T Y+PLI+ Sbjct: 144 IRRVWLPRAIRIALPTIAGEVVLQLKATPLAFTVTVMDLYSVAYKIRQDTLLVYEPLIL 202 >gi|152986188|ref|YP_001349726.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Pseudomonas aeruginosa PA7] gi|150961346|gb|ABR83371.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Pseudomonas aeruginosa PA7] Length = 222 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 49/161 (30%), Positives = 92/161 (57%), Gaps = 2/161 (1%) Query: 61 YVWIFRGTPLLVQLFVIFY--GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y+ +FRGT LLVQLF +F+ LP + ++ I+ L L+ AY +E++R +I S+P Sbjct: 54 YIELFRGTSLLVQLFWLFFVLPLPPFNLDLGAYTVAILGLGLHIGAYGAEVMRGAIGSVP 113 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ++A+ A+ +T R I+LPQ + + P ++ I +LK+TS+ S IT+ ++ A Sbjct: 114 RGQYEAALALNMTPFTRFRRIVLPQALLCAIPPGTNLLIELLKNTSLVSLITLSDLAFRA 173 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 +++ T++ L I+ +Y + + ++E + Sbjct: 174 RQLDQATFETLKIFSLTLVLYFAMAQVIVFLMRRLERRLGH 214 >gi|300690824|ref|YP_003751819.1| amino acid transmembrane abc transporter protein [Ralstonia solanacearum PSI07] gi|299077884|emb|CBJ50523.1| putative amino acid transmembrane abc transporter protein [Ralstonia solanacearum PSI07] Length = 231 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 62/227 (27%), Positives = 122/227 (53%), Gaps = 17/227 (7%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ + Q L ++++ + ++FV++L + +A++R+ + + + I YV R Sbjct: 9 LLSGQYHQWLVTGFLLSVKLTVLAFVLALPLAIAVALLRLAPAAPLRA-IGQTYVEAIRN 67 Query: 68 TPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 PLL + ++G P + + +++ A+I +L L +AY++E IRS I SI Sbjct: 68 VPLLAHMLFWYFGAPQLLPMSVKTWLYNLNYEAASAVI-ALVLYTAAYMAEDIRSGIRSI 126 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PK Q +AS A+GL Q +R ++LPQ++ + P+ S+ +++ K++S+A I + E+ Sbjct: 127 PKEQLEASRALGLGFLQAMRLVVLPQSLRVTVPPMVSQTLNLWKNSSIAMVIGVAELMYQ 186 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 AQ++ S T++ + YL ++ + I + S+ QH Y V Sbjct: 187 AQQVESATFRGFEAFAFATAAYLSIS-----MAITVFSAWYQHRYPV 228 >gi|161503950|ref|YP_001571062.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865297|gb|ABX21920.1| hypothetical protein SARI_02042 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 222 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 121/220 (55%), Gaps = 18/220 (8%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ P+LL + +L + S ++L++ +I + ++ L+ Y+ +F GT Sbjct: 1 MLEYLPELL-KGLHTSLTLTVASIAVALVLALVFTIILTLKTPFMVWLV-RGYITLFTGT 58 Query: 69 PLLVQLFVIFYG------------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 PLLVQ+F+I+YG L H+ + + ++ +I+L+LN +AY +++ +I + Sbjct: 59 PLLVQIFLIYYGPGQFPTLQEYPLLWHL--LSEPWLCALIALSLNSAAYTTQLFYGAIRA 116 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQW + A+G+++K T+ I+LP + S+E + + KSTS+A TIT+ E+ Sbjct: 117 IPEGQWQSCGALGMSKKDTL-AILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMG 175 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 +Q + TY ++++ +YL++ ++ IE Sbjct: 176 YSQLLYGRTYD-VMVFGAAGVIYLVVNGLLTLMMRLIERK 214 >gi|156933098|ref|YP_001437015.1| hypothetical protein ESA_00908 [Cronobacter sakazakii ATCC BAA-894] gi|156531352|gb|ABU76178.1| hypothetical protein ESA_00908 [Cronobacter sakazakii ATCC BAA-894] Length = 228 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F Q++ +VTL +A + V+S+ IG A ++ + ++LI Y + RG P L Sbjct: 4 GFSQVILQGALVTLELALSAVVLSVAIGLVGAGAKLS-RNRPMALIFEAYTTLIRGVPDL 62 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G D +A II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNAITDALGFSQFDIDPMIAGIITLGFIYGAYFTETFRGAYLAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G T QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTGSQTFRRILFPSMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T+QP +YL+ T+ + + +E T D Sbjct: 183 AGKSTWQPFYFAIVCGLIYLVFTTLSNGVLLLLERRYTVGVKRAD 227 >gi|239983305|ref|ZP_04705829.1| glutamate transporter permease [Streptomyces albus J1074] Length = 214 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 107/200 (53%), Gaps = 8/200 (4%) Query: 7 NLIIDSFPQLLYA-AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI- 64 N++ D+F Y + T+ + + +++L +GF +A R+ + SL W+ Sbjct: 2 NVLTDNFST--YGKGFLGTVELTVYASLLALALGFLMASFRV---APVASLRFFGTAWVT 56 Query: 65 -FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 R TPL + F + GLP G+V + +++L SA+I E +RS I ++P+GQ + Sbjct: 57 VLRNTPLTLLFFAVLLGLPRFGLVLPFQLFAVLALGCYTSAFICEALRSGINTVPRGQGE 116 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++G+T QT+ ++LPQ + P+ S I++ K++++A ++ E+ T + + Sbjct: 117 AARSLGMTFGQTLSAVVLPQAFRSVIAPVGSTLIALAKNSAIAGAFSVTELLGTYRTLSE 176 Query: 184 TTYQPLIIYCELAFVYLILT 203 Y + + +A YLI+T Sbjct: 177 LGYNIIWTFVWIALGYLIIT 196 >gi|222109009|ref|YP_002551275.1| hypothetical protein Arad_14101 [Agrobacterium radiobacter K84] gi|221727931|gb|ACM30981.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 232 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/193 (29%), Positives = 109/193 (56%), Gaps = 6/193 (3%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P +LY + +T+ I+ ++ +I+ +G ++V+ ++ + + I Y+ FRGTP+LVQ Sbjct: 13 PSILYY-LPITIYISVVAMIIAAALGLGLSVM--LQANRLTAAIARVYISFFRGTPVLVQ 69 Query: 74 LFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L +I++GLP + + A+II L L+ +AY++EI R+++ ++ GQ +A+ +IGL Sbjct: 70 LLIIYFGLPQLFPAALGISPVNAVIIGLGLHTAAYLAEIFRAALAAVGPGQKEAALSIGL 129 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T Q ++ Q I + P + FI ++K++S+A T+ + E+ ++ + S + Sbjct: 130 TPVQAFTDVVARQAIRHAIPPTGNIFIGLVKNSSLAFTLGVTEVLAQSKLLASENLKFFE 189 Query: 191 IYCELAFVYLILT 203 Y VY T Sbjct: 190 AYFAAGLVYWAFT 202 >gi|56414022|ref|YP_151097.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362945|ref|YP_002142582.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56128279|gb|AAV77785.1| arginine transport system permease protein ArtM [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094422|emb|CAR59938.1| arginine transport system permease protein ArtM [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 222 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 121/218 (55%), Gaps = 14/218 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ P+LL + +L + S ++L++ +I + ++ L+ Y+ +F GT Sbjct: 1 MLEYLPELL-KELHTSLTLTVASIAVALVLALVFTIILTLKTPFVVWLV-RGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPTLQEYPLLWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW + A+G+++K T+ I+LP + S+E + + KSTS+A TIT+ E+ + Sbjct: 119 EGQWQSCGALGMSKKDTL-AILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYS 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 Q + TY ++++ +YL++ ++ IE Sbjct: 178 QLLYGRTYD-VVVFGAAGVIYLVVNGLLTLMMRLIERK 214 >gi|23464701|ref|NP_695304.1| permease protein of ABC transporter system [Bifidobacterium longum NCC2705] gi|227546807|ref|ZP_03976856.1| ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|23325266|gb|AAN23940.1| permease protein of ABC transporter system [Bifidobacterium longum NCC2705] gi|227212769|gb|EEI80650.1| ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 248 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 105/194 (54%), Gaps = 6/194 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++W + + ++TL I+ ++++ +G A + I + I+ Sbjct: 30 MTFDWS--FVQRYAPFFVNGTLMTLFISVFGILLAIAVGLVCAGVEIA-RIPVARQIVRI 86 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLLVQL+ +++GLP +G+V+ + I+ L +Y++E +R + ++P Sbjct: 87 YIELSRNTPLLVQLYFLYFGLPKLGVVWSAETCAIVGLGFLGGSYMAEAMRGGLEAVPNV 146 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q + +Y +GLT QTI +ILPQ ++T+ + + I + K +SV S I + ++ A+ Sbjct: 147 QRETAYVLGLTSTQTITRVILPQAVSTAIPGVVANVIFLFKESSVVSAIALADVMYMAKD 206 Query: 181 IVS---TTYQPLII 191 ++ +TY+ L + Sbjct: 207 LIGMYYSTYESLFM 220 >gi|227877817|ref|ZP_03995841.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256844626|ref|ZP_05550111.1| glutamine ABC transporter permease [Lactobacillus crispatus 125-2-CHN] gi|256850695|ref|ZP_05556119.1| glutamine ABC transporter permease [Lactobacillus crispatus MV-1A-US] gi|293381614|ref|ZP_06627598.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] gi|295692448|ref|YP_003601058.1| glutamine ABC transporter, permease protein [Lactobacillus crispatus ST1] gi|227862578|gb|EEJ70073.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256613167|gb|EEU18371.1| glutamine ABC transporter permease [Lactobacillus crispatus 125-2-CHN] gi|256712466|gb|EEU27463.1| glutamine ABC transporter permease [Lactobacillus crispatus MV-1A-US] gi|290921798|gb|EFD98816.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] gi|295030554|emb|CBL50033.1| Glutamine ABC transporter, permease protein [Lactobacillus crispatus ST1] Length = 213 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/176 (33%), Positives = 100/176 (56%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ V SLI+G A++ + S +I Y+ IFR PLLV + + + +P + Sbjct: 23 SIIALVFSLILGVIFALLEVAPSK-FGQVIAKIYIAIFRNIPLLVIVMIFYLIVPRYIVK 81 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 F A I LTL SA+I+E +R+ I SI GQ + + + G+T Q +R++ILPQ + Sbjct: 82 LSGFQAGTIGLTLYTSAFIAETVRAGINSIGTGQMEGARSNGMTYVQAMRYVILPQAMKI 141 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++SV + + ++ AQ I +T+Q + Y + YLILT Sbjct: 142 VIPPLGNQFVNLVKNSSVLAFVAGFDLMYQAQLIAFSTFQTIDTYIIVGLFYLILT 197 >gi|222081073|ref|YP_002540436.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725752|gb|ACM28841.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 221 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 119/214 (55%), Gaps = 11/214 (5%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 +++++ D+ PQLL A VT+ I +SFVI +I +AV R + L +V + Sbjct: 7 YWSIVWDALPQLL-AGAWVTVQITILSFVIGTLIAMPMAVARQRETGLGYRLATA-WVEL 64 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 R TP+L Q+F+I++GL +GI S+++++ +++ N + Y++EI R I +IP+ Q+ A Sbjct: 65 SRNTPVLFQVFMIYFGLGALGINISSYISVLAAISFNNAGYLAEIFRGGIAAIPRQQFSA 124 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G+T Q+ H++ PQ + ++ I + +TS+ + + E+ AQ S Sbjct: 125 ARSLGMTSFQSFMHVVFPQVFQVIFLAFVTQGIWGMLNTSLGMLVGLRELAGAAQYAQSV 184 Query: 185 TYQPLIIYCELAFVYLILTS-FCYIIQIKIESSV 217 +++ F + I+T+ F Y+I ++ S Sbjct: 185 SFRT--------FEFFIVTAGFYYVIAKALQLSA 210 >gi|295839709|ref|ZP_06826642.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease [Streptomyces sp. SPB74] gi|197700002|gb|EDY46935.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease [Streptomyces sp. SPB74] Length = 340 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 114/216 (52%), Gaps = 23/216 (10%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF- 78 + +TL + + V+ ++G +A+ R+ ++ ++S + Y+W FR TP+LVQL F Sbjct: 119 GLGLTLWLTALVMVLGFVLGTLLALGRMS-ANPVLSWVSSGYIWFFRSTPILVQLLFWFN 177 Query: 79 ----YGLPHIGIVFD-SFVAI------------IISLTLNFSAYISEIIRSSIISIPKGQ 121 Y +GI F FV + ++ LTL+ +AY +E++R ++S+ +GQ Sbjct: 178 IGALYPRLGLGIPFGPEFVTVKTVNLLGPVTVAVLGLTLHEAAYAAEVVRGGLLSVDRGQ 237 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++GL+ + +R I+LPQ + P + I LK TS+ S I + ++ + Q + Sbjct: 238 IEAAQSLGLSPWRRLRRIVLPQAMRAIVPPAGNMLIGALKGTSIVSVIAVQDLLYSVQLV 297 Query: 182 VSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIES 215 TYQ PL++ + Y ++TS + Q +E Sbjct: 298 YHRTYQVIPLLLVATI--WYALVTSVLSVGQHYVEK 331 >gi|27379090|ref|NP_770619.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27352240|dbj|BAC49244.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 216 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 109/207 (52%), Gaps = 10/207 (4%) Query: 17 LYAAI--VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 L+AA+ V L + ++F L +G + I F + M + + + PL+ L Sbjct: 12 LFAALRWTVALVVLALAFGAPLALGLAMGRISRFAG---LRWTMTACIQVIQSVPLIGLL 68 Query: 75 FVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 F ++G+P +GI + VA+ ++ TL +A++ EI R + ++ + QW+A +GL+ Sbjct: 69 FFFYFGMPVFLGIQVPALVAVTVAYTLYTAAFLGEIWRGGLEAVKQAQWEAGACLGLSAW 128 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q RHII PQ + S P + ++K TS+AS + E+ + Q + + T+QPL+ Y Sbjct: 129 QQFRHIIAPQALRLSLPPTVGFLVQLIKGTSLASILGFVELARAGQVVSAATFQPLLTYA 188 Query: 194 ELAFVY----LILTSFCYIIQIKIESS 216 +A +Y L LT + ++ +++ S Sbjct: 189 LVAAIYFALCLPLTLWSRSLEARLDGS 215 >gi|119356996|ref|YP_911640.1| polar amino acid ABC transporter, inner membrane subunit [Chlorobium phaeobacteroides DSM 266] gi|119354345|gb|ABL65216.1| amino acid ABC transporter membrane protein, PAAT family [Chlorobium phaeobacteroides DSM 266] Length = 340 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/199 (33%), Positives = 109/199 (54%), Gaps = 15/199 (7%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+I ++ L+ + T+ I+ S V+ +G I +R+ + ++S+I Y+ I R Sbjct: 120 NIIHENRYLLILDGLKTTVIISVFSTVLGTFLGAMICFMRMS-RNRLLSVIAKSYISILR 178 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSF-----VAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 GTP+LV L ++FY +VF S + +I+ +NF+AY++EI R+ I SI KGQ Sbjct: 179 GTPVLVFLMLMFY------VVFASVDINPVIVSVIAFGMNFAAYVAEIYRAGINSIDKGQ 232 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A A+G T+ T IILPQT+ EFIS++K TSV I + ++ + + I Sbjct: 233 AEAGIAMGFTKVNTFLFIILPQTVLRILPVYKGEFISLVKMTSVVGYIAVQDLTKASDII 292 Query: 182 VSTTYQ---PLIIYCELAF 197 S T+ PL++ L F Sbjct: 293 RSRTFDAFFPLVMVAILYF 311 >gi|213691640|ref|YP_002322226.1| polar amino acid ABC transporter, inner membrane subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523101|gb|ACJ51848.1| polar amino acid ABC transporter, inner membrane subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457727|dbj|BAJ68348.1| amino acid ABC transporter permease component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 219 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 104/192 (54%), Gaps = 6/192 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++W + + ++TL I+ ++++ +G A + I + I+ Sbjct: 1 MTFDWS--FVQRYAPFFVNGTLMTLFISVFGILLAVAVGLVCAGVEIA-RIPVARQIVRI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLLVQL+ +++GLP +G+V+ + I+ L +Y++E +R + ++P Sbjct: 58 YIELSRNTPLLVQLYFLYFGLPKLGVVWSAETCAIVGLGFLGGSYMAEAMRGGLEAVPNV 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q + +Y +GLT QTI +ILPQ ++T+ + + I + K +SV S I + ++ A+ Sbjct: 118 QRETAYVLGLTSTQTITRVILPQAVSTAIPGVVANVIFLFKESSVVSAIALADVMYMAKD 177 Query: 181 IVS---TTYQPL 189 ++ +TY+ L Sbjct: 178 LIGMYYSTYESL 189 >gi|170695394|ref|ZP_02886540.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170139794|gb|EDT07976.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 246 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 102/183 (55%), Gaps = 13/183 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ ++VI+LI+G V+R + S I YV IFR PL+VQ F+ Sbjct: 26 LLSGFWVTITVSLSAWVIALIVGSLFGVLRTV-PNKWASGIGTLYVAIFRNIPLIVQFFI 84 Query: 77 IFYGLPH-----IGIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + +P IG F F + II L L +A + E +RS I ++P+GQ A Sbjct: 85 WYLVIPELLPASIGNWFKQLPPGAQFFSSSIICLGLFTAARVCEQVRSGINALPRGQRAA 144 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 145 GLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDY 204 Query: 185 TYQ 187 T Q Sbjct: 205 TSQ 207 >gi|157414760|ref|YP_001482016.1| amino acid ABC transporter permease [Campylobacter jejuni subsp. jejuni 81116] gi|157385724|gb|ABV52039.1| polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 81116] gi|315931092|gb|EFV10066.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni 327] Length = 233 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 20/200 (10%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I+ P L AA +T+ ++ + SLIIG F ++ +F I+ I Y+ Sbjct: 3 FDFILVQAPAFLTAA-WLTIKLSFFGIIFSLIIGLF-CILMSYFKIKILENICKLYIEFS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD------------------SFVAIIISLTLNFSAYIS 107 R TPLL+QLF ++Y LP I + SF I+ L+ +Y++ Sbjct: 61 RNTPLLIQLFFLYYALPKFNIHLEQIPPLDLICLSVEETLRPSFACAIVGLSFLGGSYMA 120 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E +R+ +I K Q++A ++G ++ +R++ILPQ + S +S+ I ++K TSV S Sbjct: 121 ESLRAGFEAIRKQQFEAGLSLGFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVS 180 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I +P++ + + S TY+ Sbjct: 181 IIALPDLVNLMKSLNSLTYK 200 >gi|296533326|ref|ZP_06895930.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296266342|gb|EFH12363.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 219 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 104/188 (55%), Gaps = 3/188 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMH 59 M ++ F F +L + VT+ + + VI+ ++G A++R S T + Sbjct: 1 MSFDSFLGSARDFLPILLQGVWVTIGVTLGALVIATLLGLVWALMRT--SGTRWLEWPAK 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 V RG P++VQLF I++ LP +GI +F A +I L + +SAY+ E+ RS ++++ Sbjct: 59 AVVNTLRGIPIIVQLFYIYFVLPDLGIDLTAFQAGVIGLGVAYSAYMGEVFRSGMLAVDP 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G +A+ ++GL+R + + +ILPQ P + I +LK +S AS IT+ EI ++ Sbjct: 119 GAVEAAESLGLSRLRIMTRVILPQATRIVLPPYGNMLIMMLKDSSQASVITVAEISTQSR 178 Query: 180 RIVSTTYQ 187 I S+T++ Sbjct: 179 MIASSTFK 186 >gi|283955889|ref|ZP_06373379.1| LOW QUALITY PROTEIN: polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 1336] gi|283792549|gb|EFC31328.1| LOW QUALITY PROTEIN: polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 1336] Length = 233 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 20/200 (10%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I+ P L AA +T+ ++ + SLIIG F ++ +F I+ I Y+ Sbjct: 3 FDFILVQAPAFLTAA-WLTIKLSFFGIIFSLIIGLF-CILMSYFKIKILENICKLYIEFS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD------------------SFVAIIISLTLNFSAYIS 107 R TPLL+QLF ++Y LP I + SF I+ L+ +Y++ Sbjct: 61 RNTPLLIQLFFLYYALPKFNIHLEQIPPLDLICLSVEETLRPSFACAIVGLSFLGGSYMA 120 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E +R+ +I K Q++A ++G ++ +R++ILPQ + S +S+ I ++K TSV S Sbjct: 121 ESLRAGFEAIRKQQFEAGLSLGFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVS 180 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I +P++ + + S TY+ Sbjct: 181 IIALPDLVNLMKSLNSLTYK 200 >gi|222094395|ref|YP_002528454.1| ABC transporter , permease; glutamine ABC transporter , permease [Bacillus cereus Q1] gi|221238452|gb|ACM11162.1| ABC transporter, permease; probable glutamine ABC transporter, permease [Bacillus cereus Q1] Length = 177 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 46/138 (33%), Positives = 85/138 (61%) Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R PL++ F+ ++ LP +GI + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ Sbjct: 21 RNIPLVLIAFIFYFALPVVGITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAA 80 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 + GLT Q + +I+LPQ + PL ++F++++K++S+ I ++ I + T Sbjct: 81 RSSGLTYVQGMYYIVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKT 140 Query: 186 YQPLIIYCELAFVYLILT 203 + +Y + YLILT Sbjct: 141 FVTFDVYIFVGMFYLILT 158 >gi|53728961|ref|ZP_00348281.1| COG4215: ABC-type arginine transport system, permease component [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 209 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 107/204 (52%), Gaps = 8/204 (3%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL +A S ++ L++ V+ IS ++ + RG P ++ + +IF+G Sbjct: 1 MTLGLALTSLIVGLLLSMLFVVLETS-KQPCISKPTSVFLALLRGLPEILVVLLIFFGST 59 Query: 83 HIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 + + F +F +++L+L FSAY S+ +R +I ++P GQW++ A+GL+R T Sbjct: 60 ELVEKITSEYVEFSAFSCGVLALSLIFSAYASQSLRGAIQAVPNGQWESGAALGLSRAHT 119 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 II+PQ + LS++++ +LK T++ S I + ++ + I + +QP Y Sbjct: 120 FLRIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLMRQTDLINTNEHQPFTWYGLA 179 Query: 196 AFVYLILTSFCYIIQIKIESSVTQ 219 A +YL +T +I +E T+ Sbjct: 180 ALIYLAITLISQVIIAGLEKRFTR 203 >gi|81428667|ref|YP_395667.1| amino acid ABC transporter permease/substrate-binding protein [Lactobacillus sakei subsp. sakei 23K] gi|78610309|emb|CAI55358.1| Putative amino acid ABC transporter, substrate binding/permease subunit [Lactobacillus sakei subsp. sakei 23K] Length = 487 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/146 (35%), Positives = 91/146 (62%), Gaps = 5/146 (3%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISI 117 Y+ RGTPL++Q+ +++G IG+ + + A +I+++LN +AY++EIIRS I +I Sbjct: 328 MYIEFVRGTPLMIQIMFVYFG---IGLWVNIPALFAGVIAVSLNSAAYVAEIIRSGINAI 384 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQ +AS ++GL++ T+R+IILPQ + L +EFIS++K +S+ S I + ++ Sbjct: 385 DAGQTEASRSLGLSQHDTMRYIILPQALKNIWPALGNEFISLIKESSIVSIIGVTDLIYQ 444 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 + + S TY+ + +Y ILT Sbjct: 445 LKVVQSATYKGVAPIFVAMVIYFILT 470 >gi|332524269|ref|ZP_08400491.1| ABC transporter permease [Rubrivivax benzoatilyticus JA2] gi|332107600|gb|EGJ08824.1| ABC transporter permease [Rubrivivax benzoatilyticus JA2] Length = 245 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 87/163 (53%), Gaps = 22/163 (13%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI------------------GIVFD----SFVAIIISL 98 Y+ +FR TPLLVQLF ++GLP + G+V F+A + L Sbjct: 58 YLSLFRNTPLLVQLFFWYFGLPALLPEDLLPWLNTPHELALGGLVLRWPSFEFLAAVTGL 117 Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158 +AY+ E IRS + +P GQ +A A+GLT Q +RH++LPQ + + PL ++++ Sbjct: 118 VFYSAAYVGEDIRSGLRGVPAGQREAGIALGLTPWQALRHVVLPQALRIALPPLLGQYMN 177 Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 ILK+TS+ I + E+ ++ + T++ +Y +Y++ Sbjct: 178 ILKNTSLGMAIGLLELSYRTRQAEAETWKTFQVYGVATLLYVV 220 >gi|221065074|ref|ZP_03541179.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas testosteroni KF-1] gi|220710097|gb|EED65465.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas testosteroni KF-1] Length = 250 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 103/181 (56%), Gaps = 3/181 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ +A +S VI+L++G I +R I + + +V +FR PLLVQ+F+ ++ +P Sbjct: 41 TVAVALLSLVIALVLGAVIGTLRTLPDRPWIVRLGNAWVELFRNIPLLVQVFIWYHVIPA 100 Query: 84 IGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 + S FV ++ ++ SA I+E +RS I ++P+GQ A A+G T QT R+++ Sbjct: 101 MVPAMKSLPGFVLVVFAIGFFTSARIAEQVRSGIQALPRGQRYAGMAVGFTTFQTYRYVL 160 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LP PL+SE +++ K++SVA +++ E+ A + T + + IY + +Y+ Sbjct: 161 LPMAFRIIIPPLTSEAMNVFKNSSVAFAVSVAELTMFAMQAQEETARGVEIYLAVTGLYV 220 Query: 201 I 201 I Sbjct: 221 I 221 >gi|16130243|ref|NP_416811.1| histidine/lysine/arginine/ornithine transporter permease subunit [Escherichia coli str. K-12 substr. MG1655] gi|89109128|ref|AP_002908.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|170081924|ref|YP_001731244.1| histidine/lysine/arginine/ornithine ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|194436195|ref|ZP_03068297.1| histidine ABC transporter, permease protein HisQ [Escherichia coli 101-1] gi|238901483|ref|YP_002927279.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli BW2952] gi|253772768|ref|YP_003035599.1| polar amino acid ABC transporter inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162317|ref|YP_003045425.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli B str. REL606] gi|256022007|ref|ZP_05435872.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia sp. 4_1_40B] gi|297520317|ref|ZP_06938703.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli OP50] gi|300948543|ref|ZP_07162637.1| arginine/ornithine transport protein [Escherichia coli MS 116-1] gi|300956424|ref|ZP_07168715.1| arginine/ornithine transport protein [Escherichia coli MS 175-1] gi|301023555|ref|ZP_07187319.1| arginine/ornithine transport protein [Escherichia coli MS 196-1] gi|301647589|ref|ZP_07247386.1| arginine/ornithine transport protein [Escherichia coli MS 146-1] gi|2507492|sp|P52094|HISQ_ECOLI RecName: Full=Histidine transport system permease protein hisQ gi|1788646|gb|AAC75368.1| histidine/lysine/arginine/ornithine transporter permease subunit [Escherichia coli str. K-12 substr. MG1655] gi|1799689|dbj|BAA16154.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|169889759|gb|ACB03466.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|194424923|gb|EDX40908.1| histidine ABC transporter, permease protein HisQ [Escherichia coli 101-1] gi|238861422|gb|ACR63420.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli BW2952] gi|242377941|emb|CAQ32710.1| hisQ, subunit of histidine ABC transporter and lysine/arginine/ornithine ABC Transporter [Escherichia coli BL21(DE3)] gi|253323812|gb|ACT28414.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974218|gb|ACT39889.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli B str. REL606] gi|253978385|gb|ACT44055.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli BL21(DE3)] gi|260448598|gb|ACX39020.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli DH1] gi|299880790|gb|EFI89001.1| arginine/ornithine transport protein [Escherichia coli MS 196-1] gi|300316773|gb|EFJ66557.1| arginine/ornithine transport protein [Escherichia coli MS 175-1] gi|300451953|gb|EFK15573.1| arginine/ornithine transport protein [Escherichia coli MS 116-1] gi|301074279|gb|EFK89085.1| arginine/ornithine transport protein [Escherichia coli MS 146-1] gi|309702620|emb|CBJ01949.1| histidine ABC transporter, permease protein [Escherichia coli ETEC H10407] gi|315136943|dbj|BAJ44102.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli DH1] gi|315615577|gb|EFU96209.1| histidine transport system permease protein hisQ [Escherichia coli 3431] gi|323936598|gb|EGB32885.1| inner membrane transport system [Escherichia coli E1520] gi|323940995|gb|EGB37182.1| inner membrane transport system [Escherichia coli E482] gi|323961381|gb|EGB56992.1| inner membrane transport system [Escherichia coli H489] gi|323973108|gb|EGB68301.1| inner membrane transport system [Escherichia coli TA007] gi|332344090|gb|AEE57424.1| histidine transport system permease protein HisQ [Escherichia coli UMNK88] Length = 228 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V+++IIG A ++ + + LI Y + RG P L Sbjct: 4 GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLS-QNRLSGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G TR Q R I+ P + + + + + ILKST++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTRGQVFRRIMFPSMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +T++P +YL+ T+ Sbjct: 183 AGKSTWEPFYFAIVCGVIYLVFTT 206 >gi|328886197|emb|CCA59436.1| amino acid ABC transporter, permease protein [Streptomyces venezuelae ATCC 10712] Length = 214 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 108/199 (54%), Gaps = 6/199 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI-- 64 +++ D+F L + T+ + + ++L++GF +A R+ + S + VW+ Sbjct: 2 DVLTDNF-SLYGEGFLGTVELTVYASALALVLGFLMASFRV---APVGSFRVFGTVWVTV 57 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 R TPL + F + GLP G+V + +++L SA+I E +RS I ++P+GQ +A Sbjct: 58 LRNTPLTLLFFAVMLGLPRFGLVLPFELFAVLALGCYTSAFICEALRSGINTVPRGQGEA 117 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G+T QT+ ++LPQ T P+ S I++ K++++A ++ E+ T + + Sbjct: 118 ARSLGMTFSQTLGTVVLPQAFRTVIPPIGSTLIALAKNSAIAGAFSVTELLGTYKTLSEL 177 Query: 185 TYQPLIIYCELAFVYLILT 203 Y + + +A YLI+T Sbjct: 178 GYNIVWTFVWIAVGYLIIT 196 >gi|327394608|dbj|BAK12030.1| histidine transport system permease protein HisQ [Pantoea ananatis AJ13355] Length = 228 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 105/206 (50%), Gaps = 12/206 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + ++ +VTL +A S ++++I+G A ++ + ++SLI Y + RG P L Sbjct: 4 GYSDVILKGTLVTLELALSSVLLAVILGLIGAGAKLS-RNRLLSLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G+ D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNHLTDALGLAQFDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A G T Q R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 QIEAATAFGFTGSQVFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFC 206 +T+QP +YL+ T+ Sbjct: 183 AGKSTWQPFYFAIVAGVIYLVFTTLS 208 >gi|262047082|ref|ZP_06020041.1| glutamine ABC transporter permease [Lactobacillus crispatus MV-3A-US] gi|312984302|ref|ZP_07791646.1| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus crispatus CTV-05] gi|260572659|gb|EEX29220.1| glutamine ABC transporter permease [Lactobacillus crispatus MV-3A-US] gi|310894320|gb|EFQ43398.1| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus crispatus CTV-05] Length = 213 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/176 (33%), Positives = 100/176 (56%), Gaps = 1/176 (0%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ V SLI+G A++ + S +I Y+ IFR PLLV + + + +P + Sbjct: 23 SIIALVFSLILGVIFALLEVAPSK-FGQVIAKIYIAIFRNIPLLVIVMIFYLIVPRYIVK 81 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 F A I LTL SA+I+E +R+ I SI GQ + + + G+T Q +R++ILPQ + Sbjct: 82 LSGFQAGTIGLTLYTSAFIAETVRAGINSIGTGQMEGARSNGMTYVQAMRYVILPQAMKI 141 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++SV + + ++ AQ I +T+Q + Y + YLILT Sbjct: 142 VIPPLGNQFVNLVKNSSVLAFVAGFDLMYQAQLIAFSTFQTIDTYIIVGLFYLILT 197 >gi|239620787|ref|ZP_04663818.1| permease protein of ABC transporter system [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239516363|gb|EEQ56230.1| permease protein of ABC transporter system [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 264 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 110/205 (53%), Gaps = 9/205 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++W + + ++TL I+ ++++ +G A + I + I+ Sbjct: 46 MTFDWS--FVQRYAPFFVNGTLMTLFISVFGILLAIAVGLVCAGVEIA-RIPVARQIVRI 102 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLLVQL+ +++GLP +G+V+ + I+ L +Y++E +R + ++P Sbjct: 103 YIELSRNTPLLVQLYFLYFGLPKLGVVWSAETCAIVGLGFLGGSYMAEAMRGGLEAVPNV 162 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q + +Y +GLT QTI +ILPQ ++T+ + + I + K +SV S I + ++ A+ Sbjct: 163 QRETAYVLGLTSTQTITRVILPQAVSTAIPGVVANVIFLFKESSVVSAIALADVMYMAKD 222 Query: 181 IVS---TTYQPLIIYCELAFVYLIL 202 ++ +TY+ L + L YL++ Sbjct: 223 LIGMYYSTYESLFM---LVVAYLVI 244 >gi|329296084|ref|ZP_08253420.1| glutamate/aspartate transport system permease protein gltJ [Plautia stali symbiont] Length = 246 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 104/180 (57%), Gaps = 14/180 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++C +++I+ ++G F ++R + +S I YV +FR PL+VQ F Sbjct: 25 LWSGFQVTVAVSCCAWIIAFLVGSFFGILRTV-PNRWLSTIGTCYVELFRNIPLIVQFFF 83 Query: 77 IFYGLPHI-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + P + G+ F + F++ I L L +A++ E +R++I S+P+GQ + Sbjct: 84 WYLVAPELVGEKLGMWFKAELDPNIQFFLSSTICLGLFTAAHVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++ P P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLPPNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDLAAQAGKLLD 203 >gi|306818522|ref|ZP_07452245.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus mulieris ATCC 35239] gi|307701066|ref|ZP_07638091.1| ABC transporter, permease protein [Mobiluncus mulieris FB024-16] gi|304648695|gb|EFM45997.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus mulieris ATCC 35239] gi|307614061|gb|EFN93305.1| ABC transporter, permease protein [Mobiluncus mulieris FB024-16] Length = 217 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 102/172 (59%), Gaps = 5/172 (2%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDS---FVAIIISLTLNFSAYISEI 109 ++ ++ FY+ I RGTPL++QL V+++G ++ G+ + F A+II+ +N++AY +EI Sbjct: 46 LAWVVQFYISIMRGTPLMLQLMVVYFGPYYLFGVQISAEYRFYAVIIAFAINYAAYFAEI 105 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +IP GQ +A++ +G ++++T I +PQ T +++E I+++K TS+A I Sbjct: 106 YRGGFQAIPAGQSEAAFVLGYSQRRTFFTIKVPQMFRTVLPSITNEVITLVKDTSLAFAI 165 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + E+F A++ S+T + + A Y + ++ ++E V+++ Sbjct: 166 SYTEMFTLAKQYASST-ASMAPFVAAAVFYYVFNIVVAVLMDRLEKHVSKYA 216 >gi|295109555|emb|CBL23508.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Ruminococcus obeum A2-162] Length = 215 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/173 (34%), Positives = 102/173 (58%), Gaps = 6/173 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG--- 80 TL I C++ + SL +G + R+ + S I+ Y+ I RGTPL++QL + ++G Sbjct: 17 TLLIFCLTLLFSLPLGMVVYFGRVSRFKPL-SWIIKAYISIMRGTPLMLQLLLWYFGPFY 75 Query: 81 LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 L + I F AII+ +LN++AY +EI RS I SI GQ++A+ +G + QT I+ Sbjct: 76 LWGMNIGNYKFTAIILGCSLNYAAYFAEIYRSGIESILVGQYEAAQLLGYNKSQTFFKIV 135 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTYQPLII 191 LPQ + +++E I+++K TS+ +++ E+F A++I + TT P +I Sbjct: 136 LPQVVKIVLPSVTNEVITLVKDTSLVYSVSYIEMFALAKQIAAAQTTVIPFVI 188 >gi|121610492|ref|YP_998299.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121555132|gb|ABM59281.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 219 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 118/204 (57%), Gaps = 6/204 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++W +I + Q L +T+ + ++ ++++ G +A++R+ ++ ++ + Sbjct: 1 MTFDWS--VIWTHRQALLEGAALTIALTVLTMLLAVPGGIVLALMRLS-ANRLLQRMSLC 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V FR PL++ ++ FY +P G+ +++L LN SAY +E R+ I SI K Sbjct: 58 FVEFFRNLPLILVIYWAFYVMPMATGLQMSPLATALVALVLNISAYNAETFRAGINSIRK 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVP-LSSEFISILKSTSVASTITIPEIFQTA 178 GQ +A+ A+G++R Q +R +++PQ T +P ++S ++++ K TS+ S I + E+ +A Sbjct: 118 GQLEAALAMGMSRHQALRKVVIPQA-TRRILPVIASTWVALFKDTSLVSVIAVGELAYSA 176 Query: 179 QRIVSTTYQPLIIYCELAFVYLIL 202 +I + T++ L + +A +Y ++ Sbjct: 177 MQIRAQTFRVLELLTAMAAIYWLM 200 >gi|171320895|ref|ZP_02909892.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171093838|gb|EDT38972.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 231 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/193 (30%), Positives = 102/193 (52%), Gaps = 29/193 (15%) Query: 32 FVISLIIGFFIAVIRIFFS---DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF 88 VIS + GF +A+ F + I+ + + + RGTPLLVQ+++I+YG +G +F Sbjct: 24 LVISAVFGFGLAIAIAFARLSPNPFIARMSKGFTEVIRGTPLLVQIYLIYYG---VGSLF 80 Query: 89 ----------------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 D F + +L ++ AY+ E++R+ + +PKG+ +A+ A+G+ Sbjct: 81 VGWPALRDSVFWPFLRDGFWYVAFALVISVGAYVGEVLRAGLRGVPKGEIEAARAMGMRP 140 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS---TTYQPL 189 R + LP+ I L+ E + +LKST++AST+ + ++ A I + TY+PL Sbjct: 141 SMIARRVSLPRAIQILLPTLAGETVMLLKSTALASTVAVMDVLGAANYIRAQTLRTYEPL 200 Query: 190 ----IIYCELAFV 198 +IY LAFV Sbjct: 201 LAIAVIYVALAFV 213 >gi|227511852|ref|ZP_03941901.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227084942|gb|EEI20254.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] Length = 253 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 73/237 (30%), Positives = 127/237 (53%), Gaps = 28/237 (11%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYV 62 F+ +IDS P+L + +P+ V+S+I+GF +A I + ++S I V Sbjct: 3 FHFMIDSLPKL-----ISVIPMTIYISVVSVIVGFALAAIIAIAREKKIKVLSQIFAVLV 57 Query: 63 WIFRGTPLLVQLFVIFYGLPH---------IGIVFDSFVAIIISLT---LNFSAYISEII 110 RGTP+LVQL+VI+YGLP + + S ++I+++ LN +A +SE I Sbjct: 58 SFVRGTPILVQLYVIYYGLPQFLYYLQNQGVNVKPGSLPHLVIAISAYSLNAAANLSETI 117 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 RS+ S+ K Q+ A+ ++G+T ++R I++PQ I S+ F+ ++K T++ I Sbjct: 118 RSAYHSVDKDQYQAALSVGMTPSLSMRRIVIPQLIPNLIPNFSNFFLDLIKDTALVYNIG 177 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKI----ESSVTQHTYS 223 I EI + I S ++ L Y + +YL++ C++ KI E+ VT+ +S Sbjct: 178 IIEIMAKSNIIASFGFKYLETYLDALLLYLVI---CFVFG-KILSLTETYVTRRVFS 230 >gi|253690632|ref|YP_003019822.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251757210|gb|ACT15286.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 247 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 109/194 (56%), Gaps = 29/194 (14%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGTPLLVQ 73 L+ ++TL I+ + +S ++GF +A R D+ ++S ++ Y +FR TPLLVQ Sbjct: 21 LWHGFLITLGISLSTIALSTVLGFLLAAAR----DSQVRVLSSVVVAYSSLFRNTPLLVQ 76 Query: 74 LFVIFYGL--------------PHI----GIVFD----SFVAIIISLTLNFSAYISEIIR 111 LF ++G PH+ G+ F+A + LTL SA+I+E IR Sbjct: 77 LFFWYFGAGQLFPSEMMQWLNTPHVISLLGMTLAWPSFEFLAGLAGLTLYSSAFIAEEIR 136 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + I + +GQ A++A+GLT Q++R+++LPQ + + PL ++++I+K++S+ I + Sbjct: 137 AGIRGVARGQKYAAHALGLTGWQSMRYVVLPQALKIALPPLLGQYMNIVKNSSLTMAIGV 196 Query: 172 PEIFQTAQRIVSTT 185 E+ ++++ + T Sbjct: 197 AELSYASRQVETET 210 >gi|293378561|ref|ZP_06624724.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] gi|292642890|gb|EFF61037.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] Length = 159 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/144 (34%), Positives = 84/144 (58%), Gaps = 1/144 (0%) Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F+ FYGLP IGIVFD F A +I+ LN++AY +EI R I SIP+GQ++A+ + L+ Q Sbjct: 14 FLFFYGLPTIGIVFDRFEAALIAFILNYAAYFAEIFRGGIQSIPQGQYEAAQVLQLSPFQ 73 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 T+ I++PQ + +E I+++K +S+ + + ++ + A +I L+ Sbjct: 74 TVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYILGLGDVMR-AGKIAMERDATLLPLLG 132 Query: 195 LAFVYLILTSFCYIIQIKIESSVT 218 +A +YL LT I+ ++E + Sbjct: 133 VAIIYLTLTGILTIVMKQVEGKLN 156 >gi|238752606|ref|ZP_04614079.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia rohdei ATCC 43380] gi|238709197|gb|EEQ01442.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia rohdei ATCC 43380] Length = 246 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 116/214 (54%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++A VT+ ++ ++VI+ +IG ++R + I+S I YV +FR PL+VQ F Sbjct: 25 IWAGFQVTVALSLCAWVIAFLIGSLFGILRTV-PNRILSGIGACYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F S F++ +I L L +A + E +R+ I S+P+GQ Sbjct: 84 WYLVVPELLPVDIGMWFKSELDPNIQFFLSSMICLGLFTAARVCEQVRAGIQSLPRGQKA 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 204 YSAHAYESFTAITLGYVLINAVIMLLMRLVEKKV 237 >gi|237653225|ref|YP_002889539.1| polar amino acid ABC transporter inner membrane subunit [Thauera sp. MZ1T] gi|237624472|gb|ACR01162.1| polar amino acid ABC transporter, inner membrane subunit [Thauera sp. MZ1T] Length = 230 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 111/210 (52%), Gaps = 15/210 (7%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMHFYVWIF 65 + +I+ P LL A VTL +A +S +++L G A ++ S + + L Y + Sbjct: 2 DALIEYSPSLL-AGAWVTLKVALMSVLLALATGLIGAACKL--SGFLPLRLWTMLYTTVM 58 Query: 66 RGTPLLVQLFVIFYG--------LPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSI 114 RG P LV + ++FYG + + G F D FVA ++++ L F AY +E R + Sbjct: 59 RGVPDLVMMLLVFYGGQLLLNAVIDYFGWDFIEIDPFVAGVLTIGLIFGAYFTETFRGAF 118 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +++ GQ +A A G++ Q R I+ PQ + + + + ++ +LKST++ S I + ++ Sbjct: 119 LAVSAGQLEAGRAYGMSALQVFRRILFPQMLRFALPGIGNNWLVLLKSTAIVSMIGLSDM 178 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 + A + +T+QP Y + +YL +T+ Sbjct: 179 TRIADQAGRSTHQPFTFYLAVCVLYLAMTA 208 >gi|315644843|ref|ZP_07897972.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus vortex V453] gi|315279785|gb|EFU43086.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus vortex V453] Length = 219 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 114/198 (57%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 FN++++ + Q + A + T+ + + SL++G IA++RI I+ I YV Sbjct: 6 FNILVEHWDQFM-AGLGQTILASLFGLIGSLVLGTLIAILRIA-PFRILKAIGAIYVEFI 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R PLLV +F F GLP +G+ D F + + L + +A+I+E IR+ I ++P GQ +A+ Sbjct: 64 RNIPLLVVVFFFFLGLPALGVPVDPFTSGTLGLMVYTAAFIAEAIRAGIQAVPSGQTEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 + GL+ Q +R+IILPQ + + ++ I+++K++SV I ++ A I +T Sbjct: 124 RSSGLSYVQNMRYIILPQAVKIVLPAIGNQLINLVKNSSVLGVIAGLDLMYYADLINLST 183 Query: 186 YQPLIIYCELAFVYLILT 203 ++ + +Y +A YL+LT Sbjct: 184 FKGIPVYTFVALFYLLLT 201 >gi|227113890|ref|ZP_03827546.1| binding-protein-dependent transport system inner membrane component [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 247 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 107/194 (55%), Gaps = 29/194 (14%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQ 73 L+ ++TL I+ + V+S ++GF +A R D+ I ++ Y +FR TPLLVQ Sbjct: 21 LWHGFLITLGISLSTIVLSTVLGFLLAAAR----DSQIRVLRGVVVAYSSLFRNTPLLVQ 76 Query: 74 LFVIFYGL--------------PH----IGIVFD----SFVAIIISLTLNFSAYISEIIR 111 LF ++G PH +G F+A + LTL SA+I+E IR Sbjct: 77 LFFWYFGAGQLFPSAMMQWLNTPHALSLLGTTLAWPSFEFLAGLAGLTLYSSAFIAEEIR 136 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S + + +GQ A++A+GLT Q++R+++LPQ + + PL ++++I+K++S+ I + Sbjct: 137 SGVRGVARGQKYAAHALGLTGWQSMRYVVLPQALKIALPPLLGQYMNIVKNSSLTMAIGV 196 Query: 172 PEIFQTAQRIVSTT 185 E+ ++++ + T Sbjct: 197 AELSYASRQVETET 210 >gi|332530477|ref|ZP_08406418.1| amino acid ABC transporter permease [Hylemonella gracilis ATCC 19624] gi|332040046|gb|EGI76431.1| amino acid ABC transporter permease [Hylemonella gracilis ATCC 19624] Length = 213 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 113/213 (53%), Gaps = 11/213 (5%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMHFYVWIFRGTPLL 71 ++L+A VT + ++ + ++IG +A++R I D +++ + F R TPL+ Sbjct: 7 RMLFAGAWVTAWTSGLAIAMGVVIGLGLALLRMARIPLLDPLLAAWISFA----RATPLV 62 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 + IF P +G+ + +A +++LT+N SA+ +E+ RS+ + Q +A+ A G+T Sbjct: 63 TLVLFIFLASPKLGLSLNREIAAVLALTINTSAFNAEVWRSAFRGFSREQLEAALACGMT 122 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 R Q R I+LPQ TS L +E ++K + + I + ++ + RI + TY+PL Sbjct: 123 RLQAFRRIMLPQMAVTSMPGLINEMTFLVKGSPAIAVIGMVDLTRVTNRIAAVTYEPLPP 182 Query: 192 YCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 A +Y+ L + + +K++ ++ + + Sbjct: 183 ILAAAVLYMALIA----LMVKLQGMAQRNAHRL 211 >gi|317491047|ref|ZP_07949483.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920594|gb|EFV41917.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 254 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 93/170 (54%), Gaps = 31/170 (18%) Query: 61 YVWIFRGTPLLVQLFVIFYGL------PHIGIV-----------------FDSFVAIIIS 97 YV FRGTPL VQ+ V+ + L P G++ + +F++ I++ Sbjct: 69 YVSAFRGTPLFVQIMVVHFALVPLLINPRDGVLVTSGLMSADFARMLRSDYGAFLSCIVA 128 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 +TLN AY+SEI R+ I SI GQ +AS A+G++ +T+R +ILPQ PL + I Sbjct: 129 ITLNAGAYVSEIFRAGIQSIDHGQMEASRALGMSWGKTMRKVILPQAFRRILPPLGNNAI 188 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTY----QPLIIYCELAFVYLILT 203 +I+K +S+AS I + ++ A R VS Y +P Y ++ +Y +LT Sbjct: 189 AIVKDSSLASAIGLADL-AYAARTVSGAYATYWEP---YLTISVIYWMLT 234 >gi|116629193|ref|YP_814365.1| ABC-type amino acid transport system, permease component [Lactobacillus gasseri ATCC 33323] gi|282851028|ref|ZP_06260402.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] gi|300362121|ref|ZP_07058298.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] gi|311111029|ref|ZP_07712426.1| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus gasseri MV-22] gi|116094775|gb|ABJ59927.1| amino acid ABC transporter membrane protein 1, PAAT family [Lactobacillus gasseri ATCC 33323] gi|282557980|gb|EFB63568.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] gi|300354740|gb|EFJ70611.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] gi|311066183|gb|EFQ46523.1| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus gasseri MV-22] Length = 212 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 99/180 (55%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + I+ SLI+G A++ + + + H Y+ IFR PLLV + + +P Sbjct: 19 TILCSLIALFFSLILGVGFALLEVA-PNKFGRAVAHVYIEIFRNIPLLVITMIFYLVVPQ 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 I F A I LTL SA+I+E +R+ I S+ GQ + + + G+T Q +R++ILPQ Sbjct: 78 IWFKVSGFAAGTIGLTLYTSAFIAETVRAGINSVGDGQMEGARSNGMTYTQAMRYVILPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + PL ++FI+++K++SV + + ++ A I ++++ + Y + YLILT Sbjct: 138 ALKIVIPPLGNQFINLIKNSSVLAFVAGFDLMYQADVIAFSSFETINTYVVVGLFYLILT 197 >gi|319778836|ref|YP_004129749.1| Histidine ABC transporter, permease protein HisM [Taylorella equigenitalis MCE9] gi|317108860|gb|ADU91606.1| Histidine ABC transporter, permease protein HisM [Taylorella equigenitalis MCE9] Length = 243 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 105/196 (53%), Gaps = 11/196 (5%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 Y+ + +TL +S ++ I+ ++++R+ + I + + ++FRGTPL +QL +I Sbjct: 26 YSGLAITLWTLSLSIFLAFILALPLSLMRVS-KNPFIRGPIWVFTYVFRGTPLYIQLLLI 84 Query: 78 FYGLPHIGIV----------FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + G + V F F +I++ TLN AY EI I S P G+ +A A Sbjct: 85 YSGFISLEFVKNTPVLHNFFFSGFNCVILAFTLNTLAYTIEIFAGYIKSTPSGEIEAGRA 144 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G+++ Q + IILP + + S+E I +L ST++A T T+P+I + A+ ++ TY Sbjct: 145 YGMSKPQIYKRIILPSALRRALPAYSNEVILMLHSTTIAFTATVPDILKVARDAMNDTYL 204 Query: 188 PLIIYCELAFVYLILT 203 + Y A +Y++++ Sbjct: 205 TMASYTVAAVIYMVMS 220 >gi|300172349|ref|YP_003771514.1| L-cystine permease [Leuconostoc gasicomitatum LMG 18811] gi|299886727|emb|CBL90695.1| L-cystine permease protein [Leuconostoc gasicomitatum LMG 18811] Length = 248 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 120/204 (58%), Gaps = 9/204 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +LI FP +L +A+ VTL + +S +I +I+G IA +++ + + I + R Sbjct: 8 HLIWQYFPDVL-SALPVTLLLTLVSTIIGVIVGAGIAYVKME-NTPFLKQIAAVFTSFIR 65 Query: 67 GTPLLVQLFVIFYGLP----HIGIVFDSFVAII---ISLTLNFSAYISEIIRSSIISIPK 119 GTP+L+Q+F+++YGLP ++GI D A++ I+ LN +A++SEIIR+++ S+P Sbjct: 66 GTPILIQMFLVYYGLPFFLGYVGIDADDVNALVYLFITYGLNMAAFLSEIIRAALESVPA 125 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q +A+ G T++Q II PQ + + ++ IS+L+ TS+A TI + ++ A+ Sbjct: 126 TQREAALTSGYTKRQMYFKIIFPQAVIIAMPSFATMVISLLQDTSLAFTIGVIDVVGKAK 185 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 + + T+ + Y +++IL+ Sbjct: 186 ALGTATFHTVEAYISAMIIFVILS 209 >gi|219855154|ref|YP_002472276.1| hypothetical protein CKR_1811 [Clostridium kluyveri NBRC 12016] gi|219568878|dbj|BAH06862.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 230 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/229 (29%), Positives = 120/229 (52%), Gaps = 19/229 (8%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I P +L A + +TL I S VI+L++G + ++ + ++ I Y+ RGT Sbjct: 1 MISKMPIILNA-LPITLEILFFSVVIALVVGMILTYAKVG-KNKVVRCIASIYISFMRGT 58 Query: 69 PLLVQLFVIFYGLPHIGIVFDSF----------VAIIISLTLNFSAYISEIIRSSIISIP 118 P++VQL + F G+P ++ DSF + II+ +LN +A+ +EI RS+ + I Sbjct: 59 PMIVQLLLAFIGIP---LILDSFGISTANWNNIIYAIIAFSLNEAAFFAEIFRSAYLDID 115 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF-ISILKSTSVASTITIPEIFQT 177 KGQ +A +IG+T+ QT R II Q + A+P ++ I ++K+TS+ I + ++ Sbjct: 116 KGQIEAGQSIGMTKFQTFRRIIFVQ-VAAKALPNTTNMIIELMKNTSLGIAIGVTDLMGM 174 Query: 178 AQRIVSTTY--QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 A++I Y + AF+Y I+ I+ I + + ++ V Sbjct: 175 AKQISYNNYGVGQTETFIVAAFIYWIMGLILTIVSSNITARLNRYNNPV 223 >gi|167769494|ref|ZP_02441547.1| hypothetical protein ANACOL_00828 [Anaerotruncus colihominis DSM 17241] gi|167668462|gb|EDS12592.1| hypothetical protein ANACOL_00828 [Anaerotruncus colihominis DSM 17241] Length = 205 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 102/180 (56%), Gaps = 2/180 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + IS + + ++G + +I S ++ I Y+ I RG P++V F I++G+ Sbjct: 5 TVKVTVISLIFATVLGLISCLFQISHSR-VLKFISQAYIDIMRGVPVMVLAFFIYFGVTR 63 Query: 84 -IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + + + +A I++L+LN AY+SEI RS I ++ GQ +A+ ++GL + +R +ILP Sbjct: 64 ALDVRMSAEIAGILTLSLNAGAYLSEIFRSGIQAVNIGQMEAARSLGLPYGRAMRKVILP 123 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + + ++FI LK TS+ I +PE+ Q I++ ++ I+ +A +Y ++ Sbjct: 124 QAVRIVIPSMVNQFIITLKDTSILYAIGMPELTQAGSLIIARNFRSFEIWATVAAMYFVI 183 >gi|227510040|ref|ZP_03940089.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227512970|ref|ZP_03943019.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227083727|gb|EEI19039.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227190419|gb|EEI70486.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 716 Score = 90.9 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 103/190 (54%), Gaps = 2/190 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + T+ + +S + I G + ++ + + + +++FRG PLLV Sbjct: 514 LLSGLKETMWLTVVSIFFATIFGIVVGLMGVV-PGKFFNWLSSILIYLFRGMPLLVLALF 572 Query: 77 IFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+ G+P + G +FVA +++LT N AYI+ ++ I ++ GQ +A+ ++GL ++ Sbjct: 573 IYTGIPSLTGEKIPAFVAGVVTLTFNEGAYIAAFVKGGIQAVDPGQMEAARSLGLPFGKS 632 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R +ILPQ I ++FI LK TS+ S I + E+ QT + I++ + ++ + Sbjct: 633 MRKVILPQGIRIMIPSFINQFIITLKDTSILSIIGLLELTQTGKIIIARNLEGFKVWTIV 692 Query: 196 AFVYLILTSF 205 A +YLI+ + Sbjct: 693 ALMYLIIITL 702 >gi|291618214|ref|YP_003520956.1| HisQ [Pantoea ananatis LMG 20103] gi|291153244|gb|ADD77828.1| HisQ [Pantoea ananatis LMG 20103] Length = 228 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 105/206 (50%), Gaps = 12/206 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + ++ +VTL +A S ++++I+G A ++ + ++SLI Y + RG P L Sbjct: 4 GYSDVILKGTLVTLELALSSVLLAVILGLIGAGAKLS-RNRLLSLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G+ D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNHLTDALGLTQFDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A G T Q R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 QIEAATAFGFTGSQVFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFC 206 +T+QP +YL+ T+ Sbjct: 183 AGKSTWQPFYFAIVAGVIYLVFTTLS 208 >gi|315502594|ref|YP_004081481.1| polar amino acid abc transporter, inner membrane subunit [Micromonospora sp. L5] gi|315409213|gb|ADU07330.1| polar amino acid ABC transporter, inner membrane subunit [Micromonospora sp. L5] Length = 291 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 3/179 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII-SLIMHFYV 62 +W + + L + TL +A ++ V++L+ G F A R+ SD ++ F V Sbjct: 51 KWEQFQYAAVQRELLNGLWATLKVAAVATVLALLFGAFFASARL--SDKVLFRAPATFVV 108 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +FR PLL+ +F +Y G D F A++I LTL + ++EI R+ I ++P GQ Sbjct: 109 ELFRAIPLLILIFFGYYVPLQYGWPIDKFWALVIGLTLYNGSVLAEIFRAGINAVPYGQS 168 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 + +YAIG+ + Q +R I+LPQ + + S+ + +LK T++ IT PE+ ++I Sbjct: 169 EGAYAIGMRKNQVLRLILLPQAFRSMLPAIVSQLVVLLKDTALGFIITYPELLFVGKQI 227 >gi|87122517|ref|ZP_01078396.1| Amino acid ABC transporter, permease protein, 3-TM region,His/Glu/Gln/Arg/opine [Marinomonas sp. MED121] gi|86162159|gb|EAQ63445.1| Amino acid ABC transporter, permease protein, 3-TM region,His/Glu/Gln/Arg/opine [Marinomonas sp. MED121] Length = 229 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/159 (33%), Positives = 87/159 (54%), Gaps = 12/159 (7%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYG----LPHIGIVFD--------SFVAIIISLTLNFSA 104 I + Y I RG P L+ + +I++G L + +F F A + +L L F A Sbjct: 50 IANGYTTIIRGIPELLTVLIIYFGATTVLMAVAGLFGYEDYIEIGPFAAGVTALGLTFGA 109 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 Y +E+ R ++ SIPKGQ +A+ A+G+ R +T IILPQ + L + F+ +LK T+ Sbjct: 110 YATEVFRGALQSIPKGQNEAAVALGMGRVRTFYRIILPQVWRMALPGLGNLFLVLLKDTA 169 Query: 165 VASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + S + + +I + A VS+T +P + Y A +YL LT Sbjct: 170 LVSVVGLDDIMRKANIAVSSTKEPFLFYSAAAVLYLGLT 208 >gi|317491411|ref|ZP_07949847.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920958|gb|EFV42281.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 222 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 98/172 (56%), Gaps = 12/172 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNF 102 +++ ++ Y+ +F GTPLLVQ+F+I+YG ++ ++ +++L LN Sbjct: 43 VLTQLVQGYITLFTGTPLLVQIFLIYYGPGQFDWIKQTPWLWNMLSQPWLCAMVALALNS 102 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +++ ++ +IP GQW + A+G++R QT+R I+LP + S+E + I KS Sbjct: 103 AAYTTQLFYGAVKAIPSGQWQSCEALGMSRSQTLR-ILLPFAFKRALSSYSNEVVLIFKS 161 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+A TIT+ E+ +Q++ TY ++++ +YL + +I +E Sbjct: 162 TSLAYTITLMEVMGYSQQMYGRTYD-VMVFGAAGVIYLCVNGLLTLIMRMVE 212 >gi|311280449|ref|YP_003942680.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] gi|308749644|gb|ADO49396.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] Length = 246 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 116/214 (54%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++ +++I+ I+G ++R + SL YV +FR PL+VQ F Sbjct: 25 LWSGFQVTVALSITAWIIAFIVGSLFGILRTVPHRALSSL-GTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P +IG F S FV+ ++ L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVIPELLPENIGTWFKSELDPNIQFFVSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 204 YSAHAWESFTAITLAYVLINAVIMLVMNLVERKV 237 >gi|26248696|ref|NP_754736.1| histidine transport system permease hisQ [Escherichia coli CFT073] gi|74312825|ref|YP_311244.1| histidine transport system permease [Shigella sonnei Ss046] gi|82777719|ref|YP_404068.1| histidine transport system permease protein [Shigella dysenteriae Sd197] gi|91211604|ref|YP_541590.1| histidine transport system permease hisQ [Escherichia coli UTI89] gi|117624498|ref|YP_853411.1| histidine transport system permease protein HisQ [Escherichia coli APEC O1] gi|157158838|ref|YP_001463652.1| histidine ABC transporter, permease protein HisQ [Escherichia coli E24377A] gi|157161795|ref|YP_001459113.1| histidine ABC transporter, permease protein HisQ [Escherichia coli HS] gi|170019383|ref|YP_001724337.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|170680291|ref|YP_001744508.1| histidine ABC transporter permease HisQ [Escherichia coli SMS-3-5] gi|188495755|ref|ZP_03003025.1| histidine ABC transporter, permease protein HisQ [Escherichia coli 53638] gi|191169477|ref|ZP_03031211.1| histidine ABC transporter, permease protein HisQ [Escherichia coli B7A] gi|193062411|ref|ZP_03043506.1| histidine ABC transporter, permease protein HisQ [Escherichia coli E22] gi|193068273|ref|ZP_03049237.1| histidine ABC transporter, permease protein HisQ [Escherichia coli E110019] gi|194429462|ref|ZP_03061985.1| histidine ABC transporter, permease protein HisQ [Escherichia coli B171] gi|209919808|ref|YP_002293892.1| histidine ABC transporter permease [Escherichia coli SE11] gi|215487521|ref|YP_002329952.1| histidine/lysine/arginine/ornithine transporter subunit HisQ, membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|218554864|ref|YP_002387777.1| histidine/lysine/arginine/ornithine ABC transporter membrane protein [Escherichia coli IAI1] gi|218559221|ref|YP_002392134.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|218690468|ref|YP_002398680.1| histidine/lysine/arginine/ornithine ABC transporter membrane protein [Escherichia coli ED1a] gi|218695907|ref|YP_002403574.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|218700784|ref|YP_002408413.1| histidine/lysine/arginine/ornithine ABC transporter membrane protein [Escherichia coli IAI39] gi|218705838|ref|YP_002413357.1| histidine/lysine/arginine/ornithine ABC transporter membrane protein [Escherichia coli UMN026] gi|227887366|ref|ZP_04005171.1| histidine ABC superfamily ATP binding cassette transporter, permease protein HisQ [Escherichia coli 83972] gi|237704785|ref|ZP_04535266.1| histidine transport system permease hisQ [Escherichia sp. 3_2_53FAA] gi|256017534|ref|ZP_05431399.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily protein [Shigella sp. D9] gi|260856352|ref|YP_003230243.1| histidine/lysine/arginine/ornithine transporter subunit HisQ [Escherichia coli O26:H11 str. 11368] gi|260869030|ref|YP_003235432.1| histidine/lysine/arginine/ornithine transporter subunit HisQ [Escherichia coli O111:H- str. 11128] gi|291283549|ref|YP_003500367.1| ABC-type arginine transport system permease [Escherichia coli O55:H7 str. CB9615] gi|293405774|ref|ZP_06649766.1| histidine ABC transporter [Escherichia coli FVEC1412] gi|293410665|ref|ZP_06654241.1| histidine ABC transporter [Escherichia coli B354] gi|293415600|ref|ZP_06658243.1| histidine transport system permease [Escherichia coli B185] gi|293446645|ref|ZP_06663067.1| histidine transport system permease [Escherichia coli B088] gi|298381457|ref|ZP_06991056.1| histidine ABC transporter [Escherichia coli FVEC1302] gi|300818089|ref|ZP_07098301.1| arginine/ornithine transport protein [Escherichia coli MS 107-1] gi|300822182|ref|ZP_07102324.1| arginine/ornithine transport protein [Escherichia coli MS 119-7] gi|300896990|ref|ZP_07115469.1| arginine/ornithine transport protein [Escherichia coli MS 198-1] gi|300903698|ref|ZP_07121613.1| arginine/ornithine transport protein [Escherichia coli MS 84-1] gi|300918520|ref|ZP_07135113.1| arginine/ornithine transport protein [Escherichia coli MS 115-1] gi|300924577|ref|ZP_07140539.1| arginine/ornithine transport protein [Escherichia coli MS 182-1] gi|300936886|ref|ZP_07151773.1| arginine/ornithine transport protein [Escherichia coli MS 21-1] gi|300983441|ref|ZP_07176590.1| arginine/ornithine transport protein [Escherichia coli MS 45-1] gi|301024139|ref|ZP_07187849.1| arginine/ornithine transport protein [Escherichia coli MS 69-1] gi|301049066|ref|ZP_07196050.1| arginine/ornithine transport protein [Escherichia coli MS 185-1] gi|301303230|ref|ZP_07209355.1| arginine/ornithine transport protein [Escherichia coli MS 124-1] gi|301328809|ref|ZP_07221854.1| arginine/ornithine transport protein [Escherichia coli MS 78-1] gi|307311131|ref|ZP_07590775.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|309784982|ref|ZP_07679615.1| histidine transport system permease protein hisQ [Shigella dysenteriae 1617] gi|309793191|ref|ZP_07687619.1| arginine/ornithine transport protein [Escherichia coli MS 145-7] gi|312967608|ref|ZP_07781823.1| histidine transport system permease protein hisQ [Escherichia coli 2362-75] gi|312973432|ref|ZP_07787604.1| histidine transport system permease protein hisQ [Escherichia coli 1827-70] gi|331663824|ref|ZP_08364734.1| histidine transport system permease protein HisQ [Escherichia coli TA143] gi|331669007|ref|ZP_08369855.1| histidine transport system permease protein HisQ [Escherichia coli TA271] gi|331673811|ref|ZP_08374574.1| histidine transport system permease protein HisQ [Escherichia coli TA280] gi|331678254|ref|ZP_08378929.1| histidine transport system permease protein HisQ [Escherichia coli H591] gi|332278542|ref|ZP_08390955.1| histidine/lysine/arginine/ornithine transporter subunit [Shigella sp. D9] gi|26109101|gb|AAN81304.1|AE016763_263 Histidine transport system permease protein hisQ [Escherichia coli CFT073] gi|73856302|gb|AAZ89009.1| histidine transport system permease protein [Shigella sonnei Ss046] gi|81241867|gb|ABB62577.1| histidine transport system permease protein [Shigella dysenteriae Sd197] gi|91073178|gb|ABE08059.1| histidine transport system permease protein hisQ [Escherichia coli UTI89] gi|115513622|gb|ABJ01697.1| histidine transport system permease protein HisQ [Escherichia coli APEC O1] gi|157067475|gb|ABV06730.1| histidine ABC transporter, permease protein HisQ [Escherichia coli HS] gi|157080868|gb|ABV20576.1| histidine ABC transporter, permease protein HisQ [Escherichia coli E24377A] gi|169754311|gb|ACA77010.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|170518009|gb|ACB16187.1| histidine ABC transporter, permease protein HisQ [Escherichia coli SMS-3-5] gi|188490954|gb|EDU66057.1| histidine ABC transporter, permease protein HisQ [Escherichia coli 53638] gi|190900479|gb|EDV60294.1| histidine ABC transporter, permease protein HisQ [Escherichia coli B7A] gi|192932077|gb|EDV84676.1| histidine ABC transporter, permease protein HisQ [Escherichia coli E22] gi|192958552|gb|EDV88991.1| histidine ABC transporter, permease protein HisQ [Escherichia coli E110019] gi|194412523|gb|EDX28822.1| histidine ABC transporter, permease protein HisQ [Escherichia coli B171] gi|195183047|dbj|BAG66607.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli O111:H-] gi|209764894|gb|ACI80759.1| histidine transport system permease protein [Escherichia coli] gi|209913067|dbj|BAG78141.1| histidine ABC transporter permease component [Escherichia coli SE11] gi|215265593|emb|CAS09996.1| histidine/lysine/arginine/ornithine transporter subunit HisQ, membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|218352639|emb|CAU98420.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|218361632|emb|CAQ99226.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI1] gi|218365990|emb|CAR03734.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|218370770|emb|CAR18583.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI39] gi|218428032|emb|CAV17819.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily [Escherichia coli ED1a] gi|218432935|emb|CAR13829.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily [Escherichia coli UMN026] gi|222034064|emb|CAP76805.1| Histidine transport system permease protein hisQ [Escherichia coli LF82] gi|226901151|gb|EEH87410.1| histidine transport system permease hisQ [Escherichia sp. 3_2_53FAA] gi|227835716|gb|EEJ46182.1| histidine ABC superfamily ATP binding cassette transporter, permease protein HisQ [Escherichia coli 83972] gi|257755001|dbj|BAI26503.1| histidine/lysine/arginine/ornithine transporter subunit HisQ [Escherichia coli O26:H11 str. 11368] gi|257765386|dbj|BAI36881.1| histidine/lysine/arginine/ornithine transporter subunit HisQ [Escherichia coli O111:H- str. 11128] gi|284922296|emb|CBG35381.1| histidine ABC transporter, permease protein [Escherichia coli 042] gi|290763422|gb|ADD57383.1| ABC-type arginine transport system, permease component [Escherichia coli O55:H7 str. CB9615] gi|291323475|gb|EFE62903.1| histidine transport system permease [Escherichia coli B088] gi|291427982|gb|EFF01009.1| histidine ABC transporter [Escherichia coli FVEC1412] gi|291433248|gb|EFF06227.1| histidine transport system permease [Escherichia coli B185] gi|291471133|gb|EFF13617.1| histidine ABC transporter [Escherichia coli B354] gi|294492902|gb|ADE91658.1| histidine ABC transporter, permease protein HisQ [Escherichia coli IHE3034] gi|298278899|gb|EFI20413.1| histidine ABC transporter [Escherichia coli FVEC1302] gi|300299113|gb|EFJ55498.1| arginine/ornithine transport protein [Escherichia coli MS 185-1] gi|300359171|gb|EFJ75041.1| arginine/ornithine transport protein [Escherichia coli MS 198-1] gi|300396683|gb|EFJ80221.1| arginine/ornithine transport protein [Escherichia coli MS 69-1] gi|300404280|gb|EFJ87818.1| arginine/ornithine transport protein [Escherichia coli MS 84-1] gi|300408529|gb|EFJ92067.1| arginine/ornithine transport protein [Escherichia coli MS 45-1] gi|300414334|gb|EFJ97644.1| arginine/ornithine transport protein [Escherichia coli MS 115-1] gi|300419208|gb|EFK02519.1| arginine/ornithine transport protein [Escherichia coli MS 182-1] gi|300457997|gb|EFK21490.1| arginine/ornithine transport protein [Escherichia coli MS 21-1] gi|300525312|gb|EFK46381.1| arginine/ornithine transport protein [Escherichia coli MS 119-7] gi|300529233|gb|EFK50295.1| arginine/ornithine transport protein [Escherichia coli MS 107-1] gi|300841404|gb|EFK69164.1| arginine/ornithine transport protein [Escherichia coli MS 124-1] gi|300844809|gb|EFK72569.1| arginine/ornithine transport protein [Escherichia coli MS 78-1] gi|306908637|gb|EFN39134.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|307554369|gb|ADN47144.1| histidine transport system permease protein HisQ [Escherichia coli ABU 83972] gi|307626155|gb|ADN70459.1| ABC-type arginine transport system permease [Escherichia coli UM146] gi|308123477|gb|EFO60739.1| arginine/ornithine transport protein [Escherichia coli MS 145-7] gi|308927352|gb|EFP72826.1| histidine transport system permease protein hisQ [Shigella dysenteriae 1617] gi|310332027|gb|EFP99262.1| histidine transport system permease protein hisQ [Escherichia coli 1827-70] gi|312287805|gb|EFR15710.1| histidine transport system permease protein hisQ [Escherichia coli 2362-75] gi|312946927|gb|ADR27754.1| histidine/lysine/arginine/ornithine transporter subunit HisQ [Escherichia coli O83:H1 str. NRG 857C] gi|315061601|gb|ADT75928.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli W] gi|315255245|gb|EFU35213.1| arginine/ornithine transport protein [Escherichia coli MS 85-1] gi|315292287|gb|EFU51639.1| arginine/ornithine transport protein [Escherichia coli MS 153-1] gi|320178717|gb|EFW53680.1| Histidine ABC transporter, permease protein HisQ [Shigella boydii ATCC 9905] gi|320199899|gb|EFW74488.1| Histidine ABC transporter, permease protein HisQ [Escherichia coli EC4100B] gi|320657373|gb|EFX25175.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663075|gb|EFX30392.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ [Escherichia coli O55:H7 str. USDA 5905] gi|323156459|gb|EFZ42614.1| histidine transport system permease protein hisQ [Escherichia coli EPECa14] gi|323161645|gb|EFZ47530.1| histidine transport system permease protein hisQ [Escherichia coli E128010] gi|323168520|gb|EFZ54200.1| histidine transport system permease protein hisQ [Shigella sonnei 53G] gi|323171991|gb|EFZ57635.1| histidine transport system permease protein hisQ [Escherichia coli LT-68] gi|323176766|gb|EFZ62356.1| histidine transport system permease protein hisQ [Escherichia coli 1180] gi|323187967|gb|EFZ73262.1| histidine transport system permease protein hisQ [Escherichia coli RN587/1] gi|323377818|gb|ADX50086.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli KO11] gi|323944821|gb|EGB40887.1| inner membrane transport system [Escherichia coli H120] gi|323952101|gb|EGB47975.1| inner membrane transport system [Escherichia coli H252] gi|323956074|gb|EGB51827.1| inner membrane transport system [Escherichia coli H263] gi|324020830|gb|EGB90049.1| arginine/ornithine transport protein [Escherichia coli MS 117-3] gi|324117814|gb|EGC11713.1| inner membrane transport system [Escherichia coli E1167] gi|331059623|gb|EGI31600.1| histidine transport system permease protein HisQ [Escherichia coli TA143] gi|331064201|gb|EGI36112.1| histidine transport system permease protein HisQ [Escherichia coli TA271] gi|331069084|gb|EGI40476.1| histidine transport system permease protein HisQ [Escherichia coli TA280] gi|331074714|gb|EGI46034.1| histidine transport system permease protein HisQ [Escherichia coli H591] gi|332088439|gb|EGI93557.1| histidine transport system permease protein hisQ [Shigella boydii 5216-82] gi|332100894|gb|EGJ04240.1| histidine/lysine/arginine/ornithine transporter subunit [Shigella sp. D9] Length = 228 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V+++IIG A ++ + + LI Y + RG P L Sbjct: 4 GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLS-QNRLSGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G TR Q R I+ P + + + + + ILKST++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +T++P +YL+ T+ Sbjct: 183 AGKSTWEPFYFAIVCGVIYLVFTT 206 >gi|307321920|ref|ZP_07601303.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Sinorhizobium meliloti AK83] gi|306892433|gb|EFN23236.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Sinorhizobium meliloti AK83] Length = 204 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 85/144 (59%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV +FRGT LLVQLFV+++ LP GI + V I+ L LN AY SEI+RS+I +I G Sbjct: 38 YVELFRGTSLLVQLFVLYFVLPIYGIRLPAEVTAILGLGLNQGAYGSEIVRSAIDNIGTG 97 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+ L R T IILPQ + + I +K+T++ S ITIPE+ + Sbjct: 98 QIEAARALSLPRIITFWKIILPQALIIMLPSFGNLAIETVKATALVSLITIPELTFFGKS 157 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 ++ +T Q +++ + YL + + Sbjct: 158 LIYSTGQTFLVWASVVIAYLAINT 181 >gi|15888715|ref|NP_354396.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] gi|15156457|gb|AAK87181.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] Length = 223 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 111/204 (54%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 MKY + F +++ +PQ+ I +TL + I V+ + +G F A +R + + Sbjct: 1 MKYTFDFGWLLEYYPQI-AKGIAITLELIAIGGVLGIALGIFCAWVRALGPKWLRPPVAT 59 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TP L+QLF IF+GLP +G+ A I++ +N AY EIIR+ I + PK Sbjct: 60 -YVELIRNTPFLIQLFFIFFGLPSLGLQLSELSAANIAMVVNLGAYSCEIIRAGIQATPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A ++ +TR +T RH++L ++ LSS+ + ++ +SV S I ++ A Sbjct: 119 GQFEAGASLAMTRFETFRHVVLVPSLQRIWPALSSQVVIVMLGSSVVSQIAAEDLTFAAN 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I S T++ Y +YL+L Sbjct: 179 FIQSRTFRAFEAYMVSTVIYLVLA 202 >gi|302188037|ref|ZP_07264710.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas syringae pv. syringae 642] Length = 218 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 108/200 (54%), Gaps = 7/200 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF---RGTPLLVQLFVIFYG 80 +L I ++ + + +G F+A+ +D+ I ++ F + I RG P+L+ L ++G Sbjct: 22 SLQICALALLWGVPVGLFLAI----GTDSKIKMLRIFSICIVELGRGAPVLILLQFFYFG 77 Query: 81 LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 LP++ + S A I++L + +AY SEIIR + ++P GQ +A+ +GL +R +I Sbjct: 78 LPNVHVSLSSAAASILALGWSTAAYTSEIIRGGLKAVPPGQREAAVTLGLAPATAMRIVI 137 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 +PQ + PL + +L++TS+ TI +PEI A I S T+Q + + +Y Sbjct: 138 VPQAMRICLPPLLGFALVMLQTTSLCFTIALPEIVSRANEIGSATFQYMSVLMLTGLMYA 197 Query: 201 ILTSFCYIIQIKIESSVTQH 220 + I+ ++E +++H Sbjct: 198 AVCIPATIVVSQMERRLSRH 217 >gi|296162981|ref|ZP_06845758.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295886775|gb|EFG66616.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 246 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/183 (34%), Positives = 102/183 (55%), Gaps = 13/183 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ ++VI+LI+G V+R + S I YV IFR PL+VQ F+ Sbjct: 26 LLSGFWVTITVSLSAWVIALIVGSLFGVLRTV-PNKWASGIGTLYVAIFRNIPLIVQFFI 84 Query: 77 IFYGLPH-----IGIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + +P +G F F + II L L +A + E +RS I ++P+GQ A Sbjct: 85 WYLVIPELLPVSVGNWFKQLPPGAQFFSSSIICLGLFTAARVCEQVRSGINALPRGQRAA 144 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 145 GLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDY 204 Query: 185 TYQ 187 T Q Sbjct: 205 TSQ 207 >gi|302866035|ref|YP_003834672.1| polar amino acid ABC transporter inner membrane subunit [Micromonospora aurantiaca ATCC 27029] gi|302568894|gb|ADL45096.1| polar amino acid ABC transporter, inner membrane subunit [Micromonospora aurantiaca ATCC 27029] Length = 291 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 3/179 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII-SLIMHFYV 62 +W + + L + TL +A ++ V++L+ G F A R+ SD ++ F V Sbjct: 51 KWEQFQYAAVQRELLNGLWATLKVAAVATVLALLFGAFFASARL--SDKVLFRAPATFVV 108 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +FR PLL+ +F +Y G D F A++I LTL + ++EI R+ I ++P GQ Sbjct: 109 ELFRAIPLLILIFFGYYVPLQYGWPIDKFWALVIGLTLYNGSVLAEIFRAGINAVPYGQS 168 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 + +YAIG+ + Q +R I+LPQ + + S+ + +LK T++ IT PE+ ++I Sbjct: 169 EGAYAIGMRKNQVLRLILLPQAFRSMLPAIVSQLVVLLKDTALGFIITYPELLFVGKQI 227 >gi|257440502|ref|ZP_05616257.1| glutamine ABC transporter, permease protein [Faecalibacterium prausnitzii A2-165] gi|257197124|gb|EEU95408.1| glutamine ABC transporter, permease protein [Faecalibacterium prausnitzii A2-165] Length = 254 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 20/215 (9%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSD----------TIISLIMHFYVWIFRGTP 69 + TL + I+ + +++G +A++R+ + + Y I RGTP Sbjct: 44 GVGTTLLVTAIALALGVVLGSVVALVRVAHDQQRPGRRNPVLGFFNAVCQVYTTIIRGTP 103 Query: 70 LLVQLF----VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 ++VQL VIF + +V ++L +N AY+SEIIR ++++ GQ +A Sbjct: 104 MMVQLLIMSMVIFSNSRNFTMVG------ALALGINSGAYVSEIIRGGLMAVDPGQMEAG 157 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++GL T+ I++PQ I L +EFI +LK TS+ + I E+ AQ I++ T Sbjct: 158 RSLGLNYMTTMVVIVIPQAIRAVLPALGNEFIVLLKDTSLITVIGGKELLYAAQGIMNRT 217 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y+ + +A VYLIL + K E + Q Sbjct: 218 YEAMFPLLGVAVVYLILVMLFTWLLSKFERRMAQG 252 >gi|302522779|ref|ZP_07275121.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. SPB78] gi|302431674|gb|EFL03490.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. SPB78] Length = 214 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 109/205 (53%), Gaps = 10/205 (4%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI--FRGTPLLVQLFVIFYGL 81 TL + + +++L +GF +A R+ + SL + W+ R TPL + F + GL Sbjct: 18 TLELTVYASLLALALGFVMASFRV---APVGSLRVFGTAWVTVLRNTPLTLLFFAVLLGL 74 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 P G+V + +++L SA+I E +RS I ++PKGQ +A+ ++G++ QT+ +IL Sbjct: 75 PRFGLVLPFQLFAVLALGCYTSAFICEALRSGINTVPKGQGEAARSLGMSFGQTLTAVIL 134 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ P+ S+ I++ K++++A ++ E+ T + + + + ++ +A YLI Sbjct: 135 PQAFRAVIPPVGSQLIALAKNSAIAGAFSVTELLGTYKTLNELGFNIVWVFVWIAVGYLI 194 Query: 202 LTSFCYIIQIKIESSVTQHTYSVDK 226 LT + I + +H + V + Sbjct: 195 LT-----LAISALFNYLEHRWGVPR 214 >gi|28871279|ref|NP_793898.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28854529|gb|AAO57593.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 237 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 109/206 (52%), Gaps = 12/206 (5%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + F LL +T+ +A +S +S+++G A ++ S ++ + Y + RG P Sbjct: 11 LKGFGPLLLEGTWMTIKLAVLSLALSILLGLVGASAKLS-SSALLRVPAQIYTTLIRGIP 69 Query: 70 LLVQLFVIFYGLPH-IGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIP 118 LV + +IFY L + ++ D+ F A +ISL + AY +E R +I+S+P Sbjct: 70 DLVLMLLIFYSLQTWLTMLTDAMEWEYIEINPFGAGVISLGFIYGAYFTETFRGAILSVP 129 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+ A GL R Q R+++ PQ + + + + + +LK+T++ S I + ++ + + Sbjct: 130 RGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALVSIIGLADLVKAS 189 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTS 204 Q +TYQ A +YL++TS Sbjct: 190 QDAGKSTYQLFYFLVLAALIYLMITS 215 >gi|24113680|ref|NP_708190.1| histidine transport system permease protein [Shigella flexneri 2a str. 301] gi|30063734|ref|NP_837905.1| histidine transport system permease protein [Shigella flexneri 2a str. 2457T] gi|110806271|ref|YP_689791.1| histidine transport system permease [Shigella flexneri 5 str. 8401] gi|331658391|ref|ZP_08359353.1| histidine transport system permease protein HisQ [Escherichia coli TA206] gi|24052746|gb|AAN43897.1| histidine transport system permease protein [Shigella flexneri 2a str. 301] gi|30041989|gb|AAP17715.1| histidine transport system permease protein [Shigella flexneri 2a str. 2457T] gi|110615819|gb|ABF04486.1| histidine transport system permease protein [Shigella flexneri 5 str. 8401] gi|281601749|gb|ADA74733.1| Histidine transport system permease protein [Shigella flexneri 2002017] gi|313651132|gb|EFS15531.1| histidine transport system permease protein hisQ [Shigella flexneri 2a str. 2457T] gi|315298159|gb|EFU57423.1| arginine/ornithine transport protein [Escherichia coli MS 16-3] gi|331056639|gb|EGI28648.1| histidine transport system permease protein HisQ [Escherichia coli TA206] gi|332754958|gb|EGJ85323.1| histidine transport system permease protein hisQ [Shigella flexneri 4343-70] gi|332755358|gb|EGJ85722.1| histidine transport system permease protein hisQ [Shigella flexneri K-671] gi|332756472|gb|EGJ86823.1| histidine transport system permease protein hisQ [Shigella flexneri 2747-71] gi|332766128|gb|EGJ96338.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella flexneri 2930-71] gi|333001975|gb|EGK21541.1| histidine transport system permease protein hisQ [Shigella flexneri K-218] gi|333002677|gb|EGK22237.1| histidine transport system permease protein hisQ [Shigella flexneri K-272] gi|333016441|gb|EGK35772.1| histidine transport system permease protein hisQ [Shigella flexneri K-304] gi|333016561|gb|EGK35891.1| histidine transport system permease protein hisQ [Shigella flexneri K-227] Length = 228 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V+++IIG A ++ + + LI Y + RG P L Sbjct: 4 GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLS-QNRLSGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNMVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G TR Q R I+ P + + + + + ILKST++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +T++P +YL+ T+ Sbjct: 183 AGKSTWEPFYFAIVCGVIYLVFTT 206 >gi|260844895|ref|YP_003222673.1| histidine/lysine/arginine/ornithine transporter subunit HisQ [Escherichia coli O103:H2 str. 12009] gi|257760042|dbj|BAI31539.1| histidine/lysine/arginine/ornithine transporter subunit HisQ [Escherichia coli O103:H2 str. 12009] Length = 228 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V+++IIG A ++ + + LI Y + RG P L Sbjct: 4 GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLS-QNRLSGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G TR Q R I+ P + + + + + ILKST++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +T++P +YL+ T+ Sbjct: 183 AGKSTWEPFYFAIVCGVIYLVFTT 206 >gi|331647963|ref|ZP_08349055.1| histidine transport system permease protein HisQ [Escherichia coli M605] gi|281179394|dbj|BAI55724.1| histidine ABC transporter permease component [Escherichia coli SE15] gi|330912131|gb|EGH40641.1| histidine ABC transporter, permease protein HisQ [Escherichia coli AA86] gi|331043687|gb|EGI15825.1| histidine transport system permease protein HisQ [Escherichia coli M605] Length = 228 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V+++IIG A ++ + + LI Y + RG P L Sbjct: 4 GFSSVILQGALVTLELAISSVVLAVIIGLIGAGGKLS-QNRLSGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G TR Q R I+ P + + + + + ILKST++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +T++P +YL+ T+ Sbjct: 183 AGKSTWEPFYFAIVCGVIYLVFTT 206 >gi|152987622|ref|YP_001349398.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150962780|gb|ABR84805.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 248 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/175 (33%), Positives = 101/175 (57%), Gaps = 15/175 (8%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A + T+ I+ + ++I+L +G + V+R + ++S I YV +FR PLLVQLF+ + Sbjct: 27 AGLGWTIAISLVGWIIALALGSLLGVMRTV-PNRLVSGIATAYVELFRNVPLLVQLFIWY 85 Query: 79 YGLPHI---GI----------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 + +P + G+ ++++++I L L +A + E +R+ I ++P GQ A+ Sbjct: 86 FLVPDLLPEGLQTWFKQDLNPTTSAYLSVVICLGLFTAARVCEQVRTGIQALPYGQTSAA 145 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 A+G Q RH++LPQ PL+SEF++I K++SVAS I + E+ QT Q Sbjct: 146 RAMGFRLPQIYRHVLLPQAFRIIIPPLTSEFLNIFKNSSVASLIGLMELLAQTKQ 200 >gi|47568092|ref|ZP_00238797.1| amino acid ABC transporter, permease protein [Bacillus cereus G9241] gi|47555246|gb|EAL13592.1| amino acid ABC transporter, permease protein [Bacillus cereus G9241] Length = 177 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/138 (34%), Positives = 85/138 (61%) Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R PL++ F+ ++ LP IGI + FVA ++LT+ +A+I+E+IR+ I+S+ KGQ +A+ Sbjct: 21 RNIPLVLIAFIFYFALPVIGITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAA 80 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 + GLT Q + +I+LPQ + PL ++F++++K++S+ I ++ I + T Sbjct: 81 RSSGLTYVQGMYYIVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGMDLMYQGDLISTKT 140 Query: 186 YQPLIIYCELAFVYLILT 203 + +Y + YLILT Sbjct: 141 FVTFDVYIFVGMFYLILT 158 >gi|16264163|ref|NP_436955.1| putative amino acid ABC transporter permease protein [Sinorhizobium meliloti 1021] gi|307299986|ref|ZP_07579771.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Sinorhizobium meliloti BL225C] gi|307316661|ref|ZP_07596104.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Sinorhizobium meliloti AK83] gi|15140288|emb|CAC48815.1| EhuC [Sinorhizobium meliloti 1021] gi|306897859|gb|EFN28602.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Sinorhizobium meliloti AK83] gi|306904875|gb|EFN35458.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Sinorhizobium meliloti BL225C] Length = 219 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 51/164 (31%), Positives = 89/164 (54%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ FRGT + VQLF +++ LP GI A +++L LN AY +E++R ++ +I + Sbjct: 54 YIEFFRGTSIFVQLFWVYFVLPFAGITLTPLQAGVLALGLNVGAYGAEVVRGAVKAIGRE 113 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A+ LTR Q +RHI+LPQ + + I +LK T+V S I++ ++ AQ Sbjct: 114 QREACIALNLTRFQAMRHIVLPQALPLMLPTFGNNAIELLKGTAVVSLISLSDMTFQAQV 173 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 + + T LI + + +Y ++ + +E V++ V Sbjct: 174 VRAQTGSTLIPFATILLLYFVMAWLISLGMRWLERRVSRGLDGV 217 >gi|330877359|gb|EGH11508.1| amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 248 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 99/170 (58%), Gaps = 15/170 (8%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ IA +++VI+LI+G + V+R S ++S I YV IFR PLLVQLF+ ++ +P Sbjct: 32 TIAIAVVAWVIALILGSVLGVMRTVPSR-LVSGIATAYVEIFRNVPLLVQLFIWYFLVPD 90 Query: 84 I-------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + +F+++++ L L +A + E +R+ I ++PKGQ A+ A+G Sbjct: 91 LLPADLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGF 150 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 Q +++LPQ PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 151 KLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|237745209|ref|ZP_04575690.1| conserved hypothetical protein [Fusobacterium sp. 7_1] gi|229432438|gb|EEO42650.1| conserved hypothetical protein [Fusobacterium sp. 7_1] Length = 219 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/140 (35%), Positives = 86/140 (61%), Gaps = 5/140 (3%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 FF I+ Y+ + R TPLLVQLF +++GLP +G+ F + II LT +Y+ Sbjct: 48 FFKQIIVG-----YIELSRNTPLLVQLFFLYFGLPKVGLRFSPEICGIIGLTFLGGSYMI 102 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E RS++ +I K Q +++ ++G+T+ QT+R++ILPQ+ S L++ I +LK TSV S Sbjct: 103 ETFRSALETIDKIQKESALSLGMTKWQTMRYVILPQSFVISLPGLTANIIFLLKETSVFS 162 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I++ ++ A+ ++ Y+ Sbjct: 163 AISLMDMMFVAKDLIGLYYK 182 >gi|288905750|ref|YP_003430972.1| amino acid ABC transporter permease [Streptococcus gallolyticus UCN34] gi|306831848|ref|ZP_07465004.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978783|ref|YP_004288499.1| putative glutamine transport system permease [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732476|emb|CBI14048.1| Putative amino acid ABC transporter, permease protein [Streptococcus gallolyticus UCN34] gi|304426046|gb|EFM29162.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178711|emb|CBZ48755.1| putative glutamine transport system permease protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 234 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 100/176 (56%), Gaps = 6/176 (3%) Query: 33 VISLIIGFFIAVIRIFFS---DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP---HIGI 86 + +LI+ F + VI S + ++ I YV +F+ TPLLVQ ++YGL + I Sbjct: 38 ICALILAFVLGVIFGAMSSSKNRVLKAIARVYVEVFQNTPLLVQFVFVYYGLAIMTNGVI 97 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 + +F ++ + + AYI+E+IRS I ++PKGQ +A+ + G T QT+ IILPQ + Sbjct: 98 MISTFFTAVLCVGIYHGAYIAEVIRSGIEAVPKGQTEAALSQGFTYSQTMSLIILPQAVR 157 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 T PL+++ ++++K+TS + I+ +I TA+ T + + A +Y I+ Sbjct: 158 TILPPLTNQVVNLIKNTSTVAIISGADIMFTAKAWAYETTNYVPAFAGAALLYFIM 213 >gi|298488719|ref|ZP_07006748.1| glutamate/aspartate transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156792|gb|EFH97883.1| glutamate/aspartate transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 248 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 99/170 (58%), Gaps = 15/170 (8%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ IA ++++I+LI+G + V+R S ++S I YV IFR PLLVQLF+ ++ +P Sbjct: 32 TIAIAVVAWIIALILGSVLGVMRTVPSR-LVSGIATVYVEIFRNVPLLVQLFIWYFLVPD 90 Query: 84 I-------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + +F+++++ L L +A + E +R+ I ++PKGQ A+ A+G Sbjct: 91 LLPENLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGF 150 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 Q +++LPQ PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 151 KLPQIYWNVLLPQAYRLIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|238854964|ref|ZP_04645294.1| glutamine ABC transporter permease component [Lactobacillus jensenii 269-3] gi|260664249|ref|ZP_05865102.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus jensenii SJ-7A-US] gi|282931675|ref|ZP_06337168.1| putative glutamine transport system permease protein GlnP [Lactobacillus jensenii 208-1] gi|313472444|ref|ZP_07812936.1| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus jensenii 1153] gi|238832754|gb|EEQ25061.1| glutamine ABC transporter permease component [Lactobacillus jensenii 269-3] gi|239530141|gb|EEQ69142.1| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus jensenii 1153] gi|260562135|gb|EEX28104.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus jensenii SJ-7A-US] gi|281304286|gb|EFA96395.1| putative glutamine transport system permease protein GlnP [Lactobacillus jensenii 208-1] Length = 212 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 108/203 (53%), Gaps = 10/203 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++ W NL+ + VT+ I+ IS SL++G A++ + + T+ +I H Sbjct: 5 LQNNWSNLL---------SGFGVTVMISIISLCASLVLGTVFAIMEVVPNKTV-QIIAHS 54 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ +FR PLLV + + +P F A I L+L SA+I+E IR+ I S+ +G Sbjct: 55 YIELFRNIPLLVITMIFYLIVPQYLFKISGFTAGCIGLSLYTSAFIAECIRAGINSVGEG 114 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q + + + G+T Q +R +ILPQ + L ++FI+++K++SV + + ++ Sbjct: 115 QMEGARSNGMTYVQAMRFVILPQAFKVAIPSLGNQFINLIKNSSVLAFVAGFDLMYQGDV 174 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I +++Q + Y + YL+LT Sbjct: 175 IAFSSFQTVNTYLVVGCCYLVLT 197 >gi|229817170|ref|ZP_04447452.1| hypothetical protein BIFANG_02429 [Bifidobacterium angulatum DSM 20098] gi|229784959|gb|EEP21073.1| hypothetical protein BIFANG_02429 [Bifidobacterium angulatum DSM 20098] Length = 224 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 99/170 (58%), Gaps = 4/170 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I+ I +++L++G A + + + I+ Y+ I R TPLLVQL+ +F+GLP Sbjct: 26 MTLFISIIGIILALVVGLICAGVELA-RVPVARQIVRVYIEISRNTPLLVQLYFLFFGLP 84 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 +GIV+ + I+ L +Y++E +R+ + ++P+ Q + +Y +G T Q++ ++LP Sbjct: 85 KLGIVWSAETCAIVGLGFLGGSYMAEAMRAGLQAVPEVQRETAYVLGFTPMQSLTRVVLP 144 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS---TTYQPL 189 Q ++ + + + I + K +SV S I + ++ A+ ++ +TY+ L Sbjct: 145 QAVSGAIPGIVANVIFLFKESSVVSAIALADVMYMAKDLIGMYYSTYESL 194 >gi|298529734|ref|ZP_07017137.1| polar amino acid ABC transporter, inner membrane subunit [Desulfonatronospira thiodismutans ASO3-1] gi|298511170|gb|EFI35073.1| polar amino acid ABC transporter, inner membrane subunit [Desulfonatronospira thiodismutans ASO3-1] Length = 231 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 114/223 (51%), Gaps = 13/223 (5%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + + LL +TL + S V+++ +G I V+ F +++ Y + RG P Sbjct: 6 LHGYGWLLLQGAKLTLYVGLCSMVLAMGLGL-IGVLCKFSRSSLVRFAADTYTTVIRGIP 64 Query: 70 LLVQLFVIFYGLPHI--------G----IVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 L+ + +++YG+P + G I FD FVA + ++ + A+ +E+ R + +++ Sbjct: 65 ELILILLVYYGVPTLIQDVSAKFGQPVYISFDPFVAGVATIGFIYGAFSTEVFRGAYLAV 124 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P+GQ +A+ A G++ T R ++LPQ + + L + ++ ++K+T++ S I +PE+ + Sbjct: 125 PRGQVEAARACGMSPALTFRRVVLPQMMRFALPGLGNVWMVLIKATALISVIQLPELMRN 184 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 A T +P + + +YL +T ++Q E ++ Sbjct: 185 ADIAARATREPFTFFFAASLIYLFITIGSNLVQQWAEKRASRG 227 >gi|171780124|ref|ZP_02921028.1| hypothetical protein STRINF_01912 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281472|gb|EDT46907.1| hypothetical protein STRINF_01912 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 234 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 100/176 (56%), Gaps = 6/176 (3%) Query: 33 VISLIIGFFIAVIRIFFS---DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP---HIGI 86 + +LI+ F + VI S + ++ I YV +F+ TPLLVQ ++YGL + I Sbjct: 38 ICALILAFVLGVIFGAMSSSKNRVLKAIARVYVEVFQNTPLLVQFVFVYYGLAIMTNGVI 97 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 + +F ++ + + AYI+E+IRS I ++PKGQ +A+ + G T QT+ IILPQ + Sbjct: 98 MISTFFTAVLCVGIYHGAYIAEVIRSGIEAVPKGQTEAALSQGFTYSQTMSLIILPQAVR 157 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 T PL+++ ++++K+TS + I+ +I TA+ T + + A +Y I+ Sbjct: 158 TILPPLTNQVVNLIKNTSTVAIISGADIMFTAKAWAYETTNYVPAFAGAALLYFIM 213 >gi|290893634|ref|ZP_06556616.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071] gi|290556836|gb|EFD90368.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071] Length = 235 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 112/218 (51%), Gaps = 18/218 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 A++ T+P+ ++ GF IA+ IR++ + I FYV FR TP ++ + Sbjct: 14 AMLKTIPLTLAMTFFPILFGFIIAIGLTLIRMYHVR-FLEPIAKFYVSFFRSTPAILHIM 72 Query: 76 VIFYGLP----------HIGIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +I+ G+P +GI + V +II+L+ AY++EI+RS I+++ GQ Sbjct: 73 LIYLGIPLLVDFLSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIMAVDIGQM 132 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+Y++G T Q IR ++LPQ + ++ I L +TS+A+ + +PEI A + Sbjct: 133 EAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVA 192 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S Y L + A +Y LT I +E ++ ++ Sbjct: 193 SDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKY 230 >gi|226224892|ref|YP_002758999.1| amino acid ABC transporter (permease) [Listeria monocytogenes Clip81459] gi|225877354|emb|CAS06068.1| Putative amino acid ABC transporter (permease) [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 235 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 112/218 (51%), Gaps = 18/218 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 A++ T+P+ ++ GF IA+ IR++ + I FYV FR TP ++ + Sbjct: 14 AMLKTIPLTLAMTFFPILFGFIIAIGMTLIRMYHVR-FLEPIAKFYVSFFRSTPAILHIM 72 Query: 76 VIFYGLP----------HIGIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +I+ G+P +GI + + +II+L+ AY++EI+RS II++ GQ Sbjct: 73 LIYLGIPLLVDFLSKSFGLGISANKIPVVIFVIIALSFTAGAYLTEILRSGIIAVDIGQM 132 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+Y++G T Q IR ++LPQ + ++ I L +TS+A+ + +PEI A + Sbjct: 133 EAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVA 192 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S Y L + A +Y LT I +E ++ ++ Sbjct: 193 SDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKY 230 >gi|259909118|ref|YP_002649474.1| Glutamate/aspartate transport system permease [Erwinia pyrifoliae Ep1/96] gi|224964740|emb|CAX56257.1| Glutamate/aspartate transport system permease [Erwinia pyrifoliae Ep1/96] gi|283479146|emb|CAY75062.1| putative glutamate/aspartate ABC transport system, inner membrane component [Erwinia pyrifoliae DSM 12163] Length = 245 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 115/214 (53%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++ +++I+L +G F ++R ++S + YV +FR PL+VQ F+ Sbjct: 25 LWSGFQVTIAVSVCAWIIALFVGSFFGILRTV-PGRLLSSLGTCYVELFRNVPLIVQFFI 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F S F ++ L L +A + E +R++I S+P GQ + Sbjct: 84 WYLVVPELLPEDIGMWFKSEIDPNIQFFTCSVLCLGLFTAARVCEQVRAAIQSLPSGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+ + + ++ +E V Sbjct: 204 YSAHAYESFTAITLAYIAINTVIMLLMGLVERKV 237 >gi|191170156|ref|ZP_03031710.1| histidine ABC transporter, permease protein HisQ [Escherichia coli F11] gi|306814580|ref|ZP_07448742.1| ABC-type arginine transport system permease [Escherichia coli NC101] gi|190909672|gb|EDV69257.1| histidine ABC transporter, permease protein HisQ [Escherichia coli F11] gi|305851974|gb|EFM52426.1| ABC-type arginine transport system permease [Escherichia coli NC101] gi|324006682|gb|EGB75901.1| arginine/ornithine transport protein [Escherichia coli MS 57-2] gi|324013190|gb|EGB82409.1| arginine/ornithine transport protein [Escherichia coli MS 60-1] Length = 228 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V+++IIG A ++ + + LI Y + RG P L Sbjct: 4 GFSGVILQGALVTLELAISSVVLAVIIGLIGASGKLS-QNRLSGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G TR Q R I+ P + + + + + ILKST++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +T++P +YL+ T+ Sbjct: 183 AGKSTWEPFYFAIVCGVIYLVFTT 206 >gi|300725185|ref|YP_003714513.1| putative glutamate/aspartate ABC transporter membrane protein [Xenorhabdus nematophila ATCC 19061] gi|297631730|emb|CBJ92449.1| putative glutamate/aspartate transport protein (ABC superfamily, membrane) [Xenorhabdus nematophila ATCC 19061] Length = 245 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 109/204 (53%), Gaps = 29/204 (14%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS---LIMHFYVW 63 +L+ + Q L+ ++TL ++ + V S ++GF IA R D+ I ++ Y Sbjct: 9 HLLAPEYLQWLWQGFLLTLWLSACAIVSSTLLGFVIAAAR----DSQIKPLRWLVTIYTT 64 Query: 64 IFRGTPLLVQLF--------------VIFYGLPHIGIVFD--------SFVAIIISLTLN 101 +FR TPLLVQLF +++ PH + F+A I LTL Sbjct: 65 VFRNTPLLVQLFFWYFASGQTLPQEAMMWLNTPHEATILGLTLAWPSFEFLAGFIGLTLY 124 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 + +++E +R+ I + +GQ A++A+GLT Q++RH++LPQ + + PL ++++I+K Sbjct: 125 SAPFVAEELRAGIQGVGRGQKYAAHALGLTGWQSMRHVVLPQALKIAMPPLLGQYMNIVK 184 Query: 162 STSVASTITIPEIFQTAQRIVSTT 185 ++S+ I + E+ ++++ + T Sbjct: 185 NSSLTMAIGVAELSYASRQVETET 208 >gi|292488872|ref|YP_003531759.1| histidine ABC transporter inner membrane protein [Erwinia amylovora CFBP1430] gi|292900017|ref|YP_003539386.1| histidine ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291199865|emb|CBJ46989.1| histidine ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291554306|emb|CBA21657.1| Histidine ABC transport system, inner membrane component [Erwinia amylovora CFBP1430] Length = 228 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 12/218 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + ++++ +VTL +A S V ++++G A ++ S + ++ Y + RG P L Sbjct: 4 GYSEVIFKGALVTLELALSSVVFAVLLGLIGAAAKLSNSRPLAAM-SEVYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----HIGIVF-------DSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL + F D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNQLTDFFSFAQFDIDPMVAGIITLGFIYGAYFTETFRGAWMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A G TR QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 QLEAATAFGFTRSQTFRRILFPAMMRFALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 +T+QP +YLI T+ + +E T Sbjct: 183 AGKSTWQPFWFAIVAGVIYLIFTTLSNGVLWWLERRYT 220 >gi|302550658|ref|ZP_07303000.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces viridochromogenes DSM 40736] gi|302468276|gb|EFL31369.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces viridochromogenes DSM 40736] Length = 300 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 65/231 (28%), Positives = 118/231 (51%), Gaps = 20/231 (8%) Query: 3 YEWFNLIIDSFPQLLYAA-IVVTLPIACISFVISLIIGFFIAVIR-----IFFSDTIISL 56 ++W ++FP++L + V L + C + V L++G IA+ R +FF + Sbjct: 74 FDW-GYAREAFPKVLEGLWLNVRLLLVCGAAV--LVLGMLIAIARTLRGPVFFP---LRA 127 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + Y FRG PL++ L ++ G+P + G+ D + +LTL +SAY++E+ R+ Sbjct: 128 LAAAYTDFFRGLPLIINLMIVVLGVPALRLQGVTVDPVLLGGTALTLTYSAYVAEVFRAG 187 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I S+ Q A+ ++GL+ +Q +R+++LPQ + PL ++ +S+ K T + S + Sbjct: 188 IESVHPSQRAAARSLGLSNRQALRYVVLPQAVRRQVPPLLNDLVSLQKDTGLVSIGGAVD 247 Query: 174 IFQTAQRIV--STTYQPLIIYCELAFVYLI--LTSFCYIIQIKIESSVTQH 220 + A IV S Y P I+ L FV L +T F + +++ Q Sbjct: 248 AVRAADIIVGRSLNYTPYIV-AGLVFVALTIPMTRFTDWVTARMDRRRAQG 297 >gi|152971504|ref|YP_001336613.1| glutamine ABC transporter ATP-binding component [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|330013161|ref|ZP_08307582.1| ABC transporter, ATP-binding protein [Klebsiella sp. MS 92-3] gi|150956353|gb|ABR78383.1| glutamine ABC transporter ATP-binding component [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|328533587|gb|EGF60305.1| ABC transporter, ATP-binding protein [Klebsiella sp. MS 92-3] Length = 506 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 112/195 (57%), Gaps = 15/195 (7%) Query: 1 MKYEW---FNLI-IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 M ++W F+L I +F + A V + I+ +S+ I L++GF +A ++ + + + Sbjct: 1 MAFDWGYFFSLFSIGAF----WQACVTVIVISTLSWGIGLVVGFLLACAKLS-APRWVKI 55 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIR 111 + Y+W FR PL+V L V Y LP + ++ F+A ++S+T+ +AY++EI R Sbjct: 56 PVELYIWFFRSVPLMV-LLVFVYNLPQLFPVTQPLLGVPFIAGLVSMTVTEAAYMAEIHR 114 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++S+ KGQ +A +A+ + R I++PQ S L +E+I+I+K +S+ S +++ Sbjct: 115 GGLLSVAKGQSEAGHALSFSFIGIQRLIVIPQAFRISLPTLINEYITIIKLSSILSVVSL 174 Query: 172 PEIFQTAQRIVSTTY 186 PE+ T QR+ + + Sbjct: 175 PELLLTGQRLYAQNF 189 >gi|328477583|gb|EGF47645.1| ABC transporter glutamine-binding periplasmic protein [Lactobacillus rhamnosus MTCC 5462] Length = 486 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/160 (36%), Positives = 92/160 (57%), Gaps = 5/160 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +++IFRG PLLV I+ G+P IG +FVA II+LTLN AY + ++ I ++ Sbjct: 327 FIYIFRGLPLLVLALFIYTGVPSLIGSKIPAFVAGIITLTLNEGAYTAAFVKGGIQAVDV 386 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ ++GL + +R +ILPQ I ++FI LK TS+ S I I E+ QT + Sbjct: 387 GQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGILELTQTGK 446 Query: 180 RIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIES 215 I++ + I+ +A +YLI LT +Q ++E+ Sbjct: 447 IIIARNMEGFKIWTMVALIYLIIITVLTWLSNWVQQRMEA 486 >gi|325273127|ref|ZP_08139424.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] gi|324101732|gb|EGB99281.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] Length = 230 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 11/155 (7%) Query: 60 FYVWIFRGTPLLVQLFVIFYG-----------LPHIGIVFDSFVAIIISLTLNFSAYISE 108 FY + RG P L+ + +I++G L G+ +F A +I+L L F AY +E Sbjct: 54 FYSTLVRGVPELLWVLLIYFGTVGLMNTLGEALNMPGLELSAFAAGVIALGLCFGAYATE 113 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 + R +I++IPKG +A A+GL++ + + IILPQ + L + F+ ++K T++ S Sbjct: 114 VFRGAILAIPKGHREAGLALGLSKGRILSRIILPQMWRIALPGLGNLFMILMKDTALVSV 173 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I + EI + AQ V+ T P Y A +YL LT Sbjct: 174 IGLEEIMRHAQIGVTVTKAPFTFYMVAACIYLSLT 208 >gi|307130487|ref|YP_003882503.1| amino acid ABC transporter permease [Dickeya dadantii 3937] gi|306528016|gb|ADM97946.1| amino acid ABC transporter permease [Dickeya dadantii 3937] Length = 256 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/217 (26%), Positives = 116/217 (53%), Gaps = 7/217 (3%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF-- 65 L++ +P ++ TL I+ ++ V+S +G + + R+ L W++ Sbjct: 15 LLMGQYPNGPLGGVLCTLLISLLAVVLSFPLGVLVGLARL---SPWRGLRWAATAWVYTL 71 Query: 66 RGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RG PL++ +F ++ +P IG F ++ +L + SAYI+EI+R I ++P GQ++A Sbjct: 72 RGIPLMMVVFWTYFCVPLLIGQNISGFSTMLCTLVIYESAYIAEIVRGGIQALPHGQYEA 131 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 S A+G++ +T+R ++LPQ + S L S+ +SI+K +++ I +PE+ A ++ + Sbjct: 132 SRALGMSYLKTLRLVVLPQALFNSLPSLVSQLVSIIKDSTLGYVINVPELTYAANQVSNQ 191 Query: 185 TY-QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +P ++ +A Y I+ + K+ES + Sbjct: 192 LLTKPFQVFAIVALSYYIICFSLTWLANKLESYIANK 228 >gi|217963555|ref|YP_002349233.1| L-cystine transport system permease TcyM [Listeria monocytogenes HCC23] gi|217332825|gb|ACK38619.1| L-cystine transport system permease protein TcyM [Listeria monocytogenes HCC23] gi|307571869|emb|CAR85048.1| polar amino acid ABC transporter, permease protein [Listeria monocytogenes L99] Length = 236 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 112/218 (51%), Gaps = 18/218 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 A++ T+P+ ++ GF IA+ IR++ + I FYV FR TP ++ + Sbjct: 15 AMLKTIPLTLAMTFFPILFGFIIAIGLTLIRMYHVR-FLEPIAKFYVSFFRSTPAILHIM 73 Query: 76 VIFYGLP----------HIGIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +I+ G+P +GI + V +II+L+ AY++EI+RS I+++ GQ Sbjct: 74 LIYLGIPLLVDFLSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIMAVDIGQM 133 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+Y++G T Q IR ++LPQ + ++ I L +TS+A+ + +PEI A + Sbjct: 134 EAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVA 193 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S Y L + A +Y LT I +E ++ ++ Sbjct: 194 SDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKY 231 >gi|169832815|ref|YP_001694169.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae Hungary19A-6] gi|168995317|gb|ACA35929.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae Hungary19A-6] Length = 206 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 1/176 (0%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 IA + S ++G +++IR + +++ + Y+ + R TPLL+QLF +++GLP IGI Sbjct: 3 IAVWGILGSFLLGLIVSIIR-HYRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGI 61 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 V S V + L +Y++E RS + +I + Q + AIGLT Q R+++LPQ Sbjct: 62 VLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAIGLTPLQVFRYVVLPQATA 121 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 S+ I ++K TSV S + + ++ A+ ++ Y+ I L YLI+ Sbjct: 122 VVLPSFSANVIFLIKKTSVFSAVALADLMYVAKDLIGLYYETDIALAMLVVAYLIM 177 >gi|46908517|ref|YP_014906.1| amino acid ABC transporter permease [Listeria monocytogenes serotype 4b str. F2365] gi|47092445|ref|ZP_00230235.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 4b H7858] gi|254825078|ref|ZP_05230079.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194] gi|254854299|ref|ZP_05243647.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503] gi|254933325|ref|ZP_05266684.1| amino acid ABC transporter [Listeria monocytogenes HPB2262] gi|300763905|ref|ZP_07073901.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL N1-017] gi|46881789|gb|AAT05083.1| amino acid ABC transporter, permease protein [Listeria monocytogenes serotype 4b str. F2365] gi|47019222|gb|EAL09965.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 4b H7858] gi|258607691|gb|EEW20299.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503] gi|293584886|gb|EFF96918.1| amino acid ABC transporter [Listeria monocytogenes HPB2262] gi|293594321|gb|EFG02082.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194] gi|300515246|gb|EFK42297.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL N1-017] gi|328465382|gb|EGF36629.1| amino acid ABC transporter, permease protein [Listeria monocytogenes 1816] gi|328471566|gb|EGF42446.1| amino acid ABC transporter, permease protein [Listeria monocytogenes 220] Length = 235 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 112/218 (51%), Gaps = 18/218 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 A++ T+P+ ++ GF IA+ IR++ + I FYV FR TP ++ + Sbjct: 14 AMLKTIPLTLAMTFFPILFGFIIAIGMTLIRMYHVR-FLEPIAKFYVSFFRSTPAILHIM 72 Query: 76 VIFYGLP----------HIGIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +I+ G+P +GI + + +II+L+ AY++EI+RS II++ GQ Sbjct: 73 LIYLGIPLLVDFLSKSFGLGISANKIPVVIFVIIALSFTAGAYLTEILRSGIIAVDIGQM 132 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+Y++G T Q IR ++LPQ + ++ I L +TS+A+ + +PEI A + Sbjct: 133 EAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVA 192 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S Y L + A +Y LT I +E ++ ++ Sbjct: 193 SDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKY 230 >gi|330944618|gb|EGH46568.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] Length = 164 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 89/151 (58%), Gaps = 4/151 (2%) Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 M Y+ +FR P+LV L++ F+GLP +G+ +F ++ L+L ++ + E++R + S Sbjct: 1 MRIYLELFRAIPVLVWLYLFFFGLPIFLGLSIPAFWCAVLVLSLWGASEVGEVVRGGLRS 60 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQ +A AIGL Q ++LPQ + P+ + + ++K++S+A I + ++ + Sbjct: 61 IPRGQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVVDVTK 120 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 Q+I+ TY+ ++IY F++L CY Sbjct: 121 VGQQIIERTYESVLIY---GFLFLFFFIVCY 148 >gi|225856390|ref|YP_002737901.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae P1031] gi|225724420|gb|ACO20272.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae P1031] Length = 206 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 1/176 (0%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 IA + S ++G +++IR + +++ + Y+ + R TPLL+QLF +++GLP IGI Sbjct: 3 IAVWGILGSFLLGLIVSIIR-HYRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPLIGI 61 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 V S V + L S+Y++E RS + +I + Q + AIGLT Q R+++LPQ Sbjct: 62 VLSSEVCATLGLVFLGSSYMAESFRSGLEAISQTQQEIGLAIGLTPLQVFRYVVLPQATA 121 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 S+ I ++K TSV S + + ++ A+ ++ Y+ I L YLI+ Sbjct: 122 VVLPSFSANVIFLIKKTSVFSAVALADLMYVAKDLIGLYYETDIALAMLVVAYLIM 177 >gi|224438000|ref|ZP_03658939.1| glutamine ABC transporter permease GlnP [Helicobacter cinaedi CCUG 18818] gi|313144446|ref|ZP_07806639.1| glutamine ABC transporter permease GlnP [Helicobacter cinaedi CCUG 18818] gi|313129477|gb|EFR47094.1| glutamine ABC transporter permease GlnP [Helicobacter cinaedi CCUG 18818] Length = 219 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 96/169 (56%), Gaps = 2/169 (1%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+ +TL I+ ++SL+IGF A I +F + +++ YV + R TPLL+QLF ++Y Sbjct: 17 ALSLTLYISFFGILLSLLIGFICAWI-LFLKVPFVRYLVNAYVEVARNTPLLIQLFFLYY 75 Query: 80 GLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 GL + GI +V I L Y+ E R+ + S+ K Q +++ +IGL+ Q +R+ Sbjct: 76 GLHGVMGISLSEYVCAITGLAFLGGGYMCESFRTGLESMSKSQIESAQSIGLSSFQMMRY 135 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +ILPQ++ + + + I +LK TSV I + ++ + I++ Y+ Sbjct: 136 VILPQSLGVALPSIGANVIFLLKETSVVGVIALADVMFVTKDIITNYYK 184 >gi|197251179|ref|YP_002146396.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197214882|gb|ACH52279.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 226 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 111/224 (49%), Gaps = 9/224 (4%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---DTIISLIMHFY 61 +FN + + P +V + C +I I GF +I F S ++ I Y Sbjct: 8 FFNDLTEQLP-----LVVDGIKETCKLALIVSITGFLWGIIIFFLSLSHRPVVKAITRLY 62 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + F GTPL++ LFVI+YGLP GI SF + TLN AY + + ++ ++ K + Sbjct: 63 MDFFIGTPLILILFVIYYGLPQSGIHLSSFTVAVTGFTLNVGAYNAAYMTTAYNALNKYE 122 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ GL ++Q IILPQ + +S L+++ I+ LK +++ I E F Q + Sbjct: 123 TEAAVVQGLNKRQVFLWIILPQVLLSSIPALTNQMINNLKDSTIVFLIQYTEFFARIQEV 182 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T+++ Y A VYLI +F + +E + +H Y D Sbjct: 183 AATSFKFFHAYLFAAIVYLIGVTFIVGLTRFLEHRLLRH-YGQD 225 >gi|160913600|ref|ZP_02076290.1| hypothetical protein EUBDOL_00076 [Eubacterium dolichum DSM 3991] gi|158434061|gb|EDP12350.1| hypothetical protein EUBDOL_00076 [Eubacterium dolichum DSM 3991] Length = 227 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 103/190 (54%), Gaps = 10/190 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 II + QL+ + I + L I+ I ++ IIG A +R I+ ++ Y+ IFRGT Sbjct: 15 IIAEYWQLIISGIPLILEISFICAMMGTIIGLSTAFLR--RKSKILEKVIAAYIDIFRGT 72 Query: 69 PLLVQLFVIFYGL----PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 P+ VQL YGL P + V FV +I +LN AY+SEIIR+ + I KGQ +A Sbjct: 73 PVYVQLVFFCYGLCSLFPSLNNV-SPFVWALIVFSLNSGAYLSEIIRAGVEGIDKGQIEA 131 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G++RK + I++P + +EFI++ K T+V I + ++ + + S Sbjct: 132 AKALGVSRKDIAKDIVVPLAFRNVLPAVVNEFITLTKETAVVGVIGLHDMMYYSDAVTSK 191 Query: 185 TY---QPLII 191 Y +PL++ Sbjct: 192 FYSFFEPLLV 201 >gi|332312770|gb|EGJ25865.1| L-cystine transport system permease protein tcyM [Listeria monocytogenes str. Scott A] Length = 236 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 112/218 (51%), Gaps = 18/218 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 A++ T+P+ ++ GF IA+ IR++ + I FYV FR TP ++ + Sbjct: 15 AMLKTIPLTLAMTFFPILFGFIIAIGMTLIRMYHVR-FLEPIAKFYVSFFRSTPAILHIM 73 Query: 76 VIFYGLP----------HIGIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +I+ G+P +GI + + +II+L+ AY++EI+RS II++ GQ Sbjct: 74 LIYLGIPLLVDFLSKSFGLGISANKIPVVIFVIIALSFTAGAYLTEILRSGIIAVDIGQM 133 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+Y++G T Q IR ++LPQ + ++ I L +TS+A+ + +PEI A + Sbjct: 134 EAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVA 193 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S Y L + A +Y LT I +E ++ ++ Sbjct: 194 SDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKY 231 >gi|307132040|ref|YP_003884056.1| cystine transport system permease [Dickeya dadantii 3937] gi|306529569|gb|ADM99499.1| Cystine transport system permease protein [Dickeya dadantii 3937] Length = 222 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 106/215 (49%), Gaps = 3/215 (1%) Query: 5 WFNLIIDSFPQL--LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 W N D QL + IV T +A I + + G I + I T+ +L Y+ Sbjct: 5 WNNFYHDLIEQLPLVLNGIVGTFKLAAIVSLSGFLWGIVIFFLSISSQPTVKNL-TKIYM 63 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 F GTPL++ LFVI+YGLP GI F + TLN AY + + ++ S+ K + Sbjct: 64 DFFIGTPLILILFVIYYGLPQTGIHLSPFTVAVSGFTLNVGAYNAAYMTTAYNSLSKHET 123 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ G + Q R IILPQ + TS L+++ I+ +K +++A I E F Q + Sbjct: 124 EAAVVQGFSSWQIFRLIILPQVLITSVPALTNQVINNVKDSTIAFLIQYTEFFSRIQEVA 183 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 ST ++ Y A VYL+ +F I+ IE + Sbjct: 184 STNFEFFNAYLFAALVYLVFITFIVILSRVIERKL 218 >gi|224826756|ref|ZP_03699856.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] gi|224600976|gb|EEG07159.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] Length = 247 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 100/170 (58%), Gaps = 15/170 (8%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ +A ++I+LI+G + V+R + T S I YV +FR PLLVQLFV ++ +P Sbjct: 32 TIAVALAGWIIALILGSVLGVMRTLPNKTA-SGIATAYVELFRNVPLLVQLFVWYFLVPD 90 Query: 84 I-----GIVFD--------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + I F +++++++ L L +A + E +R+ + ++PKGQ A+ A+G Sbjct: 91 LLPERAQIWFKQDLSPATSAYLSVVVCLGLFTAARVCEQVRTGVQALPKGQNYAAMAMGF 150 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 + Q R+++LPQ PL+SEF++I K++SVAS I + E+ QT Q Sbjct: 151 QQAQIYRYVLLPQAFRIIIPPLTSEFLNIFKNSSVASLIGLMELLAQTKQ 200 >gi|104784120|ref|YP_610618.1| amino acid ABC transporter permease [Pseudomonas entomophila L48] gi|95113107|emb|CAK17835.1| putative amino acid ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 230 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/154 (33%), Positives = 88/154 (57%), Gaps = 11/154 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIGIVFD-------SFVAIIISLTLNFSAYISEI 109 Y + RG P L+ + +I++G + +G +F+ +F A +I+L L F AY +E+ Sbjct: 55 YSTLVRGVPELLWVLLIYFGTVGLMNSLGALFNMPGLELSAFAAGVIALGLCFGAYATEV 114 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +I++IPKG +A A+GL++ + + IILPQ + L + F+ ++K T++ S I Sbjct: 115 FRGAILAIPKGHREAGLALGLSKGRILSRIILPQMWRIALPGLGNLFMILMKDTALVSVI 174 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + EI + AQ V+ T +P Y A +YL LT Sbjct: 175 GLEEIMRHAQIGVTVTKEPFTFYAVAACIYLGLT 208 >gi|194432871|ref|ZP_03065155.1| histidine ABC transporter, permease protein HisQ [Shigella dysenteriae 1012] gi|194418859|gb|EDX34944.1| histidine ABC transporter, permease protein HisQ [Shigella dysenteriae 1012] gi|332090124|gb|EGI95223.1| histidine transport system permease protein hisQ [Shigella dysenteriae 155-74] Length = 228 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V+++IIG A ++ + + LI Y + RG P L Sbjct: 4 GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLS-QNRLSGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G TR Q R I+ P + + + + + ILKST++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQV 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +T++P +YL+ T+ Sbjct: 183 AGKSTWEPFYFAIVCGVIYLVFTT 206 >gi|332284791|ref|YP_004416702.1| amino-acid ABC transporter permease y4tG [Pusillimonas sp. T7-7] gi|330428744|gb|AEC20078.1| amino-acid ABC transporter permease y4tG [Pusillimonas sp. T7-7] Length = 230 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 64/188 (34%), Positives = 103/188 (54%), Gaps = 1/188 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L +VVT+ + F ++ ++G +A ++ IIS R TPLLVQLF Sbjct: 22 ILLKGLVVTIQATVLGFAVAAVLGLVLAALK-SSRLRIISWPARLITEFIRDTPLLVQLF 80 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 ++Y LP GIV +F+ ++L + +SAY SE+ R+ I SI +GQ +A+ A+ L+ +T Sbjct: 81 FLYYVLPEYGIVLPAFLTGALALGIQYSAYTSEVYRAGIESITRGQTEAACALDLSPLRT 140 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 II+PQ I L + +SI+K V S +++ E+ A+ I T+ LI + Sbjct: 141 FSVIIVPQAIPRIIPALGNYLVSIMKDVPVLSVVSVLEMLNVAKIIGDRTFNYLIPLSMV 200 Query: 196 AFVYLILT 203 +YLILT Sbjct: 201 GGLYLILT 208 >gi|167033328|ref|YP_001668559.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166859816|gb|ABY98223.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 239 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 15/223 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 + Q L A +VT+ +A I L +G +A+ + F +FRG P Sbjct: 13 GGWGQALLAGALVTVSLALACLPIGLPLGLVVALAARSRKRLPRAWATTFST-VFRGLPE 71 Query: 71 LVQLFVIFYG--------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 L+ L +I+YG L +G + ++F+A +I+ +L F+A+ SEI ++ ++P Sbjct: 72 LLTLLIIYYGCQIAAQKILAAMGYEGEFLINTFLAAMIAFSLVFAAFSSEIWLAAFKTLP 131 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVP-LSSEFISILKSTSVASTITIPEIFQT 177 KGQ +A A+GL+++ ++LPQ +T A+P LS+ ++S+LK TS+ STI++ ++ + Sbjct: 132 KGQLEACSALGLSKRTGFFKVLLPQ-LTRIALPGLSNNWLSLLKDTSLVSTISLVDLMRQ 190 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 VS T +P+ Y YL+ + + IE +H Sbjct: 191 TNLAVSVTKEPMFFYGVACLGYLLFAALSGRVFAYIERRSNRH 233 >gi|42518677|ref|NP_964607.1| glutamine ABC transporter permease component [Lactobacillus johnsonii NCC 533] gi|41582963|gb|AAS08573.1| glutamine ABC transporter permease component [Lactobacillus johnsonii NCC 533] gi|329666942|gb|AEB92890.1| Glutamine transport system permease protein [Lactobacillus johnsonii DPC 6026] Length = 212 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 99/180 (55%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + I+ SLI+G A++ + + + H Y+ IFR PLLV + + +P Sbjct: 19 TILCSVIALFFSLILGVGFALLEVA-PNKFGRAVAHVYIEIFRNIPLLVITMIFYLVVPQ 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 I F A I LTL SA+I+E +R+ I S+ GQ + + + G+T Q +R++ILPQ Sbjct: 78 IWFKVSGFAAGTIGLTLYTSAFIAETVRAGINSVGDGQMEGARSNGMTYTQAMRYVILPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + PL ++FI+++K++SV + + ++ A I ++++ + Y + YL+LT Sbjct: 138 ALKIVIPPLGNQFINLIKNSSVLAFVAGFDLMYQADVIAFSSFETINTYVVVGLFYLVLT 197 >gi|289450156|ref|YP_003475673.1| ABC transporter ATP-binding protein [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184703|gb|ADC91128.1| ABC transporter, ATP-binding protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 580 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 20/198 (10%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-----------I 53 W II S + + I++TL ++ ++ I +IG + +++ + + + Sbjct: 12 WIIWIIRSSYRSILNGILLTLVVSLVATFIGCLIGLAVGLLQTWPESSREAWLKRGFKRL 71 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLP-----HIGIVFDSFVAIIISLTLNFSAYISE 108 + I+ YV IFRGTP++VQ I+YG H+ ++F A I +++N AY++E Sbjct: 72 LKFILKAYVEIFRGTPMMVQAAFIYYGAALLFNWHMNLIF----AAIFIVSINTGAYMAE 127 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 +R ++SI GQ + + A+GL +T+R IILPQ I + + I +K T V S Sbjct: 128 TVRGGVMSIDPGQTEGAKALGLNHYRTMRSIILPQAIRNIMPQIGNNLIINIKDTCVLSI 187 Query: 169 ITIPEIFQTAQRIVSTTY 186 I + E+F T + I TY Sbjct: 188 IGVMELFYTMKSISGATY 205 >gi|227875260|ref|ZP_03993402.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus mulieris ATCC 35243] gi|269978149|ref|ZP_06185099.1| probable amino-acid ABC transporter permease protein [Mobiluncus mulieris 28-1] gi|227844165|gb|EEJ54332.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus mulieris ATCC 35243] gi|269933658|gb|EEZ90242.1| probable amino-acid ABC transporter permease protein [Mobiluncus mulieris 28-1] Length = 217 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 101/172 (58%), Gaps = 5/172 (2%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDS---FVAIIISLTLNFSAYISEI 109 ++ ++ FY+ I RGTPL++QL V+++G ++ G+ + F A+II+ +N++AY +EI Sbjct: 46 LAWVVQFYISIMRGTPLMLQLMVVYFGPYYLFGVQISAEYRFYAVIIAFAINYAAYFAEI 105 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +IP GQ +A++ +G ++++T I +PQ T +++E I+++K TS+A I Sbjct: 106 YRGGFQAIPAGQSEAAFVLGYSQRRTFFTIKVPQMFRTVLPSITNEVITLVKDTSLAFAI 165 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + E+F A++ S T + + A Y + ++ ++E V+++ Sbjct: 166 SYTEMFTLAKQYASAT-ASMAPFVAAAVFYYVFNIVVAVLMDRLEKHVSKYA 216 >gi|222081929|ref|YP_002541294.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726608|gb|ACM29697.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 227 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 110/184 (59%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL ++ IS VI L++G A+ R + +I YV + R TPLLVQ+F++++ Sbjct: 20 GVWLTLQLSVISTVIGLVLGTLCAIGRADGGPWLRGIIAT-YVEVIRNTPLLVQVFLVYF 78 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G+ +G+ + +A +++L +N AY EI+R+ + SI K Q +A+ +GL+R+QT H+ Sbjct: 79 GIATLGVHVSANMAAVVALVVNVGAYTCEIVRAGLQSIHKAQLEAAECLGLSRRQTYWHV 138 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I+ I L+S+++ ++ ++S+ S I+ E+ A RI S T++ Y + +Y Sbjct: 139 IIRPAIERVYPALTSQYVLLMLASSITSQISAEELTAVANRIQSDTFRSFETYIVVGVLY 198 Query: 200 LILT 203 L+L+ Sbjct: 199 LLLS 202 >gi|163857806|ref|YP_001632104.1| amino acid ABC transporter, permease protein [Bordetella petrii DSM 12804] gi|163261534|emb|CAP43836.1| amino acid ABC transporter, permease protein [Bordetella petrii] Length = 230 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 11/190 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W I+ + + TL A IS S+ +G +A+ R+ I Y+ Sbjct: 8 YNWR--IVGQYAGQFADGLANTLLAAGISLACSVALGVPLALARMARRAPIWRPAAG-YI 64 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII---ISLTLNFSAYISEIIRSSIISIPK 119 R TPLLVQ+++++Y LP+ S+ +I ++LTL+ +AY+SEI+R I S+P+ Sbjct: 65 QFIRATPLLVQIYLVYYALPYFVPAAKSWSELILGIVALTLHHTAYMSEIVRVGIQSVPR 124 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE-----I 174 GQ + + A+G+ +Q +R+++LPQ + PL + ++K TS+ S I + E + Sbjct: 125 GQIEGAKAVGMDFRQRLRYVVLPQAFANTLPPLLGQTAVLIKDTSLLSLIAVFELVAAGV 184 Query: 175 FQTAQRIVST 184 ++RIV Sbjct: 185 LMNSERIVPN 194 >gi|148545554|ref|YP_001265656.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida F1] gi|167031322|ref|YP_001666553.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|148509612|gb|ABQ76472.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida F1] gi|166857810|gb|ABY96217.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] gi|313496644|gb|ADR58010.1| Polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida BIRD-1] Length = 230 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 86/155 (55%), Gaps = 11/155 (7%) Query: 60 FYVWIFRGTPLLVQLFVIFYG-----------LPHIGIVFDSFVAIIISLTLNFSAYISE 108 FY + RG P L+ + +I++G L G+ +F A +I+L L F AY +E Sbjct: 54 FYSTLVRGVPELLWVLLIYFGTVGLMNSLGEALNMPGLELSAFAAGVIALGLCFGAYATE 113 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 + R +I++IPKG +A A+GL++ + + IILPQ + L + F+ ++K T++ S Sbjct: 114 VFRGAILAIPKGHREAGLALGLSKGRILSRIILPQMWRIALPGLGNLFMILMKDTALVSV 173 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I + EI + +Q V+ T +P Y A +YL LT Sbjct: 174 IGLEEIMRHSQIGVTVTKEPFTFYMVAACIYLGLT 208 >gi|318059838|ref|ZP_07978561.1| putative glutamate ABC transporter permease protein [Streptomyces sp. SA3_actG] gi|318077305|ref|ZP_07984637.1| putative glutamate ABC transporter permease protein [Streptomyces sp. SA3_actF] Length = 214 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 101/182 (55%), Gaps = 5/182 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI--FRGTPLLVQLFVIFYGL 81 TL + + +++L +GF +A R+ + SL + W+ R TPL + F + GL Sbjct: 18 TLELTVYASLLALALGFVMASFRV---APVGSLRVFGTAWVTVLRNTPLTLLFFAVLLGL 74 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 P G+V + +++L SA+I E +RS I ++PKGQ +A+ ++G++ QT+ +IL Sbjct: 75 PRFGLVLPFQLFAVLALGCYTSAFICEALRSGINTVPKGQGEAARSLGMSFGQTLTAVIL 134 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ P+ S+ I++ K++++A ++ E+ T + + + + ++ +A YLI Sbjct: 135 PQAFRAVIPPVGSQLIALAKNSAIAGAFSVTELLGTYKTLNELGFNIVWVFVWIAVGYLI 194 Query: 202 LT 203 LT Sbjct: 195 LT 196 >gi|218507415|ref|ZP_03505293.1| probable amino acid ABC transporter, permease protein [Rhizobium etli Brasil 5] Length = 194 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/154 (35%), Positives = 90/154 (58%), Gaps = 3/154 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+II+ +P ++ A VT+ I + + +IGF +AV R + +I + V + R Sbjct: 6 NVIIEQWPAIVSGA-GVTIMIWILGTTAAAVIGFLVAVAR-QYGGVLIDKALGGVVAVLR 63 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTP L+Q+F+++YG P IG+ D A +I +++ +AY SEI RS ++PKG +A Sbjct: 64 GTPFLIQIFLVYYGGPFIGLDLDPVPAGLIGISIYGAAYFSEIFRSGFQAVPKGHIEAGE 123 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 + LTR+Q + I+LP+ +T +P S + IL Sbjct: 124 CVCLTRRQIVWRILLPE-MTMLVLPPSVNMVVIL 156 >gi|242280828|ref|YP_002992957.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242123722|gb|ACS81418.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 593 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/153 (36%), Positives = 89/153 (58%), Gaps = 11/153 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGI-------VFD---SFVAIIISLTLNFSAYISEII 110 YV FR TPLLVQLF ++ LP +G+ +FD ++ + L + S++++E+I Sbjct: 100 YVEFFRNTPLLVQLFFWYFALP-MGLPEAARNFLFDQNFEMLSATVGLGIYTSSFMAEVI 158 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R+ I SIPKG +A+Y+ GLT QT+ IILP PL SEF++ +K++S+A + Sbjct: 159 RAGIQSIPKGLLEAAYSSGLTPFQTLTKIILPLAFRAIIPPLGSEFLNNMKNSSLAMVVG 218 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +PEI +Q+I T++ +YL L+ Sbjct: 219 VPEICWASQQIEGMTFKGFEATTAATVIYLSLS 251 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 111/202 (54%), Gaps = 5/202 (2%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMH-FYVWIFRGTPLLVQLFVIFYGLPHI- 84 ++ I+ +S IG + + R S + LI Y+ + RG PL++ +F I++ +P + Sbjct: 393 MSVIAISVSFFIGLIVGIGRT--SKNKLFLIPSTLYIELIRGNPLIMVIFWIYFFIPILT 450 Query: 85 GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQT 144 G + F + I+LT+ AY++EI+RS I ++P GQ++A+ + GLT Q +R +ILPQ Sbjct: 451 GQFLNVFWSATIALTVFTGAYLAEIVRSGIQNLPPGQFEAAVSTGLTYWQAMRKVILPQA 510 Query: 145 ITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY-QPLIIYCELAFVYLILT 203 + + +FI+I K TS+A I + E+ AQ + + P IY +AF+Y I Sbjct: 511 LKQMLPAIVGQFIAIFKDTSLAFVIGVLELTFVAQGLNNRLMIYPFEIYTTVAFLYFICC 570 Query: 204 SFCYIIQIKIESSVTQHTYSVD 225 ++ ++E ++ T+ + Sbjct: 571 YLMSLVARRLERKLSTETFRLQ 592 >gi|301629417|ref|XP_002943836.1| PREDICTED: hypothetical protein LOC100485408 [Xenopus (Silurana) tropicalis] Length = 502 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 126/220 (57%), Gaps = 14/220 (6%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH- 59 M+++W + + + A+ + ++ ++++ +++GFF+A+ R + + + + Sbjct: 1 MQFDWHYTLGLLWNGDFWRAVGTVVELSLETWLLGIVLGFFLALAR----QSELRWLRNS 56 Query: 60 --FYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRS 112 Y+W FR PLLV L + Y LP + ++ + + A +I+L L+ +AYI+EI R Sbjct: 57 AGVYIWFFRSLPLLV-LLIFVYNLPQVFPSTSVVLSNPYSAGLIALVLSEAAYIAEIHRG 115 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 ++++ KGQ +A A+G+ + R I++PQ + + L++E+I+I+K TS+ S I++ Sbjct: 116 GLLAVVKGQREAGKALGVGYRGVQRLIVVPQALRVALPTLANEYITIVKLTSLVSVISLS 175 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYL-ILTSFCYIIQI 211 EI Q++ + + + +AF Y+ I+T F +++++ Sbjct: 176 EILLVGQQLYTQNFLVMETMLAVAFYYVFIVTVFSWLLRV 215 >gi|258509858|ref|YP_003172609.1| ABC transporter glutamine-binding periplasmic protein [Lactobacillus rhamnosus GG] gi|257149785|emb|CAR88758.1| ABC transporter, glutamine-binding periplasmic protein [Lactobacillus rhamnosus GG] Length = 486 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/160 (36%), Positives = 92/160 (57%), Gaps = 5/160 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +++IFRG PLLV I+ G+P IG +FVA II+LTLN AY + ++ I ++ Sbjct: 327 FIYIFRGLPLLVLALFIYTGVPSLIGSKIPAFVAGIITLTLNEGAYTAAFVKGGIQAVDV 386 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ ++GL + +R +ILPQ I ++FI LK TS+ S I I E+ QT + Sbjct: 387 GQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGILELTQTGK 446 Query: 180 RIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIES 215 I++ + I+ +A +YLI LT +Q ++E+ Sbjct: 447 IIIARNMEGFKIWTMVALIYLIIITVLTWLSNWVQQRMEA 486 >gi|241113706|ref|YP_002973541.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861914|gb|ACS59580.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 276 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 118/225 (52%), Gaps = 25/225 (11%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +++TL + + V +++G +A++ + ++ +I +VW FRG PL+VQ+F F Sbjct: 46 GVLLTLELTAGAMVFGIVLGCLLALMATS-QNPVLKVIAAGFVWWFRGVPLIVQIFFWFN 104 Query: 80 ---GLPHIGIVFDSF-----------VAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 +P +G+ SF +A ++L L+ +A +SEIIR ++++ +GQ +A+ Sbjct: 105 IALFIPQVGM--GSFTISINDLVTPALAGFLALGLHEAANMSEIIRGGLVAVDRGQREAA 162 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL + QT +I+PQ P ++ I +LK+T++ S I + ++ AQ I + Sbjct: 163 TALGLKKTQTFLTVIMPQATRIIVPPTGNQAIGMLKATAIVSVIGMQDLLTQAQAIYARN 222 Query: 186 YQPLIIYCELAFV----YLILTSFCYIIQIKIESSVTQHTYSVDK 226 + + EL FV YL +TS I Q +E + + +K Sbjct: 223 F----LVIELLFVASIWYLAITSVASIGQHYLEKRLVPTGRTAEK 263 >gi|238921539|ref|YP_002935054.1| polar amino acid ABC transporter, inner membrane subunit [Edwardsiella ictaluri 93-146] gi|238871108|gb|ACR70819.1| polar amino acid ABC transporter, inner membrane subunit [Edwardsiella ictaluri 93-146] Length = 223 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 51/144 (35%), Positives = 79/144 (54%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ F GTPL+V LFV++YGLP+ G+ SF ++ TLN SAY + + S+ + + + Sbjct: 62 YISFFVGTPLIVLLFVVYYGLPNYGVHLSSFAVAVLGFTLNVSAYNASYLYSAWLGLDEA 121 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 + A+ A G T Q HI+LPQ + S L+++ I+ LK +S A I + F Q Sbjct: 122 ELRAARAQGFTDLQVYWHIVLPQVFSRSTPSLTNQVIANLKDSSYAFLIGFIDFFSRIQE 181 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 + ST +Q Y A Y+ + S Sbjct: 182 VASTNFQFFHAYLFAALSYIAMVS 205 >gi|26987023|ref|NP_742448.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida KT2440] gi|24981642|gb|AAN65912.1|AE016219_5 amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] Length = 230 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 86/155 (55%), Gaps = 11/155 (7%) Query: 60 FYVWIFRGTPLLVQLFVIFYG-----------LPHIGIVFDSFVAIIISLTLNFSAYISE 108 FY + RG P L+ + +I++G L G+ +F A +I+L L F AY +E Sbjct: 54 FYSTLVRGVPELLWVLLIYFGTVGLMNSLGEALNMPGLELSAFAAGVIALGLCFGAYATE 113 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 + R +I++IPKG +A A+GL++ + + IILPQ + L + F+ ++K T++ S Sbjct: 114 VFRGAILAIPKGHREAGLALGLSKGRILSRIILPQMWRIALPGLGNLFMILMKDTALVSV 173 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I + EI + +Q V+ T +P Y A +YL LT Sbjct: 174 IGLEEIMRHSQIGVTVTKEPFTFYMVAACIYLGLT 208 >gi|75906962|ref|YP_321258.1| amino acid ABC transporter permease [Anabaena variabilis ATCC 29413] gi|75700687|gb|ABA20363.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC transporter membrane protein / neutral amino acid ABC transporter membrane protein [Anabaena variabilis ATCC 29413] Length = 308 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/236 (28%), Positives = 115/236 (48%), Gaps = 36/236 (15%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTP 69 D++ L+ ++ +L IA + +++ I+G + R+ SD ++ I YV IFR TP Sbjct: 73 DTYSLALWVGLINSLRIAFVGVILTTIVGSIAGIARL--SDNWLVRNISLVYVEIFRNTP 130 Query: 70 LLVQL----FVIFYGLPHI---------------GIVFD------SFVAIIISLTLNFSA 104 LL+QL F +F GLP G+ F A+++ L A Sbjct: 131 LLLQLLFWYFAVFLGLPKADNKISLGGFISLSQNGLELPWFTFSPEFSALLLGLIFYTGA 190 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 +I+EI+R I S+ KGQW+A ++GL +R +I PQ + PL+S+++++ K++S Sbjct: 191 FIAEIVRGGIQSVSKGQWEAGRSLGLNPSLIMRLVIFPQALRVIIPPLTSQYLNLTKNSS 250 Query: 165 VASTITIPEIF--------QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIK 212 +A I P+I+ QT + + L + LI+ +F +QIK Sbjct: 251 LAIAIGYPDIYFVASTTFNQTGKAVEVMLLLMLTYLSLSLTISLIMNAFNRTVQIK 306 >gi|255283434|ref|ZP_05347989.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Bryantella formatexigens DSM 14469] gi|255266082|gb|EET59287.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Bryantella formatexigens DSM 14469] Length = 267 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 16/198 (8%) Query: 23 VTLPIACISFVISLIIGFFIAVI-------------RIFFSDTIISLIMHFYVWIFRGTP 69 VT+ IA + +I IIGF + V+ RIF + +I+ YV +FRGTP Sbjct: 30 VTMAIALVGTLIGCIIGFAVGVVQTIPVSKRDGLPKRIFLK--AVKVILSAYVELFRGTP 87 Query: 70 LLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 ++VQ I+YG + I + A +++N AY++E +R I+SI GQ + + AI Sbjct: 88 MMVQAMFIYYGSQSLFKINMSMWFAAYFIVSINTGAYMAETVRGGILSIDPGQTEGAKAI 147 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+T QT+ +ILPQ + + + I +K T V S I E+F A+ + T Y Sbjct: 148 GMTHFQTMTSVILPQALRNIMPQIGNNLIINIKDTCVLSIIGTVELFFAAKSVAGTFYTY 207 Query: 189 LIIYCELAFVYLILTSFC 206 + +Y +LT C Sbjct: 208 FEAFTIAMVIYFVLTFTC 225 >gi|171059884|ref|YP_001792233.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix cholodnii SP-6] gi|170777329|gb|ACB35468.1| polar amino acid ABC transporter, inner membrane subunit [Leptothrix cholodnii SP-6] Length = 225 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++ +P LL A TL ++ + VI + +G +R + ++ + YV + Sbjct: 6 FLAVLAEWPALLRGA-AFTLGLSAFAAVIGVALGIACGWVRAW-GPKPLAWGVATYVELI 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP +VQLF IF+GLP +G+ V+ +I++ +N AY EI+R+ I P+GQ +A+ Sbjct: 64 RNTPFIVQLFFIFFGLPSLGLRLSPEVSSVIAMVVNLGAYAGEIVRAGIEGTPRGQIEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++ L Q ++LP ++ L S+ + ++ ++V I+ E+ A I S Sbjct: 124 RSLALDEAQVFIRVVLPPSLGRVWPALVSQIVIVMLGSAVCGQISAQELSYAANLIQSRN 183 Query: 186 YQPLIIYCELAFVYLILT 203 ++ Y A +YL+L Sbjct: 184 FRAFEAYLIAAGIYLLLA 201 >gi|330958425|gb|EGH58685.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 225 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/178 (33%), Positives = 101/178 (56%), Gaps = 2/178 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q+ + A+V TL I ++ ++ L++ F IA++R+ + YV + RG LV L Sbjct: 17 QVAHGALV-TLQITFLAELLVLVLSFAIALMRLS-PFRALRWFATLYVEVLRGISALVLL 74 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F +F+ LP GI ++ L L FSAY SEIIRS++I++ +GQ DA A+ Sbjct: 75 FYLFFILPLFGIRLSPMTTGVLGLGLTFSAYGSEIIRSALINVSQGQRDAVRALDFGPVS 134 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 R IILPQ + P+ ++ + +LK+TS+ S IT+ ++ + ++V+T Q +I+ Sbjct: 135 AFRRIILPQALPFMIPPMGNQLVELLKTTSLVSLITLTDLTFSGSQLVTTLGQQTLIW 192 >gi|330957731|gb|EGH57991.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 242 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 109/206 (52%), Gaps = 12/206 (5%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + F LL +T+ +A +S +S+++G A ++ S ++ + Y + RG P Sbjct: 16 LKGFGPLLLEGTWMTIKLAVLSLALSILLGLIGATAKLS-SSALLRVPAQIYTTLIRGIP 74 Query: 70 LLVQLFVIFYGLPH-IGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIP 118 LV + +IFY L + ++ D+ F A +I+L + AY +E R +I+S+P Sbjct: 75 DLVLMLLIFYSLQTWLTMLTDAMEWEYIEINPFGAGVITLGFIYGAYFTETFRGAILSVP 134 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+ A GL R Q R+++ PQ + + + + + +LK+T++ S I + ++ + + Sbjct: 135 RGQIEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALVSIIGLADLVKAS 194 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTS 204 Q +TYQ A +YL++TS Sbjct: 195 QDAGKSTYQLFYFLVLAALIYLLITS 220 >gi|309795478|ref|ZP_07689895.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|308120853|gb|EFO58115.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|323958406|gb|EGB54112.1| inner membrane transport system [Escherichia coli H263] Length = 216 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 116/208 (55%), Gaps = 14/208 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +T+ ++ +++I+ ++G F ++R + +S + YV +FR PL+VQ F + +P Sbjct: 1 MTIALSICAWIIAFLVGSFFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIP 59 Query: 83 H-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 IG+ F + F++ ++ L L +A + E +R++I S+P+GQ +A+ A+G Sbjct: 60 ELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMG 119 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 LT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ + Sbjct: 120 LTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAW 179 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSV 217 + + Y+++ +F ++ +E V Sbjct: 180 ESFTAITLAYVLINAFIMLVMTLVERKV 207 >gi|326790343|ref|YP_004308164.1| polar amino acid ABC transporter inner membrane protein [Clostridium lentocellum DSM 5427] gi|326541107|gb|ADZ82966.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium lentocellum DSM 5427] Length = 240 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 100/169 (59%), Gaps = 10/169 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 +E F+L + F +TL ++ + ++++++G V+ + LI Y+ Sbjct: 14 FEEFDLYLQGFS--------MTLRVSIVGLLVAIMLGVLFGVL-YSTKRKPLKLIARVYI 64 Query: 63 WIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 IF+ TPL++Q+F + LP+ IG D F+ ++ + + AY++E+IR+ I ++PKGQ Sbjct: 65 EIFQNTPLVIQIFFYYSCLPYLIGGRVDKFLLGVMGVGIYHGAYVAEVIRTGIEAVPKGQ 124 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +A+ + G + Q +R+IILPQTI PL+++ ++++K+TSV + + Sbjct: 125 LEAANSQGFSYIQAMRYIILPQTIKIIMPPLANQALNLVKNTSVLAMVA 173 >gi|291535161|emb|CBL08273.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Roseburia intestinalis M50/1] Length = 445 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/150 (33%), Positives = 87/150 (58%), Gaps = 15/150 (10%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD----TIISLIMHF 60 + N + DS L + TL I ++ ++ ++ GF IA++R TI++ + Sbjct: 293 YDNFVKDSRYVYLLKGLGNTLLITVLALLVGVVFGFLIAIVRTNHDRNGGLTILNALCKL 352 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF-----VAIIISLTLNFSAYISEIIRSSII 115 Y+ I RGTP+++QL +I+Y ++F S V +I+ LN +AY++EI+RS I+ Sbjct: 353 YLTIVRGTPVMIQLLIIYY------VIFQSIDTGKIVVAVIAFGLNSAAYVAEIVRSGIM 406 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTI 145 ++ GQ++A ++GL KQT+ IILPQ + Sbjct: 407 AVDIGQFEAGRSLGLNYKQTMMSIILPQAV 436 >gi|260889289|ref|ZP_05900552.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Leptotrichia hofstadii F0254] gi|260860700|gb|EEX75200.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Leptotrichia hofstadii F0254] Length = 245 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 108/206 (52%), Gaps = 14/206 (6%) Query: 22 VVTLPIACISFVISLIIGFFIAVIR-----IFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 V TL + I +++G +A ++ I D I +I+ YV I RGTP+++QL Sbjct: 46 VTTLGLTVGGAAIGILLGMLLAFLKFQKTNIEILDMIKDVIIDEYVDIMRGTPMVLQLLT 105 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 L + ++F+++ +I+L LN +AY+ E IRS I SI KGQ +A+ A G+ + + Sbjct: 106 ----LSFVVVIFNNYWIALIALGLNSAAYVEETIRSGIESIDKGQMEAARATGMPYRMAM 161 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY--QPLIIYCE 194 II+PQ I L +EFI++ K T+V I++ +I ++ + + Y +P++ Sbjct: 162 NEIIMPQAIKNILPALLNEFINLFKETAVVGYISVVDITMNSKSLQAVYYSVKPILF--- 218 Query: 195 LAFVYLILTSFCYIIQIKIESSVTQH 220 VY I I ++E + ++ Sbjct: 219 TGLVYYISVKLFSFIGKRLEMRLKEN 244 >gi|259651118|dbj|BAI43280.1| amino acid ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 498 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/160 (36%), Positives = 92/160 (57%), Gaps = 5/160 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +++IFRG PLLV I+ G+P IG +FVA II+LTLN AY + ++ I ++ Sbjct: 339 FIYIFRGLPLLVLALFIYTGVPSLIGSKIPAFVAGIITLTLNEGAYTAAFVKGGIQAVDV 398 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ ++GL + +R +ILPQ I ++FI LK TS+ S I I E+ QT + Sbjct: 399 GQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGILELTQTGK 458 Query: 180 RIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIES 215 I++ + I+ +A +YLI LT +Q ++E+ Sbjct: 459 IIIARNMEGFKIWTMVALIYLIIITVLTWLSNWVQQRMEA 498 >gi|170767557|ref|ZP_02902010.1| histidine ABC transporter, permease protein HisQ [Escherichia albertii TW07627] gi|170123891|gb|EDS92822.1| histidine ABC transporter, permease protein HisQ [Escherichia albertii TW07627] Length = 228 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V+++IIG A ++ + + LI Y + RG P L Sbjct: 4 GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLS-QNRLSGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G TR Q R I+ P + + + + + ILKST++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTRWQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T++P +YL+ T+ + + +E + D Sbjct: 183 AGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERRYSMGVKRAD 227 >gi|111019224|ref|YP_702196.1| ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] gi|110818754|gb|ABG94038.1| ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] Length = 285 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 110/215 (51%), Gaps = 23/215 (10%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+ +T+ + ++ +G +AV R+ + ++ +I Y+W FR PL+VQL F Sbjct: 35 ALWMTVKLTLWGTILGFALGVVLAVSRLS-HNPVLQVIAWVYIWAFRSIPLIVQLLFWFN 93 Query: 80 ----------GLP--------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 G+P + V F A +I L L+ +AY +EIIRS IIS+ GQ Sbjct: 94 ITYLYQTLSLGIPFGPGFFTFEVNGVISGFTAAVIGLALHQAAYSAEIIRSGIISVDHGQ 153 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++G+ R++ I+LPQ + ++E IS+ K TS+ ST+ I E+F Q I Sbjct: 154 IEAAQSLGIPRRRQFFKIVLPQAMRGILPNAANEVISLFKGTSIVSTMAIAELFYQVQVI 213 Query: 182 VSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 + PL++ + Y+ILT+ I Q +E Sbjct: 214 FGRNGRVVPLLMVATI--WYIILTTLLSIGQYYVE 246 >gi|237816315|ref|ZP_04595308.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308 A] gi|260546067|ref|ZP_05821807.1| polar amino acid ABC transporter [Brucella abortus NCTC 8038] gi|260562864|ref|ZP_05833350.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str. 16M] gi|237788382|gb|EEP62597.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308 A] gi|260096174|gb|EEW80050.1| polar amino acid ABC transporter [Brucella abortus NCTC 8038] gi|260152880|gb|EEW87972.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str. 16M] Length = 166 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 49/151 (32%), Positives = 90/151 (59%), Gaps = 4/151 (2%) Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTP+LVQ+F+ +YGLP +G+ A I+++ N S +I+EI+R + + G +A+ Sbjct: 10 RGTPILVQIFLFYYGLPALGLDLSPIQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAA 69 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G+ K +ILPQ PL +E + +K T++ S IT+ E+ +TAQ++ + + Sbjct: 70 IALGIKGKVIWTKVILPQLYIRIMPPLVNELTTTVKGTALLSVITVVEVLRTAQQVANAS 129 Query: 186 YQPL-IIYCE---LAFVYLILTSFCYIIQIK 212 ++PL + C L V L+L+ +++++ Sbjct: 130 FRPLETLLCAAIILFAVNLVLSQCGRVLEMR 160 >gi|91785181|ref|YP_560387.1| His/Glu/Gln/Arg/opine ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91689135|gb|ABE32335.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC transporter membrane protein [Burkholderia xenovorans LB400] Length = 246 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/183 (34%), Positives = 102/183 (55%), Gaps = 13/183 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ ++VI+LI+G V+R + S I YV IFR PL+VQ F+ Sbjct: 26 LLSGFWVTITVSLSAWVIALIVGSLFGVLRTV-PNKWASGIGTLYVAIFRNIPLIVQFFI 84 Query: 77 IFYGLPHI-----GIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + +P + G F F + II L L +A + E +RS I ++P+GQ A Sbjct: 85 WYLVIPELLPVSMGNWFKQLPPGAQFFSSSIICLGLFTAARVCEQVRSGINALPRGQRAA 144 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 145 GLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDY 204 Query: 185 TYQ 187 T Q Sbjct: 205 TSQ 207 >gi|26990305|ref|NP_745730.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida KT2440] gi|148547399|ref|YP_001267501.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida F1] gi|24985259|gb|AAN69194.1|AE016554_1 amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] gi|148511457|gb|ABQ78317.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida F1] gi|313498469|gb|ADR59835.1| Polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida BIRD-1] Length = 239 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 15/223 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 + Q L A +VT+ +A I L +G +A+ + F +FRG P Sbjct: 13 GGWGQALLAGALVTVSLALACLPIGLPLGLVVALAARSRKRLPRAWATTFST-VFRGLPE 71 Query: 71 LVQLFVIFYG--------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 L+ L +I+YG L +G + ++F+A +I+ +L F+A+ SEI ++ ++P Sbjct: 72 LLTLLIIYYGCQIAAQKILAAMGYQGEFLINTFLAAMIAFSLVFAAFSSEIWLAAFKTLP 131 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVP-LSSEFISILKSTSVASTITIPEIFQT 177 KGQ +A A+GL+++ ++LPQ +T A+P LS+ ++S+LK TS+ STI++ ++ + Sbjct: 132 KGQLEACSALGLSKRTGFFKVLLPQ-LTRIALPGLSNNWLSLLKDTSLVSTISLVDLMRQ 190 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 VS T +P+ Y YL+ + + IE +H Sbjct: 191 TNLAVSVTKEPMFFYGVACLGYLLFAALSGRVFAYIERRSNRH 233 >gi|262173298|ref|ZP_06040975.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451] gi|261890656|gb|EEY36643.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451] Length = 265 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 48/140 (34%), Positives = 89/140 (63%), Gaps = 3/140 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQ++++++ P IG+ D F +++L L AY +E+ R + SIP+ Sbjct: 103 YIAVVRNTPLLVQIYLLYFVFGPVIGL--DRFATAVLALALFQGAYTAEVFRGGLNSIPQ 160 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ ++GL+R + +ILPQ + + PL++E +S++K++S+ S + I ++ + Sbjct: 161 GQYEAARSLGLSRFFSFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGR 220 Query: 180 RIVSTTYQPLIIYCELAFVY 199 IVS T P I+ +A +Y Sbjct: 221 NIVSETAMPFEIWFSVAAIY 240 >gi|194397213|ref|YP_002037267.1| ABC transporter permease [Streptococcus pneumoniae G54] gi|194356880|gb|ACF55328.1| ABC transporter, permease protein [Streptococcus pneumoniae G54] Length = 225 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 92/156 (58%), Gaps = 4/156 (2%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G F + I+ ++ H +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAMVLGIFFGAMSTS-KRPILRILAHIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 FYGLP I I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYIS 136 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R IILPQT PL+++ ++++K+TS + I+ Sbjct: 137 AMRLIILPQTFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|158424906|ref|YP_001526198.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158331795|dbj|BAF89280.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 217 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 114/196 (58%), Gaps = 9/196 (4%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L A + T+ ++ I+FV I+GF +A+ R+ S + + + Y+ I +GTPLL+ L Sbjct: 10 EFLCWAALWTVGLSAIAFVGGGIVGFLVALARVSPSPVVRGIAIG-YIQIVQGTPLLILL 68 Query: 75 FVIFYGLPHIGIVFDSFVAII---ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 F+ ++G+ +G F AI+ + LT+ S +++EI R I S+PK QW+A+ + L+ Sbjct: 69 FLFYFGIAIVG--FKEVPAILSAGLGLTIYASGFLAEIWRGCIESVPKTQWEAAECLSLS 126 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 R Q + ++LPQ + + P + I+K+TS+AS + E+ Q + + ++ ++P I Sbjct: 127 RWQRMTKVVLPQAMRIATAPTVGFLVQIVKNTSLASVVGFIELSQAGKLVNNSIFEPFTI 186 Query: 192 YCELAFVYLILTSFCY 207 + +A +Y +L CY Sbjct: 187 FIVVASIYFVL---CY 199 >gi|145639303|ref|ZP_01794909.1| arginine ABC transporter permease protein [Haemophilus influenzae PittII] gi|145271606|gb|EDK11517.1| arginine ABC transporter permease protein [Haemophilus influenzae PittII] gi|301169916|emb|CBW29520.1| arginine transporter subunit [Haemophilus influenzae 10810] gi|309751179|gb|ADO81163.1| Arginine ABC transporter, permease protein ArtM [Haemophilus influenzae R2866] Length = 227 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 100/177 (56%), Gaps = 10/177 (5%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS---------LTL 100 + I ++ Y+ +F GTPLLVQ F+I+ G + DS + ++S L L Sbjct: 41 ENKWIKSAVNLYLTLFTGTPLLVQFFLIYAGPGQFQWIIDSPLWYVLSNAWFCAALALAL 100 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N +AY +++ ++ +IPKGQW++ A+GL R QT++ I++P + + S+E I + Sbjct: 101 NSAAYSTQLFHGAVKAIPKGQWESCGALGLNRIQTLK-ILIPYALKRALPSYSNEIILVF 159 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 K T++ASTITI +I A+++ T Y + IY +YLI+T ++ K+E V Sbjct: 160 KGTALASTITIMDIMGYARQLYGTEYDAITIYGIAGGIYLIITGIATLLLRKLEKKV 216 >gi|253689718|ref|YP_003018908.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756296|gb|ACT14372.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 254 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/170 (33%), Positives = 94/170 (55%), Gaps = 31/170 (18%) Query: 61 YVWIFRGTPLLVQLFVIFYGL------PHIGIV-----------------FDSFVAIIIS 97 Y+ FRGTPL VQ+ V+ + L P G++ + +F++ I++ Sbjct: 69 YISAFRGTPLFVQIMVVHFALVPLFINPRDGLLVTSNIMSVDVARTLRADYGAFLSCIVA 128 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 +TLN AY+SEI R+ I SI +GQ +AS ++G++ +T+R +ILPQ PL + I Sbjct: 129 ITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGRTMRKVILPQAFRRMLPPLGNNAI 188 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTY----QPLIIYCELAFVYLILT 203 +I+K +S+AS I + ++ A R VS Y +P Y ++ VY ++T Sbjct: 189 AIVKDSSLASAIGLADL-AYAARTVSGAYATYWEP---YLAISIVYWVIT 234 >gi|239818082|ref|YP_002946992.1| polar amino acid ABC transporter inner membrane subunit [Variovorax paradoxus S110] gi|239804659|gb|ACS21726.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 256 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/245 (26%), Positives = 118/245 (48%), Gaps = 28/245 (11%) Query: 3 YEWFNL-IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFF-SDTIISLIMHF 60 + WF I+ + L + +TL + + ++ G +A+ R+ S + F Sbjct: 8 FGWFRWDILVEYRDLFWQGAWMTLRMTVVCVLLGSSWGLCLALARLARPRHAPWSWVARF 67 Query: 61 --------YVWIFRGTPLLVQLFVIFYGL------PHIGIV------------FDSFVAI 94 YV FRGTPL VQ+ +I + + P G++ + ++ Sbjct: 68 FLRWPATVYVSFFRGTPLFVQILLIHFAVMPVFIHPATGLLISGDLARELKQEHGALISG 127 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 +++LTLN +AYISE+ R+ I SI +GQ+DA +IG T Q +R+++LPQ PL + Sbjct: 128 VVALTLNSAAYISEVFRAGIQSISRGQFDAGRSIGFTPLQVMRYVVLPQAFRRMLPPLGN 187 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I++LK TS+ S I + E+ A+ + + Y ++ VY ++T + ++E Sbjct: 188 NAIALLKDTSLVSAIGLAELAYAARTVAGAYARYWEPYLAISVVYWVMTLVLTTMLRRLE 247 Query: 215 SSVTQ 219 + + Sbjct: 248 HRLAR 252 >gi|253688086|ref|YP_003017276.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754664|gb|ACT12740.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 222 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 100/172 (58%), Gaps = 12/172 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYG---------LPHI-GIVFDSFVAIIISLTLNF 102 +IS++ Y+ +F GTPLLVQ+F+I+YG +P + ++ ++ +++L LN Sbjct: 43 VISMLAKGYITLFTGTPLLVQIFLIYYGPGQFTSIQQIPWLWNLLSQPWLCAMVALALNS 102 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +++ ++ +IP GQW + A+G+ ++QT+R I+LP + S+E + + KS Sbjct: 103 AAYTTQLFYGAVKAIPAGQWQSCAALGMNQRQTLR-ILLPFAFKRALSSYSNEVVLVFKS 161 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+A TIT+ E+ +Q + TY ++++ +YL + ++ +E Sbjct: 162 TSLAYTITLMEVMGYSQLMYGRTYD-VMVFGAAGIIYLCVNGLLTLLMRWVE 212 >gi|291457062|ref|ZP_06596452.1| amino acid ABC transporter, permease protein [Bifidobacterium breve DSM 20213] gi|291380897|gb|EFE88415.1| amino acid ABC transporter, permease protein [Bifidobacterium breve DSM 20213] Length = 229 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/158 (35%), Positives = 88/158 (55%), Gaps = 8/158 (5%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH----IGIVF 88 +I+ I+ FI R+ + + L+ +V FRGTP LVQLF+I YGLP IGI Sbjct: 31 IIAAILAVFICQARLRGTGVVYWLV-SLFVSFFRGTPQLVQLFLILYGLPRLLLIIGIDI 89 Query: 89 DSFVA---IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTI 145 + + A II+ TLN S +++E R +++ Q +A Y+IG +R Q H+I+P T+ Sbjct: 90 NDWSAGTFYIIATTLNLSCFVAEAYRGGYLAMDYRQIEAGYSIGFSRLQCFFHVIVPGTL 149 Query: 146 TTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 + + L + I +LK S+A TI E+ A R++ Sbjct: 150 QNAVLNLKNLSIDVLKGASLAYTIGAIEVMGYADRMIG 187 >gi|262043883|ref|ZP_06016971.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038737|gb|EEW39920.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 506 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 112/195 (57%), Gaps = 15/195 (7%) Query: 1 MKYEW---FNLI-IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 M ++W F+L I +F + A V + I+ +S+ I L++GF +A ++ + + + Sbjct: 1 MAFDWGYFFSLFSIGAF----WQACVTVIVISTLSWGIGLVVGFLLACAKLS-APRWVKI 55 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIR 111 + Y+W FR PL+V L V Y LP + ++ F+A ++S+T+ +AY++EI R Sbjct: 56 PVELYIWFFRSVPLMV-LLVFVYNLPQLFPVTQPLLGVPFIAGLVSMTVTEAAYMAEIHR 114 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++S+ KGQ +A +A+ + R I++PQ S L +E+I+I+K +S+ S +++ Sbjct: 115 GGLLSVAKGQSEAGHALSFSFIGIQRLIVIPQAFRISLPTLINEYITIIKLSSILSVVSL 174 Query: 172 PEIFQTAQRIVSTTY 186 PE+ T QR+ + + Sbjct: 175 PELLLTGQRLYAQNF 189 >gi|114769151|ref|ZP_01446777.1| putative amino acid ABC transporter permease protein [alpha proteobacterium HTCC2255] gi|114550068|gb|EAU52949.1| putative amino acid ABC transporter permease protein [alpha proteobacterium HTCC2255] Length = 222 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 105/184 (57%), Gaps = 7/184 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + S V++LII F + + R+ ++ I Y+ FRGT +VQ+F +++ LP Sbjct: 18 TIKLTLASGVVALIISFTVGLARLS-RHWVVRAIATIYLEFFRGTSAIVQMFFMYFVLPL 76 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ + +A I++ N AY SE++R+S+ S+ + Q +A+ A+ T Q RH+++PQ Sbjct: 77 LGVFLPALMAGIVACGFNLGAYGSEVVRASVQSVGREQREAAKALNYTNFQLYRHVLIPQ 136 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI---VSTTYQPLIIYCELAFVYL 200 I + I +LK T+VAS ITI ++ +Q I + T +PLI+ + +Y Sbjct: 137 AIPVMIPSFGNLVIELLKLTAVASLITISDLTFMSQIIRVQTALTLEPLIL---IMVIYF 193 Query: 201 ILTS 204 IL+S Sbjct: 194 ILSS 197 >gi|66047102|ref|YP_236943.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|289676779|ref|ZP_06497669.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae FF5] gi|302188857|ref|ZP_07265530.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae 642] gi|63257809|gb|AAY38905.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] gi|330898593|gb|EGH30012.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] gi|330949982|gb|EGH50242.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 242 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 109/206 (52%), Gaps = 12/206 (5%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + F LL +T+ +A +S +S+++G A ++ S ++ + Y + RG P Sbjct: 16 LKGFGPLLLEGTWMTVKLAVLSLALSILLGLIGASAKLS-SSALLRVPAQIYTTLIRGVP 74 Query: 70 LLVQLFVIFYGLPH-IGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIP 118 LV + +IFY L + ++ D+ F A +I+L + AY +E R +I+S+P Sbjct: 75 DLVLMLLIFYSLQTWLTMLTDAMEWEYIEINPFGAGVITLGFIYGAYFTETFRGAILSVP 134 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+ A GL R Q R+++ PQ + + + + + +LK+T++ S I + ++ + + Sbjct: 135 RGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALVSIIGLADLVKAS 194 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTS 204 Q +TYQ A +YL++TS Sbjct: 195 QDAGKSTYQLFYFLVLAALIYLLITS 220 >gi|291302058|ref|YP_003513336.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Stackebrandtia nassauensis DSM 44728] gi|290571278|gb|ADD44243.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Stackebrandtia nassauensis DSM 44728] Length = 246 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/208 (31%), Positives = 114/208 (54%), Gaps = 14/208 (6%) Query: 4 EWFNLIIDSFPQLLYA---AIVVTLPIACIS-FVISLIIGFFIAVIRIFFSDTIISLIMH 59 E ++ +S+ QLL ++VT+ + C+ VIS I+G +A + + + I+ Sbjct: 2 ETLKILQNSWDQLLEGLWITVLVTV-LGCLGTLVISFILGL-MAGSKNIATRGVARTIIE 59 Query: 60 FYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAI-IISLTLNFSAYISEIIRSSIISI 117 F FRGT L+VQLF + +P + FDS +A+ I+ L LN+ AY SEI+R +I ++ Sbjct: 60 F----FRGTSLVVQLFWFVFAMPIMFKVKFDSVIAVGIVVLALNYGAYGSEIVRGAINAV 115 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PK QW+A A+ T Q + +I+PQ P S+ I +LK +++ S I + ++ Sbjct: 116 PKAQWEACVALNFTFWQKLSLVIIPQAWVGMVPPFSNLAIQVLKGSALVSLIGLVDLTLA 175 Query: 178 AQ--RIVSTTYQPLIIYCELAFVYLILT 203 AQ R ++ ++I+ L +Y I++ Sbjct: 176 AQQLRTKASAEGAIVIFAALLVIYFIMS 203 >gi|152981390|ref|YP_001351970.1| glutamate/aspartate ABC type transport system permease protein [Janthinobacterium sp. Marseille] gi|151281467|gb|ABR89877.1| glutamate/aspartate ABC type transport system permease protein [Janthinobacterium sp. Marseille] Length = 243 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 107/198 (54%), Gaps = 12/198 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + TL +A +++ + ++G + V R ++ L YV +FR PLLVQ FV Sbjct: 21 LLSGLGWTLAVALFAWIFAFVVGSIVGVGRTSEKRWLVRL-GGAYVELFRNIPLLVQFFV 79 Query: 77 IFYGLPHIG-------IVFD----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 ++ +P + I D FV ++ L S+ I+E +RS I ++P+GQ +A Sbjct: 80 WYFVVPGLVPAVKAWVITLDPTEHQFVTAVVCLGFFTSSRIAEQVRSGIQALPRGQRNAG 139 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 YA+GLT QT R+++LP PL+SE ++++K+T+VA +I + E+F + + T Sbjct: 140 YALGLTTAQTYRYVLLPMAYRIIIPPLTSELMNLIKNTAVAYSIGLVELFFRTREMGEMT 199 Query: 186 YQPLIIYCELAFVYLILT 203 ++ + +Y+++ Sbjct: 200 FRYFEAFGAATLIYVVIA 217 >gi|116250760|ref|YP_766598.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115255408|emb|CAK06483.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 290 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 119/225 (52%), Gaps = 25/225 (11%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +++TL + + + +++G +A++ + ++ +I +VW FRG PL+VQ+F F Sbjct: 66 GVLLTLELTAGAMMFGIVLGCLLALMATS-QNPVLKVIAAGFVWWFRGVPLIVQIFFWFN 124 Query: 80 ---GLPHIGIVFDSF-----------VAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 +P +G+ SF +A ++L L+ +A +SEIIR +I++ +GQ +A+ Sbjct: 125 IALFIPQVGM--GSFTISINDLVTPALAGFLALGLHEAANMSEIIRGGLIAVDRGQREAA 182 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL + QT +I+PQ P ++ I +LK++++ S I + ++ AQ I + Sbjct: 183 TALGLKKTQTFFTVIMPQATRIIVPPTGNQAIGMLKASAIVSVIGMQDLLTQAQAIYARN 242 Query: 186 YQPLIIYCELAFV----YLILTSFCYIIQIKIESSVTQHTYSVDK 226 + + EL FV YL +TS I Q +E S+ + +K Sbjct: 243 F----LVIELLFVASIWYLAITSVASIGQHYLEKSLVPKGRTAEK 283 >gi|50084481|ref|YP_045991.1| amino acid ABC transporter ATP-binding protein [Acinetobacter sp. ADP1] gi|49530457|emb|CAG68169.1| putative amino acid transporter (ABC superfamily, atp_bind and membrane) [Acinetobacter sp. ADP1] Length = 509 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 111/194 (57%), Gaps = 13/194 (6%) Query: 1 MKYEW---FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI 57 M+++W F+L F + + A V + I+ +S+ I +++GF +A ++ + I + Sbjct: 1 MEFDWEYFFSLF--GFAEF-WKACVTVIVISSLSWFIGMVLGFVLACAKVS-APRWIKIP 56 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRS 112 + Y+W FR PL+V L V Y LP + ++ F+A +IS+T+ +AY++EI R Sbjct: 57 VELYIWFFRSIPLMV-LLVFVYNLPQMFPITQPLLGVPFIAGLISMTVTEAAYMAEIHRG 115 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 ++S+ KGQ +A +A+ R I++PQ + L +EFI+++K +S+ S I++P Sbjct: 116 GLLSVTKGQNEAGHALSFGFFGIQRLIVIPQAFRIALPTLINEFITVIKLSSILSVISLP 175 Query: 173 EIFQTAQRIVSTTY 186 E+ T QR+ + + Sbjct: 176 ELLLTGQRLYADNF 189 >gi|326692921|ref|ZP_08229926.1| ABC-type amino acid transport system, permease component [Leuconostoc argentinum KCTC 3773] Length = 214 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 113/210 (53%), Gaps = 5/210 (2%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 ++FP L+ TL + I+ V SLI+G AV+++ + I + YV +FR PL Sbjct: 7 NNFPTLM-QGFGYTLLSSVIALVGSLILGTVFAVMQVM-PQAWVRRIGNIYVQVFRNIPL 64 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LV F F + + FV+ ++L L SA+I+E +R+ I+++ GQ + + A GL Sbjct: 65 LVITFFFFLVVSQY-VKMSGFVSGTVALMLYTSAFIAETVRAGILAVNGGQMEGARANGL 123 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + Q +RHI+LPQ + L ++FI+++K++S+ + + ++ I + T++ Sbjct: 124 SFAQAMRHIVLPQAFRVALPSLGNQFINLVKNSSILAFVGGLDLMYQGNMIAANTFETFG 183 Query: 191 IYCELAFVYLILT-SFCYIIQIKIESSVTQ 219 Y + +YLI+T Y +Q +E + Q Sbjct: 184 TYIIVGILYLIITLPLSYYMQ-HLERKLKQ 212 >gi|310640486|ref|YP_003945244.1| amino acid abc transporter, permease protein [Paenibacillus polymyxa SC2] gi|309245436|gb|ADO55003.1| Amino acid ABC transporter, permease protein [Paenibacillus polymyxa SC2] Length = 219 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 110/180 (61%), Gaps = 9/180 (5%) Query: 30 ISFVISLIIGFFIAVI-RIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG---LPHIG 85 I+ ++S+ +GF + ++ + F I+ +MH Y+++ RGTPLL+QL +G LP IG Sbjct: 26 ITLILSIPLGFIVTLLAKSRFKP--IAWLMHTYIYVIRGTPLLLQLLFFCFGLPMLPVIG 83 Query: 86 --IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +V D A +++ LN++AY +EI R ++SI KGQ++AS +GL++ QT+ +I+PQ Sbjct: 84 EYLVLDRTTAAVLAFVLNYAAYFAEIFRGGMLSIDKGQYEASQVLGLSKSQTLIRVIVPQ 143 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + +++E +++K T++ + +PE+ A V+ + ++ Y A +YL++ Sbjct: 144 MVRIALPAVTNEATTLVKDTALLYAVAVPELLHFANTAVNRDFS-IVPYVVAAVIYLLMA 202 >gi|218699019|ref|YP_002406648.1| glutamate and aspartate ABC transporter membrane protein [Escherichia coli IAI39] gi|218369005|emb|CAR16759.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI39] Length = 246 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/214 (24%), Positives = 118/214 (55%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ ++G ++R + +S + YV +FR PL+VQ F Sbjct: 25 IWSGFQVTIALSICAWIIAFLVGSLFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F + F++ ++ L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ +F ++ +E V Sbjct: 204 YSAHAWESFTAITLAYVLINAFIMLVMTLVERKV 237 >gi|145633093|ref|ZP_01788825.1| arginine ABC transporter permease protein [Haemophilus influenzae 3655] gi|144986319|gb|EDJ92898.1| arginine ABC transporter permease protein [Haemophilus influenzae 3655] Length = 227 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 100/177 (56%), Gaps = 10/177 (5%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS---------LTL 100 + I ++ Y+ +F GTPLLVQ F+I+ G + DS + ++S L L Sbjct: 41 ENKWIKSAVNLYLTLFTGTPLLVQFFLIYAGPGQFQWIIDSPLWYVLSNAWFCAALALAL 100 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N +AY +++ ++ +IPKGQW++ A+GL R QT++ I++P + + S+E I + Sbjct: 101 NSAAYSTQLFHGAVKAIPKGQWESCGALGLNRIQTLK-ILIPYALKRALPSYSNEIILVF 159 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 K T++ASTITI +I A+++ T Y + IY +YLI+T ++ K+E V Sbjct: 160 KGTALASTITIMDIMGYARQLYGTEYDAITIYGIAGGIYLIITGIATLLLRKLEKKV 216 >gi|229551204|ref|ZP_04439929.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|229315496|gb|EEN81469.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] Length = 498 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/159 (36%), Positives = 91/159 (57%), Gaps = 5/159 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +++IFRG PLLV I+ G+P IG +FVA II+LTLN AY + ++ I ++ Sbjct: 339 FIYIFRGLPLLVLALFIYTGVPSLIGSKIPAFVAGIITLTLNEGAYTAAFVKGGIQAVDV 398 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ ++GL + +R +ILPQ I ++FI LK TS+ S I I E+ QT + Sbjct: 399 GQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGILELTQTGK 458 Query: 180 RIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIE 214 I++ + I+ +A +YLI LT +Q ++E Sbjct: 459 IIIARNMEGFKIWTMVALIYLIIITVLTWLSNWVQRRME 497 >gi|320196176|gb|EFW70800.1| Histidine ABC transporter, permease protein HisQ [Escherichia coli WV_060327] Length = 228 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 12/203 (5%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 F ++ +VTL +A S V+++IIG A ++ + + LI Y + RG P LV Sbjct: 5 FSSVILQGALVTLELAISSVVLAVIIGLIGAGGKLS-QNRLSGLIFEGYTTLIRGVPDLV 63 Query: 73 QLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + +IFYGL +G I D VA II+L + AY +E R + +++PKG Sbjct: 64 LMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGH 123 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ A G TR Q R I+ P + + + + + ILKST++ S + + ++ + Q Sbjct: 124 IEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLA 183 Query: 182 VSTTYQPLIIYCELAFVYLILTS 204 +T++P +YL+ T+ Sbjct: 184 GKSTWEPFYFAIVCGVIYLVFTT 206 >gi|301799735|emb|CBW32301.1| putative amino-acid ABC transporter integral membrane protein [Streptococcus pneumoniae OXC141] Length = 206 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 95/176 (53%), Gaps = 1/176 (0%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 IA + S ++G +++IR + +++ + Y+ + R TPLL+ LF +++GLP IGI Sbjct: 3 IAVWGILGSFLLGLIVSIIR-HYRIPVLAQVATAYIELSRNTPLLIHLFFLYFGLPRIGI 61 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 V S V + L +Y++E RS + +I + Q + AIGLT Q R+++LPQ Sbjct: 62 VLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAIGLTPLQVFRYVVLPQATA 121 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + S+ I ++K TSV S + + ++ A+ ++ Y+ I L YLI+ Sbjct: 122 VALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYETDIALAMLVVAYLIM 177 >gi|288933972|ref|YP_003438031.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|288888701|gb|ADC57019.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] Length = 506 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 112/195 (57%), Gaps = 15/195 (7%) Query: 1 MKYEW---FNLI-IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 M ++W F+L I +F + A V + ++ +S+ I L++GF +A ++ + + + Sbjct: 1 MAFDWGYFFSLFSIGAF----WQACVTVIVVSTLSWGIGLVVGFLLACAKLS-APRWVKI 55 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIR 111 + Y+W FR PL+V L V Y LP + ++ F+A ++S+T+ +AY++EI R Sbjct: 56 PVELYIWFFRSVPLMV-LLVFVYNLPQLFPVTQPLLGVPFIAGLVSMTVTEAAYMAEIHR 114 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++S+ KGQ +A +A+ + R I++PQ S L +E+I+I+K +S+ S +++ Sbjct: 115 GGLLSVAKGQSEAGHALSFSFIGIQRLIVIPQAFRISLPTLINEYITIIKLSSILSVVSL 174 Query: 172 PEIFQTAQRIVSTTY 186 PE+ T QR+ + + Sbjct: 175 PELLLTGQRLYAQNF 189 >gi|260598728|ref|YP_003211299.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ [Cronobacter turicensis z3032] gi|260217905|emb|CBA32479.1| Histidine transport system permease protein hisQ [Cronobacter turicensis z3032] Length = 228 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F Q++ +VTL +A + V+S+ IG A ++ + ++L+ Y + RG P L Sbjct: 4 GFSQVILQGALVTLELALSAVVLSVAIGLVGAGAKLS-RNRPLALVFEAYTTLIRGVPDL 62 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G D +A II+L + AY +E R + +++P+G Sbjct: 63 VLMLLIFYGLQIALNSVTDALGFSQFDIDPMIAGIITLGFIYGAYFTETFRGAFLAVPRG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G T QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTGSQTFRRILFPSMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T+QP +YL+ T+ + + +E T D Sbjct: 183 AGKSTWQPFYFAIVCGLIYLVFTTLSNGVLLLLERRYTVGVKRAD 227 >gi|258541041|ref|YP_003175540.1| glutamine ABC transporter substrate-binding protein [Lactobacillus rhamnosus Lc 705] gi|257152717|emb|CAR91689.1| ABC transporter, glutamine-binding periplasmic protein [Lactobacillus rhamnosus Lc 705] Length = 486 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/159 (36%), Positives = 91/159 (57%), Gaps = 5/159 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +++IFRG PLLV I+ G+P IG +FVA II+LTLN AY + ++ I ++ Sbjct: 327 FIYIFRGLPLLVLALFIYTGVPSLIGSKIPAFVAGIITLTLNEGAYTAAFVKGGIQAVDV 386 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ ++GL + +R +ILPQ I ++FI LK TS+ S I I E+ QT + Sbjct: 387 GQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGILELTQTGK 446 Query: 180 RIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIE 214 I++ + I+ +A +YLI LT +Q ++E Sbjct: 447 IIIARNMEGFKIWTMVALIYLIIITVLTWLSNWVQRRME 485 >gi|224371143|ref|YP_002605307.1| ABC-type amino acid transport system, permease protein [Desulfobacterium autotrophicum HRM2] gi|223693860|gb|ACN17143.1| ABC-type amino acid transport system, permease protein [Desulfobacterium autotrophicum HRM2] Length = 293 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 64/235 (27%), Positives = 115/235 (48%), Gaps = 29/235 (12%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P ++ + +TL I+ + + +L+IG + ++ S + ++ YV R P++V Sbjct: 59 PGMILTGLFITLRISFWATLSALVIGTIMGAMKSGRSH-YLKMVATAYVETIRNIPVIVW 117 Query: 74 LFVIFYGL-----PHIGI-----------------------VFDSFVAIIISLTLNFSAY 105 +F+ +Y L P G+ + F + SL L AY Sbjct: 118 IFIFYYFLGDIIVPLTGLDRAVNMNEGLLRQFLTTFVSDPSLLPVFFSATASLALYEGAY 177 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 +EIIR+ I SI KGQW+AS ++G TR Q +RH+ILPQ + P++ + IS +K +S+ Sbjct: 178 FTEIIRAGIESIEKGQWEASSSLGFTRFQQLRHVILPQALRRMLPPMAGQIISTIKDSSI 237 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S I+I E+ ++S T+ ++ + +Y I+ C + +E +TQ+ Sbjct: 238 VSVISIQELTFQGMELMSATFLTFEVWLTILALYFIVCFCCSMGVAAVERRLTQN 292 >gi|125624393|ref|YP_001032876.1| putative amino-acid ABC transporter permease protein [Lactococcus lactis subsp. cremoris MG1363] gi|124493201|emb|CAL98166.1| putative amino-acid ABC transporter permease protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071180|gb|ADJ60580.1| putative amino-acid ABC transporter permease protein [Lactococcus lactis subsp. cremoris NZ9000] Length = 295 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/160 (33%), Positives = 89/160 (55%), Gaps = 13/160 (8%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI--------GIVFD-----SFVAIIISLT 99 I++ + +V RGTP+LVQL++ + G+P I G ++ + + +I++ Sbjct: 93 ILNQLRALFVSFIRGTPILVQLYLSYTGIPLILKAINMNYGTNYNVNTIPAMLFVIVAFA 152 Query: 100 LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISI 159 LN AY SE IR++I S+ KGQ +A+ ++G+T Q + LP+ T + PL + I + Sbjct: 153 LNEGAYNSETIRAAIQSVDKGQIEAAKSLGMTNFQVFMRVTLPEAATVATAPLGNALIGL 212 Query: 160 LKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 LKSTS+A + E+ AQ I +T++ Y LA VY Sbjct: 213 LKSTSLAFVAGVVEMTARAQIIGGSTFRLFETYLALALVY 252 >gi|304405838|ref|ZP_07387496.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] gi|304345081|gb|EFM10917.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] Length = 230 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 109/200 (54%), Gaps = 29/200 (14%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+ F+ I +FP+LL +++T+ IA ISF++S++ GF I +L+ Sbjct: 1 MQNLGFDAIAKAFPRLL-DGLMLTIQIAGISFLLSIVFGFIIG-----------ALMTLK 48 Query: 61 YVWI----------FRGTPLLVQLFVIFYGLPHIGIVF----DSFVAIIISLTLNFSAYI 106 Y W+ FR ++ LF++FYG I +F D ++ II TL S I Sbjct: 49 YKWLTFPLRVLLDAFRLIHPVIWLFILFYG---IAFLFHAQTDGYIVSIIVFTLWGSFEI 105 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +++RS I S+P+ Q++ S AIGLTR+Q H++LPQ I + + S ++K+TS+ Sbjct: 106 GDLVRSFITSLPRHQFETSMAIGLTRRQMYAHVLLPQIIIRTTPSIVSLATRLIKTTSLV 165 Query: 167 STITIPEIFQTAQRIVSTTY 186 S I + E+ + +Q I+ +Y Sbjct: 166 SLIGVQEMLKVSQNIIQVSY 185 >gi|237798756|ref|ZP_04587217.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021609|gb|EGI01666.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 248 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 99/170 (58%), Gaps = 15/170 (8%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ IA ++++I+LI+G + V+R S ++S I YV IFR PLLVQLF+ ++ +P Sbjct: 32 TVAIAVVAWIIALILGSVLGVMRTVPSR-LVSGIATVYVEIFRNVPLLVQLFIWYFLVPD 90 Query: 84 I-------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + +F+++++ L L +A + E +R+ I ++PKGQ A+ A+G Sbjct: 91 LLPENLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGF 150 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 Q +++LPQ PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 151 KLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|288871380|ref|ZP_06117360.2| amino acid ABC transporter, amino acid-binding protein/permease protein [Clostridium hathewayi DSM 13479] gi|288863721|gb|EFC96019.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Clostridium hathewayi DSM 13479] Length = 283 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 20/199 (10%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDT-----------IISLIMHFYVWIFRGTPLLV 72 T+ IA + +I +IGF + +++ D I LI++ YV +FRGTP++V Sbjct: 46 TMVIAIVGTLIGCLIGFAVGIVQTIPVDKSDNPVKRVILGFIKLILNVYVEVFRGTPMMV 105 Query: 73 QLFVIFYGLPHIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 Q I+YG ++FD F A I +++N AY++E +R I+SI GQ + + A Sbjct: 106 QAMFIYYGSS---VLFDINMSPMFAAYFI-VSINTGAYMAETVRGGILSIDPGQTEGAKA 161 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 IG+T QT+ ++I+PQ + + + I +K T V S I + E+F + + Y Sbjct: 162 IGMTHFQTMVNVIMPQALRNIMPQIGNNLIINIKDTCVLSVIGVVELFYATKGVAGAYYT 221 Query: 188 PLIIYCELAFVYLILTSFC 206 + +Y ILT C Sbjct: 222 YFEAFTITMVIYFILTFTC 240 >gi|254421401|ref|ZP_05035119.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC 7335] gi|196188890|gb|EDX83854.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC 7335] Length = 216 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/185 (36%), Positives = 106/185 (57%), Gaps = 5/185 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ I+FV ++G I ++RI S+ ++S I Y+ F+GTPLL+QLF+ F+G Sbjct: 20 TIILSLIAFVGGGLVGALITLMRIS-SNKLLSRISWLYIEFFQGTPLLLQLFLAFFGFSV 78 Query: 84 I-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + GI VA I+LT SA++ +I R SI ++P+GQW A+ AIG +R IILP Sbjct: 79 VTGINLSPLVAAAIALTAYTSAFLGDIWRGSIQAVPRGQWQAASAIGFGYFDQLRLIILP 138 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + + P + ++K TS+AS I E+ + A I + T Q L+I+ +Y L Sbjct: 139 QAVRLAIAPTVGFLVQVIKGTSLASIIGFTELSRAASLINNVTLQSLLIFGLAGLIYFAL 198 Query: 203 TSFCY 207 CY Sbjct: 199 ---CY 200 >gi|77459312|ref|YP_348819.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77383315|gb|ABA74828.1| amino acid ABC transporter membrane protein 2, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 220 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/204 (25%), Positives = 109/204 (53%), Gaps = 1/204 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L+ + ++ ++ ++ + +IG F ++ + + + FYV + RGTP+ V + Sbjct: 16 EALWQGFLTSVQVSALAILFGTVIGVFAGLV-LTYGKFWMRAPFRFYVDLIRGTPVFVLV 74 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 FY P +G +F A + LTL ++++EI+R ++ ++P+GQ +A AIGLT Q Sbjct: 75 LACFYMAPALGWQISAFQAGALGLTLFCGSHVAEIVRGALQALPRGQMEAGKAIGLTFYQ 134 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 ++ +++LPQ + + I+K++++ S I + E+ + Q+I++ T+ L Y Sbjct: 135 SLGYVLLPQALRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQIIARTFMTLEFYLF 194 Query: 195 LAFVYLILTSFCYIIQIKIESSVT 218 F++ ++ ++ IE V Sbjct: 195 AGFLFFVINYGIELLGRHIEKRVA 218 >gi|315634949|ref|ZP_07890231.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Aggregatibacter segnis ATCC 33393] gi|315476501|gb|EFU67251.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Aggregatibacter segnis ATCC 33393] Length = 186 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/137 (33%), Positives = 85/137 (62%), Gaps = 3/137 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A +TL ++ + V+SL++GFF AV+ + +++ ++ FY+ + R TPLL+Q+F +++ Sbjct: 18 ATFITLELSFWAIVLSLLVGFFCAVVTTY-KIRMLNSVVKFYIELSRNTPLLIQVFFLYF 76 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GL +G+ D F II L +Y++E IR + +I +GQ +++ ++GLT Q R++ Sbjct: 77 GLSKVGLKLDGFTCAIIGLAFLGGSYMAEAIRGGLEAISRGQLESALSLGLTPVQAFRYV 136 Query: 140 ILPQ--TITTSAVPLSS 154 + PQ I T A+ +S Sbjct: 137 LFPQAFAIATPAIGANS 153 >gi|295102408|emb|CBK99953.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Faecalibacterium prausnitzii L2-6] Length = 254 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 112/215 (52%), Gaps = 20/215 (9%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFF-------SDTII---SLIMHFYVWIFRGT 68 + TL + I+ + +++G +A++R+ S+ ++ + + Y + RGT Sbjct: 43 GGVGTTLLVTAIALAMGVLLGSVVALVRVAHDQQRPGRSNPVLGGFNAVCQVYTTVIRGT 102 Query: 69 PLLVQLFVIFYGLPHIGIVFDS---FVAI-IISLTLNFSAYISEIIRSSIISIPKGQWDA 124 P++VQL ++ ++F++ F + ++L +N AY+SEIIR ++++ GQ +A Sbjct: 103 PMMVQLLIMSM------VIFNNSRNFTMVGALALGINSGAYVSEIIRGGLMAVDPGQMEA 156 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++GL T+ II+PQ I L +EFI +LK TS+ + I E+ AQ I++ Sbjct: 157 GRSLGLNYITTMVVIIIPQAIRAVLPALGNEFIMLLKDTSLITVIGGKELLYAAQGIMNR 216 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 TY+ + +A +YL+L + K E + Q Sbjct: 217 TYEAMFPLFGVALIYLVLVMIFTWLLAKFERRLAQ 251 >gi|206576834|ref|YP_002237018.1| amino acid ABC transporter, permease protein/ATP-binding protein [Klebsiella pneumoniae 342] gi|290510951|ref|ZP_06550320.1| amino acid ABC transporter, permease/ATP-binding protein [Klebsiella sp. 1_1_55] gi|206565892|gb|ACI07668.1| amino acid ABC transporter, permease protein/ATP-binding protein [Klebsiella pneumoniae 342] gi|289775944|gb|EFD83943.1| amino acid ABC transporter, permease/ATP-binding protein [Klebsiella sp. 1_1_55] Length = 506 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 112/195 (57%), Gaps = 15/195 (7%) Query: 1 MKYEW---FNLI-IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 M ++W F+L I +F + A V + ++ +S+ I L++GF +A ++ + + + Sbjct: 1 MAFDWGYFFSLFSIGAF----WQACVTVIVVSTLSWGIGLVVGFLLACAKLS-APRWVKI 55 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIR 111 + Y+W FR PL+V L V Y LP + ++ F+A ++S+T+ +AY++EI R Sbjct: 56 PVELYIWFFRSVPLMV-LLVFVYNLPQLFPVTQPLLGVPFIAGLVSMTVTEAAYMAEIHR 114 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++S+ KGQ +A +A+ + R I++PQ S L +E+I+I+K +S+ S +++ Sbjct: 115 GGLLSVAKGQSEAGHALSFSFIGIQRLIVIPQAFRISLPTLINEYITIIKLSSILSVVSL 174 Query: 172 PEIFQTAQRIVSTTY 186 PE+ T QR+ + + Sbjct: 175 PELLLTGQRLYAQNF 189 >gi|188534470|ref|YP_001908267.1| Glutamate/aspartate transport system permease [Erwinia tasmaniensis Et1/99] gi|188029512|emb|CAO97389.1| Glutamate/aspartate transport system permease [Erwinia tasmaniensis Et1/99] Length = 245 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 115/214 (53%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++ ++VI+L +G ++R ++S + YV +FR PL+VQ F+ Sbjct: 25 LWSGFQVTIAVSVCAWVIALCVGSLFGILRTV-PGRLLSSLGACYVELFRNVPLIVQFFI 83 Query: 77 IFYGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P +IG+ F S F ++ L L +A + E +R++I S+P GQ + Sbjct: 84 WYLVVPELLPENIGMWFKSEIDPNIQFFTCSVLCLGLFTAARVCEQVRAAIQSLPSGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+ + + ++ +E V Sbjct: 204 YSAHAYESFTAITLAYIAINAVIMLLMGLVERKV 237 >gi|145593976|ref|YP_001158273.1| polar amino acid ABC transporter, inner membrane subunit [Salinispora tropica CNB-440] gi|145303313|gb|ABP53895.1| polar amino acid ABC transporter, inner membrane subunit [Salinispora tropica CNB-440] Length = 235 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/218 (31%), Positives = 119/218 (54%), Gaps = 23/218 (10%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +++ID F + +TL I ++ + +LI+G +AV+RI + +L YV FR Sbjct: 2 SVLIDKF-DVFAGGFWLTLQICFLAAIGALILGSAVAVLRISPVPPLRALGTA-YVNTFR 59 Query: 67 GTPLLVQLFVIFYGLPHIG------------IVFDS-------FVAIIISLTLNFSAYIS 107 PL + +F +GLP +G +VF F +I+L L SA++ Sbjct: 60 NLPLTIVMFFAAFGLPALGSNADFLRIPGLDLVFSRLGTDLPYFRFALIALVLYTSAFVC 119 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E +RS + ++P GQ +A+ ++GLT Q +RH++LPQ+ T S VPL S I+++K++++ Sbjct: 120 EALRSGVNAVPAGQAEAARSLGLTFIQNLRHVVLPQSWTASVVPLGSVIIAMIKNSALIG 179 Query: 168 TIT-IPEIFQTAQRIVSTTYQPLI-IYCELAFVYLILT 203 I ++ QTA ++ S +P I + ++ YLI+T Sbjct: 180 FFGVIGDLSQTADQLTSAGGEPFIPVAIGISIGYLIMT 217 >gi|199599469|ref|ZP_03212861.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] gi|199589641|gb|EDY97755.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] Length = 475 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/160 (36%), Positives = 92/160 (57%), Gaps = 5/160 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +++IFRG PLLV I+ G+P IG +FVA II+LTLN AY + ++ I ++ Sbjct: 316 FIYIFRGLPLLVLALFIYTGVPSLIGSKIPAFVAGIITLTLNEGAYTAAFVKGGIQAVDV 375 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ ++GL + +R +ILPQ I ++FI LK TS+ S I I E+ QT + Sbjct: 376 GQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGILELTQTGK 435 Query: 180 RIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIES 215 I++ + I+ +A +YLI LT +Q ++E+ Sbjct: 436 IIIARNMEGFKIWTMVALIYLIIITVLTWLSNWVQQRMEA 475 >gi|167564083|ref|ZP_02356999.1| hypothetical protein BoklE_16117 [Burkholderia oklahomensis EO147] Length = 246 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 107/201 (53%), Gaps = 17/201 (8%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VT+ ++ +++I+L++G V+R + +S I YV IFR PL+VQ FV Sbjct: 26 LMSGFWVTVKVSLAAWLIALVVGSLFGVLRTV-PNKWLSAIGTVYVSIFRNIPLIVQFFV 84 Query: 77 IFYGLPHI--------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + +P + G F F A I L L A + E +RS I ++P+GQ Sbjct: 85 WYLVVPELLPASIGTWIKQLPPGTQF--FTASIACLGLFTGARVCEQVRSGINALPRGQR 142 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A A+G T+ QT R+++LP PL+SEF++I K+++VASTI + ++ A+++V Sbjct: 143 AAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLV 202 Query: 183 STTYQPLIIYCELAFVYLILT 203 T Q + + Y+I+ Sbjct: 203 DYTAQTYESFIAVTLAYVIIN 223 >gi|238911979|ref|ZP_04655816.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 226 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/222 (30%), Positives = 115/222 (51%), Gaps = 10/222 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E L++D + A++V++ F+ +II FF+++ R I L M F++ Sbjct: 14 EQLPLVVDGIKETCKLALIVSIT----GFLWGIII-FFLSLSRRPVVKAITRLYMDFFI- 67 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 GTPL++ LFVI+YGLP GI SF + TLN AY + + ++ ++ K + + Sbjct: 68 ---GTPLILILFVIYYGLPQSGIHLSSFTVAVTGFTLNVGAYNAAYMTTAYNALNKYETE 124 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ GL ++Q IILPQ + +S L+++ I+ LK +++ I E F Q + + Sbjct: 125 AAVVQGLNKRQVFLWIILPQVLLSSIPALTNQVINNLKDSTIVFLIQYTEFFARIQEVAA 184 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 T+++ Y A VYLI +F + +E + +H Y D Sbjct: 185 TSFKFFHAYLFAAIVYLIGVTFIVGLTRFLEHRLLRH-YGQD 225 >gi|257067440|ref|YP_003153695.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] gi|256558258|gb|ACU84105.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] Length = 369 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/232 (28%), Positives = 115/232 (49%), Gaps = 20/232 (8%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++EW + F + + ++ TL + + I +G +A++R+ S ++IS + + Sbjct: 104 RWEWGVVAQWFFAESIIRGLLETLRLTAAAGAIGFGLGLVLALMRLSKS-SLISGVSWTF 162 Query: 62 VWIFRGTPLLVQLFVIFY----------GLPHIGIVF---------DSFVAIIISLTLNF 102 W+FR TPLLVQL + + G+P G F +A I+ L L+ Sbjct: 163 SWVFRSTPLLVQLLLWYNLGYLYEQVSLGIPFTGATFFEARTSDLMTPMLAAILGLGLHQ 222 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +E+IR I+S+ +GQ +A+ A+G+ + I+LPQ + P +E I ++K Sbjct: 223 AAYAAELIRGGILSVDQGQLEAASALGIPARDRSLRIVLPQAMRAILPPAFNEIIGLVKG 282 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+ + E+F T Q I T Q L + Y+++TS + Q IE Sbjct: 283 TSIVYVLAHAELFFTVQLIYGRTQQVLPMLLVATLWYVVITSALSVGQYYIE 334 >gi|71736319|ref|YP_276040.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|257486608|ref|ZP_05640649.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|71556872|gb|AAZ36083.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320327103|gb|EFW83117.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330879087|gb|EGH13236.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] gi|331010091|gb|EGH90147.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 248 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 99/170 (58%), Gaps = 15/170 (8%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ IA ++++I+LI+G + V+R S ++S I YV IFR PLLVQLF+ ++ +P Sbjct: 32 TIAIAVVAWIIALILGSVLGVMRTVPSR-LVSGIATVYVEIFRNVPLLVQLFIWYFLVPD 90 Query: 84 I-------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + +F+++++ L L +A + E +R+ I ++PKGQ A+ A+G Sbjct: 91 LLPENLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGF 150 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 Q +++LPQ PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 151 KLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|296532449|ref|ZP_06895173.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296267224|gb|EFH13125.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 222 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/172 (33%), Positives = 98/172 (56%), Gaps = 9/172 (5%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 V++L I C V+ L + RI+ S + YV I R TPLL+ +F I++GL Sbjct: 30 VLSLAIGC---VLGLACAYARQSGRIWLSAPV-----RVYVEIVRCTPLLLLIFFIYFGL 81 Query: 82 PHIGIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 P GI D F + +++L+L AY+SE+ R+ + SIPK +A+ AIG+ Q +++ Sbjct: 82 PEFGIYGMDKFQSFVLTLSLYAGAYMSEVFRAGLASIPKQYVEAAKAIGMRPWQRQVYVV 141 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 LP + +S+ IS+ K TS+A+ I IPE+ A+++ + T++ + ++ Sbjct: 142 LPVMFRITLPSISNNLISLFKDTSLAAAIAIPELTFVARQVNANTFRVMEVW 193 >gi|152969144|ref|YP_001334253.1| putative binding-protein-dependent transport systems inner membrane component [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893600|ref|YP_002918334.1| putative binding-protein-dependent transport system inner membrane component [Klebsiella pneumoniae NTUH-K2044] gi|150953993|gb|ABR76023.1| putative binding-protein-dependent transport systems inner membrane component [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238545916|dbj|BAH62267.1| putative binding-protein-dependent transport system inner membrane component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 213 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/189 (32%), Positives = 105/189 (55%), Gaps = 3/189 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 QLL TL I+ I+ ++ G IA++R+ I L++ Y+ + R TPL+ + Sbjct: 7 QLLIEGAWTTLWISAIAIAFGVVAGLLIALVRMLRLPVIDQLLV-VYISLARATPLVTLV 65 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +F LP +GI D VA I++LTLN SA+ +EI R++ + P+ Q +A+ ++G+ R Sbjct: 66 LFLFLSLPTMGINLDKNVAAIVALTLNTSAFNAEIWRNAFRTFPREQREAAESVGMRRWT 125 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL--IIY 192 R+I+LPQ S L +E ++K + + I + ++ + RI S TY+PL I+ Sbjct: 126 YFRYIMLPQMWIESLPALVNEMSFLIKGSPAIAVIGVVDLTRVTNRISSVTYEPLSPILA 185 Query: 193 CELAFVYLI 201 L +V +I Sbjct: 186 AGLLYVAII 194 >gi|254563287|ref|YP_003070382.1| glutamate and aspartate ABC transporter membrane protein [Methylobacterium extorquens DM4] gi|254270565|emb|CAX26568.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Methylobacterium extorquens DM4] Length = 240 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 19/221 (8%) Query: 1 MKYEW-FNLIIDSFPQ-------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT 52 M Y W + + ++ P+ +L + + T+ A S+ I+ +G + V+R S T Sbjct: 1 MNYTWNWGIFLEPSPEGAGTYADMLLSGLAWTVVTALCSWAIAFTLGSVVGVMRTLPSRT 60 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLP-----HIGIVFDS-----FVAIIISLTLNF 102 + I YV FR PLLVQ+F+ ++ LP +G F ++ L Sbjct: 61 A-NAIGAAYVEGFRNVPLLVQMFLWYFVLPELLPARLGAAVKQMPDAPFYTAVLCLGFFT 119 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +A ++E +R+ I ++P+GQ A A+GLT QT R ++LP PL+SEF++ LK+ Sbjct: 120 AARVAEQVRAGIRALPRGQAQAGLALGLTWAQTYRAVLLPNAYRIILPPLTSEFLNNLKN 179 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 TSVA TI + E+ A+ + ++Q + +Y+ L Sbjct: 180 TSVALTIGLLELTARARSMQEFSFQVFEAFTAATLLYVALN 220 >gi|170016705|ref|YP_001727624.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum KM20] gi|169803562|gb|ACA82180.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Leuconostoc citreum KM20] Length = 479 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/142 (35%), Positives = 81/142 (57%), Gaps = 1/142 (0%) Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 ++IFRG PL+V F I+ GLP + G+ +F A II+L LN AY +R ++ +G Sbjct: 322 IYIFRGLPLMVLAFFIYIGLPGVTGVKIPAFTAGIITLILNEGAYTGAFVRGGFEAVERG 381 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++GL +R +I+PQ + ++FI LK TS+ S I + E+ QT Sbjct: 382 QMEAARSLGLNYNSAMRKVIMPQGLRIMVPSFINQFIITLKDTSILSAIGLLELTQTGTL 441 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 IV+ Q ++ +A +YLI+ Sbjct: 442 IVARNSQGFRVWAIVAVIYLIV 463 >gi|257387739|ref|YP_003177512.1| polar amino acid ABC transporter inner membrane subunit [Halomicrobium mukohataei DSM 12286] gi|257170046|gb|ACV47805.1| polar amino acid ABC transporter, inner membrane subunit [Halomicrobium mukohataei DSM 12286] Length = 238 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/186 (32%), Positives = 102/186 (54%), Gaps = 11/186 (5%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W L + S L +VT+ + S + + GF + I ++ D++ S++ V Sbjct: 10 DW--LFVASNADFLLLGTIVTVLLTITSLSLGFLAGFPMGAIEVYGPDSLRSVVGTVGV- 66 Query: 64 IFRGTPLLVQLFVIFYGLP--HIGIV------FDSFVAIIISLTLNFSAYISEIIRSSII 115 +FRGTP++V + V+++GLP +G V F+A ++L L AY S++ R +I Sbjct: 67 VFRGTPIVVLVVVLYFGLPIPQLGTVPALDIQVTPFLAAALALGLRSGAYQSQVFRGAIQ 126 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 SI +GQ + + +IG+++ Q IRH+I PQ I S +EF +LK TSVA I + E+ Sbjct: 127 SISEGQMEGARSIGMSKLQAIRHVIFPQAIRRSIPGFQNEFTIVLKDTSVAFAIGLAELL 186 Query: 176 QTAQRI 181 A+ + Sbjct: 187 TRAENL 192 >gi|769793|emb|CAA60104.1| artM [Escherichia coli K-12] Length = 222 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 121/218 (55%), Gaps = 14/218 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + + P+L+ + +L + S +++LI+ +I + ++ L+ Y+ +F GT Sbjct: 1 MFEYLPELM-KGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLV-RGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLV++F+I+YG P + ++ + ++ +I+L++N +AY +++ +I +IP Sbjct: 59 PLLVRIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSVNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW + A+G+++K T+ I+LP S S+E + + KSTS+A TIT+ E+ + Sbjct: 119 EGQWQSCSALGMSKKDTL-AILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMGYS 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 Q + TY ++++ +YL++ ++ IE Sbjct: 178 QLLYGRTYD-VMVFGAAGIIYLVVNGLLTLMMRLIERK 214 >gi|206580174|ref|YP_002239815.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|262041363|ref|ZP_06014569.1| amino acid ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288936653|ref|YP_003440712.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|290510295|ref|ZP_06549665.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55] gi|330007453|ref|ZP_08305952.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|206569232|gb|ACI11008.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|259041286|gb|EEW42351.1| amino acid ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288891362|gb|ADC59680.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] gi|289777011|gb|EFD85009.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55] gi|328535464|gb|EGF61932.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 213 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 103/188 (54%), Gaps = 1/188 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 QLL TL I+ I+ ++ G IA++R+ I L++ Y+ + R TPL+ + Sbjct: 7 QLLIEGAWTTLWISAIAIAFGVVAGLLIALVRMLRLPVIDQLLV-VYISLARATPLVTLV 65 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +F LP +GI D VA I++LTLN SA+ +EI R++ + P+ Q +A+ ++G+ R Sbjct: 66 LFLFLSLPTMGINLDKNVAAIVALTLNTSAFNAEIWRNAFRTFPREQREAAESVGMRRWT 125 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 R+I+LPQ S L +E ++K + + I + ++ + RI S TY+PL Sbjct: 126 YFRYIMLPQMWIESLPALVNEMSFLIKGSPAIAVIGVVDLTRVTNRISSVTYEPLSPILA 185 Query: 195 LAFVYLIL 202 +Y+++ Sbjct: 186 AGLLYVVI 193 >gi|227818594|ref|YP_002822565.1| ArtM, ABC-type arginine/histidine transport system, permease component ArtM [Sinorhizobium fredii NGR234] gi|36958849|gb|AAQ87274.1| Transporter [Sinorhizobium fredii NGR234] gi|227337593|gb|ACP21812.1| putative ArtM, ABC-type arginine/histidine transport system, permease component ArtM [Sinorhizobium fredii NGR234] Length = 229 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 110/207 (53%), Gaps = 21/207 (10%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M + W I S+ LL A V T+ + IS I+ +A+ ++ + L Sbjct: 1 MDFSW----IFSYWPLLAAGAVQTVLLLVISVGCGFILAIGLALAQVV-GPRWLKLFARG 55 Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIG---------IVFDSFVAIIISLTLNFSAYIS 107 Y RGTPLL+QL++++YG LP I I+ + F +S TLN++AY + Sbjct: 56 YCTCLRGTPLLIQLWLLYYGVGSLLPMIPGLRASFLWPILREGFFFAAVSFTLNYAAYEA 115 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E++R +++++PKG+ +A + G++ R I LP+ I + ++ E + LK+T +A Sbjct: 116 EVLRGALLAVPKGELEAGRSFGMSSSTLFRRIWLPRAIRIALPTIAGEVVLQLKATPLAF 175 Query: 168 TITIPEIFQTAQRIVSTT---YQPLII 191 T+T+ +++ A ++ T Y+PL++ Sbjct: 176 TVTVMDLYAVAYKVRQDTLLVYEPLMV 202 >gi|54296523|ref|YP_122892.1| hypothetical protein lpp0554 [Legionella pneumophila str. Paris] gi|53750308|emb|CAH11702.1| hypothetical protein lpp0554 [Legionella pneumophila str. Paris] Length = 215 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 107/197 (54%), Gaps = 4/197 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 IV+T+ + +I +++G +++ R + +++ ++ I RGTPL++QL I++ Sbjct: 14 GIVLTMQLLTGGMLIGVLLGTLLSICR---HQGVAGFVINRFISILRGTPLILQLSFIYF 70 Query: 80 GLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 +P +G+ VA I++ LN SAY +EI+RS I S+PKGQ++A+ + + + Sbjct: 71 AVPVLLGMRPSILVAGIVAFGLNSSAYFAEILRSGIESLPKGQFEAALTLQIPTFYLWKD 130 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 IILPQ I + +E I++LK T++ STI ++ + AQ + + + + C F Sbjct: 131 IILPQVIKNIFPAMINEMIALLKETALISTIGGMDLMRQAQTLAAQQFTYFMPLCITGFY 190 Query: 199 YLILTSFCYIIQIKIES 215 Y L + KIE Sbjct: 191 YYSLVLLLEALGKKIEK 207 >gi|182438505|ref|YP_001826224.1| putative amino acid ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467021|dbj|BAG21541.1| putative amino acid ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 243 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/221 (24%), Positives = 117/221 (52%), Gaps = 9/221 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHF 60 ++F+L+ + FP++ + + VTL + +++ ++ F + ++ R+ + + +++ F Sbjct: 3 DFFSLLFEEFPRV-RSGLWVTLQATVLGALLAGVLAFALGLMAGSRLLLARGVSRVVVEF 61 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FRGT L +QLF ++Y +P + G + +++ LNF AY +E++R +I S+P+ Sbjct: 62 ----FRGTSLYIQLFWLYYAMPLLTGYELTPVICGVVAFGLNFGAYGAEVVRGAINSVPR 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ A+ L+ + + +ILPQ ++ I +LK+T + I+ ++ Q Sbjct: 118 GQYEAAIALNLSPSRRLWKVILPQAWVQMIPSFTNLLIQLLKATPLLWLISAADLMTVIQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ T + L Y L Y +L ++ +E S + Sbjct: 178 QLRDRTGETLTAYLTLLAAYFVLAYALTMLMNLLERSAKRR 218 >gi|163858765|ref|YP_001633063.1| amino acids ABC transporter, permease protein [Bordetella petrii DSM 12804] gi|163262493|emb|CAP44796.1| amino acids ABC transporter, permease protein [Bordetella petrii] Length = 234 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 117/211 (55%), Gaps = 12/211 (5%) Query: 1 MKY--EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 M Y ++ L+ + +P L+ + TL + ++++++ +G +AV+R+ + ++ ++ Sbjct: 1 MNYTLDFGALLSNGYPTLILGGLATTLEMTLLAWLLAFALGSLLAVLRML-NLRALNWLI 59 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEI 109 YV R P+LV + + ++G+ I I+ F I++ L +AY+SE Sbjct: 60 ALYVAFHRNVPMLVHILLWYFGVAAIVPPALNDAINIIGGEFFYATIAIGLVTAAYVSED 119 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 +RS+I +IP+GQ +A+ ++GL+ Q +R +ILPQ S PL+++ + + K+TS+A I Sbjct: 120 LRSAIRAIPRGQMEAARSLGLSYLQAMRKVILPQAFKISIPPLTNQTLLLFKNTSLAMAI 179 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 + E+ + I S T++ Y + +YL Sbjct: 180 GLIELTGAGRTIESATFKTFEAYLVVTVLYL 210 >gi|268319111|ref|YP_003292767.1| ABC-type amino acid transport system, permease component [Lactobacillus johnsonii FI9785] gi|262397486|emb|CAX66500.1| ABC-type amino acid transport system, permease component [Lactobacillus johnsonii FI9785] Length = 212 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 99/180 (55%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + I+ SLI+G A++ + + + H Y+ IFR PLLV + + +P Sbjct: 19 TILCSVIALFFSLILGVGFALLEVA-PNKFGRAVAHVYIEIFRNIPLLVITMIFYLIVPQ 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 I F A I LTL SA+I+E +R+ I S+ GQ + + + G+T Q +R++ILPQ Sbjct: 78 IWFKVSGFAAGTIGLTLYTSAFIAETVRAGINSVGDGQMEGARSNGMTYTQAMRYVILPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + PL ++FI+++K++SV + + ++ A I ++++ + Y + YL+LT Sbjct: 138 ALKIVIPPLGNQFINLIKNSSVLAFVAGFDLMYQADVIAFSSFETINTYVVVGLFYLVLT 197 >gi|170694816|ref|ZP_02885966.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170140176|gb|EDT08354.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 214 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/172 (36%), Positives = 98/172 (56%), Gaps = 13/172 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIR----IFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 V L +A I+ I L +G +A+IR FF +++ YV + R P + +IF Sbjct: 17 VVLSVASIALGIPLGLG--LALIRWARVPFFHRIVVA-----YVSLIRSCPAVTLTLLIF 69 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 + LP GI D A I++LTL+ +A+ EI R+++I+ P+ Q+DA+ A + R+ R Sbjct: 70 FALPQFGISLDPTPAAILALTLSTAAFNCEIWRAALINFPRDQYDAALAFAMPRRLRFRR 129 Query: 139 IILPQTITTSAVP-LSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 I++PQ I +A+P L SE +KST + I I EI + A R+ + TY+PL Sbjct: 130 IVMPQ-IWRAALPGLVSEMTLQIKSTPAVAVIGIVEITRAALRVGARTYEPL 180 >gi|325519342|gb|EGC98767.1| amino acid ABC transporter, permease protein [Burkholderia sp. TJI49] Length = 231 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 33/216 (15%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---DTIISLIMHFYVWIF 65 ++ S+ LL ++ T+ + VIS + GF +A+ F + +++ + + Sbjct: 5 VLSSYGALLMLGVLTTVKL----LVISAVFGFGLAIAVAFARLSPNPLVARGSKAFTEVI 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVF----------------DSFVAIIISLTLNFSAYISEI 109 RGTPLLVQ+++I+YG +G +F D F + +L ++ AY+ E+ Sbjct: 61 RGTPLLVQIYLIYYG---VGSLFAGWPALRDSVLWPFLRDGFWYVAFALVISVGAYVGEV 117 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 +R+ + +PKG+ +A+ A+G+ R + LP+ I L+ E + +LKST++AST+ Sbjct: 118 LRAGLRGVPKGEIEAARAMGMRPSMIARRVWLPRAIQILLPTLAGETVMMLKSTALASTV 177 Query: 170 TIPEIFQTAQRIVS---TTYQPL----IIYCELAFV 198 + ++ A I + TY+PL +IY LAF+ Sbjct: 178 AVMDVLGAANYIRAQTLRTYEPLLAIAVIYVVLAFL 213 >gi|283834046|ref|ZP_06353787.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter youngae ATCC 29220] gi|291070189|gb|EFE08298.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter youngae ATCC 29220] Length = 246 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 118/214 (55%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++ +++I+ +IG ++R + +S I YV +FR PL+VQ F Sbjct: 25 LWSGFQVTVALSITAWIIAFLIGSLFGILRTV-PNRFLSGIGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P +IG+ F S F++ ++ L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVIPELLPENIGMWFKSELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E + Sbjct: 204 YSAHAWESFTAITLAYVLINAVIMLVMNLVERKI 237 >gi|157144752|ref|YP_001452071.1| hypothetical protein CKO_00479 [Citrobacter koseri ATCC BAA-895] gi|157081957|gb|ABV11635.1| hypothetical protein CKO_00479 [Citrobacter koseri ATCC BAA-895] Length = 228 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F +++ +VTL +A S V++++IG A ++ + + LI Y + RG P L Sbjct: 4 GFSGVIFQGALVTLELALSSVVLAVLIGLVGAGAKLS-QNRVTGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL IG I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNAVTDAMGIGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G T Q R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTGSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +T++P +YL+ T+ Sbjct: 183 AGKSTWEPFYFAVVCGLIYLVFTT 206 >gi|170721982|ref|YP_001749670.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169759985|gb|ACA73301.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 239 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 15/223 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 + Q L A +VT+ +A I L +G +A+ + F +FRG P Sbjct: 13 GGWGQALLAGALVTVSLALACLPIGLPLGLVVALAARSRKRLPRAWSTTFST-VFRGLPE 71 Query: 71 LVQLFVIFYG--------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 L+ L +I+YG L +G + ++F+A +I+ +L F+A+ SEI ++ ++P Sbjct: 72 LLTLLIIYYGCQIAAQQLLAAMGYQGEFLINTFLAAMIAFSLVFAAFSSEIWLAAFKTLP 131 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVP-LSSEFISILKSTSVASTITIPEIFQT 177 KGQ +A A+GL ++ ++LPQ +T A+P LS+ ++S+LK TS+ STI++ ++ + Sbjct: 132 KGQLEACAALGLGKRTAFFKVVLPQ-LTRIALPGLSNNWLSLLKDTSLVSTISLVDLMRQ 190 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 VS T +P+ Y YL+ ++ + IE +H Sbjct: 191 TNLAVSVTKEPMFFYGVACLGYLLFSALSGRVFAYIERRSNRH 233 >gi|261822750|ref|YP_003260856.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261606763|gb|ACX89249.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 254 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 94/170 (55%), Gaps = 31/170 (18%) Query: 61 YVWIFRGTPLLVQLFVIFYGL------PHIGIV-----------------FDSFVAIIIS 97 Y+ FRGTPL VQ+ V+ + L P G++ + +F++ +++ Sbjct: 69 YISAFRGTPLFVQIMVVHFALVPLFINPRDGLLVTSNIMSVDFARTLRSDYGAFLSCVVA 128 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 +TLN AY+SEI R+ I SI +GQ +AS ++G++ +T+R +ILPQ PL + I Sbjct: 129 ITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGRTMRKVILPQAFRRMLPPLGNNAI 188 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTY----QPLIIYCELAFVYLILT 203 +I+K +S+AS I + ++ A R VS Y +P Y ++ VY ++T Sbjct: 189 AIVKDSSLASAIGLADL-AYAARTVSGAYATYWEP---YLAISIVYWVIT 234 >gi|331698685|ref|YP_004334924.1| polar amino acid ABC transporter inner membrane subunit [Pseudonocardia dioxanivorans CB1190] gi|326953374|gb|AEA27071.1| polar amino acid ABC transporter, inner membrane subunit [Pseudonocardia dioxanivorans CB1190] Length = 336 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 117/222 (52%), Gaps = 22/222 (9%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +++TL + +S V L+ G +A+ R+ S ++ L+ YVW+FR PL+V L ++ Sbjct: 88 GLLITLKVTALSAVFGLLGGVVLALCRLSRS-PVLQLVSWGYVWLFRSVPLIVLLLFLYN 146 Query: 80 ----------GLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIISIPKG 120 G+P G F F V ++ L+LN +AY +E++R I+S+ +G Sbjct: 147 FSALYPSLGLGVP-FGPTFVQFDETALATEIVIAVVGLSLNEAAYAAEVVRGGILSVDQG 205 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+GL R+ R I+ PQ + + ++ I ++KSTS+ +++ ++F Q Sbjct: 206 QHEAAAALGLPRRYQFRRIVAPQALRSIVPNYVNQLIGLIKSTSLVFYVSLLDLFGQVQS 265 Query: 181 IVSTTYQPLIIYCELAFV-YLILTSFCYIIQIKIESSVTQHT 221 + ST ++ +A V Y+ILTS ++Q +E + + Sbjct: 266 LGSTYPGDIVPLLMVATVWYVILTSIVSVVQYYVERRFARGS 307 >gi|219871255|ref|YP_002475630.1| arginine transporter permease subunit ArtQ [Haemophilus parasuis SH0165] gi|219691459|gb|ACL32682.1| arginine transporter permease subunit ArtQ [Haemophilus parasuis SH0165] Length = 209 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 49/163 (30%), Positives = 97/163 (59%), Gaps = 7/163 (4%) Query: 64 IFRGTPLLVQLFVIFYGLPHI-----G--IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + RG P ++ +F+I++G P + G + +F +++L++ F++Y S+ +R +I + Sbjct: 41 LLRGLPEILVVFLIYFGAPEVLEMITGEYVELGAFGCGVVALSIIFASYASQSLRGAIQA 100 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP GQW++ A+GL+R T +I++PQ + LS++++ +LK T++ S I + +I + Sbjct: 101 IPLGQWESGAALGLSRGYTFVNIVMPQVWRHALPGLSNQWLVLLKDTALVSLIGVHDIMR 160 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + I ++T+QP Y A +YL +T +I K+E T+ Sbjct: 161 QTELINTSTHQPFTWYGTAALIYLGVTLVSQVIIRKLELRFTR 203 >gi|218459930|ref|ZP_03500021.1| probable amino acid ABC transporter, permease protein [Rhizobium etli Kim 5] Length = 227 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 100/166 (60%), Gaps = 14/166 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ +A ++ I L+IGF +A+ + + + L Y IFRG P L+ LF+I+Y Sbjct: 52 GLQVTVSVAIVTLPIGLVIGFLVALGQQS-EEKPLRLAAGIYTTIFRGLPELLTLFIIYY 110 Query: 80 GL-----------PHIG--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G+ ++G I ++F+A +I+L++ FSAY SE++ S+ +IPKGQ++A Sbjct: 111 GMQMLIQSLLELAGYVGPPIEINAFLAGVIALSVVFSAYCSEVLLSAFRAIPKGQYEAGD 170 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 ++GL R +T+R IILPQ + + L++ ++ +LK+ ++ +P Sbjct: 171 SLGLHRGRTLRLIILPQLVRIALPGLTNLWMVLLKTRPMSRLSALP 216 >gi|83952545|ref|ZP_00961276.1| ABC polar amino acid transporter, inner membrane subunit [Roseovarius nubinhibens ISM] gi|83836218|gb|EAP75516.1| ABC polar amino acid transporter, inner membrane subunit [Roseovarius nubinhibens ISM] Length = 221 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 9/203 (4%) Query: 4 EWFNL--IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++FN+ +I ++P +L + +TL I + + L+ G F A + + + + + Sbjct: 7 QFFNIEIMIAAWPTILRG-LWMTLAICAVVIPMGLLGGLF-AALGMLSQNRALRWATVGF 64 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V FR P LV L ++ GLP G+ F A+ I+ LN SAY EI R+ I S+ GQ Sbjct: 65 VDFFRAIPPLVLLIFVYSGLPFAGLRLSPFAAVAIAFLLNNSAYYGEIFRAGIGSVGTGQ 124 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ + GL QT+ +++LPQ + L S I ++K TS+AS +++ E+ A Sbjct: 125 TEAARSTGLGASQTMAYVVLPQAVRNVLPDLISNTIEVVKLTSLASVVSLAEMLYAADMA 184 Query: 182 VSTTY--QPLIIYCELAFVYLIL 202 S TY PL++ A +YL++ Sbjct: 185 RSVTYSASPLVLA---AGIYLVI 204 >gi|125973969|ref|YP_001037879.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium thermocellum ATCC 27405] gi|256005805|ref|ZP_05430757.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium thermocellum DSM 2360] gi|281418129|ref|ZP_06249149.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium thermocellum JW20] gi|125714194|gb|ABN52686.1| amino acid ABC transporter membrane protein, PAAT family [Clostridium thermocellum ATCC 27405] gi|255990251|gb|EEU00381.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium thermocellum DSM 2360] gi|281409531|gb|EFB39789.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium thermocellum JW20] gi|316939833|gb|ADU73867.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium thermocellum DSM 1313] Length = 220 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 89/164 (54%), Gaps = 10/164 (6%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTI---ISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 + C F+++L+ + +I F S + + ++ +VW+ RGTPL++QL +IF+G Sbjct: 17 LNCKLFILTLLFALPLGMIIAFGSMSRFYPLRWLVRTFVWVIRGTPLMLQLIIIFFGPGL 76 Query: 84 IGIVF-------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 + + F FVA ++ +N++ Y SEI R I SIP GQ++A +G+T+ Q Sbjct: 77 LNMPFSWPSGESGRFVAATVAFVINYACYFSEIYRGGIESIPVGQYEAGQVLGMTKTQIF 136 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 H+ L Q I P+ +E I+++K TS+A I EI A Sbjct: 137 FHVTLLQVIKRIVPPIGNEVITLVKDTSLARIIANKEIIMMAGE 180 >gi|227114069|ref|ZP_03827725.1| amino acid ABC transporter [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 254 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/170 (33%), Positives = 94/170 (55%), Gaps = 31/170 (18%) Query: 61 YVWIFRGTPLLVQLFVIFYGL------PHIGIV-----------------FDSFVAIIIS 97 Y+ FRGTPL VQ+ V+ + L P G++ + +F++ I++ Sbjct: 69 YISAFRGTPLFVQIMVVHFALVPLFINPRDGLLVTSNIMSVDFARTLRSDYGAFLSCIVA 128 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 +TLN AY+SEI R+ I SI +GQ +AS ++G++ +T+R +ILPQ PL + I Sbjct: 129 ITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGRTMRKVILPQAFRRMLPPLGNNAI 188 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTY----QPLIIYCELAFVYLILT 203 +I+K +S+AS I + ++ A R VS Y +P Y ++ VY ++T Sbjct: 189 AIVKDSSLASAIGLADL-AYAARTVSGAYATYWEP---YLTISIVYWVIT 234 >gi|110635477|ref|YP_675685.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110286461|gb|ABG64520.1| amino acid ABC transporter membrane protein, PAAT family [Chelativorans sp. BNC1] Length = 295 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/198 (33%), Positives = 113/198 (57%), Gaps = 8/198 (4%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFYVWIFRGTP 69 SFP L+ A V + I ++ + L+ G +AV R+ T I I Y IFRG P Sbjct: 79 SFP-LILKAFWVNIYIFVVAEICVLVWGLIVAVARLIPGKTAAPIRAIATLYTDIFRGMP 137 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAI----IISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 ++ +++I +GLP G+ +++ II+LTL F AY++E+ R+ I SI Q A+ Sbjct: 138 AIITIYLIGFGLPLSGLPILKDLSVETYAIIALTLTFGAYVAEVYRAGIESIHWSQVAAA 197 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++GLT QT+R++I+PQ + PL ++FI + K T++ + I + F A +I+S+ Sbjct: 198 RSLGLTYMQTMRYVIVPQAVRRIVPPLLNDFIGLQKDTALVNVIGSIDAFNQA-KILSSN 256 Query: 186 YQPLIIYCELAFVYLILT 203 Y L +AF+++++T Sbjct: 257 YFNLSPVTVVAFLFVVIT 274 >gi|28871314|ref|NP_793933.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28854565|gb|AAO57628.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] gi|330966687|gb|EGH66947.1| amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] gi|331015652|gb|EGH95708.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 248 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 99/170 (58%), Gaps = 15/170 (8%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ IA ++++I+LI+G + V+R S ++S I YV IFR PLLVQLF+ ++ +P Sbjct: 32 TIAIAVVAWIIALILGSVLGVMRTVPSR-LVSGIATAYVEIFRNVPLLVQLFIWYFLVPD 90 Query: 84 I-------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + +F+++++ L L +A + E +R+ I ++PKGQ A+ A+G Sbjct: 91 LLPADLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGF 150 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 Q +++LPQ PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 151 KLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|50122459|ref|YP_051626.1| amino acid ABC transporter [Pectobacterium atrosepticum SCRI1043] gi|49612985|emb|CAG76436.1| amino acid ABC transporter [Pectobacterium atrosepticum SCRI1043] Length = 254 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 94/170 (55%), Gaps = 31/170 (18%) Query: 61 YVWIFRGTPLLVQLFVIFYGL------PHIGIV-----------------FDSFVAIIIS 97 Y+ FRGTPL VQ+ V+ + L P G++ + +F++ +++ Sbjct: 69 YISAFRGTPLFVQIMVVHFALVPLLINPRDGLLVTSNIMSVDFARTLRSDYGAFLSCVVA 128 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 +TLN AY+SEI R+ I SI +GQ +AS ++G++ +T+R +ILPQ PL + I Sbjct: 129 ITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGRTMRKVILPQAFRRMLPPLGNNAI 188 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTY----QPLIIYCELAFVYLILT 203 +I+K +S+AS I + ++ A R VS Y +P Y ++ VY ++T Sbjct: 189 AIVKDSSLASAIGLADL-AYAARTVSGAYATYWEP---YLAISIVYWVIT 234 >gi|311898347|dbj|BAJ30755.1| putative ABC transporter ATP-binding protein [Kitasatospora setae KM-6054] Length = 337 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 106/201 (52%), Gaps = 23/201 (11%) Query: 34 ISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY----------GLPH 83 + +G +AV R+ + + SL F VW+FR TPLLVQL + + LP Sbjct: 106 LGFALGTLLAVARLSDNPVLQSLSWGF-VWLFRATPLLVQLLLWYNIGALYPTLSLSLPF 164 Query: 84 IGIVF--------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 G +F + +I LTL+ +A+ +E++RS ++S+ +GQ +A+ ++GL R + Sbjct: 165 GGELFSVKTVNLLGPVLTTLIGLTLHEAAFAAEVVRSGVLSVDQGQLEAASSLGLGRARV 224 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYC 193 +R I+LPQ + P + I LK T+V S + + ++ + Q I + TYQ PL++ Sbjct: 225 LRRIVLPQAMRAILPPAGNMLIGTLKGTAVISVLAVHDLLFSVQVIYNQTYQVIPLLLVA 284 Query: 194 ELAFVYLILTSFCYIIQIKIE 214 L Y+ +TS + Q +E Sbjct: 285 TL--WYVAVTSVLSVGQYYLE 303 >gi|58336907|ref|YP_193492.1| glutamine ABC transporter permease [Lactobacillus acidophilus NCFM] gi|227903465|ref|ZP_04021270.1| glutamine ABC superfamily ATP binding cassette transporter permease [Lactobacillus acidophilus ATCC 4796] gi|58254224|gb|AAV42461.1| glutamine ABC transporter permease [Lactobacillus acidophilus NCFM] gi|227868785|gb|EEJ76206.1| glutamine ABC superfamily ATP binding cassette transporter permease [Lactobacillus acidophilus ATCC 4796] Length = 213 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 99/174 (56%), Gaps = 1/174 (0%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 I+ + SLI+G A++ + +I Y+ +FR PLLV + + + +P + Sbjct: 25 IALIFSLILGVVFALLEVA-PPKFGRVIAKIYIEVFRNIPLLVIVMIFYLIVPRYIVKLS 83 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 F A I LTL SA+I+E +RS I SI +GQ + + + G+T Q +R++ILPQ + Sbjct: 84 GFQAGTIGLTLYTSAFIAETVRSGINSIGEGQMEGALSNGMTYTQAMRYVILPQAMKIVI 143 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++SV + + ++ AQ I +T++ + Y + YLILT Sbjct: 144 PPLGNQFVNLVKNSSVLAFVAGFDLMYQAQLIAFSTFRTIDTYIIVGLFYLILT 197 >gi|307331404|ref|ZP_07610523.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Streptomyces violaceusniger Tu 4113] gi|306882963|gb|EFN14030.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Streptomyces violaceusniger Tu 4113] Length = 249 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 5/179 (2%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIR 111 I+ + FYV IFRGT LV +F +F+ +P G S A +++L L + AY SEI+R Sbjct: 45 IVRFLTGFYVEIFRGTSALVLMFWLFFVMPLAFGYQLVSMWAAVLALGLTYGAYGSEIVR 104 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 +I S+ Q +A+ A+ T Q +R +ILPQ I P ++ I +LK+T++ S +++ Sbjct: 105 GAIASVAPAQREAAIALSFTPAQRMRRVILPQAIPEMIPPFNNLLIELLKATALVSAVSV 164 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVY----LILTSFCYIIQIKIESSVTQHTYSVDK 226 +I AQ T L IY + +Y +LT +++ + ++ + Q DK Sbjct: 165 ADITFAAQLSRLATGDSLEIYAIILVLYFVLAFVLTRLMRLLERRAKAGIGQAPVKSDK 223 >gi|333023518|ref|ZP_08451582.1| putative glutamate ABC transporter permease protein [Streptomyces sp. Tu6071] gi|332743370|gb|EGJ73811.1| putative glutamate ABC transporter permease protein [Streptomyces sp. Tu6071] Length = 214 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 108/205 (52%), Gaps = 10/205 (4%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI--FRGTPLLVQLFVIFYGL 81 TL + + +++L +GF +A R+ + SL W+ R TPL + F + GL Sbjct: 18 TLELTVYASLLALALGFVMASFRV---APVGSLRAFGTAWVTVLRNTPLTLLFFAVLLGL 74 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 P G+V + +++L SA+I E +RS I ++PKGQ +A+ ++G++ QT+ +IL Sbjct: 75 PRFGLVLPFQLFAVLALGCYTSAFICEALRSGINTVPKGQGEAARSLGMSFGQTLTTVIL 134 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ P+ S+ I++ K++++A ++ E+ T + + + + ++ +A YLI Sbjct: 135 PQAFRAVIPPVGSQLIALAKNSAIAGAFSVTELLGTYKTLNELGFNIVWVFVWIAVGYLI 194 Query: 202 LTSFCYIIQIKIESSVTQHTYSVDK 226 LT + I + +H + V + Sbjct: 195 LT-----LAISALFNYLEHRWGVPR 214 >gi|332715443|ref|YP_004442909.1| amino acid ABC transporter membrane spanning protein [Agrobacterium sp. H13-3] gi|325062128|gb|ADY65818.1| amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 221 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 1/177 (0%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L+ VVT+ + + V+ ++ F ++R+ I+S + Y +FRGT LLVQLF Sbjct: 9 MLWQGAVVTMTMTLAALVVGTVLAFCFGILRVE-GGPILSTVALCYTEVFRGTSLLVQLF 67 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +Y LP +G+ FD ++ L + Y +EI+R ++ S+ Q +A+ A+ TR QT Sbjct: 68 WFYYALPLVGLSFDPVTTGVMVLAAHAGGYGAEIVRGALSSVSVQQLEAARALNFTRMQT 127 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 + I LPQ I + I LK +S+ S I+I ++ AQ I + T IY Sbjct: 128 LFRISLPQAIVEMMPSFGNLAIETLKLSSLVSLISITDLTFAAQSIRNLTLDSTSIY 184 >gi|218548237|ref|YP_002382028.1| histidine/lysine/arginine/ornithine ABC transporter membrane protein [Escherichia fergusonii ATCC 35469] gi|218355778|emb|CAQ88391.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|323967749|gb|EGB63161.1| inner membrane transport system [Escherichia coli M863] gi|323977491|gb|EGB72577.1| inner membrane transport system [Escherichia coli TW10509] gi|324112845|gb|EGC06821.1| inner membrane transport system [Escherichia fergusonii B253] gi|325496652|gb|EGC94511.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily [Escherichia fergusonii ECD227] gi|327252579|gb|EGE64238.1| histidine transport system permease protein hisQ [Escherichia coli STEC_7v] Length = 228 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V+++IIG A ++ + LI Y + RG P L Sbjct: 4 GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLS-QNRFSGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G TR Q R I+ P + + + + + ILKST++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +T++P +YL+ T+ Sbjct: 183 AGKSTWEPFYFAIVCGVIYLVFTT 206 >gi|76574839|gb|ABA47313.1| ABC-type amino acid transport system, permease component [Pseudomonas cichorii] Length = 246 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/235 (26%), Positives = 120/235 (51%), Gaps = 31/235 (13%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L+ + LL+ ++TL ++ + +I+ +GF + + RI S + S Y+ +FR Sbjct: 8 ELLGPQYLHLLFDGFLLTLRLSILVCLIATALGFLVCLARIS-SSRLWSWPARGYLSLFR 66 Query: 67 GTPLLVQLFVIFYG--------------LPH----IGIVFD----SFVAIIISLTLNFSA 104 TPLLVQLF ++G +PH G++ + F+A LTL SA Sbjct: 67 NTPLLVQLFFWYFGVSALLPEELVSWLNMPHEINLAGLLIEWPSFEFIAGFWGLTLYSSA 126 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 +I+E R+ + S+ Q A A+GL Q R+++LPQ + T+ PL +++++LK++S Sbjct: 127 FIAEEFRAGVASVRPQQRTAGQALGLRPAQVWRYVVLPQAVRTALGPLLGQYMNVLKNSS 186 Query: 165 VASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + I + E+ ++++ + T++ AF + + YI+ I + ++ Q Sbjct: 187 LTMAIGLAELSYASRQVETETFK--------AFQAFGIATLLYIVSIALIEAIGQ 233 >gi|304393286|ref|ZP_07375214.1| octopine transport system permease protein OccM [Ahrensia sp. R2A130] gi|303294293|gb|EFL88665.1| octopine transport system permease protein OccM [Ahrensia sp. R2A130] Length = 232 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/230 (29%), Positives = 118/230 (51%), Gaps = 22/230 (9%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EW+ L + I VTL + I+ ++ I ++++ + I Y Sbjct: 3 EWYWL--PDYGWRFVEGIWVTLELLGIALFFGFLLAIPIGLVQVT-GPRWLGAIARGYCT 59 Query: 64 IFRGTPLLVQLFVIFYGL----PHIGIVFDSFVAIII---------SLTLNFSAYISEII 110 + RGTPLL+QL++++YGL P+ + +SF+ I+ + L+ +AY I+ Sbjct: 60 MIRGTPLLIQLWLLYYGLGSLFPYFPELRNSFIWPILREAFPYAAFAFILSVAAYEGHIM 119 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R + S+PKG+ +A+ A+G+ R +R I LP+ I L+ E + LKS +ASTIT Sbjct: 120 RGAFASVPKGELEAARAMGMGRFTVLRRIWLPRAIQNVLPTLAGEAVLTLKSVPLASTIT 179 Query: 171 IPEIFQTAQRIVSTT---YQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 I ++F + T Y+PLI + F+YL++T+ ++ +E+ V Sbjct: 180 IFDVFGVGGIVRQETYRIYEPLIF---VGFIYLLITAVLVVLFRWLENRV 226 >gi|207856866|ref|YP_002243517.1| amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206708669|emb|CAR32995.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 226 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 8/219 (3%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---DTIISLIMHFY 61 +FN + + P +V + C +I I GF +I F S ++ I Y Sbjct: 8 FFNDLTEQLP-----LVVDGIKETCKLALIVSITGFLWGIIIFFLSLSHRPVVKAITRLY 62 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + F GTPL++ LFVI+YGLP GI SF + TLN AY + + ++ ++ K + Sbjct: 63 MDFFIGTPLILILFVIYYGLPQSGIHLSSFTVAVTGFTLNVGAYNAAYMTTAYNALNKYE 122 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ GL ++Q IILPQ + +S L+++ I+ LK +++ I E F Q + Sbjct: 123 TEAAVVQGLNKRQVFLWIILPQVLLSSIPALTNQVINNLKDSTIVFLIQYTEFFARIQEV 182 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +T+++ Y A VYLI +F + +E + +H Sbjct: 183 AATSFKFFHAYLFAAIVYLIGVTFLVGLTRFLEHRLLRH 221 >gi|330989514|gb|EGH87617.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] Length = 248 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/170 (33%), Positives = 99/170 (58%), Gaps = 15/170 (8%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ IA ++++I+LI+G + V+R S ++S I YV +FR PLLVQLF+ ++ +P Sbjct: 32 TIAIAVVAWIIALILGSVLGVMRTVPSR-LVSGIATVYVEVFRNVPLLVQLFIWYFLVPD 90 Query: 84 I-------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + +F+++++ L L +A + E +R+ I ++PKGQ A+ A+G Sbjct: 91 LLPENLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGF 150 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 Q +++LPQ PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 151 KLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|182439547|ref|YP_001827266.1| putative ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326780211|ref|ZP_08239476.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] gi|178468063|dbj|BAG22583.1| putative ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326660544|gb|EGE45390.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] Length = 288 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 21/195 (10%) Query: 41 FIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI------ 94 +AV+R+ + ++ + YVW+FR TP+LVQL F +IG ++ + + Sbjct: 97 LLAVMRLS-GNPVLQAVSWGYVWLFRSTPILVQLLFWF----NIGALYPQILGVSTVSLL 151 Query: 95 ------IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 +I LTL+ +AY +E++R I+S+ +GQ +A+ ++GL + R I+LPQ + + Sbjct: 152 GPVTIAVIGLTLHEAAYAAEVVRGGILSVERGQVEAAQSLGLGPWRRFRRIVLPQAMRSI 211 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFC 206 P + I LK TS+ S I + ++ + Q + TYQ PL++ L Y +T+ Sbjct: 212 VPPAGNMLIGTLKGTSIVSIIAVQDLLYSVQLVYHRTYQVIPLLLVATLW--YAAVTTLL 269 Query: 207 YIIQIKIESSVTQHT 221 I Q +E + T Sbjct: 270 SIGQRYVERYYARGT 284 >gi|239834737|ref|ZP_04683065.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239822800|gb|EEQ94369.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 237 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/128 (39%), Positives = 74/128 (57%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 F V I RG P LV L +++GLP G+ SF A +I+L N AY SEIIR+S+ SI Sbjct: 74 FLVEIGRGAPALVLLQFMYFGLPATGLTLTSFAAAVIALAWNTGAYTSEIIRASLQSIHH 133 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ A+G + +R ++LPQ + + L I I + TS+ TI +PE+ A Sbjct: 134 GQREAAEALGFSVLDELRFVLLPQALRVALPALLGFAILIFQGTSLCFTIALPELVSNAY 193 Query: 180 RIVSTTYQ 187 I S T++ Sbjct: 194 EIGSNTFR 201 >gi|94987195|ref|YP_595128.1| ABC-type amino acid transport system, permease component [Lawsonia intracellularis PHE/MN1-00] gi|94731444|emb|CAJ54807.1| ABC-type amino acid transport system, permease component [Lawsonia intracellularis PHE/MN1-00] Length = 230 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 85/144 (59%), Gaps = 1/144 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV I RGTPL+V + +++ LP + I A +I++ +N AYI+EI+R SIISI Sbjct: 60 YVEIIRGTPLIVLVMFLYFALPLALDIHIPPNWAGVIAIGVNSGAYIAEIVRGSIISISH 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ + GLT Q + +II PQ PL+++ I LK TS+ I + E+ + Q Sbjct: 120 GQMEAARSTGLTHAQAMLYIIWPQAFRRMIPPLTNQCIISLKDTSLLVVIGVGELTRQGQ 179 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I+S ++ ++ +A YLI+T Sbjct: 180 EIISVNFRAFEVWLTVAIFYLIMT 203 >gi|326693347|ref|ZP_08230352.1| amino acid ABC transporter periplasmic protein [Leuconostoc argentinum KCTC 3773] Length = 482 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 6/192 (3%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 +F + L+ IV+T+ V++ I G + V+ + + + I ++IFRG PL+ Sbjct: 279 AFLKGLWETIVLTV----FGIVLASIWGIILGVMGVS-QNGFVRGISSTIIYIFRGLPLM 333 Query: 72 VQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 V F I+ GLP IG+ + A I++L LN AY +R ++ +GQ +A+ ++GL Sbjct: 334 VLAFFIYIGLPGVIGMKIPAVTAGILTLVLNEGAYTGAFVRGGFEAVDRGQMEAARSLGL 393 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + +R +I+PQ I ++FI LK TS+ S I I E+ QT IVS Q Sbjct: 394 PYSRAMRRVIMPQGIRIMIPSFINQFIITLKDTSILSAIGILELTQTGSLIVSRNSQGFR 453 Query: 191 IYCELAFVYLIL 202 ++ +A +YLI+ Sbjct: 454 VWAIVAVIYLIV 465 >gi|306833970|ref|ZP_07467094.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] gi|304423971|gb|EFM27113.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] Length = 234 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 100/176 (56%), Gaps = 6/176 (3%) Query: 33 VISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGTPLLVQLFVIFYGLP---HIGI 86 + +LI+ F + VI S + ++ I YV +F+ TPLLVQ ++YGL + I Sbjct: 38 ICALILAFVLGVIFGAMSSSKSRVLKAISRVYVEVFQNTPLLVQFVFVYYGLAIMTNGVI 97 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 + +F ++ + + AYI+E+IRS I ++PKGQ +A+ + G T QT+ IILPQ + Sbjct: 98 MISTFFTAVLCVGIYHGAYIAEVIRSGIEAVPKGQTEAALSQGFTYSQTMSLIILPQAVR 157 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 T PL+++ ++++K+TS + I+ +I TA+ T + + A +Y I+ Sbjct: 158 TILPPLTNQVVNLIKNTSTVAIISGADIMFTAKAWAYETTNYVPAFAGAALLYFIM 213 >gi|257486647|ref|ZP_05640688.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289625251|ref|ZP_06458205.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647248|ref|ZP_06478591.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 2250] gi|298488754|ref|ZP_07006782.1| histidine ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156672|gb|EFH97764.1| histidine ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320325646|gb|EFW81708.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. B076] gi|320327071|gb|EFW83085.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] gi|330867262|gb|EGH01971.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330876918|gb|EGH11067.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] gi|330889585|gb|EGH22246.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] gi|331010125|gb|EGH90181.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 242 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 109/206 (52%), Gaps = 12/206 (5%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + F LL +T+ +A +S +S+++G A ++ S ++ + Y + RG P Sbjct: 16 LKGFGPLLLEGTWMTIKLAVLSLALSILLGLIGASAKLS-SSALLRVPAQIYTTLIRGIP 74 Query: 70 LLVQLFVIFYGLPH-IGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIP 118 LV + +IFY L + ++ D+ F A +I+L + AY +E R +I+S+P Sbjct: 75 DLVLMLLIFYSLQTWLTMLTDAMEWEYIEINPFGAGVITLGFIYGAYFTETFRGAILSVP 134 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+ A GL R Q R+++ PQ + + + + + +LK+T++ S I + ++ + + Sbjct: 135 RGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALVSIIGLADLVKAS 194 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTS 204 Q +TYQ A +YL++TS Sbjct: 195 QDAGKSTYQLFYFLVLAALIYLLITS 220 >gi|71737589|ref|YP_273644.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558142|gb|AAZ37353.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 237 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 109/206 (52%), Gaps = 12/206 (5%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + F LL +T+ +A +S +S+++G A ++ S ++ + Y + RG P Sbjct: 11 LKGFGPLLLEGTWMTIKLAVLSLALSILLGLIGASAKLS-SSALLRVPAQIYTTLIRGIP 69 Query: 70 LLVQLFVIFYGLPH-IGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIP 118 LV + +IFY L + ++ D+ F A +I+L + AY +E R +I+S+P Sbjct: 70 DLVLMLLIFYSLQTWLTMLTDAMEWEYIEINPFGAGVITLGFIYGAYFTETFRGAILSVP 129 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+ A GL R Q R+++ PQ + + + + + +LK+T++ S I + ++ + + Sbjct: 130 RGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALVSIIGLADLVKAS 189 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTS 204 Q +TYQ A +YL++TS Sbjct: 190 QDAGKSTYQLFYFLVLAALIYLLITS 215 >gi|330807009|ref|YP_004351471.1| ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375117|gb|AEA66467.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 231 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/156 (32%), Positives = 86/156 (55%), Gaps = 2/156 (1%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I+ GT L++ ++G P + D+F A +I+L L F AY +E+ R +I++IPKG + Sbjct: 71 IYFGTVNLMRALGEYFGKPDL--ALDAFAAGVIALGLCFGAYATEVFRGAILAIPKGHRE 128 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GL++ + +I+PQ + L + F+ ++K T++ S I + EI + AQ V+ Sbjct: 129 AGVALGLSKWRIFTRLIMPQMWRIALPGLGNLFMILMKDTALVSVIGLEEIMRHAQIGVT 188 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + QP Y AF+YL LT I +E + Sbjct: 189 VSKQPFTFYMVAAFMYLGLTVLAMIGMHLLERRAAR 224 >gi|325578843|ref|ZP_08148890.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Haemophilus parainfluenzae ATCC 33392] gi|325159667|gb|EGC71799.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Haemophilus parainfluenzae ATCC 33392] Length = 223 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 119/223 (53%), Gaps = 28/223 (12%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI----------FRGTP 69 A ++TL +A + SLI+G +++I +L + YV+I RG P Sbjct: 12 AALMTLGLA----ICSLIVGLLLSII-------FTALEANKYVFIAKPASVVIALLRGLP 60 Query: 70 LLVQLFVIFYGLPHI-----G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 ++ + +I++G + G I F +F + +L+L F++Y S+ +R +I +IPKGQW Sbjct: 61 EILVVLLIYFGSTQVVEMLTGEYIEFSAFGCGVFALSLIFASYASQTLRGAIQAIPKGQW 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 ++ A+GL+R T H+I+PQ + LS++++ +LK T++ S I + ++ + A I Sbjct: 121 ESGAALGLSRPYTFIHLIMPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLMRQAGYIN 180 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + T++P Y A +YL++T K+E T+ V+ Sbjct: 181 TNTHEPFTWYGIAALIYLVITLISQAGIRKLELRFTRFERGVE 223 >gi|292487795|ref|YP_003530670.1| arginine ABC transporter inner membrane protein [Erwinia amylovora CFBP1430] gi|292899025|ref|YP_003538394.1| arginine ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291198873|emb|CBJ45983.1| arginine ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291553217|emb|CBA20262.1| Arginine ABC transport system, inner membrane component [Erwinia amylovora CFBP1430] gi|312171914|emb|CBX80171.1| Arginine ABC transport system, inner membrane component [Erwinia amylovora ATCC BAA-2158] Length = 223 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 94/172 (54%), Gaps = 12/172 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYG---LPHI-------GIVFDSFVAIIISLTLNF 102 + S++ Y+ +F GTPLLVQ+F+I+YG P + ++ ++ +++L+LN Sbjct: 43 VFSMLTRGYITLFTGTPLLVQIFLIYYGPGQFPSVQNVSWLWSLLSQPWLCALLALSLNS 102 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY + + ++ +IP GQW A A+G+ RK +R I+LP + S+E + + KS Sbjct: 103 AAYTTLLFHGAVRAIPSGQWQACAALGMDRKDQLR-ILLPYAFKRALSSYSNEVVLVFKS 161 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+A TIT+ E+ Q + TY + ++ VYL + ++ IE Sbjct: 162 TSLAYTITLMEVMGQGQLLYGRTYD-IGVFAAAGVVYLCVNGLLTLLMRLIE 212 >gi|239816641|ref|YP_002945551.1| polar amino acid ABC transporter inner membrane protein [Variovorax paradoxus S110] gi|239803218|gb|ACS20285.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 218 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 100/187 (53%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M++++ +++D +LL I T+ + I+ VI + +G A R + ++ Sbjct: 1 MEFDFGAVLVDW--RLLAKGIAWTVGLTAIATVIGMAVGVACAWARAS-GPAWLRWVVGS 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TP +VQLF IF+GLP G+ VA II++ +N AY +EIIR+ I + PKG Sbjct: 58 YVELIRNTPFIVQLFFIFFGLPAAGVKLTPEVASIIAMVMNLGAYSTEIIRAGIEATPKG 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++ L + Q ++LP + + S+ I ++ ++V I+ E+ A Sbjct: 118 QIEAAVSLALDKVQVFTRVVLPPALKKVWPAMVSQIIIVMLGSAVCGQISTEELSYAANL 177 Query: 181 IVSTTYQ 187 I S ++ Sbjct: 178 IQSRNFR 184 >gi|148989075|ref|ZP_01820475.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] gi|147925572|gb|EDK76649.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] Length = 206 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 1/176 (0%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 IA + S ++G +++IR + ++S + Y+ + R TPLL+QLF +++GLP IGI Sbjct: 3 IAVWGILGSFLLGLIVSIIR-HYRILVLSQVATAYIELSRNTPLLIQLFFLYFGLPRIGI 61 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 V S V + L +Y++E RS + +I + Q + AIGLT Q +++LPQ Sbjct: 62 VLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAIGLTPLQVFYYVVLPQATA 121 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + S+ I ++K TSV S + + ++ A+ ++ Y+ I L YLI+ Sbjct: 122 VALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYETDIALAMLVVAYLIM 177 >gi|227873127|ref|ZP_03991419.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] gi|227841021|gb|EEJ51359.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] Length = 216 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/195 (33%), Positives = 114/195 (58%), Gaps = 7/195 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L ++V+L I I+ + SL +G +A R+ + +IS I+ Y+ RGTPL++QLF+ Sbjct: 10 LGEGLLVSLGIFAITLLFSLPLGLLVAFGRMH-KNPLISGIIKIYISFMRGTPLMLQLFM 68 Query: 77 IFYGLPHIGIV----FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 ++YG +I V A+ I LN++AY +EI RS I S+ +GQ++A+ +G ++ Sbjct: 69 VYYGPYYIFKVSLHPGYRMTAVYIGFILNYAAYFAEIYRSGIQSMDRGQYEAAEILGYSK 128 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLI 190 Q IILPQ +++E IS++K TS+A +I++ E+F A+ + S+ PLI Sbjct: 129 MQCFFRIILPQVWKKILPSITNEVISLVKDTSLAFSISVMEMFTQAKALSSSQSSMFPLI 188 Query: 191 IYCELAFVYLILTSF 205 + L +++ + +F Sbjct: 189 MAGVLYYIFNFVVAF 203 >gi|121607189|ref|YP_994996.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121551829|gb|ABM55978.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 216 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 110/194 (56%), Gaps = 2/194 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ P LL A + L + S +IS ++G A +R+ +++ + V + RG Sbjct: 8 VLEFLPILLQGAKLTVL-VTLGSLLISTLLGLVWAAMRVS-GIGLLAKVSASVVNLLRGI 65 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P++V LF I++ +P G+ + A I+ L + +SAY +E R+ I ++ +GQ +A+ A+ Sbjct: 66 PIIVLLFFIYFVMPDFGVSLTALQAGILGLGIAYSAYQAENFRAGIEAVDQGQVEAAQAM 125 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G++ T+R ++LPQ + + I +LK +S ASTIT+ E+ + I ++T+Q Sbjct: 126 GMSWWLTMRRVLLPQAFRITLPSYGNIMIMMLKDSSQASTITVTELALQGKLIATSTFQN 185 Query: 189 LIIYCELAFVYLIL 202 ++ +A +YLI+ Sbjct: 186 ATVFSLVALLYLIM 199 >gi|322833421|ref|YP_004213448.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321168622|gb|ADW74321.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 249 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 119/214 (55%), Gaps = 3/214 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ +PQ I+ TL I+ ++ + +L +G + + R+ +S +V+ RG Sbjct: 16 LMGQYPQGPLGGILCTLLISLLAVLFALPVGILLGLARLS-PFRWLSWPAACWVYGLRGI 74 Query: 69 PLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PLL+ +F ++ +P IG F ++ +L + SAYI+EI+R I ++P GQ++A+ A Sbjct: 75 PLLMVVFWTYFCVPLLIGHNISGFSTMLCTLVIYESAYIAEIVRGGIQALPGGQYEAARA 134 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY- 186 +G++ +T+R IILPQ + + L S+ +SI+K +++ I +PE+ A ++ + Sbjct: 135 LGMSYFKTLRLIILPQALYNTLPSLVSQLVSIIKDSTLGYVINVPELTFAANQVNNQLLT 194 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +P ++ +A Y I+ + K+E+ +T+ Sbjct: 195 KPFQVFAIVAIGYYIICFSLTWLANKLEARITRK 228 >gi|16760251|ref|NP_455868.1| amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141981|ref|NP_805323.1| amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|167549882|ref|ZP_02343640.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168230056|ref|ZP_02655114.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168235758|ref|ZP_02660816.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168819432|ref|ZP_02831432.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194470226|ref|ZP_03076210.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735220|ref|YP_002114662.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|204927693|ref|ZP_03218894.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213160972|ref|ZP_03346682.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213426275|ref|ZP_03359025.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581183|ref|ZP_03363009.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213611267|ref|ZP_03370093.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213650141|ref|ZP_03380194.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855810|ref|ZP_03384050.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224583872|ref|YP_002637670.1| amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|289805033|ref|ZP_06535662.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289825681|ref|ZP_06544852.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25296627|pir||AF0665 probable amino acid ABC transporter STY1435 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502546|emb|CAD01695.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Typhi] gi|29137610|gb|AAO69172.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|194456590|gb|EDX45429.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194710722|gb|ACF89943.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291169|gb|EDY30522.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204323035|gb|EDZ08231.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205325103|gb|EDZ12942.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205335486|gb|EDZ22250.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205343853|gb|EDZ30617.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|224468399|gb|ACN46229.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322614886|gb|EFY11811.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619326|gb|EFY16206.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623138|gb|EFY19980.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628428|gb|EFY25216.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634835|gb|EFY31566.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638600|gb|EFY35295.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641011|gb|EFY37658.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645406|gb|EFY41934.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651709|gb|EFY48081.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654391|gb|EFY50713.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661231|gb|EFY57457.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665005|gb|EFY61193.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667749|gb|EFY63909.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671839|gb|EFY67960.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677115|gb|EFY73179.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680222|gb|EFY76261.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685349|gb|EFY81345.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194288|gb|EFZ79484.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198153|gb|EFZ83263.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204385|gb|EFZ89393.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205838|gb|EFZ90801.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211050|gb|EFZ95907.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217167|gb|EGA01888.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222862|gb|EGA07220.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227243|gb|EGA11413.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232027|gb|EGA16134.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234554|gb|EGA18641.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238007|gb|EGA22066.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243392|gb|EGA27411.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248906|gb|EGA32831.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253700|gb|EGA37527.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258734|gb|EGA42393.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261766|gb|EGA45336.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266513|gb|EGA50000.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271237|gb|EGA54664.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 226 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 111/224 (49%), Gaps = 9/224 (4%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---DTIISLIMHFY 61 +FN + + P +V + C +I I GF +I F S ++ I Y Sbjct: 8 FFNDLTEQLP-----LVVDGIKETCKLALIVSITGFLWGIIIFFLSLSHRPVVKAITRLY 62 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + F GTPL++ LFVI+YGLP GI SF + TLN AY + + ++ ++ K + Sbjct: 63 MDFFIGTPLILILFVIYYGLPQSGIHLSSFTVAVTGFTLNVGAYNAAYMTTAYNALNKYE 122 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ GL ++Q IILPQ + +S L+++ I+ LK +++ I E F Q + Sbjct: 123 TEAAVVQGLNKRQVFLWIILPQVLLSSIPALTNQVINNLKDSTIVFLIQYTEFFARIQEV 182 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T+++ Y A VYLI +F + +E + +H Y D Sbjct: 183 AATSFKFFHAYLFAAIVYLIGVTFIVGLTRFLEHRLLRH-YGQD 225 >gi|302337320|ref|YP_003802526.1| polar amino acid ABC transporter inner membrane protein [Spirochaeta smaragdinae DSM 11293] gi|301634505|gb|ADK79932.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 220 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 93/160 (58%), Gaps = 3/160 (1%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 +++ +I YV++FR P L+ ++V +YG P++G+ +++L +N +Y++EI+R Sbjct: 50 SVLRVIAKIYVYLFRNIPFLIFVYVAYYGFPYLGVNIPPLTTAVVALAINHGSYMTEIMR 109 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + +I + Q +AS +IGL Q +I+PQTI A + + I ++K TS+ S I I Sbjct: 110 GGLNTIRREQIEASASIGLNIFQQYSLVIIPQTIMEVAPSIVGQTILLVKDTSIISVIGI 169 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 E+ + ++I T P +++ +A Y +L C++ Q+ Sbjct: 170 SELTRIGRQITMLTNSPFLVFFYVAVFYYVL---CFLFQM 206 >gi|293606725|ref|ZP_06689078.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292814875|gb|EFF74003.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 230 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 107/203 (52%), Gaps = 6/203 (2%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W I+ + + TL A S V+S++ G +A++ + + + YV Sbjct: 8 YNWR--IVSQYTGQFATGLANTLIAAGASLVLSVLAGVPLALLHMSHRAAVWRPVA-AYV 64 Query: 63 WIFRGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 R TPLLVQ+++++Y +P + + V I+++TL+ +AY+SEIIR I S+P+ Sbjct: 65 QFIRSTPLLVQIYLVYYAVPMLIPGAKGWSEMVLGIMAMTLHHAAYMSEIIRVGIESVPR 124 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ + + A G+ Q +R+++LPQ + PL + ++K TS+ S IT+ E+ Sbjct: 125 GQIEGAKACGMNYHQRLRYVVLPQAFVNTLPPLLGQTAVLIKDTSLLSLITVFELVAAGV 184 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 ++ S P + +A YL++ Sbjct: 185 QMNSDRIVPNESFLTIAAGYLLI 207 >gi|89899834|ref|YP_522305.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89344571|gb|ABD68774.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 227 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 108/198 (54%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ ++ ++P+LL + + T ++ V ++G A++R +++ I+ YV Sbjct: 7 FSDVLAAWPRLL-SGLKYTAELSAAGIVFGFVLGTLSAIVR-HQKLPVLNGIVSVYVEAI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP LVQ F++F+GL +GI + ++LTLN AY EI+R+ + + KGQ +A+ Sbjct: 65 RNTPFLVQAFLVFFGLSTLGIRLSAEFCAALALTLNAGAYTCEIMRAGLDATHKGQIEAA 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G+ H++L I L+S+F+ ++ STS+ S I+ E+ A + S T Sbjct: 125 ESLGMGWPAIYWHVMLLPAIEKVYPALTSQFVLLMLSTSITSQISAEELTGVANIVQSET 184 Query: 186 YQPLIIYCELAFVYLILT 203 ++ +Y + +YL L+ Sbjct: 185 FRSFEVYLLVGAIYLALS 202 >gi|213970886|ref|ZP_03399009.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|213924409|gb|EEB57981.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 237 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 109/206 (52%), Gaps = 12/206 (5%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + F LL +T+ +A +S +S+++G A ++ S ++ + Y + RG P Sbjct: 11 LKGFGPLLLEGTWMTIKLAVLSLALSILLGLVGASAKLS-SSALLRVPAQIYTTLIRGIP 69 Query: 70 LLVQLFVIFYGLPH-IGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIP 118 LV + +IFY L + ++ D+ F A +I+L + AY +E R +I+S+P Sbjct: 70 DLVLMLLIFYSLQTWLTMLTDAMEWEYIEINPFGAGVITLGFIYGAYFTETFRGAILSVP 129 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+ A GL R Q R+++ PQ + + + + + +LK+T++ S I + ++ + + Sbjct: 130 RGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALVSIIGLADLVKAS 189 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTS 204 Q +TYQ A +YL++TS Sbjct: 190 QDAGKSTYQLFYFLVLAALIYLMITS 215 >gi|220908737|ref|YP_002484048.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece sp. PCC 7425] gi|219865348|gb|ACL45687.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7425] Length = 221 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/118 (38%), Positives = 77/118 (65%), Gaps = 6/118 (5%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD------SFVAIIISLTLNFSAYISEIIRS 112 F++ + RGTP+L Q+ +++YG+ + + FD ++VA I SL LN++AY SE+ R+ Sbjct: 52 RFFIEVVRGTPILTQILLLYYGVGAMLVQFDLSELVNAWVAGIASLALNYAAYESEVFRA 111 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 + S+ +GQ +A+ ++GLT +Q+ IILPQ I PL ++FI +LK +++ S I Sbjct: 112 GLASVDRGQNEAALSLGLTGEQSFTRIILPQAIPLMIPPLVNDFIYMLKDSAIVSVIA 169 >gi|221231514|ref|YP_002510666.1| amino-acid ABC transporter integral membrane protein [Streptococcus pneumoniae ATCC 700669] gi|225854222|ref|YP_002735734.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae JJA] gi|220673974|emb|CAR68484.1| putative amino-acid ABC transporter integral membrane protein [Streptococcus pneumoniae ATCC 700669] gi|225722358|gb|ACO18211.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae JJA] Length = 206 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 1/176 (0%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 IA + S ++G +++IR + ++S + Y+ + R TPLL+QLF +++GLP IGI Sbjct: 3 IAVWGILGSFLLGLIVSIIR-HYRILVLSQVATAYIELSRNTPLLIQLFFLYFGLPRIGI 61 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 V S V + L +Y++E RS + +I + Q + AIGLT Q +++LPQ Sbjct: 62 VLSSEVCATLGLVFLGDSYMAESFRSGLEAISQTQQEIGLAIGLTPLQVFYYVVLPQATA 121 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + S+ I ++K TSV S + + ++ A+ ++ Y+ I L YLI+ Sbjct: 122 VALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYETDIALAMLVVAYLIM 177 >gi|107022812|ref|YP_621139.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|105893001|gb|ABF76166.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia cenocepacia AU 1054] Length = 255 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/228 (30%), Positives = 127/228 (55%), Gaps = 21/228 (9%) Query: 9 IIDS-FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 ++D+ P+LL AA+ TL + +S S+++G +A+ T + ++ + RG Sbjct: 8 LLDTVMPKLL-AAVPTTLALTLLSGAASVLLGVPLALA-AGARHTPLRWSARGWLMLIRG 65 Query: 68 TPLLVQLFVIFYGLPHI------------GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 TPLLVQL++++YG I ++ D+F I++L++N SAY++ I+R +I Sbjct: 66 TPLLVQLYLLYYGFGQIVPREWMRDSWASPLLRDAFWYAIVALSVNESAYVATILRGAIA 125 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +P G+ +A +A G+TR Q +R I+ P+ + L+ E I +LKST +AST+T+ ++ Sbjct: 126 GVPAGEIEAGHAYGMTRTQVLRRIVGPRAWRLALPALTGEAILLLKSTVLASTVTVFDVM 185 Query: 176 QTAQRIVSTT---YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TA + T Y+PL A VY++L + I ++E + ++ Sbjct: 186 GTANTLRFETLRVYEPL---AGAAIVYVVLVALLTIPAARLEQRINRY 230 >gi|330877312|gb|EGH11461.1| amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 242 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 109/206 (52%), Gaps = 12/206 (5%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + F LL +T+ +A +S +S+++G A ++ S ++ + Y + RG P Sbjct: 16 LKGFGPLLLEGTWMTIKLAVLSLALSILLGLVGASAKLS-SSALLRVPAQIYTTLIRGIP 74 Query: 70 LLVQLFVIFYGLPH-IGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIP 118 LV + +IFY L + ++ D+ F A +I+L + AY +E R +I+S+P Sbjct: 75 DLVLMLLIFYSLQTWLTMLTDAMEWEYIEINPFGAGVITLGFIYGAYFTETFRGAILSVP 134 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+ A GL R Q R+++ PQ + + + + + +LK+T++ S I + ++ + + Sbjct: 135 RGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVMLKATALVSIIGLADLVKAS 194 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTS 204 Q +TYQ A +YL++TS Sbjct: 195 QDAGKSTYQLFYFLVLAALIYLMITS 220 >gi|317048144|ref|YP_004115792.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316949761|gb|ADU69236.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 502 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 108/185 (58%), Gaps = 8/185 (4%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-- 84 ++ ++++ +++G +A+ + + ++ Y+W+FR PLLV L IF LP I Sbjct: 27 LSVLTWLGGIVLGLGVALAKQS-RNAVLRNAATCYIWLFRSLPLLVLLIFIF-NLPQIFP 84 Query: 85 ---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 G++ + F A +++L ++ +AYI+EI R ++S+ +GQ++A A+GL Q II+ Sbjct: 85 ATSGMLSNPFAAGLLALIISETAYIAEIHRGGLLSVQRGQFEAGRALGLNTAQIRLSIII 144 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY-L 200 PQ + S L +EFI+I+K TS+ S I++ EI +R+ + ++ + +A Y L Sbjct: 145 PQALRISLPTLVNEFITIVKMTSLVSVISLSEILMVGERLYTDNFKVMETLLAVACYYVL 204 Query: 201 ILTSF 205 I+T F Sbjct: 205 IVTLF 209 >gi|260663041|ref|ZP_05863934.1| amino acid ABC transporter permease component [Lactobacillus fermentum 28-3-CHN] gi|260552662|gb|EEX25662.1| amino acid ABC transporter permease component [Lactobacillus fermentum 28-3-CHN] Length = 229 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 116/220 (52%), Gaps = 9/220 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L DS P +L + + ++L + + F ++ ++G I ++RI S +S FY+ R Sbjct: 17 KLAFDSLPTIL-SGLPMSLFLLVVCFALANVLGILIMLMRIS-SHRFLSWPARFYISFLR 74 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G P+LV LF+ ++G + A I+S T+ +A+I+E RS+ + + +GQ++A+ Sbjct: 75 GIPMLVILFITYFGFN-----MAALPAAILSFTIAPAAFIAEYYRSAFLGVDEGQFEAAR 129 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL I ++ILPQ + L + + + K TS+A+ IT+ E+F A+ + Sbjct: 130 SLGLPYHNIILNVILPQAFRIALPSLGNVMLDLFKGTSLAAMITVSEMFMEAKVVAGAAQ 189 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 + IY +A +Y ++ Q +E + T+S +K Sbjct: 190 DYMSIYIVVAVIYWLVCCLLSFGQSFLEGHLA--TWSKEK 227 >gi|322833890|ref|YP_004213917.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321169091|gb|ADW74790.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 246 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 117/214 (54%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ VT+ ++ +++I+ +IG ++R + I+S I YV +FR PL+VQ F+ Sbjct: 25 IWNGFQVTVALSICAWIIAFLIGSLFGILRTV-PNRILSGIGTCYVELFRNVPLIVQFFI 83 Query: 77 IFYGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P +IG+ F S F + +I L L +A + E +R++I S+P GQ + Sbjct: 84 WYLVVPELLPENIGMWFKSELAPDVQFFTSSVICLGLFTAARVCEQVRAAIQSLPSGQRN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMVNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 204 YSAHAYESFTAITVAYVLINAVIMLLMHFVERKV 237 >gi|301383764|ref|ZP_07232182.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato Max13] gi|302059460|ref|ZP_07251001.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato K40] gi|302133660|ref|ZP_07259650.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato NCPPB 1108] gi|330966543|gb|EGH66803.1| amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] gi|331015689|gb|EGH95745.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 242 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 109/206 (52%), Gaps = 12/206 (5%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + F LL +T+ +A +S +S+++G A ++ S ++ + Y + RG P Sbjct: 16 LKGFGPLLLEGTWMTIKLAVLSLALSILLGLVGASAKLS-SSALLRVPAQIYTTLIRGIP 74 Query: 70 LLVQLFVIFYGLPH-IGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIP 118 LV + +IFY L + ++ D+ F A +I+L + AY +E R +I+S+P Sbjct: 75 DLVLMLLIFYSLQTWLTMLTDAMEWEYIEINPFGAGVITLGFIYGAYFTETFRGAILSVP 134 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+ A GL R Q R+++ PQ + + + + + +LK+T++ S I + ++ + + Sbjct: 135 RGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALVSIIGLADLVKAS 194 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTS 204 Q +TYQ A +YL++TS Sbjct: 195 QDAGKSTYQLFYFLVLAALIYLMITS 220 >gi|302537786|ref|ZP_07290128.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. C] gi|302446681|gb|EFL18497.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. C] Length = 214 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/222 (26%), Positives = 117/222 (52%), Gaps = 11/222 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI-- 64 N++ ++F L + T+ + + +++L++GF +A R+ + S + VW+ Sbjct: 2 NVLTENF-ALYGKGFLGTVELTVYASLLALVLGFLMASFRV---APVGSFRVFGTVWVTV 57 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 R TPL + F + GLP G+V + +++L SA+I E +RS I ++PKGQ +A Sbjct: 58 LRNTPLTLLFFAVLLGLPRFGLVLPFQLFAVLALGCYTSAFICEALRSGINTVPKGQGEA 117 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G++ QT+ ++LPQ + P+ S I++ K++++A ++ E+ T + + Sbjct: 118 ARSLGMSFGQTLGTVVLPQAFRSVIPPIGSTLIALAKNSAIAGAFSVTELLGTYKTLNEL 177 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 Y + + +A YLI+T + I +V + Y V + Sbjct: 178 GYSIIWTFVWIAVGYLIIT-----LSISAVFNVLEKRYGVAR 214 >gi|134100501|ref|YP_001106162.1| amino acid ABC transporter, permease protein [Saccharopolyspora erythraea NRRL 2338] gi|291005020|ref|ZP_06562993.1| amino acid ABC transporter, permease protein [Saccharopolyspora erythraea NRRL 2338] gi|133913124|emb|CAM03237.1| amino acid ABC transporter, permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 315 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/223 (27%), Positives = 117/223 (52%), Gaps = 18/223 (8%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P +L+ +++TL + ++ V+ ++G +AV+R+ + +++ + YVW+FR PLLVQ Sbjct: 68 PAVLHG-LLMTLWLTAVTMVLGFLLGTVLAVMRLS-GNPVLAALSWGYVWLFRSIPLLVQ 125 Query: 74 L---FVIFYGLPHIGI---------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 L F I P +G+ + II L L+ +AY +EI+R I+S+ GQ Sbjct: 126 LLFWFNIGALYPVLGVAPFSVSTVNLIGGTTTAIIGLVLHEAAYAAEIVRGGILSVDAGQ 185 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +++ A+G+ + + +R I+LPQ + P + I LK TS+ S I + ++ + Q I Sbjct: 186 TESAQALGMRKSRVLRRIVLPQAMRAIIPPSGNLLIGTLKGTSIVSVIAVHDLLYSVQII 245 Query: 182 VSTTYQ--PLIIYCELAF--VYLILTSFCYIIQIKIESSVTQH 220 + Y PL++ + + V +LT+ Y ++ +H Sbjct: 246 YNRNYLVIPLLLVACIWYLVVTTVLTTGQYYVERHYARGAERH 288 >gi|118475005|ref|YP_892321.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter fetus subsp. fetus 82-40] gi|118414231|gb|ABK82651.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter fetus subsp. fetus 82-40] Length = 229 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 107/191 (56%), Gaps = 7/191 (3%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH---FYVWIFRGTPLL 71 Q+ + + TL ++ ++ +++ +IG VI + I+++ + YV +F+ TPL+ Sbjct: 20 QMFASGLGFTLGVSILALILAGVIG----VISGMMATGKIAILRYCSRIYVEVFQNTPLV 75 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +QLF +++ LP +GI D F ++ + AY+SE++RS I SIPKGQ++A+ + G + Sbjct: 76 IQLFFLYFALPPMGINLDVFTIGVLGIGAYHGAYMSEVVRSGINSIPKGQFEAATSQGFS 135 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 + + +IILPQ+I P +++ ++++K++SV I E+ + S + Sbjct: 136 YIEQMMYIILPQSIKIILPPATNQAVNLIKNSSVLLIIAGAELMYMSDSYASDSLNYATS 195 Query: 192 YCELAFVYLIL 202 Y +Y I+ Sbjct: 196 YSVAGILYFIM 206 >gi|327478629|gb|AEA81939.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166] Length = 219 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 90/161 (55%), Gaps = 2/161 (1%) Query: 61 YVWIFRGTPLLVQLFVIFY--GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV +FRG+ LLVQLF +++ LP + +F ++ L LN AY +E++R +I S+ Sbjct: 51 YVEVFRGSSLLVQLFWLYFVLPLPPFNVEMSAFAVAVVGLGLNIGAYGAEVLRGAIRSVH 110 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A +A+ +T +R IILPQ + + P ++ I +LK+TS+ S IT+ ++ A Sbjct: 111 RGQHEACHALNMTPLTRMRRIILPQALLAAIPPGTNLLIELLKNTSLVSLITLSDLAFRA 170 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 +++ T L I+ +Y +L ++E + + Sbjct: 171 RQLDQATLMTLEIFGLALVIYFVLAQTINFAMRRLEQRLAR 211 >gi|259908948|ref|YP_002649304.1| arginine transporter permease subunit ArtM [Erwinia pyrifoliae Ep1/96] gi|224964570|emb|CAX56083.1| Arginine transport system permease protein [Erwinia pyrifoliae Ep1/96] gi|283478954|emb|CAY74870.1| Arginine ABC transport system, inner membrane component [Erwinia pyrifoliae DSM 12163] gi|310767149|gb|ADP12099.1| arginine transporter permease subunit ArtM [Erwinia sp. Ejp617] Length = 223 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 95/172 (55%), Gaps = 12/172 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYG---LPHI-------GIVFDSFVAIIISLTLNF 102 ++S++ Y+ +F GTPLLVQ+F+I+YG P + ++ ++ +++L+LN Sbjct: 43 VLSMLTRGYITLFTGTPLLVQIFLIYYGPGQFPSVQNISWLWSLLSQPWLCALLALSLNS 102 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY + + ++ +IP GQW A A+G+ RK +R I+LP + S+E + + KS Sbjct: 103 AAYTTLLFHGAVRAIPSGQWQACAALGMDRKDQLR-ILLPYAFKRALSSYSNEVVLVFKS 161 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+A TIT+ E+ Q + TY + ++ +YL + ++ IE Sbjct: 162 TSLAYTITLMEVMGHGQLLYGRTYD-IGVFAAAGVIYLCVNGLLTLLMRLIE 212 >gi|219852262|ref|YP_002466694.1| polar amino acid ABC transporter, inner membrane subunit [Methanosphaerula palustris E1-9c] gi|219546521|gb|ACL16971.1| polar amino acid ABC transporter, inner membrane subunit [Methanosphaerula palustris E1-9c] Length = 225 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/196 (35%), Positives = 108/196 (55%), Gaps = 3/196 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I SFP LL I VTL + S ++ +IG +A+ +++ ++S I+ YVWIFRG Sbjct: 8 LIGSFPYLL-GGIWVTLGLVLSSLLLGFLIGVPMALAQVY-GKRLLSAIVATYVWIFRGL 65 Query: 69 P-LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 P L++ F P G+ D F I+ L L AY S+I R +I SI GQ A+ + Sbjct: 66 PNLVLLFLFYFGLFPLAGLDVDPFFVGIVVLGLRSGAYQSQIFRGAIQSIGDGQMLAARS 125 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++R Q I +ILPQ + S+E+ +L ++V I I EI A IV+ TYQ Sbjct: 126 LGMSRVQAITSVILPQAFRIALPGWSNEYPILLTDSAVCYAIGIMEILTRANNIVTQTYQ 185 Query: 188 PLIIYCELAFVYLILT 203 P+ ++ A +Y++L Sbjct: 186 PMPVFLICAGIYILLN 201 >gi|307328905|ref|ZP_07608074.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] gi|306885415|gb|EFN16432.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] Length = 297 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/241 (28%), Positives = 122/241 (50%), Gaps = 27/241 (11%) Query: 3 YEWFNLIIDSFP-QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 +EW ++ D F + + A+ +T+ + C + +G +A +R+ S + S + Y Sbjct: 60 WEW-DVFADFFTTRTILKAVWITIQLTCYGTALGFALGIVLAFMRLSRSPFLKS-VAFTY 117 Query: 62 VWIFRGTPLLVQLFVIF----------YGLPHIGIVFDSF---------VAIIISLTLNF 102 +W FR PL+VQL F +G+P G F SF A ++ L L+ Sbjct: 118 IWAFRSIPLIVQLLFWFNLTYLYKRLDFGIP-FGPGFFSFDTAGLVGAMSAAVLGLALHQ 176 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +EI+R ++++ GQ +A+ A+G+ R + +R I+LPQ + + ++E IS+ K Sbjct: 177 AAYAAEIVRGGVLAVDGGQLEAAAALGIPRLRQLRRIVLPQAMRSILPNAANEVISLFKG 236 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TS+ S + I E+F Q I + PL++ + Y+ILT+ I Q +E ++ Sbjct: 237 TSIVSVMAIGELFYQVQVIYGRNGRVVPLLMVATV--WYIILTTVLSIAQYYVERRFSRG 294 Query: 221 T 221 Sbjct: 295 A 295 >gi|46578803|ref|YP_009611.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|120603590|ref|YP_967990.1| polar amino acid ABC transporter inner membrane protein [Desulfovibrio vulgaris DP4] gi|46448215|gb|AAS94870.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio vulgaris str. Hildenborough] gi|120563819|gb|ABM29563.1| amino acid ABC transporter membrane protein 1, PAAT family [Desulfovibrio vulgaris DP4] gi|311232666|gb|ADP85520.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris RCH1] Length = 225 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 108/196 (55%), Gaps = 3/196 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I D+ P +L + VT+ S + +G +AV +++ + L+ YVW FRG Sbjct: 8 IWDALPYILEGS-AVTIATVLGSLALGFCMGVPMAVAQVYGGRPVRYLV-GLYVWFFRGM 65 Query: 69 PLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 P+LV LF+ ++GL + + +F A + L + +AY S+I R SI+++P+GQ A+ A Sbjct: 66 PILVLLFLFYFGLFQALDLNLSAFTASCLVLGMASAAYQSQIFRGSILALPQGQLKAARA 125 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ IR I+LPQ + S S+E+ +LK +++A + PEI + S TY+ Sbjct: 126 LGMSDGAAIRSIVLPQALRLSIPAWSNEYSILLKDSALAFVLGTPEIMARTHFVASRTYE 185 Query: 188 PLIIYCELAFVYLILT 203 L +Y +Y I+T Sbjct: 186 HLPLYMTAGALYFIIT 201 >gi|333024745|ref|ZP_08452809.1| putative ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. Tu6071] gi|332744597|gb|EGJ75038.1| putative ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. Tu6071] Length = 245 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 117/220 (53%), Gaps = 20/220 (9%) Query: 4 EWFNLIIDSFPQL---LYAAIVVTLPIACISFVISLIIGFF----IAVIRIFFSDTIISL 56 ++F+ D F Q+ L+ + T+ A ++FV+S GF AV+R TI + Sbjct: 3 DFFSYFFDHFDQVGSGLWVTVQATVYGALLAFVLSFAFGFMGRSRFAVVR-----TISRV 57 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 I+ F FRGT L +QLF ++Y LP + G ++ +++ +N+ AY SE++R ++ Sbjct: 58 IVEF----FRGTSLYIQLFWLYYALPPLTGYELNALFCGVVAFGINYGAYGSEVVRGALN 113 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P+ Q++A+ A+ L+ Q +R +ILPQ L+S I +LK+T + I+ ++ Sbjct: 114 AVPRAQFEAAVALNLSPFQRMRRVILPQAWVQMIPSLTSLLIMLLKATPLLWLISAADLT 173 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q Q + T + Y L +Y + F Y++ + + + Sbjct: 174 QVVQSMRDRTGATVPAYVTLLVLYFV---FAYVLTLVMNA 210 >gi|330880664|gb|EGH14813.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 201 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 103/187 (55%), Gaps = 1/187 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 ++L++ + ++ + ++ +IG ++ + + L + YV + RGTP+ V + Sbjct: 16 EVLWSGFLTSIQCSALAIAAGTLIGMLAGLV-LTYGGFFARLPIRLYVDLIRGTPVFVLV 74 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +FY +P +G +F A I LTL +++SEI+R ++ +IP GQ +A AIGL Q Sbjct: 75 LAVFYMVPALGWQISAFQAGAIGLTLFCGSHVSEIVRGALQAIPAGQLEAGKAIGLRFNQ 134 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 ++R+++LPQ + + I+K++++ S I + E+ + Q++++ T+ L Y Sbjct: 135 SLRYVLLPQAMRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLF 194 Query: 195 LAFVYLI 201 F++ + Sbjct: 195 AGFLFFL 201 >gi|222085817|ref|YP_002544347.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221723265|gb|ACM26421.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 293 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 71/227 (31%), Positives = 120/227 (52%), Gaps = 26/227 (11%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + +++TL + + V +G +AV+ + ++ + +VW FRG PL+VQ+F F Sbjct: 65 SGVLLTLELMAGAMVFGTALGCVLAVMATS-QNLVLKAMAAVFVWWFRGVPLIVQIFFWF 123 Query: 79 Y---GLPHIGIVFDSF-----------VAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 +P +GI SF +A ++L L+ +A +SEIIR ++S+ +GQ DA Sbjct: 124 NIALFIPQVGI--GSFTISINDLVTPSLAGFLALGLHEAANMSEIIRGGLMSVDRGQRDA 181 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+GL Q +R +ILPQ P ++ I +LK++++ S I + ++ AQ I + Sbjct: 182 AAALGLRPVQRLRAVILPQAARLIIPPTGNQAIGMLKASAIVSVIGMQDLLTQAQAIYAR 241 Query: 185 TYQPLIIYCELAFV----YLILTSFCYIIQIKIESSVTQHTY-SVDK 226 + LII EL FV YL +TS I Q +E S+ + S +K Sbjct: 242 NF--LII--ELLFVASIWYLTITSVASIGQHFLEQSLQPKGHGSANK 284 >gi|82543097|ref|YP_407044.1| glutamate-aspartate transport system permease [Shigella boydii Sb227] gi|187733686|ref|YP_001879337.1| glutamate/aspartate ABC transporter permease GltJ [Shigella boydii CDC 3083-94] gi|81244508|gb|ABB65216.1| glutamate-aspartate transport system permease [Shigella boydii Sb227] gi|187430678|gb|ACD09952.1| glutamate/aspartate ABC transporter, permease protein GltJ [Shigella boydii CDC 3083-94] gi|320185367|gb|EFW60137.1| Glutamate Aspartate transport system permease protein GltJ [Shigella flexneri CDC 796-83] gi|332097750|gb|EGJ02724.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella boydii 3594-74] Length = 246 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 52/214 (24%), Positives = 118/214 (55%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ ++G F ++R + +S + YV +FR PL+VQ F Sbjct: 25 IWSGFQVTIALSICAWIIAFLVGSFFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F + F++ ++ L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 204 YSAHAWESFTAITLAYVLINAIIMLVMTLVERKV 237 >gi|254994369|ref|ZP_05276559.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL J2-064] Length = 235 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 111/218 (50%), Gaps = 18/218 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAV----IRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 A++ T+P+ ++ GF IA+ IR++ + I FYV FR TP ++ + Sbjct: 14 AMLKTIPLTLAMTFFPILFGFIIAIGMTLIRMYHVR-FLEPIAKFYVSFFRSTPAILHIM 72 Query: 76 VIFYGLP----------HIGIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +I+ G+P +GI + + +II+L+ AY++EI+RS II++ GQ Sbjct: 73 LIYLGIPLLVDFLSKSFGLGISANKIPVVIFVIIALSFTAGAYLTEILRSGIIAVDIGQM 132 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+Y++G T Q IR ++LPQ + ++ I L +TS+A+ + +PEI A + Sbjct: 133 EAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVA 192 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 S Y L + A +Y LT I +E + ++ Sbjct: 193 SDNYAFLEAFIGAALIYWFLTILIEAINYILEKNXAKY 230 >gi|329296933|ref|ZP_08254269.1| polar amino acid ABC transporter inner membrane subunit [Plautia stali symbiont] Length = 199 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 85/149 (57%) Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 S + YV + R TP +VQLF I +GLP++ + + A ++++ +N AY +EIIR+ I Sbjct: 31 SRLWGIYVELIRNTPFVVQLFFIVFGLPNLRLKLTAGEAALLAMLINLGAYSTEIIRAGI 90 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +P+GQW+A +GL+R QT ++LP ++ L S+ I ++ +SV S ++ E+ Sbjct: 91 QVMPRGQWEAGRVLGLSRTQTFIRVVLPPSLQRIYPALISQCIIVMLGSSVVSQVSYEEL 150 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 A I S T+ +Y +YL L+ Sbjct: 151 TFAANLIQSRTFLSFEVYLVTTLIYLALS 179 >gi|284032616|ref|YP_003382547.1| polar amino acid ABC transporter inner membrane subunit [Kribbella flavida DSM 17836] gi|283811909|gb|ADB33748.1| polar amino acid ABC transporter, inner membrane subunit [Kribbella flavida DSM 17836] Length = 289 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 3/179 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYV 62 W + + L ++ TL A + V++LI G A RI SD + + F V Sbjct: 49 RWAQFQYTAIQEQLLTGLLNTLRAAGAATVLALIFGAVFAAARI--SDHRWLRVPATFVV 106 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +FR PLL+ +F +YG + F A++ LTL + ++EI R+ I ++PKGQ Sbjct: 107 ELFRAIPLLILMFFFYYGSLEFELGLSPFHAVVFGLTLYNGSVLAEIFRAGIAAVPKGQR 166 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+YA GL + Q +R ++LPQ I + S+ + +LK T++ IT E+ A+++ Sbjct: 167 EAAYATGLRKNQVVRLVLLPQAIRAMLPAIVSQLVVLLKDTALGFIITYNELLYVAKQM 225 >gi|120612709|ref|YP_972387.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax citrulli AAC00-1] gi|120591173|gb|ABM34613.1| amino acid ABC transporter membrane protein 1, PAAT family [Acidovorax citrulli AAC00-1] Length = 243 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q + +A T+ +A ++ VI+L+ G I +R + + + +V +FR PLLVQ+ Sbjct: 23 QWMLSAWGWTVSVALLALVIALVAGSVIGTLRTLPDNRFLVGFGNAWVELFRNIPLLVQI 82 Query: 75 FVIFYGLPHIGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 F+ ++ +P I V S F+ ++++L SA I+E +RS I ++P+GQ A A+G T Sbjct: 83 FLWYHVVPAIFPVMKSVSGFILVVLALGFFTSARIAEQVRSGIQALPRGQRYAGMALGFT 142 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 Q R+++LP PL+SE ++I K++SVA +++ E+ A + T + + I Sbjct: 143 TVQYYRYVLLPMAFRIILPPLTSETMNIFKNSSVAFAVSVTELTMFAMQAQEETSRGIEI 202 Query: 192 YCELAFVYLI 201 Y + +Y++ Sbjct: 203 YLAVTGLYVV 212 >gi|325293282|ref|YP_004279146.1| Inner membrane arginine ABC transporter permease protein [Agrobacterium sp. H13-3] gi|325061135|gb|ADY64826.1| Inner membrane arginine ABC transporter permease protein [Agrobacterium sp. H13-3] Length = 267 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 101/169 (59%), Gaps = 13/169 (7%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ +A + + L+IGF IA + + + L Y IFRG P L+ LF+++Y Sbjct: 52 GVKVTISLALATLPVGLVIGFLIA-LAAQSEEKSLRLAAGVYTTIFRGLPELLTLFIVYY 110 Query: 80 GL--------PHIGIV----FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 G+ ++GI ++FVA +++L++ FS+Y SE++ S+ +IPKGQ++A +A Sbjct: 111 GIQMLLQSAAGYVGITGPVEINAFVAGMVALSVVFSSYSSEVLLSAFKAIPKGQYEAGHA 170 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +GL+R T+ +I+PQ + + +++ ++ +LK TS S I + +I + Sbjct: 171 LGLSRGHTMVLVIIPQLVRIALPGMTNLWVILLKDTSYVSIIGLADIVR 219 >gi|160942992|ref|ZP_02090230.1| hypothetical protein FAEPRAM212_00469 [Faecalibacterium prausnitzii M21/2] gi|158445686|gb|EDP22689.1| hypothetical protein FAEPRAM212_00469 [Faecalibacterium prausnitzii M21/2] Length = 254 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 62/187 (33%), Positives = 96/187 (51%), Gaps = 23/187 (12%) Query: 37 IIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF----VIFYGLPHIGIVFDSFV 92 ++GFF AV ++ Y I RGTP++VQL VIF + +V Sbjct: 84 VLGFFNAVCQV-------------YTTIIRGTPMMVQLLIMSMVIFSNSRNFTMVG---- 126 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 ++L +N AY+SEIIR ++++ GQ +A ++GL T+ II+PQ I L Sbjct: 127 --ALTLGINSGAYVSEIIRGGLMAVDPGQMEAGRSLGLNYMTTMVVIIIPQAIRAVLPAL 184 Query: 153 SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIK 212 +EFI +LK TS+ +TI E+ AQ I++ TY+ + +A +YLIL + K Sbjct: 185 GNEFIVLLKDTSLITTIGGKELLYAAQGIMNRTYEAMFPLLGVALIYLILVMLFTWLLSK 244 Query: 213 IESSVTQ 219 E + Q Sbjct: 245 FERRLAQ 251 >gi|167036207|ref|YP_001671438.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166862695|gb|ABZ01103.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 219 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 103/185 (55%), Gaps = 5/185 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP- 82 TL I+ + + + + G V+ + +++ + Y+ +FR P+LV L+++F+GLP Sbjct: 23 TLAISALGILFATLGGVLYGVLATL-GNRALNIALQVYLELFRAIPVLVWLYLVFFGLPI 81 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + SF ++ L L ++ + E++R ++ S+P+GQ +A +IGL Q +++LP Sbjct: 82 FFALSIPSFWCAVLVLALWGASEVGEVVRGALRSLPRGQREAGLSIGLAGWQLYGYVLLP 141 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + P + + I+K++S+A I + E+ + Q+I+ TY+ ++IY L + I+ Sbjct: 142 QALKRMTPPTINIYTRIIKTSSLAVLIGVVEVIKAGQQIIERTYESVLIYGALFLFFFIV 201 Query: 203 TSFCY 207 CY Sbjct: 202 ---CY 203 >gi|148926601|ref|ZP_01810283.1| putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845295|gb|EDK22389.1| putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 198 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 49/146 (33%), Positives = 88/146 (60%), Gaps = 7/146 (4%) Query: 20 AIVVTLPIACISFVISLI---IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 + TL ++ ++ +I+ I IG +A R II YV +F+ PL++Q+F Sbjct: 47 GFIYTLEVSILALLIATIFGTIGGVMATSRF----KIIRAYTRIYVELFQNVPLVIQIFF 102 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +FY LP +GI D F ++ + AY+SE++RS I+++P+GQ++AS + G T Q + Sbjct: 103 LFYALPVLGIRLDIFTIGVLGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQQM 162 Query: 137 RHIILPQTITTSAVPLSSEFISILKS 162 R+II+PQTI P++++ ++++K Sbjct: 163 RYIIVPQTIRIILPPMTNQMVNLIKK 188 >gi|92112290|ref|YP_572218.1| amino acid ABC transporter permease [Chromohalobacter salexigens DSM 3043] gi|91795380|gb|ABE57519.1| amino acid ABC transporter membrane protein 1, PAAT family [Chromohalobacter salexigens DSM 3043] Length = 213 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 97/175 (55%), Gaps = 1/175 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q+L T+ I+ +S I ++ G IA+IR+ I+ ++ Y+ + R TPL+ Sbjct: 7 QMLLEGAWTTVWISAVSIAIGVVAGLVIALIRLA-RIPIVDQLLVLYISVARATPLVTLA 65 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF P +G+ + VA I++LTLN +A+ +EI RS+ + + Q +A+ A G+T Sbjct: 66 LFIFLSAPDLGLDLNRSVAGILALTLNTTAFNAEIWRSAFRNFSRDQREAAMATGMTPWI 125 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 T R I+LPQ + TS L +E ++K + + I I ++ + RI + TY+PL Sbjct: 126 TFRRIMLPQMVITSLPGLVNEMSFLIKGSPAIAVIGIVDLTRVTNRISAVTYEPL 180 >gi|213970849|ref|ZP_03398972.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301384515|ref|ZP_07232933.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302060677|ref|ZP_07252218.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302130492|ref|ZP_07256482.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924372|gb|EEB57944.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 248 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 99/170 (58%), Gaps = 15/170 (8%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ IA ++++I+LI+G + V+R S ++S I YV IFR PLLVQLF+ ++ +P Sbjct: 32 TIAIAVVAWIIALILGSVLGVMRTVPSR-LVSGISTAYVEIFRNVPLLVQLFIWYFLVPD 90 Query: 84 I-------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + +F+++++ L L +A + E +R+ I ++PKGQ A+ A+G Sbjct: 91 LLPADLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGF 150 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 Q +++LPQ PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 151 KLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|71064874|ref|YP_263601.1| ABC basic amino acid transporter, inner membrane subunit [Psychrobacter arcticus 273-4] gi|71037859|gb|AAZ18167.1| ABC basic amino acid transporter, inner membrane subunit [Psychrobacter arcticus 273-4] Length = 244 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 15/207 (7%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGT 68 + F LL + VT+ +A S +I +++G A ++ S+ ++ I Y RG Sbjct: 4 LQGFGALLLSGATVTIQLAVTSLIIGMVLGLLGATAKL--SNIWLLRKIATVYTATMRGI 61 Query: 69 PLLVQLFVIFYG--------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 P L+ + I+YG L G + +F +++L++ F AY +EI R SI Sbjct: 62 PELLLVLFIYYGGSILLMSILKKFGYNDYVEISAFWGGVMALSIAFGAYATEIFRMSIQE 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP GQ +A+ AIG+ QT I LPQ + L + F+ +LK T++ S + + +I Sbjct: 122 IPIGQQEAAQAIGMRPFQTFYRITLPQVWQIALPGLGNLFLVLLKDTALVSVVGLKDIMY 181 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 + R +T QP Y A +YL LT Sbjct: 182 QSSRAAQSTQQPFTFYMAAAIIYLGLT 208 >gi|312142892|ref|YP_003994338.1| polar amino acid ABC transporter, inner membrane subunit [Halanaerobium sp. 'sapolanicus'] gi|311903543|gb|ADQ13984.1| polar amino acid ABC transporter, inner membrane subunit [Halanaerobium sp. 'sapolanicus'] Length = 229 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/197 (32%), Positives = 110/197 (55%), Gaps = 2/197 (1%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 LI + P LL VVT+ + S ++ ++IG +A +++ + I++ Y I R Sbjct: 7 LIQRALPFLLRGT-VVTIQLTFWSLLLGVVIGLPLAFAQVY-GNKIVTFFTAIYERIARS 64 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PLLV L +I Y LP +G F A ++ + L SAY S+I R +I S+ Q A+ + Sbjct: 65 IPLLVILLLINYALPMLGFRIPVFRAAVLGIGLRSSAYQSQIYRGAIQSVSGSQLKAAMS 124 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G+ + HII PQ I + P+++E +LK TS+A TI + E+ + ++T+ + Sbjct: 125 LGMNKLTAFSHIIAPQAIRIAIPPVTNESAIVLKDTSLAFTIGVVELVRQGDYFIATSNE 184 Query: 188 PLIIYCELAFVYLILTS 204 P++IY +A +Y ILT+ Sbjct: 185 PMVIYLTVAAIYFILTT 201 >gi|309812123|ref|ZP_07705881.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185] gi|308433810|gb|EFP57684.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185] Length = 310 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 112/210 (53%), Gaps = 26/210 (12%) Query: 3 YEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++W F L + ++ +L + T+ + +S ++ +++G +A++R+ + ++ + Y Sbjct: 47 WDWPFVLKVMNYSPVLDGLLKGTIIVTIVSMILGVVLGVILAIMRLS-DNPVLRGVAFVY 105 Query: 62 VWIFRGTPLLVQLFVIFYGL----P--HIGIVFDSFVAI-----------------IISL 98 +W FR P V + ++ G+ P +G+ F + + II L Sbjct: 106 IWFFRAVPRYVLMTILGLGVLTLYPTLDLGVPFGKDLGLTFYTLDVKTISSGITVGIIGL 165 Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158 L+ +AY++EI R+ I+S+ GQ +A+ A+G++ + +R IILPQ + P +E IS Sbjct: 166 GLSEAAYMAEIARAGILSVDNGQREAAQALGMSNGKAMRRIILPQAMRVIVPPTGNEAIS 225 Query: 159 ILKSTSVASTITI-PEIFQTAQRIVSTTYQ 187 ++K TS+ + + + E+F AQ + + TY+ Sbjct: 226 MVKDTSLLTAVPVTAELFNQAQNVANNTYK 255 >gi|307131835|ref|YP_003883851.1| histidine/lysine/arginine/ornithine ABC transporter membrane protein [Dickeya dadantii 3937] gi|306529364|gb|ADM99294.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Dickeya dadantii 3937] Length = 229 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + +L+ +TL +A S V++L+IG A ++ S+ ++S Y + RG P L Sbjct: 4 GYSELIMDGTRMTLQLALCSLVLALLIGLVGAAAKLS-SNRLLSGCFSGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLPHI-----------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL + I D A II+L + AY +E R + +++P+G Sbjct: 63 VLMLLIFYGLQMVLNSLTETLGLDQIDIDPLAAGIITLGFIYGAYFTETFRGAYLAVPRG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A G T + R I+ P + + + + + ILKST++ S + + ++ +T Q Sbjct: 123 QIEAAVAFGFTPMKVFRRIMFPSMMRFALPGIGNNWQVILKSTALVSLLGLSDVIKTTQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 T+ P +YLI T+ + +E +Q V+ Sbjct: 183 AGKGTHHPFFFAIVAGVLYLIFTTLSNGVLWWLEKRYSQGVRKVN 227 >gi|294674316|ref|YP_003574932.1| amino acid ABC transporter ATP-binding protein/permease [Prevotella ruminicola 23] gi|294473716|gb|ADE83105.1| amino acid ABC transporter, ATP-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Prevotella ruminicola 23] Length = 911 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 10/201 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 NLI ++ Q++ + VTL I + ++ ++G + +R+ + I Y+ + R Sbjct: 19 NLIAENRYQMILDGLQVTLIITLCATILGTLLGGLVCWMRMN-RHKWLRHIASAYIDLMR 77 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GTP+LV L +++Y L I V I++ LN +AYISE++R+SI I +GQ +A Sbjct: 78 GTPVLVLLMLMYYVL-MAPIDATGIVVAIVTFALNTAAYISEMLRTSIQGIDRGQTEAGL 136 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G T++QT IILPQ + E IS+LK TS+ I + ++ + + I S T+ Sbjct: 137 ALGYTQRQTFIRIILPQVVKAVMPVYQGEVISLLKGTSIVGYIAVNDMTRASDLIRSRTF 196 Query: 187 QPLIIYCELAFVYLILTSFCY 207 AF LI+T+ Y Sbjct: 197 D--------AFFPLIVTAIIY 209 >gi|16764980|ref|NP_460595.1| ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161613901|ref|YP_001587866.1| hypothetical protein SPAB_01639 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167992812|ref|ZP_02573908.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168241191|ref|ZP_02666123.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168260167|ref|ZP_02682140.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168462913|ref|ZP_02696844.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194446763|ref|YP_002040884.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448646|ref|YP_002045676.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197263771|ref|ZP_03163845.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198243706|ref|YP_002215512.1| putative ABC transporter membrane component [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390145|ref|ZP_03216756.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|16420162|gb|AAL20554.1| putative ABC-type transport system probable membrane spanning protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161363265|gb|ABX67033.1| hypothetical protein SPAB_01639 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194405426|gb|ACF65648.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406950|gb|ACF67169.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|195634262|gb|EDX52614.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197242026|gb|EDY24646.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197938222|gb|ACH75555.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602590|gb|EDZ01136.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205329069|gb|EDZ15833.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205339633|gb|EDZ26397.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205350636|gb|EDZ37267.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261246829|emb|CBG24643.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993566|gb|ACY88451.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158164|emb|CBW17661.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912624|dbj|BAJ36598.1| putative ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|323129905|gb|ADX17335.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326623258|gb|EGE29603.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627747|gb|EGE34090.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332988523|gb|AEF07506.1| putative ABC-type transport system membrane component [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 226 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 8/219 (3%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---DTIISLIMHFY 61 +FN + + P +V + C +I I GF +I F S ++ I Y Sbjct: 8 FFNDLTEQLP-----LVVDGIKETCKLALIVSITGFLWGIIIFFLSLSHRPVVKAITRLY 62 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + F GTPL++ LFVI+YGLP GI SF + TLN AY + + ++ ++ K + Sbjct: 63 MDFFIGTPLILILFVIYYGLPQSGIHLSSFTVAVTGFTLNVGAYNAAYMTTAYNALNKYE 122 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ GL ++Q IILPQ + +S L+++ I+ LK +++ I E F Q + Sbjct: 123 TEAAVVQGLNKRQVFLWIILPQVLLSSIPALTNQVINNLKDSTIVFLIQYTEFFARIQEV 182 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +T+++ Y A VYLI +F + +E + +H Sbjct: 183 AATSFKFFHAYLFAAIVYLIGVTFIVGLTRFLEHRLLRH 221 >gi|74311190|ref|YP_309609.1| glutamate/aspartate transport system permease [Shigella sonnei Ss046] gi|170681365|ref|YP_001742771.1| glutamate/aspartate ABC transporter permease GltJ [Escherichia coli SMS-3-5] gi|193063371|ref|ZP_03044461.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli E22] gi|193069039|ref|ZP_03049997.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli E110019] gi|194429737|ref|ZP_03062253.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli B171] gi|218553196|ref|YP_002386109.1| glutamate and aspartate ABC transporter membrane protein [Escherichia coli IAI1] gi|218694094|ref|YP_002401761.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|256020606|ref|ZP_05434471.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily protein [Shigella sp. D9] gi|260842880|ref|YP_003220658.1| glutamate/aspartate transport system permease GltJ [Escherichia coli O103:H2 str. 12009] gi|260853905|ref|YP_003227796.1| glutamate/aspartate transport system permease GltJ [Escherichia coli O26:H11 str. 11368] gi|260866802|ref|YP_003233204.1| glutamate/aspartate transport system permease GltJ [Escherichia coli O111:H- str. 11128] gi|293413950|ref|ZP_06656599.1| glutamate/aspartate transport system permease gltJ [Escherichia coli B185] gi|293418766|ref|ZP_06661201.1| glutamate/aspartate transport system permease gltJ [Escherichia coli B088] gi|300817826|ref|ZP_07098040.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300823029|ref|ZP_07103163.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|307312630|ref|ZP_07592262.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|331667008|ref|ZP_08367882.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli TA271] gi|331676314|ref|ZP_08377026.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli H591] gi|332281795|ref|ZP_08394208.1| glutamate/aspartate transport system permease [Shigella sp. D9] gi|73854667|gb|AAZ87374.1| glutamate/aspartate transport system permease [Shigella sonnei Ss046] gi|170519083|gb|ACB17261.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli SMS-3-5] gi|192930955|gb|EDV83559.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli E22] gi|192957583|gb|EDV88028.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli E110019] gi|194412218|gb|EDX28524.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli B171] gi|218350826|emb|CAU96520.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|218359964|emb|CAQ97508.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI1] gi|257752554|dbj|BAI24056.1| glutamate/aspartate transport system permease GltJ [Escherichia coli O26:H11 str. 11368] gi|257758027|dbj|BAI29524.1| glutamate/aspartate transport system permease GltJ [Escherichia coli O103:H2 str. 12009] gi|257763158|dbj|BAI34653.1| glutamate/aspartate transport system permease GltJ [Escherichia coli O111:H- str. 11128] gi|291325294|gb|EFE64709.1| glutamate/aspartate transport system permease gltJ [Escherichia coli B088] gi|291434008|gb|EFF06981.1| glutamate/aspartate transport system permease gltJ [Escherichia coli B185] gi|300524378|gb|EFK45447.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|300529523|gb|EFK50585.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|306907332|gb|EFN37837.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|315059909|gb|ADT74236.1| glutamate and aspartate transporter subunit [Escherichia coli W] gi|320198221|gb|EFW72825.1| Glutamate Aspartate transport system permease protein GltJ [Escherichia coli EC4100B] gi|323153621|gb|EFZ39869.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli EPECa14] gi|323158892|gb|EFZ44903.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli E128010] gi|323179869|gb|EFZ65426.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli 1180] gi|323184991|gb|EFZ70358.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli 1357] gi|323379527|gb|ADX51795.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli KO11] gi|323945129|gb|EGB41191.1| inner membrane transport system [Escherichia coli H120] gi|324116728|gb|EGC10643.1| inner membrane transport system [Escherichia coli E1167] gi|331066232|gb|EGI38116.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli TA271] gi|331076372|gb|EGI47654.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli H591] gi|332104147|gb|EGJ07493.1| glutamate/aspartate transport system permease [Shigella sp. D9] gi|332342002|gb|AEE55336.1| glutamate/aspartate transport system permease GltJ [Escherichia coli UMNK88] Length = 246 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 52/214 (24%), Positives = 118/214 (55%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ ++G F ++R + +S + YV +FR PL+VQ F Sbjct: 25 IWSGFQVTIALSICAWIIAFLVGSFFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F + F++ ++ L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 204 YSAHAWESFTAITLAYVLINAVIMLVMTLVERKV 237 >gi|226324098|ref|ZP_03799616.1| hypothetical protein COPCOM_01876 [Coprococcus comes ATCC 27758] gi|225207647|gb|EEG90001.1| hypothetical protein COPCOM_01876 [Coprococcus comes ATCC 27758] Length = 247 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 96/164 (58%), Gaps = 13/164 (7%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI--------GIVFD-SFVAIII----SLT 99 ++ ++ Y+ + RGTP+LVQL+V ++G+P + G ++ + VA I+ +L Sbjct: 52 VLKQLVSIYISVIRGTPILVQLYVTYFGIPMLLKYINFKCGTNYNVNGVAPIVYAFVALA 111 Query: 100 LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISI 159 LN SA+ +EIIR+S+ S+ KGQ +A+ A+G+ Q + IILP+ I + L + FI + Sbjct: 112 LNESAFNAEIIRASLESVDKGQVEAASALGMNYFQALIRIILPEAIVVALPSLGNAFIGL 171 Query: 160 LKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +K TS+A ++ E+ + + Y+ +Y LA +Y ++T Sbjct: 172 IKGTSLAFVCSVVEMTAEGKILAGRNYRYFEVYISLAIIYWVIT 215 >gi|86151590|ref|ZP_01069804.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 260.94] gi|121612476|ref|YP_001000174.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter jejuni subsp. jejuni 81-176] gi|167005132|ref|ZP_02270890.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 81-176] gi|85841219|gb|EAQ58467.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 260.94] gi|87250268|gb|EAQ73226.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 81-176] Length = 233 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 20/200 (10%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I+ P L AA +T+ ++ + SLIIG F ++ +F I+ I Y+ Sbjct: 3 FDFILVQAPAFLTAA-WLTIKLSFFGIIFSLIIGLF-CILMSYFKIKILENICKLYIEFS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD------------------SFVAIIISLTLNFSAYIS 107 R TPLL+QLF ++Y LP I + SF I L+ +Y++ Sbjct: 61 RNTPLLIQLFFLYYALPKFNIHLEQIPPLDLICLSVEETLRPSFACAIAGLSFLGGSYMA 120 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E +R+ +I K Q++A ++G ++ +R++ILPQ + S +S+ I ++K TSV S Sbjct: 121 ESLRAGFEAIRKQQFEAGLSLGFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVS 180 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I +P++ + + S TY+ Sbjct: 181 IIALPDLVNLMKSLNSLTYK 200 >gi|296111216|ref|YP_003621598.1| glutamine ABC transporter, substrate binding and permease protein [Leuconostoc kimchii IMSNU 11154] gi|295832748|gb|ADG40629.1| glutamine ABC transporter, substrate binding and permease protein [Leuconostoc kimchii IMSNU 11154] Length = 477 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 104/196 (53%), Gaps = 4/196 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIFRG 67 I+ S L + T+ + I+ V++ + G + V+ I S+ + I +++FRG Sbjct: 268 ILKSNQNALLKGLWQTIKLTIIAIVLASVWGILLGVLGI--SEFKWVRGISTTVIYLFRG 325 Query: 68 TPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PL+V F I+ GLP + GI +F A II+L LN AY +R ++ +GQ +A+ Sbjct: 326 LPLMVLAFFIYIGLPGVTGIKIPAFTAGIITLILNEGAYTGAFVRGGFEAVDRGQMEAAR 385 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL +R +I+PQ + ++FI LK TS+ S I + E+ QT IV+ Sbjct: 386 SLGLPYGHAMRKVIMPQGLRIMVPSFINQFIITLKDTSILSAIGLLELTQTGTLIVARNS 445 Query: 187 QPLIIYCELAFVYLIL 202 Q ++ +A +YL++ Sbjct: 446 QGFRVWAIIAIMYLVV 461 >gi|149202380|ref|ZP_01879353.1| polar amino acid uptake family ABC transporter, permease protein [Roseovarius sp. TM1035] gi|149144478|gb|EDM32509.1| polar amino acid uptake family ABC transporter, permease protein [Roseovarius sp. TM1035] Length = 275 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 25/176 (14%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI----------------IISLTLNFSAYIS 107 I RGTPLL+Q+++++YGL G +F + I +++LTL+++ Y Sbjct: 102 IIRGTPLLLQIWLLYYGL---GSLFPQYPWIRGSELWPYLRQAWPYAVLALTLSYAGYEG 158 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E++R S+ KGQ +A+ A G+ R R I LPQ I L E I LK+T + + Sbjct: 159 EVMRGGFASVQKGQLEAARAFGMPRFTIFRRIWLPQAIRNVLPTLGGETILQLKATPLVA 218 Query: 168 TITIPEIFQTAQRIVSTT---YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TIT+ EI+ + R+ + T Y+PL++ LA VY+I+ ++ IE+ V Sbjct: 219 TITVIEIYSVSSRVRADTFIVYEPLLL---LALVYMIIAGLIALMFRWIENRVPSR 271 >gi|119866937|ref|YP_936889.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium sp. KMS] gi|119693026|gb|ABL90099.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Mycobacterium sp. KMS] Length = 533 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 119/216 (55%), Gaps = 12/216 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGT 68 + P+L+ ++ L IA +S +I+ G +A+I SD+ + L + Y+W+ RGT Sbjct: 10 TLPELIDGGLLA-LRIALLSLIIAWPAGLLLALI----SDSRWFLPRLAVGVYIWVLRGT 64 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P+L+QL ++ LP G S ++ L LN +A+ +EI R + ++ Q DA+ +I Sbjct: 65 PILLQLIFLYNVLPQWGWQLSSETTAVLGLALNAAAFAAEIFRGGLNAVNVSQIDAARSI 124 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+ T+ I LPQ + L+SE I +K+TS+AS I + E+ +Q++VS ++ Sbjct: 125 GLSPALTLLRIRLPQALRVITPALASEAIMTVKNTSLASAIAVAELTLRSQQLVSINFEY 184 Query: 189 LIIYCELAFVYLILTSFCYIIQ----IKIESSVTQH 220 L ++ A +YL L + ++Q ++++ +H Sbjct: 185 LPVFGAAAAIYLALNTILMVVQYLSERRLDNDRQRH 220 >gi|62180201|ref|YP_216618.1| putative ABC-type transport system membrane spanning protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127834|gb|AAX65537.1| putative ABC-type transport system probable membrane spanning protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322714674|gb|EFZ06245.1| putative ABC-type transport system membrane spanning protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 226 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 111/224 (49%), Gaps = 9/224 (4%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---DTIISLIMHFY 61 +FN + + P +V + C +I I GF +I F S ++ I Y Sbjct: 8 FFNDLTEQLP-----LVVDGIKETCKLALIVSITGFLWGIIIFFLSLSHRPVVKAITRLY 62 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + F GTPL++ LFVI+YGLP GI SF + TLN AY + + ++ ++ K + Sbjct: 63 MDFFIGTPLILILFVIYYGLPQSGIHLSSFTVAVTGFTLNVGAYNAAYMTTAYNALNKYE 122 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ GL ++Q IILPQ + +S L+++ I+ LK +++ I E F Q + Sbjct: 123 TEAAVVQGLNKRQIFLWIILPQVLLSSIPALTNQVINNLKDSTIVFLIQYTEFFARIQEV 182 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T+++ Y A VYLI +F + +E + +H Y D Sbjct: 183 AATSFKFFHAYLFAAIVYLIGVTFIVGLTRFLEHRLLRH-YGQD 225 >gi|93005159|ref|YP_579596.1| amino acid ABC transporter permease [Psychrobacter cryohalolentis K5] gi|92392837|gb|ABE74112.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Psychrobacter cryohalolentis K5] Length = 244 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 15/207 (7%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGT 68 + F LL + VT+ +A S +I +++G A ++ S+ ++ I Y RG Sbjct: 4 LQGFGALLLSGATVTIQLAMTSLIIGMVLGLLGATAKL--SNIWLLRKIATVYTATMRGI 61 Query: 69 PLLVQLFVIFYG--------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 P L+ + I+YG L G + +F +++L++ F AY +EI R SI Sbjct: 62 PELLLVLFIYYGGSILLMSILKKFGYNDYVEISAFWGGVMALSIAFGAYATEIFRMSIQE 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP GQ +A+ AIG+ QT I LPQ + L + F+ +LK T++ S + + +I Sbjct: 122 IPIGQREAAQAIGMRPFQTFYRITLPQVWQIALPGLGNLFLVLLKDTALVSVVGLKDIMY 181 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 + R +T QP Y A +YL LT Sbjct: 182 QSSRAAQSTQQPFTFYMAAAIIYLGLT 208 >gi|313673709|ref|YP_004051820.1| polar amino acid abc transporter, inner membrane subunit [Calditerrivibrio nitroreducens DSM 19672] gi|312940465|gb|ADR19657.1| polar amino acid ABC transporter, inner membrane subunit [Calditerrivibrio nitroreducens DSM 19672] Length = 259 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 63/187 (33%), Positives = 107/187 (57%), Gaps = 10/187 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWIFRGTPLLVQL 74 L ++ T+ I+ IS + + IG +A + F+S I I Y+ R TPL+ Q+ Sbjct: 56 LIKGLMATIEISFISIFLGIGIGIVVAFGSLSPFYS---IKTICKIYILTIRNTPLMTQI 112 Query: 75 FVIFYGLPHIGIVF--DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 + ++ +G +F + F + +L+L +YISEI+R SI+SI K QW + YA+G++R Sbjct: 113 LINYF---VVGNIFHINGFWVAVFTLSLFEGSYISEIVRGSILSIDKQQWLSGYALGMSR 169 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 Q ++ +ILPQ+ LS+ +S +K +S+ S I+I E+ AQ+ VS T+ I+ Sbjct: 170 IQVLKKVILPQSYPIIIPSLSNILVSTVKDSSLLSIISIYELTFEAQKAVSETFMTFEIW 229 Query: 193 CELAFVY 199 +AF+Y Sbjct: 230 FMVAFLY 236 >gi|317048960|ref|YP_004116608.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316950577|gb|ADU70052.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 228 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 12/206 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + ++ +VTL +A S V+++++G A ++ S + +++ Y + RG P L Sbjct: 4 GYSDVILKGTLVTLELALSSVVLAVVLGLIGAGAKLSRSRPL-AMLFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G+ D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNALTDALGVAQFDIDPMVAGIITLGFIYGAYFTETFRGAFLAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A G T QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 QIEAATAFGFTGSQTFRRILFPAMMRFALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFC 206 +T+QP +YL+ T+ Sbjct: 183 AGKSTWQPFYFAIVAGVIYLVFTTLS 208 >gi|257469870|ref|ZP_05633962.1| amino acid ABC transporter permease [Fusobacterium ulcerans ATCC 49185] gi|317064099|ref|ZP_07928584.1| amino acid transport system permease [Fusobacterium ulcerans ATCC 49185] gi|313689775|gb|EFS26610.1| amino acid transport system permease [Fusobacterium ulcerans ATCC 49185] Length = 236 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 54/146 (36%), Positives = 87/146 (59%), Gaps = 3/146 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLT--LNFSAYISEIIRSSIISIP 118 YV + RGTP +VQL +I L +G + D+ + +I L+ +N AY++EIIR+ I + Sbjct: 75 YVDLIRGTPAVVQL-MILANLIFVGALRDTPILVIAGLSFGINSGAYVAEIIRAGIEGLD 133 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A+ A+G+ ++ II+PQ I L SEFI++LK TS+ I ++ ++A Sbjct: 134 KGQMEAARALGMPYGIAMKEIIIPQAIKKILPALVSEFITLLKETSIVGFIGGVDLLRSA 193 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTS 204 I S TY+ + + +YLILT+ Sbjct: 194 NIITSQTYRGVEPLLAVGLIYLILTA 219 >gi|260881811|ref|ZP_05405274.2| L-cystine ABC transporter, permease protein [Mitsuokella multacida DSM 20544] gi|260847944|gb|EEX67951.1| L-cystine ABC transporter, permease protein [Mitsuokella multacida DSM 20544] Length = 239 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 55/160 (34%), Positives = 92/160 (57%), Gaps = 15/160 (9%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLP------------HIGIVFDSFVAI-IISLTL 100 + + YV++ R P +V L++++YG+P H+ I +A+ II LTL Sbjct: 55 LGKLFRLYVYVCRSIPNMVLLYLVYYGMPLAFLALRGKTGIHVPIEHVPAMAVAIIGLTL 114 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL-SSEFISI 159 + AY+SEI R+++ S+P+GQ++A+ A+G+T Q R +I PQ I A+PL +++F+S Sbjct: 115 HTGAYLSEIFRAALDSVPQGQFEAAEAMGMTSFQMYRRVIFPQAIVF-ALPLFANQFLST 173 Query: 160 LKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +KSTS+ IT+ E+F A+ Q Y A +Y Sbjct: 174 MKSTSIVFVITVIEVFGAAKLFCEDNSQYFEAYIVAALLY 213 >gi|205352680|ref|YP_002226481.1| amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272461|emb|CAR37350.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] Length = 226 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 8/219 (3%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---DTIISLIMHFY 61 +FN + + P +V + C +I I GF +I F S ++ I Y Sbjct: 8 FFNDLTEQLP-----LVVDGIKETCKLALIVSITGFLWGIIIFFLSLSHRPVVKAITRLY 62 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + F GTPL++ LFVI+YGLP GI SF + TLN AY + + ++ ++ K + Sbjct: 63 MDFFIGTPLILILFVIYYGLPQSGIHLSSFTVAVTGFTLNVGAYNAAYMTTAYNALNKYE 122 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ GL ++Q IILPQ + +S L+++ I+ LK +++ I E F Q + Sbjct: 123 TEATVVQGLNKRQVFLWIILPQVLLSSIPALTNQVINNLKDSTIVFLIQYTEFFARIQEV 182 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +T+++ Y A VYLI +F + +E + +H Sbjct: 183 AATSFKFFHAYLFAAIVYLIGVTFIVGLTRFLEHRLLRH 221 >gi|329937973|ref|ZP_08287455.1| amino acid ABC transporter transmembrane protein [Streptomyces griseoaurantiacus M045] gi|329302930|gb|EGG46819.1| amino acid ABC transporter transmembrane protein [Streptomyces griseoaurantiacus M045] Length = 216 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 57/190 (30%), Positives = 98/190 (51%), Gaps = 9/190 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI---ISLI 57 MK++W + D P + ++VTL + +IS +G A++ + + + ++ Sbjct: 1 MKWDW-GAVADFMPHF-WDGLLVTLQALALGSLISFALGLVWALLMRTPTRWVRWPVGVV 58 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 F R TPLLVQLF +FY LP I F + + ++ L++S Y ++ R+ I ++ Sbjct: 59 TEF----IRNTPLLVQLFFLFYVLPEWNITFSALTTGVFAIGLHYSTYTMQVYRAGIEAV 114 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQW+A+ A+ L ++T +ILPQ I L + IS+LK T + IT+ E+ Sbjct: 115 PVGQWEAATALNLPLRRTWTAVILPQAIRRVVPALGNYVISMLKDTPLLMAITVLEMLGQ 174 Query: 178 AQRIVSTTYQ 187 A+ +Q Sbjct: 175 ARLFSQEHFQ 184 >gi|213859807|ref|ZP_03385511.1| histidine transport system permease [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 180 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 93/170 (54%), Gaps = 10/170 (5%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSS 113 IFRGTPL VQL V + G+ + IV ++F +++LTLN AY +EI + Sbjct: 10 IFRGTPLYVQLLVFYSGMYTLEIVKGTDLLNAFFRSGLNCTVLALTLNTCAYTTEIFAGA 69 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I S+P G+ +A+ A G + + R IILP + + S+E I +L ST++A T T+P+ Sbjct: 70 IRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPD 129 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + + A+ I S TYQP + A +YL+++ + + E QH S Sbjct: 130 LLKIARDINSATYQPFTAFGIAAVLYLLISYVLISLFRRAERRWLQHVSS 179 >gi|163853361|ref|YP_001641404.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium extorquens PA1] gi|218532218|ref|YP_002423034.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium chloromethanicum CM4] gi|163664966|gb|ABY32333.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium extorquens PA1] gi|218524521|gb|ACK85106.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium chloromethanicum CM4] Length = 240 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 19/221 (8%) Query: 1 MKYEW-FNLIIDSFPQ-------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT 52 M Y W + + ++ P+ +L + + T+ A S+ I+ +G + V+R S T Sbjct: 1 MNYTWNWGIFLEPSPEGAGTYADMLLSGLAWTVVTALCSWAIAFTLGSVVGVMRTLPSRT 60 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLP-----HIGIVFDS-----FVAIIISLTLNF 102 + I YV FR PLLVQ+F+ ++ LP +G F ++ L Sbjct: 61 A-NAIGAAYVEGFRNVPLLVQMFLWYFVLPELLPARLGSAVKQMPDAPFYTAVLCLGFFT 119 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +A ++E +R+ I ++P+GQ A A+GLT QT R ++LP PL+SEF++ LK+ Sbjct: 120 AARVAEQVRAGIRALPRGQAQAGLALGLTWAQTYRAVLLPNAYRIILPPLTSEFLNNLKN 179 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 TSVA TI + E+ A+ + ++Q + +Y+ L Sbjct: 180 TSVALTIGLLELTARARSMQEFSFQVFEAFTAATLLYVALN 220 >gi|238786078|ref|ZP_04630036.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia bercovieri ATCC 43970] gi|238795398|ref|ZP_04638913.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia mollaretii ATCC 43969] gi|238713017|gb|EEQ05071.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia bercovieri ATCC 43970] gi|238720517|gb|EEQ12318.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia mollaretii ATCC 43969] Length = 246 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 115/214 (53%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ ++VI+ IG ++R + I+S I YV +FR PL+VQ F Sbjct: 25 IWSGFQVTIALSLCAWVIAFFIGSLFGILRTV-PNRILSGIGTCYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F S F++ +I L L +A + E +R+ I S+P+GQ Sbjct: 84 WYLVVPELLPVDIGMWFKSELDPNIQFFLSSVICLGLFTAARVCEQVRAGIQSLPRGQKA 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIIPPMTSEMVNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 204 YSAHAYESFTAITLGYVLINAVIMLVMRLVEKKV 237 >gi|295095777|emb|CBK84867.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 308 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 76/238 (31%), Positives = 125/238 (52%), Gaps = 22/238 (9%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++EW F ++ + TL + IS V+S++IG +A+ R+ S + SL Y Sbjct: 40 RWEWAVFARWFFDPVILEGVGQTLLLTLISTVLSVVIGGILALARLSSSWLLSSLAWG-Y 98 Query: 62 VWIFRGTPLLVQLFVIFY----------GLPHIGIVFDSFVAI---------IISLTLNF 102 +W+FR PL+V L +++ G+P GI + SF I I+ LTL Sbjct: 99 IWLFRSLPLIVVLIILYNFSYLYDTLSLGVPFTGITWGSFETINVLGQFSTAIVGLTLVQ 158 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTR-KQTIRHIILPQTITTSAVPLSSEFISILK 161 SAY +EIIR + + GQ++A+ A+GL ++T+R IILPQ + T +E IS+ K Sbjct: 159 SAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTVR-IILPQALRTILPSGFNEIISLAK 217 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ + +PE+F T Q I + T + + + A YL++T+ IQ IE + + Sbjct: 218 GTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAVWYLVITTVLSAIQHVIERGLAR 275 >gi|238759569|ref|ZP_04620731.1| Binding-protein-dependent transport system inner membrane component [Yersinia aldovae ATCC 35236] gi|238702228|gb|EEP94783.1| Binding-protein-dependent transport system inner membrane component [Yersinia aldovae ATCC 35236] Length = 245 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 106/200 (53%), Gaps = 23/200 (11%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ + L+ ++TL I+ + V S ++GF +A R + + L + + +FR Sbjct: 10 LLAPQYLGWLWHGFLLTLWISACTVVASTLLGFLLAAARDSELNGLQWLAIGYST-LFRN 68 Query: 68 TPLLVQLFVIFYGL--------------PH--------IGIVFDSFVAIIISLTLNFSAY 105 TPLL+QLF ++ PH +G F+A I LT +A+ Sbjct: 69 TPLLIQLFFWYFAASQLLPASWIPWLNTPHEITFFGLTLGWPSFEFLAGFIGLTCYSTAF 128 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 I+E +R+ I + KGQ A++A+GLT Q +RH++LPQ + + PL ++++I+K++S+ Sbjct: 129 IAEELRAGISGVAKGQKYAAHALGLTGWQAMRHVVLPQALKIAMPPLLGQYMNIIKNSSL 188 Query: 166 ASTITIPEIFQTAQRIVSTT 185 A I + E+ ++++ + T Sbjct: 189 AMAIGVAELSYASRQVETET 208 >gi|146280413|ref|YP_001170566.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] gi|145568618|gb|ABP77724.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] Length = 234 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 90/161 (55%), Gaps = 2/161 (1%) Query: 61 YVWIFRGTPLLVQLFVIFY--GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV +FRG+ LLVQLF +++ LP + +F ++ L LN AY +E++R +I S+ Sbjct: 66 YVEVFRGSSLLVQLFWLYFVLPLPPFNVEMSAFAVAVVGLGLNIGAYGAEVLRGAIRSVH 125 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A +A+ +T +R IILPQ + + P ++ I +LK+TS+ S IT+ ++ A Sbjct: 126 RGQHEACHALNMTPLTRMRRIILPQALLAAIPPGTNLLIELLKNTSLVSLITLSDLAFRA 185 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 +++ T L I+ +Y +L ++E + + Sbjct: 186 RQLDQATLMTLEIFGLALVIYFVLAQTINFAMRRLEQRLAR 226 >gi|239941505|ref|ZP_04693442.1| putative amino acid ABC transporter permease protein [Streptomyces roseosporus NRRL 15998] gi|239987969|ref|ZP_04708633.1| putative amino acid ABC transporter permease protein [Streptomyces roseosporus NRRL 11379] gi|291444949|ref|ZP_06584339.1| ectoine/hydroxyectoine ABC transporter [Streptomyces roseosporus NRRL 15998] gi|291347896|gb|EFE74800.1| ectoine/hydroxyectoine ABC transporter [Streptomyces roseosporus NRRL 15998] Length = 243 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/221 (23%), Positives = 117/221 (52%), Gaps = 9/221 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHF 60 ++F+L+++ P++ + + VTL + +++ ++ F + ++ R+ + +++ F Sbjct: 3 DFFSLLVEELPRV-RSGLWVTLQATVLGALLAGVLAFALGLMAGSRLLLARGFSRVVVEF 61 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FRGT L VQLF +Y +P + G + + +++ LNF AY +E++R +I S+P+ Sbjct: 62 ----FRGTSLYVQLFWFYYAMPLLTGYEMEPLICGVVAFGLNFGAYGAEVVRGAINSVPR 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ A+ L+ + + +ILPQ ++ I +LK+T + ++ ++ Q Sbjct: 118 GQYEAAIALNLSPTRRLWKVILPQAWVQMIPSFTNLLIQLLKATPLLWLLSAADLMTVVQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ T + + Y L VY +L ++ +E S + Sbjct: 178 QLRDRTGETVTAYLTLLAVYFVLAYALTMLMNLLERSAKRR 218 >gi|126433483|ref|YP_001069174.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium sp. JLS] gi|126233283|gb|ABN96683.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Mycobacterium sp. JLS] Length = 533 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 119/216 (55%), Gaps = 12/216 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGT 68 + P+L+ ++ L IA +S +I+ G +A+I SD+ + L + Y+W+ RGT Sbjct: 10 TLPELIDGGLLA-LRIALLSLIIAWPAGLLLALI----SDSRWFLPRLAVGVYIWVLRGT 64 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P+L+QL ++ LP G S ++ L LN +A+ +EI R + ++ Q DA+ +I Sbjct: 65 PILLQLIFLYNVLPQWGWQLSSETTAVLGLALNAAAFAAEIFRGGLNAVNVSQIDAARSI 124 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+ T+ I LPQ + L+SE I +K+TS+AS I + E+ +Q++VS ++ Sbjct: 125 GLSPALTLLRIRLPQALRVITPALASEAIMTVKNTSLASAIAVAELTLRSQQLVSINFEY 184 Query: 189 LIIYCELAFVYLILTSFCYIIQ----IKIESSVTQH 220 L ++ A +YL L + ++Q ++++ +H Sbjct: 185 LPVFGAAAAIYLALNTILMVVQYLSERRLDNDRQRH 220 >gi|108797843|ref|YP_638040.1| amino acid ABC transporter permease [Mycobacterium sp. MCS] gi|108768262|gb|ABG06984.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter ATP-binding protein, PAAT family [Mycobacterium sp. MCS] Length = 532 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 119/216 (55%), Gaps = 12/216 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGT 68 + P+L+ ++ L IA +S +I+ G +A+I SD+ + L + Y+W+ RGT Sbjct: 9 TLPELIDGGLLA-LRIALLSLIIAWPAGLLLALI----SDSRWFLPRLAVGVYIWVLRGT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P+L+QL ++ LP G S ++ L LN +A+ +EI R + ++ Q DA+ +I Sbjct: 64 PILLQLIFLYNVLPQWGWQLSSETTAVLGLALNAAAFAAEIFRGGLNAVNVSQIDAARSI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+ T+ I LPQ + L+SE I +K+TS+AS I + E+ +Q++VS ++ Sbjct: 124 GLSPALTLLRIRLPQALRVITPALASEAIMTVKNTSLASAIAVAELTLRSQQLVSINFEY 183 Query: 189 LIIYCELAFVYLILTSFCYIIQ----IKIESSVTQH 220 L ++ A +YL L + ++Q ++++ +H Sbjct: 184 LPVFGAAAAIYLALNTILMVVQYLSERRLDNDRQRH 219 >gi|332704464|ref|ZP_08424552.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio africanus str. Walvis Bay] gi|332554613|gb|EGJ51657.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio africanus str. Walvis Bay] Length = 590 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 115/220 (52%), Gaps = 10/220 (4%) Query: 8 LIIDSFPQ-------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 L+I FPQ L + ++ ++ I+ +S IG + + R + + SL Sbjct: 364 LLIWRFPQGDETELFLGLGGLSFSILMSFIAITVSFFIGLVVGLARAS-KNRLFSLPATL 422 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ RGTPL++ +F ++ LP G + F + I+LT+ AY++EI+R I +IP Sbjct: 423 YIECIRGTPLIMVIFWTYFFLPAFTGSYLNVFWSATIALTVFTGAYLAEIVRGGIQNIPP 482 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ + GL+ QT+R I+LPQ + + +FI+I K TS+A I + E+ AQ Sbjct: 483 GQVEAACSTGLSYSQTMRKIVLPQALKQMIPAIVGQFIAIFKDTSLAYVIGVLELTFVAQ 542 Query: 180 RIVST-TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 +++ P IY +A +Y I I+ ++E ++ Sbjct: 543 GLINRLMVYPFEIYSSVAALYFICCYSMSIVAGRLERRLS 582 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 53/173 (30%), Positives = 94/173 (54%), Gaps = 10/173 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP- 82 T+ I +S ++L++G F + R+ + + YV FR TPLLVQLF ++ +P Sbjct: 64 TIKITLVSSFLALLLGTFFGLGRLS-KFKPLRWTSNAYVEFFRNTPLLVQLFFWYFAMPL 122 Query: 83 -------HIGIVFD-SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 D F I L++ ++++E+IR+ + SIPKG +A+Y+ GL+ Q Sbjct: 123 ALPEAAREFAYAQDFEFWTATIGLSIYTGSFMAEVIRAGLQSIPKGLLEAAYSSGLSYFQ 182 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 + IILP PL SEF++ +K++S+A + + E+ +Q++ S T++ Sbjct: 183 VLTRIILPLAFRAIIPPLGSEFLNNMKNSSLAMVVGVAELCWQSQQVESLTFR 235 >gi|323342443|ref|ZP_08082675.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463555|gb|EFY08749.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Erysipelothrix rhusiopathiae ATCC 19414] Length = 220 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 106/181 (58%), Gaps = 2/181 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY-GLP 82 TL I+ + +IS ++G F+A+ ++ + ++I + Y+ + RGTPLL+QL + ++ G Sbjct: 23 TLTISVVVVLISTLLGAFLAMGKMSKFKPLKTII-NVYIEVIRGTPLLLQLSLFYFLGSE 81 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 +I I+++L +N SAY++EI R+ I ++ KGQ++A+ ++G++ ++ II P Sbjct: 82 YISTSVPDVGWIMVALIINSSAYVAEIFRAGIQAVDKGQFEAAKSLGISNANMMKKIIFP 141 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q I L +EFI+++K TS+AS + + + + S T+ L + +Y I+ Sbjct: 142 QAIKNILPALGNEFITMIKETSLASVFFVNNLMTSESIVSSATHLKLPSLMIVGVIYFIM 201 Query: 203 T 203 T Sbjct: 202 T 202 >gi|171778288|ref|ZP_02919494.1| hypothetical protein STRINF_00336 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282988|gb|EDT48412.1| hypothetical protein STRINF_00336 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 230 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 58/176 (32%), Positives = 103/176 (58%), Gaps = 14/176 (7%) Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPH-----IGIVFDSF---VAIIISLTLNFSAYI 106 S++ YV+I R TP +V +F++FYGLP +GI + + + +I+++TL F+A I Sbjct: 53 SVLARGYVFILRCTPPIVLIFLVFYGLPRFLEWWLGIDVNGWSRSIFVILAMTLLFAASI 112 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 SE+ +SS +++PKGQ +A +IGL+ QT I+LPQ + ++S I++LK ++A Sbjct: 113 SEVFKSSYLALPKGQLEAGLSIGLSEPQTFVRILLPQAFRIALPNITSAVINLLKDIALA 172 Query: 167 STITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVY----LILTSFCYIIQIKIESS 216 TI + ++ I+S L Y +A +Y LIL+ +I++ ++E+ Sbjct: 173 YTIGLVDLMGEGNLIISRNMGNYSLETYTAVAVIYWILALILSVVTHIVENQLETK 228 >gi|326803927|ref|YP_004321745.1| putative glutamate/glutamine/aspartate/asparagine transport system permease protein BztB [Aerococcus urinae ACS-120-V-Col10a] gi|326650859|gb|AEA01042.1| putative glutamate/glutamine/aspartate/asparagine transport system permease protein BztB [Aerococcus urinae ACS-120-V-Col10a] Length = 213 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 107/195 (54%), Gaps = 1/195 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++++ L+ T+ ++ ++ V SL+IG + +++ + ++ YV FR Sbjct: 4 LLNNYSSELFLGFKNTIMVSVLALVFSLVIGSLVGIMQTSHPKGL-RMLGDIYVEFFRNI 62 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+ + + +P + + F A +I LT+ SA+I++++RS I ++P GQ +A + Sbjct: 63 PLLIIVMFFYVVVPLYWVKLNGFTAGLIGLTIYTSAFIADVVRSGIEAVPHGQMEAGLSQ 122 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G T +T+ +II PQ + PL ++FI+++K++S+ + + ++ I S T+ Sbjct: 123 GFTATETMVYIIFPQAVRIVIPPLGNQFINLVKNSSILAMVAGLDLMYFGDLIASETFNT 182 Query: 189 LIIYCELAFVYLILT 203 Y +A YL+LT Sbjct: 183 FDSYILVALFYLVLT 197 >gi|256375587|ref|YP_003099247.1| polar amino acid ABC transporter, inner membrane subunit [Actinosynnema mirum DSM 43827] gi|255919890|gb|ACU35401.1| polar amino acid ABC transporter, inner membrane subunit [Actinosynnema mirum DSM 43827] Length = 215 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 111/207 (53%), Gaps = 2/207 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ ++ L A TL + S V SL++G +A++R+ ++ YV + R T Sbjct: 3 VLTNYSDLFLKAFGTTLQLFLFSAVGSLVLGTILAMLRVS-PVPVLRAAGATYVTVLRNT 61 Query: 69 PLLVQLFVIFYGLPHIGIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PL + F + P + I+ D F ++SLT+ SA+I E+IRS I ++P GQ +AS A Sbjct: 62 PLTLVFFFFAFAYPLLKILELDPFKGAVVSLTVYTSAFICEVIRSGINTVPVGQAEASRA 121 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL+ Q + +++LPQ + T PL+S I++LK+T++A+ ++ + Sbjct: 122 LGLSFGQMLGNVVLPQALRTVVPPLASTMIALLKNTTIAAGFSVGDAGAIMYTFSEDGVN 181 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIE 214 L+ +AF++++L +Q +E Sbjct: 182 MLVGLGWVAFIFILLVLPLTAVQRGLE 208 >gi|290890238|ref|ZP_06553318.1| hypothetical protein AWRIB429_0708 [Oenococcus oeni AWRIB429] gi|290480125|gb|EFD88769.1| hypothetical protein AWRIB429_0708 [Oenococcus oeni AWRIB429] Length = 176 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 81/135 (60%), Gaps = 1/135 (0%) Query: 70 LLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 ++V+ V +YG I D + +I +++N AY++EIIR IISI +GQ++A+ A+ Sbjct: 2 MIVKAAVFYYGAAQAFNINLDRTTSALIIVSINTGAYLAEIIRGGIISIDQGQFEAASAL 61 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+T Q + I+LPQ + S +++EFI +K TSV S I++ E+F T I +Q Sbjct: 62 GMTHFQQMEKIVLPQAVRNSIPAVTNEFIVNIKDTSVLSIISVSELFFTGSTIAGQNFQF 121 Query: 189 LIIYCELAFVYLILT 203 Y ++ +YL+LT Sbjct: 122 FHTYLTISLIYLVLT 136 >gi|213854563|ref|ZP_03382803.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 147 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 85/144 (59%), Gaps = 2/144 (1%) Query: 77 IFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 I++ LP + D F A ++++ +N AYI+EI R +++SI KG +A A+GL+R++ Sbjct: 2 IYFALPMAFNDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRE 61 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 TIRH+ILP + PL +++I +K TS+ I + E+ + Q I++ ++ L I+ Sbjct: 62 TIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSA 121 Query: 195 LAFVYLILTSFCYIIQIKIESSVT 218 +A YLI+T I ++E + Sbjct: 122 VAVFYLIITLVLSFILRRLERRMK 145 >gi|115351109|ref|YP_772948.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria AMMD] gi|172060113|ref|YP_001807765.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria MC40-6] gi|115281097|gb|ABI86614.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia ambifaria AMMD] gi|171992630|gb|ACB63549.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 237 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 106/196 (54%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S + + +AV R+ + +S+ + FY ++FRGTPL VQL +++ Sbjct: 21 SGLAVTLWLLVASISLGFVCAVPLAVARVS-KNKWLSMPVRFYTYVFRGTPLYVQLLLMY 79 Query: 79 YGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D+F I++ LN AY +EI +I +IP G+ +A+ A Sbjct: 80 TGMYSLEFVRSHSLLDAFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G+T R +ILP + A+PL S+E I +L +T+VA T T+P+I + A+ S TY Sbjct: 140 GMTPFTMYRRVILPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYM 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL ++ Sbjct: 199 AFQSFGIAALIYLAVS 214 >gi|297627338|ref|YP_003689101.1| Polar amino acid ABC transporter, inner membrane subunit [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296923103|emb|CBL57690.1| Polar amino acid ABC transporter, inner membrane subunit [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 218 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/217 (27%), Positives = 110/217 (50%), Gaps = 7/217 (3%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 + W NL PQ+L +VV+L + ++ VI + G +A I + + + Sbjct: 6 SFWWANL-----PQML-GGLVVSLELTGLALVIGMPFGLLLA-IGMGSRLAPLRWLCIGV 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V + RG P LV L+V+++GLP I + V +I+L Y E IR ++S+ +G Sbjct: 59 VEVGRGVPALVMLYVVYFGLPAIHWSPTAMVCAVIALAFTTGGYTGEYIRGGLVSVGEGT 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A A+ + +R +++PQ + + L I I ++TS+A +IT+ E+ A I Sbjct: 119 WEAGLALAMPTADVLRFVVVPQGMRVAIPSLMGLAIQIFQATSLAYSITVSELTAQAYSI 178 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 S++++ L I+ +Y I+T + ++E ++ Sbjct: 179 SSSSFRALEIFGLAGIIYAIITIPATWVANRVERRLS 215 >gi|126667701|ref|ZP_01738669.1| amino acid ABC transporter [Marinobacter sp. ELB17] gi|126627804|gb|EAZ98433.1| amino acid ABC transporter [Marinobacter sp. ELB17] Length = 217 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 123/214 (57%), Gaps = 4/214 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++ F +I FP LL V +L ++F +S++ G +AVI I+ + ++S + F Sbjct: 1 MEFD-FGPVITYFPTLLKGLGVGSLVAVAVAF-LSVVGGLVVAVISIYI-NKVVSWPLRF 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 ++W+F TPLL+QL+ +++GL I+ + + I+ L ++ AY ++I ++I S+ G Sbjct: 58 FIWLFMTTPLLLQLYFLYFGLGEW-ILIPAILVGILGLGFHYMAYNADIFIATIKSVSGG 116 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++AS +IG TI +II+PQ + L + I ++K TSV S I + E+ +Q Sbjct: 117 QYEASRSIGFGHVATIFYIIVPQAFIRAIPQLGNNMILMVKDTSVLSAIGVAELVHASQY 176 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 +S T++P + +A +Y ++ F + Q +E Sbjct: 177 AISVTFRPFEFFIVIALLYYVINIFMELGQAWLE 210 >gi|271501283|ref|YP_003334308.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270344838|gb|ACZ77603.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 238 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 10/173 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEII 110 + ++FRGTPL VQL V + G+ + IV ++F I++L LN AY +EI Sbjct: 62 FTYVFRGTPLYVQLLVFYSGVYSLEIVRGTDLLNAFFRSGLNCAILALALNTCAYTTEIF 121 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +I S+P G+ +A+ A G +R + R IILP + + S+E I +L ST++A T+T Sbjct: 122 AGAIRSVPHGEIEAARAYGFSRFKQYRCIILPGALRIALPAYSNEVILMLHSTALAFTVT 181 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 +P++ + A+ I + TYQP + +YL ++ + K E +H ++ Sbjct: 182 VPDLLKVARDINAATYQPFYAFGIAGAMYLAISFVLIALFRKAERRWLRHLHT 234 >gi|170742664|ref|YP_001771319.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168196938|gb|ACA18885.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 240 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 114/221 (51%), Gaps = 19/221 (8%) Query: 1 MKYEW-FNLIIDSFPQ-------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT 52 M Y W +++ + P+ +L + ++ T+ A ++VI+ +G I V+R + Sbjct: 1 MNYNWNWSIFFEPSPEGTGTYADMLLSGLLWTIVTALCAWVIAFAVGSVIGVMRTL-PNR 59 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDS-----FVAIIISLTLNF 102 + YV +FR PLLVQ+F+ F+ LP + G F ++ L Sbjct: 60 FAQAFGNGYVELFRNIPLLVQMFLWFFVLPEMLPQSWGTWLKQLPDAPFYTAVVCLGFFT 119 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 ++ ++E +R+ I ++P+GQ A A+GLT QT R+++LP PL+SEF++ LK+ Sbjct: 120 ASRVAEQVRAGIQALPRGQRMAGTALGLTTSQTYRYVLLPNAYRIILPPLTSEFLNNLKN 179 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 TSVA TI + E+ A+ + ++Q + +Y+I+ Sbjct: 180 TSVALTIGLLELTARARSMQEFSFQVFEAFTAATILYIIIN 220 >gi|321224259|gb|EFX49322.1| Putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 226 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 8/219 (3%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---DTIISLIMHFY 61 +FN + + P +V + C +I I GF +I F S ++ I Y Sbjct: 8 FFNDLTEQLP-----LVVDGIKETCKLALIVSITGFLWGIIIFFLSLSHRPVVKAITRLY 62 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + F GTPL++ LFVI+YGLP GI SF + TLN AY + + ++ ++ K + Sbjct: 63 MDFFIGTPLILILFVIYYGLPQSGIHLSSFTVAVTGFTLNVGAYNAAYMTTAYNALNKYK 122 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ GL ++Q IILPQ + +S L+++ I+ LK +++ I E F Q + Sbjct: 123 TEAAVVQGLNKRQVFLWIILPQVLLSSIPALTNQVINNLKDSTIVFLIQYTEFFARIQEV 182 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +T+++ Y A VYLI +F + +E + +H Sbjct: 183 AATSFKFFHAYLFAAIVYLIGVTFIVGLTRFLEHRLLRH 221 >gi|239817010|ref|YP_002945920.1| polar amino acid ABC transporter inner membrane subunit [Variovorax paradoxus S110] gi|239803587|gb|ACS20654.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 240 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 118/215 (54%), Gaps = 7/215 (3%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +I +P +V+TL +A V++L +G + + R+ + + F V++ Sbjct: 9 WVYFLIGQYPNGPLGGLVLTLLLASCGLVLALPLGIVLGLARVSPWRWLRWPVTGF-VFV 67 Query: 65 FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RG PLL+ +F ++ LP + G+ D F ++I+L + +AY++EI+R+ I +P+GQ + Sbjct: 68 VRGLPLLMVIFWAYFFLPSVTGVKTDQFTTMLIALVVFDAAYLAEIVRAGIQGLPRGQME 127 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 + A+GL + +R ++LPQ + + L ++F+S +K TS+ I + E+ A +I + Sbjct: 128 TARALGLDYGRAMRLVVLPQALRSMLPSLVNQFVSTIKETSLGYIIGLAEVSFIATQINT 187 Query: 184 TTY-QPLIIYCELAFVYLI----LTSFCYIIQIKI 213 + +P IY L Y I L+ F Y ++ ++ Sbjct: 188 QVFTKPAQIYLILGLTYFILCFGLSRFAYWLERRL 222 >gi|313107729|ref|ZP_07793911.1| hypothetical protein PA39016_001060056 [Pseudomonas aeruginosa 39016] gi|187939706|gb|ACD38848.1| polar amino acid uptake transporter family protein [Pseudomonas aeruginosa] gi|310880413|gb|EFQ39007.1| hypothetical protein PA39016_001060056 [Pseudomonas aeruginosa 39016] Length = 221 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 103/182 (56%), Gaps = 6/182 (3%) Query: 37 IIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAII 95 + GF +A++R S ++ + +V FRGTPLL+QLF +F+ P + G+ +V++ Sbjct: 35 LAGFGLALLRNVRSR-LLKVPAILFVEFFRGTPLLIQLFWVFFCFPVVFGLDIPPYVSVA 93 Query: 96 ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSE 155 ISLTL +A SE R ++ SI Q DA A+GLT + + +++ PQ + + PL S Sbjct: 94 ISLTLFMTAITSETFRGALKSIAAEQHDACVALGLTMRVKVFYVVFPQALLRAVPPLLSN 153 Query: 156 FISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQI 211 +S+ K +++ S++ + ++ Q I ++T +P+ +A +Y + LT +++ Sbjct: 154 LVSLFKESALISSVGVADLMFVGQNISNSTARPVEFLSAVAVIYFLVAFPLTRLVGVVEA 213 Query: 212 KI 213 ++ Sbjct: 214 RM 215 >gi|227329656|ref|ZP_03833680.1| binding-protein-dependent transport system inner membrane component [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 247 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 106/194 (54%), Gaps = 29/194 (14%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQ 73 L+ ++TL ++ + V+S ++GF +A R D I ++ Y +FR TPLLVQ Sbjct: 21 LWHGFLITLGLSLSTIVLSTVLGFLLAAAR----DGQIHVLRGVVVAYSSLFRNTPLLVQ 76 Query: 74 LFVIFYGL--------------PHIGIVFD--------SFVAIIISLTLNFSAYISEIIR 111 LF ++G PH +F F+A + LTL SA+I+E IR Sbjct: 77 LFFWYFGAGQLFPSEMMQWLNTPHTLSLFGMTLAWPSFEFLAGLAGLTLYSSAFIAEEIR 136 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + I + +GQ A++A+GLT Q++R+++LPQ + + PL ++++I+K++S+ I + Sbjct: 137 AGIRGVARGQKYAAHALGLTGFQSMRYVVLPQALKIALPPLLGQYMNIVKNSSLTMAIGV 196 Query: 172 PEIFQTAQRIVSTT 185 E+ ++++ + T Sbjct: 197 AELSYASRQVETET 210 >gi|119387585|ref|YP_918619.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119378160|gb|ABL72923.1| amino acid ABC transporter membrane protein 1, PAAT family [Paracoccus denitrificans PD1222] Length = 230 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 51/203 (25%), Positives = 112/203 (55%), Gaps = 4/203 (1%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++W + PQ+L A VVT+ +A +S V+ +++ + + R+ I+S + +V Sbjct: 15 FQW-KQAMARLPQMLDGA-VVTMQVAILSMVLGILLAIILTMFRLS-GIRILSAVAKTWV 71 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R TP L Q+++ +GL G+ F++I+I +T N + Y++E R ++ +IP Q Sbjct: 72 EIARNTPALFQIYMAHFGLGSFGLHLSPFLSILIGITFNNAGYLTENFRGALKAIPDTQT 131 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP-EIFQTAQRI 181 A+ ++G+ RH++LPQ + S +P++++ + + TS+ T+ + +++ Q + Sbjct: 132 RAARSLGMGAAGAFRHVVLPQMLRISFLPMTNQMVWAILMTSLGVTVGMNTDLYGVTQDL 191 Query: 182 VSTTYQPLIIYCELAFVYLILTS 204 + T++ ++ A ++ +T Sbjct: 192 NALTFRTFELFALAAVIFYAITK 214 >gi|85705013|ref|ZP_01036113.1| polar amino acid uptake family ABC transporter, permease protein [Roseovarius sp. 217] gi|85670335|gb|EAQ25196.1| polar amino acid uptake family ABC transporter, permease protein [Roseovarius sp. 217] Length = 261 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 25/173 (14%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI----------------IISLTLNFSAYIS 107 I RGTPLL+Q+++++YGL G +F + I +++LTL+++ Y Sbjct: 88 IIRGTPLLLQIWLLYYGL---GSLFPQYPWIRGSELWPYLRQAWPYAVLALTLSYAGYEG 144 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E++R S+ KGQ +A+ A G+ R R I LPQ I L E I LK+T + + Sbjct: 145 EVMRGGFASVQKGQLEAARAFGMPRFTIFRRIWLPQAIRNVLPTLGGETILQLKATPLVA 204 Query: 168 TITIPEIFQTAQRIVSTT---YQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 TIT+ EI+ + R+ + T Y+PL++ LA VY+I+ ++ +E+ V Sbjct: 205 TITVIEIYSVSNRVRADTFIVYEPLLL---LALVYMIIAGLIALMFRWVENRV 254 >gi|300937879|ref|ZP_07152671.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|300457104|gb|EFK20597.1| ABC transporter, permease protein [Escherichia coli MS 21-1] Length = 255 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 52/214 (24%), Positives = 118/214 (55%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ ++G F ++R + +S + YV +FR PL+VQ F Sbjct: 34 IWSGFQVTIALSICAWIIAFLVGSFFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 92 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F + F++ ++ L L +A + E +R++I S+P+GQ + Sbjct: 93 WYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 152 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 153 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 212 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 213 YSAHAWESFTAITLAYVLINAVIMLVMTLVERKV 246 >gi|300980890|ref|ZP_07175236.1| putative arginine/ornithine transport protein [Escherichia coli MS 200-1] gi|300307703|gb|EFJ62223.1| putative arginine/ornithine transport protein [Escherichia coli MS 200-1] Length = 228 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V+++IIG A ++ + + LI Y + RG P Sbjct: 4 GFSGVILQGALVTLELAISSVVLAVIIGLIGASGKLS-QNRLSGLIFEGYTTLIRGVPGF 62 Query: 72 VQLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G TR Q R I+ P + + + + + ILKST++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +T++P +YL+ T+ Sbjct: 183 AGKSTWEPFYFAIVCGVIYLVFTT 206 >gi|254422592|ref|ZP_05036310.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC 7335] gi|196190081|gb|EDX85045.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC 7335] Length = 476 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 72/114 (63%) Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 ++VA + LT A+I+EI+R+ I S+P+GQW+A+ ++GLT + +R ++ PQ++ Sbjct: 344 NYVASVTGLTFYTGAFIAEIVRAGIQSVPRGQWEAARSVGLTNDKAMRLVVFPQSLRVLL 403 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL+SEF ++ K++S+A + PE++ A + T +P+ ++ + YL L Sbjct: 404 PPLNSEFANLAKNSSLAFAVGYPELYNLANTTFNQTGKPIEVFLMMMATYLTLN 457 >gi|205351950|ref|YP_002225751.1| glutamate/aspartate transport system permease GltJ [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205271731|emb|CAR36564.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326626989|gb|EGE33332.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 246 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 117/214 (54%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++ +++I+ ++G ++R D +S + YV +FR PL+VQ F Sbjct: 25 LWSGFQVTVALSITAWIIAFLVGSIFGILRTV-PDRFLSGLGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPHI-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P + G+ F + F++ +I L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVVPELLPEDLGMWFKAELDPNIQFFLSSMICLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 204 YSAHAWESFTAITLAYVLINAVIMLVMSLVERKV 237 >gi|254389484|ref|ZP_05004711.1| glutamate transport system permease protein gluC [Streptomyces clavuligerus ATCC 27064] gi|294815861|ref|ZP_06774504.1| Putative glutamate ABC transporter permease [Streptomyces clavuligerus ATCC 27064] gi|326444203|ref|ZP_08218937.1| glutamate transporter permease [Streptomyces clavuligerus ATCC 27064] gi|197703198|gb|EDY49010.1| glutamate transport system permease protein gluC [Streptomyces clavuligerus ATCC 27064] gi|294328460|gb|EFG10103.1| Putative glutamate ABC transporter permease [Streptomyces clavuligerus ATCC 27064] Length = 214 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 117/221 (52%), Gaps = 9/221 (4%) Query: 7 NLIIDSFPQLLYA-AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 +++ D+F YA + T+ + S +++L +GF +A R+ + + I +V + Sbjct: 2 DVLTDNFST--YAEGFLGTVELTFFSSLLALALGFLMAGFRVAPVGALRA-IGTVWVTVL 58 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPL + F + GLP G+V V +++L SA+I E +RS I ++P+GQ +A+ Sbjct: 59 RNTPLTLLFFAVLLGLPRFGLVLPFTVFAVLALGCYTSAFICEALRSGINTVPRGQGEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++G++ QT+ +ILPQ T P+ S I++ K++++A ++ E+ T + + Sbjct: 119 RSLGMSFGQTLTVVILPQAFRTVIPPVGSTLIALAKNSAIAGAFSVTELLSTYKTLSELG 178 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 Y + + +A YLI+T + I +V + Y V + Sbjct: 179 YNIVWTFVWIAVGYLIIT-----LTISALFNVLEKRYGVAR 214 >gi|326315080|ref|YP_004232752.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] gi|323371916|gb|ADX44185.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 241 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 77/139 (55%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 ++ + YV R TP LVQL +F+GLP +G+ + + A +++ +N AY++EI+R+ Sbjct: 53 LNWLFKLYVEAIRNTPFLVQLMFVFFGLPSLGLQLNEWQACLLTTVVNLGAYLTEIVRAG 112 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I P+GQ +A+ A+G+ R RH++L + LSS+ + ++ TSV S I + Sbjct: 113 IQETPRGQLEAASALGMGRWACFRHVVLRPALQKVWPALSSQIVIVMLGTSVVSQIAAQD 172 Query: 174 IFQTAQRIVSTTYQPLIIY 192 + A I S ++ Y Sbjct: 173 LTFAANFIQSRNFRAFETY 191 >gi|261340701|ref|ZP_05968559.1| histidine transport system permease protein HisQ [Enterobacter cancerogenus ATCC 35316] gi|288317117|gb|EFC56055.1| histidine transport system permease protein HisQ [Enterobacter cancerogenus ATCC 35316] Length = 228 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 111/225 (49%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V++++IG A ++ ++ ++LI Y + RG P L Sbjct: 4 GFSGVILQGALVTLELALSSVVLAVLIGLAGAGAKLS-ANKPLALIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL IG I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNGVTDAIGMDQIDIDPMVAGIITLGFIYGAYFTETFRGAYMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G T QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTSSQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T++P +YL+ T+ + + +E + D Sbjct: 183 AGKSTWEPFYFAVVCGVIYLVFTTASNGVLLLLERRYSVGVKRAD 227 >gi|209547000|ref|YP_002278918.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538244|gb|ACI58178.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 402 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 43/111 (38%), Positives = 71/111 (63%) Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 AI+I++ +N +AYI+EI+R +I +PKGQW+A+ A+GL+RK TIR +ILPQ L Sbjct: 272 AILIAIVVNSAAYIAEIVRGAIEGLPKGQWEAAAAVGLSRKDTIRDVILPQVFRIILPSL 331 Query: 153 SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ +IS+ K TS+ I P++F + + + T L + +YL+L+ Sbjct: 332 ANRYISLTKDTSLGIAIGFPDLFNVSGTVANQTGHSLETVLIVMAIYLMLS 382 >gi|157146735|ref|YP_001454054.1| hypothetical protein CKO_02509 [Citrobacter koseri ATCC BAA-895] gi|157083940|gb|ABV13618.1| hypothetical protein CKO_02509 [Citrobacter koseri ATCC BAA-895] Length = 246 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 118/214 (55%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++ +++I+ ++G ++R + +S + YV +FR PL+VQ F Sbjct: 25 LWSGFQVTVALSITAWIIAFLVGSLFGILRTV-PNRFLSGMGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P +IG+ F + F++ +I L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVVPELLPENIGMWFKAELDPNIQFFLSSMICLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 204 YSAHAWESFTAITLAYVLINAVIMLVMNLVERKV 237 >gi|317970284|ref|ZP_07971674.1| polar amino acid ABC transporter, inner membrane subunit [Synechococcus sp. CB0205] Length = 318 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 36/221 (16%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL-- 74 L A +V TL + I + + I+G + V F + ++ + YV + R PLL+QL Sbjct: 79 LLAGLVNTLRVVVIGLIGASIVGTAVGVAS-FSGNALLRGLARVYVELIRNIPLLLQLVF 137 Query: 75 --FVIFYGLPHI-------GIVFD------------------------SFVAIIISLTLN 101 FV+F LP G+V F A++ L + Sbjct: 138 WYFVVFLSLPGGAQAIQWPGVVLAQSGLYLGMPELVNGVWQAPIRLSVEFAALLTGLIVY 197 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 SA+ISE++R I S+PKGQW+A+ A+G + QT+R ++LPQ + L++++IS+ K Sbjct: 198 ISAFISEVVRGGIASVPKGQWEAARALGFSPLQTLRRVVLPQALPVIVPGLNNQYISLAK 257 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 S+S+A +++ A+ ++ T + + + L YL + Sbjct: 258 SSSLAIACGYADLYSVAETTLNQTGRAVEVMVILLGAYLAM 298 >gi|117621263|ref|YP_855305.1| glutamine transport system permease protein GlnP [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562670|gb|ABK39618.1| glutamine transport system permease protein GlnP [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 220 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 83/137 (60%), Gaps = 1/137 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 ++ Y+ +FR P+LV L++ F+GLP G+ +F ++ L L ++ + E++R + Sbjct: 55 VLRVYLELFRVVPVLVWLYLFFFGLPIFFGLDIPAFWCAVLVLALWGASEVGEVVRGGLG 114 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ +GQ +A A+GL+R Q RH++LPQ + P + + I+K++S+A I + E+ Sbjct: 115 SLARGQQEAGLALGLSRWQLYRHVLLPQALQRLTPPTINIYTRIIKTSSLAVLIGVVEVI 174 Query: 176 QTAQRIVSTTYQPLIIY 192 + Q+I+ TY L+IY Sbjct: 175 KVGQQIIERTYGSLLIY 191 >gi|146310839|ref|YP_001175913.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter sp. 638] gi|145317715|gb|ABP59862.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein [Enterobacter sp. 638] Length = 246 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/211 (25%), Positives = 116/211 (54%), Gaps = 14/211 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++ +++I+ ++G ++R + +S + YV +FR PL+VQ F Sbjct: 25 LWSGFQVTVALSITAWIIAFLVGSLFGILRTV-PNRFLSSLGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P ++G+ F S FV+ ++ L L +A + E +RS I S+P+GQ + Sbjct: 84 WYLVVPELLPENLGMWFKSELDPNIQFFVSSMLCLGLFTAARVCEQVRSGIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + + + Y+++ + ++ +E Sbjct: 204 YSAHAWESFTAITLAYVLINTVIMLVMNLVE 234 >gi|26991115|ref|NP_746540.1| amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] gi|24986153|gb|AAN70004.1|AE016638_12 amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] Length = 218 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 89/161 (55%), Gaps = 2/161 (1%) Query: 61 YVWIFRGTPLLVQLFVIFY--GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y+ IFRGT LLVQLF +F+ LP + + I+ L L+ AY +EI+R +I S+ Sbjct: 51 YIEIFRGTSLLVQLFWLFFVLPLPPFNLELSPYTVAIVGLGLHIGAYGAEIMRGAINSVA 110 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ++A A+ R IILPQ + + P ++ I +LK+TS+ S IT+ ++ A Sbjct: 111 KGQYEACTALNFRPFTRFRRIILPQALLAAMGPGTNLLIELLKNTSLVSLITLADLSFRA 170 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 +++ T++ L ++ +Y ++ + ++E + + Sbjct: 171 RQLDQATFETLKVFALALLMYFVMAQAINLAMRRLERHLAR 211 >gi|238786810|ref|ZP_04630611.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia frederiksenii ATCC 33641] gi|238725178|gb|EEQ16817.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia frederiksenii ATCC 33641] Length = 255 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/170 (33%), Positives = 93/170 (54%), Gaps = 31/170 (18%) Query: 61 YVWIFRGTPLLVQLFVIFYGL------PHIGIV-----------------FDSFVAIIIS 97 Y+ RGTPL VQ+ V+ + L P GI+ + +F++ I++ Sbjct: 69 YISAIRGTPLFVQIMVVHFALVPLFINPRDGILVTNGIMSSDFARMLRSDYGAFLSCIVA 128 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 +TLN AY+SEI R+ I SI +GQ +AS ++G++ +T+R +ILPQ PL + I Sbjct: 129 ITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLPPLGNNAI 188 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTY----QPLIIYCELAFVYLILT 203 +I+K +S+AS I + ++ A R VS Y +P Y ++ VY ++T Sbjct: 189 AIVKDSSLASAIGLADL-AYAARTVSGAYATYWEP---YLAISLVYWVIT 234 >gi|271970517|ref|YP_003344713.1| glutamine ABC transporter permease [Streptosporangium roseum DSM 43021] gi|270513692|gb|ACZ91970.1| glutamine ABC transporter, permease protein, putative [Streptosporangium roseum DSM 43021] Length = 282 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 108/186 (58%), Gaps = 12/186 (6%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR-----IFFSDTIISLIMHFYVWI 64 + + P +L + ++ + I I+ + LI+G +A+ R +FF +++ Y + Sbjct: 66 VKALPDVL-SGFLLNIKIFLIAEPLILIVGLLVALARNLKAPVFFPLRALAVA---YTDV 121 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 FRG P ++ ++++ +GLP +G+ D +I+LTL++ AY++E+ R+ I S+ Q Sbjct: 122 FRGVPTILVIYLVGFGLPALGLQGMPTDLATLGVIALTLSYGAYVAEVFRAGIDSVHPSQ 181 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W A+ ++GL+ +T+R++++PQ PL ++F+S+ K T++ +TI E + AQ Sbjct: 182 WAAARSLGLSHGRTMRYVVVPQAARRVVPPLLNDFVSLQKDTALVATIGPLEALRQAQIH 241 Query: 182 VSTTYQ 187 ++T+ Sbjct: 242 AASTFN 247 >gi|46202161|ref|ZP_00208410.1| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum magnetotacticum MS-1] Length = 542 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 103/193 (53%), Gaps = 12/193 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+V TL I+ ++ ++L++G +R D ++ + YV +FR PLLVQ+F+ F+ Sbjct: 325 ALVWTLAISLSAWALALVLGVVAGALRTV-PDRRVAGLATAYVELFRNIPLLVQMFLWFF 383 Query: 80 GLPHI-----------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +P + + FV + L L S+ ++E +R+ I S P+GQ A+ A+ Sbjct: 384 VVPELLPSSWALWVKQEMPAKEFVIAFLCLGLFTSSRVAEQVRAGIESRPRGQRMAALAL 443 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT Q RH+ LP + PL+SEF+++ K++SVA I + E+ A+++ + Q Sbjct: 444 GLTETQVFRHVTLPVALRVVIPPLTSEFMNVFKNSSVAFAIGMAELTFVARQMQEESEQG 503 Query: 189 LIIYCELAFVYLI 201 + + +Y + Sbjct: 504 IETLAAVTLLYFL 516 >gi|240140777|ref|YP_002965257.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Methylobacterium extorquens AM1] gi|240010754|gb|ACS41980.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Methylobacterium extorquens AM1] Length = 240 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 113/221 (51%), Gaps = 19/221 (8%) Query: 1 MKYEW-FNLIIDSFPQ-------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT 52 M Y W + + ++ P+ +L + + T+ A S+ I+ +G + V+R S T Sbjct: 1 MNYTWNWGIFLEPSPEGAGTYADMLLSGLAWTVVTALCSWAIAFTLGSVVGVMRTLPSRT 60 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPH---------IGIVFDS-FVAIIISLTLNF 102 + I YV FR PLLVQ+F+ ++ LP + + D+ F ++ L Sbjct: 61 A-NAIGAAYVEGFRNVPLLVQMFLWYFVLPELLPARLSSAVKQMPDAPFYTAVLCLGFFT 119 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +A ++E +R+ I ++P+GQ A A+GLT QT R ++LP PL+SEF++ LK+ Sbjct: 120 AARVAEQVRAGIRALPRGQAQAGLALGLTWAQTYRAVLLPNAYRIILPPLTSEFLNNLKN 179 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 TSVA TI + E+ A+ + ++Q + +Y+ L Sbjct: 180 TSVALTIGLLELTARARSMQEFSFQVFEAFTAATLLYVALN 220 >gi|239815857|ref|YP_002944767.1| polar amino acid ABC transporter inner membrane subunit [Variovorax paradoxus S110] gi|239802434|gb|ACS19501.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 219 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 115/203 (56%), Gaps = 4/203 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++W +I + Q L +T+ + ++ ++++ G +A++R+ + + S + F Sbjct: 1 MTFDWS--VIWTHRQALLEGAALTVGLTVLTMLLAVPGGIVLALMRLSSNKLLQSASLGF 58 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 V FR PL++ ++ +FY +P + V +++L LN SAY +E R+ I SI K Sbjct: 59 -VEFFRNLPLILVIYWVFYVMPMAVDFQLSPLVTALVALVLNISAYNAETFRAGINSIRK 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ A+G++R+Q + +++PQ ++S ++S+ K TS+ S I + E+ TA Sbjct: 118 GQLEAALAMGMSRRQAMFKVVIPQAGRRILPVIASTWVSLFKDTSLVSVIAVSELAYTAM 177 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 +I + T++ L + +A +Y ++ Sbjct: 178 QIRAQTFRVLEMLTAMAVLYWLM 200 >gi|56751275|ref|YP_171976.1| basic amino acids and glutamine ABC transporter permease [Synechococcus elongatus PCC 6301] gi|56686234|dbj|BAD79456.1| ABC-type permease for basic amino acids and glutamine [Synechococcus elongatus PCC 6301] Length = 379 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 73/115 (63%) Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 F A+++ L A+I+EIIR I+S+P GQW+A+ A+GLTR QT+ I++PQ + Sbjct: 246 EFTALLLGLVAYTGAFITEIIRGGILSVPAGQWEAAAALGLTRSQTLWQIVVPQALRVIV 305 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 L+S+++ K++S+A + P+++ TAQ ++ T +P+ ++ L YL + + Sbjct: 306 PSLNSQYVGFAKNSSLAIAVGYPDLYATAQTTLNQTGRPVEVFLILMLTYLAINA 360 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 DS+ + L +V +L + I +++ +IG +A + F + ++ + YV + R TPL Sbjct: 78 DSYARALVVGLVNSLRVIAIGLILTTVIG-TLAGVAAFSENWLLRQLSRGYVAVVRNTPL 136 Query: 71 LVQLFVIFY 79 L+QL V ++ Sbjct: 137 LLQLIVWYF 145 >gi|297206367|ref|ZP_06923762.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus jensenii JV-V16] gi|297149493|gb|EFH29791.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus jensenii JV-V16] Length = 212 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 105/203 (51%), Gaps = 10/203 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++ W NL+ + VT+ I+ IS SLI+G A++ + + I + H Sbjct: 5 LQNNWSNLL---------SGFGVTIMISIISLCASLILGTVFAIMEVV-PNKIAQAVAHT 54 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ +FR PLLV + + +P F A I L+L SA+I+E IR+ I S+ G Sbjct: 55 YIELFRNIPLLVITMIFYLIVPQYLFKISGFTAGCIGLSLYTSAFIAECIRAGINSVGDG 114 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q + + + G+T Q +R +ILPQ + L ++FI+++K++SV + + ++ Sbjct: 115 QMEGARSNGMTYMQAMRFVILPQAFKVAIPSLGNQFINLIKNSSVLAFVAGFDLMYQGDV 174 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I +++Q + Y + YL+LT Sbjct: 175 IAFSSFQTVNTYLVVGCFYLVLT 197 >gi|158313074|ref|YP_001505582.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EAN1pec] gi|158108479|gb|ABW10676.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EAN1pec] Length = 290 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 61/190 (32%), Positives = 100/190 (52%), Gaps = 3/190 (1%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 LL+ ++ TL A V+++ +G +A R + ++S+ V + RG PLL+ +F Sbjct: 62 LLWEGLLDTLRAAATGMVLAVAVGTALAFARQS-NRRLVSIPATAVVEMLRGLPLLMLIF 120 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 + GLP +GI +F A++I LT A +SEI R+ I SI KGQ +A+ A+GL Q Sbjct: 121 FAYLGLPQLGINLSAFWALVIGLTAYNGAVLSEIFRAGIQSIDKGQTEAAAALGLRGTQI 180 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTYQPLIIYC 193 I PQ + + L S+ +++LK TS+ I E+ + + V L +Y Sbjct: 181 FTLIQFPQAVRRMSPTLVSQLVTLLKDTSLGFVIGYTELLRQGRSAVEFLGGRYALPVYT 240 Query: 194 ELAFVYLILT 203 LA +Y+I+ Sbjct: 241 VLAVMYIIVN 250 >gi|227890383|ref|ZP_04008188.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] gi|227849197|gb|EEJ59283.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] Length = 212 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 99/180 (55%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + I+ SLI+G A++ + + + H Y+ IFR PLLV + + +P Sbjct: 19 TILCSVIALFFSLILGVGFALL-VVAPNKFGRAVAHVYIEIFRNIPLLVITMIFYLIVPQ 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 I F A I LTL SA+I+E +R+ I S+ GQ + + + G+T Q +R++ILPQ Sbjct: 78 IWFKVSGFAAGTIGLTLYTSAFIAETVRAGINSVGDGQMEGARSNGMTYTQAMRYVILPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + PL ++FI+++K++SV + + ++ A I ++++ + Y + YL+LT Sbjct: 138 ALKIVIPPLGNQFINLIKNSSVLAFVAGFDLMYQADVIAFSSFETINTYVVVGLFYLVLT 197 >gi|54288344|gb|AAV31632.1| predicted abc-type amino acid transport system permease component [uncultured alpha proteobacterium EBAC2C11] Length = 224 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/191 (30%), Positives = 103/191 (53%), Gaps = 2/191 (1%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L+ + + +L + + + + F +A+ R + I+ I Y+ R TPL+VQLF Sbjct: 17 LILSGALTSLSLTVAAGIFGFMFAFLLAMSR-YRKIPIVEYIAAAYIDFIRNTPLIVQLF 75 Query: 76 VIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 I +GLP + G V+ + +++LT+NFS Y +EI+RS S KGQ +A+ A+ L+ + Sbjct: 76 FIAFGLPMLFGYVWPFWCHALLALTINFSGYFAEILRSGFASTQKGQLEAAAALNLSNRT 135 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 II+PQT+ LSS+FI + +T V S I + ++ I S T++ ++ Sbjct: 136 IFGSIIVPQTLIKMYPSLSSQFIFLFLTTGVISEIGVEDLTHAGLYIDSRTFRSFEVFIT 195 Query: 195 LAFVYLILTSF 205 L +Y+ + F Sbjct: 196 LTAIYVAIALF 206 >gi|312132395|ref|YP_003999734.1| hism3 [Bifidobacterium longum subsp. longum BBMN68] gi|311772678|gb|ADQ02166.1| HisM3 [Bifidobacterium longum subsp. longum BBMN68] Length = 219 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 104/194 (53%), Gaps = 6/194 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++W + + ++TL I+ ++++ +G A + I + I+ Sbjct: 1 MTFDWS--FVQRYAPFFVNGTLMTLFISVFGILLAIAVGLVCAGVEIA-RIPVARQIVRI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLLVQL+ +++GLP +G+V+ + I+ L +Y++E +R + ++P Sbjct: 58 YIELSRNTPLLVQLYFLYFGLPKLGVVWSAETCAIVGLGFLGGSYMAEAMRGGLEAVPNV 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q + +Y +GLT Q I +ILPQ ++T+ + + I + K +SV S I + ++ A+ Sbjct: 118 QRETAYVLGLTSTQIITRVILPQAVSTAIPGVVANVIFLFKESSVVSAIALADVMYMAKD 177 Query: 181 IVS---TTYQPLII 191 ++ +TY+ L + Sbjct: 178 LIGMYYSTYESLFV 191 >gi|295099883|emb|CBK88972.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Eubacterium cylindroides T2-87] Length = 186 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 82/131 (62%), Gaps = 7/131 (5%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVF--DSFVAIIISLTLNFSAY 105 I+ I +FYV I RGTP+L+Q+ ++F +P I G V + ++ II++++N AY Sbjct: 52 ILRAIGNFYVEIIRGTPMLLQILMLFSVVPSIYTAITGNVLRINVYLIGIIAMSINSGAY 111 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 +E+IRS I + KGQW+A +GL+ QT++ +ILPQ P+ SEFI+++K +S+ Sbjct: 112 STELIRSGINGVDKGQWEACETLGLSSWQTMKLVILPQAFKLIVPPVISEFITLIKDSSL 171 Query: 166 ASTITIPEIFQ 176 S I E+ + Sbjct: 172 TSCIGAIELLK 182 >gi|163744468|ref|ZP_02151828.1| polar amino acid uptake family ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] gi|161381286|gb|EDQ05695.1| polar amino acid uptake family ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] Length = 256 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 111/206 (53%), Gaps = 24/206 (11%) Query: 32 FVISLIIGFFIAVIRIFFSDTI----ISLIMHFYVWIFRGTPLLVQLFVIFYGL----PH 83 V++ ++GF +A I + + I +S+ + + RGTPLL+Q+++++YGL P Sbjct: 53 LVVTCVLGFLLA-IPLGLAQAIGPWYLSVPARVFCTVIRGTPLLLQIWLLYYGLGSLFPQ 111 Query: 84 IGIVFDS---------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 I + S + +++LTL+++ Y E++R + S+ KGQ +A+ A G+ R Sbjct: 112 IPWIRGSELWPYLRQAWPYAVLALTLSYAGYEGEVMRGAFSSVNKGQLEAANAFGMPRFT 171 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPLII 191 R I LPQ I L E I LK+T + +TIT+ E++ + R+ S T Y+PLI+ Sbjct: 172 MFRRIWLPQAIRNVLPTLGGETILQLKATPLVATITVVELYAVSSRVRSDTFIVYEPLIL 231 Query: 192 YCELAFVYLILTSFCYIIQIKIESSV 217 LA Y+I+ ++ + E+ V Sbjct: 232 ---LAVFYMIIAGIIALMFRRFENRV 254 >gi|120608917|ref|YP_968595.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax citrulli AAC00-1] gi|120587381|gb|ABM30821.1| amino acid ABC transporter membrane protein 1, PAAT family [Acidovorax citrulli AAC00-1] Length = 228 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 77/139 (55%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 ++ + YV R TP LVQL +F+GLP +G+ + + A +++ +N AY++EI+R+ Sbjct: 53 LNWLFKLYVEAIRNTPFLVQLMFVFFGLPSLGLQLNEWQACLLTTVVNLGAYLTEIVRAG 112 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I P+GQ +A+ A+G+ R RH++L + LSS+ + ++ TSV S I + Sbjct: 113 IQETPRGQLEAASALGMGRWACFRHVVLRPALQKVWPALSSQIVIVMLGTSVVSQIAAQD 172 Query: 174 IFQTAQRIVSTTYQPLIIY 192 + A I S ++ Y Sbjct: 173 LTFAANFIQSRNFRAFETY 191 >gi|16264464|ref|NP_437256.1| putative amino acid uptake ABC transporter permease protein [Sinorhizobium meliloti 1021] gi|307306765|ref|ZP_07586506.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|15140601|emb|CAC49116.1| ABC transporter, permease [Sinorhizobium meliloti 1021] gi|306902056|gb|EFN32654.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 219 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 103/187 (55%), Gaps = 1/187 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + V++ I+ +S V+ ++G F+ + + + + I+ Y RGTP+LV + Sbjct: 16 LLKGLGVSVSISLLSIVVGTVLGVFVG-LALVYGFRPVKWIVRGYTDFIRGTPVLVLVLA 74 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +Y L IGI F A +++L + S+++ E++R ++ SIPKGQ +A+ AIGLT QT Sbjct: 75 SYYVLSTIGIDLGPFQAGVLALAVFCSSHVGELVRGALQSIPKGQTEAAKAIGLTFAQTF 134 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +++ PQ + + + ++K++++ S I + E+ Q ++S T+ L Y Sbjct: 135 TYVLGPQALRQALPAWVNTAAEMVKASTLLSIIGVSELLLRTQELISRTFMSLEFYFFAG 194 Query: 197 FVYLILT 203 F+Y ++ Sbjct: 195 FLYFVIN 201 >gi|283853863|ref|ZP_06371079.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] gi|283570738|gb|EFC18782.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] Length = 231 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 113/214 (52%), Gaps = 7/214 (3%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I FPQ + +T+ +A + +G I + RI + M Y+ I RGT Sbjct: 14 LIGGFPQGPLGGLAMTVLLAVGGIFGAFWLGLGIGLFRISKLRRLRWPAM-VYIEIIRGT 72 Query: 69 PLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PLL+ +F ++ P +G + +I+L + SAYI+EI+R+ + ++PKGQ +A+ Sbjct: 73 PLLMVVFWFYFLAPVLLGKTLPEAQSALIALIVFTSAYIAEIVRAGVEALPKGQMEAARG 132 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY- 186 GL QT+ H+ILPQ + ++F+S+ K TS+A I + E+ + A ++ S T Sbjct: 133 TGLNHFQTMTHVILPQALFNMIPSFVNQFVSLTKDTSLAFIIGVNELTKAATQVNSRTLT 192 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P I+ +A +Y ++ CY + ++ + +H Sbjct: 193 APTEIFITIALLYFVI---CYCL-TELSRRLEKH 222 >gi|82544789|ref|YP_408736.1| histidine transport system permease protein [Shigella boydii Sb227] gi|81246200|gb|ABB66908.1| histidine transport system permease protein [Shigella boydii Sb227] gi|320174664|gb|EFW49797.1| Histidine ABC transporter, permease protein HisQ [Shigella dysenteriae CDC 74-1112] gi|320183764|gb|EFW58598.1| Histidine ABC transporter, permease protein HisQ [Shigella flexneri CDC 796-83] Length = 228 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V+++IIG A ++ + + LI Y + RG P L Sbjct: 4 GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLS-QNRLSGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IF+GL +G I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFFGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G TR Q R I+ P + + + + + ILKST++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +T++P +YL+ T+ Sbjct: 183 AGKSTWEPFYFAIVCGVIYLVFTT 206 >gi|81299058|ref|YP_399266.1| ABC-type permease for basic amino acids and glutamine [Synechococcus elongatus PCC 7942] gi|81167939|gb|ABB56279.1| ABC-type permease for basic amino acids and glutamine [Synechococcus elongatus PCC 7942] Length = 377 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 73/115 (63%) Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 F A+++ L A+I+EIIR I+S+P GQW+A+ A+GLTR QT+ I++PQ + Sbjct: 244 EFTALLLGLVAYTGAFITEIIRGGILSVPAGQWEAAAALGLTRSQTLWQIVVPQALRVIV 303 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 L+S+++ K++S+A + P+++ TAQ ++ T +P+ ++ L YL + + Sbjct: 304 PSLNSQYVGFAKNSSLAIAVGYPDLYATAQTTLNQTGRPVEVFLILMLTYLAINA 358 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 DS+ + L +V +L + I +++ +IG +A + F + ++ + YV + R TPL Sbjct: 76 DSYARALVVGLVNSLRVIAIGLILTTVIG-TLAGVAAFSENWLLRQLSRGYVAVVRNTPL 134 Query: 71 LVQLFVIFY 79 L+QL V ++ Sbjct: 135 LLQLIVWYF 143 >gi|146312499|ref|YP_001177573.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter sp. 638] gi|145319375|gb|ABP61522.1| L-arginine ABC transporter membrane protein / L-lysine ABC transporter membrane protein / L-histidine ABC transporter membrane protein / L-ornithine ABC transporter membrane protein [Enterobacter sp. 638] Length = 228 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V++++IG A ++ S+ I++L+ Y + RG P L Sbjct: 4 GFSGVILQGALVTLELALSSVVLAVLIGLVGAGAKLS-SNRILALVFEAYTTLIRGVPDL 62 Query: 72 VQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL IG I D VA II+L + AY +E R + +++P+G Sbjct: 63 VLMLLIFYGLQIALNSVTDAIGMSQIDIDPMVAGIITLGFIYGAYFTETFRGAYMAVPRG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G T Q R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTASQIFRRIMFPAMMRFALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T++P +YL+ T+ + + +E + D Sbjct: 183 AGKSTWEPFYFAVVCGLIYLVFTTVSNGVLLLLERRYSVGVKRAD 227 >gi|56708861|ref|YP_164902.1| polar amino acid ABC transporter permease [Ruegeria pomeroyi DSS-3] gi|56680546|gb|AAV97211.1| polar amino acid uptake family ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 262 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 24/204 (11%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL----PHIG 85 + F++++ +GF AV +++ + + RGTPLL+Q+++++YGL P I Sbjct: 60 LGFLLAVPLGFAQAV-----GPWYLAVPARVFCTLIRGTPLLLQIWLLYYGLGSVFPQID 114 Query: 86 IVFDS---------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 + DS + +++LTL+F+ Y E++R + + +GQ +A+ + G+ R Sbjct: 115 GIRDSVLWPYLRQAWPYALLALTLSFAGYEGEVMRGAFSGVNRGQLEAARSFGMPRFTLF 174 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPLIIYC 193 R I LPQ I L E I LK+T + +TIT+ EIF + R+ T Y+PL++ Sbjct: 175 RRIWLPQAINNVLPTLGGETILQLKATPLVATITVVEIFAVSSRVRQDTFVIYEPLLL-- 232 Query: 194 ELAFVYLILTSFCYIIQIKIESSV 217 LA VY+++ + +E+ V Sbjct: 233 -LALVYMVIAGLIALAFRWLENRV 255 >gi|323526381|ref|YP_004228534.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323383383|gb|ADX55474.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 237 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 11/195 (5%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S + +AV R+ ++ I +HFY +IFRGTPL VQL +I+ Sbjct: 21 SGLAVTLWLLVASLAFGFAMALPLAVARVS-TNRYIRTPVHFYTYIFRGTPLYVQLLLIY 79 Query: 79 YGLPHI----------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ I F I++ +LN AY +EI ++ S+ G+ +A+ A Sbjct: 80 TGIYSFEFIRSREITDAIFRSGFYCAIMAFSLNTCAYTTEIFAGAMRSMSHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+ R II+P + S S+E I +L +TSVA T T+P+I + A+ S TYQ Sbjct: 140 GMDGITLYRRIIIPSALRRSLPLYSNEVILMLHATSVAFTATVPDILKVARDANSATYQS 199 Query: 189 LIIYCELAFVYLILT 203 + A +YL ++ Sbjct: 200 FQAFGIAALLYLTIS 214 >gi|226323644|ref|ZP_03799162.1| hypothetical protein COPCOM_01419 [Coprococcus comes ATCC 27758] gi|225207828|gb|EEG90182.1| hypothetical protein COPCOM_01419 [Coprococcus comes ATCC 27758] Length = 228 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 13/191 (6%) Query: 7 NLIIDSFPQLLYA---AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 NLI+ P ++ A + TL + ++ V +L +G IA + + S + VW Sbjct: 2 NLIMKQMPVVVSALNVGFLQTLKLFIVTLVGALPLGLVIAFGSMSHFKPL-SWLARLIVW 60 Query: 64 IFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 + RGTPL++QL +I+Y P + G F+A +S +N++ Y SEI R I Sbjct: 61 VIRGTPLMIQLLIIYY-FPGLVLHNPIWGGGETGRFLAAAVSFIINYACYFSEIYRGGIQ 119 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +P+GQ +A +G+T+ Q I L Q I P+S+E I+++K TS+A I + EI Sbjct: 120 GVPEGQKEAGLVLGMTKHQIFFKITLLQMIKRIVPPMSNEIITLVKDTSLARIIALQEII 179 Query: 176 QTAQRIVSTTY 186 Q + ++ Sbjct: 180 WAGQAFMKGSH 190 >gi|308186223|ref|YP_003930354.1| Arginine transport system permease protein artM [Pantoea vagans C9-1] gi|308056733|gb|ADO08905.1| Arginine transport system permease protein artM [Pantoea vagans C9-1] Length = 222 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 97/175 (55%), Gaps = 12/175 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNF 102 +++ ++ ++ +F GTPLLVQ+F+I+YG P I ++ ++ +++L+LN Sbjct: 43 VLNPLVKGFITLFTGTPLLVQIFLIYYGPGQFPSIQQIPWLWHLLSQPWLCAMLALSLNS 102 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +++ ++ +IP GQW + A+G++RK T+R I+LP + S+E + + K Sbjct: 103 AAYTTQLFYGAVRAIPSGQWQSCAALGMSRKDTLR-ILLPYAFKRALSSYSNEVVLVFKG 161 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 TS+A TIT+ E+ Q + TY + +Y +YL + ++ IE Sbjct: 162 TSLAYTITLMEVMGHGQLLYGRTYD-ITVYAAAGLIYLCVNGLLTLMMRLIEKRA 215 >gi|320007607|gb|ADW02457.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces flavogriseus ATCC 33331] Length = 214 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 98/171 (57%), Gaps = 1/171 (0%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV 92 +++L++GF +A R+ ++ +I +V + R TPL + F + GLP G+V V Sbjct: 27 ILALVLGFVMASFRVAPVGSL-RVIGTVWVAVLRNTPLTLLFFAVLLGLPRFGLVLPFQV 85 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 +++L SA+I E +RS I ++P GQ +A+ ++G++ QT+ +++LPQ + P+ Sbjct: 86 FAVLALGCYTSAFICEALRSGINTVPTGQGEAARSLGMSFGQTLGNVVLPQAFRSVIPPV 145 Query: 153 SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 S I++ K++++A ++ E+ T + + Y + + +A YLI+T Sbjct: 146 GSTLIALAKNSAIAGAFSVTELLGTYKTLNELGYSIIWTFVWIAVGYLIIT 196 >gi|271502695|ref|YP_003335721.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270346250|gb|ACZ79015.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 248 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 108/198 (54%), Gaps = 21/198 (10%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ + Q L+ VTL IA + V++ + G +A R + + ++ Y +FR Sbjct: 15 LLAPQYLQWLWQGFQVTLGIAAATVVLATLSGLILAAGRDSGTRWLRWPVIA-YCALFRN 73 Query: 68 TPLLVQLFVIFYG------------------LPHIGIVFDSF--VAIIISLTLNFSAYIS 107 TPLLVQLF ++G +P +G+ SF +A + LTL +A+I+ Sbjct: 74 TPLLVQLFFWYFGAAQLLPEGAMQWLNRPHVIPLVGLDMPSFEFLAGLFGLTLYSAAFIA 133 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E +R+ I + +GQ A+ A+GLT Q +R+++LPQ + + PL ++++++K++S+A Sbjct: 134 EEVRAGIAGVARGQKYAACALGLTGWQAMRYVVLPQALRIALPPLLGQYMNVVKNSSLAM 193 Query: 168 TITIPEIFQTAQRIVSTT 185 I + E+ ++++ + T Sbjct: 194 AIGVAELSYASRQVETET 211 >gi|238897254|ref|YP_002922931.1| polar amino acid ABC transporter inner membrane subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465009|gb|ACQ66783.1| polar amino acid ABC transporter inner membrane subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 247 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 112/209 (53%), Gaps = 25/209 (11%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM-HFYVWIFRGTPLLVQLF 75 L+ ++TL I+ + + S ++G F+AV R SD +M Y +FR TPLLVQLF Sbjct: 21 LWDGFLITLYISVCTVIFSTLLGIFLAVARE--SDFKAQRVMVTCYCMLFRNTPLLVQLF 78 Query: 76 VIFYGL--------------PHIGIVFD--------SFVAIIISLTLNFSAYISEIIRSS 113 ++G PH ++F F++ +I LTL SA+I+E R+ Sbjct: 79 FWYFGSGQILPSSWMQWLNSPHELVIFYFTFHWPSFEFLSGLIGLTLYSSAFIAEEFRAG 138 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I + GQ +A+ A+GLT Q+++++I PQ + + PL +++ I+K++S+ I + E Sbjct: 139 IAGVGLGQKNAAQALGLTHWQSMKYVIFPQALKIALPPLLGQYMYIIKNSSLTMAIGVAE 198 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + ++++ + T + + F+Y++L Sbjct: 199 LSYASRQVETETLRTFQAFGVATFLYILL 227 >gi|15900609|ref|NP_345213.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|111658698|ref|ZP_01409341.1| hypothetical protein SpneT_02000206 [Streptococcus pneumoniae TIGR4] gi|14972185|gb|AAK74853.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|301793879|emb|CBW36274.1| putative amino-acid ABC transporter integral membrane protein [Streptococcus pneumoniae INV104] Length = 206 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 95/176 (53%), Gaps = 1/176 (0%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 IA + S ++G +++IR + +++ + Y+ + R TPLL+QLF +++GLP IGI Sbjct: 3 IAVWGILGSFLLGLIVSIIR-HYRILVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGI 61 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 V S V + L +Y++E RS + +I + Q + AIGLT Q +++LPQ Sbjct: 62 VLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAIGLTPLQVFYYVVLPQATA 121 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + S+ I ++K TSV S + + ++ A+ ++ Y+ I L YLI+ Sbjct: 122 VALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYETDIALAMLVVAYLIM 177 >gi|116254281|ref|YP_770119.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115258929|emb|CAK10038.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 270 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 108/196 (55%), Gaps = 23/196 (11%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF-VIFYGLPHIGIVF 88 ++FV++ ++G I ++ + S ++ I FY+ I RG P+LV LF V F G P + + Sbjct: 59 VAFVLATVLGLGICLLGMADSQ-VLRQIARFYIEIIRGIPILVLLFYVAFVGAPALVAAY 117 Query: 89 DSFVA---------------------IIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + ++ II+LT+ +S++I+EI R+ S+ GQ +A+ A Sbjct: 118 NFLISPLVTSGMAEPILVRDLSLMWRAIIALTVGYSSFIAEIFRAGFQSVDLGQIEAAKA 177 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL+R + R ++ PQ I PLS++F+S++K +S+ S + + +I Q + + +++ Sbjct: 178 LGLSRYRRFRSVVFPQAIRVIFPPLSNDFVSMVKDSSLVSVLGVADITQMGKVYAAGSFR 237 Query: 188 PLIIYCELAFVYLILT 203 Y + ++YLILT Sbjct: 238 FFETYSIVTYIYLILT 253 >gi|83593423|ref|YP_427175.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC 11170] gi|83576337|gb|ABC22888.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170] Length = 243 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 11/198 (5%) Query: 39 GFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDS--- 90 G I ++R S + L YV +FR PLLVQLF+ ++ LP + G+ Sbjct: 47 GGMIGIMRTLPSKGLQRLGAA-YVEVFRNIPLLVQLFLWYFVLPELLPPSWGLWLKQIPD 105 Query: 91 --FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 F ++ + SA ++E IR+ I ++P+GQ AS A+GLT QT R+I+LP + Sbjct: 106 APFYTSVVGIGCFTSARVAEQIRAGITTLPRGQAMASTALGLTLPQTYRYILLPMALRIV 165 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 PL+SEF++ +K+TSVA TI++ E+ + + ++Q + +Y+++ Sbjct: 166 LPPLTSEFLNTVKNTSVALTISLMELTARTRAMQEFSFQVFEAFAAATLIYVLINVVVVA 225 Query: 209 IQIKIESSVTQHTYSVDK 226 + IE V ++V K Sbjct: 226 VMRVIEHRVAVPGFNVGK 243 >gi|84496802|ref|ZP_00995656.1| putative glutamate transporter [Janibacter sp. HTCC2649] gi|84383570|gb|EAP99451.1| putative glutamate transporter [Janibacter sp. HTCC2649] Length = 223 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 111/203 (54%), Gaps = 9/203 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I+ ++ + A T+ +A +S + S+++G +AV+R+ I+ ++ +YV IFR T Sbjct: 4 ILATYGDDILKAFGGTILLAILSTIGSMVLGTIVAVLRLS-PVRILQMLGTWYVNIFRNT 62 Query: 69 PLLVQLFVIFYGLPHI-GIVFD-------SFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PL + + GL +I GI D +F ++ L++ A+I E +RS + ++P G Sbjct: 63 PLTLLMVFSILGLTYILGINLDPTDIQGNAFRWAVVVLSIYHGAFICEALRSGVNTVPLG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ AIGLT Q++R ++LPQ + P+ S I++ K+T+VA+ I + E Sbjct: 123 QAEAARAIGLTFGQSMREVLLPQAFRGAIAPIGSTIIALTKNTTVAAVIGVGEATNAMNV 182 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I+ + I+ A ++ILT Sbjct: 183 IIENEGSGITIFLIFALGFVILT 205 >gi|332716671|ref|YP_004444137.1| amino acid ABC transporter, permease protein [Agrobacterium sp. H13-3] gi|325063356|gb|ADY67046.1| amino acid ABC transporter, permease protein [Agrobacterium sp. H13-3] Length = 216 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 110/206 (53%), Gaps = 4/206 (1%) Query: 17 LYAA-IVVTLPIACISFVISLIIGFFIAV-IRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 LYAA + TL ++ +++IIG +A +R + +ISL + YV RG PL + L Sbjct: 11 LYAAGLFTTLTVSIAGIALAVIIGIVLAAALRSRY--MVISLPVRLYVEFARGAPLALIL 68 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F+ +YG P +G++ A I+ L L + +EI R+ ++P+G+ +A+ +G+T Sbjct: 69 FLFYYGGPQLGLILSPCAAGIVGLGLYGAGPFAEIFRAGFNAVPRGEIEAAGMLGITSGD 128 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 T HI +PQ + + + I+++K ++V S IT+ E+ + A I S T+ + Y Sbjct: 129 TFLHIQMPQALALTLPASVGQAINLVKESAVLSVITLSELTKVAGTISSITFAVVTPYLT 188 Query: 195 LAFVYLILTSFCYIIQIKIESSVTQH 220 +A +Y + + + +ES ++ Sbjct: 189 IALLYWAIVEILSRLGLYLESRLSTE 214 >gi|116334342|ref|YP_795869.1| ABC-type amino acid transport system, permease component [Lactobacillus brevis ATCC 367] gi|116099689|gb|ABJ64838.1| ABC-type amino acid transport system, permease component [Lactobacillus brevis ATCC 367] Length = 218 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 96/159 (60%), Gaps = 4/159 (2%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 +S I+ F + + R PL++ LF ++GLP++G+ D A I+++T+ S ++EI+RS Sbjct: 53 VSAIVGFIIDVIRNLPLILILFFTYFGLPNLGVKPDVIPAAILAMTIFESTMLAEIVRSG 112 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++ GQ + + A GLT Q + +I+LPQ + L S+FIS++K TS+A+ I +PE Sbjct: 113 IQAVDPGQMEGARANGLTYWQALWYIVLPQALVKMIPALVSQFISLVKDTSLATIILLPE 172 Query: 174 IFQTAQRIVSTTYQPLI-IYCELAFVYLILTSFCYIIQI 211 + +Q I +I ++ +A +Y I+ CY++ + Sbjct: 173 MLFRSQIIYGQNTNYIIPMFVAIAVMYFIV---CYLLSV 208 >gi|42522400|ref|NP_967780.1| polar amino acid transport system permease protein [Bdellovibrio bacteriovorus HD100] gi|39574932|emb|CAE78773.1| polar amino acid transport system permease protein [Bdellovibrio bacteriovorus HD100] Length = 247 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 106/201 (52%), Gaps = 30/201 (14%) Query: 3 YEWF--NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI---------FFSD 51 + WF ++II+ +P L + TL + I I+G F+ + +I + + Sbjct: 2 FSWFRTDIIIEYWP-LFMQGLATTLQLTLIGIFFGTILGLFLGLGKIARIERGPWRWPTH 60 Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGL------PHIGIV------------FDSFVA 93 + L Y+ FRGTPL VQ+ +I + L P G++ + + ++ Sbjct: 61 LFVRLPSQIYIGFFRGTPLFVQILLIHFALVPLLIHPEDGLLISGDMALYLKREYGALIS 120 Query: 94 IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS 153 ++L+LN +AYI+EI R+ I SI +GQ++A+ ++GL+ T++ II+PQ PL Sbjct: 121 GALALSLNSAAYIAEIFRAGIQSIDRGQFEAARSLGLSYFHTMKSIIIPQAFRRMLPPLG 180 Query: 154 SEFISILKSTSVASTITIPEI 174 +E I++LK +S+ S I + E+ Sbjct: 181 NEAITLLKDSSLVSAIGLAEL 201 >gi|256392977|ref|YP_003114541.1| polar amino acid ABC transporter inner membrane subunit [Catenulispora acidiphila DSM 44928] gi|256359203|gb|ACU72700.1| polar amino acid ABC transporter, inner membrane subunit [Catenulispora acidiphila DSM 44928] Length = 349 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 114/223 (51%), Gaps = 25/223 (11%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL----- 74 + +TL + +IG +A +R+ + + SL F VW+ R PLLVQL Sbjct: 95 GLELTLWLTAAVLAAGYLIGTGVAAMRLSPNPILKSLSFGF-VWLIRSLPLLVQLLFWYE 153 Query: 75 ---------FVIFYGLPHIGI----VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 F I +G G+ +F+ A I+LTL+ +A+ SE+IR I+++P GQ Sbjct: 154 IASLYPRLSFGIPFGPEFAGVKTAHLFNGVFAAFIALTLDVAAFSSELIRGGILAVPSGQ 213 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSE-FISILKSTSVASTITIPEIFQTAQR 180 +A+ A+GL + + R I+LPQ + S +P S I +LK+TSV S I + ++ + Q Sbjct: 214 VEAAQALGLGKGRIFRRIVLPQAM-PSIIPASGNLLIGMLKATSVISVIAVQDLLYSTQL 272 Query: 181 IVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 I + +Q PL++ L Y+ LT+ I Q +E + T Sbjct: 273 IYNENFQVIPLLLVATL--WYIALTTVLSIGQYFVERHYARGT 313 >gi|332288761|ref|YP_004419613.1| arginine transporter permease subunit ArtQ [Gallibacterium anatis UMN179] gi|330431657|gb|AEC16716.1| arginine transporter permease subunit ArtQ [Gallibacterium anatis UMN179] Length = 223 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 88/147 (59%), Gaps = 7/147 (4%) Query: 64 IFRGTPLLVQLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + RG P ++ + +IF+G L I F +F ++L + F+AY S+ +R +I + Sbjct: 55 LLRGLPEILVVLLIFFGSTQVLFLLTEEYIEFSAFWCGSVALAIIFAAYASQSLRGAIQA 114 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP GQW++ A+GL+R QT II+PQ + LS++++ +LK T++ S I + ++ + Sbjct: 115 IPVGQWESGAALGLSRAQTFVRIIMPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLMR 174 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 A+ + ++T+QP Y A +YL++T Sbjct: 175 QAELVNASTHQPFTWYGIAALLYLVIT 201 >gi|237730632|ref|ZP_04561113.1| glutamate/aspartate transport system permease [Citrobacter sp. 30_2] gi|226906171|gb|EEH92089.1| glutamate/aspartate transport system permease [Citrobacter sp. 30_2] Length = 246 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 118/214 (55%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++ +++I+ +IG ++R + +S I YV +FR PL+VQ F Sbjct: 25 LWSGFQVTVALSITAWIIAFLIGSLFGILRTV-PNRFLSGIGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P +IG+ F + F++ ++ L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVIPELLPENIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E + Sbjct: 204 YSAHAWESFTAITLAYVLINAVIMLVMNLVERKI 237 >gi|149926671|ref|ZP_01914931.1| ABC amino acid transporter, inner membrane subunit [Limnobacter sp. MED105] gi|149824600|gb|EDM83816.1| ABC amino acid transporter, inner membrane subunit [Limnobacter sp. MED105] Length = 246 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 103/177 (58%), Gaps = 13/177 (7%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 ++L++ ++ TL + ++ VI+ +G + V+R S ++ + + YV +FR PL+VQ Sbjct: 24 EMLFSGLLWTLATSAVAGVIAFTVGSLMGVLRTA-SSKPLAFLGNAYVELFRNIPLIVQF 82 Query: 75 FVIFYGLPHI-----------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 F+ ++ +P F F+A ++ L L ++ ++E ++S I+S+ +GQ Sbjct: 83 FLWYFVVPEFIPALKEWSIEQDPTFVQFLASVVCLGLFTASRVAEQVKSGILSLSRGQRA 142 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQ 179 A YA+GLT QT R ++LP P++SE ++++K++SVA TI + E+ F+T + Sbjct: 143 AGYALGLTEGQTYRFVLLPMAYRIIVPPMTSEAMNLIKNSSVALTIGLTELTFRTRE 199 >gi|86136435|ref|ZP_01055014.1| polar amino acid uptake family ABC transporter, permease protein [Roseobacter sp. MED193] gi|85827309|gb|EAQ47505.1| polar amino acid uptake family ABC transporter, permease protein [Roseobacter sp. MED193] Length = 258 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 67/243 (27%), Positives = 121/243 (49%), Gaps = 38/243 (15%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI----ISL 56 M+++W I + L + T+ I V++ ++GF +A I + + I +S Sbjct: 30 MRWDW----IPKYAPLALEGLWTTIWI----LVVTTVLGFLLA-IPLGLAQAIGPWYLSA 80 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI----------------IISLTL 100 + + RGTPLL+Q+++++YGL G +F F I +++LTL Sbjct: 81 PARAFCTVIRGTPLLLQIWLLYYGL---GSLFPQFPWIRSSELWPYLRQAWPYAVMALTL 137 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 +++ Y E++R + + KGQ +A+ + G+ R R I LPQ I L E I L Sbjct: 138 SYAGYEGEVMRGAFSGVAKGQLEAAKSFGMPRFTMFRRIWLPQAIRNVLPTLGGETILQL 197 Query: 161 KSTSVASTITIPEIFQTAQRIVSTT---YQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 K+T + +TIT+ EI+ + R+ S T Y+PL++ LA Y+++ + + E+ + Sbjct: 198 KATPLVATITVVEIYAVSSRVRSDTFIVYEPLLL---LALAYMVIAGLIGLAFKRFEARI 254 Query: 218 TQH 220 Q Sbjct: 255 PQR 257 >gi|292487614|ref|YP_003530486.1| putative glutamate/aspartate ABC transporter inner membrane protein [Erwinia amylovora CFBP1430] gi|292898853|ref|YP_003538222.1| glutamate/aspartate ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291198701|emb|CBJ45810.1| glutamate/aspartate ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291553033|emb|CBA20078.1| putative glutamate/aspartate ABC transport system, inner membrane component [Erwinia amylovora CFBP1430] gi|312171721|emb|CBX79979.1| putative glutamate/aspartate ABC transport system, inner membrane component [Erwinia amylovora ATCC BAA-2158] Length = 245 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/219 (26%), Positives = 115/219 (52%), Gaps = 14/219 (6%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 S+ L++ VT+ ++ +++I+L +G F ++R + S + YV +FR PL+ Sbjct: 20 SYLGWLWSGFQVTIAVSVCAWIIALCVGSFFGILRTV-PGRLFSSLGTCYVELFRNVPLI 78 Query: 72 VQLFVIFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIP 118 VQ F+ + +P IG F S F ++ L L +A + E +R++I S+P Sbjct: 79 VQFFIWYLVVPELLPEAIGTWFKSEIDPNIQFFTCSVLCLGLFTAARVCEQVRAAIQSLP 138 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A Sbjct: 139 SGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQA 198 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +++ + + + Y+ + + ++ +E V Sbjct: 199 GKLLDYSAHAYESFTAITLAYVAINAVIMLLMGLVERKV 237 >gi|330686403|gb|EGG98003.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU121] Length = 227 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 102/181 (56%), Gaps = 12/181 (6%) Query: 17 LYAAIVVTLPIACI----SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 L+ +V LPI I + +++ I+G + +IRI +S + Y R TPLL+ Sbjct: 9 LFNQVVQQLPITLIMIICALILATILGLILTIIRIK-QVPYLSTCVRIYQSFMRSTPLLL 67 Query: 73 QLFVIFYGLP------HIGIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 QLF++++ LP HI I FD II++ +L+ +AY+SE+ R+ +S+ Q +A Sbjct: 68 QLFLVYFALPQFLLIFHININHFDRLFFIILAFSLHSAAYLSEVFRAGYLSVDYRQIEAG 127 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++GL+ + ++ II+PQ + S L+++ I ++K TS+A TI I ++ Q I+ Sbjct: 128 LSVGLSYPRILKDIIIPQALRNSIPNLTTQIIELIKDTSLAFTIGIIDMMGQVQLIIGNN 187 Query: 186 Y 186 Y Sbjct: 188 Y 188 >gi|300868202|ref|ZP_07112834.1| Polar amino acid ABC transporter, inner membrane subunit [Oscillatoria sp. PCC 6506] gi|300333826|emb|CBN58018.1| Polar amino acid ABC transporter, inner membrane subunit [Oscillatoria sp. PCC 6506] Length = 478 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 122/218 (55%), Gaps = 11/218 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFYVW 63 F I+ + P +L I VTL +S + I G +++ +I TI +SL + Y Sbjct: 264 FGKILPNLPFIL-GGIWVTLTFTLLSAFLGFIWGIVLSLFKI---STIKPLSLFANGYTS 319 Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 IFRGTPL++QL ++++ P + G + A +I+ LN AYISE IR+ I ++ KGQ Sbjct: 320 IFRGTPLILQLTLVYFATPQLTGYNISALQAGVITFFLNSGAYISETIRAGIQAVDKGQK 379 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ ++G+ K + IILPQ + L +E I++LK +++ S I + ++ + A + Sbjct: 380 EAAESLGVPYKLMMGDIILPQALKNILPALVNESIALLKDSALVSVIGVEDLLRRATIVG 439 Query: 183 STTY---QPLIIYCELAFVYLI-LTSFCYIIQIKIESS 216 + Y +PLI + ++ ++ LT +++ +++SS Sbjct: 440 AEKYIYFEPLIFVGIIYYLMVLSLTWGANVLERRLQSS 477 >gi|148652492|ref|YP_001279585.1| polar amino acid ABC transporter inner membrane subunit [Psychrobacter sp. PRwf-1] gi|148571576|gb|ABQ93635.1| polar amino acid ABC transporter, inner membrane subunit [Psychrobacter sp. PRwf-1] Length = 248 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 14/188 (7%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP---- 82 I I+++++L IG + ++R S T + I YV FR PLLVQLF FY P Sbjct: 35 IGTIAWILALGIGTVLGIMRTLPSKTART-IGTMYVTFFRNIPLLVQLFFWFYVAPGWLT 93 Query: 83 -------HIGIV--FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 + G+ + ++ I L L +A I+E +R+ I S+P+GQ +A+YA+G + Sbjct: 94 PVLQEWWYKGLSPNMSAMISASIGLGLFTAARITEQVRTGIQSLPEGQHNAAYALGFSTA 153 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q R ++LPQ PLSSE + K+ S+AS + + E+ + I T + IY Sbjct: 154 QAYRQVLLPQAFRVILPPLSSELTNCYKNASIASLVGVMELISQTKTISEYTQNNIEIYT 213 Query: 194 ELAFVYLI 201 +YL+ Sbjct: 214 YATIIYLL 221 >gi|297194202|ref|ZP_06911600.1| amino acid ABC transporter transmembrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|197722543|gb|EDY66451.1| amino acid ABC transporter transmembrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 216 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 105/192 (54%), Gaps = 13/192 (6%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGF-----FIAVIRIFFSDTIIS 55 M ++W + I D P+ + +++TL + + +IS +G F A R F ++ Sbjct: 1 MTWDW-SAIADFMPRF-WDGVLITLQVLVLGSLISFTLGLVWAIAFRAPTR--FIRWPVN 56 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 L+ F R TPLLVQLF +++ LP G+ F + I++ L++S Y +++ R+ I Sbjct: 57 LVTEF----IRTTPLLVQLFFLYFVLPEWGVQFSALTTGTIAIGLHYSTYTAQVYRAGIE 112 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P GQW+A+ A+ L +T +ILPQ + L + I++LK T + + I + E+ Sbjct: 113 AVPPGQWEAATALSLPAHRTWIAVILPQAVRRITPALGNYVIAMLKDTPLLAAIGVLEML 172 Query: 176 QTAQRIVSTTYQ 187 Q ++ ++T+Q Sbjct: 173 QQSRLESASTFQ 184 >gi|91787283|ref|YP_548235.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91696508|gb|ABE43337.1| amino acid ABC transporter membrane protein 2, PAAT family [Polaromonas sp. JS666] Length = 228 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 111/207 (53%), Gaps = 4/207 (1%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIG-FFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P+L AA VT ++ F I+L++G +A+IR + +F++ R PLL Sbjct: 17 PRLAEAA-KVTAKLSSAGFAIALLLGAILVAMIRS--GRPALRFAANFFIQFVRTVPLLA 73 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 L +++ LP +GI F A II L L+ +AY++EI+R + SI +GQ +A+ A+GL Sbjct: 74 LLLALYFALPPLGITLPGFWAGIIGLGLHGAAYVAEILRGGLQSIHRGQREAALAVGLAP 133 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 Q H++ PQ + PL + ++++LK +S+ + I E+ TA+ + S + PL I+ Sbjct: 134 HQVFMHVVFPQALRVMLPPLLNTYVALLKDSSLCALIATDELMLTARAMSSEFFLPLHIF 193 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQ 219 + Y + ++ +E +++ Sbjct: 194 LLVGAFYFAIAFPLSMVSRALEKHLSR 220 >gi|256392946|ref|YP_003114510.1| polar amino acid ABC transporter inner membrane subunit [Catenulispora acidiphila DSM 44928] gi|256359172|gb|ACU72669.1| polar amino acid ABC transporter, inner membrane subunit [Catenulispora acidiphila DSM 44928] Length = 352 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/219 (26%), Positives = 113/219 (51%), Gaps = 20/219 (9%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF- 78 +VVTL + +S V+ L G +A+ R + +++L+ Y+W+FR PL+V L ++F Sbjct: 99 GLVVTLRVTALSAVLGLAGGVLLALARQS-RNPVLNLVSWLYIWVFRSVPLIVVLLILFN 157 Query: 79 ----YGLPHIGIVFD-------------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 Y +G+ F V + L+LN +AY +E++R+ ++S+ +GQ Sbjct: 158 FSALYKTLSLGVPFGPGFFHFDENRLATELVVATVGLSLNEAAYAAEVVRAGLLSVDQGQ 217 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++GL R R I+LPQ + ++ I ++K TS+ +++ ++F Q + Sbjct: 218 HEAAASLGLPRGYQFRRIVLPQALRAIVPAYVNQLIGLIKGTSLVFYVSLLDLFGQVQTM 277 Query: 182 VSTTYQPLIIYCELAFV-YLILTSFCYIIQIKIESSVTQ 219 ST ++ +A Y+ILTS +Q +E ++ Sbjct: 278 GSTYPADIVPLLLVATAWYVILTSVVSAVQFYVERRYSR 316 >gi|220905024|ref|YP_002480336.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869323|gb|ACL49658.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 222 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 97/179 (54%), Gaps = 5/179 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I + + L ++ + +P + FV +++G A F + + ++ I RG Sbjct: 11 LIPALNKGLLVSLALIIPAGSLGFVGGVLLGCARA-----FGPRWMRRLGDWFTAIVRGV 65 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLLVQL +I+Y LP +GI F + A + S L +AY SE +R +++SI +GQ A+ A+ Sbjct: 66 PLLVQLMMIYYALPKLGIYFPPYGAALTSFILCTAAYQSEYVRGALLSIRQGQIRAAQAL 125 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G + +T+ I++PQ + +E I ++K +S+A +T E+ + + S T++ Sbjct: 126 GFSTWKTVAWIVVPQAARRALPGCGNEIIYLIKYSSLAYFVTCMELMGEGKVVASDTFR 184 >gi|241206764|ref|YP_002977860.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860654|gb|ACS58321.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 270 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 108/196 (55%), Gaps = 23/196 (11%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF-VIFYGLPHIGIVF 88 ++FV++ ++G I ++ + S ++ I FY+ I RG P+LV LF V F G P + + Sbjct: 59 VAFVLATVLGLGICLLGMADSQ-VLRQIARFYIEIIRGIPILVLLFYVAFVGAPALVAAY 117 Query: 89 DSFVA---------------------IIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + ++ II+LT+ +S++I+EI R+ S+ GQ +A+ A Sbjct: 118 NFLISPLVTSGMAEPILVRDLSLMWRAIIALTVGYSSFIAEIFRAGFQSVDLGQIEAAKA 177 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL+R + R ++ PQ I PLS++F+S++K +S+ S + + +I Q + + +++ Sbjct: 178 LGLSRYRRFRSVVFPQAIRVIFPPLSNDFVSMVKDSSLVSVLGVADITQMGKVYAAGSFR 237 Query: 188 PLIIYCELAFVYLILT 203 Y + ++YLILT Sbjct: 238 FFETYSIVTYIYLILT 253 >gi|313498370|gb|ADR59736.1| Polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida BIRD-1] Length = 219 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 46/124 (37%), Positives = 75/124 (60%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + RG P+L+ L ++GLP G+ SF A I++L + +Y SEIIR + ++P+GQ + Sbjct: 60 VGRGGPVLILLQFFYFGLPTTGLTLSSFTASILALAWSTGSYTSEIIRGGLGAVPQGQRE 119 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +GL+ +R IILPQ + + PL + IL++TS+ TI +PE+ A I S Sbjct: 120 AARTLGLSSWDALRIIILPQGLRIALPPLLGFSLVILQTTSLCFTIALPELVGVANDIGS 179 Query: 184 TTYQ 187 T++ Sbjct: 180 ATFE 183 >gi|315124013|ref|YP_004066017.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017735|gb|ADT65828.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 233 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 20/200 (10%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I+ P L AA +T+ ++ + SLIIG F ++ +F I+ I Y+ Sbjct: 3 FDFILVQAPVFLTAA-WLTIKLSFFGIIFSLIIGLF-CILMSYFKIKILENICKLYIEFS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD------------------SFVAIIISLTLNFSAYIS 107 R TPLL+QLF ++Y LP I + SF I L+ +Y++ Sbjct: 61 RNTPLLIQLFFLYYALPKFNIHLEQIPPLDLICLSVEETLRPSFACAIAGLSFLGGSYMA 120 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E +R+ +I K Q++A ++G ++ +R++ILPQ + S +S+ I ++K TSV S Sbjct: 121 ESLRAGFEAIRKQQFEAGLSLGFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVS 180 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I +P++ + + S TY+ Sbjct: 181 IIALPDLVNLMKSLNSLTYK 200 >gi|262089613|gb|ACY24711.1| ABC ectoine/hydroxyectoine transporter EhuC permease protein [uncultured organism] Length = 219 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 91/161 (56%), Gaps = 2/161 (1%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH--IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y+ IFRGT LLVQLF +++ LP I +F I+ L L+ AY +E++R +I S+ Sbjct: 51 YIEIFRGTSLLVQLFWLYFVLPMPPFNIEMSAFTVAIVGLGLHIGAYGAEVMRGAIRSVA 110 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ++A+ A+ +T IILPQ + + P ++ I +LK+TS+ S IT+ ++ A Sbjct: 111 KGQYEAAQALNMTPFTRFNRIILPQALLAAIPPGTNLLIELLKNTSLVSLITLSDLAFRA 170 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 +++ T+ L I+ +Y ++ + +E +++ Sbjct: 171 RQLDQATFMTLEIFAMALLLYFVMAQAINLAMRMLERRLSR 211 >gi|293603255|ref|ZP_06685686.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292818344|gb|EFF77394.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 238 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 115/211 (54%), Gaps = 15/211 (7%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI------FFSDTII 54 +K W L+I +P +V TL +A IS ++L G +A+ RI ++ + + Sbjct: 5 LKDNWLLLLIGQYPHGPVGGLVATLGLAAISLALALPCGVLLALGRISPYRIFYWPSSAV 64 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 V++ RG PLL+ +F ++ +P I G ++++L SAY++EIIR+ Sbjct: 65 -------VYLVRGLPLLMFIFWAYFFVPLIIGRPVAGTTTMVVALVCYESAYLAEIIRAG 117 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++P GQ +AS A+GL+ QT+R +ILPQ + + S+F+S +K TS+A I++ E Sbjct: 118 IQALPPGQQEASRALGLSYMQTMRRVILPQALYNMLPSMLSQFVSTVKETSLAYVISVQE 177 Query: 174 IFQTAQRIVSTTY-QPLIIYCELAFVYLILT 203 + A +I S +P ++ LA Y IL Sbjct: 178 LTYAANQINSVLLTKPFQVFGLLALTYFILN 208 >gi|259502042|ref|ZP_05744944.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] gi|259170006|gb|EEW54501.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] Length = 488 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 94/166 (56%), Gaps = 2/166 (1%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +T+ + + V++L+ G + V+ + S + + I ++IFRG P++V F I+ GLP Sbjct: 293 MTIQLTVVGIVLALVFGLILGVLGVMQS-KVANAISSTVIYIFRGIPMIVLAFFIYMGLP 351 Query: 83 H-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + IG F+A +++L L+ AYI I++ ++ GQW+A+ ++GL ++ + ++ Sbjct: 352 NVIGHKVPLFLAGVVTLMLDEGAYIGAIVKGGFNAVDPGQWEAARSLGLPYRKALIKVVA 411 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 PQ I L ++FI LK TS+ S I + E+ QT I+S + Sbjct: 412 PQGIKIMVPSLVNQFIITLKDTSILSAIGVMELTQTGTVIISQNME 457 >gi|254382235|ref|ZP_04997596.1| glutamate transport system permease gluC [Streptomyces sp. Mg1] gi|194341141|gb|EDX22107.1| glutamate transport system permease gluC [Streptomyces sp. Mg1] Length = 214 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 54/196 (27%), Positives = 105/196 (53%), Gaps = 10/196 (5%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWI--FRGTPLLVQLFVIFYGLPHIGIVFDS 90 +++L++GF +A R+ + S + VW+ R TPL + F + GLP G+V Sbjct: 27 LLALVLGFLMASFRV---APVGSFRVFGTVWVTVLRNTPLTLLFFAVLLGLPRFGLVLPF 83 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 V +++L SA+I E++RS I ++P GQ +A+ ++G++ QT+ ++LPQ + Sbjct: 84 QVFAVLALGCYTSAFICEVLRSGINTVPTGQGEAARSLGMSFGQTLGSVVLPQAFRSVIP 143 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 P+ S I++ K++++A ++ E+ T + + Y + + +A YLI+T + Sbjct: 144 PIGSTLIALAKNSAIAGAFSVTELLGTYKTLNELGYSIVWTFVWIAVGYLIIT-----LS 198 Query: 211 IKIESSVTQHTYSVDK 226 I + V + Y V + Sbjct: 199 ISLLFHVLEKRYGVAR 214 >gi|326796876|ref|YP_004314696.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas mediterranea MMB-1] gi|326547640|gb|ADZ92860.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas mediterranea MMB-1] Length = 270 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 110/205 (53%), Gaps = 23/205 (11%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L ++ T+ + +F I+ I G FIA+ F I+ + FY+ I RG P+LV LF Sbjct: 42 LSQGLLTTVGVTFAAFSIASIAGLFIALAG-FSRHRIVREMSRFYIEIIRGVPVLVLLFY 100 Query: 77 I-FYGLPHIGIVFD------------------SFVAI---IISLTLNFSAYISEIIRSSI 114 I F G P I +++ F + I +L++++SA+I+E+ R+ I Sbjct: 101 IAFVGAPEIIKLYNWSLQYPIEQGWLEKARTRDFTLLWRAIFALSISYSAFIAEVFRAGI 160 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 + KGQ +A+ A+GL+ Q R IILPQ + PL ++F++++K +++ S + + +I Sbjct: 161 QEVSKGQIEAAQALGLSGWQRFRLIILPQAMRKILPPLGNDFVAMIKDSALVSVLGVQDI 220 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVY 199 Q + ++T+Q Y +AF+Y Sbjct: 221 TQLGKVYSASTFQFFETYNVVAFMY 245 >gi|297198908|ref|ZP_06916305.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sviceus ATCC 29083] gi|197711171|gb|EDY55205.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sviceus ATCC 29083] Length = 296 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 114/223 (51%), Gaps = 19/223 (8%) Query: 11 DSFPQLLYAA-IVVTLPIACISFVISLIIGFFIAVIR-----IFFSDTIISLIMHFYVWI 64 ++FP++L + V L + C V L++G IA+ R +FF + + Y Sbjct: 77 EAFPKVLEGLWLNVRLLLVC--GVAVLVLGMLIAIARTLRGPVFFP---LRFLAAAYTDF 131 Query: 65 FRGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 FRG PL++ L ++ G+P + G+ D + +LTL +SAY++E+ R+ I S+ Q Sbjct: 132 FRGLPLIINLMIVVLGVPALRLQGVTVDPVLLGGTALTLTYSAYVAEVFRAGIESVHPSQ 191 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 A+ ++GL+ +Q +R+++LPQ + PL ++ +S+ K T + S + + A I Sbjct: 192 RAAARSLGLSNRQALRYVVLPQAVRRQVPPLLNDLVSLQKDTGLVSIGGAIDAVRAADII 251 Query: 182 V--STTYQPLIIYCELAFVYLI--LTSFCYIIQIKIESSVTQH 220 V S Y P I+ L FV L +T F + +++ Q Sbjct: 252 VGRSLNYTPYIV-AGLVFVALTIPMTRFTDWVTARMDRRRAQG 293 >gi|229542364|ref|ZP_04431424.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus coagulans 36D1] gi|229326784|gb|EEN92459.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus coagulans 36D1] Length = 219 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 100/184 (54%), Gaps = 3/184 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W ++ +S P + +TL ++ + + ++G + I+ +F ++ ++ YV Sbjct: 2 DW-TVVQNSLP-MFEKGFWLTLRLSFFGIIGAGVLGLICSFIQ-YFKVPVLRKLVTAYVE 58 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + R TPLL+QLF +FYGLP +GI F + V II + +Y++E + + K Q + Sbjct: 59 LSRNTPLLIQLFFLFYGLPQVGIKFSAEVCGIIGIIFLGGSYMAEGFSGGLAGVSKTQIE 118 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 + AIGL+R Q R++I PQ + S ++ I ++K TS+ + + IPE+ TA ++ Sbjct: 119 SGLAIGLSRFQLARYVIFPQGLMLSVPAFAANIIFLIKETSIFTVLAIPELTNTALDLIG 178 Query: 184 TTYQ 187 Y Sbjct: 179 MYYN 182 >gi|50123385|ref|YP_052552.1| binding-protein-dependent transport system inner membrane component [Pectobacterium atrosepticum SCRI1043] gi|49613911|emb|CAG77364.1| binding-protein-dependent transport system inner membrane component [Pectobacterium atrosepticum SCRI1043] Length = 247 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 107/194 (55%), Gaps = 29/194 (14%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQ 73 L+ ++TL I+ + V+S ++GF +A R D+ I ++ Y +FR TPLLVQ Sbjct: 21 LWHGFLITLGISLGTVVLSTVLGFLLAAAR----DSQIHVLRGVVVAYSSLFRNTPLLVQ 76 Query: 74 LFVIFYGL--------------PHIGIVFDS--------FVAIIISLTLNFSAYISEIIR 111 LF ++G PH ++ + F+A + LTL SA+I+E IR Sbjct: 77 LFFWYFGAGQLFSSEVMQWLNTPHSISLWGATLAWPSFEFLAGLAGLTLYSSAFIAEEIR 136 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S I + +GQ A+ A+GLT Q++R+++LPQ + + PL ++++I+K++S+ I + Sbjct: 137 SGIRGVARGQKYAAQALGLTGWQSMRYVVLPQALKIALPPLLGQYMNIVKNSSLTMAIGV 196 Query: 172 PEIFQTAQRIVSTT 185 E+ ++++ + T Sbjct: 197 AELSYASRQVETET 210 >gi|187732192|ref|YP_001881130.1| histidine ABC transporter permease HisQ [Shigella boydii CDC 3083-94] gi|187429184|gb|ACD08458.1| histidine ABC transporter, permease protein HisQ [Shigella boydii CDC 3083-94] Length = 228 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V+++IIG A ++ + + LI Y + RG P L Sbjct: 4 GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLS-QNRLSELIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IF+GL +G I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFFGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G TR Q R I+ P + + + + + ILKST++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +T++P +YL+ T+ Sbjct: 183 AGKSTWEPFYFAIVCGVIYLVFTT 206 >gi|332529123|ref|ZP_08405087.1| polar amino acid ABC transporter inner membrane subunit [Hylemonella gracilis ATCC 19624] gi|332041346|gb|EGI77708.1| polar amino acid ABC transporter inner membrane subunit [Hylemonella gracilis ATCC 19624] Length = 240 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 96/169 (56%), Gaps = 9/169 (5%) Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V++ RGTPLL+ +F ++ LP + G D F ++I+L L AY++E++R+ I +P+G Sbjct: 67 VYVVRGTPLLMVVFWAYFFLPSVTGAKTDQFTTMLIALALFNGAYLAEVVRAGIQGLPRG 126 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQ 179 Q +++ ++GL+ Q +R +ILPQ + L S+F+ +K TS+ I + E+ F T+Q Sbjct: 127 QMESARSLGLSWLQAMRGVILPQALRNMLPSLVSQFVMTIKETSLGYIIGLNEVSFITSQ 186 Query: 180 RIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIESS---VTQHT 221 P+ +Y L Y + L+ F Y ++ ++E + QH+ Sbjct: 187 INTQVFVYPVQLYLILGLSYFVLCFSLSRFAYWMERRLERKARPIPQHS 235 >gi|320325613|gb|EFW81675.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] Length = 248 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 98/170 (57%), Gaps = 15/170 (8%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ IA ++++I+LI+G + V+R S ++S I YV IFR PLLVQLF+ ++ +P Sbjct: 32 TIAIAVVAWIIALILGSVLGVMRTVPSR-LVSGIATVYVEIFRNVPLLVQLFIWYFLVPD 90 Query: 84 I-------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + +F+++++ L L +A + E +R+ I +PKGQ A+ A+G Sbjct: 91 LLPENLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEVLPKGQESAARAMGF 150 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 Q +++LPQ PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 151 KLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|302023472|ref|ZP_07248683.1| ABC-type amino acid transport system, permease component [Streptococcus suis 05HAS68] Length = 165 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 45/115 (39%), Positives = 75/115 (65%) Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 II +++N AY+SE R+ I ++PKGQ +A+ ++G+ KQ +R++I+PQ IT L + Sbjct: 35 IIVISMNSGAYVSETDRAGINAVPKGQLEAANSLGIRPKQAMRYVIMPQAITNILPALGN 94 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYII 209 EF++I+K +S+ STI + E++ AQ + ST+Y PL YLI+T+ +I Sbjct: 95 EFVTIVKDSSLLSTIGVMELWNGAQTVQSTSYIPLTPLVFAESYYLIMTTVLTVI 149 >gi|253584218|ref|ZP_04861416.1| amino acid transport system permease [Fusobacterium varium ATCC 27725] gi|251834790|gb|EES63353.1| amino acid transport system permease [Fusobacterium varium ATCC 27725] Length = 241 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 52/146 (35%), Positives = 87/146 (59%), Gaps = 3/146 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLT--LNFSAYISEIIRSSIISIP 118 YV + RGTP +VQL +I L +G + D+ + +I L+ +N AY++EIIR+ I + Sbjct: 80 YVDLIRGTPAVVQL-MILANLIFVGALRDTPILVIAGLSFGINSGAYVAEIIRAGIEGLD 138 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A+ A+G+ ++ II+PQ + L SEFI++LK TS+ I ++ ++A Sbjct: 139 KGQMEAARALGMPYGIAMKEIIIPQAVKKILPALVSEFITLLKETSIVGFIGGVDLLRSA 198 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTS 204 I S TY+ + + +YL+LT+ Sbjct: 199 NIITSQTYRGVEPLLAVGLIYLVLTA 224 >gi|258406275|ref|YP_003199017.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] gi|257798502|gb|ACV69439.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] Length = 234 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 60/224 (26%), Positives = 119/224 (53%), Gaps = 12/224 (5%) Query: 5 WFNL---IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 W N+ +I +P + +++ +A + +G ++R+ I L Y Sbjct: 10 WENMDYFLIGPYPDGPLGGLAMSILLALGGIFGAFWVGLVFGLMRLS-KKAIFRLPALVY 68 Query: 62 VWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + I RGTPLL+ +F ++ P G + +I+ + SAY++EI+R+ + S+PKG Sbjct: 69 IEIIRGTPLLMVIFWFYFLAPIAFGKPLPEAASALIAFIVFTSAYVAEIVRAGVQSLPKG 128 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ GL+ Q++++IILPQ + ++F+S+ K TS+A I + E+ +TA + Sbjct: 129 QMEAARGSGLSHVQSMQYIILPQALRNMIPSFVNQFVSLTKDTSLAYIIGVNELTRTATQ 188 Query: 181 IVSTTY-QPLIIYCELAFVYLILTSFCYIIQI---KIESSVTQH 220 + + T P I+ +A +Y ++ CY++ K+E ++++ Sbjct: 189 VNNRTLIAPTEIFITIALIYFVV---CYVLTALSRKLERQMSRY 229 >gi|170734678|ref|YP_001773792.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169820716|gb|ACA95297.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 255 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 70/228 (30%), Positives = 127/228 (55%), Gaps = 21/228 (9%) Query: 9 IIDS-FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 ++D+ P+LL AA+ TL + +S S+++G +A+ T + ++ + RG Sbjct: 8 LLDTVMPKLL-AAVPTTLALTFLSGAASVLLGVPLALA-AGARHTPLRWSARGWLMLIRG 65 Query: 68 TPLLVQLFVIFYGLPHI------------GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 TPLLVQL++++YG I ++ D+F I++L++N SAY++ I+R +I Sbjct: 66 TPLLVQLYLLYYGFGQIVPREWMRDSWASPLLRDAFWYAIVALSVNESAYVATILRGAIA 125 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +P G+ +A +A G+TR Q +R I+ P+ + L+ E I +LKST +AST+T+ ++ Sbjct: 126 GVPAGEIEAGHAYGMTRMQVLRRIVGPRAWRLALPALTGEAILLLKSTVLASTVTVFDVM 185 Query: 176 QTAQRIVSTT---YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TA + T Y+PL A VY++L + I ++E + ++ Sbjct: 186 GTANTLRFETLRVYEPL---AGAAIVYVVLVALLTIPAARLEQRINRY 230 >gi|209551328|ref|YP_002283245.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537084|gb|ACI57019.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 270 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 112/206 (54%), Gaps = 23/206 (11%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF-VIF 78 + +T+ + ++FV++ ++G I ++ + S I I FY+ I RG P+LV LF V F Sbjct: 49 GVGITVFVTLVAFVLATVLGLGICLLGMADSQ-IARQIARFYIEIIRGIPILVLLFYVAF 107 Query: 79 YGLPHIGIVFDSFVA---------------------IIISLTLNFSAYISEIIRSSIISI 117 G P + ++ ++ II+LT+ +S++I+EI R+ S+ Sbjct: 108 VGAPALVAGYNFLISPLVSSGMAEPILVRDLSLMWRAIIALTIGYSSFIAEIFRAGFQSV 167 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQ +A+ A+GL+R + R ++ PQ I PLS++F+S++K +S+ S + + +I Q Sbjct: 168 DLGQIEAAKALGLSRYRRFRSVVFPQAIRVIFPPLSNDFVSMVKDSSLVSVLGVADITQM 227 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 + + +++ Y + ++YLILT Sbjct: 228 GKVYAAGSFRFFETYSIVTYIYLILT 253 >gi|237732341|ref|ZP_04562822.1| histidine transport system permease hisQ [Citrobacter sp. 30_2] gi|226907880|gb|EEH93798.1| histidine transport system permease hisQ [Citrobacter sp. 30_2] Length = 228 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V++++IG A ++ S + LI Y + RG P L Sbjct: 4 GFSGVILQGAIVTLELALSSVVLAVLIGLVGAAAKLSQSRAM-GLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL IGI D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNTITDAIGIGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G T Q R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T++P +YL+ T+ + + +E + D Sbjct: 183 AGKSTWEPFYFAVVCGVIYLVFTTVSNGVLLYLERRYSVGVKRAD 227 >gi|238893922|ref|YP_002918656.1| arginine transporter permease subunit ArtM [Klebsiella pneumoniae NTUH-K2044] gi|238546238|dbj|BAH62589.1| arginine 3rd transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 222 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 52/171 (30%), Positives = 97/171 (56%), Gaps = 12/171 (7%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYI 106 I+ Y+ +F GTPLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY Sbjct: 47 IVRGYITLFTGTPLLVQIFLIYYGPGQFPSLQEYPWLWHLISEPWLCALIALSLNSAAYT 106 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +++ +I +IP GQW + A+G+++K T+ I+LP + S+E + + KSTS+A Sbjct: 107 TQLFYGAIRAIPDGQWQSCSALGMSKKDTL-AILLPYAFKRALSSYSNEVVLVFKSTSLA 165 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 TIT+ E+ Q + TY ++++ +YLI+ ++ +E Sbjct: 166 YTITLMEVMGHGQLLYGRTYD-VMVFGAAGIIYLIVNGLLTLLMRLVERKA 215 >gi|22127992|ref|NP_671415.1| ABC transporter permease [Yersinia pestis KIM 10] gi|45443740|ref|NP_995279.1| ABC transporter permease [Yersinia pestis biovar Microtus str. 91001] gi|51598240|ref|YP_072431.1| ABC amino acid transporter, permease subunit [Yersinia pseudotuberculosis IP 32953] gi|108810145|ref|YP_654061.1| ABC transporter permease [Yersinia pestis Antiqua] gi|108814127|ref|YP_649894.1| ABC transporter permease [Yersinia pestis Nepal516] gi|145601163|ref|YP_001165239.1| ABC transporter permease [Yersinia pestis Pestoides F] gi|150260956|ref|ZP_01917684.1| ABC transporter permease [Yersinia pestis CA88-4125] gi|162421222|ref|YP_001608460.1| polar amino acid ABC transporter permease [Yersinia pestis Angola] gi|165926152|ref|ZP_02221984.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939972|ref|ZP_02228509.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|166009637|ref|ZP_02230535.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166213221|ref|ZP_02239256.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167401564|ref|ZP_02307058.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422869|ref|ZP_02314622.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425464|ref|ZP_02317217.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468127|ref|ZP_02332831.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis FV-1] gi|170026442|ref|YP_001722947.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186897481|ref|YP_001874593.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|218931086|ref|YP_002348961.1| ABC transporter permease [Yersinia pestis CO92] gi|229839818|ref|ZP_04459977.1| ABC transporter permease [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841903|ref|ZP_04462059.1| ABC transporter permease [Yersinia pestis biovar Orientalis str. India 195] gi|229896780|ref|ZP_04511943.1| ABC transporter permease [Yersinia pestis Pestoides A] gi|229904668|ref|ZP_04519779.1| ABC transporter permease [Yersinia pestis Nepal516] gi|270488379|ref|ZP_06205453.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294505633|ref|YP_003569695.1| ABC transporter permease [Yersinia pestis Z176003] gi|21961138|gb|AAM87666.1|AE014013_11 putative glutamate/aspartate ABC transport system permease protein [Yersinia pestis KIM 10] gi|45438610|gb|AAS64156.1| ABC transporter permease [Yersinia pestis biovar Microtus str. 91001] gi|51591522|emb|CAH23194.1| ABC amino acid transporter, permease subunit [Yersinia pseudotuberculosis IP 32953] gi|108777775|gb|ABG20294.1| ABC transporter permease [Yersinia pestis Nepal516] gi|108782058|gb|ABG16116.1| ABC transporter permease [Yersinia pestis Antiqua] gi|115349697|emb|CAL22678.1| ABC transporter permease [Yersinia pestis CO92] gi|145212859|gb|ABP42266.1| ABC transporter permease [Yersinia pestis Pestoides F] gi|149290364|gb|EDM40441.1| ABC transporter permease [Yersinia pestis CA88-4125] gi|162354037|gb|ABX87985.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis Angola] gi|165912098|gb|EDR30738.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|165922012|gb|EDR39189.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165991559|gb|EDR43860.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205519|gb|EDR49999.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166958261|gb|EDR55282.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048946|gb|EDR60354.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055478|gb|EDR65271.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752976|gb|ACA70494.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186700507|gb|ACC91136.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|229678786|gb|EEO74891.1| ABC transporter permease [Yersinia pestis Nepal516] gi|229691242|gb|EEO83295.1| ABC transporter permease [Yersinia pestis biovar Orientalis str. India 195] gi|229696184|gb|EEO86231.1| ABC transporter permease [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700218|gb|EEO88254.1| ABC transporter permease [Yersinia pestis Pestoides A] gi|262363798|gb|ACY60519.1| ABC transporter permease [Yersinia pestis D106004] gi|262367734|gb|ACY64291.1| ABC transporter permease [Yersinia pestis D182038] gi|270336883|gb|EFA47660.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294356092|gb|ADE66433.1| ABC transporter permease [Yersinia pestis Z176003] gi|320017442|gb|ADW01014.1| ABC transporter permease [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 245 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 109/203 (53%), Gaps = 29/203 (14%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWI 64 L+ + L+ ++TL I+ + V + ++GF +A R D+ + + F Y + Sbjct: 10 LLAPQYLGWLWDGFLLTLWISACTVVAATLLGFLLAAAR----DSELKALKGFAIGYSAL 65 Query: 65 FRGTPLLVQLFVIFYGL--------------PH----IGIVFD----SFVAIIISLTLNF 102 FR TPLL+QLF ++ PH G+ F+A + LTL Sbjct: 66 FRNTPLLIQLFFWYFAASQFLPASWIPWLNTPHEITLAGLTLAWPSFEFLAGFVGLTLYS 125 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +A+I+E +R+ I + KGQ A++A+GLT Q++R+++LPQ + + PL ++++I+K+ Sbjct: 126 TAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMRYVVLPQALKIAMPPLLGQYMNIIKN 185 Query: 163 TSVASTITIPEIFQTAQRIVSTT 185 +S+A I + E+ ++++ + T Sbjct: 186 SSLAMAIGVAELSYASRQVETET 208 >gi|313498369|gb|ADR59735.1| Polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida BIRD-1] Length = 178 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 50/150 (33%), Positives = 84/150 (56%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 R P +V LF IF+ + FVA II L L SA ++EI R ++ ++PKGQ++A Sbjct: 20 LRSIPPIVWLFFIFFAFSQYVVQLSPFVAAIIGLALITSANMAEIYRGALSAVPKGQYEA 79 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + +GL+ Q H+I+PQ + S S+ I +LK T++ASTI + E+ Q A I Sbjct: 80 TKVLGLSTWQKYVHVIVPQVVRISVPAASTYCIGLLKDTAIASTIGVSELAQVANHISQE 139 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 T++ L +Y +Y ++ F ++ +++ Sbjct: 140 TFRGLSVYAIAGLLYFAVSVFMALLSRQLD 169 >gi|312961372|ref|ZP_07775877.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311285030|gb|EFQ63606.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 220 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 102/187 (54%), Gaps = 1/187 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+A ++ + ++ V +IG F ++ + + + YV + RGTP+ V + Sbjct: 18 LWAGFQTSIYCSALAIVFGTLIGIFAGLV-LTYGTFWMRAPFRLYVDLIRGTPVFVLVLA 76 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 FY LP +G +F A + LTL +++SEI+R ++ +IP+GQ +A AIGLT Q++ Sbjct: 77 CFYMLPALGWQITAFQAGAVGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLTFPQSL 136 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +++LPQ + + I+K++++ S I + E+ + Q++++ T+ L Y Sbjct: 137 AYVLLPQALRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAG 196 Query: 197 FVYLILT 203 F++ ++ Sbjct: 197 FMFFVIN 203 >gi|161525298|ref|YP_001580310.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189349964|ref|YP_001945592.1| polar amino acid transporter permease [Burkholderia multivorans ATCC 17616] gi|221201396|ref|ZP_03574435.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia multivorans CGD2M] gi|221208877|ref|ZP_03581875.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221214042|ref|ZP_03587015.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|160342727|gb|ABX15813.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189333986|dbj|BAG43056.1| polar amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] gi|221166219|gb|EED98692.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|221171333|gb|EEE03782.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221178664|gb|EEE11072.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia multivorans CGD2M] gi|325524871|gb|EGD02818.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Burkholderia sp. TJI49] Length = 237 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 105/196 (53%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S + + +AV R+ +S+ + FY ++FRGTPL VQL +++ Sbjct: 21 SGLAVTLWLLVASISLGFVCAVPLAVARVS-KKKWVSMPVRFYTYVFRGTPLYVQLLLMY 79 Query: 79 YGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D+F I++ LN AY +EI +I +IP G+ +A+ A Sbjct: 80 TGMYSLEFVRSHSLLDAFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G+T R +ILP + A+PL S+E I +L +T+VA T T+P+I + A+ S TY Sbjct: 140 GMTPFTMYRRVILPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYM 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL ++ Sbjct: 199 AFQSFGIAALIYLAVS 214 >gi|70732197|ref|YP_261953.1| ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68346496|gb|AAY94102.1| probable permease of ABC transporter PA1341 [Pseudomonas fluorescens Pf-5] Length = 248 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 100/170 (58%), Gaps = 15/170 (8%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ IA ++++I+L++G + V+R + ++S I YV IFR PLLVQLF+ ++ +P Sbjct: 32 TIAIAVVAWIIALLLGSILGVMRTV-PNRLVSGIATVYVEIFRNVPLLVQLFIWYFLVPD 90 Query: 84 I-------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + +++++++ L L +A + E +R+ I ++P+GQ A+ A+G Sbjct: 91 LLPENLQEWYKQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQALPRGQESAARAMGF 150 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 + Q +++LPQ PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 151 SLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|327192285|gb|EGE59250.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 220 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 54/158 (34%), Positives = 90/158 (56%), Gaps = 3/158 (1%) Query: 33 VISLIIGFFIAVIRIF--FSDTIISLI-MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 VIS++IG I ++ F S + +L+ YV + R P+LV + F+ LP +G+ D Sbjct: 29 VISILIGAAIGLVVAFALISRSRFALVPARVYVTVIRNLPILVLVLFAFFALPQMGLRLD 88 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 + ++ L+L AY++E+ R+ ++SIP+G +A AIGLT Q II P + Sbjct: 89 KMKSFVLVLSLYSGAYLAEVFRAGLLSIPRGLTEAGLAIGLTGMQIRSSIIAPLMLRNVL 148 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 LSS IS+ K TS+A+ I +PE+ A++I +++ Sbjct: 149 PSLSSTIISLFKDTSLAAAIAVPELTFAARKINVESFR 186 >gi|150376685|ref|YP_001313281.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150031232|gb|ABR63348.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 219 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 103/187 (55%), Gaps = 1/187 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ + +++ I+ +S V ++G F+ + + + + I+ Y RGTP+LV + Sbjct: 16 LFKGLGISVSISFLSIVAGTVLGVFVG-LALVYGYRPVRWIVRGYTDFIRGTPVLVLVLA 74 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +Y L IGI F A +++L + S+++ E++R ++ SIPKGQ +A+ AIGLT QT Sbjct: 75 SYYVLSAIGIDLGPFQAGVLALAVFCSSHVGELVRGALQSIPKGQTEAAKAIGLTFAQTF 134 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +++ PQ + + + ++K++++ S I + E+ Q ++S T+ L Y Sbjct: 135 AYVLGPQALRQALPAWVNTAAEMVKASTLLSIIGVGELLLRTQEVISRTFMSLEFYFFAG 194 Query: 197 FVYLILT 203 F+Y ++ Sbjct: 195 FLYFVIN 201 >gi|92112665|ref|YP_572593.1| amino acid ABC transporter permease [Chromohalobacter salexigens DSM 3043] gi|91795755|gb|ABE57894.1| amino acid ABC transporter membrane protein 2, PAAT family [Chromohalobacter salexigens DSM 3043] Length = 243 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 24/220 (10%) Query: 1 MKYEWFNLIIDSFPQ-LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M + W D F Q L+ V TL + +S V + AV R+ + L+ Sbjct: 1 MDFSWLT---DPFYQKALWTGFVNTLWLVAVSAVCGFALAVVFAVTRLRGPRPLAMLVTG 57 Query: 60 FYVWIFRGTPLLVQLFVIFYG----LPHIG---------IVFDSFVAIIISLTLNFSAYI 106 + RGTPLLVQLF + G LP I ++ D F ++ TL+ AY Sbjct: 58 VTT-VVRGTPLLVQLFFFYDGVGRLLPEIPGVRESLIWPLLRDPFFYGALTFTLSVGAYT 116 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 E++R +++S+P+G+ A A GL R Q + + LP+ I L+ E I +LKS + Sbjct: 117 GEVLRGALLSVPEGELAAGRAFGLNRWQILYRLWLPRAIQMCLPTLTGELILLLKSVPLV 176 Query: 167 STITIPEIFQTAQRIVSTT---YQPLIIYCELAFVYLILT 203 STI + ++ + A + T Y+PL++ +A +YL LT Sbjct: 177 STIALMDLLKAANMVRDETFLVYEPLLL---IAGIYLALT 213 >gi|283784425|ref|YP_003364290.1| glutamate/aspartate ABC transporter permease [Citrobacter rodentium ICC168] gi|282947879|emb|CBG87441.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter rodentium ICC168] Length = 246 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 116/214 (54%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ VT+ ++ +++I+ ++G ++R + +S I YV +FR PL+VQ F Sbjct: 25 LWNGFQVTVALSITAWIIAFLVGSLFGILRTV-PNRFLSGIGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPHI-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P + G+ F + F++ +I L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVVPELLPEDLGMWFKAELDPNIQFFLSSMICLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 204 YSAHAWESFTAITLAYVLINAVIMLVMTLVERKV 237 >gi|332526681|ref|ZP_08402783.1| polar amino acid ABC transporter inner membrane subunit [Rubrivivax benzoatilyticus JA2] gi|332111084|gb|EGJ11116.1| polar amino acid ABC transporter inner membrane subunit [Rubrivivax benzoatilyticus JA2] Length = 250 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 19/144 (13%) Query: 61 YVWIFRGTPLLVQLFVIFYGL------PHIGIV------------FDSFVAIIISLTLNF 102 YV FRGTPL VQ+ ++ + L P G++ +F++ ++L+LN Sbjct: 71 YVTFFRGTPLFVQILLVHFALMPALVHPDHGLLISGETARMFRQEHGAFLSGCVALSLNA 130 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AYISEI R+ I+SI +GQ A+Y++GLT Q +R+++LPQ L +E ++++K Sbjct: 131 GAYISEIFRAGILSIHRGQTQAAYSVGLTHAQAMRYVVLPQAFRRMVPALVNEGVTLIKD 190 Query: 163 TSVASTITIPEIFQTAQRIVSTTY 186 +S+ S I + E+ A R V+ Y Sbjct: 191 SSLVSAIGLAEL-ALAARTVAGAY 213 >gi|332285054|ref|YP_004416965.1| glutamate/aspartate transport system permease protein [Pusillimonas sp. T7-7] gi|330429007|gb|AEC20341.1| glutamate/aspartate transport system permease protein [Pusillimonas sp. T7-7] Length = 196 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 13/183 (7%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY----------GLP 82 ++ + +G +A+ R+F +SL FYV +FR PL++ +F F+ G P Sbjct: 2 MLGIALGVVLALARLF-GPRWVSLAAAFYVNLFRAIPLILTIFWFFFLVPFVLRAVTGNP 60 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + G+ A + + L +AY EI+R+ I S+ KGQ A+ A+GLTR Q +RH++LP Sbjct: 61 YAGV--GPIYAALSAFVLAEAAYYCEIVRAGINSVRKGQMQAAIALGLTRWQALRHVVLP 118 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q L ++ I++LK TS+ I++ + A ++ + +Y +A YL L Sbjct: 119 QAFHNMTPSLINQTIALLKDTSLVYVISLNDFLGAATKVAHRDGTLVEMYLFVAVTYLAL 178 Query: 203 TSF 205 SF Sbjct: 179 CSF 181 >gi|300173758|ref|YP_003772924.1| glutamine-binding protein/glutamine transport system permease [Leuconostoc gasicomitatum LMG 18811] gi|299888137|emb|CBL92105.1| Glutamine-binding protein / Glutamine transport system permease protein [Leuconostoc gasicomitatum LMG 18811] Length = 477 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 50/142 (35%), Positives = 81/142 (57%), Gaps = 1/142 (0%) Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 ++IFRG PL+V F I+ GLP + G+ +F A II+L LN AY +R ++ +G Sbjct: 320 IYIFRGLPLMVLAFFIYIGLPGVTGVKIPAFTAGIITLILNEGAYTGAFVRGGFEAVNRG 379 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++GL +R +I+PQ + ++FI LK TS+ S I + E+ QT Sbjct: 380 QMEAARSLGLPYGSAMRRVIMPQGLRIMVPSFINQFIITLKDTSILSAIGLLELTQTGTL 439 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 IV+ Q ++ +A +YLI+ Sbjct: 440 IVARNSQGFRVWAIIAVIYLIV 461 >gi|86360504|ref|YP_472392.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86284606|gb|ABC93665.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 230 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 101/174 (58%), Gaps = 14/174 (8%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A+ +TL +A FV+S IIG A++ + L++ + V F+G P++V +F+ + Sbjct: 16 GAVPLTLAMALAIFVLSTIIGSLFAMVEYRRVPVLRQLVVAYKVA-FKGVPMVVVIFLAY 74 Query: 79 YGLPH--------IGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 YGLP +G+ ++ ++V +I++LT +A+ +E+++ ++ S GQ DA+ Sbjct: 75 YGLPSALQFLTSLVGVEYNGHSTPNWVTLIVALTACVAAFQAEVVKGALNSFDTGQADAA 134 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Y++G ++Q R ++LPQ I + L++ F+ I+K+ S+ I + +IF +Q Sbjct: 135 YSLGYKKRQLFRRVMLPQVIVAAIPDLANSFMVIMKALSLGFAIEVVDIFAQSQ 188 >gi|22125569|ref|NP_668992.1| glutamine ABC transporter permease [Yersinia pestis KIM 10] gi|45442118|ref|NP_993657.1| glutamine ABC transporter permease [Yersinia pestis biovar Microtus str. 91001] gi|51596868|ref|YP_071059.1| glutamine ABC transporter permease protein [Yersinia pseudotuberculosis IP 32953] gi|108808000|ref|YP_651916.1| glutamine ABC transporter permease [Yersinia pestis Antiqua] gi|108812270|ref|YP_648037.1| glutamine ABC transporter permease protein [Yersinia pestis Nepal516] gi|145599205|ref|YP_001163281.1| glutamine ABC transporter permease protein [Yersinia pestis Pestoides F] gi|149365578|ref|ZP_01887613.1| putative glutamine transport system permease [Yersinia pestis CA88-4125] gi|153949155|ref|YP_001400472.1| glutamine ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|162420264|ref|YP_001606263.1| glutamine ABC transporter permease [Yersinia pestis Angola] gi|165925600|ref|ZP_02221432.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165937741|ref|ZP_02226303.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|166008576|ref|ZP_02229474.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|167399647|ref|ZP_02305171.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422284|ref|ZP_02314037.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426964|ref|ZP_02318717.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170023840|ref|YP_001720345.1| glutamine ABC transporter permease [Yersinia pseudotuberculosis YPIII] gi|218929602|ref|YP_002347477.1| glutamine ABC transporter permease [Yersinia pestis CO92] gi|229838047|ref|ZP_04458206.1| glutamine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895246|ref|ZP_04510420.1| glutamine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|229898607|ref|ZP_04513752.1| glutamine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229902606|ref|ZP_04517723.1| glutamine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|270490213|ref|ZP_06207287.1| glutamine ABC transporter permease protein [Yersinia pestis KIM D27] gi|294504265|ref|YP_003568327.1| glutamine ABC transporter permease component [Yersinia pestis Z176003] gi|21958472|gb|AAM85243.1|AE013770_9 inner membrane permease [Yersinia pestis KIM 10] gi|45436981|gb|AAS62534.1| putative glutamine transport system permease [Yersinia pestis biovar Microtus str. 91001] gi|51590150|emb|CAH21787.1| ABC glutamine transporter, permease subunit glnP [Yersinia pseudotuberculosis IP 32953] gi|108775918|gb|ABG18437.1| glutamine transport system permease [Yersinia pestis Nepal516] gi|108779913|gb|ABG13971.1| putative glutamine transport system permease [Yersinia pestis Antiqua] gi|115348213|emb|CAL21141.1| putative glutamine transport system permease [Yersinia pestis CO92] gi|145210901|gb|ABP40308.1| glutamine transport system permease [Yersinia pestis Pestoides F] gi|149291991|gb|EDM42065.1| putative glutamine transport system permease [Yersinia pestis CA88-4125] gi|152960650|gb|ABS48111.1| glutamine ABC transporter, permease protein [Yersinia pseudotuberculosis IP 31758] gi|162353079|gb|ABX87027.1| glutamine ABC transporter, permease protein [Yersinia pestis Angola] gi|165914491|gb|EDR33106.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|165922709|gb|EDR39860.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165992958|gb|EDR45259.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166958790|gb|EDR55811.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167052151|gb|EDR63559.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054066|gb|EDR63894.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750374|gb|ACA67892.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|229680053|gb|EEO76152.1| glutamine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|229688155|gb|EEO80226.1| glutamine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229694413|gb|EEO84460.1| glutamine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701732|gb|EEO89757.1| glutamine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|262362384|gb|ACY59105.1| glutamine ABC transporter permease component [Yersinia pestis D106004] gi|262366308|gb|ACY62865.1| glutamine ABC transporter permease component [Yersinia pestis D182038] gi|270338717|gb|EFA49494.1| glutamine ABC transporter permease protein [Yersinia pestis KIM D27] gi|294354724|gb|ADE65065.1| glutamine ABC transporter permease component [Yersinia pestis Z176003] gi|320014657|gb|ADV98228.1| glutamine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 218 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 88/141 (62%), Gaps = 1/141 (0%) Query: 64 IFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTP++VQ+ I++ LP I + D F A ++++ +N AYI+EI R +++SI G Sbjct: 61 LIRGTPIVVQVMFIYFALPMMIPLRIDPFSAAVVTIIINSGAYIAEITRGAVLSIHSGFR 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A A+GL+++ T+ ++I P + PL +++I +K TS+ I + E+ + Q I+ Sbjct: 121 EAGLALGLSQRGTLLYVIAPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEII 180 Query: 183 STTYQPLIIYCELAFVYLILT 203 + ++ + I+ +A +YLI+T Sbjct: 181 AGNFRAMEIWSAVAVIYLIIT 201 >gi|330984857|gb|EGH82960.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] Length = 242 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 108/206 (52%), Gaps = 12/206 (5%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + F LL +T+ +A +S +S+++G A ++ S ++ + Y + RG P Sbjct: 16 LKGFGPLLLEGTWMTIKLAVLSLALSILLGLIGASAKLS-SSALLRVPAQIYTTLIRGIP 74 Query: 70 LLVQLFVIFYGLPH-IGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIP 118 LV + +IFY L + ++ D+ F A I+L + AY +E R +I+S+P Sbjct: 75 DLVLMLLIFYSLQTWLTMLTDAMEWEYIEINPFGAGAITLGFIYGAYFTETFRGAILSVP 134 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+ A GL R Q R+++ PQ + + + + + +LK+T++ S I + ++ + + Sbjct: 135 RGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALVSIIGLADLVKAS 194 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTS 204 Q +TYQ A +YL++TS Sbjct: 195 QDAGKSTYQLFYFLVLAALIYLLITS 220 >gi|319948859|ref|ZP_08022972.1| ABC amino acid transporter, permease component [Dietzia cinnamea P4] gi|319437461|gb|EFV92468.1| ABC amino acid transporter, permease component [Dietzia cinnamea P4] Length = 243 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 10/160 (6%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRGT LLVQLF +F+ LP +G D I++L LN+ AY +E++R S+ ++P QW+A Sbjct: 62 FRGTSLLVQLFWLFFVLPLLGYELDPLFCGILALGLNYGAYAAEVVRGSLAAVPAPQWEA 121 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS-------TITIPEIFQT 177 + A+ T Q + I+ PQ PL++ I +LK +++AS T I E+ + Sbjct: 122 ALALNFTSWQRLYRIVFPQAWVQMIPPLNNLLIQLLKGSALASFILLQDLTFHIGELRRV 181 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 V L++Y +A+V LT F ++++ +S + Sbjct: 182 TGDTVFAFGIGLVLYFLIAYV---LTLFMNMLEVGAKSRL 218 >gi|209547536|ref|YP_002279454.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538780|gb|ACI58714.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 220 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 88/158 (55%), Gaps = 3/158 (1%) Query: 33 VISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 VIS++IG I ++ F + + + YV + R P+LV + F+ LP +G+ D Sbjct: 29 VISILIGAVIGLVVAFALTSKNRLAVVPARVYVTVIRNLPILVLVLFAFFALPQMGLRLD 88 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 + ++ L+L AY++E+ R+ ++SIPKG +A AIGLT Q II P + Sbjct: 89 KIKSFVLVLSLYSGAYLAEVFRAGLLSIPKGLTEAGLAIGLTGMQIRSSIIAPLMLRNVL 148 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 LSS IS+ K TS+A+ I +PE+ A++I +++ Sbjct: 149 PSLSSTIISLFKDTSLAAAIAVPELTFAARKINVESFR 186 >gi|297579919|ref|ZP_06941846.1| amino acid ABC transporter, permease [Vibrio cholerae RC385] gi|297535565|gb|EFH74399.1| amino acid ABC transporter, permease [Vibrio cholerae RC385] Length = 266 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 48/140 (34%), Positives = 88/140 (62%), Gaps = 3/140 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQ++++++ P IG+ D F +++L L AY +E+ R + SI + Sbjct: 104 YIAVVRNTPLLVQIYLLYFVFGPVIGL--DRFATAVLALALFQGAYTAEVFRGGLNSIAQ 161 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ ++GL+R T +ILPQ + + PL++E +S++K++S+ S + I ++ + Sbjct: 162 GQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGR 221 Query: 180 RIVSTTYQPLIIYCELAFVY 199 IVS T P I+ +A +Y Sbjct: 222 NIVSETAMPFEIWFSVAAIY 241 >gi|229528071|ref|ZP_04417462.1| amino acid ABC transporter permease protein [Vibrio cholerae 12129(1)] gi|229334433|gb|EEN99918.1| amino acid ABC transporter permease protein [Vibrio cholerae 12129(1)] Length = 266 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 48/140 (34%), Positives = 88/140 (62%), Gaps = 3/140 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQ++++++ P IG+ D F +++L L AY +E+ R + SI + Sbjct: 104 YIAVVRNTPLLVQIYLLYFVFGPVIGL--DRFATAVLALALFQGAYTAEVFRGGLNSIAQ 161 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ ++GL+R T +ILPQ + + PL++E +S++K++S+ S + I ++ + Sbjct: 162 GQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGR 221 Query: 180 RIVSTTYQPLIIYCELAFVY 199 IVS T P I+ +A +Y Sbjct: 222 NIVSETAMPFEIWFSVAAIY 241 >gi|254224690|ref|ZP_04918306.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51] gi|125622753|gb|EAZ51071.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51] Length = 266 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 48/140 (34%), Positives = 88/140 (62%), Gaps = 3/140 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQ++++++ P IG+ D F +++L L AY +E+ R + SI + Sbjct: 104 YIAVVRNTPLLVQIYLLYFVFGPVIGL--DRFATAVLALALFQGAYTAEVFRGGLNSIAQ 161 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ ++GL+R T +ILPQ + + PL++E +S++K++S+ S + I ++ + Sbjct: 162 GQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGR 221 Query: 180 RIVSTTYQPLIIYCELAFVY 199 IVS T P I+ +A +Y Sbjct: 222 NIVSETAMPFEIWFSVAAIY 241 >gi|170016703|ref|YP_001727622.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum KM20] gi|169803560|gb|ACA82178.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Leuconostoc citreum KM20] Length = 482 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 50/142 (35%), Positives = 83/142 (58%), Gaps = 1/142 (0%) Query: 62 VWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +++FRG PL+V F I+ GLP IG +F A +++L LN AY + +R ++ +G Sbjct: 324 IYLFRGLPLMVLAFFIYIGLPGVIGTKIPAFTAGLLTLILNEGAYTAAFVRGGFEAVDRG 383 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++GL +++R +I+PQ + ++FI LK TS+ S I I E+ QT Sbjct: 384 QMEAARSLGLPYSKSMRRVIMPQGLKIMIPSFINQFIITLKDTSILSAIGILELTQTGSL 443 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 IVS Q ++ +A +YLI+ Sbjct: 444 IVSRNSQGFRVWAIVAVIYLIV 465 >gi|327486002|gb|AEA80408.1| Amino acid ABC transporter, permease protein [Vibrio cholerae LMA3894-4] Length = 265 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 48/140 (34%), Positives = 88/140 (62%), Gaps = 3/140 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQ++++++ P IG+ D F +++L L AY +E+ R + SI + Sbjct: 103 YIAVVRNTPLLVQIYLLYFVFGPVIGL--DRFATAVLALALFQGAYTAEVFRGGLNSIAQ 160 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ ++GL+R T +ILPQ + + PL++E +S++K++S+ S + I ++ + Sbjct: 161 GQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGR 220 Query: 180 RIVSTTYQPLIIYCELAFVY 199 IVS T P I+ +A +Y Sbjct: 221 NIVSETAMPFEIWFSVAAIY 240 >gi|293603169|ref|ZP_06685602.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292818400|gb|EFF77448.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 219 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 115/203 (56%), Gaps = 4/203 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W +I DS LL A +T+ + ++ ++++ G +A++R+ S+ I + I Sbjct: 1 MNLDW-GIIWDSRDVLLQGA-AMTIMLTVVTMLLAVPGGIVLALMRLS-SNRIANGIAVA 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 V FR PL++ ++ FY +P + + F + +++L LN SAY SE R+ I SI K Sbjct: 58 IVEFFRNLPLILVIYWAFYVMPMALDVQFSALTTALVALVLNVSAYNSETFRAGINSIRK 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ A+G++R Q + +++PQ L+S +IS+ K TS+ S I + E+ + Sbjct: 118 GQMEAALAMGMSRHQAMFKVLIPQAARRILPVLASTWISLFKDTSLVSVIAVSELAYASM 177 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 ++ + +++ L + +A +Y ++ Sbjct: 178 QVRAQSFRVLEMLTAMAVIYWLM 200 >gi|292670513|ref|ZP_06603939.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Selenomonas noxia ATCC 43541] gi|292647923|gb|EFF65895.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Selenomonas noxia ATCC 43541] Length = 247 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 66/233 (28%), Positives = 120/233 (51%), Gaps = 16/233 (6%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +I P LL + + VTL + +S + ++G I + + L++ YV++ R Sbjct: 1 MIGQVMPDLL-SYLDVTLLVGFVSIALGSLLGALITWANLGGPAPLRWLVVG-YVYVMRC 58 Query: 68 TPLLVQLFVIFYGLPHI-----GIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPK 119 TP +V LF++FYGLP + G ++ V II+ TL F AYISE+ R++ ++P+ Sbjct: 59 TPSIVLLFIVFYGLPKLLDTMFGYDMNAMHRAVFAIITFTLLFGAYISEVFRAAYSAVPR 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ + GLT Q RH++L QT + + I++LK S+A TI + ++ Sbjct: 119 GQYEAAVSAGLTPFQAFRHVMLGQTAIIALPNFGNAAINLLKEASLAYTIGLIDLIGKGN 178 Query: 180 RIVSTTYQP--LIIYCELAFVY----LILTSFCYIIQIKIESSVTQHTYSVDK 226 I++ + + IY VY L+L + ++ +++ + S +K Sbjct: 179 LIIAQNFGAYGIEIYLACMLVYWVMVLLLEQVFHWLEKRLDKGTSLRAASAEK 231 >gi|153827815|ref|ZP_01980482.1| amino acid ABC transporter, permease protein [Vibrio cholerae 623-39] gi|148876660|gb|EDL74795.1| amino acid ABC transporter, permease protein [Vibrio cholerae 623-39] Length = 266 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 48/140 (34%), Positives = 88/140 (62%), Gaps = 3/140 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQ++++++ P IG+ D F +++L L AY +E+ R + SI + Sbjct: 104 YIAVVRNTPLLVQIYLLYFVFGPVIGL--DRFATAVLALALFQGAYTAEVFRGGLNSIAQ 161 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ ++GL+R T +ILPQ + + PL++E +S++K++S+ S + I ++ + Sbjct: 162 GQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGR 221 Query: 180 RIVSTTYQPLIIYCELAFVY 199 IVS T P I+ +A +Y Sbjct: 222 NIVSETAMPFEIWFSVAAIY 241 >gi|304386275|ref|ZP_07368608.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Pediococcus acidilactici DSM 20284] gi|304327632|gb|EFL94859.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Pediococcus acidilactici DSM 20284] Length = 216 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 1/187 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ + TL + I+ SL+IG A++ + S + I YV + R PLLV Sbjct: 12 LFSGLGQTLLCSLIALFFSLVIGSLFAIMEVLPSR-LARTIGRIYVEVVRNIPLLVVTMF 70 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 + +P + F A I LT+ SA+I+E +R+ I S+ GQ +A+ + G+T Q + Sbjct: 71 FYIVIPRYVPAVNGFTAGTIGLTIYTSAFIAETVRAGIQSVSGGQMEAARSNGMTFSQAM 130 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 R+I+LPQ PL ++FI+++K++SV + + ++ I STT+ + Y + Sbjct: 131 RYIVLPQAFKIVIPPLGNQFINLVKNSSVLAFVAGFDLMYVGNDIASTTFDTINSYLVVG 190 Query: 197 FVYLILT 203 +YLI+T Sbjct: 191 VLYLIIT 197 >gi|153801933|ref|ZP_01956519.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-3] gi|124122508|gb|EAY41251.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-3] Length = 266 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 48/140 (34%), Positives = 88/140 (62%), Gaps = 3/140 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQ++++++ P IG+ D F +++L L AY +E+ R + SI + Sbjct: 104 YIAVVRNTPLLVQIYLLYFVFGPVIGL--DRFATAVLALALFQGAYTAEVFRGGLNSIAQ 161 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ ++GL+R T +ILPQ + + PL++E +S++K++S+ S + I ++ + Sbjct: 162 GQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGR 221 Query: 180 RIVSTTYQPLIIYCELAFVY 199 IVS T P I+ +A +Y Sbjct: 222 NIVSETAMPFEIWFSVAAIY 241 >gi|153216003|ref|ZP_01950225.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587] gi|124114516|gb|EAY33336.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587] Length = 265 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 48/140 (34%), Positives = 88/140 (62%), Gaps = 3/140 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQ++++++ P IG+ D F +++L L AY +E+ R + SI + Sbjct: 103 YIAVVRNTPLLVQIYLLYFVFGPVIGL--DRFATAVLALALFQGAYTAEVFRGGLNSIAQ 160 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ ++GL+R T +ILPQ + + PL++E +S++K++S+ S + I ++ + Sbjct: 161 GQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGR 220 Query: 180 RIVSTTYQPLIIYCELAFVY 199 IVS T P I+ +A +Y Sbjct: 221 NIVSETAMPFEIWFSVAAIY 240 >gi|288961594|ref|YP_003451904.1| polar amino acid transport system permease protein [Azospirillum sp. B510] gi|288913874|dbj|BAI75360.1| polar amino acid transport system permease protein [Azospirillum sp. B510] Length = 284 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 118/218 (54%), Gaps = 10/218 (4%) Query: 6 FNLIIDSFPQLL---------YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 F LI + P LL +TL I +S +S++IG R+ ++ + Sbjct: 59 FALIAEKLPFLLGLRLTPGGFLQGAALTLLICLLSIALSIVIGVLATAGRLS-TNPVAYG 117 Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + FY FRGTPL+VQL +++ GLP +G V + +++L+LN+ AY+SEI R+ + S Sbjct: 118 VATFYGSFFRGTPLMVQLLLLYLGLPQLGPVPAALPCGVLALSLNYGAYLSEIFRAGVQS 177 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + GQ +A+ A+GL+R Q +ILPQ P ++F+++LK +S+ S + EI Sbjct: 178 VAPGQREAAMALGLSRGQIAWTVILPQATRFVIPPTGAQFVAMLKDSSLVSVTGLWEINF 237 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 AQ ++Y+ + + A VY +L+ +Q ++E Sbjct: 238 LAQSYGRSSYRYVEMLLTAAVVYWMLSLIFEHVQSRLE 275 >gi|283786382|ref|YP_003366247.1| histidine ABC transporter permease [Citrobacter rodentium ICC168] gi|282949836|emb|CBG89459.1| histidine ABC transporter, permease protein [Citrobacter rodentium ICC168] Length = 228 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V++++IG A ++ + + LI Y + RG P L Sbjct: 4 GFSGVILQGAIVTLELALSSVVLAVLIGLVGAGAKLS-QNRVTGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL IG I D VA II+L + AY +E R + +++P G Sbjct: 63 VLMLLIFYGLQIALNAVTEAMGIGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPTG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G T QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTSSQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +T++P +YLI T+ Sbjct: 183 AGKSTWEPFYFAVVCGVIYLIFTT 206 >gi|52840737|ref|YP_094536.1| amino acid (glutamine) ABC transporter, permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627848|gb|AAU26589.1| amino acid (glutamine) ABC transporter, permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 221 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 58/197 (29%), Positives = 107/197 (54%), Gaps = 4/197 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 IV+T+ + +I +++G +++ R I +++ ++ I RGTPL++QL I++ Sbjct: 20 GIVLTMQLLTGGMLIGVLLGSLLSICR---HQGIACFVINRFISILRGTPLILQLSFIYF 76 Query: 80 GLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 +P +G+ VA I++ LN SAY +EI+R+ I S+PKGQ++A+ + + + Sbjct: 77 AVPVLLGMRPSILVAGIVAFGLNSSAYFAEILRAGIESLPKGQFEAALTLQIPSFYLWKD 136 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 IILPQ + + +E I++LK T++ STI ++ + AQ + + + + C F Sbjct: 137 IILPQVVRNIFPAMINEMIALLKETALISTIGGMDLMRQAQTLAAQQFTYFMPLCITGFY 196 Query: 199 YLILTSFCYIIQIKIES 215 Y L + KIE Sbjct: 197 YYSLVLLLEALGKKIEK 213 >gi|239907741|ref|YP_002954482.1| amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239797607|dbj|BAH76596.1| amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 230 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 109/204 (53%), Gaps = 10/204 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + II + L+ +I++ +P + + + IG + +R++ ++ + YV +F Sbjct: 9 WERIIPALDAGLWTSILLIVPAS----LFGVAIGVSVGALRVYGPRPVVK-TLDAYVSLF 63 Query: 66 RGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 RGTPL+VQL+ ++ LP++ +V A I+ L AY SE IR ++SI +G Sbjct: 64 RGTPLVVQLYFWYFALPYVRIGDFALVLSPMWAAIVGFALCSGAYQSEYIRGGLLSIKRG 123 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q A+ A+G+T Q++ ++LPQ + +E I ++K +S+AS IT+ ++ + Sbjct: 124 QLRAAQALGMTPFQSVTSVVLPQAFRRALPGCGNEIIYLIKYSSLASIITVSDLTGMGRS 183 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 + ++++ ++ + YL L + Sbjct: 184 LAKSSFRNTEVFIVVGLYYLALVT 207 >gi|197295286|ref|YP_002153827.1| putative binding-protein-dependent transport system protein [Burkholderia cenocepacia J2315] gi|195944765|emb|CAR57370.1| putative binding-protein-dependent transport system component [Burkholderia cenocepacia J2315] Length = 255 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 126/228 (55%), Gaps = 21/228 (9%) Query: 9 IIDS-FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 ++D+ P+LL AA+ TL + +S S+++G +A+ + ++ + RG Sbjct: 8 LLDTVMPKLL-AAVPTTLALTLVSGAASVLLGVPLALA-AGARHAPLRWSARGWLMLIRG 65 Query: 68 TPLLVQLFVIFYGLPHI------------GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 TPLLVQL++++YG I ++ D+F I++L++N SAY++ I+R +I Sbjct: 66 TPLLVQLYLLYYGFGQIVPREWMRDSWASPLLRDAFWYAIVALSVNESAYVATILRGAIA 125 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +P G+ +A +A G+TR Q +R I+ P+ + L+ E I +LKST +AST+T+ ++ Sbjct: 126 GVPAGEIEAGHAYGMTRMQVLRRIVGPRAWRLALPALTGEAILLLKSTVLASTVTVFDVM 185 Query: 176 QTAQRIVSTT---YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TA + T Y+PL A VY++L + I ++E + ++ Sbjct: 186 GTANTLRFETLRVYEPL---AGAAIVYVVLVALLTIPAARVEQRINRY 230 >gi|323525227|ref|YP_004227380.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323382229|gb|ADX54320.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 237 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 15/210 (7%) Query: 5 WFN-LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W N L D + + + +TL + +S + + +AV R+ + L+ Y + Sbjct: 9 WRNYLYTDGYR---FTGLAITLWLLVVSIGLGFCLSIPLAVARVSKKKWLAGLVW-LYTY 64 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVF----------DSFVAIIISLTLNFSAYISEIIRSS 113 IFRGTPL VQL + + GL + IV D +++ TLN AY +EI + Sbjct: 65 IFRGTPLYVQLLLCYTGLYSLEIVRNHELTNAFFRDGMHCTLLAFTLNTCAYTTEIFAGA 124 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I + P G+ +A+ A G++ R +ILP + + S+E I +L +T+VA T T+P+ Sbjct: 125 IKATPYGEIEAARAYGMSSFTLYRRVILPSALRRALPYYSNEVILMLHATTVAFTATVPD 184 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I + A+ + S TYQ + A +YL ++ Sbjct: 185 ILKIARDVNSATYQSFNAFGIAALLYLCIS 214 >gi|262191874|ref|ZP_06050043.1| amino acid ABC transporter permease protein [Vibrio cholerae CT 5369-93] gi|262032239|gb|EEY50808.1| amino acid ABC transporter permease protein [Vibrio cholerae CT 5369-93] Length = 265 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 48/140 (34%), Positives = 88/140 (62%), Gaps = 3/140 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQ++++++ P IG+ D F +++L L AY +E+ R + SI + Sbjct: 103 YIAVVRNTPLLVQIYLLYFVFGPVIGL--DRFATAVLALALFQGAYTAEVFRGGLNSIAQ 160 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ ++GL+R T +ILPQ + + PL++E +S++K++S+ S + I ++ + Sbjct: 161 GQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGR 220 Query: 180 RIVSTTYQPLIIYCELAFVY 199 IVS T P I+ +A +Y Sbjct: 221 NIVSETAMPFEIWFSVAAIY 240 >gi|116248755|ref|YP_764596.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115253405|emb|CAK11793.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 223 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 109/198 (55%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F +++ +P+++ I++TL + I V+ + +G F A +R + ++ YV + Sbjct: 7 FGWLLEYYPEII-KGILITLELIAIGGVLGISLGIFCAWVRAL-GPAWLKPVVATYVELI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP L+QLF IF+GLP +G A +++ +N AY EIIR+ I + PKGQ++A Sbjct: 65 RNTPFLIQLFFIFFGLPSLGFKLSELTAANLAMVVNLGAYSCEIIRAGIQATPKGQFEAG 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++ +TR +T RH++L ++ LSS+ + ++ +SV S I ++ A I S T Sbjct: 125 ESLAMTRFETFRHVVLVPSLQRIWPALSSQVVIVMLGSSVVSQIAAEDLTFAANFIQSRT 184 Query: 186 YQPLIIYCELAFVYLILT 203 ++ Y +YL+L Sbjct: 185 FRAFEAYIVSTAIYLVLA 202 >gi|295103474|emb|CBL01018.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Faecalibacterium prausnitzii SL3/3] Length = 254 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 62/187 (33%), Positives = 95/187 (50%), Gaps = 23/187 (12%) Query: 37 IIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF----VIFYGLPHIGIVFDSFV 92 ++GFF AV ++ Y I RGTP++VQL VIF + +V Sbjct: 84 VLGFFNAVCQV-------------YTTIIRGTPMMVQLLIMSMVIFANSRNFTMVG---- 126 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 ++L +N AY+SEIIR ++++ GQ +A ++GL T+ II+PQ I L Sbjct: 127 --ALTLGINSGAYVSEIIRGGLMAVDPGQMEAGRSLGLNYMTTMVVIIIPQAIRAVLPAL 184 Query: 153 SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIK 212 +EFI +LK TS+ +TI E+ AQ I++ TY + +A +YLIL + K Sbjct: 185 GNEFIILLKDTSLITTIGGKELLYAAQGIMNRTYDAMFPLLGVALIYLILVMLFTWLLSK 244 Query: 213 IESSVTQ 219 E + Q Sbjct: 245 FERRLAQ 251 >gi|295098054|emb|CBK87144.1| L-histidine ABC transporter membrane protein/L-arginine ABC transporter membrane protein/L-lysine ABC transporter membrane protein/L-ornithine ABC transporter membrane protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 228 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 111/225 (49%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V++++IG A ++ ++ ++LI Y + RG P L Sbjct: 4 GFSGVILQGALVTLELAISSVVLAVLIGLAGAGAKLS-ANRPLALIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL IG I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNGVTDAIGMEQIDIDPMVAGIITLGFIYGAYFTETFRGAYMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G T QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 HIEAATAYGFTSSQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T++P +YL+ T+ + + +E + D Sbjct: 183 AGKSTWEPFYFAVVCGVIYLVFTTVSNGVLLLLERRYSVGVKRAD 227 >gi|251790177|ref|YP_003004898.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247538798|gb|ACT07419.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 256 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 58/217 (26%), Positives = 115/217 (52%), Gaps = 7/217 (3%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF-- 65 L++ +P ++ TL I+ ++ V S +G I + R+ L W++ Sbjct: 15 LLMGQYPNGPLGGVLCTLLISLLAVVFSFPLGVLIGLARL---SPWRGLRWAATAWVYTL 71 Query: 66 RGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RG PL++ +F ++ +P IG F ++ +L + SAYI+EI+R I ++P GQ++A Sbjct: 72 RGIPLMMVVFWTYFCVPLLIGQNTSGFSTMLCTLVIYESAYIAEIVRGGIQALPHGQYEA 131 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 S A+G++ +T+R ++LPQ + S L S+ +SI+K +++ I +PE+ A ++ + Sbjct: 132 SRALGMSYLKTLRLVVLPQALFNSLPSLVSQLVSIIKDSTLGYVINVPELTYAANQVSNQ 191 Query: 185 TY-QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +P ++ +A Y I+ + ++ES + Sbjct: 192 LLTKPFQVFAIVALSYYIICFSLTWLANRLESYIANK 228 >gi|210615936|ref|ZP_03290859.1| hypothetical protein CLONEX_03078 [Clostridium nexile DSM 1787] gi|210150029|gb|EEA81038.1| hypothetical protein CLONEX_03078 [Clostridium nexile DSM 1787] Length = 216 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 106/184 (57%), Gaps = 7/184 (3%) Query: 29 CISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF 88 + ++SL +G ++ R+ + +I I+ Y+ I RGTPL++QL I++G ++ + Sbjct: 22 AFTLILSLPLGIVVSFGRMS-KNVVIRTIVKVYISIMRGTPLILQLMFIYFGRYYVLKMQ 80 Query: 89 DS----FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQT 144 + A+I+ LN++AY +EI R I S+P GQ++A+ +G T+ QT II PQ Sbjct: 81 MTPEWMNTAVILGFVLNYAAYFAEIYRGGIESMPIGQYEAAEILGYTKVQTFVKIIFPQV 140 Query: 145 ITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST--TYQPLIIYCELAFVYLIL 202 + +++E I+++K TS+A +++ E+F A+ I ++ + PLII +V+ + Sbjct: 141 MKRILPSITNEVITLVKDTSIAYVLSVQEMFTVAKAISASQASVSPLIIAAVFYYVFNFI 200 Query: 203 TSFC 206 +F Sbjct: 201 VAFV 204 >gi|190894702|ref|YP_001984995.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700363|gb|ACE94445.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 220 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 54/158 (34%), Positives = 90/158 (56%), Gaps = 3/158 (1%) Query: 33 VISLIIGFFIAVIRIF--FSDTIISLI-MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 VIS++IG I ++ F S + +L+ YV + R P+LV + F+ LP +G+ D Sbjct: 29 VISILIGAAIGLVVAFALISRSRFALVPARVYVTVIRNLPILVLVLFAFFALPQMGLRLD 88 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 + ++ L+L AY++E+ R+ ++SIP+G +A AIGLT Q II P + Sbjct: 89 KMKSFVLVLSLYSGAYLAEVFRAGLLSIPRGLTEAGLAIGLTGMQIRSSIIAPLMLRNVL 148 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 LSS IS+ K TS+A+ I +PE+ A++I +++ Sbjct: 149 PSLSSTIISLFKDTSLAAAIAVPELTFAARKINVESFR 186 >gi|238791255|ref|ZP_04634894.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia intermedia ATCC 29909] gi|238729388|gb|EEQ20903.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia intermedia ATCC 29909] Length = 255 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 93/170 (54%), Gaps = 31/170 (18%) Query: 61 YVWIFRGTPLLVQLFVIFYGL------PHIGIV-----------------FDSFVAIIIS 97 Y+ RGTPL VQ+ V+ + L P GI+ + +F++ +++ Sbjct: 69 YISAIRGTPLFVQIMVVHFALVPLFINPRDGILVTNGIMSSDFARMLRSDYGAFLSCVVA 128 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 +TLN AY+SEI R+ I SI +GQ +AS ++G++ +T+R +ILPQ PL + I Sbjct: 129 ITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLPPLGNNAI 188 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTY----QPLIIYCELAFVYLILT 203 +I+K +S+AS I + ++ A R VS Y +P Y ++ VY ++T Sbjct: 189 AIVKDSSLASAIGLADL-AYAARTVSGAYATYWEP---YLTISLVYWVIT 234 >gi|329927203|ref|ZP_08281501.1| putative arginine ABC transporter, permease protein ArtQ [Paenibacillus sp. HGF5] gi|328938603|gb|EGG34986.1| putative arginine ABC transporter, permease protein ArtQ [Paenibacillus sp. HGF5] Length = 219 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 51/138 (36%), Positives = 86/138 (62%), Gaps = 5/138 (3%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYG---LPHIG--IVFDSFVAIIISLTLNFSAYISE 108 ++ + + Y+++FRGTPLL+QL +G LP IG +V D FVA ++ LN++AY +E Sbjct: 49 LAWLANAYIYVFRGTPLLLQLLFFCFGLPVLPVIGEYLVLDRFVAACLAFVLNYAAYFAE 108 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I R +++I KGQ++AS +GL R QT +ILPQ + +S+E I+++K T++ Sbjct: 109 IFRGGLLAIDKGQYEASKVLGLNRWQTTTKVILPQMFRVALPAVSNESITLVKDTALLYA 168 Query: 169 ITIPEIFQTAQRIVSTTY 186 + +PE+ A V+ + Sbjct: 169 VAVPELLHFAYTAVNRDF 186 >gi|302526371|ref|ZP_07278713.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. AA4] gi|302435266|gb|EFL07082.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. AA4] Length = 324 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 107/202 (52%), Gaps = 22/202 (10%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI-----FYGLPHIGIV 87 V L+ G +A++R+ + ++ + YVWIFR PL+V L + Y +GI Sbjct: 95 VFGLVGGIVLALLRLS-KNPLLQAVSWAYVWIFRSIPLIVLLLFLANVTALYSTLSLGIP 153 Query: 88 FDS-------------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F FV ++ L+LN +AY +EI+R+ ++S+ +GQ +A+ A+GL R + Sbjct: 154 FGPSFFSFSATDVLSFFVVAVLGLSLNEAAYAAEIVRAGVLSVDQGQLEAAAALGLPRSR 213 Query: 135 TIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 R IILPQ T + VP +++ I +LK TSV ++ E+F + ST +I Sbjct: 214 QYRRIILPQA-TRAIVPAYANQLIGLLKGTSVVYITSLLELFGVVETQASTNSGQIIPLL 272 Query: 194 ELAFV-YLILTSFCYIIQIKIE 214 + V Y+ILTS +IQ +E Sbjct: 273 LVGTVWYIILTSVLSVIQYYVE 294 >gi|183603450|ref|ZP_02717005.2| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC3059-06] gi|183576997|gb|EDT97525.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC3059-06] Length = 418 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 95/176 (53%), Gaps = 1/176 (0%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 IA + S ++G +++IR + +++ + Y+ + R TPLL+QLF +++GLP IGI Sbjct: 3 IAVWGILGSFLLGLIVSIIR-HYRILVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGI 61 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 V S V + L +Y++E RS + +I + Q + AIGLT Q +++LPQ Sbjct: 62 VLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAIGLTPLQVFYYVVLPQATA 121 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + S+ I ++K TSV S + + ++ A+ ++ Y+ I L YLI+ Sbjct: 122 VALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYETDIALAMLVVAYLIM 177 Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 94/168 (55%), Gaps = 4/168 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ I+ +S ++S++ G + +I S II + Y+ R P LV LF++++ Sbjct: 214 GLGVTIGISILSVLLSMMFGTVMGIIMTSHSR-IIRFLTRLYLEFIRIMPQLVLLFIVYF 272 Query: 80 GLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 GL + I + II TL +A + +++R +I S+PK Q+++ ++GLT Q H Sbjct: 273 GLARNFNINISGETSAIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQSLGLTNVQLYYH 332 Query: 139 IILPQTITTSAVPLSSEFIS-ILKSTSVASTITIPEIFQTAQRIVSTT 185 II+PQ + +P + ++ ++K+TS+ I + E+ + Q+I+ + Sbjct: 333 IIIPQVL-RRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSN 379 >gi|293605797|ref|ZP_06688170.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292815792|gb|EFF74900.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 229 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 113/203 (55%), Gaps = 17/203 (8%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS---LIMHFYVWIFRGTPLL 71 QLL++ +VVT+ + F+++ ++ F IAV + T ++ ++ YV R PLL Sbjct: 10 QLLFSGMVVTVQL----FLVAWVMAFAIAVTLVVVRATNLAPCRWVVDAYVEYHRNVPLL 65 Query: 72 VQLFVIFYGLPHI---GI---VFDSFVAI---IISLTLNFSAYISEIIRSSIISIPKGQW 122 VQ+ ++G+P + G+ ++D + I+L L +AYI+E IRS + +IP Q+ Sbjct: 66 VQVLFWYFGMPELLPEGLRLWLYDHNAEMSLAAIALALGSAAYIAEDIRSGLRAIPWTQF 125 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A+G + Q +R++I+PQ + S PL + + K+TSVA I + E+ A+ I Sbjct: 126 EAARALGASYLQCMRYVIVPQALRISIPPLVGRALLLFKNTSVAMAIGVMELTYQAREIE 185 Query: 183 STTYQPLIIYCELAFVYLILTSF 205 + TY+ + +YL L SF Sbjct: 186 NETYRTFATFGAATIMYL-LGSF 207 >gi|295675884|ref|YP_003604408.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] gi|295435727|gb|ADG14897.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 237 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 15/210 (7%) Query: 5 WFN-LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W N L D + + + +TL + +S + + +AV R+ + L+ Y + Sbjct: 9 WRNYLFTDGYR---FTGVAITLWLLVVSIGLGFCLSVPLAVARVSKKKWLAGLVW-LYTY 64 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVF----------DSFVAIIISLTLNFSAYISEIIRSS 113 IFRGTPL VQL + + GL + I+ D +++ TLN AY +EI + Sbjct: 65 IFRGTPLYVQLLLCYTGLYSLEIIRNNELTNAFFRDGMNCTLLAFTLNTCAYTTEIFAGA 124 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I + P G+ +A+ A G++ R +ILP + + S+E I +L +T+VA T T+P+ Sbjct: 125 IKATPYGEIEAARAYGMSSFTLYRRVILPSALRRALPYYSNEVILMLHATTVAFTATVPD 184 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I + A+ + S TYQ + A +YL ++ Sbjct: 185 ILKIARDVNSATYQSFNAFGIAALLYLCIS 214 >gi|238758198|ref|ZP_04619377.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia aldovae ATCC 35236] gi|238703528|gb|EEP96066.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia aldovae ATCC 35236] Length = 255 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 93/170 (54%), Gaps = 31/170 (18%) Query: 61 YVWIFRGTPLLVQLFVIFYGL------PHIGIV-----------------FDSFVAIIIS 97 Y+ RGTPL VQ+ V+ + L P GI+ + +F++ +++ Sbjct: 69 YISAIRGTPLFVQIMVVHFALVPLFINPRDGILVTNGIMSSDFARMLRSDYGAFLSCVVA 128 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 +TLN AY+SEI R+ I SI +GQ +AS ++G++ +T+R +ILPQ PL + I Sbjct: 129 ITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLPPLGNNAI 188 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTY----QPLIIYCELAFVYLILT 203 +I+K +S+AS I + ++ A R VS Y +P Y ++ VY ++T Sbjct: 189 AIVKDSSLASAIGLADL-AYAARTVSGAYATYWEP---YLAISVVYWVIT 234 >gi|237653224|ref|YP_002889538.1| polar amino acid ABC transporter inner membrane subunit [Thauera sp. MZ1T] gi|237624471|gb|ACR01161.1| polar amino acid ABC transporter, inner membrane subunit [Thauera sp. MZ1T] Length = 244 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 52/212 (24%), Positives = 110/212 (51%), Gaps = 16/212 (7%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F +I S P+ + + +T+ + ++ + + +AV+R+ + ++S + Y + F Sbjct: 6 FKVITGSLPEF-WRGLWMTVQLTGLALLFGFFVAIPLAVMRLS-PNRLVSAPVAAYTYFF 63 Query: 66 RGTPLLVQLFVIFYGL--------------PHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 RGTP+LVQL +++YG P + + + + + LN AY EI+ Sbjct: 64 RGTPMLVQLLLVYYGASQWEWMRAAWEAGHPLWSLFREPYFCALFAFGLNTCAYTVEILA 123 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S+ + P G+ +A+ A+G+TR + ++ I++P + S+E I +L+ +++AS +T+ Sbjct: 124 GSMRNTPHGELEAAKAMGMTRLKALQRIVIPSALRRMIPSYSNEVILMLQGSAIASAVTL 183 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ A+ + S + P + + +YL LT Sbjct: 184 VDLTGAARNVYSRHFAPFESFVFVGLIYLALT 215 >gi|297519677|ref|ZP_06938063.1| arginine transporter permease subunit ArtM [Escherichia coli OP50] Length = 181 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 53/173 (30%), Positives = 99/173 (57%), Gaps = 16/173 (9%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYG------------LPHIGIVFDSFVAIIISLTLNFSA 104 ++ Y+ +F GTPLLVQ+F+I+YG L H+ + + ++ +I+L+LN +A Sbjct: 6 LVRGYITLFTGTPLLVQIFLIYYGPGQFPTLQEYPALWHL--LSEPWLCALIALSLNSAA 63 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 Y +++ +I +IP+GQW + A+G+++K T+ I+LP S S+E + + KSTS Sbjct: 64 YTTQLFYGAIRAIPEGQWQSCSALGMSKKDTL-AILLPYAFKRSLSSYSNEVVLVFKSTS 122 Query: 165 VASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +A TIT+ E+ +Q + TY ++++ +YL++ ++ IE Sbjct: 123 LAYTITLMEVMGYSQLLYGRTYD-VMVFGAAGIIYLVVNGLLTLMMRLIERKA 174 >gi|229514446|ref|ZP_04403907.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA 21] gi|229526418|ref|ZP_04415822.1| amino acid ABC transporter permease protein [Vibrio cholerae bv. albensis VL426] gi|229336576|gb|EEO01594.1| amino acid ABC transporter permease protein [Vibrio cholerae bv. albensis VL426] gi|229348426|gb|EEO13384.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA 21] Length = 266 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 48/140 (34%), Positives = 88/140 (62%), Gaps = 3/140 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQ++++++ P IG+ D F +++L L AY +E+ R + SI + Sbjct: 104 YIAVVRNTPLLVQIYLLYFVFGPVIGL--DRFATAVLALALFQGAYTAEVFRGGLNSIAQ 161 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ ++GL+R T +ILPQ + + PL++E +S++K++S+ S + I ++ + Sbjct: 162 GQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGR 221 Query: 180 RIVSTTYQPLIIYCELAFVY 199 IVS T P I+ +A +Y Sbjct: 222 NIVSETAMPFEIWFSVAAIY 241 >gi|227819411|ref|YP_002823382.1| ABC transporter permease [Sinorhizobium fredii NGR234] gi|227338410|gb|ACP22629.1| putative permease component of ABC transporter [Sinorhizobium fredii NGR234] Length = 219 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 103/187 (55%), Gaps = 1/187 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + V++ I+ +S V+ ++G F+ + + + + ++ Y RGTP+LV + Sbjct: 16 LLKGLGVSISISLLSIVVGTVLGVFVG-LALTYGYRPVKWLVRGYTDFIRGTPVLVLVLA 74 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +Y L +GI F A I++L + S+++ E++R ++ SIPKGQ +A+ AIGLT QT Sbjct: 75 SYYVLSTVGIDLGPFQAGILALAVFCSSHVGELVRGALQSIPKGQTEAAKAIGLTFPQTF 134 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +++ PQ + + + ++K++++ S I + E+ Q ++S T+ L Y Sbjct: 135 AYVLGPQALRQALPAWVNTAAEMVKASTLLSIIGVGELLLRTQEVISRTFMSLEFYFFAG 194 Query: 197 FVYLILT 203 F+Y ++ Sbjct: 195 FLYFVIN 201 >gi|170767831|ref|ZP_02902284.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia albertii TW07627] gi|170123319|gb|EDS92250.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia albertii TW07627] Length = 246 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 52/214 (24%), Positives = 117/214 (54%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ ++G F ++R + +S + YV +FR PL+VQ F Sbjct: 25 IWSGFQVTIALSICAWIIAFLVGSFFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F + F++ ++ L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + + +E V Sbjct: 204 YSAHAWESFTAITLAYVLINAVIMLAMTLVERKV 237 >gi|254284659|ref|ZP_04959626.1| amino acid ABC transporter, permease protein [Vibrio cholerae AM-19226] gi|150425444|gb|EDN17220.1| amino acid ABC transporter, permease protein [Vibrio cholerae AM-19226] Length = 266 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 48/140 (34%), Positives = 88/140 (62%), Gaps = 3/140 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TPLLVQ++++++ P IG+ D F +++L L AY +E+ R + SI + Sbjct: 104 YIAVVRNTPLLVQIYLLYFVFGPVIGL--DRFATAVLALALFQGAYTAEVFRGGLNSIAQ 161 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ ++GL+R T +ILPQ + + PL++E +S++K++S+ S + I ++ + Sbjct: 162 GQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGR 221 Query: 180 RIVSTTYQPLIIYCELAFVY 199 IVS T P I+ +A +Y Sbjct: 222 NIVSETAMPFEIWFSVAAIY 241 >gi|295394799|ref|ZP_06805014.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Brevibacterium mcbrellneri ATCC 49030] gi|294972395|gb|EFG48255.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Brevibacterium mcbrellneri ATCC 49030] Length = 220 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 60/182 (32%), Positives = 97/182 (53%), Gaps = 10/182 (5%) Query: 30 ISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI-- 86 ++ V L++G +A +R+ S T ++ Y+ R TPL + +F +GLP + I Sbjct: 23 VTLVGCLVLGSILAAMRV--SPTPVLRAAASVYITTVRNTPLTLVMFFCVFGLPFLDIRA 80 Query: 87 ----VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 +SFV ++L S +++E++RS I +IP GQ +A+ AIGL QT+R++I+P Sbjct: 81 SHDSAINSFVLACVALIAYTSCFVAEVLRSGISTIPVGQAEAARAIGLNFGQTLRYVIMP 140 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ-PLIIYCELAFVYLI 201 Q T PL S I++LK+TS+AS EI + + L++ A YLI Sbjct: 141 QAFRTVIPPLGSVIIAMLKNTSIASAFNNREIISAMRNAIEMRGDITLLVIAGAAVSYLI 200 Query: 202 LT 203 L Sbjct: 201 LA 202 >gi|218462542|ref|ZP_03502633.1| ABC transporter, membrane spanning protein [Rhizobium etli Kim 5] Length = 174 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 50/141 (35%), Positives = 86/141 (60%), Gaps = 16/141 (11%) Query: 67 GTPLLVQLFVIFYG----LPHIGIVFDSFVAIII---------SLTLNFSAYISEIIRSS 113 GTPLL+QL++++YG LP I + SFV I+ S TLN++AY +E++R + Sbjct: 7 GTPLLIQLWLLYYGVGSLLPMIPGLRSSFVWPIVREGFFFAAVSFTLNYAAYEAEVLRGA 66 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 ++++PKG+ +A A G+T +R I LP+ I + ++ E + LK+T +A T+T+ + Sbjct: 67 LLAVPKGELEAGRAFGMTHWTLLRRIWLPRAIRIALPTIAGEVVLQLKATPLAFTVTVMD 126 Query: 174 IFQTAQRIVSTT---YQPLII 191 ++ A +I T Y+PLI+ Sbjct: 127 LYAVAYKIRQDTLLVYEPLIV 147 >gi|139439311|ref|ZP_01772753.1| Hypothetical protein COLAER_01769 [Collinsella aerofaciens ATCC 25986] gi|133775335|gb|EBA39155.1| Hypothetical protein COLAER_01769 [Collinsella aerofaciens ATCC 25986] Length = 382 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 88/154 (57%), Gaps = 11/154 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIGI-------VFDSFVAIIISLTLNFSAYISEI 109 Y I RGTP++VQ +I+Y L +G ++ +F A +++++LN +AY+ E+ Sbjct: 203 YSTIVRGTPMMVQGLLIYYAGFTVLRGMGFETAQANQIWSTFTAGLVTISLNSTAYMMEV 262 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 +R I SI GQ +A+ ++GL++ Q +R ++ PQ I + L++E I +K +SV S I Sbjct: 263 LRGGIESIDAGQAEAARSLGLSQWQAMRKVVFPQGIKNAIPALTNELIINIKDSSVLSVI 322 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + ++ + Y+ + +YC VYLILT Sbjct: 323 GVFDLMYATTTVAGVYYRQMEVYCVALVVYLILT 356 >gi|187923119|ref|YP_001894761.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187714313|gb|ACD15537.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 237 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 11/194 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +V+TL + +S + + +AV R+ +S ++ Y ++FRGTPL VQL + + Sbjct: 22 GVVITLWLLVVSIGLGFCLSIPLAVARVS-KKKWLSRLVWLYTYVFRGTPLYVQLLLCYT 80 Query: 80 GLPHIGIVF----------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 GL + I+ D +++ TLN AY +EI +I + P G+ +A+ A G Sbjct: 81 GLYSLEIIRNHELTNAFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATPYGEIEAARAYG 140 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 ++ R +ILP + + S+E I +L +T+VA T T+P+I + A+ + S TYQ Sbjct: 141 MSSFTLYRRVILPSALRRALPYYSNEVILMLHATTVAFTATVPDILKIARDVNSATYQSF 200 Query: 190 IIYCELAFVYLILT 203 + A +YL ++ Sbjct: 201 NAFGIAALLYLCIS 214 >gi|119946082|ref|YP_943762.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] gi|119864686|gb|ABM04163.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] Length = 222 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 65/198 (32%), Positives = 107/198 (54%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++ PQ + A + T+ + IS V+ LI+G + A RI ++ I Y+ + Sbjct: 7 FYGLVPYLPQFV-AGVGTTIQLTVISTVLGLILGTYCAAGRIS-KARWLNWICAVYIEVT 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP ++QLF IF+GLP +GI ++ A +I++ N AY +EIIR+ I + GQW+A+ Sbjct: 65 RNTPFIIQLFFIFFGLPALGIKLSAWQAGMIAMVFNLGAYSAEIIRAGIEATAIGQWEAA 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GLT +Q H+ILP L S+ I ++ ++V S I++ E+ A + S + Sbjct: 125 KTLGLTHRQIFMHVILPPAYQRVYPALVSQCIIVMLGSAVVSQISVEELTFAANFVQSRS 184 Query: 186 YQPLIIYCELAFVYLILT 203 + Y A +YL L Sbjct: 185 FLSFESYMLTALIYLFLA 202 >gi|330970980|gb|EGH71046.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 242 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 108/206 (52%), Gaps = 12/206 (5%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + F LL +T+ + +S +S+++G A ++ S ++ + Y + RG P Sbjct: 16 LKGFGPLLLEGTWMTVKLTVLSLALSILLGLIGASAKLS-SSALLRVPAQIYTTLIRGVP 74 Query: 70 LLVQLFVIFYGLPH-IGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIP 118 LV + +IFY L + ++ D+ F A +I+L + AY +E R +I+S+P Sbjct: 75 DLVLMLLIFYSLQTWLTMLTDAMEWEYIEINPFGAGVITLGFIYGAYFTETFRGAILSVP 134 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A+ A GL R Q R+++ PQ + + + + + +LK+T++ S I + ++ + + Sbjct: 135 RGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALVSIIGLADLVKAS 194 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTS 204 Q +TYQ A +YL++TS Sbjct: 195 QDAGKSTYQLFYFLVLAALIYLLITS 220 >gi|170703223|ref|ZP_02894027.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170131873|gb|EDT00397.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 237 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 105/196 (53%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S + + +AV R+ +S+ + FY ++FRGTPL VQL +++ Sbjct: 21 SGLAVTLWLLVASISLGFVCAVPLAVARVS-KKKWLSMPVRFYTYVFRGTPLYVQLLLMY 79 Query: 79 YGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D+F I++ LN AY +EI +I +IP G+ +A+ A Sbjct: 80 TGMYSLEFVRSHSLLDAFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G+T R +ILP + A+PL S+E I +L +T+VA T T+P+I + A+ S TY Sbjct: 140 GMTPFTMYRRVILPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYM 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL ++ Sbjct: 199 AFQSFGIAALIYLAVS 214 >gi|309804119|ref|ZP_07698200.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Lactobacillus iners LactinV 11V1-d] gi|308163887|gb|EFO66153.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Lactobacillus iners LactinV 11V1-d] Length = 437 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 85/143 (59%), Gaps = 10/143 (6%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI---------FFSDT 52 K WF I+ + +++ +++T+ ++ I +I IG + +IR ++ Sbjct: 284 KTNWFVSIMHRYGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPLSKVKYWLLK 343 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 +I+ ++ YV IFRGTP++VQ VI+YG+ + I D +A + +++N AY++E+IR Sbjct: 344 LINWLLAVYVEIFRGTPMMVQAAVIYYGIAQLWHINLDRTLAALFIISINTGAYLAEVIR 403 Query: 112 SSIISIPKGQWDASYAIGLTRKQ 134 IIS PKGQ++A+ A+G++ Q Sbjct: 404 GGIISTPKGQFEAASALGMSHSQ 426 >gi|296274365|ref|YP_003656996.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter nitrofigilis DSM 7299] gi|296098539|gb|ADG94489.1| polar amino acid ABC transporter, inner membrane subunit [Arcobacter nitrofigilis DSM 7299] Length = 265 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 76/225 (33%), Positives = 113/225 (50%), Gaps = 25/225 (11%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFF--------IAVIRIFFSDTII 54 YE+ ID F ++T+ I+ + ++S IIG F + V+R FFS Sbjct: 58 YEYRQKFIDGF--------IMTIIISFFALILSFIIGLFFTYAQNSKLLVLR-FFS---- 104 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 FY+ I RGTPLLVQ+ + FY + + ++ I L L AY+ EIIR +I Sbjct: 105 ----RFYIEIIRGTPLLVQILIFFYVFANNLGFENRYIVGTIILALFAGAYVCEIIRGAI 160 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 SI Q++ ++G+T Q R+II PQ L+ +F SI+K +S+ S I+I E Sbjct: 161 ESIEIEQFETGLSLGMTNYQIYRYIIFPQAFNRMLPALTGQFASIIKDSSLLSIISISEF 220 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 AQ + + TY Y LA YLILT K+E++V + Sbjct: 221 TMNAQEVNAYTYSTFESYIPLAIGYLILTYPISYYTKKLENNVQK 265 >gi|148360894|ref|YP_001252101.1| amino acid (glutamine) ABC transporter permease [Legionella pneumophila str. Corby] gi|148282667|gb|ABQ56755.1| amino acid (glutamine) ABC transporter, permease [Legionella pneumophila str. Corby] Length = 215 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 58/197 (29%), Positives = 107/197 (54%), Gaps = 4/197 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 IV+T+ + +I +++G +++ R + +++ ++ I RGTPL++QL I++ Sbjct: 14 GIVLTMQLLTGGMLIGVLLGTLLSICR---HQGVACFVINRFISILRGTPLILQLSFIYF 70 Query: 80 GLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 +P +G+ VA I++ LN SAY +EI+R+ I S+PKGQ++A+ + + + Sbjct: 71 AVPVLLGMRPSILVAGIVAFGLNSSAYFAEILRAGIESLPKGQFEAALTLQIPTFYLWKD 130 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 IILPQ I + +E I++LK T++ STI ++ + AQ + + + + C F Sbjct: 131 IILPQVIKNIFPAMINEMIALLKETALISTIGGMDLMRQAQTLAAQQFTYFMPLCITGFY 190 Query: 199 YLILTSFCYIIQIKIES 215 Y L + KIE Sbjct: 191 YYSLVLLLEALGKKIEK 207 >gi|309804833|ref|ZP_07698895.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Lactobacillus iners LactinV 09V1-c] gi|308165772|gb|EFO67993.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Lactobacillus iners LactinV 09V1-c] Length = 437 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 85/143 (59%), Gaps = 10/143 (6%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI---------FFSDT 52 K WF I+ + +++ +++T+ ++ I +I IG + +IR ++ Sbjct: 284 KTNWFVSIMHRYGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPISKVKYWLLK 343 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 +I+ ++ YV IFRGTP++VQ VI+YG+ + I D +A + +++N AY++E+IR Sbjct: 344 LINWLLAVYVEIFRGTPMMVQAAVIYYGIAQLWHINLDRTLAALFIISINTGAYLAEVIR 403 Query: 112 SSIISIPKGQWDASYAIGLTRKQ 134 IIS PKGQ++A+ A+G++ Q Sbjct: 404 GGIISTPKGQFEAASALGMSHSQ 426 >gi|116492194|ref|YP_803929.1| ABC-type amino acid transport system, permease component [Pediococcus pentosaceus ATCC 25745] gi|116102344|gb|ABJ67487.1| amino acid ABC transporter membrane protein 1, PAAT family [Pediococcus pentosaceus ATCC 25745] Length = 216 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 1/195 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 II S L + + T+ + I+ SLIIG A+ + S ++ I YV + R Sbjct: 4 IIASHGSELLSGLGQTVLCSVIALFFSLIIGSMFAIFEVLPSK-VLHTIGRIYVEVVRNI 62 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLLV + +P + FVA I LT+ SA+I+E +R+ I S+ GQ +A+ + Sbjct: 63 PLLVVTMFFYIVIPQYVASINGFVAGTIGLTIYTSAFIAETVRAGIQSVSGGQMEAARSN 122 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+T Q +R+I+LPQ PL ++FI+++K++SV + + ++ I ST++ Sbjct: 123 GMTYWQAMRYIVLPQAFKIVIPPLGNQFINLVKNSSVLAFVAGFDLMYVGNDIASTSFDT 182 Query: 189 LIIYCELAFVYLILT 203 + Y + +YLI+T Sbjct: 183 INSYLVVGVMYLIIT 197 >gi|229588678|ref|YP_002870797.1| glutamate/aspartate ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229360544|emb|CAY47401.1| glutamate/aspartate ABC transport system, permease [Pseudomonas fluorescens SBW25] Length = 248 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 54/175 (30%), Positives = 101/175 (57%), Gaps = 15/175 (8%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A + T+ IA ++++I+L++G + V+R + ++S I YV +FR PLLVQLF+ + Sbjct: 27 AGLGWTIAIAVVAWIIALLLGSILGVMRTV-PNRLVSGIATCYVELFRNVPLLVQLFIWY 85 Query: 79 YGLPH-------------IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 + +P + +++++++ L L +A + E +R+ I ++P+GQ A+ Sbjct: 86 FLVPDMLPQNLQDWYKQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQALPRGQESAA 145 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 A+G Q +++LPQ PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 146 RAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|222102871|ref|YP_002539910.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221739472|gb|ACM40205.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 290 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 59/219 (26%), Positives = 115/219 (52%), Gaps = 13/219 (5%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + +V+TL + + V + G +AV+ + + +L + F VW FRG PL+VQ+F F Sbjct: 64 SGVVLTLQLTSGAMVFGIAFGCIVAVMATSQNIVLKALAIAF-VWWFRGVPLIVQIFFWF 122 Query: 79 Y---GLPHIGI---------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 +P +GI + +A ++L L+ +A +SEIIR + ++ +GQ +A+ Sbjct: 123 NIALFIPEVGIGSYSISINALVTPALAGFLALGLHEAANMSEIIRGGLTAVDRGQREAAS 182 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL QT+R ++LPQ + P ++ I +LK++++ S I + ++ AQ I + + Sbjct: 183 SLGLRPLQTLRTVVLPQAVRLIVPPTGNQAIGMLKASAIVSVIGMQDLLTQAQAIYARNF 242 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + + C + YL++T+ I Q +E + + Sbjct: 243 LVIELLCVASLWYLLITTLASIGQYFLEKHLAPKGRNAG 281 >gi|156934834|ref|YP_001438750.1| hypothetical protein ESA_02682 [Cronobacter sakazakii ATCC BAA-894] gi|156533088|gb|ABU77914.1| hypothetical protein ESA_02682 [Cronobacter sakazakii ATCC BAA-894] Length = 246 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 117/214 (54%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++ +++I+ ++G ++R + +S I YV +FR PL+VQ F Sbjct: 25 LWSGFQVTVALSISAWIIAFLVGSLFGILRTV-PNRFLSGIGTCYVELFRNVPLIVQFFT 83 Query: 77 IFYGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P ++G+ F + F++ +I L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVVPELLPENLGMWFKAELDPNVQFFLSSMICLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+ + + ++ +E V Sbjct: 204 YSAHAWESFTAITLAYVFINAVIMLVMNLVERKV 237 >gi|307131834|ref|YP_003883850.1| histidine/lysine/arginine/ornithine ABC transporter membrane protein [Dickeya dadantii 3937] gi|306529363|gb|ADM99293.1| histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily [Dickeya dadantii 3937] Length = 238 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 95/173 (54%), Gaps = 10/173 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEII 110 + ++FRGTPL VQL V + G+ + IV ++F I++L LN AY +EI Sbjct: 62 FTYVFRGTPLYVQLLVFYSGVYSLEIVRGTDLLNAFFRSGLNCAILALALNTCAYTTEIF 121 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +I S+P G+ +A+ A G +R + R +ILP + + S+E I +L ST++A T+T Sbjct: 122 AGAIRSVPHGEIEAARAYGFSRFKQYRCVILPGALRIALPAYSNEVILMLHSTALAFTVT 181 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 +P++ + A+ I + TYQP + +YL ++ + K E +H ++ Sbjct: 182 VPDLLKVARDINAATYQPFYAFGIAGVMYLAVSFVLISLFRKAERRWLRHLHT 234 >gi|206559443|ref|YP_002230204.1| histidine transport system permease [Burkholderia cenocepacia J2315] gi|198035481|emb|CAR51359.1| histidine transport system permease protein [Burkholderia cenocepacia J2315] Length = 237 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 106/196 (54%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S + + +AV R+ + +S+ + FY ++FRGTPL VQL +++ Sbjct: 21 SGLAVTLWLLVASISLGFVCAVPLAVARVS-KNKWVSMPVRFYTYVFRGTPLYVQLLLMY 79 Query: 79 YGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D+F I++ LN AY +EI +I +IP G+ +A+ A Sbjct: 80 TGMYSLEFVRSHSLLDAFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++ R +ILP + A+PL S+E I +L +T+VA T T+P+I + A+ S TY Sbjct: 140 GMSPFTMYRRVILPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYM 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL ++ Sbjct: 199 AFQSFGIAALIYLAVS 214 >gi|329906186|ref|ZP_08274377.1| Glutamate Aspartate transport system permease protein gltJ [Oxalobacteraceae bacterium IMCC9480] gi|327547319|gb|EGF32155.1| Glutamate Aspartate transport system permease protein gltJ [Oxalobacteraceae bacterium IMCC9480] Length = 247 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 61/205 (29%), Positives = 107/205 (52%), Gaps = 19/205 (9%) Query: 1 MKYEWFNLI--------IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT 52 M Y W I + ++ L + +V TL A ++V++L IG + IR + Sbjct: 1 MNYNWNWQIFWAPSPDGVGTYMDTLVSGLVWTLATALTAWVMALFIGAIVGTIRTMPNRW 60 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNF 102 + L + YV +FR PLLVQ+F+ ++ +P + + F+ +I L Sbjct: 61 AVRLA-NGYVELFRNIPLLVQMFLWYFVMPELVPASMGNWLKAMPNAPFITAVICLGFFT 119 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 S+ ++ + + I ++P+GQ A A+GLT QT RH++LP PL+SEF++I+K+ Sbjct: 120 SSRVAVQVSAGIQALPRGQTLAGTALGLTLPQTYRHVLLPMAFRIVLPPLTSEFLNIIKN 179 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQ 187 +SVA TI + E+ A+ + ++Q Sbjct: 180 SSVALTIGLMELTARARSMSEFSFQ 204 >gi|269120482|ref|YP_003308659.1| polar amino acid ABC transporter inner membrane subunit [Sebaldella termitidis ATCC 33386] gi|268614360|gb|ACZ08728.1| polar amino acid ABC transporter, inner membrane subunit [Sebaldella termitidis ATCC 33386] Length = 239 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 114/229 (49%), Gaps = 19/229 (8%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS------DTIISLIMHF-- 60 II S + L + +TL I S + S +IG I +R + +T+I ++ Sbjct: 10 IIASSHKELLDGLRLTLIITFFSLIFSTLIGIGIGYLRSLTTKQKNLYNTVIKVLQFLAK 69 Query: 61 -YVWIFRGTPLLVQLFVIFYGL------PHIGIVF----DSFVAIIISLTLNFSAYISEI 109 Y+ I RGTPL+VQ F + L P I I F + +A +I ++LN AY++EI Sbjct: 70 EYIDIIRGTPLIVQAFFFYLALVPLIVNPLIKIWFPTGMSAEIAGVIIISLNAGAYMAEI 129 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R I +I KGQ +A+ ++GL K +R ++LPQ + + ++FI LK TS+ + I Sbjct: 130 FRGGIQAIDKGQMEAARSLGLPYKHAMRKVVLPQAVKNMIPAILNQFIISLKDTSLLTII 189 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 +PE+ + I + Y+ Y + +Y ++ + KIE + Sbjct: 190 GVPELTGNGKTISAANYKYFETYLIIGIMYYVIIKVLSFVFSKIEEKLN 238 >gi|260425536|ref|ZP_05779516.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Citreicella sp. SE45] gi|260423476|gb|EEX16726.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Citreicella sp. SE45] Length = 263 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 120/222 (54%), Gaps = 21/222 (9%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIFRGTPLLVQL- 74 L + VT+ + +SF ++ +G +A++ + SD + + FY I RG P+LV L Sbjct: 40 LAKGVQVTVFVTLVSFALASALGMGVALMSL--SDHRLPRQLARFYTEIVRGIPMLVLLL 97 Query: 75 FVIF-----------YGLPHIGIV------FDSFVAIIISLTLNFSAYISEIIRSSIISI 117 +V F + L +G+ F I++LT+ +SA+I+E+ R+ ++S+ Sbjct: 98 YVAFVLAPALVELRNWALGWLGVEPARTRDFPLVWRAILALTIGYSAFIAEVFRAGLLSV 157 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 +GQ +A+ A+GL+R Q R I+LPQ I T PL ++F++++K +S+ S + + ++ Q Sbjct: 158 DEGQVEAAQALGLSRYQRFRLIVLPQAIRTILPPLGNDFVAMVKDSSLVSVLGVLDVTQL 217 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + + ++ Y +A +YL +T + ++E+ + + Sbjct: 218 GKVTAAGNFRYFETYNVVALIYLTMTITLSLALRRLEARLRE 259 >gi|15890314|ref|NP_355986.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15158517|gb|AAK88771.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 221 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 107/203 (52%), Gaps = 4/203 (1%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W N + + PQLL A VVTL IA +S VI L + + R+ + ++ +V Sbjct: 6 FHW-NQALKALPQLLDGA-VVTLQIAILSMVIGLSFAILLTLFRLS-GNRVLGAFAAVWV 62 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R TP L Q+++ +GL + GI + A+++ + N + Y++E R ++ +IP Q Sbjct: 63 EIARNTPALFQIYMAHFGLGNFGIHLSPYTALLVGIAFNNAGYLAENFRGALKAIPDTQT 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP-EIFQTAQRI 181 + ++G+T QT R II+PQ + + +P +++ + + TS+ T+ + ++ Q + Sbjct: 123 RSGRSLGMTSMQTFRLIIMPQMLRVAFLPATNQMVWAILMTSLGVTVGMNTDLAGVTQAL 182 Query: 182 VSTTYQPLIIYCELAFVYLILTS 204 + +++ + A +Y ++ Sbjct: 183 NARSFRTFEFFALAAVIYYVIAK 205 >gi|315639993|ref|ZP_07895120.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] gi|315484255|gb|EFU74724.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] Length = 226 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 115/217 (52%), Gaps = 9/217 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVIS--LIIGFFIAVIRIFFSDTIISLIMHFYVW 63 F LI S P +L I TL IA ISF+I L I F + + R + + + FYV Sbjct: 12 FQLIWQSLPYVL-KGIPYTLGIALISFIIGNLLAIAFTLLLER---AIAPVRWFIRFYVS 67 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RG P++V LF+ ++G+P + + A +S +L+ SA+++EI R ++ + GQ D Sbjct: 68 FLRGIPMIVLLFLFYFGMP---VQLTAIQASCLSFSLSSSAFLTEIYRGALAGVDSGQRD 124 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A YA+G + Q +R +I PQ T+ L + + +LK TS+ + I++P+IFQ A+ + Sbjct: 125 AGYALGFSYYQLMRQVIFPQAFVTTVPALGNVAMDVLKGTSLTAMISVPDIFQLAKIVGG 184 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + +Y + +Y +L Q K E+ + + Sbjct: 185 RQFDFFSMYILVGILYWLLCLLIGAGQKKAETYLLKK 221 >gi|291616874|ref|YP_003519616.1| ArtM [Pantoea ananatis LMG 20103] gi|291151904|gb|ADD76488.1| ArtM [Pantoea ananatis LMG 20103] gi|327393300|dbj|BAK10722.1| arginine transport system permease protein ArtM [Pantoea ananatis AJ13355] Length = 222 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 53/173 (30%), Positives = 97/173 (56%), Gaps = 12/173 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYG---------LPHI-GIVFDSFVAIIISLTLNF 102 + S ++ ++ +F GTPLLVQ+F+I+YG LP + ++ ++ +++L+LN Sbjct: 43 LFSPLVKGFITLFTGTPLLVQIFLIYYGPGQFPSLQTLPWLWHLLSQPWLCAMLALSLNS 102 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +++ ++ +IP GQW + A+G+T +QT+R I+LP + S+E + + K Sbjct: 103 AAYTTQLFYGAVRAIPAGQWQSCEALGMTPRQTLR-ILLPYAFKRALSSYSNEVVLVFKG 161 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 TS+A TIT+ E+ Q + TY + +Y +YL + I+ IE Sbjct: 162 TSLAFTITLMEVMGHGQLLYGRTYD-VTVYAAAGLIYLCVNGLLTIMMRLIEK 213 >gi|227327759|ref|ZP_03831783.1| amino acid ABC transporter [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 254 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 93/170 (54%), Gaps = 31/170 (18%) Query: 61 YVWIFRGTPLLVQLFVIFYGL------PHIGIV-----------------FDSFVAIIIS 97 Y+ FRGTPL VQ+ V+ + L P G++ + +F++ +++ Sbjct: 69 YISAFRGTPLFVQIMVVHFALVPLFINPRDGLLVTSNIMSVDFARTLRSDYGAFLSCVVA 128 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 +TLN AY+SEI R+ I SI GQ +AS ++G++ +T+R +ILPQ PL + I Sbjct: 129 ITLNAGAYVSEIFRAGIQSIDHGQMEASRSLGMSYGRTMRKVILPQAFRRMLPPLGNNAI 188 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTY----QPLIIYCELAFVYLILT 203 +I+K +S+AS I + ++ A R VS Y +P Y ++ VY ++T Sbjct: 189 AIVKDSSLASAIGLADL-AYAARTVSGAYATYWEP---YLTISIVYWVIT 234 >gi|186895949|ref|YP_001873061.1| glutamine ABC transporter permease [Yersinia pseudotuberculosis PB1/+] gi|186698975|gb|ACC89604.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis PB1/+] Length = 218 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 89/141 (63%), Gaps = 1/141 (0%) Query: 64 IFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTP++VQ+ I++ LP I + D F A ++++ +N AYI+EI R +++SI G Sbjct: 61 LIRGTPIVVQVMFIYFALPMMIPLRIDPFSAAVVTIIINSGAYIAEITRGAVLSIHSGFR 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A A+GL+++ T+ ++I P + PL +++I +K TS+ I + E+ + +Q I+ Sbjct: 121 EAGLALGLSQRGTLLYVIAPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQSQEII 180 Query: 183 STTYQPLIIYCELAFVYLILT 203 + ++ + I+ +A +YLI+T Sbjct: 181 AGNFRAMEIWSAVAVIYLIIT 201 >gi|161504172|ref|YP_001571284.1| hypothetical protein SARI_02279 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865519|gb|ABX22142.1| hypothetical protein SARI_02279 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 246 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 118/214 (55%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ +IG ++R + +S + YV +FR PL+VQ F Sbjct: 25 IWSGFQVTVALSITAWIIAFLIGSIFGILRTV-PNRFLSGLGALYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPHI-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P + G+ F + F++ +I L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVVPELLPEDLGMWFKAELDPNIQFFLSSMICLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 204 YSAHAWESFTAITLAYVLINAVIMLVMSLVERKV 237 >gi|153949784|ref|YP_001403106.1| polar amino acid ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|152961279|gb|ABS48740.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pseudotuberculosis IP 31758] Length = 245 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 109/203 (53%), Gaps = 29/203 (14%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWI 64 L+ + L+ ++TL I+ + V + ++GF +A R D+ + + F Y + Sbjct: 10 LLAPQYLGWLWDGFLLTLWISACTVVAATLLGFLLAAAR----DSELKALKGFAIGYSAL 65 Query: 65 FRGTPLLVQLFVIFYGL--------------PHIGIVFD--------SFVAIIISLTLNF 102 FR TPLL+QLF ++ PH V + F+A + LTL Sbjct: 66 FRNTPLLIQLFFWYFAASQFLPASWIPWLNTPHEITVAELTLAWPSFEFLAGFVGLTLYS 125 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +A+I+E +R+ I + KGQ A++A+GLT Q++R+++LPQ + + PL ++++I+K+ Sbjct: 126 TAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMRYVVLPQALKIAMPPLLGQYMNIIKN 185 Query: 163 TSVASTITIPEIFQTAQRIVSTT 185 +S+A I + E+ ++++ + T Sbjct: 186 SSLAMAIGVAELSYASRQVETET 208 >gi|330889550|gb|EGH22211.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] Length = 248 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 57/170 (33%), Positives = 98/170 (57%), Gaps = 15/170 (8%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ IA ++++I+LI+G + V+R S ++S I YV IFR PLLVQL + ++ +P Sbjct: 32 TIAIAVVAWIIALILGSVLGVMRTVPSR-LVSGIATVYVEIFRNVPLLVQLLIWYFLVPD 90 Query: 84 I-------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + +F+++++ L L +A + E +R+ I ++PKGQ A+ A+G Sbjct: 91 LLPENLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGF 150 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 Q +++LPQ PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 151 KLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|222087540|ref|YP_002546077.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221724988|gb|ACM28144.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 274 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 105/194 (54%), Gaps = 23/194 (11%) Query: 50 SDTII-SLIMHFYVWIFRGTPLLVQL-FVIFYGLPHIGIVFDSFVA-------------- 93 SD++I I FYV + RG P+LV L ++ F G P ++++ + Sbjct: 78 SDSLILRQIARFYVEVIRGIPILVLLSYIAFVGAPAFVALYNTATSPLASAGWTEPLLVR 137 Query: 94 -------IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 I++L + ++A+I+E+ R+ I ++ GQ +A+ A+GL+R + RH+I PQ Sbjct: 138 DVPLMWRAIVALMIAYAAFIAEVFRAGIQAVDPGQIEAAKALGLSRYRRFRHVIAPQAFR 197 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFC 206 PLS++FI+++K +S+ S + + +I Q A+ S +++ Y LA++YLILT Sbjct: 198 VIFPPLSNDFIAMVKDSSLVSVLGVADITQLAKIYSSGSFRYFESYSILAYIYLILTIGL 257 Query: 207 YIIQIKIESSVTQH 220 ++ K E + + Sbjct: 258 SLVLRKFEKRMRER 271 >gi|104774800|ref|YP_619780.1| glutamine ABC transporter, substrate binding / permease protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423881|emb|CAI98922.1| Glutamine ABC transporter, substrate binding / permease protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 486 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 111/214 (51%), Gaps = 7/214 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 LI D+ LL + +T+ ++ + + +L+ G + ++ I + + ++IF Sbjct: 274 LGLIKDNAGALL-QGLWMTIELSIVGILAALVFGLILGIMGIA-EHKFWHGLANVIIYIF 331 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RG P++V F I+ G+P + G F A I++L L+ AYI I+R S+ GQW+A Sbjct: 332 RGIPMMVLAFFIYIGMPTLLGHKLPLFTAGILTLMLDEGAYIGAIVRGGFESVDVGQWEA 391 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++GL + + ++ PQ L ++FI LK TS+ S I + ++ QT +++ Sbjct: 392 ARSLGLPYYKALWKVVAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGANLIAQ 451 Query: 185 TYQPLIIYCELAFVYLI----LTSFCYIIQIKIE 214 +Q ++ +A +YLI LT IQ K++ Sbjct: 452 NFQGFKMWLIIAVMYLIIITLLTWLSNYIQKKMQ 485 >gi|331700614|ref|YP_004397573.1| polar amino acid ABC transporter inner membrane subunit [Lactobacillus buchneri NRRL B-30929] gi|329127957|gb|AEB72510.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus buchneri NRRL B-30929] Length = 220 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 77/140 (55%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 +F ++ + YV + R TPLL+QLF ++Y P IGI F + + II L +Y++ Sbjct: 44 YFKVPVLHQVASIYVEVSRNTPLLIQLFFLYYAFPVIGIKFGAELCGIIGLIFLGGSYMA 103 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E + KGQ ++ AIGL+R Q R+I+ PQ + +++ I ++K TS+ + Sbjct: 104 EGFTGGFNGVSKGQLESGKAIGLSRWQLARYIVFPQGFSLGVPAMAANVIFLIKETSIFT 163 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I IPE+ TA ++ Y+ Sbjct: 164 VIAIPELTNTALDLIGMYYR 183 >gi|317403730|gb|EFV84215.1| amino acid ABC transporter [Achromobacter xylosoxidans C54] Length = 230 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 107/203 (52%), Gaps = 6/203 (2%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W I+ + +V TL A S V+S++ G +A+ + + + YV Sbjct: 8 YNWR--IVGQYTGQFATGLVNTLIAAGASLVLSVLAGIPLALAHMSARAWVWRPVAG-YV 64 Query: 63 WIFRGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 R TPLLVQ+++++Y +P + + + I+++TL+ +AY+SEIIR I S+P+ Sbjct: 65 QFIRSTPLLVQIYLVYYAVPMLVPGAKGWSEMLLGILAMTLHHAAYMSEIIRVGIESVPR 124 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ + + A G+ Q +R+++LPQ + PL + ++K TS+ S IT+ E+ Sbjct: 125 GQIEGAKACGMNYHQRLRYVVLPQAFANTLPPLLGQTAVLIKDTSLLSLITVFELVAAGV 184 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 ++ S P + +A YL++ Sbjct: 185 QMNSERIVPTESFLTIAAGYLLI 207 >gi|319899107|ref|YP_004159200.1| glutamate/aspartate transport system permease protein GltJ [Bartonella clarridgeiae 73] gi|319403071|emb|CBI76626.1| glutamate/aspartate transport system permease protein GltJ [Bartonella clarridgeiae 73] Length = 250 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 105/191 (54%), Gaps = 7/191 (3%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIIS----LIMHFYVWIFRGTPLLVQLFVIFYGLPHI-- 84 S ++++ +G I +IR +II+ I F+V R PLLVQ+F+ ++ +P I Sbjct: 47 SLILAVFVGVIIGMIRTLPKTSIINSFLRAIGAFWVETMRNIPLLVQVFLWYFVVPKIYP 106 Query: 85 -GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + F + I +L SA I+E IRS I SIP GQ A+ A+G Q+ R+IILP+ Sbjct: 107 PAMNFPPILLITCALGFFTSARIAEQIRSGIESIPSGQRYAAMAMGFNTYQSYRYIILPR 166 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I T PL+SE + I+K++S+A ++I E+ Q + + Y + +Y++++ Sbjct: 167 AIRTIMPPLTSEAMGIVKNSSIAFAVSINELMQFQYQTIEEVSHVYENYLLVTILYILIS 226 Query: 204 SFCYIIQIKIE 214 F ++I IE Sbjct: 227 LFIFVIMTIIE 237 >gi|297570733|ref|YP_003696507.1| polar amino acid ABC transporter inner membrane protein [Arcanobacterium haemolyticum DSM 20595] gi|296931080|gb|ADH91888.1| polar amino acid ABC transporter, inner membrane subunit [Arcanobacterium haemolyticum DSM 20595] Length = 323 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 120/242 (49%), Gaps = 33/242 (13%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 +++W + + F + A+ TL + + V+ +I+ +A++R + ++ + Y Sbjct: 43 QFQWDVVWANLFKIQIVKAVGWTLALTVAAMVLGIILAVTMAIMR-RSENPVLRSVATAY 101 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDS---------------------------FVAI 94 +W FRGTP+ QL IF+GL IG +F + F+ Sbjct: 102 IWFFRGTPIYTQL--IFWGL--IGTLFPTITVGIPGVIDFFTFAPNTIFAERQYTMFLFA 157 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 ++ L LN AY++EI+RS + S+ GQ +A+ A+G++ +R I+LPQ + P + Sbjct: 158 VLGLGLNEGAYLAEIVRSGLNSVDPGQEEAAKALGMSNGMILRRIVLPQAMRVIVPPTGN 217 Query: 155 EFISILKSTSVASTITIP-EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKI 213 E IS+LK+TS+ + + + E+ ++++P+ A YL++TS + Q + Sbjct: 218 ETISMLKTTSLVTAVPLSLELTHVTNASGFSSFKPIPFLIVAAIWYLVITSVLMVGQYYL 277 Query: 214 ES 215 E Sbjct: 278 EK 279 >gi|270290756|ref|ZP_06196980.1| glutamine transport system permease [Pediococcus acidilactici 7_4] gi|270280816|gb|EFA26650.1| glutamine transport system permease [Pediococcus acidilactici 7_4] Length = 216 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 1/187 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ + TL + I+ SL+IG A++ + S + I YV + R PLLV Sbjct: 12 LFSGLGQTLLCSLIALFFSLVIGSLFAIMEVLPSR-LARTIGRIYVEVVRNIPLLVVTMF 70 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 + +P + F A I LT+ SA+I+E +R+ I S+ GQ +A+ + G+T Q + Sbjct: 71 FYIVIPRYIPAVNGFTAGTIGLTIYTSAFIAETVRAGIQSVSGGQMEAARSNGMTFSQAM 130 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 R+I+LPQ PL ++FI+++K++SV + + ++ I STT+ + Y + Sbjct: 131 RYIVLPQAFKIVIPPLGNQFINLVKNSSVLAFVAGFDLMYVGNDIASTTFDTINSYLVVG 190 Query: 197 FVYLILT 203 +YLI+T Sbjct: 191 VLYLIIT 197 >gi|294629522|ref|ZP_06708082.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. e14] gi|292832855|gb|EFF91204.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. e14] Length = 344 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 94/181 (51%), Gaps = 9/181 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI---ISLIM 58 ++W + D P ++VTL + VIS +G A++ + + + + Sbjct: 130 NWDW-GAVRDFMPHF-RDGLLVTLQALALGSVISFALGLVWALLMRAPTRWVRWPVGAVT 187 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 F R TPLLVQLF +FY LP G+ F + + ++ L++S Y ++ R+ I ++P Sbjct: 188 EF----VRNTPLLVQLFFLFYVLPEWGLTFSALTTGVFAIGLHYSTYTMQVYRAGIEAVP 243 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQW+A+ A+ L R++T +ILPQ I L + IS+LK T + IT+ E+ A Sbjct: 244 AGQWEAATALNLPRRRTWTAVILPQAIRRVVPALGNYVISMLKDTPMLMAITVLEMLGQA 303 Query: 179 Q 179 + Sbjct: 304 R 304 >gi|254252792|ref|ZP_04946110.1| Amino acid ABC transporter permease protein [Burkholderia dolosa AUO158] gi|124895401|gb|EAY69281.1| Amino acid ABC transporter permease protein [Burkholderia dolosa AUO158] Length = 237 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 106/196 (54%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S + + +AV R+ +S+ + FY ++FRGTPL VQL +++ Sbjct: 21 SGLAVTLWLLVASVSLGFVCAVPLAVARVS-KKKWVSMPVRFYTYVFRGTPLYVQLLLMY 79 Query: 79 YGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D+F I++ LN AY +EI +I +IP G+ +A+ A Sbjct: 80 TGMYSLEFVRSHSLLDAFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G+T + +ILP + A+PL S+E I +L +T+VA T T+P+I + A+ STTY Sbjct: 140 GMTPFTMYQRVILPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSTTYM 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL ++ Sbjct: 199 AFQSFGIAALIYLAVS 214 >gi|289672220|ref|ZP_06493110.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae FF5] Length = 188 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 87/154 (56%), Gaps = 11/154 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIGIVFD-------SFVAIIISLTLNFSAYISEI 109 Y + RG P L+ + +I++G + +G +FD +F A +I+L + F AY +E+ Sbjct: 12 YSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFAAGVIALGICFGAYATEV 71 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +I++IPKG +A A+G++R + + ++LPQ + L + F+ ++K T++ S I Sbjct: 72 FRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNLFMILMKDTALVSVI 131 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + EI + AQ V T Q Y AF+YL LT Sbjct: 132 GLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLT 165 >gi|260574100|ref|ZP_05842105.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sp. SW2] gi|259023566|gb|EEW26857.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sp. SW2] Length = 266 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 58/225 (25%), Positives = 116/225 (51%), Gaps = 23/225 (10%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQL 74 L I +T+ + + F ++ +IG +A+ ++L FYV + RG P++V L Sbjct: 42 LSKGIRITVFVTLVGFALACLIGLGLALAA---QSRFLALRQAARFYVEVVRGVPIIVLL 98 Query: 75 -FVIFYGLPHIGIV---------FDSFVA--------IIISLTLNFSAYISEIIRSSIIS 116 +V F P + + FD + +I+LTL ++A+++E+ R+ ++S Sbjct: 99 LYVAFAATPALVLAWNWATGPLGFDPLKSRDFSLLWRAVIALTLAYAAFLAEVFRAGLLS 158 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + KGQ +A+ A+GL Q RHI+ PQ T PL ++F++++K +S+ S + + ++ Q Sbjct: 159 VDKGQIEAAQALGLNGWQRFRHIVFPQAFRTILPPLGNDFVAMVKDSSLVSVLGVADVTQ 218 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + + ++ Y +A +YL +T + K+E+ + Q + Sbjct: 219 LGKVTSAGNFRYFETYNVVALIYLTMTVTLSLGLRKLEARLRQRS 263 >gi|22125091|ref|NP_668514.1| glutamate/aspartate ABC transport system inner membrane permease [Yersinia pestis KIM 10] gi|45440929|ref|NP_992468.1| putative glutamate/aspartate transport system permease [Yersinia pestis biovar Microtus str. 91001] gi|21957946|gb|AAM84765.1|AE013722_4 glutamate/aspartate ABC transport system inner membrane permease [Yersinia pestis KIM 10] gi|45435788|gb|AAS61345.1| putative glutamate/aspartate transport system permease [Yersinia pestis biovar Microtus str. 91001] Length = 263 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 115/214 (53%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ ++VI+ +G ++R + I+S I YV +FR PL+VQ F Sbjct: 42 IWSGFQVTVALSLCAWVIAFFVGSLFGILRTV-PNRILSGIGACYVELFRNVPLIVQFFT 100 Query: 77 IFYGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P ++G F S F++ +I L L +A + E +R+ I S+P+GQ Sbjct: 101 WYLVVPELLPVNLGTWFKSELAPNIQFFLSSMICLGLFTAARVCEQVRAGIQSLPRGQKA 160 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + E+ A +++ Sbjct: 161 AGLAMGLTLTQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAIASTIGLVEMAAQAGKLLD 220 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 221 YSAHAYESFTAITLGYVLINAVIMLLMRLVEKKV 254 >gi|239945338|ref|ZP_04697275.1| putative glutamate ABC transporter permease protein [Streptomyces roseosporus NRRL 15998] gi|239991795|ref|ZP_04712459.1| putative glutamate ABC transporter permease protein [Streptomyces roseosporus NRRL 11379] gi|291448800|ref|ZP_06588190.1| glutamate transporter permease [Streptomyces roseosporus NRRL 15998] gi|291351747|gb|EFE78651.1| glutamate transporter permease [Streptomyces roseosporus NRRL 15998] Length = 214 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 34 ISLIIGFFIAVIRIFFSDTIISLIMHFYVWI--FRGTPLLVQLFVIFYGLPHIGIVFDSF 91 ++L++GF +A R+ + S + VW+ R TPL + F + GLP G+V Sbjct: 28 LALVLGFLMASFRV---APVGSFRVLGTVWVTVLRNTPLTLLFFAVLLGLPRFGLVLPFQ 84 Query: 92 VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP 151 + +I+L SA+I E++RS I ++PKGQ +A+ ++G+ QT+ ++LPQ + P Sbjct: 85 LFAVIALGCYTSAFICEVLRSGINTVPKGQGEAARSLGMNFGQTLSTVVLPQAFRSVIPP 144 Query: 152 LSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + S I++ K++++A ++ E+ T + + Y + + +A YLI+T Sbjct: 145 VGSTLIALAKNSAIAGAFSVTELLGTYKTLNELGYSIIWSFIWIAVGYLIIT 196 >gi|330466433|ref|YP_004404176.1| amino acid permease [Verrucosispora maris AB-18-032] gi|328809404|gb|AEB43576.1| amino acid permease [Verrucosispora maris AB-18-032] Length = 290 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 58/197 (29%), Positives = 104/197 (52%), Gaps = 3/197 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 ++ Q + + TL A + ++SL G AV R+ IS+ V FR PL Sbjct: 59 KTWTQFILPGLWATLKAAGVGMLLSLAFGIIFAVGRLS-EHKWISVPAGAVVEFFRAVPL 117 Query: 71 LVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 L+ +F +FYGLP+ I +F +++I LTL + ++E R+ I ++P GQ +A+YAIG Sbjct: 118 LLMIFFVFYGLPYVIKQPVTAFWSVVIGLTLYNGSVLAEAFRAGIRALPGGQSEAAYAIG 177 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 + + Q ++ I++PQ + S+ + +LK T++ + PE+ Q ++ Y + Sbjct: 178 MRKTQVMQLILIPQAARAMLPIIVSQLVVLLKDTALGYIVAYPELLQRGVNDLAANYGNI 237 Query: 190 IIYCE-LAFVYLILTSF 205 I +A +Y+I+ S Sbjct: 238 IPAAMVIAVIYIIINSM 254 >gi|254451333|ref|ZP_05064770.1| peptidyl-dipeptidase Dcp protein [Octadecabacter antarcticus 238] gi|198265739|gb|EDY90009.1| peptidyl-dipeptidase Dcp protein [Octadecabacter antarcticus 238] Length = 960 Score = 88.2 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 58/220 (26%), Positives = 109/220 (49%), Gaps = 22/220 (10%) Query: 5 WFNLIIDSFPQLLYA---AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 W L D + Q+L I +T+ + + F ++ +G +A++ ++ Y Sbjct: 27 WRVLTDDLYTQVLQTLSKGIWITVFVTLVGFTLAATMGLGLALMSTS-RFIVVRQTARLY 85 Query: 62 VWIFRGTPLLVQL-FVIFYGLPHIGIVFDSFVAI-----------------IISLTLNFS 103 I RG P++V L +V F P + +F+ II+LT+ +S Sbjct: 86 TEIVRGVPIIVLLLYVAFVLAPGMVALFNWITGTLGFDPIRNRDFSLLWRAIIALTIGYS 145 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 A+I+E+ R+ + SI KGQ +A+ A+GL+ + RHI+ PQ PL ++FI+++K + Sbjct: 146 AFIAEVFRAGLQSIEKGQIEAAEALGLSPWRRFRHIVFPQAFRRILPPLGNDFIAMVKDS 205 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 S+ S + + ++ Q + + ++ Y LA +YL +T Sbjct: 206 SLVSVLGVLDVTQAGKITAAGNFRYFESYNVLALIYLTMT 245 >gi|116617272|ref|YP_817643.1| ABC-type amino acid transport system, permease component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096119|gb|ABJ61270.1| amino acid ABC transporter membrane protein 1, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 218 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 53/127 (41%), Positives = 72/127 (56%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV I R TPLL+QLF I+YGLP IGI + II L AY+SE + S+PK Sbjct: 55 YVEIARNTPLLIQLFFIYYGLPSIGIKIPAEETAIIGLIFLGGAYMSEAFLGGLKSVPKV 114 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q ++ IGL+ Q R+II PQ I S L++ I ++K TS+ + I IPEI T Sbjct: 115 QIESGRVIGLSAWQLSRYIIFPQGIVFSLPSLAANIIFLIKETSIFTVIAIPEITNTTLD 174 Query: 181 IVSTTYQ 187 ++ Y+ Sbjct: 175 LIGQNYR 181 >gi|325685063|gb|EGD27198.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 485 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 111/214 (51%), Gaps = 7/214 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 LI D+ LL + +T+ ++ + + +L+ G + ++ I + + ++IF Sbjct: 273 LGLIKDNAGALL-QGLWMTIELSIVGILAALVFGLILGIMGIA-EHKFWHGLANVIIYIF 330 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RG P++V F I+ G+P + G F A I++L L+ AYI I+R S+ GQW+A Sbjct: 331 RGIPMMVLAFFIYIGMPTLLGHKLPLFTAGILTLMLDEGAYIGAIVRGGFESVDVGQWEA 390 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++GL + + ++ PQ L ++FI LK TS+ S I + ++ QT +++ Sbjct: 391 ARSLGLPYYKALWKVVAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGANLIAQ 450 Query: 185 TYQPLIIYCELAFVYLI----LTSFCYIIQIKIE 214 +Q ++ +A +YLI LT IQ K++ Sbjct: 451 NFQGFKMWLIIAVMYLIIITLLTWLSNYIQKKMQ 484 >gi|300811214|ref|ZP_07091721.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497801|gb|EFK32816.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 485 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 111/214 (51%), Gaps = 7/214 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 LI D+ LL + +T+ ++ + + +L+ G + ++ I + + ++IF Sbjct: 273 LGLIKDNAGALL-QGLWMTIELSIVGILAALVFGLILGIMGIA-EHKFWHGLANVIIYIF 330 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RG P++V F I+ G+P + G F A I++L L+ AYI I+R S+ GQW+A Sbjct: 331 RGIPMMVLAFFIYIGMPTLLGHKLPLFTAGILTLMLDEGAYIGAIVRGGFESVDVGQWEA 390 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++GL + + ++ PQ L ++FI LK TS+ S I + ++ QT +++ Sbjct: 391 ARSLGLPYYKALWKVVAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGTNLIAQ 450 Query: 185 TYQPLIIYCELAFVYLI----LTSFCYIIQIKIE 214 +Q ++ +A +YLI LT IQ K++ Sbjct: 451 NFQGFKMWLIIAVMYLIIITLLTWLSNYIQKKMQ 484 >gi|261407769|ref|YP_003244010.1| polar amino acid ABC transporter inner membrane subunit [Paenibacillus sp. Y412MC10] gi|261284232|gb|ACX66203.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. Y412MC10] Length = 219 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 54/145 (37%), Positives = 89/145 (61%), Gaps = 7/145 (4%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYG---LPHIG--IVFDSFVAIIISLTLNFSAYISE 108 ++ + + Y+++FRGTPLL+QL +G LP IG +V D FVA ++ LN++AY +E Sbjct: 49 LAWLANAYIYVFRGTPLLLQLLFFCFGLPVLPVIGEYLVLDRFVAACLAFVLNYAAYFAE 108 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I R +++I KGQ++AS +GL R QT +ILPQ + +S+E I+++K T++ Sbjct: 109 IFRGGLLAIDKGQYEASKVLGLNRWQTTTKVILPQMFRVALPAVSNESITLVKDTALLYA 168 Query: 169 ITIPEIFQTAQRIVST--TYQPLII 191 + +PE+ A V+ T P +I Sbjct: 169 VAVPELLHFAYTAVNRDVTIMPFVI 193 >gi|86360897|ref|YP_472784.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86284999|gb|ABC94057.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 220 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 54/158 (34%), Positives = 90/158 (56%), Gaps = 3/158 (1%) Query: 33 VISLIIGFFIAVIRIFF--SDTIISLI-MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 VIS++IG I ++ F S + +L+ YV + R P+LV + F+ LP +G+ D Sbjct: 29 VISILIGAAIGLVVAFALTSTSRFALVPARVYVTVIRNLPILVLVLFAFFALPQMGLRLD 88 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 + ++ L+L AY++E+ R+ ++SIP+G +A AIGLT Q II P + Sbjct: 89 KMKSFVLVLSLYSGAYLAEVFRAGLLSIPRGLTEAGLAIGLTAMQIRSSIIAPLMLRNVL 148 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 LSS IS+ K TS+A+ I +PE+ A++I +++ Sbjct: 149 PSLSSTIISLFKDTSLAAAIAVPELTFAARKINVESFR 186 >gi|332669706|ref|YP_004452714.1| polar amino acid ABC transporter, inner membrane subunit [Cellulomonas fimi ATCC 484] gi|332338744|gb|AEE45327.1| polar amino acid ABC transporter, inner membrane subunit [Cellulomonas fimi ATCC 484] Length = 343 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 112/213 (52%), Gaps = 27/213 (12%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + ++ V+ +G +A++R+ S + S + YVW+FR PL++QL ++Y L + Sbjct: 99 TIRLTAVAAVVGFGLGTVLALMRLSRSPLLQS-VAWAYVWVFRSVPLILQLL-LWYNLAY 156 Query: 84 I------GIVF-------------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + GI F D F A I+ L L+ +AY SEI+R+ I+ + +GQ +A Sbjct: 157 LYPTLTLGIPFGPAFTEFGTLDVVDKFGAAILGLGLSQAAYSSEIVRAGILGVDQGQHEA 216 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLS-SEFISILKSTSVASTITIPEIFQTAQRIVS 183 + A+G+ R + I+LPQ + T VP S +E I ++K TSV + E+F T I Sbjct: 217 AAALGIPRARQQWRIVLPQAMRT-IVPTSVNEVIGLVKGTSVVYVLAYGELFYTVGVIYG 275 Query: 184 TTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 Q PL++ YL+LT+ + Q +E Sbjct: 276 RNLQVVPLLLVA--GIWYLVLTTVLTVAQFYLE 306 >gi|254302675|ref|ZP_04970033.1| ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322867|gb|EDK88117.1| ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 240 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 49/140 (35%), Positives = 84/140 (60%), Gaps = 5/140 (3%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 FF +I Y+ + R TPLLVQLF +++GLP +G+ F II LT +Y+ Sbjct: 69 FFKKIVIG-----YIELSRNTPLLVQLFFLYFGLPKVGLRFSPEACGIIGLTFLGGSYMI 123 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E RS++ +I K Q +++ ++G+T+ QT+R++ILPQ+ S L++ I +LK TSV S Sbjct: 124 ETFRSALETIDKIQKESALSLGMTKWQTMRYVILPQSFVISLPGLTANIIFLLKETSVFS 183 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I++ ++ + ++ Y+ Sbjct: 184 AISLMDMMFVTRDLIGLYYK 203 >gi|254255035|ref|ZP_04948352.1| ABC-type arginine transport system permease component [Burkholderia dolosa AUO158] gi|124899680|gb|EAY71523.1| ABC-type arginine transport system permease component [Burkholderia dolosa AUO158] Length = 293 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 54/220 (24%), Positives = 108/220 (49%), Gaps = 12/220 (5%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +I F LL+A V T+ +A +S SL++G A ++ S + SL FY + R Sbjct: 64 QMIFQGFGPLLWAGTVETVKLAVLSLAASLVLGLAGAAAKLSTSRMLKSL-GTFYTTLIR 122 Query: 67 GTPLLVQLFVIFYG-----------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 P LV + ++FYG L I D F A +++L + AY +E R + + Sbjct: 123 AVPDLVLMLLLFYGIQILLNDATDLLGREQIDIDPFAAGVVTLGFIYGAYFTETFRGAFL 182 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P+GQ +A +A G++ + R I+ PQ + + + + + ++K+T++ S I + ++ Sbjct: 183 AVPRGQLEAGFAYGMSGWRVFRRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVV 242 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + +Q +T +YL +T+ ++ +++ Sbjct: 243 KASQDAGKSTLDFFFFTLAAGAIYLAITTMSNVVLYRLDK 282 >gi|323356726|ref|YP_004223122.1| amino acid ABC transporter permease [Microbacterium testaceum StLB037] gi|323273097|dbj|BAJ73242.1| ABC-type amino acid transport system, permease component [Microbacterium testaceum StLB037] Length = 299 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 92/160 (57%), Gaps = 7/160 (4%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 +FR P+LV +F+++YG P IGI + + A++I+L + ++E+IR+ + S+P+GQ + Sbjct: 108 VFRAIPVLVFMFLLYYGFPVIGIRMEPYWAVVIALVCYNGSVLAEVIRAGVESLPRGQAE 167 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-----FQTA 178 A YAIGL + +R ++LPQ + + ++ + LK T++ IT PE+ + A Sbjct: 168 AGYAIGLRKAGVMRLVLLPQAVRAMMPVIIAQLVVTLKDTALGFVITYPELLFYAKYIGA 227 Query: 179 QRIVSTTYQPLIIYCELAFVY--LILTSFCYIIQIKIESS 216 Q +V + P I + ++ LIL+ +++ ++ S Sbjct: 228 QPVVGSPIVPATIVVGIIYIALCLILSFVANLVEKRLRRS 267 >gi|171316940|ref|ZP_02906147.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171097864|gb|EDT42684.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 237 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 106/196 (54%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S + + +AV R+ + +S+ + FY ++FRGTPL VQL +++ Sbjct: 21 SGLAVTLWLLVASISLGFVCAVPLAVARVS-KNKWLSMPVRFYTYVFRGTPLYVQLLLMY 79 Query: 79 YGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D+F I++ LN AY +EI +I +IP G+ +A+ A Sbjct: 80 TGMYSLEFVRSHSLLDAFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++ R +ILP + A+PL S+E I +L +T+VA T T+P+I + A+ S TY Sbjct: 140 GMSPFTMYRRVILPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYM 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL ++ Sbjct: 199 AFQSFGIAALIYLAVS 214 >gi|107022253|ref|YP_620580.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116689198|ref|YP_834821.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|170732504|ref|YP_001764451.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|254245860|ref|ZP_04939181.1| Amino acid ABC transporter, permease protein [Burkholderia cenocepacia PC184] gi|105892442|gb|ABF75607.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia cenocepacia AU 1054] gi|116647287|gb|ABK07928.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia cenocepacia HI2424] gi|124870636|gb|EAY62352.1| Amino acid ABC transporter, permease protein [Burkholderia cenocepacia PC184] gi|169815746|gb|ACA90329.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 237 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 106/196 (54%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S + + +AV R+ + +S+ + FY ++FRGTPL VQL +++ Sbjct: 21 SGLAVTLWLLVASISLGFVCAVPLAVARVS-RNKWVSMPVRFYTYVFRGTPLYVQLLLMY 79 Query: 79 YGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D+F I++ LN AY +EI +I +IP G+ +A+ A Sbjct: 80 TGMYSLEFVRSHSLLDAFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++ R +ILP + A+PL S+E I +L +T+VA T T+P+I + A+ S TY Sbjct: 140 GMSPFTMYRRVILPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYM 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL ++ Sbjct: 199 AFQSFGIAALIYLAVS 214 >gi|167841277|ref|ZP_02467961.1| ABC amino acid transporter, inner membrane subunit [Burkholderia thailandensis MSMB43] Length = 217 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 63/189 (33%), Positives = 102/189 (53%), Gaps = 7/189 (3%) Query: 34 ISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVA 93 I + IGF +AV+++F S+ I ++ Y+ FR TP LVQLF+++YG P +G+ A Sbjct: 33 IGIAIGFVVAVLQLF-SNRWIRGVLRAYIECFRSTPFLVQLFILYYGGPALGLTLGPVTA 91 Query: 94 IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS 153 ++ L L AY +E RS SIP G +A+ +GL+R QT+ + LPQ + L+ Sbjct: 92 GVLGLGLYGGAYFAEAFRSGFRSIPPGHLEAAQCLGLSRWQTVWRVQLPQMLVLIVPALT 151 Query: 154 SEFISILKSTSVASTITIPEIFQTAQRIVSTTY---QPLIIYCELAFVYLILTSFCYIIQ 210 + I + K T+V S +T+PE+ I S T+ + L++ C YL L F Sbjct: 152 NLTIVLSKETAVLSIVTVPELTFVLTGIGSETFAFVETLLVLC---VCYLALVEFTSRAG 208 Query: 211 IKIESSVTQ 219 +E+ + + Sbjct: 209 AWVETRLAR 217 >gi|330900967|gb|EGH32386.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] gi|330980616|gb|EGH78719.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 231 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 87/154 (56%), Gaps = 11/154 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIGIVFD-------SFVAIIISLTLNFSAYISEI 109 Y + RG P L+ + +I++G + +G +FD +F A +I+L + F AY +E+ Sbjct: 55 YSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFAAGVIALGICFGAYATEV 114 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +I++IPKG +A A+G++R + + ++LPQ + L + F+ ++K T++ S I Sbjct: 115 FRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNLFMILMKDTALVSVI 174 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + EI + AQ V T Q Y AF+YL LT Sbjct: 175 GLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLT 208 >gi|288922650|ref|ZP_06416826.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EUN1f] gi|288346008|gb|EFC80361.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EUN1f] Length = 285 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 58/192 (30%), Positives = 101/192 (52%), Gaps = 5/192 (2%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 LL+ ++ TL A V ++ +G +A R+ + + + V RG PLL+ +F Sbjct: 62 LLWEGLLDTLRAAATGMVFAVALGVALAFARLS-TRPAVHVPAAALVETLRGLPLLMLIF 120 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 F GLP +G+ +F A+++ LT A +SEI R+ ++SI +GQ +A+ A+GL Q Sbjct: 121 FAFLGLPALGVDLSAFWALVLGLTAYNGAVLSEIFRAGVLSIDRGQTEAAAALGLRGTQI 180 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ---RIVSTTYQPLIIY 192 I PQ + + L S+ +++LK TS+ I E+ + + ++ + Y L IY Sbjct: 181 FALIQFPQAVRRMSPTLVSQLVTLLKDTSLGFVIGYTELLRQGRGAVEVLGSRYA-LPIY 239 Query: 193 CELAFVYLILTS 204 LA +Y+I+ Sbjct: 240 TTLAVIYIIVNG 251 >gi|86357759|ref|YP_469651.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42] gi|86281861|gb|ABC90924.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 232 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 87/150 (58%), Gaps = 10/150 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEII 110 YV++FRG+PLLVQ+F+I+YGL G + + +++LTLN +AY SEI Sbjct: 56 YVFVFRGSPLLVQMFLIYYGLGQFRHGLQDLGVWGFFREPYWCAVLALTLNTAAYCSEIF 115 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R ++++ + +A+ A G++ R IILP I + +E I ++K+T++AS IT Sbjct: 116 RGGLLAVSAQEIEAARACGMSGILLFRRIILPIAIRHALPAYGNEIILMIKATALASVIT 175 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 I E+ A ++++ +++ I+ +YL Sbjct: 176 IMEVTGLAGKLIADSFRAFEIFIVAGAIYL 205 >gi|66048137|ref|YP_237978.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|302187472|ref|ZP_07264145.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae 642] gi|63258844|gb|AAY39940.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] gi|330939295|gb|EGH42690.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] gi|330970705|gb|EGH70771.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 231 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 87/154 (56%), Gaps = 11/154 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIGIVFD-------SFVAIIISLTLNFSAYISEI 109 Y + RG P L+ + +I++G + +G +FD +F A +I+L + F AY +E+ Sbjct: 55 YSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFAAGVIALGICFGAYATEV 114 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +I++IPKG +A A+G++R + + ++LPQ + L + F+ ++K T++ S I Sbjct: 115 FRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNLFMILMKDTALVSVI 174 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + EI + AQ V T Q Y AF+YL LT Sbjct: 175 GLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLT 208 >gi|260597071|ref|YP_003209642.1| glutamate/aspartate transport system permease gltJ [Cronobacter turicensis z3032] gi|260216248|emb|CBA29165.1| Glutamate/aspartate transport system permease protein gltJ [Cronobacter turicensis z3032] Length = 246 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 116/214 (54%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++ +++I+ ++G ++R + +S + YV +FR PL+VQ F Sbjct: 25 LWSGFQVTVALSISAWIIAFLVGSLFGILRTV-PNRFLSALGTCYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPHI-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P + G+ F + F++ +I L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVVPELLPEDLGMWFKAELDPNVQFFLSSMICLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+ + + ++ +E V Sbjct: 204 YSAHAWESFTAITLAYVFINTVIMVVMNLVERKV 237 >gi|51595454|ref|YP_069645.1| ABC glutamate/aspartate transporter, permease subunit gltJ [Yersinia pseudotuberculosis IP 32953] gi|108808476|ref|YP_652392.1| putative glutamate/aspartate transport system permease [Yersinia pestis Antiqua] gi|108811263|ref|YP_647030.1| glutamate/aspartate transport system permease [Yersinia pestis Nepal516] gi|145599902|ref|YP_001163978.1| glutamate/aspartate transport system permease [Yersinia pestis Pestoides F] gi|153948463|ref|YP_001401883.1| glutamate/aspartate ABC transporter permease GltJ [Yersinia pseudotuberculosis IP 31758] gi|166008428|ref|ZP_02229326.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Antiqua str. E1979001] gi|166212579|ref|ZP_02238614.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Antiqua str. B42003004] gi|167399443|ref|ZP_02304967.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167423628|ref|ZP_02315381.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170025232|ref|YP_001721737.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186894485|ref|YP_001871597.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|229895953|ref|ZP_04511123.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|229901501|ref|ZP_04516623.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|270489687|ref|ZP_06206761.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294504418|ref|YP_003568480.1| glutamate/aspartate transport system permease [Yersinia pestis Z176003] gi|51588736|emb|CAH20347.1| ABC glutamate/aspartate transporter, permease subunit gltJ [Yersinia pseudotuberculosis IP 32953] gi|108774911|gb|ABG17430.1| glutamate/aspartate transport system permease [Yersinia pestis Nepal516] gi|108780389|gb|ABG14447.1| putative glutamate/aspartate transport system permease [Yersinia pestis Antiqua] gi|145211598|gb|ABP41005.1| glutamate/aspartate transport system permease [Yersinia pestis Pestoides F] gi|152959958|gb|ABS47419.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pseudotuberculosis IP 31758] gi|165992810|gb|EDR45111.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Antiqua str. E1979001] gi|166206510|gb|EDR50990.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Antiqua str. B42003004] gi|167051947|gb|EDR63355.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057798|gb|EDR67544.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751766|gb|ACA69284.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186697511|gb|ACC88140.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|229681430|gb|EEO77524.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|229700876|gb|EEO88905.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|262362592|gb|ACY59313.1| glutamate/aspartate transport system permease [Yersinia pestis D106004] gi|262366404|gb|ACY62961.1| glutamate/aspartate transport system permease [Yersinia pestis D182038] gi|270338191|gb|EFA48968.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294354877|gb|ADE65218.1| glutamate/aspartate transport system permease [Yersinia pestis Z176003] gi|320016182|gb|ADV99753.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 246 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 115/214 (53%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ ++VI+ +G ++R + I+S I YV +FR PL+VQ F Sbjct: 25 IWSGFQVTVALSLCAWVIAFFVGSLFGILRTV-PNRILSGIGACYVELFRNVPLIVQFFT 83 Query: 77 IFYGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P ++G F S F++ +I L L +A + E +R+ I S+P+GQ Sbjct: 84 WYLVVPELLPVNLGTWFKSELAPNIQFFLSSMICLGLFTAARVCEQVRAGIQSLPRGQKA 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + E+ A +++ Sbjct: 144 AGLAMGLTLTQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAIASTIGLVEMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 204 YSAHAYESFTAITLGYVLINAVIMLLMRLVEKKV 237 >gi|251788998|ref|YP_003003719.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247537619|gb|ACT06240.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 238 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 95/173 (54%), Gaps = 10/173 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEII 110 + ++FRGTPL VQL V + G+ + IV ++F +++L LN AY +EI Sbjct: 62 FTYVFRGTPLYVQLLVFYSGVYSLEIVRGTDLLNAFFRSGLNCAVLALALNTCAYTTEIF 121 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +I S+P G+ +A+ A G +R + R IILP + + S+E I +L STS+A T+T Sbjct: 122 AGAIRSVPHGEIEAARAYGFSRFKQYRCIILPGALRIALPAYSNEVILMLHSTSLAFTVT 181 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 +P++ + A+ I + TY+P + +YL ++ + K E +H ++ Sbjct: 182 VPDLLKVARDINAATYKPFYAFGIAGVMYLAISFVLISLFRKAERRWLRHLHT 234 >gi|319792872|ref|YP_004154512.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315595335|gb|ADU36401.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 223 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 108/193 (55%), Gaps = 3/193 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y++ F+ + ++P LL +T+ ++ I+ V+ L++ F A + + I++ Sbjct: 1 MNYQFQFDAVFAAWP-LLLKGTWITVQLSLIATVLGLVVAIFCAWGKTS-GPGWLRFIVN 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TP LVQLF F+ LP IG+ + A ++++ +N AY +EIIR+ I SIPK Sbjct: 59 AYIEVIRNTPFLVQLFFFFFALPAIGLRWSPQTAALVAMVVNLGAYATEIIRAGIESIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A A+ L + R +I+ + L+S+FI ++ S++V S I+ ++ A Sbjct: 119 GQIEAGRALNLKPWEIFRFVIIKPALKAIYPALTSQFILLMLSSAVVSVISADDLTSVAA 178 Query: 180 RIVSTTYQPLIIY 192 + S T++ IY Sbjct: 179 NLQSQTFRSFEIY 191 >gi|332096852|gb|EGJ01842.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella dysenteriae 155-74] Length = 216 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 105/180 (58%), Gaps = 14/180 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ ++G F ++R + +S + YV +FR PL+VQ F Sbjct: 25 IWSGFQVTIALSICAWIIAFLVGSFFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IGI F + F++ ++ L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVIPELLPEKIGIWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 >gi|42519235|ref|NP_965165.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] gi|41583523|gb|AAS09131.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] Length = 219 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 96/180 (53%), Gaps = 2/180 (1%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +I S PQ + VT+ ++ + + ++++G ++I+ +F +I I+ YV + R Sbjct: 5 IIQQSLPQFV-KGFQVTVWMSFVGIIGAMVVGLCCSLIQ-YFHVPVIDKIVSAYVELARN 62 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QLF ++Y P IG+ + +I L AY++E I K Q ++ A Sbjct: 63 TPLLIQLFFLYYAFPVIGLKMSAITCGLIGLIFLGGAYMAEAFTGGFDGISKNQIESGEA 122 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 IG+++ Q R+++ PQ S +++ I ++K TS+ S I IPE+ TA ++ Y Sbjct: 123 IGMSKWQLARYVVFPQGFALSVPAIAANIIFLIKETSIFSVIAIPELTNTALDLIGLYYH 182 >gi|330505354|ref|YP_004382223.1| amino acid ABC transporter permease [Pseudomonas mendocina NK-01] gi|328919640|gb|AEB60471.1| amino acid ABC transporter permease [Pseudomonas mendocina NK-01] Length = 248 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 96/170 (56%), Gaps = 15/170 (8%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ IA ++I+L +G + V+R + +S + YV IFR PLLVQLF+ ++ +P Sbjct: 32 TIAIALAGWIIALALGSLLGVMRTL-PNRWLSGLATAYVEIFRNVPLLVQLFLWYFLVPD 90 Query: 84 I-------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + +++++++ L L +A + E +R+ I ++PKGQ A+YA+G Sbjct: 91 LLPEPLELWFKQDLNPATSAYLSVVVCLGLFTAARVCEQVRTGIEALPKGQTAAAYAMGF 150 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 Q +++LPQ PL+SEF++I K++SVAS I + E+ QT Q Sbjct: 151 RLPQIYTNVLLPQAYRIIIPPLTSEFLNIFKNSSVASLIGLMELLAQTKQ 200 >gi|326693349|ref|ZP_08230354.1| amino acid ABC transporter periplasmic protein [Leuconostoc argentinum KCTC 3773] Length = 481 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 49/142 (34%), Positives = 81/142 (57%), Gaps = 1/142 (0%) Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 ++IFRG PL+V F I+ GLP + G+ +F A II+L LN AY + ++ +G Sbjct: 322 IYIFRGLPLMVLAFFIYIGLPGLTGVKIPAFTAGIITLILNEGAYTGAFVCGGFEAVNRG 381 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++GL+ Q +R +++PQ + ++FI LK TS+ S I + E+ QT Sbjct: 382 QMEAARSLGLSYSQAMRRVVMPQGLRIMVPSFINQFIITLKDTSILSAIGLLELTQTGSL 441 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 IV+ Q ++ + +YLIL Sbjct: 442 IVARNSQGFRVWAIIGVMYLIL 463 >gi|78063224|ref|YP_373132.1| ABC His/Glu/Gln/Arg/opine transporter, inner membrane subunit [Burkholderia sp. 383] gi|77971109|gb|ABB12488.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia sp. 383] Length = 243 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 55/220 (25%), Positives = 112/220 (50%), Gaps = 12/220 (5%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++I F LL+A V T+ +A +S SL++G A ++ ++ ++ I FY + R Sbjct: 14 HMIFQGFGPLLWAGTVETVKLAVLSLAASLVLGLIGASAKLS-TNRMLKSIGTFYTTLIR 72 Query: 67 GTPLLVQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSII 115 P LV + ++FYG+ +G I D FVA +I+L + AY +E R + + Sbjct: 73 AVPDLVLMLLLFYGIQILLNNVTDMLGWDQIDIDPFVAGVITLGFIYGAYFTETFRGAFL 132 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P+GQ +A +A G++ + R I+ PQ + + + + + ++K+T++ S I + ++ Sbjct: 133 AVPRGQLEAGFAYGMSGWRVFRRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVV 192 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + +Q +T +YL +T+ ++ +E Sbjct: 193 KASQDAGKSTLDFFFFTLAAGAIYLAITTVSNVVLHHLEK 232 >gi|116514929|ref|YP_813835.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116094244|gb|ABJ59397.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 486 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 111/214 (51%), Gaps = 7/214 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 LI D+ LL + +T+ ++ + + +L+ G + ++ I + + ++IF Sbjct: 274 LGLIKDNAGALL-QGLWMTIELSIVGILAALVFGLILGIMGIA-EHKFWHGLANVIIYIF 331 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RG P++V F I+ G+P + G F A I++L L+ AYI I+R S+ GQW+A Sbjct: 332 RGIPMMVLAFFIYIGMPTLLGHKLPLFTAGILTLMLDEGAYIGAIVRGGFESVDVGQWEA 391 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++GL + + ++ PQ L ++FI LK TS+ S I + ++ QT +++ Sbjct: 392 ARSLGLPYYKALWKVVAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGTNLIAQ 451 Query: 185 TYQPLIIYCELAFVYLI----LTSFCYIIQIKIE 214 +Q ++ +A +YLI LT IQ K++ Sbjct: 452 NFQGFKMWLIIAVMYLIIITLLTWLSNYIQKKMQ 485 >gi|325126636|gb|ADY85966.1| Glutamine ABC transporter, substrate binding and permease protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 486 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 111/214 (51%), Gaps = 7/214 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 LI D+ LL + +T+ ++ + + +L+ G + ++ I + + ++IF Sbjct: 274 LGLIKDNAGALL-QGLWMTIELSIVGILAALVFGLILGIMGIA-EHKFWHGLANVIIYIF 331 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RG P++V F I+ G+P + G F A I++L L+ AYI I+R S+ GQW+A Sbjct: 332 RGIPMMVLAFFIYIGMPTLLGHKLPLFTAGILTLMLDEGAYIGAIVRGGFESVDVGQWEA 391 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++GL + + ++ PQ L ++FI LK TS+ S I + ++ QT +++ Sbjct: 392 ARSLGLPYYKALWKVVAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGTNLIAQ 451 Query: 185 TYQPLIIYCELAFVYLI----LTSFCYIIQIKIE 214 +Q ++ +A +YLI LT IQ K++ Sbjct: 452 NFQGFKMWLIIAVMYLIIITLLTWLSNYIQKKMQ 485 >gi|296103994|ref|YP_003614140.1| histidine/lysine/arginine/ornithine transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058453|gb|ADF63191.1| histidine/lysine/arginine/ornithine transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 228 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V++++IG A ++ ++ ++LI Y + RG P L Sbjct: 4 GFSGVILQGALVTLELAISSVVLAVLIGLAGAGAKLS-ANKPLALIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNSVTDAMGMGQIDIDPMVAGIITLGFIYGAYFTETFRGAYMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G T QT R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 HIEAATAYGFTSSQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T++P +YL+ T+ + + +E + D Sbjct: 183 AGKSTWEPFYFAVVCGVIYLVFTTVSNGVLLLLERRYSVGVKRAD 227 >gi|283833087|ref|ZP_06352828.1| amino acid ABC transporter, permease protein [Citrobacter youngae ATCC 29220] gi|291070707|gb|EFE08816.1| amino acid ABC transporter, permease protein [Citrobacter youngae ATCC 29220] Length = 308 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 108/204 (52%), Gaps = 20/204 (9%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY----------GLPHI 84 S+IIG +A+ R+ S +++ + Y+W+FR PL+V L V++ G+P Sbjct: 73 SIIIGGLLALARLS-SSWLLNGLAWGYIWLFRSLPLIVVLIVLYNFSYLYDTLTIGIPFT 131 Query: 85 GIVFDSFVAI---------IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I + SF I ++ LTL SAY +EIIR + + GQ++A+ A+GL + Sbjct: 132 PIQWGSFETINVLGQFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRR 191 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 IILPQ + T +E IS+ K T++ + +PE+F T Q I + T + + + Sbjct: 192 TLRIILPQALRTILPAGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVG 251 Query: 196 AFVYLILTSFCYIIQIKIESSVTQ 219 A YL++TS +IQ +E ++ + Sbjct: 252 AVWYLVITSVLSLIQHIVERALAR 275 >gi|167758443|ref|ZP_02430570.1| hypothetical protein CLOSCI_00783 [Clostridium scindens ATCC 35704] gi|167664340|gb|EDS08470.1| hypothetical protein CLOSCI_00783 [Clostridium scindens ATCC 35704] Length = 216 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 55/172 (31%), Positives = 99/172 (57%), Gaps = 5/172 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++++ I ++ V SL +G +A R+ + + Y+ I RGTPL++QL V Sbjct: 10 LSGGMLISIEIFVLTLVFSLPLGLAVAFGRMS-KIKPVQWLAKIYISIMRGTPLMLQLMV 68 Query: 77 IFYGLPHI-GIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 +++G +I GI S A++I +N++AY +EI R I S+ GQ++A+ +G +R Sbjct: 69 VYFGPYYIFGIRISSTYRMTAVLIGFAINYAAYFAEIYRGGIESMSVGQYEAAKVLGYSR 128 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 QT II PQ I +++E I+++K TS+A + + E+F A++I + Sbjct: 129 PQTFFCIIFPQVIKRILPSVTNEVITLVKDTSLAFVLAVAEMFTIAKQIAAA 180 >gi|313124773|ref|YP_004035032.1| ABC amino acid transporter permease/periplasmic component [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312281336|gb|ADQ62055.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 486 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 111/214 (51%), Gaps = 7/214 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 LI D+ LL + +T+ ++ + + +L+ G + ++ I + + ++IF Sbjct: 274 LGLIKDNAGALL-QGLWMTIELSIVGILAALVFGLILGIMGIA-EHKFWHGLANVIIYIF 331 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RG P++V F I+ G+P + G F A I++L L+ AYI I+R S+ GQW+A Sbjct: 332 RGIPMMVLAFFIYIGMPTLLGHKLPLFTAGILTLMLDEGAYIGAIVRGGFESVDVGQWEA 391 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++GL + + ++ PQ L ++FI LK TS+ S I + ++ QT +++ Sbjct: 392 ARSLGLPYYKALWKVVAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGTNLIAQ 451 Query: 185 TYQPLIIYCELAFVYLI----LTSFCYIIQIKIE 214 +Q ++ +A +YLI LT IQ K++ Sbjct: 452 NFQGFKMWLIIAVMYLIIITLLTWLSNYIQKKMQ 485 >gi|328948377|ref|YP_004365714.1| polar amino acid ABC transporter, inner membrane subunit [Treponema succinifaciens DSM 2489] gi|328448701|gb|AEB14417.1| polar amino acid ABC transporter, inner membrane subunit [Treponema succinifaciens DSM 2489] Length = 222 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 2/188 (1%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 LL + VT+ IA ++ ++ I+G A+ +I + ++ ++ Y + RG PL QL Sbjct: 17 LLLQGLGVTIYIAIVAIILGTILGAVFALFKIS-KNPVLRIVAEIYTTVIRGIPLATQL- 74 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +IFY + + D + ++ +N AY +EI R+ I + GQ +A ++GL QT Sbjct: 75 MIFYFVVFAPLGLDRVLVATLAYGINSGAYCTEIFRAGIQGVDSGQMEAGRSLGLNYWQT 134 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 + II PQ +SEFI ++K TSVAS I + ++ + I + TY I Sbjct: 135 LTMIIFPQAAKAVLPTYTSEFIVLIKETSVASFIAVMDLTKAGDMIRNATYNAWIPLLSC 194 Query: 196 AFVYLILT 203 A +YL LT Sbjct: 195 ALIYLCLT 202 >gi|241113592|ref|YP_002973427.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861800|gb|ACS59466.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 220 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 91/158 (57%), Gaps = 3/158 (1%) Query: 33 VISLIIGFFIAVIRIFF--SDTIISLI-MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 VIS++IG I ++ F S + +++ YV + R P+LV + +F+ LP +G+ D Sbjct: 29 VISILIGAAIGLVVAFALTSKSRFAVVPARVYVTVIRNLPILVLVLFVFFALPQMGLRLD 88 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 + ++ L+L AY++E+ R+ ++SIP+G +A AIGLT Q II P + Sbjct: 89 KIKSFVLVLSLYSGAYLAEVFRAGLLSIPRGLTEAGLAIGLTGMQIRSSIIAPLMLRNVL 148 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 LSS IS+ K TS+A+ I +PE+ A++I +++ Sbjct: 149 PSLSSTIISLFKDTSLAAAIAVPELTFAARKINVESFR 186 >gi|330961754|gb|EGH62014.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 277 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 63/178 (35%), Positives = 107/178 (60%), Gaps = 1/178 (0%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS 97 +GF A+ R+ S + I FY FRGTPLL+Q+ +I+ GLP +GIV + +A +I+ Sbjct: 91 LGFVTALARLS-SSAVAFGIASFYASFFRGTPLLIQILLIYLGLPQVGIVPGAIMAGVIA 149 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 L+LN+ AY+SEI R+ II + GQ +A+ A+ L Q + LPQ + T P +++FI Sbjct: 150 LSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQFI 209 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 S+LK +S+ S + + E+ AQ ++Y+ + + A +Y I++ ++Q ++E Sbjct: 210 SMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLEK 267 >gi|329667255|gb|AEB93203.1| ABC transporter permease component [Lactobacillus johnsonii DPC 6026] Length = 219 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 96/180 (53%), Gaps = 2/180 (1%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +I S PQ + VT+ ++ + + ++++G ++I+ +F +I I+ YV + R Sbjct: 5 IIQQSLPQFV-KGFQVTVWMSFVGIIGAMVVGLCCSLIQ-YFHVPVIDKIVSAYVELARN 62 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QLF ++Y P IG+ + +I L AY++E I K Q ++ A Sbjct: 63 TPLLIQLFFLYYAFPVIGLKMSAITCGLIGLVFLGGAYMAEGFTGGFDGISKNQIESGEA 122 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 IG+++ Q R+++ PQ S +++ I ++K TS+ S I IPE+ TA ++ Y Sbjct: 123 IGMSKWQLARYVVFPQGFALSVPAIAANIIFLIKETSIFSVIAIPELTNTALDLIGLYYH 182 >gi|225019854|ref|ZP_03709046.1| hypothetical protein CLOSTMETH_03808 [Clostridium methylpentosum DSM 5476] gi|224947414|gb|EEG28623.1| hypothetical protein CLOSTMETH_03808 [Clostridium methylpentosum DSM 5476] Length = 220 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 53/157 (33%), Positives = 95/157 (60%), Gaps = 7/157 (4%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIF---YGLPHIG---IVFDSFVAIIISLTLNFSAYIS 107 ++++ Y+++ RGTPLL+QL Y LP IG + + F + ++ +N+SAY + Sbjct: 46 LAMLARAYIYVVRGTPLLLQLLFFCFGLYYLPVIGPAIFISNRFASATVAFIINYSAYFA 105 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 EI R ++++ KGQ++A+ +GL R QT+ II+PQ + LS+E ++++K T++ Sbjct: 106 EIFRGGLLAVDKGQYEAAQVLGLRRGQTMFRIIIPQMVRVCMPTLSNEAVTLVKDTALLY 165 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 ++ + EI A+ IV+ TY + Y A +YLIL + Sbjct: 166 SVGVVEILTQAKTIVNGTYN-ISAYFIAAIIYLILNT 201 >gi|304397039|ref|ZP_07378918.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304355188|gb|EFM19556.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 222 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 12/161 (7%) Query: 64 IFRGTPLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSS 113 +F GTPLLVQ+F+I+YG P I ++ ++ +++L+LN +AY +++ + Sbjct: 54 LFTGTPLLVQIFLIYYGPGQFPSIQQIPWLWHLLSQPWLCAMLALSLNSAAYTTQLFYGA 113 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + +IP GQW + A+G+ RK T+R I+LP + S+E + + K TS+A TIT+ E Sbjct: 114 VRAIPSGQWQSCAALGMGRKDTLR-ILLPYAFKRALSSYSNEVVLVFKGTSLAYTITLME 172 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + Q + TY + +Y +YL + ++ IE Sbjct: 173 VMGHGQLLYGRTYD-ITVYAAAGLIYLCVNGLLTLMMRLIE 212 >gi|288960221|ref|YP_003450561.1| ABC transporter permease protein [Azospirillum sp. B510] gi|288912529|dbj|BAI74017.1| ABC transporter permease protein [Azospirillum sp. B510] Length = 221 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 87/143 (60%), Gaps = 1/143 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V +FR TP+LVQL +Y LP + GI +F A ++L+LN SAY +EI R I S+P Sbjct: 59 FVELFRNTPVLVQLIWFYYALPVLSGIQLPAFAAAALALSLNASAYYAEIYRGGIQSVPA 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A A+G+ R + +R IILP + ++ + + K+TSVAS IT+ E+ TA+ Sbjct: 119 GQWEAGRALGMGRVRLLRRIILPLAVRRMVPAFTNRAVELAKNTSVASIITVHELMYTAR 178 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 S Y P+ + +A +Y +L Sbjct: 179 LFSSQNYIPMETFTVVAMIYFLL 201 >gi|163734792|ref|ZP_02142230.1| glutamate/aspartate ABC transporter, permease protein [Roseobacter litoralis Och 149] gi|161391897|gb|EDQ16228.1| glutamate/aspartate ABC transporter, permease protein [Roseobacter litoralis Och 149] Length = 239 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 105/197 (53%), Gaps = 12/197 (6%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 + W L + + L + T+ +A ++ I+++IG + V + + I I Y Sbjct: 4 NWNWAVLFEEQYLSWLISGFGWTVSVALSAWCIAIVIGVLVGVGKTV-PNRFIRAICATY 62 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-----------GIVFDSFVAIIISLTLNFSAYISEII 110 V +FR PLLVQ+F+ ++ +P + + FV +++L L ++ I+E + Sbjct: 63 VELFRNVPLLVQMFIWYFAVPEMVPDDWGRWMKRDMPNPEFVTAVVALGLYTASRIAEQV 122 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R+ I ++P G A+ A GL QT R+++LP + PL+SEF+++ K++S+A TI Sbjct: 123 RAGIETVPPGLTAAATAHGLNVSQTYRYVLLPISFRMIVPPLTSEFLTVFKNSSLALTIG 182 Query: 171 IPEIFQTAQRIVSTTYQ 187 + E+ +Q+I T+Q Sbjct: 183 LLELTAQSQQIAEYTFQ 199 >gi|325000380|ref|ZP_08121492.1| polar amino acid ABC transporter, inner membrane subunit [Pseudonocardia sp. P1] Length = 306 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 72/235 (30%), Positives = 121/235 (51%), Gaps = 27/235 (11%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF-FSDTIISLIMHF 60 +++W + F + + T+ +A ++ +I ++G +A ++ F T + + Sbjct: 60 RFQWDVVAEHLFDPSVLRGLGTTMLLAVLAMLIGSVLGGALAAAQLSDFGPTRWAATV-- 117 Query: 61 YVWIFRGTPLLVQL---FVIFYGLPHI--GIVFDS-------------FVAIIISLTLNF 102 YV +FRG P LVQL F + Y LP I G+ F A +I L+L Sbjct: 118 YVGVFRGIPPLVQLIFWFNLAYLLPRISIGVPFGPTLLSWDANDLITPLTAGVIGLSLVQ 177 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 SAY++EIIR+ I+ + GQ +A+ A+G T QT IILPQ + P S+FI+++K Sbjct: 178 SAYMAEIIRAGILGVDHGQREAASAMGFTPAQTFFRIILPQAMRVIIPPSGSQFITVVKG 237 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQ--P-LIIYCELAFVYLILTSFCYIIQIKIE 214 T++ S I + ++ + Q I + TY+ P LI+ C YL + + I Q ++E Sbjct: 238 TALVSVIAMNDLLHSVQVIYNQTYEIVPMLIVAC---LWYLTVVTLLTIGQRRLE 289 >gi|190891791|ref|YP_001978333.1| octopine ABC transporter permease [Rhizobium etli CIAT 652] gi|190697070|gb|ACE91155.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 227 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 87/150 (58%), Gaps = 10/150 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEII 110 YV++FRG+PLLVQ+F+I+YGL G + + +++LTLN +AY SEI Sbjct: 51 YVFVFRGSPLLVQMFLIYYGLGQFRHGLQDLGVWGFFREPYWCAVLALTLNTAAYCSEIF 110 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R ++++ + +A+ A G++ R IILP I + +E I ++K+T++AS IT Sbjct: 111 RGGLLAVSAQEIEAARACGMSGILLFRRIILPIAIRHALPAYGNEIILMIKATALASVIT 170 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 I E+ A ++++ +++ I+ +YL Sbjct: 171 IMEVTGLAGKLIADSFRAFEIFIVAGAIYL 200 >gi|317487127|ref|ZP_07945930.1| binding-protein-dependent transport system inner membrane component [Bilophila wadsworthia 3_1_6] gi|316921611|gb|EFV42894.1| binding-protein-dependent transport system inner membrane component [Bilophila wadsworthia 3_1_6] Length = 328 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 60/182 (32%), Positives = 100/182 (54%), Gaps = 2/182 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 LI++++P LL + TL I S V+S+ I IA+IR ++ I + + +V +FR Sbjct: 112 ELIVETWPILL-GGLENTLLIFICSAVLSVTIAPIIAIIRTL-NNPIFNCAIDAFVDVFR 169 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P+LV + I+Y LP + I F A + L L+ A++ E R+ I S+ +G +A+ Sbjct: 170 SLPILVLVIFIYYALPFLEIHSTPFAAGVCGLFLSALAFMIEYFRAGIESVSRGHVEAAR 229 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL QT+R +ILP I PL+ + +LK+T+ S + +PE+ + A IV Sbjct: 230 SLGLGVIQTMRFVILPLAIRVVLPPLTGHLVGLLKATAFVSVVGMPELLKRAMEIVEWKA 289 Query: 187 QP 188 P Sbjct: 290 NP 291 >gi|150375848|ref|YP_001312444.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Sinorhizobium medicae WSM419] gi|150030395|gb|ABR62511.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuC [Sinorhizobium medicae WSM419] Length = 239 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 52/164 (31%), Positives = 87/164 (53%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ FRGT + VQLF ++ LP GI A +++L LN AY +E++R ++ +I + Sbjct: 74 YIEFFRGTSIFVQLFWAYFVLPFAGITLTPLQAGVLALGLNVGAYGAEVVRGAVKAIGRE 133 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A+ LTR Q +RHIILPQ + + I +LK T+V S I++ ++ AQ Sbjct: 134 QREACIALNLTRFQAMRHIILPQALPLMLPTFGNNAIELLKGTAVVSLISLTDMTFQAQV 193 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 + + T LI + + +Y + + +E V++ V Sbjct: 194 VRAQTGSTLIPFATILLLYFAMAWLISMGMRWLERRVSRGLDGV 237 >gi|119944194|ref|YP_941874.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] gi|119862798|gb|ABM02275.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] Length = 216 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 89/168 (52%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 +++ ++ YV + R TP + +F+GLP IGI + A I+ LTLN +A+ SEI R+ Sbjct: 44 VLNGLLAVYVTLIRSTPFVTLALFVFFGLPEIGIDMNPIPAAILVLTLNLTAFSSEIWRA 103 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 ++ + Q +A+ A G++R +T II PQ + PL+SE ++K T + I + Sbjct: 104 ALDNFSSEQLEAAEAYGMSRIKTFWLIIFPQLWRANLGPLTSEITILIKGTPAVAVIGVV 163 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 EI + A RI + TY PL + +Y + Q +E +T+ Sbjct: 164 EITRAASRIGAQTYDPLPPFLMAMILYTLFVVIIVKSQRLLEKKMTKK 211 >gi|126740302|ref|ZP_01755991.1| polar amino acid uptake family ABC transporter, permease protein [Roseobacter sp. SK209-2-6] gi|126718757|gb|EBA15470.1| polar amino acid uptake family ABC transporter, permease protein [Roseobacter sp. SK209-2-6] Length = 258 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 56/177 (31%), Positives = 94/177 (53%), Gaps = 25/177 (14%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI----------------IISLTLNFSAYIS 107 I RGTPLL+Q+++++YGL G +F F I + +LTL+++ Y Sbjct: 88 IIRGTPLLLQIWLLYYGL---GSLFPQFPWIRSSELWPYLRQAWPYAVTALTLSYAGYEG 144 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E++R + S+ KGQ +A+ + G+ R R I LPQ I L E I LK+T + + Sbjct: 145 EVMRGAFSSVAKGQLEAAKSFGMPRFTMFRRIWLPQAIGNVLPTLGGETILQLKATPLVA 204 Query: 168 TITIPEIFQTAQRIVSTT---YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TIT+ EI+ + R+ S T Y+PL++ LA VY+++ + + E+ + + Sbjct: 205 TITVVEIYSVSSRVRSDTFIVYEPLLL---LALVYMVIAGLIGLAFKRFENRLPDRS 258 >gi|327193432|gb|EGE60331.1| octopine ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 232 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 88/154 (57%), Gaps = 10/154 (6%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYI 106 I YV++FRG+PLLVQ+F+I+YGL G + + +++LTLN +AY Sbjct: 52 ITRAYVFVFRGSPLLVQMFLIYYGLGQFRHGLQDLGVWGFFREPYWCAVLALTLNTAAYC 111 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 SEI R ++++ + +A+ A G++ R IILP + + +E I ++K+T++A Sbjct: 112 SEIFRGGVLAVSAQEIEAARACGMSGILLFRRIILPIALRHALPAYGNEIILMIKATALA 171 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 S ITI E+ A ++++ +++ I+ +YL Sbjct: 172 SVITIMEVTGLAGKLIADSFRAFEIFIVAGAIYL 205 >gi|312868947|ref|ZP_07729127.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3] gi|311095511|gb|EFQ53775.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3] Length = 488 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 2/177 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + +T+ + + ++L+ G + V+ + S + + I ++IFRG P++V F Sbjct: 287 LLNGLWMTIQLTIVGIALALVFGLILGVLGVMQS-KVANAISSTIIYIFRGLPMIVLAFF 345 Query: 77 IFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+ GLP+ IG F+A +++L L+ AYI I++ ++ GQW+A+ ++GL ++ Sbjct: 346 IYMGLPNVIGHKVPLFLAGVVTLMLDEGAYIGAIVKGGFDAVDPGQWEAARSLGLPYRKA 405 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 + ++ PQ I L ++FI LK TS+ S I + E+ QT I+S + ++ Sbjct: 406 LVKVVAPQGIKIMVPSLVNQFIITLKDTSILSAIGVMELTQTGTVIISQNMEGFRMW 462 >gi|240850843|ref|YP_002972243.1| glutamate-aspartate ABC transporter permease component GltJ [Bartonella grahamii as4aup] gi|240267966|gb|ACS51554.1| glutamate-aspartate ABC transporter permease component GltJ [Bartonella grahamii as4aup] Length = 250 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/195 (33%), Positives = 107/195 (54%), Gaps = 13/195 (6%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMH----FYVWIFRGTPLLVQLFVIFYGLPHI-- 84 S +++++ G I +R +II+ I +V I R PLLVQ+F+ ++ +P I Sbjct: 47 SLILAVLCGVIIGTMRTLPKTSIINYIFRTIGAIWVEIMRNIPLLVQVFLWYFVVPKIYP 106 Query: 85 -GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + F + I +L SA I+E +RS I +IP GQ A+ A+G T Q+ R+IILP+ Sbjct: 107 PAMKFSPILLITCALGFFTSARIAEQVRSGIEAIPSGQRYAAMAMGFTTYQSYRYIILPR 166 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQ---TAQRIVSTTYQPLIIYCELAFVYL 200 I T PL+SE + I+K++S+A ++I E+ Q A VS Y+ Y + +Y+ Sbjct: 167 AIRTIMPPLTSEAMGIVKNSSIAFAVSINELMQFQYQAIEEVSHVYEN---YLLVTILYI 223 Query: 201 ILTSFCYIIQIKIES 215 ++ F +I+ IE Sbjct: 224 LIALFVFIVMTVIEQ 238 >gi|154495952|ref|ZP_02034648.1| hypothetical protein BACCAP_00233 [Bacteroides capillosus ATCC 29799] gi|150274835|gb|EDN01891.1| hypothetical protein BACCAP_00233 [Bacteroides capillosus ATCC 29799] Length = 255 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 17/178 (9%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYI 106 ISLI VW+ RGTPL++Q+ +FY +P + G F A+ ++ +N++ Y Sbjct: 79 ISLICRLVVWVIRGTPLILQIIALFY-VPGMLDLFTWGGGESSRFAAVAVAFIINYACYF 137 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 SEI R I S+P GQ +A +G+TR Q + L Q I P+S+E I+++K TS+A Sbjct: 138 SEIYRGGIQSVPVGQQEAGQVLGMTRTQIFFKVTLLQMIKRIVPPMSNEIITLVKDTSLA 197 Query: 167 STITIPEI------FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 I++ E+ F + +S PL +A YL+ + ++ ++E + Sbjct: 198 RAISLKEVIWVAESFMKGNQGISGLLWPLFF---VAVYYLVFSGVVTLLLGRLEKKLA 252 >gi|312868069|ref|ZP_07728273.1| ABC transporter, permease protein [Streptococcus parasanguinis F0405] gi|311096473|gb|EFQ54713.1| ABC transporter, permease protein [Streptococcus parasanguinis F0405] Length = 230 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 106/198 (53%), Gaps = 11/198 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 SF L A+ TL + ++ V+ G + ++ D + + + YV+ R TP + Sbjct: 11 SFLPTLVQALPATLALMVLTTVLGSAFGLVLTWAQVS-EDKVGAGLAKGYVFTLRCTPPI 69 Query: 72 VQLFVIFYGLPH-----IGIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 V LF++FYGLP +GI D FV +++++ L F+A ISE+ +++ ++IPKGQ + Sbjct: 70 VLLFLVFYGLPQFLNWWLGIDIDHWSKFVFVLVAMFLLFAAMISEVFKAAYLAIPKGQME 129 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A +IGLT QTI I+LPQ + +++ +++++ ++A TI +I ++S Sbjct: 130 AGLSIGLTPAQTIWRIVLPQAFRVALPNMTTAILNLMRDAALAYTIGFIDIMGAGNNLIS 189 Query: 184 TTYQ--PLIIYCELAFVY 199 L Y +A +Y Sbjct: 190 RNLGNYSLETYTAVAVIY 207 >gi|238750581|ref|ZP_04612081.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia rohdei ATCC 43380] gi|238711229|gb|EEQ03447.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia rohdei ATCC 43380] Length = 239 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 24/151 (15%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGL------PHIGIV-----------------FDSFVAII 95 Y+ RGTPL VQ+ V+ + L P GI+ + +F++ + Sbjct: 51 RIYISAIRGTPLFVQIMVVHFALVPLFINPRDGILVTNGIISSDFARMLRSDYGAFLSCV 110 Query: 96 ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSE 155 +++TLN AY+SEI R+ I SI +GQ +AS ++G++ +T+R +ILPQ PL + Sbjct: 111 VAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLPPLGNN 170 Query: 156 FISILKSTSVASTITIPEIFQTAQRIVSTTY 186 I+I+K +S+AS I + ++ A R VS Y Sbjct: 171 AIAIVKDSSLASAIGLADL-AYAARTVSGAY 200 >gi|161507576|ref|YP_001577530.1| amino acid ABC transporter permease protein [Lactobacillus helveticus DPC 4571] gi|160348565|gb|ABX27239.1| amino acid ABC transporter permease protein [Lactobacillus helveticus DPC 4571] Length = 219 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/140 (36%), Positives = 76/140 (54%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 FF +IS IM YV + R TPLL+QLF ++Y P IGI + V II L AY++ Sbjct: 43 FFKIPVISQIMTAYVELARNTPLLIQLFFLYYAFPVIGIKMSAEVCGIIGLIFLGGAYMA 102 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E I Q ++ A+G++R Q R+++ PQ S L++ I ++K TS+ S Sbjct: 103 EGFTGGFNGISTSQINSGKALGMSRFQLARYVVFPQGFALSLPALTANIIFLIKETSIFS 162 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I IPE+ TA ++ Y+ Sbjct: 163 VIAIPELTNTALDLIGMYYR 182 >gi|189423808|ref|YP_001950985.1| polar amino acid ABC transporter inner membrane protein [Geobacter lovleyi SZ] gi|189420067|gb|ACD94465.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter lovleyi SZ] Length = 515 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 112/215 (52%), Gaps = 17/215 (7%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+I + L+ + T+ I+ + + ++G I +R+ S ++S Y+ I R Sbjct: 296 NIIHERRYLLILDGLKTTVVISVFATLFGTLLGALICFMRMAKS-RLLSAPARLYIAILR 354 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSF-----VAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 GTP+LV L +IFY +VF S + +I+ +NF AY +EI R+ I + KGQ Sbjct: 355 GTPVLVLLMLIFY------VVFASININPVIVAVIAFGMNFGAYTAEIFRTGIEGVEKGQ 408 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A ++G TR T HI+LPQ + EFIS++K TS+ I + ++ + + I Sbjct: 409 TEAGISLGFTRTSTFLHIVLPQMVRRILPVYKGEFISLVKMTSIVGYIAVQDLTKASDII 468 Query: 182 VSTTYQ---PLIIYCELAFV--YLILTSFCYIIQI 211 S T+ PL++ L F+ + ++ S Y+ +I Sbjct: 469 RSRTFDAFFPLVMVAILYFLISWTLMQSLEYLERI 503 >gi|152974369|ref|YP_001373886.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023121|gb|ABS20891.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cytotoxicus NVH 391-98] Length = 233 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 101/180 (56%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + I+ + S ++G IAV+RI ++ I YV R P+++ F ++ P Sbjct: 36 TLLSSVIALIGSFLLGVIIAVMRIT-PIRALNWIGTAYVEFVRNIPIVLIAFAFYFAFPV 94 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ FVA +LT+ +++I+E IR+ I+S+ KGQ +A+ + GLT Q + +++LPQ Sbjct: 95 VGVTLSGFVAGTAALTIYTASFIAEAIRAGILSVAKGQMEAARSSGLTYVQAMYYVVLPQ 154 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I PL ++F++++K++S+ I ++ I + T+ +Y + YL+LT Sbjct: 155 AIKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTRTFVTFDVYIFVGMFYLLLT 214 >gi|160945458|ref|ZP_02092684.1| hypothetical protein FAEPRAM212_02982 [Faecalibacterium prausnitzii M21/2] gi|158443189|gb|EDP20194.1| hypothetical protein FAEPRAM212_02982 [Faecalibacterium prausnitzii M21/2] Length = 215 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 45/135 (33%), Positives = 77/135 (57%), Gaps = 7/135 (5%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI-------VFDSFVAIIISLTLNFSAY 105 ++S + +VW+ RGTPL++Q+ VI+ G +G+ VA +++ +N++ Y Sbjct: 41 LLSGAVKTFVWVIRGTPLMLQIIVIYLGPGLLGMNNPWPSGSGGRMVAAVVAFAINYACY 100 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 SEI R I ++PKGQ +A +G+TR Q + L Q + P+ +E I+++K TS+ Sbjct: 101 FSEIYRGGIEAVPKGQTEAGQVLGMTRTQIFFKVTLLQVVKRILPPMGNEIITLVKDTSL 160 Query: 166 ASTITIPEIFQTAQR 180 A+TI EI A+ Sbjct: 161 ANTIANKEIIMMAKE 175 >gi|332715526|ref|YP_004442992.1| amino acid ABC transporter membrane spanning protein [Agrobacterium sp. H13-3] gi|325062211|gb|ADY65901.1| amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 221 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/203 (26%), Positives = 107/203 (52%), Gaps = 4/203 (1%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W N + + PQLL A VVTL IA +S VI L + + R+ + ++ I +V Sbjct: 6 FHW-NQALKALPQLLDGA-VVTLQIAILSMVIGLSCAIVLTLFRLS-GNRMLGAIAAVWV 62 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 I R TP L Q+++ +GL + GI + A++ + N + Y++E R ++ +IP Q Sbjct: 63 EIARNTPALFQIYMAHFGLGNFGIHLSPYTALLAGIAFNNAGYLAENFRGALKAIPDTQT 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP-EIFQTAQRI 181 + ++G+T QT R II+PQ + + +P +++ + + TS+ T+ + ++ Q + Sbjct: 123 RSGRSLGMTSMQTFRLIIMPQMLRVAFLPATNQMVWAILMTSLGVTVGMNTDLAGVTQAL 182 Query: 182 VSTTYQPLIIYCELAFVYLILTS 204 + +++ + A +Y ++ Sbjct: 183 NARSFRTFEFFALAAVIYYVIAK 205 >gi|17986397|ref|NP_539031.1| asparagine transport system permease protein [Brucella melitensis bv. 1 str. 16M] gi|265991981|ref|ZP_06104538.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str. Rev.1] gi|17981989|gb|AAL51295.1| asparagine transport system permease protein [Brucella melitensis bv. 1 str. 16M] gi|263003047|gb|EEZ15340.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str. Rev.1] Length = 244 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/151 (32%), Positives = 90/151 (59%), Gaps = 4/151 (2%) Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTP+LVQ+F+ +YGLP +G+ A I+++ N S +I+EI+R + + G +A+ Sbjct: 88 RGTPILVQIFLFYYGLPALGLDLSPIQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAA 147 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G+ K +ILPQ PL +E + +K T++ S IT+ E+ +TAQ++ + + Sbjct: 148 IALGIKGKVIWTKVILPQLYIRIMPPLVNELTTTVKGTALLSVITVVEVLRTAQQVANAS 207 Query: 186 YQPL-IIYCE---LAFVYLILTSFCYIIQIK 212 ++PL + C L V L+L+ +++++ Sbjct: 208 FRPLETLLCAAIILFAVNLVLSQCGRVLEMR 238 >gi|330954815|gb|EGH55075.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 231 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 87/154 (56%), Gaps = 11/154 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIGIVFD-------SFVAIIISLTLNFSAYISEI 109 Y + RG P L+ + +I++G + +G +FD +F A +I+L + F AY +E+ Sbjct: 55 YSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFAAGVIALGICFGAYATEL 114 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +I++IPKG +A A+G++R + + ++LPQ + L + F+ ++K T++ S I Sbjct: 115 FRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNLFMILMKDTALVSVI 174 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + EI + AQ V T Q Y AF+YL LT Sbjct: 175 GLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLT 208 >gi|283832261|ref|ZP_06352002.1| histidine transport system permease protein HisQ [Citrobacter youngae ATCC 29220] gi|291071903|gb|EFE10012.1| histidine transport system permease protein HisQ [Citrobacter youngae ATCC 29220] Length = 228 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V++++IG A ++ S + LI Y + RG P L Sbjct: 4 GFSGVILQGAIVTLELALSSVVLAVLIGLVGAAAKLSQSRAL-GLIFEAYTTLIRGVPDL 62 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +GI D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNAVTDAMGISQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G T Q R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T++P +YL+ T+ + + +E + D Sbjct: 183 AGKSTWEPFYFAVVCGVIYLVFTTVSNGVLLYLERRYSVGVKRAD 227 >gi|238762251|ref|ZP_04623223.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638] gi|238699598|gb|EEP92343.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638] Length = 222 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 2/169 (1%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ I +S ++L++ F A++R+ + +I + RGT LVQLF +F+ LP Sbjct: 19 VTVQITFLSATLALVLSFVFALLRLS-PLRPVRVITAASIEFLRGTSALVQLFYLFFILP 77 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 GI +I L LNFS++ +EI+R +I+++ +GQ DA A+ R IILP Sbjct: 78 LFGISISPMTTAVIGLGLNFSSFGAEIVRGAIVNVSQGQRDALRALDFPPLMAFRRIILP 137 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVSTTYQPLI 190 Q + PL + + +LKSTSV S IT+ ++ F A I + Q LI Sbjct: 138 QALPFMLPPLGNLLVELLKSTSVVSLITLSDLTFAGASLITTLGDQTLI 186 >gi|238753990|ref|ZP_04615349.1| Binding-protein-dependent transport system inner membrane component [Yersinia ruckeri ATCC 29473] gi|238707742|gb|EEQ00101.1| Binding-protein-dependent transport system inner membrane component [Yersinia ruckeri ATCC 29473] Length = 245 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 109/201 (54%), Gaps = 25/201 (12%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR-IFFSDTIISLIMHFYVWIFR 66 L++ + L+ ++TL I+ + V + ++GFF+A R S I Y +FR Sbjct: 10 LLVSPYLGWLWDGFLLTLWISVCTVVAATLLGFFLAAARESHLKSWQWSAIA--YSTLFR 67 Query: 67 GTPLLVQLFVIFYG--------------------LPHIGIVFDSF--VAIIISLTLNFSA 104 TPLL+QLF ++ LP + + SF +A I LTL +A Sbjct: 68 NTPLLIQLFFWYFAAGQILPSGWMEWLNTPHELSLPGFTLYWPSFEFLAGFIGLTLYSTA 127 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 +I+E +R+ I + KGQ A++A+GLT Q++R+++LPQ + + PL ++++I+K++S Sbjct: 128 FIAEELRAGISGVAKGQKYAAHALGLTGWQSMRYVVLPQALKIAMPPLLGQYMNIIKNSS 187 Query: 165 VASTITIPEIFQTAQRIVSTT 185 +A I + E+ ++++ + T Sbjct: 188 LAMAIGVAELSYASRQVETET 208 >gi|261884771|ref|ZP_06008810.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 186 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 48/154 (31%), Positives = 96/154 (62%), Gaps = 7/154 (4%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH---FYVWIFRGTPLL 71 Q+ + + TL ++ ++ +++ +IG VI + I+++ + YV +F+ TPL+ Sbjct: 20 QMFASGLGFTLGVSILALILAGVIG----VISGMMATGKIAILRYCSRIYVEVFQNTPLV 75 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +QLF +++ LP +GI D F ++ + AY+SE++RS I SIPKGQ++A+ + G + Sbjct: 76 IQLFFLYFALPPMGINLDVFTIGVLGIGAYHGAYMSEVVRSGINSIPKGQFEAATSQGFS 135 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 + + +IILPQ+I P +++ ++++K++SV Sbjct: 136 YIEQMMYIILPQSIKIILPPATNQTVNLIKNSSV 169 >gi|227514871|ref|ZP_03944920.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum ATCC 14931] gi|227086718|gb|EEI22030.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum ATCC 14931] Length = 237 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 115/220 (52%), Gaps = 9/220 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L DS P +L + + ++L + + F ++ ++G I ++R S +S FY+ R Sbjct: 25 KLAFDSLPTIL-SGLPMSLFLLVVCFALANVLGILIMLMRTS-SHRFLSWPARFYISFLR 82 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G P+LV LF+ ++G + A I+S T+ +A+I+E RS+ + + +GQ++A+ Sbjct: 83 GIPMLVILFITYFGFN-----MAALPAAILSFTIAPAAFIAEYYRSAFLGVDEGQFEAAR 137 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL I ++ILPQ + L + + + K TS+A+ IT+ E+F A+ + Sbjct: 138 SLGLPYHNIILNVILPQAFRIALPSLGNVMLDLFKGTSLAAMITVSEMFMEAKVVAGAAQ 197 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 + IY +A +Y ++ Q +E + T+S +K Sbjct: 198 DYMSIYIVVAVIYWLVCCLLSFGQSFLEGHLA--TWSKEK 235 >gi|209516020|ref|ZP_03264880.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209503480|gb|EEA03476.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 237 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 15/210 (7%) Query: 5 WFN-LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W N L D + + + +TL + +S + + +AV R+ + L+ Y + Sbjct: 9 WRNYLFSDGYR---FTGVAITLWLLVVSIGLGFCLSVPLAVARVSKKKWLAGLVW-LYTY 64 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVF----------DSFVAIIISLTLNFSAYISEIIRSS 113 IFRGTPL VQL + + GL + I+ D +++ TLN AY +EI + Sbjct: 65 IFRGTPLYVQLLLCYTGLYSLEIIRNNELTNAFFRDGMHCTLLAFTLNTCAYTTEIFAGA 124 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I + P G+ +A+ A G++ R +ILP + + S+E I +L +T+VA T T+P+ Sbjct: 125 IKATPYGEIEAARAYGMSSFTLYRRVILPSALRRALPYYSNEVILMLHATTVAFTATVPD 184 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I + A+ + S TYQ + A +YL ++ Sbjct: 185 ILKIARDVNSATYQSFNAFGIAALLYLCIS 214 >gi|126731794|ref|ZP_01747598.1| probable amino acid ABC transporter, permease protein [Sagittula stellata E-37] gi|126707621|gb|EBA06683.1| probable amino acid ABC transporter, permease protein [Sagittula stellata E-37] Length = 238 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 75/225 (33%), Positives = 130/225 (57%), Gaps = 14/225 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 + ++++ P+ L A + T+ +A IS + ++ IA+ R+ + ++ + Y++ FR Sbjct: 3 DFVVENLPRFLGGAWL-TIQLAAISCGLGFLLAVPIALARLS-RNEVLRGVATSYIFFFR 60 Query: 67 GTPLLVQLFVIFYG-------LPHIGI---VFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 GTPLL QLF+I+YG L +G+ D + I+SLTLN +AY SEI+R +I + Sbjct: 61 GTPLLAQLFLIYYGSGQFRPALDAVGLWTFFRDPWFCAILSLTLNSAAYASEILRGAIQA 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKG+ +A+ A+GLTR +R I+LP+ + S+E + +++TS+ S IT+ EI Sbjct: 121 IPKGEIEAAEALGLTRLLRLRLIVLPRALRIGWPAYSNEVVYQIQATSLVSIITVLEITG 180 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQH 220 A+ + S + + A +YLIL F Y+ + +IE + +H Sbjct: 181 VARTVGSRDFTFFEAFGLAAVLYLILVYGFLYVSR-RIEMRLNRH 224 >gi|256830363|ref|YP_003159091.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] gi|256579539|gb|ACU90675.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] Length = 249 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 29/224 (12%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-- 81 TL + C S VI+L +G + + R S + L+ YV + R P LV +F+ ++ L Sbjct: 23 TLRLTCWSAVIALFLGVWAGLARTSPS-LYLRLVGSTYVELCRNLPPLVLIFLCYFFLAD 81 Query: 82 ---PHIGIV-----------------------FDSFVAIIISLTLNFSAYISEIIRSSII 115 P IG+ D+FV +L L AY++EI+R I Sbjct: 82 QIAPTIGLQDALRTAPDTVKAVAGVLIGRLDQVDAFVTAAFTLGLYEGAYVAEIVRGGIR 141 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ GQW+A A G R + II+PQ + PL+ + IS +K +++ S I+I E+ Sbjct: 142 SVDAGQWEAGRAQGFPRFGLMVFIIMPQAVRNMIPPLAGQIISTIKDSAIVSVISIQELT 201 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 ++++TTY + ++ +A +Y +LT C + ++E + + Sbjct: 202 FQGMQLMATTYLTMEVWTCVALLYFVLTFSCSMGAARLEHRLRR 245 >gi|184155645|ref|YP_001843985.1| amino acid ABC transporter permease component [Lactobacillus fermentum IFO 3956] gi|183226989|dbj|BAG27505.1| amino acid ABC transporter permease component [Lactobacillus fermentum IFO 3956] Length = 229 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 115/220 (52%), Gaps = 9/220 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L DS P +L + + ++L + + F ++ ++G I ++R S +S FY+ R Sbjct: 17 KLAFDSLPTIL-SGLPMSLFLLVVCFALANVLGILIMLMRTS-SHRFLSWPARFYISFLR 74 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 G P+LV LF+ ++G + A I+S T+ +A+I+E RS+ + + +GQ++A+ Sbjct: 75 GIPMLVILFITYFGFN-----MAALPAAILSFTIAPAAFIAEYYRSAFLGVDEGQFEAAR 129 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL I ++ILPQ + L + + + K TS+A+ IT+ E+F A+ + Sbjct: 130 SLGLPYHNIILNVILPQAFRIALPSLGNVMLDLFKGTSLAAMITVSEMFMEAKVVAGAAQ 189 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 + IY +A +Y ++ Q +E + T+S +K Sbjct: 190 DYMSIYIVVAVIYWLVCCLLSFGQSFLEGHLA--TWSKEK 227 >gi|209516320|ref|ZP_03265177.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209503256|gb|EEA03255.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 254 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 1/203 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M YE+ + +L VTL + +S + ++G A I L+ Sbjct: 1 MTYEFDFSGFGLYAGMLAHGAAVTLGLTAVSTLAGGLVGIGGASIAAGGPKWARWLVAS- 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TP LVQLF +F+GLP +GI D A I+++T+N AY +EI+RS I SI +G Sbjct: 60 YVELIRNTPFLVQLFFVFFGLPSLGIHIDEIQAAILAMTVNLGAYATEIVRSGIDSISRG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q A+ A+GL +Q R+++LPQ + L + + ++ ++V S I++P++ A Sbjct: 120 QVQAAQALGLHGRQVFRYVVLPQALANVFPALLGQVLIVMLGSAVVSQISVPDLTYAANF 179 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I S ++ Y + YL+++ Sbjct: 180 IQSRNFRSFESYVIITATYLLMS 202 >gi|116248748|ref|YP_764589.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115253398|emb|CAK11786.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 229 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/158 (32%), Positives = 88/158 (55%), Gaps = 3/158 (1%) Query: 33 VISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 VIS++IG I ++ F + + YV + R P+LV + +F+ LP +G+ D Sbjct: 38 VISILIGAAIGLVVAFALTSKNRFAVVPARIYVTVIRNLPILVLVLFVFFALPQMGLRLD 97 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 + ++ L+L AY++E+ R+ ++SIP+G +A AIGLT Q II P + Sbjct: 98 KIKSFVLVLSLYSGAYLAEVFRAGLLSIPRGLTEAGLAIGLTGMQIRSSIIAPLMLRNVL 157 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 LSS IS+ K TS+A+ I +PE+ A++I +++ Sbjct: 158 PSLSSTIISLFKDTSLAAAIAVPELTFAARKINVESFR 195 >gi|209521573|ref|ZP_03270272.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209497984|gb|EDZ98140.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 237 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 104/196 (53%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S I + +AV R+ +S + Y ++FRGTPL VQL +I+ Sbjct: 21 SGLAVTLWLLVASIAIGFVCAVPLAVARVS-KKRWLSTPVRLYTYVFRGTPLYVQLLLIY 79 Query: 79 YGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D+F I++ LN AY +EI +I S G+ +A+ A Sbjct: 80 TGVYSLAFVRSHSLLDAFFRSGFHCAILAFALNTCAYTTEIFAGAIRSTSHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++ R I++P + A+PL S+E I +L +T+VA T T+P+I + A+ S TYQ Sbjct: 140 GMSWFTMYRRIVIPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYQ 198 Query: 188 PLIIYCELAFVYLILT 203 P + A +YL+++ Sbjct: 199 PFNAFGLAALLYLVVS 214 >gi|302188038|ref|ZP_07264711.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas syringae pv. syringae 642] Length = 215 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 106/187 (56%), Gaps = 1/187 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L A+ +L + SF++ ++ + ++RI T+ ++ + V++ R P +V LF Sbjct: 10 LLKAVPWSLALTLSSFLLGALLAIPLCMMRISKHATLRAIAISLTVFM-RSIPPIVWLFF 68 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 IF+ + ++FVA ++ L L +A ++EI R ++++IP GQ +AS+ +GL + Sbjct: 69 IFFSFSEYVVQLNAFVAAMLGLGLITAANLAEIYRGALLAIPHGQREASHVLGLGFRDRA 128 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +++PQ S S+ I +LK T++ASTI +PE+ Q A ++ T++ L IY Sbjct: 129 MSVMVPQVFRYSLPACSTYAIGLLKDTAIASTIGVPEVAQVAYQLSQQTFKGLEIYALAG 188 Query: 197 FVYLILT 203 +YL+++ Sbjct: 189 CLYLLVS 195 >gi|284163419|ref|YP_003401698.1| polar amino acid ABC transporter inner membrane protein [Haloterrigena turkmenica DSM 5511] gi|284013074|gb|ADB59025.1| polar amino acid ABC transporter, inner membrane subunit [Haloterrigena turkmenica DSM 5511] Length = 277 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 29/192 (15%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 LL+ A++ L + S ++ + GF I + + + + F V + RGTP+LV +F Sbjct: 45 LLWGAVISVL-LTVTSILLGFLAGFPAGAIETYGNGYSRAFVRKFGV-LLRGTPILVIMF 102 Query: 76 VIFYGLPHIGIVFDS--------------------------FVAIIISLTLNFSAYISEI 109 + FY LP+ IV D+ FVA ++L +AY S+I Sbjct: 103 ITFYALPYE-IVHDAVEALFSALDFVLGPTPFTAAVDVPGAFVAATLALGFRSAAYQSQI 161 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R ++ SI +GQ +A+ +IG++R + IRH+I PQ + S +EF +LK TS+A I Sbjct: 162 FRGALQSIDEGQMEAARSIGMSRLEAIRHVIAPQALRRSVPGFQNEFTIVLKDTSIAFAI 221 Query: 170 TIPEIFQTAQRI 181 + E+ + ++ + Sbjct: 222 GLAELLKRSEDL 233 >gi|255326957|ref|ZP_05368033.1| glutamate transporter permease protein GluD [Rothia mucilaginosa ATCC 25296] gi|255296174|gb|EET75515.1| glutamate transporter permease protein GluD [Rothia mucilaginosa ATCC 25296] Length = 312 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 30/219 (13%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTIIS-------LIMHFYVWIF 65 + TL A +S V S+ G + R+ +F ++ LIM + W+F Sbjct: 78 GLASTLSAAAVSVVTSVAFGVVFGIARLSQYRVIRWFGTVVVEFFRAVPVLIMMIFFWLF 137 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 G + GLP + F+A++I LTL + I+E++RS + +P+GQ +A Sbjct: 138 LGK---------YSGLPPAQL---PFIAVVIGLTLYNGSVIAELLRSGVKQLPRGQGEAG 185 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS-- 183 AIGLT QT+ I+LPQ T + S+F+ ILK T++ I+ PE+ +A+RI S Sbjct: 186 LAIGLTPTQTLIRILLPQAFTAMMPSMLSQFVVILKDTALGYIISYPELLASARRIGSGD 245 Query: 184 -TTYQPLIIYCEL-AFVYLILTSFCYIIQIKIESSVTQH 220 Q LI+ L V +LT+ I ++ S + Sbjct: 246 GNVLQTLILAAALFVTVNFVLTAVATGITDRLASRTSAK 284 >gi|229590087|ref|YP_002872206.1| putative ABC-type amino-acid transporter permease [Pseudomonas fluorescens SBW25] gi|229361953|emb|CAY48853.1| putative ABC-type amino-acid transporter permease protein [Pseudomonas fluorescens SBW25] Length = 220 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 107/202 (52%), Gaps = 1/202 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+A ++ ++ ++ + +IG +A + + + + YV + RGTP+ V + Sbjct: 18 LWAGFQASVYVSALAIIFGTLIGI-VAGLVLTYGKFWMRAPFRLYVDLIRGTPVFVLVLA 76 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 FY LP +G +F A + LTL +++SEI+R ++ +IP+GQ +A AIGLT Q++ Sbjct: 77 CFYMLPALGWQISAFQAGAVGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLTFYQSL 136 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +++LPQ + + I+K++++ S I + E+ + Q++++ T+ L Y Sbjct: 137 GYVLLPQALRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAG 196 Query: 197 FVYLILTSFCYIIQIKIESSVT 218 F++ ++ + IE V Sbjct: 197 FLFFVINYAIELFGRYIEKRVA 218 >gi|167837295|ref|ZP_02464178.1| histidine transport system permease protein [Burkholderia thailandensis MSMB43] Length = 237 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S I + +AV R+ +S + FY ++FRGTPL VQL +I+ Sbjct: 21 SGLAVTLWLLVASIAIGFVCAVPLAVARVS-KKRWLSTPVRFYTYVFRGTPLYVQLLLIY 79 Query: 79 YGLPHIGIVFD----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D F I++ LN AY +EI +I +I G+ +A+ A Sbjct: 80 TGMYSLAFVRDHAFLDAFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIAHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G+ R +ILP ++ A+PL S+E I +L +T+VA T T+P+I + A+ S TY Sbjct: 140 GMGPFTMYRRVILPSSLR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYM 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL ++ Sbjct: 199 AFQSFGIAALIYLAVS 214 >gi|222081570|ref|YP_002540934.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726249|gb|ACM29338.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 230 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 101/174 (58%), Gaps = 14/174 (8%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A+ VTL +A F++S I+G A+ + L++ + + +F+G P+++ +F+ + Sbjct: 16 GAVPVTLAMALAIFILSTIVGSLFAMAEYRRVPVLRELVVAYKI-VFKGVPMVIVIFLAY 74 Query: 79 YGLP---H-----IGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 YGLP H +G+ F+ ++V +I++LTL +A+ +E+++ ++ S GQ DA+ Sbjct: 75 YGLPPALHFLSSLVGVEFNGHATPNWVTLIVALTLCVAAFQAEVVKGALNSFDTGQADAA 134 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Y++G R Q R ++LPQ I + L++ + I+K+ S+ I + +IF +Q Sbjct: 135 YSLGYKRSQLFRRVMLPQVIVAAIPDLANSIMVIMKALSLGFAIEVVDIFAQSQ 188 >gi|325956801|ref|YP_004292213.1| polar amino acid transport system permease protein [Lactobacillus acidophilus 30SC] gi|325333366|gb|ADZ07274.1| polar amino acid transport system permease protein [Lactobacillus acidophilus 30SC] Length = 219 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 77/140 (55%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 +F +++S I YV + R TPLL+QLF ++Y P +G+ + V II L AY++ Sbjct: 43 YFKVSVLSQISTAYVELARNTPLLIQLFFLYYAFPILGLKMSAEVCGIIGLIFLGGAYMA 102 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E + K Q ++ A+G+ R Q R+++ PQ + S L++ I ++K TS+ S Sbjct: 103 EGFTGGFNGVTKSQINSGKALGMNRLQLARYVVFPQGLALSVPALAANIIFLIKETSIFS 162 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I IPE+ TA ++ Y+ Sbjct: 163 VIAIPELTNTAMDLIGMYYR 182 >gi|153809738|ref|ZP_01962406.1| hypothetical protein RUMOBE_00119 [Ruminococcus obeum ATCC 29174] gi|149833916|gb|EDM88996.1| hypothetical protein RUMOBE_00119 [Ruminococcus obeum ATCC 29174] Length = 264 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 13/205 (6%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-----------IISLIMHFYV 62 P L A V++ +A + + IIGF + +++ D ++ IM YV Sbjct: 19 PSFLKGA-GVSMWLALVGTLFGCIIGFLVGIVQTIPVDKNDSTAKKVIIKVVKFIMACYV 77 Query: 63 WIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 FRGTP++ Q I++G ++ I + A I +++N AY++E +R I+SI GQ Sbjct: 78 EFFRGTPMMAQAMFIYFGSAYLFNINMSMWFAAIFIVSINTGAYMAETVRGGILSIDPGQ 137 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 + + AIG+T QT+ ++ILPQ + + + I +K T V S I E+F T + + Sbjct: 138 TEGAKAIGMTHVQTMINVILPQALRNIMPQIGNNLIINIKDTCVLSIIGTVELFYTTKGV 197 Query: 182 VSTTYQPLIIYCELAFVYLILTSFC 206 Y + +Y I+T C Sbjct: 198 AGALYTYFESFTIAMVIYFIMTFTC 222 >gi|153010123|ref|YP_001371337.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151562011|gb|ABS15508.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 510 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 122/214 (57%), Gaps = 14/214 (6%) Query: 1 MKYEW---FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI 57 M Y+W L+ D + + A V + ++ +S++++ I GF +A+ + S ++I+ Sbjct: 1 MNYDWHYALGLLAD---RDFWEASWVVIKLSLLSWLLAAIAGFGLALAKQS-SWSVINGP 56 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRS 112 Y+W FR PLLV L + Y LP + ++ ++F A +I+L ++ +AY++EI R Sbjct: 57 ARAYIWFFRSLPLLV-LLIFIYSLPQVFPVLRTLLSNAFAAGLIALVISETAYMAEIHRG 115 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +++I KGQ +A A+GL+ R I++PQ I S +S+E ++I+K TS+ S I++ Sbjct: 116 GLLAIHKGQIEAGRALGLSFLGIQRLIVVPQAIRVSLPAMSNELVTIVKLTSLVSVISLA 175 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVY-LILTSF 205 EI QR+ + + L +AF Y LI+T F Sbjct: 176 EILLVGQRLYTQNFLVLETLTVVAFFYVLIVTLF 209 >gi|126665671|ref|ZP_01736652.1| ABC-type arginine transport system, permease component [Marinobacter sp. ELB17] gi|126629605|gb|EBA00222.1| ABC-type arginine transport system, permease component [Marinobacter sp. ELB17] Length = 234 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/230 (27%), Positives = 113/230 (49%), Gaps = 26/230 (11%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMHFYVWIFRGTPLLV 72 P+LL AIV T+ +A +S +SLI+G A ++ SD + I Y RG P +V Sbjct: 9 PELLSGAIV-TMELAFLSLAVSLILGLVGASAKL--SDNRPLRAIATTYTTCIRGVPDIV 65 Query: 73 QLFVIFYGLPHIGIV-----------------FDSFVAIIISLTLNFSAYISEIIRSSII 115 + + +YG + + FD F++ ++++ L F AY++E R + + Sbjct: 66 MMMLFYYG-GQLAVNSLSDVLWEAYEIDFFFQFDPFISGVVTIGLIFGAYMTETFRGAFL 124 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++ GQ +A+ A G +R T R II PQ + + + + + +LK+T++ S I + ++ Sbjct: 125 AVDTGQIEAARAYGFSRWHTFRRIIFPQMLRHALPGIGNNWQVLLKTTALVSIIGLTDMV 184 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTS----FCYIIQIKIESSVTQHT 221 + A+ P + +AFVYL LT+ F + I+ V Q + Sbjct: 185 RVAEEAAKAERMPFHFFIPVAFVYLSLTAVSELFIKWLDIRANVGVVQRS 234 >gi|330809875|ref|YP_004354337.1| amino-acid ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377983|gb|AEA69333.1| Amino-acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 242 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 11/166 (6%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP--------HIG---IVFDSFVAIIISL 98 S ++ L Y + RG P LV + +IFY L +G I + FVA II+L Sbjct: 55 SIKLLRLPAQLYTTLIRGVPDLVLMLLIFYSLQTWLTVITVALGWEYIEINPFVAGIITL 114 Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158 + AY +E R +++++P+GQ +A+ A GL+R Q R ++ PQ + + L + ++ Sbjct: 115 GFIYGAYFTETFRGAMLAVPRGQVEAATAYGLSRAQRFRFVVFPQMMRFALPGLGNNWMV 174 Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 ILK+T++ S I + ++ + AQ +TYQ A YLI+TS Sbjct: 175 ILKATALVSIIGLADLVKAAQDAGKSTYQLFFFLVLAALTYLIITS 220 >gi|331695543|ref|YP_004331782.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Pseudonocardia dioxanivorans CB1190] gi|326950232|gb|AEA23929.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Pseudonocardia dioxanivorans CB1190] Length = 236 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 53/157 (33%), Positives = 90/157 (57%), Gaps = 1/157 (0%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIG 85 IA I ++ I+ F A + + + +I YV RGT +VQLF I++ LP +G Sbjct: 20 IATIGGIVLTIVLSFGAGLALLSPSRTVRVIARVYVEGLRGTSEVVQLFWIYFALPVLVG 79 Query: 86 IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTI 145 A I+ L LN AY +EI+R ++ S+P+ Q + + A+ L+ Q +R +ILPQ + Sbjct: 80 FQLVPIWAGILVLGLNHGAYGAEIVRGAVQSVPRAQVEGAIALSLSPAQRMRRVILPQAV 139 Query: 146 TTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 P ++ FI +LKST++ S +++ EI + AQ+++ Sbjct: 140 VEMIPPFNNLFIQLLKSTALLSFVSVNEITRQAQQVL 176 >gi|302868837|ref|YP_003837474.1| polar amino acid ABC transporter inner membrane subunit [Micromonospora aurantiaca ATCC 27029] gi|315504694|ref|YP_004083581.1| polar amino acid abc transporter, inner membrane subunit [Micromonospora sp. L5] gi|302571696|gb|ADL47898.1| polar amino acid ABC transporter, inner membrane subunit [Micromonospora aurantiaca ATCC 27029] gi|315411313|gb|ADU09430.1| polar amino acid ABC transporter, inner membrane subunit [Micromonospora sp. L5] Length = 325 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 71/249 (28%), Positives = 120/249 (48%), Gaps = 39/249 (15%) Query: 4 EWFN--LIIDSF--PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIM 58 E FN ++D P ++ + T+ + + +I + +G IAV+R+ SD I+ + Sbjct: 48 EAFNWSFMVDKMFRPPIIEGLLRGTVLMTVSAMLIGVTLGVVIAVMRL--SDNPILRGVA 105 Query: 59 HFYVWIFRGTPLLVQLFV----------IFYGLP---HIGIVFD---------------- 89 Y W FR P LV L V + +G+P IG +F Sbjct: 106 WLYTWFFRAVPRLVLLAVFGNIGILWSRVEFGVPFDTQIGQLFGIDNLQLRLFGFSSRDI 165 Query: 90 --SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 F+A ++ L L+ +AY++EI+R+ I S+ GQ +A+ A+GL+R Q +R ++LPQ + Sbjct: 166 LTGFMAGLLGLALSEAAYMAEIVRAGIQSVDPGQTEAAQALGLSRAQLLRRVVLPQAMRV 225 Query: 148 SAVPLSSEFISILKSTSVASTITIP-EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFC 206 P +E I++LK TS+ + + E+F + T+Q +Y YL LTS Sbjct: 226 IIPPTGNETIAMLKDTSLLLYVPVSVELFFQLDAVGKRTFQIFPMYVAACLWYLFLTSIL 285 Query: 207 YIIQIKIES 215 + Q +E Sbjct: 286 LVGQYYLER 294 >gi|147921223|ref|YP_684965.1| ABC-type glutamate import system, permease component [uncultured methanogenic archaeon RC-I] gi|110620361|emb|CAJ35639.1| ABC-type glutamate import system, permease component [uncultured methanogenic archaeon RC-I] Length = 440 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 109/203 (53%), Gaps = 8/203 (3%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L I S + + +V TL ++ I+ I L+IG + + R ++ + I YV RG Sbjct: 202 LFIYSLEKEVTKGLVTTLELSIIAMAIGLVIGLIMGLGRTS-TNILFRGIASIYVEGIRG 260 Query: 68 TPLLVQLFVIFYGLPHI-----GIVF--DSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 PLL+QL + +GLP + G F D F A I++L++N AY++EI ++ I +I KG Sbjct: 261 LPLLLQLLFVNFGLPFLIQDLTGGSFNIDGFTACIVALSMNSGAYMAEIFKAGIEAIHKG 320 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++G++ Q + IILPQ L +EFI+++K +S+ I++ E+ ++ Sbjct: 321 QMEAARSLGMSHYQAMTFIILPQAFKIVLPALGNEFIALIKDSSIGLVISVSEVLWWSKT 380 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + + Y VYL +T Sbjct: 381 VGAEHYNTFTPLLAAGLVYLCIT 403 >gi|330811360|ref|YP_004355822.1| ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379468|gb|AEA70818.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 248 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 99/170 (58%), Gaps = 15/170 (8%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ IA ++++I+L++G + V+R + ++S I YV +FR PLLVQLF+ ++ +P Sbjct: 32 TIAIAVVAWIIALLLGSVLGVMRTV-PNRLVSGIATCYVELFRNVPLLVQLFIWYFLVPD 90 Query: 84 I-------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + +++++++ L L +A + E +R+ I ++P+GQ A+ A+G Sbjct: 91 LLPADMQEWYKQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQALPRGQESAARAMGF 150 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 Q +++LPQ PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 151 KLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|308067740|ref|YP_003869345.1| amino acid ABC transporter permease [Paenibacillus polymyxa E681] gi|305857019|gb|ADM68807.1| Hypothetical amino-acid ABC transporter permease protein [Paenibacillus polymyxa E681] Length = 219 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 101/165 (61%), Gaps = 12/165 (7%) Query: 30 ISFVISLIIGFFIAVI---RIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG---LPH 83 I+ ++S+ +GF + ++ RI I+ +MH Y+++ RGTPLL+QL +G LP Sbjct: 26 ITLILSIPLGFIVTLLAKSRI----KPIAWLMHTYIYVIRGTPLLLQLLFFCFGLPMLPV 81 Query: 84 IG--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IG +V D A +++ LN++AY +EI R ++SI KGQ++AS +GL++ QT+ +I+ Sbjct: 82 IGEYLVMDRTTAAVLAFVLNYAAYFAEIFRGGMLSIDKGQYEASQVLGLSKSQTLIRVIV 141 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 PQ + + +++E +++K T++ + +PE+ A V+ + Sbjct: 142 PQMVRIALPAVTNEATTLVKDTALLYAVAVPELLHFANTAVNRDF 186 >gi|209517851|ref|ZP_03266685.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209501684|gb|EEA01706.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 237 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 15/206 (7%) Query: 5 WFN-LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W N L D F Y +V+TL + S V+ ++ +A+ R + IS + Y + Sbjct: 9 WQNYLFTDGFN---YTGLVITLWLLVASIVLGFVLAVPLAIARAS-RNRYISGPVWLYTY 64 Query: 64 IFRGTPLLVQLFVIFYGL-----PHIGIVFDSFV-----AIIISLTLNFSAYISEIIRSS 113 IFRGTPL VQL +I+ GL H + DSF +++ LN AY +EI S Sbjct: 65 IFRGTPLYVQLLLIYTGLYSLHFVHSHAMLDSFFRNAMNCTLLAFALNECAYATEIFAGS 124 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I G+ +A+ A G+++ + IILP + + S+E I +L +T++A T TIP+ Sbjct: 125 IRETSHGEIEAAQAYGMSKFKLYTRIILPSALRRALPSYSNEVILMLHATTLAFTATIPD 184 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVY 199 I + A+ + S TY Y A +Y Sbjct: 185 ILKVARDVNSATYATFQAYGIAAILY 210 >gi|163759019|ref|ZP_02166105.1| ABC amino acid transporter, inner membrane subunit [Hoeflea phototrophica DFL-43] gi|162283423|gb|EDQ33708.1| ABC amino acid transporter, inner membrane subunit [Hoeflea phototrophica DFL-43] Length = 225 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 93/170 (54%), Gaps = 4/170 (2%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDS 90 S ++GF +A + + + HF YV + R TPL+VQLF +GLP +G + Sbjct: 32 SGLLGFLLAAVLSSLRYFEVPGLRHFATAYVEVIRNTPLIVQLFFFAFGLPLLVGYAWPF 91 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 + +++LT+NFS Y SEI+R+ ++P GQ +A+ A+G+ + R +I PQ + Sbjct: 92 WAHALLALTINFSGYFSEILRAGYAAVPAGQVEAAMALGVKKLTLFRKVIFPQAVAAMYS 151 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 L+S+FI + +T V + I + ++ I S T++ ++ L +Y+ Sbjct: 152 SLNSQFIFLFLTTGVIAEIGVTDLTSAGLFIDSRTFRSFEVFITLTVIYI 201 >gi|29653826|ref|NP_819518.1| arginine ABC transporter permease [Coxiella burnetii RSA 493] gi|153208871|ref|ZP_01947093.1| arginine ABC transporter, permease protein [Coxiella burnetii 'MSU Goat Q177'] gi|154707334|ref|YP_001424931.1| arginine transport system permease protein [Coxiella burnetii Dugway 5J108-111] gi|161831604|ref|YP_001596413.1| arginine ABC transporter, permease protein [Coxiella burnetii RSA 331] gi|165920607|ref|ZP_02219578.1| arginine ABC transporter, permease protein [Coxiella burnetii RSA 334] gi|212218911|ref|YP_002305698.1| arginine transport system permease protein [Coxiella burnetii CbuK_Q154] gi|29541089|gb|AAO90032.1| arginine transport system permease protein [Coxiella burnetii RSA 493] gi|120575660|gb|EAX32284.1| arginine ABC transporter, permease protein [Coxiella burnetii 'MSU Goat Q177'] gi|154356620|gb|ABS78082.1| arginine transport system permease protein [Coxiella burnetii Dugway 5J108-111] gi|161763471|gb|ABX79113.1| arginine ABC transporter, permease protein [Coxiella burnetii RSA 331] gi|165916809|gb|EDR35413.1| arginine ABC transporter, permease protein [Coxiella burnetii RSA 334] gi|212013173|gb|ACJ20553.1| arginine transport system permease protein [Coxiella burnetii CbuK_Q154] Length = 221 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 114/214 (53%), Gaps = 22/214 (10%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI-------RIFFSDTIISLIMHFYV 62 ++ F L ++VTL ++ + ++I G +A++ ++ F +I+ I F Sbjct: 4 LEGFGPQLAKGVMVTLAVS----LCAVIFGMGLAILFTLTEFSQLKFLKSIVKSITAF-- 57 Query: 63 WIFRGTPLLVQLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 RG P L+ LF I++G L H + +F A +++L + F+AY ++ +R +++ Sbjct: 58 --IRGLPELLVLFAIYFGGSALLTKLFHRSVQVSAFSAGVLALGMIFAAYATQTLRGALL 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +IPKGQ +A A+GL + I+LPQ + L + ++ +LK +++ + I + ++ Sbjct: 116 AIPKGQTEAGKAMGLPGWIIFKRIVLPQAWHHALPGLGNLWLVLLKDSALVALIGLGDLM 175 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYII 209 AQ STT +P Y AF++L+LTS ++ Sbjct: 176 NKAQLAASTTREPFKFYVMAAFLFLLLTSVSQLV 209 >gi|182435042|ref|YP_001822761.1| putative glutamate ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326775558|ref|ZP_08234823.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] gi|178463558|dbj|BAG18078.1| putative glutamate ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326655891|gb|EGE40737.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] Length = 214 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 34 ISLIIGFFIAVIRIFFSDTIISLIMHFYVWI--FRGTPLLVQLFVIFYGLPHIGIVFDSF 91 ++L++GF +A R+ + S + VW+ R TPL + F + GLP G+V Sbjct: 28 LALVLGFLMASFRV---APVGSFRVLGTVWVTVLRNTPLTLLFFAVLLGLPRFGLVLPFQ 84 Query: 92 VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP 151 V +++L SA+I E++RS I ++P+GQ +A+ ++G+ QT+ ++LPQ + P Sbjct: 85 VFAVLALGCYTSAFICEVLRSGINTVPRGQGEAARSLGMNFGQTLSTVVLPQAFRSVIPP 144 Query: 152 LSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + S I++ K++++A ++ E+ T + + Y + + +A YLI+T Sbjct: 145 VGSTLIALAKNSAIAGAFSVTELLGTYKTLNELGYSIIWSFIWIAVGYLIIT 196 >gi|167841278|ref|ZP_02467962.1| ABC amino acid transporter, inner membrane subunit [Burkholderia thailandensis MSMB43] Length = 223 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 119/210 (56%), Gaps = 6/210 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + S P LL A + T+ ++ V IG + R+ + IS I YV++FRG P Sbjct: 16 MQSMP-LLGKAALTTVGVSLAGLVFGFFIGLAVCASRLS-PNRSISAIGAAYVFVFRGVP 73 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LLVQL +++Y LP +GI VA + +++L +AY++EI+R +S+P G +A+ +G Sbjct: 74 LLVQLLLVYYLLPFVGINVPPLVAAVSAVSLCSAAYVAEILRGGFLSVPYGHIEAARMLG 133 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 + T+ I +PQ + L++E + ++K++S+ S + + E+ +TAQ I ++TY+PL Sbjct: 134 MRAFATLWRIKVPQATRLTLPSLANEMVLLIKASSLISVVGVAEVTRTAQNIAASTYRPL 193 Query: 190 IIYCELAFVYLI----LTSFCYIIQIKIES 215 Y +Y + L +F ++ + ++ + Sbjct: 194 EAYLAAGLIYFVINGTLAAFAHLAEHRLHA 223 >gi|227890103|ref|ZP_04007908.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] gi|227849547|gb|EEJ59633.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] Length = 219 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 96/180 (53%), Gaps = 2/180 (1%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +I S PQ + VT+ ++ + + ++++G ++I+ +F +I I+ YV + R Sbjct: 5 IIQQSLPQFV-KGFQVTVWMSFVGIIGAMVVGICCSLIQ-YFHVPVIDKIVSAYVELARN 62 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QLF ++Y P IG+ + +I L AY++E I K Q ++ A Sbjct: 63 TPLLIQLFFLYYAFPVIGLKMSAITCGLIGLVFLGGAYMAEGFTGGFDGISKNQIESGEA 122 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 IG+++ Q R+++ PQ S +++ I ++K TS+ S I IPE+ TA ++ Y Sbjct: 123 IGMSKWQLARYVVFPQGFALSVPAIAANIIFLIKETSIFSVIAIPELTNTALDLIGLYYH 182 >gi|297584865|ref|YP_003700645.1| polar amino acid ABC transporter inner membrane subunit [Bacillus selenitireducens MLS10] gi|297143322|gb|ADI00080.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus selenitireducens MLS10] Length = 223 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/184 (34%), Positives = 106/184 (57%), Gaps = 2/184 (1%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVA 93 IIG + + R+ S I+ I Y+ RGTP+LVQ +++ + + I F++ A Sbjct: 39 GFIIGSLVGLARLSKSK-ILYAIATVYIETIRGTPILVQALFLYFAVSDVFNINFNAVTA 97 Query: 94 IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS 153 II++ +N AYI+EI+R + SI KGQ++A ++G+ QT+R+II PQ PL Sbjct: 98 GIIAIAINAGAYIAEIVRGGVESIDKGQFEAGRSMGMNGTQTMRYIIWPQAFKRMIPPLG 157 Query: 154 SEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKI 213 ++FI LK TS+ + I++ E+ ++ VS+T P + Y L+ YL++T +I +I Sbjct: 158 NQFIISLKDTSIFAIISLNEVTYLMRQYVSSTGDPFVPYIMLSMAYLVITIPSMLILRRI 217 Query: 214 ESSV 217 E + Sbjct: 218 ERRL 221 >gi|227820556|ref|YP_002824527.1| glutamine ABC transporter permease [Sinorhizobium fredii NGR234] gi|227339555|gb|ACP23774.1| glutamine ABC transporter, permease protein GlnP [Sinorhizobium fredii NGR234] Length = 219 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 84/152 (55%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 T + + Y+ FRGT + VQLF ++ LP GI A +++L LN AY +E++R Sbjct: 45 TAVRALATTYIEFFRGTSIFVQLFWAYFVLPFAGITLTPLQAGVLALGLNVGAYGAEVVR 104 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++ +I + Q +A A+ L+R Q +RHIILPQ + + I +LK T+V S I++ Sbjct: 105 GAVKAIGREQREACIALNLSRYQAMRHIILPQALPLMLPTFGNNAIELLKGTAVVSLISL 164 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ AQ + + T LI + + +Y ++ Sbjct: 165 TDMTFQAQVVRAQTGSTLIPFATILVLYFVMA 196 >gi|307747399|gb|ADN90669.1| glutamine ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni M1] Length = 233 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 20/200 (10%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ I+ P L AA +T+ ++ + SLIIG F ++ +F I+ I Y+ Sbjct: 3 FDFILVQAPAFLTAA-WLTIKLSFFGIIFSLIIGLF-CILMSYFKIKILENICKLYIEFS 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFD------------------SFVAIIISLTLNFSAYIS 107 R TPLL+QLF ++Y LP I + SF I+ L+ +Y++ Sbjct: 61 RNTPLLIQLFFLYYALPKFNIHLEQIPPLDLICLSVEETLRPSFACAIVGLSFLGGSYMA 120 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E +R+ +I K Q++A ++G ++ + ++ILPQ + S +S+ I ++K TSV S Sbjct: 121 ESLRAGFEAIRKQQFEAGLSLGFSKFGNLCYVILPQALAISMPSISANIIFLIKETSVVS 180 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I +P++ + + S TY+ Sbjct: 181 IIALPDLVNLMKSLNSLTYK 200 >gi|289642307|ref|ZP_06474455.1| polar amino acid ABC transporter, inner membrane subunit [Frankia symbiont of Datisca glomerata] gi|289507839|gb|EFD28790.1| polar amino acid ABC transporter, inner membrane subunit [Frankia symbiont of Datisca glomerata] Length = 285 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 111/213 (52%), Gaps = 15/213 (7%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW-------IFRG 67 +LL +V TL A ++ +SL++G IA RI + +Y W + RG Sbjct: 67 RLLGGGLVHTLTAAALAMSLSLLLGVLIATTRISAA--------RWYRWAVVGAVELLRG 118 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 P+++ +F LP G+ I+I LT S ISEI+R+ I+++PKGQ DA+ A Sbjct: 119 VPVVIAIFFAAQVLPVYGLKLPPLWYIVIGLTAYNSVIISEIVRAGILAVPKGQRDAASA 178 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GLT QT+R ++LPQ + L S+ + ILK TS+ + I+ E+ + A + T + Sbjct: 179 LGLTHGQTLRIVLLPQAFRSMLPALISQLVVILKDTSLGAFISYEELLRRALIAIQTLHN 238 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P+ Y + +++++ + +E+ ++ Sbjct: 239 PIQTYLVIGGIFILINYLVTRLATYLEARLSGR 271 >gi|254381563|ref|ZP_04996927.1| polar amino acid ABC transporter [Streptomyces sp. Mg1] gi|194340472|gb|EDX21438.1| polar amino acid ABC transporter [Streptomyces sp. Mg1] Length = 314 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 80/129 (62%), Gaps = 3/129 (2%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEII 110 + L YV +FRG P L+ +F++ +GLP + G +V +I+L L+++AY+ E++ Sbjct: 139 LRLAATVYVDVFRGVPTLLLVFLVGFGLPALRLQGTPSQPWVLGVIALVLSYAAYVGEVL 198 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R+ + S+ Q +A+ A+GL +QT+R+++LPQ + PL ++FI++ K T++ + + Sbjct: 199 RAGLNSVHPAQRNAARALGLGERQTLRYVVLPQAVRNVLPPLLNDFIALQKDTALVAVLG 258 Query: 171 IPEIFQTAQ 179 E + AQ Sbjct: 259 PLEALRAAQ 267 >gi|70733846|ref|YP_257486.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68348145|gb|AAY95751.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 230 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 11/154 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEI 109 Y I RG P L+ + +I+YG H G + F+A +I+L L F AY +E+ Sbjct: 55 YSTIVRGVPELLWVLLIYYGTVNMMSALGEHFGNPDLALSPFLAGVIALGLCFGAYATEV 114 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +I++IPKG +A A+GL++ + +ILPQ + L + F+ ++K T++ S I Sbjct: 115 FRGAILAIPKGHREAGTALGLSKFRIFSRLILPQMWRIALPGLGNLFMILMKDTALVSVI 174 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + EI + AQ V+ P + AF+YL LT Sbjct: 175 GLEEIMRHAQNAVTFAKHPFTFFMVAAFMYLGLT 208 >gi|33596592|ref|NP_884235.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella parapertussis 12822] gi|33601145|ref|NP_888705.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella bronchiseptica RB50] gi|33573293|emb|CAE37274.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella parapertussis] gi|33575580|emb|CAE32658.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella bronchiseptica RB50] Length = 223 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 76/122 (62%) Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLLVQ++ +FY LP G I++L L+++AY +E+ R+ I ++P+GQ +A+ Sbjct: 65 RSTPLLVQMYFLFYVLPVTGWQMSPLTTGILALGLHYAAYCAEVYRAGIEAVPRGQHEAA 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+ L+R +T ++LPQ I L + +++ K T + S IT+ E+ Q ++ I STT Sbjct: 125 TALNLSRWRTAVGVVLPQAIPPVVPALGNYLVAMFKDTPLLSAITVVELLQQSKIIGSTT 184 Query: 186 YQ 187 ++ Sbjct: 185 FR 186 >gi|323262143|gb|EGA45705.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] Length = 249 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/214 (24%), Positives = 117/214 (54%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++ +++I+ ++G ++R + +S + YV +FR PL+VQ F Sbjct: 25 LWSGFQVTVALSITAWIIAFLVGSIFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPHI-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P + G+ F + F++ +I L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVVPELLPEDLGMWFKAELDPNIQFFLSSMICLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 204 YSAHAWESFTAITLAYVLINAVIMLVMSLVERKV 237 >gi|16759616|ref|NP_455233.1| glutamate/aspartate transport system permease GltJ [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764041|ref|NP_459656.1| glutamate/aspartate transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142611|ref|NP_805953.1| glutamate/aspartate transport system permease GltJ [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56414207|ref|YP_151282.1| glutamate/aspartate transport system permease GltJ [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179262|ref|YP_215679.1| glutamate/aspartate ABC transporter [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161615118|ref|YP_001589083.1| hypothetical protein SPAB_02886 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550798|ref|ZP_02344554.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167990673|ref|ZP_02571773.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168231679|ref|ZP_02656737.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236651|ref|ZP_02661709.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240513|ref|ZP_02665445.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264403|ref|ZP_02686376.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465841|ref|ZP_02699723.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820211|ref|ZP_02832211.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194445140|ref|YP_002039907.1| glutamate/aspartate ABC transporter permease protein GltJ [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448493|ref|YP_002044699.1| glutamate/aspartate ABC transporter permease GltJ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470878|ref|ZP_03076862.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194734571|ref|YP_002113775.1| glutamate/aspartate ABC transporter permease GltJ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251810|ref|YP_002145640.1| glutamate/aspartate ABC transporter permease GltJ [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197261867|ref|ZP_03161941.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198242331|ref|YP_002214652.1| glutamate/aspartate ABC transporter permease GltJ [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389956|ref|ZP_03216567.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204930566|ref|ZP_03221496.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207856129|ref|YP_002242780.1| glutamate/aspartate transport system permease GltJ [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213425079|ref|ZP_03357829.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580533|ref|ZP_03362359.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213609636|ref|ZP_03369462.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213647481|ref|ZP_03377534.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|224582499|ref|YP_002636297.1| glutamate/aspartate transport system permease GltJ [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238911615|ref|ZP_04655452.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289805230|ref|ZP_06535859.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289823920|ref|ZP_06543520.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25296624|pir||AE0583 glutamate/aspartate transport system permease protein GltJ STY0709 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16419177|gb|AAL19615.1| glutamate/aspartate transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16501908|emb|CAD05135.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhi] gi|29138242|gb|AAO69813.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56128464|gb|AAV77970.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62126895|gb|AAX64598.1| ABC superfamily (membrane), glutamate/aspartate transporter [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364482|gb|ABX68250.1| hypothetical protein SPAB_02886 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194403803|gb|ACF64025.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406797|gb|ACF67016.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457242|gb|EDX46081.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194710073|gb|ACF89294.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631650|gb|EDX50170.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197215513|gb|ACH52910.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240122|gb|EDY22742.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290414|gb|EDY29770.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197936847|gb|ACH74180.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602401|gb|EDZ00947.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320500|gb|EDZ05703.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205324294|gb|EDZ12133.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205330904|gb|EDZ17668.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334014|gb|EDZ20778.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339997|gb|EDZ26761.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343175|gb|EDZ29939.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347134|gb|EDZ33765.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206707932|emb|CAR32221.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467026|gb|ACN44856.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261245936|emb|CBG23738.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992398|gb|ACY87283.1| glutamate/aspartate transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157264|emb|CBW16752.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911696|dbj|BAJ35670.1| glutamate/aspartate ABC transporter permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320084937|emb|CBY94726.1| Octopine transport system permease protein occM [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226243|gb|EFX51294.1| Glutamate Aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613210|gb|EFY10153.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621278|gb|EFY18135.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623698|gb|EFY20536.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628970|gb|EFY25749.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631692|gb|EFY28446.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637572|gb|EFY34274.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641912|gb|EFY38542.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646756|gb|EFY43262.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651457|gb|EFY47837.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653092|gb|EFY49426.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658812|gb|EFY55067.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664918|gb|EFY61111.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668920|gb|EFY65072.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670574|gb|EFY66707.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675315|gb|EFY71391.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682214|gb|EFY78239.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684957|gb|EFY80954.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322713728|gb|EFZ05299.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323128981|gb|ADX16411.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323193985|gb|EFZ79187.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197923|gb|EFZ83045.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202030|gb|EFZ87090.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207163|gb|EFZ92116.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210930|gb|EFZ95793.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214310|gb|EFZ99061.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219285|gb|EGA03776.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225504|gb|EGA09734.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231063|gb|EGA15179.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234105|gb|EGA18194.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238200|gb|EGA22258.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242566|gb|EGA26590.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248457|gb|EGA32391.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251328|gb|EGA35200.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323259256|gb|EGA42899.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323264845|gb|EGA48346.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272318|gb|EGA55725.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326622407|gb|EGE28752.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332987608|gb|AEF06591.1| glutamate/aspartate transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 246 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/214 (24%), Positives = 117/214 (54%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++ +++I+ ++G ++R + +S + YV +FR PL+VQ F Sbjct: 25 LWSGFQVTVALSITAWIIAFLVGSIFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPHI-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P + G+ F + F++ +I L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVVPELLPEDLGMWFKAELDPNIQFFLSSMICLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 204 YSAHAWESFTAITLAYVLINAVIMLVMSLVERKV 237 >gi|308187618|ref|YP_003931749.1| Histidine transport system permease protein [Pantoea vagans C9-1] gi|308058128|gb|ADO10300.1| Histidine transport system permease protein [Pantoea vagans C9-1] Length = 229 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 104/206 (50%), Gaps = 12/206 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + ++ +VTL +A S ++++++G A ++ S + ++I Y + RG P L Sbjct: 4 GYSDVILRGTLVTLELALTSVMLAVLLGLIGAGAKLSRSRPL-AMIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G+ D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIVLNQVTDALGMAQFDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A G T Q R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 QIEAATAFGFTGAQVFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFC 206 +T+QP +YL+ T+ Sbjct: 183 AGKSTWQPFYFAIVAGVIYLVFTTLS 208 >gi|225854141|ref|YP_002735653.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae JJA] gi|225723247|gb|ACO19100.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae JJA] Length = 225 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 91/156 (58%), Gaps = 4/156 (2%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G F + I+ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAMVLGIFFGAMSTS-KRPILRILARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 FYGLP I I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYIS 136 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R IILPQT PL+++ ++++K+TS + I+ Sbjct: 137 AMRLIILPQTFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|189425081|ref|YP_001952258.1| polar amino acid ABC transporter inner membrane protein [Geobacter lovleyi SZ] gi|189421340|gb|ACD95738.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter lovleyi SZ] Length = 748 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 17/206 (8%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L+ + T+ I+ + + ++G I +R+ S ++S Y+ I RGTP+LV L Sbjct: 537 LILDGLKTTVVISVFATLFGTLLGALICFMRMAKS-RLLSAPARLYIAILRGTPVLVLLM 595 Query: 76 VIFYGLPHIGIVFDSF-----VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 +IFY +VF S + +I+ +NF AY +EI R+ I + KGQ +A ++G Sbjct: 596 LIFY------VVFASINISPVIVAVIAFGMNFGAYTAEIFRTGIEGVEKGQTEAGISLGF 649 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--- 187 TR T HI+LPQ + EFIS++K TS+ I + ++ + + I S T+ Sbjct: 650 TRTSTFLHIVLPQMVRRILPVYKGEFISLVKMTSIVGYIAVQDLTKASDIIRSRTFDAFF 709 Query: 188 PLIIYCELAFV--YLILTSFCYIIQI 211 PL++ L F+ + ++ S Y+ +I Sbjct: 710 PLVMVAILYFLISWTLMQSLEYLERI 735 >gi|91782439|ref|YP_557645.1| ABC basic amino acid transporter, inner membrane subunit [Burkholderia xenovorans LB400] gi|296159043|ref|ZP_06841870.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|91686393|gb|ABE29593.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia xenovorans LB400] gi|295890604|gb|EFG70395.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 237 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 15/210 (7%) Query: 5 WFN-LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W N L D + + + +TL + +S + + +AV R+ + L+ Y + Sbjct: 9 WRNYLYTDGYR---FTGLAITLWLLVVSIGLGFCLSIPLAVARVSKKKWLAGLVW-LYTY 64 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVF----------DSFVAIIISLTLNFSAYISEIIRSS 113 IFRGTPL VQL + + GL + I+ D +++ TLN AY +EI + Sbjct: 65 IFRGTPLYVQLLLCYTGLYSLEIIRNHELTNAFFRDGMHCTLLAFTLNTCAYTTEIFAGA 124 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I + P G+ +A+ A G++ R +ILP + + S+E I +L +T+VA T T+P+ Sbjct: 125 IRATPYGEIEAARAYGMSSFTLYRRVILPSALRRALPYYSNEVILMLHATTVAFTATVPD 184 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I + A+ + S TYQ + A +YL ++ Sbjct: 185 ILKIARDVNSATYQSFNAFGIAAVLYLCIS 214 >gi|257067918|ref|YP_003154173.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] gi|256558736|gb|ACU84583.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] Length = 257 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 105/187 (56%), Gaps = 12/187 (6%) Query: 6 FNLIIDSFPQLLYAAIVVTLPI---ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 F ++++ PQ+L V L A ++ IS ++G + + IF I+ ++ +V Sbjct: 15 FQILLERSPQVLDGVWVTALATVLGALLALAISFVLGL-LQIAPIF----IVRILARVFV 69 Query: 63 WIFRGTPLLVQLFVIFYGLPHI----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 FRGT L+VQLF + + LP + G D + +++L LN+ AY +E++R SI S+P Sbjct: 70 EFFRGTSLVVQLFWLAFVLPQLPYPLGFQLDPLLIGVLALGLNYGAYGAEVVRGSIGSVP 129 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ++A A+ L+ + + I++PQ LS+ +I +LK +++ +IT+ ++F Sbjct: 130 KGQYEAISALSLSPARGMFRIVIPQAWALMIPSLSNLWIQLLKGSAIVGSITLYDLFFQV 189 Query: 179 QRIVSTT 185 +++ T Sbjct: 190 EQVRDRT 196 >gi|238761655|ref|ZP_04622630.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638] gi|238700169|gb|EEP92911.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638] Length = 255 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 83/149 (55%), Gaps = 24/149 (16%) Query: 61 YVWIFRGTPLLVQLFVIFYGL------PHIGIV-----------------FDSFVAIIIS 97 Y+ RGTPL VQ+ V+ + L P GI+ + +F++ I++ Sbjct: 69 YISAIRGTPLFVQIMVVHFALVPLFINPRDGILVTNGIMSSDFARMLRSDYGAFLSCIVA 128 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 +TLN AY+SEI R+ I SI +GQ +AS ++G++ +T+R +ILPQ PL + I Sbjct: 129 ITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLPPLGNNAI 188 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTY 186 +I+K +S+AS I + ++ A R VS Y Sbjct: 189 AIVKDSSLASAIGLADL-AYAARTVSGAY 216 >gi|257057820|ref|YP_003135652.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] gi|256587692|gb|ACU98825.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] Length = 269 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 96/167 (57%), Gaps = 4/167 (2%) Query: 2 KYEWFNLIIDS--FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 K +FN+ S FP++L A+V T+ + F + L+IG +A++++ S + Sbjct: 37 KDAFFNVEAASAQFPEILSTALVNTIVYTALGFGLGLVIGMVLALMKLS-SVGPYRWLAT 95 Query: 60 FYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y+ FRG P L+ + YG+P GI FD + I+L L SAYI+E +R+ I ++P Sbjct: 96 LYIEFFRGIPALLVFIALGYGVPLAFGIRFDIYSTAAIALGLVGSAYIAETLRAGIQAVP 155 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 KGQ +A+ ++G+++ +T +++PQ PL++E I + K +S+ Sbjct: 156 KGQVEAARSLGMSQARTTVTVVIPQAFRIILPPLTNELILLTKDSSL 202 >gi|238790775|ref|ZP_04634534.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia frederiksenii ATCC 33641] gi|238721133|gb|EEQ12814.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia frederiksenii ATCC 33641] Length = 246 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 115/214 (53%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ ++VI+ +G ++R + I+S I YV +FR PL+VQ F Sbjct: 25 IWSGFQVTVALSLCAWVIAFFVGSLFGILRTV-PNRILSGIGTCYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F S F++ +I L L +A + E +R+ I S+P+GQ Sbjct: 84 WYLVVPELLPVDIGMWFKSELDPNIQFFLSSMICLGLFTAARVCEQVRAGIQSLPRGQKA 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 204 YSAHAYESFTAITIGYVLINAVIMLLMRLVEKKV 237 >gi|110347171|ref|YP_665989.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110283282|gb|ABG61342.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein [Chelativorans sp. BNC1] Length = 230 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 58/219 (26%), Positives = 116/219 (52%), Gaps = 10/219 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I S P L + + TL + ++ + +++G +A++R+ S +S + YV + Sbjct: 7 FDVIARSLPYLFWDGMRFTLLLTALATIGGIVLGTLLALMRLS-SIKALSTLAGGYVNLM 65 Query: 66 RGTPLLVQLFVIFYGLPHIG---------IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 R PL++ +F ++ +P+IG I +F + +I+ TL +AY SEI+R+ I S Sbjct: 66 RSLPLVLVIFWFYFLVPYIGAWLIGASQPIAVGAFASALITFTLFEAAYFSEIMRAGIQS 125 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQ A YAIGL Q + +I+LPQ + ++ I + + TS+ I++ + Sbjct: 126 IPRGQTGAGYAIGLNYSQVMGYIVLPQAFRNMLPVMLTQTIILFQDTSLVYVISLTDFLG 185 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 A ++ + + +Y A +Y +++ + ++E+ Sbjct: 186 AASKVAQRDGRLVEMYLFAAIIYFVISFAASFLVKRLEA 224 >gi|116617559|ref|YP_817930.1| ABC-type amino acid transport system, permease and periplasmic component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096406|gb|ABJ61557.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 481 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 53/171 (30%), Positives = 93/171 (54%), Gaps = 2/171 (1%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +T+ + ++ +++ I G + V+ + + + L ++IFRG PL+V F I+ GLP Sbjct: 286 LTIELTVLAIILASIWGVILGVMGVSQNSAVRGLSTTL-IYIFRGLPLMVLAFFIYIGLP 344 Query: 83 H-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 IG +F A +I+L LN AY +R ++ KGQ +A+ ++G T +++R +I+ Sbjct: 345 GVIGTKIPAFTAGLITLILNEGAYTGAFVRGGFEAVDKGQMEAARSLGFTYNRSMRKVIM 404 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 PQ + ++FI LK TS+ S I I E+ QT IV+ Q ++ Sbjct: 405 PQGLKIMVPSFINQFIITLKDTSILSAIGILELTQTGTLIVARNSQGFRVW 455 >gi|296269105|ref|YP_003651737.1| polar amino acid ABC transporter inner membrane subunit [Thermobispora bispora DSM 43833] gi|296091892|gb|ADG87844.1| polar amino acid ABC transporter, inner membrane subunit [Thermobispora bispora DSM 43833] Length = 288 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 74/126 (58%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FR P+L+ +F YG +G+V F A++ LT+ + ++EI+R+ I ++P+G+ +A Sbjct: 112 FRAVPVLMMIFFAQYGGSLLGLVVSEFAAVVFGLTVYNGSVLAEIVRAGIRAVPRGESEA 171 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 YA+GL + Q +R I+LPQ IT+ + S+ + +LK T++ + ++ R+V Sbjct: 172 GYAMGLRKNQVMRLILLPQAITSMMPAIVSQLVVLLKDTALGFIVAYADLLNAGARVVPA 231 Query: 185 TYQPLI 190 Y LI Sbjct: 232 NYFNLI 237 >gi|34498541|ref|NP_902756.1| histidine transport system permease [Chromobacterium violaceum ATCC 12472] gi|34104397|gb|AAQ60755.1| histidine transport system permease protein [Chromobacterium violaceum ATCC 12472] Length = 228 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/223 (26%), Positives = 111/223 (49%), Gaps = 21/223 (9%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P +L V+TL +A + V+S+ +G A+ + S + +L+ FY + RG P LV Sbjct: 7 PSILEGG-VLTLKLAGTALVVSVALGLVGALFKSSHSRPL-TLLAEFYSTVVRGVPDLVW 64 Query: 74 LFVIFYGL---------------PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 +F++F+G P I D F A + +L F AY++E R +++++ Sbjct: 65 MFLLFFGAQMALNDLCGYFGWQSPDI----DPFAAGVATLGFIFGAYMTETFRGAMMAVH 120 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A A G+T + I LPQ + + S+ ++ ++KST++ S I + ++ A Sbjct: 121 KGQMEAGLAYGMTPLRVFFRIQLPQMVRYALPSFSNNWLVLVKSTALVSVIGLNDVMYRA 180 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 S T QP +Y + ++L++T ++ +E + T Sbjct: 181 DAAKSATQQPFDVYIVVGALFLVVTGVSNLLLHWLEKRYSMGT 223 >gi|33592600|ref|NP_880244.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella pertussis Tohama I] gi|33572246|emb|CAE41798.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella pertussis Tohama I] gi|332382017|gb|AEE66864.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella pertussis CS] Length = 223 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 76/122 (62%) Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLLVQ++ +FY LP G I++L L+++AY +E+ R+ I ++P+GQ +A+ Sbjct: 65 RSTPLLVQMYFLFYVLPVTGWQMSPLTTGILALGLHYAAYCAEVYRAGIEAVPRGQHEAA 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+ L+R +T ++LPQ I L + +++ K T + S IT+ E+ Q ++ I STT Sbjct: 125 TALNLSRWRTAVGVVLPQAIPPVVPALGNYLVAMFKDTPLLSAITVVELLQQSKIIGSTT 184 Query: 186 YQ 187 ++ Sbjct: 185 FR 186 >gi|261823781|ref|YP_003261887.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261607794|gb|ACX90280.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 247 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 105/194 (54%), Gaps = 29/194 (14%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQ 73 L+ ++TL ++ + V+S + GF +A R D+ I ++ Y +FR TPLLVQ Sbjct: 21 LWHGFLITLGLSLGTVVLSTVSGFLLAAAR----DSQIHVLRGVVVAYSSLFRNTPLLVQ 76 Query: 74 LFVIFYGL--------------PH----IGIVFD----SFVAIIISLTLNFSAYISEIIR 111 LF ++G PH +G+ F+A + LTL SA+I+E IR Sbjct: 77 LFFWYFGAGQLFPSEMMQWLNAPHAISLLGMTLAWPSFEFLAGLAGLTLYSSAFIAEEIR 136 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S I + GQ A+ A+GLT Q++R+++LPQ + + PL ++++I+K++S+ I + Sbjct: 137 SGIRGVAHGQKYAAQALGLTGWQSMRYVVLPQALKIALPPLLGQYMNIVKNSSLTMAIGV 196 Query: 172 PEIFQTAQRIVSTT 185 E+ ++++ + T Sbjct: 197 AELSYASRQVETET 210 >gi|241113598|ref|YP_002973433.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861806|gb|ACS59472.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 223 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 108/198 (54%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F +++ +P+++ I++TL + I V+ + +G F A R + ++ YV + Sbjct: 7 FGWLLEYYPEII-KGILITLELIAIGGVLGISLGIFCAWARAL-GPAWLKPVVATYVELI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP L+QLF IF+GLP +G A +++ +N AY EIIR+ I + PKGQ++A Sbjct: 65 RNTPFLIQLFFIFFGLPSLGFKLSELTAANLAMVVNLGAYSCEIIRAGIQATPKGQFEAG 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++ +TR +T RH++L ++ LSS+ + ++ +SV S I ++ A I S T Sbjct: 125 ESLAMTRFETFRHVVLVPSLQRIWPALSSQVVIVMLGSSVVSQIAAEDLTFAANFIQSRT 184 Query: 186 YQPLIIYCELAFVYLILT 203 ++ Y +YL+L Sbjct: 185 FRAFEAYIVSTAIYLVLA 202 >gi|123441811|ref|YP_001005795.1| arginine transporter permease subunit ArtM [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332162246|ref|YP_004298823.1| arginine transporter permease subunit ArtM [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|122088772|emb|CAL11578.1| arginine transport system permease protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318606309|emb|CBY27807.1| arginine ABC transporter, permease protein ArtM [Yersinia enterocolitica subsp. palearctica Y11] gi|325666476|gb|ADZ43120.1| arginine transporter permease subunit ArtM [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860381|emb|CBX70691.1| arginine transport system permease protein artM [Yersinia enterocolitica W22703] Length = 222 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 93/159 (58%), Gaps = 12/159 (7%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYG---LPHI-------GIVFDSFVAIIISLTLNFSAYI 106 ++ Y+ +F GTPLLVQ+F+I+YG P I ++ ++ +I+L LN +AY Sbjct: 47 LVKIYITLFTGTPLLVQIFLIYYGPGQFPAIREYPWLWNLLSQPWLCAMIALALNSAAYT 106 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +++ ++ +IP GQW + A+G+++ Q++R I+LP + S+E + + KSTS+A Sbjct: 107 TQLFYGAVRAIPAGQWQSCEALGMSKAQSLR-ILLPFAFKRALSSYSNEVVLVFKSTSLA 165 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSF 205 TIT+ E+ +Q + TY ++++ VYL++ Sbjct: 166 YTITLMEVMGYSQLMYGRTYD-VMVFGAAGLVYLVVNGL 203 >gi|317054117|ref|YP_004118142.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316952112|gb|ADU71586.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 230 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 17/210 (8%) Query: 6 FNLIIDSFPQLLYAA---IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 +++I D+F L+ +++T+ I+FVIS+++ A+ R + LI Y Sbjct: 3 WDIIADNFAMYLHGTALTLLLTVVSLAIAFVISVLL----ALARDSAPRPLRGLIF-LYT 57 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSS 113 FRGTPLL+QLF+I+YGL ++ SF + ++++ LN +AY +EI Sbjct: 58 TTFRGTPLLIQLFLIYYGLAQFDLLRASFLWPWLSSPLICVLLAFILNTAAYTTEIFAGG 117 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + +P G+ +A+ A G++ R I+ P ++ S +E I +L +TS+AST+T+ E Sbjct: 118 LRHLPAGEIEAARAFGMSYPTLARRILFPAMLSRSLSLYGNETIMMLHATSLASTVTLME 177 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + A+ I Y Y +YL+LT Sbjct: 178 VTGVARNISLNYYIQFEPYVTAGAIYLVLT 207 >gi|257483718|ref|ZP_05637759.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289627332|ref|ZP_06460286.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650581|ref|ZP_06481924.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 2250] gi|330870382|gb|EGH05091.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330987163|gb|EGH85266.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] gi|331012129|gb|EGH92185.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 231 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 87/154 (56%), Gaps = 11/154 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIGIVFD-------SFVAIIISLTLNFSAYISEI 109 Y + RG P L+ + +I++G + +G +FD +F A +I+L + F AY +E+ Sbjct: 55 YSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFSAGVIALGICFGAYATEV 114 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +I++IPKG +A A+G++R + + ++LPQ + L + F+ ++K T++ S I Sbjct: 115 FRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNLFMILMKDTALVSVI 174 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + EI + AQ V T Q Y AF+YL LT Sbjct: 175 GLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLT 208 >gi|163742410|ref|ZP_02149797.1| polar amino acid uptake family ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] gi|161384360|gb|EDQ08742.1| polar amino acid uptake family ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] Length = 258 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 25/176 (14%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI----------------IISLTLNFSAYIS 107 + RGTPLL+Q+++++YGL G +F F I +++LTL+++ Y Sbjct: 88 VIRGTPLLLQIWLLYYGL---GSLFPQFPWIRSSELWPYLRQAWPYAVLALTLSYAGYEG 144 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E++R + + KGQ +A+ A G+ R R I LPQ + L E I LK+T + + Sbjct: 145 EVMRGAFSGVAKGQLEAAKAYGMPRLTMFRRIWLPQAVRNVLPTLGGETILQLKATPLVA 204 Query: 168 TITIPEIFQTAQRIVSTT---YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TIT+ +I+ + R+ S T Y+PL++ LA VY+ + + + E V Q Sbjct: 205 TITVLDIYAVSSRVRSDTFIVYEPLLL---LALVYMAIAGVITLAFKRFEDRVPQR 257 >gi|317491136|ref|ZP_07949572.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920683|gb|EFV42006.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 246 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 102/180 (56%), Gaps = 14/180 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ +G ++R + +S I YV +FR PL+VQ F Sbjct: 25 IWSGFQVTVALSICAWIIAFFVGSIFGILRTV-PNRFLSTIGMCYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPHI-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P + G+ F S FV+ ++ L L +A + E +RS I S+P+GQ + Sbjct: 84 WYLVIPELLPADLGMWFKSELDPNVQFFVSSMLCLGLFTAARVCEQVRSGIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 >gi|330718493|ref|ZP_08313093.1| ABC-type amino acid transport system, permease component [Leuconostoc fallax KCTC 3537] Length = 211 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/180 (33%), Positives = 98/180 (54%), Gaps = 2/180 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + I+ V S+I+G A++ I + +S+ H YV IFR PLLV + + FY + Sbjct: 19 TLLASLIALVGSMILGTLFAILEIL-PNKALSIFGHTYVEIFRNIPLLV-ITMFFYIVIS 76 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 I F + + LTL SA+I+E +R+ I SI GQ + + A GL+ Q + IILPQ Sbjct: 77 NAIKISGFWSGTLGLTLYTSAFIAETVRAGIQSIDSGQMEGARANGLSYGQAMSRIILPQ 136 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + L+++FI+++K++S+ + + +I A I + P Y +YLI+T Sbjct: 137 AFVVALPSLANQFINLVKNSSILAFVAGFDIMYQANVIAGLNFDPFNTYIVAGILYLIIT 196 >gi|49475424|ref|YP_033465.1| ABC transporter, permease protein [Bartonella henselae str. Houston-1] gi|49238230|emb|CAF27440.1| ABC transporter, permease protein [Bartonella henselae str. Houston-1] Length = 239 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/154 (29%), Positives = 91/154 (59%), Gaps = 12/154 (7%) Query: 64 IFRGTPLLVQLFVIFYGLP----------HIGIVF--DSFVAIIISLTLNFSAYISEIIR 111 +FR P L+ LF+++YGL +I I+F ++F+A +++L++ +A+ E+ Sbjct: 65 VFRSLPELLTLFLVYYGLQSVIQAVLDYFNIEIIFSINAFIAGVLALSMVLAAFSCEVWL 124 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + KGQ++A+ A+GL+R T ++ PQ I + LS+ ++++LK TS+ STI++ Sbjct: 125 GAFNIFDKGQYEAAKALGLSRSTTFFRVVFPQLIRNALPGLSNNWLTLLKDTSLVSTISL 184 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSF 205 ++ Q V+ T +P++ Y +YL+ ++F Sbjct: 185 VDLMQQTNLAVAATNEPMLFYLVACLLYLLFSAF 218 >gi|322390821|ref|ZP_08064331.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 903] gi|321142491|gb|EFX37959.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 903] Length = 230 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 106/198 (53%), Gaps = 11/198 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 SF L A+ TL + ++ V+ G + ++ D + + + YV+ R TP + Sbjct: 11 SFLPTLVQALPATLALMVLTTVLGSAFGLVLTWAQVS-EDKVGAGLAKGYVFTLRCTPPI 69 Query: 72 VQLFVIFYGLPH-----IGIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 V LF++FYGLP +G+ D FV +++++ L F+A ISE+ +++ ++IPKGQ + Sbjct: 70 VLLFLVFYGLPQFLNWWLGVDIDHWSKFVFVLVAMFLLFAAMISEVFKAAYLAIPKGQME 129 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A +IGLT QTI I+LPQ + +++ +++++ ++A TI +I ++S Sbjct: 130 AGLSIGLTPAQTIWRIVLPQAFRVALPNMTTAILNLMRDAALAYTIGFIDIMGAGNNLIS 189 Query: 184 TTYQ--PLIIYCELAFVY 199 L Y +A +Y Sbjct: 190 RNLGNYSLETYTAVAVIY 207 >gi|312864860|ref|ZP_07725091.1| putative glutamine ABC transporter, permease protein GlnM [Streptococcus downei F0415] gi|311099987|gb|EFQ58200.1| putative glutamine ABC transporter, permease protein GlnM [Streptococcus downei F0415] Length = 235 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 109/206 (52%), Gaps = 9/206 (4%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP- 82 TL +A + +++L +G + + + I YV +F+ TPLLV +FYGL Sbjct: 34 TLGMAVCALIVALALGLIFGAMSSS-RNKLAKAIARVYVEVFQNTPLLVHFVFVFYGLSI 92 Query: 83 --HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 + I +F ++ + + AY+SE+IRS I SIP+GQ +A+ + G T ++T+ II Sbjct: 93 LTNGAIKVPAFWTSVLCVGVYTGAYMSEVIRSGIESIPRGQTEAALSQGFTYRETMSIII 152 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LPQ + P+ ++ ++++K+TS + I+ +I TA+ T + + AF+Y Sbjct: 153 LPQAVRIIIPPMINQVVNLIKNTSTVAIISGADIMFTAKAWAYDTTNYVPAFAGAAFLYF 212 Query: 201 ILTSFCYIIQ--IKIESSVTQHTYSV 224 I+ C+ + + + + TYS+ Sbjct: 213 IM---CFPVASWGRRKEEANKKTYSL 235 >gi|330819467|ref|YP_004348329.1| ABC transporter, permease protein [Burkholderia gladioli BSR3] gi|327371462|gb|AEA62817.1| ABC transporter, permease protein [Burkholderia gladioli BSR3] Length = 216 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 113/207 (54%), Gaps = 6/207 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWIFRG 67 + P L +AA +TL ++ V+ IG + R + + + + YV FRG Sbjct: 8 LAGLPLLTHAA-SMTLAVSAAGLVLGFFIGLAVCCARRAPWAAPRVAGTL---YVRFFRG 63 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PLLVQL ++FY LP +GI VA + +++L +AY++EI+R ++P GQ +A+ Sbjct: 64 VPLLVQLLLVFYLLPFVGINVSPVVAAVSAVSLCSAAYVAEILRGGFENLPPGQIEAARM 123 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL+ + I +PQ + + L++E + ++K++S+ S + + EI +TAQ + ++TYQ Sbjct: 124 LGLSAADRLWRIQVPQVMRLTLPSLANEMVLLIKASSLISVVGVAEITRTAQNLAASTYQ 183 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIE 214 PL Y +Y IL ++ E Sbjct: 184 PLEAYAAAGLIYFILCGALALVAHGAE 210 >gi|238762871|ref|ZP_04623839.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia kristensenii ATCC 33638] gi|238698882|gb|EEP91631.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia kristensenii ATCC 33638] Length = 246 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 116/214 (54%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ ++VI+ +G ++R + I+S I YV +FR PL+VQ F Sbjct: 25 IWSGFQVTVALSLCAWVIAFFVGSLFGILRTV-PNRILSTIGATYVELFRNVPLIVQFFT 83 Query: 77 IFYGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P ++G+ F S F++ ++ L L +A + E +R+ I S+P+GQ Sbjct: 84 WYLVVPELLPANLGMWFKSELDPNIQFFLSSMMCLGLFTAARVCEQVRAGIQSLPRGQKA 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 204 YSAHAYESFTAITLGYVLINAVIMLLMRLVEKKV 237 >gi|238791650|ref|ZP_04635288.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia intermedia ATCC 29909] gi|238729266|gb|EEQ20782.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia intermedia ATCC 29909] Length = 246 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 115/214 (53%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ ++VI+ +G ++R + I+S I YV +FR PL+VQ F Sbjct: 25 IWSGFQVTVALSLCAWVIAFFVGSLFGILRTV-PNRILSGIGTCYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F S F++ ++ L L +A + E +R+ I S+P+GQ Sbjct: 84 WYLVVPELLPVDIGMWFKSELDPNIQFFLSSMLCLGLFTAARVCEQVRAGIQSLPRGQKA 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 204 YSAHAYESFTAITLGYVLINAVIMLLMRLVEKKV 237 >gi|319779071|ref|YP_004129984.1| Histidine ABC transporter, permease protein HisQ [Taylorella equigenitalis MCE9] gi|317109095|gb|ADU91841.1| Histidine ABC transporter, permease protein HisQ [Taylorella equigenitalis MCE9] Length = 234 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 116/215 (53%), Gaps = 21/215 (9%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++ +D P++L A+V TL +A +S +++++IGF A+ R+ + IIS I FY Sbjct: 4 FDVFLDYLPRVLEGALV-TLEVALLSVILAVVIGFIGALFRLS-KNRIISFIGTFYSTFV 61 Query: 66 RGTPLLVQLFVIFY----GLPHIGIVFD-------SFVAIIISLTLNFSAYISEIIRSSI 114 RG P +V + +IFY GL + FD F A +++L+ + A+ +E R +I Sbjct: 62 RGVPDIVWMLMIFYSIQIGLNQVTEYFDWDYIEISPFFAGVLTLSFIYGAFFTETFRGAI 121 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++IPKG +A A G+++ Q II P + + + + ++ + K+T++ S I + ++ Sbjct: 122 LAIPKGSIEAGEAYGMSKMQVSSRIIFPLMMRFAIPGMKNNWLVLNKATALVSLIGLEDM 181 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYII 209 A S T+ L+F + +L++ ++I Sbjct: 182 TLIAHNAGSATH--------LSFAFNLLSALIFLI 208 >gi|170735289|ref|YP_001774403.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169821327|gb|ACA95908.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 225 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 103/201 (51%), Gaps = 14/201 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI---F 65 I+ ++ + A +VTL +A + + +++G A ++ + + + H + Sbjct: 3 ILVNYGAQIAAGALVTLELALAALCVGMLLGIAGASAKL----SGVGWLTHATYALTNFL 58 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RG P + L + ++GL H+ IV F A +I+L + F AY SE+ R + I++P Sbjct: 59 RGIPEFLILLICYFGLSHLLNAQFDGAIVISPFSAGVIALAVVFGAYASEMFRGAFIAVP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +A+ A G++R QT+ H+ LPQ L++ + ++LK TS+ S + + ++ + A Sbjct: 119 AGQIEAARAYGMSRLQTLWHVRLPQAWRICLPSLNNMWQNLLKDTSLVSIVGLEDMLRKA 178 Query: 179 QRIVSTTYQPLIIYCELAFVY 199 T QP + Y + VY Sbjct: 179 NIAAQFTKQPFVFYVTVGIVY 199 >gi|46204319|ref|ZP_00209357.1| COG0765: ABC-type amino acid transport system, permease component [Magnetospirillum magnetotacticum MS-1] Length = 240 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 110/218 (50%), Gaps = 19/218 (8%) Query: 1 MKYEW-FNLIIDSFPQ-------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT 52 M Y W + ++ + P+ +L + + T+ A S+ I+ +G I V+R S Sbjct: 1 MTYHWNWGVLFEPSPEGTGTYADMLLSGLAWTVLTALGSWAIAFGLGSVIGVMRTLPSRA 60 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLP-----HIGIVFDS-----FVAIIISLTLNF 102 + + YV +FR PLLVQ+F+ ++ LP IG F ++ L Sbjct: 61 A-NAVGAAYVELFRNVPLLVQMFLWYFVLPELLPARIGAAVKQMPDAPFYTAVLCLGFFT 119 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +A ++E +R+ I S+P+GQ A A+GLT QT R ++LP PL+SEF++ LK+ Sbjct: 120 AARVAEQVRAGIRSLPRGQALAGTALGLTVAQTYRFVLLPHAYRIILPPLTSEFLNNLKN 179 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 TSVA TI + E+ A+ + ++Q + +YL Sbjct: 180 TSVALTIGLLELTARARAMQEFSFQVFEAFTAATLLYL 217 >gi|296110978|ref|YP_003621359.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii IMSNU 11154] gi|295832509|gb|ADG40390.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii IMSNU 11154] Length = 213 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 105/197 (53%), Gaps = 3/197 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 NL+ D+FP L TL + I+ V S+I+G A+++I I + YV +FR Sbjct: 2 NLLQDNFPTFL-QGFGYTLLSSLIALVGSMILGTGFAIMQIV-PQKWAQKIGNIYVQVFR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PLL+ F F + I F + ++L L SA+I+E +R+ I+S+ GQ + + Sbjct: 60 NIPLLIITFFFFLVVSKY-IKMSGFTSGTVALMLYTSAFIAETVRAGILSVDSGQMEGAR 118 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A GL+ Q ++HI+LPQ S L ++FI+++K++S+ + + ++ + + T+ Sbjct: 119 ANGLSFAQAMQHIVLPQAFRISLPSLGNQFINLVKNSSILAFVGGLDLMYQGNMVAANTF 178 Query: 187 QPLIIYCELAFVYLILT 203 Y +A YL++T Sbjct: 179 DTFSTYIIVAIFYLVIT 195 >gi|290955800|ref|YP_003486982.1| ABC transporter transmembrane protein [Streptomyces scabiei 87.22] gi|260645326|emb|CBG68412.1| putative transport system transmembrane component [Streptomyces scabiei 87.22] Length = 328 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 115/216 (53%), Gaps = 24/216 (11%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQL---- 74 +++TL + S V+ LI G +A+ R+ SD+ ++ + Y+W R PL+V L Sbjct: 80 GLLITLEVTAYSAVLGLIGGILLALARL--SDSPVLRSVSWVYIWALRSIPLIVVLLFLY 137 Query: 75 -FVIFYGLPHIGIVF--------------DSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 F Y +G+ F D VA+I L+LN +AY +E++R I+S+ + Sbjct: 138 NFSALYQTLSLGVPFGPAFFTFDESRLATDMAVAVI-GLSLNEAAYAAEVVRGGILSVDQ 196 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ A+GL + R I+ PQ + + ++ I ++KSTS+ +++ ++F TAQ Sbjct: 197 GQHEAASALGLPKGYQFRRIVFPQALRSITPNYVNQLIGLIKSTSLVFYVSLLDLFGTAQ 256 Query: 180 RIVSTTYQPLIIYCELAFV-YLILTSFCYIIQIKIE 214 + ST ++ ++ V YLILTS +IQ +E Sbjct: 257 AMGSTYPGDIVPLLLVSTVWYLILTSVVSVIQFYVE 292 >gi|271500848|ref|YP_003333873.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270344403|gb|ACZ77168.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 223 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 94/175 (53%), Gaps = 12/175 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNF 102 ++S++ Y+ +F GTPLLVQ+F+I+YG ++ ++ + +L LN Sbjct: 43 VLSVLAKGYITLFTGTPLLVQIFLIYYGPGQFESIRRIDWLWNLLSQPWLCAVSALALNS 102 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +++ ++ +IP GQW + A+G+ ++QT+R I+LP + S+E + + K Sbjct: 103 AAYTTQLFYGAVRAIPSGQWQSCAALGMNQRQTLR-ILLPFAFKRALSSYSNEVVLVFKG 161 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 TS+A TIT+ E+ Q + TY ++++ VYL + ++ IE Sbjct: 162 TSLAYTITLMEVMGYGQLLYGRTYD-VLVFGAAGIVYLCVNGLLTLLMRLIERRA 215 >gi|295836792|ref|ZP_06823725.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. SPB74] gi|197697534|gb|EDY44467.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. SPB74] Length = 246 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 112/218 (51%), Gaps = 9/218 (4%) Query: 4 EWFNLIIDSFPQL---LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++F+ D F Q+ L+ + T+ A ++FV+S GF + R + T++ + Sbjct: 3 DFFSYFFDHFDQVGSGLWLTVQATVYGALLAFVLSFAFGF---MGRSGY--TVVRGLSRV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 V FRGT L +QLF ++Y LP + G + +++ LN+ AY SE++R ++ ++P+ Sbjct: 58 IVEFFRGTSLYIQLFWLYYALPPLTGYELSALFCGVVAFGLNYGAYGSEVVRGALNAVPR 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q++A+ A+ L+ Q +R +ILPQ L+S I +LK+T + I+ ++ Q Q Sbjct: 118 AQFEAAVALNLSPFQRMRRVILPQAWVQMIPSLTSLLIMLLKATPLLWLISAADLTQVVQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + T + Y L +Y +L + +E S Sbjct: 178 AMRDRTGATVPAYLTLLVMYFVLAYLLTLAMNALERSA 215 >gi|190574065|ref|YP_001971910.1| putative transmembrane ABC transporter [Stenotrophomonas maltophilia K279a] gi|190011987|emb|CAQ45609.1| putative transmembrane ABC transport protein [Stenotrophomonas maltophilia K279a] Length = 581 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 112/211 (53%), Gaps = 26/211 (12%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF----------VIFYGLPHIGIV 87 +G +A+ R+ S ++S + YVW+FR PLLV L I G+P GI Sbjct: 90 LGTLLALARVSGS-PLLSAVSWGYVWLFRSIPLLVLLLLLNNLGYLYSTIELGVPFTGIS 148 Query: 88 FDS---------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 S F A ++ LTLN +A+ +E+IR I+S+ GQ++A+ A+GL R + +R Sbjct: 149 LFSYPTTQLIGVFTAAVLGLTLNQAAFSAEVIRGGILSVDNGQYEAAAALGLPRARQVRR 208 Query: 139 IILPQTITTSAVPLS-SEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCEL 195 IILPQ + S +P + ++ I + KSTSV + +PE+F T Q I + PL++ + Sbjct: 209 IILPQAM-RSILPAAFNDVIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVVPLLMVATV 267 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 YL++ + ++Q ++E + ++ Sbjct: 268 --WYLVILTVLSLMQRRVEQRFARGQLQRER 296 >gi|170691908|ref|ZP_02883072.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170143192|gb|EDT11356.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 237 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 15/210 (7%) Query: 5 WFN-LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W N L D + + + +TL + +S + + +AV R+ + L+ Y + Sbjct: 9 WRNYLYTDGYR---FTGLAITLWLLVVSIGLGFCLSIPLAVARVSKRKWLAGLVW-LYTY 64 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVF----------DSFVAIIISLTLNFSAYISEIIRSS 113 IFRGTPL VQL + + GL + ++ D +++ TLN AY +EI + Sbjct: 65 IFRGTPLYVQLLLCYTGLYSLEVIRNHELTNAFFRDGMHCTLLAFTLNTCAYTTEIFAGA 124 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I + P G+ +A+ A G++ R +ILP + + S+E I +L +T+VA T T+P+ Sbjct: 125 IKATPYGEIEAARAYGMSSFTLYRRVILPSALRRALPYYSNEVILMLHATTVAFTATVPD 184 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I + A+ + S TYQ + A +YL ++ Sbjct: 185 ILKIARDVNSATYQSFNAFGIAALLYLCIS 214 >gi|330892336|gb|EGH24997.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] Length = 231 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 87/154 (56%), Gaps = 11/154 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIGIVFD-------SFVAIIISLTLNFSAYISEI 109 Y + RG P L+ + +I++G + +G +FD +F A +I+L + F AY +E+ Sbjct: 55 YSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFSAGVIALGICFGAYATEV 114 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +I++IPKG +A A+G++R + + ++LPQ + L + F+ ++K T++ S I Sbjct: 115 FRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNLFMILMKDTALVSVI 174 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + EI + AQ V T Q Y AF+YL LT Sbjct: 175 GLEEIMRHAQIAVGFTKQAFTFYVVAAFMYLGLT 208 >gi|251789978|ref|YP_003004699.1| arginine transporter permease subunit ArtM [Dickeya zeae Ech1591] gi|247538599|gb|ACT07220.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 223 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 95/172 (55%), Gaps = 12/172 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNF 102 ++S++ Y+ +F GTPLLVQ+F+I+YG ++ ++ + +L LN Sbjct: 43 VLSMLAKGYITLFTGTPLLVQIFLIYYGPGQFESIRRIDWLWSLLSQPWLCAVSALALNS 102 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +++ ++ +IP GQW + A+G++++QT+R I+LP + S+E + + K Sbjct: 103 AAYTTQLFYGAVRAIPSGQWQSCAALGMSQRQTLR-ILLPFAFKRALSSYSNEVVLVFKG 161 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+A TIT+ E+ Q + TY ++++ VYL + ++ +E Sbjct: 162 TSLAYTITLMEVMGYGQLLYGRTYD-VLVFGAAGIVYLCVNGLLTLLMRLVE 212 >gi|319795336|ref|YP_004156976.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315597799|gb|ADU38865.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 241 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 119/215 (55%), Gaps = 7/215 (3%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W +I +P +V+TL +A V++L +G + + R+ + + F V++ Sbjct: 9 WVYFLIGQYPNGPLGGLVLTLLLASCGLVLALPLGIVLGLARVSPWRWLRWPVTGF-VFV 67 Query: 65 FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RG PLL+ +F ++ LP + G+ D F ++I+L + +AY++EI+R+ I +P+GQ + Sbjct: 68 VRGLPLLMVIFWAYFFLPSLTGVKTDQFTTMLIALVIFDAAYLAEIVRAGIQGLPRGQME 127 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 + A+GL+ + +R ++LPQ + + L ++F+S +K TS+ I + E+ A +I + Sbjct: 128 TARALGLSYFRAMRLVVLPQALRSMLPSLVNQFVSTIKETSLGYIIGLAEVSFIATQINT 187 Query: 184 TTY-QPLIIYCELAFVYLI----LTSFCYIIQIKI 213 + +P IY L Y I L+ F Y ++ ++ Sbjct: 188 QVFTKPAQIYLILGGTYFILCFGLSRFAYWLERRL 222 >gi|262202137|ref|YP_003273345.1| polar amino acid ABC transporter inner membrane subunit [Gordonia bronchialis DSM 43247] gi|262085484|gb|ACY21452.1| polar amino acid ABC transporter, inner membrane subunit [Gordonia bronchialis DSM 43247] Length = 296 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 96/170 (56%), Gaps = 11/170 (6%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMHFYVWIFRGTPLL 71 FP L TL A +S V++LI+G + + R+ SD + + +I F+V +FR P+L Sbjct: 67 FPGLFR-----TLAAAVVSIVLALILGAVLGIGRL--SDHLWVRMIAGFFVEVFRAIPVL 119 Query: 72 VQLFVIFYGLPHIGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 + + ++ G+V S F A++ LTL + ++EI+RS I S+PKGQ +AS A+ Sbjct: 120 ILMVFTWFLFALYGVVPASQLAFAAVVTGLTLYNGSVMAEILRSGINSLPKGQTEASKAL 179 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GL + +R I+LPQ +T L S+ + LK +++ I EI ++A Sbjct: 180 GLRKSHMMRLILLPQAVTAMMPALVSQMVVALKDSALGYIIGYSEIIRSA 229 >gi|218517085|ref|ZP_03513925.1| probable amino acid ABC transporter, permease protein [Rhizobium etli 8C-3] Length = 219 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 99/184 (53%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ ++ + +IG F+ + + + I+ LI+ Y I RGTP+LV + +Y Sbjct: 19 GIAMTVSISLLAILAGSVIGVFVG-LALVYGGMILRLIVRAYTDIIRGTPVLVLVLASYY 77 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 +G+ F A +++L + S+++ EI+R ++ +IPKGQ +A+ AIGLT QT + Sbjct: 78 VSAAVGLDLGPFSAGVLALAIFCSSHVGEIVRGALQAIPKGQTEAAKAIGLTFTQTFTSV 137 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 + PQ + + ++K++++ S I + E+ Q I+S + L Y +Y Sbjct: 138 LWPQAMRQCLPAWVNTAAEMVKASTLLSVIGVAELLLRTQEIISRNFMSLQFYFLAGGLY 197 Query: 200 LILT 203 I+ Sbjct: 198 FIVN 201 >gi|163739218|ref|ZP_02146630.1| polar amino acid uptake family ABC transporter, permease protein [Phaeobacter gallaeciensis BS107] gi|161387618|gb|EDQ11975.1| polar amino acid uptake family ABC transporter, permease protein [Phaeobacter gallaeciensis BS107] Length = 258 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 28/211 (13%) Query: 32 FVISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF 88 V++ I+GF +AV + +S + + RGTPLL+Q+++++YGL G +F Sbjct: 53 LVVTSILGFALAVPLGLAQAVGPWYLSTPARIFCTVIRGTPLLLQIWLLYYGL---GSLF 109 Query: 89 DSFVAI----------------IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 F I +++LTL+++ Y E++R + + KGQ +A+ A G+ R Sbjct: 110 PQFPWIRSSELWPYLRQAWPYAVLALTLSYAGYEGEVMRGAFSGVAKGQLEAAKAYGMPR 169 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPL 189 R I LPQ + L E I LK+T + +TIT+ +I+ + R+ S T Y+PL Sbjct: 170 LTMFRRIWLPQAVRNVLPTLGGETILQLKATPLVATITVLDIYAVSSRVRSDTFIVYEPL 229 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ LA VY+ + + + E V Q Sbjct: 230 LL---LALVYMAIAGVITLAFKRFEDRVPQR 257 >gi|300931334|ref|ZP_07146666.1| arginine/ornithine transport protein [Escherichia coli MS 187-1] gi|331653751|ref|ZP_08354752.1| histidine transport system permease protein HisQ [Escherichia coli M718] gi|300460839|gb|EFK24332.1| arginine/ornithine transport protein [Escherichia coli MS 187-1] gi|331048600|gb|EGI20676.1| histidine transport system permease protein HisQ [Escherichia coli M718] Length = 228 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ +VTL +A S V+++IIG A ++ + + LI Y + RG P L Sbjct: 4 GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLS-QNRLSGLIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----------HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G I D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G TR Q I+ P + + + + + ILKST++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTRGQVFLRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +T++P +YL+ T+ Sbjct: 183 AGKSTWEPFYFAIVCGVIYLVFTT 206 >gi|239818199|ref|YP_002947109.1| polar amino acid ABC transporter inner membrane protein [Variovorax paradoxus S110] gi|239804776|gb|ACS21843.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 222 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 112/204 (54%), Gaps = 4/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M + W F+ ++ +P LL + VT + ++F ++ IG IA + ++ Sbjct: 1 MDFTWDFSAVLQHWPVLL-KGVGVTAGLWAVAFPSAMAIGLLIA-LGARSKSRLVGAATR 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y+ +FR P+L+QL FY P + G +VA +++L+LN SAY SEI R I S+P Sbjct: 59 GYMELFRNIPILIQLVWFFYAFPILTGWQLTPYVAALLALSLNASAYCSEIFRGGIASLP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQW+ + A+G+ R Q +R ++LPQ + ++ I + K+TS+AS I + E+ Sbjct: 119 AGQWEGARALGMRRVQVLRRVVLPQVLKRMLPAFTNRGIELAKNTSIASVIAVHELMYQG 178 Query: 179 QRIVSTTYQPLIIYCELAFVYLIL 202 + + + Y+PL I +A VY +L Sbjct: 179 RALSAAYYRPLEILTAVAVVYFVL 202 >gi|254489588|ref|ZP_05102790.1| amino acid ABC transporter, permease protein [Roseobacter sp. GAI101] gi|214041758|gb|EEB82399.1| amino acid ABC transporter, permease protein [Roseobacter sp. GAI101] Length = 231 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 83/151 (54%), Gaps = 11/151 (7%) Query: 63 WIF--RGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIR 111 WIF RG+PLLVQLF+I++G+ + + +S I+++ LN AY +E++R Sbjct: 56 WIFFIRGSPLLVQLFIIYFGMGEVDAIRNSVFWPILREPLNCAILAVGLNSGAYSAELLR 115 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + IP GQ +A+ +G++ + I LPQ +E I ++K +++AS +T+ Sbjct: 116 GGLRQIPVGQLEAARVLGMSGFHALTRITLPQVYRNVLPVTGNEIILVMKGSALASAVTV 175 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 E+ A+ VS TY P ++ +YL++ Sbjct: 176 MEMTGAARAFVSKTYAPFEVFTVAGIIYLVI 206 >gi|126179312|ref|YP_001047277.1| polar amino acid ABC transporter, inner membrane subunit [Methanoculleus marisnigri JR1] gi|125862106|gb|ABN57295.1| amino acid ABC transporter membrane protein 1, PAAT family [Methanoculleus marisnigri JR1] Length = 225 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/160 (31%), Positives = 92/160 (57%), Gaps = 2/160 (1%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIGIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YVW FRG P+LV LF+ ++G+ P +G+ +FV + L L +AY S+I R +I S+ Sbjct: 57 YVWFFRGLPILVLLFLFWFGIFPGLGLGNLSAFVVGAVVLGLRGAAYQSQIFRGAIQSVG 116 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ A+ ++G++R IR +ILPQ + + S+E+ +IL ++V I + E+ Sbjct: 117 EGQMIAARSLGMSRLTAIRSVILPQAMRIALPGWSNEYPNILTDSAVCYAIGVVELLTIT 176 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 R+V+ T + +Y A +++IL + ++E+ + Sbjct: 177 SRMVTQTNITMPVYLATAGIFIILNYGGLKLLHRLEARIA 216 >gi|239635973|ref|ZP_04676990.1| L-cystine transport system permease protein TcyL [Staphylococcus warneri L37603] gi|239598438|gb|EEQ80918.1| L-cystine transport system permease protein TcyL [Staphylococcus warneri L37603] Length = 227 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 101/181 (55%), Gaps = 12/181 (6%) Query: 17 LYAAIVVTLPIACI----SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 L+ +V LPI + + +++ I+G + +IRI +S + Y R TPLL+ Sbjct: 9 LFKQVVQQLPITLVMIICALILATILGLILTMIRIK-QVPYLSTCVRVYQSFMRSTPLLL 67 Query: 73 QLFVIFYGLPHIGIVF-------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 QLF++++ LP ++F D II++ +L+ +AY+SE+ R+ +S+ Q +A Sbjct: 68 QLFLVYFALPQFLLIFQININHFDRLFFIILAFSLHSAAYLSEVFRAGYVSVDYRQIEAG 127 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++GL+ + ++ II+PQ + S L+++ I ++K TS+A TI I ++ Q I+ Sbjct: 128 LSVGLSYPRILKDIIIPQALRNSIPNLTTQIIELIKDTSLAFTIGIIDMMGQVQLIIGNN 187 Query: 186 Y 186 Y Sbjct: 188 Y 188 >gi|322832148|ref|YP_004212175.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321167349|gb|ADW73048.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 222 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 97/172 (56%), Gaps = 12/172 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYG---LPHI-------GIVFDSFVAIIISLTLNF 102 + S I+ Y+ +F GTPLLVQ+F+I+YG P I ++ ++ + +L LN Sbjct: 43 VASQIVKGYITLFTGTPLLVQIFLIYYGPGQFPSIREIPWLWEVLSQPWLCAMFALALNS 102 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +++ ++ +IP GQW + A+G+++ QT+R I+LP + S+E + + KS Sbjct: 103 AAYTTQLFTGAVRAIPSGQWQSCEALGMSKPQTLR-ILLPYAFKRALSSYSNEVVLVFKS 161 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+A TIT+ ++ +Q + TY ++++ VYL + ++ IE Sbjct: 162 TSLAYTITLMDVMGHSQLMYGRTYD-VMVFGAAGVVYLCVNGLLTLMMRLIE 212 >gi|319945662|ref|ZP_08019914.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus australis ATCC 700641] gi|319748261|gb|EFW00503.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus australis ATCC 700641] Length = 230 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/160 (32%), Positives = 90/160 (56%), Gaps = 10/160 (6%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH-----IGIVFD---SFVAIIISLTLN 101 D + + + YV+ R TP +V LF++FYGLP +GI D FV ++I++ L Sbjct: 48 EDKVGAGLAKGYVFTLRCTPPIVLLFLVFYGLPQFLNWWLGIDIDHWSKFVFVLIAMFLL 107 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 F+A ISE+ +++ ++IPKGQ +A +IGLT QTI I+LPQ + +++ +++++ Sbjct: 108 FAAMISEVFKAAYLAIPKGQMEAGLSIGLTPAQTIWRIVLPQAFRVALPNMTTAILNLMR 167 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVY 199 ++A TI +I ++S L Y +A +Y Sbjct: 168 DAALAYTIGFIDIMGAGNNLISRNLGNYSLETYTAVAVIY 207 >gi|307728985|ref|YP_003906209.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307583520|gb|ADN56918.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 237 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 15/210 (7%) Query: 5 WFN-LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W N L D + + + +TL + +S + + +AV R+ + L+ Y + Sbjct: 9 WRNYLYTDGYR---FTGLAITLWLLVVSIGLGFCLSIPLAVARVSKKKWLAGLVW-LYTY 64 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFD----------SFVAIIISLTLNFSAYISEIIRSS 113 IFRGTPL VQL + + GL + IV + +++ TLN AY +EI + Sbjct: 65 IFRGTPLYVQLLLCYTGLYSLEIVRNHELTNAFFREGMNCTLLAFTLNTCAYTTEIFAGA 124 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I + P G+ +A+ A G++ R +ILP + + S+E I +L +T+VA T T+P+ Sbjct: 125 IKATPYGEIEAARAYGMSSFTLYRRVILPSALRRALPYYSNEVILMLHATTVAFTATVPD 184 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I + A+ + S TYQ + A +YL ++ Sbjct: 185 ILKIARDVNSATYQSFNAFGIAALLYLCIS 214 >gi|319408773|emb|CBI82430.1| glutamate/aspartate transport system permease protein GltJ [Bartonella schoenbuchensis R1] Length = 250 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 104/192 (54%), Gaps = 7/192 (3%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMH----FYVWIFRGTPLLVQLFVIFYGLPHI-- 84 S ++++ +G I IR +II+ ++ +V I R PLLVQ+F+ ++ +P I Sbjct: 47 SLILAVFVGVIIGTIRTLPHTSIINRVLRAIGRVWVEIMRNIPLLVQVFLWYFVVPKIYP 106 Query: 85 -GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 I F V I +L SA ++E +RS I SI GQ A+ A+G T Q+ R+IILP+ Sbjct: 107 PAINFSPIVLITCALGFFTSARVAEQVRSGIESISSGQRYAAMAMGFTTGQSYRYIILPR 166 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I T PL+SE + I+K++S+A ++I E+ Q + + Y + +Y+++ Sbjct: 167 AIRTILPPLTSEAMGIVKNSSIAFAVSINELMQFQYQTIEEVSHVYENYLIVTILYIVIA 226 Query: 204 SFCYIIQIKIES 215 F +I+ IE Sbjct: 227 LFIFIMMTIIEK 238 >gi|168485721|ref|ZP_02710229.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC1087-00] gi|183571097|gb|EDT91625.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC1087-00] Length = 225 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/156 (32%), Positives = 90/156 (57%), Gaps = 4/156 (2%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G F + I+ ++ H +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAMVLGIFFGAMSTS-KRPILRILAHIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 FYGLP I I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYIS 136 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R I LPQ PL+++ ++++K+TS + I+ Sbjct: 137 AMRLITLPQAFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|257125595|ref|YP_003163709.1| polar amino acid ABC transporter inner membrane protein [Leptotrichia buccalis C-1013-b] gi|257049534|gb|ACV38718.1| polar amino acid ABC transporter, inner membrane subunit [Leptotrichia buccalis C-1013-b] Length = 245 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/179 (31%), Positives = 99/179 (55%), Gaps = 15/179 (8%) Query: 38 IGFFIAVIRIFF-----SDTIISLIMHF----YVWIFRGTPLLVQLFVIFYGLPHIGIVF 88 IG F + FF ++ I+++I YV I RGTP+++QL + L + VF Sbjct: 58 IGIFFGMALAFFKFQKTNNEIVNMIKDVVIDEYVDIMRGTPMVLQLLI----LSVVIAVF 113 Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 D++ +I+L +N +AY+ E +RS I SI KGQ +A+ A G+ + + II+PQ + Sbjct: 114 DNYWVAVIALGMNSAAYVEETVRSGIESIDKGQMEAARATGMPYRMAMNEIIMPQAVKNI 173 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY--QPLIIYCELAFVYLILTSF 205 L +EFI++ K TS+ I++ +I ++ + + Y +P++ + +V + L SF Sbjct: 174 LPALVNEFINLFKETSIVGYISVVDITMNSKSLQAVYYSVKPILFTGVVYYVSVKLFSF 232 >gi|116511754|ref|YP_808970.1| ABC-type amino acid transport system, permease component [Lactococcus lactis subsp. cremoris SK11] gi|116107408|gb|ABJ72548.1| amino acid ABC transporter membrane protein, PAAT family [Lactococcus lactis subsp. cremoris SK11] Length = 295 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 13/160 (8%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI--------GIVFD-----SFVAIIISLT 99 I++ + +V RGTP+LVQL++ + G+P I G ++ + + +I++ Sbjct: 93 ILNQLRALFVSFIRGTPILVQLYLSYTGIPLILKAINMNYGTNYNVNTIPAMLFVIVAFA 152 Query: 100 LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISI 159 LN AY SE IR++I S+ KGQ +A+ ++G+T Q + L + T + PL + I + Sbjct: 153 LNEGAYNSETIRAAIQSVDKGQIEAAKSLGMTNFQVFMRVTLSEAATVATAPLGNALIGL 212 Query: 160 LKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 LKSTS+A + E+ AQ I +T++ Y LA VY Sbjct: 213 LKSTSLAFVAGVVEMTARAQIIGGSTFRLFETYLALALVY 252 >gi|298489316|ref|ZP_07007331.1| Arginine ABC transporter, permease protein ArtQ [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156167|gb|EFH97272.1| Arginine ABC transporter, permease protein ArtQ [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 231 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 87/154 (56%), Gaps = 11/154 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIGIVFD-------SFVAIIISLTLNFSAYISEI 109 Y + RG P L+ + +I++G + +G +FD +F A +I+L + F AY +E+ Sbjct: 55 YSTLVRGIPELLWVLLIYFGTVNGMHALGKLFDIPDLALSAFSAGVIALGICFGAYATEV 114 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +I++IPKG +A A+G++R + + ++LPQ + L + F+ ++K T++ S I Sbjct: 115 FRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNLFMILMKDTALVSVI 174 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + EI + AQ V T Q Y AF+YL LT Sbjct: 175 GLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLT 208 >gi|242238548|ref|YP_002986729.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242130605|gb|ACS84907.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 246 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 103/180 (57%), Gaps = 14/180 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + VT+ ++ +++I+ ++G + ++R +I+ I YV +FR PL+VQ F Sbjct: 25 LISGLQVTVALSICAWIIAFLLGSLLGIMRTV-PHRLIAGIGTCYVELFRNVPLIVQFFS 83 Query: 77 IFYGLPHI-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P + G+ F + FV+ ++ L + +A + E +R+ I S+P+GQ Sbjct: 84 WYLVVPELLPTKLGMWFKAELDPNIQFFVSSMLCLGMFTAARVCEQVRAGIQSLPRGQRA 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT RH++LP PL+SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLALGLTLPQTYRHVLLPNAYRVVIPPLTSEMLNLVKNSAIASTIGLMDMAAQAGKLLD 203 >gi|268319378|ref|YP_003293034.1| ABC transporter permease component [Lactobacillus johnsonii FI9785] gi|262397753|emb|CAX66767.1| ABC transporter permease component [Lactobacillus johnsonii FI9785] Length = 219 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 96/180 (53%), Gaps = 2/180 (1%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +I S PQ + VT+ ++ + + ++++G ++I+ +F +I I+ YV + R Sbjct: 5 IIQQSLPQFV-KGFQVTVWMSFVGIIGAMVVGICCSLIQ-YFHVPVIDKIVSAYVELARN 62 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 TPLL+QLF ++Y P IG+ + +I L AY++E I K Q ++ A Sbjct: 63 TPLLIQLFFLYYAFPVIGLKMSAITCGLIGLVFLGGAYMAEGFTGGFDGISKNQIESGEA 122 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 IG+++ Q R+++ PQ S +++ I ++K TS+ S I IPE+ TA ++ Y Sbjct: 123 IGMSKWQLARYVVFPQGFALSVPAIAANIIFLIKETSIFSIIAIPELTNTALDLIGLYYH 182 >gi|332670084|ref|YP_004453092.1| polar amino acid ABC transporter, inner membrane subunit [Cellulomonas fimi ATCC 484] gi|332339122|gb|AEE45705.1| polar amino acid ABC transporter, inner membrane subunit [Cellulomonas fimi ATCC 484] Length = 287 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 8/220 (3%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D + L + TL A I+ V S + G + R+ S + + + V FR P+ Sbjct: 58 DPWVDYLLPGLASTLKAAAIAIVTSAVFGLVFGLGRLSASRAVRA-VSGAVVEFFRAVPV 116 Query: 71 LVQLFVIFYGLPHIGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 L+ + + GL + ++ VA+++ LT + +E++RS + +P+GQ +A+ A Sbjct: 117 LLMMIFFWLGLARLQLLEPRDLPLVAVVLGLTFYNGSVFAELVRSGVHGLPRGQREAALA 176 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL R Q++R + +PQ + ++S+ + ILK T++ S IT PE+ A+R+ S Sbjct: 177 VGLRRAQSLRLVEVPQALIAMLPAIASQLVVILKDTALGSIITYPELLDAARRLGSGQGN 236 Query: 188 PL--IIYCELAFVYL--ILTSFCYIIQIKIESSVTQHTYS 223 L +I L F+ + LT F ++ ++ + Sbjct: 237 ILQSLIVAALVFIVINYALTRFAGLLAGRVGRRTAGRARA 276 >gi|166213863|ref|ZP_02239898.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166205037|gb|EDR49517.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] Length = 218 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 87/141 (61%), Gaps = 1/141 (0%) Query: 64 IFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTP++VQ+ I++ LP I + D F A ++++ +N AYI+EI R ++ SI G Sbjct: 61 LIRGTPIVVQVMFIYFALPMMIPLRIDPFSAAVVTIIINSGAYIAEITRGAVPSIHSGFR 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A A+GL+++ T+ ++I P + PL +++I +K TS+ I + E+ + Q I+ Sbjct: 121 EAGLALGLSQRGTLLYVIAPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEII 180 Query: 183 STTYQPLIIYCELAFVYLILT 203 + ++ + I+ +A +YLI+T Sbjct: 181 AGNFRAMEIWSAVAVIYLIIT 201 >gi|148982289|ref|ZP_01816696.1| cystine transport system permease protein [Vibrionales bacterium SWAT-3] gi|145960554|gb|EDK25911.1| cystine transport system permease protein [Vibrionales bacterium SWAT-3] Length = 139 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 81/133 (60%), Gaps = 4/133 (3%) Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 D+F A +I LTL+F+AY++E IR++II I + Q +AS ++G+T Q +R +ILPQ Sbjct: 4 LDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSVGMTTSQAMRRVILPQATRV 63 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY----LILT 203 + L + FI ++KSTS+A T+ + EI AQ S++++ + +A +Y +ILT Sbjct: 64 ALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVVILT 123 Query: 204 SFCYIIQIKIESS 216 ++K+ + Sbjct: 124 RIQIWAEVKLNKA 136 >gi|323485959|ref|ZP_08091291.1| hypothetical protein HMPREF9474_03042 [Clostridium symbiosum WAL-14163] gi|323693047|ref|ZP_08107267.1| hypothetical protein HMPREF9475_02130 [Clostridium symbiosum WAL-14673] gi|323400721|gb|EGA93087.1| hypothetical protein HMPREF9474_03042 [Clostridium symbiosum WAL-14163] gi|323502928|gb|EGB18770.1| hypothetical protein HMPREF9475_02130 [Clostridium symbiosum WAL-14673] Length = 220 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 116/201 (57%), Gaps = 10/201 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +++ + L + TL +A I+ ++G +A+ ++ ++S + Y+ I RG Sbjct: 7 MLVQKYSGLFLEGMGYTLLLALITVTFGTVLGTLVALAKMG-KFKVLSFLATAYIEIMRG 65 Query: 68 TPLLVQLFVIFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 TPLL+QL++ ++ +P + + ++ F + +L LN +AY+SEIIR+ I ++ GQ +A+ Sbjct: 66 TPLLLQLYLFYFLVPQM-LPWEPSKFTCVCTALVLNATAYVSEIIRAGIQAVDPGQMEAA 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI---FQTAQRIV 182 ++GL Q ++ +ILPQ + L +EF++ +K TS+AST + ++ F+T + Sbjct: 125 RSLGLNTSQAMKKVILPQALKNILPALGNEFVTDIKETSLASTFFLGDLMTTFRTLNGAL 184 Query: 183 STTYQPLIIYCELAFVYLILT 203 T +PLII + +Y +LT Sbjct: 185 YLTLEPLII---VGIIYFLLT 202 >gi|33240125|ref|NP_875067.1| ABC-type amino acid transport system permease component [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237652|gb|AAP99719.1| ABC-type amino acid transport system permease component [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 299 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/199 (29%), Positives = 107/199 (53%), Gaps = 25/199 (12%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 DS+ L+ + +L + S I+ IGFF+ + RI ++ +++LI Y+ I R TPL Sbjct: 63 DSYAWALFIGWLNSLKVIFASLFIATFIGFFVGIARIG-TNILLNLISTGYITIIRQTPL 121 Query: 71 LVQL----FVIFYGLPH-------------------IGIVFDS-FVAIIISLTLNFSAYI 106 L+QL FV F GL +GI + F A+++ L++ AYI Sbjct: 122 LLQLMFWYFVGFLGLKDKAIAPLRGILSISNQGINLLGINLSAEFSALLLGLSVFTGAYI 181 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +E++R I S+P+GQW+A ++GL+ + II+PQ + L+S+++++ K++++A Sbjct: 182 AEVVRGGINSVPRGQWEAFKSLGLSDIHGLYKIIIPQALPAIIPGLTSQYLNLAKNSTLA 241 Query: 167 STITIPEIFQTAQRIVSTT 185 I +I+ I++ T Sbjct: 242 IAIGYADIYAVNDTIINQT 260 >gi|149010774|ref|ZP_01832145.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP19-BS75] gi|147765255|gb|EDK72184.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP19-BS75] Length = 225 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 92/157 (58%), Gaps = 6/157 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G F + I+ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAMVLGIFFGAMSTS-KRPILRILARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLP----HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 FYGLP HI I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHI-IMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYI 135 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R IILPQ +PL+++ ++++K+TS + I+ Sbjct: 136 SALRLIILPQAFRIILLPLTNQIVNLIKNTSTVAIIS 172 >gi|301155863|emb|CBW15331.1| arginine transporter subunit [Haemophilus parainfluenzae T3T1] Length = 209 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 96/169 (56%), Gaps = 7/169 (4%) Query: 64 IFRGTPLLVQLFVIFYGLPHI-----G--IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + RG P ++ + +I++G + G I F +F + +L+L F++Y S+ +R +I + Sbjct: 41 LLRGLPEILVVLLIYFGSTQVVEMLTGEYIEFSAFGCGVFALSLIFASYASQTLRGAIQA 100 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQW++ A+GL+R T ++I+PQ + LS++++ +LK T++ S I + ++ + Sbjct: 101 IPKGQWESGAALGLSRPYTFINLIMPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLMR 160 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 A I + T++P Y A +YL++T K+E T+ V+ Sbjct: 161 QAGYINTNTHEPFTWYGIAALIYLVITLISQAGIRKLELRFTRFERGVE 209 >gi|269139978|ref|YP_003296679.1| glutamate/aspartate transport system permease protein [Edwardsiella tarda EIB202] gi|267985639|gb|ACY85468.1| glutamate/aspartate transport system permease protein [Edwardsiella tarda EIB202] gi|304559811|gb|ADM42475.1| Glutamate Aspartate transport system permease protein GltJ [Edwardsiella tarda FL6-60] Length = 246 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 101/179 (56%), Gaps = 14/179 (7%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 ++ + VT+ ++ ++VI+ ++G + ++R S + ++I YV +FR PL+VQ F Sbjct: 26 WSGMQVTVALSLAAWVIAFLLGSLLGILRTLPSRPL-AMIGALYVELFRNVPLIVQFFTW 84 Query: 78 FYGLPHI-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + +P + G F FV+ ++ L L +A + E +R++I S+P GQ A Sbjct: 85 YLVVPELLPTDWGNWFKGELDPSIQFFVSSLLCLGLFTAARVCEQVRAAIQSLPAGQKSA 144 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+G T QT R+++LP PL+SE ++++K++++ASTI + E+ A +++ Sbjct: 145 GLAMGFTLPQTYRYVLLPNAYRVIVPPLTSEMLNLVKNSAIASTIGLMEMAAQAGKLLD 203 >gi|224827115|ref|ZP_03700211.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] gi|224600624|gb|EEG06811.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] Length = 229 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 107/207 (51%), Gaps = 21/207 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P +L A +TL +A S V+S+++G A+ ++ S ++ Y + RG P LV Sbjct: 7 LPSILEGA-ALTLEVAAASLVVSVVLGLIGAMFKMAHSRALV-WSAELYSTVVRGVPDLV 64 Query: 73 QLFVIFYG---------------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 +F++F+G P I + +A ++++ F AY++E R +I+S+ Sbjct: 65 WMFLLFFGGQMLINDVAERFGLGAPEI----NPMIAGVLTIGFIFGAYMTETFRGAIMSV 120 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKGQ +A A G++ + I PQ + + S+ ++ ++KST++ S I + ++ Sbjct: 121 PKGQMEAGAAYGMSPLRVFFRITAPQMVRFALPSFSNNWLVLVKSTALVSVIGLNDMMYK 180 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTS 204 A S T +P +Y +A +YL++T+ Sbjct: 181 ADTAKSITQEPFTVYMVVAAIYLLITT 207 >gi|325528178|gb|EGD05363.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. TJI49] Length = 500 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/233 (31%), Positives = 124/233 (53%), Gaps = 32/233 (13%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EWF P +L + + TL + + V L++G F+A+ R+ S + + F +W Sbjct: 67 EWF-----LSPPVL-SGLARTLVLTLLGAVFGLVLGAFVALARLSRSRLLAASAWTF-IW 119 Query: 64 IFRGTPLLVQLFV----------IFYGLPHIGIV-FD--------SFVAIIISLTLNFSA 104 +FR PL+V L + + G+P G+V FD F A ++ LTLN +A Sbjct: 120 LFRSIPLIVLLLILNNLGYLYEHVRLGVPFTGLVWFDVPTTDLISPFAAAVLGLTLNHAA 179 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTR-KQTIRHIILPQTITTSAVPLSSEFISILKST 163 + +E+IR I+++ +GQ +A+ A+GL R +QT+R I+LPQ + ++ IS+ K T Sbjct: 180 FSAEVIRGGILAVDQGQLEAAAALGLPRGRQTVR-IVLPQAMRAILPTAFNDLISLAKGT 238 Query: 164 SVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 S+ + +PE+F T Q I + PL++ + YLI+ + IQ++IE Sbjct: 239 SMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATV--WYLIILTALSAIQVQIE 289 >gi|296877227|ref|ZP_06901267.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 15912] gi|296431747|gb|EFH17554.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 15912] Length = 230 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 106/198 (53%), Gaps = 11/198 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 SF L A+ TL + ++ V+ G + ++ D + + + YV+ R TP + Sbjct: 11 SFLPTLVQALPATLALMFLTTVLGSAFGLVLTWAQVS-EDKVGAGLAKGYVFTLRCTPPI 69 Query: 72 VQLFVIFYGLPH-----IGIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 V LF++FYGLP +GI D FV +++++ L F+A ISE+ +++ ++IPKGQ + Sbjct: 70 VLLFLVFYGLPQFLNWWLGIDIDHWSKFVFVLVAMFLLFAAMISEVFKAAYLAIPKGQME 129 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A +IGLT QTI I+LPQ + +++ +++++ ++A TI +I ++S Sbjct: 130 AGLSIGLTPAQTIWRIVLPQAFRVALPNMTTAILNLMRDAALAYTIGFIDIMGAGNNLIS 189 Query: 184 TTYQ--PLIIYCELAFVY 199 L Y +A +Y Sbjct: 190 RNLGNYSLETYTAVAVIY 207 >gi|294083903|ref|YP_003550660.1| amino acid ABC transporter permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292663475|gb|ADE38576.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Candidatus Puniceispirillum marinum IMCC1322] Length = 298 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 38/225 (16%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP---- 69 P LL I TL +A + +++ IIG + +R + + +I YV + R P Sbjct: 63 PNLLLKGIATTLRLAFWATIVAAIIGLLMGFMRTS-KNLAMRMISRCYVELIRNIPPVVF 121 Query: 70 -------LLVQL--------------------FVIFYGLPHIGIVFDSFVAIIISLTLNF 102 L QL F +G P + F +FVA + L L Sbjct: 122 IFIFYFFLSGQLMPLIGLDDIDKNGAFVSSDIFFTLFGDPKL---FSNFVAGALCLALFE 178 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AYI+EI+R+ I S+PKGQW+A+ A+GL+ + +II PQ + PL+ +FI+++K Sbjct: 179 GAYITEIVRAGIQSVPKGQWEAARAVGLSPLDVLGNIIFPQAVRKILPPLAGQFITLIKD 238 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 +++ S I+I E+ A + S+T + + + +Y I+ CY Sbjct: 239 SAIVSLISIQELTFLATEVASSTTKVFETWIIVGAMYFII---CY 280 >gi|78065760|ref|YP_368529.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia sp. 383] gi|77966505|gb|ABB07885.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia sp. 383] Length = 237 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 105/196 (53%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S + + +AV R+ + +S + FY ++FRGTPL VQL +++ Sbjct: 21 SGLAVTLWLLVASISLGFVCAVPLAVARVS-KNKWVSTPVRFYTYVFRGTPLYVQLLLLY 79 Query: 79 YGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D+F I++ LN AY +EI +I +IP G+ +A+ A Sbjct: 80 TGMYSLEFVRSHSLLDAFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++ R +ILP + A+PL S+E I +L +T+VA T T+P+I + A+ S TY Sbjct: 140 GMSPFTMYRRVILPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYM 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL ++ Sbjct: 199 AFQSFGIAALIYLAVS 214 >gi|332296212|ref|YP_004438135.1| polar amino acid ABC transporter, inner membrane subunit [Thermodesulfobium narugense DSM 14796] gi|332179315|gb|AEE15004.1| polar amino acid ABC transporter, inner membrane subunit [Thermodesulfobium narugense DSM 14796] Length = 225 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/139 (34%), Positives = 81/139 (58%), Gaps = 2/139 (1%) Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 +I YV + TPL++Q+F ++ GLPH+ IV F +I + + AYI+E++R+ I Sbjct: 59 KIINRIYVEFIQNTPLVIQVFFLYNGLPHLDIVLPVFAVGVIGVGVYHGAYIAEVVRAGI 118 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +I +GQ +A+Y+ G T Q +R+IILPQ PL+++ +S++K+TSV + + ++ Sbjct: 119 QAIHRGQLEAAYSQGFTFWQAMRYIILPQAKIIIFPPLTNQAVSLIKNTSVMAMVAGGDL 178 Query: 175 FQTAQRIVSTT--YQPLII 191 A S Y P I Sbjct: 179 MYHADSWSSNNLYYGPAYI 197 >gi|322831960|ref|YP_004211987.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321167161|gb|ADW72860.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 228 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + Q++ +VTL +A S +++L+IG A ++ + I+S Y + RG P L Sbjct: 4 GYSQVIIQGTLVTLELAISSVILALVIGLIGAGGKLS-KNRIVSGFFGCYTTLIRGVPDL 62 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G+ D A II+L + AY +E R + +++P+G Sbjct: 63 VLMLLIFYGLQIALNSVTESLGLTQIDIDPMSAGIITLGFIYGAYFTETFRGAFMAVPRG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A G + Q R I+ P + + +++ + ILK+T++ S + + ++ + Q Sbjct: 123 QIEAATAFGFSGSQIFRRILFPAMMRFALPGIANNWQVILKATALVSLLGLNDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 TYQP VYLI T+ Sbjct: 183 AGKGTYQPFYFAIVAGVVYLIFTT 206 >gi|186476916|ref|YP_001858386.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phymatum STM815] gi|184193375|gb|ACC71340.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 237 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 15/210 (7%) Query: 5 WFN-LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W N L D + + + +TL + IS + + +AV R+ + + Y + Sbjct: 9 WRNYLYTDGYR---FTGVAITLWLLVISIGLGFCLSVPLAVARVSKKKWVAGSVW-LYTY 64 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVF----------DSFVAIIISLTLNFSAYISEIIRSS 113 IFRGTPL VQL + + GL + I+ D +++ TLN AY +EI + Sbjct: 65 IFRGTPLYVQLLLCYTGLYSLEIIRSNALTNAFFRDGMHCTLLAFTLNTCAYTTEIFAGA 124 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I + P G+ +A+ A G+++ R +ILP + + S+E I +L +T+VA T T+P+ Sbjct: 125 IKATPYGEIEAARAYGMSQFTLYRRVILPSALRRALPYYSNEVILMLHATTVAFTATVPD 184 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I + A+ + S TY+ + A +YLI++ Sbjct: 185 ILKIARDVNSATYRSFDAFGIAALLYLIIS 214 >gi|46580746|ref|YP_011554.1| amino acid ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|46450166|gb|AAS96814.1| amino acid ABC transproter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio vulgaris str. Hildenborough] gi|311234460|gb|ADP87314.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris RCH1] Length = 233 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 108/195 (55%), Gaps = 14/195 (7%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++ T ++ +S V+++++G IAV+R+ + + F FR TPLLVQ+F ++ Sbjct: 22 GVITTCQLSGLSLVLAMLLGTLIAVMRLSGVRPFVWFSVAF-TEFFRNTPLLVQIFFWYF 80 Query: 80 GLPHIGIVFDS-----------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G ++ D+ F A +ISLT+ +A+I+E IRS I SIP+ Q +AS A Sbjct: 81 G--SDAVLPDAVNQWLYKQNFEFAAGVISLTVYTAAFIAEEIRSGIFSIPRTQLEASRAC 138 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+ Q + +++LPQ PL S+ +++ K++S+ TI + E+ A++I S T+ Sbjct: 139 GLSFMQAMSYVVLPQAFRIIVPPLISQALNLFKNSSLCMTIGVMELTYMARQIESYTFHG 198 Query: 189 LIIYCELAFVYLILT 203 + +YL ++ Sbjct: 199 FEAFTVSTLIYLCIS 213 >gi|326692920|ref|ZP_08229925.1| ABC-type amino acid transport system, permease component [Leuconostoc argentinum KCTC 3773] Length = 219 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 94/166 (56%), Gaps = 7/166 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 L + +T+ ++ IS ++SLI G + +I RI + + I + + R PLL+ Sbjct: 18 LLGGLGITVGVSLISVILSLIFGSIVGIIQFERIPYFSKFVGTINN----VIRNLPLLLI 73 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 +F +++ LP IGI F A II+++ SA ++EI+R + S+ GQ++ + A GL+ Sbjct: 74 IFFVYFALPKIGIHLSVFWATIIAMSTFESAMLAEIVRGGLESVDIGQFEGARANGLSNM 133 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 QT+ +IILPQ P+ S+ IS++K TS+A I + E+ Q Sbjct: 134 QTMIYIILPQAYKKMIPPIISQLISLVKDTSLAMGIVLAELMYRGQ 179 >gi|257070103|ref|YP_003156358.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] gi|256560921|gb|ACU86768.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] Length = 232 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 9/227 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + I ++FP LL I T+ + I + ++LI+G +AV R+ + YV IF Sbjct: 1 MDAIRENFP-LLLQGIGTTVALTVIGYALALILGTLLAVARVSPIPPLRG-AATVYVEIF 58 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R PLL L +I +GLP +G++ F ++ LTL+ +A++ E +RS I ++P G +A+ Sbjct: 59 RNIPLLSLLILISFGLPDVGLLLPYFWCGVLGLTLSSAAFVCENVRSGINTVPIGHAEAA 118 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +IGL T+R ++LPQ + PL + FI + +++ S I + E+ Q + Sbjct: 119 RSIGLGFFGTLRLVVLPQAFRSMVQPLVNVFIGTVIGSALCSAIAVQEVTWVTQTLNIRY 178 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSV-------TQHTYSVD 225 Q ++++ VYLIL+ + IE +V + H ++D Sbjct: 179 AQAVLMFLIAGAVYLILSLGGAALGGVIERAVAPGGEGRSGHRATLD 225 >gi|120601966|ref|YP_966366.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris DP4] gi|120562195|gb|ABM27939.1| amino acid ABC transporter membrane protein 1, PAAT family [Desulfovibrio vulgaris DP4] Length = 237 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 108/195 (55%), Gaps = 14/195 (7%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 ++ T ++ +S V+++++G IAV+R+ + + F FR TPLLVQ+F ++ Sbjct: 26 GVITTCQLSGLSLVLAMLLGTLIAVMRLSGVRPFVWFSVAF-TEFFRNTPLLVQIFFWYF 84 Query: 80 GLPHIGIVFDS-----------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G ++ D+ F A +ISLT+ +A+I+E IRS I SIP+ Q +AS A Sbjct: 85 G--SDAVLPDAVNQWLYKQNFEFAAGVISLTVYTAAFIAEEIRSGIFSIPRTQLEASRAC 142 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+ Q + +++LPQ PL S+ +++ K++S+ TI + E+ A++I S T+ Sbjct: 143 GLSFMQAMSYVVLPQAFRIIVPPLISQALNLFKNSSLCMTIGVMELTYMARQIESYTFHG 202 Query: 189 LIIYCELAFVYLILT 203 + +YL ++ Sbjct: 203 FEAFTVSTLIYLCIS 217 >gi|260904764|ref|ZP_05913086.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Brevibacterium linens BL2] Length = 263 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/121 (37%), Positives = 74/121 (61%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRGT LLVQLF +FY P +G+ D + I +L LN+ AY +E++RSSI ++ KGQW+ Sbjct: 62 FRGTSLLVQLFWLFYVFPLLGVDLDPILCGIGALALNYGAYSAEVVRSSIKTVDKGQWEG 121 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+ L+ + + +I PQ L++ I +LK T+V S IT+ ++ + ++ + Sbjct: 122 AIALSLSPTRRMVRVIFPQAWALMIPSLATLLIQLLKGTAVVSFITLQDLTEKIDQLRQS 181 Query: 185 T 185 T Sbjct: 182 T 182 >gi|325168661|ref|YP_004280451.1| amino acid ABC transporter transmembrane protein [Agrobacterium sp. H13-3] gi|325064384|gb|ADY68073.1| amino acid ABC transporter membrane spanning protein [Agrobacterium sp. H13-3] Length = 290 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 108/203 (53%), Gaps = 13/203 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +V+TL + + V G +AV+ + ++ I +VW FRG PL+VQ+F F Sbjct: 65 GVVLTLQLTAGAMVFGTAFGCIVAVMATS-QNIVLKAIAVAFVWWFRGVPLIVQIFFWFN 123 Query: 80 ---GLPHIGI---------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 +P +GI + +A ++L L+ +A +SEIIR + ++ +GQ +A+ + Sbjct: 124 IALFIPMVGIGTYSISINDLVTPALAGFLALGLHEAANMSEIIRGGLTAVDRGQREAASS 183 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL QT+R ++LPQ I P ++ I +LK++++ S I + ++ AQ I + + Sbjct: 184 LGLQPLQTLRTVVLPQAIRLIVPPTGNQAIGMLKASAIVSVIGMQDLLTQAQAIYARNFL 243 Query: 188 PLIIYCELAFVYLILTSFCYIIQ 210 + + C + YL++T+ + Q Sbjct: 244 VIELLCVASLWYLLITTVASVGQ 266 >gi|124268064|ref|YP_001022068.1| arginine/ornithine transport system permease [Methylibium petroleiphilum PM1] gi|124260839|gb|ABM95833.1| arginine/ornithine transport system permease protein [Methylibium petroleiphilum PM1] Length = 229 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 84/156 (53%), Gaps = 12/156 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYG--------LPHIG----IVFDSFVAIIISLTLNFSAYISE 108 Y + RG P LV + ++F+G +G I D FVA ++++ F AY+ E Sbjct: 52 YTTLIRGVPDLVLMLLVFFGGQLAVNALAQQLGFADYIDVDPFVAGVLTIGFVFGAYLGE 111 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 R + +++ GQ +A A G++R Q +R ++LPQ + + LS+ ++ ++KST++ S Sbjct: 112 TFRGAFLALAPGQREAGLACGMSRWQVLRRLLLPQMLRYALPGLSNNWLVLVKSTAIVSV 171 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 I + ++ A + T +P + Y A +YL +TS Sbjct: 172 IGLNDMMLRATQAAGATREPFVFYASAALIYLAITS 207 >gi|195977745|ref|YP_002122989.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974450|gb|ACG61976.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 159 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 53/140 (37%), Positives = 83/140 (59%), Gaps = 12/140 (8%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 Y +V + AC+ F IIG + +I+ + S ++ YVWIFRGTP++VQ+ + Sbjct: 15 YGVLVTIMISACVVF-FGTIIGLLVTLIKRSHIKPL-SWLVSLYVWIFRGTPMVVQIMIA 72 Query: 78 F-----YGLPHIG-----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 F LP IG + F + II ++LN AYISEI+R+ I ++PKGQ +A+Y+ Sbjct: 73 FAWLHFNHLPIIGFGVLDLDFSRLLPGIIIISLNSGAYISEIVRAGIEAVPKGQLEAAYS 132 Query: 128 IGLTRKQTIRHIILPQTITT 147 +G+ K +R++ILPQ + T Sbjct: 133 LGIRPKHAMRYVILPQALRT 152 >gi|322378588|ref|ZP_08053028.1| glutamine ABC transporter, permease protein [Helicobacter suis HS1] gi|321148996|gb|EFX43456.1| glutamine ABC transporter, permease protein [Helicobacter suis HS1] Length = 219 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 75/127 (59%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV I R TPLL+QLF ++YGL IG + II L+ AY++E + ++PK Sbjct: 58 YVEIARNTPLLIQLFFLYYGLKEIGFSLSAMQCAIIGLSFLGGAYMAESFLLGLKALPKV 117 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++GL R Q++ +++LPQ++ S L + I +LK TSV S I + ++ A+ Sbjct: 118 QTEAALSLGLNRLQSLYYVLLPQSLAISLPSLGANVIFLLKETSVVSAIALADVMFVAKD 177 Query: 181 IVSTTYQ 187 ++ Y+ Sbjct: 178 LIGIYYK 184 >gi|227499009|ref|ZP_03929146.1| ABC amino acid transporter permease [Acidaminococcus sp. D21] gi|226904458|gb|EEH90376.1| ABC amino acid transporter permease [Acidaminococcus sp. D21] Length = 229 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 109/198 (55%), Gaps = 9/198 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ S P+L + VTL + +S V LI+ +AV + S I+S ++ R T Sbjct: 1 MLASLPKL-AGYLSVTLFVTLLSVVPGLILAALLAVWKDQGS-RIVSGGYRIFISFIRST 58 Query: 69 PLLVQLFVIFYGLPHI--GIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 P +VQLFV+++G+P + G D + +++ L+ + Y +EI+R S+ +I G+ Sbjct: 59 PFIVQLFVVYFGVPQLLSGAGVDVSDLPPLLFVLVIFALHVAGYGAEILRGSLAAIQPGE 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++G+T Q R I+LPQ S PL +E IS LK T++ + I ++ + A+ + Sbjct: 119 KEAAASLGMTDAQIYRRIVLPQAFVLSIPPLVNEVISTLKGTALIFNVGIVDVMRQAELM 178 Query: 182 VSTTYQPLIIYCELAFVY 199 + + L +Y ++A +Y Sbjct: 179 GGNSQRYLELYVDVAILY 196 >gi|270293188|ref|ZP_06199399.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] gi|270279167|gb|EFA25013.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] Length = 225 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 91/156 (58%), Gaps = 4/156 (2%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G F V+ I+ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAIVLGIFFGVLSTS-KHQILRILARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 FYGLP I I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISEHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYIS 136 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R IILPQ PL+++ ++++K+TS + I+ Sbjct: 137 AMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|24379378|ref|NP_721333.1| putative amino acid ABC transporter, permease protein [Streptococcus mutans UA159] gi|24377307|gb|AAN58639.1|AE014934_3 putative amino acid ABC transporter, permease protein [Streptococcus mutans UA159] Length = 230 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 89/149 (59%), Gaps = 10/149 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLP-------HIGIV-FDSFVAIIISLTLNFSAYISEIIRS 112 YV+I R TP +V LF++FYGLP H+ + + + +++++ L F+A ISE+ +S Sbjct: 59 YVFILRCTPPIVLLFLVFYGLPEFLTWWLHLDVDDWSRAIFVVVTMVLLFAASISEVFKS 118 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +++PKGQ +A +IGLT QT R I+LPQT + +++ ++++K ++A TI + Sbjct: 119 AYLAVPKGQLEAGLSIGLTGFQTFRRILLPQTFQIALPNITTAILNLMKDAALAYTIGLV 178 Query: 173 EIFQTAQRIVSTTYQ--PLIIYCELAFVY 199 ++ I+S L Y +AF+Y Sbjct: 179 DVMGAGNLIISRNLGNYSLETYTAVAFIY 207 >gi|218512395|ref|ZP_03509235.1| probable amino acid ABC transporter, permease protein [Rhizobium etli 8C-3] Length = 173 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 82/143 (57%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ FRGT + VQLF +++ LP G+ A +++L LN AY +E++R ++ ++ + Sbjct: 8 YIEFFRGTSIFVQLFWVYFVLPFAGLTLTPLQAGVLALGLNVGAYGAEVVRGAVKAVGRE 67 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A+ L+R Q +RH+ILPQ + + I +LK T+V S I++ ++ AQ Sbjct: 68 QSEACVALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTDMTFQAQV 127 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + + T L+ + + +Y ++ Sbjct: 128 VRAQTGNTLVPFATILILYFLMA 150 >gi|320011628|gb|ADW06478.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces flavogriseus ATCC 33331] Length = 300 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 113/217 (52%), Gaps = 27/217 (12%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFVIF 78 A+ VTL + V +G +A +R+ SD+ + + + Y+W FR PL+VQL F Sbjct: 80 AVWVTLQLTFYGTVTGFALGIVLAFMRL--SDSPFLRAVSYAYIWAFRSIPLIVQLLFWF 137 Query: 79 ----------YGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIISIPK 119 +G+P G F SF A ++ L L+ +AY +EI+R ++++ Sbjct: 138 NLAYLYKELQFGIP-FGPGFVSFDTMNLVGAMSAAVLGLALHQAAYAAEIVRGGVLAVDG 196 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ A+G+ R + +R I+LPQ + + ++E IS+ K TS+ S + I E+F Q Sbjct: 197 GQLEAAAALGIPRLRQLRRIVLPQAMRSILPNAANEIISLFKGTSIVSVMAIGELFYQVQ 256 Query: 180 RIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 + + PL++ + Y++LT+ ++Q +E Sbjct: 257 VVYGRNGRVVPLLMVATV--WYILLTTVLSVLQHYVE 291 >gi|302525506|ref|ZP_07277848.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. AA4] gi|302434401|gb|EFL06217.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. AA4] Length = 215 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 57/187 (30%), Positives = 101/187 (54%), Gaps = 2/187 (1%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV-F 88 I+ SL++G +A++R+ ++ I YV + R TPL + + + P + IV Sbjct: 24 IAGACSLVLGTILAMLRVS-PVPVLRAIGTTYVTVLRNTPLTLVFAFLVFAYPLLDIVKI 82 Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 D F ++LT+ SA+I E++RS I ++P GQ +A A+GL+ Q + I+LPQ + + Sbjct: 83 DYFPTAAVALTIYTSAFICEVVRSGINTVPLGQAEAGRALGLSSGQILGGIVLPQALRSV 142 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 PL S I++LK+T++AS ++ E Q + +I +A ++IL S + Sbjct: 143 VPPLVSMLIALLKNTTIASGFSVAEAGAIRQYVSERGDNQMIALLWVALGFIILVSVLSL 202 Query: 209 IQIKIES 215 +Q +E Sbjct: 203 VQRSLEK 209 >gi|304398230|ref|ZP_07380104.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304354096|gb|EFM18469.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 229 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 104/206 (50%), Gaps = 12/206 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + ++ +VTL +A S V+++++G A ++ S + ++I Y + RG P L Sbjct: 4 GYSDVILRGTLVTLELALTSVVLAVLLGLIGAGAKLSRSRPL-AMIFEGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G+ D VA II+L + AY +E R + +++P+G Sbjct: 63 VLMLLIFYGLQIVLNQVTDALGMAQFDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPQG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A G T Q R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 QIEAATAFGFTSAQVFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFC 206 +T+QP +YL+ T+ Sbjct: 183 AGKSTWQPFYFAIVAGVIYLVFTTLS 208 >gi|221197220|ref|ZP_03570267.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia multivorans CGD2M] gi|221203892|ref|ZP_03576910.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia multivorans CGD2] gi|221210915|ref|ZP_03583895.1| octopine transport system permease protein OccM [Burkholderia multivorans CGD1] gi|221169871|gb|EEE02338.1| octopine transport system permease protein OccM [Burkholderia multivorans CGD1] gi|221176058|gb|EEE08487.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia multivorans CGD2] gi|221183774|gb|EEE16174.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia multivorans CGD2M] Length = 237 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 99/183 (54%), Gaps = 13/183 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-----PHI 84 V+S+++GF +AV I S+ IS + Y ++FRGTPL VQL + + G+ H Sbjct: 31 VVSIVLGFALAVPLAIARASSNRWISGPVWLYTYVFRGTPLYVQLLMCYTGIYSLQVVHD 90 Query: 85 GIVFDSFVAIIISLTL-----NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 ++ D+F ++ TL N +AY +EI +I + P G+ +A A G++R + + Sbjct: 91 HVLLDAFFRNAMNCTLLAFVLNEAAYATEIFAGAIKATPSGEIEAGMAYGMSRFKLYTRV 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILP + S S+E I +L +T++A T T+P+I + + + S TY Y A +Y Sbjct: 151 ILPSALRRSLPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYMSFQAYGIAAVIY 210 Query: 200 LIL 202 ++ Sbjct: 211 AVV 213 >gi|70730425|ref|YP_260166.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68344724|gb|AAY92330.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 241 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 95/179 (53%), Gaps = 15/179 (8%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-------------PHIGIVFDSFVAIIISLTLNFSAYIS 107 Y + RG P LV + +IFY L P++ I D FVA I++L + AY + Sbjct: 65 YTTLIRGVPDLVLMLLIFYSLQGWLTALTELLDWPYMEI--DPFVAGIVTLGFIYGAYFT 122 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E R +I+S+P+GQ +A+ A GL+R Q RH++ PQ + + L + ++ +LK+T++ S Sbjct: 123 ETFRGAILSVPRGQQEAAAAFGLSRMQRFRHVVFPQMMRFALPSLGNNWLVLLKATALVS 182 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 I + ++ + AQ +T+ L A +YL++TS + ++E Q + + Sbjct: 183 IIGLTDLVKVAQEAGKSTFNMLDFLLLAAALYLLITSASNQLLRRLERHYNQGVRGLSR 241 >gi|330951075|gb|EGH51335.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 277 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/177 (35%), Positives = 106/177 (59%), Gaps = 1/177 (0%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS 97 +GF A+ R+ S + I FY FRGTPLL+Q+ +I+ GLP +GIV + A +I+ Sbjct: 91 LGFVTALARLS-SSAVAFGIASFYASFFRGTPLLIQILLIYLGLPQLGIVPGAITAGVIA 149 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 L+LN+ AY+SEI R+ II + GQ +A+ A+ L Q + LPQ + T P +++FI Sbjct: 150 LSLNYGAYLSEIFRAGIIGVSAGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQFI 209 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S+LK +S+ S + + E+ AQ ++Y+ + + A +Y I++ ++Q ++E Sbjct: 210 SMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266 >gi|330811617|ref|YP_004356079.1| ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379725|gb|AEA71075.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 219 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 2/161 (1%) Query: 61 YVWIFRGTPLLVQLFVIFY--GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y+ +FRGT LLVQLF +F+ LP + + I+ L L+ AY +E++R +I S+ Sbjct: 51 YIEVFRGTSLLVQLFWLFFVLPLPPFNVELSPYAVAIVGLGLHIGAYGAEVMRGAISSVA 110 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ++A A+ + + IILPQ + + P ++ I +LK+TS+ S IT+ ++ A Sbjct: 111 KGQYEACTALNFSGFTRFKRIILPQALLAAIPPGTNLLIELLKNTSLVSLITLSDLSFRA 170 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 +++ T+Q L I+ +Y IL IE +++ Sbjct: 171 RQLDQATFQTLEIFSLALVMYFILAQAINFGMRHIERRLSR 211 >gi|320334507|ref|YP_004171218.1| polar amino acid ABC transporter inner membrane subunit [Deinococcus maricopensis DSM 21211] gi|319755796|gb|ADV67553.1| polar amino acid ABC transporter, inner membrane subunit [Deinococcus maricopensis DSM 21211] Length = 272 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 95/174 (54%), Gaps = 10/174 (5%) Query: 39 GFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG----LPHIGIVF-----D 89 G + V R+ ++ ++ YV FR TPLLVQ+F +G LP + Sbjct: 79 GTVVGVARLS-ANPVVRTAASAYVEFFRNTPLLVQIFFWNFGVLNVLPDAAKTWLNAHQP 137 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 A+I +L++ S+YI+E IR+ I SIP GQ +A+ ++GL T+R +ILPQ Sbjct: 138 EQWAVIAALSVYTSSYIAETIRAGIQSIPHGQTEAAQSLGLGGLDTLRLVILPQAFRVVL 197 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL S+F+++ K++S+AS I + E+F ++ S T++ + YLIL+ Sbjct: 198 PPLGSQFLNLTKNSSLASQIGVAELFYYGTQVQSYTFRGFESITAITIAYLILS 251 >gi|194365477|ref|YP_002028087.1| polar amino acid ABC transporter inner membrane subunit [Stenotrophomonas maltophilia R551-3] gi|194348281|gb|ACF51404.1| polar amino acid ABC transporter, inner membrane subunit [Stenotrophomonas maltophilia R551-3] Length = 581 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 112/211 (53%), Gaps = 26/211 (12%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF----------VIFYGLPHIGIV 87 +G +A+ R+ S ++S + YVW+FR PLLV L I G+P GI Sbjct: 90 LGTLLALARVSGS-PLLSAVSWGYVWLFRSIPLLVLLLLLNNLGYLYSTIELGIPFTGIS 148 Query: 88 FDS---------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 S F A ++ LTLN +A+ +E+IR I+S+ GQ++A+ A+GL R + +R Sbjct: 149 LFSYPTTQLIGVFTAAVLGLTLNQAAFSAEVIRGGILSVDHGQYEAAAALGLPRGRQVRR 208 Query: 139 IILPQTITTSAVPLS-SEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCEL 195 IILPQ + S +P + ++ I + KSTSV + +PE+F T Q I + PL++ + Sbjct: 209 IILPQAM-RSILPAAFNDVIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVVPLLMVATV 267 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 YL++ + ++Q ++E + ++ Sbjct: 268 --WYLVILTVLSLLQRRVEQRFARGQLQRER 296 >gi|183598312|ref|ZP_02959805.1| hypothetical protein PROSTU_01702 [Providencia stuartii ATCC 25827] gi|188020486|gb|EDU58526.1| hypothetical protein PROSTU_01702 [Providencia stuartii ATCC 25827] Length = 222 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 121/218 (55%), Gaps = 18/218 (8%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +LI+D P L ++ +T ++F+++++ +++ IIS + Y+ +F Sbjct: 3 DLILDILPGL-PTSLSLTFSALFVAFILAVLFTLILSL-----KTPIISQAVKVYITLFT 56 Query: 67 GTPLLVQLFVIFYG------LPHIGIVFD----SFVAIIISLTLNFSAYISEIIRSSIIS 116 GTPLLVQ F+I+ G L + ++++ +V +I+L LN +AY + + ++ + Sbjct: 57 GTPLLVQFFLIYNGPSQFKSLQNYPVLWEFISTPWVCAMIALALNSAAYSTLLFHGAVKA 116 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP GQW + A+G+++ QT+R IILP S S+E + I KSTS+ASTIT+ +I Sbjct: 117 IPSGQWQSCQALGMSKAQTMR-IILPYAFKRSLSSYSNEVVLIFKSTSLASTITMMDIMG 175 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + ++ ++ ++ + +YL++ + II IE Sbjct: 176 YSSQVFGQSWD-VMAFVAAGIIYLVVNAILTIIMRFIE 212 >gi|161521538|ref|YP_001584965.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189352292|ref|YP_001947919.1| polar amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] gi|160345588|gb|ABX18673.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189336314|dbj|BAG45383.1| polar amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 237 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 98/183 (53%), Gaps = 13/183 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+S+++GF +AV I S+ IS + Y ++FRGTPL VQL + + G+ + +V D Sbjct: 31 VVSIVLGFALAVPLAIARASSNRWISGPVWLYTYVFRGTPLYVQLLMCYTGIYSLQVVHD 90 Query: 90 ----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + +++ LN +AY +EI +I + P G+ +A A G++R + + Sbjct: 91 HVLLDAFFRNAMNCTLLAFVLNEAAYATEIFAGAIKATPSGEIEAGMAYGMSRFKLYTRV 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILP + S S+E I +L +T++A T T+P+I + + + S TY Y A +Y Sbjct: 151 ILPSALRRSLPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYMSFQAYGIAAVIY 210 Query: 200 LIL 202 ++ Sbjct: 211 AVV 213 >gi|289678375|ref|ZP_06499265.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. syringae FF5] Length = 277 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/177 (35%), Positives = 106/177 (59%), Gaps = 1/177 (0%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS 97 +GF A+ R+ S + I FY FRGTPLL+Q+ +I+ GLP +GIV + A +I+ Sbjct: 91 LGFVTALARLS-SSAVAFGIASFYASFFRGTPLLIQILLIYLGLPQLGIVPGAITAGVIA 149 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 L+LN+ AY+SEI R+ II + GQ +A+ A+ L Q + LPQ + T P +++FI Sbjct: 150 LSLNYGAYLSEIFRAGIIGVSAGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQFI 209 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S+LK +S+ S + + E+ AQ ++Y+ + + A +Y I++ ++Q ++E Sbjct: 210 SMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266 >gi|226330765|ref|ZP_03806283.1| hypothetical protein PROPEN_04685 [Proteus penneri ATCC 35198] gi|225201560|gb|EEG83914.1| hypothetical protein PROPEN_04685 [Proteus penneri ATCC 35198] Length = 222 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/225 (28%), Positives = 120/225 (53%), Gaps = 20/225 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++ I+D P L ++ +T ++F +S+++ F +A+ +IS I+ Y+ +F Sbjct: 2 WDYIVDILPGL-PTSLSLTFVALLVAFTLSVLMTFVLAL-----KTPVISQIVKAYITLF 55 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAI-----------IISLTLNFSAYISEIIRSSI 114 GTPLLVQ F+I+YG P V +F + +++L LN +AY + + ++ Sbjct: 56 TGTPLLVQFFLIYYG-PGQFPVLKNFPTMWELLSTPWFCAMVTLALNSAAYSTLLFYGAV 114 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +IP GQW + A+G++ QT R +ILP + S+E + I KSTS+ASTIT+ E+ Sbjct: 115 RAIPSGQWQSCQALGMSPVQTAR-VILPYAFKRALSSYSNEVVLIFKSTSLASTITLLEL 173 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 ++++ +Y ++++ +YL + ++ IE + Sbjct: 174 TGYSRQVFGQSYD-VMVFVAAGIIYLCINGILTLLMRLIEKKALE 217 >gi|313113063|ref|ZP_07798698.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310624614|gb|EFQ07934.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 214 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 73/127 (57%), Gaps = 7/127 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGI-------VFDSFVAIIISLTLNFSAYISEIIRSS 113 +VW+ RGTPL++Q+ VI+ G +G+ VA +++ +N++ Y SEI R Sbjct: 49 FVWVIRGTPLMLQIIVIYLGPGLLGMNNPWPSGSGGRMVAAVVAFAINYACYFSEIYRGG 108 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++PKGQ +A +G+T+ Q + L Q + P+ +E I+++K TS+A+TI E Sbjct: 109 IEAVPKGQTEAGQVLGMTKTQIFFKVTLLQVVKRILAPMGNEVITLVKDTSLANTIANKE 168 Query: 174 IFQTAQR 180 I A+ Sbjct: 169 IIMMAKE 175 >gi|238758026|ref|ZP_04619207.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia aldovae ATCC 35236] gi|238703780|gb|EEP96316.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia aldovae ATCC 35236] Length = 246 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 115/214 (53%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ ++VI+ +G ++R + ++S I YV +FR PL+VQ F Sbjct: 25 IWSGFQVTVALSLCAWVIAFFVGSLFGILRTV-PNRLLSGIGTCYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F S F++ ++ L L +A + E +R+ I S+P+GQ Sbjct: 84 WYLVIPELLPVDIGMWFKSELDPNIQFFLSSMMCLGLFTAARVCEQVRAGIQSLPRGQKA 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 204 YSAHAYESFTAITLGYVLINAVIMLLMRLVEKKV 237 >gi|227819410|ref|YP_002823381.1| ABC transporter permease [Sinorhizobium fredii NGR234] gi|227338409|gb|ACP22628.1| putative permease component of ABC transporter [Sinorhizobium fredii NGR234] Length = 224 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/158 (29%), Positives = 86/158 (54%), Gaps = 3/158 (1%) Query: 33 VISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 +++++ G I ++ F +++ YV I R TP+LV + ++ LP +G+ Sbjct: 33 IVAILAGCVIGLVTAFGLVSKSSVLRKPAGLYVTIIRNTPILVLVLFSYFALPELGVRLG 92 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 + +++L + AY++E+ R +I++P GQ +A AIGLT Q II+P + Sbjct: 93 KIESFVLTLAIYSGAYLAEVFRGGLIAVPPGQREAGLAIGLTEMQIRTSIIIPLMLRNVL 152 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 L S IS+ K TS+A+ I +PE+ A++I T++ Sbjct: 153 PSLGSTMISLFKDTSLAAAIAVPELTFEARKINVETFR 190 >gi|330900855|gb|EGH32274.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] Length = 277 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/177 (35%), Positives = 106/177 (59%), Gaps = 1/177 (0%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS 97 +GF A+ R+ S + I FY FRGTPLL+Q+ +I+ GLP +GIV + A +I+ Sbjct: 91 LGFVTALARLS-SSAVAFGIASFYASFFRGTPLLIQILLIYLGLPQLGIVPGAITAGVIA 149 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 L+LN+ AY+SEI R+ II + GQ +A+ A+ L Q + LPQ + T P +++FI Sbjct: 150 LSLNYGAYLSEIFRAGIIGVSAGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQFI 209 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S+LK +S+ S + + E+ AQ ++Y+ + + A +Y I++ ++Q ++E Sbjct: 210 SMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266 >gi|221231431|ref|YP_002510583.1| amino acid ABC transporter permease [Streptococcus pneumoniae ATCC 700669] gi|298229829|ref|ZP_06963510.1| putative amino acid ABC transporter, permease protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255469|ref|ZP_06979055.1| putative amino acid ABC transporter, permease protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502400|ref|YP_003724340.1| amino acid ABC superfamily transporter membrane protein [Streptococcus pneumoniae TCH8431/19A] gi|220673891|emb|CAR68397.1| putative amino acid ABC transporter, permease protein [Streptococcus pneumoniae ATCC 700669] gi|298237995|gb|ADI69126.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pneumoniae TCH8431/19A] Length = 225 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 11/150 (7%) Query: 32 FVISLIIGFFI--AVIRIFFS------DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 F ++L IGFFI V+ IFF I+ ++ H +V ++ TPLLVQ ++FYGLP Sbjct: 23 FTLALAIGFFILAMVLGIFFGAMSTSKRPILRILAHIFVEFYQNTPLLVQFVIVFYGLPL 82 Query: 84 IG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 I I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T +R I Sbjct: 83 ISDHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIT 142 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTIT 170 LPQ PL+++ ++++K+TS + I+ Sbjct: 143 LPQAFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|54293481|ref|YP_125896.1| hypothetical protein lpl0530 [Legionella pneumophila str. Lens] gi|53753313|emb|CAH14760.1| hypothetical protein lpl0530 [Legionella pneumophila str. Lens] Length = 215 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 106/197 (53%), Gaps = 4/197 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 IV+T+ + +I +++G +++ R + +++ ++ I RGTPL++QL I++ Sbjct: 14 GIVLTMQLLTGGMLIGVLLGTLLSICR---HQGVACFVINRFISILRGTPLILQLSFIYF 70 Query: 80 GLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 +P +G+ VA I++ LN SAY +EI+R+ I S+PKGQ++A+ + + + Sbjct: 71 AVPVLLGMRPSILVAGIVAFGLNSSAYFAEILRAGIESLPKGQFEAALTLQIPTFYLWKD 130 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 IILPQ + +E I++LK T++ STI ++ + AQ + + + + C F Sbjct: 131 IILPQVARNIFPAMINEMIALLKETALISTIGGMDLMRQAQTLAAQQFTYFMPLCITGFY 190 Query: 199 YLILTSFCYIIQIKIES 215 Y L + KIE Sbjct: 191 YYSLVLLLEALGKKIEK 207 >gi|320095231|ref|ZP_08026931.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces sp. oral taxon 178 str. F0338] gi|319977835|gb|EFW09478.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces sp. oral taxon 178 str. F0338] Length = 225 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 97/168 (57%), Gaps = 4/168 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAV-IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + VTL ++ +S +SL++G + + +R + + +M Y+ R P +V LF+ + Sbjct: 21 GLAVTLGVSAVSVALSLVLGVGVGLAMRSRLAP--LRWLMRAYLEFVRIMPQIVLLFLAY 78 Query: 79 YGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 +GL + G+ D A ++ TL +A + +++R ++ISIP+ Q++++ A+GL +Q +R Sbjct: 79 FGLTRLTGVNLDGITASVLVFTLWGAAEMGDLVRGALISIPRHQYESAEALGLDARQAMR 138 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +ILPQT+ A P + ++K+TS+ I + E+ + Q+I+ Sbjct: 139 FVILPQTVRRLAPPAVNLVTRMVKTTSLVVLIGVVEVLKVGQQIIDAN 186 >gi|170698477|ref|ZP_02889549.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170136648|gb|EDT04904.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 229 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 12/219 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +I F LL+A V T+ +A +S SL++G A ++ ++ +S I FY + R Sbjct: 1 MIFQGFGPLLWAGTVETVKLAVLSLAASLVLGLAGAAAKLS-TNRALSWIGTFYTTLIRA 59 Query: 68 TPLLVQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 P LV + ++FYG+ +G I D FVA +I+L + AY +E R + ++ Sbjct: 60 VPDLVLMLLLFYGIQILLNMATDALGWDQIDIDPFVAGVITLGFIYGAYFTETFRGAFLA 119 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ +A +A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + Sbjct: 120 VPRGQLEAGFAYGMSGWRVFHRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVK 179 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +Q +T +YL +T+ ++ +E Sbjct: 180 ASQDAGKSTLDFFFFTLAAGAIYLAITTVSNVVLHHLEK 218 >gi|304395107|ref|ZP_07376991.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304357360|gb|EFM21723.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 234 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 16/207 (7%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGTPL 70 P+LL A LP+ +++I+GFF+A+I FF ++S + YV R P+ Sbjct: 8 PELLSA-----LPLTLGIMFVAMIVGFFLALIATFFRVRRIPVLSQLADLYVSYARSVPV 62 Query: 71 LVQLFVIFYGLPHI--GIVFDSF----VAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 ++QLFV FYG+P I F+ F VA +I L+L Y+SE++R + +++ +GQ DA Sbjct: 63 VLQLFVAFYGMPLITDNFGFNDFFTANVAAMIGLSLYHGGYLSEVMRPAYLAVERGQHDA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G + +Q + ++ PQ + + + I ++ + ++ I ++ TA I+ Sbjct: 123 TDSLGYSFRQKMLRVVGPQAVHFALPGYGNAIIYLIHNVALVMYIGAADVMATAHLIMER 182 Query: 185 TYQ--PLIIYCELAFVYLILTSFCYII 209 Y Y LA +Y +L +++ Sbjct: 183 DYNQYQFGTYLVLAVLYSLLCGVAWLV 209 >gi|218517086|ref|ZP_03513926.1| probable amino acid ABC transporter, permease protein [Rhizobium etli 8C-3] Length = 170 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 74/129 (57%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV + R P+LV + F+ LP +G+ D + ++ L+L AY++E+ R+ ++SIP Sbjct: 8 RIYVTVIRNLPILVLVLFAFFALPQMGLRLDKMKSFVLVLSLYSGAYLAEVFRAGLLSIP 67 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +G +A AIGLT Q II P + LSS IS+ K TS+A+ I +PE+ A Sbjct: 68 RGLTEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSSTIISLFKDTSLAAAIAVPELTFAA 127 Query: 179 QRIVSTTYQ 187 ++I +++ Sbjct: 128 RKINVESFR 136 >gi|323170778|gb|EFZ56428.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli LT-68] Length = 246 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/214 (23%), Positives = 117/214 (54%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ ++G F ++R + +S + YV +FR PL+VQ F Sbjct: 25 IWSGFQVTIALSICAWIIAFLVGSFFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P I + F + F++ ++ L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVIPELLPEKIDMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 204 YSAHAWESFTAITLAYVLINAVIMLVMTLVERKV 237 >gi|311107900|ref|YP_003980753.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 15 [Achromobacter xylosoxidans A8] gi|310762589|gb|ADP18038.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 15 [Achromobacter xylosoxidans A8] Length = 230 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 107/203 (52%), Gaps = 6/203 (2%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y W I+ + + TL A S V+S++ G +A+ + ++ + YV Sbjct: 8 YNWR--IVSQYTGQFATGLANTLIAAGASLVLSVLAGIPLALAHMS-PRALVWRPVAAYV 64 Query: 63 WIFRGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 R TPLLVQ+++++Y +P + + + I+++TL+ +AY+SEIIR I S+P+ Sbjct: 65 QFIRSTPLLVQIYLVYYAVPMLVPGAKGWSEMLLGIMAMTLHHAAYMSEIIRVGIESVPR 124 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ + + A G+ Q +R+++LPQ + PL + ++K TS+ S IT+ E+ Sbjct: 125 GQIEGAKACGMNYGQRLRYVVLPQAFANTLPPLLGQTAVLIKDTSLLSLITVFELVAAGV 184 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 ++ S P + +A YL++ Sbjct: 185 QMNSDRIVPNESFLTIAAGYLLI 207 >gi|153853349|ref|ZP_01994758.1| hypothetical protein DORLON_00747 [Dorea longicatena DSM 13814] gi|149754135|gb|EDM64066.1| hypothetical protein DORLON_00747 [Dorea longicatena DSM 13814] Length = 216 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/216 (26%), Positives = 112/216 (51%), Gaps = 8/216 (3%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I + + L + ++ I ++ + SL +G +A R+ + I Y+ I RGTP Sbjct: 3 IGTLIRELGGGMWISAEIFILTLLFSLPLGLVVAFGRMS-KIAPVRWISKLYISIMRGTP 61 Query: 70 LLVQLFVIFYGLPH--IGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 L++QL V+++G P+ G+ + A++I +N++AY +EI R I +IP GQ++A Sbjct: 62 LMLQLMVVYFG-PYYLFGMRISTGYRMTAVLIGFAINYAAYFAEIYRGGIEAIPVGQYEA 120 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + +G ++ QT I+ PQ +++E I+++K TS+A + + E+F A++I + Sbjct: 121 AKVLGYSKGQTFFRIVFPQVCKHILPAVTNEIITLVKDTSLAFVLAVTEMFTMAKQIAAA 180 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ Y Y + +I KIE + + Sbjct: 181 Q-TSMVPYIAAGIFYYVFNLLVAMIMEKIEEKLNYY 215 >gi|307609295|emb|CBW98771.1| hypothetical protein LPW_05701 [Legionella pneumophila 130b] Length = 215 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 106/197 (53%), Gaps = 4/197 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 IV+T+ + +I +++G +++ R + +++ ++ I RGTPL++QL I++ Sbjct: 14 GIVLTMQLLTGGMLIGVLLGTLLSICR---HQGVACFVINRFISILRGTPLILQLSFIYF 70 Query: 80 GLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 +P +G+ VA I++ LN SAY +EI+R+ I S+PKGQ++A+ + + + Sbjct: 71 AVPVLLGMRPSILVAGIVAFGLNSSAYFAEILRAGIESLPKGQFEAALTLQIPTFYLWKD 130 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 IILPQ + +E I++LK T++ STI ++ + AQ + + + + C F Sbjct: 131 IILPQVARNIFPAMINEMIALLKETALISTIGGMDLMRQAQTLAAQQFTYFMPLCITGFY 190 Query: 199 YLILTSFCYIIQIKIES 215 Y L + KIE Sbjct: 191 YYSLVLLLEALGKKIEK 207 >gi|300718193|ref|YP_003742996.1| polar amino acid ABC transporter inner membrane subunit [Erwinia billingiae Eb661] gi|299064029|emb|CAX61149.1| polar amino acid ABC transporter, inner membrane subunit [Erwinia billingiae Eb661] Length = 216 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 113/196 (57%), Gaps = 8/196 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLI---IGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + P+L ++VTL + ++ ++SL+ IG ++ + R + LI YV + Sbjct: 8 VTAGLPEL-GRGLLVTLELTALAALVSLVLGQIGCYLQLCRSWPPR----LIGRLYVSLM 62 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTP +VQLFV+F+ LP +G+ +A ++++ +N AY++EI+R + + +GQ +A+ Sbjct: 63 RGTPAIVQLFVVFFTLPLLGLGGQPLLAAVVAIGMNSGAYVAEILRVNRRLVSRGQLEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +GL+R T +II PQ + S L +EF +LK+T +AS + + E+ Q +++ + Sbjct: 123 RTLGLSRWLTWWYIINPQVMRASLPMLVNEFTILLKTTPLASVVALTELTYAGQIVIARS 182 Query: 186 YQPLIIYCELAFVYLI 201 Y+ + ++ YL+ Sbjct: 183 YEATQVMLLVSLGYLL 198 >gi|288871381|ref|ZP_06117362.2| amino acid ABC transporter, amino acid-binding protein/permease protein [Clostridium hathewayi DSM 13479] gi|288863723|gb|EFC96021.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Clostridium hathewayi DSM 13479] Length = 288 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 22/221 (9%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSD--------TIISLIMHFYVWI 64 LL AA T+ IA + I +IG + +IR + D T + +M YV I Sbjct: 58 LLGAA--KTMKIALVGTSIGCLIGLAVGIIRTIPVKKDDRMARKVFLTAVKAVMAAYVEI 115 Query: 65 FRGTPLLVQLFVIFYGLP-----HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FRGTP++VQ +F+G ++ I F +F + ++N AY++E +R I S Sbjct: 116 FRGTPMMVQAMFLFFGASAVFQINMSIGFAAFFIV----SINTGAYMAESVRGGINSTDP 171 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ + + A+G+T QT+ ++LPQ + + + I +K T V S I + E+F T++ Sbjct: 172 GQTEGAKALGMTHVQTMVLVVLPQALRNIMPQIGNNLIINIKDTCVLSVIGVVELFYTSK 231 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + Y+ + +Y +LT C I + IE + + Sbjct: 232 GVAGAYYRYFEAFTITMVLYFVLTFTCSRILLLIEKRMAGN 272 >gi|320334506|ref|YP_004171217.1| polar amino acid ABC transporter inner membrane subunit [Deinococcus maricopensis DSM 21211] gi|319755795|gb|ADV67552.1| polar amino acid ABC transporter, inner membrane subunit [Deinococcus maricopensis DSM 21211] Length = 404 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 53/153 (34%), Positives = 89/153 (58%), Gaps = 10/153 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ +FRG P + +F F +P++ F A+I++L L AY++EI+R+ I ++P+G Sbjct: 233 YIELFRGLPFITVIFWFFIFVPYVLGEGTQFWAVILALALFTGAYVAEIVRAGIRALPRG 292 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ---- 176 Q +A+ A+GL+ T+ +ILPQ + PL +FIS+ K TS+ S I + E+ Sbjct: 293 QDEAARALGLSGTHTMLSVILPQALRNMIPPLVGQFISLFKDTSLVSIIGLIELAGAARI 352 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYII 209 T R+V+ T++ IY +A +Y I F Y + Sbjct: 353 TGNRVVTATFE---IYLTVAVLYFI---FAYAL 379 >gi|299066292|emb|CBJ37476.1| putative Glutamine transport system permease (glnP) abc transporter family [Ralstonia solanacearum CMR15] Length = 248 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 75/132 (56%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV R TP L+QL +F+GLP +G+ + + A ++++ +N AYI+EI+R+ I P+G Sbjct: 60 YVEAIRNTPFLIQLMFVFFGLPSLGLQINEWQAALLTVVVNLGAYITEIVRAGIQETPRG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+ ++R RH++L + LSS+ + ++ TSV S I ++ A Sbjct: 120 QLEAASALAMSRWACFRHVVLRPALQKVWPALSSQIVIVMLGTSVVSQIAAQDLTFAANF 179 Query: 181 IVSTTYQPLIIY 192 I S ++ Y Sbjct: 180 IQSRNFRAFETY 191 >gi|254523655|ref|ZP_05135710.1| ABC transporter, nucleotide binding/ATPase protein [Stenotrophomonas sp. SKA14] gi|219721246|gb|EED39771.1| ABC transporter, nucleotide binding/ATPase protein [Stenotrophomonas sp. SKA14] Length = 581 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 112/211 (53%), Gaps = 26/211 (12%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF----------VIFYGLPHIGIV 87 +G +A+ R+ S ++S + YVW+FR PLLV L I G+P GI Sbjct: 90 LGTLLALARVSGS-PLLSAVSWGYVWLFRSIPLLVLLLLLNNLGYLYSTIELGVPFTGIS 148 Query: 88 FDS---------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 S F A ++ LTLN +A+ +E+IR I+S+ GQ++A+ A+GL R + +R Sbjct: 149 LFSYPTTQLIGVFTAAVLGLTLNQAAFSAEVIRGGILSVDHGQYEAAAALGLPRGRQVRR 208 Query: 139 IILPQTITTSAVPLS-SEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCEL 195 IILPQ + S +P + ++ I + KSTSV + +PE+F T Q I + PL++ + Sbjct: 209 IILPQAM-RSILPAAFNDVIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVVPLLMVATV 267 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 YL++ + ++Q ++E + ++ Sbjct: 268 --WYLVILTVLSLLQRRVEQRFARGQLQRER 296 >gi|171741001|ref|ZP_02916808.1| hypothetical protein BIFDEN_00063 [Bifidobacterium dentium ATCC 27678] gi|283455610|ref|YP_003360174.1| glutamine transporter permease glnP [Bifidobacterium dentium Bd1] gi|306823352|ref|ZP_07456727.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium dentium ATCC 27679] gi|309802737|ref|ZP_07696841.1| ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] gi|171276615|gb|EDT44276.1| hypothetical protein BIFDEN_00063 [Bifidobacterium dentium ATCC 27678] gi|283102244|gb|ADB09350.1| glnP2 Glutamine transport system permease protein glnP [Bifidobacterium dentium Bd1] gi|304553059|gb|EFM40971.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium dentium ATCC 27679] gi|308220801|gb|EFO77109.1| ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] Length = 218 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 103/183 (56%), Gaps = 7/183 (3%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I+ +++ +G A + I ++ I+ Y+ + R TPLLVQL+ +++GLP Sbjct: 20 MTLFISVFGIALAIAVGLVCAGVEIA-RIPVLRQIVRVYIELSRNTPLLVQLYFLYFGLP 78 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 +G+V+ + I+ L +Y++E +R + +IP Q +++Y +G QT+ +++P Sbjct: 79 KLGVVWSAEQCAIVGLGFLGGSYMAEAMRGGLETIPNVQRESAYVLGFNTWQTLSRVVIP 138 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS---TTYQPLIIYCELAFVY 199 Q ++TS + + I ++K +SV S I + ++ A+ ++ +TY+ L + L Y Sbjct: 139 QAVSTSIPGVVANVIFLIKESSVVSAIALADVMYMAKDLIGMYYSTYESLFM---LVVAY 195 Query: 200 LIL 202 LI+ Sbjct: 196 LII 198 >gi|171321440|ref|ZP_02910388.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171093286|gb|EDT38486.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 229 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 12/219 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +I F LL+A V T+ +A +S SLI+G A ++ ++ ++ I FY + R Sbjct: 1 MIFQGFGPLLWAGTVETVKLAVLSLAASLILGLVGATAKLS-TNRVLRWIGTFYTTLIRA 59 Query: 68 TPLLVQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 P LV + ++FYG+ +G I D FVA +I+L + AY +E R + ++ Sbjct: 60 VPDLVLMLLLFYGIQILLNMATDALGWDQIDIDPFVAGVITLGFIYGAYFTETFRGAFLA 119 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ +A +A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + Sbjct: 120 VPRGQLEAGFAYGMSGWRVFHRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVK 179 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +Q +T +YL +T+ ++ +E Sbjct: 180 ASQDAGKSTLDFFFFTLAAGAIYLAITTVSNVVLHHLEK 218 >gi|288936956|ref|YP_003441015.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|288891665|gb|ADC59983.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] Length = 253 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/225 (24%), Positives = 121/225 (53%), Gaps = 7/225 (3%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L++ +P ++ TL ++ ++ + + +G + + R+ +S + ++++ RG Sbjct: 15 LLMGQYPDGPLGGVLCTLLVSLLAVLFAFPVGVLLCLARLS-PWRWLSWPVTCWIYLLRG 73 Query: 68 TPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PL++ +F ++ +P IG F ++ +L + SAYI+EI+R I ++P GQ++AS Sbjct: 74 IPLMMVVFWTYFCVPLLIGHNISGFSTMLCTLVIYESAYIAEIVRGGIQALPSGQYEASR 133 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G+ + +R +ILPQ + + L S+ +SI+K +++ I +PE+ A ++ + Sbjct: 134 ALGMGHVRALRLVILPQALYNALPSLVSQLVSIIKDSTLGYVINVPELTYAANQVSNQLL 193 Query: 187 -QPLIIYCELAFVYLI----LTSFCYIIQIKIESSVTQHTYSVDK 226 +P ++ +A Y I LT ++++I S + ++ K Sbjct: 194 TKPFQVFAIVALSYYIINFSLTWLANRLELRIASRRQRAQSAMGK 238 >gi|123443207|ref|YP_001007181.1| putative glutamate/aspartate transport system permease [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090168|emb|CAL13031.1| putative glutamate/aspartate transport system permease [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 246 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 115/214 (53%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ ++VI+ +G ++R + I+S I YV +FR PL+VQ F Sbjct: 25 IWSGFQVTVALSLCAWVIAFFVGSLFGILRTV-PNRILSSIGACYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPHI-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P + G+ F S F++ ++ L L +A + E +R+ I S+P+GQ Sbjct: 84 WYLVVPELLPADLGMWFKSELDPNIQFFLSSMMCLGLFTAARVCEQVRAGIQSLPRGQKA 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 204 YSAHAYESFTAITLGYVLINAVIMLLMRLVEKKV 237 >gi|256825960|ref|YP_003149920.1| amino acid ABC transporter membrane protein [Kytococcus sedentarius DSM 20547] gi|256689353|gb|ACV07155.1| amino acid ABC transporter membrane protein [Kytococcus sedentarius DSM 20547] Length = 245 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/221 (25%), Positives = 116/221 (52%), Gaps = 19/221 (8%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 +D F + + +++ A + FV+++++G + + + +I+ F FRGT Sbjct: 16 VDGF----WVTVQLSVGGALVGFVVAVVLGIAASTGTAWLTGPA-RVIIEF----FRGTS 66 Query: 70 LLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 L+VQLF IFY +P + G S I++ LN+ AY +E++R S+ ++PKGQW+ + A+ Sbjct: 67 LVVQLFFIFYVIPTVTGYDIGSLGTGILAFGLNYGAYGAEVVRGSLKAVPKGQWETTTAL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST--TY 186 ++ +R +I PQ L++ + ++K T++AS I + +I + A R T TY Sbjct: 127 SMSYPTALRRVIWPQAWALMLPGLNNLAVMLVKGTALASLILLTDITEVADRARRTMSTY 186 Query: 187 QPL----IIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + ++Y +A + ++F ++++ + + + Sbjct: 187 EAFGVAAVLYLAIALAF---SAFLRWLEVRAHRKLGRGKRA 224 >gi|167587517|ref|ZP_02379905.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Burkholderia ubonensis Bu] Length = 255 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 125/228 (54%), Gaps = 21/228 (9%) Query: 9 IIDS-FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 ++D+ P+LL AA+ TL + +S S+++G +A+ ++ ++ + RG Sbjct: 8 LLDTVMPKLL-AAVPTTLALTLLSGAASVLLGVPLALA-AGARHALLRWSARGWLMLIRG 65 Query: 68 TPLLVQLFVIFYGLPHI------------GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 TPLLVQL++++YG I ++ D+F I++L++N S Y++ I+R +I Sbjct: 66 TPLLVQLYLLYYGFGQIVPREWMRDSWASPLLRDAFWYAIVALSVNESTYVATILRGAIA 125 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +P G+ +A +A G+TR Q +R I+ P+ + L+ E I +LKST +AST+T+ ++ Sbjct: 126 GVPAGEIEAGHAYGMTRVQVLRRIVGPRAWRLALPALTGEAILLLKSTVLASTVTVFDVL 185 Query: 176 QTAQRIVSTT---YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 TA + T Y+PL A VY+ L + I ++E V ++ Sbjct: 186 GTANTLRFETLRVYEPL---AGAAIVYVALVALLTIPAARLEKRVNRY 230 >gi|307130766|ref|YP_003882782.1| arginine ABC transporter membrane protein [Dickeya dadantii 3937] gi|306528295|gb|ADM98225.1| arginine transporter subunit; membrane component of ABC superfamily [Dickeya dadantii 3937] Length = 223 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 12/175 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNF 102 I S I Y+ +F GTPLLVQ+F+I+YG ++ ++ + +L LN Sbjct: 43 IASQIAKGYITLFTGTPLLVQIFLIYYGPGQFAAIRQIDWLWNLLSQPWLCAVSALALNS 102 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +++ ++ +IP GQW + A+G+ ++QT+R I+LP + S+E + + K Sbjct: 103 AAYTTQLFYGAVRAIPDGQWQSCAALGMNQRQTLR-ILLPFAFKRALSSYSNEVVLVFKG 161 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 TS+A TIT+ E+ Q + TY ++++ VYL + ++ +E Sbjct: 162 TSLAYTITLMEVMGYGQLLYGRTYD-VLVFGAAGIVYLCVNGLLTLLMRLVERRA 215 >gi|298717478|ref|YP_003730120.1| ABC transport system permease [Pantoea vagans C9-1] gi|298361667|gb|ADI78448.1| Putative ABC transport system, permease protein [Pantoea vagans C9-1] Length = 229 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 109/210 (51%), Gaps = 22/210 (10%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGTPL 70 P+LL A LP+ +++I+GFF+A+I FF +IS + YV R P+ Sbjct: 3 PELLSA-----LPLTLGIMFVAMIVGFFLALIATFFRVRRIPVISQLADLYVSYARSVPV 57 Query: 71 LVQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 ++QLFV FYG+P ++ D+F VA +I L+L Y+SE++R + +++ +GQ Sbjct: 58 VLQLFVAFYGMP---LITDNFGFSDFFTANVAAMIGLSLYHGGYLSEVMRPAYLAVERGQ 114 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 DA+ ++G + +Q + +I PQ + + + I ++ + ++ I ++ TA I Sbjct: 115 HDATDSLGYSFRQKMLRVIGPQAVHFALPGYGNAIIYLIHNVALVMYIGAADVMATAHLI 174 Query: 182 VSTTYQ--PLIIYCELAFVYLILTSFCYII 209 + Y Y LA +Y +L +++ Sbjct: 175 MERDYNQYQFGTYLVLAVLYSLLCGVAWLV 204 >gi|296271505|ref|YP_003654137.1| polar amino acid ABC transporter inner membrane subunit [Thermobispora bispora DSM 43833] gi|296094292|gb|ADG90244.1| polar amino acid ABC transporter, inner membrane subunit [Thermobispora bispora DSM 43833] Length = 290 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 97/175 (55%), Gaps = 10/175 (5%) Query: 36 LIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVIFYGLPHI---GIVFDS 90 L++G +A++R S L + Y IFRG P ++ ++++ +G+P + G D Sbjct: 95 LVLGLAVALVRSLRSPVFFPLRAVAVLYTDIFRGIPTILLVYLVGFGIPALQLQGAPTDP 154 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 II+L L++ AY++E+ RS I SI Q A+ ++GLT QT+RH++LPQ I Sbjct: 155 VTLGIIALVLSYGAYVAEVFRSGIESIHPSQRAAARSLGLTHGQTMRHVVLPQAIRRVIP 214 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVST--TYQPLIIYCELAFVYLILT 203 PL ++F S+ K +++ + + E + AQ ++ Y P Y A ++++LT Sbjct: 215 PLLNDFASLQKDSALVAVLGPLEALRQAQIHTASMFNYTP---YLASALLFIVLT 266 >gi|27382710|ref|NP_774239.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27355882|dbj|BAC52864.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 243 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 114/224 (50%), Gaps = 23/224 (10%) Query: 1 MKYEW-FNLIIDSFP-------QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT 52 M Y W + + + P +L + +V+TL A ++++I+L+ G + V+R S Sbjct: 1 MNYHWNWGIFFEPNPMGTGTYLDMLLSGLVLTLKTAVLAWIIALVFGSLVGVMRTLPSKA 60 Query: 53 IISLIMHFYVWI--FRGTPLLVQLFVIFYGLPHI-----GIVFDS-----FVAIIISLTL 100 + W+ FR PLLVQLF+ F+ LP + G+ F I + Sbjct: 61 AYRF---GFCWVEFFRNMPLLVQLFLWFFVLPELLPKSAGLWLKQLPNAPFWTAAIGIGF 117 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 SA ++ +++ I S+P+GQ A+ A+GLT Q R+++LP PL+SEF++ + Sbjct: 118 FMSARVAVQLQAGIGSLPRGQKMAATALGLTTVQGYRYVLLPMAFRIILPPLTSEFLNTI 177 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 K+T+VA TI + E+ A+ + ++Q + +YL++ + Sbjct: 178 KNTAVAITIGLIELTGQARSMQEFSFQVFEAFTAATILYLLVNA 221 >gi|90418081|ref|ZP_01225993.1| permease protein, ABC-type amino acid transporter [Aurantimonas manganoxydans SI85-9A1] gi|90337753|gb|EAS51404.1| permease protein, ABC-type amino acid transporter [Aurantimonas manganoxydans SI85-9A1] Length = 236 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 16/200 (8%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG- 80 +VT+ +A + I L+ GF +++ + D +SL + Y IFRG P L+ LFV+++G Sbjct: 24 LVTVSLALATLPIGLVFGFLLSLAKQS-DDRYLSLSANIYTTIFRGLPELLTLFVVYFGA 82 Query: 81 ------------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 LP I SFV+ +I+L FSA+ SE+ S+ +IP GQ + + A+ Sbjct: 83 NGLLRSITQSTGLPDI--ALSSFVSGMIALGFVFSAFASEVFLSAFRAIPHGQREGAAAL 140 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL + + +ILPQ I + L++ ++++LK T++ S I + +I + T +P Sbjct: 141 GLGPARIMILVILPQIIRIALPGLANLWMNLLKDTALVSVIGLADIMRQTGIAARVTREP 200 Query: 189 LIIYCELAFVYLILTSFCYI 208 + +YL+LT I Sbjct: 201 FYFFGVAIVLYLVLTMLSSI 220 >gi|110347319|ref|YP_666136.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110287495|gb|ABG65553.1| amino acid ABC transporter membrane protein 2, PAAT family [Chelativorans sp. BNC1] Length = 232 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/224 (26%), Positives = 121/224 (54%), Gaps = 13/224 (5%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH---FY 61 W L+ S+P +TL IA +S V++ +A+ R + + ++ H + Sbjct: 9 WPYLLFGSYPNGPLGGFTMTLVIAIVSLVLTFPSAVLVALAR----TSEVRVLEHAAFLF 64 Query: 62 VWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V I RG PLL+ +F +++ LP +G F ++I+++ + +AY+SE++R++I ++PKG Sbjct: 65 VTIVRGIPLLMLIFWVYFFLPVALGTPISPFWSLILAIVVFQTAYLSEVLRAAIEALPKG 124 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++GL+ I + LPQ + S + ++F S++K TS+ + + E+ A + Sbjct: 125 QTEAALSLGLSYFPRIWKVTLPQALYNSIPGILNQFTSMIKETSLGYVLAVEELTYAANK 184 Query: 181 IVS-TTYQPLIIYCELAFVY----LILTSFCYIIQIKIESSVTQ 219 + + +P ++ LA Y LT +++ +IE+ T+ Sbjct: 185 VNNFILVKPFSVFALLALTYFAVCFTLTQLVRLLEARIENRFTR 228 >gi|325125052|gb|ADY84382.1| Glutamine ABC transporter membrane spanning permease [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 219 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 50/140 (35%), Positives = 76/140 (54%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 +F +IS IM YV + R TPLL+QLF ++Y P IGI + V II L AY++ Sbjct: 43 YFKIPVISQIMTAYVELARNTPLLIQLFFLYYAFPVIGIKMSAEVCGIIGLIFLGGAYMA 102 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E I Q ++ A+G++R Q R+++ PQ S L++ I ++K TS+ S Sbjct: 103 EGFTGGFNGISTSQINSGKALGMSRFQLARYVVFPQGFALSLPALTANIIFLIKETSIFS 162 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I IPE+ TA ++ Y+ Sbjct: 163 VIAIPELTNTALDLIGMYYR 182 >gi|322391022|ref|ZP_08064526.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 903] gi|321142252|gb|EFX37726.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 903] Length = 266 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 66/232 (28%), Positives = 118/232 (50%), Gaps = 27/232 (11%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY------V 62 ++D+FP A++ LP+ + +++L FF V + F+ I+ + Y V Sbjct: 30 VLDAFP-----AVIGKLPV---TILLALGGAFFGIVFAMIFALVKINRVRILYPIQAVFV 81 Query: 63 WIFRGTPLLVQLFVIFYGLPHI--------GIVFD-----SFVAIIISLTLNFSAYISEI 109 RGTPLLVQL + +YG+P I G F+ + + I++L N +AY SE Sbjct: 82 SFLRGTPLLVQLMLTYYGIPLILKAINQSYGTAFNINAIPAELFAIVALAFNEAAYASET 141 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IR++I+S+ G+ +A+ ++G+T +Q R II+P + L + I + K TS+A + Sbjct: 142 IRAAILSVDPGEIEAARSLGMTNRQVYRRIIIPNAAVVATPTLINSLIGLTKGTSLAFSA 201 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 ++ EIF A+ + + + + ++ VY I+ I+ IE + T Sbjct: 202 SVVEIFAQARIVGGSDLKYFERFITVSIVYWIVNILIEILGRHIERRLDIET 253 >gi|296532450|ref|ZP_06895174.1| ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296267225|gb|EFH13126.1| ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 226 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 85/156 (54%) Query: 49 FSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISE 108 + + YV I RG P+LV + +YGL GI +F A +I+LT +A+++E Sbjct: 53 YGGAFARFLARLYVDILRGIPVLVLILFTYYGLALFGINVPAFWAGVIALTAFATAHVAE 112 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 +R ++ S+P GQ +A+ AIGL Q + +++LPQ + P + + ++K T++ S Sbjct: 113 TLRGAVESVPAGQMEAAKAIGLRFPQRLAYVVLPQALRRMLPPWVNTGLEVVKGTTLLSV 172 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 I + E+ +Q++++ Y + Y YL++ + Sbjct: 173 IGVVELLLASQQVMARNYLIIDFYLTAGLFYLVINA 208 >gi|104773436|ref|YP_618416.1| amino acid ABC transporter permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422517|emb|CAI97091.1| Amino Acid ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 219 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 50/140 (35%), Positives = 76/140 (54%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 +F +IS IM YV + R TPLL+QLF ++Y P IGI + V II L AY++ Sbjct: 43 YFKIPVISQIMTAYVELARNTPLLIQLFFLYYAFPVIGIKMSAEVCGIIGLIFLGGAYMA 102 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E I Q ++ A+G++R Q R+++ PQ S L++ I ++K TS+ S Sbjct: 103 EGFTGGFNGISTSQINSGKALGMSRFQLARYVVFPQGFALSLPALTANIIFLIKETSIFS 162 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I IPE+ TA ++ Y+ Sbjct: 163 VIAIPELTNTALDLIGMYYR 182 >gi|227529781|ref|ZP_03959830.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] gi|227350265|gb|EEJ40556.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] Length = 486 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 98/180 (54%), Gaps = 2/180 (1%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L + +T+ + + + ++I G + V+ + ++ + I ++IFRG P++V Sbjct: 283 EALLRGLWMTIELTVVGIIFAMIFGVILGVLGVV-NNKFANGISSTLIYIFRGIPMIVLA 341 Query: 75 FVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 F I+ G+P+ IG F+A I++LTL+ AYI I++ S+ +GQW+A+ ++GL Sbjct: 342 FFIYMGVPNVIGHKVPLFLAGILTLTLDEGAYIGAIVKGGFESVSQGQWEAARSLGLPYS 401 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + + +I PQ L ++FI LK TS+ S I + E+ QT I+S + ++ Sbjct: 402 KALIKVIAPQGFKLMVPSLVNQFIITLKDTSILSAIGVMELTQTGTVIISQNMEGFRMWT 461 >gi|282862286|ref|ZP_06271348.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] gi|282562625|gb|EFB68165.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] Length = 215 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 62/202 (30%), Positives = 114/202 (56%), Gaps = 11/202 (5%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI-- 64 N+++D+FP+ + T+ I +S VI+L++G IA R+ + L + W+ Sbjct: 2 NVLLDNFPEF-RDGFIGTVSITVVSSVIALVLGVLIAGFRV---SPVPPLRVFGTAWVTL 57 Query: 65 FRGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 R TPL + + F+ +P I G+ F+ ++L L S+++ E +RS I ++P GQ Sbjct: 58 LRNTPLTLLFLIFFFVVPEILFPGM--SPFLLGSLALGLYTSSFVCEAVRSGINTVPLGQ 115 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ +IG+T QT+R +ILPQ T PLSS FI++ K++++A ++ E+F + + Sbjct: 116 AEAARSIGMTFAQTLRMVILPQATRTVIPPLSSIFIALTKNSAIAGAFSVTELFGWQKLM 175 Query: 182 VSTTYQPLIIYCELAFVYLILT 203 Y + ++ +A YL++T Sbjct: 176 SDRGYDIVPVFIWVALGYLVVT 197 >gi|218437715|ref|YP_002376044.1| polar amino acid ABC transporter inner membrane protein [Cyanothece sp. PCC 7424] gi|218170443|gb|ACK69176.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7424] Length = 402 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 117/219 (53%), Gaps = 7/219 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L +D P L + +++TL +A +S V+S G +A+ R S +I + Y+ + R Sbjct: 185 GLFLDLVPLSLISGLILTLSVAIVSIVLSFPFGVLLALGRQS-SLPVIRWLSIAYIELIR 243 Query: 67 GTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 G PL+ LF+ LP +G+ DS V I TL +AY++E +R + S+P+GQ + Sbjct: 244 GFPLIGILFMAQVMLPLVLPLGVRPDSIVRAIAGFTLFSAAYLAENVRGGLQSVPRGQTE 303 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GL + I+LPQ + L +FIS+ K TS+ + + + ++ +Q I++ Sbjct: 304 AAKALGLNPLLVLSLIVLPQALKAVIPTLVGQFISLFKDTSLLAIVGLVDLLGISQSILA 363 Query: 184 T-TYQP--LIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 YQ + +Y + F+Y + S + KIE+ ++Q Sbjct: 364 NPKYQGRNVEVYLFIGFMYWLCCSAMSLASRKIETKMSQ 402 >gi|183598118|ref|ZP_02959611.1| hypothetical protein PROSTU_01483 [Providencia stuartii ATCC 25827] gi|188020277|gb|EDU58317.1| hypothetical protein PROSTU_01483 [Providencia stuartii ATCC 25827] Length = 246 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 104/180 (57%), Gaps = 14/180 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + VT+ ++ +++I+ ++G F ++R + +++I YV +FR PL+VQ F Sbjct: 25 LLSGLEVTVALSICAWIIAFLVGSFFGILRTV-PNRFLAMIGTVYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG F F++ + L L +A ++E +R++I S+P+GQ + Sbjct: 84 WYLVIPELLPRSIGDWFKMDLDPNYQFFISSTLCLGLFTAARMTEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVILPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 >gi|115359034|ref|YP_776172.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria AMMD] gi|115284322|gb|ABI89838.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia ambifaria AMMD] Length = 225 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 103/201 (51%), Gaps = 14/201 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI---F 65 I+ ++ + A +VTL +A + + +++G A ++ + + + H + Sbjct: 3 ILVNYGAQIAAGALVTLELAVAALCVGMLLGIAGASAKL----SSLGWLRHATYALTNFL 58 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDS------FVAIIISLTLNFSAYISEIIRSSIISIP 118 RG P + L + ++GL H+ FD F A +I+L + F AY SE+ R + I++P Sbjct: 59 RGIPEFLILLICYFGLSHLLNAQFDGAFVISPFSAGVIALAVVFGAYSSEMFRGAFIAVP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +A+ A G+TR QT+ H+ LPQ L++ + ++LK TS+ S + + ++ + A Sbjct: 119 AGQIEAARAYGMTRLQTLWHVRLPQAWRICLPSLNNMWQNLLKDTSLVSIVGLEDMLRKA 178 Query: 179 QRIVSTTYQPLIIYCELAFVY 199 T QP + Y + VY Sbjct: 179 NIAAQFTKQPFVFYVTVGIVY 199 >gi|328462014|gb|EGF34198.1| glutamine ABC transporter permease [Lactobacillus helveticus MTCC 5463] Length = 175 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 86/149 (57%) Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 ++ Y+ IFR PLLV + + + +P + F A I LTL SA+I+E +R+ I Sbjct: 11 KIVAKVYIAIFRNIPLLVIVMIFYLIVPRYIVKLSGFQAGTIGLTLYTSAFIAETVRAGI 70 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 SI GQ + + + G+T Q +R++ILPQ + PL ++F++++K++SV + + ++ Sbjct: 71 SSISTGQMEGARSNGMTYTQAMRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGFDL 130 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 AQ I +T++ + Y + YLILT Sbjct: 131 MYQAQLIAFSTFRTIDTYVVVGLFYLILT 159 >gi|319776579|ref|YP_004139067.1| arginine transporter subunit [Haemophilus influenzae F3047] gi|329124093|ref|ZP_08252640.1| arginine ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus aegyptius ATCC 11116] gi|317451170|emb|CBY87403.1| arginine transporter subunit [Haemophilus influenzae F3047] gi|327467518|gb|EGF13016.1| arginine ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus aegyptius ATCC 11116] Length = 227 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/177 (32%), Positives = 99/177 (55%), Gaps = 10/177 (5%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS---------LTL 100 + I ++ Y+ +F GTPLLVQ F+I+ G + DS + +S L L Sbjct: 41 ENKWIKSAVNLYLTLFTGTPLLVQFFLIYAGPGQFQWIIDSPLWFFLSNAWFCAALALAL 100 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N +AY +++ ++ +I KGQW++ A+GL+R QT++ I++P + + S+E I + Sbjct: 101 NSAAYSTQLFHGAVKAIHKGQWESCAALGLSRLQTLK-ILIPYALKRALPSYSNEIILVF 159 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 K T++ASTITI +I A+++ T Y + IY +YLI+T ++ K+E V Sbjct: 160 KGTALASTITIMDIMGYARQLYGTEYDAITIYGIAGGIYLIITGIATLLLRKLEKKV 216 >gi|311695923|gb|ADP98796.1| amino acid ABC transporter, inner membrane subunit [marine bacterium HP15] Length = 247 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 105/208 (50%), Gaps = 20/208 (9%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P L+ AIV T+ +A +S +S+ +G A ++ S + I Y + RG P LV Sbjct: 22 PALMDGAIV-TIELAFLSLALSVALGLIGASAKLSQS-RVAKGIATTYTTLIRGVPDLVM 79 Query: 74 LFVIFYGLPHIGIV-----------------FDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + + +YG + + FD F++ ++++ L F AY++E R + ++ Sbjct: 80 MLLFYYG-GQVAVNMLSDYIWEAYEIDFFFQFDPFISGVVTIGLIFGAYMTETFRGAFLA 138 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + GQ +A+ A G TR T R I+LPQ + + L + + +LK+T++ S I + ++ + Sbjct: 139 VETGQIEAARAYGFTRFHTFRRIMLPQMMRHALPGLGNNWQVLLKTTALVSIIGLTDMVR 198 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTS 204 A+ P + +AFVYL LT+ Sbjct: 199 VAEEAAKAERMPFHFFIPVAFVYLALTA 226 >gi|116513422|ref|YP_812328.1| ABC-type amino acid transport system, permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|260101517|ref|ZP_05751754.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus helveticus DSM 20075] gi|116092737|gb|ABJ57890.1| amino acid ABC transporter membrane protein 1, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|260084660|gb|EEW68780.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus helveticus DSM 20075] gi|323466466|gb|ADX70153.1| ABC-type amino acid transport system, permease component [Lactobacillus helveticus H10] gi|325686264|gb|EGD28306.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 219 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 50/140 (35%), Positives = 76/140 (54%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 +F +IS IM YV + R TPLL+QLF ++Y P IGI + V II L AY++ Sbjct: 43 YFKIPVISQIMTAYVELARNTPLLIQLFFLYYAFPVIGIKMSAEVCGIIGLIFLGGAYMA 102 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E I Q ++ A+G++R Q R+++ PQ S L++ I ++K TS+ S Sbjct: 103 EGFTGGFNGISTSQINSGKALGMSRFQLARYVVFPQGFALSLPALTANIIFLIKETSIFS 162 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I IPE+ TA ++ Y+ Sbjct: 163 VIAIPELTNTALDLIGMYYR 182 >gi|89053402|ref|YP_508853.1| amino acid ABC transporter permease [Jannaschia sp. CCS1] gi|88862951|gb|ABD53828.1| amino acid ABC transporter membrane protein, PAAT family [Jannaschia sp. CCS1] Length = 265 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/221 (25%), Positives = 113/221 (51%), Gaps = 19/221 (8%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + +T+ + + F ++ ++G +A++ + I I FY+ + RG P++V L Sbjct: 42 LRRGVWITVIVTLVGFAMASLMGLGLALMSLS-RRLIPRQIARFYIEVVRGVPIIVLLLY 100 Query: 77 IFY---------------GLPHIGIVFDSFVAI---IISLTLNFSAYISEIIRSSIISIP 118 I + L G+ F + +I+L + +SA+I+E+ R+ + S+ Sbjct: 101 IAFVFAPGLVAAYNWVAEALGMEGVRTRDFPLLWRAVIALAIGYSAFIAEVFRAGLQSVD 160 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +A+ A+GL R RHII PQ I T PL ++F++++K +S+ S + + ++ Q Sbjct: 161 PGQIEAANALGLNRWNRFRHIIFPQAIRTILPPLGNDFVAMVKDSSLVSVLGVLDVTQLG 220 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + ++ ++ Y +A +YL +T I+ ++E + Q Sbjct: 221 KVTAASNFRYFETYNVVALIYLTITVTLSILLRRMEKRMRQ 261 >gi|297564130|ref|YP_003683103.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848579|gb|ADH70597.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 212 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/216 (26%), Positives = 113/216 (52%), Gaps = 12/216 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR-IFFSDTIISLIMHF 60 +EW + P LL + VT+ I + ++I+L++G IA+ R F ++ +M F Sbjct: 4 DFEW---TFEVMPDLL-GGLWVTVQITVLGYLIALVLGLAIAIARRTPFFGPVLHAVMEF 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 R TPL++QL +F P + ++ + ++++AY +E+ RS I + KG Sbjct: 60 ----IRTTPLIIQLVFVFLLTPAD---ISAMTVGVVVIGVHYAAYTAEVYRSGIEGVAKG 112 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW+A+ A+ L +T I+LPQ I + L + I++ K T + I++PE+ AQ+ Sbjct: 113 QWEAARALSLPASRTWGAIVLPQAIRRTIPALGNYLIAMFKDTPLLLAISVPELLTEAQQ 172 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 + S ++ + Y + ++L+++ I+ ++E Sbjct: 173 VGSADFRIVEAYTLVGILFLLVSIPSAILIRRLERR 208 >gi|149908406|ref|ZP_01897069.1| amino acid ABC transporter, permease protein [Moritella sp. PE36] gi|149808569|gb|EDM68504.1| amino acid ABC transporter, permease protein [Moritella sp. PE36] Length = 370 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 7/224 (3%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 WF L + + + +++T+ +A + + S IG +A+ R + I+ + ++ Sbjct: 150 WFGLEVVGTEK--WGGLMLTILVAAVGIIASFPIGILLALGRQSDNMPIVKFLCIGFIEF 207 Query: 65 FRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 RG PL+ LF+ LP GI FD + +I +TL +AYI+E+IR + +IPKGQ Sbjct: 208 IRGVPLITILFMASVVLPLFFSDGIDFDKLLRALIGITLFQAAYIAEVIRGGLQAIPKGQ 267 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++AS ++GLT Q + IILPQ + S L FIS+ K T++ I + +I Sbjct: 268 YEASESLGLTYWQGMILIILPQALKISIPNLVGSFISLFKDTTLVLIIGLFDILAMVTLT 327 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 S T FV +I FC+ + S V + Y+ D Sbjct: 328 NSDTNWLGFEIEGYVFVTMIYWVFCF--SMSQYSRVIERRYNTD 369 >gi|183602519|ref|ZP_02963884.1| permease protein of ABC transporter system [Bifidobacterium animalis subsp. lactis HN019] gi|219683563|ref|YP_002469946.1| permease protein of ABC transporter system [Bifidobacterium animalis subsp. lactis AD011] gi|241190593|ref|YP_002967987.1| ABC transporter permease [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195999|ref|YP_002969554.1| ABC transporter permease [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218160|gb|EDT88806.1| permease protein of ABC transporter system [Bifidobacterium animalis subsp. lactis HN019] gi|219621213|gb|ACL29370.1| permease protein of ABC transporter system [Bifidobacterium animalis subsp. lactis AD011] gi|240248985|gb|ACS45925.1| permease protein of ABC transporter system [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250553|gb|ACS47492.1| permease protein of ABC transporter system [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793580|gb|ADG33115.1| permease protein of ABC transporter system [Bifidobacterium animalis subsp. lactis V9] Length = 328 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 24/187 (12%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-----PHIGI----------------VFD 89 + ++ + FY+W FRGTP+ QL +F+GL P + + + Sbjct: 99 NPVLRGVSWFYIWFFRGTPVYTQL--VFWGLFAVLIPRLSLGIPLTSVEFWSIDSQAIIT 156 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 +F A I L LN +AY++EI+R+ + ++ GQ +A+ A+G+ R +R +ILPQ + Sbjct: 157 AFNAAWIGLALNEAAYLAEIVRAGLDAVDPGQEEAAKALGMKRSMIMRRVILPQAMRIII 216 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTA-QRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 P +E I +LK+TS+ + Q A I + Y+P+ + + YL +TS + Sbjct: 217 PPTGNETIGMLKTTSLVLAVPFTLDLQYATNAIANRIYKPIPLLLVASIWYLFITSILMV 276 Query: 209 IQIKIES 215 IQ +E Sbjct: 277 IQSMLEK 283 >gi|62179450|ref|YP_215867.1| arginine transporter permease subunit ArtM [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127083|gb|AAX64786.1| ABC superfamily (membrane), arginine 3rd transport system [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] Length = 222 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 120/218 (55%), Gaps = 14/218 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +++ P+LL + +L + S ++L++ +I + ++ L+ Y+ +F GT Sbjct: 1 MLEYLPELL-KGLHTSLTLTVASIAVALVLALVFTIILTLKTPFVVWLV-RGYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLLVQ+F+I+YG P + ++ + ++ +I+L+LN +AY +++ +I +IP Sbjct: 59 PLLVQIFLIYYGPGQFPTLQEYPLLWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ + A+G+++K T+ I+LP + S+E + + KSTS+A TIT+ E+ + Sbjct: 119 EGQCQSCGALGMSKKDTL-AILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYS 177 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 Q + TY ++++ +YL++ ++ IE Sbjct: 178 QLLYGRTYD-VVVFGAAGVIYLVVNGLLTLMMRLIERK 214 >gi|225386718|ref|ZP_03756482.1| hypothetical protein CLOSTASPAR_00466 [Clostridium asparagiforme DSM 15981] gi|225047196|gb|EEG57442.1| hypothetical protein CLOSTASPAR_00466 [Clostridium asparagiforme DSM 15981] Length = 235 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 45/111 (40%), Positives = 75/111 (67%), Gaps = 1/111 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV F+ TPL+VQ+F + LP+ IG F+ ++ + + AYISE+IR+ I ++PK Sbjct: 65 YVEFFQNTPLVVQVFFYYNCLPYVIGGRVPKFMLGVLGVGIYHGAYISEVIRTGIEAVPK 124 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 GQ++A+Y+ G T QT+R+IILPQTI L+++ ++++K+TSV + + Sbjct: 125 GQFEAAYSQGFTYLQTMRYIILPQTIKLIMPSLANQALNLVKNTSVLAMVA 175 >gi|260904717|ref|ZP_05913039.1| polar amino acid ABC transporter, inner membrane subunit [Brevibacterium linens BL2] Length = 220 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 97/167 (58%), Gaps = 9/167 (5%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQ 73 ++ + I T+ + ++ + +L++G +A +R+ S T ++ + Y+ + R TPL + Sbjct: 8 EMFLSGIWGTVKLFTVALIGALVLGTILAGMRV--SPTPVLRIAASTYINVVRNTPLTLV 65 Query: 74 LFVIFYGLPHIGI------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 +F +GLP + I F+SF+ ++LT + +++E +RS I +IP GQ +A+ A Sbjct: 66 MFFCAFGLPFLDIRFGSTSSFNSFIYATLALTAYTACFVAETLRSGISTIPVGQAEAARA 125 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +GLT QT+ +ILPQ T PL S I++LK+TS+AS E+ Sbjct: 126 VGLTFGQTLSQVILPQAFRTVIPPLGSVIIALLKNTSIASAFNNREL 172 >gi|116617492|ref|YP_817863.1| ABC-type amino acid transport system, permease component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096339|gb|ABJ61490.1| amino acid ABC transporter membrane protein 1, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 248 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 98/168 (58%), Gaps = 10/168 (5%) Query: 33 VISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFVIFYGLP----HIGIV 87 +I +I+G IA +++ DT I I + RGTP+L+Q+F+++YGLP ++GI Sbjct: 33 IIGVIVGAGIAFVKM--EDTPIFKQIAVVFTSFIRGTPILIQMFLVYYGLPMFLGYVGIN 90 Query: 88 FDSFVAII---ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQT 144 D +I I+ LN +A++SEIIR+++ S+P Q +A+ G T++Q II PQ Sbjct: 91 TDDVSPLIYLFITYGLNMAAFLSEIIRAALESVPASQREAALTSGYTKRQMYFKIIFPQA 150 Query: 145 ITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 + + ++ IS+L+ TS+A TI + ++ A+ + + T+ + Y Sbjct: 151 VIIAVPSFATMVISLLQDTSLAFTIGVLDVVGKAKALGTATFHTVEAY 198 >gi|256375588|ref|YP_003099248.1| polar amino acid ABC transporter, inner membrane subunit [Actinosynnema mirum DSM 43827] gi|255919891|gb|ACU35402.1| polar amino acid ABC transporter, inner membrane subunit [Actinosynnema mirum DSM 43827] Length = 290 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 71/117 (60%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 F V +FR PLL+ +F+ ++GLP I I F A+++ LTL + ++E+ R+ + S+P+ Sbjct: 104 FLVEVFRAIPLLIMIFIFYFGLPTIDIKMSQFTAVVLGLTLYNGSVLAEVFRAGVASLPR 163 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 GQ +A+YA+G+ + Q + ++LPQ + + S+ + +LK T++ I E+ Sbjct: 164 GQAEAAYALGMRKTQVMTQVLLPQALRAMLPAIISQLVVLLKDTALGFIINYKELLD 220 >gi|239816392|ref|YP_002945302.1| polar amino acid ABC transporter inner membrane subunit [Variovorax paradoxus S110] gi|239802969|gb|ACS20036.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 223 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 108/193 (55%), Gaps = 3/193 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y++ F+ + ++P LL +T+ ++ ++ ++ L++ F A + + +++ Sbjct: 1 MNYQFQFDAVFAAWP-LLLKGTWITIQLSLVATLLGLVVAIFCAWGKTS-GPGWLRFVVN 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + R TP LVQLF F+ LP IG+ + A ++++ +N AY +EIIR+ I SIPK Sbjct: 59 AYIEVIRNTPFLVQLFFFFFALPAIGLRWSPQTAALVAMVVNLGAYATEIIRAGIESIPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A A+ L + R +I+ + L+S+FI ++ S++V S I+ ++ A Sbjct: 119 GQIEAGRALNLKPWEIFRFVIIKPALKAIYPALTSQFILLMLSSAVVSVISADDLTSVAA 178 Query: 180 RIVSTTYQPLIIY 192 + S T++ IY Sbjct: 179 NLQSQTFRSFEIY 191 >gi|312867877|ref|ZP_07728082.1| ABC transporter, permease protein [Streptococcus parasanguinis F0405] gi|311096632|gb|EFQ54871.1| ABC transporter, permease protein [Streptococcus parasanguinis F0405] Length = 266 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 65/226 (28%), Positives = 116/226 (51%), Gaps = 15/226 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D+FP ++ + VT+ +A +I A+++I I+ I +V RGT Sbjct: 30 VLDAFPAVI-GKLPVTILLALGGAFFGIIFAMIFALVKIN-RVRILYPIQAVFVSFLRGT 87 Query: 69 PLLVQLFVIFYGLPHI--------GIVFD-----SFVAIIISLTLNFSAYISEIIRSSII 115 PLLVQL + +YG+P I G F+ + + I++L N +AY SE IR++I+ Sbjct: 88 PLLVQLMLTYYGIPLILKAINQSYGTAFNINAIPAELFAIVALAFNEAAYASETIRAAIL 147 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ G+ +A+ ++G+T +Q R II+P + L + I + K TS+A + ++ EIF Sbjct: 148 SVDPGEIEAARSLGMTNRQVYRRIIIPNAAVVATPTLINSLIGLTKGTSLAFSASVVEIF 207 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 A+ I + + + ++ VY I+ I+ IE + T Sbjct: 208 AQARIIGGSDLKYFERFITVSIVYWIVNILIEILGRHIERRLDIET 253 >gi|296102233|ref|YP_003612379.1| amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056692|gb|ADF61430.1| amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 312 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 71/238 (29%), Positives = 123/238 (51%), Gaps = 22/238 (9%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++EW F ++ + TL + I +S+I+G +A+ R+ S + SL Y Sbjct: 40 RWEWSVFARWFFDPVILEGVGQTLLLTLIGTALSVILGGMLALARLSSSWLLSSLAWG-Y 98 Query: 62 VWIFRGTPLLVQLFVIFY----------GLPHIGIVFDSFVAI---------IISLTLNF 102 +W+FR PL+V L +++ G+P G+ + SF I ++ LTL Sbjct: 99 IWLFRSLPLIVVLIILYNFSYLYDTLSLGVPFTGMTWGSFETINVLGQFSTAVVGLTLVQ 158 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTR-KQTIRHIILPQTITTSAVPLSSEFISILK 161 SAY +EIIR + + GQ++A+ A+GL ++T+R IILPQ + T +E IS+ K Sbjct: 159 SAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTVR-IILPQALRTILPSGFNEIISLAK 217 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ + +PE+F T Q I + T + + + A YL++T+ IQ +E + + Sbjct: 218 GTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAAWYLVITTVLSAIQYGVERGLAR 275 >gi|218463669|ref|ZP_03503760.1| octopine ABC transporter, permease protein [Rhizobium etli Kim 5] Length = 199 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 86/150 (57%), Gaps = 10/150 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEII 110 YV++FRG+PLLVQ+F+I+YGL G + + +++LTLN +AY SEI Sbjct: 23 YVFVFRGSPLLVQMFLIYYGLGQFRHELQDLGLWGFFREPYWCAVLALTLNTAAYCSEIF 82 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R + ++ + +A+ A G++ R IILP I + +E I ++K+T++AS IT Sbjct: 83 RGGLQAVSVQEIEAARACGMSGVLLFRRIILPIAIRHALPAYGNEIILMIKATALASVIT 142 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 I E+ A ++++ +++ I+ +YL Sbjct: 143 IMEVTGLAGKLIADSFRAFEIFIVAGAIYL 172 >gi|13475817|ref|NP_107387.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] gi|14026576|dbj|BAB53173.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] Length = 233 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 111/205 (54%), Gaps = 13/205 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 + L AA VTL ++ + F++ +G A R+ S + + + H Y +FRG P Sbjct: 9 GGWGAALLAASSVTLALSVLGFILGAALGATAAAGRLS-SRRVPAWLAHVYGTVFRGVPD 67 Query: 71 LVQLFVIFYG----LPHIGIVF--DSFVAI------IISLTLNFSAYISEIIRSSIISIP 118 L+ +++++YG L IG +F D FV + ++++ + AY E+ R + ++ Sbjct: 68 LLTIYLLYYGGSIALTQIGTLFGSDGFVGLPTFATGVLAIGIISGAYQGEVYRGAYQAVD 127 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ++A A+GL+R Q++R +I+PQ + + L + + +LK +++ S I + E+ + A Sbjct: 128 RGQFEACKALGLSRYQSLRLVIVPQLMRHALPGLGNVWQLVLKDSALISVIGLVELMRQA 187 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT 203 Q +T +P I Y A +Y ++ Sbjct: 188 QIGAGSTREPFIFYVAAAALYFVIA 212 >gi|317405101|gb|EFV85447.1| amino acids ABC transporter [Achromobacter xylosoxidans C54] Length = 229 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 20/201 (9%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS---LIMHFYVWIFRGTPLL 71 QLL + +VVTL + F++S ++ F IAV + T ++ ++ YV R PLL Sbjct: 10 QLLASGMVVTLQL----FLVSWVMAFTIAVTLVVVRATNLAPCRWLVDAYVEYHRNVPLL 65 Query: 72 VQLFVIFYGLPHIGIVFDSFVAII-----------ISLTLNFSAYISEIIRSSIISIPKG 120 VQ+ ++G+P + + + F + I+L L +AYI+E IRS + +IP Sbjct: 66 VQVLFWYFGMPEL--LPEGFRMWLYQHNAEMSLAAIALALGSAAYIAEDIRSGLRAIPGT 123 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ A+G + Q +R +I+PQ + S PL + + K+TSVA I + E+ A+ Sbjct: 124 QFEAARALGASYLQCMRFVIVPQAVRISIPPLVGRALLLFKNTSVAMAIGVMELTYQARE 183 Query: 181 IVSTTYQPLIIYCELAFVYLI 201 I + TY+ + +YL+ Sbjct: 184 IENETYRTFATFGAATLMYLL 204 >gi|257063101|ref|YP_003142773.1| amino acid ABC transporter membrane protein [Slackia heliotrinireducens DSM 20476] gi|256790754|gb|ACV21424.1| amino acid ABC transporter membrane protein [Slackia heliotrinireducens DSM 20476] Length = 230 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 45/135 (33%), Positives = 80/135 (59%), Gaps = 8/135 (5%) Query: 66 RGTPLLVQLFVIFYGLP-------HIGI-VFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 RGTPLLVQ+F+++YG+P + + + ++I+ +LN +++EI RS+I S+ Sbjct: 65 RGTPLLVQMFIVYYGMPILLWNVFRVDVNGWQRLTFVMITYSLNQGGFMAEIFRSAIESV 124 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P Q +A+Y++GL+ QT I+LPQ + T+ S +S+ + TS+A + + ++ Sbjct: 125 PASQTEAAYSVGLSGAQTFLRIVLPQAVRTAIPSFSVNLVSLFQDTSLAFMLGVVDVMGR 184 Query: 178 AQRIVSTTYQPLIIY 192 A+ I S T+ L Y Sbjct: 185 AELIQSATHHVLECY 199 >gi|149376081|ref|ZP_01893847.1| ABC-type arginine transport system, permease component [Marinobacter algicola DG893] gi|149359718|gb|EDM48176.1| ABC-type arginine transport system, permease component [Marinobacter algicola DG893] Length = 234 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 20/208 (9%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P LL A VVT+ +A S ++L++G A ++ S I I Y + RG P LV Sbjct: 9 PALLDGA-VVTIELAFFSLALALVLGLIGASAKLSKSRVAIG-IATTYTTLIRGVPDLVM 66 Query: 74 LFVIFYGLPHIGIV-----------------FDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + + +YG + + FD F++ +I++ L F AY++E R + ++ Sbjct: 67 MLLFYYG-GQVAVNNLSDYLYDAYDIDFFFQFDPFISGVITIGLIFGAYMAETFRGAFLA 125 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + GQ +A+ A G +R +T IILPQ + + + + + +LK+T++ S I + ++ + Sbjct: 126 VESGQIEAARAYGFSRWRTFHRIILPQMLRHALPGIGNNWQVLLKTTALVSIIGLTDMVR 185 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTS 204 A+ P + +AFVYL LT+ Sbjct: 186 VAEEAAKAERMPFHFFIPVAFVYLSLTA 213 >gi|300715837|ref|YP_003740640.1| glutamate/aspartate transport system permease [Erwinia billingiae Eb661] gi|299061673|emb|CAX58789.1| Glutamate/aspartate transport system permease [Erwinia billingiae Eb661] Length = 246 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 102/180 (56%), Gaps = 14/180 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++ +++I+L++G ++R + ++S + YV +FR PL+VQ F+ Sbjct: 25 LWSGFQVTIAVSVCAWIIALLVGSLFGILRTV-PNRLLSTLGTCYVELFRNIPLIVQFFI 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P I F S F ++ L L +A + E +R++I S+P GQ + Sbjct: 84 WYLVIPELLPESISTWFKSELDPNIQFFTCSVLCLGLFTAARVCEQVRAAIQSLPSGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 >gi|227543804|ref|ZP_03973853.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300908873|ref|ZP_07126336.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] gi|68160832|gb|AAY86862.1| lr1198 [Lactobacillus reuteri] gi|227186181|gb|EEI66252.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300894280|gb|EFK87638.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] Length = 487 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 103/191 (53%), Gaps = 9/191 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF---FSDTIISLIMHFYV 62 LI ++P LL + +T+ + + + ++I G + V+ I F++ + S + + Sbjct: 276 LGLIRANYPALLRG-LWMTIELTVVGIIFAMIFGVILGVLGIAQNKFANAVSSTL----I 330 Query: 63 WIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 +IFRG P++V F I+ G+P+ IG F+A I++LT N AYI I++ S+ GQ Sbjct: 331 YIFRGIPMIVLAFFIYMGIPNVIGHKVPLFLAGILTLTFNEGAYIGAIVKGGFESVNIGQ 390 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ ++GL + + +I PQ L ++FI LK TS+ S I + E+ QT I Sbjct: 391 WEAARSLGLPYSKALIKVIAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMELTQTGTVI 450 Query: 182 VSTTYQPLIIY 192 +S + ++ Sbjct: 451 ISQNMEGFKMW 461 >gi|300309584|ref|YP_003773676.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300072369|gb|ADJ61768.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 215 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 52/150 (34%), Positives = 87/150 (58%), Gaps = 7/150 (4%) Query: 61 YVWIFRGTPLLVQLFVIFYG--LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ + +GTPLLV + V FYG L +G V ++ A ++ + SA++ EI R I S+ Sbjct: 52 WIQLIQGTPLLVLMGVCFYGPALAGVGTV-EALPAAATAMLIYTSAFLGEIWRGCIQSVH 110 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS-TITIPEIFQT 177 K QW+A+ IGL+R Q +R I+LPQ + + P + ++K+TSVAS I E+ Sbjct: 111 KSQWEAAECIGLSRWQRMRMIVLPQALRMATPPTVGFAVQVIKNTSVASLVIGFAELSYN 170 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 A+ + ++T+QP + + A +Y + CY Sbjct: 171 AKVLNNSTFQPFLYFGSAALLYF---AMCY 197 >gi|257440785|ref|ZP_05616540.1| amino acid ABC transporter, permease protein [Faecalibacterium prausnitzii A2-165] gi|257196759|gb|EEU95043.1| amino acid ABC transporter, permease protein [Faecalibacterium prausnitzii A2-165] Length = 212 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 73/127 (57%), Gaps = 7/127 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGI-------VFDSFVAIIISLTLNFSAYISEIIRSS 113 +VWI RGTPL++Q+ VI+ G +G+ VA +++ +N++ Y SEI R Sbjct: 46 FVWIIRGTPLMLQIIVIYLGPGLLGMNNPWPSGSGGRMVAAVVAFAINYACYFSEIYRGG 105 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++PKGQ +A +G+T+ Q + L Q + P+ +E I+++K TS+A+TI E Sbjct: 106 IEAVPKGQTEAGQVLGMTKTQIFFKVTLLQVVKRILPPMGNEIITLVKDTSLANTIANKE 165 Query: 174 IFQTAQR 180 I A+ Sbjct: 166 IIMMAKE 172 >gi|160896812|ref|YP_001562394.1| polar amino acid ABC transporter inner membrane protein [Delftia acidovorans SPH-1] gi|160362396|gb|ABX34009.1| polar amino acid ABC transporter, inner membrane subunit [Delftia acidovorans SPH-1] Length = 250 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 101/181 (55%), Gaps = 3/181 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ +S VI+L++G I +R I + + +V +FR PLLV +F+ ++ +P Sbjct: 41 TISVSLLSLVIALVVGSLIGTLRTLEGRPWIVRLGNAWVELFRNIPLLVHIFMWYHVVPS 100 Query: 84 IGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 S FV ++++L SA I+E +RS I ++P+GQ A A+G T Q R+++ Sbjct: 101 FVPALKSLPGFVLVVLALGFFTSARIAEQVRSGIQALPRGQRYAGMAMGFTTFQYYRYVL 160 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LP PL+SE +++ K++SVA +++ E+ A + T + + IY + +Y+ Sbjct: 161 LPMAFRIIIPPLTSETMNVFKNSSVAFAVSVAELTMFAMQAQEETSRGIEIYLAVTGLYV 220 Query: 201 I 201 + Sbjct: 221 V 221 >gi|330863399|emb|CBX73521.1| glutamate/aspartate transport system permease protein gltJ [Yersinia enterocolitica W22703] Length = 263 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 115/214 (53%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ ++VI+ +G ++R + I+S I YV +FR PL+VQ F Sbjct: 42 IWSGFQVTVALSLCAWVIAFFVGSLFGILRTV-PNRILSSIGACYVELFRNVPLIVQFFT 100 Query: 77 IFYGLPHI-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P + G+ F S F++ ++ L L +A + E +R+ I S+P+GQ Sbjct: 101 WYLVVPELLPADLGMWFKSELDPNIQFFLSSMMCLGLFTAARVCEQVRAGIQSLPRGQKA 160 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 161 AGLAMGLTLPQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 220 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 221 YSAHAYESFTAITLGYVLINAVIMLLMRIVEKKV 254 >gi|332160867|ref|YP_004297444.1| putative glutamate/aspartate transport system permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604770|emb|CBY26268.1| glutamate Aspartate transport system permease protein GltJ [Yersinia enterocolitica subsp. palearctica Y11] gi|325665097|gb|ADZ41741.1| putative glutamate/aspartate transport system permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 246 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 115/214 (53%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ ++VI+ +G ++R + I+S I YV +FR PL+VQ F Sbjct: 25 IWSGFQVTVALSLCAWVIAFFVGSLFGILRTV-PNRILSSIGACYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPHI-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P + G+ F S F++ ++ L L +A + E +R+ I S+P+GQ Sbjct: 84 WYLVVPELLPADLGMWFKSELDPNIQFFLSSMMCLGLFTAARVCEQVRAGIQSLPRGQKA 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 204 YSAHAYESFTAITLGYVLINAVIMLLMRIVEKKV 237 >gi|291279628|ref|YP_003496463.1| polar amino acid ABC transporter permease [Deferribacter desulfuricans SSM1] gi|290754330|dbj|BAI80707.1| polar amino acid ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 291 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 61/219 (27%), Positives = 116/219 (52%), Gaps = 29/219 (13%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P ++ ++ TL I+ S ++S IIGF +++ +T LI YV R P +V Sbjct: 58 PNVIMIGVINTLKISIYSIILSTIIGFIFGIMKAS-KNTFFRLISISYVESIRNIPSIVV 116 Query: 74 LFVIFYGLP-------HIGIVFD---------------------SFVAIIISLTLNFSAY 105 +FV+++ L HI + + FV I++L+L SAY Sbjct: 117 IFVVYFFLGDIFLKIFHIEMALNFLYTKYPDFLKLILIDKGKAQVFVIGILALSLYESAY 176 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 ISEI++ +I++I K Q D++ ++G+ + Q +++IILPQ + PL+ + +S +K +++ Sbjct: 177 ISEIVKGAILAIKKEQIDSAKSLGMNKWQRLKYIILPQAMPLIIPPLTGQMVSTIKDSAI 236 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 S I+IPE+ ++++TY I+ + +YL++ + Sbjct: 237 LSVISIPELTFQGMELMASTYLIFEIWIIITVIYLLINT 275 >gi|194467496|ref|ZP_03073483.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] gi|194454532|gb|EDX43429.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] Length = 487 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 103/191 (53%), Gaps = 9/191 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF---FSDTIISLIMHFYV 62 LI ++P LL + +T+ + + + ++I G + V+ I F++ + S + + Sbjct: 276 LGLIRANYPALLRG-LWMTIELTVVGIIFAMIFGVILGVLGIAQNKFANAVSSTL----I 330 Query: 63 WIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 +IFRG P++V F I+ G+P+ IG F+A I++LT N AYI I++ S+ GQ Sbjct: 331 YIFRGIPMIVLAFFIYMGIPNVIGHKVPLFLAGILTLTFNEGAYIGAIVKGGFESVNIGQ 390 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ ++GL + + +I PQ L ++FI LK TS+ S I + E+ QT I Sbjct: 391 WEAARSLGLPYSKALIKVIAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMELTQTGTVI 450 Query: 182 VSTTYQPLIIY 192 +S + ++ Sbjct: 451 ISQNMEGFKMW 461 >gi|149909992|ref|ZP_01898641.1| amino acid ABC transporter, permease protein [Moritella sp. PE36] gi|149807006|gb|EDM66965.1| amino acid ABC transporter, permease protein [Moritella sp. PE36] Length = 254 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 57/249 (22%), Positives = 120/249 (48%), Gaps = 38/249 (15%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L + + ++ ++T+ +A S VI++++G AV R + I S++ Y + RG Sbjct: 2 LDLQGYGPGIFNGAILTVKLAIFSLVIAVLLGLITAVAR-YSGGKISSVLAVSYTSLVRG 60 Query: 68 TPLLVQLFVIFYGLP-----------------------------------HIGIVF--DS 90 P LV + +I++GL G+ F D Sbjct: 61 VPDLVLMMLIYFGLQVGLNNFSEWLYELHETYAINAFYIEHGWLTLSAFYEDGMYFNIDE 120 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 F A ++++ F AY+ E R +++S+ KGQ +A+ A G++ Q ++ PQ + + Sbjct: 121 FSAGVLTIGFIFGAYMGETFRGALLSVDKGQLEAATAYGMSDWQVFHRVMFPQMMRFALP 180 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 + + ++ ++K+T++ S I + ++ + A+ TT++P + + +AFVYL +T+ I+ Sbjct: 181 GIGNNWLVLVKTTALVSIIGLSDMVKLAKEAAMTTFEPFLFFIPVAFVYLAITTVSEIVL 240 Query: 211 IKIESSVTQ 219 +E ++ Sbjct: 241 KYLERHFSK 249 >gi|149021568|ref|ZP_01835623.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP23-BS72] gi|147930264|gb|EDK81249.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP23-BS72] Length = 225 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 91/157 (57%), Gaps = 6/157 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G F + I+ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAVGSFILAMVLGIFFGAMSTS-KRPILRILARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLP----HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 FYGLP HI I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHI-IMIPFYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYI 135 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R IILPQ PL+++ ++++K+TS + I+ Sbjct: 136 SAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|146307937|ref|YP_001188402.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina ymp] gi|145576138|gb|ABP85670.1| L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein [Pseudomonas mendocina ymp] Length = 229 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 12/184 (6%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYG--------LPHIG----IVFDSFVAIIISLTLN 101 ++++ Y + RG P LV + +IFYG P +G I + FVA + ++ Sbjct: 45 LAMLGEAYATVIRGIPDLVLILLIFYGGQDIVNRVAPLLGYDEYIDINPFVAGVFTMGFI 104 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 F AY+SE R + ++IPKGQ +A A G++ Q I++PQ I + ++ ++ + K Sbjct: 105 FGAYLSETFRGAFMAIPKGQGEAGAAYGMSGMQVFFRILVPQMIRFAIPGFTNNWLVLTK 164 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 +T++ S + + ++ A+ T +P Y +A +YL+LTS + +E + T Sbjct: 165 ATALISVVGLQDMMFKAKNAADATREPFTFYLAVAALYLVLTSVSLLALRFLEKRYSVGT 224 Query: 222 YSVD 225 + D Sbjct: 225 KAAD 228 >gi|332529401|ref|ZP_08405362.1| amino acid ABC transporter [Hylemonella gracilis ATCC 19624] gi|332041199|gb|EGI77564.1| amino acid ABC transporter [Hylemonella gracilis ATCC 19624] Length = 250 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 97/178 (54%), Gaps = 20/178 (11%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHI-----GIV------------FDSFVAIIISLTLNF 102 YV FRGTPL VQ+ ++ + L P + G++ + +F + ++L+LN Sbjct: 71 YVTFFRGTPLFVQILLVHFALMPTLVHSEHGLLLTGPLASEFRQNYGAFFSGAVALSLNA 130 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AYISEI R+ I SI +GQ A+Y++G T Q++R++++PQ PL +E I +LK Sbjct: 131 GAYISEIFRAGIQSIHQGQTQAAYSLGFTHAQSMRYVVVPQAARRMVPPLVNEAIMLLKD 190 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +S+ S I + ++ A+ + + Y ++ +YL++T + ++E V +H Sbjct: 191 SSLVSAIGLADLALAARTVAGAYSRYWEPYLAISALYLVMTLLLSLAAKRLE--VPEH 246 >gi|148543337|ref|YP_001270707.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri DSM 20016] gi|184152747|ref|YP_001841088.1| glutamine ABC transporter substrate binding and permease components [Lactobacillus reuteri JCM 1112] gi|227364409|ref|ZP_03848499.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|325683609|ref|ZP_08163125.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] gi|148530371|gb|ABQ82370.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus reuteri DSM 20016] gi|183224091|dbj|BAG24608.1| glutamine ABC transporter substrate binding and permease components [Lactobacillus reuteri JCM 1112] gi|227070502|gb|EEI08835.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|324977959|gb|EGC14910.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] Length = 487 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 101/186 (54%), Gaps = 9/186 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF---FSDTIISLIMHFYV 62 LI ++P LL + +T+ + + + ++I G + V+ I F++ + S + + Sbjct: 276 LGLIRANYPALLRG-LWMTIELTVVGIIFAMIFGVILGVLGIAQNKFANAVSSTL----I 330 Query: 63 WIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 +IFRG P++V F I+ G+P+ IG F+A I++LT N AYI I++ S+ GQ Sbjct: 331 YIFRGIPMIVLAFFIYMGIPNVIGHKVPLFLAGILTLTFNEGAYIGAIVKGGFESVNIGQ 390 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 W+A+ ++GL + + +I PQ L ++FI LK TS+ S I + E+ QT I Sbjct: 391 WEAARSLGLPYSKALIKVIAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMELTQTGTVI 450 Query: 182 VSTTYQ 187 +S + Sbjct: 451 ISQNME 456 >gi|219667105|ref|YP_002457540.1| polar amino acid ABC transporter inner membrane subunit [Desulfitobacterium hafniense DCB-2] gi|219537365|gb|ACL19104.1| polar amino acid ABC transporter, inner membrane subunit [Desulfitobacterium hafniense DCB-2] Length = 195 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 75/123 (60%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I YV + TPL++Q+F ++ GLPHIG++ F ++ + + AYI+E++R+ I + Sbjct: 31 INRVYVEFIQNTPLVIQVFFVYNGLPHIGLMLPVFSVGVLGVGVYHGAYIAEVVRAGIQA 90 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ +A+ + G + +RH+ILPQ PL+++ +S++K+TSV + I ++ Sbjct: 91 IHRGQMEAALSQGFSYWGAMRHVILPQAARVVLPPLTNQAVSLIKNTSVLAMIAGGDLMY 150 Query: 177 TAQ 179 A Sbjct: 151 RAD 153 >gi|332716221|ref|YP_004443687.1| ABC transporter nucleotide binding/ATPase protein [Agrobacterium sp. H13-3] gi|325062906|gb|ADY66596.1| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium sp. H13-3] Length = 601 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 70/233 (30%), Positives = 120/233 (51%), Gaps = 32/233 (13%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EWF F + + + TL + + V+ +G +A+ R+ S +++ + Y+W Sbjct: 68 EWF------FAEPVLVGLGRTLLLTALGAVLGFALGTLLALARVSRSPLLVA-VSWTYIW 120 Query: 64 IFRGTPLLVQLF----------VIFYGLPHIGIVFDS---------FVAIIISLTLNFSA 104 IFR PL+V L + G+P+ GI F S F A ++ LTLN +A Sbjct: 121 IFRSIPLIVLLLILNNLGYLYETVTIGVPYTGINFFSWNTTQLMTPFAAAVLGLTLNQAA 180 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS-SEFISILKST 163 + SEI+R I+S+ +GQ +A+ A+GL R++ I+LPQ + S +P + ++ I + K T Sbjct: 181 FASEIVRGGILSVDQGQLEAAAALGLPRRRQASRIVLPQAM-RSILPTAFNDIIGLAKGT 239 Query: 164 SVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 S + +PE+F T Q I + PL++ + YL++ + I+Q IE Sbjct: 240 SQVYILALPELFYTIQIIYRRNLEVIPLLMVATV--WYLVILTALSIVQHHIE 290 >gi|290473964|ref|YP_003466838.1| arginine ABC transporter membrane protein [Xenorhabdus bovienii SS-2004] gi|289173271|emb|CBJ80046.1| arginine transport protein (ABC superfamily, membrane) [Xenorhabdus bovienii SS-2004] Length = 222 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 67/229 (29%), Positives = 125/229 (54%), Gaps = 22/229 (9%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F I D P L ++ +T+ +F++S+++ F I +R+ I+S ++ Y+ +F Sbjct: 2 FEYIKDILPGL-QTSLSLTVTALLAAFILSVVLTF-ILTMRL----PILSQLVKGYITLF 55 Query: 66 RGTPLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISEIIRSSII 115 GTPLLVQ F+I+YG P I ++ + ++ +++L LN +AY +++ ++ Sbjct: 56 TGTPLLVQFFLIYYGPGQFPSIKEYPWLWQLMSEPWLCAMVTLALNSAAYSTQLFYGAVR 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +IP GQW + A+G+++ ++R I+LP + S+E + I KSTS+ASTIT+ +I Sbjct: 116 AIPTGQWQSCQALGMSKTHSMR-ILLPYAFKRALSSYSNEVVLIFKSTSLASTITLLDIM 174 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYL----ILTSFCYIIQIKIESSVTQH 220 +Q +Y + ++ +YL +LT II+ + S +H Sbjct: 175 GYSQLQFGRSYD-VTVFVAAGVIYLCVNALLTLLMRIIERRALSFEQRH 222 >gi|240850318|ref|YP_002971711.1| amino acid ABC transporter, permease protein [Bartonella grahamii as4aup] gi|240267441|gb|ACS51029.1| amino acid ABC transporter, permease protein [Bartonella grahamii as4aup] Length = 240 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 48/153 (31%), Positives = 88/153 (57%), Gaps = 12/153 (7%) Query: 64 IFRGTPLLVQLFVIFYGLPH-IGIVFD-----------SFVAIIISLTLNFSAYISEIIR 111 +FRG P L+ LF+++YGL I VFD +FVA +++L++ +A+ E+ Sbjct: 65 VFRGLPELLTLFLVYYGLQSLIQNVFDYFNFEIMFSINAFVAGVLALSMVLAAFSCEVWL 124 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + KGQ++A+ A+GL+R T I+ PQ I + LS+ ++++LK TS+ STI + Sbjct: 125 GAFNIFDKGQYEAAKALGLSRSTTFFRIVFPQLIRNALPGLSNNWLTLLKDTSLVSTIAL 184 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 ++ + V+ T +P++ Y +YL+ ++ Sbjct: 185 VDLMRQTNLAVAATNKPMLFYLVACLLYLLFSA 217 >gi|320546926|ref|ZP_08041228.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] gi|320448444|gb|EFW89185.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] Length = 230 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/176 (34%), Positives = 97/176 (55%), Gaps = 15/176 (8%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-----IGIVFDSF---VAIIISLTLNFSAYISEIIRS 112 YV+I R TP +V +F++FYGLP +GI + + V +I+++TL F A ISE+ +S Sbjct: 59 YVFILRCTPPIVLIFLVFYGLPRFIEWWLGIDVNGWSRAVFVILAMTLLFGASISEVFKS 118 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 S ++PKGQ +A +IGLT QT I+LPQ + + + I++LK ++A TI + Sbjct: 119 SYQALPKGQLEAGLSIGLTEYQTFIRILLPQAFRIALPNIVTAIINLLKDIALAYTIGLV 178 Query: 173 EIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 ++ I+S L Y +A VY +L F I + VT++ + +K Sbjct: 179 DLMGEGNLIISRNMGNYSLETYTAVAIVYWVLAFFLSFI-----AHVTENELNTEK 229 >gi|172064621|ref|YP_001812271.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171998106|gb|ACB69022.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 258 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 104/203 (51%), Gaps = 13/203 (6%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL A VT+ +A +S +++ IG A+ ++ S ++S Y + RG P V Sbjct: 34 LPALLRGA-EVTIVLAVLSVALAVCIGMAGAMAKLSGSRVLVSAATA-YTTLIRGVPEFV 91 Query: 73 QLFVIFYG----LPHIGIVF-------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + ++FYG L + VF D+FV ++++ F AY +E R +++ +P+GQ Sbjct: 92 TMLLVFYGGQILLNRLAAVFGLHAPGVDAFVTAVVTIGFIFGAYYTETFRGAMLGVPRGQ 151 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ A G + R I+ PQ + + + ++ +LK+T++AS I + ++ + Sbjct: 152 MEAARAYGFSEWLAFRRILFPQMAQLALPAVVNNWLVLLKTTAIASLIGLHDVMFISDHA 211 Query: 182 VSTTYQPLIIYCELAFVYLILTS 204 TT P+ Y VYL++TS Sbjct: 212 GRTTQAPMTFYLAACAVYLLVTS 234 >gi|1166637|gb|AAA85770.1| histidine transport system permease protein HisQ [Escherichia coli] Length = 228 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 12/204 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++ + TL +A S V+++IIG A ++ + + LI Y + RG P L Sbjct: 4 GFSGVILQGALCTLELAISSVVLAVIIGLIGAGGKLS-QNRLSGLIFEGYTTLIRGVPYL 62 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G+ D VA II+L + AY +E R + +++ KG Sbjct: 63 VLMLLIFYGLQIALNTVTEAMGVGQMDIDPMVAGIITLGFIYGAYFTETFRCAFMAVAKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A+ A G TR Q R I+ P + + + + + ILKST++ S + + ++ + Q Sbjct: 123 HIEAATAFGFTRGQMCRRIMFPSMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 +T++P +YL+ T+ Sbjct: 183 AGKSTWEPFYFAIVCGLIYLVFTT 206 >gi|16264002|ref|NP_436794.1| putative amino acid ABC transporter permease protein [Sinorhizobium meliloti 1021] gi|150376016|ref|YP_001312612.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|307300145|ref|ZP_07579930.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|307316502|ref|ZP_07595945.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|15140126|emb|CAC48654.1| putative amino acid ABC transporter permease protein [Sinorhizobium meliloti 1021] gi|150030563|gb|ABR62679.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] gi|306897700|gb|EFN28443.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306905034|gb|EFN35617.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 221 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 105/198 (53%), Gaps = 4/198 (2%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W N + + PQ+L A VVTL +A +S VI + + V R+ S I+ I +V Sbjct: 6 FHW-NQALRALPQMLDGA-VVTLQVAVLSMVIGVACAIALTVFRLSGSR-ILGGIATTWV 62 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + R TP L Q+++ +GL + GI + A+++ + N + Y++E R ++ +IP Q Sbjct: 63 EVARNTPALFQIYMAHFGLGNFGIHLSPYTALLVGIAFNNAGYLAENFRGALKAIPDTQA 122 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP-EIFQTAQRI 181 A ++G+T Q R I+LPQ + + +P +++ + + TS+ T+ + ++ Q + Sbjct: 123 RAGRSLGMTSLQAFRLIVLPQMLRVAFLPATNQMVWAILMTSLGVTVGMNTDLAGITQEL 182 Query: 182 VSTTYQPLIIYCELAFVY 199 + +++ + A +Y Sbjct: 183 NARSFRTFEFFALAAVIY 200 >gi|22126709|ref|NP_670132.1| arginine transporter permease subunit ArtM [Yersinia pestis KIM 10] gi|45441074|ref|NP_992613.1| arginine transporter permease subunit ArtM [Yersinia pestis biovar Microtus str. 91001] gi|51595715|ref|YP_069906.1| arginine transporter permease subunit ArtM [Yersinia pseudotuberculosis IP 32953] gi|108806633|ref|YP_650549.1| arginine transporter permease subunit ArtM [Yersinia pestis Antiqua] gi|108812796|ref|YP_648563.1| arginine transporter permease subunit ArtM [Yersinia pestis Nepal516] gi|145599621|ref|YP_001163697.1| arginine transporter permease subunit ArtM [Yersinia pestis Pestoides F] gi|149366606|ref|ZP_01888640.1| arginine transport system permease protein [Yersinia pestis CA88-4125] gi|153948343|ref|YP_001401593.1| arginine transporter permease subunit ArtM [Yersinia pseudotuberculosis IP 31758] gi|162418971|ref|YP_001606086.1| arginine transporter permease ArtM [Yersinia pestis Angola] gi|165924357|ref|ZP_02220189.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis biovar Orientalis str. F1991016] gi|165938923|ref|ZP_02227476.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis biovar Orientalis str. IP275] gi|166009895|ref|ZP_02230793.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis biovar Antiqua str. E1979001] gi|166211309|ref|ZP_02237344.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis biovar Antiqua str. B42003004] gi|167399927|ref|ZP_02305445.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419856|ref|ZP_02311609.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424248|ref|ZP_02316001.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470084|ref|ZP_02334788.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis FV-1] gi|170024938|ref|YP_001721443.1| arginine transporter permease subunit ArtM [Yersinia pseudotuberculosis YPIII] gi|218928497|ref|YP_002346372.1| arginine transporter permease subunit ArtM [Yersinia pestis CO92] gi|229841311|ref|ZP_04461470.1| arginine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843414|ref|ZP_04463560.1| arginine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229895787|ref|ZP_04510957.1| arginine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|229903211|ref|ZP_04518324.1| arginine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|270487002|ref|ZP_06204076.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294503341|ref|YP_003567403.1| arginine transport system permease protein [Yersinia pestis Z176003] gi|21959728|gb|AAM86383.1|AE013886_8 arginine 3rd transport system permease protein [Yersinia pestis KIM 10] gi|45435933|gb|AAS61490.1| arginine transport system permease protein [Yersinia pestis biovar Microtus str. 91001] gi|51588997|emb|CAH20615.1| ABC arginine transporter, permease subunit artM [Yersinia pseudotuberculosis IP 32953] gi|108776444|gb|ABG18963.1| arginine transport system permease protein [Yersinia pestis Nepal516] gi|108778546|gb|ABG12604.1| arginine transport system permease protein [Yersinia pestis Antiqua] gi|115347108|emb|CAL20001.1| arginine transport system permease protein [Yersinia pestis CO92] gi|145211317|gb|ABP40724.1| arginine transport system permease protein [Yersinia pestis Pestoides F] gi|149290980|gb|EDM41055.1| arginine transport system permease protein [Yersinia pestis CA88-4125] gi|152959838|gb|ABS47299.1| arginine ABC transporter, permease protein ArtM [Yersinia pseudotuberculosis IP 31758] gi|162351786|gb|ABX85734.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis Angola] gi|165913070|gb|EDR31694.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis biovar Orientalis str. IP275] gi|165923417|gb|EDR40549.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis biovar Orientalis str. F1991016] gi|165991291|gb|EDR43592.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis biovar Antiqua str. E1979001] gi|166207080|gb|EDR51560.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis biovar Antiqua str. B42003004] gi|166962597|gb|EDR58618.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050635|gb|EDR62043.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057097|gb|EDR66860.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751472|gb|ACA68990.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|229678981|gb|EEO75084.1| arginine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|229689761|gb|EEO81822.1| arginine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229697677|gb|EEO87724.1| arginine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700710|gb|EEO88739.1| arginine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|262361381|gb|ACY58102.1| arginine transport system permease protein [Yersinia pestis D106004] gi|262365082|gb|ACY61639.1| arginine transport system permease protein [Yersinia pestis D182038] gi|270335506|gb|EFA46283.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294353800|gb|ADE64141.1| arginine transport system permease protein [Yersinia pestis Z176003] gi|320015800|gb|ADV99371.1| arginine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 222 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 96/171 (56%), Gaps = 12/171 (7%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYG---LPHI-------GIVFDSFVAIIISLTLNFSAYI 106 ++ Y+ +F GTPLLVQ+F+I+YG P I ++ ++ +I+L LN +AY Sbjct: 47 LVKIYITLFTGTPLLVQIFLIYYGPGQFPAIREYPWLWSLLSQPWLCAMIALALNSAAYT 106 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +++ ++ +IP GQW + A+G++++Q++R I+LP + S+E + + K TS+A Sbjct: 107 TQLFYGAVRAIPSGQWQSCEALGMSKRQSLR-ILLPFAFKRALSSYSNEVVLVFKGTSLA 165 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 TIT+ E+ +Q + TY ++++ VYL + ++ +E Sbjct: 166 YTITLMEVMGYSQLMYGRTYD-VMVFGAAGVVYLCVNGLLTLLMRLVERKA 215 >gi|242239984|ref|YP_002988165.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242132041|gb|ACS86343.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 238 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 11/214 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL + S V+ ++ +AV R+ SL + + ++FRGTPL VQL V + Sbjct: 22 GLAMTLWLLISSVVVGGLLAVPLAVARVS-PRRRFSLPVWAFTYVFRGTPLYVQLLVFYS 80 Query: 80 GLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 G+ + V ++F I++L LN AY +EI +I S+P G+ +A+ A G Sbjct: 81 GVYSLEFVRGTDLLNAFFRSGLNCAILALALNTCAYTTEIFAGAIRSVPYGEIEAARAYG 140 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 +R + R IILP + + S+E I +L ST++A T+T+P+I + + I + TY+P Sbjct: 141 FSRFKQYRSIILPGALRIALPAYSNEVILMLHSTALAFTVTVPDILKITRDINAATYKPF 200 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + A +YL ++ + K E +H ++ Sbjct: 201 HAFGIAAVMYLAISFVLVSLFRKAERRWLRHLHT 234 >gi|238063456|ref|ZP_04608165.1| ABC glutamate transporter permease component [Micromonospora sp. ATCC 39149] gi|237885267|gb|EEP74095.1| ABC glutamate transporter permease component [Micromonospora sp. ATCC 39149] Length = 290 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 3/179 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYV 62 +W + + L A + TL A I+ V++L+ G A R+ SD ++ F V Sbjct: 51 KWEQFQYAAVQRELLAGLWATLKAAGIAAVLALLFGAIFASARL--SDRWVLRAPATFVV 108 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +FR PLL+ +F +Y G D A++I L L + ++EI R+ I ++P GQ Sbjct: 109 ELFRAIPLLILIFFGYYVPLQYGWAIDKLWALVIGLMLYNGSVLAEIFRAGINAVPYGQT 168 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 + +YAIGL + Q +R I+LPQ + + S+ + +LK T++ IT PE+ ++I Sbjct: 169 EGAYAIGLRKNQVLRLILLPQAFRSMLPAIVSQLVVLLKDTALGFIITYPELLFVGKQI 227 >gi|268590213|ref|ZP_06124434.1| arginine ABC transporter, permease protein ArtM [Providencia rettgeri DSM 1131] gi|291314494|gb|EFE54947.1| arginine ABC transporter, permease protein ArtM [Providencia rettgeri DSM 1131] Length = 222 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 107/201 (53%), Gaps = 15/201 (7%) Query: 35 SLIIGFFIAVI---RIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD-- 89 +LI+ F +A++ + ++S + Y+ +F GTPLLVQ F+I+ G + D Sbjct: 22 ALIVAFILAILFTLVLSLKTPVVSQAVKIYITLFTGTPLLVQFFLIYNGPSQFKSLQDYP 81 Query: 90 --------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 ++ +++L LN +AY + + ++ +IP GQW + A+G+++ QT+R IIL Sbjct: 82 MLWEIISTPWICAMVALALNSAAYSTLLFHGAVKAIPSGQWQSCQALGMSKMQTMR-IIL 140 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 P S S+E + I KSTS+ASTIT+ ++ +Q I ++ ++ + +YL+ Sbjct: 141 PYAFKRSLSSYSNEVVLIFKSTSLASTITMLDVMGYSQLIFGQSWN-VMAFVAAGIIYLV 199 Query: 202 LTSFCYIIQIKIESSVTQHTY 222 + + ++ IE + + Sbjct: 200 VNAILTVLMRLIERKALEFEH 220 >gi|119945247|ref|YP_942927.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] gi|119863851|gb|ABM03328.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] Length = 223 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 111/205 (54%), Gaps = 7/205 (3%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++ W N++ D+FPQLL A T+ ++ +S ++ ++I +A+ ++ SD+ + M Sbjct: 5 EFHW-NVVFDAFPQLLSGAFT-TIHVSVLSMLLGIVIAVLLALGKM--SDSKVFYNMA-N 59 Query: 62 VWI--FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +WI R P L +++ ++GL GI + ++ +L + Y++E R SIP Sbjct: 60 IWIETARNLPALFLIYMAYFGLGAYGIHLSPYFSVFSALVFINAGYLAETFRGGFQSIPT 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q+ A+ ++G+ + RH+ILPQ P++++F+ + +S+ + + E+ Q Sbjct: 120 TQYSAAKSLGMNSLKVYRHVILPQMFRRIYHPMTNQFVWSILMSSLGILVGMNELSGETQ 179 Query: 180 RIVSTTYQPLIIYCELAFVYLILTS 204 R+ ST+++ L + A +Y ++T Sbjct: 180 RLQSTSFRTLEFFIVAAAMYFVITK 204 >gi|119946449|ref|YP_944129.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] gi|119865053|gb|ABM04530.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] Length = 359 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 71/228 (31%), Positives = 118/228 (51%), Gaps = 20/228 (8%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 WF L + P + +++T+ +A + + S IG +A+ R + +L + F +I Sbjct: 140 WFGL--EEVPTEKWGGLMLTILVAAVGIIASFPIGIVLALGRQSEMPILKTLCVGFIEFI 197 Query: 65 FRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 RG PL+ LF+ LP GI FD + +I +TL SAYI+E+IR + +IPKGQ Sbjct: 198 -RGVPLITILFMASVVLPLFFSDGIDFDKLLRALIGITLFQSAYIAEVIRGGLQAIPKGQ 256 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++A+ ++GL Q + IILPQ + S L FIS+ K T++ + I +F + Sbjct: 257 YEAAESLGLGYWQGMLLIILPQALKISIPNLVGSFISLFKDTTL---VLIIGLFDVLAMV 313 Query: 182 VSTTYQPLIIYCELA---FVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 TT L + E+ FV +I C+ S++Q++ SV++ Sbjct: 314 TLTTSDALWLGYEIEGYVFVTMIYWVCCF--------SMSQYSKSVER 353 >gi|306829228|ref|ZP_07462418.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] gi|304428314|gb|EFM31404.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] Length = 266 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 111/223 (49%), Gaps = 28/223 (12%) Query: 9 IIDSFP---QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + D P Q L I++TL A V++L+ + + R+ I+ + F+V Sbjct: 30 VFDGIPRIVQQLPTTIMLTLSGAIFGLVLALVFAI-VKINRV----KILYPLQAFFVSFL 84 Query: 66 RGTPLLVQLFVIFYGLP--------HIGIVFD-----SFVAIIISLTLNFSAYISEIIRS 112 +GTP+LVQL + +YG+P G F+ + I++ N +AY SE IR+ Sbjct: 85 KGTPILVQLMLTYYGIPLALKALNQQWGTSFNINAIPAATFAIVAFAFNEAAYASETIRA 144 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I+S+ G+ +A+ ++G+TR Q R +I+P + L + I + K TS+A + + Sbjct: 145 AILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKGTSLAFSAGVV 204 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 E+F AQ + Y+ + +A VY +++ I IES Sbjct: 205 EVFAQAQILGGADYRYFERFISVALVY-------WVVNIGIES 240 >gi|283457666|ref|YP_003362251.1| amino acid ABC transporter permease [Rothia mucilaginosa DY-18] gi|283133666|dbj|BAI64431.1| ABC-type amino acid transport system, permease component [Rothia mucilaginosa DY-18] Length = 312 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 89/178 (50%), Gaps = 26/178 (14%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIR--------------IFFSDTIISLIMHFYVWIF 65 + TL A IS V S+ G + R + F + LIM + W+F Sbjct: 78 GLASTLSAAAISVVTSIAFGLLFGIARLSQYRVFRWIGTVVVEFFRAVPVLIMMIFFWLF 137 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 G + GLP + F+A++I LTL + I+E++RS + +P+GQ +A Sbjct: 138 LGK---------YSGLPPAQL---PFIAVVIGLTLYNGSVIAELLRSGVKQLPRGQGEAG 185 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AIGLT QT+ I++PQ T + S+F+ ILK T++ I+ PE+ +A+RI S Sbjct: 186 LAIGLTPSQTLIQILIPQAFTAMMPSMLSQFVVILKDTALGYIISYPELLASARRIGS 243 >gi|260904003|ref|ZP_05912325.1| amino acid ABC transporter membrane protein [Brevibacterium linens BL2] Length = 263 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 115/209 (55%), Gaps = 8/209 (3%) Query: 4 EWFN--LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++FN +I FP+++ A+ T+ + FV++L +G +A+++I S I Y Sbjct: 39 KFFNPDVIAAQFPEIITTALFNTIIYTALGFVLALSLGILLALMKIS-SVAPYRWIATGY 97 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + +FRG P L+ Y +P+ GI D++V ++++L + SAYI+E +R+ + ++PKG Sbjct: 98 IELFRGLPALIVFLAFGYAVPYAFGIRMDTYVTVMLALGIVESAYIAETLRAGLQAVPKG 157 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ ++G++ + + I++PQ PL++E I + K +S+ + + AQ Sbjct: 158 QFEAARSLGMSHSRAMITIVIPQAFRIILPPLTNEIILMTKDSSLIYILGL----TAAQY 213 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYII 209 ++ + I E L++ CY+I Sbjct: 214 ELTKFGREAISNPEAGLTPLVVAGVCYLI 242 >gi|241203420|ref|YP_002974516.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857310|gb|ACS54977.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 230 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 99/174 (56%), Gaps = 14/174 (8%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A+ VTL +A FV S I+G A++ + L++ + V +F+G P+++ +F+ + Sbjct: 16 GAVPVTLAMALGIFVFSTIVGSLFAMVEYRRVPLLRELVVAYKV-VFKGVPMVIVIFLAY 74 Query: 79 YGLPH--------IGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 YGLP +GI ++ +++ +I++LT +A+ +E+++ ++ S GQ DA+ Sbjct: 75 YGLPPTLQFLTSLVGIDYNGHSTPNWITLIVALTACVAAFQAEVVKGALNSFDNGQADAA 134 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Y++G R Q R ++LPQ I + L++ + I+K+ S+ I + +IF +Q Sbjct: 135 YSLGYKRSQVFRRVMLPQVIVAAIPDLANSIMVIMKALSLGFAIEVVDIFAQSQ 188 >gi|119946445|ref|YP_944125.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] gi|119865049|gb|ABM04526.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] Length = 359 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 71/228 (31%), Positives = 118/228 (51%), Gaps = 20/228 (8%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 WF L + P + +++T+ +A + + S IG +A+ R + +L + F +I Sbjct: 140 WFGL--EEVPTEKWGGLMLTILVAAVGIIASFPIGIVLALGRQSEMPILKTLCVGFIEFI 197 Query: 65 FRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 RG PL+ LF+ LP GI FD + +I +TL SAYI+E+IR + +IPKGQ Sbjct: 198 -RGVPLITILFMASVVLPLFFSDGIDFDKLLRALIGITLFQSAYIAEVIRGGLQAIPKGQ 256 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++A+ ++GL Q + IILPQ + S L FIS+ K T++ + I +F + Sbjct: 257 YEAAESLGLGYWQGMLLIILPQALKISIPNLVGSFISLFKDTTL---VLIIGLFDVLAMV 313 Query: 182 VSTTYQPLIIYCELA---FVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 TT L + E+ FV +I C+ S++Q++ SV++ Sbjct: 314 TLTTSDALWLGYEIEGYVFVTMIYWVCCF--------SMSQYSKSVER 353 >gi|254470837|ref|ZP_05084240.1| polar amino acid ABC transporter, inner membrane subunit [Pseudovibrio sp. JE062] gi|211959979|gb|EEA95176.1| polar amino acid ABC transporter, inner membrane subunit [Pseudovibrio sp. JE062] Length = 222 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 103/191 (53%), Gaps = 2/191 (1%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 PQL AIV TL IA S +I + + +AV R +I S + ++ + R TP L+Q Sbjct: 16 PQLAEGAIV-TLQIAVFSMLIGITLAVLLAVARRN-EGSIASRLASVWIEVARNTPCLLQ 73 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 +++ ++GL +GI S+ A++ ++ N + Y++EI+R S+P+ Q+ A+ ++G+ Sbjct: 74 IYLAYFGLGALGINISSYAAVLGAIAFNNAGYLAEILRGGFNSVPQTQYAAARSLGMNSF 133 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + +++LPQ + P+ ++ + L +TS+ I + E+ Q S +++ + Sbjct: 134 RVYSYVVLPQVFRVTFRPIMNQSMWALLNTSLGMVIGLKELTGATQFAQSRSFRTFEFFL 193 Query: 194 ELAFVYLILTS 204 A +Y ++ Sbjct: 194 VAAAMYYVIAK 204 >gi|121601784|ref|YP_988958.1| glutamate/aspartate ABC transporter, permease protein GltJ [Bartonella bacilliformis KC583] gi|121602217|ref|YP_988989.1| glutamate/aspartate ABC transporter, permease protein GltJ [Bartonella bacilliformis KC583] gi|120613961|gb|ABM44562.1| glutamate/aspartate ABC transporter, permease protein GltJ [Bartonella bacilliformis KC583] gi|120614394|gb|ABM44995.1| glutamate/aspartate ABC transporter, permease protein GltJ [Bartonella bacilliformis KC583] Length = 250 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 59/192 (30%), Positives = 106/192 (55%), Gaps = 7/192 (3%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIIS----LIMHFYVWIFRGTPLLVQLFVIFYGLPHI-- 84 S ++++ +G I +R + ++I+ I +V I R PLLVQ+F+ ++ +P I Sbjct: 47 SLILAVFVGVVIGTVRTLPNTSVINNTFRAIGGIWVEIMRNIPLLVQVFLWYFVVPKIYP 106 Query: 85 -GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + F + I +L SA I+E +RS I SIP GQ A+ AIG T Q+ R+I++P+ Sbjct: 107 PAMNFSPIILITCALGFFTSARIAEQVRSGIESIPSGQRYAAMAIGFTTYQSYRYIMIPR 166 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I T PL+SE + I+K++S+A ++I E+ Q + + Y + +Y+I++ Sbjct: 167 AIRTILPPLTSEAMGIVKNSSIAFAVSIHELMQFQYQTIEEVSHVYENYMLVTILYIIIS 226 Query: 204 SFCYIIQIKIES 215 F +++ +E Sbjct: 227 LFIFVMMAIMEK 238 >gi|212213033|ref|YP_002303969.1| arginine transport system permease protein [Coxiella burnetii CbuG_Q212] gi|212011443|gb|ACJ18824.1| arginine transport system permease protein [Coxiella burnetii CbuG_Q212] Length = 221 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 113/214 (52%), Gaps = 22/214 (10%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI-------RIFFSDTIISLIMHFYV 62 ++ F L ++VTL ++ + ++I G +A++ ++ F +I+ I F Sbjct: 4 LEGFGPQLAKGVMVTLAVS----LCAVIFGMGLAILFTLTEFSQLKFLKSIVKSITAF-- 57 Query: 63 WIFRGTPLLVQLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 RG P L+ LF I++G L H + +F A +++L + F+AY + +R +++ Sbjct: 58 --IRGLPELLVLFAIYFGGSALLTKLFHRSVQVSAFSAGVLALGMIFAAYAVQTLRGALL 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +IPKGQ +A A+GL + I+LPQ + L + ++ +LK +++ + I + ++ Sbjct: 116 AIPKGQTEAGKAMGLPGWIIFKRIVLPQAWHHALPGLGNLWLVLLKDSALVALIGLGDLM 175 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYII 209 AQ STT +P Y AF++L+LTS ++ Sbjct: 176 NKAQLAASTTREPFKFYVMAAFLFLLLTSVSQLV 209 >gi|315927549|gb|EFV06882.1| binding-protein-dependent transport system inner membrane component family protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 143 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/125 (39%), Positives = 72/125 (57%), Gaps = 9/125 (7%) Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 D+ A I++L LN SAYI+EI+RS I S+ KGQ +A+ A+GL K +++ IILPQ Sbjct: 12 DNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNI 71 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 L++EFIS+ K TSV I++ +I +Q + + Y P I I T Y Sbjct: 72 LPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNPKPI---------IFTGLVYY 122 Query: 209 IQIKI 213 + +KI Sbjct: 123 VSVKI 127 >gi|307320839|ref|ZP_07600249.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306893549|gb|EFN24325.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] Length = 219 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 102/187 (54%), Gaps = 1/187 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + V++ I+ +S V+ ++G + + + + + I+ Y RGTP+LV + Sbjct: 16 LLKGLGVSVSISLLSIVVGTVLGVIVG-LALVYGFRPVRWIVRGYTDFIRGTPVLVLVLA 74 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +Y L IGI F A +++L + S+++ E++R ++ SIPKGQ +A+ AIGLT QT Sbjct: 75 SYYVLSTIGIDLGPFQAGVLALAVFCSSHVGELVRGALQSIPKGQTEAAKAIGLTFAQTF 134 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +++ PQ + + + ++K++++ S I + E+ Q ++S T+ L Y Sbjct: 135 TYVLGPQALRQALPAWVNTAAEMVKASTLLSIIGVSELLLRTQELISRTFMSLEFYFFAG 194 Query: 197 FVYLILT 203 F+Y ++ Sbjct: 195 FLYFVIN 201 >gi|222087816|ref|YP_002546354.1| nopaline ABC transporter [Agrobacterium radiobacter K84] gi|221725264|gb|ACM28420.1| nopaline ABC transporter [Agrobacterium radiobacter K84] Length = 222 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/190 (31%), Positives = 102/190 (53%), Gaps = 8/190 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 VT+ +A S ++ ++G F+AVI++ + LI Y I RG P L+ + V+++G Sbjct: 14 VTVLVAAASGILGTLLGLFVAVIKLS-QLRLPVLIGQAYTTIVRGLPELLVILVVYFGGT 72 Query: 81 -----LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 L + +F A + +LT+ F AY +EI R +I SIP+GQ +A+ ++GL Q Sbjct: 73 AAITALTGRYVEISAFAAGVAALTVVFGAYCAEIFRGAIQSIPQGQTEAALSLGLASWQV 132 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +ILPQ I + + ++S+LK TS+ S + + +I + A + PL Y Sbjct: 133 WLLVILPQMIRVALPAFGNLWVSLLKDTSLISIVGLTDIMRVAFIGAGSMRAPLTFYLAA 192 Query: 196 AFVYLILTSF 205 + +YL +TS Sbjct: 193 SALYLAMTSL 202 >gi|15900516|ref|NP_345120.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|15902577|ref|NP_358127.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6] gi|111656913|ref|ZP_01407737.1| hypothetical protein SpneT_02001840 [Streptococcus pneumoniae TIGR4] gi|116515469|ref|YP_816031.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] gi|14972083|gb|AAK74760.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|15458108|gb|AAK99337.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae R6] gi|116076045|gb|ABJ53765.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] Length = 225 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 91/157 (57%), Gaps = 6/157 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G F + I+ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAVGSFILAMVLGIFFGAMSTS-KRPILRILARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLP----HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 FYGLP HI I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHI-IMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYI 135 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R IILPQ PL+++ ++++K+TS + I+ Sbjct: 136 SAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|187927128|ref|YP_001897615.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12J] gi|309780169|ref|ZP_07674920.1| amino acid ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|187724018|gb|ACD25183.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12J] gi|308920872|gb|EFP66518.1| amino acid ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 244 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 74/132 (56%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV R TP LVQL +F+GLP +G+ + + A +++ +N AYI+EI+R+ I P+G Sbjct: 60 YVEGIRNTPFLVQLMFVFFGLPSLGVQINEWQAALLTAVVNLGAYITEIVRAGIQETPRG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+ ++R RH++L + LSS+ + ++ TSV S I ++ A Sbjct: 120 QLEAANALAMSRWAVFRHVVLRPALQKVWPALSSQIVIVMLGTSVVSQIAAQDLTFAANF 179 Query: 181 IVSTTYQPLIIY 192 I S ++ Y Sbjct: 180 IQSRNFRAFETY 191 >gi|331002713|ref|ZP_08326228.1| hypothetical protein HMPREF0491_01090 [Lachnospiraceae oral taxon 107 str. F0167] gi|330407126|gb|EGG86630.1| hypothetical protein HMPREF0491_01090 [Lachnospiraceae oral taxon 107 str. F0167] Length = 223 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 55/171 (32%), Positives = 101/171 (59%), Gaps = 4/171 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + L I+ I+ +IS+ +G + ++ + F + II + Y+ R P LV LF+ Sbjct: 18 LLGGLGIALRISLIAVLISIPLGILVGIL-MTFKNPIIKAVFRIYLEFIRIMPQLVLLFI 76 Query: 77 IFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +F+G + G +A +I +L A + +++R +IISIPK Q+++S A+GL ++QT Sbjct: 77 VFFGSTRVLGADISGDLAAVIVFSLWGIAEMGDLVRGAIISIPKHQYESSEALGLDKRQT 136 Query: 136 IRHIILPQTITTSAVPLSSEFIS-ILKSTSVASTITIPEIFQTAQRIVSTT 185 +II+PQT+ +PLS I+ ++K+TS+ I + E+ + AQ+I+ Sbjct: 137 FIYIIIPQTV-KRLIPLSINLITRMIKTTSLVLMIGVVEVIKVAQQIIEAN 186 >gi|289178331|gb|ADC85577.1| Amino acid ABC transporter permease protein [Bifidobacterium animalis subsp. lactis BB-12] Length = 353 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 95/187 (50%), Gaps = 24/187 (12%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-----PHI--GIVFDS------------- 90 + ++ + FY+W FRGTP+ QL +F+GL P + GI S Sbjct: 124 NPVLRGVSWFYIWFFRGTPVYTQL--VFWGLFAVLIPRLSLGIPLTSVEFWSIDSQAIIT 181 Query: 91 -FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 F A I L LN +AY++EI+R+ + ++ GQ +A+ A+G+ R +R +ILPQ + Sbjct: 182 AFNAAWIGLALNEAAYLAEIVRAGLDAVDPGQEEAAKALGMKRSMIMRRVILPQAMRIII 241 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTA-QRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 P +E I +LK+TS+ + Q A I + Y+P+ + + YL +TS + Sbjct: 242 PPTGNETIGMLKTTSLVLAVPFTLDLQYATNAIANRIYKPIPLLLVASIWYLFITSILMV 301 Query: 209 IQIKIES 215 IQ +E Sbjct: 302 IQSMLEK 308 >gi|297624654|ref|YP_003706088.1| polar amino acid ABC transporter inner membrane subunit [Truepera radiovictrix DSM 17093] gi|297165834|gb|ADI15545.1| polar amino acid ABC transporter, inner membrane subunit [Truepera radiovictrix DSM 17093] Length = 417 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 92/159 (57%), Gaps = 11/159 (6%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII---------ISLTLNFSA 104 +++ YV + RG P+LV +++ G P + D+ ++ +++ L ++A Sbjct: 243 LAVFAELYVDMIRGIPMLV--IILYVGFPLQAALRDATGGLLNMPILMRGGVAIALGYAA 300 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 Y++EI R+ I +IPKGQ +A+ ++GL+ Q+ R ++LPQ + PL +EFI++LK TS Sbjct: 301 YMAEIFRAGIEAIPKGQLEAARSLGLSSWQSARFVVLPQALRIVTPPLGNEFIAMLKDTS 360 Query: 165 VASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + S + + E+ Q + ++ +Q + +A +Y+ LT Sbjct: 361 LLSILGVRELTQLTREYQASNFQVFPPFNTVALLYIGLT 399 >gi|186894791|ref|YP_001871903.1| arginine transporter permease subunit ArtM [Yersinia pseudotuberculosis PB1/+] gi|186697817|gb|ACC88446.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis PB1/+] Length = 222 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 96/171 (56%), Gaps = 12/171 (7%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYG---LPHI-------GIVFDSFVAIIISLTLNFSAYI 106 ++ Y+ +F GTPLLVQ+F+I+YG P I ++ ++ +I+L LN +AY Sbjct: 47 LVKIYITLFTGTPLLVQIFLIYYGPGQFPAIREYPWLWSLLSQPWLCAMIALALNSAAYT 106 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +++ ++ +IP GQW + A+G++++Q++R I+LP + S+E + + K TS+A Sbjct: 107 TQLFYGAVRAIPSGQWQSCEALGMSKRQSLR-ILLPFAFKRALSSYSNEVVLVFKGTSLA 165 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 TIT+ E+ +Q + TY ++++ VYL + ++ +E Sbjct: 166 YTITLMEVMGYSQLMYGRTYD-VMVFGAAGVVYLCVNGLLTLLMRLVERKA 215 >gi|157693108|ref|YP_001487570.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032] gi|157681866|gb|ABV63010.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus SAFR-032] Length = 232 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 114/213 (53%), Gaps = 10/213 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +T I +S ++IIG A IRI ++ + Y+ R TPL+VQLF+I++GLP Sbjct: 21 LTFLIMIVSLFFAIIIGLLFACIRIK-QIPVLKQLASVYLSFTRSTPLIVQLFLIYFGLP 79 Query: 83 HIGIV-------FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 + +V +D + ++++ +L+ AY+SE+ RS+ S+ K Q +A+Y +G+T Q Sbjct: 80 QLLLVAGIQINHWDRMLFVMMTFSLHTGAYLSEVFRSAYSSVGKDQLEAAYIVGMTDTQA 139 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI--IYC 193 + II+PQ + L + I ++K T++A TI + ++ + I+ Y + +Y Sbjct: 140 LIRIIIPQAFLIALPNLGNYTIDLVKDTAIAFTIGLIDMMGQVKIILGNNYGIGMFEVYV 199 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 +A VY ++ +I + +E + S+ + Sbjct: 200 IIAVVYWLICMSIELITMLLERKFVKGRTSLSR 232 >gi|295676193|ref|YP_003604717.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] gi|295436036|gb|ADG15206.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 237 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S I + +AV R+ +S + Y ++FRGTPL VQL +I+ Sbjct: 21 SGLAVTLWLLVASIAIGFVCAVPLAVARVS-KKRWLSTPVRLYTYVFRGTPLYVQLLLIY 79 Query: 79 YGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D+F I++ LN AY +EI +I S G+ +A+ A Sbjct: 80 TGVYSLAFVRSHSLLDAFFRSGFHCAILAFALNTCAYTTEIFAGAIRSTSHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++ R I++P + A+PL S+E I +L +T+VA T T+P+I + A+ + S TYQ Sbjct: 140 GMSWFTMYRRIVIPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDVNSATYQ 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL+++ Sbjct: 199 SFNAFGLAALIYLVVS 214 >gi|149365485|ref|ZP_01887520.1| putative glutamate/aspartate transport system permease [Yersinia pestis CA88-4125] gi|165925373|ref|ZP_02221205.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Orientalis str. F1991016] gi|165937693|ref|ZP_02226255.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Orientalis str. IP275] gi|167422564|ref|ZP_02314317.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167468411|ref|ZP_02333115.1| putative glutamate/aspartate transport system permease [Yersinia pestis FV-1] gi|218929695|ref|YP_002347570.1| putative glutamate/aspartate transport system permease [Yersinia pestis CO92] gi|229838161|ref|ZP_04458320.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229898728|ref|ZP_04513873.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|115348306|emb|CAL21237.1| putative glutamate/aspartate transport system permease [Yersinia pestis CO92] gi|149291898|gb|EDM41972.1| putative glutamate/aspartate transport system permease [Yersinia pestis CA88-4125] gi|165914443|gb|EDR33058.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Orientalis str. IP275] gi|165922980|gb|EDR40131.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Orientalis str. F1991016] gi|166958578|gb|EDR55599.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Orientalis str. MG05-1020] gi|229688276|gb|EEO80347.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229694527|gb|EEO84574.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] Length = 246 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 114/214 (53%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ ++VI+ +G ++R + I+S I YV +FR PL+VQ Sbjct: 25 IWSGFQVTVALSLCAWVIAFFVGSLFGILRTV-PNRILSGIGACYVELFRNVPLIVQFLT 83 Query: 77 IFYGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P ++G F S F++ +I L L +A + E +R+ I S+P+GQ Sbjct: 84 WYLVVPELLPVNLGTWFKSELAPNIQFFLSSMICLGLFTAARVCEQVRAGIQSLPRGQKA 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + E+ A +++ Sbjct: 144 AGLAMGLTLTQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAIASTIGLVEMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + ++ +E V Sbjct: 204 YSAHAYESFTAITLGYVLINAVIMLLMRLVEKKV 237 >gi|227514609|ref|ZP_03944658.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum ATCC 14931] gi|227087020|gb|EEI22332.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum ATCC 14931] Length = 223 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 116/222 (52%), Gaps = 19/222 (8%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I+ FP VTL + +SF+++ ++G + + + + ++S + Y+ I RGT Sbjct: 10 ILRGFP--------VTLTLLLVSFILASLLGVALGWLYLR-KNGLLSGLARVYLGIVRGT 60 Query: 69 PLLVQLFVIFYGLP----HIGIVFDSFVAI---IISLTLNFSAYISEIIRSSIISIPKGQ 121 P L+ L + +YGLP +GI D + + II L + +SAY++E RS+ +++ +GQ Sbjct: 61 PPLLMLLLSYYGLPALLKGVGINIDGWSKMTFGIIGLMVGWSAYLAEAFRSAYLAVDQGQ 120 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ A+G+T ++ II+PQ + + + FI ++K TS+ + + +++ A + Sbjct: 121 LEAALAVGITPRRAFFRIIVPQAALIALPNIENLFIGLVKGTSLVYVLGLYDMYNEASNL 180 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 + T IY F+ L L + +++ I+ H Y Sbjct: 181 SNQTNG---IYQLQIFIILALIYWAFVLLIEWGFRTIAHRYQ 219 >gi|33592313|ref|NP_879957.1| amino acids ABC transporter, permease protein [Bordetella pertussis Tohama I] gi|33596426|ref|NP_884069.1| amino acids ABC transporter, permease protein [Bordetella parapertussis 12822] gi|33602283|ref|NP_889843.1| amino acids ABC transporter, permease protein [Bordetella bronchiseptica RB50] gi|33566195|emb|CAE37101.1| amino acids ABC transporter, permease protein [Bordetella parapertussis] gi|33571958|emb|CAE41479.1| amino acids ABC transporter, permease protein [Bordetella pertussis Tohama I] gi|33576722|emb|CAE33800.1| amino acids ABC transporter, permease protein [Bordetella bronchiseptica RB50] gi|332381730|gb|AEE66577.1| amino acids ABC transporter, permease protein [Bordetella pertussis CS] Length = 229 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 98/182 (53%), Gaps = 12/182 (6%) Query: 32 FVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFVIFYGLPHI---- 84 F+++ ++ F +AV+ + T ++ F YV R PLLVQ+ ++G+P + Sbjct: 23 FLVAWVLAFTLAVLLVVIRTTNLAPCRWFVDAYVEYHRNVPLLVQVLFWYFGMPELLPEG 82 Query: 85 --GIVFDSFVAI---IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G ++ + I+L L +AYI+E IRS + +IP Q++A+ A+G + Q +RH+ Sbjct: 83 VRGWLYQHNAELSLAAIALGLGSAAYIAEDIRSGLRAIPGTQFEAARALGSSYLQCMRHV 142 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I+PQ + S PL + + K+TSVA I + E+ A+ I + TY+ + +Y Sbjct: 143 IVPQALRISIPPLVGRALLLFKNTSVAMAIGVVELTYQAREIENETYRTFATFGAATLMY 202 Query: 200 LI 201 L+ Sbjct: 203 LL 204 >gi|330686410|gb|EGG98010.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU121] Length = 229 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 14/213 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + I+ + ++IG A+IR+ + ++ Y FR TPL+VQLFV +YG+P Sbjct: 18 TLAVTLIAMCVGILIGSIFALIRLHRIPGLSQFVV-IYNSFFRSTPLIVQLFVFYYGVPA 76 Query: 84 IGIVFDS-------------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + F++ + I+ +L+ +AY+SE I+ ++S+ Q +A+ +GL Sbjct: 77 FILWFNTIFNTKMNPDMVPPLMIAAITFSLHATAYLSESIKGGLLSVDTKQIEAAQTVGL 136 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + R I+ PQ + + ++FI +LK TS+A + + EI + I + YQ + Sbjct: 137 SNWNVYRRIVFPQAFGYALPNIENQFIMLLKGTSLAFAVQVTEIMAISTEIANEGYQFVP 196 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 +Y A Y L +I K+E T + S Sbjct: 197 VYTVAALFYWALAIIIELIFHKLEHHTTHYLVS 229 >gi|294497133|ref|YP_003560833.1| glutamine ABC transporter permease GlnM [Bacillus megaterium QM B1551] gi|294347070|gb|ADE67399.1| glutamine ABC transporter, permease protein GlnM [Bacillus megaterium QM B1551] Length = 212 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 64/176 (36%), Positives = 102/176 (57%), Gaps = 6/176 (3%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ V S ++G IAV+RI I+++I YV R PL+V +F IF GI Sbjct: 25 SLIALVASFVLGTIIAVMRIA-PLKIVNVIGTVYVEFIRNIPLVVIVFFIFI---VAGI- 79 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 A ++ LT+ +A+I+E IR+ I+++PKGQ +A+ + GLT Q +R IILPQ I Sbjct: 80 -SGTAAGVLGLTIYTAAFIAEAIRAGIMAVPKGQLEAARSSGLTYGQAMRFIILPQAIKI 138 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++FI+++K++SV + ++ A + S TY +Y +A YL+LT Sbjct: 139 VIPPLGNQFINLVKNSSVLGIVAGFDLMYQADLVSSQTYVVFDVYIFVALFYLVLT 194 >gi|261368004|ref|ZP_05980887.1| glutamine ABC transporter, permease protein [Subdoligranulum variabile DSM 15176] gi|282569991|gb|EFB75526.1| glutamine ABC transporter, permease protein [Subdoligranulum variabile DSM 15176] Length = 255 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 94/170 (55%), Gaps = 10/170 (5%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS---FVAI-IISLTLNFSAYISEI 109 +++I Y + RGTP++VQL ++ ++F S F + ++L +N AY+SEI Sbjct: 88 VNVICQVYATVIRGTPMMVQLLIMSM------VIFASSRNFTMVGALALGINSGAYVSEI 141 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IR ++++ GQ +A ++GL T+ II+PQ I + L +EFI +LK TS+ + I Sbjct: 142 IRGGLMAVDPGQMEAGRSLGLNYITTMVLIIIPQAIRSILPSLGNEFIILLKDTSLITVI 201 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 E+ AQ +++ TY+ + +A +YL+L + K+E + Q Sbjct: 202 GGKELLYAAQGVMNRTYEAMFPLLGVAAIYLVLVLLFSALLGKLERRLAQ 251 >gi|238920804|ref|YP_002934319.1| polar amino acid ABC transporter, inner membrane subunit [Edwardsiella ictaluri 93-146] gi|238870373|gb|ACR70084.1| polar amino acid ABC transporter, inner membrane subunit [Edwardsiella ictaluri 93-146] Length = 246 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 102/180 (56%), Gaps = 14/180 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ + VT+ ++ ++VI+ ++G + ++R S + ++I YV +FR PL+VQ F Sbjct: 25 IWSGMQVTIALSLAAWVIAFVLGSLLGILRTLPSRPL-AMIGAIYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPHI-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P + G F FV+ ++ L L +A I E +R++I S+P GQ Sbjct: 84 WYLVVPELLPTDWGNWFKGELDPSIQFFVSSLLCLGLFTAARICEQVRAAIQSLPAGQRS 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+G T QT R+++LP PL+SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGFTLPQTYRYVLLPNAYRVIVPPLTSEMLNLVKNSAIASTIGLMDMAAQAGKLLD 203 >gi|190894701|ref|YP_001984994.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700362|gb|ACE94444.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 219 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 99/184 (53%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ ++ + ++G F+ + + + I+ LI+ Y I RGTP+LV + +Y Sbjct: 19 GIAMTVSISLLAILAGSVLGVFVG-LALVYGGMILRLIVRAYTDIIRGTPVLVLVLASYY 77 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 +G+ F A +++L + S+++ EI+R ++ +IPKGQ +A+ AIGLT QT + Sbjct: 78 VSAAVGLDLGPFSAGVLALAVFCSSHVGEIVRGALQAIPKGQTEAAKAIGLTFTQTFTSV 137 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 + PQ + + ++K++++ S + + E+ Q I+S + L Y +Y Sbjct: 138 LWPQAMRQCLPAWVNTAAEMVKASTLLSVVGVAELLLRTQEIISRNFMSLQFYFLAGGLY 197 Query: 200 LILT 203 I+ Sbjct: 198 FIVN 201 >gi|242239705|ref|YP_002987886.1| arginine transporter permease subunit ArtM [Dickeya dadantii Ech703] gi|242131762|gb|ACS86064.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 223 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 49/162 (30%), Positives = 91/162 (56%), Gaps = 12/162 (7%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYG---------LPHI-GIVFDSFVAIIISLTLNF 102 ++S + Y+ +F GTPLLVQ+F+I+YG +P + ++ ++ + +L LN Sbjct: 43 LLSSLARVYITLFTGTPLLVQIFLIYYGPGQFESIRQIPWLWSLLSQPWLCAVSALALNS 102 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +++ ++ +IP GQW + A+G+ R+ T+ HI+LP + S+E + + K Sbjct: 103 AAYTTQLFYGAVRAIPAGQWQSCAALGMNRRDTL-HILLPFAFKRALSSYSNEVVLVFKG 161 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 TS+A TIT+ E+ Q + TY ++++ VYL + Sbjct: 162 TSLAYTITLMEVMGHGQLLYGRTYD-VLVFGAAGIVYLCVNG 202 >gi|118586385|ref|ZP_01543834.1| glutamine ABC transporter, integral membrane protein [Oenococcus oeni ATCC BAA-1163] gi|118433172|gb|EAV39889.1| glutamine ABC transporter, integral membrane protein [Oenococcus oeni ATCC BAA-1163] Length = 222 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 50/141 (35%), Positives = 84/141 (59%), Gaps = 1/141 (0%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + R PLL+ +F +++ LP IGI F A +I++T+ S ++EIIR +++IP GQ + Sbjct: 66 VIRNLPLLLIIFFVYFALPVIGIYLPVFWATVIAMTVFESTMLAEIIRGGLLAIPIGQTE 125 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 + ++G+T +Q + +IILPQ I P+ S+ IS++K TS+A I + E+ Q I + Sbjct: 126 GARSVGMTNQQALLNIILPQAIKKMIPPIISQLISLVKDTSLAVGIVLAEMTFRGQIIYA 185 Query: 184 TTYQPLI-IYCELAFVYLILT 203 I ++ LA +Y IL Sbjct: 186 QNSNYTIPVFIALAIMYFILN 206 >gi|311103231|ref|YP_003976084.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 1 [Achromobacter xylosoxidans A8] gi|310757920|gb|ADP13369.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 1 [Achromobacter xylosoxidans A8] Length = 239 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 113/213 (53%), Gaps = 15/213 (7%) Query: 1 MKYEW-FNLIIDS-FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 M Y W +N++ + + L + + T+ I+ ++ I+++IG + V+ I ++ Sbjct: 2 MNYAWNWNVLFEEPYAGWLISGLQATVLISLAAWAIAVVIGLALGVLGSLPGR--IRWLL 59 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-----------GIVFDSFVAIIISLTLNFSAYIS 107 YV +FR PLLVQLF+ F+ +P + + I +L L +A ++ Sbjct: 60 TVYVSVFRNVPLLVQLFIWFFVVPELLPGEVGRWLKRDLPMPEIWTAIAALGLFTAARVA 119 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 +RS I ++ +GQ A+YA G+T Q R+I+LPQ + P++SEF+++ K++++A Sbjct: 120 VQVRSGIAALSRGQRLAAYASGMTLAQAYRYILLPQALRLVLPPMTSEFLTVFKNSALAL 179 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 TI + E+ +++I S T+ + VYL Sbjct: 180 TIGVFEMTAQSRQIESYTFSGFEAFTAATLVYL 212 >gi|317046629|ref|YP_004114277.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316948246|gb|ADU67721.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 251 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 54/215 (25%), Positives = 117/215 (54%), Gaps = 3/215 (1%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L++ +P ++ TL I+ ++ + + +G + + R+ +S +V++ RG Sbjct: 15 LLMGQYPNGPLGGVLCTLLISLLAVLFAFPVGILLGLARLS-PWRWLSWPATCWVYLLRG 73 Query: 68 TPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PL++ +F ++ +P IG F ++ +L + SAYI+EI+R I ++P GQ++A+ Sbjct: 74 IPLMMVVFWTYFCVPLLIGHNISGFSTMLCTLVIYESAYIAEIVRGGIQALPHGQYEAAR 133 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G+ +T+R +ILPQ + + L S+ +SI+K +++ I +PE+ A ++ + Sbjct: 134 ALGMGHIKTLRLVILPQALFNTLPSLVSQLVSIIKDSTLGYVINVPELTFAANQVSNQLL 193 Query: 187 -QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +P ++ +A Y I+ + ++E+ + Q Sbjct: 194 TKPFQVFAIVALSYYIICFSLTWLANQLEARLAQK 228 >gi|88800373|ref|ZP_01115939.1| amino acid ABC transporter [Reinekea sp. MED297] gi|88776950|gb|EAR08159.1| amino acid ABC transporter [Reinekea sp. MED297] Length = 217 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 126/214 (58%), Gaps = 4/214 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++ F +I FP L+ + V + +A I ++S++ G +AVI ++ + ++S + F Sbjct: 1 MEFD-FTPVITYFPTLM-KGLGVAIFVAIIVALMSVLGGLLVAVISVYI-NKVLSWPLRF 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 ++W+F TPLL+QL+++++G+ ++ + V I+ L ++ AY ++I +++ S+ G Sbjct: 58 FIWLFMTTPLLLQLYLLYFGIGEW-VLIPAVVVGILGLGFHYMAYNADIFVATLKSVSDG 116 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++AS ++G TI +I++PQ S + + I ++K TSV S I + E+ +Q Sbjct: 117 QYEASRSLGFGHTATIFYILVPQAFIRSIPQIGNNMILMVKDTSVLSAIGVAELVYASQY 176 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 +S +++P + +A +Y I+ F + Q+ +E Sbjct: 177 AISVSFRPFEFFIVIAIMYYIINVFMELGQVWLE 210 >gi|114764422|ref|ZP_01443648.1| putative transport system permease abc transporter protein [Pelagibaca bermudensis HTCC2601] gi|114543176|gb|EAU46194.1| putative transport system permease abc transporter protein [Roseovarius sp. HTCC2601] Length = 276 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 25/173 (14%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI----------------IISLTLNFSAYIS 107 + RGTPLL+QL++I+YGL G +F F I ++LTL+F+AY Sbjct: 106 VIRGTPLLLQLWLIYYGL---GALFAQFPEIRGSWLWPYLRQAWPYGFLTLTLSFAAYQG 162 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 EI+R + +P+G+ +A+ A G+ R R + P+ + + L+ E I LK+T + + Sbjct: 163 EIMRGAFAGVPRGELEAARAFGMPRLMVFRRVWFPRAVHRALPTLAGEIILQLKATPLVA 222 Query: 168 TITIPEIFQTAQRIVST---TYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 TIT+ +++ R+ TY+PL++ L +YL L+ I+ +E V Sbjct: 223 TITVTDLYAVITRVRQDTYLTYEPLLL---LIAIYLCLSGTLTIVLRWLEGRV 272 >gi|330882783|gb|EGH16932.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 217 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 49/142 (34%), Positives = 81/142 (57%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + RG LV LF +F+ LP GI ++ L L FSAY +EIIRS++I++ +G Sbjct: 61 YVEVLRGISALVLLFYLFFILPLFGIRLSPMTTGVLGLGLTFSAYGAEIIRSALINVSQG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q DA A+ R IILPQ + P+ ++ + +LK+TS+ S IT+ ++ T + Sbjct: 121 QRDAVRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQ 180 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 +++T Q +I+ + Y ++ Sbjct: 181 LITTLGQQTLIWSIVLVCYFVM 202 >gi|261343376|ref|ZP_05971021.1| arginine ABC transporter, permease protein ArtM [Providencia rustigianii DSM 4541] gi|282568516|gb|EFB74051.1| arginine ABC transporter, permease protein ArtM [Providencia rustigianii DSM 4541] Length = 222 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 104/193 (53%), Gaps = 15/193 (7%) Query: 35 SLIIGFFIAVIRIF---FSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD-- 89 +L++ F +A++ ++S + Y+ +F GTPLLVQ F+I+ G + D Sbjct: 22 ALLVAFILAILFTLILSLKTPVVSQAVKVYITLFTGTPLLVQFFLIYNGPSQFKSLQDYP 81 Query: 90 --------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 +V +++L LN +AY + + ++ +IP GQW + A+G+++ QT+R IIL Sbjct: 82 ALWEFISTPWVCAMVALALNSAAYSTLLFHGAVKAIPSGQWQSCQALGMSKLQTMR-IIL 140 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 P S S+E + I KSTS+ASTIT+ +I + ++ T+ ++ + +YL+ Sbjct: 141 PYAFKRSLSSYSNEVVLIFKSTSLASTITMLDIMGYSSQVFGQTWD-VMAFVAAGIIYLV 199 Query: 202 LTSFCYIIQIKIE 214 + + I+ IE Sbjct: 200 VNAILTIVMRLIE 212 >gi|218671754|ref|ZP_03521423.1| octopine ABC transporter, permease protein [Rhizobium etli GR56] Length = 193 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 48/148 (32%), Positives = 84/148 (56%), Gaps = 10/148 (6%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLT 99 I I YV++FRG+PLLVQ+F+I+YGL G + + +++LT Sbjct: 45 GGEIGRTITRAYVFVFRGSPLLVQMFLIYYGLGQFRHGLQDLGVWGFFREPYWCAVLALT 104 Query: 100 LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISI 159 LN +AY SEI R ++++ + +A+ A G++ R IILP I + +E I + Sbjct: 105 LNTAAYCSEIFRGGLLAVSAQEIEAARACGMSGILLFRRIILPIAIRHALPAYGNEIILM 164 Query: 160 LKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +K+T++AS ITI E+ A ++++ +++ Sbjct: 165 IKATALASVITIMEVTGLAGKLIADSFR 192 >gi|182439549|ref|YP_001827268.1| putative ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178468065|dbj|BAG22585.1| putative ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 305 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 67/239 (28%), Positives = 119/239 (49%), Gaps = 35/239 (14%) Query: 2 KYEWFNLIIDSFPQLLYA-----AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 +EW D F Q A A+ +TL + V+ +G +A +R+ S + Sbjct: 67 GWEW-----DVFAQFFSAPVILKAVWLTLQLTFYGTVLGFALGIVLAFMRLSAS-PFLRT 120 Query: 57 IMHFYVWIFRGTPLLVQLFVIF----------YGLPHIGIVFDSF---------VAIIIS 97 + + Y+W FR PL+VQL F +G+P G F +F A ++ Sbjct: 121 VAYGYIWAFRSIPLIVQLLFWFNLAYLYKELQFGIP-FGPGFFTFDTMNLVGAVSAAVLG 179 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 L L+ +AY +EI+R ++++ GQ +A+ A+G+ R + +R I+LPQ + + ++E I Sbjct: 180 LALHQAAYAAEIVRGGVLAVGGGQLEAASALGIPRLRQLRRIVLPQAMRSILPNAANEII 239 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 S+ K TS+ S + I E+F Q + + + PL++ Y++LT+ I+Q +E Sbjct: 240 SLFKGTSIVSVMAIGELFYQVQVVYGRSGRVVPLLMVATA--WYILLTTALSIVQYYVE 296 >gi|146342964|ref|YP_001208012.1| glutamate/aspartate ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146195770|emb|CAL79797.1| glutamate/aspartate ABC transporter (permease protein) [Bradyrhizobium sp. ORS278] Length = 243 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 121/244 (49%), Gaps = 19/244 (7%) Query: 1 MKYEW-FNLIIDSFP-------QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT 52 M Y W +++ ++ P +L A + VT+ + +++I+LI G + ++R S Sbjct: 1 MNYTWNWHIFLEPNPTGAGTYFDMLLAGLKVTIVTSLSAWLIALIFGTIVGILRSLPSK- 59 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDS-----FVAIIISLTLNF 102 + I YV FR PLLVQLF+ F+ LP + G+ F + + L Sbjct: 60 LAGWIGFLYVEFFRNMPLLVQLFLWFFVLPELLPRAAGLWLKQMPNAPFFTAAVGIGLFM 119 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 SA ++ + + I S+P+GQ A+ A+GLT Q R+++LP PL+SEF++ +K+ Sbjct: 120 SARVAVQLAAGIGSLPRGQKMAATALGLTTLQVYRYVLLPMAFRIILPPLTSEFLNTVKN 179 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 ++VA TI + E+ A+ + ++Q + +YL++ I +E +V Y Sbjct: 180 SAVAITIGLIELTGAARAMQEFSFQVFEAFSAATLMYLVINIIVVIGMRLLERAVAIPGY 239 Query: 223 SVDK 226 K Sbjct: 240 ITGK 243 >gi|330969960|gb|EGH70026.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 197 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 49/142 (34%), Positives = 81/142 (57%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + RG LV LF +F+ LP GI ++ L L FSAY +EIIRS++I++ +G Sbjct: 33 YVEVLRGISALVLLFYLFFILPLFGIRLSPMTTGVLGLGLTFSAYGAEIIRSALINVSQG 92 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q DA A+ R IILPQ + P+ ++ + +LK+TS+ S IT+ ++ T + Sbjct: 93 QRDALRALDFGPINAFRRIILPQALPFMIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQ 152 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 +++T Q +I+ + Y ++ Sbjct: 153 LITTLGQQTLIWSIVLVCYFVM 174 >gi|302546543|ref|ZP_07298885.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease [Streptomyces hygroscopicus ATCC 53653] gi|302464161|gb|EFL27254.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease [Streptomyces himastatinicus ATCC 53653] Length = 305 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 68/239 (28%), Positives = 120/239 (50%), Gaps = 27/239 (11%) Query: 3 YEWFNLIIDSFP-QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 +EW + D F + + A+ +TL + + +G +A +R+ S + S + Y Sbjct: 68 WEW-EVFADFFATETILKAVWITLQLTFYGTALGFALGIVLAFMRLSRSPFLKS-VAFTY 125 Query: 62 VWIFRGTPLLVQLFVIF----------YGLPHIGIVFDSF---------VAIIISLTLNF 102 +W FR PL+VQL F +G+P G F SF A ++ L L+ Sbjct: 126 IWAFRSIPLIVQLLFWFNLTYLYKKLDFGIP-FGPGFFSFDTAGLVGAMSAAVLGLALHQ 184 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +EI+R ++++ GQ +A+ A+G+ R + +R I+LPQ + + ++E IS+ K Sbjct: 185 AAYAAEIVRGGVLAVDTGQLEAAAALGIPRLRQLRRIVLPQAMRSILPNAANEVISLFKG 244 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 TS+ S + I E+F Q I + PL++ + Y+ILT+ I Q +E ++ Sbjct: 245 TSIVSVMAIGELFYQTQVIYGRNGRVVPLLMVATV--WYIILTTLLSIAQYYVERHFSR 301 >gi|152994485|ref|YP_001339320.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas sp. MWYL1] gi|150835409|gb|ABR69385.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas sp. MWYL1] Length = 220 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 49/160 (30%), Positives = 90/160 (56%), Gaps = 1/160 (0%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV 92 ++ +++G A +R + + ++ YV + R TP +VQLF IF+GLP IG++ + Sbjct: 30 ILGVVLGTVCATVRQY-GNRASQRVVSVYVELIRNTPFIVQLFFIFFGLPAIGMMLSPWE 88 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 A +I+LT+N AY +EIIR+ + SI GQ +A+ +GL +QT+ +I L Sbjct: 89 ASMIALTINLGAYSTEIIRAGLASISNGQIEAAKVLGLNFRQTLTRVIFIPAFEKIYPAL 148 Query: 153 SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +S+ I ++ ++V S I++ ++ A + S ++ Y Sbjct: 149 TSQCIIVMLGSAVISQISVQDLTYAANLVQSRNFRAFESY 188 >gi|330821192|ref|YP_004350054.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Burkholderia gladioli BSR3] gi|327373187|gb|AEA64542.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Burkholderia gladioli BSR3] Length = 223 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 13/192 (6%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS 97 +G +A++R ++ +++ YV R P LV L ++++GLP+ G+ ++ Sbjct: 42 LGLVLALVRAM-QVRVLDVLIVAYVDFLRTMPQLVVLVLVYFGLPYAGLRLSPLATTVLG 100 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 L SA+ EI SSI ++P+GQ +A+ A+G R +T+ IILPQ I S L++ I Sbjct: 101 LGAVLSAFACEIFWSSIQALPRGQSEAALALGFGRWRTLFEIILPQAIRMSIPLLTNRAI 160 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYI---IQIKIE 214 ++ K ++ + + +PE+ AQ +V P L + + CY+ I + + Sbjct: 161 AVSKGVALGTAVALPEVLGQAQSLVGILANP---------SPLTMAALCYLSLFIPLVVL 211 Query: 215 SSVTQHTYSVDK 226 S + T+++ + Sbjct: 212 SRWLERTHTIAR 223 >gi|297156307|gb|ADI06019.1| putative glutamate ABC transporter permease protein [Streptomyces bingchenggensis BCW-1] Length = 214 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 81/143 (56%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +V + R TPL + F + GLP G+V F +++L SA+I E +RS I ++P G Sbjct: 54 WVTVLRNTPLTLLFFAVMLGLPRFGLVLPFFTFAVLALGCYTSAFICEAVRSGINTVPVG 113 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++G+ QT+ ++LPQ T P+ S I++ K++++A + ++ E+ T + Sbjct: 114 QGEAARSLGMNFPQTLGSVVLPQAFRTVIPPIGSTLIALAKNSAIAGSFSVTELLGTYKP 173 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + Y + + +A YLI+T Sbjct: 174 LNERGYSIIWTFVWIALGYLIIT 196 >gi|254473461|ref|ZP_05086858.1| polar amino acid ABC transporter, inner membrane subunit [Pseudovibrio sp. JE062] gi|211957577|gb|EEA92780.1| polar amino acid ABC transporter, inner membrane subunit [Pseudovibrio sp. JE062] Length = 236 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 51/156 (32%), Positives = 90/156 (57%), Gaps = 11/156 (7%) Query: 59 HFYVWIFRGTPLLVQLFVIFYG--------LPHIGIVF---DSFVAIIISLTLNFSAYIS 107 + Y IFRG P L+ LF+++YG L G ++ ++F+A +I+L+L FS+Y S Sbjct: 60 NVYTTIFRGLPELLTLFLVYYGGQILIQQVLSLFGDIYFEVNAFIAGMIALSLVFSSYAS 119 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E S+ +I +GQ++ + A+GL T+R +ILPQ + + LS+ ++ +LK TS+ S Sbjct: 120 EAFLSAFRAIKQGQYEGAAALGLGYAHTMRLVILPQLVRLALPALSNLWLILLKETSLVS 179 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I + +I + + TT +P + + +YL+L Sbjct: 180 IIGLADIIRYSNMAARTTKEPFLFFSVACAIYLVLA 215 >gi|116250818|ref|YP_766656.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115255466|emb|CAK06542.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 230 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 99/174 (56%), Gaps = 14/174 (8%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A+ VTL +A FV S I+G A++ + L++ + V +F+G P+++ +F+ + Sbjct: 16 GAVPVTLAMALGIFVFSTIVGSLFAMVEYRRVPLLRELVVAYKV-VFKGVPMVIVIFLAY 74 Query: 79 YGLPH--------IGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 YGLP +GI ++ +++ +I++LT +A+ +E+++ ++ S GQ DA+ Sbjct: 75 YGLPPTLQFLTSLVGIDYNGHSTPNWITLIVALTACVAAFQAEVVKGALNSFDNGQADAA 134 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Y++G R Q R ++LPQ I + L++ + I+K+ S+ I + +IF +Q Sbjct: 135 YSLGYKRSQLFRRVMLPQVIVAAIPDLANSIMVIMKALSLGFAIEVVDIFAQSQ 188 >gi|90419551|ref|ZP_01227461.1| amino acid ABC transporter, permease protein [Aurantimonas manganoxydans SI85-9A1] gi|90336488|gb|EAS50229.1| amino acid ABC transporter, permease protein [Aurantimonas manganoxydans SI85-9A1] Length = 499 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 107/204 (52%), Gaps = 16/204 (7%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P L+ ++VTL +A SL +G +A+ R S + L ++ +RG PL+ Sbjct: 283 PTNLWGGLMVTLVVAVSGIAASLPLGILLALGRRS-SMPAVRLFCIVFIEFWRGVPLITV 341 Query: 74 LFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LF+ + LP G+ F+ + ++ + L +AY++E+IR + +IPKGQ++ + A+ L Sbjct: 342 LFMANFMLPLFLPEGVTFNQLLRALVGVALFSAAYMAEVIRGGLQAIPKGQYEGADAMAL 401 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR-------IVS 183 T Q +R IILPQ +T + + FI + K TS+ I + ++ T +R I Sbjct: 402 TYWQKMRMIILPQALTLVIPGIVNTFIGLFKDTSLVYIIGLADLLGTVRRGFNDPDWITP 461 Query: 184 TTYQPLIIYCELAFVYLILTSFCY 207 TT +++ AF+Y + FC+ Sbjct: 462 TTPATGLVFA--AFIYWL---FCF 480 >gi|58337335|ref|YP_193920.1| glutamine ABC transporter membrane spanning permease [Lactobacillus acidophilus NCFM] gi|227903959|ref|ZP_04021764.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus acidophilus ATCC 4796] gi|58254652|gb|AAV42889.1| glutamine ABC transporter membrane spanning permease [Lactobacillus acidophilus NCFM] gi|227868350|gb|EEJ75771.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus acidophilus ATCC 4796] Length = 219 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 75/140 (53%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 +F ++S I YV + R TPLL+QLF ++Y P G+ + V II L AY++ Sbjct: 43 YFKVPVLSQISTAYVELARNTPLLIQLFFLYYAFPIFGLKMSAEVCGIIGLIFLGGAYMA 102 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E + K Q ++ A+G+ R Q R+++ PQ + S L++ I ++K TS+ S Sbjct: 103 EGFTGGFNGVTKSQINSGKALGMNRLQLARYVVFPQGVALSVPALAANIIFLIKETSIFS 162 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I IPE+ TA ++ Y+ Sbjct: 163 VIAIPELTNTAMDLIGMYYR 182 >gi|190892981|ref|YP_001979523.1| amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190698260|gb|ACE92345.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 230 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 55/216 (25%), Positives = 115/216 (53%), Gaps = 14/216 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A+ +TL +A + FV+S IIG A++ + L++ + V F+G P++V +F+ + Sbjct: 16 GAVPLTLAMALVIFVLSTIIGSLFAMVEYRRIPVLRQLVVAYKV-AFKGVPMVVVIFLAY 74 Query: 79 YGLPH--------IGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 YGLP +G ++ ++V +I++LT +A+ +E+++ ++ S GQ DA+ Sbjct: 75 YGLPSTLQFLTSLVGGEYNGHSTPNWVTLIVALTACVAAFQAEVVKGALNSFDTGQADAA 134 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Y++G + Q R ++LPQ + + L++ F+ I+K+ S+ I + +IF +Q + Sbjct: 135 YSLGYRKSQLFRRVMLPQVVVAAIPDLANSFMVIMKALSLGFAIEVVDIFAQSQLTAALN 194 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + L + +Y+++ I + E ++ T Sbjct: 195 FYYLEAFLVAVVIYMVIAYAVTQIADRTERALRVRT 230 >gi|269965300|ref|ZP_06179421.1| putative amino acid ABC transporter, permease protein [Vibrio alginolyticus 40B] gi|269830101|gb|EEZ84329.1| putative amino acid ABC transporter, permease protein [Vibrio alginolyticus 40B] Length = 246 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 112/200 (56%), Gaps = 11/200 (5%) Query: 2 KYEWFNLIID-------SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI- 53 Y+W ++D + + L A T+ ++ +S + ++ +G +A+ + SD+ Sbjct: 19 DYQWGWYVLDPSTDQGLTNLKFLIAGFNDTIQVSLLSMLFAMSLGLIVALPAL--SDSAS 76 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRS 112 + I YV + R P+LV L ++YG+P + + + F A +I+LT+ SA+++E+ R Sbjct: 77 LKWINRIYVEVIRSVPVLVLLLWVYYGMPTLLDVSLNHFWAGVIALTIAESAFMAEVFRG 136 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I +I +GQ +A+ ++GL+ Q +R +ILPQ PL ++F+ ILK +S+ S I + Sbjct: 137 GIQAISRGQHEAAESLGLSYWQKMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLS 196 Query: 173 EIFQTAQRIVSTTYQPLIIY 192 ++ + A +V Y PL IY Sbjct: 197 DLTRRANELVVNEYLPLEIY 216 >gi|167589201|ref|ZP_02381589.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ubonensis Bu] Length = 300 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 65/232 (28%), Positives = 117/232 (50%), Gaps = 30/232 (12%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +WF F + + + TL + + V L++G F+A+ R+ S ++S ++W Sbjct: 69 DWF------FAPPVLSGLARTLALTALGAVFGLVLGAFVALARLSRSR-LLSASAWAFIW 121 Query: 64 IFRGTPLLVQLFV----------IFYGLPHIGIVF---------DSFVAIIISLTLNFSA 104 +FR PL+V L + + G+P GI F F+A ++ LTL+ +A Sbjct: 122 LFRSIPLIVLLLILNNLGYLYEHVRLGVPLTGITFVDVATTDLISPFLAAVLGLTLHHAA 181 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 + +E+IR I+S+ +GQ +A+ A+GL R I+LPQ + ++ I + K TS Sbjct: 182 FSAEVIRGGILSVDQGQLEAAAALGLPRAHQTTRIVLPQAMRAILPTAFNDLIMLAKGTS 241 Query: 165 VASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 + + +PE+F T Q I + PL++ + YLI+ + IQ+++E Sbjct: 242 MVYVLAMPELFYTVQVIYRRNLEVIPLLMVATV--WYLIILTVLSAIQVQVE 291 >gi|50120252|ref|YP_049419.1| glutamate/aspartate transport system permease [Pectobacterium atrosepticum SCRI1043] gi|49610778|emb|CAG74223.1| glutamate/aspartate transport system permease protein [Pectobacterium atrosepticum SCRI1043] Length = 246 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 102/178 (57%), Gaps = 14/178 (7%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VT+ ++ +++I+ +IG ++R + +S I YV +FR PL+VQ F + Sbjct: 27 SGLQVTVTLSICAWIIAFLIGSLFGILRTV-PNRFLSSIGTCYVELFRNVPLIVQFFTWY 85 Query: 79 YGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 +P +IG+ F + F++ +I L L +A + E +R+ I S+P+GQ A Sbjct: 86 LVVPELLPVNIGMWFKAELDPNIQFFLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAG 145 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+GLT QT R+++LP PL+SE ++++K++++ASTI + ++ A +++ Sbjct: 146 LAMGLTLPQTYRYVLLPNAYRVIVPPLTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 >gi|307706135|ref|ZP_07642954.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK321] gi|307618535|gb|EFN97683.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK321] Length = 225 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 51/156 (32%), Positives = 90/156 (57%), Gaps = 4/156 (2%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G F + I+ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAMVLGIFFGAMSTS-KRPILRILARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 FYGLP I I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYIS 136 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R IILPQ PL+++ ++++K+TS + I+ Sbjct: 137 AMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|187929543|ref|YP_001900030.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12J] gi|241663662|ref|YP_002982022.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12D] gi|309781682|ref|ZP_07676415.1| glutamine ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|187726433|gb|ACD27598.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12J] gi|240865689|gb|ACS63350.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] gi|308919323|gb|EFP64987.1| glutamine ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 230 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 94/169 (55%), Gaps = 6/169 (3%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI--MHFYVWIFR 66 +I +P + +T +A V++L G + + R+ I +L V++ R Sbjct: 13 LIGQYPNGPLGGLALTFLLASAGLVLALPAGIILGLCRV---SPIAALRWPATALVYVVR 69 Query: 67 GTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 GTPLL+ +F ++ LP + G D F ++ +L + AY++EI+R+ I +P+GQ +++ Sbjct: 70 GTPLLMVIFWAYFLLPSVTGQRTDQFSTMLTALVIFDGAYLAEIVRAGIQGLPRGQMESA 129 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++GL+ Q +R +ILPQ + L ++ +S +K TS+ I++PE+ Sbjct: 130 RSLGLSYMQAMRRVILPQALRNMLPSLVNQLVSTIKETSLGYIISLPEV 178 >gi|330942300|gb|EGH44928.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] Length = 277 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 63/177 (35%), Positives = 106/177 (59%), Gaps = 1/177 (0%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS 97 +GF A+ R+ S + I FY FRGTPLL+Q+ +I+ GLP +GIV + A +I+ Sbjct: 91 LGFVTALARLS-SSAVAFGIASFYASFFRGTPLLIQILLIYLGLPQLGIVPGAITAGVIA 149 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 L+LN+ AY+SEI R+ II + GQ +A+ A+ L Q + LPQ + T P +++FI Sbjct: 150 LSLNYGAYLSEIFRAGIIGVSVGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQFI 209 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 S+LK +S+ S + + E+ AQ ++Y+ + + A +Y I++ ++Q ++E Sbjct: 210 SMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266 >gi|157151612|ref|YP_001449894.1| amino acid ABC transporter permease protein [Streptococcus gordonii str. Challis substr. CH1] gi|157076406|gb|ABV11089.1| amino acid ABC transporter permease protein [Streptococcus gordonii str. Challis substr. CH1] Length = 269 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 57/222 (25%), Positives = 113/222 (50%), Gaps = 19/222 (8%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + D+ P+++ + TL + + L++ A+++I ++ I +V RGT Sbjct: 31 VFDALPRII-EKLPTTLFLTLGGALFGLVLALLFAIVKIN-RVKVLYPIQALFVSFLRGT 88 Query: 69 PLLVQLFVIFYGLP--------HIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSII 115 P+LVQL + +YG+P G F+ + V +++ N +AY SE IR++I+ Sbjct: 89 PILVQLMLTYYGIPIALKVINQRFGTAFNINAIPALVFAVVAFAFNEAAYASETIRAAIL 148 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ +G+ +A+ ++G+T Q R +I+P + L + I + K TS+A + + E+F Sbjct: 149 SVSEGEIEAARSLGMTNTQVYRRVIIPNAAVVATPTLINSLIGLTKGTSLAFSAGVVEVF 208 Query: 176 QTAQRIVSTTYQPLIIYCELAFVY----LILTSFCYIIQIKI 213 AQ + + Y+ + +A VY +++ F I+ K+ Sbjct: 209 AQAQILGGSDYRYFERFISVALVYWVVNIMIEQFGRFIERKM 250 >gi|317492651|ref|ZP_07951078.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919401|gb|EFV40733.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 228 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 54/218 (24%), Positives = 109/218 (50%), Gaps = 12/218 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ + QL+ +VTL +A S ++++ IG A ++ S ++++ I Y + RG Sbjct: 1 MLQGYSQLILNGALVTLELAVSSVLLAVAIGLLGAAAKLSRS-SVLTTIFEGYTTLIRGV 59 Query: 69 PLLVQLFVIFYGLPHI-----------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 P LV + +IFYGL + D VA +I+L + AY +E R + +++ Sbjct: 60 PDLVLMLLIFYGLQMVLNQITDLLGWSQFNIDPLVAGVITLGFIYGAYFTETFRGAFMAV 119 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKGQ +A+ ++G + + R I+ P + + + + + ILK+T++ S + + ++ + Sbjct: 120 PKGQIEAATSLGFSASKIFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLDDLVKA 179 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q T+QP +YL+ T+ + + +E Sbjct: 180 TQIAGKGTWQPFYFAIVAGAIYLLFTTVSNGVLLMLEK 217 >gi|315657127|ref|ZP_07910011.1| amino acid (glutamine) ABC superfamily ATP binding cassette transporter substrate binding protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492230|gb|EFU81837.1| amino acid (glutamine) ABC superfamily ATP binding cassette transporter substrate binding protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 303 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 19/196 (9%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI-------------RIFFSDTIIS 55 +++ + + IV T+ +A I+ ++ +IGF ++ R+ + II Sbjct: 12 LLNKYGGVYLTGIVNTVLLAIIATLLGCVIGFACGILNTIPHPSTDPLLKRVVLA--IIR 69 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHI---GIVFDSFVAI-IISLTLNFSAYISEIIR 111 I+ YV +FRGTP+++Q I+YGLP+ + F S + I +++N AYI+E +R Sbjct: 70 GIIRVYVEVFRGTPMILQAVFIYYGLPYFTNNALQFQSMWGVSIFVVSINTGAYIAESVR 129 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 IIS+ GQ + + AIG+T QT+ ++ILPQ + + + FI +K TSV I Sbjct: 130 GGIISVDPGQTEGARAIGMTHFQTMLYVILPQALRNLLPQIGNNFIINIKDTSVMFIIGF 189 Query: 172 PEIFQTAQRIVSTTYQ 187 E F + + ++ Sbjct: 190 SEFFSVHKMVSGAVFK 205 >gi|86360896|ref|YP_472783.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86284998|gb|ABC94056.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 219 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 99/184 (53%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ ++ + ++G F+ + + + ++ LI+ Y I RGTP+LV + +Y Sbjct: 19 GIAMTVSISLLAILAGSVLGVFVG-LALVYGGIVLRLIVRAYTDIIRGTPVLVLVLASYY 77 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 +G+ F A +++L + S+++ EI+R ++ +IPKGQ +A+ AIGLT QT + Sbjct: 78 VSAAVGLDLGPFSAGVLALAVFCSSHVGEIVRGALQAIPKGQTEAAKAIGLTFAQTFTSV 137 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 + PQ + + ++K++++ S I + E+ Q I+S + L Y +Y Sbjct: 138 LWPQAMRQCLPAWVNTAAEMVKASTLLSVIGVAELLLRTQEIISRNFMSLQFYFLAGGLY 197 Query: 200 LILT 203 I+ Sbjct: 198 FIVN 201 >gi|239909115|ref|YP_002955857.1| amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239798982|dbj|BAH77971.1| amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 231 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 114/212 (53%), Gaps = 7/212 (3%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I ++P+ + +T+ +A + +G + ++RI ++ M F + I RGT Sbjct: 14 LIGAYPKGPLGGLAMTVILAVGGIFGAFWLGLGVGLMRISKKPSLRWPAMGF-IEIIRGT 72 Query: 69 PLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PLL+ +F ++ P + G + +I+L + SAYI+EI+R+ + ++PKGQ +A+ Sbjct: 73 PLLMVVFWFYFLAPVVFGHTLPEAESALIALIVFTSAYIAEIVRAGVEALPKGQMEAARG 132 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY- 186 GL+ Q + HIILPQ + ++F+S+ K TS+A I + E+ + A ++ + T Sbjct: 133 TGLSHFQAMTHIILPQALFNMIPSFVNQFVSLTKDTSLAFIIGVNELTKAATQVNNRTLT 192 Query: 187 QPLIIYCELAFVYLI----LTSFCYIIQIKIE 214 P I+ +A +Y + LT F ++ +I Sbjct: 193 APTEIFITIAVLYFVICYCLTEFSRYLERRIN 224 >gi|282864977|ref|ZP_06274031.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] gi|282560402|gb|EFB65950.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] Length = 214 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 109/197 (55%), Gaps = 2/197 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +++ D+F L + T+ + + +++L +GF +A R+ ++ + I +V + R Sbjct: 2 DVLTDNF-SLYGKGFLGTVELTVYASLLALALGFVMASFRVAPVSSLRA-IGTVWVAVLR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 TPL + F + GLP G+V + +++L SA+I E +RS I ++P GQ +A+ Sbjct: 60 NTPLTLLFFAVLLGLPRFGLVLPFQLFAVLALGCYTSAFICEALRSGINTVPTGQGEAAR 119 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G++ QT+ +++LPQ + P+ S I++ K++++A ++ E+ T + + Y Sbjct: 120 SLGMSFSQTLSNVVLPQAFRSVIPPVGSTLIALAKNSAIAGAFSVTELLGTYKTLNELGY 179 Query: 187 QPLIIYCELAFVYLILT 203 + + +A YLI+T Sbjct: 180 SIIWSFVWIAVGYLIIT 196 >gi|86360892|ref|YP_472779.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86284994|gb|ABC94052.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 223 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 109/198 (55%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F+ ++ +P+++ +++TL + I V+ + +G F A +R + I+ YV + Sbjct: 7 FSWLLQYYPEII-KGVLITLELIAIGGVLGISLGIFCAWVRAL-GPAWLKPIVAAYVELI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP L+QLF IF+GLP +G+ A +++ +N AY EIIR+ I + PKGQ++A Sbjct: 65 RNTPFLIQLFFIFFGLPSLGLHLSELTAANLAMVVNLGAYSCEIIRAGIQATPKGQFEAG 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++ +TR +T RH++L ++ LSS+ + ++ ++V S I ++ A I S T Sbjct: 125 ESLAMTRFETFRHVVLVPSLQRIWPALSSQVVIVMLGSAVVSQIAAEDLTFAANFIQSRT 184 Query: 186 YQPLIIYCELAFVYLILT 203 ++ Y +YL L Sbjct: 185 FRAFEAYIVSTSIYLALA 202 >gi|330902473|gb|EGH33506.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] Length = 192 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 49/142 (34%), Positives = 81/142 (57%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + RG LV LF +F+ LP GI ++ L L FSAY +EIIRS++I++ +G Sbjct: 28 YVEVLRGISALVLLFYLFFILPLFGIRLSPMTTGVLGLGLTFSAYGAEIIRSALINVSQG 87 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q DA A+ R IILPQ + P+ ++ + +LK+TS+ S IT+ ++ T + Sbjct: 88 QRDAVRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQ 147 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 +++T Q +I+ + Y ++ Sbjct: 148 LITTLGQQTLIWSIVLVCYFVM 169 >gi|307708312|ref|ZP_07644779.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus mitis NCTC 12261] gi|307615758|gb|EFN94964.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus mitis NCTC 12261] Length = 225 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 91/157 (57%), Gaps = 6/157 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G F + I+ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAMVLGIFFGAMSTS-KRPILRILARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLP----HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 FYGLP HI I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHI-IMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYI 135 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R IILPQ PL+++ ++++K+TS + I+ Sbjct: 136 SAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|238928188|ref|ZP_04659948.1| amino-acid ABC superfamily ATP binding cassette transporter permease protein [Selenomonas flueggei ATCC 43531] gi|304437587|ref|ZP_07397542.1| amino-acid ABC superfamily ATP binding cassette transporter permease protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|238884148|gb|EEQ47786.1| amino-acid ABC superfamily ATP binding cassette transporter permease protein [Selenomonas flueggei ATCC 43531] gi|304369400|gb|EFM23070.1| amino-acid ABC superfamily ATP binding cassette transporter permease protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 254 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 59/191 (30%), Positives = 103/191 (53%), Gaps = 14/191 (7%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F I+ P LL + + VTL +A +S VI ++G +A + S ++ + YV++ Sbjct: 8 FGQIVQFLPDLL-SYLDVTLLVAGLSIVIGSLLGGLLAWANLSGS-RVLRVCSLAYVYVM 65 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSF----------VAIIISLTLNFSAYISEIIRSSII 115 R TP +V LF++FYG P + VF F V +++ TL F AYISE+ R++ Sbjct: 66 RCTPPIVLLFIVFYGAPKL--VFALFDYDMNAMHRAVFAVVTFTLLFGAYISEVFRAAYT 123 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P+GQ++A+ + GL+ Q H++L Q + + I++LK S+A TI + ++ Sbjct: 124 AVPRGQYEAAVSAGLSPWQAFCHVMLGQAALIALPNFGNSTINLLKEASLAYTIGLIDLI 183 Query: 176 QTAQRIVSTTY 186 I++ Y Sbjct: 184 GRGSLIIAQNY 194 >gi|227524183|ref|ZP_03954232.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] gi|227088653|gb|EEI23965.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] Length = 242 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 99/178 (55%), Gaps = 17/178 (9%) Query: 41 FIAVIRIFFSDTIISLIM--------HFYVWI-------FRGTPLLVQLFVIFYGLPHI- 84 ++ V+ IFF+ TI +++ F+ W+ FRG PLLV I+ G+P + Sbjct: 49 WLTVVSIFFA-TIFGIVVGLMGVVPGKFFNWLSSILIYLFRGMPLLVLALFIYTGIPSLT 107 Query: 85 GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQT 144 G +FVA +++LT N AYI+ ++ I ++ GQ +A+ ++GL +++R +ILPQ Sbjct: 108 GEKIPAFVAGVVTLTFNEGAYIAAFVKGGIQAVDPGQMEAARSLGLPFGKSMRKVILPQG 167 Query: 145 ITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 I ++FI LK TS+ S I + E+ QT + I++ + ++ +A +YLI+ Sbjct: 168 IRIMIPSFINQFIITLKDTSILSIIGLLELTQTGKIIIARNLEGFKVWTIVALMYLII 225 >gi|225860606|ref|YP_002742115.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae Taiwan19F-14] gi|225726892|gb|ACO22743.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae Taiwan19F-14] gi|327390343|gb|EGE88684.1| putative ABC-type amino-acid transporter permease protein [Streptococcus pneumoniae GA04375] Length = 225 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 51/156 (32%), Positives = 90/156 (57%), Gaps = 4/156 (2%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G F + I+ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAMVLGIFFGAMSTS-KRPILRILARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 FYGLP I I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYIS 136 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R IILPQ PL+++ ++++K+TS + I+ Sbjct: 137 AMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|261822383|ref|YP_003260489.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261606396|gb|ACX88882.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 246 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 102/178 (57%), Gaps = 14/178 (7%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VT+ ++ +++I+ +IG ++R + +S I YV +FR PL+VQ F + Sbjct: 27 SGLQVTVTLSICAWIIAFLIGSLFGILRTV-PNRFLSSIGTCYVELFRNVPLIVQFFTWY 85 Query: 79 YGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 +P +IG+ F + F++ +I L L +A + E +R+ I S+P+GQ A Sbjct: 86 LVVPELLPVNIGMWFKAELDPNIQFFLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAG 145 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+GLT QT R+++LP PL+SE ++++K++++ASTI + ++ A +++ Sbjct: 146 LAMGLTLPQTYRYVLLPNAYRVIVPPLTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 >gi|91226241|ref|ZP_01261081.1| putative amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] gi|91189252|gb|EAS75531.1| putative amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] Length = 246 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 112/200 (56%), Gaps = 11/200 (5%) Query: 2 KYEWFNLIID-------SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI- 53 Y+W ++D + + L A T+ ++ +S + ++ +G +A+ + SD+ Sbjct: 19 DYQWGWYVLDPSTDQGLTNLKFLIAGFNDTIQVSLLSMLFAMSLGLIVALPAL--SDSAS 76 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRS 112 + I YV + R P+LV L ++YG+P + + + F A +I+LT+ SA+++E+ R Sbjct: 77 LKWINRIYVEVIRSVPVLVLLLWVYYGMPTLLDVSLNHFWAGVIALTIAESAFMAEVFRG 136 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I +I +GQ +A+ ++GL+ Q +R +ILPQ PL ++F+ ILK +S+ S I + Sbjct: 137 GIQAISRGQHEAAESLGLSYWQKMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLS 196 Query: 173 EIFQTAQRIVSTTYQPLIIY 192 ++ + A +V Y PL IY Sbjct: 197 DLTRRANELVVNEYLPLEIY 216 >gi|317407717|gb|EFV87647.1| hypothetical protein HMPREF0005_03582 [Achromobacter xylosoxidans C54] Length = 223 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 77/128 (60%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 F + R TPLLVQ++ +FY LP G+ I++L L+++ Y +E+ R+ I ++P+ Sbjct: 59 FVIEFVRSTPLLVQMYFLFYVLPLTGVQMSPLATGIVALGLHYATYCAEVYRAGIEAVPR 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ A+ ++ +T ++LPQ I L + +++ K T + S IT+ E+ Q ++ Sbjct: 119 GQLEAARALNMSPWRTAVGVVLPQAIPPVVPALGNYLVAMFKDTPLLSAITVVELLQQSK 178 Query: 180 RIVSTTYQ 187 I STT++ Sbjct: 179 MIGSTTFR 186 >gi|148983988|ref|ZP_01817307.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] gi|148998281|ref|ZP_01825750.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] gi|149005717|ref|ZP_01829456.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|168576493|ref|ZP_02722367.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae MLV-016] gi|169833891|ref|YP_001694087.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae Hungary19A-6] gi|225856307|ref|YP_002737818.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae P1031] gi|303260100|ref|ZP_07346073.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae SP-BS293] gi|303261284|ref|ZP_07347232.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae SP14-BS292] gi|303263949|ref|ZP_07349870.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae BS397] gi|303265940|ref|ZP_07351836.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae BS457] gi|303268322|ref|ZP_07354119.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae BS458] gi|307067224|ref|YP_003876190.1| amino acid ABC transporter permease [Streptococcus pneumoniae AP200] gi|307126807|ref|YP_003878838.1| glutamine ABC transporter membrane-spanning permease [Streptococcus pneumoniae 670-6B] gi|147755924|gb|EDK62968.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] gi|147762657|gb|EDK69617.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|147924135|gb|EDK75247.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] gi|168996393|gb|ACA37005.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae Hungary19A-6] gi|183577716|gb|EDT98244.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae MLV-016] gi|225724546|gb|ACO20398.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae P1031] gi|301799654|emb|CBW32214.1| putative amino acid ABC transporter, permease protein [Streptococcus pneumoniae OXC141] gi|302637418|gb|EFL67905.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae SP14-BS292] gi|302638795|gb|EFL69257.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae SP-BS293] gi|302642160|gb|EFL72510.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae BS458] gi|302644524|gb|EFL74775.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae BS457] gi|302646354|gb|EFL76580.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae BS397] gi|306408761|gb|ADM84188.1| ABC-type amino acid transport system, permease component [Streptococcus pneumoniae AP200] gi|306483869|gb|ADM90738.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae 670-6B] gi|332077038|gb|EGI87500.1| putative ABC-type amino-acid transporter permease protein [Streptococcus pneumoniae GA17545] gi|332202485|gb|EGJ16554.1| putative ABC-type amino-acid transporter permease protein [Streptococcus pneumoniae GA41317] Length = 225 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 91/157 (57%), Gaps = 6/157 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G F + I+ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAMVLGIFFGAMSTS-KRPILRILARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLP----HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 FYGLP HI I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHI-IMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYI 135 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R IILPQ PL+++ ++++K+TS + I+ Sbjct: 136 SAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|315655010|ref|ZP_07907914.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii ATCC 51333] gi|315490666|gb|EFU80287.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii ATCC 51333] Length = 303 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 19/196 (9%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI-------------RIFFSDTIIS 55 +++ + + IV T+ +A I+ ++ +IGF ++ R+ + II Sbjct: 12 LLNKYGGVYLTGIVNTVLLAIIATLLGCVIGFACGILNTIPHPSTDPLLKRVVLA--IIR 69 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHI---GIVFDSFVAI-IISLTLNFSAYISEIIR 111 I+ YV +FRGTP+++Q I+YGLP+ + F S + I +++N AYI+E +R Sbjct: 70 GIIRVYVEVFRGTPMILQAVFIYYGLPYFTNNALQFQSMWGVSIFVVSINTGAYIAESVR 129 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 IIS+ GQ + + AIG+T QT+ ++ILPQ + + + FI +K TSV I Sbjct: 130 GGIISVDPGQTEGARAIGMTHFQTMLYVILPQALRNLLPQIGNNFIINIKDTSVMFIIGF 189 Query: 172 PEIFQTAQRIVSTTYQ 187 E F + + ++ Sbjct: 190 SEFFSVHKMVSGAVFK 205 >gi|218682668|ref|ZP_03530269.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli CIAT 894] Length = 223 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 108/198 (54%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++ +P+++ I+VTL + I V+ + +G A +R + ++ YV + Sbjct: 7 FGWLLQYYPEII-KGILVTLELIAIGGVLGISLGIVCAWVRAL-GPAWLKPVVAAYVELI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP L+QLF IF+GLP +G+ A +++ +N AY EIIR+ I + PKGQ++A Sbjct: 65 RNTPFLIQLFFIFFGLPSLGLQLPELTAANLAMVINLGAYSCEIIRAGIQATPKGQFEAG 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++ +TR +T RH++L ++ LSS+ + ++ +SV S I ++ A I S T Sbjct: 125 ESLAMTRFETFRHVVLVPSLQRIWPALSSQVVIVMLGSSVVSQIAAEDLTFAANFIQSRT 184 Query: 186 YQPLIIYCELAFVYLILT 203 ++ Y +YL++ Sbjct: 185 FRAFEAYIVSTAIYLVMA 202 >gi|307710648|ref|ZP_07647081.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK564] gi|307618591|gb|EFN97734.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK564] Length = 233 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 91/157 (57%), Gaps = 6/157 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G F + I+ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAMVLGIFFGAMSTS-KRPILRILARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLP----HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 FYGLP HI I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHI-IMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYI 135 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R IILPQ PL+++ ++++K+TS + I+ Sbjct: 136 SAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|304389822|ref|ZP_07371781.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326998|gb|EFL94237.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 303 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 19/196 (9%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI-------------RIFFSDTIIS 55 +++ + + IV T+ +A I+ ++ +IGF ++ R+ + II Sbjct: 12 LLNKYGGVYLTGIVNTVLLAIIATLLGCVIGFACGILNTIPHPSTDPLLKRVVLA--IIR 69 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHI---GIVFDSFVAI-IISLTLNFSAYISEIIR 111 I+ YV +FRGTP+++Q I+YGLP+ + F S + I +++N AYI+E +R Sbjct: 70 GIIRVYVEVFRGTPMILQAVFIYYGLPYFTNNALQFQSMWGVSIFVVSINTGAYIAESVR 129 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 IIS+ GQ + + AIG+T QT+ ++ILPQ + + + FI +K TSV I Sbjct: 130 GGIISVDPGQTEGARAIGMTHFQTMLYVILPQALRNLLPQIGNNFIINIKDTSVMFIIGF 189 Query: 172 PEIFQTAQRIVSTTYQ 187 E F + + ++ Sbjct: 190 SEFFSVHKMVSGAVFK 205 >gi|307329670|ref|ZP_07608828.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] gi|306884728|gb|EFN15756.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] Length = 214 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 93/173 (53%), Gaps = 5/173 (2%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWI--FRGTPLLVQLFVIFYGLPHIGIVFDS 90 +++L +G +A R+ + SL W+ R TPL + F + GLP G+V Sbjct: 27 LLALALGILMAAFRV---APVASLRAFGTAWVTVLRNTPLTLLFFAVMLGLPRFGLVLPF 83 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 V +I+L SA+I E +R+ I ++P GQ +A+ +G+T QT+ ++LPQ + Sbjct: 84 TVFAVIALGCYTSAFICEAVRAGINTVPVGQGEAARGLGMTFDQTLSAVVLPQAFRSVIP 143 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 P+ S I++ K++++A + ++ E+ T + + Y + + +A YLI+T Sbjct: 144 PIGSTLIALAKNSAIAGSFSVTELLGTYKPLNERGYSVIWSFVWIAAGYLIIT 196 >gi|238755069|ref|ZP_04616417.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia ruckeri ATCC 29473] gi|238706773|gb|EEP99142.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia ruckeri ATCC 29473] Length = 246 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 115/214 (53%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ ++VI+ IG ++R + ++ + YV +FR PL+VQ F Sbjct: 25 IWSGFQVTVALSLCAWVIAFFIGSLFGILRTV-PNRFLAAMGTCYVELFRNVPLIVQFFT 83 Query: 77 IFYGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P +IG+ F + F++ ++ L L +A + E +R+ I S+P+GQ Sbjct: 84 WYLVVPELLPTNIGMWFKTELDPNIQFFLSSMLCLGLFTAARVCEQVRAGIQSLPRGQKA 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+++ + +I +E V Sbjct: 204 YSAHAYESFTAITLAYVLINAVIMLIMRLVEKKV 237 >gi|315182021|gb|ADT88934.1| hypothetical transmembrane permease component of ABC transporter [Vibrio furnissii NCTC 11218] Length = 239 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 116/217 (53%), Gaps = 13/217 (5%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P LL A + TL I IS ++ ++ ++++RI + + + +++ FRGTPL+ Q Sbjct: 10 PMLLDGAWM-TLKITFISVSLAALLALPMSLLRIQRAR-VYRWPVQWFISFFRGTPLIAQ 67 Query: 74 LFVIFYG-------LPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 LF+++YG L +G+ D F +++ T N AY +EI+R +I S+ G+ + Sbjct: 68 LFLLYYGSGQFRPWLMEMGLWHFFRDPFNCALLAFTFNSLAYQTEILRGAIQSVDAGEIE 127 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++G+ RHI+LP + L +E I +LK +VAS IT+ ++ +R S Sbjct: 128 AAKSMGMNNSLLYRHIVLPLAYRIAFPALGNECILMLKGGAVASVITVMDLMGQTRRAFS 187 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T+ + Y A +YLI+ + ++ + E + +H Sbjct: 188 QTFD-ISTYFLAAGLYLIIATVFVMVWRQAERYLYRH 223 >gi|239635972|ref|ZP_04676989.1| L-cystine transport system permease protein TcyL [Staphylococcus warneri L37603] gi|239598437|gb|EEQ80917.1| L-cystine transport system permease protein TcyL [Staphylococcus warneri L37603] Length = 229 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 108/213 (50%), Gaps = 14/213 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + I+ + ++IG A+IR+ ++S + Y FR TPL+VQLFV +YG+P Sbjct: 18 TLAVTLIAMCVGILIGSIFALIRLH-QIPVLSQFVVIYNSFFRSTPLIVQLFVFYYGVPA 76 Query: 84 IGIVFDS-------------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + F++ + I+ +L+ +AY+SE I+ ++S+ Q +A+ +GL Sbjct: 77 FILWFNAICHTSMNPDMVPPLLIAAITFSLHATAYLSESIKGGLLSVDTKQIEAAQTVGL 136 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 ++ R I+ PQ + + ++FI +LK TS+A + + EI + + + YQ + Sbjct: 137 SKWNVYRRIVFPQAFGYALPNIENQFIMLLKGTSLAFAVQVTEIMAISTEMANEGYQFVP 196 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 +Y A Y L +I K+E T + S Sbjct: 197 VYTVAAIFYWALAIIIELIFHKLELHTTHYLVS 229 >gi|297567185|ref|YP_003686157.1| polar amino acid ABC transporter inner membrane subunit [Meiothermus silvanus DSM 9946] gi|296851634|gb|ADH64649.1| polar amino acid ABC transporter, inner membrane subunit [Meiothermus silvanus DSM 9946] Length = 364 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 57/189 (30%), Positives = 109/189 (57%), Gaps = 9/189 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF--FSDTIISLIMHFYVW 63 +LI DSF L+ A + + C++ V L+ G IAV R+ + + I + Y Sbjct: 143 LSLIQDSF-GLVLQAFWKNVWMFCVAEVFILVWGLVIAVARMVPGRAGSPIRFLATVYTD 201 Query: 64 IFRGTPLLVQLFVIFYGLP--HIGIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIP 118 FRG P ++ +++I GLP ++ +V D ++A++ +LT+++ AY++E+ R+ + SI Sbjct: 202 AFRGLPTIISIYLIALGLPLANVPLVRDWPPEWLAVL-ALTVSYGAYVAEVYRAGLDSIH 260 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 QW A+ ++GL+ QT+R +I+PQ + PL ++FI++ K T++ + + + + F A Sbjct: 261 PSQWAAARSLGLSFSQTLRFVIIPQAVRRIIPPLLNDFIALQKDTALVNVVGVIDGFNQA 320 Query: 179 QRIVSTTYQ 187 + I S + Sbjct: 321 KIIASNRFN 329 >gi|121602407|ref|YP_988904.1| amino acid ABC transporter, permease protein [Bartonella bacilliformis KC583] gi|120614584|gb|ABM45185.1| amino acid ABC transporter, permease protein [Bartonella bacilliformis KC583] Length = 235 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 66/222 (29%), Positives = 113/222 (50%), Gaps = 12/222 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++DS+ ++VTL + ISF I ++ I + + + ++ Y + FR + Sbjct: 14 LLDSYGLKFLDGLIVTLELVSISFFIGFLLSIPITLGHLS-KNELLKYSAQTYTYFFRSS 72 Query: 69 PLLVQLFVIFYGL-------PHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLL QLF+ +YGL IG+ + +++ I LN +AY + I S S+ Sbjct: 73 PLLAQLFLFYYGLGSIRDFWEKIGLWWFFQNAWYCCIFIFALNSAAYQTIIFIGSFSSVK 132 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +AS A+GL +ILPQ + + PL +EF I+KS+++AS ITI ++ A Sbjct: 133 IGQHEASKALGLHSSTKFFKVILPQAMILALRPLGNEFTLIMKSSAIASLITIYDLMGIA 192 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + + + T +Y A +YLI+ + I IE +T++ Sbjct: 193 KLLYARTLD-FQVYIWAAIIYLIIVELIHRFIILIERRLTRY 233 >gi|116491604|ref|YP_811148.1| ABC-type amino acid transport system, permease component [Oenococcus oeni PSU-1] gi|290891211|ref|ZP_06554273.1| hypothetical protein AWRIB429_1663 [Oenococcus oeni AWRIB429] gi|116092329|gb|ABJ57483.1| amino acid ABC transporter membrane protein 1, PAAT family [Oenococcus oeni PSU-1] gi|290479175|gb|EFD87837.1| hypothetical protein AWRIB429_1663 [Oenococcus oeni AWRIB429] Length = 214 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 61/181 (33%), Positives = 103/181 (56%), Gaps = 4/181 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + I+ + S ++G A+++I S T ++I Y+ +FR PLL+ V+F+ L Sbjct: 19 TLLSSIIALIASTVLGTLFAILQIVPSKTA-NVIARAYIEVFRNIPLLI--IVMFFYLVV 75 Query: 84 IGIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 IV F A I LTL SA+I+E +R+ I S+ GQ + + A GL+ QT+R IILP Sbjct: 76 TKIVKIGGFTAGTIGLTLYTSAFIAETVRAGINSVGIGQTEGARANGLSSWQTLRIIILP 135 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + L ++FI+++K++S+ + + ++ TA + +TT+ Y + YLI+ Sbjct: 136 QAFKIAIPSLGNQFINLVKNSSILAFVAGGDLMYTANNVAATTFDSFNSYIIVGIFYLII 195 Query: 203 T 203 T Sbjct: 196 T 196 >gi|294670526|ref|ZP_06735406.1| hypothetical protein NEIELOOT_02248 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307805|gb|EFE49048.1| hypothetical protein NEIELOOT_02248 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 248 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 62/165 (37%), Positives = 96/165 (58%), Gaps = 26/165 (15%) Query: 61 YVWIFRGTPLLVQLFVIFY----------------GLPHIGIVFD--SFVAIIISLTLNF 102 YV +FRGTPL VQ+F+ +Y G I + D + A +++LT N Sbjct: 69 YVTLFRGTPLFVQIFIWYYVWSVALIHPEHGWLVNGEQAIAMRRDYGAITAGVLALTANA 128 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AYI+EI R+ I+SI KGQ +A+ ++GLT Q +R +ILPQ PL++EFI++LK Sbjct: 129 TAYITEIFRAGILSIDKGQMEAARSLGLTYPQAMRFVILPQAFRRMLPPLANEFITLLKD 188 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCE----LAFVYLILT 203 +S+ S+I + E+ QR +S + IY E +A +YL++T Sbjct: 189 SSLLSSIAVAEL-TYVQRTISGRFS---IYEEPLYAIALIYLLMT 229 >gi|298346439|ref|YP_003719126.1| polar amino acid ABC transporter membrane subunit [Mobiluncus curtisii ATCC 43063] gi|298236500|gb|ADI67632.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane subunit [Mobiluncus curtisii ATCC 43063] Length = 303 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 19/196 (9%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI-------------RIFFSDTIIS 55 +++ + + IV T+ +A I+ ++ +IGF ++ R+ + II Sbjct: 12 LLNKYGGVYLTGIVNTVLLAIIATLLGCVIGFACGILNTIPHPSTDPLHKRVVLA--IIR 69 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHI---GIVFDSFVAI-IISLTLNFSAYISEIIR 111 I+ YV +FRGTP+++Q I+YGLP+ + F S + I +++N AYI+E +R Sbjct: 70 GIIRVYVEVFRGTPMILQAVFIYYGLPYFTNNALQFQSMWGVSIFVVSINTGAYIAESVR 129 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 IIS+ GQ + + AIG+T QT+ ++ILPQ + + + FI +K TSV I Sbjct: 130 GGIISVDPGQTEGARAIGMTHFQTMLYVILPQALRNLLPQIGNNFIINIKDTSVMFIIGF 189 Query: 172 PEIFQTAQRIVSTTYQ 187 E F + + ++ Sbjct: 190 SEFFSVHKMVSGAVFK 205 >gi|206562620|ref|YP_002233383.1| histidine transport system permease [Burkholderia cenocepacia J2315] gi|198038660|emb|CAR54620.1| histidine transport system permease [Burkholderia cenocepacia J2315] Length = 229 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 53/219 (24%), Positives = 108/219 (49%), Gaps = 12/219 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +I F LL+A V T+ +A +S SLI+G A ++ ++ ++ + FY + R Sbjct: 1 MIFQGFGPLLWAGTVETVKLAVLSLAASLILGLAGAAAKLS-ANRVLKSVGTFYTTLIRA 59 Query: 68 TPLLVQLFVIFYG-----------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 P LV + ++FYG L I D FVA +++L + AY +E R + ++ Sbjct: 60 VPDLVLMLLLFYGIQILLNDVTDLLGWDQIDIDPFVAGVVTLGFIYGAYFTETFRGAFLA 119 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ +A +A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + Sbjct: 120 VPRGQLEAGFAYGMSGWRVFHRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVK 179 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +Q +T +YL +T+ ++ +E Sbjct: 180 ASQDAGKSTLDFFFFTLAAGAIYLAITTVSNVVLHHLEK 218 >gi|300172546|ref|YP_003771711.1| glutamine ABC transporter permease [Leuconostoc gasicomitatum LMG 18811] gi|299886924|emb|CBL90892.1| glutamine ABC transporter, permease protein [Leuconostoc gasicomitatum LMG 18811] Length = 219 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 100/181 (55%), Gaps = 17/181 (9%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 L + +T+ ++ IS ++SLI G + +I R+ + + I + I R PLL+ Sbjct: 18 LLGGLGITVGVSVISVILSLIFGSIVGIIQFERLPYFSKFVGTINN----IIRNLPLLLI 73 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 +F +++ LP IGI F A +I+++ SA ++EI+R + S+ GQ++ + A GL+ Sbjct: 74 IFFVYFALPKIGIHLPIFWATVIAMSTFESAMLAEIVRGGLESVDNGQFEGARANGLSNM 133 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 QT+ +I+LPQ P+ S+ IS++K TS+A I + E+ TY+ I+Y Sbjct: 134 QTMIYIVLPQAYKKMIPPIISQLISLVKDTSLALGIVLSEM----------TYRGQIVYA 183 Query: 194 E 194 + Sbjct: 184 Q 184 >gi|296162378|ref|ZP_06845171.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295887411|gb|EFG67236.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 235 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 13/220 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L I T+ + + V+ I G A + I+F ++ + V + R TP LVQLFV Sbjct: 17 LLRGIGTTVAMCVCAIVLMFIFGIVGAAV-IYFRVPLLETLTTIVVELLRNTPPLVQLFV 75 Query: 77 IFYGLPHIGI------------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 +++ L +G+ VF F +++SL L EI+RS + ++P DA Sbjct: 76 LYFTLSELGLSVRSLATGQQIPVFSGFTCVVLSLALYNGGIAVEIVRSGLHAVPDATVDA 135 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G +R +T HI LP + S VP+++ +S++K++S A+ + + ++ A +I Sbjct: 136 ARSLGYSRLRTFWHIQLPMAMRLSTVPMTNNIVSLIKTSSQAAFVAVADVMYYATQITLE 195 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 ++ + + YL L SF + ++ ++ Y V Sbjct: 196 NFRNFEVMLVVWGCYLALASFASTVAGRVGRAMRIPGYGV 235 >gi|256832815|ref|YP_003161542.1| polar amino acid ABC transporter, inner membrane subunit [Jonesia denitrificans DSM 20603] gi|256686346|gb|ACV09239.1| polar amino acid ABC transporter, inner membrane subunit [Jonesia denitrificans DSM 20603] Length = 313 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 52/173 (30%), Positives = 95/173 (54%), Gaps = 4/173 (2%) Query: 37 IIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL---FVIFYGLPHIGIVFDSFVA 93 ++G V R+ S ++ V FR P+L+ + +V+F + I VA Sbjct: 85 VLGTLFGVGRLANS-VVVRWTCGIIVEFFRAVPVLIMMVAGWVLFSRVDAIPRSDAPLVA 143 Query: 94 IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS 153 ++++LTL A I+E++RS + +P GQ +A+ A+G+TR Q+IR + LPQ + L Sbjct: 144 VVVALTLYNGAVIAELVRSGVHGLPSGQREAALAVGMTRGQSIRSVELPQALLAMLPSLV 203 Query: 154 SEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFC 206 S+F+ ILK +++ +T PE+ + A+ + S + P++ LA V +L ++ Sbjct: 204 SQFVVILKDSALGQIVTYPELLRQARLLGSRSPMPILQVMLLAAVLFVLINYA 256 >gi|242278994|ref|YP_002991123.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242121888|gb|ACS79584.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 231 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 107/201 (53%), Gaps = 6/201 (2%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +FP + ++ +A + + IG ++R+ + + + Y+ + RG PL Sbjct: 16 GAFPDGPIGGLAASIILALLGIFGAFWIGLAAGLMRLS-RNRAVKTVSVIYIEVIRGVPL 74 Query: 71 LVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 L+ +F ++ P + G F +I+ + AYI EI+++ +I++P+GQ +A+ G Sbjct: 75 LMLIFWFYFLAPVVLGRSLPEFHCALIAFIVFTGAYIGEIVKAGVIALPRGQMEAARGTG 134 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ-P 188 L+ Q +R++ILPQ + ++F+S+ K TS+A I + E+ +TA ++ + T P Sbjct: 135 LSHVQAMRYVILPQALRNMIPSFVNQFVSLTKDTSLAYIIGVNELTRTATQVNNRTLSAP 194 Query: 189 LIIYCELAFVYLILTSFCYII 209 I+ +A +Y I+ CY++ Sbjct: 195 TEIFITIAILYFIV---CYVL 212 >gi|170696123|ref|ZP_02887258.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170138938|gb|EDT07131.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 258 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 64/213 (30%), Positives = 113/213 (53%), Gaps = 19/213 (8%) Query: 4 EWFN----LIIDSFPQ--LLYAAIVVTLPI--ACISFVISLIIGFFIAVIRIFFSDTIIS 55 EW L++ +FP L AA+ V L + A +S V+ L G +A+ R ++ Sbjct: 5 EWLPTLRYLLLGAFPNGPLGGAALTVVLSVVSALLSAVVGLAGGVALALTRGGAYVVLLG 64 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 ++ FR P+L+ +F F+ +P HI + VA++ +L+L AY+S + + Sbjct: 65 IVA-----FFRAIPVLMLIFWTFFLMPMLLHIDV--PGLVAVVCALSLIGGAYLSHAVHA 117 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I+S+ GQ A+ ++GLTR Q +RH++LPQ + ++++S++K TS+A + +P Sbjct: 118 GIVSVGAGQQQAALSLGLTRWQALRHVVLPQAVRIMLPSFVNQWVSLVKDTSLAYIVGVP 177 Query: 173 EIFQTAQRIVSTTY-QPLIIYCELAFVYLILTS 204 E A ++ S P I+ + VYL+L S Sbjct: 178 EFTFLANQVNSRLMIYPAQIFVFVGIVYLVLCS 210 >gi|170736177|ref|YP_001777437.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169818365|gb|ACA92947.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 229 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 53/219 (24%), Positives = 107/219 (48%), Gaps = 12/219 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +I F LL+A V T+ +A +S SLI+G A ++ ++ ++ + FY + R Sbjct: 1 MIFQGFGPLLWAGTVETVKLAVLSLAASLILGLAGAAAKLS-ANGVLKSVGTFYTTLIRA 59 Query: 68 TPLLVQLFVIFYG-----------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 P LV + ++FYG L I D F A +++L + AY +E R + +S Sbjct: 60 VPDLVLMLLLFYGIQILLNDVTDLLGWDQIDIDPFAAGVVTLGFIYGAYFTETFRGAFLS 119 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ +A +A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + Sbjct: 120 VPRGQLEAGFAYGMSGWRVFHRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVK 179 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +Q +T +YL +T+ ++ +E Sbjct: 180 ASQDAGKSTLDFFFFTLAAGAIYLAITTVSNVVLHHLEK 218 >gi|257069824|ref|YP_003156079.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] gi|256560642|gb|ACU86489.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] Length = 322 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 26/206 (12%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-----PHI- 84 S V+ ++ A++R + ++ + Y+++FRG P+ QL +F+GL P I Sbjct: 80 SMVLGTVVALTAAIMR-RSDNAVLRGVSWAYIFVFRGIPVYTQL--VFWGLFTVIVPKIV 136 Query: 85 -GIVFD-------------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 G+ F +F A +I L LN AY++EIIRS + S+ GQ +AS A+G+ Sbjct: 137 IGVPFGPELLSFSTRDLLTAFWAAVIGLGLNEGAYLAEIIRSGLNSVDTGQTEASKALGM 196 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTS--VASTITIPEIFQTAQRIVSTTYQP 188 + + +R II+PQ + PL +E I +LK+TS +A T+ F T I + + P Sbjct: 197 SNGKILRRIIVPQAMRVIVPPLGNETIGMLKTTSLVLAVPFTLDLTFAT-NGIANKLFTP 255 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIE 214 + + A YL +TS + Q +E Sbjct: 256 IPLLIVAALWYLAITSVLMVGQYYLE 281 >gi|213022683|ref|ZP_03337130.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 235 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 112/201 (55%), Gaps = 14/201 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L++ VT+ ++ +++I+ ++G ++R + +S + YV +FR PL+VQ F Sbjct: 25 LWSGFQVTVALSITAWIIAFLVGSIFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPHI-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P + G+ F + F++ +I L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVVPELLPEDLGMWFKAELDPNIQFFLSSMICLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTS 204 + + + Y+++ + Sbjct: 204 YSAHAWESFTAITLAYVLINA 224 >gi|209547541|ref|YP_002279459.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538785|gb|ACI58719.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 223 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 108/198 (54%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++ +P+++ I+VTL + I V+ + +G A +R + ++ YV + Sbjct: 7 FGWLLQYYPEII-KGILVTLELIAIGGVLGISLGIVCAWVRAL-GPAWLKPVVASYVELI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP L+QLF IF+GLP +G+ A +++ +N AY EIIR+ I + PKGQ++A Sbjct: 65 RNTPFLIQLFFIFFGLPSLGLQLPELTAANLAMVINLGAYSCEIIRAGIQATPKGQFEAG 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++ +TR +T RH++L ++ LSS+ + ++ +SV S I ++ A I S T Sbjct: 125 ESLAMTRFETFRHVVLVPSLQRIWPALSSQVVIVMLGSSVVSQIAAEDLTFAANFIQSRT 184 Query: 186 YQPLIIYCELAFVYLILT 203 ++ Y +YL++ Sbjct: 185 FRAFEAYIVSTAIYLVMA 202 >gi|299530122|ref|ZP_07043548.1| glutamine-binding periplasmic protein [Comamonas testosteroni S44] gi|298721779|gb|EFI62710.1| glutamine-binding periplasmic protein [Comamonas testosteroni S44] Length = 220 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 100/175 (57%), Gaps = 2/175 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E L+ D P + A+++T + +SFV +++G +AV+R+ + L + YV Sbjct: 3 EVSRLLADYGPAF-WQALLLTWKLTVVSFVPGVMLGTVVAVLRLMPLPPL-RLALTVYVE 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 IFR P + L I + LP + IV D ++I++LTL SA+ ++ +RS I +IP Q + Sbjct: 61 IFRNIPSVALLIFIVFALPDLNIVIDYEPSVILTLTLVCSAFTADYLRSGINTIPGSQIE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 A+ ++G+ Q + ++LPQ + + P++S I+++ STS+AS + P TA Sbjct: 121 AALSLGMRPLQIVSAVVLPQALRSVVQPMTSLLIALMLSTSLASQLPFPGRELTA 175 >gi|289626773|ref|ZP_06459727.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648366|ref|ZP_06479709.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330868474|gb|EGH03183.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 277 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 63/176 (35%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 39 GFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISL 98 GF A+ R+ S + I FY FRGTPLL+Q+ +I+ GLP IGIV + A +I+L Sbjct: 92 GFVTALARLS-SSAVAFGIASFYASFFRGTPLLIQILLIYLGLPQIGIVPGAITAGVIAL 150 Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158 +LN+ AY+SEI R+ II + GQ +A+ A+ L Q + +PQ + T P +++FIS Sbjct: 151 SLNYGAYLSEIFRAGIIGVSAGQREAALALALRPAQIFWRVTVPQAMRTIIPPTTNQFIS 210 Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 +LK +S+ S + + E+ AQ ++Y+ + + A +Y I++ ++Q ++E Sbjct: 211 MLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266 >gi|197302609|ref|ZP_03167664.1| hypothetical protein RUMLAC_01338 [Ruminococcus lactaris ATCC 29176] gi|197298507|gb|EDY33052.1| hypothetical protein RUMLAC_01338 [Ruminococcus lactaris ATCC 29176] Length = 228 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 17/192 (8%) Query: 7 NLIIDSFP---QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHF 60 LI++ FP Q L + TL + ++ + +L +G IA F S + + I + Sbjct: 2 ELIMEQFPIVIQSLNVGFLQTLKLFFVTLLGALPLGLIIA----FGSMSHFRPLKYITNI 57 Query: 61 YVWIFRGTPLLVQLFVIFY--GLPHIGIVFDS-----FVAIIISLTLNFSAYISEIIRSS 113 VW+ RGTPL++Q+ +I+Y GL +V+ FVA ++ N++ Y S I R Sbjct: 58 IVWVVRGTPLMIQMLIIYYFPGLVLNNVVWGGGESGRFVAASVAFIFNYACYFSVIYRGG 117 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I S+P+GQ +A +G+T+ Q I L Q I P+S+E I+++K TS+A I + E Sbjct: 118 IQSVPQGQTEAGLVLGMTKSQIFFKITLMQMIKRIVPPMSNEIITLVKDTSLARIIALQE 177 Query: 174 IFQTAQRIVSTT 185 I Q + + Sbjct: 178 IIWAGQSFLKGS 189 >gi|167836531|ref|ZP_02463414.1| amino acid ABC transporter, permease protein [Burkholderia thailandensis MSMB43] Length = 194 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 49/145 (33%), Positives = 87/145 (60%), Gaps = 4/145 (2%) Query: 78 FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 ++GLP + SF++ +++L AY SEIIR+ + ++P GQ +ASYAIGL+ T+R Sbjct: 48 YFGLPSAHVTLSSFLSSVLALAWCTGAYTSEIIRAGLQAVPHGQREASYAIGLSEVDTLR 107 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT--YQPLIIYCEL 195 II+PQ + S PL + +L++TS+ T+ +PE+ AQ+I + T Y P++I L Sbjct: 108 LIIVPQGLRVSIPPLLGFGVIMLQTTSLCFTVALPELVTKAQQIGNETFLYMPVLILAAL 167 Query: 196 AFVYLILTSFCYIIQIKIESSVTQH 220 + + + S ++ +E +++H Sbjct: 168 LYTAICVPS--TLLVSSLERRLSRH 190 >gi|330950462|gb|EGH50722.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 225 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 49/142 (34%), Positives = 81/142 (57%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + RG LV LF +F+ LP GI ++ L L FSAY +EIIRS++I++ +G Sbjct: 61 YVEVLRGISALVLLFYLFFILPLFGIRLSPMATGVLGLGLTFSAYGAEIIRSALINVSQG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q DA A+ R IILPQ + P+ ++ + +LK+TS+ S IT+ ++ T + Sbjct: 121 QRDAVRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQ 180 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 +++T Q +I+ + Y ++ Sbjct: 181 LITTLGQQTLIWSIVLVCYFVM 202 >gi|218678695|ref|ZP_03526592.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli CIAT 894] Length = 219 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 99/184 (53%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I VT+ I+ ++ + ++G F+ + + + ++ L++ Y I RGTP+LV + +Y Sbjct: 19 GIGVTVSISLLAILAGSVLGVFVG-LALVYGGVVLRLLVRAYTDIIRGTPVLVLVLASYY 77 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 +G+ F A +++L + S+++ EI+R ++ +IPKGQ +A+ AIGLT QT + Sbjct: 78 VSAAVGLDLGPFSAGVLALAVFCSSHVGEIVRGALQAIPKGQTEAAKAIGLTFTQTFTSV 137 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 + PQ + + ++K++++ S I + E+ Q I+S + L Y +Y Sbjct: 138 LWPQDMRQCLPAWVNTAAEMVKASTLLSVIGVAELLLRTQEIISRNFMSLQFYFLAGGLY 197 Query: 200 LILT 203 I+ Sbjct: 198 FIVN 201 >gi|323357719|ref|YP_004224115.1| amino acid ABC transporter permease [Microbacterium testaceum StLB037] gi|323274090|dbj|BAJ74235.1| ABC-type amino acid transport system, permease component [Microbacterium testaceum StLB037] Length = 344 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 23/234 (9%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 +Y W F + + I TL + IS V+ +G +A+ R+ S ++S + Y Sbjct: 62 RYMWGTFAQYFFAEPVLIGIGYTLSLTAISAVVGFALGTLLALGRLSPSP-LVSSVAWGY 120 Query: 62 VWIFRGTPLLVQLFVIFYGL----PHIGI-----------------VFDSFVAIIISLTL 100 +W FR PL+VQ+ +++Y L P +G+ + +F A I+ L L Sbjct: 121 IWFFRSVPLVVQI-IVWYNLGYLYPTLGLGTPFTTDFWIVEFPTVQLVSAFAAAILGLGL 179 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 + +AY +EIIR ++S+ GQ +A+ A+G+ + + IILPQ + + ++E I ++ Sbjct: 180 HQAAYSAEIIRGGLVSVDPGQHEAAAALGIPASRRLFRIILPQAMRSIVPNATNEVIGLV 239 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 K SV I IPE+F Q + + + + + Y I+T+ + Q IE Sbjct: 240 KGASVVFVIAIPELFYAVQVVYNRNSRVIPLLLVAVVWYTIITTILSVAQYYIE 293 >gi|295702499|ref|YP_003595574.1| glutamine ABC transporter permease GlnM [Bacillus megaterium DSM 319] gi|294800158|gb|ADF37224.1| glutamine ABC transporter, permease protein GlnM [Bacillus megaterium DSM 319] Length = 211 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 64/176 (36%), Positives = 102/176 (57%), Gaps = 6/176 (3%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 + I+ V S ++G IAV+RI I+++I YV R PL+V +F IF GI Sbjct: 24 SLIALVASFVLGTIIAVMRIA-PLKIVNVIGTAYVEFIRNIPLVVIVFFIFI---VAGI- 78 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 A ++ LT+ +A+I+E IR+ I+++PKGQ +A+ + GLT Q +R IILPQ I Sbjct: 79 -SGTAAGVLGLTIYTAAFIAEAIRAGIMAVPKGQLEAARSSGLTYGQAMRFIILPQAIKI 137 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++FI+++K++SV + ++ A + S TY +Y +A YL+LT Sbjct: 138 VIPPLGNQFINLVKNSSVLGIVAGFDLMYQADLVSSRTYVVFDVYIFVALFYLVLT 193 >gi|89897022|ref|YP_520509.1| hypothetical protein DSY4276 [Desulfitobacterium hafniense Y51] gi|89336470|dbj|BAE86065.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 223 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 75/123 (60%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 I YV + TPL++Q+F ++ GLPHIG++ F ++ + + AYI+E++R+ I + Sbjct: 59 INRVYVEFIQNTPLVIQVFFVYNGLPHIGLMLPVFSVGVLGVGVYHGAYIAEVVRAGIQA 118 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ +A+ + G + +RH+ILPQ PL+++ +S++K+TSV + I ++ Sbjct: 119 IHRGQMEAALSQGFSYWGAMRHVILPQAARVVLPPLTNQAVSLIKNTSVLAMIAGGDLMY 178 Query: 177 TAQ 179 A Sbjct: 179 RAD 181 >gi|83718785|ref|YP_442304.1| amino acid ABC transporter permease [Burkholderia thailandensis E264] gi|167619282|ref|ZP_02387913.1| histidine transport system permease protein [Burkholderia thailandensis Bt4] gi|83652610|gb|ABC36673.1| amino acid ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 237 Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S + +AV R+ + +S + FY ++FRGTPL VQL +I+ Sbjct: 21 SGLAVTLWLLVASLGFGFVCAVPLAVARVS-KNRWLSTPVRFYTYVFRGTPLYVQLLLIY 79 Query: 79 YGLPHIGIVFD----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D I++ LN AY +EI +I +I G+ +A+ A Sbjct: 80 TGMYSLAFVRDHAFLDTFFRSGMNCAILAFALNTCAYTTEIFAGAIRAIAHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++ R +ILP ++ A+PL S+E I +L +T+VA T T+P+I + A+ S TY Sbjct: 140 GMSPFTMYRRVILPSSLR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYM 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL ++ Sbjct: 199 AFQSFGIAALIYLAVS 214 >gi|330965817|gb|EGH66077.1| amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 225 Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 81/143 (56%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + RG LV LF +F+ LP GI ++ L L FSAY +EIIRS++I++ + Sbjct: 60 LYVEVLRGISALVLLFYLFFILPLFGIRLSPMTTGVLGLGLTFSAYGAEIIRSALINVSQ 119 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ DA A+ R IILPQ + P+ ++ + +LK+TS+ S IT+ ++ T Sbjct: 120 GQRDALRALDFGPVSAFRRIILPQALPFMIPPMGNQLVELLKTTSLVSLITLTDLTFTGS 179 Query: 180 RIVSTTYQPLIIYCELAFVYLIL 202 ++++T Q +I+ + Y ++ Sbjct: 180 QLITTLGQQTLIWSIVLVCYFVM 202 >gi|37525533|ref|NP_928877.1| arginine transporter permease subunit ArtQ [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784961|emb|CAE13879.1| Arginine transport system permease protein artQ [Photorhabdus luminescens subsp. laumondii TTO1] Length = 238 Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 62/236 (26%), Positives = 115/236 (48%), Gaps = 29/236 (12%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L +A +T+ +A + V+ LI+ A +++ +V +FRG P ++ + Sbjct: 5 QSLTSAAGITVGLAVSALVLGLILAMLFAAWESARWKPF-AILGTCWVTLFRGLPEILVV 63 Query: 75 FVIFYGLPH----------IGIVF--------------DSFVAIIISLTLNFSAYISEII 110 +++G I ++F F+ +I+L+L +SAY S+ + Sbjct: 64 LFVYFGASQLLMTLADGFDINLIFWHSRIQIDIQDFYVSPFLCGVIALSLLYSAYASQTL 123 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R +I +IP GQW+A A+GL R + +I+PQ + L ++++ +LK T++ S I+ Sbjct: 124 RGAIKAIPIGQWEAGQALGLGRAEIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLIS 183 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 + ++ Q + I + T +P Y +A +YL +T I KIE HT D+ Sbjct: 184 VNDLMQQTKSIATRTQEPFTWYMIVALIYLAITLISQFILKKIE----MHTTRFDR 235 >gi|218674962|ref|ZP_03524631.1| putative permease component of ABC transporter [Rhizobium etli GR56] Length = 223 Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 109/204 (53%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F ++ +P ++ I VTL + + V+ + +G F A +R + ++ Sbjct: 1 MSYHFEFGWLLQYYPDII-KGIFVTLELIAVGGVLGISLGIFCAWVRAL-GPAWLKPVVA 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TP L+QLF IF+GLP +G+ A +++ +N AY EIIR+ I + PK Sbjct: 59 AYVELIRNTPFLIQLFFIFFGLPSLGLHLSELTAANLAMVVNLGAYSCEIIRAGIQATPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A ++ +TR +T RH++L ++ LSS+ + ++ +SV S I ++ A Sbjct: 119 GQFEAGESLAMTRFETFRHVVLVPSLQRIWPALSSQVVIVMLGSSVVSQIAAEDLTFAAN 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I S T++ Y +YL L Sbjct: 179 FIQSRTFRAFEAYFVSTAIYLALA 202 >gi|332704805|ref|ZP_08424893.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio africanus str. Walvis Bay] gi|332554954|gb|EGJ51998.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio africanus str. Walvis Bay] Length = 229 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 112/213 (52%), Gaps = 13/213 (6%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV-W- 63 + ++ ++F L+ A P+ ++ I L IG + ++ L ++ W Sbjct: 3 WQVVWNNFDYFLWGAWP-NGPLGGLAMSILLSIGGIFGAFWLGLGAGLMRLSKRLWIAWP 61 Query: 64 ------IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + RG PLL+ +F ++ P + G + +IS + SAY++EI+R+ ++S Sbjct: 62 AIVYIEVVRGIPLLLVIFWFYFLSPVLFGAPLPEAQSALISFIIFTSAYVAEIVRAGVLS 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +PKGQ +A+ GL++ Q + +ILPQ + ++F+S++K TS+A+ I + E+ + Sbjct: 122 LPKGQMEAARGSGLSQVQAMSFVILPQALRNMIPSFVNQFVSLIKDTSLAAIIGVNELLR 181 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYII 209 T Q++++ Y I+ +A +Y I+ CY + Sbjct: 182 TGQQVMNRDYVTTEIFVTIAVMYFIV---CYAL 211 >gi|298486824|ref|ZP_07004880.1| Amino acid ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158691|gb|EFH99755.1| Amino acid ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 227 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 81/143 (56%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + RG LV LF +F+ LP GI ++ L L FSAY +EIIRS++I++ +G Sbjct: 63 YVEVLRGISALVLLFYLFFILPLFGIRLSPMTTGVLGLGLTFSAYGAEIIRSALINVSQG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q DA A+ R IILPQ + P ++ + +LK+TS+ S IT+ ++ T + Sbjct: 123 QRDAVRALDFGPISAFRRIILPQALPFMIPPTGNQLVELLKTTSLVSLITLTDLTFTGSQ 182 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 +++T Q +I+ + Y ++T Sbjct: 183 LITTLGQQTLIWSIVLVCYFVMT 205 >gi|320324765|gb|EFW80839.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] Length = 225 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 49/142 (34%), Positives = 81/142 (57%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + RG LV LF +F+ LP GI ++ L L FSAY +EIIRS++I++ +G Sbjct: 61 YVEVLRGISALVLLFYLFFILPLFGIRLSPMTTGVLGLGLTFSAYGAEIIRSALINVSQG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q DA A+ R IILPQ + P+ ++ + +LK+TS+ S IT+ ++ T + Sbjct: 121 QRDAVRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQ 180 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 +++T Q +I+ + Y ++ Sbjct: 181 LITTLGQQTLIWSIVLVCYFVM 202 >gi|116248749|ref|YP_764590.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115253399|emb|CAK11787.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 219 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 98/184 (53%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I VT+ I+ ++ + I+G F+ + + + ++ L + Y I RGTP+LV + +Y Sbjct: 19 GIGVTVSISLLAILAGSILGVFVG-LALVYGGVVLRLAVRAYTDIIRGTPVLVLVLASYY 77 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 +G+ F A +++L + S+++ EI+R ++ +IPKGQ +A+ AIGLT QT + Sbjct: 78 VSAAVGLDLGPFSAGVLALAIFCSSHVGEIVRGALQAIPKGQTEAAKAIGLTFTQTFTSV 137 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 + PQ + + ++K++++ S I + E+ Q I+S + L Y +Y Sbjct: 138 LWPQAMRQCLPAWVNTAAEMVKASTLLSVIGVAELLLRTQEIISRNFMSLQFYFLAGGLY 197 Query: 200 LILT 203 I+ Sbjct: 198 FIIN 201 >gi|37525273|ref|NP_928617.1| glutamate/aspartate transport system permease protein GltJ [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784700|emb|CAE13600.1| Glutamate/aspartate transport system permease protein GltJ [Photorhabdus luminescens subsp. laumondii TTO1] Length = 246 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 102/180 (56%), Gaps = 14/180 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L A VT+ ++ +++I+ I+G ++R + I+S I YV +FR PL+VQ F+ Sbjct: 25 LIAGFQVTIALSICAWIIAFIVGSLFGILRTV-PNKILSGIGTCYVELFRNVPLIVQFFI 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F + F++ L L +A + E +R++I S+P+GQ Sbjct: 84 WYLVVPELLPEKIGLWFKTELDPNIQFFLSSTACLGLFTAARMCEQVRAAIQSLPRGQKA 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIIPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 >gi|259416063|ref|ZP_05739983.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Silicibacter sp. TrichCH4B] gi|259347502|gb|EEW59279.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Silicibacter sp. TrichCH4B] Length = 268 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 112/208 (53%), Gaps = 25/208 (12%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGTPLLVQ 73 L+ + +T+ + +SF + ++G +A+ +D+ ++ I FYV + RG P++V Sbjct: 44 LWRGVGITVFVTVVSFFSASVLGMALAL----GADSRWLVLRQICRFYVEVVRGVPIIVL 99 Query: 74 L----FVIFYGLPHIGIVFDSFVAI--------------IISLTLNFSAYISEIIRSSII 115 L FV+ L + SF+ + I++L + +SA+I+E+ R+ + Sbjct: 100 LLYVAFVLAPALVDLRNWLGSFIGLEEIRTRNFPLLWRAIVALMIAYSAFIAEVFRAGLQ 159 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+P+GQ +A+ A+GL Q R I+ PQ I T PL ++F++++K +S+ S + + +I Sbjct: 160 SVPEGQVEAAKALGLNCWQRFRFIVFPQAIRTILPPLGNDFVALVKDSSLVSVLGVLDIT 219 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 Q + ++ ++ Y +A +YL +T Sbjct: 220 QLGKVTAASNFRYFETYNMVALIYLAMT 247 >gi|107026286|ref|YP_623797.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116692525|ref|YP_838058.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|105895660|gb|ABF78824.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116650525|gb|ABK11165.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter ATP-binding protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 597 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 121/232 (52%), Gaps = 30/232 (12%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EWF P +L + + TL + + V ++G F+A+ R+ S ++S +VW Sbjct: 67 EWF-----LSPPVL-SGLARTLVLTLLGAVFGFVLGAFVALARLSRS-RLLSASAWTFVW 119 Query: 64 IFRGTPLLVQLFV----------IFYGLPHIGIV-FDS--------FVAIIISLTLNFSA 104 +FR PL+V L + + G+P IV FD+ F+A ++ LTLN +A Sbjct: 120 LFRSIPLIVLLLILNNLGYLYEHVRLGVPFTDIVWFDTPTTDLISPFLAAVLGLTLNHAA 179 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 + +E+IR I+++ +GQ +A+ A+GL R + I+LPQ + ++ IS+ K TS Sbjct: 180 FSAEVIRGGILAVDQGQLEAAAALGLPRGRQTSRIVLPQAMRAILPTAFNDLISLAKGTS 239 Query: 165 VASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 + + +PE+F T Q I + PL++ + YLI+ + IQ+++E Sbjct: 240 MVYVLAMPELFYTVQVIYRRNLEVIPLLMVATV--WYLIILTVLSAIQVQVE 289 >gi|330872825|gb|EGH06974.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 149 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 48/136 (35%), Positives = 80/136 (58%), Gaps = 2/136 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++ + LL A+ TL + I ++ + +G AV+R + + I YV + Sbjct: 7 FTPVLQNIDVLLRGALF-TLELTAIGTLLGVSLGIVGAVVRAWKIQPFAT-IFAIYVELI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP LVQLF IF+GLP +G+ + A ++++ +N AY +EIIR+ I +IPKGQ +AS Sbjct: 65 RNTPFLVQLFFIFFGLPSLGVQISEWQAAVLAMVINLGAYSTEIIRAGIQAIPKGQLEAS 124 Query: 126 YAIGLTRKQTIRHIIL 141 A+ + R + R+++L Sbjct: 125 AALAMNRYEAFRYVVL 140 >gi|329910724|ref|ZP_08275365.1| amino acid ABC transporter, permease protein [Oxalobacteraceae bacterium IMCC9480] gi|327546104|gb|EGF31167.1| amino acid ABC transporter, permease protein [Oxalobacteraceae bacterium IMCC9480] Length = 198 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 80/133 (60%), Gaps = 2/133 (1%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFY--GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 + + Y+ +FRGT LLVQLF +F+ LP + F ++ L LN AY +E++R ++ Sbjct: 27 VANIYIEVFRGTSLLVQLFWLFFVLPLPPFDVRLTPFSVAVLGLGLNIGAYGAEVMRGAL 86 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+P+GQ +A+ A+ ++ +I+LPQ + + P ++ I +LK TS+ S IT+ ++ Sbjct: 87 SSVPRGQIEAAVALNISPFHRFFNIVLPQALANAIPPSTNLLIELLKGTSLVSLITLADL 146 Query: 175 FQTAQRIVSTTYQ 187 A ++V T++ Sbjct: 147 TFRANQLVEATFR 159 >gi|37524240|ref|NP_927584.1| hypothetical protein plu0220 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36783663|emb|CAE12515.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 245 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 110/204 (53%), Gaps = 29/204 (14%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVW 63 L+ + L+ ++TL I+ + + S ++GF +A R D+ I+ ++ Y Sbjct: 9 QLLAPQYLGWLWQGFLITLWISACTVIASTLLGFVLAAAR----DSQLKILRWLVTAYTT 64 Query: 64 IFRGTPLLVQLF-------------VIFY-GLPH----IGIVFD----SFVAIIISLTLN 101 +FR TPLLVQLF V+F+ PH +G+ F+A I LTL Sbjct: 65 LFRNTPLLVQLFFWYFASGQILPQEVMFWLNTPHEINLLGLSLAWPSFEFLAGFIGLTLY 124 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 + +++E +R+ I I +GQ A++A+GLT Q +R+++LPQ + + PL ++++I+K Sbjct: 125 SAPFVAEELRAGIQGIGRGQKYAAHALGLTGWQAMRYVVLPQALKIATPPLLGQYMNIVK 184 Query: 162 STSVASTITIPEIFQTAQRIVSTT 185 ++S+ I + E+ ++++ + T Sbjct: 185 NSSLTMAIGVAELSYASRQVETET 208 >gi|332529803|ref|ZP_08405757.1| polar amino acid ABC transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] gi|332040824|gb|EGI77196.1| polar amino acid ABC transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] Length = 233 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 109/191 (57%), Gaps = 11/191 (5%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L DS ++ + +V+T+ + S V++L + +A+ S + L + Sbjct: 9 WLGLPADSALEV-WEGLVITVQLLAGSVVLALSLAVPLALAATSRSPWLARLSRGYGA-A 66 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSII 115 FRGTPLLVQLF+++YG+ V D+F +++L+LN +AY++E +R+ I+ Sbjct: 67 FRGTPLLVQLFLLYYGVSQFEAVRSSALWWLLEDAFYCGLLALSLNLAAYMAEDLRAGIL 126 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P GQ +A+ A+G++ Q R I+LP + L +E I+ LK+T++ STIT+ ++ Sbjct: 127 AVPIGQKEAALALGMSVHQVNRWIVLPTAWRIATPALGNEVIAQLKATALVSTITVLDLT 186 Query: 176 QTAQRIVSTTY 186 A+R+ + Y Sbjct: 187 GVARRLSTAAY 197 >gi|71735859|ref|YP_274486.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556412|gb|AAZ35623.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320328872|gb|EFW84871.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 225 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 49/142 (34%), Positives = 81/142 (57%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + RG LV LF +F+ LP GI ++ L L FSAY +EIIRS++I++ +G Sbjct: 61 YVEVLRGISALVLLFYLFFILPLFGIRLSPMTTGVLGLGLTFSAYGAEIIRSALINVSQG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q DA A+ R IILPQ + P+ ++ + +LK+TS+ S IT+ ++ T + Sbjct: 121 QRDAVRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQ 180 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 +++T Q +I+ + Y ++ Sbjct: 181 LITTLGQQTLIWSIVLVCYFVM 202 >gi|330820725|ref|YP_004349587.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia gladioli BSR3] gi|327372720|gb|AEA64075.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia gladioli BSR3] Length = 239 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 58/213 (27%), Positives = 112/213 (52%), Gaps = 12/213 (5%) Query: 1 MKYEWFN-----LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS 55 M +E F L+I +FP +TL +A S + S ++GF A I + + Sbjct: 2 MPWERFAGNLRYLLIGAFPDGPLGGAALTLVLAVASAIASGLLGF-AAGIALAMAGRAAR 60 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 + + + FR P+L+ +F ++ LP H+ + A++ +L+L AY++ + + Sbjct: 61 VPLLVVIGFFRAIPVLMLIFWTYFLLPILFHVDV--PGLAAVVCALSLIGGAYLAHSVHA 118 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I+++ QW A ++GLTR QT+R ++LPQ + A ++++S++K TS+A + + Sbjct: 119 GIVAVGDAQWQAGLSLGLTRWQTLREVVLPQAVRIMAPSFVNQWVSLVKDTSLAYIVGVN 178 Query: 173 EI-FQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 E+ F Q P+ ++ +AF+YL+L + Sbjct: 179 ELSFVATQVNNRLMVYPIPVFLFVAFLYLVLCT 211 >gi|307320838|ref|ZP_07600248.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306893548|gb|EFN24324.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] Length = 220 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 5/155 (3%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV 92 VI LI F + R YV + R TP+LV + ++ LP +G+ Sbjct: 37 VIGLITAFGLVSRRALLRKP-----AGLYVTVIRNTPILVLVLFSYFALPELGVRLGKIE 91 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 + + +L + AY++E+ R +I+IP GQ +A AIGLT Q II+P + + L Sbjct: 92 SFVATLAIYSGAYLAEVFRGGLIAIPPGQREAGLAIGLTEMQIRTSIIIPLMLRSVLPSL 151 Query: 153 SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 S IS+ K TS+A+ I +PE+ A++I T++ Sbjct: 152 GSTMISLFKDTSLAAAIAVPELTFEARKINVETFR 186 >gi|116619006|ref|YP_819377.1| ABC-type amino acid transport system, permease component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097853|gb|ABJ63004.1| amino acid ABC transporter membrane protein 2, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 219 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 105/193 (54%), Gaps = 21/193 (10%) Query: 9 IIDSFP----QLLYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHFY 61 I D+F Q L + +T+ ++ IS ++S I G I ++ RI + + I + Sbjct: 6 IFDAFTPQNVQYLLGGLGITVGVSIISVILSFIAGSIIGIVQFERIPYFSKFVGTINN-- 63 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 I R PLL+ +F +++ LP +GI F A +++++ S+ ++EI+R + SI +GQ Sbjct: 64 --IIRNLPLLLIIFFVYFALPKLGIHLPIFWATVVAMSTFESSMLAEIVRGGLESIDEGQ 121 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++ + A GLT QT+ +I+LPQ P+ S+ IS++K TS+A I + E+ Sbjct: 122 FEGARANGLTNIQTMIYIVLPQAYKKMIPPIISQLISLVKDTSLAMGIVLAEM------- 174 Query: 182 VSTTYQPLIIYCE 194 TY+ IIY + Sbjct: 175 ---TYRGQIIYAQ 184 >gi|172063855|ref|YP_001811506.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171996372|gb|ACB67290.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 225 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 103/201 (51%), Gaps = 14/201 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI---F 65 I+ ++ + A +VTL +A + + +++G A ++ + + + H + Sbjct: 3 ILMNYGAQIAAGALVTLELAVAALCVGMLLGIAGASAKL----SSLGWLRHATYALTNFL 58 Query: 66 RGTPLLVQLFVIFYGLPHI-------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 RG P + L + ++GL H+ IV F A +I+L + F AY SE+ R + I++P Sbjct: 59 RGIPEFLILLICYFGLSHLLNAQFDGAIVISPFSAGVIALAVVFGAYSSEMFRGAFIAVP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +A+ A G+TR QT+ ++ LPQ L++ + ++LK TS+ S + + ++ + A Sbjct: 119 AGQIEAARAYGMTRLQTLWYVRLPQAWRICLPSLNNMWQNLLKDTSLVSIVGLEDMLRKA 178 Query: 179 QRIVSTTYQPLIIYCELAFVY 199 T QP + Y + VY Sbjct: 179 NIAAQFTKQPFVFYVTVGIVY 199 >gi|302186712|ref|ZP_07263385.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. syringae 642] Length = 225 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 49/142 (34%), Positives = 81/142 (57%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + RG LV LF +F+ LP GI ++ L L FSAY +EIIRS++I++ +G Sbjct: 61 YVEVLRGISALVLLFYLFFILPLFGIRLSPMTTGVLGLGLTFSAYGAEIIRSALINVSQG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q DA A+ R IILPQ + P+ ++ + +LK+TS+ S IT+ ++ T + Sbjct: 121 QRDAVRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQ 180 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 +++T Q +I+ + Y ++ Sbjct: 181 LITTLGQQTLIWSIVLVCYFVM 202 >gi|293364950|ref|ZP_06611667.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] gi|307703201|ref|ZP_07640147.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus oralis ATCC 35037] gi|291316400|gb|EFE56836.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] gi|307623276|gb|EFO02267.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus oralis ATCC 35037] Length = 225 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 90/156 (57%), Gaps = 4/156 (2%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G F + ++ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAVGSFILAMVLGIFFGAMSTS-KRPLLRVLARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 FYGLP I I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYIS 136 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R IILPQ PL+++ ++++K+TS + I+ Sbjct: 137 AMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|257485080|ref|ZP_05639121.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289625714|ref|ZP_06458668.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646323|ref|ZP_06477666.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|289672939|ref|ZP_06493829.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. syringae FF5] gi|330869651|gb|EGH04360.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330890405|gb|EGH23066.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] gi|330982502|gb|EGH80605.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] gi|330987289|gb|EGH85392.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010993|gb|EGH91049.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 225 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 49/142 (34%), Positives = 81/142 (57%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + RG LV LF +F+ LP GI ++ L L FSAY +EIIRS++I++ +G Sbjct: 61 YVEVLRGISALVLLFYLFFILPLFGIRLSPMTTGVLGLGLTFSAYGAEIIRSALINVSQG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q DA A+ R IILPQ + P+ ++ + +LK+TS+ S IT+ ++ T + Sbjct: 121 QRDAVRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQ 180 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 +++T Q +I+ + Y ++ Sbjct: 181 LITTLGQQTLIWSIVLVCYFVM 202 >gi|325272613|ref|ZP_08138972.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Pseudomonas sp. TJI-51] gi|324102255|gb|EGB99742.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Pseudomonas sp. TJI-51] Length = 237 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 108/210 (51%), Gaps = 18/210 (8%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y WF D + QL + + +TL + S I + +AV R+ S+ ++ + + FY Sbjct: 12 YLWF----DGY-QL--SGVAMTLWLLVASIAIGGTLAVPLAVARVS-SNPLLRMPVWFYT 63 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFD----------SFVAIIISLTLNFSAYISEIIRS 112 ++FRGTPL +QL +++ G+ + +V D +++ LN AY +EI Sbjct: 64 YVFRGTPLYIQLLILYTGIYSLQVVRDQPTLDAFFREGMNCTLLAFALNTCAYTTEIFAG 123 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I + P G+ +A A G++ R IILP + S S+E I +L ST++A T T+P Sbjct: 124 AIRATPYGEIEAGRAYGMSTFTLYRRIILPSALRRSLPYYSNEVILMLHSTTLAFTATVP 183 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 ++ + A+ + S TY + A +Y ++ Sbjct: 184 DLLKVARDVNSATYSSFEAFGLAAVLYALM 213 >gi|260438223|ref|ZP_05792039.1| amino acid ABC transporter, permease protein [Butyrivibrio crossotus DSM 2876] gi|292809415|gb|EFF68620.1| amino acid ABC transporter, permease protein [Butyrivibrio crossotus DSM 2876] Length = 228 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 13/139 (9%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYI 106 I +VWI RGTPL++QL +IFY P G+V ++ F+A ++ +N++ Y Sbjct: 54 ITKIFVWIIRGTPLMIQLLIIFY-FP--GLVLNNPVWGGGESGRFMAAAVAFIINYACYF 110 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 SEI R I SIP GQ +A +G+ + Q + L Q I P+S+E I+++K TS+A Sbjct: 111 SEIYRGGIESIPVGQDEAGLVLGMKKSQIFFKVKLKQMIKRIVPPMSNEIITLVKDTSLA 170 Query: 167 STITIPEIFQTAQRIVSTT 185 I + EI Q + + Sbjct: 171 RIIALQEIIWAGQAFMKGS 189 >gi|322374750|ref|ZP_08049264.1| amino acid ABC transporter, permease protein [Streptococcus sp. C300] gi|321280250|gb|EFX57289.1| amino acid ABC transporter, permease protein [Streptococcus sp. C300] Length = 225 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 51/156 (32%), Positives = 90/156 (57%), Gaps = 4/156 (2%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G V+ I+ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAMVLGIIFGVLSTS-KHQILRILARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 FYGLP I I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHTIMISIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYIS 136 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R IILPQ PL+++ ++++K+TS + I+ Sbjct: 137 AMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|307306766|ref|ZP_07586507.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|306902057|gb|EFN32655.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 220 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 73/129 (56%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV + R TP+LV + ++ LP +G+ + + +L + AY++E+ R +I+IP Sbjct: 58 GLYVTVIRNTPILVLVLFSYFALPELGVRLGKIESFVATLAIYSGAYLAEVFRGGLIAIP 117 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +A AIGLT Q II+P + + L S IS+ K TS+A+ I +PE+ A Sbjct: 118 PGQREAGLAIGLTEMQIRTSIIIPLMLRSVLPSLGSTMISLFKDTSLAAAIAVPELTFEA 177 Query: 179 QRIVSTTYQ 187 ++I T++ Sbjct: 178 RKINVETFR 186 >gi|260769493|ref|ZP_05878426.1| probable amino acid ABC transporter permease protein [Vibrio furnissii CIP 102972] gi|260614831|gb|EEX40017.1| probable amino acid ABC transporter permease protein [Vibrio furnissii CIP 102972] Length = 239 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 64/217 (29%), Positives = 115/217 (52%), Gaps = 13/217 (5%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P LL A + TL I IS ++ ++ ++++RI S + + +++ FRGTPL+ Q Sbjct: 10 PMLLDGAWM-TLKITFISVSLAALLALPMSLLRIQCSR-VYRWPVQWFISFFRGTPLIAQ 67 Query: 74 LFVIFYG-------LPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 LF+++YG L +G+ D F +++ T N AY +EI+R +I S+ G+ + Sbjct: 68 LFLLYYGSGQFRPWLMEMGLWHFFRDPFNCALLAFTFNSLAYQTEILRGAIQSVDAGEIE 127 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++G+ RHI+LP + L +E I +LK +VAS IT+ ++ +R S Sbjct: 128 AAKSMGMNNSLLYRHIVLPLAYRIAFPALGNECILMLKGGAVASVITVMDLMGQTRRAFS 187 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T+ + Y A +YLI+ + + + E + +H Sbjct: 188 QTFD-ISTYFLAAGLYLIIATVFVMAWRQAERYLYRH 223 >gi|78186725|ref|YP_374768.1| amino acid ABC transporter permease [Chlorobium luteolum DSM 273] gi|78186899|ref|YP_374942.1| amino acid ABC transporter permease [Chlorobium luteolum DSM 273] gi|78166627|gb|ABB23725.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Chlorobium luteolum DSM 273] gi|78166801|gb|ABB23899.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Chlorobium luteolum DSM 273] Length = 508 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 15/199 (7%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+++++ QL+ TL I+ S ++ + G + +R+ + I+ + ++ + R Sbjct: 289 NILLENRWQLILEGFRTTLVISVFSALLGTLFGALVCFMRMSRLN-ILRVSAGVFISLLR 347 Query: 67 GTPLLVQLFVIFYGLPHIGIVF-----DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 GTP+LV L ++FY +VF D + +I+ LNF+AY +EI R+ I I +GQ Sbjct: 348 GTPVLVLLMLVFY------VVFASVNIDPVLVAVIAFGLNFAAYSAEIFRAGIEGIDRGQ 401 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A A+G T T I+LPQT+ EFIS++K TS+ I + ++ + I Sbjct: 402 TEAGIAMGFTGPATFYFIVLPQTLQRILPVYKGEFISLVKMTSIVGYIAVQDLTKAGDII 461 Query: 182 VSTTYQ---PLIIYCELAF 197 S T+ PLI+ L F Sbjct: 462 RSRTFDAFFPLIMVAALYF 480 >gi|16264463|ref|NP_437255.1| putative amino acid uptake ABC transporter permease protein [Sinorhizobium meliloti 1021] gi|15140600|emb|CAC49115.1| ABC transporter, permease [Sinorhizobium meliloti 1021] Length = 228 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 73/129 (56%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 YV + R TP+LV + ++ LP +G+ + + +L + AY++E+ R +I+IP Sbjct: 66 GLYVTVIRNTPILVLVLFSYFALPELGVRLGKIESFVATLAIYSGAYLAEVFRGGLIAIP 125 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +A AIGLT Q II+P + + L S IS+ K TS+A+ I +PE+ A Sbjct: 126 PGQREAGLAIGLTEMQIRTSIIIPLMLRSVLPSLGSTMISLFKDTSLAAAIAVPELTFEA 185 Query: 179 QRIVSTTYQ 187 ++I T++ Sbjct: 186 RKINVETFR 194 >gi|330939242|gb|EGH42645.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] Length = 225 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 49/142 (34%), Positives = 81/142 (57%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + RG LV LF +F+ LP GI ++ L L FSAY +EIIRS++I++ +G Sbjct: 61 YVEVLRGISALVLLFYLFFILPLFGIRLSPMTTGVLGLGLTFSAYGAEIIRSALINVSQG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q DA A+ R IILPQ + P+ ++ + +LK+TS+ S IT+ ++ T + Sbjct: 121 QRDAVRALDFGPISAFRQIILPQALPFMIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQ 180 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 +++T Q +I+ + Y ++ Sbjct: 181 LITTLGQQTLIWSIVLVCYFVM 202 >gi|222832612|gb|EEE71089.1| ABC transporter family protein [Populus trichocarpa] Length = 465 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 101/187 (54%), Gaps = 3/187 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ +S VI+L++G I +R I + + +V +FR PLLV +F+ ++ +P Sbjct: 81 TISVSLLSLVIALVVGSLIGTLRTLEGRPWIVRLGNAWVELFRNIPLLVHIFMWYHVVPS 140 Query: 84 IGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 S FV ++++L SA I+E +RS I ++P+GQ A A+G T Q R+++ Sbjct: 141 FVPALKSLPGFVLVVLALGFFTSARIAEQVRSGIQALPRGQRYAGMAMGFTTFQYYRYVL 200 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LP PL+SE +++ K++SVA +++ E+ A + T + + IY + + Sbjct: 201 LPMAFRIIIPPLTSETMNVFKNSSVAFAVSVAELTMFAMQAQEETSRGIEIYLAVTGLNF 260 Query: 201 ILTSFCY 207 +L + Sbjct: 261 VLKGLYF 267 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 5/185 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 +L + I+ + ++ G +A++R+ + + YV R PL++ + F +P Sbjct: 268 SLTLTVIATIGGVLFGTVLALMRLS-GKKWLDVPATLYVNGMRSVPLVMVILWFFLLMPL 326 Query: 84 I-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 I G + V+ II+ +AY SEI+R+ I SIP+GQ A A+G+T Q +R ++LP Sbjct: 327 IIGRPIGAEVSAIITFIAFEAAYFSEIMRAGIQSIPRGQVSAGQAMGMTYGQNMRLVVLP 386 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q L ++ I + + TS+ I ++ + + +P+ Y Y +L Sbjct: 387 QAFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFEVAGKNYGRPIESYLAAGVTYFVL 446 Query: 203 TSFCY 207 CY Sbjct: 447 ---CY 448 >gi|241113593|ref|YP_002973428.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861801|gb|ACS59467.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 219 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 98/184 (53%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I VT+ I+ ++ + I+G F+ + + + ++ L + Y I RGTP+LV + +Y Sbjct: 19 GIGVTVSISLLAILAGSILGVFVG-LALVYGGVVLRLAVRAYTDIIRGTPVLVLVLASYY 77 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 +G+ F A +++L + S+++ EI+R ++ +IPKGQ +A+ AIGLT QT + Sbjct: 78 VSAAVGLDLGPFSAGVLALAVFCSSHVGEIVRGALQAIPKGQTEAAKAIGLTFTQTFTSV 137 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 + PQ + + ++K++++ S I + E+ Q I+S + L Y +Y Sbjct: 138 LWPQAMRQCLPAWVNTAAEMVKASTLLSVIGVAELLLRTQEIISRNFMSLQFYFLAGGLY 197 Query: 200 LILT 203 I+ Sbjct: 198 FIIN 201 >gi|146309285|ref|YP_001189750.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina ymp] gi|145577486|gb|ABP87018.1| amino acid ABC transporter membrane protein 1, PAAT family [Pseudomonas mendocina ymp] Length = 231 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 84/154 (54%), Gaps = 11/154 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYG-----------LPHIGIVFDSFVAIIISLTLNFSAYISEI 109 Y I RG P L+ + +I++G L + +F A I+L L F AY +E+ Sbjct: 55 YSTIVRGVPELLWVLLIYFGTVGLMRSLADLLGVASLELSAFAAGTIALGLCFGAYATEV 114 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +I++IPKG +A A+G+++ + + +ILPQ + L + F+ ++K T++ S I Sbjct: 115 FRGAILAIPKGHREAGMALGMSKGRILWKLILPQMWRIALPGLGNLFMILMKDTALVSVI 174 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + EI + +Q V+ + +P Y AF+YL LT Sbjct: 175 GLEEIMRRSQIAVTASKEPFTFYMVAAFIYLGLT 208 >gi|150376684|ref|YP_001313280.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150031231|gb|ABR63347.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 220 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 48/158 (30%), Positives = 85/158 (53%), Gaps = 3/158 (1%) Query: 33 VISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+++++G I +I F + FYV R TP+LV + ++ LP +G+ Sbjct: 29 VVAIVVGCMIGLITAFGLVSKSVALRKPAGFYVTAIRNTPILVLVLFSYFALPELGVRLG 88 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 + +++L + AY++E+ R +I+IP GQ +A AIGLT Q I +P + + Sbjct: 89 KIESFVLTLAIYSGAYLAEVFRGGLIAIPPGQREAGLAIGLTEMQIRTSITIPLMLRSVL 148 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 L S IS+ K TS+A+ I +PE+ A++I +++ Sbjct: 149 PSLGSTIISLFKDTSLAAAIAVPELTFEARKINVESFR 186 >gi|330862546|emb|CBX72701.1| hypothetical protein YEW_JG40490 [Yersinia enterocolitica W22703] Length = 163 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 76/127 (59%), Gaps = 5/127 (3%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH----FYVWIFRGT 68 P+LL + +++T+ + I+ + + +G A IR + + +I+ YV I R T Sbjct: 14 LPELL-SGLLITIELTAIATLGGIALGIVGAAIRCSHTSRLDKVILRRVWGGYVEIVRNT 72 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P +VQLF I +GLP +G+ + A ++++T+N AY +EIIR+ I + KGQW+A + Sbjct: 73 PFVVQLFFIVFGLPALGLKLSAGQAAVLAMTINLGAYSTEIIRAGIQASAKGQWEAGRVL 132 Query: 129 GLTRKQT 135 GL+R QT Sbjct: 133 GLSRSQT 139 >gi|220904828|ref|YP_002480140.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869127|gb|ACL49462.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 249 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 62/190 (32%), Positives = 101/190 (53%), Gaps = 22/190 (11%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N +ID F L AA+ V C +++++ I+G F ++R S + + + YV IFR Sbjct: 23 NWLIDGF--LTTAALFV-----C-AWIVAFIVGSFFGILRTLPSKALRT-VGATYVAIFR 73 Query: 67 GTPLLVQLFVIFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSS 113 PL+VQ F+ + P I + F S F+ +L L A + E +RS Sbjct: 74 NIPLIVQFFIWYLAAPDLLPRDISVWFKSELNPNAQFFILSTCALGLFTGARVCEQVRSG 133 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I+++ +GQ A A+GLT QT H++LP PL+SE ++++K+T+VASTI + E Sbjct: 134 ILALSRGQRYAGLALGLTLPQTYVHVLLPNAYRIITPPLTSEMLNMVKNTAVASTIGLVE 193 Query: 174 IFQTAQRIVS 183 + A R++ Sbjct: 194 LTSQANRLLE 203 >gi|170696122|ref|ZP_02887257.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170138937|gb|EDT07130.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 246 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 100/182 (54%), Gaps = 24/182 (13%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL------ 81 AC+S V + ++GF +A+ RI ++ YV +FR +PLLVQL ++G Sbjct: 28 ACVS-VCATLLGFGLAMARIA-QHRAVATAAKLYVLVFRNSPLLVQLLFWYFGAATLLPS 85 Query: 82 --------PHI------GIVFDSF--VAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 PH+ + + SF A + LT +A+I+E R+ I + Q+ AS Sbjct: 86 AWMTWLNTPHVLSAGPFALHWPSFELFAGWLGLTCYSTAFIAEEFRAGIRGVGIAQYQAS 145 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G+TR T+RH++LPQ + + PL+ ++++I+K++S+ I + E+ ++++ + + Sbjct: 146 AALGMTRYATLRHVVLPQAVRIATPPLAGQYMNIVKNSSLTMAIGVAELSYASRQVDTES 205 Query: 186 YQ 187 ++ Sbjct: 206 FR 207 >gi|170738225|ref|YP_001779485.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169820413|gb|ACA94995.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 597 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 121/232 (52%), Gaps = 30/232 (12%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EWF P +L + + TL + + V ++G F+A+ R+ S ++S +VW Sbjct: 67 EWF-----LSPPVL-SGLARTLVLTLLGAVFGFVLGAFVALARLSRS-RLLSASAWTFVW 119 Query: 64 IFRGTPLLVQLFV----------IFYGLPHIGIV-FDS--------FVAIIISLTLNFSA 104 +FR PL+V L + + G+P IV FD+ F+A ++ LTLN +A Sbjct: 120 LFRSIPLIVLLLILNNLGYLYEHVRLGVPFTDIVWFDTPTTDLISPFLAAVLGLTLNHAA 179 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 + +E+IR I+++ +GQ +A+ A+GL R + I+LPQ + ++ IS+ K TS Sbjct: 180 FSAEVIRGGILAVDQGQLEAAAALGLPRGRQTSRIVLPQAMRAILPTAFNDLISLAKGTS 239 Query: 165 VASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 + + +PE+F T Q I + PL++ + YLI+ + IQ+++E Sbjct: 240 MVYVLAMPELFYTVQVIYRRNLEVIPLLMVATV--WYLIILTVLSAIQVQVE 289 >gi|94987159|ref|YP_595092.1| ABC-type amino acid transport system, permease component [Lawsonia intracellularis PHE/MN1-00] gi|94731408|emb|CAJ54771.1| ABC-type amino acid transport system, permease component [Lawsonia intracellularis PHE/MN1-00] Length = 232 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 67/217 (30%), Positives = 120/217 (55%), Gaps = 7/217 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+II++ P + ++V T+ ++ I LI+G +A+++++ I + Y W FR Sbjct: 13 NIIIEALPNIFQGSLV-TIITVLLALFIGLILGIPMAILQVY-GPPYIRYSIQIYCWFFR 70 Query: 67 GTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 G P+L+ LF+ ++GL + + F + I L + S+Y ++IIRS+I IP GQ A+ Sbjct: 71 GVPILLLLFLFYFGLFELLQLNFSAVTTSCIVLGIASSSYQTQIIRSAIQMIPSGQLKAA 130 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G+T Q I IILPQ + S S+E+ +LK +++ + PEI Q + S T Sbjct: 131 KALGMTSTQAILVIILPQALRLSIPGWSNEYSILLKDSAICFVLGTPEIMAQTQFVASRT 190 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 Y+ L++Y +Y ++T +I + + + Q+ Y Sbjct: 191 YEHLLLYIVAGILYFLIT----LIGVSLLRRLEQYLY 223 >gi|116496268|ref|YP_808002.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei ATCC 334] gi|191639796|ref|YP_001988962.1| Glutamine-binding protein / Glutamine transport system permease protein [Lactobacillus casei BL23] gi|227532736|ref|ZP_03962785.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239630724|ref|ZP_04673755.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|116106418|gb|ABJ71560.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus casei ATCC 334] gi|190714098|emb|CAQ68104.1| Glutamine-binding protein / Glutamine transport system permease protein [Lactobacillus casei BL23] gi|227189570|gb|EEI69637.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239527007|gb|EEQ66008.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|327383908|gb|AEA55384.1| Arginine/histidine ABC superfamily ATP binding cassette transporter permease [Lactobacillus casei LC2W] gi|327387089|gb|AEA58563.1| Arginine/histidine ABC superfamily ATP binding cassette transporter permease [Lactobacillus casei BD-II] Length = 486 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 97/181 (53%), Gaps = 2/181 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + T+ + ++ + ++G + ++ + + + +++IFRG PLLV Sbjct: 284 LMGGLKETMIVTIVAIFFATVVGILVGLLGVL-PNQFARGVATTFIYIFRGLPLLVLALF 342 Query: 77 IFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+ G+P IG +FVA II+LTLN AY + ++ I ++ GQ +A+ ++GL + Sbjct: 343 IYTGVPSLIGSKIPAFVAGIITLTLNEGAYTAAFVKGGIQAVDDGQMEAARSLGLPFGKA 402 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R +ILPQ I ++FI LK TS+ S I I E+ QT + I++ + I+ + Sbjct: 403 MRRVILPQGIKIMIPSFINQFIITLKDTSILSIIGILELTQTGKIIIARNMEGFKIWTMV 462 Query: 196 A 196 A Sbjct: 463 A 463 >gi|306822263|ref|ZP_07455644.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium dentium ATCC 27679] gi|309802814|ref|ZP_07696916.1| amino acid ABC transporter, permease family protein [Bifidobacterium dentium JCVIHMP022] gi|304554425|gb|EFM42331.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium dentium ATCC 27679] gi|308220567|gb|EFO76877.1| amino acid ABC transporter, permease family protein [Bifidobacterium dentium JCVIHMP022] Length = 230 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 66/210 (31%), Positives = 109/210 (51%), Gaps = 13/210 (6%) Query: 5 WFNL--IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 +FNL ++FP LL A + TL I S +I + IG + + + +LI YV Sbjct: 4 YFNLSAFFNAFPILL-ARLPYTLGIVLASVLIGMFIGTLLTCLGRIHNRMAKTLITA-YV 61 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVF-------DSFVAIIISLTLNFSAYISEIIRSSII 115 W+ RGTPLL+ LF+ +YGLP + F D + +I+ +L+ SA+ E +R+ Sbjct: 62 WLMRGTPLLLLLFISYYGLPMLLSAFGVDINSSDPLIFALIAFSLSLSAFFEETLRAGFD 121 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +I GQ A+ ++ L + R II+PQ + S +S I+ +K +S+ TI I +I+ Sbjct: 122 AINNGQLQAAQSLSLPKLTYYRRIIIPQALINSLPNFASLLITAIKQSSILFTIGIMDIY 181 Query: 176 QTAQRIVSTTYQ--PLIIYCELAFVYLILT 203 + A + + + L I+ L +Y IL Sbjct: 182 EKAITLSAEDFGLWQLEIFLALMLIYWILA 211 >gi|227530660|ref|ZP_03960709.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] gi|227349441|gb|EEJ39732.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] Length = 219 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 74/131 (56%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 +++ YV + R TPLL+QLF ++Y P +GI + II L AY++E Sbjct: 52 VLNVYVDVARNTPLLIQLFFLYYAFPVMGIKMTAETCGIIGLIFLGGAYMAEGFTGGFNG 111 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + + Q DA A+G+ + Q R++ILPQ ++ S L++ I ++K TS+ S I IPE+ Sbjct: 112 VSQTQIDAGEALGMNQYQLARYVILPQGLSLSVPALAANIIFLIKETSIFSVIAIPELTN 171 Query: 177 TAQRIVSTTYQ 187 TA ++ Y+ Sbjct: 172 TALDLIGMYYR 182 >gi|301067875|ref|YP_003789898.1| amino acid ABC transporter/signal transduction system periplasmic protein [Lactobacillus casei str. Zhang] gi|300440283|gb|ADK20049.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus casei str. Zhang] Length = 474 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 97/181 (53%), Gaps = 2/181 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + T+ + ++ + ++G + ++ + + + +++IFRG PLLV Sbjct: 272 LMGGLKETMIVTIVAIFFATVVGILVGLLGVL-PNQFARGVATTFIYIFRGLPLLVLALF 330 Query: 77 IFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+ G+P IG +FVA II+LTLN AY + ++ I ++ GQ +A+ ++GL + Sbjct: 331 IYTGVPSLIGSKIPAFVAGIITLTLNEGAYTAAFVKGGIQAVDDGQMEAARSLGLPFGKA 390 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R +ILPQ I ++FI LK TS+ S I I E+ QT + I++ + I+ + Sbjct: 391 MRRVILPQGIKIMIPSFINQFIITLKDTSILSIIGILELTQTGKIIIARNMEGFKIWTMV 450 Query: 196 A 196 A Sbjct: 451 A 451 >gi|17546823|ref|NP_520225.1| amino-acid transmembrane ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17429123|emb|CAD15811.1| probable amino-acid transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 248 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 74/132 (56%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV R TP L+QL +F+GLP +G+ + + A +++ +N AYI+EI+R+ I P+G Sbjct: 60 YVEAIRNTPFLIQLMFVFFGLPSLGLQINEWQAALLTTVVNLGAYITEIVRAGIQETPRG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+ ++R RH++L + LSS+ + ++ TSV S I ++ A Sbjct: 120 QLEAASALAMSRWTCFRHVVLRPALQKVWPALSSQIVIVMLGTSVVSQIAAQDLTFAANF 179 Query: 181 IVSTTYQPLIIY 192 I S ++ Y Sbjct: 180 IQSRNFRAFETY 191 >gi|89897021|ref|YP_520508.1| hypothetical protein DSY4275 [Desulfitobacterium hafniense Y51] gi|219667106|ref|YP_002457541.1| polar amino acid ABC transporter inner membrane subunit [Desulfitobacterium hafniense DCB-2] gi|89336469|dbj|BAE86064.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219537366|gb|ACL19105.1| polar amino acid ABC transporter, inner membrane subunit [Desulfitobacterium hafniense DCB-2] Length = 215 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 113/213 (53%), Gaps = 13/213 (6%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L ++ TL IA ++ V+S ++G + + R + + I++ + Y+ + R PLL L Sbjct: 11 RFLAEGLMTTLYIAGMTIVLSFVVGTILGIAR-YSKNPILAPLAAIYIEVVRNIPLL--L 67 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F++ + + A I+++T+ SA I+E++R + SI KGQW+A+ + GL+ Q Sbjct: 68 FILMF---RFMTRLEPVNAGILAMTVFTSAIIAEVVRGGLNSIDKGQWEAAKSQGLSYVQ 124 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV-----STTYQPL 189 +R+IILPQ + PL S+FI+++K TS + I E+ T + ++ +T Q Sbjct: 125 ILRYIILPQALRKMIPPLVSQFITVVKDTSYVWAVGIEEL--TGKGLIIMGQFGSTPQVF 182 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 ++ +A Y +L +I ++ +Y Sbjct: 183 TLFGMIALTYFVLNYALSVIARNQQARSAMQSY 215 >gi|121601743|ref|YP_988905.1| amino acid ABC transporter, permease protein [Bartonella bacilliformis KC583] gi|120613920|gb|ABM44521.1| amino acid ABC transporter, permease protein [Bartonella bacilliformis KC583] Length = 240 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 49/158 (31%), Positives = 93/158 (58%), Gaps = 12/158 (7%) Query: 64 IFRGTPLLVQLFVIFYGLP----------HIGIVF--DSFVAIIISLTLNFSAYISEIIR 111 IFRG P L+ LF++++GL I + F ++F+A +++L++ F+A+ EI Sbjct: 65 IFRGLPELLILFLVYHGLQSLIQTVLDYLKIEMTFSINAFIASVLALSMVFAAFSCEIWI 124 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S++ KGQ++A+ A+G + T I+ PQ I + LS+ ++++LK TS+ STI++ Sbjct: 125 SALKVFNKGQYEAAKALGFSSSTTFFRIVFPQLIRNALPGLSNNWLTLLKDTSLVSTISL 184 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYII 209 ++ + VS T +P++ Y +YL+ ++F +I Sbjct: 185 VDLMRQTNLAVSATGKPMLFYLVACLLYLLFSAFSSLI 222 >gi|91779034|ref|YP_554242.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91691694|gb|ABE34892.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia xenovorans LB400] Length = 214 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 9/163 (5%) Query: 31 SFVISLIIGFFIAVIR----IFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 S V+ + +G +A+IR F + +I+ YV + R P + +IF+ LP GI Sbjct: 23 SIVLGVPLGLGLALIRWARVPFLNRVVIA-----YVSLIRSCPAVTLTLLIFFALPQFGI 77 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 D A I++LT++ +A+ EI R+++++ P+ Q+DA+ A + R R I LPQ Sbjct: 78 SLDPTPAAILALTISTAAFNCEIWRAALMNFPRDQYDAALAFAMPRALRFRRIALPQIWR 137 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 S L +E +KST + I I EI + A R+ + TY PL Sbjct: 138 ASLPGLVNEMTLQIKSTPAVAVIGIVEITRAALRVGARTYDPL 180 >gi|49082046|gb|AAT50423.1| PA2925 [synthetic construct] Length = 238 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 18/201 (8%) Query: 7 NLIIDSFPQ-------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 N ++D + Q L + +TL + ++ + ++ +AV R + ++ + Sbjct: 2 NAVLDEYWQAYLWTDGLQLTGLAMTLWLLILAVALGFLLAIPLAVARTC-GNPLLRYPVW 60 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVF----------DSFVAIIISLTLNFSAYISEI 109 Y ++FRGTPL +QL + G+ + + D F +++ LN AY++EI Sbjct: 61 LYTYVFRGTPLYIQLLFFYTGVYSLNAIRAQDFLNAFFRDGFNCTVLAFVLNTCAYMTEI 120 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 +I + P G+ +A+ A G+ R I+LP + + S+E I +L STSVA T Sbjct: 121 FAGAIRNTPHGEVEAARAYGMGGFTLYRRIVLPSALRRALPYFSNEVILMLHSTSVAFTA 180 Query: 170 TIPEIFQTAQRIVSTTYQPLI 190 T+P++ + A+ + S TY P + Sbjct: 181 TVPDLLKVARDVNSATYAPFL 201 >gi|296388586|ref|ZP_06878061.1| histidine transport system permease HisM [Pseudomonas aeruginosa PAb1] Length = 237 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 18/201 (8%) Query: 7 NLIIDSFPQ-------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 N ++D + Q L + +TL + ++ + ++ +AV R + ++ + Sbjct: 2 NAVLDEYWQAYLWTDGLQLTGLAMTLWLLILAVALGFLLAIPLAVARTC-GNPLLRYPVW 60 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVF----------DSFVAIIISLTLNFSAYISEI 109 Y ++FRGTPL +QL + G+ + + D F +++ LN AY++EI Sbjct: 61 LYTYVFRGTPLYIQLLFFYTGVYSLNAIRAQDFLNAFFRDGFNCTVLAFVLNTCAYMTEI 120 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 +I + P G+ +A+ A G+ R I+LP + + S+E I +L STSVA T Sbjct: 121 FAGAIRNTPHGEVEAARAYGMGSFTLYRRIVLPSALRRALPYFSNEVILMLHSTSVAFTA 180 Query: 170 TIPEIFQTAQRIVSTTYQPLI 190 T+P++ + A+ + S TY P + Sbjct: 181 TVPDLLKVARDVNSATYAPFL 201 >gi|254248371|ref|ZP_04941691.1| ABC-type amino acid transport system, permease component [Burkholderia cenocepacia PC184] gi|124874872|gb|EAY64862.1| ABC-type amino acid transport system, permease component [Burkholderia cenocepacia PC184] Length = 597 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 121/232 (52%), Gaps = 30/232 (12%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EWF P +L + + TL + + V ++G F+A+ R+ S ++S +VW Sbjct: 67 EWF-----LSPPVL-SGLARTLVLTLLGAVFGFVLGAFVALARLSRS-RLLSASAWTFVW 119 Query: 64 IFRGTPLLVQLFV----------IFYGLPHIGIV-FDS--------FVAIIISLTLNFSA 104 +FR PL+V L + + G+P IV FD+ F+A ++ LTLN +A Sbjct: 120 LFRSIPLIVLLLILNNLGYLYEHVRLGVPFTDIVWFDTPTTDLISPFLAAVLGLTLNHAA 179 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 + +E+IR I+++ +GQ +A+ A+GL R + I+LPQ + ++ IS+ K TS Sbjct: 180 FSAEVIRGGILAVDQGQLEAAAALGLPRGRQTSRIVLPQAMRAILPTAFNDLISLAKGTS 239 Query: 165 VASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 + + +PE+F T Q I + PL++ + YLI+ + IQ+++E Sbjct: 240 MVYVLAMPELFYTVQVIYRRNLEVIPLLMVATV--WYLIILTVLSAIQVQVE 289 >gi|15598121|ref|NP_251615.1| histidine transport system permease HisM [Pseudomonas aeruginosa PAO1] gi|107102474|ref|ZP_01366392.1| hypothetical protein PaerPA_01003536 [Pseudomonas aeruginosa PACS2] gi|116050927|ref|YP_790249.1| histidine ABC transporter, inner membrane permease [Pseudomonas aeruginosa UCBPP-PA14] gi|218890876|ref|YP_002439742.1| histidine transport system permease HisM [Pseudomonas aeruginosa LESB58] gi|313108082|ref|ZP_07794241.1| histidine transport system permease HisM [Pseudomonas aeruginosa 39016] gi|9949019|gb|AAG06313.1|AE004718_10 histidine transport system permease HisM [Pseudomonas aeruginosa PAO1] gi|115586148|gb|ABJ12163.1| histidine ABC transporter, inner membrane permease [Pseudomonas aeruginosa UCBPP-PA14] gi|218771101|emb|CAW26866.1| histidine transport system permease HisM [Pseudomonas aeruginosa LESB58] gi|310880743|gb|EFQ39337.1| histidine transport system permease HisM [Pseudomonas aeruginosa 39016] Length = 237 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 18/201 (8%) Query: 7 NLIIDSFPQ-------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 N ++D + Q L + +TL + ++ + ++ +AV R + ++ + Sbjct: 2 NAVLDEYWQAYLWTDGLQLTGLAMTLWLLILAVALGFLLAIPLAVARTC-GNPLLRYPVW 60 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVF----------DSFVAIIISLTLNFSAYISEI 109 Y ++FRGTPL +QL + G+ + + D F +++ LN AY++EI Sbjct: 61 LYTYVFRGTPLYIQLLFFYTGVYSLNAIRAQDFLNAFFRDGFNCTVLAFVLNTCAYMTEI 120 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 +I + P G+ +A+ A G+ R I+LP + + S+E I +L STSVA T Sbjct: 121 FAGAIRNTPHGEVEAARAYGMGGFTLYRRIVLPSALRRALPYFSNEVILMLHSTSVAFTA 180 Query: 170 TIPEIFQTAQRIVSTTYQPLI 190 T+P++ + A+ + S TY P + Sbjct: 181 TVPDLLKVARDVNSATYAPFL 201 >gi|296156701|ref|ZP_06839539.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295893300|gb|EFG73080.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 214 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 9/163 (5%) Query: 31 SFVISLIIGFFIAVIR----IFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 S V+ + +G +A+IR F + +I+ YV + R P + +IF+ LP GI Sbjct: 23 SIVLGVPLGLGLALIRWARVPFLNRVVIA-----YVSLIRSCPAVTLTLLIFFALPQFGI 77 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 D A I++LT++ +A+ EI R+++++ P+ Q+DA+ A + R R I LPQ Sbjct: 78 SLDPTPAAILALTISTAAFNCEIWRAALMNFPRDQYDAALAFAMPRALRFRRIALPQIWR 137 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 S L +E +KST + I I EI + A R+ + TY PL Sbjct: 138 ASLPGLVNEMTLQIKSTPAVAVIGIVEITRAALRVGARTYDPL 180 >gi|317053432|ref|YP_004119199.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316953171|gb|ADU72643.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 243 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 109/221 (49%), Gaps = 19/221 (8%) Query: 1 MKYEW-----FNLIID---SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT 52 M Y W F++ +D S+ + L + T A +F I+L++G V+R S Sbjct: 1 MNYHWNWAAFFDVSLDGAHSWWETLVMGLGWTAATAVGAFAIALLLGSLAGVLRNLPSRG 60 Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNF 102 + + F V +FR PLL+Q+F+ ++ LP + F ++ L Sbjct: 61 LNGMGSAF-VEVFRNIPLLMQMFLWYFVLPEALPRAAGDWLKQLPNAQFYTAVLCLGCYH 119 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 A ++E++R+ + S+ KGQ A A+GLT QT R+++LP ++SEF+S K+ Sbjct: 120 GARMAEVVRAGLESLSKGQRMAGQALGLTLPQTYRYVLLPVAYRIVTPAITSEFLSCTKN 179 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 TSVA I + E+ +A+ + T+Q + +YL+L Sbjct: 180 TSVALAIGLIELTGSARAMQENTFQVFEAFSVATVLYLLLN 220 >gi|66046194|ref|YP_236035.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63256901|gb|AAY37997.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] Length = 225 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 49/142 (34%), Positives = 81/142 (57%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + RG LV LF +F+ LP GI ++ L L FSAY +EIIRS++I++ +G Sbjct: 61 YVEVLRGISALVLLFYLFFILPLFGIRLSPMTTGVLGLGLTFSAYGAEIIRSALINVSQG 120 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q DA A+ R IILPQ + P+ ++ + +LK+TS+ S IT+ ++ T + Sbjct: 121 QRDALRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQ 180 Query: 181 IVSTTYQPLIIYCELAFVYLIL 202 +++T Q +I+ + Y ++ Sbjct: 181 LITTLGQQTLIWSIVLVCYFVM 202 >gi|296106040|ref|YP_003617740.1| amino acid (glutamine) ABC transporter, permease [Legionella pneumophila 2300/99 Alcoy] gi|295647941|gb|ADG23788.1| amino acid (glutamine) ABC transporter, permease [Legionella pneumophila 2300/99 Alcoy] Length = 197 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 101/186 (54%), Gaps = 4/186 (2%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFD 89 +I +++G +++ R + +++ ++ I RGTPL++QL I++ +P +G+ Sbjct: 7 GMLIGVLLGTLLSICR---HQGVACFVINRFISILRGTPLILQLSFIYFAVPVLLGMRPS 63 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 VA I++ LN SAY +EI+R+ I S+PKGQ++A+ + + + IILPQ I Sbjct: 64 ILVAGIVAFGLNSSAYFAEILRAGIESLPKGQFEAALTLQIPTFYLWKDIILPQVIKNIF 123 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYII 209 + +E I++LK T++ STI ++ + AQ + + + + C F Y L + Sbjct: 124 PAMINEMIALLKETALISTIGGMDLMRQAQTLAAQQFTYFMPLCITGFYYYSLVLLLEAL 183 Query: 210 QIKIES 215 KIE Sbjct: 184 GKKIEK 189 >gi|293605796|ref|ZP_06688169.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292815791|gb|EFF74899.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 229 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 117/205 (57%), Gaps = 8/205 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIM 58 M+Y W L++ +P + +TL +A + ++S+ + IA+ R+ F + S + Sbjct: 6 MQY-WPTLLVGQYPNGPLGGLALTLILAALGLLMSMPLALLIALARVSPFGWLRVASKAL 64 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 V + RG PLL+ +F ++ +P + G V F +I +L + SAY+SE+IRS I ++ Sbjct: 65 ---VNVVRGMPLLMLIFWAYFVVPKLTGQVISGFWTLIFALVVYESAYLSEVIRSGIEAV 121 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P+GQ +AS ++G+ T+R ++LPQ + ++S+F+S +K TS+ I++ E+ Sbjct: 122 PRGQIEASRSLGVGYWTTMRKVVLPQALFNVLPSMTSQFVSTIKETSLGYVISVNELTFA 181 Query: 178 AQRIVSTTY-QPLIIYCELAFVYLI 201 A +I + QPL ++ LA +Y + Sbjct: 182 ANQINNLVLTQPLQVFGILAIIYFL 206 >gi|296129395|ref|YP_003636645.1| polar amino acid ABC transporter, inner membrane subunit [Cellulomonas flavigena DSM 20109] gi|296021210|gb|ADG74446.1| polar amino acid ABC transporter, inner membrane subunit [Cellulomonas flavigena DSM 20109] Length = 292 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 95/170 (55%), Gaps = 12/170 (7%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRG 67 D + LL + TL A ++ ++ ++G +AV R + + S I+ +FRG Sbjct: 67 DVWRSLLVLGLGATLRAAAVAAPLAFVLGLLLAVWRTTRFTAARGVASAIIE----LFRG 122 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 P+L+ +F +G + +F A++ LT+ A I+EI+R+ + S+PKGQ +A+YA Sbjct: 123 LPVLLMMFFAL-----LGFGWSAFAAVVFGLTVYNMAIIAEIVRAGLASLPKGQSEAAYA 177 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 +GL+R QT+R ++LPQ + T A L ++ + +LK +S+ + E+ Sbjct: 178 VGLSRGQTLRLVLLPQALRTMAPSLVAQLVVLLKDSSLGFIVGYAELLNA 227 >gi|167565679|ref|ZP_02358595.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia oklahomensis EO147] Length = 229 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 111/219 (50%), Gaps = 12/219 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 ++ F LL+A V T+ +A +S SL++G A ++ + +++ + FY + R Sbjct: 1 MLFQGFGPLLWAGTVETVKLAVLSLAASLVLGLAGAAAKLS-PNRVLAGVGTFYTTLIRA 59 Query: 68 TPLLVQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 P LV + ++FYG+ +G I D FVA I++L + AY +E R + ++ Sbjct: 60 VPDLVLMLLLFYGIQILLNDATDMLGVDQIDIDPFVAGIVTLGFIYGAYFTETFRGAFLA 119 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ +A +A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + Sbjct: 120 VPRGQLEAGFAYGMSSWRVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVK 179 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +Q +T +YL +T+ ++ + +E Sbjct: 180 ASQDAGKSTLNFFFFTLAAGAIYLAITTLSNLVLMYLEK 218 >gi|330500965|ref|YP_004377834.1| amino acid ABC transporter permease [Pseudomonas mendocina NK-01] gi|328915251|gb|AEB56082.1| amino acid ABC transporter, permease protein [Pseudomonas mendocina NK-01] Length = 219 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 49/162 (30%), Positives = 90/162 (55%), Gaps = 2/162 (1%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH--IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y+ IFRGT LLVQLF +++ LP + +F I+ L L+ AY +E++R +I S+ Sbjct: 51 YIEIFRGTSLLVQLFWLYFVLPMPPFNVEMSAFTVAIVGLGLHIGAYGAEVMRGAIRSVA 110 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ++A A+ + + IILPQ + + P ++ I +LK+TS+ S IT+ ++ A Sbjct: 111 KGQYEACTALNMRPSKRFMRIILPQALLAAIPPGTNLLIELLKNTSLVSLITLSDLAFRA 170 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +++ T+ L I+ +Y ++ + +E +++ Sbjct: 171 RQLDQATFMTLEIFALTLVLYFVMAQVINLGMRLLEKRLSRG 212 >gi|297517323|ref|ZP_06935709.1| glutamate/aspartate transport system permease GltJ [Escherichia coli OP50] Length = 195 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 99/168 (58%), Gaps = 14/168 (8%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ ++G F ++R + +S + YV +FR PL+VQ F Sbjct: 25 IWSGFQVTIALSICAWIIAFLVGSFFGILRTV-PNRFLSGLGTLYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F + F++ ++ L L +A + E +R++I S+P+GQ + Sbjct: 84 WYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 A+ A+GLT Q R+++LP P++SE ++++K++++ASTI + Sbjct: 144 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGL 191 >gi|183597012|ref|ZP_02958505.1| hypothetical protein PROSTU_00244 [Providencia stuartii ATCC 25827] gi|188023668|gb|EDU61708.1| hypothetical protein PROSTU_00244 [Providencia stuartii ATCC 25827] Length = 250 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 58/193 (30%), Positives = 103/193 (53%), Gaps = 29/193 (15%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS---LIMHFYVWIFRGTPLLVQLFV 76 ++TL I+ + + + ++GF +A R D+ I+ I+ YV +FR TPLLVQLF Sbjct: 27 GFLLTLWISICTIIAATLLGFVVAAAR----DSQIAPLRWIVGVYVSVFRNTPLLVQLFF 82 Query: 77 IFY--------------GLPH----IGIVFD----SFVAIIISLTLNFSAYISEIIRSSI 114 ++ PH G+ F+A I LTL +I+E IRS I Sbjct: 83 WYFASGEILSSDMMAWLNTPHEITFAGMALSWPSFEFLAGFIGLTLYTVPFIAEEIRSGI 142 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 + +GQ A++A+GLT Q ++H++LPQ + + PL ++++++K++S+ I + E+ Sbjct: 143 RGVRQGQKYAAFALGLTGWQAMKHVVLPQAVKIAMPPLLGQYMNVVKNSSLTMAIGVAEL 202 Query: 175 FQTAQRIVSTTYQ 187 ++++ S T Q Sbjct: 203 SYVSRQVESQTLQ 215 >gi|331266847|ref|YP_004326477.1| ABC transporter membrane-spanning permease,polar amino acid transport system; glutamine transport,putative [Streptococcus oralis Uo5] gi|326683519|emb|CBZ01137.1| ABC transporter membrane-spanning permease,polar amino acid transport system; glutamine transport,putative [Streptococcus oralis Uo5] Length = 225 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 51/156 (32%), Positives = 90/156 (57%), Gaps = 4/156 (2%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G V+ I+ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAMVLGIIFGVLSTS-KHQILRILARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 FYGLP I I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISEHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYIS 136 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R IILPQ PL+++ ++++K+TS + I+ Sbjct: 137 AMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|222102914|ref|YP_002539953.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221739515|gb|ACM40248.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 250 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 54/218 (24%), Positives = 116/218 (53%), Gaps = 3/218 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+I +P + TL ++ S ++ + +A+ R+ T+ + F V++ Sbjct: 13 WLLLLIGQYPNGPLGGLANTLILSVFSIALAFPLSILLALARMSKWRTL-RWPVTFLVYV 71 Query: 65 FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RG PLL+ + ++ +P + G SF+ ++ +L + S ++SE++RS I+++ GQ + Sbjct: 72 TRGVPLLMLILWCYFLVPLLTGADVPSFITMLTTLVVYQSCFLSEVVRSGIVALGHGQME 131 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+G + +R+++LPQ + + S F+S +K T++ S I +P++ A ++ + Sbjct: 132 AAKALGHSYPSAMRYVVLPQALYNVIPSILSTFVSTIKDTTLGSVINVPDLTFAANQVNN 191 Query: 184 TTY-QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 QP +Y LA +Y ++ ++E S+++ Sbjct: 192 DLLTQPFQVYLILALIYYVICWSLTHAAKRLEGSISRR 229 >gi|254248930|ref|ZP_04942250.1| ABC His/Glu/Gln/Arg/opine transporter, inner membrane subunit [Burkholderia cenocepacia PC184] gi|124875431|gb|EAY65421.1| ABC His/Glu/Gln/Arg/opine transporter, inner membrane subunit [Burkholderia cenocepacia PC184] Length = 243 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 52/220 (23%), Positives = 108/220 (49%), Gaps = 12/220 (5%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++I F LL+A V T+ +A +S SLI+G A ++ ++ ++ + FY + R Sbjct: 14 HMIFQGFGPLLWAGTVETVKLAVLSLAASLILGLAGAAAKLS-ANGVLKSVGTFYTTLIR 72 Query: 67 GTPLLVQLFVIFYG-----------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 P LV + ++FYG L I D F A +++L + AY +E R + + Sbjct: 73 AVPDLVLMLLLFYGIQILLNDVTDLLGWDQIDIDPFAAGVVTLGFIYGAYFTETFRGAFL 132 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P+GQ +A +A G++ + I+ PQ + + + + + ++K+T++ S I + ++ Sbjct: 133 AVPRGQLEAGFAYGMSGWRVFHRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVV 192 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + +Q +T +YL +T+ ++ +E Sbjct: 193 KASQDAGKSTLDFFFFTLAAGAIYLAITTVSNVVLHHLEK 232 >gi|304391887|ref|ZP_07373829.1| glutamate/glutamine/aspartate/asparagine transport system permease protein BztC [Ahrensia sp. R2A130] gi|303296116|gb|EFL90474.1| glutamate/glutamine/aspartate/asparagine transport system permease protein BztC [Ahrensia sp. R2A130] Length = 432 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 68/192 (35%), Positives = 102/192 (53%), Gaps = 6/192 (3%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV----IF 78 +T I V SL IG +A+ R T+ + + F +I RG PL+ LFV + Sbjct: 227 ITFIIGVTGIVASLPIGILLALGRGSDMPTLKMICVGFIEFI-RGVPLITLLFVASTLLN 285 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 Y LP G FD + +II +TL SAY++E+IR + ++PKGQ++A+ A+GL Q R Sbjct: 286 YFLPP-GTNFDIVLRVIIMVTLFASAYMAEVIRGGLAALPKGQYEAADALGLNYWQATRL 344 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 IILPQ + S + + FI + K T + S I I + Q I S+ II+ FV Sbjct: 345 IILPQALKISIPGIVNTFIGLFKDTVLVSIIGILDPIGIMQPIRSSAEWNGIIWELPIFV 404 Query: 199 YLILTSFCYIIQ 210 L+ FC+++ Sbjct: 405 GLVFFIFCFLMS 416 >gi|271501284|ref|YP_003334309.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270344839|gb|ACZ77604.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 229 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + +L+ +TL +A S V+SL+IG A ++ S ++S Y + RG P L Sbjct: 4 GYSELIMDGARMTLQLALCSLVLSLLIGLMGAAAKLS-SSRLLSGFFSGYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLPHI-----------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL + I D A II++ + AY +E R + +++P+G Sbjct: 63 VLMLLIFYGLQMVLNSITETLGVDQIDIDPMGAGIITVGFIYGAYFTETFRGAYLAVPRG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A G T + R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 QIEAAVAFGFTPMKVFRRIMFPSMMRFALPGIGNNWQVILKATALVSLLGLSDVIKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 T+ P +YL+ T+ + +E +Q V+ Sbjct: 183 AGKGTHHPFFFAIVAGVLYLVFTTLSNGVLWWLEKRYSQGVRKVN 227 >gi|332673969|gb|AEE70786.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Helicobacter pylori 83] Length = 217 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 102/187 (54%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + ++ S P L + +TL I+ ++SL++GF A+I ++F IS I++ Sbjct: 1 MALDW-DFMLHSIPMFL-KGLELTLYISFFGILLSLLVGFLCAII-LYFKTRFISPIVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QKESALSLGFGSLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQ 187 ++ Y+ Sbjct: 176 LIGIYYK 182 >gi|296110979|ref|YP_003621360.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii IMSNU 11154] gi|295832510|gb|ADG40391.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii IMSNU 11154] Length = 219 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 100/181 (55%), Gaps = 17/181 (9%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 L + +T+ ++ IS ++SLI G + +I R+ F + I + + R PLL+ Sbjct: 18 LLGGLGITVGVSVISVILSLIFGSVVGIIQFERLPFFSKFVGTINN----VIRNLPLLLI 73 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 +F +++ LP IGI F A +I+++ SA ++EI+R + S+ GQ++ + A GL+ Sbjct: 74 IFFVYFALPKIGIHLPIFWATVIAMSTFESAMLAEIVRGGLESVDIGQFEGARANGLSNM 133 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 QT+ +IILPQ P+ S+ IS++K TS+A I + E+ TY+ I+Y Sbjct: 134 QTMIYIILPQAYKRMIPPIISQLISLVKDTSLAMGIVLSEM----------TYRGQIVYA 183 Query: 194 E 194 + Sbjct: 184 Q 184 >gi|146284416|ref|YP_001174569.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] gi|145572621|gb|ABP81727.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] Length = 231 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 85/154 (55%), Gaps = 11/154 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIGIVFD-------SFVAIIISLTLNFSAYISEI 109 Y I RG P L+ + +I++G + +G +F F A I+L L F AY +E+ Sbjct: 55 YSTIVRGVPELLWVLLIYFGTINLIRGLGELFGIANLALSPFAAGTIALGLCFGAYATEV 114 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R ++++IPKG +A A+GL +++ +ILPQ + L + F+ ++K T++ S I Sbjct: 115 FRGALLAIPKGHREAGLALGLGKRRIFLRLILPQMWRLALPGLGNLFMILMKDTALVSVI 174 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + EI + +Q V+ + +P + AF+YL LT Sbjct: 175 GLEEIMRRSQIAVTASKEPFTFFLVAAFIYLCLT 208 >gi|91787396|ref|YP_548348.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91696621|gb|ABE43450.1| amino acid ABC transporter membrane protein 1, PAAT family [Polaromonas sp. JS666] Length = 220 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 56/198 (28%), Positives = 107/198 (54%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F +++ +P L+ +V+T+ + S + ++G A R+ + + YV + Sbjct: 6 FAVVLAQWPMLMRG-LVLTVALTASSAALGALLGTACAWARLHGGKALKRAVGS-YVELV 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP ++QLF IF+GLP +G+ +A ++++ LN AY EI+R+ + + P+GQ +A+ Sbjct: 64 RNTPFIIQLFFIFFGLPSLGLRLPVELACVLAMVLNLGAYACEIVRAGLQATPEGQLEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++ LT +QT H++LP + L S+ I ++ ++V I+ E+ Q A I S T Sbjct: 124 MSLALTPRQTFFHVVLPPALARIWPALVSQIIIVMLGSAVCGQISAEELSQAANLISSRT 183 Query: 186 YQPLIIYCELAFVYLILT 203 ++ Y + Y++L Sbjct: 184 FRSFESYIVVTVAYVLLA 201 >gi|312173031|emb|CBX81286.1| Histidine ABC transport system, inner membrane component [Erwinia amylovora ATCC BAA-2158] Length = 228 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 12/218 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + +++ +VTL +A S V ++++G A ++ S + ++ Y + RG P L Sbjct: 4 GYSDVIFKGALVTLELALSSVVFAVLLGLIGAAAKLSNSRPLAAM-SEVYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLP----HIGIVF-------DSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL + F D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNQLTDFFSFAQFDIDPMVAGIITLGFIYGAYFTETFRGAWMAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A G TR QT I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 QLEAATAFGFTRFQTFLRILFPAMMRFALPGIGNNWQVILKATALVSLLGLEDVVKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 +T+QP +YLI T+ + +E T Sbjct: 183 AGKSTWQPFWFAIVAGVIYLIFTTLSNGVLWWLERRYT 220 >gi|167748156|ref|ZP_02420283.1| hypothetical protein ANACAC_02900 [Anaerostipes caccae DSM 14662] gi|317472312|ref|ZP_07931640.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Anaerostipes sp. 3_2_56FAA] gi|167652148|gb|EDR96277.1| hypothetical protein ANACAC_02900 [Anaerostipes caccae DSM 14662] gi|316900269|gb|EFV22255.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Anaerostipes sp. 3_2_56FAA] Length = 225 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 113/204 (55%), Gaps = 16/204 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + VT+ IA ++ V+SLI G +I + + I+ + Y+ R P+LV LF+ Sbjct: 18 LMSGLAVTIKIALVAVVLSLIFGVIFGII-MTSKNLIVKAVCRLYLEAIRIIPILVWLFL 76 Query: 77 IFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 ++GL +GI + I+ T+ +A + +I+R ++ S+P+ Q ++ ++GLT+ Q Sbjct: 77 FYFGLTRAMGIHLEGEFISIVVFTMWGTAEMGDIVRGAVTSMPRHQTESGLSLGLTKLQI 136 Query: 136 IRHIILPQTITT---SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV-----STTYQ 187 R+I++PQT+ A+ L++ + K+TS+ I + E+ + Q+I+ +T Sbjct: 137 YRYILVPQTVRRVLPGAINLATRMV---KTTSLVVIIGVVEVLKVGQQIIEGGILNTPAA 193 Query: 188 PLIIYCELAFVYLILTSFCYIIQI 211 PL +Y + F+Y IL CY I I Sbjct: 194 PLWVYGFIFFLYFIL---CYPISI 214 >gi|71064881|ref|YP_263608.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ [Psychrobacter arcticus 273-4] gi|71037866|gb|AAZ18174.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ [Psychrobacter arcticus 273-4] Length = 248 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 61/190 (32%), Positives = 93/190 (48%), Gaps = 14/190 (7%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP---- 82 I I++ I+++IG ++R + T + I YV FR PLLVQLF FY P Sbjct: 35 IGSIAWAIAMVIGTIFGIMRTLPNKTARA-IGTTYVTFFRNIPLLVQLFFWFYIAPGWLT 93 Query: 83 ---------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 + + ++ I L L +A I E +R+ I S+PKGQ +A+YA+G + Sbjct: 94 PSIQEWWYKDLSPNTSAMLSASIGLGLFTAARIVEQVRTGIESLPKGQINAAYALGFSIP 153 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q + ++LPQ PLSSE + K+ SVAS + + E+ + I T L IY Sbjct: 154 QAYKEVLLPQAFRIILPPLSSELTNCFKNASVASLVGVMELISQTKTISEYTQNSLEIYT 213 Query: 194 ELAFVYLILT 203 +YL+ Sbjct: 214 YATIIYLVFN 223 >gi|301066996|ref|YP_003789019.1| amino acid ABC transporter permease [Lactobacillus casei str. Zhang] gi|300439403|gb|ADK19169.1| ABC-type amino acid transport system, permease component [Lactobacillus casei str. Zhang] Length = 214 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 5/182 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 TL + ++ + SLI+G A++ I F S +I I YV I R PLLV + + Sbjct: 19 TLASSILALIGSLIVGTLFALLEISPFKSLRVIGRI---YVEIVRNIPLLVITLAFYVIV 75 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 P + D F A I L + SA+I+E +R+ I ++P GQ + + +IG+T Q + II Sbjct: 76 PQFIVKIDGFTAGTIGLLIYTSAFIAETVRAGIEAVPGGQMEGARSIGMTYNQAMIQIIF 135 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ PL ++FI+++K++SV + + ++ + I +TT+ Y + YL+ Sbjct: 136 PQAFKMVIPPLGNQFINLVKNSSVLAFVAGFDLMYQGKLIAATTFSTFDTYLIVGIFYLV 195 Query: 202 LT 203 LT Sbjct: 196 LT 197 >gi|307130054|ref|YP_003882070.1| membrane protein of an ABC superfamily glutamate and aspartate transporter [Dickeya dadantii 3937] gi|306527583|gb|ADM97513.1| membrane component of an ABC superfamily glutamate and aspartate transporter [Dickeya dadantii 3937] Length = 246 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 102/178 (57%), Gaps = 14/178 (7%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VT+ ++ ++VI+ ++G + ++R + +++ I YV +FR PL+VQ F + Sbjct: 27 SGLQVTVTLSLCAWVIAFLLGSLLGILRTV-PNRLLAGIGTCYVELFRNVPLIVQFFSWY 85 Query: 79 YGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 +P IG+ F + F++ + L + +A + E +R+ I S+P+GQ A Sbjct: 86 LVVPELLPTKIGMWFKAELDPNIQFFLSSMFCLGMFTAARVCEQVRAGIQSLPRGQKAAG 145 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AIGLT QT R+++LP PL+SE ++++K++++ASTI + ++ A +++ Sbjct: 146 LAIGLTLPQTYRYVLLPNAYRVVVPPLTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 >gi|262282196|ref|ZP_06059965.1| amino acid ABC transporter permease [Streptococcus sp. 2_1_36FAA] gi|262262650|gb|EEY81347.1| amino acid ABC transporter permease [Streptococcus sp. 2_1_36FAA] Length = 269 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 112/222 (50%), Gaps = 26/222 (11%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 II+ P L+ +TL A V++LI + + R+ ++ I +V RGT Sbjct: 38 IIEKLPTTLF----LTLGGALFGLVLALIFAI-VKINRV----KVLYPIQALFVSFLRGT 88 Query: 69 PLLVQLFVIFYGLP--------HIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSII 115 P+LVQL + +YG+P G F+ + + +++ N +AY SE IR++I+ Sbjct: 89 PILVQLMLTYYGIPIALKVINQRFGTAFNINAIPASIFAVVAFAFNEAAYASETIRAAIL 148 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ +G+ +A+ ++G+T Q R +I+P + L + I + K TS+A + + E+F Sbjct: 149 SVSEGEIEAARSLGMTNAQVYRRVIIPNAAVVATPTLINSLIGLTKGTSLAFSAGVVEVF 208 Query: 176 QTAQRIVSTTYQPLIIYCELAFVY----LILTSFCYIIQIKI 213 AQ + + Y+ + +A VY +++ F I+ K+ Sbjct: 209 AQAQILGGSDYRYFERFISVALVYWVVNIMIEQFGRFIERKM 250 >gi|157369456|ref|YP_001477445.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157321220|gb|ABV40317.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 246 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 52/215 (24%), Positives = 117/215 (54%), Gaps = 18/215 (8%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ +G ++R + +S + YV +FR PL+VQ F Sbjct: 25 IWSGFQVTVALSVCAWIIAFFVGSLFGILRTV-PNRFLSTLGTCYVELFRNVPLIVQFFT 83 Query: 77 IFYGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P ++G+ F + FV+ ++ L L +A + E +R++I S+P+GQ Sbjct: 84 WYLVIPELLPANMGMWFKTELDPNVQFFVSSMLCLGLFTAARVCEQVRAAIQSLPRGQRA 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTS----FCYIIQIKIE 214 + + + Y+ + + F +++ K++ Sbjct: 204 YSAHAYESFTAITLAYIAINAVIMLFMRLVERKVQ 238 >gi|253987651|ref|YP_003039007.1| amino acid ABC transporter permease [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779101|emb|CAQ82261.1| similar to amino acid permease component of abc transporter [Photorhabdus asymbiotica] Length = 245 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 111/204 (54%), Gaps = 29/204 (14%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI---MHFYVW 63 +L+ + + L+ ++TL I+ + V S ++GF +A R D+ + ++ + Y Sbjct: 9 HLLAPQYLEWLWQGFLITLWISFCTVVASTLLGFLLAAAR----DSQLKILRWPVTAYTT 64 Query: 64 IFRGTPLLVQLF--------------VIFYGLPH----IGIVFD----SFVAIIISLTLN 101 +FR TPLLVQLF +++ PH +G+ F+A I LTL Sbjct: 65 LFRNTPLLVQLFFWYFASGQILPQDVMLWLNTPHEINLLGLPLSWPSFEFLAGFIGLTLY 124 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 + +++E +R+ I I +GQ A++A+GLT Q +R+++LPQ + + PL ++++I+K Sbjct: 125 SAPFVAEELRAGIQGIGRGQKYAAHALGLTGWQAMRYVVLPQALKIAMPPLLGQYMNIVK 184 Query: 162 STSVASTITIPEIFQTAQRIVSTT 185 ++S+ I + E+ ++++ + T Sbjct: 185 NSSLTMAIGVAELSYASRQVETET 208 >gi|154246017|ref|YP_001416975.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] gi|154160102|gb|ABS67318.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] Length = 224 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 104/194 (53%), Gaps = 1/194 (0%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + ++ ++ + VTL + + V+ + +G A + + L+ YV + R TP Sbjct: 10 LGAYAPVIAKGVAVTLELIAVGGVLGVTLGIACAWAKTQGPRWLRPLV-EAYVELIRNTP 68 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 L+QLF IF+GLP IG+ A I+++ +N AY EIIR+ I + PKGQ++A ++ Sbjct: 69 FLIQLFFIFFGLPAIGVGLTEMQAAILAMVINLGAYACEIIRAGIEATPKGQFEAGASLA 128 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 ++R QT RH++L + LSS+ + ++ ++V S I++ E+ A I S T++ Sbjct: 129 MSRVQTFRHVVLVPALQKIWPALSSQIVIVMFGSAVCSQISVEELTFAANFIQSRTFRAF 188 Query: 190 IIYCELAFVYLILT 203 Y +YL L Sbjct: 189 EAYIVATVLYLALA 202 >gi|327482801|gb|AEA86111.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166] Length = 231 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 85/154 (55%), Gaps = 11/154 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIGIVFD-------SFVAIIISLTLNFSAYISEI 109 Y I RG P L+ + +I++G + +G +F F A I+L L F AY +E+ Sbjct: 55 YSTIVRGVPELLWVLLIYFGTINLIRGLGELFGIANLALSPFAAGTIALGLCFGAYATEV 114 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R ++++IPKG +A A+GL +++ +ILPQ + L + F+ ++K T++ S I Sbjct: 115 FRGALLAIPKGHREAGLALGLGKRRIFLRLILPQMWRLALPGLGNLFMILMKDTALVSVI 174 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + EI + +Q V+ + +P + AF+YL LT Sbjct: 175 GLEEIMRRSQIAVTASKEPFTFFLVAAFIYLCLT 208 >gi|330503969|ref|YP_004380838.1| amino acid ABC transporter ATP-binding protein [Pseudomonas mendocina NK-01] gi|328918255|gb|AEB59086.1| amino acid ABC transporter ATP-binding protein [Pseudomonas mendocina NK-01] Length = 504 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 90/156 (57%), Gaps = 7/156 (4%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 YVW FR PLLV L + Y LP + ++ + F A + +L L +AY++EI R ++ Sbjct: 60 YVWFFRSVPLLV-LLIFVYNLPQLMPASGKVLSNPFYAGLFALVLTEAAYMAEIHRGGLL 118 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ KGQ +A+ A+G+ R R I++PQ + L++E+++I+K TS+ S I++ E+ Sbjct: 119 SVAKGQREAARALGIGRLGAQRLIVVPQAFRIALPTLTNEYVTIVKLTSLVSVISLSELL 178 Query: 176 QTAQRIVSTTYQPLIIYCELAFVY-LILTSFCYIIQ 210 QR+ + + L +A Y LI++ F + +Q Sbjct: 179 LVGQRLYAQNFLVLETLGAVAVYYVLIVSLFGWGLQ 214 >gi|315612723|ref|ZP_07887634.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] gi|315314833|gb|EFU62874.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] Length = 225 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 51/156 (32%), Positives = 90/156 (57%), Gaps = 4/156 (2%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G V+ I+ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAMVLGIIFGVLSTS-KHQILRILARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 FYGLP I I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYIS 136 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R IILPQ PL+++ ++++K+TS + I+ Sbjct: 137 AMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|116495483|ref|YP_807217.1| ABC-type amino acid transport system, permease component [Lactobacillus casei ATCC 334] gi|191638946|ref|YP_001988112.1| Glutamine ABC transporter permease [Lactobacillus casei BL23] gi|227534090|ref|ZP_03964139.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239629875|ref|ZP_04672906.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|116105633|gb|ABJ70775.1| amino acid ABC transporter membrane protein 1, PAAT family [Lactobacillus casei ATCC 334] gi|190713248|emb|CAQ67254.1| Glutamine ABC transporter permease [Lactobacillus casei BL23] gi|227188271|gb|EEI68338.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239527487|gb|EEQ66488.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|327382994|gb|AEA54470.1| Arginine/histidine ABC superfamily ATP binding cassette transporter permease [Lactobacillus casei LC2W] gi|327386182|gb|AEA57656.1| Arginine/histidine ABC superfamily ATP binding cassette transporter permease [Lactobacillus casei BD-II] Length = 214 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 5/182 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 TL + ++ + SLI+G A++ I F S +I I YV I R PLLV + + Sbjct: 19 TLASSILALIGSLIVGTLFALLEISPFKSLRVIGRI---YVEIVRNIPLLVITLAFYVIV 75 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 P + D F A I L + SA+I+E +R+ I ++P GQ + + +IG+T Q + II Sbjct: 76 PQFIVKIDGFTAGTIGLLIYTSAFIAETVRAGIEAVPGGQMEGARSIGMTYNQAMIQIIF 135 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PQ PL ++FI+++K++SV + + ++ + I +TT+ Y + YL+ Sbjct: 136 PQAFKMVIPPLGNQFINLVKNSSVLAFVAGFDLMYQGKLIAATTFSTFDTYLIVGVFYLV 195 Query: 202 LT 203 LT Sbjct: 196 LT 197 >gi|16119459|ref|NP_396165.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15161997|gb|AAK90606.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 216 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 116/213 (54%), Gaps = 10/213 (4%) Query: 12 SFPQLLYAAIVV--TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 SF LL+ A + T +A I+ + +G +A+ R S T++ +I +V + +G P Sbjct: 5 SFSDLLFLATALEWTFLMAAIALAFGVPLGLALAIARTSGS-TVLRVIASAFVELIQGIP 63 Query: 70 LLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 LL L ++G+P + G + VA+ + T+ + ++ +I R I ++ + QW+A + Sbjct: 64 LLGLLMFFYFGIPVLAGKDVPTVVAVGAAYTIYTAVFLGDIWRGGIQAVRQAQWEAGACL 123 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEF-ISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GL+ Q HII PQ A+P + F + ++K+TS+AS + + E+ + Q I + T+Q Sbjct: 124 GLSWLQQFVHIIGPQAFRI-ALPATVGFLVQLIKNTSLASVVGLVELARAGQMISAGTFQ 182 Query: 188 PLIIYCELAFVYLI----LTSFCYIIQIKIESS 216 PL++Y +A +Y LT++ ++ ++ + Sbjct: 183 PLLVYTLVAAIYFTICFPLTTWSRTLEARLNGA 215 >gi|306825705|ref|ZP_07459044.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432066|gb|EFM35043.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 225 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 51/156 (32%), Positives = 90/156 (57%), Gaps = 4/156 (2%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G V+ I+ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAMVLGIIFGVLSTS-KHQILRILARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 FYGLP I I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYIS 136 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R IILPQ PL+++ ++++K+TS + I+ Sbjct: 137 AMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|167586677|ref|ZP_02379065.1| histidine transport system permease protein [Burkholderia ubonensis Bu] Length = 237 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S + + +AV R+ +S+ + FY ++FRGTPL VQL +++ Sbjct: 21 SGLAVTLWLLVASISLGFVCAVPLAVARVS-KKKWVSMPVRFYTYVFRGTPLYVQLLLMY 79 Query: 79 YGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D+F I++ LN AY +EI +I +IP G+ +A+ A Sbjct: 80 TGMYSLEFVRSHSLLDAFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G+T +ILP + A+PL S+E I +L +T+VA T T+P+I + A+ S TY Sbjct: 140 GMTPFTMYCRVILPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYM 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL ++ Sbjct: 199 AFQSFGIAALIYLAVS 214 >gi|227114974|ref|ZP_03828630.1| glutamate/aspartate transport system permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227327384|ref|ZP_03831408.1| glutamate/aspartate transport system permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 246 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 102/178 (57%), Gaps = 14/178 (7%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VT+ ++ +++I+ +IG ++R + ++ I YV +FR PL+VQ F + Sbjct: 27 SGLQVTVTLSICAWIIAFLIGSLFGILRTV-PNRFLAGIGTCYVELFRNVPLIVQFFTWY 85 Query: 79 YGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 +P +IG+ F + F++ +I L L +A + E +R+ I S+P+GQ A Sbjct: 86 LVVPELLPVNIGMWFKAELDPNIQFFLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAG 145 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+GLT QT R+++LP PL+SE ++++K++++ASTI + ++ A +++ Sbjct: 146 LAMGLTLPQTYRYVLLPNAYRVIVPPLTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 >gi|88855456|ref|ZP_01130120.1| putative glutamate transporter permease [marine actinobacterium PHSC20C1] gi|88815363|gb|EAR25221.1| putative glutamate transporter permease [marine actinobacterium PHSC20C1] Length = 222 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 55/156 (35%), Positives = 86/156 (55%), Gaps = 1/156 (0%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 ++TL + IS + + ++G IA +RI + L Y I R PLL+ LF Y L Sbjct: 23 LLTLALLGISGLGAFVLGILIATMRIS-PVPALRLFATVYTEILRNIPLLLVLFFCAYVL 81 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 P +G+ D F+ + LTL S +++E +RS +P GQ +A+ +IG+ QT+ IIL Sbjct: 82 PILGVDLDFFLLAALGLTLYTSPFVAEAVRSGFNGVPVGQAEAARSIGMGFTQTVGLIIL 141 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PQ PL + FI++ K+TSVA + E+F+ Sbjct: 142 PQAGRMVVPPLINVFIALTKNTSVAGIFFVNELFKA 177 >gi|239940211|ref|ZP_04692148.1| putative ABC transporter permease protein [Streptomyces roseosporus NRRL 15998] gi|291443641|ref|ZP_06583031.1| ABC amino acid transporter [Streptomyces roseosporus NRRL 15998] gi|291346588|gb|EFE73492.1| ABC amino acid transporter [Streptomyces roseosporus NRRL 15998] Length = 297 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 35/239 (14%) Query: 2 KYEWFNLIIDSFPQLLYA-----AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 +EW D F Q A A+ +TL + I +G +A +R+ S + Sbjct: 59 GWEW-----DVFAQFFTAPTILKAVWITLQLTFYGTAIGFALGIVVAFMRLSASG-FLRT 112 Query: 57 IMHFYVWIFRGTPLLVQLFVIF----------YGLPHIGIVFDSF---------VAIIIS 97 + + Y+W FR PL+VQL F +G+P G F +F A ++ Sbjct: 113 VAYGYIWAFRSIPLIVQLLFWFNLAYLYKELTFGIP-FGPGFFAFDTMNLVGAMSAAVLG 171 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 L L+ +AY +EI+R ++++ GQ +A+ A+G+ + + +R I+LPQ + + ++E I Sbjct: 172 LALHQAAYAAEIVRGGVLAVGSGQLEAAAALGIPKFRQLRRIVLPQAMRSILPNAANEII 231 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 S+ K TS+ S + I E+F Q + + PL++ Y++LT+ ++Q +E Sbjct: 232 SLFKGTSIVSVMAIGELFYQVQVVYGRNGRVVPLLMVATA--WYILLTTVLSVLQHYVE 288 >gi|145297674|ref|YP_001140515.1| ABC-type glutamine/glutamate transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142850446|gb|ABO88767.1| ABC-type glutamine/glutamate transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 220 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 43/137 (31%), Positives = 82/137 (59%), Gaps = 1/137 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 ++ Y+ +FR P+LV L++ F+GLP G+ +F ++ L L ++ + E++R + Sbjct: 55 LLRVYLELFRVVPVLVWLYLFFFGLPIFFGLDIPAFWCAVLVLALWGASEVGEVVRGGLG 114 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ +GQ +A A+GL+ Q RH++LPQ + P + + I+K++S+A I + E+ Sbjct: 115 SLARGQQEAGLALGLSTWQLYRHVLLPQALQRLTPPTINIYTRIIKTSSLAVLIGVVEVI 174 Query: 176 QTAQRIVSTTYQPLIIY 192 + Q+I+ TY ++IY Sbjct: 175 KVGQQIIERTYASVLIY 191 >gi|172062639|ref|YP_001810290.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171995156|gb|ACB66074.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 229 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 53/219 (24%), Positives = 109/219 (49%), Gaps = 12/219 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +I F LL+A V T+ +A +S SL++G A ++ ++ ++ + FY + R Sbjct: 1 MIFQGFGPLLWAGTVETVKLAVLSLAASLVLGLVGASAKLS-TNRVLKWLGTFYTTLIRA 59 Query: 68 TPLLVQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 P LV + ++FYG+ +G I D FVA +I+L + AY +E R + ++ Sbjct: 60 VPDLVLMLLLFYGIQILLNMATDALGWDQIDIDPFVAGVITLGFIYGAYFTETFRGAFLA 119 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ +A +A G+ + I+ PQ + + + + + ++K+T++ S I + ++ + Sbjct: 120 VPRGQLEAGFAYGMGGWRVFHRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVK 179 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +Q +T +YL +T+ ++ +E Sbjct: 180 ASQDAGKSTLDFFFFTLAAGAIYLAITTVSNVVLHHLEK 218 >gi|197284336|ref|YP_002150208.1| glutamate/aspartate ABC transporter permease [Proteus mirabilis HI4320] gi|194681823|emb|CAR41084.1| glutamate/aspartate ABC transporter, permease protein [Proteus mirabilis HI4320] Length = 246 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 111/208 (53%), Gaps = 14/208 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ ++ +++I+ I+G F ++R + ++S + YV +FR PL+VQ F + +P Sbjct: 31 VTVALSLCAWIIAFIVGSFFGILRTV-PNRLLSSLGAIYVELFRNVPLIVQFFTWYLVIP 89 Query: 83 H-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 IG F FV+ + L L +A + E +R++I S+P+GQ A A+G Sbjct: 90 ELLPQAIGDWFKMDLTPNIQFFVSSALCLGLFTAARMCEQVRAAINSLPRGQKAAGLALG 149 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 LT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ + + Sbjct: 150 LTLPQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAIASTIGLIDMAAQANKLLDYSAKAY 209 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSV 217 + + Y+ + +I +E V Sbjct: 210 ESFTAITLAYVFINVIIMLIMHWLEKRV 237 >gi|148555538|ref|YP_001263120.1| binding-protein-dependent transport systems inner membrane component [Sphingomonas wittichii RW1] gi|148500728|gb|ABQ68982.1| binding-protein-dependent transport systems inner membrane component [Sphingomonas wittichii RW1] Length = 374 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 78/130 (60%) Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 FVA++ + SA+ +EI+R + +P+GQW+AS A+GL+++Q++R +I+PQ + Sbjct: 242 EFVAVLWGSVIYASAFAAEIVRGGLDGVPRGQWEASRALGLSKRQSLRLVIVPQALRMIV 301 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYII 209 P++S+FI+ILK++++A + P++ A ++ T Q L L V+ L S + Sbjct: 302 PPMNSQFITILKNSTLALVVGYPDLNFVANTAINHTGQGLEGVAILMLVFFTLASAISLA 361 Query: 210 QIKIESSVTQ 219 ++ + V + Sbjct: 362 MNRLNARVQR 371 >gi|315452694|ref|YP_004072964.1| amino-acid ABC transporter integral membrane protein [Helicobacter felis ATCC 49179] gi|315131746|emb|CBY82374.1| amino-acid(Glutamine) ABC transporter integral membrane protein [Helicobacter felis ATCC 49179] Length = 212 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 95/168 (56%), Gaps = 1/168 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL I+ + + ++GF +A+ ++F + + Y + R TPLL+QLF ++Y Sbjct: 11 GLFITLEISFWGILGATLLGFGVALC-LYFKPKFLLRLARGYTELARNTPLLIQLFFLYY 69 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 GL IG+ + ++ + AY++E + ++ K Q+++S ++GL++ Q++R + Sbjct: 70 GLHEIGLSLSALSCAVLGVIFLGGAYMAESFLLGLKALSKVQFESSLSLGLSKWQSLRFV 129 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +LPQ++ S L + I +LK TSV S I + ++ A+ ++ Y+ Sbjct: 130 LLPQSLAISLPSLGANTIFLLKETSVVSAIALADLMFVAKDLIGIYYK 177 >gi|270159601|ref|ZP_06188257.1| amino acid ABC transporter permease protein [Legionella longbeachae D-4968] gi|289165608|ref|YP_003455746.1| transporter subunit: permease component of ABC superfamily transporter [Legionella longbeachae NSW150] gi|269987940|gb|EEZ94195.1| amino acid ABC transporter permease protein [Legionella longbeachae D-4968] gi|288858781|emb|CBJ12686.1| putative transporter subunit: permease component of ABC superfamily transporter [Legionella longbeachae NSW150] Length = 212 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 92/167 (55%), Gaps = 1/167 (0%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEI 109 I+ +++ ++ I RGTP+++QL I++ +P IGI + +A +I+ LN SAYI+EI Sbjct: 42 QGIMKPLINGFISIMRGTPVILQLSFIYFAVPALIGIKANIMMAGLITFGLNSSAYIAEI 101 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 +R+ I +PKGQ++A+ + + + I+LPQ I +E I++LK T++ +TI Sbjct: 102 LRAGIEHLPKGQFEAAKTLHIPNFYLWKDIVLPQVIKNVLPAFINEMIALLKETALIATI 161 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 ++ + AQ + + + + C F Y L + KIE Sbjct: 162 GGMDLMRRAQSVAAEQFTYFLPLCIAGFYYYALVLLIETLGKKIEQR 208 >gi|239986699|ref|ZP_04707363.1| putative ABC transporter permease protein [Streptomyces roseosporus NRRL 11379] Length = 297 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 35/239 (14%) Query: 2 KYEWFNLIIDSFPQLLYA-----AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 +EW D F Q A A+ +TL + I +G +A +R+ S + Sbjct: 59 GWEW-----DVFAQFFTAPTILKAVWITLQLTFYGTAIGFALGIVVAFMRLSASG-FLRT 112 Query: 57 IMHFYVWIFRGTPLLVQLFVIF----------YGLPHIGIVFDSF---------VAIIIS 97 + + Y+W FR PL+VQL F +G+P G F +F A ++ Sbjct: 113 VAYGYIWAFRSIPLIVQLLFWFNLAYLYKELTFGIP-FGPGFFAFDTMNLVGAMSAAVLG 171 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 L L+ +AY +EI+R ++++ GQ +A+ A+G+ + + +R I+LPQ + + ++E I Sbjct: 172 LALHQAAYAAEIVRGGVLAVGSGQLEAAAALGIPKFRQLRRIVLPQAMRSILPNAANEII 231 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 S+ K TS+ S + I E+F Q + + PL++ Y++LT+ ++Q +E Sbjct: 232 SLFKGTSIVSVMAIGELFYQVQVVYGRNGRVVPLLMVATA--WYILLTTVLSVLQHYVE 288 >gi|293393702|ref|ZP_06638011.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] gi|291423824|gb|EFE97044.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] Length = 252 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 108/203 (53%), Gaps = 27/203 (13%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF--- 60 EW L+ + L+ ++TL ++ + + + ++G IA +R D+ + L+ Sbjct: 15 EW--LLEPQYLGWLWHGFLLTLWLSACAGLAATLLGLAIAALR----DSPLPLLRGLAVA 68 Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIGIVFDS--------------FVAIIISLTLNF 102 Y +FR TPLLVQLF ++ LP + + + F+A LTL Sbjct: 69 YSALFRNTPLLVQLFFWYFAAGQILPSTAMQWLNTPHQFGWLAWPSFEFLAGCCGLTLYS 128 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +A+I+E +RS I + GQ A+ A+GLT Q +RH++LPQ +T + PL ++++++K+ Sbjct: 129 AAFIAEEVRSGIRGVAVGQKQAANALGLTGWQAMRHVVLPQALTIALPPLLGQYMNLIKN 188 Query: 163 TSVASTITIPEIFQTAQRIVSTT 185 +S+ I + E+ ++++ + T Sbjct: 189 SSLTMAIGVAELSYASRQVETET 211 >gi|302388264|ref|YP_003824086.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium saccharolyticum WM1] gi|302198892|gb|ADL06463.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium saccharolyticum WM1] Length = 244 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 96/174 (55%), Gaps = 12/174 (6%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHF 60 W N + +FP+ ++TL I+ + ++L +G V+ FS ++ +I Sbjct: 10 RW-NALFQAFPEYYIPGFLMTLKISLVGLAVALALG----VVFGMFSTAKFKLLKIISRI 64 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI----GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 YV + TPL +Q+ + LP + G FV +I + + AYISE+IR+ I + Sbjct: 65 YVEFIQNTPLALQVLCYYSVLPMLFSSSGFRIPKFVLGVIGVGVYHGAYISEVIRTGIEA 124 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 IPKGQ +A+ + G + +T+ HIILPQTI PL+++ ++++K+TS+ + + Sbjct: 125 IPKGQSEAASSQGFSYLETMYHIILPQTIKIIMPPLANQALNLVKNTSILAMVA 178 >gi|87122496|ref|ZP_01078376.1| putative amino acid ABC transporter, permease protein [Marinomonas sp. MED121] gi|86162289|gb|EAQ63574.1| putative amino acid ABC transporter, permease protein [Marinomonas sp. MED121] Length = 220 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/158 (32%), Positives = 88/158 (55%), Gaps = 1/158 (0%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI 94 + +G A IR + + S++ YV I R TP +VQLF IF+GLP +G+ + A Sbjct: 32 GIALGTSCAAIRQYGNKASQSVV-AVYVEIIRNTPFIVQLFFIFFGLPSLGMKLSPWEAS 90 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 +I+LT+N AY +EIIR+ + SI KGQ +A+ +GL+ QT+ +I L+S Sbjct: 91 MIALTINLGAYSTEIIRAGLGSISKGQMEAAKVLGLSFCQTLTRVIFTPAFEKIYPALTS 150 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 + I ++ ++V S I++ ++ A + S ++ Y Sbjct: 151 QCIIVMLGSAVISQISVEDLTYAANLVQSRNFRAFESY 188 >gi|330005623|ref|ZP_08305301.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|328536189|gb|EGF62570.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 253 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/225 (24%), Positives = 120/225 (53%), Gaps = 7/225 (3%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L++ +P ++ TL ++ ++ + + +G + + R+ +S + ++++ RG Sbjct: 15 LLMGQYPDGPLGGVLCTLLVSLLAVLFAFPVGVLLCLARLS-PWRWLSWPVTCWIYLLRG 73 Query: 68 TPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PL++ +F ++ +P IG F ++ +L + S YI+EI+R I ++P GQ++AS Sbjct: 74 IPLMMVVFWTYFCVPLLIGHNISGFSTMLCTLVIYESTYIAEIVRGGIQALPSGQYEASR 133 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G+ + +R +ILPQ + + L S+ +SI+K +++ I +PE+ A ++ + Sbjct: 134 ALGMGHVRALRLVILPQALYNALPSLVSQLVSIIKDSTLGYVINVPELTYAANQVSNQLL 193 Query: 187 -QPLIIYCELAFVYLI----LTSFCYIIQIKIESSVTQHTYSVDK 226 +P ++ +A Y I LT ++++I S + ++ K Sbjct: 194 TKPFQVFAIVALSYYIINFSLTWLANRLELRIASRRQRAQSAMGK 238 >gi|325970436|ref|YP_004246627.1| polar amino acid ABC transporter inner membrane subunit [Spirochaeta sp. Buddy] gi|324025674|gb|ADY12433.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta sp. Buddy] Length = 221 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/190 (31%), Positives = 102/190 (53%), Gaps = 8/190 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + +TL IA IS +S + G + + R + + + Y+ R PLL+ + Sbjct: 17 LSKGLGMTLFIALISICLSFVFGSVLGIAR-YLGKGPAAKLAALYIDSVRNIPLLLFILS 75 Query: 77 IFYGLPHI--GI-VFDSFV-AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 LP + GI + D V + I+++T+ SA ++EI+R + IPKGQW+A+ + G +R Sbjct: 76 FRLLLPSVILGIRIPDKAVFSGIVAMTVFTSAMVAEILRGGLNGIPKGQWEAAASQGFSR 135 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST---TYQPL 189 +T+R+II PQ + VP+ +F++ LK TS + I E+ A I+ +YQ + Sbjct: 136 YKTLRYIIFPQALRKILVPMLGQFVTCLKDTSFLQVVGISELMMNATIIMGKFKYSYQVI 195 Query: 190 IIYCELAFVY 199 ++Y +A Y Sbjct: 196 LLYTLVALAY 205 >gi|323155720|gb|EFZ41890.1| glutamine transport system permease glnP domain protein [Escherichia coli EPECa14] Length = 132 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 79/129 (61%) Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 D F A ++++ +N AYI+EI R +++SI KG +A A+GL+R +TIR++ILP + Sbjct: 1 DPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRM 60 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 PL +++I +K TS+ I + E+ + Q I++ ++ L I+ +A +YLI+T Sbjct: 61 LPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVLYLIITLVLSF 120 Query: 209 IQIKIESSV 217 I ++E + Sbjct: 121 ILRRLERRM 129 >gi|290580620|ref|YP_003485012.1| putative amino acid ABC transporter permease [Streptococcus mutans NN2025] gi|254997519|dbj|BAH88120.1| putative amino acid ABC transporter permease protein [Streptococcus mutans NN2025] Length = 230 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 88/149 (59%), Gaps = 10/149 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLP-------HIGIV-FDSFVAIIISLTLNFSAYISEIIRS 112 YV+I R TP +V LF++FYGLP H+ + + + +++++ L F+A ISE+ +S Sbjct: 59 YVFILRCTPPIVLLFLVFYGLPEFLTWWLHLDVDDWSRAIFVVVTMVLLFAASISEVFKS 118 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +++PKGQ +A +IGLT QT R I+LPQT + +++ ++++K ++A TI + Sbjct: 119 AYLAVPKGQLEAGLSIGLTGFQTFRRILLPQTFQIALPNITTAILNLMKDAALAYTIGLV 178 Query: 173 EIFQTAQRIVSTTYQ--PLIIYCELAFVY 199 ++ I+S L Y +A +Y Sbjct: 179 DVMGAGNLIISRNLGNYSLETYTAVALIY 207 >gi|326333230|ref|ZP_08199477.1| glutamate permease [Nocardioidaceae bacterium Broad-1] gi|325948874|gb|EGD40967.1| glutamate permease [Nocardioidaceae bacterium Broad-1] Length = 229 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/157 (34%), Positives = 94/157 (59%), Gaps = 9/157 (5%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL +A S + SL++G +A R+ ++ I V+ FR TPL + +F +GL Sbjct: 17 LTLRLAIFSGIFSLLLGVVLATFRVS-PVPVLRWIGSAVVYTFRNTPLTLVMFFTLFGLS 75 Query: 83 H-IGIVFD-------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 + +G+ FD +F +++L++ S ++ E++RS I ++P GQ +A+ AIGLT Q Sbjct: 76 YQLGVSFDKELLYRNNFWLAVLALSVYTSTFVCEVLRSGINTVPLGQAEAARAIGLTFTQ 135 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 +R I+LPQ + + PL+S I++ K+T+VA TI + Sbjct: 136 NLRLIVLPQALRSVINPLASVLIAMTKNTTVAVTIGV 172 >gi|239821010|ref|YP_002948195.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] gi|239805863|gb|ACS22929.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 233 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 106/203 (52%), Gaps = 10/203 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ F +L+ + TL IA S+++++ + + V+R+ + + ++ YV R Sbjct: 10 LLKPEFGAMLWHGLQETLKIAAGSWLLAMAMAVVLLVVRLT-PNRLAERVVAGYVSYHRN 68 Query: 68 TPLLVQLFVIFYG----LPH-----IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 P LVQL + ++G LP + + + I++L L +AY SE +RS + SIP Sbjct: 69 VPTLVQLMLWYFGIFSLLPDALQGWLSVHNAETILSIVALGLCQAAYFSEDMRSGLRSIP 128 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +A+ A+G ++RH++LPQ I + L + +S+ K++S+A I + E+ Sbjct: 129 PGQAEAARALGHGYIGSMRHVMLPQAIRNAVPALVNHSVSLFKNSSLAMAIGVAELTHAV 188 Query: 179 QRIVSTTYQPLIIYCELAFVYLI 201 + I S +++ Y +YL+ Sbjct: 189 KEIESQSFRTFEAYSMATVLYLV 211 >gi|194017355|ref|ZP_03055967.1| L-cystine transport system permease protein TcyL [Bacillus pumilus ATCC 7061] gi|194011223|gb|EDW20793.1| L-cystine transport system permease protein TcyL [Bacillus pumilus ATCC 7061] Length = 232 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 114/213 (53%), Gaps = 10/213 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +T I +S ++IIG A IRI ++ + Y+ R TPL+VQLF+I++GLP Sbjct: 21 LTFFIIIVSLFFAIIIGLLFACIRIK-QIPVLKQLAVIYLSFTRSTPLIVQLFLIYFGLP 79 Query: 83 HIGIV-------FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 + +V +D + ++++ +L+ AY+SE+ RS+ S+ K Q +A+Y +G+T Q Sbjct: 80 QLLLVAGIQINHWDRVLFVMMTFSLHTGAYLSEVFRSAYSSVGKDQLEAAYIVGMTDTQA 139 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI--IYC 193 + II+PQ + L + I ++K T++A TI + +I + I+ Y + +Y Sbjct: 140 LIRIIIPQAFLIALPNLGNYTIDLVKDTAIAFTIGLIDIMGQVKIILGNNYGIGMFEVYV 199 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 +A VY ++ +I + +E + S+ + Sbjct: 200 IIAIVYWLICMSIELITMLLERKFVKGRTSLSR 232 >gi|110347170|ref|YP_665988.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110283281|gb|ABG61341.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein [Chelativorans sp. BNC1] Length = 243 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 10/176 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEII 110 YV +FR P LVQLF+ ++ LP + + +F ++ L SA ++E + Sbjct: 68 YVELFRNIPFLVQLFLWYFVLPELLPQSMGNWLKALPNSAFWTTVLGLGFYMSARVAEQL 127 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R+ I S+P+GQ A AIGLT QT R+++LP PL+SEF++ +K+TSVA TI Sbjct: 128 RAGISSLPRGQKLAGAAIGLTTPQTYRYVLLPMAFRIILPPLTSEFLNTIKNTSVALTIG 187 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 + E+ A+ + T+Q + +YL + I +E V Y+ + Sbjct: 188 LVELTARARAMQEFTFQIFEAFTVATVLYLTVNILVTIGMRYLEHRVAVPGYTAGR 243 >gi|324997392|ref|ZP_08118504.1| glutamate permease [Pseudonocardia sp. P1] Length = 292 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/223 (26%), Positives = 118/223 (52%), Gaps = 13/223 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFY 61 +EW + + +L A+ T+ ++ V+SL+ G A R+ SD +S Sbjct: 50 WEWITYVNIQY--ILLGALWATVSAFLVAAVLSLVFGAVFAGGRL--SDHRWVSGPATAI 105 Query: 62 VWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V FR PLLV +F++++GL +GI D+F A+++ L L + ++E+ R+ + ++P+G Sbjct: 106 VEFFRAIPLLVLIFILYFGLSQGLGIDIDAFWAVVLGLMLYNGSVLAEVFRAGVNAVPRG 165 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-----F 175 Q +A+YA+GL + Q + +++LPQ + + S+ + +LK T++ I PE+ F Sbjct: 166 QREAAYALGLRKTQVMTNVLLPQAFRSMLPTILSQLVVVLKDTALGFIILYPELLYQARF 225 Query: 176 QTAQRIVSTTYQPLIIYCELAFVY--LILTSFCYIIQIKIESS 216 +Q + P+ I + ++ LILT +++ ++ Sbjct: 226 LGSQNQLGAPILPVAIVIAVIYIGLCLILTGLSRLVEKRLARG 268 >gi|324991996|gb|EGC23918.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK405] Length = 286 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 16/184 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL---IMHFYVWIFRGTPLLVQLFV 76 I+ LPI + V + G +A++ + + I F+V RGTPLLVQL + Sbjct: 54 GILQNLPITLLLTVGGAVFGIMLAMVFAVVKINRVKVLYPIQAFFVSFLRGTPLLVQLML 113 Query: 77 IFYGLP--------HIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 ++G+P G F+ + V I++ N +AY SE IR++I+S+ G+ + Sbjct: 114 TYFGIPLLLKAINQQYGTSFNINDIPASVFAIVAFAFNEAAYASETIRAAILSVDPGEIE 173 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++G+T KQ +I+P + L + I + K TS+A + + EIF AQ I Sbjct: 174 AARSLGMTNKQVYMRVIIPNAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAG 233 Query: 184 TTYQ 187 Y+ Sbjct: 234 ADYR 237 >gi|254191286|ref|ZP_04897790.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei Pasteur 52237] gi|157938958|gb|EDO94628.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei Pasteur 52237] Length = 237 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 103/196 (52%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S + +AV R+ + +S + FY ++FRGTPL VQL +++ Sbjct: 21 SGLAVTLWLLVASLGAGFVCAVPLAVARVS-KNRWLSTPVRFYTYVFRGTPLYVQLLLLY 79 Query: 79 YGLPHIGIVFD----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V + F I++ LN AY +EI +I +I G+ +A+ A Sbjct: 80 TGMYSLAFVREHAWLDAFFRSGFHCAILAFALNTCAYTTEIFAGAIRAIAHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++ R +ILP ++ A+PL S+E I +L +T+VA T T+P+I + A+ S TY Sbjct: 140 GMSPFTMYRRVILPSSLR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYM 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL ++ Sbjct: 199 AFQSFGIAALIYLAVS 214 >gi|111225075|ref|YP_715869.1| glutamate permease [Frankia alni ACN14a] gi|111152607|emb|CAJ64348.1| Glutamate permease [Frankia alni ACN14a] Length = 305 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 101/192 (52%), Gaps = 3/192 (1%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 LL+ ++ TL A + V ++++G +A+ R+ + + V +FR P+L+ + Sbjct: 65 LLWNGLLDTLRAALTAMVFAVVLGVALAMARMS-RHRAVRIPATAVVELFRSLPVLMLIL 123 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 + GLP +G +F A+++ LT A ISEI R+ I SI +GQ +A+ A+GL Q Sbjct: 124 FAYLGLPALGWKLSAFWALVLGLTAYNGAVISEIFRAGIASIDRGQTEAAAALGLRPVQV 183 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTYQPLIIYC 193 R I PQ + + L S+ +++LK TS+ I E+ ++ + V + L IY Sbjct: 184 FRLIQFPQAVRRMSPTLISQLVTLLKDTSLGFVIAYSELLRSGRGAVEFLGSRYALPIYT 243 Query: 194 ELAFVYLILTSF 205 +A +Y++ S Sbjct: 244 AIAVIYIVTNSL 255 >gi|53719999|ref|YP_108985.1| histidine transport system permease [Burkholderia pseudomallei K96243] gi|126454676|ref|YP_001067041.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 1106a] gi|134277781|ref|ZP_01764496.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|167720504|ref|ZP_02403740.1| histidine transport system permease protein [Burkholderia pseudomallei DM98] gi|167816701|ref|ZP_02448381.1| histidine transport system permease protein [Burkholderia pseudomallei 91] gi|167846609|ref|ZP_02472117.1| histidine transport system permease protein [Burkholderia pseudomallei B7210] gi|167895192|ref|ZP_02482594.1| histidine transport system permease protein [Burkholderia pseudomallei 7894] gi|167903578|ref|ZP_02490783.1| histidine transport system permease protein [Burkholderia pseudomallei NCTC 13177] gi|167919825|ref|ZP_02506916.1| histidine transport system permease protein [Burkholderia pseudomallei BCC215] gi|217421178|ref|ZP_03452683.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|237813149|ref|YP_002897600.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei MSHR346] gi|242317526|ref|ZP_04816542.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|254184252|ref|ZP_04890842.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 1655] gi|254195732|ref|ZP_04902158.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei S13] gi|254258433|ref|ZP_04949487.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 1710a] gi|52210413|emb|CAH36395.1| histidine transport system permease protein [Burkholderia pseudomallei K96243] gi|126228318|gb|ABN91858.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|134251431|gb|EBA51510.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|169652477|gb|EDS85170.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei S13] gi|184214783|gb|EDU11826.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 1655] gi|217396590|gb|EEC36607.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|237505402|gb|ACQ97720.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei MSHR346] gi|242140765|gb|EES27167.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|254217122|gb|EET06506.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 1710a] Length = 237 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 103/196 (52%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S + +AV R+ + +S + FY ++FRGTPL VQL +++ Sbjct: 21 SGLAVTLWLLVASLGAGFVCAVPLAVARVS-KNRWLSTPVRFYTYVFRGTPLYVQLLLLY 79 Query: 79 YGLPHIGIVFD----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V + F I++ LN AY +EI +I +I G+ +A+ A Sbjct: 80 TGMYSLAFVREHAWLDAFFRSGFHCAILAFALNTCAYTTEIFAGAIRAIAHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++ R +ILP ++ A+PL S+E I +L +T+VA T T+P+I + A+ S TY Sbjct: 140 GMSPFTMYRRVILPSSLR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYM 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL ++ Sbjct: 199 AFQSFGIAALIYLAVS 214 >gi|220909976|ref|YP_002485287.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece sp. PCC 7425] gi|219866587|gb|ACL46926.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7425] Length = 283 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 66/229 (28%), Positives = 117/229 (51%), Gaps = 35/229 (15%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+I FP L A V TL I+ S V+++++G A R+ ++ + YV + RG Sbjct: 44 LLIRYFP-FLVQATVTTLGISITSMVLAMVLGGIGAWGRLS-KWALVRGVAIVYVEVVRG 101 Query: 68 TPLLVQLFVIFYG----LPHIGI---------------------VFDSFVAIIISLTLNF 102 TP LVQL + +G + +G VF+ ++ L+ N+ Sbjct: 102 TPTLVQLLLWGFGIGTVMSQLGFDPRALAFNLLTPLQSNSLVSPVFNFIFYGVLGLSFNY 161 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AY++E+ R+ I SI +GQ +A+ ++GL QT+ I+LPQ I + P ++ FI++++ Sbjct: 162 GAYLTEVFRAGIESISRGQTEAALSLGLDSVQTMGRIVLPQAIRLTIPPFTNNFITLIQD 221 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSF----CY 207 +++ STI + E+ Q++ S+ PL + FV+++ F CY Sbjct: 222 SALLSTIGVTEL----QQVTSSFAYPLTNPNDKLFVFILGALFYLALCY 266 >gi|186473373|ref|YP_001860715.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184195705|gb|ACC73669.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 214 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/152 (33%), Positives = 85/152 (55%), Gaps = 1/152 (0%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS 97 +G +A+IR + ++ I+ YV + R P + +IF+ LP GI D A I++ Sbjct: 30 LGLGLALIR-WARVPFLNRIVVAYVSLIRSCPAVTLTLLIFFALPQFGISLDPTPAAILA 88 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 LT++ +A+ EI R+++I+ P+ Q+DA+ A + R R I++PQ +S L +E Sbjct: 89 LTISTAAFNCEIWRAALINFPRDQYDAALAFAMPRTVRFRRIVMPQIWRSSLPGLVNEMT 148 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 +KST + I I EI + A R+ + TY PL Sbjct: 149 LQIKSTPAVAVIGIVEITRAALRVGARTYDPL 180 >gi|319897355|ref|YP_004135551.1| arginine transporter subunit [Haemophilus influenzae F3031] gi|317432860|emb|CBY81225.1| arginine transporter subunit [Haemophilus influenzae F3031] Length = 227 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 100/177 (56%), Gaps = 10/177 (5%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS---------LTL 100 + ++ +++ Y+ +F GTPLLVQ F+I+ G + +S + +S L L Sbjct: 41 ENKLVKSVVNLYLTLFTGTPLLVQFFLIYAGPSQFQWIIESPLWFFLSNAWFCAALALAL 100 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N +AY +++ ++ +I KGQW++ A+GL+R QT++ I++P + + S+E I + Sbjct: 101 NSAAYSTQLFHGAVKAIHKGQWESCAALGLSRLQTLK-ILIPYALKRALPSYSNEIILVF 159 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 K T++ STITI +I A+++ T Y + IY +YLI+T ++ K+E V Sbjct: 160 KGTALTSTITIMDIMGYARQLYGTEYDAITIYGIAGGIYLIITGIATLLLRKLEKKV 216 >gi|332286034|ref|YP_004417945.1| glutamate/aspartate transport system permease protein [Pusillimonas sp. T7-7] gi|330429987|gb|AEC21321.1| glutamate/aspartate transport system permease protein [Pusillimonas sp. T7-7] Length = 251 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 20/222 (9%) Query: 1 MKYEWFNLII-DSFP------QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI 53 M Y W L+ D P Q L + T+ A +S++++L +G + V R S Sbjct: 1 MNYNWNWLVFFDEAPGGVTYLQTLLEGLAWTIGTATLSWLLALSMGTLVGVARTT-SMPW 59 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLP------------HIGIVFDSFVAIIISLTLN 101 + YV + R PLLVQ+F+ ++ +P I + F+ ++ L Sbjct: 60 ARRLGTMYVELLRNVPLLVQMFLWYFVMPELVPRSLGDAIKQIAPPWGIFIPAVLCLGFY 119 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 S+ ++E +R+ I S+P GQ A+ A+GL Q R+++LP + PL+SE ++++K Sbjct: 120 TSSRVAEQVRAGIESLPAGQRMAATALGLESAQVYRYVLLPSSFRIILPPLTSELLNLIK 179 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +TSVA TI + E+ A+ + ++Q + YLIL Sbjct: 180 NTSVAFTIGLFELVGAARSMQEFSFQVFETFALATLFYLILN 221 >gi|254477906|ref|ZP_05091291.1| polar amino acid uptake family ABC transporter, permease protein [Ruegeria sp. R11] gi|214028491|gb|EEB69327.1| polar amino acid uptake family ABC transporter, permease protein [Ruegeria sp. R11] Length = 259 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/160 (32%), Positives = 87/160 (54%), Gaps = 25/160 (15%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI----------------IISLTLNFSAYIS 107 I RGTPLL+Q+++++YGL G +F F I +++LTL+++ Y Sbjct: 88 IIRGTPLLLQIWLLYYGL---GSLFPQFPWIRSSELWPYLRQAWPYAVLALTLSYAGYEG 144 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E++R + + KGQ +A+ + G+ R R I LPQ + L E I LK+T + + Sbjct: 145 EVMRGAFSGVAKGQLEAAKSFGMPRMTMFRRIWLPQAVRNVLPTLGGETILQLKATPLVA 204 Query: 168 TITIPEIFQTAQRIVSTT---YQPLIIYCELAFVYLILTS 204 TIT+ +I+ + R+ S T Y+PL++ LA VY+ + Sbjct: 205 TITVLDIYAVSSRVRSDTFIVYEPLLL---LALVYMAIAG 241 >gi|197286729|ref|YP_002152601.1| amino acid ABC transporter permease [Proteus mirabilis HI4320] gi|194684216|emb|CAR45715.1| putative amino acid ABC transporter, permease protein [Proteus mirabilis HI4320] Length = 249 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/210 (25%), Positives = 113/210 (53%), Gaps = 6/210 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ ++P +T+ I+ I+ ++S+I+G + ++L F + Sbjct: 9 NWQYLLFGAYPDGPLEGAALTIFISVIAGIVSIILGTLGGIALAMLKGVWVNLFAAF-LG 67 Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FR P+++ +F +++ LP + G+ +I +L L S+YI+ +++ I++I KGQW Sbjct: 68 FFRAIPVIMLIFWLYFLLPVVLGMEIPEITTVICALALITSSYIAHGVKAGILAIGKGQW 127 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRI 181 A ++G R QT+ +I+LPQ + +++I+++K TS+A + + E+ F Q Sbjct: 128 QAGLSLGFNRWQTLWYIVLPQALRMMVPSFINQWIALIKDTSLAYVVGVGELSFLATQVN 187 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + P+ ++ +AF+Y +L C+ +++ Sbjct: 188 NRSMVYPMEVFLFVAFIYFVL---CFSLEL 214 >gi|254464505|ref|ZP_05077916.1| polar amino acid uptake family ABC transporter, permease protein [Rhodobacterales bacterium Y4I] gi|206685413|gb|EDZ45895.1| polar amino acid uptake family ABC transporter, permease protein [Rhodobacterales bacterium Y4I] Length = 253 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 28/207 (13%) Query: 32 FVISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF 88 V+S +GF +AV + +S+ + I RGTPLL+Q+++++YGL G +F Sbjct: 53 LVVSTFLGFLLAVPLGLAQAVGPWYLSIPARTFCTIIRGTPLLLQIWLLYYGL---GSLF 109 Query: 89 DSFVAI----------------IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 F I +++LTL+++ Y E++R + + KGQ +A+ + G+ R Sbjct: 110 PQFPWIRSSELWPYLRQAWPYAVLALTLSYAGYEGEVMRGAFSGVAKGQLEAAKSFGMPR 169 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPL 189 R + LPQ + L E I LK+T + +TIT+ EI+ + R+ + T Y+PL Sbjct: 170 FTIFRRVWLPQAVRNVLPTLGGETILQLKATPLVATITVMEIYAVSSRVRADTFIVYEPL 229 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESS 216 ++ LA VY+ + + ++E Sbjct: 230 LL---LALVYMAIAGVIALAFRRLEKG 253 >gi|27382709|ref|NP_774238.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27355881|dbj|BAC52863.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 230 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 107/203 (52%), Gaps = 10/203 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I + P L Y + T+ + ++ + LI G IA++R+ ++ I YV Sbjct: 7 FDVIRRALPYLFYEGMTFTVTLTALAGLGGLIFGTAIALMRLS-GFKVLGRIAGVYVDFM 65 Query: 66 RGTPLLVQLFVIFYGLPHIG---------IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 R PL++ +F ++ +P+IG I +F + +I+ + +AY SEI+R+ I S Sbjct: 66 RSLPLVLVIFWFYFLVPYIGQWVTGASRPISVGAFASSLITFIMFEAAYFSEIMRAGIQS 125 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ A+ A+GLT QT+R+++LPQ L ++ I + + TS+ ++IP+ Sbjct: 126 ISRGQPAAANALGLTYAQTMRYVVLPQAFRNMLPVLLTQTIVLFQDTSLVYVLSIPDFLG 185 Query: 177 TAQRIVSTTYQPLIIYCELAFVY 199 A ++ + + +Y A VY Sbjct: 186 AASKVAQRDGRLVEMYLFAAVVY 208 >gi|293397297|ref|ZP_06641569.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] gi|291420215|gb|EFE93472.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] Length = 292 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 113/214 (52%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ +G ++R + ++ I YV +FR PL+VQ F Sbjct: 71 IWSGFQVTIALSVCAWIIAFFVGSLFGILRTV-PNRFLAAIGTAYVELFRNVPLIVQFFT 129 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG+ F + FV+ I L L +A + E +R++I S+P+GQ Sbjct: 130 WYLVIPELLPPDIGMWFKAELDPNVQFFVSSTICLGLFTAARVCEQVRAAIQSLPRGQQA 189 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 190 AGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 249 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+ + + ++ +E V Sbjct: 250 YSAHAYESFTAITLAYIGINAVIMLVMRVVERKV 283 >gi|70730911|ref|YP_260652.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68345210|gb|AAY92816.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 220 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 2/158 (1%) Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG P L+ L ++GLP G+ SF A ++L +AY SEIIR I ++ +GQ +A+ Sbjct: 63 RGAPALILLQYFYFGLPSAGLTLSSFWAAALALAYCTAAYTSEIIRGGIEAVAQGQNEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 IGL R +R IILPQ + + L I + ++ S+ TI +PEI A I S+T Sbjct: 123 EVIGLNRFDALRFIILPQAMRVALPSLLGFSIMMFQAASLCFTIALPEIVSRASAIGSST 182 Query: 186 --YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Y P++ L + + + + ++ + + +QH Sbjct: 183 FEYMPVLTLAGLMYAAVCAPATLGVAALEKKLAPSQHA 220 >gi|57504977|ref|ZP_00370929.1| amino acid ABC transporter, permease protein [Campylobacter coli RM2228] gi|305432023|ref|ZP_07401190.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter coli JV20] gi|57019249|gb|EAL55955.1| amino acid ABC transporter, permease protein [Campylobacter coli RM2228] gi|304445107|gb|EFM37753.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter coli JV20] Length = 219 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 108/208 (51%), Gaps = 1/208 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L +V+TL IA + +IS+I G F+A+ + + D L+ Y+ IFR TPLL+ + Sbjct: 11 EFLMQGLVLTLKIALATCIISIIFGTFLAITKNY-GDRFSRLLATCYIDIFRNTPLLLWM 69 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 + LP I +L S+ ++EIIR + SIPKGQ++A+Y+ G ++ Sbjct: 70 LAACFVLPSFFPQMPQAFWGTIGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGFSKFF 129 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 T+ +IILPQT L S+ ++ +K T+ + + I E+ ++ I++ I Sbjct: 130 TLFYIILPQTFRKVVPSLLSQIVTTVKDTAYLAGLQIAELTYNSKNILARLTSFDEILAT 189 Query: 195 LAFVYLILTSFCYIIQIKIESSVTQHTY 222 + FV +I + C+ + + + + Y Sbjct: 190 IGFVAVIYFAICFSLSMLVRYYAKKTAY 217 >gi|260891039|ref|ZP_05902302.1| amino acid ABC transporter, permease protein [Leptotrichia hofstadii F0254] gi|260859066|gb|EEX73566.1| amino acid ABC transporter, permease protein [Leptotrichia hofstadii F0254] Length = 225 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/196 (29%), Positives = 107/196 (54%), Gaps = 4/196 (2%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L ++VT IA +S V S++ G + ++ + + II I+ FY+ R PLLV L Sbjct: 16 QRLMGGLIVTGQIALVSIVFSILFGLILGIV-MTSKNKIIYGILKFYLESMRIIPLLVWL 74 Query: 75 FVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 F+I++G+ + DS II + +A + +I+R +IIS+PK Q +++ A+GL Sbjct: 75 FIIYFGVAKGFDLHIDSETTTIIVFVIWGTAEMMDIVRGAIISLPKIQGESAKALGLDTS 134 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV--STTYQPLII 191 Q R+++LPQ + A + ++K+TS+A I + E+ + ++I+ S+ P+ Sbjct: 135 QVYRYVLLPQAVRRIAPAAVNLITRMIKTTSLAIFIEVAEVLKIGRQIIEFSSRKNPMAP 194 Query: 192 YCELAFVYLILTSFCY 207 + F++ + CY Sbjct: 195 FWVYLFIFFLYFIICY 210 >gi|241661637|ref|YP_002979997.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12D] gi|240863664|gb|ACS61325.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] Length = 244 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 74/132 (56%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV R TP LVQL +F+GLP +G+ + + A +++ +N AYI+EI+R+ I P+G Sbjct: 60 YVEGIRNTPFLVQLMFMFFGLPSLGVQINEWQAALLTAVVNLGAYITEIVRAGIQETPRG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+ ++R RH++L + LSS+ + ++ TSV S I ++ A Sbjct: 120 QLEAANALAMSRWAIFRHVVLRPALQKVWPALSSQIVIVMLGTSVVSQIAAQDLTFAANF 179 Query: 181 IVSTTYQPLIIY 192 I S ++ Y Sbjct: 180 IQSRNFRAFETY 191 >gi|227355081|ref|ZP_03839492.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Proteus mirabilis ATCC 29906] gi|227164868|gb|EEI49715.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Proteus mirabilis ATCC 29906] Length = 249 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/210 (25%), Positives = 113/210 (53%), Gaps = 6/210 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ ++P +T+ I+ I+ ++S+I+G + ++L F + Sbjct: 9 NWQYLLFGAYPDGPLEGAALTIFISVIAGIVSIILGTLGGIALAMLKGVWVNLFAAF-LG 67 Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FR P+++ +F +++ LP + G+ +I +L L S+YI+ +++ I++I KGQW Sbjct: 68 FFRAIPVIMLIFWLYFLLPVVLGMEIPEITTVICALALITSSYIAHGVKAGILAIGKGQW 127 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRI 181 A ++G R QT+ +I+LPQ + +++I+++K TS+A + + E+ F Q Sbjct: 128 QAGLSLGFNRWQTLWYIVLPQALRMMVPSFINQWIALIKDTSLAYVVGVGELSFLATQVN 187 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + P+ ++ +AF+Y +L C+ +++ Sbjct: 188 NRSMVYPMEVFLFVAFIYFVL---CFSLEL 214 >gi|168490506|ref|ZP_02714649.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC0288-04] gi|183574954|gb|EDT95482.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC0288-04] Length = 225 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 90/157 (57%), Gaps = 6/157 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G F + I+ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAVGSFILAMVLGIFFGAMSTS-KRPILRILARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLP----HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 FYGLP HI I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHI-IMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYI 135 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R I LPQ PL+++ ++++K+TS + I+ Sbjct: 136 SAMRLITLPQAFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|315612885|ref|ZP_07887796.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] gi|315314995|gb|EFU63036.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] Length = 266 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 90/172 (52%), Gaps = 20/172 (11%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP----------HIGIVFDSFVAI---IISLTLNFS 103 + F+V +GTP+LVQL + +YG+P G+ ++ A I++ N + Sbjct: 76 LQAFFVSFLKGTPILVQLMLTYYGIPLLLKAINQQWGTGLNINAIPAALFAIVAFAFNEA 135 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AY SE IR++I+S+ G+ +A+ ++G+TR Q R +I+P + L + I + K T Sbjct: 136 AYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKGT 195 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 S+A + + E+F AQ + Y+ + +A VY +++ I IES Sbjct: 196 SLAFSAGVVEVFAQAQILGGADYRYFERFISVALVY-------WVVNIGIES 240 >gi|326780213|ref|ZP_08239478.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] gi|326660546|gb|EGE45392.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] Length = 305 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 66/239 (27%), Positives = 119/239 (49%), Gaps = 35/239 (14%) Query: 2 KYEWFNLIIDSFPQLLYA-----AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL 56 +EW D F Q A A+ +TL + V+ +G +A +R+ S + Sbjct: 67 GWEW-----DVFAQFFSAPVILKAVWLTLQLTFYGTVLGFALGIVLAFMRLSAS-PFLRT 120 Query: 57 IMHFYVWIFRGTPLLVQLFVIF----------YGLPHIGIVFDSF---------VAIIIS 97 + + Y+W FR PL+VQL F +G+P G F +F A ++ Sbjct: 121 VAYGYIWAFRSIPLIVQLLFWFNLAYLYKELQFGIP-FGPGFFTFDTMNLVGAVSAAVLG 179 Query: 98 LTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 L L+ +AY +EI+R ++++ GQ +A+ A+G+ + + +R I+LPQ + + ++E I Sbjct: 180 LALHQAAYAAEIVRGGVLAVGGGQLEAASALGIPKLRQLRRIVLPQAMRSILPNAANEII 239 Query: 158 SILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 S+ K TS+ S + I E+F Q + + + PL++ Y++LT+ I+Q +E Sbjct: 240 SLFKGTSIVSVMAIGELFYQVQVVYGRSGRVVPLLMVATA--WYILLTTALSIVQYYVE 296 >gi|317012950|gb|ADU83558.1| ABC-type transport system, permease; putative amino-acid transporter GlnP1 [Helicobacter pylori Lithuania75] Length = 217 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 107/201 (53%), Gaps = 5/201 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + ++ S P L + +TL I+ ++SL++GF A+I ++F IS I++ Sbjct: 1 MALDW-DFMLHSIPMFL-KGLELTLYISFFGILLSLLVGFLCAII-LYFKTRFISPIVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QRESALSLGFSPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQPLIIYCELAFVYLI 201 + Y+ L+ YLI Sbjct: 176 FIGIYYKTTESLLMLSLTYLI 196 >gi|227358520|ref|ZP_03842845.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Proteus mirabilis ATCC 29906] gi|227161231|gb|EEI46305.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Proteus mirabilis ATCC 29906] Length = 264 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 111/208 (53%), Gaps = 14/208 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ ++ +++I+ I+G F ++R + ++S + YV +FR PL+VQ F + +P Sbjct: 49 VTVALSLCAWIIAFIVGSFFGILRTV-PNRLLSSLGAIYVELFRNVPLIVQFFTWYLVIP 107 Query: 83 H-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 IG F FV+ + L L +A + E +R++I S+P+GQ A A+G Sbjct: 108 ELLPQAIGDWFKMDLTPNIQFFVSSALCLGLFTAARMCEQVRAAINSLPRGQKAAGLALG 167 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 LT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ + + Sbjct: 168 LTLPQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAIASTIGLIDMAAQANKLLDYSAKAY 227 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSV 217 + + Y+ + +I +E V Sbjct: 228 ESFTAITLAYVFINVIIMLIMHWLEKRV 255 >gi|298291389|ref|YP_003693328.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296927900|gb|ADH88709.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 458 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 103/195 (52%), Gaps = 6/195 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + ++VTL IA V SL +G +A+ R I+ L+ ++ +RG PL+ LF Sbjct: 246 WGGLLVTLVIAVTGIVASLPLGIALALGRRS-QMPIVRLLSVVFIEFWRGVPLITVLFFA 304 Query: 78 FYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 Y LP G D + ++ + L +AY++E+IR + +IPKGQ++ + A+GLT Q Sbjct: 305 TYMLPLFLPQGSNPDGLLRALVGVALFSAAYMAEVIRGGLQAIPKGQYEGAMAVGLTWSQ 364 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE-IFQTAQRIVSTTY-QPLIIY 192 +R IILPQ +T + + FIS+ K T++ ++I + + Q + P+ +Y Sbjct: 365 MMRLIILPQALTLVIPGIVNSFISLFKDTTLVLIVSIFDFLGQLRASFTDPNWASPVTLY 424 Query: 193 CELAFVYLILTSFCY 207 AF ++ FC+ Sbjct: 425 TGFAFAGVVYFLFCF 439 >gi|296156735|ref|ZP_06839573.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295893334|gb|EFG73114.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 220 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/222 (25%), Positives = 113/222 (50%), Gaps = 9/222 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISF---VISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 F+++ ++ P LL + VT ++ I V++ I+ + A R F ++ YV Sbjct: 5 FSIVREAVPVLL-DGLRVTALVSAIGIPLGVVAGIVAAYAAQSRTFLKPVALA-----YV 58 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + R P L+ +++ F+GLP +GI + I Y SEI+R+++ S+P+GQ Sbjct: 59 ELVRNIPYLILVYLSFFGLPKLGIGASAMTVAIGCTVFYTGGYFSEILRAALRSVPRGQT 118 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 AS ++G+T QT RH+I PQ P +S I + K +++ S +++PE+ + + Sbjct: 119 QASLSLGMTFWQTQRHVIAPQLFGYVTPPTTSLVIMMFKDSAIFSVMSLPEMTYQSNLLT 178 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 + T+ + + A +Y I + + ++E+++ + V Sbjct: 179 ANTFAYVEVLGTTALIYWICSVLLASVGRRLETAIGRRARHV 220 >gi|116491603|ref|YP_811147.1| ABC-type amino acid transport system, permease component [Oenococcus oeni PSU-1] gi|290891210|ref|ZP_06554272.1| hypothetical protein AWRIB429_1662 [Oenococcus oeni AWRIB429] gi|116092328|gb|ABJ57482.1| amino acid ABC transporter membrane protein 2, PAAT family [Oenococcus oeni PSU-1] gi|290479174|gb|EFD87836.1| hypothetical protein AWRIB429_1662 [Oenococcus oeni AWRIB429] Length = 222 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 50/141 (35%), Positives = 84/141 (59%), Gaps = 1/141 (0%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + R PLL+ +F +++ LP IGI F A +I++T+ S ++EIIR +++IP GQ + Sbjct: 66 VIRNLPLLLIIFFVYFVLPVIGIYLPVFWATVIAMTVFESTMLAEIIRGGLLAIPIGQTE 125 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 + ++G+T +Q + +IILPQ I P+ S+ IS++K TS+A I + E+ Q I + Sbjct: 126 GARSVGMTNQQALLNIILPQAIKKMIPPIISQLISLVKDTSLAVGIVLAEMTFRGQIIYA 185 Query: 184 TTYQPLI-IYCELAFVYLILT 203 I ++ LA +Y IL Sbjct: 186 QNSNYTIPVFIALAIMYFILN 206 >gi|207723708|ref|YP_002254106.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2] gi|206588912|emb|CAQ35874.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2] Length = 230 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 93/165 (56%), Gaps = 6/165 (3%) Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V++ RGTPLL+ +F ++ LP I G D F ++ +L + AY++EI+R+ I ++P+G Sbjct: 65 VYLVRGTPLLMVIFWAYFLLPSITGQRTDQFSTMLTALVIFDGAYLAEIVRAGIQALPRG 124 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQ 179 Q +++ ++GL+ Q +R +ILPQ + L ++ +S +K TS+ I++PE+ F T Q Sbjct: 125 QMESARSLGLSYMQAMRRVILPQALRNMLPSLVNQLVSTIKETSLGYIISLPEVSFITTQ 184 Query: 180 RIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIESSVTQH 220 + + Y LA Y + LT Y+++ ++ + Sbjct: 185 ISTAVMTKSAETYGLLALSYFVMCFGLTRCAYLLERRLAARAASK 229 >gi|83592633|ref|YP_426385.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC 11170] gi|83575547|gb|ABC22098.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170] Length = 227 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 100/187 (53%), Gaps = 3/187 (1%) Query: 34 ISLIIGFFIAVIRIF-FSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV 92 + ++ GF +A++R F+ + ++ Y+ + RGTP L+QLF+++ G P IG+ ++ Sbjct: 32 LGIVFGFALALLRRLPFAP--LRWVVRAYIEVIRGTPFLIQLFLLYSGGPFIGLRLEATT 89 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 A I+ L + SAY +EI R ++PKG +A ++ ++ +R I++P + + Sbjct: 90 AGILGLGIYGSAYFAEIFRGGFEAVPKGYVEAGESLSMSPLVILRRIVVPTMLVAILPAI 149 Query: 153 SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIK 212 + I + K T V S IT+PE+ Q + + T+ + LA Y +L + + Sbjct: 150 VNMMIILTKETVVLSIITVPELMYEMQTMAAETFAVFEVIFGLALFYWLLVEVVSRLGRR 209 Query: 213 IESSVTQ 219 +E+ +T+ Sbjct: 210 VEARLTR 216 >gi|315222025|ref|ZP_07863936.1| ABC transporter, permease protein [Streptococcus anginosus F0211] gi|315188991|gb|EFU22695.1| ABC transporter, permease protein [Streptococcus anginosus F0211] Length = 269 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 15/204 (7%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + D P+++ L +F LI+ A+++I + L F+V RGT Sbjct: 31 VFDGLPRIIEKLPTTLLLTLGGAF-FGLILALIFAIVKINRVKVLYPL-QAFFVSFLRGT 88 Query: 69 PLLVQLFVIFYGLP----HIGIVFDSFVAI---------IISLTLNFSAYISEIIRSSII 115 P+LVQL + +YG+P I + F + + I I++ N +AY SE IR++I+ Sbjct: 89 PVLVQLMLTYYGIPLLLKAINLRFGTGLNINAIPAYLFAIVAFAFNEAAYASETIRAAIL 148 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ G+ +A+ ++G+T Q R +I+P + L + I + K TS+A + + EIF Sbjct: 149 SVDAGEIEAARSLGMTNGQVYRRVIIPNAAVVATPTLINSLIGLTKGTSLAFSAGVVEIF 208 Query: 176 QTAQRIVSTTYQPLIIYCELAFVY 199 AQ + Y+ + +A VY Sbjct: 209 AQAQILGGADYRYFERFISVALVY 232 >gi|77456538|ref|YP_346043.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77380541|gb|ABA72054.1| amino acid ABC transporter membrane protein 1, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 231 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 11/170 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYG-----------LPHIGIVFDSFVAIIISLTLNFSAYISEI 109 Y + RG P L+ + +I++G L + + +F A +I+L L F AY +E+ Sbjct: 55 YSTLVRGVPELLWVLLIYFGTVNAMRALGEFLGNPELELSAFAAGVIALGLCFGAYATEV 114 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +I++IPKG +A A+GL++ + +I+PQ + L + F+ ++K T++ S I Sbjct: 115 FRGAILAIPKGHREAGVALGLSKWRIFTKLIMPQMWRIALPGLGNLFMILMKDTALVSVI 174 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + EI + AQ V+ + QP Y A +YL LT I +E + Sbjct: 175 GLEEIMRHAQIGVTVSKQPFTFYMVAALMYLGLTVLAMIGMHLLEKRAAR 224 >gi|121593037|ref|YP_984933.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax sp. JS42] gi|222109805|ref|YP_002552069.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax ebreus TPSY] gi|120605117|gb|ABM40857.1| amino acid ABC transporter membrane protein 1, PAAT family [Acidovorax sp. JS42] gi|221729249|gb|ACM32069.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax ebreus TPSY] Length = 250 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 99/181 (54%), Gaps = 3/181 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ +S ++L++G + +R + + +V +FR PLLV +FV ++ +P Sbjct: 41 TVSVSLLSLAVALVVGSLVGTLRTLEGRPWTVRLGNAWVELFRNIPLLVHIFVWYHVVPS 100 Query: 84 IGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 I S FV ++ +L SA I+E +RS I ++P+GQ A A+G T Q R+++ Sbjct: 101 IFPAMKSLPGFVLVVFALGFFTSARIAEQVRSGIQALPRGQRYAGMALGFTTFQYYRYVL 160 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LP PL+SE +++ K++SVA +++ E+ A + T + + +Y + +Y+ Sbjct: 161 LPMAFRIIIPPLTSETMNVFKNSSVAFAVSVAELTMFAMQAQEETSRGIEVYLAVTALYI 220 Query: 201 I 201 I Sbjct: 221 I 221 >gi|94309637|ref|YP_582847.1| amino acid ABC transporter permease [Cupriavidus metallidurans CH34] gi|93353489|gb|ABF07578.1| ABC-type transporter, permease component: PAAT family [Cupriavidus metallidurans CH34] Length = 230 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/213 (25%), Positives = 112/213 (52%), Gaps = 7/213 (3%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I +P + +T+ +A V++L +G + + R+ T+ +++ RGT Sbjct: 13 LIGQYPNGPLGGLALTVLLAASGLVLALPVGIVLGLCRVSPFRTL-RWPATVLIYVVRGT 71 Query: 69 PLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PLL+ +F ++ LP + G F ++++L + AY++EI+R+ I +P+GQ +++ + Sbjct: 72 PLLMVVFWAYFLLPSVTGHRTPQFATMLVALVVFDGAYLAEIVRAGIQGLPRGQMESARS 131 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVSTTY 186 +GL+ Q + +ILPQ + L ++ +S +K TS+ I++PE+ F Q Sbjct: 132 LGLSYAQAMALVILPQALRNMLPSLVNQLVSTIKETSLGYIISLPEVSFIAGQISTQMLT 191 Query: 187 QPLIIYCELAFVYLI----LTSFCYIIQIKIES 215 Q +Y LA Y + LT Y+++ ++ + Sbjct: 192 QAAQVYLLLALSYFVMCFGLTRCAYLLERRLAA 224 >gi|300741912|ref|ZP_07071933.1| glutamate transport system permease protein GluD [Rothia dentocariosa M567] gi|300381097|gb|EFJ77659.1| glutamate transport system permease protein GluD [Rothia dentocariosa M567] Length = 311 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 90/167 (53%), Gaps = 4/167 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +V TL A IS + S+ G + R+ + ++ V FR P+L+ + + Sbjct: 76 GLVSTLQAAGISVITSIAFGVVFGMARLA-QNRVLRWFGTIVVEFFRAVPVLMMMIFFWL 134 Query: 80 GLPHIGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 L + S F+A++I LT + I+E++RS + +P+GQ +A AIGLT QT+ Sbjct: 135 FLSRFSWINPSQLPFLAVVIGLTFYNGSVIAELLRSGVKQLPRGQGEAGLAIGLTPGQTL 194 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 R I++PQ + + S+F+ ILK T++ I+ PE+ +A+RI S Sbjct: 195 RTILMPQAFNSMMPSMLSQFVVILKDTALGYIISYPELLASARRIGS 241 >gi|253990334|ref|YP_003041690.1| arginine permease ArtQ [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781784|emb|CAQ84947.1| arginine transport system permease protein artq [Photorhabdus asymbiotica] Length = 238 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 45/138 (32%), Positives = 79/138 (57%), Gaps = 4/138 (2%) Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 + F+ +I+L+L +SAY S+ +R +I +IP GQW+A A+GL R + +I+PQ + Sbjct: 102 NPFLCGVIALSLLYSAYASQTLRGAIKAIPAGQWEAGLALGLGRAEIFFRLIMPQMWRHA 161 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 LS++++ +LK T++ S I++ ++ + I + T +P Y +A +YL +T Sbjct: 162 LPGLSNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYMIVALIYLAITLISQF 221 Query: 209 IQIKIESSVTQHTYSVDK 226 I KIE HT D+ Sbjct: 222 ILKKIE----MHTTRFDR 235 >gi|257125147|ref|YP_003163261.1| polar amino acid ABC transporter inner membrane protein [Leptotrichia buccalis C-1013-b] gi|257049086|gb|ACV38270.1| polar amino acid ABC transporter, inner membrane subunit [Leptotrichia buccalis C-1013-b] Length = 225 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/196 (29%), Positives = 108/196 (55%), Gaps = 4/196 (2%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L +VVT IA +S V S+++G + ++ + + II ++ FY+ R PLLV L Sbjct: 16 QRLMGGLVVTGQIALVSIVFSILLGLILGIV-MTSKNKIIYGVLKFYLESMRIIPLLVWL 74 Query: 75 FVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 F+I++G+ + DS II + +A + +I+R +IIS+PK Q +++ A+GL Sbjct: 75 FIIYFGVAKGFDLHIDSETTTIIVFVIWGTAEMMDIVRGAIISLPKIQGESAKALGLDTI 134 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV--STTYQPLII 191 Q R+++LPQ + A + ++K+TS+A I + E+ + ++I+ S+ P+ Sbjct: 135 QVYRYVLLPQAVRRIAPAAVNLITRMIKTTSLAIFIEVAEVLKIGRQIIEFSSRKNPMAP 194 Query: 192 YCELAFVYLILTSFCY 207 + F++ + CY Sbjct: 195 FWVYLFIFFLYFIICY 210 >gi|300703460|ref|YP_003745062.1| amino acid transmembrane ABC transporter protein [Ralstonia solanacearum CFBP2957] gi|299071123|emb|CBJ42435.1| putative amino acid transmembrane abc transporter protein [Ralstonia solanacearum CFBP2957] Length = 230 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/160 (31%), Positives = 92/160 (57%), Gaps = 6/160 (3%) Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V+ RGTPLL+ +F ++ LP I G D F ++ +L + AY++EI+R+ I ++P+G Sbjct: 65 VYGVRGTPLLMVIFWAYFLLPSITGQRTDQFSTMLTALVIFDGAYLAEIVRAGIQALPRG 124 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQ 179 Q +++ ++GL+ Q +R +ILPQ + L ++ +S +K TS+ I++PE+ F T Q Sbjct: 125 QMESARSLGLSYMQAMRRVILPQALRNMLPSLVNQLVSTIKETSLGYIISLPEVSFITTQ 184 Query: 180 RIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIES 215 + + Y LA Y LT F Y+++ ++ + Sbjct: 185 ISTAVMTKSAETYGLLALSYFAMCFGLTRFAYLLERRLAA 224 >gi|261343546|ref|ZP_05971191.1| glutamate/aspartate ABC transporter, permease protein [Providencia rustigianii DSM 4541] gi|282568695|gb|EFB74230.1| glutamate/aspartate ABC transporter, permease protein [Providencia rustigianii DSM 4541] Length = 246 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 104/180 (57%), Gaps = 14/180 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + VT+ ++ +++I+ ++G F ++R + ++ I YV +FR PL+VQ F Sbjct: 25 LISGLEVTVTLSICAWIIAFLVGSFFGILRTV-PNRFLAFIGTAYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG F F++ ++ L L +A ++E +R++I S+P+GQ Sbjct: 84 WYLVIPELLPQSIGDWFKMELDPNYQFFISSMLCLGLFTAARMTEQVRAAIQSLPRGQKS 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQTYRYVLLPNAYRVILPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 >gi|213968637|ref|ZP_03396779.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301385504|ref|ZP_07233922.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302059836|ref|ZP_07251377.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302132497|ref|ZP_07258487.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926570|gb|EEB60123.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 229 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 13/215 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 +TL +A S +++++G +R+ I+ + Y + RG P LV + +IFYG Sbjct: 15 LTLQLALSSMALAIVLGLIGVALRLS-PVRWIAWLGDLYSTVVRGIPDLVLILLIFYGGQ 73 Query: 81 ------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P +G I D +A I +L F AY+SE R + ++IPKGQ +A A GL Sbjct: 74 DLLNRVAPLLGFDDYIDLDPLLAGICTLGFIFGAYLSETFRGAFMAIPKGQAEAGMAYGL 133 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + + I++PQ I + ++ ++ + K+T++ S + + ++ A++ T +P Sbjct: 134 SSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATREPFT 193 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + +A +YL++TS + +E + + D Sbjct: 194 FFLAVAAMYLVITSVSLLALRYLEKRYSAGVRAAD 228 >gi|225858443|ref|YP_002739953.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae 70585] gi|225721638|gb|ACO17492.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae 70585] Length = 225 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 90/157 (57%), Gaps = 6/157 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G F + I+ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAMVLGIFFGAMSTS-KRPILRILARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLP----HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 FYGLP HI I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHI-IMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYI 135 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R I LPQ PL+++ ++++K+TS + I+ Sbjct: 136 SAMRLITLPQAFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|118471268|ref|YP_887851.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC [Mycobacterium smegmatis str. MC2 155] gi|118172555|gb|ABK73451.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Mycobacterium smegmatis str. MC2 155] Length = 237 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 1/152 (0%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF-DSFVAIIISLTLNFSAYISEIIR 111 I+ + +V FRGT +LVQL + Y LP +G+ F D+ VA I+ L LN AY +EI+R Sbjct: 46 IVRAPAYVFVEFFRGTSILVQLAWVVYALPFLGVRFTDNLVAGIVVLGLNEGAYAAEIVR 105 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 +I S P+GQ +A+ A+G+ Q +R I++PQ+I + + +LK+T + I + Sbjct: 106 GAIASRPRGQTEAAVALGMKPAQRMRRILVPQSIPVMLPSFGNVAVDLLKATPLVYFIGV 165 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + I + T I L VY IL Sbjct: 166 ADFTANGLAIRTETQDTTTILLTLLVVYFILA 197 >gi|317404446|gb|EFV84860.1| polar amino acid ABC transporter [Achromobacter xylosoxidans C54] Length = 368 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 115/204 (56%), Gaps = 4/204 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W +I DS Q+L +T+ + ++ +++ G +A++R+ S+ + + + Sbjct: 150 MNLDW-GIIWDSR-QVLLQGAAMTVMLTVVTMALAVPGGMVLALMRLS-SNRVANGVAVA 206 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 V FR PL++ ++ FY +P + + F + +++L LN SAY SE R+ I SI K Sbjct: 207 IVEFFRNLPLILVIYWAFYVMPMALDVQFSAVTTALVALVLNVSAYNSETFRAGINSIRK 266 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ A+G++R+Q + +++PQ L+S +IS+ K TS+ S I + E+ + Sbjct: 267 GQMEAALAMGMSRRQAMFKVLVPQAARRILPVLASTWISLFKDTSLVSVIAVSELAYASM 326 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 ++ + +++ L + +A +Y ++ Sbjct: 327 QVRAQSFRVLEMLTAMAVIYWLMG 350 >gi|212709679|ref|ZP_03317807.1| hypothetical protein PROVALCAL_00727 [Providencia alcalifaciens DSM 30120] gi|212687490|gb|EEB47018.1| hypothetical protein PROVALCAL_00727 [Providencia alcalifaciens DSM 30120] Length = 222 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 94/172 (54%), Gaps = 12/172 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD----------SFVAIIISLTLNF 102 ++S + Y+ +F GTPLLVQ F+I+ G + D ++ +++L LN Sbjct: 43 VVSQAVKVYITLFTGTPLLVQFFLIYNGPSQFKSLQDYPMLWEFISTPWICAMVALALNS 102 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY + + ++ +IP GQW + A+G+ + QT+R IILP S S+E + I KS Sbjct: 103 AAYSTLLFHGAVKAIPSGQWQSCQALGMNKLQTMR-IILPYAFKRSLSSYSNEVVLIFKS 161 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+ASTIT+ +I + ++ T+ ++ + +YL++ + +I IE Sbjct: 162 TSLASTITMLDIMGYSSQVFGQTWD-VMAFVAAGIIYLVVNAILTLIMRLIE 212 >gi|307725562|ref|YP_003908775.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307586087|gb|ADN59484.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 265 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 95/161 (59%), Gaps = 4/161 (2%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+++S P L+ +V TL ++ IS + ++ G +A+ + + + + + +V IFRG Sbjct: 13 LLVESLPALIGTGLVNTLILSVISTALGIVAGMALALCAVSHTRWL-TWPVRVFVDIFRG 71 Query: 68 TPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 P + + V+ GL +G++ + + I++L L SAYI+EI RS I S+ +GQ A Sbjct: 72 LPAALVILVVGQGLAPVGLLVFGPNPYPLAIVALALVSSAYIAEIFRSGIQSVGRGQMSA 131 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 A+G+T +RH+I+PQ + L+++FISI+K +S+ Sbjct: 132 CQALGMTYWSGMRHVIVPQGVRRILPALANQFISIVKDSSL 172 >gi|150396325|ref|YP_001326792.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150027840|gb|ABR59957.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 384 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 96/170 (56%), Gaps = 6/170 (3%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 WF L P L+ ++VTL ++ + +SL +G +A+ R + +I ++ ++ + Sbjct: 162 WFGLTYVETP--LWGGLMVTLVLSFVGIAVSLPLGILLALGRRS-NMPVIKMLCTAFIEV 218 Query: 65 FRGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 RG PL+ LF+ LP G+ FD F+ +I ++L SAY++E++R + +IPKGQ Sbjct: 219 IRGVPLITVLFMASVMLPLFLPQGVTFDKFLRALIGVSLFASAYMAEVVRGGLQAIPKGQ 278 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++ + ++GL+ Q + I+LPQ + + + FI + K TS+ S I + Sbjct: 279 YEGADSLGLSYWQKMGFIVLPQALKLVIPGIVNTFIGLFKDTSLVSIIGM 328 >gi|170742665|ref|YP_001771320.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168196939|gb|ACA18886.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 230 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 113/218 (51%), Gaps = 13/218 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I+ + P L + TL + ++ V I+G IA++R+ ++ L+ YV Sbjct: 7 FSVIVSALPYLFLTGMTFTLTLTALAAVSGTILGTLIAMMRLS-GLPVLPLVAKGYVNFM 65 Query: 66 RGTPLLVQLFVIFYGLPHIG---------IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 R PL++ +F ++ +P++G I +F + +++ TL +AY SEI+R+ I S Sbjct: 66 RSLPLVLVIFWFYFLVPYLGQWLIGAERPIQVGAFTSSLVTFTLFEAAYFSEIMRAGIQS 125 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQ A+ A+GLT Q++ +ILPQ L ++ I + + TS+ ++I + Sbjct: 126 IPKGQAAAASALGLTYWQSMGSVILPQAFRNMLPVLLTQTIVLFQDTSLVYVLSITDFLG 185 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 A ++ + + +Y A VY + C++ I + Sbjct: 186 AASKVAQRDGRLVEMYLFAALVYF---AICFLASILVR 220 >gi|150378347|ref|YP_001314941.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] gi|150032894|gb|ABR65008.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 384 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 96/170 (56%), Gaps = 6/170 (3%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 WF L P L+ ++VTL ++ + +SL +G +A+ R + +I ++ ++ + Sbjct: 162 WFGLTYVETP--LWGGLMVTLVLSFVGIAVSLPLGILLALGRRS-NMPVIKMLCTAFIEV 218 Query: 65 FRGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 RG PL+ LF+ LP G+ FD F+ +I ++L SAY++E++R + +IPKGQ Sbjct: 219 IRGVPLITVLFMASVMLPLFLPQGVTFDKFLRALIGVSLFASAYMAEVVRGGLQAIPKGQ 278 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++ + ++GL+ Q + I+LPQ + + + FI + K TS+ S I + Sbjct: 279 YEGADSLGLSYWQKMGFIVLPQALKLVIPGIVNTFIGLFKDTSLVSIIGM 328 >gi|77408203|ref|ZP_00784948.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] gi|77173218|gb|EAO76342.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] Length = 267 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 15/204 (7%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D+ P +L + +TL + + LI+ AV++I I+ I +V RGT Sbjct: 31 VLDAIPSIL-ERLPITLLLTVAGALFGLILALIFAVVKIN-RVKILYPIQALFVSFLRGT 88 Query: 69 PLLVQLFVIFYGLP------HIGIVFD-------SFVAIIISLTLNFSAYISEIIRSSII 115 P+LVQL + +YG+P + FD + V I + N +AY SE IR++I+ Sbjct: 89 PILVQLMLSYYGIPLFLKFLNQKYGFDWNINAIPASVFAITAFAFNEAAYTSETIRAAIL 148 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ +G+ +A+ ++G+T Q R +I+P + L + I + K TS+A I E+F Sbjct: 149 SVDQGEIEAARSLGMTSAQVYRRVIIPNAAVVATPTLINTLIGLTKGTSLAFNAGIVEMF 208 Query: 176 QTAQRIVSTTYQPLIIYCELAFVY 199 AQ + + Y+ Y +A VY Sbjct: 209 AQAQIMGGSDYRYFERYISVALVY 232 >gi|312865871|ref|ZP_07726092.1| ABC transporter, permease protein [Streptococcus downei F0415] gi|311098275|gb|EFQ56498.1| ABC transporter, permease protein [Streptococcus downei F0415] Length = 230 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 120/214 (56%), Gaps = 17/214 (7%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 +A+ VTL + ++ + ++G + ++ SDT ++ YV+ R TP +V LF++F Sbjct: 18 SALPVTLWVIALTVFLGTLLGASLTWAQVG-SDTGLAGFARAYVFTLRCTPPIVLLFLVF 76 Query: 79 YGLP-------HIGI-VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 YGLP H+ + + + +++++ L F+A +SE+ +++ +++PKGQ +A +IGL Sbjct: 77 YGLPQFLTWWLHLDVDGWSRTIFVVVTMVLLFAASVSEVFKAAYLAVPKGQMEAGLSIGL 136 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--P 188 T QT R I+LPQ + + + ++++K ++A TI + ++ ++S Sbjct: 137 TGYQTFRRILLPQIFKIALPNIITAILNLMKDAALAYTIGLVDVMGAGNLLISRNLGNYS 196 Query: 189 LIIYCELAFVY----LILTSFCYIIQ--IKIESS 216 L Y +AF+Y LIL+ ++++ + +E+S Sbjct: 197 LETYTAVAFIYWGLALILSVASHLLEHHLDLENS 230 >gi|300784267|ref|YP_003764558.1| amino acid ABC transporter permease [Amycolatopsis mediterranei U32] gi|299793781|gb|ADJ44156.1| permease component of ABC-type amino acid transport system [Amycolatopsis mediterranei U32] Length = 286 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 100/183 (54%), Gaps = 5/183 (2%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHF 60 K+EW L + L A++ TL + V++LI G A R+ SD + I F Sbjct: 49 KWEW--LQYAQVQRDLGNAVLSTLQAFAAAAVLALIFGAIFAAGRL--SDHAWVRGIAGF 104 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V FR P L+ +FV ++GLP +G+ F+ ++ LTL + ++E+ R+ I S+PKG Sbjct: 105 VVEFFRAIPALILMFVFYFGLPTVGVPTSPFLGVVFGLTLYNGSVLAEVFRAGIQSLPKG 164 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+YA+G+ + Q + ++LPQ + + S+ + +LK T++ IT E+ A+ Sbjct: 165 QSEAAYALGMRKTQVMFLVLLPQAVRAMLPTIISQLVVLLKDTALGFIITYQELLYYARY 224 Query: 181 IVS 183 I S Sbjct: 225 IGS 227 >gi|73661927|ref|YP_300708.1| amino acid ABC transporter permease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494442|dbj|BAE17763.1| ABC-type amino acid transport system permease component [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 232 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/165 (32%), Positives = 88/165 (53%), Gaps = 13/165 (7%) Query: 65 FRGTPLLVQLFVIFYGLP------------HIG-IVFDSFVAIIISLTLNFSAYISEIIR 111 FR TPL+VQLF+++YGLP HI +F + I +L+ AY+SE I+ Sbjct: 58 FRSTPLIVQLFIVYYGLPAFILFLNEHLQWHINPDIFSPLIIAFIVFSLHAVAYLSESIK 117 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S + S+ Q +A+ ++GLTR + I+LPQ + + ++FI ++K TS+A + + Sbjct: 118 SGLQSVDYEQIEAAQSVGLTRFHIYKEIVLPQAFAYALPNIENQFIMLIKGTSLAFAVQV 177 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 EI + I + Y+ + +Y A Y +L I K+E+S Sbjct: 178 TEIMAVSHIIANEGYRFITVYTVAAMFYWLLAMILEYIFNKMETS 222 >gi|163857136|ref|YP_001631434.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella petrii DSM 12804] gi|163260864|emb|CAP43166.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella petrii] Length = 197 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 87/156 (55%), Gaps = 4/156 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV +FRGT LVQLF +Y LP G+ + I+ L N AY +E++R +I+++ G Sbjct: 38 YVEVFRGTSALVQLFWFYYVLPLFGLKLPAVTVGIVVLAANAGAYGAEVVRGAILAVAPG 97 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+ +T + +R I+LPQ P + I +LK+T++ S ITI ++ Q Sbjct: 98 QREAAVALNMTPGRIMRRIVLPQAFPAMLPPAGNLLIELLKNTALVSLITITDLTFRGQM 157 Query: 181 IVSTTYQPLIIYCELAFVY----LILTSFCYIIQIK 212 + + T + ++ L +Y L++T+ +++ + Sbjct: 158 LRAETLRTTEVFILLLLLYFAVALVITAGIRLLERR 193 >gi|113868712|ref|YP_727201.1| ABC transporter permease [Ralstonia eutropha H16] gi|113527488|emb|CAJ93833.1| ABC-type transporter, permease component: PAAT family [Ralstonia eutropha H16] Length = 227 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 110/193 (56%), Gaps = 3/193 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y++ F+ + + LL + +TL ++ + V ++G +AV+R + Sbjct: 1 MDYQFDFSFLSTGWRDLL-DGVWLTLRMSVATIVFGFVLGTALAVVRTQ-GPAWARRCVT 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TPL++Q F +F+GL + + + A +++L +N SAY +EI+R+ I S+P+ Sbjct: 59 VYVDVIRNTPLVIQAFWLFFGLAAVQVRVPAMAAAVVALVVNVSAYTTEIVRAGIESVPR 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ +GL+R Q +R ++LPQ + L S+F+ ++ +TS+ S I+ E+ Sbjct: 119 GQLEAASCLGLSRWQMLRLVVLPQAVERMYPALISQFVLMMLATSIMSQISAEELTAVGY 178 Query: 180 RIVSTTYQPLIIY 192 RI S T++ IY Sbjct: 179 RIQSETFRGFEIY 191 >gi|326776168|ref|ZP_08235433.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] gi|326656501|gb|EGE41347.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] Length = 215 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 117/203 (57%), Gaps = 13/203 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVW 63 N+++D+FP+ + T+ I +S VI+L++G IA R+ + + + +F +V Sbjct: 2 NVLLDNFPEF-RDGFIGTVSITAVSSVIALVLGVIIAGFRV----SPVPPLRYFGTAWVT 56 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIII-SLTLNF--SAYISEIIRSSIISIPKG 120 + R TPL + + F+ +P I +F ++ SL L F S+++ E +RS I ++P G Sbjct: 57 LMRNTPLTLLFLIFFFVVPEI--LFPGMSPFVLGSLALGFYTSSFVCEAVRSGINTVPLG 114 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ +IG+T QT++ ++LPQ T PLSS FI++ K++++A ++ E+F + Sbjct: 115 QAEAARSIGMTFAQTLQIVVLPQATRTVIPPLSSIFIALTKNSAIAGAFSVAELFGWQKL 174 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + Y + ++ +A YL++T Sbjct: 175 MSDKGYDIVPVFIWVAIGYLVVT 197 >gi|261368433|ref|ZP_05981316.1| amino acid ABC transporter, permease protein [Subdoligranulum variabile DSM 15176] gi|282569524|gb|EFB75059.1| amino acid ABC transporter, permease protein [Subdoligranulum variabile DSM 15176] Length = 219 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 71/127 (55%), Gaps = 7/127 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVF-------DSFVAIIISLTLNFSAYISEIIRSS 113 +VWI RGTPL++Q+ VI+ G +G VA +++ +N++ Y SEI R Sbjct: 54 FVWIIRGTPLMLQILVIYLGPGLLGFTSPWPSGSSGRLVAAVVAFAINYACYFSEIYRGG 113 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++PKGQ +A +G+TR Q + L Q I P+ +E I+++K TS+A+ I + Sbjct: 114 IEAVPKGQTEAGQVLGMTRSQIFFKVTLLQVIKRILPPMGNEIITLVKDTSLANVIANKD 173 Query: 174 IFQTAQR 180 I A+ Sbjct: 174 IIMMAKE 180 >gi|170016505|ref|YP_001727424.1| ABC-type amino acid transport system, permease component [Leuconostoc citreum KM20] gi|169803362|gb|ACA81980.1| ABC-type amino acid transport system, permease component [Leuconostoc citreum KM20] Length = 219 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 100/181 (55%), Gaps = 17/181 (9%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 L + +T+ ++ IS ++SLI G + +I R+ + + I + + R PLL+ Sbjct: 18 LLGGLGITVGVSIISVILSLIFGSVVGIIQFERLPYFSKFVGTINN----VIRNLPLLLI 73 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 +F +++ LP IGI F A +++++ SA ++EI+R + SI GQ++ + A GL+ Sbjct: 74 IFFVYFALPKIGIHLPIFWATVVAMSTFESAMLAEIVRGGLESIDIGQFEGARANGLSNM 133 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 QT+ +IILPQ P+ S+ IS++K TS+A I + E+ TY+ IIY Sbjct: 134 QTMIYIILPQAYKKMIPPIISQLISLVKDTSLAMGIVLAEM----------TYRSQIIYA 183 Query: 194 E 194 + Sbjct: 184 Q 184 >gi|295100980|emb|CBK98525.1| L-glutamate ABC transporter membrane protein/L-aspartate ABC transporter membrane protein [Faecalibacterium prausnitzii L2-6] Length = 246 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 8/180 (4%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL A + ++ IIG + ++ S ++ +I YV + TPLL+QL ++Y L Sbjct: 27 TLQTAVCALALAFIIGAALGLMSTSGSK-LLRIIARIYVEFVQNTPLLLQLCFLYYALAF 85 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 G+ II+L + AY+ E++R++I S+PKGQ++A+ A G Q + +IILPQ Sbjct: 86 AGVSLGVIRTGIIALGVYTGAYMGEVVRAAIESVPKGQFEAAQAQGFNYLQRMGYIILPQ 145 Query: 144 TITTSAVPLSSEFISILKSTSV------ASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 +I P+ ++ +++ K+TS A I++ F T Y P I C L F Sbjct: 146 SIPVMLPPMVNQVVNLFKNTSCLYIVGGADLISVTYSFVTGAS-TGGAYAPAYIVCGLIF 204 >gi|253687585|ref|YP_003016775.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754163|gb|ACT12239.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 246 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 101/178 (56%), Gaps = 14/178 (7%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VT+ ++ +++I+ ++G ++R + ++ I YV +FR PL+VQ F + Sbjct: 27 SGLQVTVTLSICAWIIAFLVGSLFGILRTV-PNRFVAGIGTCYVELFRNVPLIVQFFTWY 85 Query: 79 YGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 +P IG+ F + F++ +I L L +A + E +R+ I S+P+GQ A Sbjct: 86 LVVPELLPASIGMWFKAELDPNIQFFLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAG 145 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+GLT QT R+++LP PL+SE ++++K++++ASTI + ++ A +++ Sbjct: 146 LAMGLTLPQTYRYVLLPNAYRVIVPPLTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 >gi|213420764|ref|ZP_03353830.1| putative amino acid ABC transporter [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 227 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/228 (29%), Positives = 112/228 (49%), Gaps = 16/228 (7%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---DTIISLIMHFY 61 +FN + + P +V + C +I I GF +I F S ++ I Y Sbjct: 8 FFNDLTEQLP-----LVVDGIKETCKLALIVSITGFLWGIIIFFLSLSHRPVVKAITRLY 62 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + F GTPL++ LFVI+YGLP GI SF + TLN AY + + ++ ++ K + Sbjct: 63 MDFFIGTPLILILFVIYYGLPQSGIHLSSFTVAVTGFTLNVGAYNAAYMTTAYNALNKYE 122 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ GL ++Q IILPQ + +S L+++ I+ LK +++ I E F Q + Sbjct: 123 TEAAVVQGLNKRQVFLWIILPQVLLSSIPALTNQVINNLKDSTIVFLIQYTEFFARIQEV 182 Query: 182 VSTTYQPLIIYCELAF----VYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T+++ + L F VYLI +F + +E + +H Y D Sbjct: 183 AATSFK---FFHALPFLSAIVYLIGVTFIVGLTRFLEHRLLRH-YGQD 226 >gi|56697507|ref|YP_167875.1| polar amino acid ABC transporter permease [Ruegeria pomeroyi DSS-3] gi|56679244|gb|AAV95910.1| polar amino acid uptake family ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 264 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 49/153 (32%), Positives = 83/153 (54%), Gaps = 7/153 (4%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFD------SFVAIIISLTLNFSAYISEIIRSSIISI 117 +FR +P LV LF++ LP +F +++ ++ L+L A ISEI+R +I S+ Sbjct: 97 LFRNSPWLVILFIVMLALPFEVTIFGKAYFVPAWIKAVVGLSLPIMANISEIVRGAIRSV 156 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ- 176 P QW+A+ A+ TR+QT+ IILPQ P + + + +T + S + + E+ Sbjct: 157 PNTQWEAAEALAFTRQQTMWRIILPQCFKRMIPPWMNWYAILTMATPLVSILGVEEVMNL 216 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYII 209 T Q IV+ +P ++ FV L+ ++CY I Sbjct: 217 TRQAIVAEENRPELLMPFYGFVLLLFFAYCYPI 249 >gi|218510849|ref|ZP_03508727.1| putative amino acid ABC transporter, permease protein [Rhizobium etli Brasil 5] Length = 271 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 99/190 (52%), Gaps = 22/190 (11%) Query: 53 IISLIMHFYVWIFRGTPLLVQLF-VIFYGLPHIGIVFDSFVA------------------ 93 ++ I FY+ I RG P+LV LF V F G P + ++ ++ Sbjct: 80 VLRQIARFYIEIIRGIPILVLLFYVAFVGAPGLVAAYNVIISPLVPAGIAEPILVRDLSL 139 Query: 94 ---IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 II+L + +S++I+EI R+ S+ GQ +A+ ++GL+R + R ++ PQ I Sbjct: 140 MWRAIIALMIGYSSFIAEIFRAGFQSVDIGQIEAAKSLGLSRYRRFRLVVFPQAIRVIFP 199 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 PLS++F+S++K +S+ S + + +I Q + S +++ Y + ++YLILT + Sbjct: 200 PLSNDFVSMVKDSSLVSVLGVADITQMGKVYASGSFRFFETYSIVTYIYLILTIGLSLAL 259 Query: 211 IKIESSVTQH 220 +IE + Q Sbjct: 260 RRIEKKMKQK 269 >gi|148988974|ref|ZP_01820374.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] gi|182683539|ref|YP_001835286.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] gi|303253933|ref|ZP_07340054.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS455] gi|147925471|gb|EDK76548.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] gi|182628873|gb|ACB89821.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] gi|301801477|emb|CBW34169.1| putative amino acid ABC transporter, permease protein [Streptococcus pneumoniae INV200] gi|302599109|gb|EFL66134.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS455] Length = 225 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 90/157 (57%), Gaps = 6/157 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G F + I+ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAMVLGIFFGAMSTS-KRPILRILARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLP----HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 FYGLP HI I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHI-IMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYI 135 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R I LPQ PL+++ ++++K+TS + I+ Sbjct: 136 SAMRLITLPQAFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|160895678|ref|YP_001561260.1| polar amino acid ABC transporter inner membrane protein [Delftia acidovorans SPH-1] gi|160361262|gb|ABX32875.1| polar amino acid ABC transporter, inner membrane subunit [Delftia acidovorans SPH-1] Length = 242 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 45/141 (31%), Positives = 76/141 (53%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV R TP LVQL +F+GLP +G+ + + A +++ +N AYI+EI+R+ I +G Sbjct: 60 YVEGIRNTPFLVQLMFVFFGLPSLGVQINEWQACLLTTVINLGAYITEIVRAGIQETQRG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+G+ R RH++L + LSS+ + ++ TSV S I ++ A Sbjct: 120 QLEAAGALGMGRWALFRHVVLRPALQRVWPSLSSQIVIVMLGTSVVSQIAAQDLTFAANF 179 Query: 181 IVSTTYQPLIIYCELAFVYLI 201 I S ++ Y + Y + Sbjct: 180 IQSRNFRAFETYLVVTAAYFV 200 >gi|26991431|ref|NP_746856.1| amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] gi|24986504|gb|AAN70320.1|AE016673_5 amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] Length = 213 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/181 (32%), Positives = 105/181 (58%), Gaps = 3/181 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + ++F + +++GF I +R+ ++S++ V R P +V LF IF+G+ Sbjct: 15 TIAVTVLAFCVGVVLGFPICALRMS-RVKVLSILAAMLVLTLRSIPPIVWLFFIFFGIGG 73 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 I F A ++ L L +A++SE+ R + +IP GQ++A+Y + L+ Q ++LPQ Sbjct: 74 GYISLSPFTAAVVGLGLITAAHMSEVYRGAFAAIPAGQFEAAYVLNLSAPQRFFDVVLPQ 133 Query: 144 TITTSAVPLSSEF-ISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + A+P S+ + I +LK ++VASTI + EI A ++ T+Q L +Y A VYL+L Sbjct: 134 LVRI-AIPTSATYAIGLLKDSAVASTIGVGEISFQAYQVSQQTFQGLSVYTAAAVVYLVL 192 Query: 203 T 203 + Sbjct: 193 S 193 >gi|302059461|ref|ZP_07251002.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] Length = 236 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 13/182 (7%) Query: 35 SLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL---------P 82 S+ IGFF+++ I + + + FY ++FRGTPL +QL + + G+ P Sbjct: 33 SIAIGFFVSIPLSIARVSRNRWVRWPVQFYTYLFRGTPLYIQLLICYTGIYSIAAVREQP 92 Query: 83 HIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + F D+ I++ TLN AY +EI +I S+ G+ +A+ A GLT + ++I+ Sbjct: 93 MLDAFFRDAMNCTILAFTLNTCAYTTEIFAGAIRSMAHGEVEAAKAYGLTGWKLYAYVIM 152 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 P + S S+E I +L ST+VA T T+P+I + A+ S T+ + A +YL Sbjct: 153 PSVLRRSLPYYSNEVILMLHSTTVAFTATVPDILKVARDANSATFMTFQSFGIAAVMYLT 212 Query: 202 LT 203 +T Sbjct: 213 VT 214 >gi|168492769|ref|ZP_02716912.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC3059-06] gi|183577030|gb|EDT97558.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC3059-06] Length = 225 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 90/157 (57%), Gaps = 6/157 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G F + I+ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAMVLGIFFGAMSTS-KRPILRILARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLP----HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 FYGLP HI I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHI-IMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYI 135 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R I LPQ PL+++ ++++K+TS + I+ Sbjct: 136 SAMRLITLPQAFCIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|241114115|ref|YP_002973590.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] gi|240868688|gb|ACS66346.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] Length = 229 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 112/212 (52%), Gaps = 11/212 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 +++W + I ++P L+ + T + S + +G +A+ R+F +++ + Y Sbjct: 4 QFDWSS-IPRAWPYLV-EGLATTGGLVAASITAGIALGTVLAIGRLF-GPRPVTMTVAAY 60 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI--GIVFDSFV------AIIISLTLNFSAYISEIIRSS 113 V +FR PL++ +F F+ +P + + D ++ A + + L SAY EIIR+ Sbjct: 61 VNVFRSIPLILTIFWFFFLVPAMLRAVTGDPYLTVGPIWAALAAFILAESAYYCEIIRAG 120 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I S+ GQ A+ A+GLT+ Q +RH+ILPQ L ++ I++LK TS+ I++ + Sbjct: 121 IGSVKTGQLSAAKALGLTQWQALRHVILPQAFRNMTPSLINQTIALLKDTSLVYVISLTD 180 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSF 205 A +I + + +Y A VYL+L SF Sbjct: 181 FLGAAGKIGQRDGRLVEMYLFSAAVYLVLCSF 212 >gi|107026980|ref|YP_624491.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116691823|ref|YP_837356.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|105896354|gb|ABF79518.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia cenocepacia AU 1054] gi|116649823|gb|ABK10463.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia cenocepacia HI2424] Length = 229 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 107/219 (48%), Gaps = 12/219 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +I F LL+A V T+ +A +S SLI+G A ++ ++ ++ + FY + R Sbjct: 1 MIFQGFGPLLWAGTVETVKLAVLSLAASLILGLAGAAAKLS-ANRVLKSVGTFYTTLIRA 59 Query: 68 TPLLVQLFVIFYG-----------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 P LV + ++FYG L I D F A +++L + AY +E R + ++ Sbjct: 60 VPDLVLMLLLFYGIQILLNNVTDLLGWDQIDIDPFAAGVVTLGFIYGAYFTETFRGAFLA 119 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ +A +A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + Sbjct: 120 VPRGQLEAGFAYGMSGWRVFHRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVK 179 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +Q +T +YL +T+ ++ +E Sbjct: 180 ASQDAGKSTLDFFFFTLAAGAIYLAITTVSNVVLHHLEK 218 >gi|72382452|ref|YP_291807.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Prochlorococcus marinus str. NATL2A] gi|72002302|gb|AAZ58104.1| amino acid ABC transporter membrane protein 1, PAAT family [Prochlorococcus marinus str. NATL2A] Length = 299 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 109/203 (53%), Gaps = 25/203 (12%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 DS+ L+ + +L + S +++ +G I R +++++ LI Y+ I R TPL Sbjct: 63 DSYAWALFIGWLNSLKVIVSSLILATFLGTLIGFARTG-TNSLLGLISAGYITIIRQTPL 121 Query: 71 LVQL----FVIFYGLPHI-------------------GIVFDS-FVAIIISLTLNFSAYI 106 L+QL FV F GL G+ F S F+A++ L++ SAYI Sbjct: 122 LLQLMFWYFVGFLGLKDNMFIQIKNIFNISNKGIEFSGLTFSSEFLALLFGLSIFTSAYI 181 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +E+IR I+S+ +GQW+A ++G++ ++ + IILPQ + L+S+++++ K++++A Sbjct: 182 AEVIRGGILSVSRGQWEAFRSLGISERKGLIRIILPQALPAIIPGLTSQYLNLAKNSTLA 241 Query: 167 STITIPEIFQTAQRIVSTTYQPL 189 + +I+ I++ T + + Sbjct: 242 IAVGYSDIYAINDTIINQTGRAI 264 >gi|307133279|ref|YP_003885295.1| putative ABC transporter membrane protein [Dickeya dadantii 3937] gi|306530808|gb|ADN00739.1| putative ABC transporter membrane protein [Dickeya dadantii 3937] Length = 250 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 107/202 (52%), Gaps = 29/202 (14%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWI 64 L+ + Q L+ VTL IA + V++ +G +A R D+ L+ Y + Sbjct: 17 LLAPQYLQWLWQGFQVTLGIAAATVVLATALGLVLAAGR----DSRTPLLRWLAIAYCSL 72 Query: 65 FRGTPLLVQLFVIFYGL--------------PHI-------GIVFDSFVAIIISLTLNFS 103 FR TPLLVQLF ++G PH+ G F+ F+A + LTL + Sbjct: 73 FRNTPLLVQLFFWYFGAAQLLPAGLMQWLNSPHVIPLLGLNGPSFE-FLAGLFGLTLYSA 131 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 A+I+E IR+ I + GQ A+ A+GLT Q +R+++LPQ + + PL ++++++K++ Sbjct: 132 AFIAEEIRAGIAGVAHGQKYAACALGLTDWQAMRYVVLPQALRIALPPLLGQYMNVIKNS 191 Query: 164 SVASTITIPEIFQTAQRIVSTT 185 S+A I + E+ ++++ + T Sbjct: 192 SLAMAIGVAELSYASRQVETET 213 >gi|326318472|ref|YP_004236144.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375308|gb|ADX47577.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 220 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 49/166 (29%), Positives = 96/166 (57%), Gaps = 2/166 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L+ D P + A+++T + +SFV +++G +A++R+F + ++ YV FR Sbjct: 6 RLLADQGPAF-WQALLLTWKLTALSFVPGVLLGMGVAMLRLFPLPPL-RWVLTLYVETFR 63 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P + L I + LP + V D +++++L L SA+ ++ +RS I +IP GQ +A+ Sbjct: 64 NIPSVALLIFIVFALPDLEFVIDYEPSVVLTLVLVCSAFTADYVRSGINTIPGGQVEAAL 123 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 ++G+ + I ++LPQ + + P++S I+++ STS+AS + P Sbjct: 124 SLGMRPARIIWSVVLPQALRSVVQPMTSLLIALMLSTSLASQVPFP 169 >gi|270263716|ref|ZP_06191985.1| transporter [Serratia odorifera 4Rx13] gi|270042600|gb|EFA15695.1| transporter [Serratia odorifera 4Rx13] Length = 246 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 103/180 (57%), Gaps = 14/180 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 +++ VT+ ++ +++I+ +G ++R + +S + YV +FR PL+VQ F Sbjct: 25 IWSGFQVTVALSVCAWIIAFFVGSLFGILRTV-PNRFLSALGTCYVELFRNVPLIVQFFT 83 Query: 77 IFYGLP-----HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P ++G+ F + F++ ++ L L +A + E +R++I S+P+GQ Sbjct: 84 WYLVVPELLPANLGMWFKTELDPNVQFFISSMLCLGLFTAARVCEQVRAAIQSLPRGQRA 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 >gi|330957237|gb|EGH57497.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 231 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 90/170 (52%), Gaps = 11/170 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIGIVFD-------SFVAIIISLTLNFSAYISEI 109 Y + RG P L+ + +I++G + +G +F +F A +I+L L F AY +E+ Sbjct: 55 YSTLVRGIPELLWVLLIYFGTVNGMRALGELFGIPNLALSAFAAGVIALGLCFGAYATEV 114 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +I++IPKG +A A+G++R + + ++LPQ + L + F+ ++K T++ S I Sbjct: 115 FRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNLFMILMKDTALVSVI 174 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + EI + AQ VS T + Y A +YL LT I +E + Sbjct: 175 GLEEIMRHAQIAVSFTKEAFTFYMVAAIMYLGLTVLAMIGMYFLEKRAGR 224 >gi|83746553|ref|ZP_00943604.1| Glutamine transport system permease protein glnP [Ralstonia solanacearum UW551] gi|207743863|ref|YP_002260255.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] gi|83726884|gb|EAP74011.1| Glutamine transport system permease protein glnP [Ralstonia solanacearum UW551] gi|206595263|emb|CAQ62190.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] Length = 230 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 50/160 (31%), Positives = 93/160 (58%), Gaps = 6/160 (3%) Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V++ RGTPLL+ +F ++ LP I G D F ++ +L + AY++EI+R+ I ++P+G Sbjct: 65 VYLVRGTPLLMVIFWAYFLLPSITGQRTDQFSTMLTALVIFDGAYLAEIVRAGIQALPRG 124 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQ 179 Q +++ ++GL+ Q +R +ILPQ + L ++ +S +K TS+ I++PE+ F T Q Sbjct: 125 QMESARSLGLSYMQAMRRVILPQALRNMLPSLVNQLVSTIKETSLGYIISLPEVSFITTQ 184 Query: 180 RIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIES 215 + + Y LA Y + LT Y+++ ++ + Sbjct: 185 ISTAVMTKSAETYGLLALSYFVMCFGLTRCAYLLERRLAA 224 >gi|271499711|ref|YP_003332736.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270343266|gb|ACZ76031.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 246 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 101/178 (56%), Gaps = 14/178 (7%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VT+ ++ ++VI+ ++G + ++R ++S I YV +FR PL+VQ F + Sbjct: 27 SGLQVTVSLSLCAWVIAFLLGSLLGILRTV-PHRLLSGIGTCYVEMFRNVPLIVQFFSWY 85 Query: 79 YGLPHI-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 +P + G+ F + F++ + L + +A + E +R+ I S+P+GQ A Sbjct: 86 LVVPELLPTKLGMWFKAELDPNIQFFLSSMFCLGMFTAARVCEQVRAGIQSLPRGQKAAG 145 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AIGLT QT R+++LP PL+SE ++++K++++ASTI + ++ A +++ Sbjct: 146 LAIGLTLAQTYRYVLLPNAYRVIVPPLTSEMLNLVKNSAIASTIGLMDMAAQAGKLLD 203 >gi|171317738|ref|ZP_02906920.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171097088|gb|EDT41941.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 255 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 120/225 (53%), Gaps = 24/225 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF--RGTPL 70 P+LL AA+ T+ + +S + S++IG +A + S WI RGTPL Sbjct: 13 MPKLL-AAVPTTVALLLLSGIASVVIGIPLA---LAASSRHAPYRWSARGWIMLIRGTPL 68 Query: 71 LVQLFVIFYGLPHI------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 LVQL++++YG I ++ D+F +++L++N AY++ I+R +I +P Sbjct: 69 LVQLYLLYYGFGQIVPREWMRDSWASPLLRDAFWYAVVALSVNEGAYVATILRGAIAGVP 128 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 G+ +A YA G+TR +R I+ P+ + L+ E I +LKST +AST+T+ ++ TA Sbjct: 129 AGEIEAGYAYGMTRAGVLRRIVGPRAWRLALPALTGEAILLLKSTVLASTVTVFDVMGTA 188 Query: 179 QRIVSTT---YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + T Y+PL A VY++L + I ++E + ++ Sbjct: 189 NTLRFETLRVYEPL---AGAAIVYVVLVALLTIPAARLEKHLNRY 230 >gi|121606346|ref|YP_983675.1| polar amino acid ABC transporter inner membrane subunit [Polaromonas naphthalenivorans CJ2] gi|120595315|gb|ABM38754.1| amino acid ABC transporter membrane protein 1, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 221 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 98/173 (56%), Gaps = 3/173 (1%) Query: 32 FVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD-- 89 +V+++++G + +R + + + + +V +FR PLLVQ+F+ ++ +P + Sbjct: 18 WVVAMVVGALMGTLRTLPNSPWLVRLGNVWVELFRNIPLLVQIFLWYFVVPKMFPAMQQI 77 Query: 90 -SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 FV ++++L SA I+E +R+ I ++ +GQ A A+G T QT R++ILP Sbjct: 78 PGFVLVVLALGFFTSARIAEQVRAGIQALARGQRYAGMALGFTTAQTYRYVILPMAFRII 137 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 PL+SE +++LK++SVA ++I E+ A + T + + IY + +Y I Sbjct: 138 LPPLTSESMNLLKNSSVAFAVSIAELTMFAMQAQEETSRGVEIYIAVTALYAI 190 >gi|22536475|ref|NP_687326.1| amino acid ABC transporter permease [Streptococcus agalactiae 2603V/R] gi|25010355|ref|NP_734750.1| hypothetical protein gbs0281 [Streptococcus agalactiae NEM316] gi|76786946|ref|YP_329015.1| polar amino acid ABC transporter permease [Streptococcus agalactiae A909] gi|76798684|ref|ZP_00780907.1| amino acid ABC transporter permease protein yjgD [Streptococcus agalactiae 18RS21] gi|77404971|ref|ZP_00782072.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] gi|77410629|ref|ZP_00786989.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] gi|22533305|gb|AAM99198.1|AE014204_16 amino acid ABC transporter, permease protein [Streptococcus agalactiae 2603V/R] gi|23094707|emb|CAD45926.1| Unknown [Streptococcus agalactiae NEM316] gi|76562003|gb|ABA44587.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus agalactiae A909] gi|76585965|gb|EAO62500.1| amino acid ABC transporter permease protein yjgD [Streptococcus agalactiae 18RS21] gi|77163344|gb|EAO74295.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] gi|77176410|gb|EAO79178.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] Length = 267 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 15/204 (7%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D+ P +L + +TL + + LI+ AV++I I+ I +V RGT Sbjct: 31 VLDAIPSIL-ERLPITLLLTVAGALFGLILALIFAVVKIN-RVKILYPIQALFVSFLRGT 88 Query: 69 PLLVQLFVIFYGLP------HIGIVFD-------SFVAIIISLTLNFSAYISEIIRSSII 115 P+LVQL + +YG+P + FD + V I + N +AY SE IR++I+ Sbjct: 89 PILVQLMLSYYGIPLFLKFLNQKYGFDWNINAIPASVFAITAFAFNEAAYTSETIRAAIL 148 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ +G+ +A+ ++G+T Q R +I+P + L + I + K TS+A I E+F Sbjct: 149 SVDQGEIEAARSLGMTSAQVYRRVIIPNAAVVATPTLINTLIGLTKGTSLAFNAGIVEMF 208 Query: 176 QTAQRIVSTTYQPLIIYCELAFVY 199 AQ + + Y+ Y +A VY Sbjct: 209 AQAQIMGGSDYRYFERYISVALVY 232 >gi|313673707|ref|YP_004051818.1| polar amino acid abc transporter, inner membrane subunit [Calditerrivibrio nitroreducens DSM 19672] gi|312940463|gb|ADR19655.1| polar amino acid ABC transporter, inner membrane subunit [Calditerrivibrio nitroreducens DSM 19672] Length = 290 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 31/203 (15%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY-------GLP 82 +SF+ LI GF I+ + +I + YV + R P L+ +F+ ++ + Sbjct: 77 LSFITGLITGFIISS-----TKGVIKELFEVYVVVLRNIPPLIVMFIFYFFIGSSFTDVL 131 Query: 83 HIGIVFDS-------------------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 ++ +F + F++ I L SAYI+EIIR I + KGQ D Sbjct: 132 NLETIFSNRLFASIITAIFTPEQIFIPFISAAIGLAFYESAYIAEIIRGGINGVEKGQID 191 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GL R Q +I++PQ I + L +F+SI+K+T++AS + IPE+ A I++ Sbjct: 192 AGIALGLNRVQVYLYIVIPQAIEKTLPSLIGQFVSIIKNTAIASIVAIPELTFQAMEILA 251 Query: 184 TTYQPLIIYCELAFVYLILTSFC 206 ++ L I+ + +Y+++ F Sbjct: 252 SSRLILEIWITIFLIYMVMNLFV 274 >gi|229591500|ref|YP_002873619.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229363366|emb|CAY50505.1| putative ABC transporter, permease [Pseudomonas fluorescens SBW25] Length = 330 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 24/215 (11%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY----------G 80 S V S+I+G +A+ R+ S + +L Y+W FR P L+ L +++ G Sbjct: 100 STVFSIILGTALALARLSGSPLLAALAWG-YIWFFRSMPALLVLIILYNFAYLYDHIVLG 158 Query: 81 LPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +P G+VF F ++ L+L +AY +EIIR +I + GQ +A+ A+GL Sbjct: 159 VPFTGVVFAEWSTVDVLSQFTVAVLGLSLMQAAYAAEIIRGGLIGVDAGQHEAAAALGLP 218 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PL 189 + I IILPQ + + +E I ++K TS+ + +PE+F T Q I + T PL Sbjct: 219 ASRRIFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPL 278 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 +I + YLI+T+ Q +E + T V Sbjct: 279 LIVATV--WYLIITTVLTSAQYYVERHFARGTARV 311 >gi|306825525|ref|ZP_07458864.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431886|gb|EFM34863.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 266 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 90/172 (52%), Gaps = 20/172 (11%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP--------HIGIVFD-----SFVAIIISLTLNFS 103 + F+V +GTP+LVQL + +YG+P G F+ + + I++ N + Sbjct: 76 LQAFFVSFLKGTPILVQLMLTYYGIPLALKAINQQWGTGFNINAIPAALFAIVAFAFNEA 135 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AY SE IR++I+S+ G+ +A+ ++G+TR Q R +I+P + L + I + K T Sbjct: 136 AYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKGT 195 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 S+A + + E+F AQ + Y+ + +A VY +++ I IES Sbjct: 196 SLAFSAGVVEVFAQAQILGGADYRYFERFISVALVY-------WVVNIGIES 240 >gi|260550664|ref|ZP_05824873.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624] gi|260406375|gb|EEW99858.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624] Length = 225 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 98/181 (54%), Gaps = 15/181 (8%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + TL + ++ + ++IG +A++R+ + TI S FYV +FRG PL+ +F+ Sbjct: 15 LKEGFIFTLTVTVLAMMGGILIGTPLAMMRLS-NSTIASNFAKFYVDLFRGIPLIQVIFI 73 Query: 77 IFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 ++ LP I G +F S +++ + +A+ SEI+RS I SI KGQ +A YA Sbjct: 74 FYFLLPKIFEFQSDTYWGPLFSS----VVTFAIFEAAFFSEIVRSGIQSISKGQVNAGYA 129 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G T Q++R+++LPQ L ++ I + + S+ I+ P+ A + + TY Sbjct: 130 LGFTYGQSMRYVVLPQAFRNMLPVLLTQTIILFQDVSLVYVISAPDFLGRADTL-ANTYG 188 Query: 188 P 188 P Sbjct: 189 P 189 >gi|332358038|gb|EGJ35871.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1056] Length = 269 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHI--------GIVFD-----SFVAIIISLTLNFS 103 I F+V RGTPLLVQL + ++G+P + G F+ + V I++ N + Sbjct: 77 IQAFFVSFLRGTPLLVQLMLTYFGIPLLLKAINQKYGTSFNINEIPASVFAIVAFAFNEA 136 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AY SE IR++I+S+ G+ +A+ ++G+T KQ +I+P + L + I + K T Sbjct: 137 AYASETIRAAILSVDSGEIEAARSLGMTNKQVYMRVIIPNAAVVATPSLINSLIGLTKGT 196 Query: 164 SVASTITIPEIFQTAQRIVSTTYQ 187 S+A + + EIF AQ I Y+ Sbjct: 197 SLAFSAGVVEIFAKAQAIAGADYR 220 >gi|197284574|ref|YP_002150446.1| arginine transporter permease subunit ArtM [Proteus mirabilis HI4320] gi|194682061|emb|CAR41584.1| arginine ABC transporter, permease protein [Proteus mirabilis HI4320] Length = 222 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 119/221 (53%), Gaps = 18/221 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++ I+D P L ++ +T ++F +S+++ F +A+ +IS I+ Y+ +F Sbjct: 2 WDYIVDILPGL-PTSLSLTFVALLVAFTLSVLMTFILAL-----KVPVISPIVKVYITLF 55 Query: 66 RGTPLLVQLFVIFYG------LPHIGIVFD----SFVAIIISLTLNFSAYISEIIRSSII 115 GTPLLVQ F+I+YG L ++++ + +++L LN +AY + + ++ Sbjct: 56 TGTPLLVQFFLIYYGPGQFPSLKEFPLLWELLSTPWFCAMVTLALNSAAYSTLLFHGAVR 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +IP GQW + A+G++ QT ++ILP + S+E + I KSTS+ASTIT+ E+ Sbjct: 116 AIPAGQWQSCQALGMSPLQT-ANVILPYAFKRALSSYSNEVVLIFKSTSLASTITLLELT 174 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 ++++ Y ++++ +YL + ++ IE Sbjct: 175 GYSRQVFGQNYD-VMVFVAAGIIYLAINGILTLLMRLIEKK 214 >gi|120403415|ref|YP_953244.1| polar amino acid ABC transporter inner membrane subunit [Mycobacterium vanbaalenii PYR-1] gi|119956233|gb|ABM13238.1| amino acid ABC transporter membrane protein 2, PAAT family [Mycobacterium vanbaalenii PYR-1] Length = 291 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 108/208 (51%), Gaps = 9/208 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K+E F L D + + I TL A +S V++L +GF + V R+ + T I + Sbjct: 50 KWEPF-LTADLWRTYVLPGIEGTLTAAAVSIVLALALGFVLGVGRLS-THTAIRWASSVF 107 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDS----FVAIIISLTLNFSAYISEIIRSSIISI 117 V FR P+L+ + ++ L VF S +I LTL A I+EI+R+ + ++ Sbjct: 108 VEFFRAVPVLIMMIFAYF-LYAFYDVFPSKHLALAGVITGLTLYNGAVIAEIVRAGVHAL 166 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P+GQ +A+ A+GLT QT+R I+LPQ IT+ L S+ + +LK T++ IT E+ + Sbjct: 167 PRGQTEAASALGLTWGQTMRSILLPQAITSMLPVLISQLVVVLKDTALGYQITFVEMVRQ 226 Query: 178 AQRIVST--TYQPLIIYCELAFVYLILT 203 I S Y P +I L + L T Sbjct: 227 GTVIGSAYGNYIPALIVIALLMIALNFT 254 >gi|328479075|gb|EGF48533.1| amino acid ABC transporter permease [Lactobacillus rhamnosus MTCC 5462] Length = 224 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 3/181 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIF-FSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 TL + ++ + SLI+G A++ I F + +I YV + R PLLV + +P Sbjct: 19 TLAASILALIGSLIVGTLFALMEISPFKP--LRVIGRIYVEVVRNIPLLVITLAFYVIVP 76 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + D F A I L + SA+I+E +R+ I ++P GQ + + +IG+T Q + II P Sbjct: 77 QFIVKIDGFTAGTIGLLIYTSAFIAETVRAGIEAVPSGQMEGARSIGMTYTQAMTQIIFP 136 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q PL ++FI+++K++SV + + ++ + I +TT+ Y + YLIL Sbjct: 137 QAFKIVIPPLGNQFINLVKNSSVLAFVAGFDLMYQGKLIAATTFSTFDTYLIVGIFYLIL 196 Query: 203 T 203 T Sbjct: 197 T 197 >gi|325688759|gb|EGD30768.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK115] Length = 286 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 93/178 (52%), Gaps = 14/178 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + V +++ A+++I ++ I F+V RGTPLLVQL + ++G+P Sbjct: 61 ITLLLTAGGAVFGILLAMVFAIVKIN-RVKVLYPIQAFFVSFLRGTPLLVQLMLTYFGIP 119 Query: 83 HI--------GIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 + G F+ + V I++ N +AY SE IR++I+S+ G+ +A+ ++G Sbjct: 120 LLLKAINQKYGTSFNINEIPASVFAIVAFAFNEAAYASETIRAAILSVDSGEIEAARSLG 179 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +T KQ +I+P + L + I + K TS+A + + EIF AQ I Y+ Sbjct: 180 MTNKQVYMRVIIPNAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYR 237 >gi|257067919|ref|YP_003154174.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] gi|256558737|gb|ACU84584.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] Length = 219 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 97/175 (55%), Gaps = 3/175 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P+LL VTL + +I+L++G +A+IR + ++S + V R TPL+V Sbjct: 17 LPKLLLEGFKVTLIATVLGTLIALVLGLMVAIIR-RSAPKLLSTPFTWVVEFIRMTPLVV 75 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 QL +F L V + V I L ++++ Y++E+ R+ I S+P GQW+A+ A+ L R Sbjct: 76 QL--VFANLVLSPYVDSTLVIGIWVLGIHYTTYMAEVYRAGIDSVPTGQWEAATALSLPR 133 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +T R +++PQ I + L + IS+ K T I IPE+ + AQ+ S+ ++ Sbjct: 134 VRTWRAVVVPQAIRNTLPALGNYAISMFKETPFFVVIYIPELVRVAQQYGSSYFR 188 >gi|318057584|ref|ZP_07976307.1| putative amino acid ABC transporter permease protein [Streptomyces sp. SA3_actG] gi|318076839|ref|ZP_07984171.1| putative amino acid ABC transporter permease protein [Streptomyces sp. SA3_actF] Length = 244 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 9/221 (4%) Query: 4 EWFNLIIDSFPQL---LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++F+L DS + L+ + T+ A ++F +S + GF +A I +I+ F Sbjct: 3 DFFSLFFDSLDDVGSGLWVTVQATVLGALVAFALSFVFGF-MANSAYLLVRGISRVIVEF 61 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FRGT L VQ+F +FY LP + G D +++ +N+ AY SE++R ++ ++P+ Sbjct: 62 ----FRGTSLYVQVFWLFYALPLLTGYQLDPLFCGVVAFGINYGAYGSEVVRGALNAVPR 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q++A+ A+ + Q +R +ILPQ +S I +LK+T + IT +I Q Sbjct: 118 AQFEAAVALNFSPVQRMRKVILPQAWVQMIPSFTSLLIMLLKATPLLWLITAVDITAVVQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ T Y L +Y +L + +E + + Sbjct: 178 QMRDRTGATAPAYLTLLVIYFVLAYLLTLGMNALERAAKKR 218 >gi|311111808|ref|YP_003983030.1| glutamine ABC transporter permease [Rothia dentocariosa ATCC 17931] gi|310943302|gb|ADP39596.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Rothia dentocariosa ATCC 17931] Length = 311 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 89/167 (53%), Gaps = 4/167 (2%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +V TL A IS + S+ G + R+ + ++ V FR P+L+ + + Sbjct: 76 GLVSTLQAAGISVITSIAFGVIFGMARLA-QNRVLRWFGTIVVEFFRAVPVLMMMIFFWL 134 Query: 80 GLPHIGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 L + S F+A++I LT + I+E++RS + +P+GQ +A AIGLT QT+ Sbjct: 135 FLSRFSWINPSQLPFLAVVIGLTFYNGSVIAELLRSGVKQLPRGQGEAGLAIGLTPGQTL 194 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 R I++PQ + S+F+ ILK T++ I+ PE+ +A+RI S Sbjct: 195 RTILMPQAFNAMMPSMLSQFVVILKDTALGYIISYPELLASARRIGS 241 >gi|237808337|ref|YP_002892777.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] gi|237500598|gb|ACQ93191.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] Length = 228 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + +++ +VT+ A +S +S ++G A + S + L+ Y + RG P L Sbjct: 4 GYGSIIFDGALVTIEQALLSVALSFLLGLIGAAAKSSQSK-LARLLSGIYTTLIRGVPDL 62 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +GI D F A +I++ + AY +E R + + +PKG Sbjct: 63 VLMLLIFYGLQIVVNGITESLGIAQLNIDPFAAGVITIGFIYGAYFTETFRGAYLMVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A G + Q R+I+ PQ + + +++ + LK+T++ S I + ++ + Q Sbjct: 123 QLEAGVAYGFSPWQAFRYILFPQLMRFALPGIANNWQVTLKATALVSIIGLSDVVKATQN 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 TYQ A VYLI T+ ++ + +E + S + Sbjct: 183 AGKGTYQFFYFTIVAAVVYLIFTTVSNLVLLWLERRYSMGVRSAE 227 >gi|312602224|ref|YP_004022069.1| Amino acid ABC transporter permease [Burkholderia rhizoxinica HKI 454] gi|312169538|emb|CBW76550.1| Amino acid ABC transporter permease protein [Burkholderia rhizoxinica HKI 454] Length = 242 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/240 (25%), Positives = 117/240 (48%), Gaps = 33/240 (13%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMH 59 M EW ++ + L VTL +A V + + GF +A+ +D ++ + Sbjct: 1 MPQEW--ILEPKYVGWLLQGFGVTLALAATVIVTATVSGFALAMAHS--ADARLVRRVAA 56 Query: 60 FYVWIFRGTPLLVQLFVIFYGL--------------PH---IGIV------FDSFVAIII 96 YV +FR +PLLVQL ++G PH +G + F+ FVA I Sbjct: 57 AYVLVFRNSPLLVQLMFWYFGAATLLPDGLMQWLNAPHAFQVGALSLRWPPFE-FVAGWI 115 Query: 97 SLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF 156 LT A++ E R+ + + GQ A+ A+GLTR Q RH++LPQ + PL ++ Sbjct: 116 GLTFYSCAFVGEEFRAGLRGVSGGQRQAAAALGLTRWQAFRHVVLPQAARNAMPPLFGQY 175 Query: 157 ISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL----ILTSFCYIIQIK 212 ++I+K++S+ I + E+ ++++ + T++ + +Y+ ++ + +++Q + Sbjct: 176 MNIVKNSSLTMAIGLAELSYASRQVETETFKTFAAFGVATALYIGTIAVIEALAHVVQRR 235 >gi|210611520|ref|ZP_03288940.1| hypothetical protein CLONEX_01130 [Clostridium nexile DSM 1787] gi|319936517|ref|ZP_08010932.1| hypothetical protein HMPREF9488_01765 [Coprobacillus sp. 29_1] gi|210151967|gb|EEA82974.1| hypothetical protein CLONEX_01130 [Clostridium nexile DSM 1787] gi|319808409|gb|EFW04964.1| hypothetical protein HMPREF9488_01765 [Coprobacillus sp. 29_1] Length = 224 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 116/204 (56%), Gaps = 6/204 (2%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ S Q L + +L I+ I+ VIS+ +G + V+ + + I+ + Y+ I R Sbjct: 9 LLKGSNMQRLLIGLWTSLRISLIAVVISIFLGLIVGVL-MTRKNIILKVFTRVYLEIVRI 67 Query: 68 TPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P LV LF++F+G + GI ++ A II + +A +++++R ++ISIPK Q++++ Sbjct: 68 MPQLVLLFIVFFGATRVFGIDIEAEKASIIVFSFWGTAEMADLVRGALISIPKHQYESAK 127 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFIS-ILKSTSVASTITIPEIFQTAQRIV--S 183 A+G++ Q HI++PQT+ +PLS I+ ++K+TS+ I + E+ + Q+I+ + Sbjct: 128 ALGMSELQIYLHIVMPQTL-RRLIPLSMNLITRMIKTTSLIMMIGVVEVLKVGQQIIEAN 186 Query: 184 TTYQPLIIYCELAFVYLILTSFCY 207 T P + A V+++ C+ Sbjct: 187 RTSSPNAAFGVFAAVFVLYFIACW 210 >gi|154705949|ref|YP_001424930.1| hypothetical protein CBUD_1592 [Coxiella burnetii Dugway 5J108-111] gi|154355235|gb|ABS76697.1| hypothetical protein CBUD_1592 [Coxiella burnetii Dugway 5J108-111] Length = 223 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/173 (32%), Positives = 99/173 (57%), Gaps = 9/173 (5%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEI 109 + +V+I RGTPLLVQ+F+I+YG ++ F +I+L +N SAY + + Sbjct: 51 NVFVFIIRGTPLLVQIFIIYYGSGQFHWLRETILWSVLKRPFGCAVIALAINTSAYTTVL 110 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 +R +I SIP G+ +A+ A+GL+R + + II+P+ I S+E I ILK TS+A TI Sbjct: 111 LRGAIRSIPTGEIEAAKALGLSRWKAYQRIIIPRAIRIVLPAYSNEVIMILKGTSLAGTI 170 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 T+ +I + +++ TY+ + ++ + +Y +L + + +E +T Y Sbjct: 171 TLMDIMGVTRHLIAMTYEVIPLFFLVGIIYFVLNALIMSVFYFLEKKLTFQYY 223 >gi|83717299|ref|YP_439606.1| histidine ABC transporter permease [Burkholderia thailandensis E264] gi|167578034|ref|ZP_02370908.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia thailandensis TXDOH] gi|167616165|ref|ZP_02384800.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia thailandensis Bt4] gi|257142743|ref|ZP_05591005.1| histidine ABC transporter, permease protein [Burkholderia thailandensis E264] gi|83651124|gb|ABC35188.1| histidine ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 229 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/219 (23%), Positives = 110/219 (50%), Gaps = 12/219 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 ++ F LL+A + T+ +A +S SL++G A ++ S+ ++ + FY + R Sbjct: 1 MLFQGFGPLLWAGTIETVKLAVLSLAASLVLGLAGAAAKLS-SNRALASVGTFYTTLIRA 59 Query: 68 TPLLVQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIIS 116 P LV + ++FYG+ +GI D FVA +++L + AY +E R + ++ Sbjct: 60 VPDLVLMLLLFYGIQILLNNATDMLGIDQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLA 119 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ +A +A G+ + I+ PQ + + + + + ++K+T++ S I + ++ + Sbjct: 120 VPRGQLEAGFAYGMGSWRVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVK 179 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +Q +T +YL +T+ ++ + +E Sbjct: 180 ASQDAGKSTLNFFFFTLAAGAIYLAITTLSNVVLMYLEK 218 >gi|115360207|ref|YP_777345.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria AMMD] gi|115285495|gb|ABI91011.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia ambifaria AMMD] Length = 229 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/219 (24%), Positives = 109/219 (49%), Gaps = 12/219 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +I F LL+A V T+ +A +S SL++G A ++ ++ + + FY + R Sbjct: 1 MIFQGFGPLLWAGTVETVKLAVLSLAASLVLGLVGASAKLS-TNRALKALGTFYTTLIRA 59 Query: 68 TPLLVQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 P LV + ++FYG+ +G I D FVA +I+L + AY +E R + ++ Sbjct: 60 VPDLVLMLLLFYGIQILLNMATDALGWDQIDIDPFVAGVITLGFIYGAYFTETFRGAFLA 119 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ +A +A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + Sbjct: 120 VPRGQLEAGFAYGMSGWRVFHRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVK 179 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +Q +T +YL +T+ ++ +E Sbjct: 180 ASQDAGKSTLDFFFFTLAAGAIYLAITTVSNVVLHHLEK 218 >gi|328956327|ref|YP_004373660.1| amino acid ABC transporter membrane protein 1, PAAT family [Coriobacterium glomerans PW2] gi|328456651|gb|AEB07845.1| amino acid ABC transporter membrane protein 1, PAAT family [Coriobacterium glomerans PW2] Length = 249 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 98/186 (52%), Gaps = 12/186 (6%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ +S+I+G + V S + + I YV ++ TPL VQ+F ++ P Sbjct: 28 TLAVSVAGLALSMILGTLLGVFSTTRSRALRA-ISRIYVEFYQNTPLPVQIFFMYMAGPQ 86 Query: 84 I---------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 I + F + + L +AY++E+IR+ I S+P+GQ +++ + G +R Q Sbjct: 87 ILQAILGAATPVRIAPFAIGSLGVGLYHAAYVAEVIRTGIESVPRGQLESARSQGFSRAQ 146 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT--YQPLIIY 192 R+I+LPQT PL ++ ++++K+TSV + I ++ A VS++ Q I+ Sbjct: 147 AYRYIVLPQTFKMILPPLCNQALNLIKNTSVLALIAGGDLMYQADNFVSSSGFLQGYIMA 206 Query: 193 CELAFV 198 C L F+ Sbjct: 207 CALYFL 212 >gi|319761714|ref|YP_004125651.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC] gi|317116275|gb|ADU98763.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans BC] Length = 248 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/208 (27%), Positives = 112/208 (53%), Gaps = 11/208 (5%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI----FFSDTIISLIMH 59 W L++ +P + VTL ++ + V++ +G +A+ R+ F S ++ Sbjct: 11 NWELLLVGQYPHGPIGGLAVTLFLSLVGIVLAFPLGVVLALCRLSPFRFLSWPATAI--- 67 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 V++ RG PL++ +F ++ +PHI G ++++L + SAY++EI+R+ + +P Sbjct: 68 --VYVVRGVPLIMFIFWTYFIVPHILGRPVAGITTMLVTLVIYQSAYLAEIVRAGMQGLP 125 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQT 177 GQ +A+ AIGL+ QT ++LPQ I + S+F+S +K T++ I++ E+ F Sbjct: 126 FGQTEAARAIGLSYMQTTFKVLLPQAIYNMVPAIISQFVSSIKDTALGYVISVNELTFAA 185 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSF 205 +Q + P +Y LA +Y ++ + Sbjct: 186 SQINANLLTMPFQVYILLASIYFVICAL 213 >gi|124486253|ref|YP_001030869.1| hypothetical protein Mlab_1437 [Methanocorpusculum labreanum Z] gi|124363794|gb|ABN07602.1| polar amino acid ABC transporter, inner membrane subunit [Methanocorpusculum labreanum Z] Length = 228 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 111/218 (50%), Gaps = 16/218 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + VTL + S +I I G + + +++ + + YVW FRG P +V LF+ Sbjct: 15 LLGGVGVTLLLVGFSLLIGFICGIILTLGQVY-GPRPVRWFVGVYVWFFRGLPNIVLLFL 73 Query: 77 --------IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 + + +P G+ + L L +AY S+I R +I S+ +GQ A+ ++ Sbjct: 74 FYFALFPFMSWDMPVFGVA-------VTVLGLRSAAYQSQIFRGAIQSLSEGQMLAARSL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+T+ Q IR IILPQ++ S S+E+ +L ++VA I + E+ +++S T +P Sbjct: 127 GMTKWQAIRSIILPQSLRLSLPGWSNEYPVLLTDSAVAYVIGVAELLTRTSQVISRTGEP 186 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 +++Y A ++++L +I IE V + ++ Sbjct: 187 MLLYLTCAVIFILLNYGGMMIIQYIEKKVRIPGFGNNE 224 >gi|124265637|ref|YP_001019641.1| putative ABC transporter protein glutamate/aspartate transmembrane subunit [Methylibium petroleiphilum PM1] gi|124258412|gb|ABM93406.1| putative ABC transporter protein, putative glutamate/aspartate transmembrane subunit [Methylibium petroleiphilum PM1] Length = 246 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/166 (31%), Positives = 93/166 (56%), Gaps = 4/166 (2%) Query: 39 GFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS---FVAII 95 G + ++R D + + + + IFR PLLVQ+F+ ++ +P + S FV ++ Sbjct: 57 GSLVGILRTL-PDKRLVFLGNAWTEIFRNVPLLVQVFLWYHVIPSLFTSLRSVPSFVLVV 115 Query: 96 ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSE 155 +L SA I+E +++ I S+P+GQ A A+GLT QT RH++LP PL+SE Sbjct: 116 FALGFFTSARIAEQVKAGIQSLPRGQSYAGLAMGLTLGQTYRHVLLPMAFRIVIPPLTSE 175 Query: 156 FISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 ++I+K++SVA ++I E+ A + T + + +Y + +Y I Sbjct: 176 SMNIIKNSSVAFAVSIAELTMFAMQAQEETSRGVEVYLAVTALYFI 221 >gi|312866307|ref|ZP_07726525.1| ABC transporter, permease protein [Streptococcus downei F0415] gi|311098001|gb|EFQ56227.1| ABC transporter, permease protein [Streptococcus downei F0415] Length = 302 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 108/208 (51%), Gaps = 14/208 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + + LI+ A+++I ++ I F+V RGTP+LVQL + +YG+P Sbjct: 80 MTLGLTIWGSIFGLILALLFAIVKIN-RVPVLYQIQAFFVSFLRGTPILVQLMLTYYGIP 138 Query: 83 ----HIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 ++ + F++ V +++ LN +AY SE IR++I ++ G+ +A+ ++G Sbjct: 139 LLLRYLNMKFNTGWNINNISPIVFAVVAFALNEAAYTSETIRAAIQAVDAGEIEAAKSLG 198 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 +T Q R +I+P + L + IS+ K TS+A + I E+F A+ I Y+ Sbjct: 199 MTNAQIYRRVIIPNAAVIATPTLINTLISLTKGTSLAFSAGIIEMFAQAKIIGGRDYRYF 258 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSV 217 Y +A +Y I++ I IE S+ Sbjct: 259 ERYISVAIIYWIVSIVIENIGRYIEKSM 286 >gi|302336263|ref|YP_003801470.1| amino acid ABC transporter membrane protein 2, PAAT family [Olsenella uli DSM 7084] gi|301320103|gb|ADK68590.1| amino acid ABC transporter membrane protein 2, PAAT family [Olsenella uli DSM 7084] Length = 280 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 106/188 (56%), Gaps = 3/188 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ + T+ ++ + +I++ +GF + + R+ S I+ + + FRG P L+ ++ Sbjct: 68 LFQGFLGTMEVSLTAGLIAIALGFVLMLGRVSGSR-ILGGLCRVVINFFRGVPSLLLIYF 126 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 F +P G+ SF I + + L S ++E+ R+ + ++P+GQ +A+Y++G+ R + + Sbjct: 127 FFMVVPQYGVRMPSFWMITLPVGLAASGVLAEVFRAGVNAVPQGQSEAAYSLGMRRMKVM 186 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI-IYCEL 195 I+ PQ + L S+ + ++K T+VA ++ P++ Q A R++ + Y L+ Y + Sbjct: 187 FKIVFPQAVRYVIPSLISQLVVVVKDTTVAYVVSYPDMLQNA-RVLISNYSALVSTYFVV 245 Query: 196 AFVYLILT 203 A +Y++L Sbjct: 246 AIIYILLN 253 >gi|254440026|ref|ZP_05053520.1| ABC transporter, permease protein, putative [Octadecabacter antarcticus 307] gi|198255472|gb|EDY79786.1| ABC transporter, permease protein, putative [Octadecabacter antarcticus 307] Length = 265 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 115/227 (50%), Gaps = 23/227 (10%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLV 72 Q L I +T+ + + F ++ IG +A++ + I+L I Y I RG P++V Sbjct: 39 QTLSKGIWITVFVTLVGFTLAASIGLGLALMSM---SRFIALRQIARLYTEIVRGVPIIV 95 Query: 73 QL-FVIFYGLPHIGIVFDSFVAI-----------------IISLTLNFSAYISEIIRSSI 114 L +V F P + +F+ I II+LT+ +SA+I+E+ R+ + Sbjct: 96 LLLYVAFVLAPGMVALFNWITGILGFDPIRNRDFSLLWRAIIALTIGYSAFIAEVFRAGL 155 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 SI KGQ +A+ A+GL+ + RHI+ PQ PL ++FI+++K +S+ S + + ++ Sbjct: 156 QSIEKGQIEAAEALGLSPWRRFRHIVFPQAFRRILPPLGNDFIAMVKDSSLVSVLGVLDV 215 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 Q + + ++ Y +A +YL +T + ++E + + + Sbjct: 216 TQAGKITAAGNFRYFETYNVVALIYLTMTIGLSLALRRLERQLREKS 262 >gi|166032312|ref|ZP_02235141.1| hypothetical protein DORFOR_02015 [Dorea formicigenerans ATCC 27755] gi|166028035|gb|EDR46792.1| hypothetical protein DORFOR_02015 [Dorea formicigenerans ATCC 27755] Length = 224 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/177 (33%), Positives = 106/177 (59%), Gaps = 5/177 (2%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F ++L A + V L I+ IS VIS+ +G + V+ + + + I I+ Y+ I R P Sbjct: 13 QNFMRML-AGLGVALKISLISVVISIPLGIVLGVL-MTWKNPITKAILRIYLEIVRIMPQ 70 Query: 71 LVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +V LF++F+G G A II T +A +S+++R ++ISIPK Q+++S A+G Sbjct: 71 MVLLFLVFFGTTRAFGWDLSGENASIIVFTFWGAAEMSDLVRGALISIPKHQYESSEALG 130 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFIS-ILKSTSVASTITIPEIFQTAQRIVSTT 185 L++ QT +II+PQT+ +PLS I+ ++K+TS+ I + E+ + +Q+I+ Sbjct: 131 LSKVQTYWYIIIPQTL-RRLIPLSINLITRMIKTTSLILMIGVVEVLKVSQQIIEAN 186 >gi|158313075|ref|YP_001505583.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EAN1pec] gi|158108480|gb|ABW10677.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EAN1pec] Length = 235 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 110/207 (53%), Gaps = 9/207 (4%) Query: 2 KYEW--FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 Y W + ++D+ + V TL ++ + V +LI+G +A +R+ + Sbjct: 14 DYGWSHIDAVLDNL-DIFREGFVQTLRLSLFAAVSALILGTGLAAMRVSPVPPL-RWAGT 71 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV R TPL + F + + LP + IVF F +++LT+ +A + E +RS + + Sbjct: 72 AYVETVRNTPLTIVFFFVVFVLPQVDIVFSYFTFAVMALTIYHTALVCEAVRSGVNGVDA 131 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ A+GLT QT+R ++LPQ PL S +++++TS+A+ + E+ +Q Sbjct: 132 GQAEAARALGLTFSQTLRLVVLPQAFRNVVQPLGSVGSALIRNTSIAAAFGVQELTGISQ 191 Query: 180 RIVSTTYQPL-IIYCELAFV--YLILT 203 R+ TT P +I LA + YL+LT Sbjct: 192 RL--TTANPGDVIAVLLAGIVCYLVLT 216 >gi|328950981|ref|YP_004368316.1| polar amino acid ABC transporter, inner membrane subunit [Marinithermus hydrothermalis DSM 14884] gi|328451305|gb|AEB12206.1| polar amino acid ABC transporter, inner membrane subunit [Marinithermus hydrothermalis DSM 14884] Length = 392 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 49/162 (30%), Positives = 96/162 (59%), Gaps = 12/162 (7%) Query: 36 LIIGFFIAVIRIFFS--DTIISLIMHFYV-WIFRGTPLLVQ-----LFVIFYGLPHIGIV 87 L +G ++A+ R ++ + +L++ + V W+ G PL + F + GL + Sbjct: 201 LAVGVYLALRRQGWARWSALGALVLAWGVGWLVSGGPLAISEPELGRFRVTGGL----TL 256 Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 F A++++L + ++YI+EI+R +I S+PKGQW+A+ ++GLT QT+R +ILPQ + Sbjct: 257 SPEFSAVLLALVIYTASYIAEIVRGAIQSLPKGQWEAATSLGLTYAQTMRLVILPQAMRI 316 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 PL ++++++ K++S+A + PE+F I + + + L Sbjct: 317 IIPPLGNQYLNLTKNSSLAIAVGYPELFNVYGTIANQSGRSL 358 Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 43/70 (61%), Gaps = 1/70 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D++ Q +A I TL +A + V++ I+G + + R+ S+ +++ + YV + R TPL Sbjct: 84 DAYWQAFFAGIYNTLRVALVGIVLTTILGVLVGIGRLS-SNWLVNRLAFAYVELVRNTPL 142 Query: 71 LVQLFVIFYG 80 LVQ+F ++G Sbjct: 143 LVQMFFWYFG 152 >gi|307730183|ref|YP_003907407.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307584718|gb|ADN58116.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 237 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S I + +AV R+ +S + Y ++FRGTPL VQL +I+ Sbjct: 21 SGLAVTLWLLVASVGIGFCVAIPLAVARVS-KKRWLSTPVRLYTYVFRGTPLYVQLLLIY 79 Query: 79 YGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D+F I++ LN AY +EI +I S G+ +A+ A Sbjct: 80 TGMYSLEFVRSHQLLDAFFRSGFHCAILAFALNTCAYTTEIFAGAIRSTSHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++ R I++P + A+PL S+E I +L +T+VA T T+P+I + A+ S TYQ Sbjct: 140 GMSWFTMYRRIVIPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYQ 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL+++ Sbjct: 199 SFDAFGLAALIYLVVS 214 >gi|221197499|ref|ZP_03570546.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2M] gi|221204172|ref|ZP_03577190.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2] gi|221176338|gb|EEE08767.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2] gi|221184053|gb|EEE16453.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2M] Length = 221 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 103/188 (54%), Gaps = 2/188 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + +TL ++ ++GF ++++R+ S + + YV FRGTPLL+QLF Sbjct: 15 LVKGLALTLAYTATCAIVGSLLGFVLSLLRMSPSRWLRGPVAA-YVEFFRGTPLLIQLFW 73 Query: 77 IFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +F+ P + + +++++ISLTL +A SE R S+ SI Q DA A+ L+ Sbjct: 74 VFFCFPVVLRLPIPPYLSVLISLTLYMAAITSETFRGSLKSIAGEQHDACIALSLSPHVK 133 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 I ++I PQ + + PL S +S+ K +++ S++ I ++ Q + ++T +P+ + Sbjct: 134 IVYVIFPQALLRAIPPLLSNVVSLFKESALISSVGIADLMFVGQNVSNSTARPVEFLTTV 193 Query: 196 AFVYLILT 203 A +Y ++ Sbjct: 194 AVIYFLVA 201 >gi|209695502|ref|YP_002263431.1| general L-amino acid ABC transporter permease protein [Aliivibrio salmonicida LFI1238] gi|208009454|emb|CAQ79740.1| general L-amino acid ABC transporter permease protein [Aliivibrio salmonicida LFI1238] Length = 365 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/195 (32%), Positives = 104/195 (53%), Gaps = 6/195 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ +++TL IA + V+SL IG +A+ R II + Y+ I+RG PL+ LF+ Sbjct: 154 LWGGLLITLVIAIVGIVVSLPIGVALALGRRS-EMPIIRSMCTIYIEIWRGVPLITVLFM 212 Query: 77 IFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G+ D +I + L +AY++E+IR + +IPKGQ++A+ A+GL Sbjct: 213 ASVMLPLFLSEGMELDKLFRALIGVVLFSAAYMAEVIRGGLQAIPKGQYEAADALGLGYW 272 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + +R IILPQ + + + + FI + K TS+ I + ++ Q +T + L Sbjct: 273 KKMRLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPEWLGFST 331 Query: 194 E-LAFVYLILTSFCY 207 E FV L+ FC+ Sbjct: 332 ESYVFVALVFWVFCF 346 >gi|81429106|ref|YP_396106.1| putative glutamine/glutamate ABC transporter, membrane-spanning/substrate-binding subunit precursor [Lactobacillus sakei subsp. sakei 23K] gi|78610748|emb|CAI55799.1| Putative glutamine/glutamate ABC transporter, membrane-spanning/substrate-binding subunit precursor [Lactobacillus sakei subsp. sakei 23K] Length = 478 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 17/208 (8%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF-------FSDTIIS 55 + +F L+ ++ +L + TL + I+ + I G F ++ + SDT+I Sbjct: 263 HSFFGLLKENKGAIL-DGLGQTLLLTVIAIFFATIFGVFFGLLGVLPNKFARAVSDTVI- 320 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 +IFRG PLLV I+ G+P + G + VA +I+L N AY + ++ I Sbjct: 321 -------YIFRGLPLLVLALFIYTGIPSLTGQKIPAMVAGVITLMFNEGAYTAAFVKGGI 373 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ GQ +A+ ++GL + +R +ILPQ I ++FI LK TS+ S I I E+ Sbjct: 374 GAVSAGQMEAARSLGLPYGKAMRRVILPQGIRIMVPSFINQFIITLKDTSILSIIGIVEL 433 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + I++ + I+ +A +YLI+ Sbjct: 434 TQAGKIIIARNLEGFKIWGMIALIYLIV 461 >gi|313500661|gb|ADR62027.1| Amino acid ABC transporter, permease protein [Pseudomonas putida BIRD-1] Length = 213 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 108/189 (57%), Gaps = 3/189 (1%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +L I T+ + ++F + +++GF I +R+ ++S++ V R P +V LF Sbjct: 7 MLLNGIPWTIAVTVLAFCVGVVLGFPICALRMS-RFKVLSILAAMLVLTLRSIPPIVWLF 65 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 IF+G+ I F A ++ L L +A++SE+ R + +IP GQ++A+Y + L+ Q Sbjct: 66 FIFFGIGGGYISLSPFTAAVVGLGLITAAHMSEVYRGAFAAIPAGQFEAAYVLNLSAPQR 125 Query: 136 IRHIILPQTITTSAVPLSSEF-ISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 ++LPQ + A+P S+ + I +LK ++VASTI + EI A ++ T+Q L +Y Sbjct: 126 FFDVVLPQLVRI-AIPTSATYAIGLLKDSAVASTIGVGEISFQAYQVSQQTFQGLSVYSA 184 Query: 195 LAFVYLILT 203 A VYL+L+ Sbjct: 185 AAVVYLVLS 193 >gi|261343375|ref|ZP_05971020.1| arginine ABC transporter, permease protein ArtQ [Providencia rustigianii DSM 4541] gi|282568515|gb|EFB74050.1| arginine ABC transporter, permease protein ArtQ [Providencia rustigianii DSM 4541] Length = 246 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 118/242 (48%), Gaps = 34/242 (14%) Query: 17 LYAAIVVTLPIACISFVISLIIG-FFIAVIRIFFSDTIISLIMHFYVWIFRGTP-LLVQL 74 L +A +T+ +A + ++ LI+ F+A + F I+ + +V + RG P LLV L Sbjct: 7 LISAAGITVGLAISALILGLILAMLFMAWESVRFKP--IAFLGTCWVTLIRGLPELLVVL 64 Query: 75 FVIFYGLPHIGIVFDS------------------------------FVAIIISLTLNFSA 104 FV F L I ++ D FV +I+L L +++ Sbjct: 65 FVYFGTLQLINLLGDGIAINLGFWQGTLQVDPSIFFADSGQFDYTPFVCGVIALALLYAS 124 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 Y S+ +R ++ ++P GQW+A A+GLT++ I+PQ + L ++++ +LK T+ Sbjct: 125 YASQTLRGALKAVPYGQWEAGLALGLTKRTIFFRFIMPQMWRHALPGLGNQWLVLLKDTA 184 Query: 165 VASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 + S I++ ++ + IV+ T++P Y + +YL +T ++ +IE T+ S Sbjct: 185 LVSLISVNDLMLQTKTIVNRTHEPFTWYAIVGLIYLAITLLSQLVLKRIELRTTRFERSE 244 Query: 225 DK 226 K Sbjct: 245 SK 246 >gi|89900316|ref|YP_522787.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89345053|gb|ABD69256.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 229 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 120/223 (53%), Gaps = 16/223 (7%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 +LY A V+T+ ++ + ++++I+G A ++ +++L Y I RG P LV + Sbjct: 9 ILYGA-VLTVGVSLAALLVAIILGLAGAGAKLSGRPILVALA-TLYTTIIRGIPELVLML 66 Query: 76 VIFYGLPHIGI--VFDS-----------FVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 ++FYG IG+ +F++ F A ++++ + AY++E R +I++IPKGQ Sbjct: 67 LVFYG-GTIGLNNLFEAMGSETTVDINPFFAGVLTIGFIYGAYMTETFRGAILAIPKGQA 125 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A++A G+ R QT I PQ + + ++ ++ ++K+T++ S I + E+ A++ Sbjct: 126 EAAWAFGMGRTQTFMRITAPQMVRYALPGFTNNWLVLIKATALVSLIGLQEMTYLAKQAS 185 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + T P + A ++LI T+ ++ ++ + + T V Sbjct: 186 AATRSPFAYFLFTAALFLIYTTVSLMVLRRLNARYSLGTKRVQ 228 >gi|332366380|gb|EGJ44131.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK355] Length = 286 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 14/178 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + V +++ A+++I ++ I F+V RGTPLLVQL + ++G+P Sbjct: 61 ITLLLTAGGAVFGILLAMVFAIVKIN-RVKVLYPIQAFFVSFLRGTPLLVQLMLTYFGIP 119 Query: 83 --------HIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 G F+ + V I++ N +AY SE IR++I+S+ G+ +A+ ++G Sbjct: 120 LLLKAINQQYGTSFNINDIPASVFAIVAFAFNEAAYASETIRAAILSVDPGEIEAARSLG 179 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +T KQ +I+P + L + I + K TS+A + + EIF AQ I Y+ Sbjct: 180 MTNKQVYMRVIIPNAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYR 237 >gi|327462432|gb|EGF08757.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1057] Length = 286 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 16/184 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL---IMHFYVWIFRGTPLLVQLFV 76 I+ LPI + V + G +A++ + + I F+V RGTPLLVQL + Sbjct: 54 GILQNLPITLLLTVGGAVFGIMLAMVFAVVKINRVKVLYPIQAFFVSFLRGTPLLVQLML 113 Query: 77 IFYGLP--------HIGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 ++G+P G F+ + V I++ N +AY SE IR++I+S+ G+ + Sbjct: 114 TYFGIPLLLKAINQQYGTSFNINDIPASVFAIVAFAFNEAAYASETIRAAILSVDLGEIE 173 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++G+T KQ +I+P + L + I + K TS+A + + EIF AQ I Sbjct: 174 AARSLGMTNKQVYMRVIIPNAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAG 233 Query: 184 TTYQ 187 Y+ Sbjct: 234 ADYR 237 >gi|331266688|ref|YP_004326318.1| ABC transporter membrane-spanning permease-amino acid transport system (aspartate/glutamate transport, putative) [Streptococcus oralis Uo5] gi|326683360|emb|CBZ00978.1| ABC transporter membrane-spanning permease-amino acid transport system (aspartate/glutamate transport, putative) [Streptococcus oralis Uo5] Length = 266 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 91/172 (52%), Gaps = 20/172 (11%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHI--------GIVFD-----SFVAIIISLTLNFS 103 + F+V +GTP+LVQL + +YG+P + G F+ + + I++ N + Sbjct: 76 LQAFFVSFLKGTPILVQLMLTYYGIPLLLKAINQQWGTGFNINAIPAALFAIVAFAFNEA 135 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AY SE IR++I+S+ G+ +A+ ++G+TR Q R +I+P + L + I + K T Sbjct: 136 AYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKGT 195 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 S+A + + E+F AQ + Y+ + +A VY +++ I IES Sbjct: 196 SLAFSAGVVEVFAQAQILGGADYRYFERFISVALVY-------WVVNIGIES 240 >gi|312115424|ref|YP_004013020.1| polar amino acid ABC transporter inner membrane protein [Rhodomicrobium vannielii ATCC 17100] gi|311220553|gb|ADP71921.1| polar amino acid ABC transporter, inner membrane subunit [Rhodomicrobium vannielii ATCC 17100] Length = 244 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 11/190 (5%) Query: 39 GFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH-----IG-----IVF 88 G + V R S ++ + YV FR PLLVQLF+ ++ LP IG + Sbjct: 48 GSIVGVCRTLPSP-LVRRLSGAYVEFFRNIPLLVQLFLWYFVLPELLPRDIGMWLKQVPH 106 Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 +F L L S+ ++ + ++I S+P+GQ A+ A+GLT +Q+ +++LP Sbjct: 107 SNFYTAAFGLGLFTSSRVAVQLAAAITSMPRGQKMAATALGLTTRQSYTNVLLPMAYRIV 166 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 PL+SE ++++K++SVA TI + E+ Q+A+ + S T+Q + +YL+L Sbjct: 167 FPPLTSELLNLIKNSSVALTIGVAELTQSARNMDSYTFQTFQAFTAATLIYLVLNITITA 226 Query: 209 IQIKIESSVT 218 + +IE V+ Sbjct: 227 VMRRIEHGVS 236 >gi|238924363|ref|YP_002937879.1| putative ABC-type polar amino acid transport system, permease protein [Eubacterium rectale ATCC 33656] gi|238876038|gb|ACR75745.1| predicted ABC-type polar amino acid transport system, permease protein [Eubacterium rectale ATCC 33656] gi|291525137|emb|CBK90724.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Eubacterium rectale DSM 17629] gi|291529374|emb|CBK94960.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Eubacterium rectale M104/1] Length = 218 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 10/168 (5%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L + + T I ++ + SL +G A + + +M+ +VW+ RGTPL++QL Sbjct: 7 QALMSGLWTTFEIFILTLIFSLPLGLIFA-FGLLSRFKPVKAVMNVFVWVIRGTPLMLQL 65 Query: 75 FVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 +IFYG P + G A +++ +N++ Y S I R I +P GQ +A Sbjct: 66 IIIFYG-PGLWLHQAIWSGDETGRITATVVAFVINYACYFSVIFRGGIEGVPAGQREAGQ 124 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +G+T++Q I L Q I P+S+E I+++K TS+A I E+ Sbjct: 125 VLGMTKQQIFFKITLLQMIKRVVPPMSNEIITLVKDTSLARIIAAYEL 172 >gi|237802192|ref|ZP_04590653.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025049|gb|EGI05105.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 231 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 90/170 (52%), Gaps = 11/170 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIGIVF-------DSFVAIIISLTLNFSAYISEI 109 Y + RG P L+ + +I++G + +G +F ++F A +I+L + F AY +E+ Sbjct: 55 YSTLVRGVPELLWVLLIYFGTVNGMRALGELFGIPDLALNAFAAGVIALGICFGAYATEV 114 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +I++IPKG +A A+G++R + + ++LPQ + L + F+ ++K T++ S I Sbjct: 115 FRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNLFMILMKDTALVSVI 174 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + EI + AQ V T + Y A +YL LT I +E + Sbjct: 175 GLEEIMRHAQIAVGFTREAFTFYMVAAVMYLCLTVLAMIGMYFLEKRAGR 224 >gi|268590403|ref|ZP_06124624.1| glutamate/aspartate ABC transporter, permease protein [Providencia rettgeri DSM 1131] gi|291314317|gb|EFE54770.1| glutamate/aspartate ABC transporter, permease protein [Providencia rettgeri DSM 1131] Length = 246 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 115/214 (53%), Gaps = 14/214 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + VT+ ++ +++I+ ++G F ++R + ++ + YV +FR PL+VQ F Sbjct: 25 LISGLEVTVTLSICAWIIAFLVGSFFGILRTV-PNRFLAFLGTAYVELFRNVPLIVQFFT 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P IG F F++ ++ L L +A ++E +R++I S+P+GQ Sbjct: 84 WYLVIPELLPRSIGDWFKMDLDPNYQFFISSMLCLGLFTAARMTEQVRAAIQSLPRGQKS 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AALAMGLTLPQTYRYVLLPNAYRVILPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 + + + Y+ + I+ +E V Sbjct: 204 YSAHAWESFTAITLAYVGINVIIMILMTLLERKV 237 >gi|328944592|gb|EGG38753.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1087] Length = 230 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/168 (30%), Positives = 96/168 (57%), Gaps = 10/168 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-----IGIVFDSF---VAIIISLTLNFSAYISEIIRS 112 Y++I R TP +V LF++FYG+P +G+ +++ V +II++ L F+A I+E+ ++ Sbjct: 59 YIFILRCTPPIVLLFLVFYGIPEFLEWWLGLDINNWSRTVFVIITMILLFAAMIAEVFKA 118 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +++PKGQ +A +IGLT QT IILPQ + L++ +++++ ++A TI Sbjct: 119 AYLAVPKGQTEAGLSIGLTPVQTFLRIILPQAFRIALPNLTTALLNLMRDAALAYTIGAV 178 Query: 173 EIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 ++ Q ++S L Y LA +Y + ++ +E S+T Sbjct: 179 DVMGAGQNLISRNLGNYSLETYTALALIYWGIALVVSLVSQLLEKSLT 226 >gi|325695202|gb|EGD37103.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK150] gi|332362966|gb|EGJ40755.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK49] Length = 286 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 93/178 (52%), Gaps = 14/178 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + V +++ A+++I ++ I F+V RGTPLLVQL + ++G+P Sbjct: 61 ITLLLTAGGAVFGILLAMVFAIVKIN-RVKVLYPIQAFFVSFLRGTPLLVQLMLTYFGIP 119 Query: 83 HI--------GIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 + G F+ + V I++ N +AY SE IR++I+S+ G+ +A+ ++G Sbjct: 120 LLLKAINQKYGTSFNINEIPASVFAIVAFAFNEAAYASETIRAAILSVDPGEIEAARSLG 179 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +T KQ +I+P + L + I + K TS+A + + EIF AQ I Y+ Sbjct: 180 MTNKQVYMRVIIPNAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYR 237 >gi|299069324|emb|CBJ40590.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum CMR15] Length = 248 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/198 (26%), Positives = 106/198 (53%), Gaps = 3/198 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L++ +P I TL ++ + V++ + +A+ R+ + S++ V+ Sbjct: 11 NWLLLLVGQYPNGPLGGIACTLILSVLGIVLAFPLSVLLALARLSPWSALRSVVTAL-VY 69 Query: 64 IFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RG PLL+ + +++ +P IG F ++ +L + Y+SE++R+ I ++PKGQ Sbjct: 70 VVRGVPLLMLILWVYFLVPLFIGRDVSGFATMLCTLVIYEGVYLSEVVRAGIEALPKGQM 129 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A+G + +R +ILPQ + + ++F+S +K T++ I +PE+ A +I Sbjct: 130 EAARALGHSYLGAMRVVILPQALYNMLPSMLAQFVSTIKETTLGYVINVPELTFAANQIN 189 Query: 183 STTY-QPLIIYCELAFVY 199 + +P I+ LA +Y Sbjct: 190 NALLSKPFQIFFLLAVIY 207 >gi|296139760|ref|YP_003647003.1| polar amino acid ABC transporter inner membrane subunit [Tsukamurella paurometabola DSM 20162] gi|296027894|gb|ADG78664.1| polar amino acid ABC transporter, inner membrane subunit [Tsukamurella paurometabola DSM 20162] Length = 307 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/240 (27%), Positives = 119/240 (49%), Gaps = 27/240 (11%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 +++W F + A+ T+ + I V+ ++G +A+ R+ + + S F Sbjct: 56 RFDWPTFGAYLFSPTVLEALWFTVQLTFIGAVLGFLLGGVLALARLSGNRVLASFSFGF- 114 Query: 62 VWIFRGTPLLVQLFVIFYGL-----PHIGI---------------VFDSFVAIIISLTLN 101 VW+FR PL+VQ ++F+G P +GI + + A +I + L+ Sbjct: 115 VWVFRSVPLIVQ--ILFFGYLGALYPTLGIGIPFGPTFADAPTKDLLSPYTAAVIGIVLH 172 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 +AY SEI+R+ I+ + GQ DA+ A+G+ + I LPQ + T P ++E I +LK Sbjct: 173 QAAYGSEIVRAGILGVAPGQHDAARALGIPPVAHLLRITLPQALRTIVPPAANEVIGLLK 232 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T+ + +P++F Q I + PL++ +A+ Y ILT+ I Q +E +++ Sbjct: 233 GTTAVFILALPDLFYQVQVIYGRNGRIIPLLL-VAVAW-YAILTTVLSIGQHSVEKRLSR 290 >gi|13488461|ref|NP_109468.1| ABC transporter [Mesorhizobium loti MAFF303099] gi|14028215|dbj|BAB54807.1| ABC transporter [Mesorhizobium loti MAFF303099] Length = 232 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 46/147 (31%), Positives = 81/147 (55%), Gaps = 3/147 (2%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 +R + ++V LFV +Y LP +G+ + + L LN Y S+ +R+ + S+P GQ +A Sbjct: 70 WRSSAVVVLLFVFYYVLPVMGVTLSALTVSALVLGLNTGGYASQAVRAGLQSLPAGQREA 129 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+GL+R + I LPQ + T + + I ++K+TS+ S +T+ ++ A+ I T Sbjct: 130 GMALGLSRPAILLLIELPQALVTMSPTFINNLIQLVKATSLVSLVTLTDMTFRAKEIAQT 189 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQI 211 Y P+ IY L + ++ CY I + Sbjct: 190 QYDPVAIYSALLLAFFVV---CYPIAL 213 >gi|324994093|gb|EGC26007.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK678] Length = 286 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 93/178 (52%), Gaps = 14/178 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + V +++ A+++I ++ I F+V RGTPLLVQL + ++G+P Sbjct: 61 ITLLLTAGGAVFGILLAMVFAIVKIN-RVKVLYPIQAFFVSFLRGTPLLVQLMLTYFGIP 119 Query: 83 HI--------GIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 + G F+ + V I++ N +AY SE IR++I+S+ G+ +A+ ++G Sbjct: 120 LLLKAINQKYGTSFNINEIPASVFAIVAFAFNEAAYASETIRAAILSVDPGEIEAARSLG 179 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +T KQ +I+P + L + I + K TS+A + + EIF AQ I Y+ Sbjct: 180 MTNKQVYMRVIIPNAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYR 237 >gi|307316994|ref|ZP_07596435.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306897082|gb|EFN27827.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] Length = 384 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 96/170 (56%), Gaps = 6/170 (3%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 WF L P L+ ++VTL ++ + +SL +G +A+ R + +I ++ ++ + Sbjct: 162 WFGLTYVETP--LWGGLMVTLVLSFVGIAVSLPLGILLALGRRS-NMPVIKMLCTVFIEV 218 Query: 65 FRGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 RG PL+ LF+ LP G+ FD F+ +I ++L SAY++E++R + +IPKGQ Sbjct: 219 IRGVPLITVLFMASVMLPLFLPQGVTFDKFLRALIGVSLFASAYMAEVVRGGLQAIPKGQ 278 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++ + ++GL+ Q + I+LPQ + + + FI + K TS+ S I + Sbjct: 279 YEGADSLGLSFWQKMGFIVLPQALKLVIPGIVNTFIGLFKDTSLVSIIGM 328 >gi|121607337|ref|YP_995144.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121551977|gb|ABM56126.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 234 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 13/215 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 AA VTL +A S + ++ +G A ++ ++ + Y + RG P LV + + F Sbjct: 9 AAASVTLEMAAGSLLAAIALGLSGAWAKLC-GGRWLAAVAGAYTTLVRGVPDLVLMLLFF 67 Query: 79 YGLPHI------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 YG+P + G A + +L L F Y++E R +I++IPKGQ +A+ Sbjct: 68 YGVPALVQLALDKSGSDAGFDVSPLGAGLATLGLIFGGYLTETFRGAILAIPKGQIEAAC 127 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A GL R + I+LPQ + ++ ++ ++KST++ S + + +I A+ T Sbjct: 128 AFGLGRLRIAWRIVLPQMARLALPGFTNTWLVLVKSTALVSVLGLEDIMFRAKNAAQATR 187 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 QP + A VYL +T+ + +E T Sbjct: 188 QPFTFFLLTAAVYLSITTVSMLALRWLERRGAHDT 222 >gi|15965229|ref|NP_385582.1| general L-amino acid transport permease ABC transporter protein [Sinorhizobium meliloti 1021] gi|307309252|ref|ZP_07588920.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|15074409|emb|CAC46055.1| Probable general L-amino acid transport permease ABC transporter [Sinorhizobium meliloti 1021] gi|306900253|gb|EFN30870.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 384 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 96/170 (56%), Gaps = 6/170 (3%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 WF L P L+ ++VTL ++ + +SL +G +A+ R + +I ++ ++ + Sbjct: 162 WFGLTYVETP--LWGGLMVTLVLSFVGIAVSLPLGILLALGRRS-NMPVIKMLCTVFIEV 218 Query: 65 FRGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 RG PL+ LF+ LP G+ FD F+ +I ++L SAY++E++R + +IPKGQ Sbjct: 219 IRGVPLITVLFMASVMLPLFLPQGVTFDKFLRALIGVSLFASAYMAEVVRGGLQAIPKGQ 278 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++ + ++GL+ Q + I+LPQ + + + FI + K TS+ S I + Sbjct: 279 YEGADSLGLSFWQKMGFIVLPQALKLVIPGIVNTFIGLFKDTSLVSIIGM 328 >gi|327472725|gb|EGF18152.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK408] Length = 286 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 93/178 (52%), Gaps = 14/178 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + V +++ A+++I ++ I F+V RGTPLLVQL + ++G+P Sbjct: 61 ITLLLTAGGAVFGILLAMVFAIVKIN-RVKVLYPIQAFFVSFLRGTPLLVQLMLTYFGIP 119 Query: 83 HI--------GIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 + G F+ + V I++ N +AY SE IR++I+S+ G+ +A+ ++G Sbjct: 120 LLLKAINQKYGTSFNINEIPASVFAIVAFAFNEAAYASETIRAAILSVDPGEIEAARSLG 179 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +T KQ +I+P + L + I + K TS+A + + EIF AQ I Y+ Sbjct: 180 MTNKQVYMRVIIPNAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYR 237 >gi|319744241|gb|EFV96606.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus agalactiae ATCC 13813] Length = 267 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 112/230 (48%), Gaps = 21/230 (9%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D+ P +L + +TL + + LI+ AV++I I+ I +V RGT Sbjct: 31 VLDAIPSIL-ERLPITLLLTVAGALFGLILALIFAVVKIN-RVKILYPIQALFVSFLRGT 88 Query: 69 PLLVQLFVIFYGLP--------------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 P+LVQL + +YG+P +I + S AI + N +AY SE IR++I Sbjct: 89 PILVQLMLSYYGIPLFLKFLNQQYGFDWNINAIPASVFAIT-AFAFNEAAYTSETIRAAI 147 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +S+ +G+ +A+ ++G+T Q R +I+P + L + I + K TS+A I E+ Sbjct: 148 LSVDQGEIEAARSLGMTSAQVYRRVIIPNAAVVATPTLINTLIGLTKGTSLAFNAGIVEM 207 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVY----LILTSFCYIIQIKIESSVTQH 220 F AQ + + Y+ Y +A VY ++ I+ K+ +H Sbjct: 208 FAQAQIMGGSDYRYFERYISVALVYWAVSFLIEQLGNAIERKMAIKAPRH 257 >gi|186471954|ref|YP_001863272.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184198263|gb|ACC76226.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 243 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 101/188 (53%), Gaps = 25/188 (13%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL- 81 +TL + + V + ++GF +A+ R S +++ YV +FR +PLLVQL ++G Sbjct: 19 LTLLLCACAIVTATLLGFALALARNARSR-VVARAASLYVLVFRNSPLLVQLLFWYFGAA 77 Query: 82 -------------PH---IGIV------FDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 PH +G+ F+ FVA + LT + ++ E R+ I + Sbjct: 78 TLLPRSMMEWLNAPHAISLGVFTLAWPPFE-FVAGWVGLTCYATTFVGEEFRAGIRGVAS 136 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ A+ A+GLT T RH+ILPQ I + PL+ ++++I+K++S+ I + E+ T++ Sbjct: 137 GQHRAAAALGLTPFATFRHVILPQAIRIATPPLAGQYMNIVKNSSLTMAIGLAELSYTSR 196 Query: 180 RIVSTTYQ 187 +I + T++ Sbjct: 197 QIDTETFK 204 >gi|317009779|gb|ADU80359.1| ABC-type transport system, permease; putative amino-acid transporter GlnP1 [Helicobacter pylori India7] Length = 217 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 106/201 (52%), Gaps = 5/201 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + ++ S P L + +TL I+ ++SL++GF A+I ++F IS I++ Sbjct: 1 MALDW-DFMLHSIPAFL-KGLELTLYISFFGILLSLLVGFLCAII-LYFKTRFISPIVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QRESALSLGFGPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQPLIIYCELAFVYLI 201 + Y+ L+ YLI Sbjct: 176 FIGIYYKTTESLLMLSLTYLI 196 >gi|146311739|ref|YP_001176813.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter sp. 638] gi|145318615|gb|ABP60762.1| amino acid ABC transporter membrane protein, PAAT family [Enterobacter sp. 638] Length = 306 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/237 (29%), Positives = 118/237 (49%), Gaps = 20/237 (8%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++EW F ++ + TL + I +S++IG +A+ R+ S + SL Y Sbjct: 40 RWEWAVFARWFFDPVILEGVGQTLLLTLIGTALSVVIGGMLALARLSSSWLLSSLAWG-Y 98 Query: 62 VWIFRGTPLLVQLFVIFY----------GLPHIGIVFDSFVAI---------IISLTLNF 102 +W+FR PL+V L +++ G+P I + SF I ++ LTL Sbjct: 99 IWLFRSLPLIVVLIILYNFSYLYDTLSLGVPFTSITWGSFETINVLGQFSTAVVGLTLVQ 158 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 SAY +EIIR + + GQ++A+ A+GL + IILPQ + T +E IS+ K Sbjct: 159 SAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTILPAGFNEIISLAKG 218 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ + +PE+F T Q I + T + + + A YL++T+ IQ +E + + Sbjct: 219 TAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAVWYLVITTVLSAIQHIVERGLAR 275 >gi|324991750|gb|EGC23682.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK353] Length = 286 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 93/178 (52%), Gaps = 14/178 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + V +++ A+++I ++ I F+V RGTPLLVQL + ++G+P Sbjct: 61 ITLLLTAGGAVFGILLAMVFAIVKIN-RVKVLYPIQAFFVSFLRGTPLLVQLMLTYFGIP 119 Query: 83 HI--------GIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 + G F+ + V I++ N +AY SE IR++I+S+ G+ +A+ ++G Sbjct: 120 LLLKAINQKYGTSFNINEIPASVFAIVAFAFNEAAYASETIRAAILSVDPGEIEAARSLG 179 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +T KQ +I+P + L + I + K TS+A + + EIF AQ I Y+ Sbjct: 180 MTNKQVYMRVIIPNAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYR 237 >gi|227431441|ref|ZP_03913490.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352807|gb|EEJ42984.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 219 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 105/193 (54%), Gaps = 21/193 (10%) Query: 9 IIDSFP----QLLYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHFY 61 I D+F Q L + +T+ ++ IS ++S I G I ++ RI + + I + Sbjct: 6 IFDAFTPQNVQYLLGGLGITVGVSIISVILSFIAGSIIGIVQFERIPYFSKFVGTINN-- 63 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 I R PLL+ +F +++ LP +GI F A +++++ S+ ++EI+R + SI +GQ Sbjct: 64 --IIRNLPLLLIIFFVYFVLPKLGIHLPIFWATVVAMSTFESSMLAEIVRGGLESIDEGQ 121 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++ + A GLT QT+ +I+LPQ P+ S+ IS++K TS+A I + E+ Sbjct: 122 FEGARANGLTNIQTMIYIVLPQAYKKMIPPIISQLISLVKDTSLAMGIVLAEM------- 174 Query: 182 VSTTYQPLIIYCE 194 TY+ IIY + Sbjct: 175 ---TYRGQIIYAQ 184 >gi|145224552|ref|YP_001135230.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium gilvum PYR-GCK] gi|145217038|gb|ABP46442.1| amino acid ABC transporter membrane protein 2, PAAT family [Mycobacterium gilvum PYR-GCK] Length = 291 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 9/196 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K+E F L D + + I TL A +S V++LI+GF + V R+ + T I + Sbjct: 50 KWEPF-LTGDLWRTYVLPGIEGTLTAAAVSIVLALILGFVLGVGRLS-THTPIRWVSSVL 107 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDS----FVAIIISLTLNFSAYISEIIRSSIISI 117 V FR P+L+ + ++ L VF S +I LTL A I+EI+R+ + ++ Sbjct: 108 VEFFRAVPVLIMMIFAYF-LYAFYDVFPSKYLALAGVITGLTLYNGAVIAEIVRAGVHAL 166 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P+GQ +AS A+GLT QT+R I+LPQ +T+ L S+ + +LK T++ IT E+ + Sbjct: 167 PRGQAEASSALGLTWGQTMRSILLPQAVTSMLPVLISQLVVVLKDTALGYQITFVEMVRQ 226 Query: 178 AQRIVST--TYQPLII 191 I S Y P +I Sbjct: 227 GTVIGSAYGNYIPALI 242 >gi|322374584|ref|ZP_08049098.1| amino acid ABC transporter, permease protein [Streptococcus sp. C300] gi|321280084|gb|EFX57123.1| amino acid ABC transporter, permease protein [Streptococcus sp. C300] Length = 257 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 91/172 (52%), Gaps = 20/172 (11%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHI--------GIVFD-----SFVAIIISLTLNFS 103 + F+V +GTP+LVQL + +YG+P + G F+ + + I++ N + Sbjct: 67 LQAFFVSFLKGTPILVQLMLTYYGIPLLLKAINQQWGTGFNINAIPAALFAIVAFAFNEA 126 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AY SE IR++I+S+ G+ +A+ ++G+TR Q R +I+P + L + I + K T Sbjct: 127 AYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKGT 186 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 S+A + + E+F AQ + Y+ + +A VY +++ I IES Sbjct: 187 SLAFSAGVVEVFAQAQILGGADYRYFERFISVALVY-------WVVNIGIES 231 >gi|125718666|ref|YP_001035799.1| arginine/histidine ABC transporter permease [Streptococcus sanguinis SK36] gi|125498583|gb|ABN45249.1| ABC-type arginine/histidine transport system, permease component, putative [Streptococcus sanguinis SK36] Length = 268 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 93/178 (52%), Gaps = 14/178 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + V +++ A+++I ++ I F+V RGTPLLVQL + ++G+P Sbjct: 43 ITLLLTAGGAVFGILLAMVFAIVKIN-RVKVLYPIQAFFVSFLRGTPLLVQLMLTYFGIP 101 Query: 83 HI--------GIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 + G F+ + V I++ N +AY SE IR++I+S+ G+ +A+ ++G Sbjct: 102 LLLKAINQKYGTSFNINEIPASVFAIVAFAFNEAAYASETIRAAILSVDPGEIEAARSLG 161 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +T KQ +I+P + L + I + K TS+A + + EIF AQ I Y+ Sbjct: 162 MTNKQVYMRVIIPNAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYR 219 >gi|33592312|ref|NP_879956.1| amino acids ABC transporter, permease protein [Bordetella pertussis Tohama I] gi|33596425|ref|NP_884068.1| amino acids ABC transporter, permease protein [Bordetella parapertussis 12822] gi|33602284|ref|NP_889844.1| amino acids ABC transporter, permease protein [Bordetella bronchiseptica RB50] gi|33566194|emb|CAE37100.1| amino acids ABC transporter, permease protein [Bordetella parapertussis] gi|33571957|emb|CAE41478.1| amino acids ABC transporter, permease protein [Bordetella pertussis Tohama I] gi|33576723|emb|CAE33801.1| amino acids ABC transporter, permease protein [Bordetella bronchiseptica RB50] gi|332381729|gb|AEE66576.1| amino acids ABC transporter, permease protein [Bordetella pertussis CS] Length = 229 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 47/139 (33%), Positives = 85/139 (61%), Gaps = 2/139 (1%) Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RG PLL+ +F ++ +P + G F ++ +L + SAY+SE+IRS I +IPKGQ +A Sbjct: 69 RGMPLLMLIFWAYFAVPKLTGGSISGFWTLVTALVIYESAYLSEVIRSGIEAIPKGQIEA 128 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 S ++G+ T+R ++LPQ + ++S+F+S +K TS+ I++ E+ A ++ + Sbjct: 129 SRSLGVGYWTTMRKVVLPQALFNVLPSMTSQFVSTIKETSLGYVISVNELTFAANQVNNL 188 Query: 185 TY-QPLIIYCELAFVYLIL 202 QPL ++ LA +Y ++ Sbjct: 189 VLTQPLQVFGILAIIYFLV 207 >gi|296389384|ref|ZP_06878859.1| putative amino acid permease [Pseudomonas aeruginosa PAb1] Length = 238 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 19/168 (11%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP--------------H 83 IG +A+ R+ ++S Y+ +FR TPLLVQLF ++G+P H Sbjct: 35 IGAPLAIARLS-RRRLLSWPARAYLALFRNTPLLVQLFFWYFGVPALLPEALVSWLNTPH 93 Query: 84 IGIVFD----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + D F+A LTL SA+++E R+ I S+ Q A A+GLT++Q R + Sbjct: 94 ETPLLDWPSFEFLAAAWGLTLYTSAFVAEEFRAGIASVRPEQRAAGLALGLTQRQVWRVV 153 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +LPQ + T+ PL ++++ LK++S+A I + E+ ++++ + T++ Sbjct: 154 VLPQALRTALPPLLGQYMNALKNSSLAMAIGLAELSYASRQVETETFK 201 >gi|326792535|ref|YP_004310356.1| polar amino acid ABC transporter inner membrane protein [Clostridium lentocellum DSM 5427] gi|326543299|gb|ADZ85158.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium lentocellum DSM 5427] Length = 246 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 7/168 (4%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + I Y++I RGTP ++Q+ V+ + + D I+ +N AY++E+IR+ Sbjct: 80 LKWITRAYIYIIRGTPSVLQI-VLMWNVVFANATIDRIWVGGIAFGINSGAYMAELIRAG 138 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I I KGQ +A ++GL QT+RH+ILPQ SEFI ++K T++ I + Sbjct: 139 IQGIDKGQMEAGRSLGLGYGQTMRHVILPQAFIQMLPAFVSEFIILIKETAIIGFIGGLD 198 Query: 174 IFQTAQRIVSTTY---QPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 + + I+S T+ QPL+I + Y I+TS + +IE V Sbjct: 199 LMKAQDIIMSRTFNALQPLLI---VGVCYFIITSLLTVFMRQIEKKVN 243 >gi|172060591|ref|YP_001808243.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171993108|gb|ACB64027.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 241 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 103/199 (51%), Gaps = 7/199 (3%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + +FP+ ++L +A S V S +G + V + L++ F + FR P Sbjct: 15 VGAFPEGPLGGAALSLVLAIASAVASAGLGVALGVAMALARGPVRVLLLAF-IGFFRAIP 73 Query: 70 LLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 +L+ +F ++ +P H+ + ++ +L L AY++ + + I++ GQW A Sbjct: 74 VLMLIFWTYFLMPVLLHMDV--PGLATVVCALALVGGAYLAHAVHAGIVAAGDGQWQAGL 131 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVSTT 185 ++GLTR QT+RH++LPQ I +++++++K TS+A + +PE+ F Q Sbjct: 132 SLGLTRWQTVRHVLLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNRLM 191 Query: 186 YQPLIIYCELAFVYLILTS 204 P I+ +A +YL+L + Sbjct: 192 VYPAPIFLFVAAIYLVLCT 210 >gi|302189023|ref|ZP_07265696.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae 642] Length = 229 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 13/215 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 +TL +A S +++++G +R+ I+ + Y + RG P LV + +IFYG Sbjct: 15 LTLQLALSSMALAIVLGLIGVALRLS-PVRWIAWLGDLYSTVIRGIPDLVLILLIFYGGQ 73 Query: 81 ------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P +G I D +A I +L F AY+SE R + ++IPKGQ +A A GL Sbjct: 74 DLLNRVAPLLGFDDYIDLDPLMAGIFTLGFIFGAYLSETFRGAFMAIPKGQAEAGMAYGL 133 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + + I++PQ I + ++ ++ + K+T++ S + + ++ A++ T +P Sbjct: 134 SSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATREPFT 193 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + +A +YL++TS + +E + + D Sbjct: 194 FFLAVAAMYLVITSVSLLALRYLEKRYSVGVRAAD 228 >gi|289650400|ref|ZP_06481743.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 229 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/225 (25%), Positives = 111/225 (49%), Gaps = 18/225 (8%) Query: 18 YAAIVV-----TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 Y A+++ TL +A S +++++G +R+ I + + Y + RG P LV Sbjct: 5 YGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRGI-AWLGDLYSTVIRGIPDLV 63 Query: 73 QLFVIFYG--------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + +IFYG P +G I D +A I +L F AY+SE R + ++IPKG Sbjct: 64 LILLIFYGGQDLLNRVAPLLGFDDYIDLDPLLAGICTLGFIFGAYLSETFRGAFMAIPKG 123 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A GL+ + I++PQ I + ++ ++ + K+T++ S + + ++ A++ Sbjct: 124 QAEAGMAYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQ 183 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 T +P + +A +YL++TS + +E + + D Sbjct: 184 AADATREPFTFFLAVAAMYLVITSVSLLALRYLEKRYSVGVRAAD 228 >gi|270293028|ref|ZP_06199239.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] gi|270279007|gb|EFA24853.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] Length = 266 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 90/172 (52%), Gaps = 20/172 (11%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP--------HIGIVFD-----SFVAIIISLTLNFS 103 + F+V +GTP+LVQL + +YG+P G F+ + + I++ N + Sbjct: 76 LQAFFVSFLKGTPILVQLMLTYYGIPLALKAINQQWGTGFNINAIPAALFAIVAFAFNEA 135 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AY SE IR++I+S+ G+ +A+ ++G+TR Q R +I+P + L + I + K T Sbjct: 136 AYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKGT 195 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 S+A + + E+F AQ + Y+ + +A VY +++ I IES Sbjct: 196 SLAFSAGVVEVFAQAQILGGADYRYFERFISVALVY-------WVVNIGIES 240 >gi|199599084|ref|ZP_03212490.1| ABC-type amino acid transport system, permease component [Lactobacillus rhamnosus HN001] gi|229553194|ref|ZP_04441919.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|258509002|ref|YP_003171753.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG] gi|258540196|ref|YP_003174695.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc 705] gi|199590047|gb|EDY98147.1| ABC-type amino acid transport system, permease component [Lactobacillus rhamnosus HN001] gi|229313490|gb|EEN79463.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|257148929|emb|CAR87902.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus GG] gi|257151872|emb|CAR90844.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus Lc 705] gi|259650295|dbj|BAI42457.1| amino acid ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 214 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 3/181 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIF-FSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 TL + ++ + SLI+G A++ I F + +I YV + R PLLV + +P Sbjct: 19 TLAASILALIGSLIVGTLFALMEISPFKP--LRVIGRIYVEVVRNIPLLVITLAFYVIVP 76 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + D F A I L + SA+I+E +R+ I ++P GQ + + +IG+T Q + II P Sbjct: 77 QFIVKIDGFTAGTIGLLIYTSAFIAETVRAGIEAVPSGQMEGARSIGMTYTQAMTQIIFP 136 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q PL ++FI+++K++SV + + ++ + I +TT+ Y + YLIL Sbjct: 137 QAFKIVIPPLGNQFINLVKNSSVLAFVAGFDLMYQGKLIAATTFSTFDTYLIVGIFYLIL 196 Query: 203 T 203 T Sbjct: 197 T 197 >gi|325697688|gb|EGD39573.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK160] Length = 269 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHI--------GIVFD-----SFVAIIISLTLNFS 103 I F+V RGTPLLVQL + ++G+P + G F+ + V I++ N + Sbjct: 77 IQAFFVSFLRGTPLLVQLMLTYFGIPLLLKAINQKYGTSFNINDIPASVFAIVAFAFNEA 136 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AY SE IR++I+S+ G+ +A+ ++G+T KQ +I+P + L + I + K T Sbjct: 137 AYASETIRAAILSVDPGEIEAARSLGMTNKQVYMRVIIPNAAVVATPSLINSLIGLTKGT 196 Query: 164 SVASTITIPEIFQTAQRIVSTTYQ 187 S+A + + EIF AQ I Y+ Sbjct: 197 SLAFSAGVVEIFAKAQAIAGADYR 220 >gi|206563412|ref|YP_002234175.1| ABC transporter ATP-binding membrane protein [Burkholderia cenocepacia J2315] gi|198039452|emb|CAR55419.1| ABC transporter ATP-binding membrane protein [Burkholderia cenocepacia J2315] Length = 599 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 121/232 (52%), Gaps = 30/232 (12%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EWF S P L + + TL + + V ++G F+A+ R+ S ++S +VW Sbjct: 67 EWFL----SPPVL--SGLARTLVLTLLGAVFGFVLGAFVALARLSRS-RLLSASAWTFVW 119 Query: 64 IFRGTPLLVQLFV----------IFYGLPHIGIV-FDS--------FVAIIISLTLNFSA 104 +FR PL+V L + + G+P IV FD+ F+A ++ LTLN +A Sbjct: 120 LFRSIPLIVLLLILNNLGYLYEHVRLGVPFTDIVWFDTPTTDLISPFLAAVLGLTLNHAA 179 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 + +E+IR I+++ +GQ +A+ A+GL R + I+LPQ + ++ I++ K TS Sbjct: 180 FSAEVIRGGILAVDQGQLEAAAALGLPRGRQTSRIVLPQAMRAILPTAFNDLITLAKGTS 239 Query: 165 VASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 + + +PE+F T Q I + PL++ + YLI+ + IQ+++E Sbjct: 240 MVYVLAMPELFYTVQVIYRRNLEVIPLLMVATV--WYLIILTVLSAIQVQVE 289 >gi|167588450|ref|ZP_02380838.1| histidine transport system permease protein [Burkholderia ubonensis Bu] Length = 237 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 96/182 (52%), Gaps = 13/182 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-----PHI 84 V+S+++GF +AV I S+ +S + Y ++FRGTPL VQL + + G+ H Sbjct: 31 VVSIVLGFLLAVPLAIARASSNRWVSGPVWLYTYVFRGTPLYVQLLMCYTGIYSLQVVHD 90 Query: 85 GIVFDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 ++ D+F +++ LN AY +EI +I + G+ +A A G++R + I Sbjct: 91 NVLLDAFFRDAMNCTLLAFVLNECAYATEIFAGAIKATSAGEIEAGLAYGMSRFKLYTRI 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILP + S S+E I +L +T++A T T+P+I + + + S TY Y A +Y Sbjct: 151 ILPSALRRSLPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYMSFHAYGIAAALY 210 Query: 200 LI 201 + Sbjct: 211 AV 212 >gi|327190179|gb|EGE57284.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 271 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 99/190 (52%), Gaps = 22/190 (11%) Query: 53 IISLIMHFYVWIFRGTPLLVQLF-VIFYGLPHIGIVFDSFVA------------------ 93 ++ I FY+ I RG P+LV LF V F G P + ++ ++ Sbjct: 80 VLRQIARFYIEIIRGIPILVLLFYVAFVGAPGLVAAYNFIISPLVPAGIAEPILVRDLSL 139 Query: 94 ---IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 II+L + +S++I+EI R+ S+ GQ +A+ ++GL+R + R ++ PQ I Sbjct: 140 MWRAIIALMIGYSSFIAEIFRAGFQSVDIGQIEAAKSLGLSRYRRFRLVVFPQAIRVIFP 199 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 PLS++F+S++K +S+ S + + +I Q + S +++ Y + ++YLILT + Sbjct: 200 PLSNDFVSMVKDSSLVSVLGVADITQMGKVYASGSFRFFETYSIVTYIYLILTIGLSLAL 259 Query: 211 IKIESSVTQH 220 +IE + Q Sbjct: 260 RRIERKMKQK 269 >gi|323350322|ref|ZP_08085987.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] gi|322123507|gb|EFX95178.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] gi|327459300|gb|EGF05646.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1] gi|327490517|gb|EGF22298.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1058] gi|332364597|gb|EGJ42366.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1059] Length = 269 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 93/178 (52%), Gaps = 14/178 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + V +++ A+++I ++ I F+V RGTPLLVQL + ++G+P Sbjct: 44 ITLLLTAGGAVFGILLAMVFAIVKIN-RVKVLYPIQAFFVSFLRGTPLLVQLMLTYFGIP 102 Query: 83 HI--------GIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 + G F+ + V I++ N +AY SE IR++I+S+ G+ +A+ ++G Sbjct: 103 LLLKAINQKYGTSFNINEIPASVFAIVAFAFNEAAYASETIRAAILSVDPGEIEAARSLG 162 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +T KQ +I+P + L + I + K TS+A + + EIF AQ I Y+ Sbjct: 163 MTNKQVYMRVIIPNAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYR 220 >gi|293365116|ref|ZP_06611833.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] gi|307702178|ref|ZP_07639138.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus oralis ATCC 35037] gi|291316566|gb|EFE57002.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] gi|307624191|gb|EFO03168.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus oralis ATCC 35037] Length = 266 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 90/172 (52%), Gaps = 20/172 (11%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP----------HIGIVFDSFVAI---IISLTLNFS 103 + F+V +GTP+LVQL + +YG+P G+ ++ A I++ N + Sbjct: 76 LQAFFVSFLKGTPILVQLMLTYYGIPLALKAINQQWGTGLNINAIPAALFAIVAFAFNEA 135 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AY SE IR++I+S+ G+ +A+ ++G+TR Q R +I+P + L + I + K T Sbjct: 136 AYASETIRAAILSVNPGEIEAARSLGMTRVQVYRRVIIPNAAVVATPTLINSLIGLTKGT 195 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 S+A + + E+F AQ + Y+ + +A VY +++ I IES Sbjct: 196 SLAFSAGVVEVFAQAQILGGADYRYFERFISVALVY-------WVVNIGIES 240 >gi|59712141|ref|YP_204917.1| amino-acid transporter permease [Vibrio fischeri ES114] gi|59480242|gb|AAW86029.1| predicted amino-acid transporter permease [Vibrio fischeri ES114] Length = 365 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 6/195 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ +++TL IA + V+SL IG +A+ R II + Y+ I+RG PL+ LF+ Sbjct: 154 LWGGLLITLVIAIVGIVVSLPIGVALALGR-RSEMPIIRSMCTVYIEIWRGVPLITVLFM 212 Query: 77 IFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G+ D +I + L +AY++E++R + +IPKGQ++A+ A+GL Sbjct: 213 ASVMLPLFLSEGMELDKLFRALIGVVLFSAAYMAEVVRGGLQAIPKGQYEAADALGLGYW 272 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + +R IILPQ + + + + FI + K TS+ I + ++ Q +T + L Sbjct: 273 KKMRLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPEWLGFST 331 Query: 194 E-LAFVYLILTSFCY 207 E FV L+ FC+ Sbjct: 332 ESYVFVALVFWVFCF 346 >gi|154245546|ref|YP_001416504.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] gi|154159631|gb|ABS66847.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] Length = 214 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 96/176 (54%), Gaps = 1/176 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ ++ + FV ++G +A+ R S ++ + V + +G PL V +FV+++G+ Sbjct: 19 TIVLSVLGFVGGTLLGLPVALARASKSR-LLRFLSGLLVQLVQGIPLPVIMFVVYFGISI 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 G + VA +++TL AY+ EI + I+++P+ QW+A + LT+ Q +ILPQ Sbjct: 78 AGFDVPALVAAGVAMTLYSGAYLGEIWKGCILAVPRTQWEAGECLALTKTQRFVFVILPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 + + P + I+K+TS + I ++ +A+ I + TY+P ++ A +Y Sbjct: 138 ALRIAVPPTVGFLVQIVKNTSYSVVINFFDLTYSAKVINNATYKPFTVFTIAALIY 193 >gi|315444883|ref|YP_004077762.1| amino acid ABC transporter membrane protein 2, PAAT family [Mycobacterium sp. Spyr1] gi|315263186|gb|ADT99927.1| amino acid ABC transporter membrane protein 2, PAAT family [Mycobacterium sp. Spyr1] Length = 291 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 9/196 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K+E F L D + + I TL A +S V++LI+GF + V R+ + T I + Sbjct: 50 KWEPF-LTGDLWRTYVLPGIEGTLTAAAVSIVLALILGFVLGVGRLS-THTPIRWVSSVL 107 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDS----FVAIIISLTLNFSAYISEIIRSSIISI 117 V FR P+L+ + ++ L VF S +I LTL A I+EI+R+ + ++ Sbjct: 108 VEFFRAVPVLIMMIFAYF-LYAFYDVFPSKYLALAGVITGLTLYNGAVIAEIVRAGVHAL 166 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P+GQ +AS A+GLT QT+R I+LPQ +T+ L S+ + +LK T++ IT E+ + Sbjct: 167 PRGQAEASSALGLTWGQTMRSILLPQAVTSMLPVLISQLVVVLKDTALGYQITFVEMVRQ 226 Query: 178 AQRIVST--TYQPLII 191 I S Y P +I Sbjct: 227 GTVIGSAYGNYIPALI 242 >gi|323525628|ref|YP_004227781.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323382630|gb|ADX54721.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 237 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S I + +AV R+ +S + Y ++FRGTPL VQL +I+ Sbjct: 21 SGLAVTLWLLVASVGIGFCLAIPLAVARVS-KKRWLSTPVRLYTYVFRGTPLYVQLLLIY 79 Query: 79 YGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D+F I++ LN AY +EI +I S G+ +A+ A Sbjct: 80 TGMYSLEFVRSHQLLDAFFRSGFHCAILAFALNTCAYTTEIFAGAIRSTSHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++ R I++P + A+PL S+E I +L +T+VA T T+P+I + A+ S TYQ Sbjct: 140 GMSWFTMYRRIVIPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYQ 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL+++ Sbjct: 199 SFDAFGLAALIYLVVS 214 >gi|300767622|ref|ZP_07077532.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494607|gb|EFK29765.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 496 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 4/173 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + IS +++ I+G + V+ + + I ++IFRG PL+V F I+ G P Sbjct: 299 MTLELTVISIILATILGLILGVLGVM-PGKLGPAISSTIIYIFRGMPLMVLAFFIYIGFP 357 Query: 83 HI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + G +FVA +I+L LN AY ++ ++ GQ +A+ ++GL +R + Sbjct: 358 DLIGHGFKIPAFVAGMITLMLNEGAYTGAFVKGGFAAVDDGQMEAARSLGLPYWTAMRKV 417 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 I+PQ I ++FI LK TS+ S I I E+ QT I++ ++ I+ Sbjct: 418 IMPQGIRIMIPSFINQFIITLKDTSILSVIGIVELTQTGTLIIARNFEGFKIW 470 >gi|218508717|ref|ZP_03506595.1| cystine ABC tranporter, permease protein, putative [Rhizobium etli Brasil 5] Length = 223 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 36/86 (41%), Positives = 59/86 (68%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y +F+ PLL +F+ ++GLP +GI + F A ++SL L ++AY+SEI R++I + + Sbjct: 15 LYTELFKNVPLLAIIFLTYFGLPSVGIRLEVFEAGVLSLVLFYAAYLSEIFRAAIAGVHR 74 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTI 145 GQ +AS A+GL R +T H++LPQ + Sbjct: 75 GQQEASQALGLGRGKTFSHVVLPQAV 100 >gi|322386192|ref|ZP_08059825.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] gi|321269772|gb|EFX52699.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] Length = 230 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/149 (32%), Positives = 89/149 (59%), Gaps = 10/149 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-----IGIVFDSF---VAIIISLTLNFSAYISEIIRS 112 Y++I R TP +V LF++FYG+P +G+ +++ V +II++ L F+A I+E+ ++ Sbjct: 59 YIFILRCTPPIVLLFLVFYGIPEFLKWWLGLDINNWSRTVFVIITMILLFAAMIAEVFKA 118 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +++PKGQ +A +IGLT QT IILPQ + L++ F+++++ ++A TI Sbjct: 119 AYLAVPKGQTEAGLSIGLTPVQTFLRIILPQAFRIALPNLTTAFLNLMRDAALAYTIGAV 178 Query: 173 EIFQTAQRIVSTTYQ--PLIIYCELAFVY 199 ++ Q ++S L Y +A +Y Sbjct: 179 DVMGAGQNLISRNLGNYSLETYTAVALIY 207 >gi|323526380|ref|YP_004228533.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323383382|gb|ADX55473.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 229 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/225 (24%), Positives = 108/225 (48%), Gaps = 17/225 (7%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 PQLL A V T+ ++ +S +++++G AV ++ D I Y + R P LV Sbjct: 8 PQLL-AGAVSTIELSVLSLAVAVVLGLLGAVAKLS-QDRGFRRIASTYTTLIRSVPDLVL 65 Query: 74 LFVIFY-------------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + +IFY G I D F A +++L + AY +E R + +++P+G Sbjct: 66 MLLIFYSIQIAVNDLTDAFGFMQFDI--DPFAAGVLTLGFIYGAYFAETFRGAFLAVPRG 123 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A G+ + R I+ PQ + + + + + ++K+T++ S I + ++ + AQ Sbjct: 124 QLEAGAAYGMNGARIFRRILFPQMMRFALPGIGNNWQVLIKATALVSIIGLADVVKAAQD 183 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +T++ + A +YL +T+ I+ +E + T + Sbjct: 184 AGRSTFKMFLFVMCAALIYLAMTTVSNIVLSGLEKRFSTGTRQAE 228 >gi|319761414|ref|YP_004125351.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC] gi|317115975|gb|ADU98463.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans BC] Length = 250 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 103/188 (54%), Gaps = 3/188 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +A T+ ++ ++ I+L++G I +R + + + +V FR PLLV +F+ Sbjct: 34 LLSAWGWTVSVSLLALAIALVVGSLIGTLRTLPDSPWVVRLGNAWVEFFRNIPLLVHIFL 93 Query: 77 IFYGLPHIGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 ++ +P I S FV ++ +L SA I+E +RS I ++P+GQ A A+G T Sbjct: 94 WYHVIPAIFPAMKSLPGFVLVVFALGFFTSARIAEQVRSGIQALPRGQRYAGMAMGFTTV 153 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q R+++LP PL+SE ++I K++SVA +++ E+ A ++ T + + +Y Sbjct: 154 QYYRYVLLPMAFRIIIPPLTSETMNIFKNSSVAFAVSVSELTMYAMQVQEETSRGIEVYL 213 Query: 194 ELAFVYLI 201 + +Y++ Sbjct: 214 LVTALYVV 221 >gi|227356756|ref|ZP_03841141.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Proteus mirabilis ATCC 29906] gi|227163046|gb|EEI47981.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Proteus mirabilis ATCC 29906] Length = 222 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 119/221 (53%), Gaps = 18/221 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++ I+D P L ++ +T ++F +S+++ F +A+ +IS I+ Y+ +F Sbjct: 2 WDYIVDILPGL-PTSLSLTFVALLVAFTLSVLMTFILAL-----KVPVISPIVKVYITLF 55 Query: 66 RGTPLLVQLFVIFYG------LPHIGIVFD----SFVAIIISLTLNFSAYISEIIRSSII 115 GTPLLVQ F+I+YG L ++++ + +++L LN +AY + + ++ Sbjct: 56 TGTPLLVQFFLIYYGPGQFPSLKEYPLLWELLSTPWFCAMVTLALNSAAYSTLLFHGAVR 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +IP GQW + A+G++ QT ++ILP + S+E + I KSTS+ASTIT+ E+ Sbjct: 116 AIPAGQWQSCQALGMSPLQT-ANVILPYAFKRALSSYSNEVVLIFKSTSLASTITLLELT 174 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 ++++ Y ++++ +YL + ++ IE Sbjct: 175 GYSRQVFGQNYD-VMVFVAAGIIYLAINGILTLLMRLIEKK 214 >gi|53725287|ref|YP_102378.1| arginine/ornithine ABC transporter permease [Burkholderia mallei ATCC 23344] gi|67641785|ref|ZP_00440552.1| histidine transport system permease protein HisM [Burkholderia mallei GB8 horse 4] gi|121598902|ref|YP_993736.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|124383617|ref|YP_001028807.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126439876|ref|YP_001059755.1| histidine transport system permease protein [Burkholderia pseudomallei 668] gi|126449361|ref|YP_001081281.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|167001085|ref|ZP_02266886.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|167825104|ref|ZP_02456575.1| histidine transport system permease protein [Burkholderia pseudomallei 9] gi|167911824|ref|ZP_02498915.1| histidine transport system permease protein [Burkholderia pseudomallei 112] gi|226199895|ref|ZP_03795445.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|254178560|ref|ZP_04885215.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|254199275|ref|ZP_04905641.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia mallei FMH] gi|254205585|ref|ZP_04911937.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia mallei JHU] gi|254296911|ref|ZP_04964364.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 406e] gi|254357748|ref|ZP_04974021.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|52428710|gb|AAU49303.1| arginine/ornithine ABC transporter, permease protein, putative [Burkholderia mallei ATCC 23344] gi|121227712|gb|ABM50230.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|124291637|gb|ABN00906.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126219369|gb|ABN82875.1| histidine transport system permease protein [Burkholderia pseudomallei 668] gi|126242231|gb|ABO05324.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|147748871|gb|EDK55945.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia mallei FMH] gi|147753028|gb|EDK60093.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia mallei JHU] gi|148026875|gb|EDK84896.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|157807735|gb|EDO84905.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 406e] gi|160699599|gb|EDP89569.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|225927951|gb|EEH23988.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|238522771|gb|EEP86213.1| histidine transport system permease protein HisM [Burkholderia mallei GB8 horse 4] gi|243063039|gb|EES45225.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia mallei PRL-20] Length = 237 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S + +AV R+ S +S + FY ++FRGTPL VQL +++ Sbjct: 21 SGLAVTLWLLVASLGAGFVCAVPLAVARVSKSR-WLSTPVRFYTYVFRGTPLYVQLLLLY 79 Query: 79 YGLPHIGIVFD----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V + F I++ LN AY +EI +I +I G+ +A+ A Sbjct: 80 TGMYSLAFVREHAWLDAFFRSGFHCAILAFALNTCAYTTEIFAGAIRAIAHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++ R +ILP ++ A+PL S+E I +L +T+VA T T+P+I + A+ S TY Sbjct: 140 GMSPFTMYRRVILPSSLR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYM 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL ++ Sbjct: 199 AFQSFGIAALIYLAVS 214 >gi|161831065|ref|YP_001596414.1| amino acid ABC transporter, permease protein [Coxiella burnetii RSA 331] gi|161762932|gb|ABX78574.1| amino acid ABC transporter, permease protein [Coxiella burnetii RSA 331] Length = 223 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/173 (32%), Positives = 98/173 (56%), Gaps = 9/173 (5%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEI 109 + +V+I RGTPLLVQ+F+I+YG ++ F II+L +N SAY + + Sbjct: 51 NVFVFIIRGTPLLVQIFIIYYGSGQFHWLRETILWSVLKRPFGCAIIALAINTSAYTTVL 110 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 +R +I SIP G+ +A+ A+GL+R + + II+P+ I S+E I ILK TS+A TI Sbjct: 111 LRGAIRSIPTGEIEAAKALGLSRWKAYQRIIIPRAIRIVLPAYSNEVIMILKGTSLAGTI 170 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 T+ +I + +++ TY+ + ++ +Y +L + + +E +T Y Sbjct: 171 TLMDIMGVTRHLIAMTYEVIPLFFLAGIIYFVLNALIMSVFYFLEKKLTFQYY 223 >gi|330823279|ref|YP_004386582.1| polar amino acid ABC transporter inner membrane subunit [Alicycliphilus denitrificans K601] gi|329308651|gb|AEB83066.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans K601] Length = 250 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 103/188 (54%), Gaps = 3/188 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +A T+ ++ ++ I+L++G I +R + + + +V FR PLLV +F+ Sbjct: 34 LLSAWGWTVSVSLLALAIALVVGSLIGTLRTLPDSPWVVRLGNAWVEFFRNIPLLVHIFL 93 Query: 77 IFYGLPHIGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 ++ +P I S FV ++ +L SA I+E +RS I ++P+GQ A A+G T Sbjct: 94 WYHVIPAIFPAMKSLPGFVLVVFALGFFTSARIAEQVRSGIQALPRGQRYAGMAMGFTTV 153 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q R+++LP PL+SE ++I K++SVA +++ E+ A ++ T + + +Y Sbjct: 154 QYYRYVLLPMAFRIIIPPLTSETMNIFKNSSVAFAVSVSELTMYAMQVQEETSRGIEVYL 213 Query: 194 ELAFVYLI 201 + +Y++ Sbjct: 214 LVTALYVV 221 >gi|270261833|ref|ZP_06190105.1| transporter [Serratia odorifera 4Rx13] gi|270043709|gb|EFA16801.1| transporter [Serratia odorifera 4Rx13] Length = 230 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 45/208 (21%), Positives = 114/208 (54%), Gaps = 13/208 (6%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 ++I+ P L + A ++L + +S ++L +G A+I++F + + Y + RG Sbjct: 1 MVIEYLPLLAHGA-ALSLCVMLVSLAVALALGLINALIKLF-GPRWLRWLSTGYTTLVRG 58 Query: 68 TPLLVQLFVIFYGLPHIGIV-----------FDSFVAIIISLTLNFSAYISEIIRSSIIS 116 P LV + ++F+G + F++F++ ++++ F AY +E R + ++ Sbjct: 59 IPELVIMLLLFFGGEMLVNGFLGLLGLGPLRFNTFISGVLAIGFVFGAYYTETFRGAFLT 118 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + +GQ +A+ A G+ Q R ++LPQ ++ + +++ ++ ++K++++ S + + ++ Sbjct: 119 VERGQLEAAMAYGMRPGQVFRRVLLPQMLSFAIPGINNNWLGLMKASALVSILGLEDMVW 178 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTS 204 A++ T +P + Y +A +Y+++T+ Sbjct: 179 LAEQAGRATQKPFLFYFLVALIYMVITA 206 >gi|212218910|ref|YP_002305697.1| arginine transport system permease protein [Coxiella burnetii CbuK_Q154] gi|212013172|gb|ACJ20552.1| arginine transport system permease protein [Coxiella burnetii CbuK_Q154] Length = 173 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/172 (32%), Positives = 97/172 (56%), Gaps = 9/172 (5%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEII 110 F+ +I RGTPLLVQ+F+I+YG ++ F +I+L +N SAY + ++ Sbjct: 2 FFFFIIRGTPLLVQIFIIYYGSGQFHWLRETILWSVLKRPFGCAVIALAINTSAYTTVLL 61 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R +I SIP G+ +A+ A+GL+R + + II+P+ I S+E I ILK TS+A TIT Sbjct: 62 RGAIRSIPTGEIEAAKALGLSRWKAYQRIIIPRAIRIVLPAYSNEVIMILKGTSLAGTIT 121 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 + +I + +++ TY+ + ++ +Y +L + + +E +T Y Sbjct: 122 LMDIMGVTRHLIAMTYEVIPLFFLAGIIYFVLNALIMSVFYFLEKKLTFQYY 173 >gi|218678152|ref|ZP_03526049.1| nopaline ABC transporter, permease protein [Rhizobium etli CIAT 894] Length = 163 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/145 (33%), Positives = 83/145 (57%), Gaps = 14/145 (9%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + P+ L +V+T F +S+ + F A + S +++ Y + FRGTPLL Sbjct: 12 TLPRGLLLTLVLTFASLAAGFAVSVPLAFLRASSNPWASAPVLA-----YTYAFRGTPLL 66 Query: 72 VQLFVIFYGLPHIGIVFDSFVAII---------ISLTLNFSAYISEIIRSSIISIPKGQW 122 VQLF+I+YG+ + +V SF+ + I+ TLN +A+ +E++R I ++P+GQ Sbjct: 67 VQLFLIYYGIGQLPLVRQSFLWAVMREPFWCAFIAFTLNSAAHTTEVLRGGIQAVPRGQI 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITT 147 +A+ A+GL+R T R I+ P T+ + Sbjct: 127 EAAKALGLSRFHTARLIVFPLTLRS 151 >gi|197335791|ref|YP_002156347.1| general L-amino acid transport system permease protein AapM [Vibrio fischeri MJ11] gi|197317281|gb|ACH66728.1| general L-amino acid transport system permease protein AapM [Vibrio fischeri MJ11] Length = 365 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 6/195 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ +++TL IA + V+SL IG +A+ R II + Y+ I+RG PL+ LF+ Sbjct: 154 LWGGLLITLVIAIVGIVVSLPIGVALALGR-RSEMPIIRSMCTVYIEIWRGVPLITVLFM 212 Query: 77 IFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G+ D +I + L +AY++E++R + +IPKGQ++A+ A+GL Sbjct: 213 ASVMLPLFLSEGMELDKLFRALIGVVLFSAAYMAEVVRGGLQAIPKGQYEAADALGLGYW 272 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + +R IILPQ + + + + FI + K TS+ I + ++ Q +T + L Sbjct: 273 KKMRLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPEWLGFST 331 Query: 194 E-LAFVYLILTSFCY 207 E FV L+ FC+ Sbjct: 332 ESYVFVALVFWVFCF 346 >gi|32266982|ref|NP_861014.1| putative ABC-type amino-acid transporter permease protein [Helicobacter hepaticus ATCC 51449] gi|32263034|gb|AAP78080.1| putative ABC-type amino-acid transporter permease protein [Helicobacter hepaticus ATCC 51449] Length = 219 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 11/190 (5%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+ S L + +TL +A + VIS+I G F+A+ R + IIS + Y+ +FR Sbjct: 3 NVFNQSNLHFLLDGLYLTLVVALATCVISIIFGTFLAITRNY-GGRIISSLAAIYIEVFR 61 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 TPLL+ + + LP + + I +L S+ ++EIIR + S+PKGQ++A+Y Sbjct: 62 NTPLLLWMLTAVFVLPSFFGRAEPAIWGTIGFSLYTSSVMAEIIRGGLNSVPKGQFEAAY 121 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 + G ++ T+ +IILPQT + S+ I+ K TS + + I E+ TY Sbjct: 122 SQGFSQFFTLFYIILPQTFRKVIPSMLSQIITTFKDTSFLAGLQIAEL----------TY 171 Query: 187 QPLIIYCELA 196 Q II +LA Sbjct: 172 QSKIILAQLA 181 >gi|87309629|ref|ZP_01091763.1| amino acid ABC transporter, permease protein [Blastopirellula marina DSM 3645] gi|87287393|gb|EAQ79293.1| amino acid ABC transporter, permease protein [Blastopirellula marina DSM 3645] Length = 219 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 104/201 (51%), Gaps = 23/201 (11%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++W I P++L V L +A +++++G AV+R +H+ Sbjct: 2 WDW-EFAIRILPEILEGLGVTLLAVAG-GMTLAILLGLAWAVMR--------RSTLHWVS 51 Query: 63 W-------IFRGTPLLVQLFVIFYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 W R TPLLVQL++++Y L + G + + I + L L++S Y +E+ R+ Sbjct: 52 WPTYGIVEFIRSTPLLVQLYLVYYTLAELTSGWLSPLWSGIFV-LGLHYSCYTAEVYRAG 110 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + +P+GQW A+ A+ LT QT RH++LPQ I L + I++ K + S IT+ + Sbjct: 111 LNGVPQGQWIAAKALNLTTWQTYRHVVLPQAIPPILPALGNYLIAMFKDAPLLSAITVLD 170 Query: 174 IFQTAQRIVSTTY---QPLII 191 + Q A+ + + ++ +PL I Sbjct: 171 VLQRAKIVGNQSFRYQEPLTI 191 >gi|328881414|emb|CCA54653.1| ABC-type polar amino acid transport system,ATPase component [Streptomyces venezuelae ATCC 10712] Length = 294 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/222 (27%), Positives = 110/222 (49%), Gaps = 23/222 (10%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF- 78 A+ VTL + + IG +A +R+ S + S+ Y+W FR PL+VQL F Sbjct: 74 AVWVTLQLTFYGTALGFAIGIVLAFMRLSASPFLRSVAFG-YIWAFRSIPLIVQLLFWFN 132 Query: 79 ----YGLPHIGIVFD-------------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 Y IGI F A ++ L L+ +AY +EI+R ++++ +GQ Sbjct: 133 LAYLYKELSIGIPFGPGFLSFDTTGLVGEMSAAVLGLALHQAAYAAEIVRGGVLAVDEGQ 192 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++G+ R + +R I+LPQ + + ++E IS+ K TS+ S + I E+F Q + Sbjct: 193 AEAAASLGIPRLRQLRRIVLPQAMRSILPNAANEIISLFKGTSIVSVMAIGELFYQVQVV 252 Query: 182 VSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + PL++ Y++LT+ ++Q +E + + Sbjct: 253 YGRNGRVVPLLMVATA--WYVLLTTALSVVQHYVERHYAKGS 292 >gi|313115584|ref|ZP_07801043.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310622099|gb|EFQ05595.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 224 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/171 (30%), Positives = 100/171 (58%), Gaps = 4/171 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + V L I+ +S +ISL +G + V+ + + +I ++ Y+ R P +V LF+ Sbjct: 18 LLGGLGVALKISAVSVIISLPLGILLGVL-MTSRNPVIKAVLRLYLEFVRIMPQMVLLFL 76 Query: 77 IFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +++G G A II L +A +S+++R ++I+IPK Q++++ A+G++R QT Sbjct: 77 VYFGTTRAFGWNLSGETASIIVFVLWGTAEMSDLVRGALIAIPKHQYESAEALGMSRAQT 136 Query: 136 IRHIILPQTITTSAVPLSSEFIS-ILKSTSVASTITIPEIFQTAQRIVSTT 185 +II+PQT+ +PLS I+ ++K+TS+ I + E+ + AQ+I+ Sbjct: 137 YWYIIIPQTV-RRLIPLSINLITRMIKTTSLVLMIGVVEVIKVAQQIIEAN 186 >gi|306829073|ref|ZP_07462263.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] gi|304428159|gb|EFM31249.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] Length = 225 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/156 (32%), Positives = 89/156 (57%), Gaps = 4/156 (2%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++ +G V+ I+ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAMALGIIFGVLSTS-KHQILRILARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLPHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 FYGLP I I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISEHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYIS 136 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R IILPQ PL+++ ++++K+TS + I+ Sbjct: 137 AMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|317402648|gb|EFV83206.1| amino acids ABC transporter [Achromobacter xylosoxidans C54] Length = 238 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 109/205 (53%), Gaps = 3/205 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 +K W L+I +P + TL +A +S ++L G +A+ RI + Sbjct: 5 LKDNWLLLLIGQYPHGPIGGLAATLGLAAVSLALALPCGVLLALGRIS-PYRALRWPASA 63 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 V++ R PLL+ +F ++ +P I G ++++L SAY++EIIR+ I ++P Sbjct: 64 MVYLVRSLPLLMFIFWAYFFVPLIIGRPVAGTTTMVVALVCYESAYLAEIIRAGIQALPP 123 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A A+GL+ QT+R +ILPQ + + S+F+S +K TS+A I++ E+ A Sbjct: 124 GQQEAGRALGLSYMQTMRRVILPQALYNMLPSMLSQFVSTVKETSLAYVISVQELTYAAN 183 Query: 180 RIVSTTY-QPLIIYCELAFVYLILT 203 +I S +P ++ LA Y IL Sbjct: 184 QINSVLLTKPFEVFALLALTYFILN 208 >gi|317182423|dbj|BAJ60207.1| glutamine ABC transporter, permease protein [Helicobacter pylori F57] Length = 217 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 101/187 (54%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + ++ S P L + +TL I+ ++SL++GF A+I ++F IS I++ Sbjct: 1 MALDW-DFMLHSIPMFL-KGLELTLYISFFGILLSLLVGFLCAII-LYFKTRFISPIVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QKESALSLGFGPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQ 187 + Y+ Sbjct: 176 FIGIYYK 182 >gi|229588841|ref|YP_002870960.1| histidine ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229360707|emb|CAY47565.1| histidine ABC transport system, permease protein [Pseudomonas fluorescens SBW25] Length = 236 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 96/182 (52%), Gaps = 13/182 (7%) Query: 35 SLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF--- 88 +L+IGF +++ I + ++ + FY ++FRGTPL +QL + + G+ I V Sbjct: 33 ALVIGFVVSIPLSIARVSRNPLVRWPVQFYTYLFRGTPLYIQLLICYTGIYSIAAVRAQP 92 Query: 89 -------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 D+ I++ LN AY +EI SI S+ G+ +A+ A GL+ + ++I+ Sbjct: 93 VLDAFFRDAMNCTILTFALNTCAYTTEIFAGSIRSMAHGEVEAAKAYGLSGWKLYAYVIM 152 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 P + S S+E I +L ST+VA T TIP+I + A+ S T+ + A +YL Sbjct: 153 PSALRRSLPYYSNEVILMLHSTTVAFTATIPDILKVARDANSATFMTFQSFGIAALIYLT 212 Query: 202 LT 203 +T Sbjct: 213 VT 214 >gi|327467233|gb|EGF12737.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK330] gi|328945052|gb|EGG39208.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1087] Length = 270 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 93/178 (52%), Gaps = 14/178 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + V +++ A+++I ++ I F+V RGTPLLVQL + ++G+P Sbjct: 45 ITLLLTAGGAVFGILLAMVFAIVKIN-RVKVLYPIQAFFVSFLRGTPLLVQLMLTYFGIP 103 Query: 83 HI--------GIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 + G F+ + V I++ N +AY SE IR++I+S+ G+ +A+ ++G Sbjct: 104 LLLKAINQKYGTSFNINEIPASVFAIVAFAFNEAAYASETIRAAILSVDPGEIEAARSLG 163 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +T KQ +I+P + L + I + K TS+A + + EIF AQ I Y+ Sbjct: 164 MTNKQVYMRVIIPNAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYR 221 >gi|269796951|ref|YP_003316406.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii DSM 10542] gi|269099136|gb|ACZ23572.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii DSM 10542] Length = 216 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 114/212 (53%), Gaps = 6/212 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D P++ + +TL +A +S +SL+ G +A R+ ++ + YV + R T Sbjct: 4 LVDELPRI-WQGFQLTLFLAVVSGALSLVFGTILAAFRVAPLRSLRTF-AGAYVEVARNT 61 Query: 69 PL-LVQLFVIFYGLPHIGIVFD-SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PL LV +F +F LP +G + V II+LT SA++ E +RS I S+ GQ +A+ Sbjct: 62 PLTLVFIFFVFV-LPSLGFILPLGRVPAIIALTAYTSAFVCEAVRSGINSVAVGQAEAAR 120 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 AIGL QT+ ++LPQ + T PL + I++ K+TSVA+ + E+ T++ + Sbjct: 121 AIGLGTVQTLSLVVLPQALRTVVPPLINVLIALTKNTSVAAGFAVVELTSTSRALARDNP 180 Query: 187 QPLI-IYCELAFVYLILTSFCYIIQIKIESSV 217 ++ + +A YL++T I IE V Sbjct: 181 ADVVLLLTGIAVCYLVITIPAGIAANAIERKV 212 >gi|125718886|ref|YP_001036019.1| arginine/histidine ABC transporter permease [Streptococcus sanguinis SK36] gi|125498803|gb|ABN45469.1| ABC-type arginine/histidine transporter, permease protein, putative [Streptococcus sanguinis SK36] gi|325688945|gb|EGD30953.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK115] Length = 230 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/149 (32%), Positives = 89/149 (59%), Gaps = 10/149 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-----IGIVFDSF---VAIIISLTLNFSAYISEIIRS 112 Y++I R TP +V LF++FYG+P +G+ +++ V +II++ L F+A I+E+ ++ Sbjct: 59 YIFILRCTPPIVLLFLVFYGIPEFLEWWLGLDINNWSRTVFVIITMILLFAAMIAEVFKA 118 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +++PKGQ +A +IGLT QT IILPQ + L++ F+++++ ++A TI Sbjct: 119 AYLAVPKGQTEAGLSIGLTPVQTFLRIILPQAFRIALPNLTTSFLNLMRDAALAYTIGAV 178 Query: 173 EIFQTAQRIVSTTYQ--PLIIYCELAFVY 199 ++ Q ++S L Y +A +Y Sbjct: 179 DVMGAGQNLISRNLGNYSLETYTAVALIY 207 >gi|56962685|ref|YP_174411.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16] gi|56908923|dbj|BAD63450.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16] Length = 223 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/163 (31%), Positives = 91/163 (55%), Gaps = 6/163 (3%) Query: 21 IVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWIFRGTPLLVQLFVI 77 I+ L I F++ ++ + IA++ + +I + +V +FRGT LLVQ+F Sbjct: 12 ILKGLEITVQVFLVGAVVAYSIALVAGLMRTSKNPVIRSVAAVFVELFRGTSLLVQMFFF 71 Query: 78 FYGLPHI--GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 Y LP I G+ +F+A I++ LN+ AY SE++R +I SI GQ +A+ ++ +++ Q Sbjct: 72 VYALPMIFPGLSMSNFLAGSIAVGLNYGAYASEVVRGAIHSIAVGQTEAAISLNMSKWQR 131 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQT 177 +R +ILPQ + + I +LK TS+ I + ++ FQ Sbjct: 132 MRLVILPQAVRLMLPGFGNNAIELLKGTSLVYFIALADMTFQA 174 >gi|330897282|gb|EGH28701.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] gi|330939545|gb|EGH42868.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] gi|330981783|gb|EGH79886.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 229 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 13/215 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 +TL +A S +++++G +R+ I+ + Y + RG P LV + +IFYG Sbjct: 15 LTLQLALSSMALAIVLGLIGVALRLS-PVRWIAWLGDLYSTVVRGIPDLVLILLIFYGGQ 73 Query: 81 ------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P +G I D +A I +L F AY+SE R + ++IPKGQ +A A GL Sbjct: 74 DLLNRVAPLLGFDDYIDLDPLMAGICTLGFIFGAYLSETFRGAFMAIPKGQAEAGMAYGL 133 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + + I++PQ I + ++ ++ + K+T++ S + + ++ A++ T +P Sbjct: 134 SSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATREPFT 193 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + +A +YL++TS + +E + + D Sbjct: 194 FFLAVAAMYLVITSVSLLALRYLEKRYSVGVRAAD 228 >gi|323466208|gb|ADX69895.1| ABC-type amino acid transport system, permease component [Lactobacillus helveticus H10] Length = 210 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 73/140 (52%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 +F I+S I YV + R TPLL+QLF ++Y LP IG S A II L Y++ Sbjct: 34 YFKTPILSQIATAYVELARNTPLLIQLFFLYYALPVIGWRMSSVTAGIIGLIFLGGGYMA 93 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E + Q ++ A+G+ R Q R+++ PQ S L++ I ++K TS+ + Sbjct: 94 EGFTGGFQGVTDSQINSGEALGMNRFQLARYVVFPQGFALSMPALAANVIFLIKETSIFT 153 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I IPE+ TA ++ Y+ Sbjct: 154 VIAIPELTNTALDLIGMYYR 173 >gi|319948858|ref|ZP_08022971.1| putative ABC transporter permease protein [Dietzia cinnamea P4] gi|319437460|gb|EFV92467.1| putative ABC transporter permease protein [Dietzia cinnamea P4] Length = 214 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 115/223 (51%), Gaps = 15/223 (6%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M +W + ++ P LL +TL + F+I+ +G +AV+R + +I++ + Sbjct: 1 MSVDWSWERAAEAVPVLL-EGFRITLLATVVGFLIAAALGLVVAVLR-RAAPAVITVPLR 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 R TPL+VQL ++ LP F + I + ++++ Y++E+ R+ I ++P+ Sbjct: 59 MVTEFIRLTPLVVQLLFAYFLLPQ----FTALQIGIGVIGVHYATYMAEVYRAGIDAVPR 114 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A+ A+ L +T R ++LPQ I + L + IS+ K T IT+ E+ AQ Sbjct: 115 GQWEAAQALSLPAGRTWRAVVLPQAIRNTVPALGNYAISLFKDTPFLFAITVVEMVTAAQ 174 Query: 180 RIVSTTYQPLIIYCE---LAFVYLILTSFCYIIQI-KIESSVT 218 + + +Q Y E LA V +L S+ I I ++E S+ Sbjct: 175 QYGARNFQ----YLEPITLAGVIFLLASYPTSILIRRLEKSLA 213 >gi|299066138|emb|CBJ37321.1| putative amino acid transmembrane abc transporter protein [Ralstonia solanacearum CMR15] Length = 232 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 96/165 (58%), Gaps = 7/165 (4%) Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V++ RGTPLL+ +F ++ LP + G D F ++ +L + +AY++EI+R+ I ++P+G Sbjct: 67 VYVVRGTPLLMVIFWAYFLLPTLTGQRTDQFNTMLTALVVFDAAYLAEIVRAGIQALPRG 126 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQ 179 Q +++ ++GL Q +R +ILPQ + L ++ +S +K TS+ I++PE+ F Q Sbjct: 127 QMESARSLGLPYLQAMRLVILPQALRNMLPSLVNQLVSTIKETSLGYIISLPEVSFVAGQ 186 Query: 180 RIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIES-SVTQ 219 S Q +Y LA Y LT Y+++ ++ + ++TQ Sbjct: 187 ISTSVMTQSAEVYGLLALSYFAMCFGLTRVAYLLERRLAARALTQ 231 >gi|300722505|ref|YP_003711795.1| arginine ABC transporter membrane protein [Xenorhabdus nematophila ATCC 19061] gi|297629012|emb|CBJ89597.1| arginine transport protein (ABC superfamily, membrane) [Xenorhabdus nematophila ATCC 19061] Length = 222 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 97/172 (56%), Gaps = 12/172 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNF 102 ++S ++ Y+ +F GTPLLVQ F+I+YG P I ++ + ++ +++L LN Sbjct: 43 VVSQLVKGYITLFTGTPLLVQFFLIYYGPGQFPSIKEYPWLWQLISEPWLCAMVTLALNS 102 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +++ ++ +IP GQW + A+G+++ ++R I+LP + S+E I I KS Sbjct: 103 AAYSTQLFYGAVKAIPAGQWQSCQALGMSKIHSMR-ILLPYAFKRALSSYSNEVILIFKS 161 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+ASTIT+ +I +Q +Y + ++ +YL + ++ +E Sbjct: 162 TSLASTITLLDIMGYSQLQFGRSYD-VTVFVAAGIIYLCINGLLTLLMRMLE 212 >gi|91780197|ref|YP_555404.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91692857|gb|ABE36054.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia xenovorans LB400] Length = 231 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 84/145 (57%), Gaps = 6/145 (4%) Query: 62 VWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 V +FR P+L+ +F F+ +P H+ + ++ +L L AY+S +++ I+++ Sbjct: 66 VGLFRAIPVLMLIFWTFFLMPVLLHVDV--PGLATVVCALALIGGAYLSHSVQAGIVAVG 123 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQW A+ ++G+TR Q +RH++LPQ I T ++++S++K TS+A + +PE A Sbjct: 124 DGQWQAAQSLGMTRGQALRHVLLPQAIRTMTPSFVNQWVSLIKDTSLAYIVGVPEFTFLA 183 Query: 179 QRIVST-TYQPLIIYCELAFVYLIL 202 ++ S P I+ + VYL+L Sbjct: 184 NQVNSRLMVYPAQIFLFVGLVYLVL 208 >gi|322377819|ref|ZP_08052308.1| amino acid ABC transporter, permease protein [Streptococcus sp. M334] gi|321281242|gb|EFX58253.1| amino acid ABC transporter, permease protein [Streptococcus sp. M334] Length = 225 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 90/157 (57%), Gaps = 6/157 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++++G + I+ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAMVLGILFGAMSTS-KRPILRILARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLP----HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 FYGLP HI I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHI-IMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYI 135 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R IILPQ PL+++ ++++K+TS + I+ Sbjct: 136 SAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|218511055|ref|ZP_03508933.1| putative permease component of ABC transporter [Rhizobium etli Brasil 5] Length = 224 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/164 (32%), Positives = 94/164 (57%), Gaps = 2/164 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++ +P ++ IV+TL + + V+ + +G F A +R + ++ YV + Sbjct: 7 FGWLLQYYPDII-KGIVITLELIAVGGVLGISLGIFCAWVRAL-GPAWLKPVVAAYVELI 64 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP L+QLF IF+GLP IG+ A +++ +N AY EIIR+ I + PKGQ++A Sbjct: 65 RNTPFLIQLFFIFFGLPSIGLHLSELTAANLAMVVNLGAYSCEIIRAGIQATPKGQFEAG 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 ++ +TR +T RH++L ++ LSS+ + ++ +SV S I Sbjct: 125 ESLAMTRFETFRHVVLVPSLQRIWPALSSQVVIVMLGSSVGSQI 168 >gi|329297449|ref|ZP_08254785.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ [Plautia stali symbiont] Length = 213 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 107/207 (51%), Gaps = 14/207 (6%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + +++ +VTL +A S V+++++ A ++ + ++++I Y + R P L Sbjct: 4 GYSEIILKGTLVTLELALSSVVLAVVLSLIGAGAKLS-RNRLLAMIFEGYTRLIRSVPDL 62 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G+ D VA II+L + AY +E R + +++PKG Sbjct: 63 VLMLLIFYGLQIALNAVTDALGMAQFDIDPMVAGIITLGFIYGAYFTETFRGAFLAVPKG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVP-LSSEFISILKSTSVASTITIPEIFQTAQ 179 Q +A+ A G T QT R I+ Q + A+P + + + ILK+T++ S + + ++ + Q Sbjct: 123 QIEAATAFGFTGSQTFRRILF-QAMMRFALPGIGNNWQVILKATALVSLLGLEDVVKATQ 181 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFC 206 +T+QP +YL+ T+ Sbjct: 182 LAGKSTWQPFYFAIVAGVIYLVFTTLS 208 >gi|331697742|ref|YP_004333981.1| polar amino acid ABC transporter inner membrane subunit [Pseudonocardia dioxanivorans CB1190] gi|326952431|gb|AEA26128.1| polar amino acid ABC transporter, inner membrane subunit [Pseudonocardia dioxanivorans CB1190] Length = 215 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 111/209 (53%), Gaps = 3/209 (1%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+++D+ L A + T+ + ++ V SL++G +A +R+ I+ YV + R Sbjct: 2 NVLLDNL-DLYGRAFLGTIELFLVAAVGSLVLGAIVAAMRVS-PVPILRTFGMLYVNLIR 59 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSF-VAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 TPL + LF + P + IV SF I L L +A++ E++RS I ++P GQ +AS Sbjct: 60 NTPLTLVLFFFAFAYPRLEIVDLSFFTRACIGLILYTAAFVCEVLRSGINTVPVGQAEAS 119 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G QT+ I++PQ + PL++ I++LK+T++AS ++ + Q + Sbjct: 120 RALGFGFNQTLTTIVMPQAVRAVVPPLTNVQIALLKNTTIASGFSVFQAGGIYQELSENG 179 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Y L+ +A +LIL ++Q ++ Sbjct: 180 YNVLVGLLWIALGFLILVVPLTLLQRNLD 208 >gi|149191456|ref|ZP_01869706.1| arginine transporter permease subunit ArtQ [Vibrio shilonii AK1] gi|148834725|gb|EDL51712.1| arginine transporter permease subunit ArtQ [Vibrio shilonii AK1] Length = 230 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 104/188 (55%), Gaps = 8/188 (4%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ +A +S ++ L++ A + IIS V I RG P L+ + IF+G Sbjct: 16 VTIQLAFVSLLVGLVLAIIFAGGEMS-RHKIISWPTTAIVTIIRGLPELLVVLFIFFGST 74 Query: 83 HI-----G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 + G I F+A +I+L+L F++Y ++ IR ++ ++P GQ +A A+GL+R + Sbjct: 75 QVLFLITGDFIEVSPFLAGVIALSLIFASYAAQTIRGALKAVPSGQREAGSALGLSRARV 134 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 I+LPQ + + L+++++ +LK T++ S I + ++ + AQ + T++ Y Sbjct: 135 FFRIVLPQAVKHALPGLTNQWLVLLKDTALVSLIGVTDLMKQAQLTSAATHEAFTWYATA 194 Query: 196 AFVYLILT 203 A +YLI+T Sbjct: 195 AAIYLIIT 202 >gi|113868713|ref|YP_727202.1| ABC transporter permease [Ralstonia eutropha H16] gi|113527489|emb|CAJ93834.1| ABC-type transporter, permease component: PAAT family [Ralstonia eutropha H16] Length = 216 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 111/211 (52%), Gaps = 7/211 (3%) Query: 12 SFPQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 SF Q+L+ TL +A + F ++G +A+ R ++ + YV + +G P Sbjct: 5 SFDQVLFILRGAGWTLLLAGMGFAGGALVGVPLALARSR-GGRVLRTLTGAYVQLVQGVP 63 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 L V +FV+++G+ G + VA I++T SAY+ EI + I ++P+ QW+A+ + Sbjct: 64 LPVIMFVVYFGISVGGFELPALVAAGIAMTAYSSAYLGEIWKGCIQAVPRTQWEAAECLA 123 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 LT Q ++ILPQ + P S + I+K++S A I ++ +A+ + ++T++P Sbjct: 124 LTPLQRAVYVILPQAARIAIAPTVSFLVQIVKNSSYAVVIGFFDLTYSARVVNNSTFKPF 183 Query: 190 IIYCELAFVYLI----LTSFCYIIQIKIESS 216 +++ A +Y L+S Y ++ + + Sbjct: 184 LVFTIAAALYFAICYPLSSLSYRLERRFNKA 214 >gi|270264106|ref|ZP_06192373.1| transporter [Serratia odorifera 4Rx13] gi|270041755|gb|EFA14852.1| transporter [Serratia odorifera 4Rx13] Length = 246 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/215 (25%), Positives = 115/215 (53%), Gaps = 7/215 (3%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ ++P +TL I+ ++ V S ++G + V + S + + ++ + FR Sbjct: 13 LLWGTWPDGPLGGAALTLAISLMAGVASAVLGTLLGVA-LAMSRGVAAGLLAAVLGFFRA 71 Query: 68 TPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P+++ +F ++ LP + G+ ++ +L L SAY++ +++ I++I GQW A Sbjct: 72 IPVIMLIFWTYFLLPILFGVDIPEITTVVCALALIASAYLAHAVKAGIVAIGPGQWQAGL 131 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVSTT 185 ++GLTR QT+R I+LPQ + +++IS++K TS+A + + E+ F Q + Sbjct: 132 SLGLTRWQTLRMIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVSELTFLATQVNNRSM 191 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 P+ ++ +A VY + FC + + + ++V + Sbjct: 192 VYPMEVFLFVALVYFV---FCLALDL-LANAVNRR 222 >gi|241666825|ref|YP_002984909.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862282|gb|ACS59947.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 241 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 109/206 (52%), Gaps = 13/206 (6%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + LL AA ++TL + + I ++G +A ++ + +++L + Y +FRG P L Sbjct: 13 GWGALLIAAALMTLAVTATALAIGAVLGAIVAAAKLSGNLVLVTL-GNVYTTVFRGVPEL 71 Query: 72 VQLFVIFYG----LPHIGIVFD--------SFVAIIISLTLNFSAYISEIIRSSIISIPK 119 + +++I++G + IG SF+A +++ + AY +E+ RS+ ++I K Sbjct: 72 LIIYLIYFGGSSAVTSIGQAMGYEGFLGLPSFIAGALAVGIISGAYQAEVFRSAFLAISK 131 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G+ +A+ AIG+ R +R II+PQ + L + + LK +++ S + E+ +T+Q Sbjct: 132 GELEAASAIGMHRGMRLRRIIMPQVFRLAIPGLGNVWQLSLKDSALISVTGLAELMRTSQ 191 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSF 205 +T Q + + +YL+LTS Sbjct: 192 VAAGSTRQYFLFFIAGGCLYLLLTSL 217 >gi|66046799|ref|YP_236640.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63257506|gb|AAY38602.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] gi|330953616|gb|EGH53876.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] gi|330972268|gb|EGH72334.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 229 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 13/215 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 +TL +A S +++++G +R+ I+ + Y + RG P LV + +IFYG Sbjct: 15 LTLQLALSSMALAIVLGLIGVALRLS-PVRWIAWLGDLYSTVIRGIPDLVLILLIFYGGQ 73 Query: 81 ------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P +G I D +A I +L F AY+SE R + ++IPKGQ +A A GL Sbjct: 74 DLLNRVAPLLGFDDYIDLDPLMAGICTLGFIFGAYLSETFRGAFMAIPKGQAEAGMAYGL 133 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + + I++PQ I + ++ ++ + K+T++ S + + ++ A++ T +P Sbjct: 134 SSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATREPFT 193 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + +A +YL++TS + +E + + D Sbjct: 194 FFLAVAAMYLVITSVSLLALRYLEKRYSVGVRAAD 228 >gi|237799096|ref|ZP_04587557.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021950|gb|EGI02007.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 229 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 13/215 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 +TL +A S +++++G +R+ I+ + Y + RG P LV + +IFYG Sbjct: 15 LTLQLALSSMALAIVLGLIGVALRLS-PVRWIAWLGDLYSTVIRGIPDLVLILLIFYGGQ 73 Query: 81 ------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P +G I D +A I +L F AY+SE R + ++IPKGQ +A A GL Sbjct: 74 DLLNRVAPLLGFDDYIDLDPLLAGICTLGFIFGAYLSETFRGAFMAIPKGQAEAGMAYGL 133 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + + I++PQ I + ++ ++ + K+T++ S + + ++ A++ T +P Sbjct: 134 SSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATREPFT 193 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + +A +YL++TS + +E + + D Sbjct: 194 FFLAVAAMYLVITSVSLLALRYLEKRYSVGVKAAD 228 >gi|89899770|ref|YP_522241.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89344507|gb|ABD68710.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 220 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 72/127 (56%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TPLLV + ++ LP +G+ + + +L + Y++E+ R+ ++S+PKG Sbjct: 60 YVTVTRNTPLLVLVLFTYFALPDLGVRLGDIESFVATLAIYSGGYLAEVFRAGMLSVPKG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 +A AIGLTR Q II+P L S IS+ K TS+A+ I +PE+ A++ Sbjct: 120 LSEAGQAIGLTRMQIRFSIIMPIMFRNVLPALGSTVISLFKDTSLAAAIAVPELTYQARK 179 Query: 181 IVSTTYQ 187 I +++ Sbjct: 180 INVESFR 186 >gi|28377653|ref|NP_784545.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum WCFS1] gi|254555834|ref|YP_003062251.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum JDM1] gi|308179813|ref|YP_003923941.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28270486|emb|CAD63388.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum WCFS1] gi|254044761|gb|ACT61554.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum JDM1] gi|308045304|gb|ADN97847.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 478 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 4/173 (2%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + IS +++ I+G + V+ + + I ++IFRG PL+V F I+ G P Sbjct: 281 MTLELTVISIILATILGLILGVLGVM-PGKLGPAISSTIIYIFRGMPLMVLAFFIYIGFP 339 Query: 83 HI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + G +FVA +I+L LN AY ++ ++ GQ +A+ ++GL +R + Sbjct: 340 DLIGHGFKIPAFVAGMITLMLNEGAYTGAFVKGGFAAVDDGQMEAARSLGLPYWTAMRKV 399 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 I+PQ I ++FI LK TS+ S I I E+ QT I++ ++ I+ Sbjct: 400 IMPQGIRIMIPSFINQFIITLKDTSILSVIGIVELTQTGTLIIARNFEGFKIW 452 >gi|319940984|ref|ZP_08015321.1| hypothetical protein HMPREF9464_00540 [Sutterella wadsworthensis 3_1_45B] gi|319805557|gb|EFW02352.1| hypothetical protein HMPREF9464_00540 [Sutterella wadsworthensis 3_1_45B] Length = 252 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 88/161 (54%), Gaps = 18/161 (11%) Query: 61 YVWIFRGTPLLVQLFVIFYGL------PHIGIV------------FDSFVAIIISLTLNF 102 YV FRGTPL VQ+F++++ + P G++ + + +A + ++TLN Sbjct: 69 YVSFFRGTPLFVQIFLMYFAVLPVFIHPVDGLLISGQLARDIRSNYGAMLAGVCAITLNS 128 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AY+ EI R+ I S+ KGQ +A+ ++G++ Q +R IILPQ L + I+ILK Sbjct: 129 GAYMCEIFRAGIQSLDKGQMEAARSLGMSYMQAMRTIILPQAFRRMLPALGNNAIAILKD 188 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +S+ S I + E+ A+ + + + Y ++ VY ++T Sbjct: 189 SSLISAIGLAELAYAARTVAGASARYWEPYITISCVYWVMT 229 >gi|71734118|ref|YP_275674.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|298488143|ref|ZP_07006180.1| Arginine/ornithine ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71554671|gb|AAZ33882.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157422|gb|EFH98505.1| Arginine/ornithine ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320323222|gb|EFW79310.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320329747|gb|EFW85736.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330881452|gb|EGH15601.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] gi|330889203|gb|EGH21864.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] gi|330960459|gb|EGH60719.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] gi|330988692|gb|EGH86795.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] Length = 229 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 13/215 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 +TL +A S +++++G +R+ I+ + Y + RG P LV + +IFYG Sbjct: 15 LTLQLALSSMALAIVLGLIGVALRLS-PVRWIAWLGDLYSTVIRGIPDLVLILLIFYGGQ 73 Query: 81 ------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P +G I D +A I +L F AY+SE R + ++IPKGQ +A A GL Sbjct: 74 DLLNRVAPLLGFDDYIDLDPLLAGICTLGFIFGAYLSETFRGAFMAIPKGQAEAGMAYGL 133 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + + I++PQ I + ++ ++ + K+T++ S + + ++ A++ T +P Sbjct: 134 SSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATREPFT 193 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + +A +YL++TS + +E + + D Sbjct: 194 FFLAVAAMYLVITSVSLLALRYLEKRYSVGVRAAD 228 >gi|77414490|ref|ZP_00790639.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] gi|77159469|gb|EAO70631.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] Length = 267 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 15/204 (7%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D+ P +L + +TL + + LI+ A+++I I+ I +V RGT Sbjct: 31 VLDAIPSIL-ERLPITLLLTVAGALFGLILALIFAIVKIN-RVKILYPIQALFVSFLRGT 88 Query: 69 PLLVQLFVIFYGLP------HIGIVFD-------SFVAIIISLTLNFSAYISEIIRSSII 115 P+LVQL + +YG+P + FD + V I + N +AY SE IR++I+ Sbjct: 89 PILVQLMLSYYGIPLFLKFLNQKYGFDWNINAIPASVFAITAFAFNEAAYTSETIRAAIL 148 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ +G+ +A+ ++G+T Q R +I+P + L + I + K TS+A I E+F Sbjct: 149 SVDQGEIEAARSLGMTSAQVYRRVIIPNAAVVATPTLINTLIGLTKGTSLAFNAGIVEMF 208 Query: 176 QTAQRIVSTTYQPLIIYCELAFVY 199 AQ + + Y+ Y +A VY Sbjct: 209 AQAQIMGGSDYRYFERYISVALVY 232 >gi|28869032|ref|NP_791651.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28852272|gb|AAO55346.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] gi|330879704|gb|EGH13853.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 229 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 13/215 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 +TL +A S +++++G +R+ I+ + Y + RG P LV + +IFYG Sbjct: 15 LTLQLALSSMALAIVLGLIGVALRLS-PVRWIAWLGDLYSTVVRGIPDLVLILLIFYGGQ 73 Query: 81 ------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P +G I D +A I +L F AY+SE R + ++IPKGQ +A A GL Sbjct: 74 DLLNRVAPLLGFDDYIDLDPLLAGICTLGFIFGAYLSETFRGAFMAIPKGQAEAGMAYGL 133 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + + I++PQ I + ++ ++ + K+T++ S + + ++ A++ T +P Sbjct: 134 SSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATREPFT 193 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + +A +YL++TS + +E + + D Sbjct: 194 FFLAVAAMYLVITSVSLLALRYLEKRYSVGVRAAD 228 >gi|165920615|ref|ZP_02219586.1| amino acid ABC transporter, permease protein [Coxiella burnetii RSA 334] gi|165916817|gb|EDR35421.1| amino acid ABC transporter, permease protein [Coxiella burnetii RSA 334] Length = 223 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/173 (32%), Positives = 98/173 (56%), Gaps = 9/173 (5%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEI 109 + +V+I RGTPLLVQ+F+I+YG ++ F +I+L +N SAY + + Sbjct: 51 NVFVFIIRGTPLLVQIFIIYYGSGQFHWLRETILWSVLKRPFGCAVIALAINTSAYTTVL 110 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 +R +I SIP G+ +A+ A+GL+R + + II+P+ I S+E I ILK TS+A TI Sbjct: 111 LRGAIRSIPTGEIEAAKALGLSRWKAYQRIIIPRAIRIVLPAYSNEVIMILKGTSLAGTI 170 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 T+ +I + +++ TY+ + ++ +Y +L + + +E +T Y Sbjct: 171 TLMDIMGVTRHLIAMTYEVIPLFFLAGIIYFVLNALIMSVFYFLEKKLTFQYY 223 >gi|167739494|ref|ZP_02412268.1| histidine transport system permease protein [Burkholderia pseudomallei 14] Length = 194 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 13/173 (7%) Query: 42 IAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD----------SF 91 +AV R+ + +S + FY ++FRGTPL VQL +++ G+ + V + F Sbjct: 1 LAVARVS-KNRWLSTPVRFYTYVFRGTPLYVQLLLLYTGMYSLAFVREHAWLDAFFRSGF 59 Query: 92 VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP 151 I++ LN AY +EI +I +I G+ +A+ A G++ R +ILP ++ A+P Sbjct: 60 HCAILAFALNTCAYTTEIFAGAIRAIAHGEVEAARAYGMSPFTMYRRVILPSSLR-RALP 118 Query: 152 L-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L S+E I +L +T+VA T T+P+I + A+ S TY + A +YL ++ Sbjct: 119 LYSNEVILMLHATTVAFTATVPDILKVARDANSATYMAFQSFGIAALIYLAVS 171 >gi|149907744|ref|ZP_01896491.1| ABC-type arginine transport system, permease component [Moritella sp. PE36] gi|149809414|gb|EDM69343.1| ABC-type arginine transport system, permease component [Moritella sp. PE36] Length = 224 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/191 (27%), Positives = 103/191 (53%), Gaps = 8/191 (4%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A +TL +A S ++ L++ V + + +I+ + F+V + RG P ++ +F IF+ Sbjct: 12 ATKITLGLALTSLLVGLVLAILFCVAEMQ-KNPLIAKPISFFVTVLRGLPEILIVFFIFF 70 Query: 80 GLPHIGIVFDS-------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 G HI + F + +++L+L F++Y S+ +R++I S+ KGQ + A+G+ Sbjct: 71 GGTHILFLLTDEYYDISPFWSGVVALSLIFASYASQTLRAAIQSVSKGQQQGAQALGMGP 130 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 + I LPQ + L ++++ +LK T++ S I + ++ + A + +TY+P Sbjct: 131 VRCFLRITLPQAWRLALPGLGNQWMVLLKDTALVSLIGVTDLMKQADLLSGSTYKPFTFL 190 Query: 193 CELAFVYLILT 203 A +YLI+T Sbjct: 191 VAAAAIYLIIT 201 >gi|118587809|ref|ZP_01545219.1| ABC amino acid transporter, inner membrane subunit [Stappia aggregata IAM 12614] gi|118439431|gb|EAV46062.1| ABC amino acid transporter, inner membrane subunit [Stappia aggregata IAM 12614] Length = 211 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 104/183 (56%), Gaps = 7/183 (3%) Query: 28 ACISFVISL---IIGFFIAVIRI---FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 A IS V+++ ++GF +AV+ + +++ + YV R TPL+VQ+F + +GL Sbjct: 8 ALISAVLTIGGGVLGFLLAVVLAAVRHYKIPVLAQLAAAYVEFIRNTPLIVQMFFVAFGL 67 Query: 82 PHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 P + G + + +++L++NFSAY +EI+R+ + S+ GQ +A+ A+GL R + + Sbjct: 68 PLLLGYQWPFWAHALLALSINFSAYFAEILRAGLASLGAGQAEAADALGLPRWLSFVKVC 127 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 LPQ + L+S+FI + +T + S I + ++ I S ++ I+ L +YL Sbjct: 128 LPQAVAAMYPSLNSQFIFLFLTTGIISEIGVTDLTWAGLVIDSRNFRSFEIFFTLTIIYL 187 Query: 201 ILT 203 +++ Sbjct: 188 LMS 190 >gi|15612161|ref|NP_223813.1| amino acid ABC transporter permease [Helicobacter pylori J99] gi|4155694|gb|AAD06678.1| AMINO ACID ABC TRANSPORTER, PERMEASE PROTEIN [Helicobacter pylori J99] Length = 217 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 108/201 (53%), Gaps = 5/201 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + ++ S P + + +TL I+ ++SL++GF A++ ++F +S +++ Sbjct: 1 MALDW-DFMLHSIPAF-FKGLKLTLYISFFGILLSLLVGFLCAIV-LYFKTRFLSPVVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QRESALSLGFSPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQPLIIYCELAFVYLI 201 ++ Y+ L+ YLI Sbjct: 176 LIGIYYKTTESLLMLSLTYLI 196 >gi|322833420|ref|YP_004213447.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321168621|gb|ADW74320.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 231 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/196 (28%), Positives = 103/196 (52%), Gaps = 10/196 (5%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++ ++ F Q++ +VVTL +A S+++++ I + VIR+ + Sbjct: 1 MTLDFSKVLTGQFGQMIVDGMVVTLKLALGSWLLAMCIALLLVVIRLTHKRAA-EYFVRA 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPH---------IGIVFDSFVAIIISLTLNFSAYISEIIR 111 YV R P L+QL + ++ +P I F+ + +L L +AY SE IR Sbjct: 60 YVSYHRNVPTLIQLMMWYFAIPTLLPESVQMWINDFNAEFLFSMFALGLCQAAYFSEDIR 119 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S + +IP+GQ +AS A+G++ +++R +ILPQ I + L + + + K+TS+A I + Sbjct: 120 SGLRAIPEGQTEASRALGMSYTRSLRSVILPQGIRNALPSLLNHTVLLFKNTSLAMVIGV 179 Query: 172 PEIFQTAQRIVSTTYQ 187 E+ + I + T++ Sbjct: 180 AELTYVTRDIENQTFR 195 >gi|302334976|ref|YP_003800183.1| polar amino acid ABC transporter, inner membrane subunit [Olsenella uli DSM 7084] gi|301318816|gb|ADK67303.1| polar amino acid ABC transporter, inner membrane subunit [Olsenella uli DSM 7084] Length = 439 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 112/223 (50%), Gaps = 26/223 (11%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF-----------YVWIFRGT 68 I T+ +A VI+ + F+ +RI D + + F Y + RGT Sbjct: 169 GIATTVELALFGTVIAFFLAIFLVFLRIQQIDRPDNDAVRFLKVLGVGFARVYSSVVRGT 228 Query: 69 PLLVQLFVIFY---------GLP--HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 P++VQ +I++ G+ IG V+ +FVA +++++LN +AY+ E++R I ++ Sbjct: 229 PMMVQSLLIYFAGFAVLRGTGMSTTQIGSVWTTFVAGLVTISLNSTAYMMEVLRGGIEAV 288 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQ +A+ ++GL++ Q + ++ PQ I + LS+E + +K +SV S I + ++ Sbjct: 289 DAGQTEAARSLGLSQWQAMTKVVFPQGIKNAIPALSNELVVNIKDSSVLSVIGVFDLMFA 348 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + Y+ L +Y YLILT +I K+ S + H Sbjct: 349 TTTVAGIYYRQLEVYAVATLCYLILT----MIASKLLSIMAHH 387 >gi|209965981|ref|YP_002298896.1| amino acid ABC transporter, permease protein [Rhodospirillum centenum SW] gi|209959447|gb|ACJ00084.1| amino acid ABC transporter, permease protein [Rhodospirillum centenum SW] Length = 236 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 100/198 (50%), Gaps = 21/198 (10%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ +A +SF L++G A R+ + ++ + Y + RG P L+ ++++F+G Sbjct: 22 VTVAVAVLSFAGGLVLGSLAAAARLG-GNALLRGVAEVYTTVIRGVPALLVIWLLFFG-- 78 Query: 83 HIGIVFDSFVAII------ISLTLNF----------SAYISEIIRSSIISIPKGQWDASY 126 G F S+VA I L+ AY +E+IR ++ ++P GQ +A+ Sbjct: 79 --GSGFVSWVAGAFGYGGRIELSAFAVGVAAVATVSGAYAAEVIRGAVQAVPSGQTEAAR 136 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G+ R +R I++PQ + + L + + LK T++ S + E+ + + T Sbjct: 137 ALGMHRGLILRRIVVPQALRYALPGLGNVWQMTLKDTALVSVTALAELMRVSYVASGATR 196 Query: 187 QPLIIYCELAFVYLILTS 204 QP + Y A +Y++LT+ Sbjct: 197 QPFLFYLTAAAIYMVLTT 214 >gi|170694566|ref|ZP_02885718.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170140448|gb|EDT08624.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 237 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 104/196 (53%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + +S I + +AV R+ +S + Y ++FRGTPL VQL +I+ Sbjct: 21 SGLAVTLWLLVVSVGIGFCLAIPLAVARVS-KKRWLSTPVRLYTYVFRGTPLYVQLLLIY 79 Query: 79 YGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D+F I++ LN AY +EI +I S G+ +A+ A Sbjct: 80 TGMYSLEFVRSHQLLDAFFRSGFHCAILAFALNTCAYTTEIFAGAIRSTSHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++ R I++P + A+PL S+E I +L +T+VA T T+P+I + A+ S TY+ Sbjct: 140 GMSWFTMYRRIVIPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYR 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL+++ Sbjct: 199 SFDAFGLAALIYLVVS 214 >gi|288905474|ref|YP_003430696.1| amino acid ABC transporter permease [Streptococcus gallolyticus UCN34] gi|306831557|ref|ZP_07464715.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978464|ref|YP_004288180.1| amino acid ABC transporter permease [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732200|emb|CBI13765.1| putative amino acid ABC transporter, permease protein [Streptococcus gallolyticus UCN34] gi|304426342|gb|EFM29456.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178392|emb|CBZ48436.1| amino acid ABC transporter, permease protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 230 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/153 (34%), Positives = 89/153 (58%), Gaps = 10/153 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-----IGIVFDSF---VAIIISLTLNFSAYISEIIRS 112 YV+I R TP +V +F++FYGLP +GI + + V +I+++TL F+A ISE+ +S Sbjct: 59 YVFILRCTPPIVLIFLVFYGLPRFLEWWLGIDVNGWSRSVFVILAMTLLFAASISEVFKS 118 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 S ++PKGQ +A +IGLT QT I+LPQ + +++ I++LK ++A TI + Sbjct: 119 SYQALPKGQLEAGLSIGLTDYQTFVRILLPQAFRIALPNITTAIINLLKDIALAYTIGLV 178 Query: 173 EIFQTAQRIVSTTYQ--PLIIYCELAFVYLILT 203 ++ ++S L Y +A +Y +L Sbjct: 179 DLMGAGNLVISRNLGNYSLETYTAVAIIYWVLA 211 >gi|251790534|ref|YP_003005255.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247539155|gb|ACT07776.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 246 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 101/178 (56%), Gaps = 14/178 (7%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VT+ ++ +++I+ ++G + ++R ++S I YV +FR PL+VQ F + Sbjct: 27 SGLQVTVSLSLCAWIIAFLLGSLLGILRTV-PHRLLSGIGTCYVEMFRNVPLIVQFFSWY 85 Query: 79 YGLPHI-----GIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 +P + G+ F + F++ + L + +A + E +R+ I S+P+GQ A Sbjct: 86 LVIPELLPAKLGMWFKAELDPNIQFFLSSMFCLGMFTAARVCEQVRAGIQSLPRGQKAAG 145 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AIGLT QT R+++LP PL+SE ++++K++++ASTI + ++ A +++ Sbjct: 146 LAIGLTLPQTYRYVLLPNAYRVIVPPLTSEMLNLVKNSAIASTIGLMDMAAQAGKLLD 203 >gi|260103304|ref|ZP_05753541.1| amino acid ABC superfamily ATP binding cassette transporter [Lactobacillus helveticus DSM 20075] gi|260082885|gb|EEW67005.1| amino acid ABC superfamily ATP binding cassette transporter [Lactobacillus helveticus DSM 20075] Length = 219 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 73/140 (52%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 +F I+S I YV + R TPLL+QLF ++Y LP IG S A II L Y++ Sbjct: 43 YFKTPILSQIATAYVELARNTPLLIQLFFLYYALPVIGWRMSSVTAGIIGLIFLGGGYMA 102 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E + Q ++ A+G+ R Q R+++ PQ S L++ I ++K TS+ + Sbjct: 103 EGFTGGFQGVTDSQINSGEALGMNRFQLARYVVFPQGFALSMPALAANVIFLIKETSIFT 162 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I IPE+ TA ++ Y+ Sbjct: 163 VIAIPELTNTALDLIGMYYR 182 >gi|134296592|ref|YP_001120327.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia vietnamiensis G4] gi|134139749|gb|ABO55492.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia vietnamiensis G4] Length = 237 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 17/211 (8%) Query: 5 WFN-LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W N L D F + +TL + +S + + +AV R+ +S + Y + Sbjct: 9 WRNYLYTDGFRT---TGVAITLWLLVVSIGLGFCLSVPLAVARVS-KRKWLSGAVWLYTY 64 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVF----------DSFVAIIISLTLNFSAYISEIIRSS 113 +FRGTPL VQL + + GL + IV D +++ TLN AY +EI + Sbjct: 65 VFRGTPLYVQLLLCYTGLYSLQIVRGTPLLDAFFRDGMRCTLLAFTLNTCAYTTEIFAGA 124 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIP 172 I + G+ +A+ A G++ R +ILP + A+PL S+E I +L +T+VA T T+P Sbjct: 125 IKATSYGEIEAARAYGMSTFTMYRRVILPSALR-RALPLYSNEVILMLHATTVAFTATVP 183 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +I + A+ + S TY + A +YL+++ Sbjct: 184 DILKIARDVNSATYMSFHAFGIAALLYLVIS 214 >gi|271502696|ref|YP_003335722.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270346251|gb|ACZ79016.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 252 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 119/224 (53%), Gaps = 22/224 (9%) Query: 6 FNLIIDSFPQLLYAA------------IVVTLPIACISFVISLIIGFFIAVIRIFFSDTI 53 F++I D+F L++ +V++L IS V+ ++G +A++R ++ + Sbjct: 3 FSIIRDNFSYLMWGTYPDGPLGGAALTLVLSLMAGLISAVLGTVLGVALAMLR-GWAGGL 61 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRS 112 +++++ F FR P+++ +F ++ LP + G+ ++ +L L SAY++ +++ Sbjct: 62 LAVVLGF----FRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHGVKA 117 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I++I GQW A ++GL R QT+ HI+LPQ + +++IS++K TS+A + + Sbjct: 118 GIMAIGLGQWQAGMSLGLGRWQTLWHIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVG 177 Query: 173 EI-FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 E+ F Q + P ++ +A VY I FC + + + Sbjct: 178 ELTFLATQVNNRSMVYPTEVFLFIALVYFI---FCLTLDLLAQG 218 >gi|269102812|ref|ZP_06155509.1| arginine ABC transporter permease protein ArtQ [Photobacterium damselae subsp. damselae CIP 102761] gi|268162710|gb|EEZ41206.1| arginine ABC transporter permease protein ArtQ [Photobacterium damselae subsp. damselae CIP 102761] Length = 242 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 101/179 (56%), Gaps = 10/179 (5%) Query: 35 SLIIGFFIAVI---RIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-----G- 85 SL +G +AVI +++ +V + RG P ++ + IF+G I G Sbjct: 24 SLAVGLVLAVIFAAGEMSRHKLLAWTTTGWVTLLRGLPEILVVLFIFFGSSQILFYITGD 83 Query: 86 -IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQT 144 I F++ +I+L+L FSAY S+ IR ++ ++ KGQ +A+ A+GL+ +T IILPQT Sbjct: 84 YIEVSPFLSGVIALSLIFSAYASQTIRGALKAVSKGQREAASALGLSSGRTFFKIILPQT 143 Query: 145 ITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + L+++++ +LK T++ S I + ++ + AQ + T++ Y A +YL++T Sbjct: 144 VRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHESFTWYATAAAIYLVIT 202 >gi|222106269|ref|YP_002547060.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221737448|gb|ACM38344.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 260 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 6/124 (4%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF------VAIIISLTLNFSAYISEIIRSSI 114 YV +FR P LV +F Y P IVF ++ V ++ L + SAYI+EI R +I Sbjct: 92 YVQVFRNAPHLVLIFATTYIFPFEIIVFGNYLSFPDWVKAMVGLAIPASAYIAEITRGAI 151 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +SIP QW+A+ +G +R Q +R IILPQ + S P + SI TS+AS + + E+ Sbjct: 152 LSIPTAQWEAAQGLGFSRWQALRWIILPQCLRRSLPPWMNVLASITMGTSLASLVGVHEL 211 Query: 175 FQTA 178 A Sbjct: 212 LHAA 215 >gi|329117796|ref|ZP_08246513.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] gi|326908201|gb|EGE55115.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] Length = 267 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 91/176 (51%), Gaps = 15/176 (8%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP--------------HIGIVFDSFVAIIISLTLNF 102 I +V RGTP+LVQL + +YG+P +I + SF AI + N Sbjct: 77 IQAVFVSFLRGTPILVQLMLTYYGIPLFLKYLNLTYGLNWNINAIPASFFAIT-AFAFNE 135 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY+SE IR++I+S+ G+ +A+ ++G++ KQ + +I+P + L + I + K Sbjct: 136 AAYMSETIRAAILSVDDGEIEAAKSLGMSNKQVYQRVIVPNAAVVATPTLINGLIGLTKG 195 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 TS+A I E+F AQ + + Y+ Y +A VY +++ F + IE + Sbjct: 196 TSLAFNAGIVEMFAQAQILGGSDYRYFERYISVALVYWLISFFVEQLGAYIERRMA 251 >gi|295699404|ref|YP_003607297.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1002] gi|295438617|gb|ADG17786.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 257 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 86/143 (60%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TP LVQLF +F+GLP +GI D A I+++++N AY +EI+R+ I SI +G Sbjct: 60 YVELIRNTPFLVQLFFVFFGLPSLGIHIDEVQAAILAMSVNLGAYATEIVRAGIDSISRG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q A+ A+GL +Q R+++LPQ + L + + ++ ++V S I++P++ A Sbjct: 120 QVQAAQALGLQGRQVFRYVVLPQALANVFPALLGQVLIVMLGSAVVSQISVPDLTYAANF 179 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I S ++ Y + YL+++ Sbjct: 180 IQSRNFRSFESYVIITATYLLMS 202 >gi|91782896|ref|YP_558102.1| ABC lysine/arginine/ornithine transporter, innermembrane subunit [Burkholderia xenovorans LB400] gi|91686850|gb|ABE30050.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia xenovorans LB400] Length = 237 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 102/196 (52%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S I +AV R+ +S + Y ++FRGTPL VQL +I+ Sbjct: 21 SGLAVTLWLLVASVGIGFCAAIPLAVARVS-KKRWLSTPVRLYTYVFRGTPLYVQLLLIY 79 Query: 79 YGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D+F I++ LN AY +EI +I S G+ +A+ A Sbjct: 80 TGMYSLEFVRSHQLLDAFFRSGFHCAILAFALNTCAYTTEIFAGAIRSTSHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++ R I++P + A+PL S+E I +L +T+VA T T+P+I + A+ S TYQ Sbjct: 140 GMSGFTMYRRIVIPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYQ 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL+++ Sbjct: 199 SFDAFGLAALIYLVVS 214 >gi|317404138|gb|EFV84586.1| amino acid ABC transporter permease [Achromobacter xylosoxidans C54] Length = 219 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/149 (32%), Positives = 88/149 (59%), Gaps = 5/149 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ + +GTPLLV + + F+G G+ + A +++T+ SA++ EI R I ++PK Sbjct: 56 YIQVIQGTPLLVLMGLCFFGPSLFGLGELSALAAAGLAMTIYSSAFLGEIWRGCIQAVPK 115 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS-TITIPEIFQTA 178 QW+A+ +GL+R Q + ++LPQ + + P + I+K+TS+AS I PE+ A Sbjct: 116 NQWEAAECLGLSRLQRMAKVVLPQALRIATPPTVGFLVQIIKNTSIASLVIGYPELAYNA 175 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCY 207 + + ++T+QP + + A +Y ++ CY Sbjct: 176 KILNNSTFQPFVYFGCAAILYFLM---CY 201 >gi|301630238|ref|XP_002944229.1| PREDICTED: glutamine transport ATP-binding protein glnQ-like [Xenopus (Silurana) tropicalis] Length = 444 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 52/203 (25%), Positives = 105/203 (51%), Gaps = 7/203 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL ++ + F+ + G +A+ R + ++ YV + +G PL V +F+ ++G+ Sbjct: 19 TLVLSALGFIGGALTGLPLALARAR-GGRWLRVLTGAYVQLVQGIPLPVIMFLAYFGISI 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 G S VA +++T SAY+ EI + I ++PK QW+A+ + LT Q H++LPQ Sbjct: 78 AGFDLPSLVAAGLAMTAYSSAYLGEIWKGCIQAVPKTQWEAAACLALTPWQRAVHVVLPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + P + I+K++S A I ++ +A+ + ++T+ P +++ A +Y Sbjct: 138 AARIAVAPTVGFLVQIVKNSSYAVVIGFFDLTYSARVVNNSTFAPFVVFSLAAVLYF--- 194 Query: 204 SFCY---IIQIKIESSVTQHTYS 223 + CY + ++E + + +Y Sbjct: 195 AICYPLSTLSYRLEKRLVRKSYG 217 >gi|163857135|ref|YP_001631433.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella petrii DSM 12804] gi|163260863|emb|CAP43165.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella petrii] Length = 223 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 74/122 (60%) Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLLVQ++ +FY LP G I++L ++++AY +E+ R+ I S+P+GQ +A+ Sbjct: 65 RSTPLLVQMYFLFYVLPQSGARMSPLATGILALGVHYAAYCAEVYRAGIESVPRGQLEAA 124 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+ ++ +T ++LPQ I L + +++ K T + S IT+ E+ Q ++ I S T Sbjct: 125 TALNMSPWRTAVGVVLPQAIPPVVPALGNYLVAMFKDTPLLSAITVVELLQQSKIIGSAT 184 Query: 186 YQ 187 ++ Sbjct: 185 FR 186 >gi|229820932|ref|YP_002882458.1| polar amino acid ABC transporter, inner membrane subunit [Beutenbergia cavernae DSM 12333] gi|229566845|gb|ACQ80696.1| polar amino acid ABC transporter, inner membrane subunit [Beutenbergia cavernae DSM 12333] Length = 294 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 45/142 (31%), Positives = 84/142 (59%), Gaps = 3/142 (2%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFV---AIIISLTLNFSAYISEIIRSSIISIPKGQ 121 FR P+L+ + VI+ GL +V S V A++ LTL A I+E++RS + +P+GQ Sbjct: 112 FRAVPVLMMMIVIYLGLGFSRVVDASLVPLIAVVGGLTLYNGAVIAELVRSGVFGLPRGQ 171 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+YA+G+T Q++R + LPQ + L S+F+ ILK +++ S +T E+ Q ++++ Sbjct: 172 KEAAYAVGMTHGQSLRVVELPQALLAMLPSLVSQFVVILKDSALGSWVTYGELLQFSRQL 231 Query: 182 VSTTYQPLIIYCELAFVYLILT 203 ++ L A +++++ Sbjct: 232 GTSDGNLLQTLLTAAVIFIVIN 253 >gi|213022525|ref|ZP_03336972.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 109 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 40/104 (38%), Positives = 65/104 (62%) Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I KGQW+A+ +IG+T QT+R ILPQ + PLS+ FIS++K TS+A+TI +PE+F+ Sbjct: 1 IDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFR 60 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 AQ I S T + +Y + +Y ++ + +Q E+ + + Sbjct: 61 QAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQ 104 >gi|182435531|ref|YP_001823250.1| putative glutamate ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464047|dbj|BAG18567.1| putative glutamate ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 215 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 116/203 (57%), Gaps = 13/203 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVW 63 N+++D+FP+ + T+ I +S VI+L +G IA R+ + + + +F +V Sbjct: 2 NVLLDNFPEF-RDGFIGTVSITAVSSVIALFLGVIIAGFRV----SPVPPLRYFGTAWVT 56 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIII-SLTLNF--SAYISEIIRSSIISIPKG 120 + R TPL + + F+ +P I +F ++ SL L F S+++ E +RS I ++P G Sbjct: 57 LMRNTPLTLLFLIFFFVVPEI--LFPGMSPFVLGSLALGFYTSSFVCEAVRSGINTVPLG 114 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ +IG+T QT++ ++LPQ T PLSS FI++ K++++A ++ E+F + Sbjct: 115 QAEAARSIGMTFAQTLQIVVLPQATRTVIPPLSSIFIALTKNSAIAGAFSVAELFGWQKL 174 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + Y + ++ +A YL++T Sbjct: 175 MSDKGYDIVPVFIWVAIGYLVVT 197 >gi|257482805|ref|ZP_05636846.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331012328|gb|EGH92384.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 229 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 13/215 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 +TL +A S +++++G +R+ I+ + Y + RG P LV + +IFYG Sbjct: 15 LTLQLALSSMALAIVLGLIGVALRLS-PVRWIAWLGDLYSTVIRGIPDLVLILLIFYGGQ 73 Query: 81 ------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P +G I D +A I +L F AY+SE R + ++IPKGQ +A A GL Sbjct: 74 DLLNRVAPLLGFDDYIDLDPLLAGICTLGFIFGAYLSETFRGAFMAIPKGQAEAGVAYGL 133 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + + I++PQ I + ++ ++ + K+T++ S + + ++ A++ T +P Sbjct: 134 SSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATREPFT 193 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + +A +YL++TS + +E + + D Sbjct: 194 FFLAVAAMYLVITSVSLLALRYLEKRYSVGVRAAD 228 >gi|257056749|ref|YP_003134581.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] gi|256586621|gb|ACU97754.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] Length = 287 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 96/175 (54%), Gaps = 9/175 (5%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIFRGTPLLVQLFVI 77 AA+ T+ + V++L+ G A R+ SD +I + V FR PL+V +F Sbjct: 64 AALGNTVKAFATAAVLALVFGAIFATARL--SDYAVIRVPAMLVVEFFRAVPLVVMIFFF 121 Query: 78 FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 YGL + F ++++ LTL A ++E+ R+ I+S+PKGQ +A+YAIG+ + Q +R Sbjct: 122 HYGLA----LGAPFYSVVLGLTLYNGAVLAEVFRAGILSLPKGQSEAAYAIGMRKSQVMR 177 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY--QPLI 190 ++LPQ + + S+ + +LK T++ IT E+ A+ + S +PLI Sbjct: 178 LVLLPQALRAMMPAIISQLVVLLKDTALGFLITYEELLLYARYLGSMLEFDRPLI 232 >gi|163748032|ref|ZP_02155354.1| putative transmembrane permease component of ABC transporter [Oceanibulbus indolifex HEL-45] gi|161378692|gb|EDQ03139.1| putative transmembrane permease component of ABC transporter [Oceanibulbus indolifex HEL-45] Length = 235 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 14/219 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A + +T+ +A ++ I L+IGF +A + I Y I RG P ++ LFV++ Sbjct: 18 AGLAITMQLAIVTLPIGLLIGF-VAAFASMSRHAGLRAIGFGYTTIMRGLPEILTLFVVY 76 Query: 79 YGLP-------------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 G+ I F F A + +L + F A+ E++R + S+ +GQ +A Sbjct: 77 NGVGLLLNKLAVWWNPGGTNIEFSPFAAGVTALAMVFGAFAGEVLRGAFQSLDEGQMEAG 136 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 AIG++ ++ I LPQ + L + +I++LK T++ S I + ++ + + V T Sbjct: 137 RAIGMSPRKIFFRIRLPQVWRFALPGLGNLWINMLKDTALVSIIALDDLMRMTKVAVGVT 196 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 QP Y VY L ++ +E + V Sbjct: 197 KQPFTFYLLACLVYWALCVLSEVVLAHMERRANRGIRRV 235 >gi|124026133|ref|YP_001015249.1| amino acid ABC transporter permease [Prochlorococcus marinus str. NATL1A] gi|123961201|gb|ABM75984.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Prochlorococcus marinus str. NATL1A] Length = 299 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 108/203 (53%), Gaps = 25/203 (12%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 DS+ L+ + +L + S +++ G I R +++++ LI Y+ I R TPL Sbjct: 63 DSYAWALFIGWLNSLKVIVSSLILATFFGTLIGFARTG-TNSLLGLISAGYITIIRQTPL 121 Query: 71 LVQL----FVIFYGLPHI-------------------GIVFDS-FVAIIISLTLNFSAYI 106 L+QL FV F GL G+ F S F+A++ L++ SAYI Sbjct: 122 LLQLMFWYFVGFLGLKDNMFIQIKNIFNISNKGIEFSGLTFSSEFLALLFGLSIFTSAYI 181 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +E+IR I+S+ +GQW+A ++G++ ++ + IILPQ + L+S+++++ K++++A Sbjct: 182 AEVIRGGILSVSRGQWEAFRSLGISERKGLIRIILPQALPAIIPGLTSQYLNLAKNSTLA 241 Query: 167 STITIPEIFQTAQRIVSTTYQPL 189 + +I+ I++ T + + Sbjct: 242 IAVGYSDIYAINDTIINQTGRAI 264 >gi|306833703|ref|ZP_07466830.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] gi|304424473|gb|EFM27612.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] Length = 230 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/153 (34%), Positives = 89/153 (58%), Gaps = 10/153 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-----IGIVFDSF---VAIIISLTLNFSAYISEIIRS 112 YV+I R TP +V +F++FYGLP +GI + + V +I+++TL F+A ISE+ +S Sbjct: 59 YVFILRCTPPIVLIFLVFYGLPRFLEWWLGIDVNGWSRSVFVILAMTLLFAASISEVFKS 118 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 S ++PKGQ +A +IGLT QT I+LPQ + +++ I++LK ++A TI + Sbjct: 119 SYQALPKGQLEAGLSIGLTDYQTFVRILLPQAFRIALPNITTAIINLLKDIALAYTIGLV 178 Query: 173 EIFQTAQRIVSTTYQ--PLIIYCELAFVYLILT 203 ++ ++S L Y +A +Y +L Sbjct: 179 DLMGAGNLVISRNLGNYSLETYTAVAIIYWVLA 211 >gi|50123395|ref|YP_052562.1| amino acid ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49613921|emb|CAG77374.1| probable amino acid ABC transporter, permease protein [Pectobacterium atrosepticum SCRI1043] Length = 256 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 119/215 (55%), Gaps = 5/215 (2%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L++ +P ++ TL I+ ++ ++S +G + + R+ +S +V+ RG Sbjct: 15 LLVGQYPSGPLGGVLCTLLISLLAVLLSFPLGVLVGLARLS-PWRWLSWPATCWVYTLRG 73 Query: 68 TPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 PL++ +F ++ +P IG F ++ +L + SAYI+EI+R I ++P GQ++AS Sbjct: 74 IPLMMVVFWTYFCVPLLIGHNISGFSTMLCTLVIYESAYIAEIVRGGIQALPSGQYEASR 133 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 A+G++ + +R +ILPQ + S L S+ +SI+K +++ I +PE+ A ++ + Sbjct: 134 ALGMSHLKALRLVILPQALFNSLPSLISQLVSIIKDSTLGYVINVPELTYAANQVSNQLL 193 Query: 187 -QPLIIYCELAFVYLILT-SFCYIIQIKIESSVTQ 219 +P ++ +A Y I+ SF ++ ++ES + Sbjct: 194 TKPFQVFAIVALSYYIICFSFTFLAN-RLESWIAN 227 >gi|326333120|ref|ZP_08199369.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Nocardioidaceae bacterium Broad-1] gi|325949103|gb|EGD41194.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Nocardioidaceae bacterium Broad-1] Length = 322 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 67/237 (28%), Positives = 120/237 (50%), Gaps = 31/237 (13%) Query: 2 KYEWFNLIIDSF---PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 +Y W ++ +F P +L +V+TL + V S ++G +AV+R+ ++ ++S + Sbjct: 57 RYHWD--VVGAFFLRPSIL-DGLVLTLWLTAAVLVSSYLLGIVLAVMRLS-TNPVLSSVS 112 Query: 59 HFYVWIFRGTPLLVQLFVIF----------YGLP--------HIGIVFDSFVAIIISLTL 100 Y+W FR P L+QL F G+P +F +A + LT Sbjct: 113 AVYIWFFRSVPPLLQLLFWFQMASLYPQISLGIPFLKPFVTIETAHLFSGLLAAFVGLTF 172 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSE-FISI 159 + +A+ +EIIR ++S+ GQ +A+ A+GL++ + I+LPQ + + +P S I + Sbjct: 173 DIAAFAAEIIRGGLVSVEAGQTEAAKALGLSKARIFWRIVLPQAM-PAIIPASGNLLIGL 231 Query: 160 LKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 LK TS+ S I + ++ + Q I + Y PL++ + YLIL + IQ +E Sbjct: 232 LKGTSIVSVIAVQDLLYSVQLIYAQNYLVIPLLLVATIW--YLILVTVLSTIQFFVE 286 >gi|209547537|ref|YP_002279455.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538781|gb|ACI58715.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 219 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 99/184 (53%), Gaps = 1/184 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I +T+ I+ ++ + ++G F+ + + + + ++ + + Y I RGTP+LV + +Y Sbjct: 19 GIGMTVSISLLAILAGSVLGVFVG-LALVYGNVVLRVAVRAYTDIIRGTPVLVLVLASYY 77 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 +G+ F A +++L + S+++ EI+R ++ +IPKGQ +A+ AIGLT QT + Sbjct: 78 VSAAVGLDLGPFSAGVLALAIFCSSHVGEIVRGALQAIPKGQTEAAKAIGLTFTQTFTSV 137 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 + PQ + + ++K++++ S I + E+ Q I+S + L Y +Y Sbjct: 138 LWPQAMRQCLPAWVNTAAEMVKASTLLSVIGVAELLLRTQEIISRNFMSLQFYFLAGGLY 197 Query: 200 LILT 203 I+ Sbjct: 198 FIVN 201 >gi|160899042|ref|YP_001564624.1| polar amino acid ABC transporter inner membrane protein [Delftia acidovorans SPH-1] gi|160364626|gb|ABX36239.1| polar amino acid ABC transporter, inner membrane subunit [Delftia acidovorans SPH-1] Length = 349 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 61/248 (24%), Positives = 115/248 (46%), Gaps = 53/248 (21%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 DS+ + + A + T+ A + ++ ++G + V + ++ + YV + R PL Sbjct: 90 DSYLRAVAAGVANTVRAAVPALALATMLGLLLGVAAVA-RHPLLRGAVRLYVDVARNIPL 148 Query: 71 LVQLFVIFY------------------------GLPHIGIVFDS---------------- 90 LVQ+ + ++ GL G V+DS Sbjct: 149 LVQVLLWYFALTSLLPDVDHPLAIGPLGFLSKAGLALPGPVYDSAAGWHWSSPQPGMFSI 208 Query: 91 ---------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 F+A++ +L L +AY +EI+R+ + ++P+GQW+A+ A+G+ R Q +R ++L Sbjct: 209 DGGLALTPEFLALVGALGLYAAAYCAEIVRAGLQAVPRGQWNAASALGMRRGQQLRLVVL 268 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL- 200 PQ + P ++ +S +K++S+A I P++ A +S T Q + +A VYL Sbjct: 269 PQALRVIIPPYTNLALSTIKNSSLAVAIGYPDVVMVANTAMSQTGQAIECVTIIAVVYLA 328 Query: 201 --ILTSFC 206 +LTS Sbjct: 329 INLLTSLA 336 >gi|86359544|ref|YP_471436.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] gi|86283646|gb|ABC92709.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 272 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 22/189 (11%) Query: 53 IISLIMHFYVWIFRGTPLLVQLF-VIFYGLPH--------IGIVFDSFVA---------- 93 ++ I FY+ I RG P+LV LF V F G P I + S VA Sbjct: 80 VLRQIARFYIEIIRGIPMLVLLFYVAFVGAPGFVASYNFVITPLVKSGVAEPILVRDLSL 139 Query: 94 ---IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 II+L + +S++I+EI R+ S+ GQ +A+ ++GL+R + R ++ PQ I Sbjct: 140 MWRAIIALMIGYSSFIAEIFRAGFQSVDIGQIEAAKSLGLSRYRRFRLVVFPQAIRVIFP 199 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 PLS++F+S++K +S+ S + + +I Q + S +++ Y + ++YLILT + Sbjct: 200 PLSNDFVSMVKDSSLVSVLGVADITQMGKVYASGSFRFFETYSIVTYIYLILTIGLSLFL 259 Query: 211 IKIESSVTQ 219 +IE + Q Sbjct: 260 RRIEKKMKQ 268 >gi|282899900|ref|ZP_06307861.1| Amino acid ABC transporter, permease protein, 3- TM region protein, His/Glu/Gln/Arg/opine [Cylindrospermopsis raciborskii CS-505] gi|281195170|gb|EFA70106.1| Amino acid ABC transporter, permease protein, 3- TM region protein, His/Glu/Gln/Arg/opine [Cylindrospermopsis raciborskii CS-505] Length = 313 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 112/224 (50%), Gaps = 33/224 (14%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTP 69 DS+ + L +V +L +A + + + ++G + R+ SD ++ I YV IFR TP Sbjct: 73 DSYGRALGVGLVNSLRVATLGILFATVVGITAGIGRL--SDNWLVRNISLVYVEIFRNTP 130 Query: 70 LLVQL----FVIFYGLPH-------IGIVFDS-------------------FVAIIISLT 99 LL+QL F +F LP G+ + S F +++ LT Sbjct: 131 LLLQLLFWYFGVFLSLPRPENKISLFGLGYLSQNGIDLPTLTYQGVNLTPEFSTLLLGLT 190 Query: 100 LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISI 159 A+I+EI+R+ I S+ +GQ +A ++GL +R II PQ + PL+S+++++ Sbjct: 191 FYTGAFIAEIVRAGIKSVSQGQREAGLSLGLRPGLLMRLIIFPQALKLIVPPLTSQYLNL 250 Query: 160 LKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +K++S+A I P+I+ A + T + + + L YL L+ Sbjct: 251 MKNSSLAIAIGYPDIYFVASTTFNQTGKAVEVMILLMITYLTLS 294 >gi|302551654|ref|ZP_07303996.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces viridochromogenes DSM 40736] gi|302469272|gb|EFL32365.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces viridochromogenes DSM 40736] Length = 216 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 70/122 (57%) Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TPLLVQLF +FY LP G+ F + + ++ L++S Y ++ R+ I ++P GQW+A+ Sbjct: 63 RNTPLLVQLFFLFYVLPEWGLTFSALSTGVFAIGLHYSTYTMQVYRAGIEAVPVGQWEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+ L ++T +ILPQ + L + I++LK T + IT+ E+ A+ Sbjct: 123 TALNLPLRRTWTAVILPQAVRRVIPALGNYVIAMLKDTPMLMAITVLEMLGHARLFSQEH 182 Query: 186 YQ 187 +Q Sbjct: 183 FQ 184 >gi|218507511|ref|ZP_03505389.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli Brasil 5] Length = 219 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 107/201 (53%), Gaps = 8/201 (3%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 SF + + +T+ +A +S + +G F+A+ ++ + +L+ Y I RG P L Sbjct: 3 SFALQFFNGLQITVLLALVSGALGSFLGLFVAMAKLS-RLGVSALLGQAYTTIVRGLPEL 61 Query: 72 VQLFVIFYG-------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + + V+++G L + ++F A + +L + F AY +EI R +I+S+P+GQ +A Sbjct: 62 LVILVVYFGGTAAITALTGRYVEINAFAAGVAALMIVFGAYCAEIFRGAIMSVPRGQVEA 121 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++GL QT +ILPQ + + + ++S++K TS+ S + + +I + A + Sbjct: 122 ARSLGLKPWQTWLFVILPQMMRVALPAYGNLWVSLVKDTSLVSVVGLTDIMRVAFIGAGS 181 Query: 185 TYQPLIIYCELAFVYLILTSF 205 PL Y + +YL LTS Sbjct: 182 MRAPLPFYLVASALYLALTSL 202 >gi|158425755|ref|YP_001527047.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158332644|dbj|BAF90129.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 224 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 1/203 (0%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M Y + I + L+ + +T+ + + V+ ++ G A R + ++ Sbjct: 1 MAYTFDYGAIVPYTPLIAKGVGITVELTVVGGVLGVLFGIVCAWARSLGPKWLRPPVV-L 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TP L+QLF IF+GLP +G+ A I ++ +N AY EIIR+ I + P+G Sbjct: 60 YVELIRNTPFLIQLFFIFFGLPSLGVSLTEMQAAIFAMVINLGAYGCEIIRAGIEATPRG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A ++ +TR QT RH++L + LSS+ + ++ ++V S I + +I AQ Sbjct: 120 QFEAGASLAMTRIQTFRHVVLVPALQRIWPALSSQIVIVMFGSAVCSQIAVEDITFAAQF 179 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I S T++ +Y +YL+L Sbjct: 180 IQSRTFRAFEVYILATILYLVLA 202 >gi|315587059|gb|ADU41440.1| ABC superfamily ATP binding cassette transporter, permease protein [Helicobacter pylori 35A] Length = 217 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 101/187 (54%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + + S P L + +TL I+ ++SL++GF A+I ++F IS I++ Sbjct: 1 MALDW-DFMFHSIPMFL-KGLELTLYISFFGILLSLLVGFLCAII-LYFKTRFISPIVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QKESALSLGFSPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQ 187 + Y+ Sbjct: 176 FIGIYYK 182 >gi|257784251|ref|YP_003179468.1| polar amino acid ABC transporter, inner membrane subunit [Atopobium parvulum DSM 20469] gi|257472758|gb|ACV50877.1| polar amino acid ABC transporter, inner membrane subunit [Atopobium parvulum DSM 20469] Length = 225 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 100/190 (52%), Gaps = 8/190 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ + T+ I IS V+S+ +G + + + ++ I+ ++ Y+ I R P LV LFV Sbjct: 16 LFGGLATTVYIGLISVVLSIPLGILVGLF-MTSNNKIVRTLLRVYLEIVRVMPQLVLLFV 74 Query: 77 IFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +F+G + FD A I+ T +A + +++R ++ SIP Q+D ++ +GL+R+QT Sbjct: 75 VFFGTSEWFDVNFDGIEASIVVFTFWGAAELGDLVRGALESIPASQYDGAFVLGLSRQQT 134 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS------TTYQPL 189 +ILPQ + P + ++K+TS+ + I + E+ + +I T L Sbjct: 135 FFQVILPQALRRLLPPAINLITRMIKTTSLCNLIGVVELLRVGSQITDFYRFMFPTDGAL 194 Query: 190 IIYCELAFVY 199 IY + F+Y Sbjct: 195 WIYGAIFFLY 204 >gi|91789815|ref|YP_550767.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91699040|gb|ABE45869.1| amino acid ABC transporter membrane protein 1, PAAT family [Polaromonas sp. JS666] Length = 233 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 82/150 (54%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 I ++ YV R TP +VQLF I++GL +G + +++L LN SAY +EIIR+ Sbjct: 53 IPRLVTLYVEFLRNTPFIVQLFYIYFGLGSMGFPIPPVMGALLALMLNLSAYSTEIIRAG 112 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SI + Q +A ++ +TR Q RH+++ + LSS+F+ + +TSV S I + + Sbjct: 113 IDSIHRSQLEAGLSLAMTRAQLYRHVVIMPALARVWPALSSQFVLTMLATSVCSFIPVTD 172 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + + S T + Y A +YL + Sbjct: 173 LMAATKFVESNTSRGFEAYLIPAPIYLTMA 202 >gi|91783383|ref|YP_558589.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91687337|gb|ABE30537.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia xenovorans LB400] Length = 235 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/220 (25%), Positives = 108/220 (49%), Gaps = 13/220 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L I T+ + + + +IG A + I+F ++ + V + R TP LVQLFV Sbjct: 17 LLRGIGTTVAVCVCAIALMFVIGIIGAAL-IYFRVPVLETLTTVVVELLRNTPPLVQLFV 75 Query: 77 IFYGLPHIGI------------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 +++ L +G+ VF F +++SL L + EI+RS + ++P DA Sbjct: 76 LYFTLSELGLSVRNLATGQQIPVFSGFTCMVLSLALYNGSIAVEIVRSGLHAVPDATVDA 135 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G +R + HI LP + S +++ +S++K++S A+ + + ++ A +I Sbjct: 136 ARSLGYSRLRIFWHIQLPMAMRLSTTQMTNNIVSLIKTSSQAAFVAVADVMYYATQITLE 195 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 ++ L + + YL+L SF + +I +V Y V Sbjct: 196 NFRNLEVMLTVWVCYLVLASFASTVAGRIGRAVRIPGYGV 235 >gi|157370638|ref|YP_001478627.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157322402|gb|ABV41499.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 230 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 45/208 (21%), Positives = 114/208 (54%), Gaps = 13/208 (6%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 ++I+ P L + A++ +L + +S ++L +G A+I++F + + Y + RG Sbjct: 1 MVIEYLPLLAHGALL-SLCVMLVSLAVALTLGMINALIKLF-GPRWLRWVSTGYTTLVRG 58 Query: 68 TPLLVQLFVIFYGLPHIGIV-----------FDSFVAIIISLTLNFSAYISEIIRSSIIS 116 P LV + ++F+G + F++F++ ++++ F AY +E R + ++ Sbjct: 59 IPELVIMLLLFFGGEMLVNGLLGLVGLGPLRFNTFISGVLAIGFVFGAYYTETFRGAFLT 118 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + +GQ +A+ A G+ Q R ++LPQ ++ + +++ ++ ++K++++ S + + ++ Sbjct: 119 VERGQLEAAMAYGMRPGQVFRRVLLPQMLSFAIPGINNNWLGLMKASALVSILGLEDMVW 178 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTS 204 A++ T +P + Y +A +Y+ +T+ Sbjct: 179 LAEQAGRATQKPFLFYFLVALIYMAITA 206 >gi|285808423|gb|ADC35949.1| putative amino acid ABC transporter permease/substrate binding protein [uncultured bacterium 98] Length = 133 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 78/131 (59%) Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 +F+A +I L LN++AY SEI R +++++P+GQ DA+ +GLT +Q +R + PQ + Sbjct: 3 AFLAALIGLGLNYAAYESEIYRGALLAVPRGQLDAARTLGLTERQILRLVRGPQAFRLAL 62 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYII 209 P++++FI++LK +S+ S IT+ E+ + S ++ A +YL+L+ + Sbjct: 63 APMTNDFIALLKDSSLVSVITVVELTKQTSIFASNIGSWVVPGAMCAAMYLVLSLPLARL 122 Query: 210 QIKIESSVTQH 220 +IE+ Q Sbjct: 123 ARRIETGWRQG 133 >gi|297627443|ref|YP_003689206.1| polar amino acid ABC transporter, inner membrane component [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296923208|emb|CBL57802.1| polar amino acid ABC transporter, inner membrane component [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 326 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 115/245 (46%), Gaps = 33/245 (13%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P ++ I T+ I+ +I + +G +AV+R+ + ++ + W FR P V Sbjct: 67 PPIIEGLIKGTILGTVIAMIIGVGLGVLLAVLRLS-KNPVLKYASAGFTWFFRAIPRYVL 125 Query: 74 LFVIFYGL----P--HIGIVFDSFVAIIISLTLNF------------------------- 102 L ++ GL P IGI F ++ + L + Sbjct: 126 LTILGVGLIYLYPTIDIGIPFGQQISHWLGLGWDMTWWHIDMRNVSSGIGIGALGLGLSE 185 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 SAY++EI R+ I+S+ GQ +A+ A+G++ ++T+R I+LPQ + P +EFI+++K Sbjct: 186 SAYMAEIARAGIVSVDDGQTEAAEALGMSHRKTMRRIVLPQAMRVIVPPTGNEFIAMIKD 245 Query: 163 TSVASTITIP-EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TS+ + I + E+F A I + TY+ + Y YL++ S +Q +E + Sbjct: 246 TSLLAAIPVGMELFYQATIIANRTYKVMSAYVAATIWYLVVCSVLMFLQSLLEKRFGRGF 305 Query: 222 YSVDK 226 + D Sbjct: 306 SNGDD 310 >gi|289624564|ref|ZP_06457518.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330866226|gb|EGH00935.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 225 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 101/194 (52%), Gaps = 13/194 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 +TL +A S +++++G +R+ I+ + Y + RG P LV + +IFYG Sbjct: 15 LTLQLALSSMALAIVLGLIGVALRLS-PVRWIAWLGDLYSTVIRGIPDLVLILLIFYGGQ 73 Query: 81 ------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P +G I D +A I +L F AY+SE R + ++IPKGQ +A A GL Sbjct: 74 DLLNRVAPLLGFDDYIDLDPLLAGICTLGFIFGAYLSETFRGAFMAIPKGQAEAGMAYGL 133 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + + I++PQ I + ++ ++ + K+T++ S + + ++ A++ T +P Sbjct: 134 SSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATREPFT 193 Query: 191 IYCELAFVYLILTS 204 + +A +YL++TS Sbjct: 194 FFLAVAAMYLVITS 207 >gi|85059071|ref|YP_454773.1| arginine transporter permease subunit ArtM [Sodalis glossinidius str. 'morsitans'] gi|84779591|dbj|BAE74368.1| arginine ABC transporter permease component [Sodalis glossinidius str. 'morsitans'] Length = 222 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 92/164 (56%), Gaps = 12/164 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIG----------IVFDSFVAIIISLTLNFSAYISEII 110 Y+ +F GTPLLVQ+F+I+YG ++ ++ +++L LN +AY +++ Sbjct: 51 YITLFTGTPLLVQIFLIYYGPGQFAGLHAIPWLWQLLSQPWLCAMVALALNSAAYSTQLF 110 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 ++ +IP GQW + A+G++R Q +R +++P I + S+E + + KSTS+A TIT Sbjct: 111 AGAMRAIPDGQWQSCTALGMSRVQALR-LLMPFAIKRALSSYSNEVVLVFKSTSLAYTIT 169 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + ++ +Q + TY ++++ +YL + ++ +E Sbjct: 170 LMDVMGQSQLLYGRTYD-VMVFGAAGIIYLCVNGVLTLLMRSLE 212 >gi|227529142|ref|ZP_03959191.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] gi|227350986|gb|EEJ41277.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] Length = 232 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 109/204 (53%), Gaps = 20/204 (9%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY---V 62 N DSF Q+L A P+ I +++ IIG +A++ + + I ++ F V Sbjct: 4 LNFAKDSFNQILAAT-----PLTLIVALVATIIGLGLAILVVIAREKRIPVLSQFLAILV 58 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLT---LNFSAYISEII 110 RGTP+LVQL+V++YGLP + ++ + + AIII+ + LN A +SE I Sbjct: 59 SFIRGTPILVQLYVVYYGLPQLLVLMNEWGWNTNPNGLPAIIIAFSAYGLNAMANLSESI 118 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R++ S+ GQ++A+ +IG+T + + I++PQ I ++ F+ ++K T++ I Sbjct: 119 RAAYHSVDFGQYEAALSIGMTPFRAMTQIVIPQLIINLIPNFTNIFLDLIKDTALIYNIG 178 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCE 194 + EI A + S ++ L Y + Sbjct: 179 LVEIMGQANIVSSIGFKYLETYTD 202 >gi|172064622|ref|YP_001812272.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171998107|gb|ACB69023.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 246 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 14/160 (8%) Query: 60 FYVWIFRGTPLLVQLFVIFYGL--------------PHIGIVFDSFVAIIISLTLNFSAY 105 Y W RGTPLL QL +++YG P + ++ D F +I+LT+N AY Sbjct: 55 LYTWFIRGTPLLAQLMLVYYGFGQFQWVQDAWQRGNPLLSVLRDPFGCAMIALTVNTCAY 114 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 EI+ +I + G+ +A+ A G++R R I+LP + S+E I +L TS+ Sbjct: 115 TVEILAGAIRATAYGEIEAAQAYGMSRATAWRRIVLPSALRRFLPAYSNEVILMLHGTSL 174 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSF 205 S IT+ ++ A+ + + Y P + + VY LT Sbjct: 175 VSAITLIDLTGAARDVYANYYAPFEAFISVGTVYFALTGL 214 >gi|261838495|gb|ACX98261.1| glutamine ABC transporter, permease protein [Helicobacter pylori 51] Length = 217 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 100/187 (53%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + + S P L + +TL I+ ++SL++GF A+I ++F IS I++ Sbjct: 1 MALDW-DFMFHSIPMFL-KGLELTLYISFFGILLSLLVGFLCAII-LYFKTRFISPIIYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QKESALSLGFGPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALADIMFVAKD 175 Query: 181 IVSTTYQ 187 + Y+ Sbjct: 176 FIGIYYK 182 >gi|167565680|ref|ZP_02358596.1| histidine transport system permease protein [Burkholderia oklahomensis EO147] Length = 237 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 95/182 (52%), Gaps = 13/182 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+S+ +GF +AV I + ++S + Y ++FRGTPL VQL + + G+ + +V D Sbjct: 31 VVSIGLGFCLAVPLAIARASRNRLLSRAVWLYTYVFRGTPLYVQLLLCYTGIYSLNVVHD 90 Query: 90 ----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + +++ TLN AY +EI +I S G+ +A A G++R + + Sbjct: 91 HAWLDSFFRSAMNCTLLAFTLNECAYATEIFAGAIKSTSPGEIEAGLAYGMSRFKLYTRV 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILP + + S+E I +L +T++A T T+P+I + + + S TY Y A +Y Sbjct: 151 ILPSALRRALPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYASFQAYGIAAVLY 210 Query: 200 LI 201 + Sbjct: 211 AV 212 >gi|134278113|ref|ZP_01764827.1| ABC amino acid transporter, inner membrane subunit [Burkholderia pseudomallei 305] gi|134249897|gb|EBA49977.1| ABC amino acid transporter, inner membrane subunit [Burkholderia pseudomallei 305] Length = 255 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 79/127 (62%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TP LVQLF +F+GLP +G+ + A ++++T+N AY EI+R+ I SIP+G Sbjct: 60 YVELIRNTPFLVQLFFVFFGLPSLGVHINEMQAAVLAMTVNLGAYALEIVRAGIDSIPRG 119 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q A+ A+GL +Q R+++LPQ + L + + ++ ++V S I++P++ A Sbjct: 120 QIQAAMALGLQGRQVFRYVVLPQALANVFPALLGQVLIVMLGSAVVSQISVPDLTYAANF 179 Query: 181 IVSTTYQ 187 I S ++ Sbjct: 180 IQSRNFR 186 >gi|123442311|ref|YP_001006290.1| amino acid transport system permease protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089272|emb|CAL12119.1| amino acid transport system permease protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 230 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/208 (23%), Positives = 113/208 (54%), Gaps = 13/208 (6%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 ++ D P LL ++L + +S ++L +G AVI++F + I Y + RG Sbjct: 1 MVADYLP-LLAQGAGLSLCVMLLSLAVALTLGLINAVIKLF-GPRWLRWISTGYTTLVRG 58 Query: 68 TPLLVQLFVIFYGLPHI-----------GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 P LV + ++F+G + + F++FV+ ++++ + F AY +E R + + Sbjct: 59 IPELVIMLLLFFGGEMLVNGFLGLLGLGPVRFNTFVSGVLAIGIVFGAYYTETFRGAFQT 118 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + +GQ +A+ A G+ Q R I+LPQ ++ + +++ ++ ++K++++ S + + ++ Sbjct: 119 VDRGQLEAAVAYGMRPGQVFRRIMLPQMLSFAIPGINNNWLGLMKASALISILGLEDMVW 178 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTS 204 A++ T +P + Y +A +Y+++T+ Sbjct: 179 LAEQAGRATQKPFLFYFLVAMIYMVITA 206 >gi|308183273|ref|YP_003927400.1| glutamine ABC transporter, permease protein [Helicobacter pylori PeCan4] gi|308065458|gb|ADO07350.1| glutamine ABC transporter, permease protein [Helicobacter pylori PeCan4] Length = 217 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 101/187 (54%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + + S P L + +TL I+ ++SL++GF A+I ++F IS I++ Sbjct: 1 MALDW-DFMFHSIPAFL-KGLELTLYISFFGILLSLLVGFLCAII-LYFKTRFISPIVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QKESALSLGFSPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQ 187 + Y+ Sbjct: 176 FIGIYYK 182 >gi|330501773|ref|YP_004378642.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas mendocina NK-01] gi|328916059|gb|AEB56890.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina NK-01] Length = 245 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 11/213 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ A +F I+L+ G + V R + +L F V +FR PLLVQ+F+ ++ LP Sbjct: 32 TVATAIGAFTIALLFGSLVGVARTSPLAWMRALGTGF-VELFRNIPLLVQMFLWYFVLPE 90 Query: 84 I-----GIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 + G F +F +I L +A ++E++R+ + S+ +GQ A A+GLT Sbjct: 91 LLPTDLGRWFKQLPNAAFYTAVICLGCYHAARMAEVVRAGLESLSRGQRMAGLAMGLTLV 150 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 QT R+++LP ++SEF+S K+TSVA I + E+ +A+ + ++Q + Sbjct: 151 QTYRYVLLPMAYRIVVPAITSEFLSCTKNTSVALAIGLMELTGSARAMQENSFQTFEAFT 210 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 +YL+L +E Y + K Sbjct: 211 AATTLYLVLNLIIVFAMRAVERKAAVPGYGLRK 243 >gi|153814547|ref|ZP_01967215.1| hypothetical protein RUMTOR_00761 [Ruminococcus torques ATCC 27756] gi|317500589|ref|ZP_07958810.1| hypothetical protein HMPREF1026_00753 [Lachnospiraceae bacterium 8_1_57FAA] gi|331089310|ref|ZP_08338211.1| hypothetical protein HMPREF1025_01794 [Lachnospiraceae bacterium 3_1_46FAA] gi|145848041|gb|EDK24959.1| hypothetical protein RUMTOR_00761 [Ruminococcus torques ATCC 27756] gi|316898022|gb|EFV20072.1| hypothetical protein HMPREF1026_00753 [Lachnospiraceae bacterium 8_1_57FAA] gi|330405491|gb|EGG85023.1| hypothetical protein HMPREF1025_01794 [Lachnospiraceae bacterium 3_1_46FAA] Length = 228 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 9/132 (6%) Query: 62 VWIFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 VWI RGTPL++QL +I++ P + G F+A ++ N++ Y SEI R Sbjct: 59 VWIIRGTPLMIQLLIIYF-FPGLVMGNNIWGGGEAGRFLAAAVAFIFNYACYFSEIYRGG 117 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I +P GQ +A +G+TR Q + L Q + P+S+E I+++K TS+A I + E Sbjct: 118 IQGVPHGQEEAGLVLGMTRSQIFFKVTLLQMVKRIVPPMSNEIITLVKDTSLARIIALQE 177 Query: 174 IFQTAQRIVSTT 185 I Q + + Sbjct: 178 IIWAGQAFLKGS 189 >gi|290473277|ref|YP_003466143.1| putative glutamate/aspartate ABC transporter membrane protein [Xenorhabdus bovienii SS-2004] gi|289172576|emb|CBJ79345.1| putative glutamate/aspartate transport protein (ABC superfamily, membrane) [Xenorhabdus bovienii SS-2004] Length = 245 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 110/206 (53%), Gaps = 29/206 (14%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS---LIMHFYVW 63 +L+ + + L+ ++TL ++ + + S ++GF I R D+ I ++ Y Sbjct: 9 HLLAPEYLRWLWQGFLITLWLSVCTIISSTLLGFMITAAR----DSQIKPLRWLVTAYTT 64 Query: 64 IFRGTPLLVQLFVIFYG----LPHIGIVFDS------------------FVAIIISLTLN 101 +FR TPLLVQLF ++ LP +++ + F+A I LTL Sbjct: 65 VFRNTPLLVQLFFWYFASGQILPQAAMIWLNTSHEIPIAGLTLAWPSFEFLAGFIGLTLY 124 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 + +++E +R+ I I +GQ A++A+GLT Q +R+++LPQ + + PL ++++I+K Sbjct: 125 SAPFVAEELRAGIQGIGRGQKYAAHALGLTDWQAMRYVVLPQALKIAMPPLLGQYMNIVK 184 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQ 187 ++S+ I + E+ ++++ + + Q Sbjct: 185 NSSLTMAIGVAELSYASRQVETQSLQ 210 >gi|323339948|ref|ZP_08080215.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ruminis ATCC 25644] gi|323092590|gb|EFZ35195.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ruminis ATCC 25644] Length = 482 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 52/177 (29%), Positives = 96/177 (54%), Gaps = 2/177 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + IS + + + G I + + + I + ++IFRG PL+V I+ G+P Sbjct: 287 TIKLTVISIICATLFGILIGFLGVV-PNKIAQGVSGTVIYIFRGLPLIVLALFIYNGIPS 345 Query: 84 I-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + G +FVA +I+L LN AYI+ ++ I ++ GQ +A+ ++GL + +R ++LP Sbjct: 346 LTGSKIPAFVAGVITLMLNEGAYIAAFVKGGIEAVDSGQMEAARSLGLPFGKAMRKVVLP 405 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 Q I ++FI LK TS+ S I + E+ QT + I++ + ++ +A +Y Sbjct: 406 QGIKIMIPSFINQFIITLKDTSILSVIGLLELTQTGKIIIARNLEGFRVWTIVAVIY 462 >gi|221195848|ref|ZP_03568901.1| ABC transporter, permease protein [Atopobium rimae ATCC 49626] gi|221184322|gb|EEE16716.1| ABC transporter, permease protein [Atopobium rimae ATCC 49626] Length = 224 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 57/213 (26%), Positives = 109/213 (51%), Gaps = 9/213 (4%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P+LL + VT+ I +S +S+ +G F+ ++ S +I I+ Y+ + R P LV Sbjct: 14 PRLL-GGLWVTVEIGFLSVALSIPLGVFVGLLMTSRSK-VIRAILRMYLEVVRVMPQLVL 71 Query: 74 LFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 L+V+F+G G D F A + T +A + +++R ++ SIP Q+D+++ +GL+R Sbjct: 72 LYVVFFGTAAWFGANLDGFEASVAVFTFWGAAEMGDLVRGALTSIPSSQYDSAFVLGLSR 131 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS------TTY 186 +QT ++LPQ I P + ++K+T++ + I + E+ + +I T Sbjct: 132 RQTFLRVVLPQAIRRLLPPAINLITRMIKTTALCNLIGVVELIRVGSQITDFYRFKFPTT 191 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 L IY + F+Y ++ ++E S + Sbjct: 192 GALWIYGAIFFLYFAACFPLSLLARRLERSAQK 224 >gi|154483452|ref|ZP_02025900.1| hypothetical protein EUBVEN_01155 [Eubacterium ventriosum ATCC 27560] gi|149735704|gb|EDM51590.1| hypothetical protein EUBVEN_01155 [Eubacterium ventriosum ATCC 27560] Length = 225 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 90/147 (61%), Gaps = 8/147 (5%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL- 81 VTL IA I+ + S+I+GF + +I + + ++ LI Y+ I R P LV LF++++G Sbjct: 24 VTLRIALIAMIFSIILGFILGMI-MTSKNKVVKLICRIYLEIVRIMPQLVLLFLVYFGAA 82 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 H+G+ +A +I T +A + +++RS++ISIPK Q+++ Y +GLT+ Q +II Sbjct: 83 KHLGMNMPGELAAVIVFTFWGTAEMGDLVRSALISIPKHQYESGYGLGLTKLQVFIYIIF 142 Query: 142 PQTITT---SAVPLSSEFISILKSTSV 165 PQTI SA+ L + I K+TS+ Sbjct: 143 PQTIRRLLPSAINLLTRMI---KTTSL 166 >gi|271963750|ref|YP_003337946.1| binding-protein-dependent transporter inner membrane component [Streptosporangium roseum DSM 43021] gi|270506925|gb|ACZ85203.1| binding-protein-dependent transport systems inner membrane component [Streptosporangium roseum DSM 43021] Length = 222 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 113/206 (54%), Gaps = 20/206 (9%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D FP +L A +T+ + S +++LI+G +A +R+ ++ I YV I R TPL Sbjct: 6 DEFPVIL-GAFWLTIRLTLASGLLALILGTILAGMRVS-PLPVLRGIGTAYVNIVRNTPL 63 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNF------------SAYISEIIRSSIISIP 118 L ++F GL +G+V D V+ SL+ N+ +A++ E IR+ I ++P Sbjct: 64 --TLVIVFCGL-GLGLVLD--VSFSTSLSTNYLWLSIIGLSGYTAAFVCEAIRAGINTVP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ +A+ AIGLT Q +R I+LPQ + PL S I+++K+T++A+ I + E T Sbjct: 119 LGQAEAARAIGLTFFQNLRLIVLPQALRAVIAPLGSVLIALIKNTTIAAAIGVGEASLTM 178 Query: 179 QRIVSTTYQPLI-IYCELAFVYLILT 203 + + + ++ I+ A +LILT Sbjct: 179 KTLFESHGDAVVPIFFGFALGFLILT 204 >gi|324997391|ref|ZP_08118503.1| amino acid ABC transporter membrane protein [Pseudonocardia sp. P1] Length = 215 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 109/199 (54%), Gaps = 2/199 (1%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + +V T+ + I+ + SL++G +A +R+ + S YV + R TPL + LF Sbjct: 12 WRGLVGTVGLFVIAAIGSLLLGTLVAGLRVSPVPALRSF-GSAYVTVMRNTPLTLVLFFF 70 Query: 78 FYGLPHIGIVFDSFVAI-IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 + P + +V F A+ I LTL +A++ E++RS I ++P GQ +A+ A+G T QT+ Sbjct: 71 AFAYPRLELVELPFFALACIGLTLYTAAFVCEVVRSGINTVPVGQAEAARALGFTFTQTL 130 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 ++LPQ + P+++ I++LK+T++AS + + + Y L+ +A Sbjct: 131 GQVVLPQAVRAVVPPMTNVQIALLKNTTIASGFAVFNMGNVYSVLSERGYNVLVGLLWVA 190 Query: 197 FVYLILTSFCYIIQIKIES 215 ++IL + ++Q ++++ Sbjct: 191 LFFIILVAPLTLLQRRLDA 209 >gi|254430534|ref|ZP_05044237.1| ABC-type permease for basic amino acids and glutamine [Cyanobium sp. PCC 7001] gi|197624987|gb|EDY37546.1| ABC-type permease for basic amino acids and glutamine [Cyanobium sp. PCC 7001] Length = 331 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/232 (23%), Positives = 110/232 (47%), Gaps = 45/232 (19%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L A + TL + + ++G +A + F S+ ++ ++ YV + R PLL+QL Sbjct: 81 RALLAGLANTLRAVVCGLIGATLLGT-MAGMANFSSNGLLRGLVRGYVEVVRNIPLLLQL 139 Query: 75 ----FVIFYGLPHIGIVFD----------------------------------------S 90 FV+F LP+ Sbjct: 140 VFWYFVVFLALPNGAAALQLPGLTLAKSGLYLAGFGPGWEWAGPTLVNGVWQAPLRLSVE 199 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 F A++ L + AYI+E++R+ I ++P+GQW+A+ ++GL ++RH++LPQ + Sbjct: 200 FGALLCGLVVYSGAYIAEVVRAGIAAVPEGQWEAASSLGLGWLASVRHVVLPQALRVIVP 259 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 L++++IS+ K++S+A + P+++ A+ ++ T + + + L YL+L Sbjct: 260 GLNTQYISLAKNSSLAVAVGYPDLYAVAETTLNQTGRAVEMVILLLAAYLVL 311 >gi|271963749|ref|YP_003337945.1| amino acid ABC transporter permease [Streptosporangium roseum DSM 43021] gi|270506924|gb|ACZ85202.1| ABC-type amino acid transport system permease component-like protein [Streptosporangium roseum DSM 43021] Length = 312 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 74/124 (59%), Gaps = 1/124 (0%) Query: 65 FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FR PLL+ +F + YG + G+ F+A++ L L + ++EI+R+ I+SIP+GQ + Sbjct: 129 FRAIPLLIMIFAVMYGGSAVFGLTVTPFMAVVTGLVLYNGSVLAEIVRAGILSIPRGQSE 188 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ AIGL + Q +R I+LPQ +T + ++ + +LK T++ ++ ++ R++ Sbjct: 189 AALAIGLRKGQVMRMILLPQGVTAMMPAIVAQLVVLLKDTALGFIVSFEDLLNAGARVLP 248 Query: 184 TTYQ 187 + + Sbjct: 249 SNFN 252 >gi|15597399|ref|NP_250893.1| amino acid permease [Pseudomonas aeruginosa PAO1] gi|107101630|ref|ZP_01365548.1| hypothetical protein PaerPA_01002674 [Pseudomonas aeruginosa PACS2] gi|116050136|ref|YP_791047.1| putative amino acid permease [Pseudomonas aeruginosa UCBPP-PA14] gi|218891844|ref|YP_002440711.1| putative amino acid permease [Pseudomonas aeruginosa LESB58] gi|254235229|ref|ZP_04928552.1| hypothetical protein PACG_01120 [Pseudomonas aeruginosa C3719] gi|254240625|ref|ZP_04933947.1| hypothetical protein PA2G_01284 [Pseudomonas aeruginosa 2192] gi|313110963|ref|ZP_07796803.1| putative amino acid permease [Pseudomonas aeruginosa 39016] gi|9948225|gb|AAG05591.1|AE004646_12 probable amino acid permease [Pseudomonas aeruginosa PAO1] gi|115585357|gb|ABJ11372.1| putative amino acid permease [Pseudomonas aeruginosa UCBPP-PA14] gi|126167160|gb|EAZ52671.1| hypothetical protein PACG_01120 [Pseudomonas aeruginosa C3719] gi|126194003|gb|EAZ58066.1| hypothetical protein PA2G_01284 [Pseudomonas aeruginosa 2192] gi|218772070|emb|CAW27849.1| probable amino acid permease [Pseudomonas aeruginosa LESB58] gi|310883305|gb|EFQ41899.1| putative amino acid permease [Pseudomonas aeruginosa 39016] Length = 238 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 19/168 (11%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP--------------H 83 IG +A+ R+ ++S Y+ +FR TPLLVQLF ++G+P H Sbjct: 35 IGAPLAIARLS-RRRLLSWPARAYLALFRNTPLLVQLFFWYFGVPALLPEALVSWLNTPH 93 Query: 84 IGIVFD----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + D F+A LTL SA+++E R+ I S+ Q A A+GLT++Q R + Sbjct: 94 ETPLLDWPSFEFLAGAWGLTLYTSAFVAEEFRAGIASVRPEQRAAGLALGLTQRQVWRVV 153 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +LPQ + T+ PL ++++ LK++S+A I + E+ ++++ + T++ Sbjct: 154 VLPQALRTALPPLLGQYMNALKNSSLAMAIGLAELSYASRQVETETFK 201 >gi|218511054|ref|ZP_03508932.1| probable amino acid ABC transporter, permease protein [Rhizobium etli Brasil 5] Length = 231 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 65/92 (70%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +Y+ +F+GTPLL+QLF+ F+GL GI +++A ++L L +A+++EI R + S+ + Sbjct: 55 YYIELFQGTPLLMQLFIAFFGLGLFGIDVPAWLAAGMALILWTAAFLAEIWRGCVESVAR 114 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVP 151 GQW+AS ++G+ R Q +R++ILPQ + + P Sbjct: 115 GQWEASASLGMGRLQQMRYVILPQALRVAIPP 146 >gi|161521798|ref|YP_001585225.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189352040|ref|YP_001947667.1| polar amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] gi|160345848|gb|ABX18933.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189336062|dbj|BAG45131.1| polar amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 221 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 103/188 (54%), Gaps = 2/188 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + +TL ++ ++GF ++++R+ S + + YV FRGTPLL+QLF Sbjct: 15 LVKGLGLTLAYTATCAIVGSLLGFVLSLLRMSPSRWLRGPVAA-YVEFFRGTPLLIQLFW 73 Query: 77 IFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +F+ P + + +++++ISLTL +A SE R S+ SI Q DA A+ L+ Sbjct: 74 VFFCFPVVLRLPIPPYLSVLISLTLYMAAITSETFRGSLKSIAGEQHDACIALSLSPHVK 133 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 I ++I PQ + + PL S +S+ K +++ S++ I ++ Q + ++T +P+ + Sbjct: 134 IVYVIFPQALLRAIPPLLSNVVSLFKESALISSVGIADLMFVGQNVSNSTARPVEFLTTV 193 Query: 196 AFVYLILT 203 A +Y ++ Sbjct: 194 AVIYFLVA 201 >gi|291298120|ref|YP_003509398.1| polar amino acid ABC transporter inner membrane subunit [Stackebrandtia nassauensis DSM 44728] gi|290567340|gb|ADD40305.1| polar amino acid ABC transporter, inner membrane subunit [Stackebrandtia nassauensis DSM 44728] Length = 285 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 99/177 (55%), Gaps = 7/177 (3%) Query: 1 MKYEWFN--LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 + ++FN LI SFP+L A+ T+ +V+ +G IAV+R+ S + I Sbjct: 57 LSEKFFNAELIERSFPELFTVALANTVIYTASGYVVGFALGILIAVMRLS-SAAVNRWIA 115 Query: 59 HFYVWIFRGTP-LLVQLFVIFY---GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 ++ IFRG P LL+ F+ F+ P++ I ++ + + L L +AY++E R+ I Sbjct: 116 TGFIEIFRGLPALLILTFLAFFWPVAFPNLIIPGGNYGTVALGLGLCSAAYMAETFRAGI 175 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++PKGQ +A+ ++G++ + + IILPQ + PL++E I + K +S+ T+ I Sbjct: 176 QAVPKGQMEAARSLGMSHTRAMVTIILPQAVRIVIPPLTNELILLTKDSSLVLTVGI 232 >gi|238897255|ref|YP_002922932.1| polar amino acid ABC transporter permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465010|gb|ACQ66784.1| polar amino acid ABC transporter permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 225 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 111/221 (50%), Gaps = 6/221 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ ++P +TL I+ ++ + S ++G I I + S I S I+ + Sbjct: 9 NWRYLLCGAYPDGPIGGAALTLWISILAGIASSVLGV-IWGIGLALSRGICSGILSAVLG 67 Query: 64 IFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FR P+++ +F I++ LP G ++ L L SAY++ ++S I+++ +GQW Sbjct: 68 FFRAIPVIMLIFWIYFLLPIAFGWDIPKITTVVCGLALITSAYLAHAVKSGIVAVGQGQW 127 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRI 181 A ++GL Q +R IILPQ + +++IS++K TS+A + + E+ F Q Sbjct: 128 SAGLSLGLNSWQILRFIILPQVLRVMFPSFVNQWISLIKDTSLAYIVGVNELTFLATQVN 187 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 T + ++ + +Y IL C+I+ + + + TY Sbjct: 188 NRTMVHSMEVFLFVGLIYFIL---CFILDFSVNYFLKKDTY 225 >gi|186476548|ref|YP_001858018.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phymatum STM815] gi|184193007|gb|ACC70972.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 237 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 103/196 (52%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S I + +AV R+ +S + Y ++FRGTPL VQL +I+ Sbjct: 21 SGLAVTLWLLVASIGIGFVASIPLAVARVS-KKRWLSTPVRLYTYVFRGTPLYVQLLLIY 79 Query: 79 YGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D+F I++ LN AY +EI +I + P G+ +A+ A Sbjct: 80 TGMYSLEFVRSHALLDAFFRSGFHCAILAFALNTCAYTTEIFAGAIRATPHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++ R I++P + A+PL S+E I +L +T+VA T T+P++ + A+ S TY+ Sbjct: 140 GMSWLTMYRRIVIPSALR-RALPLYSNEVILMLHATTVAFTATVPDVLKVARDANSATYR 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL ++ Sbjct: 199 SFEAFGLAALIYLAVS 214 >gi|319407361|emb|CBI81008.1| ABC transporter, permease protein [Bartonella sp. 1-1C] Length = 234 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 107/194 (55%), Gaps = 13/194 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL +A S ++ L +G A I I + I+ I + +FRG P ++ LF ++YGL Sbjct: 25 ITLSLALCSIILGLPLGLMNATI-IQSNIRILKAIATLFSSVFRGLPEILTLFFVYYGLQ 83 Query: 83 H----------IGIVF--DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + I I+F ++F+A +++ ++ F+A+ E+ ++ K Q++A+ +GL Sbjct: 84 NCIQAIFDFLNIDIIFSINAFIAGVLAFSMVFAAFSCEVWLAAFKMFDKSQYEAAQVLGL 143 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 +R T I+ PQ + + LS+ ++++LK TS+ STI++ ++ + + T +P++ Sbjct: 144 SRSTTFFRIVFPQLLHNALPGLSNNWLTLLKDTSLVSTISLLDLMRQTNLAATATNEPIL 203 Query: 191 IYCELAFVYLILTS 204 Y +YL+ ++ Sbjct: 204 FYLVACLLYLLFSA 217 >gi|307352564|ref|YP_003893615.1| polar amino acid ABC transporter inner membrane subunit [Methanoplanus petrolearius DSM 11571] gi|307155797|gb|ADN35177.1| polar amino acid ABC transporter, inner membrane subunit [Methanoplanus petrolearius DSM 11571] Length = 222 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 104/173 (60%), Gaps = 3/173 (1%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P LL +VVT+ + +S L+ G +A+ R + S + + +G PLL+ Sbjct: 13 PALL-TGLVVTVQLIVVSAPFGLLAGIGVAIGRTY-GGRCTSFLCKAFAMFVKGCPLLLL 70 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LF++++ LP IGI F +F A +I + +AY SE IR +I S+ +GQ A+ ++G+T+ Sbjct: 71 LFILYFTLPSIGITFTAFEASVIGFIMCNAAYNSEYIRGAIKSVKEGQIIAARSLGMTKY 130 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 Q+I +I+LPQ + + LS+EFI ++K +S+A +T+ E+ A ++++T Y Sbjct: 131 QSIFYIVLPQALRRAIPGLSNEFIYLIKYSSLAFMLTLVEL-TGAGKLIATKY 182 >gi|154497089|ref|ZP_02035785.1| hypothetical protein BACCAP_01382 [Bacteroides capillosus ATCC 29799] gi|150273488|gb|EDN00616.1| hypothetical protein BACCAP_01382 [Bacteroides capillosus ATCC 29799] Length = 182 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/152 (36%), Positives = 84/152 (55%), Gaps = 7/152 (4%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ I RG P++VQL I Y + + + + + II+ LN SAY++EI RS I ++ G Sbjct: 21 YIDIIRGIPVVVQLL-IMYNVVLLNVTDNKTLVAIIAFGLNSSAYMAEIYRSGINAVDPG 79 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A ++GL+R QT+ HII PQ I +SEFI ++K T+V I + ++ + Sbjct: 80 QMEAGRSLGLSRAQTMWHIIFPQAIKNCLPTYTSEFIVLVKETAVVGYIALVDLTKVYSS 139 Query: 181 IVSTTYQ---PLIIYCELAFVYLILTSFCYII 209 + S TY PL I +A Y +T II Sbjct: 140 VQSLTYDAAAPLFI---IAVAYFAITKTLSII 168 >gi|134098325|ref|YP_001103986.1| glutamate permease [Saccharopolyspora erythraea NRRL 2338] gi|291004255|ref|ZP_06562228.1| glutamate permease [Saccharopolyspora erythraea NRRL 2338] gi|133910948|emb|CAM01061.1| glutamate permease [Saccharopolyspora erythraea NRRL 2338] Length = 291 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 104/201 (51%), Gaps = 25/201 (12%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K+EW LLY I V L A + V + G AV+ + F + + Sbjct: 49 KWEW----------LLYEQIQVELVRALGNTVGAFATG---AVLALAFGAVFALGRLSDH 95 Query: 62 VWI----------FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 W+ FR PL++ +F ++Y P +G+ F + ++++ LTL + ++E+ R Sbjct: 96 AWLRVPCAGIVEFFRAIPLVILIFFLYYAAPGLGVNFGQYWSVVLGLTLYNGSVLAEVFR 155 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + + ++P+GQ +A+Y+IG+ + Q +R ++LPQ++ + S+ + +LK +++ IT Sbjct: 156 AGVNALPRGQTEAAYSIGMRKNQVMRFVVLPQSVRMMLPAIISQLVVLLKDSALGFLITY 215 Query: 172 PEIFQTAQRI--VSTTYQPLI 190 E+ A+ + V T +P+I Sbjct: 216 QELLYYARYLGGVPTLDRPII 236 >gi|49082028|gb|AAT50414.1| PA2203 [synthetic construct] Length = 239 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 19/168 (11%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP--------------H 83 IG +A+ R+ ++S Y+ +FR TPLLVQLF ++G+P H Sbjct: 35 IGAPLAIARLS-RRRLLSWPARAYLALFRNTPLLVQLFFWYFGVPALLPEALVSWLNTPH 93 Query: 84 IGIVFD----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + D F+A LTL SA+++E R+ I S+ Q A A+GLT++Q R + Sbjct: 94 ETPLLDWPSFEFLAGAWGLTLYTSAFVAEEFRAGIASVRPEQRAAGLALGLTQRQVWRVV 153 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +LPQ + T+ PL ++++ LK++S+A I + E+ ++++ + T++ Sbjct: 154 VLPQALRTALPPLLGQYMNALKNSSLAMAIGLAELSYASRQVETETFK 201 >gi|53716814|ref|YP_105872.1| histidine ABC transporter, permease protein [Burkholderia mallei ATCC 23344] gi|53722005|ref|YP_110990.1| histidine transport system permease protein [Burkholderia pseudomallei K96243] gi|67639786|ref|ZP_00438620.1| histidine transport system permease protein HisM [Burkholderia mallei GB8 horse 4] gi|121596555|ref|YP_989820.1| histidine ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|124382188|ref|YP_001024298.1| histidine ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126444820|ref|YP_001062438.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia pseudomallei 668] gi|126447121|ref|YP_001078282.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia mallei NCTC 10247] gi|126457790|ref|YP_001075391.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia pseudomallei 1106a] gi|134279032|ref|ZP_01765745.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 305] gi|167002835|ref|ZP_02268625.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei PRL-20] gi|167723385|ref|ZP_02406621.1| histidine transport system permease protein [Burkholderia pseudomallei DM98] gi|167742356|ref|ZP_02415130.1| histidine transport system permease protein [Burkholderia pseudomallei 14] gi|167819527|ref|ZP_02451207.1| histidine transport system permease protein [Burkholderia pseudomallei 91] gi|167827900|ref|ZP_02459371.1| histidine transport system permease protein [Burkholderia pseudomallei 9] gi|167849367|ref|ZP_02474875.1| histidine transport system permease protein [Burkholderia pseudomallei B7210] gi|167906310|ref|ZP_02493515.1| histidine transport system permease protein [Burkholderia pseudomallei NCTC 13177] gi|226197677|ref|ZP_03793252.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei Pakistan 9] gi|237508153|ref|ZP_04520868.1| histidine ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|242313957|ref|ZP_04812974.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 1106b] gi|254174148|ref|ZP_04880810.1| histidine ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|254183462|ref|ZP_04890054.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 1655] gi|254190090|ref|ZP_04896599.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei Pasteur 52237] gi|254193255|ref|ZP_04899690.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei S13] gi|254200692|ref|ZP_04907057.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei FMH] gi|254204667|ref|ZP_04911020.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei JHU] gi|254263806|ref|ZP_04954671.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 1710a] gi|254300363|ref|ZP_04967809.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 406e] gi|254356909|ref|ZP_04973184.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei 2002721280] gi|52212419|emb|CAH38444.1| histidine transport system permease protein [Burkholderia pseudomallei K96243] gi|52422784|gb|AAU46354.1| histidine ABC transporter, permease protein [Burkholderia mallei ATCC 23344] gi|121224353|gb|ABM47884.1| histidine ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|124290208|gb|ABM99477.1| histidine ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126224311|gb|ABN87816.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 668] gi|126231558|gb|ABN94971.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 1106a] gi|126239975|gb|ABO03087.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei NCTC 10247] gi|134249451|gb|EBA49532.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 305] gi|147748304|gb|EDK55379.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei FMH] gi|147754253|gb|EDK61317.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei JHU] gi|148025936|gb|EDK84059.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei 2002721280] gi|157810289|gb|EDO87459.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 406e] gi|157937767|gb|EDO93437.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei Pasteur 52237] gi|160695194|gb|EDP85164.1| histidine ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|169650009|gb|EDS82702.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei S13] gi|184213995|gb|EDU11038.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 1655] gi|225930286|gb|EEH26298.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei Pakistan 9] gi|235000358|gb|EEP49782.1| histidine ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|238520390|gb|EEP83850.1| histidine transport system permease protein HisM [Burkholderia mallei GB8 horse 4] gi|242137196|gb|EES23599.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 1106b] gi|243061530|gb|EES43716.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei PRL-20] gi|254214808|gb|EET04193.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 1710a] Length = 237 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 94/182 (51%), Gaps = 13/182 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+SL +GF +AV I + +S + Y ++FRGTPL VQL + + G+ + +V D Sbjct: 31 VVSLGLGFGLAVPLAIARASRNRAVSGAVWLYTYVFRGTPLYVQLLLCYTGIYSLSVVHD 90 Query: 90 ----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + +++ TLN AY +EI +I S G+ +A A G++R + + Sbjct: 91 HAWLDSFFRSAMNCTLLAFTLNECAYATEIFAGAIKSTAPGEIEAGLAYGMSRFKLYTRV 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILP + + S+E I +L +T++A T T+P+I + + + S TY Y A +Y Sbjct: 151 ILPSALRRALPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYASFQAYGIAAALY 210 Query: 200 LI 201 + Sbjct: 211 AV 212 >gi|319778835|ref|YP_004129748.1| Histidine ABC transporter, permease protein HisQ [Taylorella equigenitalis MCE9] gi|317108859|gb|ADU91605.1| Histidine ABC transporter, permease protein HisQ [Taylorella equigenitalis MCE9] Length = 228 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/222 (25%), Positives = 111/222 (50%), Gaps = 13/222 (5%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q+L+ I T+ +A S V++ ++G AV ++F + I Y + R P LV + Sbjct: 8 QILHGTIS-TIVLALSSLVVAFLLGMLTAVAKVF-GNRFFKFIATLYTTLIRSVPDLVLM 65 Query: 75 FVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 +IF+G+ IG I + FV ++++ + A+ E R + +++PKGQ++ Sbjct: 66 LLIFFGIQILLNSITDAIGVDQIDLNPFVTGVLTIGFVYGAFFGETFRGAFLAVPKGQYE 125 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 AS A GL++ +T+ HI+ PQ + + + + ++ +LK+T++ S + + ++ Q Sbjct: 126 ASIAYGLSQHRTMWHIMFPQMMRYALPGVGNNWLIVLKATALVSILGLQDLVLVTQEAGR 185 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 T + + +YL+LT+ I +E + VD Sbjct: 186 ATQKMFLFIFVAGVIYLLLTTISNIFLYWLERRYSAGIKEVD 227 >gi|253990335|ref|YP_003041691.1| arginine permease ArtM [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781785|emb|CAQ84948.1| arginine transport system permease protein artm [Photorhabdus asymbiotica] Length = 222 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 45/147 (30%), Positives = 87/147 (59%), Gaps = 11/147 (7%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNF 102 +++ ++ Y+ +F GTPLLVQ F+++YG P I ++ + + +++L LN Sbjct: 43 VLTQLVKTYITLFTGTPLLVQFFLVYYGPGQFPSIKEYPLFWQLLSEPWFCAMVTLALNS 102 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +++ ++ +IP GQW + A+G+++ Q++R I+LP + S+E + I KS Sbjct: 103 AAYSTQLFYGAVKAIPAGQWHSCQALGMSKAQSMR-ILLPYAFKRALSSYSNEVVLIFKS 161 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPL 189 TS+ASTIT+ E+ ++ + Y + Sbjct: 162 TSLASTITLLEVMGYSRILFGRNYDAM 188 >gi|170722937|ref|YP_001750625.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169760940|gb|ACA74256.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 229 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 104/204 (50%), Gaps = 18/204 (8%) Query: 18 YAAIVV-----TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 Y A+++ TL +A S +++++G +R+ ++ + Y + RG P LV Sbjct: 5 YGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLS-PVRWLAWLGDMYSTVIRGIPDLV 63 Query: 73 QLFVIFYGL--------PHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + +IFYG P +G I + VA I +L F AY+SE R + + IPKG Sbjct: 64 LILLIFYGGQDIINRLGPLVGYDDYIDLNPLVAGIGTLGFIFGAYLSETFRGAFLGIPKG 123 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A G++ +Q I +PQ I + ++ ++ + K+T++ S + + ++ A++ Sbjct: 124 QAEAGAAYGMSNRQVFFRIQVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQ 183 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 T +P + +A +YL+LTS Sbjct: 184 AADATREPFTFFLAVAALYLVLTS 207 >gi|332284790|ref|YP_004416701.1| amino-acid ABC transporter permease y4tF [Pusillimonas sp. T7-7] gi|330428743|gb|AEC20077.1| amino-acid ABC transporter permease y4tF [Pusillimonas sp. T7-7] Length = 223 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/166 (31%), Positives = 90/166 (54%), Gaps = 6/166 (3%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIG------IVFDSFVAIIISLTLNFSAYISEIIRSS 113 F++ IFRGT LLVQLF +++ LP +G + VA ++L+LN AY +E++R + Sbjct: 52 FFIEIFRGTSLLVQLFWLYFALPLLGQAVGIDLRLPPVVAGTLALSLNIGAYGAEVVRGA 111 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++P Q +A+ A+ T +Q + I LPQ I + + LK T++ S I++ + Sbjct: 112 IQAVPPTQHEAAKALDFTPRQVLWRISLPQAIPEMMPSFGNLAVQNLKDTALVSLISLGD 171 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + A++I + T + IY L F+Y + I +E SV + Sbjct: 172 LAFRAEQIRNFTQDSVTIYTLLLFMYFGMALVLTAIMKLLERSVGR 217 >gi|296159438|ref|ZP_06842263.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295890422|gb|EFG70215.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 237 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 102/196 (52%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S I +AV R+ +S + Y ++FRGTPL VQL +I+ Sbjct: 21 SGLAVTLWLLVASVGIGFCAAIPLAVARVS-KKRWLSTPVRLYTYVFRGTPLYVQLLLIY 79 Query: 79 YGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D+F I++ LN AY +EI +I S G+ +A+ A Sbjct: 80 TGMYSLEFVRSQQLLDAFFRSGFHCAILAFALNTCAYTTEIFAGAIRSTSHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++ R I++P + A+PL S+E I +L +T+VA T T+P+I + A+ S TYQ Sbjct: 140 GMSWFTMYRRIVIPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYQ 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL+++ Sbjct: 199 SFDAFGLAALIYLVVS 214 >gi|163848772|ref|YP_001636816.1| polar amino acid ABC transporter inner membrane subunit [Chloroflexus aurantiacus J-10-fl] gi|222526722|ref|YP_002571193.1| polar amino acid ABC transporter inner membrane subunit [Chloroflexus sp. Y-400-fl] gi|163670061|gb|ABY36427.1| polar amino acid ABC transporter, inner membrane subunit [Chloroflexus aurantiacus J-10-fl] gi|222450601|gb|ACM54867.1| polar amino acid ABC transporter, inner membrane subunit [Chloroflexus sp. Y-400-fl] Length = 400 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 73/114 (64%) Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 V +SF A++I L + + +I EI+RS I+++ KGQ +A+ A+GLT QT+R +ILPQ + Sbjct: 265 VTNSFAALLIGLVIYTAVFIGEIVRSGILAVSKGQREAARALGLTPGQTMRLVILPQALR 324 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 PL+S+++++ K++S+A I P++F A I + T Q + + L YL Sbjct: 325 VIIPPLTSQYLNLTKNSSLAIAIAYPDLFYVANTINNQTGQAVPVILMLMASYL 378 >gi|325523118|gb|EGD01519.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. TJI49] Length = 185 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 104/185 (56%), Gaps = 17/185 (9%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVW 63 + ++D+ +LL +A+ TL + F S+ +G +A++ + + + + + Y+ Sbjct: 6 DFLLDTLMRLL-SAVPTTLGL----FFASMTLGGMLALVIVAMRVSPYWLPNRLARAYIL 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDS---------FVAIIISLTLNFSAYISEIIRSSI 114 +FRG+P+L+QLF+++YG+ V S ++ +I+L L + Y +EIIR + Sbjct: 61 VFRGSPILIQLFLVYYGVGQFDFVRHSLLWPVLREPYLCAVIALALCTAGYTAEIIRGGL 120 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +++P GQ +A Y+IGL+ +R II P + ++E I +KST++AS +T+ E+ Sbjct: 121 MAVPVGQIEAGYSIGLSGFALLRRIIAPIALRQCLPAYTTEAILQVKSTALASLVTVWEV 180 Query: 175 FQTAQ 179 AQ Sbjct: 181 TGVAQ 185 >gi|227823544|ref|YP_002827517.1| putative permease component of ABC transporter protein [Sinorhizobium fredii NGR234] gi|227342546|gb|ACP26764.1| putative permease component of ABC transporter protein [Sinorhizobium fredii NGR234] Length = 220 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 101/184 (54%), Gaps = 2/184 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ ++VTL + + +I +++GF +A++ I + L +V FR TP +VQ+ Sbjct: 15 LWEGLIVTLELTVAANLIGVVLGFPLALL-IMSRFAPVRLPAMLFVEFFRCTPAIVQIVW 73 Query: 77 IFYGLPHIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 FY +P + VF S I++L LN A+ +E R++I ++P+ Q DA A+GL Q Sbjct: 74 FFYCVPMLFNVFLGSMTMGILALGLNLMAFNAEAYRAAIQAVPREQLDAGIALGLNPLQR 133 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +I+LP + S L + I I + T++ + + + ++ A+ + + TY+P+ + + Sbjct: 134 TLYIVLPTAVRASIPVLLTNGIGIFQQTALVAIVAVQDLMYQAKTLATETYRPIETFTIV 193 Query: 196 AFVY 199 A VY Sbjct: 194 ALVY 197 >gi|167914635|ref|ZP_02501726.1| histidine transport system permease protein [Burkholderia pseudomallei 112] gi|217418800|ref|ZP_03450307.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 576] gi|217398104|gb|EEC38119.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 576] Length = 237 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 94/182 (51%), Gaps = 13/182 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+SL +GF +AV I + +S + Y ++FRGTPL VQL + + G+ + +V D Sbjct: 31 VVSLGLGFGLAVPLAIARASRNRTVSGAVWLYTYVFRGTPLYVQLLLCYTGIYSLSVVHD 90 Query: 90 ----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + +++ TLN AY +EI +I S G+ +A A G++R + + Sbjct: 91 HAWLDSFFRSAMNCTLLAFTLNECAYATEIFAGAIKSTAPGEIEAGLAYGMSRFKLYTRV 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILP + + S+E I +L +T++A T T+P+I + + + S TY Y A +Y Sbjct: 151 ILPSALRRALPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYASFQAYGIAAALY 210 Query: 200 LI 201 + Sbjct: 211 AV 212 >gi|289642306|ref|ZP_06474454.1| polar amino acid ABC transporter, inner membrane subunit [Frankia symbiont of Datisca glomerata] gi|289507838|gb|EFD28789.1| polar amino acid ABC transporter, inner membrane subunit [Frankia symbiont of Datisca glomerata] Length = 216 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 107/200 (53%), Gaps = 6/200 (3%) Query: 6 FNLIIDSFPQLLYA-AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 ++I D+ LYA ++ TL I + V +L++G +A R+ + + + YV + Sbjct: 1 MDVITDNLG--LYADGLLGTLTICGLVAVAALLLGVVLAGFRVSPVPPLRA-VGTVYVTL 57 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 R PL + LF +GLP +GI F + LT+ +A++ E +RS I ++ GQ +A Sbjct: 58 VRNCPLTIVLFAFAFGLPEVGINGSYFAFGVTGLTVYTAAFVCEAVRSGIGAVETGQAEA 117 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI-PEIFQTAQRIVS 183 + +IGLT Q++R +ILPQ I PL + I+++K++++ + E++ A + Sbjct: 118 ARSIGLTFGQSLRLVILPQAIRAVIPPLGNVGIAMVKNSAIVGAFGVGGELYSVASTLNG 177 Query: 184 TTYQP-LIIYCELAFVYLIL 202 +P L +Y + YL++ Sbjct: 178 ARGEPALPVYAGVVIGYLVI 197 >gi|167587239|ref|ZP_02379627.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ubonensis Bu] Length = 245 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 110/205 (53%), Gaps = 15/205 (7%) Query: 8 LIIDSFPQ--LLYAAIVVTLPIA--CISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 L++ +FP L AA+ + L IA C S V+ + +G +A+ R + +++ ++ Sbjct: 13 LLVGAFPDGPLGGAALSLVLAIASACASAVLGVALGVAMALARGWARVLLLA-----FIG 67 Query: 64 IFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 FR P+L+ +F ++ +P H + ++ +L L AY++ + + I++ G Sbjct: 68 FFRAIPVLMLIFWTYFLMPMLLHTDV--PGLATVVCALALIGGAYLAHAVHAGIVAAGAG 125 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQ 179 QW A ++GLTR QT+R+++LPQ I ++++S++K TS+A + +PE+ F Q Sbjct: 126 QWQAGLSLGLTRWQTVRYVLLPQAIRIMTPSFVNQWVSLVKDTSLAYIVGVPELSFVATQ 185 Query: 180 RIVSTTYQPLIIYCELAFVYLILTS 204 P I+ +A +YL+L + Sbjct: 186 VNNRLMVYPAPIFLFVAAIYLVLCT 210 >gi|308184911|ref|YP_003929044.1| glutamine ABC transporter, permease protein [Helicobacter pylori SJM180] gi|308060831|gb|ADO02727.1| glutamine ABC transporter, permease protein [Helicobacter pylori SJM180] Length = 217 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 101/187 (54%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + + S P L + +TL I+ ++SL++GF A+I ++F IS I++ Sbjct: 1 MALDW-DFMFHSIPAFL-KGLELTLYISFFGILLSLLVGFLCAII-LYFKTRFISPIVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEISRNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QKESALSLGFSPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQ 187 + Y+ Sbjct: 176 FIGIYYK 182 >gi|190894778|ref|YP_001985071.1| glutamine ABC transporter ATP-binding protein [Rhizobium etli CIAT 652] gi|190700439|gb|ACE94521.1| glutamine ABC transporter, ATP-binding protein [Rhizobium etli CIAT 652] Length = 505 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 14/209 (6%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W + ++D P ++ + TL +A S V+ ++IG +AV+ I S + L Y Sbjct: 13 DW-DAMVDVLPSMISVGLKNTLILAAASTVLGVVIGMVLAVMGISQS-RWLRLPARVYTD 70 Query: 64 IFRGTPLLVQLFVIFYGLPHIGI-VFDS--FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 IFRG P +V + +I G IG +F F I++L+L AYI EI RS I S+ +G Sbjct: 71 IFRGLPAIVTILIIGQGFARIGREIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERG 130 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS----VASTITIPEIFQ 176 Q +A A+ ++ Q +R I++PQ I L ++FI +K +S + + EIF+ Sbjct: 131 QMEACRALSMSYGQGMRLIVIPQGIRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFR 190 Query: 177 TAQR--IVSTTYQPLIIYCELAFVYLILT 203 Q +V+ PL++ YL++T Sbjct: 191 VGQDQAVVTGNLSPLLLA---GVFYLVIT 216 >gi|326382188|ref|ZP_08203880.1| ABC transporter permease protein [Gordonia neofelifaecis NRRL B-59395] gi|326198918|gb|EGD56100.1| ABC transporter permease protein [Gordonia neofelifaecis NRRL B-59395] Length = 243 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 58/222 (26%), Positives = 112/222 (50%), Gaps = 7/222 (3%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIA-VIRIFFSDTIISLIMHFYVWI 64 + ++D+ P L + IVVTL + +++ ++ + ++R+ + I + Sbjct: 5 LDALVDALPAL-WRGIVVTLELTAGGALLAFVLALLLGNLVRV--PSMPVRFIARVLIEF 61 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRGT L+VQLF +FY LP +G D I++L LN+ AY +E++R ++ ++P Q +A Sbjct: 62 FRGTSLVVQLFWLFYVLPLLGYQLDPVFCGILALGLNYGAYGAEVVRGALTAVPAAQVEA 121 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+ + +Q + ++ PQ L + I +LK T+ AS IT+ ++ + T Sbjct: 122 AVALNFSARQRLTRVVFPQAWAMMIPSLGNLLIHLLKGTAFASFITLQDLTAGIVDLQKT 181 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 T L + +YLIL Y++ + I + + + + Sbjct: 182 TGDTLFSFGVGLVIYLIL---AYLVTLLINLAEARAKNRLGR 220 >gi|172062268|ref|YP_001809919.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171994785|gb|ACB65703.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 221 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 102/186 (54%), Gaps = 2/186 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + +TL ++ ++GF ++++R+ S + + F V FRGTPLL+QLF Sbjct: 15 LAKGLALTLAFTVTCALVGSLLGFVLSLLRMSPSRWLRGPVTAF-VEFFRGTPLLIQLFW 73 Query: 77 IFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +F+ P + + +++++ISLTL +A SE R S+ SI Q DA A+ L+ Sbjct: 74 VFFCFPVVLRLPIPPYLSVLISLTLYMAAITSETFRGSLKSIAGEQHDACIALSLSPHVK 133 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 I ++I PQ + + PL S +S+ K +++ S++ I ++ Q + ++T +P+ + Sbjct: 134 IVYVIFPQALLRAIPPLLSNVVSLFKESALISSVGIADLMFVGQNVSNSTARPVEFLTTV 193 Query: 196 AFVYLI 201 A +Y + Sbjct: 194 AVIYFL 199 >gi|94676800|ref|YP_588774.1| arginine transporter permease subunit ArtM [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219950|gb|ABF14109.1| arginine ABC transporter, permease protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 223 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 83/144 (57%), Gaps = 10/144 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV---------AIIISLTLNFS 103 I+S ++ Y+ +F GTP L+QLF+I+YG ++ +V +++L LN + Sbjct: 43 ILSYLVKIYILVFTGTPFLIQLFLIYYGPGQFVDLYSPWVWSLLSQPWLCAMLALALNST 102 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AY +++ +I +IP GQW A +G+ +KQ++ +++P + S S+E I +LKST Sbjct: 103 AYSTQLFVGAIRAIPLGQWHACTTLGMDKKQSL-FVLMPLALKRSLNAYSNEIILVLKST 161 Query: 164 SVASTITIPEIFQTAQRIVSTTYQ 187 S+ TITI ++ +Q I TY Sbjct: 162 SLVYTITIMDVMGYSQLIYGRTYD 185 >gi|327189448|gb|EGE56610.1| glutamine ABC transporter ATP-binding protein [Rhizobium etli CNPAF512] Length = 507 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 14/209 (6%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W + ++D P ++ + TL +A S V+ ++IG +AV+ I S + L Y Sbjct: 15 DW-DAMVDVLPSMISVGLKNTLILAAASTVLGVVIGMVLAVMGISQS-RWLRLPARVYTD 72 Query: 64 IFRGTPLLVQLFVIFYGLPHIGI-VFDS--FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 IFRG P +V + +I G IG +F F I++L+L AYI EI RS I S+ +G Sbjct: 73 IFRGLPAIVTILIIGQGFARIGREIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERG 132 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS----VASTITIPEIFQ 176 Q +A A+ ++ Q +R I++PQ I L ++FI +K +S + + EIF+ Sbjct: 133 QMEACRALSMSYGQGMRLIVIPQGIRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFR 192 Query: 177 TAQR--IVSTTYQPLIIYCELAFVYLILT 203 Q +V+ PL++ YL++T Sbjct: 193 VGQDQAVVTGNLSPLLLA---GVFYLVIT 218 >gi|325686938|gb|EGD28962.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK72] Length = 286 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 93/178 (52%), Gaps = 14/178 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL + V +++ A+++I ++ I F+V RGTPLLVQL + ++G+P Sbjct: 61 ITLLLTAGGAVFGILLAMVFAIVKIN-RVKVLYPIQAFFVSFLRGTPLLVQLMLTYFGIP 119 Query: 83 HI--------GIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 + G F+ + V I++ N +AY SE IR++I+++ G+ +A+ ++G Sbjct: 120 LLLKAINQKYGTSFNINEIPASVFAIVAFAFNEAAYASETIRAAILAVDPGEIEAARSLG 179 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +T KQ +I+P + L + I + K TS+A + + EIF AQ I Y+ Sbjct: 180 MTNKQVYMRVIIPNAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYR 237 >gi|317177917|dbj|BAJ55706.1| glutamine ABC transporter, permease protein [Helicobacter pylori F16] Length = 217 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 101/187 (54%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + + S P + + + +TL I+ ++SL++GF A+I ++F IS I++ Sbjct: 1 MALDW-DFMFHSIP-MFFKGLELTLYISFFGILLSLLVGFLCAII-LYFKTRFISPIVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QKESALSLGFGPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQ 187 + Y+ Sbjct: 176 FIGIYYK 182 >gi|312196903|ref|YP_004016964.1| polar amino acid ABC transporter inner membrane protein [Frankia sp. EuI1c] gi|311228239|gb|ADP81094.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EuI1c] Length = 317 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 106/190 (55%), Gaps = 8/190 (4%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFR 66 + D++P + + ++V L + + V + + G +A++R + L + Y +FR Sbjct: 96 MADAWPAVSHG-LLVNLRLFVVCSVAAGVCGLLLALLRTVPGPVLFPLRVLAAAYTDLFR 154 Query: 67 GTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 G P+++ L+++ +GLP + G D V I+LTL ++AY++E+IR+ I S+ Q Sbjct: 155 GLPVILGLYLVGFGLPALRLQGTPRDPVVLGGIALTLTYTAYVAEVIRAGIESVHPSQVA 214 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++GL+ +T+R ++LPQ + PL ++ IS+ K + + S + + + ++AQ S Sbjct: 215 AARSLGLSYAKTMRFVVLPQALRRVVPPLLNDAISLQKDSGLVSVLGVVDAVRSAQIATS 274 Query: 184 T--TYQPLII 191 Y P ++ Sbjct: 275 AHFNYSPYVL 284 >gi|253689165|ref|YP_003018355.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755743|gb|ACT13819.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 229 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 56/225 (24%), Positives = 108/225 (48%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + QL+ ++TL +A S V++L IG A ++ S+ +++ Y + RG P L Sbjct: 4 GYSQLILDGAIMTLELAASSLVLALAIGLIGASAKLS-SNRLLAGCFSCYTTLIRGIPDL 62 Query: 72 VQLFVIFYGL--------PHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL +G+ D A II+L + AY +E R + +++P+G Sbjct: 63 VLMLLIFYGLQIVLNGVTESMGVAQIDIDPLTAGIITLGFIYGAYFTETFRGAYLAVPRG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A G + + R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 QIEAAVAFGFSPMKVFRRILFPSMMRFALPGIGNNWQVILKATALVSLLGLNDVIKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 ++P +YLI T+ + +E +Q V+ Sbjct: 183 AGKGAHEPFYFALVAGAMYLIFTTISNGVLWWLERHYSQGVKKVN 227 >gi|119383823|ref|YP_914879.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119373590|gb|ABL69183.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein [Paracoccus denitrificans PD1222] Length = 230 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 119/208 (57%), Gaps = 11/208 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++++D+ P L+ + +L + ++FV L++G +A+++ +++ + YV + Sbjct: 6 FSVVVDALP-FLWKGLQFSLLLTAVAFVAGLVLGTGLALVQ-HLQVPVLAQLAKGYVALI 63 Query: 66 RGTPLLVQLFVIFYGLPHI-GIVFDSF----VAIIISLTLNFS----AYISEIIRSSIIS 116 R PL++ LF F+ +P I G +F++ V +++ L FS AY SEIIR + S Sbjct: 64 RSIPLIMVLFWFFFLVPLIAGWMFNNGRPMPVGGVLTAFLTFSLFEAAYYSEIIRVGLRS 123 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + KGQ++A+ A+ L+ QT RHIILPQ ++ + S+ I + + TS+ +++ ++ Sbjct: 124 VGKGQYEAADALSLSTLQTYRHIILPQVFRVTSPIILSQTIILFQDTSLVYVLSLTDLVG 183 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTS 204 A ++ + + +Y +A VYL++ + Sbjct: 184 AASKVAQLNGRLVEMYLTVAAVYLVICT 211 >gi|239944756|ref|ZP_04696693.1| putative glutamate ABC transporter permease protein [Streptomyces roseosporus NRRL 15998] gi|239991221|ref|ZP_04711885.1| putative glutamate ABC transporter permease protein [Streptomyces roseosporus NRRL 11379] gi|291448218|ref|ZP_06587608.1| glutamate transporter permease [Streptomyces roseosporus NRRL 15998] gi|291351165|gb|EFE78069.1| glutamate transporter permease [Streptomyces roseosporus NRRL 15998] Length = 313 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 99/173 (57%), Gaps = 9/173 (5%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIFRGTPLLVQ 73 Q + A++ TL ++ V SL++G +AV R+ SD I + ++ +FR PLL+ Sbjct: 61 QNIADAVLATLKAFGLAAVGSLVLGVLLAVGRL--SDHKPIRWVATTFIELFRSLPLLIT 118 Query: 74 LFVIFYGLPHIGIVFD-SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 ++ I+ +G + D S A+ L++ +E++R+ I S+PKGQ +A+YA+G+++ Sbjct: 119 IYAIW-----VGFLTDYSMWALAAGLSVYNGCVQAEVLRAGINSVPKGQSEAAYALGMSK 173 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Q + +++PQ I + + S+ + LK TS+ I PE+ QTA+ I S T Sbjct: 174 TQVMTTVLMPQAIRSMLPTIISQLVVTLKDTSLGFIILYPELLQTARLIASNT 226 >gi|238898835|ref|YP_002924517.1| arginine transport protein (ABC superfamily, membrane) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466595|gb|ACQ68369.1| arginine transport protein (ABC superfamily, membrane) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 222 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 95/168 (56%), Gaps = 20/168 (11%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG---LPHIG- 85 +S V++LI+G R F S I+ Y+ +F GTPLL+Q+F+I+YG P + Sbjct: 29 LSIVLTLILGLH----RPFLSS-----IVKIYLTLFTGTPLLIQIFLIYYGPGQFPSLRS 79 Query: 86 ------IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + ++ +++LTLN +AY +++ ++ ++P GQW+A A+G+++ Q +R + Sbjct: 80 CAWLWHFLSQPWLCAMMALTLNSAAYTTQLFYGALRALPVGQWEACQALGMSKTQALR-V 138 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +LP + + S+E + I KSTS+ TIT+ ++ Q I TY Sbjct: 139 LLPFALKRALSSYSNEVVLIFKSTSLVYTITLMDLMGYTQLIYGRTYD 186 >gi|169796219|ref|YP_001714012.1| glutamate/aspartate ABC transporter membrane protein [Acinetobacter baumannii AYE] gi|184157852|ref|YP_001846191.1| amino acid ABC transporter permease [Acinetobacter baumannii ACICU] gi|213157047|ref|YP_002319092.1| glutamate/aspartate transport system permease protein GltK [Acinetobacter baumannii AB0057] gi|215483674|ref|YP_002325895.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter baumannii AB307-0294] gi|239502271|ref|ZP_04661581.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter baumannii AB900] gi|260555281|ref|ZP_05827502.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Acinetobacter baumannii ATCC 19606] gi|301347720|ref|ZP_07228461.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter baumannii AB056] gi|301512790|ref|ZP_07238027.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter baumannii AB058] gi|301596775|ref|ZP_07241783.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter baumannii AB059] gi|332855483|ref|ZP_08435903.1| glutamate/aspartate transport system permease protein GltK [Acinetobacter baumannii 6013150] gi|332866620|ref|ZP_08437107.1| glutamate/aspartate transport system permease protein GltK [Acinetobacter baumannii 6013113] gi|332872493|ref|ZP_08440463.1| glutamate/aspartate transport system permease protein GltK [Acinetobacter baumannii 6014059] gi|169149146|emb|CAM87025.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Acinetobacter baumannii AYE] gi|183209446|gb|ACC56844.1| ABC-type amino acid transport system, permease component [Acinetobacter baumannii ACICU] gi|193077142|gb|ABO11920.2| glutamate/aspartate transport protein [Acinetobacter baumannii ATCC 17978] gi|213056207|gb|ACJ41109.1| glutamate/aspartate transport system permease protein GltK [Acinetobacter baumannii AB0057] gi|213988874|gb|ACJ59173.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter baumannii AB307-0294] gi|260411823|gb|EEX05120.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Acinetobacter baumannii ATCC 19606] gi|322508167|gb|ADX03621.1| ABC-type amino acid transport system, permease component [Acinetobacter baumannii 1656-2] gi|323517741|gb|ADX92122.1| ABC-type amino acid transport system, permease component [Acinetobacter baumannii TCDC-AB0715] gi|332727457|gb|EGJ58887.1| glutamate/aspartate transport system permease protein GltK [Acinetobacter baumannii 6013150] gi|332734494|gb|EGJ65607.1| glutamate/aspartate transport system permease protein GltK [Acinetobacter baumannii 6013113] gi|332739299|gb|EGJ70156.1| glutamate/aspartate transport system permease protein GltK [Acinetobacter baumannii 6014059] Length = 225 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 98/181 (54%), Gaps = 15/181 (8%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + TL + ++ + ++IG +A++R+ ++ + S FYV +FRG PL+ +F+ Sbjct: 15 LKEGFIFTLTVTVLAMMGGILIGTPLAMMRLS-NNALASNFAKFYVDLFRGIPLIQVIFI 73 Query: 77 IFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 ++ LP I G +F S +++ + +A+ SEI+RS I SI KGQ +A YA Sbjct: 74 FYFLLPKIFEFQSDTYWGPLFSS----VVTFAIFEAAFFSEIVRSGIQSISKGQVNAGYA 129 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G T Q++R+++LPQ L ++ I + + S+ I+ P+ A + + TY Sbjct: 130 LGFTYGQSMRYVVLPQAFRNMLPVLLTQTIILFQDVSLVYVISAPDFLGRADTL-ANTYG 188 Query: 188 P 188 P Sbjct: 189 P 189 >gi|182441007|dbj|BAG24132.1| probable amino acid permease [Pseudomonas cichorii] Length = 246 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 64/235 (27%), Positives = 116/235 (49%), Gaps = 31/235 (13%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L+ + LL+ ++TL ++ + +I+ +GF I + RI S S Y+ +FR Sbjct: 8 ELLGPQYLHLLFDGFLLTLRLSILVCLIATALGFLICLARIS-SSRFWSWPARGYLSLFR 66 Query: 67 GTPLLVQLFVIFYG--------------LPH----IGIVFD----SFVAIIISLTLNFSA 104 TPLLVQLF ++G +PH G++ + F+A LTL SA Sbjct: 67 NTPLLVQLFFWYFGVSALLPEDLVSWLNMPHEVNLAGLLIEWPSFEFIAGFWGLTLYSSA 126 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 +I+E R+ + S+ Q A A GL Q R+++LPQ + T+ PL + +++LK++S Sbjct: 127 FIAEEFRAGVASVRPQQRIAGQAQGLRPVQVWRYVVLPQAVRTALGPLLGQCMNVLKNSS 186 Query: 165 VASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + I + E+ ++++ + T++ AF + + YI I + ++ Q Sbjct: 187 LTMAIGLAELSYASRQVETETFK--------AFQAFGIATLLYIASIALIEAIGQ 233 >gi|172062269|ref|YP_001809920.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171994786|gb|ACB65704.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 223 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 108/205 (52%), Gaps = 4/205 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y + F+ + S LL + VT+ +A + + L++GF + ++ + I+ Sbjct: 1 MNYHFDFSFLAGSLGALL-DGLKVTVVLAVAANAMGLVLGFVLCLLAMS-RWAIVRWPAQ 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIP 118 ++ FR TP L+Q+ FY +P + VF D +++L LN +A+ +E R+ + ++P Sbjct: 59 LFIEFFRCTPALLQIIWFFYCIPMMVDVFIDPIAMGVLALGLNLTAFNAEAYRAGVQAVP 118 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 K DA+ A+GL Q ++LPQ + T+ L + I L+ +++ + + + ++ A Sbjct: 119 KEHLDAAVALGLRPWQRTIFVVLPQALRTAMPVLLTNGIGSLQQSALVAIVAVADLMYVA 178 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT 203 + I + Y+PL Y +A VY L+ Sbjct: 179 KSIATEAYRPLETYSVVALVYFALS 203 >gi|264678001|ref|YP_003277908.1| glutamine-binding periplasmic protein [Comamonas testosteroni CNB-2] gi|262208514|gb|ACY32612.1| glutamine-binding periplasmic protein [Comamonas testosteroni CNB-2] Length = 193 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 86/143 (60%), Gaps = 1/143 (0%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 +SFV +++G +AV+R+ + L + YV IFR P + L I + LP + IV D Sbjct: 1 MSFVPGVMLGTVVAVLRLMPLPPL-RLALTVYVEIFRNIPSVALLIFIVFALPDLNIVID 59 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 ++I++LTL SA+ ++ +RS I +IP Q +A+ ++G+ Q + ++LPQ + + Sbjct: 60 YEPSVILTLTLVCSAFTADYLRSGINTIPGSQIEAALSLGMRPLQIVSAVVLPQALRSVV 119 Query: 150 VPLSSEFISILKSTSVASTITIP 172 P++S I+++ STS+AS + P Sbjct: 120 QPMTSLLIALMLSTSLASQLPFP 142 >gi|331700615|ref|YP_004397574.1| polar amino acid ABC transporter inner membrane subunit [Lactobacillus buchneri NRRL B-30929] gi|329127958|gb|AEB72511.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus buchneri NRRL B-30929] Length = 229 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 101/177 (57%), Gaps = 7/177 (3%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 +F +LL + VT+ IA ++ ++ LI+G + V+R F + + +++ Y+ FR P + Sbjct: 14 NFERLL-GGLWVTVKIAAVALIVGLILGIILGVLRTF-KNRPLRVVLRLYLEFFRIVPTV 71 Query: 72 VQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 V LF+ +Y LP + + D ++ +L + +A +S+I+R ++IS+P+ Q ++ AI Sbjct: 72 VLLFLFYYILPRQLNFNLPGDQLATLVFALWV--AAEMSDIVRGALISVPQHQRESGKAI 129 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 GL R Q R++++PQ I+ + ++K+TS+ I++ ++ Q+I+ Sbjct: 130 GLNRYQLYRYVLIPQAISLEIPATINLATRVIKTTSLLMLISVMDVINIGQQIIEAN 186 >gi|194292632|ref|YP_002008539.1| ABC transporter, permease protein [Cupriavidus taiwanensis LMG 19424] gi|193226536|emb|CAQ72487.1| putative ABC transporter, permease protein [Cupriavidus taiwanensis LMG 19424] Length = 270 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 14/216 (6%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P LL ++ + I+ + + ++G I + + S + + +V FR P+LV Sbjct: 57 PALLRG-LLANIEISVFAMALGTVVGLVIGALSLS-SHAALRVFTRTWVQAFRNAPVLVL 114 Query: 74 LFVIFYGLP------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 ++ Y P H F +V +++ L L SA ++EI R +I SIP QW+A+ + Sbjct: 115 VYFTTYVFPFELHLVHWTFPFPDWVKVVLGLALPASANVAEIFRGAIQSIPSAQWEAAQS 174 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ---RIVST 184 + L R+Q R ++LPQ + P + + SI STS+AS + + ++ TAQ V+ Sbjct: 175 LALRRRQIFRLVVLPQCLRRMLPPWMNLYASITMSTSLASLVGVHDVVDTAQVASNTVAR 234 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T +++Y L ++ ++CY I + +H Sbjct: 235 TDFTILVYFTLLVLFF---AYCYPIARATRALERRH 267 >gi|167922531|ref|ZP_02509622.1| histidine transport system permease protein [Burkholderia pseudomallei BCC215] Length = 237 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 94/182 (51%), Gaps = 13/182 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+SL +GF +AV I + +S + Y ++FRGTPL VQL + + G+ + +V D Sbjct: 31 VVSLGLGFGLAVPLAIARASRNRAVSGAVWLYTYVFRGTPLYVQLLLCYTGIYSLSVVHD 90 Query: 90 ----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + +++ TLN AY +EI +I S G+ +A A G++R + + Sbjct: 91 HAWLDSFFRSAMNCTLLAFTLNECAYATEIFAGTIKSTAPGEIEAGLAYGMSRFKLYTRV 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILP + + S+E I +L +T++A T T+P+I + + + S TY Y A +Y Sbjct: 151 ILPSALRRALPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYASFQAYGIAAALY 210 Query: 200 LI 201 + Sbjct: 211 AV 212 >gi|187923550|ref|YP_001895192.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187714744|gb|ACD15968.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 237 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 102/196 (52%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S I +AV R+ +S + Y ++FRGTPL VQL +I+ Sbjct: 21 SGLAVTLWLLVASVGIGFCAAIPLAVARVS-KKRWLSTPVRLYTYVFRGTPLYVQLLLIY 79 Query: 79 YGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D+F I++ LN AY +EI +I S G+ +A+ A Sbjct: 80 TGMYSLEFVRSHQLLDAFFRSGFHCAILAFALNTCAYTTEIFAGAIRSTSHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++ R I++P + A+PL S+E I +L +T+VA T T+P+I + A+ S TYQ Sbjct: 140 GMSWFTMYRRIVIPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYQ 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL+++ Sbjct: 199 SFDAFGLAALIYLVVS 214 >gi|325972549|ref|YP_004248740.1| polar amino acid ABC transporter inner membrane protein [Spirochaeta sp. Buddy] gi|324027787|gb|ADY14546.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta sp. Buddy] Length = 266 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 16/206 (7%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL-----------I 57 I+ + L T+ IA I + +IGF + +++ +L I Sbjct: 15 ILQEYSGSLAKGAATTMVIAIICTALGCVIGFAVGIVQTLEPKKKDNLAYKIILRIIKLI 74 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV +FRGTP+++Q I+YG + G+ + A I+ +++N AY++E +R I+S Sbjct: 75 LTAYVELFRGTPMMLQAAFIYYGASQVFGLNLGMWEAAILIVSINTGAYMAETVRGGILS 134 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + GQ + + AIG+ QT+ +ILPQ + + + I +K T V S I E+F Sbjct: 135 VDNGQTEGAKAIGMNHFQTMLTVILPQALRNIMPQIGNNLIINIKDTCVLSIIGTVELFF 194 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLIL 202 T + I Y Y E A V LI+ Sbjct: 195 TFKSISGALY----TYFEAATVILII 216 >gi|167572785|ref|ZP_02365659.1| histidine transport system permease protein [Burkholderia oklahomensis C6786] Length = 237 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 95/182 (52%), Gaps = 13/182 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+S+ +GF +AV I + ++S + Y ++FRGTPL VQL + + G+ + +V D Sbjct: 31 VVSIGLGFCLAVPLAIARASRNRLLSRAVWLYTYVFRGTPLYVQLLLCYTGIYSLSVVHD 90 Query: 90 ----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + +++ TLN AY +EI +I S G+ +A A G++R + + Sbjct: 91 HAWLDSFFRSAMNCTLLAFTLNECAYATEIFAGAIKSTSPGEIEAGLAYGMSRFKLYTRV 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILP + + S+E I +L +T++A T T+P+I + + + S TY Y A +Y Sbjct: 151 ILPSALRRALPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYASFQAYGIAAVLY 210 Query: 200 LI 201 + Sbjct: 211 AV 212 >gi|134295206|ref|YP_001118941.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia vietnamiensis G4] gi|134138363|gb|ABO54106.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia vietnamiensis G4] Length = 237 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 103/196 (52%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S + + +AV R+ +S + Y ++FRGTPL VQL +++ Sbjct: 21 SGLAVTLWLLVASISLGFVCAVPLAVARVS-KKRWVSTPVRLYTYVFRGTPLYVQLLLMY 79 Query: 79 YGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D+F I++ LN AY +EI +I +IP G+ +A+ A Sbjct: 80 TGMYSLEFVRSHSLLDAFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++ R +I+P + A+PL S+E I +L +T+VA T T+P+I + A+ S TY Sbjct: 140 GMSPFTMYRRVIVPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYM 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL ++ Sbjct: 199 AFQSFGLAALIYLAVS 214 >gi|116751319|ref|YP_848006.1| polar amino acid ABC transporter inner membrane subunit [Syntrophobacter fumaroxidans MPOB] gi|116700383|gb|ABK19571.1| polar amino acid ABC transporter, inner membrane subunit [Syntrophobacter fumaroxidans MPOB] Length = 222 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 119/217 (54%), Gaps = 5/217 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I++ P +L ++V + + + + L++G AV +++ + L + YVW FRG Sbjct: 8 VINALPYMLEGSLVTVVVVVG-AMALGLVLGIPFAVGQVYGGPGV-RLAIAAYVWFFRGV 65 Query: 69 PLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PLLV LF+ ++GL + + +F II L SAY S+I R +I+S+P+GQ A+ A Sbjct: 66 PLLVLLFLFYFGLCSLLDLNLSAFTVAIIVLGSISSAYQSQIFRGAILSLPEGQLKAARA 125 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G++ + + +ILPQ + S S+E+ +LK ++V + + EI + + TYQ Sbjct: 126 LGMSDAKAVFFVILPQALRLSIPGWSNEYSIVLKDSAVTYALGVAEIMARTHFVATRTYQ 185 Query: 188 PLIIYCELAFVYLILTSFCYIIQIK-IESSVTQHTYS 223 L +Y +YL+LT + + ++ +ES V Y Sbjct: 186 HLPLYMAAGAIYLLLT-YAGVKGLRLLESKVRIKGYG 221 >gi|307544954|ref|YP_003897433.1| ABC transporter permease [Halomonas elongata DSM 2581] gi|307216978|emb|CBV42248.1| ABC-type transport system permease protein [Halomonas elongata DSM 2581] Length = 259 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 94/174 (54%), Gaps = 19/174 (10%) Query: 64 IFRGTPLLVQLFVIFYGL----PHIGIVFDSFVA---------IIISLTLNFSAYISEII 110 + RGTPLL+Q+++++YGL P++ V S++ ++LTL+F+ Y E++ Sbjct: 86 LIRGTPLLLQIWLLYYGLGSLFPYLPGVRGSWLWPYLTEAWPYAFVALTLSFAGYEGEVM 145 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R +PKG+ +A+ ++G+ +R I LP+ + L+ E I LK+T + +TI Sbjct: 146 RGGFAGVPKGELEAARSLGMHPLTILRRIWLPRAVQRVLPTLNGELIIQLKATPLVATIA 205 Query: 171 IPEIFQTAQRIVSTT---YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + + RI T Y+PL++ +A +YLIL + +E + ++H+ Sbjct: 206 AVDTYAVFGRIRQETYMVYEPLLL---MALIYLILAGLITLAFGALECAWSRHS 256 >gi|254386080|ref|ZP_05001394.1| glutamate transporter permease [Streptomyces sp. Mg1] gi|194344939|gb|EDX25905.1| glutamate transporter permease [Streptomyces sp. Mg1] Length = 297 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 111/210 (52%), Gaps = 10/210 (4%) Query: 4 EWFNLIIDS--FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHF 60 +W + DS + L ++ TL I+ VI+L +G + + R+ SD + + + Sbjct: 49 KWTPFVTDSDVWTTFLIPGLLETLKAGVIAVVIALPLGALLGIGRL--SDHAWVRVPVGA 106 Query: 61 YVWIFRGTP-LLVQLF--VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 +V FR P L++ LF ++ + A++ L L SA I+EI+R+ + S+ Sbjct: 107 FVEFFRAIPVLMLMLFGSALYVQFSSVSSDLRPLYAVVTGLVLYNSAVIAEIVRAGVQSL 166 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST-ITIPEIFQ 176 P+GQ DA+ AIG+ + QT+ H+++PQ +T L S+ + ILK T++ T + + E+ Sbjct: 167 PRGQADAAKAIGMRKGQTMVHVLIPQAVTAMLPALVSQLVVILKDTALGGTLLGLAELLS 226 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFC 206 A++I + + + +A +Y IL +F Sbjct: 227 MARQISANYSNTIATFTVIALIY-ILVNFA 255 >gi|254251720|ref|ZP_04945038.1| hypothetical protein BDAG_00916 [Burkholderia dolosa AUO158] gi|124894329|gb|EAY68209.1| hypothetical protein BDAG_00916 [Burkholderia dolosa AUO158] Length = 237 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 15/210 (7%) Query: 5 WFN-LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W N L D + + + +TL + +S + + +AV R+ +S + Y + Sbjct: 9 WRNYLYTDGYR---FTGVAITLWLLVVSIGLGFCLSVPLAVARVS-KKKWLSGAVWLYTY 64 Query: 64 IFRGTPLLVQLFVIFYGL---------PHIGIVF-DSFVAIIISLTLNFSAYISEIIRSS 113 +FRGTPL VQL + + GL P + F D +++ TLN AY +EI + Sbjct: 65 VFRGTPLYVQLLLCYTGLYSLQVVRGTPMLDAFFRDGMHCTLLAFTLNTCAYTTEIFAGA 124 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I + G+ +A+ A G++ R +ILP + S S+E I +L +T+VA T T+P+ Sbjct: 125 IKATTYGEIEAARAYGMSTFTMYRRVILPSALRRSLPLYSNEVILMLHATTVAFTATVPD 184 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I + A+ + S TY + A +YL+++ Sbjct: 185 ILKIARDVNSATYMSFHAFGIAALLYLMIS 214 >gi|296877049|ref|ZP_06901090.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 15912] gi|296431910|gb|EFH17716.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 15912] Length = 266 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 114/226 (50%), Gaps = 15/226 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + D+FP ++ + VT+ +A +I A+++I I+ I +V RGT Sbjct: 30 VFDAFPSVI-GKLPVTILLALGGAFFGIIFAMVFALVKIN-RVRILYPIQAVFVSFLRGT 87 Query: 69 PLLVQLFVIFYGLPHI--------GIVFD-----SFVAIIISLTLNFSAYISEIIRSSII 115 PLLVQL + +YG+P I G F+ + + I++L N +AY SE IR++I+ Sbjct: 88 PLLVQLMLTYYGIPLILKAINQSYGTAFNINAIPAELFAIVALAFNEAAYASETIRAAIL 147 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ G+ +A+ ++G+T +Q II+P + L + I + K TS+A + ++ EIF Sbjct: 148 SVDPGEIEAARSLGMTNRQVYHRIIIPNAAVVATPTLINSLIGLTKGTSLAFSASVVEIF 207 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 A+ I + + + ++ VY I+ I+ IE + T Sbjct: 208 AQARIIGGSDLKYFERFITVSIVYWIVNILIEILGRHIERRLDIET 253 >gi|262278837|ref|ZP_06056622.1| glutamate/aspartate transporter [Acinetobacter calcoaceticus RUH2202] gi|262259188|gb|EEY77921.1| glutamate/aspartate transporter [Acinetobacter calcoaceticus RUH2202] Length = 225 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 98/181 (54%), Gaps = 15/181 (8%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + TL + ++ + ++IG +A++R+ S+ I S FYV +FRG PL+ +F+ Sbjct: 15 LKEGFIFTLTVTVLAMLGGILIGTPLAMMRLS-SNAIASNFAKFYVDLFRGIPLIQVIFI 73 Query: 77 IFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 ++ LP I G +F S +++ + +A+ SEI+RS I SI +GQ +A YA Sbjct: 74 FYFLLPKIFEFQSDTYWGPLFSS----VVTFAIFEAAFFSEIVRSGIQSISRGQVNAGYA 129 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G T Q++R+++LPQ L ++ I + + S+ I+ P+ A + + TY Sbjct: 130 LGFTYGQSMRYVVLPQAFRNMLPVLLTQTIILFQDISLVYVISAPDFLGRADTL-ANTYG 188 Query: 188 P 188 P Sbjct: 189 P 189 >gi|302521615|ref|ZP_07273957.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. SPB78] gi|302430510|gb|EFL02326.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. SPB78] Length = 244 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 109/221 (49%), Gaps = 9/221 (4%) Query: 4 EWFNLIIDSFPQL---LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++F+L DS + L+ + T+ A ++F +S + GF +A I +I+ F Sbjct: 3 DFFSLFFDSLDDVGSGLWVTVQATVLGALVAFALSFVFGF-MANSTYLLVRGISRVIVEF 61 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FRGT L VQ+F +FY LP + G + +++ +N+ AY SE++R ++ ++P+ Sbjct: 62 ----FRGTSLYVQVFWLFYALPMLTGYQLNPLFCGVVAFGINYGAYGSEVVRGALNAVPR 117 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 Q++A+ A+ + Q +R +ILPQ +S I +LK+T + IT +I Q Sbjct: 118 AQFEAAVALNFSPVQRMRKVILPQAWVQMIPSFTSLLIMLLKATPLLWLITAVDITAVVQ 177 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++ T Y L +Y +L + +E + + Sbjct: 178 QMRDRTGATAPAYLTLLVIYFVLAYLLTLGMNALERAAKKR 218 >gi|333007434|gb|EGK26914.1| binding-protein-dependent transport system inner membrane component family protein [Shigella flexneri VA-6] Length = 180 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 96/171 (56%), Gaps = 13/171 (7%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYI 106 YV +FR PL+VQ F + +P IG+ F + F++ ++ L L ++ + Sbjct: 1 MYVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTASRV 60 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 E +R++I S+P+GQ +A+ A+GLT QT R+++LP P++SE ++++K++++A Sbjct: 61 CEQVRAAIQSLPRGQKNAALAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIA 120 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 STI + ++ A +++ + + + Y+++ +F ++ +E V Sbjct: 121 STIGLVDMAAQAGKLLDYSAHAWESFTAITLTYVLINAFIMLVMTLVERKV 171 >gi|70728646|ref|YP_258395.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68342945|gb|AAY90551.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 242 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 86/167 (51%), Gaps = 11/167 (6%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV-----------AIIISLTLNFSAYIS 107 Y + RG P LV + +IFY L F F+ A +I+L + AY + Sbjct: 64 QLYTTLIRGVPDLVLMLLIFYSLQTWLTSFTDFMEWDYIEINPFSAGVITLGFIYGAYFT 123 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E R +I+++P+GQ +A+ A GL R Q R ++ PQ + + + + ++ +LK+T++ S Sbjct: 124 ETFRGAILAVPRGQVEAATAYGLKRGQRFRFVVFPQMMRFALPGIGNNWMVMLKATALVS 183 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I + ++ + AQ +TYQ A +YL++TS + ++E Sbjct: 184 IIGLADLVKAAQDAGKSTYQLFYFLVLAALIYLLITSASNFVLRRLE 230 >gi|116334343|ref|YP_795870.1| ABC-type amino acid transport system, permease component [Lactobacillus brevis ATCC 367] gi|116099690|gb|ABJ64839.1| ABC-type amino acid transport system, permease component [Lactobacillus brevis ATCC 367] Length = 212 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 101/195 (51%), Gaps = 1/195 (0%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I ++ L + TL + ++ + SLIIG F A++ S + Y+ IFR Sbjct: 4 IFQTYGGTLLYGLGQTLLCSLLALIFSLIIGTFFALLEESPSK-FGRGVARVYIEIFRNI 62 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLLV + P I + F A I LTL SA+I+E +R+ I S+ GQ + + A Sbjct: 63 PLLVITMFFYVVFPLYVIKMNGFTAGTIGLTLYTSAFIAETVRAGIQSVDPGQMEGARAN 122 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GL+ Q +R+I+LPQ PL ++F++++K++S + + ++ I S++ + Sbjct: 123 GLSFWQAMRYIVLPQAFRYVIPPLGNQFVNLVKNSSTLAFVGGFDLMYQGNVIASSSLET 182 Query: 189 LIIYCELAFVYLILT 203 + Y + +YL++T Sbjct: 183 IAAYSAVGVLYLVIT 197 >gi|261839896|gb|ACX99661.1| glutamine ABC transporter, permease protein [Helicobacter pylori 52] Length = 217 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 100/187 (53%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + + S P L + +TL I+ ++SL++GF A+I ++F IS I++ Sbjct: 1 MALDW-DFMFHSIPMFL-KGLELTLYISFFGILLSLLVGFLCAII-LYFKTRFISPIVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QKESALSLGFGPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQ 187 + Y+ Sbjct: 176 FIGIYYK 182 >gi|217032566|ref|ZP_03438056.1| hypothetical protein HPB128_172g29 [Helicobacter pylori B128] gi|216945771|gb|EEC24395.1| hypothetical protein HPB128_172g29 [Helicobacter pylori B128] Length = 217 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 107/201 (53%), Gaps = 5/201 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + + S P L + +TL I+ ++SL++GF A++ ++F IS +++ Sbjct: 1 MALDW-DFMFHSIPAFL-KGLELTLYISFFGILLSLLVGFLCAIV-LYFKMRFISPVVYV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QRESALSLGFSPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQPLIIYCELAFVYLI 201 ++ Y+ L+ YLI Sbjct: 176 LIGIYYKTTESLLMLSLTYLI 196 >gi|295693352|ref|YP_003601962.1| amino acid ABC transporter, permease protein [Lactobacillus crispatus ST1] gi|295031458|emb|CBL50937.1| Amino acid ABC transporter, permease protein [Lactobacillus crispatus ST1] Length = 219 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 45/140 (32%), Positives = 74/140 (52%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 +F ++S I+ YV + R TPLL+QLF ++Y P IG+ + V II L AY++ Sbjct: 43 YFKVPVLSQILTAYVELARNTPLLIQLFFLYYAFPVIGLKMSAEVCGIIGLIFLGGAYMA 102 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E + Q ++ A+G+ Q R+++ PQ + S L++ I ++K TS+ S Sbjct: 103 EGFTGGFNGVSSSQINSGKALGMNNLQLARYVVFPQGFSLSMPALTANIIFLIKETSIFS 162 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I IPE+ TA ++ Y Sbjct: 163 VIAIPELTNTALDLIGMYYH 182 >gi|254779719|ref|YP_003057825.1| ABC-type transport system, permease; putative amino-acid transporter GlnP1 [Helicobacter pylori B38] gi|254001631|emb|CAX29759.1| ABC-type transport system, permease; Putative amino-acid transporter GlnP1 [Helicobacter pylori B38] Length = 217 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 107/201 (53%), Gaps = 5/201 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + ++ S P + + +TL I+ ++SL++GF A++ ++F +S I++ Sbjct: 1 MALDW-DFMLHSIPAF-FKGLELTLYISFFGILLSLLVGFLCAIV-LYFKTRFLSPIVYV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QRESALSLGFSPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQPLIIYCELAFVYLI 201 + Y+ L+ YLI Sbjct: 176 FIGIYYKTTESLLMLSLTYLI 196 >gi|227499008|ref|ZP_03929145.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226904457|gb|EEH90375.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 240 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 85/155 (54%), Gaps = 13/155 (8%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFD-------------SFVAIIISLTLNFSAYIS 107 YV I R P +V L++++YGLP + D + ++ LTL+ AY++ Sbjct: 62 YVLICRSLPNMVLLYLVYYGLPIFVMAMDQEGVFHFPVEKVTALQVAVVGLTLHTGAYLT 121 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 EI R++ ++P+GQ +A+ +IG+T Q +I PQ +T + +++F+S +KSTS+ Sbjct: 122 EIFRAAYEAVPEGQKEAAKSIGMTGLQAFFRVIFPQAVTVALPMFANQFLSTMKSTSIVF 181 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 IT+ E+F A+ + + Y +A +Y ++ Sbjct: 182 VITVVELFGAAKLFSEDSMRYFEAYMAVAILYWLM 216 >gi|239813838|ref|YP_002942748.1| polar amino acid ABC transporter inner membrane subunit [Variovorax paradoxus S110] gi|239800415|gb|ACS17482.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 244 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 53/166 (31%), Positives = 94/166 (56%), Gaps = 3/166 (1%) Query: 39 GFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD---SFVAII 95 G + +IR + + + + +V +FR PLLVQ+F+ ++ +P + V SFV ++ Sbjct: 47 GSLVGIIRTLPNSPWLIRLGNAWVELFRNIPLLVQIFLWYHVIPALVPVMKGVPSFVLVV 106 Query: 96 ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSE 155 ++L SA I+E +RS I ++PKGQ A A+G T Q R++ILP PL+SE Sbjct: 107 LALGFFTSARIAEQVRSGIQALPKGQRYAGMAVGFTTPQYYRYVILPMAYRIIIPPLTSE 166 Query: 156 FISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 ++I K++SVA +++ E+ A + T + + +Y + +Y+I Sbjct: 167 TMNIFKNSSVAFAVSVTELTMFAMQAQEETSRGIEVYLAVTGLYVI 212 >gi|157368268|ref|YP_001476257.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157320032|gb|ABV39129.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 246 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 115/217 (52%), Gaps = 6/217 (2%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ ++P +TL I+ ++ V S IIG + V + S + + ++ + FR Sbjct: 13 LLWGTWPDGPLGGAALTLAISLMAGVASAIIGTLLGVA-LAMSRGVAAGLLAALLGFFRA 71 Query: 68 TPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P+++ +F ++ LP + G+ ++ +L L SAY++ +++ I +I GQW A Sbjct: 72 IPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIAAIGPGQWQAGL 131 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GLTR QT+R I+LPQ + +++IS++K TS+A + + E+ A ++ + + Sbjct: 132 SLGLTRWQTLRMIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQVNNRS- 190 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 ++Y F+++ L F + + + + ++ +S Sbjct: 191 ---MVYPMEVFLFIALVYFVFCLALDLLANAVNRRFS 224 >gi|86742204|ref|YP_482604.1| amino acid ABC transporter permease [Frankia sp. CcI3] gi|86569066|gb|ABD12875.1| amino acid ABC transporter membrane protein 2, PAAT family [Frankia sp. CcI3] Length = 293 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 104/207 (50%), Gaps = 3/207 (1%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 LL+ ++ TL A + + + +G +A+ R+ + + V +FR P+L+ + Sbjct: 64 LLWNGLLDTLRAALTAMLFASAVGTLLALARLSRRRAV-RIPATLLVELFRSLPVLMLIL 122 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 + GLP +G +F A++I LT A +SEI R+ I S+ +GQ +A+ A+GL Q Sbjct: 123 FAYLGLPALGWRLSAFWALVIGLTAYNGAVLSEIFRAGIQSVDRGQTEAAAAVGLRPVQI 182 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTYQPLIIYC 193 R I PQ I + L S+ +++LK TS+ I E+ ++ + V + L IY Sbjct: 183 FRLIQFPQAIRRMSPTLVSQLVTLLKDTSLGYVIAYSELLRSGRGAVEYLGSRYALPIYT 242 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQH 220 +A +Y++ ++ ++ S + Sbjct: 243 VMAVMYIVTNGLLSLLARWLDRSQDRR 269 >gi|152986056|ref|YP_001348447.1| putative amino acid permease [Pseudomonas aeruginosa PA7] gi|150961214|gb|ABR83239.1| probable amino acid permease [Pseudomonas aeruginosa PA7] Length = 238 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 51/168 (30%), Positives = 92/168 (54%), Gaps = 19/168 (11%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP--------------H 83 +G +A+ R+ ++S Y+ +FR TPLLVQLF ++G+P H Sbjct: 35 VGAPLAIARLS-RRRLLSWPARAYLALFRNTPLLVQLFFWYFGVPALLPEELVSWLNTPH 93 Query: 84 IGIVFD----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + D F+A LTL SA+++E R+ I S+ Q A A+GLT++Q R + Sbjct: 94 ETPLLDWPSFEFLAGAWGLTLYTSAFVAEEFRAGIASVRPEQRAAGLALGLTQRQVWRVV 153 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +LPQ + T+ PL ++++ LK++S+A I + E+ ++++ + T++ Sbjct: 154 VLPQALRTALPPLLGQYMNALKNSSLAMAIGLAELSYASRQVETETFK 201 >gi|76812175|ref|YP_334236.1| histidine transport system permease [Burkholderia pseudomallei 1710b] gi|76581628|gb|ABA51103.1| histidine transport system permease protein [Burkholderia pseudomallei 1710b] Length = 516 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 61/187 (32%), Positives = 100/187 (53%), Gaps = 17/187 (9%) Query: 32 FVISLIIGFF----IAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV 87 V SL GF +AV R+ + +S + FY ++FRGTPL VQL +++ G+ + V Sbjct: 309 LVASLGAGFVCAVPLAVARVS-KNRWLSTPVRFYTYVFRGTPLYVQLLLLYTGMYSLAFV 367 Query: 88 FD----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 + F I++ LN AY +EI +I +I G+ +A+ A G++ R Sbjct: 368 REHAWLDAFFRSGFHCAILAFALNTCAYTTEIFAGAIRAIAHGEVEAARAYGMSPFTMYR 427 Query: 138 HIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +ILP ++ A+PL S+E I +L +T+VA T T+P+I + A+ S TY + A Sbjct: 428 RVILPSSLRR-ALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYMAFQSFGIAA 486 Query: 197 FVYLILT 203 +YL ++ Sbjct: 487 LIYLAVS 493 >gi|271500847|ref|YP_003333872.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270344402|gb|ACZ77167.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 238 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 79/129 (61%) Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 F+ +I+L+L ++AY S+ +R ++ ++P+GQW++ A+G+++ R +I+PQ + Sbjct: 104 FLCGVIALSLLYAAYASQTLRGALKAVPQGQWESGQALGMSKGVIFRRLIMPQMWRHALP 163 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 L ++++ +LK T++ S I++ ++ + I + T +P Y A +YL +T F +I Sbjct: 164 GLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYMIAAAIYLAITLFSQVIL 223 Query: 211 IKIESSVTQ 219 KIE+ T+ Sbjct: 224 KKIETRATR 232 >gi|300309585|ref|YP_003773677.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300072370|gb|ADJ61769.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 227 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 102/193 (52%), Gaps = 3/193 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M YE+ F + +P LL A T+ ++ ++ ++ ++G AV R + + + Sbjct: 1 MHYEFDFASVAAHWPLLLQGAWT-TVQLSFLATLLGFVLGAACAVARGSRHGWLRAAVSG 59 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TPLL+Q + + +GL +G+ ++L +N AY EI+R+ + SI Sbjct: 60 -YVELIRNTPLLIQCYFLIFGLSSVGVTMPIMAGATLALVINIGAYSCEIVRAGLESIHH 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ +GL+ Q H++L + L+S+F+ ++ ++S+ S++ E+ A Sbjct: 119 GQLEAASCLGLSPAQVFWHVVLLPAVERVWPALTSQFVLMMLASSILSSVGAEELLGVAN 178 Query: 180 RIVSTTYQPLIIY 192 R+ S T++ ++ Sbjct: 179 RVQSDTFRNFEVF 191 >gi|284044553|ref|YP_003394893.1| polar amino acid ABC transporter inner membrane subunit [Conexibacter woesei DSM 14684] gi|283948774|gb|ADB51518.1| polar amino acid ABC transporter, inner membrane subunit [Conexibacter woesei DSM 14684] Length = 279 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 51/164 (31%), Positives = 92/164 (56%), Gaps = 7/164 (4%) Query: 34 ISLIIGFFIAVIRIFFSDTI--ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI---GIVF 88 I L++G IA+ R + + + L++ Y + RG P ++ ++++ +G+P + G+ Sbjct: 81 IVLVLGLAIALGRTTQAPALFPVRLLLAVYTDVLRGIPTILLVYLVGFGIPALALNGLPT 140 Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 D V +L L +SAY++E+ R+ + S+ Q A+ A+GL R Q +R ++LPQ + Sbjct: 141 DPVVLGGAALVLTYSAYVAEVYRAGLDSVHPSQRAAALAVGLNRVQALRFVVLPQAVRRV 200 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST--TYQPLI 190 PL ++FIS+ K ++ S + E F+ AQ S+ Y PLI Sbjct: 201 IPPLLNDFISLQKDVALISVLGPLEAFRVAQIEASSNFNYTPLI 244 >gi|187477188|ref|YP_785212.1| amino acid ABC transporter permease [Bordetella avium 197N] gi|115421774|emb|CAJ48285.1| amino acid ABC transporter, permease protein [Bordetella avium 197N] Length = 225 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 101/185 (54%), Gaps = 4/185 (2%) Query: 6 FNL--IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 FN+ ++ P L A++ TL + ++G +A++R +SL + + Sbjct: 12 FNMKVAVEYAPALGMGALL-TLGTGLAVVLAGTLLGVLLAILRAL-EVRPLSLAIVMFAD 69 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + R P LV L V+++GLP +G+ +F+ ISL+L +AY E + + I S+P GQ + Sbjct: 70 VLRSLPPLVLLIVLYFGLPEVGLPLSAFLVTWISLSLVLAAYAEESVWAGIASLPPGQME 129 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ + GL+ Q +R +ILPQ + + L++ ISI K+T++ S +++ E+ AQ S Sbjct: 130 AARSSGLSWWQAMRWVILPQAVRRAVPTLTNRIISITKNTALGSVVSLHELLNAAQGASS 189 Query: 184 TTYQP 188 + P Sbjct: 190 LSGNP 194 >gi|315182022|gb|ADT88935.1| hypothetical transmembrane permease component of ABC transporter [Vibrio furnissii NCTC 11218] Length = 238 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 14/216 (6%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + L + +TL +A + + +++G +A + I Y + RG P L Sbjct: 13 GWGDELLKGLAITLGLALCALPVGMVLGTGVAALSIS-KHKGHRWFATVYTTVLRGLPEL 71 Query: 72 VQLFVIFYGL------------PHIGI-VFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 + LF+I++G+ P G + F A +I+L L FS Y +E++R + ++ Sbjct: 72 LTLFIIYHGVGLLINKTLKWLDPSNGFFELNPFGAGVIALGLVFSGYAAEVLRGAWKAMD 131 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A Y++ + R Q I PQ + + L + +I++LK T++ S I + ++ + A Sbjct: 132 KGQREAGYSLAMGRGQIFWLIERPQLLRLALPGLGNLWINLLKDTALVSVIALDDLMRAA 191 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 V T +P + Y + Y + C + +E Sbjct: 192 NIAVGATKKPFLFYLTVCLAYWAVCVCCERVLAAME 227 >gi|24378948|ref|NP_720903.1| putative amino acid ABC transporter, permease [Streptococcus mutans UA159] gi|290581034|ref|YP_003485426.1| putative amino acid ABC transporter permease [Streptococcus mutans NN2025] gi|24376835|gb|AAN58209.1|AE014892_2 putative amino acid ABC transporter, permease [Streptococcus mutans UA159] gi|254997933|dbj|BAH88534.1| putative amino acid ABC transporter permease protein [Streptococcus mutans NN2025] Length = 267 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 62/229 (27%), Positives = 113/229 (49%), Gaps = 20/229 (8%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W + D+ P +L + TL + + L++ A++++ I+ I F+V Sbjct: 24 FSW-RAVFDAIPSIL-EKLPTTLILTLGGSIFGLVLALLFAIVKLN-RVKILYPIQAFFV 80 Query: 63 WIFRGTPLLVQLFVIFYGLP--------HIGIVFD-----SFVAIIISLTLNFSAYISEI 109 RGTP+LVQL + +YG+P +G F+ + V I + N +AY SE Sbjct: 81 SFLRGTPILVQLMLTYYGIPLLLKALNQKMGTDFNINAIPASVFAITAFAFNEAAYTSET 140 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IR++I S+ G+ +A+ ++G+T Q R +I+P + L + I + K TS+A Sbjct: 141 IRAAIQSVNSGEIEAAKSLGMTTAQVYRRVIIPNAAVVATPTLINTLIGLTKGTSLAFNA 200 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVY----LILTSFCYIIQIKIE 214 I E+F AQ + + Y+ + +A +Y +I+ +I+ K+E Sbjct: 201 GIVEMFAQAQILGGSDYRYFERFISVAIIYWGVSIIIEQVGRLIEKKME 249 >gi|152988488|ref|YP_001351210.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|254243965|ref|ZP_04937287.1| hypothetical protein PA2G_04795 [Pseudomonas aeruginosa 2192] gi|296392008|ref|ZP_06881483.1| ABC transporter permease [Pseudomonas aeruginosa PAb1] gi|126197343|gb|EAZ61406.1| hypothetical protein PA2G_04795 [Pseudomonas aeruginosa 2192] gi|150963646|gb|ABR85671.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 231 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 11/154 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIGIVFDS-------FVAIIISLTLNFSAYISEI 109 Y I RG P + + +I++G L +G +F F A ++L L F AY +E+ Sbjct: 55 YTTIVRGVPETLWVLMIYFGTVSGLNALGDLFGKPDLALSPFAAGTLALGLCFGAYATEV 114 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +++SIP+G +A A+GL+ + I+LPQ + L + ++ +LK T++ S I Sbjct: 115 FRGALLSIPRGHREAGQALGLSPGRIFWRIVLPQIWRVALPGLGNLYLILLKDTALVSLI 174 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 T+ EI + AQ + T +P Y A +YL LT Sbjct: 175 TLDEIMRKAQVASNATKEPFTFYMTAAAIYLSLT 208 >gi|253990627|ref|YP_003041983.1| glutamate/aspartate transport system permease protein gltj [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782077|emb|CAQ85241.1| glutamate/aspartate transport system permease protein gltj [Photorhabdus asymbiotica] Length = 246 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 101/180 (56%), Gaps = 14/180 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L A VT+ ++ +++I+ I G ++R + I+S I YV +FR PL+VQ F+ Sbjct: 25 LIAGFQVTIALSICAWIIAFIAGSLFGILRTV-PNKILSGIGTCYVELFRNVPLIVQFFI 83 Query: 77 IFYGLPH-----IGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P I + F + F++ + L L +A + E +R++I S+P+GQ Sbjct: 84 WYLVVPELLPEKISLWFKTELDPNIQFFISSTVCLGLFTAARMCEQVRAAIQSLPRGQKA 143 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+GLT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 144 AGLAMGLTLPQTYRYVLLPNAYRIIIPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 203 >gi|254250620|ref|ZP_04943939.1| ABC-type arginine/histidine transport system, permease component [Burkholderia cenocepacia PC184] gi|124879754|gb|EAY67110.1| ABC-type arginine/histidine transport system, permease component [Burkholderia cenocepacia PC184] Length = 440 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 46/137 (33%), Positives = 82/137 (59%), Gaps = 6/137 (4%) Query: 86 IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTI 145 ++ D+F I++L++N SAY++ I+R +I +P G+ +A +A G+TR Q +R I+ P+ Sbjct: 281 LLRDAFWYAIVALSVNESAYVATILRGAIAGVPAGEIEAGHAYGMTRLQVLRRIVGPRAW 340 Query: 146 TTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPLIIYCELAFVYLIL 202 + L+ E I +LKST +AST+T+ ++ TA R+ T Y+PL A VY++L Sbjct: 341 RLALPALTGEAILLLKSTVLASTVTVFDVMGTANRLRFETLRVYEPL---AGAAIVYVVL 397 Query: 203 TSFCYIIQIKIESSVTQ 219 + I ++E + + Sbjct: 398 VALLTIPAARLEQRINR 414 >gi|317178530|dbj|BAJ56318.1| glutamine ABC transporter, permease protein [Helicobacter pylori F30] Length = 217 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 101/187 (54%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + + S P + + +TL I+ ++SL++GF A+I ++F IS I++ Sbjct: 1 MALDW-DFMFHSIPAF-FKGLELTLYISFFGILLSLLVGFLCAII-LYFKTHFISPIVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QKESALSLGFSPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQ 187 + Y+ Sbjct: 176 FIGIYYK 182 >gi|307704348|ref|ZP_07641265.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK597] gi|307622108|gb|EFO01128.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK597] Length = 225 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 89/157 (56%), Gaps = 6/157 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + TL +A SF++++ +G + I+ ++ +V ++ TPLLVQ ++ Sbjct: 18 FNGFLFTLALAIGSFILAMFLGILFGAMSTS-KRPILRILARIFVEFYQNTPLLVQFVIV 76 Query: 78 FYGLP----HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 FYGLP HI I+ + ++ + L AYI+E+IRS I SIP GQ +A+ + G T Sbjct: 77 FYGLPLISDHI-IMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYI 135 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +R IILPQ PL+++ ++++K+TS + I+ Sbjct: 136 SAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIIS 172 >gi|53722004|ref|YP_110989.1| histidine transport system permease protein [Burkholderia pseudomallei K96243] gi|67639787|ref|ZP_00438621.1| histidine transport system permease protein HisQ [Burkholderia mallei GB8 horse 4] gi|77358792|ref|YP_338462.1| histidine ABC transporter, permease protein [Burkholderia mallei ATCC 23344] gi|121597350|ref|YP_989821.1| histidine ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|124382545|ref|YP_001024299.1| histidine ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126447794|ref|YP_001078281.1| histidine ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|126456343|ref|YP_001075390.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia pseudomallei 1106a] gi|134278817|ref|ZP_01765530.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 305] gi|167002834|ref|ZP_02268624.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei PRL-20] gi|167723384|ref|ZP_02406620.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei DM98] gi|167742355|ref|ZP_02415129.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 14] gi|167819526|ref|ZP_02451206.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 91] gi|167827899|ref|ZP_02459370.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 9] gi|167849366|ref|ZP_02474874.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei B7210] gi|167906309|ref|ZP_02493514.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei NCTC 13177] gi|226197595|ref|ZP_03793170.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei Pakistan 9] gi|237510321|ref|ZP_04523036.1| histidine transport system permease protein HisQ [Burkholderia pseudomallei MSHR346] gi|242311448|ref|ZP_04810465.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 1106b] gi|254174566|ref|ZP_04881228.1| histidine ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|254183461|ref|ZP_04890053.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 1655] gi|254190089|ref|ZP_04896598.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei Pasteur 52237] gi|254193051|ref|ZP_04899486.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei S13] gi|254200693|ref|ZP_04907058.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei FMH] gi|254204668|ref|ZP_04911021.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei JHU] gi|254264122|ref|ZP_04954987.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 1710a] gi|254300362|ref|ZP_04967808.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 406e] gi|254356910|ref|ZP_04973185.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei 2002721280] gi|52212418|emb|CAH38443.1| histidine transport system permease protein [Burkholderia pseudomallei K96243] gi|66967590|gb|AAY59147.1| histidine ABC transporter, permease protein [Burkholderia mallei ATCC 23344] gi|121225148|gb|ABM48679.1| histidine ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|124290565|gb|ABM99834.1| histidine ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126230111|gb|ABN93524.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 1106a] gi|126240648|gb|ABO03760.1| histidine ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|134249236|gb|EBA49317.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 305] gi|147748305|gb|EDK55380.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei FMH] gi|147754254|gb|EDK61318.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei JHU] gi|148025937|gb|EDK84060.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei 2002721280] gi|157810178|gb|EDO87348.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 406e] gi|157937766|gb|EDO93436.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei Pasteur 52237] gi|160695612|gb|EDP85582.1| histidine ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|169649805|gb|EDS82498.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei S13] gi|184213994|gb|EDU11037.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 1655] gi|225930204|gb|EEH26216.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei Pakistan 9] gi|235002526|gb|EEP51950.1| histidine transport system permease protein HisQ [Burkholderia pseudomallei MSHR346] gi|238520391|gb|EEP83851.1| histidine transport system permease protein HisQ [Burkholderia mallei GB8 horse 4] gi|242134687|gb|EES21090.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 1106b] gi|243061529|gb|EES43715.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei PRL-20] gi|254215124|gb|EET04509.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 1710a] Length = 229 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 53/228 (23%), Positives = 109/228 (47%), Gaps = 12/228 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 ++ F LL+A + T+ +A +S SL++G A ++ S+ ++ + FY + R Sbjct: 1 MLFQGFGPLLWAGTIETVKLAVLSLAASLVLGLAGAAAKLS-SNRALASVGTFYTTLIRA 59 Query: 68 TPLLVQLFVIFYG-----------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 P LV + ++FYG L I D FVA I++L + AY +E R + ++ Sbjct: 60 VPDLVLMLLLFYGIQILLNDVTDMLGAEQIDIDPFVAGIVTLGFIYGAYFTETFRGAFLA 119 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ +A +A G+ + I+ Q + + + + + ++K+T++ S I + ++ + Sbjct: 120 VPRGQLEAGFAYGMGAWRVFARIMFAQMMRFALPGIGNNWQVLVKATALVSIIGLADVVK 179 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 AQ +T +YL +T+ ++ + +E + V Sbjct: 180 AAQDAGKSTLNFFFFTLAAGAIYLAITTLSNLVLMYLEKRYSAGVRRV 227 >gi|15600347|ref|NP_253841.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|107104254|ref|ZP_01368172.1| hypothetical protein PaerPA_01005328 [Pseudomonas aeruginosa PACS2] gi|116053301|ref|YP_793625.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|218894254|ref|YP_002443123.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254238143|ref|ZP_04931466.1| hypothetical protein PACG_04265 [Pseudomonas aeruginosa C3719] gi|9951455|gb|AAG08539.1|AE004928_5 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|115588522|gb|ABJ14537.1| putative amino acid ABC transporter, permease protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126170074|gb|EAZ55585.1| hypothetical protein PACG_04265 [Pseudomonas aeruginosa C3719] gi|218774482|emb|CAW30299.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 231 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 11/154 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIGIVFDS-------FVAIIISLTLNFSAYISEI 109 Y I RG P + + +I++G L +G +F F A ++L L F AY +E+ Sbjct: 55 YTTIVRGVPETLWVLMIYFGTVSGLNALGDLFGKPDLALSPFAAGTLALGLCFGAYATEV 114 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +++SIP+G +A A+GL+ + I+LPQ + L + ++ +LK T++ S I Sbjct: 115 FRGALLSIPRGHREAGQALGLSPGRIFWRIVLPQIWRVALPGLGNLYLILLKDTALVSLI 174 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 T+ EI + AQ + T +P Y A +YL LT Sbjct: 175 TLDEIMRKAQVASNATKEPFTFYMTAAAIYLSLT 208 >gi|167922530|ref|ZP_02509621.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei BCC215] Length = 229 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 107/219 (48%), Gaps = 12/219 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 ++ F LL+A + T+ +A +S SL++G A ++ S+ ++ + FY + R Sbjct: 1 MLFQGFGPLLWAGTIETVKLAVLSLAASLVLGLAGAAAKLS-SNRALASVGTFYTTLIRA 59 Query: 68 TPLLVQLFVIFYG-----------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 P LV + ++FYG L I D FVA I++L + AY +E R + ++ Sbjct: 60 VPDLVLMLLLFYGIQVLLNDVTDMLGAEQIDIDPFVAGIVTLGFIYGAYFTETFRGAFLA 119 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ +A +A G+ + I+ Q + + + + + ++K+T++ S I + ++ + Sbjct: 120 VPRGQLEAGFAYGMGAWRVFARIMFAQMMRFALPGIGNNWQVLVKATALVSIIGLADVVK 179 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 AQ +T +YL +T+ ++ + +E Sbjct: 180 AAQDAGKSTLNFFFFTLAAGAIYLAITTLSNLVLMYLEK 218 >gi|77457436|ref|YP_346941.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77381439|gb|ABA72952.1| amino acid ABC transporter membrane protein 1, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 242 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 87/165 (52%), Gaps = 15/165 (9%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGL-------------PHIGIVFDSFVAIIISLT 99 ++ L Y + RG P LV + +IFY L +I I D F A +++L Sbjct: 58 LLRLPAQLYTTLIRGVPDLVLMLLIFYSLQTWLTTLTDYLEWEYIEI--DPFSAGVLTLG 115 Query: 100 LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISI 159 + AY +E R +I+++P+GQ +A+ A GL R Q R ++ PQ + + + + ++ + Sbjct: 116 FIYGAYFTETFRGAILAVPRGQVEAATAYGLKRGQRFRFVVFPQMMRFALPGIGNNWMVM 175 Query: 160 LKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 LK+T++ S I + ++ + AQ +TYQ A +YL++TS Sbjct: 176 LKATALVSIIGLADLVKAAQDAGKSTYQLFYFLVLAALIYLLITS 220 >gi|115358613|ref|YP_775751.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria AMMD] gi|115283901|gb|ABI89417.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Burkholderia ambifaria AMMD] Length = 594 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 68/232 (29%), Positives = 120/232 (51%), Gaps = 30/232 (12%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EWF P +L + + TL + + V +G F+A+ R+ S +++ +VW Sbjct: 67 EWF-----LSPPVL-SGLARTLVLTLLGAVFGFALGAFVALARLSRS-RLLAASAWTFVW 119 Query: 64 IFRGTPLLVQLFV----------IFYGLPHIGIV-FDS--------FVAIIISLTLNFSA 104 +FR PL+V L + + G+P IV FD+ F+A ++ LTLN +A Sbjct: 120 LFRSIPLIVLLLILNNLGYLYEHVRLGVPFTDIVWFDTPTTDLISPFLAAVLGLTLNHAA 179 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 + +E+IR I+++ +GQ +A+ A+GL R + I+LPQ + ++ IS+ K TS Sbjct: 180 FSAEVIRGGILAVDQGQLEAAAALGLPRGRQTTRIVLPQAMRAILPTAFNDLISLAKGTS 239 Query: 165 VASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 + + +PE+F T Q I + PL++ + YLI+ + IQ+++E Sbjct: 240 MVYVLAMPELFYTVQVIYRRNLEVIPLLMVATV--WYLIILTVLSAIQVQVE 289 >gi|218133963|ref|ZP_03462767.1| hypothetical protein BACPEC_01852 [Bacteroides pectinophilus ATCC 43243] gi|217991338|gb|EEC57344.1| hypothetical protein BACPEC_01852 [Bacteroides pectinophilus ATCC 43243] Length = 230 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 14/197 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHF--------YVWIFRGTPLL 71 +TL +A I +I ++GF I VI +I D I I+ YV +FR TP++ Sbjct: 8 ITLYVAIIGTIIGFLLGFLIGVIEDVQINREDNIFKKIIIKLVKIIFAVYVEVFRDTPMI 67 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 VQ VI+YG+ G A I+ LN AY++E +R+ I SI GQ + + A+G++ Sbjct: 68 VQAMVIYYGIRLAGGSISPIPAGILVTFLNTGAYMAETVRAGIKSIDVGQREGALALGMS 127 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 + + +I+PQ +++ F++ LK TSV + I + E+F A+ + Y+ Sbjct: 128 PLKAMVVVIIPQAFRNIIPEMANMFLTNLKMTSVLNVIGVSELFLVAKTTGAIYYRYFEA 187 Query: 192 YCELAFVYLILTSFCYI 208 Y +A ++ +L C+I Sbjct: 188 YLLIAVIFFVL---CFI 201 >gi|209543096|ref|YP_002275325.1| polar amino acid ABC transporter inner membrane subunit [Gluconacetobacter diazotrophicus PAl 5] gi|209530773|gb|ACI50710.1| polar amino acid ABC transporter, inner membrane subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 219 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 81/143 (56%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I TP L Q+F IFY LP +G++ F ++ I + LN +AY+++I+ + + +P Sbjct: 59 YSTIMTNTPQLSQIFAIFYCLPLLGVMVSPFASVFIGMALNAAAYLADIVTTGLGRVPPL 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 DA+ ++GLTR+Q +I P + T A L++ F ++ +S+AS + ++ A Sbjct: 119 YHDAAASLGLTRRQAYMRVIFPHALQTMAPALANHFQIMILGSSMASIFGVEDLTGRAYD 178 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + STT++ L + +Y +L+ Sbjct: 179 VGSTTFRILEVMLVAGVLYALLS 201 >gi|83721356|ref|YP_441444.1| amino acid ABC transporter permease [Burkholderia thailandensis E264] gi|167583162|ref|ZP_02376036.1| histidine transport system permease protein [Burkholderia thailandensis TXDOH] gi|167618322|ref|ZP_02386953.1| histidine transport system permease protein [Burkholderia thailandensis Bt4] gi|83655181|gb|ABC39244.1| amino acid ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 237 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 17/211 (8%) Query: 5 WFN-LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W N L D + + + +TL + +S I + +AV R+ + + Y + Sbjct: 9 WRNYLYTDGYR---FTGLAITLWLLVVSIGIGFCLSVPLAVARVSKKKWLAGAVW-LYTY 64 Query: 64 IFRGTPLLVQLFVIFYGL---------PHIGIVF-DSFVAIIISLTLNFSAYISEIIRSS 113 +FRGTPL VQL + + GL P + F D +++ TLN AY +EI + Sbjct: 65 VFRGTPLYVQLLLCYTGLYSLQAVRGTPMLDAFFRDGMNCTLLAFTLNTCAYTTEIFAGA 124 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIP 172 I S G+ +A+ A G++ R I+LP + A+PL S+E I +L +T+VA T T+P Sbjct: 125 IKSTSYGEIEAARAYGMSTFTLYRRIVLPSALR-RALPLYSNEVILMLHATTVAFTATVP 183 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +I + A+ + S TY + A +YL ++ Sbjct: 184 DILKIARDVNSATYMSFHAFGIAALLYLAIS 214 >gi|313891432|ref|ZP_07825048.1| ABC transporter, permease protein [Dialister microaerophilus UPII 345-E] gi|313120207|gb|EFR43383.1| ABC transporter, permease protein [Dialister microaerophilus UPII 345-E] Length = 229 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 97/187 (51%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQL-LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M NL+ + L L + TL I+ +S S I+G F+ +I + + I L+ Sbjct: 1 MGLSELNLLFEGVNGLRLLQGLRTTLAISLLSVAGSCILGLFVGLI-MTLKNPFIQLLSK 59 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 FY+ R P LV LF+ ++G+ I F A + L A + +++RS++ SIP Sbjct: 60 FYLEFMRIMPQLVLLFIAYFGIAKAFNIHISGFTASLTVFILWGMAEMGDLVRSAVESIP 119 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 K Q++++ A+G ++ Q R II+PQ + P + F I+K+TS+ I + E+ +T Sbjct: 120 KNQYESAAALGFSKFQMYRFIIIPQAVGFLLPPAINLFTRIIKTTSLVVMIGVVEVLKTG 179 Query: 179 QRIVSTT 185 Q+++ Sbjct: 180 QQLIEAN 186 >gi|304395133|ref|ZP_07377017.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304357386|gb|EFM21749.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 308 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 93/174 (53%), Gaps = 21/174 (12%) Query: 61 YVWIFRGTPLLVQLFVIFY----------GLPHIGI---------VFDSFVAIIISLTLN 101 Y+W+FR PL+V L +++ G+P G+ V F A +I LTL Sbjct: 98 YIWLFRSLPLIVVLIILYNFSYLYDTLSIGIPFTGLSWGAYQTINVLGQFQAAVIGLTLV 157 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS-SEFISIL 160 +AY +EIIR I+ + GQ +A+ A+GL+ + IILPQ + + +P++ +E IS+ Sbjct: 158 QAAYSAEIIRGGILGVDHGQVEAASALGLSATRRTFRIILPQAL-RAIIPVAFNEIISLA 216 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 K TSV + +PE+F T Q I + + + + A YLI+T+ +IQ E Sbjct: 217 KGTSVVYVLAMPELFYTIQMIYNRNQEVIPLLMVGAAWYLIITTVLSVIQYNAE 270 >gi|328466382|gb|EGF37534.1| polar amino acid transport system permease protein [Lactobacillus helveticus MTCC 5463] Length = 167 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 70/130 (53%) Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 M YV + R TPLL+QLF ++Y P IGI + V II L AY++E I Sbjct: 1 MTAYVELARNTPLLIQLFFLYYAFPVIGIKMSAEVCGIIGLIFLGGAYMAEGFTGGFNGI 60 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 Q ++ A+G++R Q R+++ PQ S L++ I ++K TS+ S I IPE+ T Sbjct: 61 STSQINSGKALGMSRFQLARYVVFPQGFALSLPALTANIIFLIKETSIFSVIAIPELTNT 120 Query: 178 AQRIVSTTYQ 187 A ++ Y+ Sbjct: 121 ALDLIGMYYR 130 >gi|317405102|gb|EFV85448.1| amino acids ABC transporter [Achromobacter xylosoxidans C54] Length = 229 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 113/206 (54%), Gaps = 17/206 (8%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTIISLI 57 W L++ +P + +TL +A +SL + IA+ R+ S T+++++ Sbjct: 9 WPTLLVGQYPNGPLGGLALTLILALCGLALSLPLALAIALARVSPFGWLRVASKTLVNVV 68 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 RG PLL+ +F ++ +P + G V F +I +L + SAY+SE+IRS I + Sbjct: 69 --------RGMPLLMLIFWAYFVIPKLTGQVISGFWTLIAALVVYESAYLSEVIRSGIEA 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ +AS ++G+ T+R ++LPQ + ++S+F+S +K TS+ I++ E+ Sbjct: 121 VPRGQIEASRSLGVGYWTTMRRVVLPQALFNVLPSMTSQFVSTIKETSLGYVISVNELTF 180 Query: 177 TAQRIVSTTY-QPLIIYCELAFVYLI 201 A ++ + +PL ++ LA +Y + Sbjct: 181 AANQVNNLVLTKPLQVFGILAIIYFL 206 >gi|260769494|ref|ZP_05878427.1| amino acid ABC transporter permease protein 3-TM region,His/Glu/Gln/Arg/opine [Vibrio furnissii CIP 102972] gi|260614832|gb|EEX40018.1| amino acid ABC transporter permease protein 3-TM region,His/Glu/Gln/Arg/opine [Vibrio furnissii CIP 102972] Length = 238 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 14/216 (6%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + L + +TL +A + + +++G +A + I Y + RG P L Sbjct: 13 GWGDELLKGLAITLGLALCALPVGMVLGTGVAALSIS-KHKGHRWFATVYTTVLRGLPEL 71 Query: 72 VQLFVIFYGL------------PHIGI-VFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 + LF+I++G+ P G + F A +I+L L FS Y +E++R + ++ Sbjct: 72 LTLFIIYHGVGLLINKTLKWFDPSNGFFELNPFGAGVIALGLVFSGYAAEVLRGAWKAMD 131 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KGQ +A Y++ + R Q I PQ + + L + +I++LK T++ S I + ++ + A Sbjct: 132 KGQREAGYSLAMGRGQIFWLIERPQLLRLALPGLGNLWINLLKDTALVSVIALDDLMRAA 191 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 V T +P + Y + Y + C + +E Sbjct: 192 NIAVGATKKPFLFYLTVCLAYWAVCVCCERVLAAME 227 >gi|255318801|ref|ZP_05360027.1| polar amino acid ABC transporter, inner membrane subunit [Acinetobacter radioresistens SK82] gi|262378935|ref|ZP_06072092.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Acinetobacter radioresistens SH164] gi|255304057|gb|EET83248.1| polar amino acid ABC transporter, inner membrane subunit [Acinetobacter radioresistens SK82] gi|262300220|gb|EEY88132.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Acinetobacter radioresistens SH164] Length = 227 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 103/186 (55%), Gaps = 14/186 (7%) Query: 4 EWFNLIID----SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 EW + S P L Y + +TL + CI+ + ++IG +A++R+ S I++L+ Sbjct: 2 EWLTSFLQDLQASGPALWYG-MTITLKVVCIATLGGILIGTLLALMRLS-SFRILNLVAQ 59 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHI-----G--IVFD-SFVAIIISLTLNFSAYISEIIR 111 YV +FR PLL+ L ++ +P I G + D + V+ I++ L +AY SEI+R Sbjct: 60 AYVNLFRSIPLLLVLMWFYFAVPFIYTTITGRFLTIDTALVSSIVAFMLFEAAYFSEIVR 119 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + I SIP+GQ A+YA+G+T Q +R ++LPQ L + I + + +++ I + Sbjct: 120 AGIQSIPRGQSAAAYALGMTYSQNMRLVVLPQAFRKMTPLLLQQTIILFQDSTMVYAIGL 179 Query: 172 PEIFQT 177 + F++ Sbjct: 180 LDFFRS 185 >gi|167581196|ref|ZP_02374070.1| histidine transport system permease protein [Burkholderia thailandensis TXDOH] Length = 237 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S + +AV R+ + +S + Y ++FRGTPL VQL +I+ Sbjct: 21 SGLAVTLWLLVASLGFGFVCAVPLAVARVS-KNRWLSTPVRVYTYVFRGTPLYVQLLLIY 79 Query: 79 YGLPHIGIVFD----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D I++ LN AY +EI +I +I G+ +A+ A Sbjct: 80 TGMYSLAFVRDHAFLDTFFRSGMNCAILAFALNTCAYTTEIFAGAIRAIAHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G++ R +ILP ++ A+PL S+E I +L +T+VA T T+P+I + A+ S TY Sbjct: 140 GMSPFTMYRRVILPSSLR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYM 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL ++ Sbjct: 199 AFQSFGIAALIYLAVS 214 >gi|90409068|ref|ZP_01217193.1| amino acid ABC transporter, permease protein [Psychromonas sp. CNPT3] gi|90309825|gb|EAS37985.1| amino acid ABC transporter, permease protein [Psychromonas sp. CNPT3] Length = 359 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 56/158 (35%), Positives = 87/158 (55%), Gaps = 18/158 (11%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIR-------IFFSDTIISLIMHFYVWIFRGTPL 70 + +++TL +A + ++S IG +A+ R FF T I I RG PL Sbjct: 151 WGGLMLTLIVAAVGIIVSFPIGIVLALGRQSDLPILKFFCITFIEFI--------RGVPL 202 Query: 71 LVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + LF+ LP H GI FD + +I +TL SAYI+E+IR + +IPKGQ++A+ + Sbjct: 203 ITILFMASVILPLFFHDGIDFDKLLRALIGITLFQSAYIAEVIRGGLQAIPKGQYEAAKS 262 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 +GL+ + + IILPQ + S L FIS+ K T++ Sbjct: 263 LGLSYWKGMLLIILPQALKISIPNLVGSFISLFKDTTL 300 >gi|167914634|ref|ZP_02501725.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 112] gi|217419115|ref|ZP_03450622.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 576] gi|217398419|gb|EEC38434.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 576] Length = 229 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 107/219 (48%), Gaps = 12/219 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 ++ F LL+A + T+ +A +S SL++G A ++ S+ ++ + FY + R Sbjct: 1 MLFQGFGPLLWAGTIETVKLAVLSLAASLVLGLAGAAAKLS-SNRALASVGTFYTTLIRA 59 Query: 68 TPLLVQLFVIFYG-----------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 P LV + ++FYG L I D FVA I++L + AY +E R + ++ Sbjct: 60 VPDLVLMLLLFYGIQILLNDVTDMLGAEQIDIDPFVAGIVTLGFIYGAYFTETFRGAFLA 119 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ +A +A G+ + I+ Q + + + + + ++K+T++ S I + ++ + Sbjct: 120 VPRGQLEAGFAYGMGAWRVFARIMFAQMMRFALPGIGNNWQVLVKATALVSIIGLADVVK 179 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 AQ +T +YL +T+ ++ + +E Sbjct: 180 AAQDAGKSTLNFFFFTLAAGAIYLAITTLSNLVLMYLEK 218 >gi|330957763|gb|EGH58023.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 248 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 52/158 (32%), Positives = 89/158 (56%), Gaps = 15/158 (9%) Query: 36 LIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI----------- 84 L++G + V+R + ++S I YV IFR PLLVQLF+ ++ +P + Sbjct: 44 LLLGSVLGVMRTV-PNRLVSGIATVYVEIFRNVPLLVQLFIWYFLVPDLLPENIQEWYKQ 102 Query: 85 --GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 +F+++++ L L +A + E +R+ I ++PKGQ A+ A+G Q +++LP Sbjct: 103 DLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYCNVLLP 162 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 Q PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 163 QAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|330807874|ref|YP_004352336.1| histidine ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375982|gb|AEA67332.1| histidine ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 242 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 15/159 (9%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGL-------------PHIGIVFDSFVAIIISLTLNFSAY 105 Y + RG P LV + +IFY L +I I D F A +I+L + AY Sbjct: 64 QLYTTLIRGVPDLVLMLLIFYSLQTWLTSLTDFMEWEYIEI--DPFGAGVITLGFIYGAY 121 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 +E R +I+++P+GQ +A+ A GL R Q R ++ PQ + + + + ++ +LK+T++ Sbjct: 122 FTETFRGAILAVPRGQVEAATAYGLKRGQRFRFVVFPQMMRFALPGIGNNWMVMLKATAL 181 Query: 166 ASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 S I + ++ + AQ +TYQ A +YL++TS Sbjct: 182 VSIIGLADLVKAAQDAGKSTYQLFYFLVLAALIYLLITS 220 >gi|218670451|ref|ZP_03520122.1| ABC transporter, membrane spanning protein [Rhizobium etli GR56] Length = 198 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 79/143 (55%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TP L+QLF +++GLP +G+ A +++ +N AY EIIR+ I + P+G Sbjct: 35 YVELIRNTPFLIQLFFVYFGLPQLGLRLSEIEAANLAMIVNLGAYSCEIIRAGIQATPRG 94 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A ++ +T QT RH+++ + LSS+ + ++ ++V S + ++ Sbjct: 95 QFEAGASLAMTPFQTFRHVVVVPALQRIWPALSSQVVIVMLGSAVVSQVAAQDLSFATNF 154 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 I S T++ Y VYL+L Sbjct: 155 IQSRTFRSFEAYFFSTLVYLVLA 177 >gi|270262831|ref|ZP_06191102.1| transporter [Serratia odorifera 4Rx13] gi|270043515|gb|EFA16608.1| transporter [Serratia odorifera 4Rx13] Length = 228 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 12/207 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ + QL++ +VTL +A S +++L+IG A ++ + ++S + Y + RG Sbjct: 1 MLQGYSQLIFEGALVTLELALSSVLLALVIGLIGAGGKLS-HNRLLSTLFGAYTTLIRGV 59 Query: 69 PLLVQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 P LV + +IFYGL +G I D A II+L + AY +E R + +++ Sbjct: 60 PDLVLMLLIFYGLQIALNNLTELLGFSQIDIDPLSAGIITLGFIYGAYFTETFRGAYMAV 119 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKGQ +A+ A G + Q R I+ P + + + + + ILK+T++ S + + ++ + Sbjct: 120 PKGQIEAATAYGFSGSQIFRRILFPAMMRFALPGIGNNWQVILKATALVSILGLNDVVKA 179 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTS 204 Q TYQP VYLI T+ Sbjct: 180 TQLAGKGTYQPFFFAIVAGVVYLIFTT 206 >gi|171057832|ref|YP_001790181.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix cholodnii SP-6] gi|170775277|gb|ACB33416.1| polar amino acid ABC transporter, inner membrane subunit [Leptothrix cholodnii SP-6] Length = 250 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI---------RIFFSD 51 M W I+ + L I++T+ + ++ + L +G +I R + Sbjct: 1 MDLRW--EILAGYGPLFVEGILMTIKLTLVAIGVGLALGVLFGLISSSRDAPRPRSAAAV 58 Query: 52 TIISLIMHF---YVWIFRGTPLLVQLFVIFYGL------PHIGIVF------------DS 90 + L+ F YV FRGTPL VQ+ ++ + L P G + + Sbjct: 59 LGMKLLRGFTVGYVTFFRGTPLFVQILLVHFALMPALIHPDHGWLLAGESARTFRQEHGA 118 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 F + ++L+LN AYISEI R+ I SI +GQ A+Y++G T Q++R ++LPQ Sbjct: 119 FFSGCLALSLNAGAYISEIFRAGIQSIHRGQTQAAYSLGFTHAQSMRFVVLPQAFRRMVP 178 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 L +E ++++K +S+ S I + E+ A R V+ Y Sbjct: 179 ALVNEGVTLIKDSSLVSAIGLAEL-ALAARTVAGAY 213 >gi|170736176|ref|YP_001777436.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169818364|gb|ACA92946.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 237 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 95/182 (52%), Gaps = 13/182 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-----LPHI 84 V+S+ +GF +AV I S+ IS + Y ++FRGTPL VQL + + G L H Sbjct: 31 VVSIALGFALAVPLAIARASSNRWISGPVWLYTYVFRGTPLYVQLLMCYTGIYSLQLVHD 90 Query: 85 GIVFDSFVAIIISLTL-----NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 ++ D+F ++ TL N AY +EI +I + G+ +A A G++R + I Sbjct: 91 HVLLDTFFRNAMNCTLLAFVLNECAYATEIFAGAIKATSAGEVEAGMAYGMSRFKLHTRI 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILP + S S+E I +L +T++A T T+P+I + + + S TY Y A +Y Sbjct: 151 ILPSALRRSLPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYMSFQAYGIAAVLY 210 Query: 200 LI 201 + Sbjct: 211 AV 212 >gi|108563533|ref|YP_627849.1| glutamine ABC transporter, permease protein [Helicobacter pylori HPAG1] gi|107837306|gb|ABF85175.1| glutamine ABC transporter, permease protein [Helicobacter pylori HPAG1] Length = 217 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 100/187 (53%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + + S P L + +TL I+ ++SL++GF A+I ++F IS I++ Sbjct: 1 MALDW-DFMFHSVPMFL-KGLELTLYISFFGILLSLLVGFLCAII-LYFKTRFISPIVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQLFFLYYGLNEIGL--STLECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QKESALSLGFGPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQ 187 + Y+ Sbjct: 176 FIGIYYK 182 >gi|37525532|ref|NP_928876.1| arginine transporter permease subunit ArtM [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784960|emb|CAE13878.1| Arginine transport system permease protein artM [Photorhabdus luminescens subsp. laumondii TTO1] Length = 222 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 86/144 (59%), Gaps = 11/144 (7%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNF 102 +++ ++ Y+ +F GTPLLVQ F+I+YG P I ++ + ++ +++L LN Sbjct: 43 VLTQLVKAYITLFTGTPLLVQFFLIYYGPGQFPAIKAYPWLWQLLSEPWLCAMVTLALNS 102 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY + + ++ +IP GQW + A+G+++ Q+++ I+LP + S+E + I KS Sbjct: 103 AAYSTLLFYGAVKAIPAGQWQSCQALGMSKAQSMQ-ILLPYAFKRALSSYSNEVVLIFKS 161 Query: 163 TSVASTITIPEIFQTAQRIVSTTY 186 TS+ASTIT+ E+ +Q + Y Sbjct: 162 TSLASTITLLEVMGYSQLLFGRNY 185 >gi|163791027|ref|ZP_02185448.1| putative ABC-type amino-acid transporter permease protein [Carnobacterium sp. AT7] gi|159873672|gb|EDP67755.1| putative ABC-type amino-acid transporter permease protein [Carnobacterium sp. AT7] Length = 219 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 118/216 (54%), Gaps = 13/216 (6%) Query: 14 PQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 P LL+ + +L I+ ++S+++G + ++R + I+ FY+ +FR TPLL Sbjct: 12 PNLLFLLDGLRTSLVISLCVIILSILLGTLLGLVR-NYEKKILGKFASFYIELFRNTPLL 70 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 + + + +P I+ +A L L +A ++EI+R + +IPKGQ++A+++ G + Sbjct: 71 LWMLGCAFLIPGSTILVKGSLA----LFLYTAAVVAEIVRGGLNAIPKGQFEAAHSQGFS 126 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI---VSTTYQP 188 QT+ +IILPQT L S+ I+ +K TS + + I E ++ Q I V+ T + Sbjct: 127 FFQTLLYIILPQTFKKIIPSLLSQVITTIKDTSFLAGLGIMEFTRSGQVILGKVTKTSEV 186 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 +IY LA VY I+ C+ + + + + +++ +V Sbjct: 187 FLIYGFLAVVYFII---CFTLSVLVRNWHEKNSGNV 219 >gi|205352682|ref|YP_002226483.1| ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272463|emb|CAR37352.1| putative ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326627749|gb|EGE34092.1| putative ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 215 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 99/186 (53%), Gaps = 1/186 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L I TL + F+ + + G +AV+R S + I+ V+I RG P+L+ +F+ Sbjct: 13 LLEGIGNTLLVTFTCFLSAFLFGLTVAVLR-RLSPLPLQKILDVLVFILRGVPILIAVFL 71 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GLP IGI VA+ +S+ L +Y++E+ R ++ + + + G+ + Q I Sbjct: 72 VYFGLPSIGIYVSPLVAMNLSVGLISGSYLAEVFRGALKLVEPYEITVAKVAGMRQLQVI 131 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +I LPQ + S + +EF S+LK+T A T+ I EI + A + + T L IY Sbjct: 132 INIELPQMLRFSVPGIINEFSSVLKATPFAYTVGIAEITKQAMSLTAITLNGLQIYTLAG 191 Query: 197 FVYLIL 202 +Y I+ Sbjct: 192 VLYFII 197 >gi|190893811|ref|YP_001980353.1| amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190699090|gb|ACE93175.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 271 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 57/190 (30%), Positives = 98/190 (51%), Gaps = 22/190 (11%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVI-FYGLPHI--------------GIVFDSFVA---- 93 ++ I FY+ I RG P+LV LF I F G P + GI V Sbjct: 80 VLRQIARFYIEIIRGIPILVLLFYIAFVGAPGLVSAYNFIITPLVPAGIAEPILVRDLSL 139 Query: 94 ---IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 II+L + +S++I+EI R+ S+ GQ +A+ ++GL+R + R ++ PQ I Sbjct: 140 MWRAIIALMIGYSSFIAEIFRAGFQSVDIGQIEAAKSLGLSRYRRFRLVVFPQAIRVIFP 199 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 PLS++F+S++K +S+ S + + +I Q + S +++ Y + ++YLILT + Sbjct: 200 PLSNDFVSMVKDSSLVSVLGVADITQMGKVYASGSFRFFETYSIVTYIYLILTIGLSLAL 259 Query: 211 IKIESSVTQH 220 +IE + Q Sbjct: 260 RRIEKKMKQK 269 >gi|319404357|emb|CBI77957.1| ABC transporter, permease protein [Bartonella rochalimae ATCC BAA-1498] Length = 221 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 107/194 (55%), Gaps = 13/194 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL +A S ++ L +G A + I + I+ I + +FRG P ++ LF ++YGL Sbjct: 9 MTLSLALCSIILGLPLGLMNATM-IQSNIRILKAIATLFSSVFRGLPEILTLFFVYYGLQ 67 Query: 83 H----------IGIVF--DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 + I I+F ++F+A +++ ++ F+A+ E+ ++ K Q++A+ +GL Sbjct: 68 NCIQAIFDFLNIDIIFSINAFIAGVLAFSMVFAAFSCEVWLAAFKMFDKSQYEAAQVLGL 127 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 +R T I+ PQ + + LS+ ++++LK TS+ STI++ ++ + + T +P++ Sbjct: 128 SRSTTFFRIVFPQLLHNALPGLSNNWLTLLKDTSLVSTISLLDLMRQTNLAATATNEPIL 187 Query: 191 IYCELAFVYLILTS 204 Y +YL+ ++ Sbjct: 188 FYLVACLLYLLFSA 201 >gi|219847286|ref|YP_002461719.1| polar amino acid ABC transporter inner membrane subunit [Chloroflexus aggregans DSM 9485] gi|219541545|gb|ACL23283.1| polar amino acid ABC transporter, inner membrane subunit [Chloroflexus aggregans DSM 9485] Length = 400 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 77/122 (63%), Gaps = 3/122 (2%) Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 V +SF A+++ L + + +I EI+RS I+++ KGQ +A+ A+GLT QT+R +ILPQ + Sbjct: 265 VTNSFAALLVGLVIYTAVFIGEIVRSGILAVSKGQREAARALGLTPGQTMRLVILPQALR 324 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL---ILT 203 PL+S+++++ K++S+A + P++F A I + T Q + + L YL +LT Sbjct: 325 VIIPPLTSQYLNLTKNSSLAIAVAYPDLFYVANTINNQTGQAVPVILMLMVSYLSVSLLT 384 Query: 204 SF 205 S Sbjct: 385 SL 386 >gi|90578868|ref|ZP_01234678.1| Putative arginine ABC transporter, permease protein [Vibrio angustum S14] gi|90439701|gb|EAS64882.1| Putative arginine ABC transporter, permease protein [Vibrio angustum S14] Length = 220 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 113/207 (54%), Gaps = 19/207 (9%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVW-------IFRGTPLLVQLFVIFYGLPHI--- 84 SL +G +A++ F+ +S F W + RG P L+ + IF+G I Sbjct: 9 SLAVGLVLAML---FAGGEMSR-FRFVAWPTTALVTVLRGLPELLIVLFIFFGSGQILFY 64 Query: 85 --G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 G I F++ +I+L+L F++Y ++ IR +I ++PKGQ +A+ A+G+++ +T II Sbjct: 65 ITGDYIEISPFLSGVIALSLIFASYAAQTIRGAIKAVPKGQREAASALGISKARTFVAII 124 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 +PQ I + L+++++ +LK T++ S I + ++ + AQ + T++ Y A VYL Sbjct: 125 IPQAIRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLSSAATHESFTWYATAAAVYL 184 Query: 201 ILTSFCYIIQIKIESSVT-QHTYSVDK 226 ++T I +I++ + Q S +K Sbjct: 185 VITLITQQIIKRIDAKYSVQEGSSNNK 211 >gi|78067202|ref|YP_369971.1| ABC amino acid transporter, inner membrane subunit [Burkholderia sp. 383] gi|77967947|gb|ABB09327.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia sp. 383] Length = 237 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 102/195 (52%), Gaps = 13/195 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL + +S + + +AV R+ +S + Y ++FRGTPL VQL + + Sbjct: 22 GVAITLWLLVVSIGLGFCLSIPLAVARVS-KKKWLSGAVWLYTYVFRGTPLYVQLLLCYT 80 Query: 80 GL---------PHIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 GL P + F D +++ TLN AY +EI +I + G+ +A+ A G Sbjct: 81 GLYSLQAVRGTPMLDAFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYG 140 Query: 130 LTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 ++ R +ILP + A+PL S+E I +L +T+VA T T+P+I + A+ + S TY Sbjct: 141 MSTFTMYRRVILPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMS 199 Query: 189 LIIYCELAFVYLILT 203 + A +YL+++ Sbjct: 200 FHAFGIAALLYLVIS 214 >gi|224437620|ref|ZP_03658573.1| putative ABC-type amino-acid transporter permease protein [Helicobacter cinaedi CCUG 18818] gi|313144071|ref|ZP_07806264.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818] gi|313129102|gb|EFR46719.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818] Length = 219 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 62/189 (32%), Positives = 98/189 (51%), Gaps = 11/189 (5%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 N+ ++ L + +TL +A + VIS+I+G F+A+ R + I + Y+ FR Sbjct: 3 NVFNETNFHFLLDGLYLTLMVAVATCVISIILGTFLAITRNY-GGRIARTLAAIYIETFR 61 Query: 67 GTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 TPLL+ + + LP D V I +L S+ ++EIIR + SIPKGQ++A+Y Sbjct: 62 NTPLLLWMLTAVFVLPSFFGRADPAVWGTIGFSLYTSSVMAEIIRGGLNSIPKGQFEAAY 121 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 + G ++ T+ +IILPQT L S+ I+ K TS + + I E+ TY Sbjct: 122 SQGFSQFFTLFYIILPQTFRKVIPSLLSQIITTFKDTSFLAGLQIAEL----------TY 171 Query: 187 QPLIIYCEL 195 Q II +L Sbjct: 172 QSKIILAQL 180 >gi|49081960|gb|AAT50380.1| PA5154 [synthetic construct] Length = 232 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 11/154 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIGIVFDS-------FVAIIISLTLNFSAYISEI 109 Y I RG P + + +I++G L +G +F F A ++L L F AY +E+ Sbjct: 55 YTTIVRGVPETLWVLMIYFGTVSGLNALGDLFGKPDLALSPFAAGTLALGLCFGAYATEV 114 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +++SIP+G +A A+GL+ + I+LPQ + L + ++ +LK T++ S I Sbjct: 115 FRGALLSIPRGHREAGQALGLSPGRIFWRIVLPQIWRVALPGLGNLYLILLKDTALVSLI 174 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 T+ EI + AQ + T +P Y A +YL LT Sbjct: 175 TLDEIMRKAQVASNATKEPFTFYMTAAAIYLSLT 208 >gi|330898592|gb|EGH30011.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Pseudomonas syringae pv. japonica str. M301072PT] Length = 232 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 96/182 (52%), Gaps = 13/182 (7%) Query: 35 SLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL---------P 82 S++IGF +++ I + + FY ++FRGTPL +QL + + G+ P Sbjct: 33 SIVIGFCVSIPLSIARVSGKRWVRWPVQFYTYLFRGTPLYIQLLICYTGIYSLAAVREQP 92 Query: 83 HIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + F D+ I++ TLN AY +EI +I S+ G+ +A+ A GLT + ++I+ Sbjct: 93 MLDAFFRDAMNCTILAFTLNTCAYTTEIFAGAIRSMAHGEVEAAKAYGLTGWKLYAYVIM 152 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 P + S S+E I +L ST+VA T T+P+I + A+ S T+ + A +YL Sbjct: 153 PSVLRRSLPYYSNEVILMLHSTTVAFTATVPDILKVARDANSATFMTFQSFGIAAVMYLT 212 Query: 202 LT 203 +T Sbjct: 213 VT 214 >gi|328956551|ref|YP_004373937.1| glutamine transport system permease protein GlnP [Carnobacterium sp. 17-4] gi|328672875|gb|AEB28921.1| glutamine transport system permease protein GlnP [Carnobacterium sp. 17-4] Length = 219 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 112/207 (54%), Gaps = 13/207 (6%) Query: 14 PQLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 P +L+ + TL I+ ++S++ G + +IR + I FY+ +FR TPLL Sbjct: 12 PNVLFLLDGLKTTLLISLCVVILSIVFGTLLGLIRNY-EKKFFGKIAGFYIELFRNTPLL 70 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 + + + +P I+ V I+L L +A ++EI+R + SIPKGQ++A+++ G + Sbjct: 71 LWMLGCAFLIPGSTIL----VKASIALFLYTAAVVAEIVRGGLNSIPKGQFEAAHSQGFS 126 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI---VSTTYQP 188 QT+ +IILPQT L S+ I+ +K TS + + I E ++ Q I V+ T + Sbjct: 127 FFQTLVYIILPQTFKKIIPSLLSQVITTIKDTSFLAGLGIMEFTRSGQVILGKVTKTSEV 186 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIES 215 +IY LA VY I+ C+ + + + + Sbjct: 187 FLIYGFLAVVYFII---CFALSVLVRN 210 >gi|331695544|ref|YP_004331783.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Pseudonocardia dioxanivorans CB1190] gi|326950233|gb|AEA23930.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Pseudonocardia dioxanivorans CB1190] Length = 218 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 98/185 (52%), Gaps = 4/185 (2%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++W N + P LL + VTL + +I+ +G +AV+ + +++ V Sbjct: 5 WDW-NFAGEIIPALLNG-LRVTLIATVLGSIIAFALGLVLAVLG--RGPRPVRIVVRAIV 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 R TPLLVQ++ +F+ LP G+V + I++L ++++ Y SE+ R+ I ++P+GQW Sbjct: 61 EFVRSTPLLVQVYFLFFVLPAFGVVLSALTVGILALGVHYATYTSEVYRAGIDAVPRGQW 120 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A+ L + ++LPQ I L + IS+ K T + I + +I A+ + Sbjct: 121 EAATALSLPTTRVWTGVVLPQAIPRVLPALGNYVISMFKETPLLIGIGVLDIVGQAREVG 180 Query: 183 STTYQ 187 +++ Sbjct: 181 GQSFR 185 >gi|208435063|ref|YP_002266729.1| glutamine ABC transporter, permease protein [Helicobacter pylori G27] gi|208432992|gb|ACI27863.1| glutamine ABC transporter, permease protein [Helicobacter pylori G27] Length = 217 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 106/201 (52%), Gaps = 5/201 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + + S P + + +TL I+ ++SL++GF A++ ++F IS +++ Sbjct: 1 MALDW-DFMFHSIPAF-FKGLELTLYISFFGILLSLLVGFLCAIV-LYFKTRFISPVVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QRESALSLGFSPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQPLIIYCELAFVYLI 201 + Y+ L+ YLI Sbjct: 176 FIGIYYKTTESLLMLSLTYLI 196 >gi|307637840|gb|ADN80290.1| Glutamine ABC transporter [Helicobacter pylori 908] gi|325996438|gb|ADZ51843.1| Glutamine ABC transporter, permease protein [Helicobacter pylori 2018] gi|325998027|gb|ADZ50235.1| Glutamine ABC transporter protein [Helicobacter pylori 2017] Length = 217 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 106/201 (52%), Gaps = 5/201 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + + S P L + +TL I+ ++SL++GF A++ ++F +S +++ Sbjct: 1 MALDW-DFMFHSIPMFL-KGLELTLYISFFGILLSLLVGFLCAIV-LYFKTRFLSPVVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QRESALSLGFGPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQPLIIYCELAFVYLI 201 ++ Y+ L+ YLI Sbjct: 176 LIGIYYKTTESLLMLSLTYLI 196 >gi|282897629|ref|ZP_06305629.1| Amino acid ABC transporter, permease protein, 3- TM region protein, His/Glu/Gln/Arg/opine [Raphidiopsis brookii D9] gi|281197552|gb|EFA72448.1| Amino acid ABC transporter, permease protein, 3- TM region protein, His/Glu/Gln/Arg/opine [Raphidiopsis brookii D9] Length = 313 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 114/224 (50%), Gaps = 33/224 (14%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTP 69 +S+ + L +V +L +A + +++ ++G + R+ SD ++ I YV IFR TP Sbjct: 73 ESYGRALAVGLVNSLRVATLGILLATVVGITAGIGRL--SDNWLVRNISLVYVEIFRNTP 130 Query: 70 LLVQL----FVIFYGLPH-------IGIVFDS-------------------FVAIIISLT 99 LL+QL F +F LP G+ + S F +++ LT Sbjct: 131 LLLQLLFWYFGVFLSLPKPENKISLFGLGYLSQNGIDLPTLTYQGVNLTPEFCTLLLGLT 190 Query: 100 LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISI 159 A+++EI+R+ I S+ +GQWDA ++GL +R II PQ + PL+S+++++ Sbjct: 191 FYTGAFVAEIVRAGIKSVSQGQWDAGLSLGLRSGLLMRLIIFPQALKLIVPPLTSQYLNL 250 Query: 160 LKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +K++S+A I P+++ A + T + + + L YL L+ Sbjct: 251 MKNSSLAIAIGYPDMYFVASTTFNQTGKAVEVMVLLMITYLTLS 294 >gi|84517034|ref|ZP_01004391.1| polar amino acid uptake family ABC transporter, permease protein [Loktanella vestfoldensis SKA53] gi|84509152|gb|EAQ05612.1| polar amino acid uptake family ABC transporter, permease protein [Loktanella vestfoldensis SKA53] Length = 263 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 59/225 (26%), Positives = 114/225 (50%), Gaps = 32/225 (14%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIAC-ISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M+++W D Q ++ + + L ++C I F +++ +G A F + + Sbjct: 33 MRWDWIARYHDLAVQGIWRTLWL-LGLSCLIGFALAVPLGLAQAAGPRFLAAPARAFCT- 90 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAI----------------IISLTLNFS 103 + RGTPLL+QL++I++G +G +F F I +++L+L+F+ Sbjct: 91 ----VIRGTPLLLQLWLIYFG---VGSLFPQFPWIRESELWPYLRQAWPYALLALSLSFA 143 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 Y E++R + S+ GQ +A+ ++G+ R R I PQ + + L E + LK+T Sbjct: 144 GYEGEVMRGAFKSVAGGQLEAARSMGMGRFAIFRRIWFPQALQRALPTLGGETVLQLKAT 203 Query: 164 SVASTITIPEIFQTAQRIVSTT---YQPLIIYCELAFVYLILTSF 205 + +TIT+ EI+ + R+ T Y+PL++ LA +Y+++ Sbjct: 204 PLVATITVIEIYAVSSRVRQDTFIIYEPLLL---LAVIYMVIAGL 245 >gi|260222061|emb|CBA31249.1| hypothetical protein Csp_C27600 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 226 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 9/195 (4%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 QLL A++ T+ +AC + V L+ G +A ++ + + + RG P + + Sbjct: 10 QLLQGALM-TVQLACAALVCGLVFGLVLAACQLS-RHAWLRRPVAVLTGVLRGVPEFLVV 67 Query: 75 FVIFYGLPH-IGIVFDS------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 V ++GL + I FDS F A ++SL L AY SE+ R S +++ +GQ +A+ + Sbjct: 68 LVCYFGLSNLINNHFDSAFDISPFFAGVVSLALVLGAYASEVFRGSFVALERGQLEAARS 127 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL+ QT + LPQ + + L + + S+LK TS+ S + + ++ + + ++Q Sbjct: 128 LGLSPVQTFFLVRLPQAWRIAILSLGNLWQSLLKDTSLVSVVGLEDLLKKSNMAAQASHQ 187 Query: 188 PLIIYCELAFVYLIL 202 P + A +Y L Sbjct: 188 PFLFLMAAAVMYFCL 202 >gi|117618047|ref|YP_855200.1| arginine transporter permease subunit ArtM [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559454|gb|ABK36402.1| arginine ABC transporter, permease protein ArtM [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 220 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 99/188 (52%), Gaps = 23/188 (12%) Query: 35 SLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGTPLLVQLFVIFYG---------LP 82 SL++G +A + + +++ ++ +V IF GTPLL+Q+F+I+YG P Sbjct: 22 SLLLGVLMAAAMTWVLERRIPVVTQLVQLWVLIFTGTPLLIQIFLIYYGPGQFAWLKEGP 81 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT----IRH 138 ++ + +++L N +AY + + + ++ +IP G+ +A A+G + QT +RH Sbjct: 82 LWPLLKQPWFCAVLALGFNTAAYSTRLFKGALDAIPAGEVEACRALGFSAGQTLWMKVRH 141 Query: 139 IILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 VP S+E I +LK +S+ASTITI ++ AQR+ + TY L ++ Sbjct: 142 A------ARRLVPAYSNEVILVLKGSSLASTITIMDVMGLAQRLNAQTYDTLAVFTVAGA 195 Query: 198 VYLILTSF 205 +YL + Sbjct: 196 LYLTMNGL 203 >gi|307702006|ref|ZP_07639014.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus mitis NCTC 12261] gi|307616651|gb|EFN95840.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus mitis NCTC 12261] Length = 266 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 30/224 (13%) Query: 9 IIDSFPQLLYAAIVVTLPIACI----SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 + D P+ IV LPI + + L++ A+++I I+ + F+V Sbjct: 30 VFDGIPR-----IVQQLPITIMLTIGGALFGLVLALLFAIVKIN-RVKILYPLQAFFVSF 83 Query: 65 FRGTPLLVQLFVIFYGLP--------HIGIVFDSFVAIIISLTL-----NFSAYISEIIR 111 +GTP+LVQL + +YG+P G F+ + + N +AY SE IR Sbjct: 84 LKGTPILVQLMLTYYGIPLALKALNQQWGTGFNINAIPAAAFAIVAFAFNEAAYASETIR 143 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++I+S+ G+ +A+ ++G+TR Q R +I+P + L + I + K TS+A + + Sbjct: 144 AAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKGTSLAFSAGV 203 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 E+F AQ + Y+ + +A VY +++ I IES Sbjct: 204 VEVFAQAQILGGADYRYFERFISVALVY-------WVVNIGIES 240 >gi|199599468|ref|ZP_03212860.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] gi|199589640|gb|EDY97754.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] Length = 488 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 97/181 (53%), Gaps = 2/181 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + T+ + ++ + ++G I + + + + I +++IFRG PL+V Sbjct: 286 LMGGLRETMVLTIVAIFFATLVGILIGFLGVI-PNKLCQGIATTFIYIFRGLPLMVLALF 344 Query: 77 IFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+ G+P IG +F+A I++LTLN AY + ++ I ++ GQ +A+ ++GL + Sbjct: 345 IYTGVPSLIGSKVPAFIAGIVTLTLNEGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKA 404 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R +ILPQ I ++FI LK TS+ S I + E+ QT + I++ + I+ + Sbjct: 405 MRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGLLELTQTGKIIIARNMEGFKIWTMV 464 Query: 196 A 196 A Sbjct: 465 A 465 >gi|330981547|gb|EGH79650.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 236 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 96/182 (52%), Gaps = 13/182 (7%) Query: 35 SLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL---------P 82 S++IGF +++ I + + FY ++FRGTPL +QL + + G+ P Sbjct: 33 SIVIGFCVSIPLSIARVSGKRWVRWPVQFYTYLFRGTPLYIQLLICYTGIYSLAAVREQP 92 Query: 83 HIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + F D+ I++ TLN AY +EI +I S+ G+ +A+ A GLT + ++I+ Sbjct: 93 MLDAFFRDAMNCTILAFTLNTCAYTTEIFAGAIRSMAHGEVEAAKAYGLTGWKLYAYVIM 152 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 P + S S+E I +L ST+VA T T+P+I + A+ S T+ + A +YL Sbjct: 153 PSVLRRSLPYYSNEVILMLHSTTVAFTATVPDILKVARDANSATFMTFQSFGIAAVMYLT 212 Query: 202 LT 203 +T Sbjct: 213 VT 214 >gi|330938796|gb|EGH42321.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] Length = 169 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 43/111 (38%), Positives = 72/111 (64%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 Y+ +F+GTPLL+QLF++F+G+ + + + A ++LTL SAY++EI R + SI Sbjct: 53 KLYIELFQGTPLLMQLFLVFFGVALMRLNISPWAAAALALTLFTSAYLAEIWRGCVESIS 112 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 KGQW+AS ++ LT + +R++ILPQ + + P + ++K T+V S I Sbjct: 113 KGQWEASASLALTPFEQMRYVILPQALRIAVAPTVGFSVQVVKGTAVTSII 163 >gi|89073558|ref|ZP_01160080.1| ABC-type arginine transport system, permease component [Photobacterium sp. SKA34] gi|89050585|gb|EAR56071.1| ABC-type arginine transport system, permease component [Photobacterium sp. SKA34] Length = 219 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 111/206 (53%), Gaps = 18/206 (8%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVW-------IFRGTPLLVQLFVIFYGLPHI--- 84 SL +G +A++ F+ +S F W + RG P L+ + IF+G + Sbjct: 9 SLAVGLVLAML---FAGGEMSR-FRFVAWPTTALVTVLRGLPELLIVLFIFFGSGQVLFY 64 Query: 85 --G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 G I F++ +I+L+L F++Y ++ IR +I ++PKGQ +A+ A+G+++ +T II Sbjct: 65 ITGDYIEISPFLSGVIALSLIFASYAAQTIRGAIKAVPKGQREAASALGISKSRTFVAII 124 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 +PQ I + L+++++ +LK T++ S I + ++ + AQ + T++ Y A VYL Sbjct: 125 IPQAIRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLSSAATHESFTWYATAAAVYL 184 Query: 201 ILTSFCYIIQIKIESSVTQHTYSVDK 226 ++T I +I++ + S + Sbjct: 185 VITLITQQIIKRIDAKYSAQEGSSNN 210 >gi|317486432|ref|ZP_07945259.1| binding-protein-dependent transport system inner membrane component [Bilophila wadsworthia 3_1_6] gi|316922342|gb|EFV43601.1| binding-protein-dependent transport system inner membrane component [Bilophila wadsworthia 3_1_6] Length = 312 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 72/131 (54%) Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 D VA +++L + AY++EI+R I +P GQW+AS A+G +R Q +R +I PQ + Sbjct: 179 LDRMVAAVLTLGVYEGAYVTEIVRGGIEGVPHGQWEASAALGFSRPQQLRLVIFPQAVRA 238 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCY 207 PL + I+ K +++AS I++P++ A +++ + ++ +YL+L C Sbjct: 239 ILPPLVGQVITTFKDSALASLISLPDLTFQALEVMAISRMTFEVWISAGAIYLLLGVLCA 298 Query: 208 IIQIKIESSVT 218 +E+ T Sbjct: 299 RYGRWLETRET 309 >gi|269964207|ref|ZP_06178498.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3] gi|269831056|gb|EEZ85224.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3] Length = 365 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 63/195 (32%), Positives = 105/195 (53%), Gaps = 8/195 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFV 76 + ++VTL IA + V+SL IG +A+ R SD II I Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVALALGR--RSDMPIIRSICTVYIEVWRGVPLITVLFM 212 Query: 77 IFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G D + +I + + +AY++E++R + +IPKGQ++A+ A+GLT Sbjct: 213 ASVMLPLFLAQGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLTYW 272 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + + IILPQ + + + + FI + K TS+ I + ++ Q +T + L Sbjct: 273 KKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPEWLGFAT 331 Query: 194 E-LAFVYLILTSFCY 207 E FV L+ FC+ Sbjct: 332 ESYVFVALVFWVFCF 346 >gi|170016504|ref|YP_001727423.1| ABC-type amino acid transport system, permease component [Leuconostoc citreum KM20] gi|169803361|gb|ACA81979.1| ABC-type amino acid transport system, permease component [Leuconostoc citreum KM20] Length = 213 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 107/196 (54%), Gaps = 3/196 (1%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ ++FP + TL + I+ V S+I+G A+++I + + + YV +FR Sbjct: 3 LLQNNFPTFM-QGFGYTLLSSLIALVGSMILGTAFAIMQIV-PKKWVRKVGNVYVQVFRN 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PLL+ F F + + F++ I+L L SA+I+E +R+ I+SI GQ + + A Sbjct: 61 IPLLIITFFFFLVVSKY-VKMSGFMSGTIALMLYTSAFIAETVRAGILSIDGGQMEGARA 119 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GL+ Q +++IILPQ + L ++FI+++K++S+ + + ++ I + T++ Sbjct: 120 NGLSFAQAMQYIILPQAFRVALPSLGNQFINLVKNSSILAFVGGLDLMYQGNMIAANTFE 179 Query: 188 PLIIYCELAFVYLILT 203 Y + +YLI+T Sbjct: 180 TFSTYIIVGILYLIIT 195 >gi|302541694|ref|ZP_07294036.1| glutamate permease [Streptomyces hygroscopicus ATCC 53653] gi|302459312|gb|EFL22405.1| glutamate permease [Streptomyces himastatinicus ATCC 53653] Length = 214 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 93/173 (53%), Gaps = 5/173 (2%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWI--FRGTPLLVQLFVIFYGLPHIGIVFDS 90 +++L +G +A R+ + SL W+ R TPL + F + GLP G++ Sbjct: 27 LLALALGVLMAAFRV---APVASLRAFGTAWVTVLRNTPLTLLFFAVMLGLPRFGLILPF 83 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 +++L SA+I E +RS I ++P GQ +A+ ++G+T +QT+ ++LPQ Sbjct: 84 TAFAVLALGCYTSAFICEAVRSGINTVPVGQGEAARSLGMTFEQTLGAVVLPQAFRAVIP 143 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 P+ S I++ K++++A + ++ E+ T + + Y + + +A YL++T Sbjct: 144 PVGSTLIALAKNSAIAGSFSVTELLGTYKPLNEMGYSIIWSFVWIAVGYLLVT 196 >gi|268590212|ref|ZP_06124433.1| arginine ABC transporter, permease protein ArtQ [Providencia rettgeri DSM 1131] gi|291314493|gb|EFE54946.1| arginine ABC transporter, permease protein ArtQ [Providencia rettgeri DSM 1131] Length = 246 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 115/242 (47%), Gaps = 34/242 (14%) Query: 17 LYAAIVVTLPIACISFVISLIIG-FFIAVIRIFFSDTIISLIMHFYVWIFRGTP-LLVQL 74 L +A +T+ +A + V+ LI+ F A + F I+ + +V + RG P LLV L Sbjct: 7 LTSAAGITVGLAVSALVLGLILAMLFTAWESVRFKP--IAFLGTCWVTLIRGLPELLVVL 64 Query: 75 FVIFYGLPHIGIVFDSF------------------------------VAIIISLTLNFSA 104 FV F L I + D F V +I+L L +++ Sbjct: 65 FVYFGTLQLINLFGDGFDINLGFWQTTIQIDPSIFFANSGEFDYTPFVCGVIALALLYAS 124 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 Y S+ +R ++ ++P GQW+A +A+GL ++ I+PQ + L ++++ +LK T+ Sbjct: 125 YASQTLRGALKAVPYGQWEAGFALGLNKRTIFFRFIMPQMWRHALPGLGNQWLVLLKDTA 184 Query: 165 VASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 + S I++ ++ + IV+ T++P Y + +YL +T +I +IE T+ Sbjct: 185 LVSLISVNDLMLQTKTIVNRTHEPFTWYAIVGLIYLAITLVSQVILKRIELRTTRFERGE 244 Query: 225 DK 226 K Sbjct: 245 SK 246 >gi|191639795|ref|YP_001988961.1| Glutamine-binding protein / Glutamine transport system permease protein [Lactobacillus casei BL23] gi|190714097|emb|CAQ68103.1| Glutamine-binding protein / Glutamine transport system permease protein [Lactobacillus casei BL23] Length = 488 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 98/181 (54%), Gaps = 2/181 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + T+ + ++ + ++G + ++ + + + +++IFRG PL+V Sbjct: 286 LMSGLEETMVLTVVAIFFATLVGILVGLLGVL-PNKFAQGVATTFIYIFRGLPLMVLALF 344 Query: 77 IFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+ G+P IG +F+A I++LTLN AY + ++ I ++ GQ +A+ ++GL + Sbjct: 345 IYNGVPSLIGSKVPAFIAGIVTLTLNEGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKA 404 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R +ILPQ I ++FI LK TS+ S I + E+ QT + I++ + I+ + Sbjct: 405 MRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGLLELTQTGKIIIARNMEGFKIWTMV 464 Query: 196 A 196 A Sbjct: 465 A 465 >gi|293608328|ref|ZP_06690631.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828901|gb|EFF87263.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325121938|gb|ADY81461.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Acinetobacter calcoaceticus PHEA-2] Length = 225 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 97/181 (53%), Gaps = 15/181 (8%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + TL + ++ + ++IG +A++R+ S+ I S FYV +FRG PL+ +F+ Sbjct: 15 LKEGFIFTLTVTVLAMMGGILIGTPLAMMRLS-SNAIASNFAKFYVDLFRGIPLIQVIFI 73 Query: 77 IFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 ++ LP + G +F S +++ + +A+ SEI+RS I SI KGQ A YA Sbjct: 74 FYFLLPKVFEFQSDTYWGPLFSS----VVTFAIFEAAFFSEIVRSGIQSISKGQVHAGYA 129 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G T Q++R+++LPQ L ++ I + + S+ I+ P+ A + + TY Sbjct: 130 LGFTYGQSMRYVVLPQAFRNMLPVLLTQTIILFQDISLVYVISAPDFLGRADTL-ANTYG 188 Query: 188 P 188 P Sbjct: 189 P 189 >gi|255280681|ref|ZP_05345236.1| amino acid ABC transporter, permease protein [Bryantella formatexigens DSM 14469] gi|255268618|gb|EET61823.1| amino acid ABC transporter, permease protein [Bryantella formatexigens DSM 14469] Length = 218 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 10/166 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + T I + + SL +G +A I + S ++ VWI RGTPL++QL + Sbjct: 9 LMSGLATTFQIFFFTLIFSLPLGLLLAFGTISKCRPL-SYLIQLIVWIIRGTPLMLQLII 67 Query: 77 IFYGLPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 IFYG P + G A +++ T+N++ Y S I R I +P GQ +A + Sbjct: 68 IFYG-PGLWFGHNIWSGGEAGRITATVVAFTINYACYFSVIFRGGIEGVPAGQREAGQVL 126 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 G+T+ Q + L Q I P+S+E I+++K TS+A I E+ Sbjct: 127 GMTKSQIFFKVTLLQMIKRIVPPMSNEIITLVKDTSLARIIAAQEL 172 >gi|226942879|ref|YP_002797952.1| Amino acid ABC transporter permease [Azotobacter vinelandii DJ] gi|226717806|gb|ACO76977.1| Amino acid ABC transporter, permease protein [Azotobacter vinelandii DJ] Length = 247 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 59/181 (32%), Positives = 102/181 (56%), Gaps = 15/181 (8%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A TL +A + ++I+L++G + V+R + +S I YV +FR PLLVQLF+ + Sbjct: 27 AGFGWTLAVALVGWIIALLLGSLLGVLRTL-PNRWLSGIASAYVELFRNVPLLVQLFLWY 85 Query: 79 YGLPHI-------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 + +P + +++++++ L L +A + E +R+ I ++P+GQ A+ Sbjct: 86 FLVPDLLPTPLELWFKQDLSPATSAYLSVVVCLGLFTAARVCEQVRTGIQALPRGQTAAA 145 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQRIVST 184 A+GL Q R ++LPQ PL+SEF++I+K++SVAS I + E+ QT Q T Sbjct: 146 QALGLRSGQIYRQVLLPQAFRIIIPPLTSEFLNIIKNSSVASLIGLMELLAQTRQTAEFT 205 Query: 185 T 185 T Sbjct: 206 T 206 >gi|26987806|ref|NP_743231.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida KT2440] gi|24982503|gb|AAN66695.1|AE016297_9 amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] gi|313497436|gb|ADR58802.1| Polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida BIRD-1] Length = 248 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 52/158 (32%), Positives = 91/158 (57%), Gaps = 15/158 (9%) Query: 36 LIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI---GI------ 86 L++G + V+R + ++S I YV +FR PLLVQLF+ ++ +P + G+ Sbjct: 44 LLLGSLLGVMRTV-PNRLVSGIATAYVELFRNVPLLVQLFIWYFLVPDLLPEGLQEWFKQ 102 Query: 87 ----VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + ++++I L L +A + E +R+ I ++PKGQ A+ A+G + Q +++LP Sbjct: 103 DLNPTTSALISVVICLGLFTAARVCEQVRTGIQALPKGQEAAARAMGFSLPQIYNNVLLP 162 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 Q PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 163 QAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|121608199|ref|YP_996006.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121552839|gb|ABM56988.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 251 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 96/182 (52%), Gaps = 3/182 (1%) Query: 39 GFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS---FVAII 95 G I +R +I + + +V +FR PLLVQ+F+ ++ LP + V F ++ Sbjct: 56 GSVIGTLRTLQDRPMIVRLGNAWVELFRNIPLLVQIFLWYHVLPSMFPVLKGAPGFALVV 115 Query: 96 ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSE 155 ++L SA I+E +R+ I ++P GQ A A+G T QT R+++LP PL+SE Sbjct: 116 LALGFFTSARIAEQVRAGIQTLPSGQRYAGLAMGFTTLQTYRYVLLPMAFRIIIPPLTSE 175 Query: 156 FISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 ++I K++SVA +++ E+ A + T + + +Y + +Y+I I + IE Sbjct: 176 MMNIFKNSSVAFAVSVAELTMFAMQAQEETARGIEVYLAVTALYIISALIINRIMVFIEK 235 Query: 216 SV 217 V Sbjct: 236 RV 237 >gi|183602354|ref|ZP_02963720.1| permease protein of ABC transporter system [Bifidobacterium animalis subsp. lactis HN019] gi|219683331|ref|YP_002469714.1| permease protein of ABC transporter system [Bifidobacterium animalis subsp. lactis AD011] gi|241191292|ref|YP_002968686.1| ABC transporter permease [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196698|ref|YP_002970253.1| ABC transporter permease [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218273|gb|EDT88918.1| permease protein of ABC transporter system [Bifidobacterium animalis subsp. lactis HN019] gi|219620981|gb|ACL29138.1| permease protein of ABC transporter system [Bifidobacterium animalis subsp. lactis AD011] gi|240249684|gb|ACS46624.1| permease protein of ABC transporter system [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251252|gb|ACS48191.1| permease protein of ABC transporter system [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295794285|gb|ADG33820.1| permease protein of ABC transporter system [Bifidobacterium animalis subsp. lactis V9] Length = 218 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 76/127 (59%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y+ + R TPLLVQL+ +++GLP +G V+ + + I+ L +Y++E +R+ + S+P+ Sbjct: 57 YIEVSRNTPLLVQLYFLYFGLPKMGFVWSAELCAIVGLGFLGGSYMAESMRAGLQSVPQI 116 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q + +Y +G QT+ +I+PQ ++ S + + I ++K +SV S I + ++ A+ Sbjct: 117 QRENAYMLGFNTWQTLTRVIVPQAVSISTPGIVANVIFLIKESSVVSAIALADVMYMAKD 176 Query: 181 IVSTTYQ 187 ++ Y Sbjct: 177 LMGMYYN 183 >gi|330874239|gb|EGH08388.1| amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330968063|gb|EGH68323.1| amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 231 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 15/172 (8%) Query: 61 YVWIFRGTPLLVQLFVIFYG-------------LPHIGIVFDSFVAIIISLTLNFSAYIS 107 Y + RG P L+ + +I++G +P++ +F A +I+L L F AY + Sbjct: 55 YSTLVRGIPELLWVLLIYFGTVNGMRALGELLGIPNL--ALSAFAAGVIALGLCFGAYAT 112 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E+ R +I++IPKG +A A+G++R + + ++LPQ + L + F+ ++K T++ S Sbjct: 113 EVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNLFMILMKDTALVS 172 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 I + EI + AQ V T + Y A +YL LT I +E + Sbjct: 173 VIGLEEIMRHAQIAVGFTKEAFTFYMVAAIMYLGLTVLAMIGMYFLEKRAGR 224 >gi|291296961|ref|YP_003508359.1| polar amino acid ABC transporter inner membrane subunit [Meiothermus ruber DSM 1279] gi|290471920|gb|ADD29339.1| polar amino acid ABC transporter, inner membrane subunit [Meiothermus ruber DSM 1279] Length = 367 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 100/187 (53%), Gaps = 7/187 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFYVWI 64 LI +SF L+ A V + I + V SLI G +A+ ++ I I FY Sbjct: 145 ELIRNSF-GLILQAFWVNVVIFLFAGVFSLIWGLVVAIAKLLPGKPAQPIRFIATFYTDA 203 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAI----IISLTLNFSAYISEIIRSSIISIPKG 120 F P ++ +++I +GLP GI F + + +++LTL + AY++E+ R+ + SI Sbjct: 204 FLSLPSIIVIYLIGFGLPLTGIGFFRNLPLEALAVLALTLTYGAYMAEVYRAGLESIHPS 263 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 QW A+ ++GL+ QT+R +++PQ + PL + FI + K T++ + + + + F A+ Sbjct: 264 QWAAARSLGLSYGQTLRFVVVPQAVRRIIPPLLNNFIGMQKDTALVNVVGVIDAFNQARI 323 Query: 181 IVSTTYQ 187 I S + Sbjct: 324 IASNDFN 330 >gi|183597013|ref|ZP_02958506.1| hypothetical protein PROSTU_00245 [Providencia stuartii ATCC 25827] gi|188023669|gb|EDU61709.1| hypothetical protein PROSTU_00245 [Providencia stuartii ATCC 25827] Length = 250 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 56/225 (24%), Positives = 117/225 (52%), Gaps = 11/225 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFF----IAVIRIFFSDTIISLI 57 + W L+ +FP +TL I+ ++ +S++ G +A++R F+ + + + + Sbjct: 7 EQNWQYLLFGAFPDGPIEGAALTLIISLVAGAMSIVFGTLGGVALAMLRGFWMN-LFAAV 65 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + F FR P+++ +F ++ LP + G ++I +L L SAY++ +++ I++ Sbjct: 66 LGF----FRAIPVIMLIFWTYFFLPVVLGTEIPGIASVICALALITSAYLAHAVKAGILA 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-F 175 I KGQW A ++G +R Q + I+LPQ + +++++++K TS+A + + E+ F Sbjct: 122 IGKGQWQAGLSLGFSRWQVLWQIVLPQALRMMVPSFINQWVALIKDTSLAYIVGVAELSF 181 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Q PL I+ +AF+Y ++ I+ I ++ H Sbjct: 182 LATQVNNREMVYPLEIFLFVAFIYFVICLTLEIVANLIAKRLSHH 226 >gi|310814769|ref|YP_003962733.1| polar amino acid ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] gi|308753504|gb|ADO41433.1| polar amino acid ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] Length = 264 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 89/163 (54%), Gaps = 18/163 (11%) Query: 59 HFYVWIFRGTPLLVQL-FVIFYGLPHIGIVFDSFVA-----------------IIISLTL 100 YV + RG P++V L +V F G+P + +++ II+L L Sbjct: 82 RLYVEVMRGVPIMVLLLYVAFVGVPGMVALWNGLTGWTGIEPLRTRDVPLLWRAIIALLL 141 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 ++++++E+ R+ I+S+ GQ +A+ A+GL R RHI+ PQ + PL ++F++++ Sbjct: 142 AYASFLAEVFRAGILSVEVGQIEAAKALGLGRWHIFRHIVWPQAMRNVLPPLGNDFVAMV 201 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 K +S+ S + + +I Q A+ ++ ++ Y +A +YL +T Sbjct: 202 KDSSLVSVLGVTDITQLAKLTSASNFRYFETYNVVALIYLTVT 244 >gi|327383907|gb|AEA55383.1| hypothetical protein LC2W_3058 [Lactobacillus casei LC2W] gi|327387088|gb|AEA58562.1| hypothetical protein LCBD_3073 [Lactobacillus casei BD-II] Length = 487 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 98/181 (54%), Gaps = 2/181 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + T+ + ++ + ++G + ++ + + + +++IFRG PL+V Sbjct: 285 LMSGLEETMVLTVVAIFFATLVGILVGLLGVL-PNKFAQGVATTFIYIFRGLPLMVLALF 343 Query: 77 IFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+ G+P IG +F+A I++LTLN AY + ++ I ++ GQ +A+ ++GL + Sbjct: 344 IYNGVPSLIGSKVPAFIAGIVTLTLNEGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKA 403 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R +ILPQ I ++FI LK TS+ S I + E+ QT + I++ + I+ + Sbjct: 404 MRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGLLELTQTGKIIIARNMEGFKIWTMV 463 Query: 196 A 196 A Sbjct: 464 A 464 >gi|229551205|ref|ZP_04439930.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|229315497|gb|EEN81470.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] Length = 488 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 105/197 (53%), Gaps = 11/197 (5%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 +K W L+ L +V+T+ + ++ ++IGF + VI + + I Sbjct: 279 LKANWSTLM-----DGLRETMVLTIVAIFFATLVGILIGF-LGVI----PNKLCQGIATT 328 Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +++IFRG PL+V I+ G+P IG +F+A I++LTLN AY + ++ I ++ Sbjct: 329 FIYIFRGLPLMVLALFIYTGVPSLIGSKVPAFIAGIVTLTLNEGAYTAAFVKGGIQAVDP 388 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ ++GL + +R +ILPQ I ++FI LK TS+ S I + E+ QT + Sbjct: 389 GQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGLLELTQTGK 448 Query: 180 RIVSTTYQPLIIYCELA 196 I++ + I+ +A Sbjct: 449 IIIARNMEGFKIWTMVA 465 >gi|227820382|ref|YP_002824353.1| amino acid ABC transporter permease [Sinorhizobium fredii NGR234] gi|227339381|gb|ACP23600.1| probable amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 223 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 109/204 (53%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M Y++ F +++ +PQ+ I +T+ + + V + +G A +R + ++ Sbjct: 1 MNYQFEFGWLVEYYPQIA-KGIAITIQLIAVGAVAGISLGIVCAWVRAL-GPAWLKPVVA 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TP L+QLF IF+GLP +G+ A I++ +N AY EIIR+ I + PK Sbjct: 59 AYVELIRNTPFLIQLFFIFFGLPSLGLKLSELQAANIAMVVNLGAYSCEIIRAGIQATPK 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A ++ +T +T RH++L ++ LSS+ + ++ ++V S I ++ A Sbjct: 119 GQFEAGSSLAMTPFETFRHVVLIPSLERIWPALSSQVVIVMLGSAVVSQIAAEDLTFAAN 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I S T++ Y VYL+L Sbjct: 179 FIQSRTFRAFEAYMVSTAVYLLLA 202 >gi|210135328|ref|YP_002301767.1| glutamine ABC transporter permease protein [Helicobacter pylori P12] gi|210133296|gb|ACJ08287.1| glutamine ABC transporter permease protein [Helicobacter pylori P12] Length = 217 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 5/201 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + + S P + + +TL I+ ++SL++GF A+I ++F IS I++ Sbjct: 1 MALDW-DFMFHSIPAF-FKGLELTLYISFFGILLSLLVGFLCAII-LYFKTRFISPIVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QKESALSLGFSPLKMTYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQPLIIYCELAFVYLI 201 + Y+ L+ YLI Sbjct: 176 FIGIYYKTTESLLMLSLTYLI 196 >gi|311106716|ref|YP_003979569.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 10 [Achromobacter xylosoxidans A8] gi|310761405|gb|ADP16854.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 10 [Achromobacter xylosoxidans A8] Length = 229 Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 86/140 (61%), Gaps = 2/140 (1%) Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RG PLL+ +F ++ +P + G V F +I +L + SAY+SE+IRS I ++P+GQ Sbjct: 67 VVRGMPLLMLIFWAYFVVPKLTGQVISGFWTLIFALVVYESAYLSEVIRSGIEAVPRGQI 126 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +AS ++G+ T+R ++LPQ + ++S+F+S +K TS+ I++ E+ A ++ Sbjct: 127 EASRSLGVGYWTTMRRVVLPQALFNVLPSMTSQFVSTIKETSLGYVISVNELTFAANQVN 186 Query: 183 STTY-QPLIIYCELAFVYLI 201 + +PL ++ LA +Y + Sbjct: 187 NLVLTKPLQVFGILAIIYFL 206 >gi|299770478|ref|YP_003732504.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter sp. DR1] gi|298700566|gb|ADI91131.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter sp. DR1] Length = 225 Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 98/181 (54%), Gaps = 15/181 (8%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + TL + ++ + ++IG +A++R+ ++ I S FYV +FRG PL+ +F+ Sbjct: 15 LKEGFIFTLTVTVLAMMGGILIGTPLAMMRLS-NNAIASNFAKFYVDLFRGIPLIQVIFI 73 Query: 77 IFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 ++ LP I G +F S +++ + +A+ SEI+RS I SI +GQ +A YA Sbjct: 74 FYFLLPKIFEFQSDTYWGPLFSS----VVTFAIFEAAFFSEIVRSGIQSISRGQVNAGYA 129 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G T Q++R+++LPQ L ++ I + + S+ I+ P+ A + + TY Sbjct: 130 LGFTYGQSMRYVVLPQAFRNMLPVLLTQTIILFQDISLVYVISAPDFLGRADTL-ANTYG 188 Query: 188 P 188 P Sbjct: 189 P 189 >gi|289676778|ref|ZP_06497668.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae FF5] Length = 206 Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 96/182 (52%), Gaps = 13/182 (7%) Query: 35 SLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL---------P 82 S++IGF +++ I + + FY ++FRGTPL +QL + + G+ P Sbjct: 3 SIVIGFCVSIPLSIARVSGKRWVRWPVQFYTYLFRGTPLYIQLLICYTGIYSLAAVREQP 62 Query: 83 HIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + F D+ I++ TLN AY +EI +I S+ G+ +A+ A GLT + ++I+ Sbjct: 63 MLDAFFRDAMNCTILAFTLNTCAYTTEIFAGAIRSMAHGEVEAAKAYGLTGWKLYAYVIM 122 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 P + S S+E I +L ST+VA T T+P+I + A+ S T+ + A +YL Sbjct: 123 PSVLRRSLPYYSNEVILMLHSTTVAFTATVPDILKVARDANSATFMTFQSFGIAAVMYLT 182 Query: 202 LT 203 +T Sbjct: 183 VT 184 >gi|317049448|ref|YP_004117096.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316951065|gb|ADU70540.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 236 Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 21/204 (10%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGF---FIAVIRIFFSDTIISLI 57 + + W L+ ++ Q L ++ TL +A +S +++IG F R+ + D I L Sbjct: 4 LDFSW--LLDPTYQQWLLQGVLQTLELAALSSAFAIVIGLLGAFCLTFRLAWLDASIEL- 60 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD------------SFVAIIISLTLNFSAY 105 +V +FR TP L+Q+ ++ L IG + +F++ +SL+L A Sbjct: 61 ---FVELFRNTPPLLQMLFFYFTLTQIGFTREDPVTGLQVPLISAFMSATVSLSLFGGAL 117 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 E RS ++PK +A+ ++G TR RH+ +P PL++ ++ K+TS Sbjct: 118 CIEAFRSGFDAVPKATLEAARSLGYTRWGLFRHVQVPIAARICLPPLTNVLTNLFKTTSQ 177 Query: 166 ASTITIPEIFQTAQRIVSTTYQPL 189 AS IT+PE+ A +I + T++ L Sbjct: 178 ASVITVPELMYAAGQIYNDTFRTL 201 >gi|118473089|ref|YP_889613.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD [Mycobacterium smegmatis str. MC2 155] gi|118174376|gb|ABK75272.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Mycobacterium smegmatis str. MC2 155] Length = 222 Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 93/177 (52%), Gaps = 1/177 (0%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 + P L+ A TL I S ++++++G + + R IS + V R TP+ Sbjct: 15 EVLPGLVAAFFKFTLGITAASSLVAIVLGLVLVLGR-RSGARWISWPSYAVVEFIRSTPI 73 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 +QLF +++GLP +GI + V I L ++++ Y+SE+ R+ I +IP+GQW+A A+ L Sbjct: 74 PIQLFFVYFGLPVVGIRPSALVTGIAVLGVHYACYMSEVYRAGIDAIPQGQWEACTALSL 133 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 + +T R ++LPQ + ++ I++ K T I + E+ A + Y+ Sbjct: 134 SPYRTWRAVVLPQVVRRILPSTGNQVIALFKETPFLIVIGVLEMVTVANQFGGQNYR 190 >gi|94309636|ref|YP_582846.1| amino acid ABC transporter permease [Cupriavidus metallidurans CH34] gi|93353488|gb|ABF07577.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 231 Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 107/189 (56%), Gaps = 10/189 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ + + L + V++L ++ I+F ISL + IA++R+ + L YV R Sbjct: 9 LLSGQYHEWLVSGFVMSLKLSVIAFAISLPLAIVIALLRLAPLAPLRGL-GQAYVEAIRN 67 Query: 68 TPLLVQLFVIFYGLPHI------GIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIP 118 PLL + ++G P + +++ V+ +I+L L +AY++E IRS I SIP Sbjct: 68 VPLLAHMLFWYFGAPQLLPFAIKSWLYEHNYEAVSALIALVLYTTAYMAEDIRSGIRSIP 127 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 K Q +AS A+G + ++R ++LPQ++ + PL ++ +++ K++S+A I + E+ A Sbjct: 128 KEQLEASRALGFSFLASMRLVVLPQSLRITVPPLVNQILNLWKNSSIAMVIGVAELMYQA 187 Query: 179 QRIVSTTYQ 187 Q++ S T++ Sbjct: 188 QQVESATFR 196 >gi|312959432|ref|ZP_07773949.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311286149|gb|EFQ64713.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 236 Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 95/182 (52%), Gaps = 13/182 (7%) Query: 35 SLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF--- 88 +L+IGF +++ I ++ + FY ++FRGTPL +QL + + G+ I V Sbjct: 33 ALVIGFVVSIPLSIARVSRKRLVRWPVQFYTYLFRGTPLYIQLLICYTGIYSIAAVRAQP 92 Query: 89 -------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 D+ I++ LN AY +EI +I S+ G+ +A+ A GL+ + ++I+ Sbjct: 93 VLDAFFRDAMNCTILAFALNTCAYTTEIFAGAIRSMAHGEVEAAKAYGLSGWKLYAYVIM 152 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 P + S S+E I +L ST+VA T TIP+I + A+ S T+ + A +YL Sbjct: 153 PSALRRSLPYYSNEVILMLHSTTVAFTATIPDILKVARDANSATFMTFQSFGIAALIYLA 212 Query: 202 LT 203 +T Sbjct: 213 VT 214 >gi|241765004|ref|ZP_04763000.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] gi|241365401|gb|EER60194.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] Length = 252 Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 49/163 (30%), Positives = 91/163 (55%), Gaps = 3/163 (1%) Query: 42 IAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS---FVAIIISL 98 I +R ++ + + +V +FR PLLVQ+F+ ++ +P + + FV ++++L Sbjct: 59 IGTLRTLEGRPMVVRLCNAWVELFRNIPLLVQIFLWYHVVPTLFPALQAVPGFVLVVLAL 118 Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158 SA I+E +RS I ++P+GQ A A+G T QT RH++LP PL+SE ++ Sbjct: 119 GFFTSARIAEQVRSGIQALPRGQRYAGLAMGFTTFQTYRHVLLPMAFRIIIPPLTSETMN 178 Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 I K++SVA +++ E+ A + T + + +Y + Y++ Sbjct: 179 IFKNSSVAFAVSVAELTMFAMQAQEETSRGVEVYLAVTACYVV 221 >gi|167034985|ref|YP_001670216.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166861473|gb|ABY99880.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 229 Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 104/204 (50%), Gaps = 18/204 (8%) Query: 18 YAAIVV-----TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 Y A+++ TL +A S +++++G +R+ ++ + Y + RG P LV Sbjct: 5 YGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLS-PVRWLAWLGDLYSTVIRGIPDLV 63 Query: 73 QLFVIFYG--------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + +IFYG P +G I + +A I +L F AY+SE R + + IPKG Sbjct: 64 LILLIFYGGQDIINRVAPLLGYEDYIDLNPLIAGIGTLGFIFGAYLSETFRGAFLGIPKG 123 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A G++ +Q I +PQ I + ++ ++ + K+T++ S + + ++ A++ Sbjct: 124 QAEAGVAYGMSNRQVFFRIQVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQ 183 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 T +P + +A +YL+LTS Sbjct: 184 AADATREPFTFFLAVAALYLVLTS 207 >gi|282852733|ref|ZP_06262075.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] gi|282556475|gb|EFB62095.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] Length = 158 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 78/131 (59%), Gaps = 9/131 (6%) Query: 78 FYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 FYGLP +GIVF + A +++ +N++AY +EI R + ++P GQ++A+ +GL+R QTI Sbjct: 16 FYGLPTVGIVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPVGQFEAAQVLGLSRWQTIN 75 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ----RIVSTTYQPLIIYC 193 I+ PQ + + +E I+++K +S+ I + ++ + R VS PL++ Sbjct: 76 RIVRPQVVKIVFPSIGNELINLVKDSSLVYVIGLGDLLRAGNVATARDVSLV--PLVL-- 131 Query: 194 ELAFVYLILTS 204 + VYL +T+ Sbjct: 132 -VGCVYLAMTA 141 >gi|259651117|dbj|BAI43279.1| amino acid ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 487 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 97/181 (53%), Gaps = 2/181 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + T+ + ++ + ++G I + + + + I +++IFRG PL+V Sbjct: 285 LMGGLRETMVLTIVAIFFATLVGILIGFLGVI-PNKLCQGIATTFIYIFRGLPLMVLALF 343 Query: 77 IFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+ G+P IG +F+A I++LTLN AY + ++ I ++ GQ +A+ ++GL + Sbjct: 344 IYTGVPSLIGSKVPAFIAGIVTLTLNEGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKA 403 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R +ILPQ I ++FI LK TS+ S I + E+ QT + I++ + I+ + Sbjct: 404 MRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGLLELTQTGKIIIARNMEGFKIWTMV 463 Query: 196 A 196 A Sbjct: 464 A 464 >gi|116686948|ref|YP_840195.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|116652663|gb|ABK13302.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia cenocepacia HI2424] Length = 221 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 45/138 (32%), Positives = 82/138 (59%), Gaps = 6/138 (4%) Query: 86 IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTI 145 ++ D+F I++L++N SAY++ I+R +I +P G+ +A +A G+TR Q +R I+ P+ Sbjct: 62 LLRDAFWYAIVALSVNESAYVATILRGAIAGVPAGEIEAGHAYGMTRTQVLRRIVGPRAW 121 Query: 146 TTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPLIIYCELAFVYLIL 202 + L+ E I +LKST +AST+T+ ++ TA + T Y+PL A VY++L Sbjct: 122 RLALPALTGEAILLLKSTVLASTVTVFDVMGTANTLRFETLRVYEPL---AGAAIVYVVL 178 Query: 203 TSFCYIIQIKIESSVTQH 220 + I ++E + ++ Sbjct: 179 VALLTIPAARLEQRINRY 196 >gi|28872470|ref|NP_795089.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28855725|gb|AAO58784.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 231 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 15/172 (8%) Query: 61 YVWIFRGTPLLVQLFVIFYG-------------LPHIGIVFDSFVAIIISLTLNFSAYIS 107 Y + RG P L+ + +I++G +P++ +F A +I+L L F AY + Sbjct: 55 YSTLVRGIPELLWVLLIYFGTVNGMRALGELLGIPNL--ALSAFAAGVIALGLCFGAYAT 112 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E+ R +I++IPKG +A A+G++R + + ++LPQ + L + F+ ++K T++ S Sbjct: 113 EVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNLFMILMKDTALVS 172 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 I + EI + AQ V T + Y A +YL LT I +E + Sbjct: 173 VIGLEEIMRHAQIAVGFTKEAFTFYMVAAIMYLGLTVLAMIGMYFLEKHAGR 224 >gi|89056451|ref|YP_511902.1| amino acid ABC transporter permease [Jannaschia sp. CCS1] gi|88866000|gb|ABD56877.1| amino acid ABC transporter membrane protein 1, PAAT family [Jannaschia sp. CCS1] Length = 251 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 73/116 (62%) Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 FD + A +++L + S ISEI R+ I ++ GQW+A+ +IG+++ QT R+IILPQ++ Sbjct: 119 FDRYWASVLTLAVFHSVLISEIFRAGINAVATGQWEAAKSIGMSQGQTYRYIILPQSVRF 178 Query: 148 SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 P+ E + ++KS+++ S I + E+ + I+S T+ I+ +A VY+ +T Sbjct: 179 MLPPMFGEVVHLIKSSAIVSVIAVAELTTIGRNIISDTFLSFEIWFTVALVYMAIT 234 >gi|49474412|ref|YP_032454.1| amino acid permease [Bartonella quintana str. Toulouse] gi|49239916|emb|CAF26314.1| Amino acid permease [Bartonella quintana str. Toulouse] Length = 250 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 53/153 (34%), Positives = 91/153 (59%), Gaps = 7/153 (4%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMH----FYVWIFRGTPLLVQLFVIFYGLPHIGI 86 S ++++ G I +R + +II ++ +V I R PLLVQ+F+ ++ +P + Sbjct: 47 SLILAVFFGIIIGTMRTLPNTSIIRCLLRAIGGIWVEIMRNIPLLVQVFLWYFVVPKVYP 106 Query: 87 VFDSFVAII-ISLTLNF--SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + +F I+ ++ L F SA I+E +RS I +IP GQ A+ A+G T QT R+IILP+ Sbjct: 107 LAMNFSPILLVTCALGFFTSARIAEQVRSGIEAIPSGQRYAAMAMGFTTYQTYRYIILPR 166 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + PL+SE + I+K++S+A ++I E+ Q Sbjct: 167 ALRMIMPPLTSEAMGIVKNSSIAFAVSIYELMQ 199 >gi|317180900|dbj|BAJ58686.1| glutamine ABC transporter, permease protein [Helicobacter pylori F32] Length = 217 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 100/187 (53%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + + S P L + +TL I+ ++SL++GF A+I ++F IS I++ Sbjct: 1 MALDW-DFMFHSIPMFL-KGLELTLYISFFGILLSLLVGFLCAII-LYFKTRYISPIVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEISRNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QKESALSLGFGPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQ 187 + Y+ Sbjct: 176 FIGIYYK 182 >gi|213971202|ref|ZP_03399320.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301382331|ref|ZP_07230749.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302132165|ref|ZP_07258155.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924071|gb|EEB57648.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|331017119|gb|EGH97175.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 231 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 88/170 (51%), Gaps = 11/170 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIG-------IVFDSFVAIIISLTLNFSAYISEI 109 Y + RG P L+ + +I++G + +G + +F A +I+L L F AY +E+ Sbjct: 55 YSTLVRGIPELLWVLLIYFGTVNGMRALGEWLGIPNLALSAFAAGVIALGLCFGAYATEV 114 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +I++IPKG +A A+G++R + + ++LPQ + L + F+ ++K T++ S I Sbjct: 115 FRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNLFMILMKDTALVSVI 174 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + EI + AQ V T + Y A +YL LT I +E + Sbjct: 175 GLEEIMRHAQIAVGFTKEAFTFYMVAAIMYLGLTVLAMIGMYFLEKHAGR 224 >gi|16519952|ref|NP_444072.1| probable amino-acid ABC transporter permease y4tF [Sinorhizobium fredii NGR234] gi|2501399|sp|P55660|Y4TF_RHISN RecName: Full=Probable amino-acid ABC transporter permease protein y4tF gi|2182636|gb|AAB91859.1| probable amino-acid ABC transporter permease y4tF [Sinorhizobium fredii NGR234] Length = 238 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 93/169 (55%), Gaps = 14/169 (8%) Query: 61 YVWIFRGTPLLVQLFVIFYGLP------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 Y+ IFRGT LLVQLF +F+ LP I + VA +++L+LN AY +EI+R +I Sbjct: 68 YIEIFRGTSLLVQLFWLFFALPIAGDMMGIDLRLSPVVAGVLALSLNLGAYGAEIVRGAI 127 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++ Q++A+ A+ + Q + + LPQ I S+ I+ LK TS+ S IT+ ++ Sbjct: 128 QAVSPSQYEAATALNFSSSQALWRVALPQAIPEMMPSFSNLAIAALKDTSLVSLITLHDL 187 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVY----LILTSFCYIIQIKIESSVTQ 219 A+++ + +Y + +Y L+L+ F + IESSVT+ Sbjct: 188 TFAAEQLRNFYQDSTTVYTMVLLMYFGIALVLSFFMRL----IESSVTR 232 >gi|170289919|ref|YP_001736735.1| polar amino acid ABC transporter, inner membrane subunit [Candidatus Korarchaeum cryptofilum OPF8] gi|170173999|gb|ACB07052.1| polar amino acid ABC transporter, inner membrane subunit [Candidatus Korarchaeum cryptofilum OPF8] Length = 215 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 96/181 (53%), Gaps = 7/181 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-P 82 TL + + + +G IA+++ + + + YVW RGTPL+V L ++++G+ P Sbjct: 18 TLSLVALGLSLGFSLGLPIAIMKFYGAR------LDAYVWFMRGTPLIVLLSLLYWGVFP 71 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 +G+ F +I+L L SAY S+I S++ S+ Q A+ +IG+ +Q + +++LP Sbjct: 72 ALGVKIGPFETSVIALGLRSSAYQSQIFLSALNSVDSDQIIAARSIGMRERQVVAYVLLP 131 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + S S+E+ +LK +S+ + + EI A+ I T L+ Y ++ L Sbjct: 132 QALRISLPSWSNEYAIMLKDSSICFALGVMEILTRARYISVATGSALLPYLLAGILFFSL 191 Query: 203 T 203 T Sbjct: 192 T 192 >gi|120612398|ref|YP_972076.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax citrulli AAC00-1] gi|120590862|gb|ABM34302.1| amino acid ABC transporter membrane protein 1, PAAT family [Acidovorax citrulli AAC00-1] Length = 220 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 96/169 (56%), Gaps = 2/169 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 E L+ D P A+++T + +SFV +++G +A++R+F + ++ YV Sbjct: 3 EVARLLADHGPAF-GQALLLTWKLTALSFVPGVLLGMAVAMLRLFPLPPL-RWVLTLYVE 60 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FR P + L I + LP + V D +++++L L SA+ ++ +RS I +IP GQ + Sbjct: 61 TFRNIPSVALLIFIVFALPDLEFVIDYEPSVVLTLVLVCSAFTADYVRSGINTIPGGQIE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 A+ ++G+ + I ++LPQ + + P++S I+++ STS+AS + P Sbjct: 121 AALSLGMRPARIIWSVVLPQALRSVVQPMTSLLIALMLSTSLASQVPFP 169 >gi|91778560|ref|YP_553768.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91691220|gb|ABE34418.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia xenovorans LB400] Length = 247 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 61/235 (25%), Positives = 120/235 (51%), Gaps = 16/235 (6%) Query: 4 EWFN----LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 EW L++ +FP +T+ ++ +S ++S +G + + + L++ Sbjct: 5 EWLPTLRYLLLGAFPNGPLGGAALTVVLSVVSALLSAAVGL-AGGVALSLTRGGARLLLI 63 Query: 60 FYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 V FR P+L+ +F F+ +P H+ + A++ +L+L AY+S + + I+S Sbjct: 64 GIVAFFRAIPVLMLIFWTFFLMPILLHVDV--PGLAAVVCALSLIGGAYLSHAVHAGIVS 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + GQ A+ ++GLTR Q +R+++LPQ + ++++S++K TS+A + +PE Sbjct: 122 VGAGQQQAALSLGLTRWQALRYVVLPQAVRIMMPSFVNQWVSLVKDTSLAYIVGVPEFTF 181 Query: 177 TAQRIVSTTY-QPLIIYCELAFVYLILTS----FCYIIQIKIESSVTQHTYSVDK 226 A ++ S P I+ + VYL+L S F Y + ++ S+ + T DK Sbjct: 182 LANQVNSRLMIYPAQIFVFVGIVYLLLCSALQWFAYRVLLRAPSTRAK-TPRDDK 235 >gi|319761802|ref|YP_004125739.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC] gi|330826338|ref|YP_004389641.1| polar amino acid ABC transporter inner membrane subunit [Alicycliphilus denitrificans K601] gi|317116363|gb|ADU98851.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans BC] gi|329311710|gb|AEB86125.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans K601] Length = 229 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 47/197 (23%), Positives = 102/197 (51%), Gaps = 13/197 (6%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 ++T+ ++ S ++ ++G A ++ ++ L Y + RG P L+ + ++FYG Sbjct: 13 LLTVGVSLASLAVATLLGLAGAAAKLSGRRPLVWLA-QLYTTVVRGIPELLMMLLVFYGG 71 Query: 82 P------------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 G+ D FVA ++++ + AY++E R +I++IP+GQ +A++A G Sbjct: 72 AIGLNSLAELWGNQEGVDLDPFVAGVLTIGFIYGAYMTETFRGAILAIPRGQMEAAWAFG 131 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 + R +T I LPQ + + ++ ++ ++K+T++ S I + ++ A++ + +P Sbjct: 132 MGRLRTFVRITLPQMVRYALPSFTNNWLVLIKATALVSLIGLHDMTYLAKQSSAAAREPF 191 Query: 190 IIYCELAFVYLILTSFC 206 + A +YL TS Sbjct: 192 AFFLFTAAIYLAYTSLS 208 >gi|241764990|ref|ZP_04762987.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] gi|241365424|gb|EER60211.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] Length = 220 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 93/159 (58%), Gaps = 1/159 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+++T + +SFV ++G +AV+R+F + ++ YV IFR P + L I + Sbjct: 18 ALLLTWKLTVMSFVPGFLLGMVVAVLRLFPLPPL-RFVLTVYVEIFRNIPSVALLIFIVF 76 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 LP + ++ D ++I++LTL SA+ ++ +RS I +I Q +A+ ++G+ I + Sbjct: 77 ALPDLNVLIDYEPSVILTLTLVCSAFTADYLRSGINTIGGSQIEAALSLGMRPMHIISAV 136 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +LPQ + + P++S I+++ STS+AS + +P TA Sbjct: 137 VLPQALRSVVQPMTSLLIALMLSTSLASQVPVPGRELTA 175 >gi|254247529|ref|ZP_04940850.1| Amino acid ABC transporter [Burkholderia cenocepacia PC184] gi|124872305|gb|EAY64021.1| Amino acid ABC transporter [Burkholderia cenocepacia PC184] Length = 237 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 102/195 (52%), Gaps = 13/195 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL + +S + + +AV R+ +S + Y ++FRGTPL VQL + + Sbjct: 22 GVAITLWLLVVSIGLGFCLSVPLAVARVS-KKKWLSGAVWLYTYVFRGTPLYVQLLLCYT 80 Query: 80 GL---------PHIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 GL P + F D +++ TLN AY +EI +I + G+ +A+ A G Sbjct: 81 GLYSLQAVRGTPMLDAFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYG 140 Query: 130 LTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 ++ R +ILP + A+PL S+E I +L +T+VA T T+P+I + A+ + S TY Sbjct: 141 MSPFTMYRRVILPSALR-RALPLYSNEVIVMLHATTVAFTATVPDILKIARDVNSATYMS 199 Query: 189 LIIYCELAFVYLILT 203 + A +YL+++ Sbjct: 200 FHAFGIAALLYLVIS 214 >gi|319940826|ref|ZP_08015165.1| glutamate/aspartate transport system permease gltJ [Sutterella wadsworthensis 3_1_45B] gi|319805708|gb|EFW02489.1| glutamate/aspartate transport system permease gltJ [Sutterella wadsworthensis 3_1_45B] Length = 244 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 105/203 (51%), Gaps = 12/203 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ +A +F+++L++G + +R I+ ++ +FR PL+VQ+F+ ++ +P Sbjct: 32 TVGLAVSAFLLALVLGIIVGTLRTS-PIKIVRGACEAWIELFRNIPLIVQIFIWYFVVPE 90 Query: 84 I-----------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 I F+ I + S+ I+E +R+ I SIP+G +A+ A+G T Sbjct: 91 IIPWYKDWMIEADPAIAQFMTAFICMGFFTSSRIAEQVRAGIASIPRGLPNAAKALGFTT 150 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +T ++ILP + PL+SE ++++K+T+VA TI +PE+ A + T+Q Y Sbjct: 151 VETYVYVILPMAMRLIVPPLTSEAMNLVKNTAVAMTIGLPELTMRANEMGENTFQFFAAY 210 Query: 193 CELAFVYLILTSFCYIIQIKIES 215 +Y+++ + IES Sbjct: 211 LWATILYIVIALVVNRVMTLIES 233 >gi|311104487|ref|YP_003977340.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 5 [Achromobacter xylosoxidans A8] gi|310759176|gb|ADP14625.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 5 [Achromobacter xylosoxidans A8] Length = 237 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 59/226 (26%), Positives = 117/226 (51%), Gaps = 15/226 (6%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF-YVWIFRGTPL 70 F Q L ++T+ +A +++++L IG F A+I + T+++ I+ Y IF G P Sbjct: 5 GFVQQLATGALMTIQVAVCAYLLALAIGTFFALITL--RPTLLARIIWIPYASIFTGVPS 62 Query: 71 LVQLFVIFYGLPHI------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 L+ F+ +YG I + F+A + +L + + AY++++IRS+I ++P Sbjct: 63 LLVGFLFYYGGSEIVASLLAPFGVGQRVEITPFMAAVAALGMVYGAYLADLIRSAIQNVP 122 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 GQ++A+ + + R +ILPQ + + +++ +I +LK T++ S I + EI A Sbjct: 123 HGQFEAARVLLVPRTTIWLKVILPQMLRLALPGMTNMWIVVLKDTALISLIGLKEIMAYA 182 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 + T +P + Y A +L +T Y + ++E+ + + V Sbjct: 183 KLASGVTKEPFVYYLLAAAFFLTMTWLTYYVARRVETWAARGFHPV 228 >gi|269121061|ref|YP_003309238.1| polar amino acid ABC transporter inner membrane subunit [Sebaldella termitidis ATCC 33386] gi|268614939|gb|ACZ09307.1| polar amino acid ABC transporter, inner membrane subunit [Sebaldella termitidis ATCC 33386] Length = 239 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 82/143 (57%), Gaps = 3/143 (2%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 + ++ ++ I+ YV I RG P+ +QL + Y + G+V F+ +I +N SAY+S Sbjct: 68 YLNNPVVDTIIEEYVDILRGIPVTIQLLIFAYFILS-GVVQSKFLIAVIGFGINSSAYVS 126 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 EIIRS I S+ KGQ +A+ A+G+ ++ II+PQ + L +EFI++ K TSV Sbjct: 127 EIIRSGIESLDKGQMEAARALGMPYSMSMFEIIIPQAVRNILPALINEFIALFKETSVVG 186 Query: 168 TITIP--EIFQTAQRIVSTTYQP 188 + I ++ ++ + S Y+P Sbjct: 187 LVLINMYDLTFASKALQSKYYKP 209 >gi|254512979|ref|ZP_05125045.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodobacteraceae bacterium KLH11] gi|221532978|gb|EEE35973.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodobacteraceae bacterium KLH11] Length = 293 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 58/213 (27%), Positives = 110/213 (51%), Gaps = 37/213 (17%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W + + F LL +V T+ I+ S +++L++G + V R ++ I ++ Y+ Sbjct: 50 WHSGREEYFANLLLQGLVATVRISIYSGILALLLGTILGVARCS-ANLTIRMLARTYLEF 108 Query: 65 FRGTPLLV--------------------------------QLFVIFYGLPHIGIVFDSFV 92 R P +V Q++ F+G F S + Sbjct: 109 LRNVPPVVVVFIFFFFLSQQLIDALNLERWARGIARQEDNQIWTFFFGEMR---RFPSLI 165 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 + +I L L SA++ EI+R+ I SIPKGQ +A+ +IG++R Q +R+++LPQ + PL Sbjct: 166 SGVIVLALFESAFVGEIVRAGIQSIPKGQREAARSIGMSRLQELRYVVLPQAMKKVVPPL 225 Query: 153 SSEFISILKSTSVASTITIPEI-FQTAQRIVST 184 +++FIS++K +S+ S I++ E+ ++T + + S+ Sbjct: 226 ANQFISLIKDSSILSLISVQELTYKTVELVASS 258 >gi|170693259|ref|ZP_02884419.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170141789|gb|EDT09957.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 605 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 118/233 (50%), Gaps = 32/233 (13%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EWF + + + + TL + + I +G IA+ R+ S +++ +VW Sbjct: 67 EWF------LSEPVLSGLGRTLLLTALGASIGFALGMLIALARVSRS-PLLAGSAWVFVW 119 Query: 64 IFRGTPLLVQLF----------VIFYGLPHIGIVFDS---------FVAIIISLTLNFSA 104 +FR PL+V L I G+P GI F + F A ++ LTL+ +A Sbjct: 120 LFRSIPLIVLLLILNNLGYLYETISIGIPFTGIAFGNWPTTEVVSPFCAAVLGLTLHHAA 179 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS-SEFISILKST 163 + +E+IR I S+ +GQ +A+ A+GL R + R I+LPQ + + VP + ++ IS+ K + Sbjct: 180 FSAEVIRGGIQSVDQGQLEAAAALGLPRLRQARRIVLPQAMR-AIVPTAFNDLISLAKGS 238 Query: 164 SVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 ++ + +PE+F T Q I + PL++ + YLI+ S IQ+ +E Sbjct: 239 AMVYVLAMPELFYTVQIIYRRNLEVIPLLMVATV--WYLIILSVLSAIQVYVE 289 >gi|72160709|ref|YP_288366.1| amino acid ABC transporter inner membrane subunit [Thermobifida fusca YX] gi|71914441|gb|AAZ54343.1| amino acid ABC transporter, inner membrane subunit [Thermobifida fusca YX] Length = 212 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 95/182 (52%), Gaps = 10/182 (5%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR-IFFSDTIISLIMH 59 M ++W P LL + VT+ + + ++L++G +A++R I T + +M Sbjct: 1 MTWDW-EFTGRIIPDLL-NGLAVTVQATVLGYTLALVLGLAVALVRRIPVIGTAVFAVME 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 F R TPLLVQL +F P+ F VA+ L ++++AY +E+ RS I ++P Sbjct: 59 F----IRCTPLLVQLVFVFSLAPNTLSAFTIGVAV---LGVHYAAYTAEVYRSGIEAVPA 111 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A A+ L +T +ILPQ I PL + I++ K T + IT+ E+ A Sbjct: 112 GQWEACRALSLPLHRTWGAVILPQAIRRVIPPLGNYLIAMFKDTPLLFAITVGELMYQAS 171 Query: 180 RI 181 +I Sbjct: 172 QI 173 >gi|91780196|ref|YP_555403.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91692856|gb|ABE36053.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia xenovorans LB400] Length = 252 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 99/193 (51%), Gaps = 23/193 (11%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +TL ++ V + ++GF +A+ R S + YV IFR +PLLVQL Sbjct: 16 IWRGFAMTLALSASVAVCATLLGFALALARSAPSAALRRAAAG-YVLIFRNSPLLVQLLF 74 Query: 77 IFYGL--------------PHIGIVFD--------SFVAIIISLTLNFSAYISEIIRSSI 114 ++G PH+ ++ FVA + LT + +I E R+ + Sbjct: 75 WYFGAAVLLPDGLMNWLNTPHVVVLGPVTLSWPTFEFVAGWLGLTCYSTTFIGEEFRAGM 134 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 + GQ+ A+ A+GLTR T RH+ILPQ + + PL+ ++++++K++S+ I E+ Sbjct: 135 RGVRDGQYQAAAALGLTRFATFRHVILPQAVRIATPPLAGQYMNVIKNSSLTMAIGFAEL 194 Query: 175 FQTAQRIVSTTYQ 187 +++++ + T + Sbjct: 195 SYSSRQVETETLK 207 >gi|290476188|ref|YP_003469088.1| glutamate/aspartate ABC transporter membrane protein [Xenorhabdus bovienii SS-2004] gi|289175521|emb|CBJ82324.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Xenorhabdus bovienii SS-2004] Length = 246 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 98/174 (56%), Gaps = 14/174 (8%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ ++ ++VI+L +G ++R + ++ + YV +FR PL+VQ F+ + +P Sbjct: 31 VTVALSVCAWVIALAVGSLFGILRTV-PNKFLATLGACYVELFRNIPLIVQFFIWYLVVP 89 Query: 83 HI---------GIVFDS----FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 + D F++ +I L L +A I E +R++I S+P+GQ A A+G Sbjct: 90 EFLPKNLSNWFKMELDPNIQFFISSVICLGLFTAARICEQVRAAIQSLPRGQKAAGQAMG 149 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 LT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 150 LTLPQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 >gi|78065759|ref|YP_368528.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia sp. 383] gi|77966504|gb|ABB07884.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia sp. 383] Length = 229 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 53/227 (23%), Positives = 109/227 (48%), Gaps = 16/227 (7%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F +L+A V T+ ++ +S ++ +G AV ++ + ++ I Y + R P L Sbjct: 5 GFGPVLWAGTVQTIELSVLSLATAVALGLIGAVAKLS-HNRVLRAIATGYTTLIRSVPDL 63 Query: 72 VQLFVIFY-------------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 V + ++FY G I I D FVA +++L + AY +E R + +S+P Sbjct: 64 VLMLLLFYSIQIWLNQFTDFVGWDQIDI--DPFVAGVLTLGFIYGAYFTETFRGAFLSVP 121 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + A Sbjct: 122 RGQLEAGAAYGMSGARVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAA 181 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 Q +T+ A +YL +T+ ++ I++E + D Sbjct: 182 QDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLEKRYSMGVRHAD 228 >gi|326382187|ref|ZP_08203879.1| ABC amino acid transporter, permease component [Gordonia neofelifaecis NRRL B-59395] gi|326198917|gb|EGD56099.1| ABC amino acid transporter, permease component [Gordonia neofelifaecis NRRL B-59395] Length = 214 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 91/169 (53%), Gaps = 6/169 (3%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D+ P +L+ +TL I F++++I+G +AVIR +++ +H R TP+ Sbjct: 11 DALP-VLWDGFKITLLATVIGFLVAMILGLVVAVIR-RSGPRWLAIPVHAATEFVRLTPI 68 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 +VQL ++ LP F I L +++++Y++E+ R+ I +P GQW+A+ A+ L Sbjct: 69 VVQLLFVYALLPQ----FTPLTIGIAVLGVHYASYMAEVYRAGIEEVPVGQWEAARALSL 124 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +T R +ILPQ S L + +S+ K T TI++ E+ AQ Sbjct: 125 PGTRTWRAVILPQVARNSLPALGNNAVSMFKDTPYLFTISVVELVTAAQ 173 >gi|322386911|ref|ZP_08060535.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] gi|321269193|gb|EFX52129.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] Length = 278 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 106/206 (51%), Gaps = 15/206 (7%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI--------GI 86 +I+ AV++I + I+ I +V RGTPLLVQL + ++G+P + G Sbjct: 65 GIILAMIFAVVKINRT-RILYPIQSLFVSFLRGTPLLVQLMLTYFGIPLLLKAINQKYGT 123 Query: 87 VFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 F+ + V II+ N +AY SE IR++I+S+ G+ +A+ ++G+T +Q +I+ Sbjct: 124 AFNINAIPASVFAIIAFAFNEAAYASETIRAAILSVDPGEIEAARSLGMTNRQVYLRVII 183 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 P + L + I + K TS+A + + E+F AQ I + Y+ + ++ +Y I Sbjct: 184 PNAAVVATPTLINSLIGLTKGTSLAFSAGVVEVFAKAQAIGGSDYRYFERFISVSIIYWI 243 Query: 202 LTSFCYIIQIKIESSVT-QHTYSVDK 226 + I IE ++ + ++DK Sbjct: 244 VNIVIEQIGRAIEKAMDIKAPANLDK 269 >gi|206560950|ref|YP_002231715.1| histidine transport system permease [Burkholderia cenocepacia J2315] gi|198036992|emb|CAR52913.1| histidine transport system permease protein [Burkholderia cenocepacia J2315] Length = 237 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 102/195 (52%), Gaps = 13/195 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL + +S + + +AV R+ +S + Y ++FRGTPL VQL + + Sbjct: 22 GVAITLWLLVVSIGLGFCLSVPLAVARVS-KRKWLSGAVWLYTYVFRGTPLYVQLLLCYT 80 Query: 80 GL---------PHIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 GL P + F D +++ TLN AY +EI +I + G+ +A+ A G Sbjct: 81 GLYSLQAVRGTPMLDAFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYG 140 Query: 130 LTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 ++ R +ILP + A+PL S+E I +L +T+VA T T+P+I + A+ + S TY Sbjct: 141 MSTFTMYRRVILPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMS 199 Query: 189 LIIYCELAFVYLILT 203 + A +YL+++ Sbjct: 200 FHAFGIAALLYLVIS 214 >gi|171321441|ref|ZP_02910389.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171093287|gb|EDT38487.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 237 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 95/182 (52%), Gaps = 13/182 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-----PHI 84 V+S+ +GF +AV I S+ IS + Y ++FRGTPL VQL + + G+ H Sbjct: 31 VVSIALGFALAVPLAIARASSNRWISGPVWLYTYVFRGTPLYVQLLMCYTGIYSLQVVHN 90 Query: 85 GIVFDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 ++ D+F +++ LN AY +EI +I + G+ +A A G++R + I Sbjct: 91 HVLLDAFFRNAMNCTLLAFVLNECAYATEIFAGAIKATSAGEIEAGMAYGMSRFKLYTRI 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILP + S S+E I +L +T++A T T+P+I + + + S TY Y A +Y Sbjct: 151 ILPSALRRSLPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYMSFQAYGIAAVLY 210 Query: 200 LI 201 I Sbjct: 211 AI 212 >gi|116496267|ref|YP_808001.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei ATCC 334] gi|116106417|gb|ABJ71559.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Lactobacillus casei ATCC 334] Length = 484 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 98/181 (54%), Gaps = 2/181 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + T+ + ++ + ++G + ++ + + + +++IFRG PL+V Sbjct: 282 LMSGLEETMVLTVVAIFFATLVGILVGLLGVL-PNKFAQGVATTFIYIFRGLPLMVLALF 340 Query: 77 IFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+ G+P IG +F+A I++LTLN AY + ++ I ++ GQ +A+ ++GL + Sbjct: 341 IYTGVPSLIGSKVPAFIAGIVTLTLNEGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKA 400 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R +ILPQ I ++FI LK TS+ S I + E+ QT + I++ + I+ + Sbjct: 401 MRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGLLELTQTGKIIIARNMEGFKIWTMV 460 Query: 196 A 196 A Sbjct: 461 A 461 >gi|297380347|gb|ADI35234.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Helicobacter pylori v225d] Length = 217 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 101/187 (54%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + + S P L + +TL I+ ++SL++GF A++ ++F IS I++ Sbjct: 1 MALDW-DFMFHSIPAFL-KGLELTLYISFFGILLSLLVGFLCAIV-LYFKTRFISPIVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEISRNTPLLIQLFFLYYGLNGIGL--SALECTILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QKESALSLGFSPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQ 187 + Y+ Sbjct: 176 FIGIYYK 182 >gi|261823782|ref|YP_003261888.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261607795|gb|ACX90281.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 242 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 110/206 (53%), Gaps = 6/206 (2%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ SFP +TL ++ ++ V S ++G + V + S + S ++ + FR Sbjct: 13 LMWGSFPDGPLGGAALTLVMSLLAGVASAVLGTILGV-ALAMSRGVWSALLAMVLGFFRA 71 Query: 68 TPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P+++ +F ++ LP + G+ ++ +L L SAY++ +++ I++I +GQW A Sbjct: 72 IPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHGVKAGIVAIGRGQWQAGL 131 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVSTT 185 ++GL+R Q + I+LPQ + +++IS++K TS+A + + E+ F Q + Sbjct: 132 SLGLSRWQVLWQIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQVNNRSM 191 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQI 211 P+ ++ +A VY + FC +++ Sbjct: 192 VYPMEVFLFVALVYFV---FCLSLEL 214 >gi|91778559|ref|YP_553767.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91691219|gb|ABE34417.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia xenovorans LB400] Length = 246 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 100/182 (54%), Gaps = 24/182 (13%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL------ 81 AC+S V + ++GF +A+ +I ++ + YV +FR +PLLVQL ++G Sbjct: 28 ACVS-VCATLLGFGLAMAQIAQQRSVAA-AARLYVLVFRNSPLLVQLLFWYFGAATLLPQ 85 Query: 82 --------PHI------GIVFDSF--VAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 PH+ + + SF A + LT +A+I+E R+ I + Q+ A Sbjct: 86 PWMTWLNTPHVLGAAPFALHWPSFELFAGWLGLTCYSTAFIAEEFRAGIRGVGIAQYQAG 145 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G+TR T+RH+ILPQ + + PL+ ++++I+K++S+ I + E+ ++++ + + Sbjct: 146 AALGMTRYTTLRHVILPQAVRIATPPLAGQYMNIVKNSSLTMAIGVAELSYMSRQVDTES 205 Query: 186 YQ 187 ++ Sbjct: 206 FR 207 >gi|227892710|ref|ZP_04010515.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] gi|227865487|gb|EEJ72908.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] Length = 219 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 72/140 (51%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 +F I+S I YV + R TPLL+QLF ++Y P IG S A II L Y++ Sbjct: 43 YFKTPILSQIATAYVELARNTPLLIQLFFLYYAFPVIGWRMSSITAGIIGLIFLGGGYMA 102 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E + Q ++ A+G+ R Q R+++ PQ S L++ I ++K TS+ + Sbjct: 103 EGFTGGFQGVTDSQINSGEALGMNRFQLARYVVFPQGFALSMPALAANVIFLIKETSIFT 162 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I IPE+ TA ++ Y+ Sbjct: 163 VIAIPELTNTALDLIGMYYR 182 >gi|161613903|ref|YP_001587868.1| hypothetical protein SPAB_01641 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168462915|ref|ZP_02696846.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194442222|ref|YP_002040882.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449438|ref|YP_002045674.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|198244904|ref|YP_002215514.1| putative ABC transporter permease [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389861|ref|ZP_03216472.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205356977|ref|ZP_02343642.2| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205358954|ref|ZP_02666121.2| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205360235|ref|ZP_02682142.2| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|161363267|gb|ABX67035.1| hypothetical protein SPAB_01641 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194400885|gb|ACF61107.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407742|gb|ACF67961.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|195634085|gb|EDX52437.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197939420|gb|ACH76753.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602306|gb|EDZ00852.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205325120|gb|EDZ12959.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205339172|gb|EDZ25936.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205350800|gb|EDZ37431.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|326623260|gb|EGE29605.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 215 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 99/186 (53%), Gaps = 1/186 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L I TL + F+ + + G +AV+R S + I+ V+I RG P+L+ +F+ Sbjct: 13 LLEGIGNTLLVTFTCFLSAFLFGLTVAVLR-RLSPLPLQKILDVLVFILRGIPILIAVFL 71 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GLP IGI VA+ +S+ L +Y++E+ R ++ + + + G+ + Q I Sbjct: 72 VYFGLPSIGIYVSPLVAMNLSVGLISGSYLAEVFRGALKLVEPYEITVAKVAGMRQLQVI 131 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +I LPQ + S + +EF S+LK+T A T+ I EI + A + + T L IY Sbjct: 132 INIELPQMLRFSVPGIINEFSSVLKATPFAYTVGIAEITKQAMSLTAITLNGLQIYTLAG 191 Query: 197 FVYLIL 202 +Y I+ Sbjct: 192 VLYFII 197 >gi|315038759|ref|YP_004032327.1| glutamine ABC transporter membrane spanning permease [Lactobacillus amylovorus GRL 1112] gi|325957197|ref|YP_004292609.1| polar amino acid transport system permease protein [Lactobacillus acidophilus 30SC] gi|312276892|gb|ADQ59532.1| glutamine ABC transporter membrane spanning permease [Lactobacillus amylovorus GRL 1112] gi|325333762|gb|ADZ07670.1| polar amino acid transport system permease protein [Lactobacillus acidophilus 30SC] gi|327183919|gb|AEA32366.1| polar amino acid transport system permease protein [Lactobacillus amylovorus GRL 1118] Length = 219 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 72/140 (51%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 +F I+S I YV + R TPLL+QLF ++Y P IG S A II L Y++ Sbjct: 43 YFKTPILSQIATAYVELARNTPLLIQLFFLYYAFPVIGWRMSSITAGIIGLIFLGGGYMA 102 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E + Q ++ A+G+ R Q R+++ PQ S L++ I ++K TS+ + Sbjct: 103 EGFTGGFQGVTDSQINSGEALGMNRFQLARYVVFPQGFALSMPALAANVIFLIKETSIFT 162 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I IPE+ TA ++ Y+ Sbjct: 163 VIAIPELTNTALDLIGMYYR 182 >gi|170733746|ref|YP_001765693.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169816988|gb|ACA91571.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 237 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 102/195 (52%), Gaps = 13/195 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL + +S + + +AV R+ +S + Y ++FRGTPL VQL + + Sbjct: 22 GVAITLWLLVVSIGLGFCLSVPLAVARVS-KKKWLSGAVWLYTYVFRGTPLYVQLLLCYT 80 Query: 80 GL---------PHIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 GL P + F D +++ TLN AY +EI +I + G+ +A+ A G Sbjct: 81 GLYSLQAVRGTPMLDAFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYG 140 Query: 130 LTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 ++ R +ILP + A+PL S+E I +L +T+VA T T+P+I + A+ + S TY Sbjct: 141 MSPFTMYRRVILPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMS 199 Query: 189 LIIYCELAFVYLILT 203 + A +YL+++ Sbjct: 200 FHAFGIAALLYLVIS 214 >gi|258541040|ref|YP_003175539.1| glutamine ABC transporter substrate-binding protein [Lactobacillus rhamnosus Lc 705] gi|257152716|emb|CAR91688.1| ABC transporter, glutamine-binding periplasmic protein [Lactobacillus rhamnosus Lc 705] Length = 484 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 105/197 (53%), Gaps = 11/197 (5%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 +K W L+ L +V+T+ + ++ ++IGF + VI + + I Sbjct: 275 LKANWSTLM-----DGLRETMVLTIVAIFFATLVGILIGF-LGVI----PNKLCQGIATT 324 Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +++IFRG PL+V I+ G+P IG +F+A I++LTLN AY + ++ I ++ Sbjct: 325 FIYIFRGLPLMVLALFIYTGVPSLIGSKVPAFIAGIVTLTLNEGAYTAAFVKGGIQAVDP 384 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ ++GL + +R +ILPQ I ++FI LK TS+ S I + E+ QT + Sbjct: 385 GQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGLLELTQTGK 444 Query: 180 RIVSTTYQPLIIYCELA 196 I++ + I+ +A Sbjct: 445 IIIARNMEGFKIWTMVA 461 >gi|188527954|ref|YP_001910641.1| glutamine ABC transporter, permease protein [Helicobacter pylori Shi470] gi|188144194|gb|ACD48611.1| glutamine ABC transporter, permease protein [Helicobacter pylori Shi470] gi|308063952|gb|ADO05839.1| glutamine ABC transporter, permease protein [Helicobacter pylori Sat464] Length = 217 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 100/187 (53%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + + S P L + +TL I+ ++SL++GF A++ ++F IS I++ Sbjct: 1 MALDW-DFMFHSIPAFL-KGLELTLYISFFGILLSLLVGFLCAIV-LYFKTRFISPIVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEISRNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QKESALSLGFGPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQ 187 + Y+ Sbjct: 176 FIGIYYK 182 >gi|327461006|gb|EGF07339.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1057] Length = 219 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 109/196 (55%), Gaps = 15/196 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I+ IS V+S I G +AV+R + ++ LI Y+ R P L+ +F IF Sbjct: 22 LTLQISFISIVLSTIFGTILAVMR-NGKNKLLKLIASIYIEFVRNVPNLLWIFTIF---- 76 Query: 83 HIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 +VF S A IIS T+ SA ++EIIR + +I GQ +A + G T+ Q +R+II Sbjct: 77 ---LVFQIKSTPAGIISFTVFTSAALAEIIRGGLNAIDSGQTEAGLSQGFTQFQILRYII 133 Query: 141 LPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 LPQ I + S+F++++K TS+ S I + E+F +AQ ++ ++ ++ +Y Sbjct: 134 LPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFA----LY 189 Query: 200 LILTSFCYIIQIKIES 215 L++ + ++I I S Sbjct: 190 LLVAAIYFLINFAISS 205 >gi|227532737|ref|ZP_03962786.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227189571|gb|EEI69638.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 496 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 98/181 (54%), Gaps = 2/181 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + T+ + ++ + ++G + ++ + + + +++IFRG PL+V Sbjct: 294 LMSGLEETMVLTVVAIFFATLVGILVGLLGVL-PNKFAQGVATTFIYIFRGLPLMVLALF 352 Query: 77 IFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+ G+P IG +F+A I++LTLN AY + ++ I ++ GQ +A+ ++GL + Sbjct: 353 IYTGVPSLIGSKVPAFIAGIVTLTLNEGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKA 412 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R +ILPQ I ++FI LK TS+ S I + E+ QT + I++ + I+ + Sbjct: 413 MRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGLLELTQTGKIIIARNMEGFKIWTMV 472 Query: 196 A 196 A Sbjct: 473 A 473 >gi|332716152|ref|YP_004443618.1| amino acid ABC transporter membrane spanning protein [Agrobacterium sp. H13-3] gi|325062837|gb|ADY66527.1| amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 260 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 6/124 (4%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV------AIIISLTLNFSAYISEIIRSSI 114 YV IFR P LV +F Y P + F +++ ++ L + SA+I+EI R +I Sbjct: 92 YVQIFRNAPHLVLIFAATYIFPFEIVAFGNYIPFPDWIKAVVGLAIPASAHIAEITRGAI 151 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 SIP QW+A+ +G +R QT+R IILPQ + S P + + SI T++AS + + E+ Sbjct: 152 QSIPTAQWEAAQGLGFSRNQTLRWIILPQCVKRSLPPWMNLYASITMGTALASLVGVHEL 211 Query: 175 FQTA 178 A Sbjct: 212 LHAA 215 >gi|323350547|ref|ZP_08086209.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] gi|322123229|gb|EFX94914.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] Length = 230 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 88/149 (59%), Gaps = 10/149 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-----IGIVFDSF---VAIIISLTLNFSAYISEIIRS 112 Y++I R TP +V LF++FYG+P +G+ +++ V +II++ L F+A I+E+ ++ Sbjct: 59 YIFILRCTPPIVLLFLVFYGIPEFLEWWLGLDINNWSRTVFVIITMILLFAAMIAEVFKA 118 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +++PKGQ +A +IGLT QT I+LPQ + L++ +++++ ++A TI Sbjct: 119 AYLAVPKGQTEAGLSIGLTPAQTFLRIVLPQAFRIALPNLTTALLNLMRDAALAYTIGAV 178 Query: 173 EIFQTAQRIVSTTYQ--PLIIYCELAFVY 199 ++ Q ++S L Y +A +Y Sbjct: 179 DVMGAGQNLISRNLGNYSLETYTAVALIY 207 >gi|319899029|ref|YP_004159122.1| ABC transporter, permease protein [Bartonella clarridgeiae 73] gi|319402993|emb|CBI76548.1| ABC transporter, permease protein [Bartonella clarridgeiae 73] Length = 233 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 52/198 (26%), Positives = 108/198 (54%), Gaps = 15/198 (7%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A + ++L + CI ++ L +G A++ I + I+ I + +FRG P L+ LF+++ Sbjct: 23 AGMTLSLALCCI--IVGLPLGLLNAIM-IQSNIKIVKAIATLFSSVFRGLPELLTLFLVY 79 Query: 79 YGLPH-IGIVFD-----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 YGL + I +FD +F+A +++ ++ F+A+ E+ + K Q++A+ Sbjct: 80 YGLQNFIQAIFDFLNIEIIFSINAFIAGVLAFSMVFAAFSCEVWLGAFRIFDKSQYEAAQ 139 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 +GL+ T I+ PQ I + LS+ ++++LK TS+ STI++ ++ + + T Sbjct: 140 VLGLSCSTTFFRIVFPQLIRNALPGLSNNWLTLLKDTSLVSTISLLDLMRQTNLAAAATN 199 Query: 187 QPLIIYCELAFVYLILTS 204 +P++ Y +YL+ ++ Sbjct: 200 EPILFYLLACLIYLLFSA 217 >gi|302188856|ref|ZP_07265529.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. syringae 642] gi|330949983|gb|EGH50243.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Pseudomonas syringae Cit 7] Length = 236 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 96/182 (52%), Gaps = 13/182 (7%) Query: 35 SLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL---------P 82 S+ IGF +++ I + + + FY ++FRGTPL +QL + + G+ P Sbjct: 33 SIAIGFCVSIPLSIARVSKNRWVRWPVQFYTYLFRGTPLYIQLLICYTGIYSIAAVREQP 92 Query: 83 HIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + F D+ I++ TLN AY +EI +I S+ G+ +A+ A GLT + ++I+ Sbjct: 93 MLDAFFRDAMNCTILAFTLNTCAYTTEIFAGAIRSMAHGEVEAAKAYGLTGWKLYAYVIM 152 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 P + S S+E I +L ST+VA T T+P+I + A+ S T+ + A +YL Sbjct: 153 PSVLRRSLPYYSNEVILMLHSTTVAFTATVPDILKVARDANSATFMTFQSFGIAAVMYLT 212 Query: 202 LT 203 +T Sbjct: 213 VT 214 >gi|301067874|ref|YP_003789897.1| amino acid ABC transporter/signal transduction system periplasmic protein [Lactobacillus casei str. Zhang] gi|300440281|gb|ADK20047.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus casei str. Zhang] Length = 487 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 98/181 (54%), Gaps = 2/181 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + T+ + ++ + ++G + ++ + + + +++IFRG PL+V Sbjct: 285 LMSGLEETMVLTVVAIFFATLVGILVGLLGVL-PNKFAQGVATTFIYIFRGLPLMVLALF 343 Query: 77 IFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+ G+P IG +F+A I++LTLN AY + ++ I ++ GQ +A+ ++GL + Sbjct: 344 IYTGVPSLIGSKVPAFIAGIVTLTLNEGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKA 403 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R +ILPQ I ++FI LK TS+ S I + E+ QT + I++ + I+ + Sbjct: 404 MRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGLLELTQTGKIIIARNMEGFKIWTMV 463 Query: 196 A 196 A Sbjct: 464 A 464 >gi|291550028|emb|CBL26290.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Ruminococcus torques L2-14] Length = 228 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 18/178 (10%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI--------GIVFDSFVAIIISLTLNFSAY 105 +S I + VWI RGTPL++Q+ +I+Y P + G F+A ++ N++ Y Sbjct: 51 LSYITNIIVWIVRGTPLMIQMLIIYY-FPGLVLGNPIWGGGESGRFLAASVAFIFNYACY 109 Query: 106 ISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 S I R I IP+GQ +A +G+T+ Q + L Q + P+S+E I+++K TS+ Sbjct: 110 FSVIYRGGIQGIPQGQTEAGLVLGMTKHQIFFKVKLLQMVKRIVPPMSNEIITLVKDTSL 169 Query: 166 ASTITIPEI------FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 A I + EI F + +S P+ AF YLI ++ K+E + Sbjct: 170 ARIIALQEIIWAGQAFLKGSQGISGAIWPMFF---TAFYYLIFNGILTVLLGKLEKKL 224 >gi|104782883|ref|YP_609381.1| arginine/ornithine transport protein AotQ [Pseudomonas entomophila L48] gi|95111870|emb|CAK16594.1| arginine/ornithine transport protein AotQ (membrane) [Pseudomonas entomophila L48] Length = 229 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 100/194 (51%), Gaps = 13/194 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 +TL +A S +++++G +R+ ++ + Y + RG P LV + +IFYG Sbjct: 15 LTLQLALSSMALAIVLGLVGVALRLS-PVRWLAWLGDLYSTVIRGIPDLVLILLIFYGGQ 73 Query: 81 ------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P +G I + VA I +L F AY+SE R + + IPKGQ +A A G+ Sbjct: 74 DLLNRVAPLLGYDDYIDLNPLVAGIGTLGFIFGAYLSETFRGAFLGIPKGQAEAGAAYGM 133 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + Q I++PQ I + ++ ++ + K+T++ S + + ++ A++ T +P Sbjct: 134 SGVQVFFRIMVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATREPFT 193 Query: 191 IYCELAFVYLILTS 204 + +A +YL+LTS Sbjct: 194 FFLAVAALYLVLTS 207 >gi|258509857|ref|YP_003172608.1| ABC transporter glutamine-binding periplasmic protein [Lactobacillus rhamnosus GG] gi|257149784|emb|CAR88757.1| ABC transporter, glutamine-binding periplasmic protein [Lactobacillus rhamnosus GG] Length = 484 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 97/181 (53%), Gaps = 2/181 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + T+ + ++ + ++G I + + + + I +++IFRG PL+V Sbjct: 282 LMGGLRETMVLTIVAIFFATLVGILIGFLGVI-PNKLCQGIATTFIYIFRGLPLMVLALF 340 Query: 77 IFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+ G+P IG +F+A I++LTLN AY + ++ I ++ GQ +A+ ++GL + Sbjct: 341 IYTGVPSLIGSKVPAFIAGIVTLTLNEGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKA 400 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R +ILPQ I ++FI LK TS+ S I + E+ QT + I++ + I+ + Sbjct: 401 MRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGLLELTQTGKIIIARNMEGFKIWTMV 460 Query: 196 A 196 A Sbjct: 461 A 461 >gi|146342963|ref|YP_001208011.1| glutamate/aspartate ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146195769|emb|CAL79796.1| glutamate/aspartate ABC transporter (permease protein) [Bradyrhizobium sp. ORS278] Length = 230 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 10/203 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I S L + TL + +S L+ G IA++R+ ++ I YV Sbjct: 7 FDVIRRSLSYLFIDGMTFTLTLTALSAFGGLVFGTLIAMMRLS-GYRVMGWIAGLYVDFM 65 Query: 66 RGTPLLVQLFVIFYGLPHIG---------IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 R PL++ +F ++ +P+IG I +F + +I+ + +AY SEI+R+ I S Sbjct: 66 RSLPLVLVIFWFYFLVPYIGQWITGSSRPIKVGAFASSLITFIMFEAAYFSEIMRAGIQS 125 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ A+ A+GLT QT+R+++LPQ L ++ I + + TS+ ++IP+ Sbjct: 126 ISRGQPAAASALGLTYAQTMRYVVLPQAFRNMLPVLLTQTIVLFQDTSLVYVLSIPDFLG 185 Query: 177 TAQRIVSTTYQPLIIYCELAFVY 199 A ++ + + +Y A VY Sbjct: 186 AASKVAQRDGRLVEMYLFAALVY 208 >gi|161524063|ref|YP_001579075.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189351176|ref|YP_001946804.1| polar amino acid transporter permease [Burkholderia multivorans ATCC 17616] gi|221199370|ref|ZP_03572414.1| histidine ABC transporter, permease protein HisM [Burkholderia multivorans CGD2M] gi|221205728|ref|ZP_03578743.1| histidine ABC transporter, permease protein HisM [Burkholderia multivorans CGD2] gi|221211583|ref|ZP_03584562.1| histidine ABC transporter, permease protein HisM [Burkholderia multivorans CGD1] gi|160341492|gb|ABX14578.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189335198|dbj|BAG44268.1| polar amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] gi|221168944|gb|EEE01412.1| histidine ABC transporter, permease protein HisM [Burkholderia multivorans CGD1] gi|221174566|gb|EEE06998.1| histidine ABC transporter, permease protein HisM [Burkholderia multivorans CGD2] gi|221180655|gb|EEE13058.1| histidine ABC transporter, permease protein HisM [Burkholderia multivorans CGD2M] Length = 237 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 101/194 (52%), Gaps = 11/194 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL + +S + + +AV R+ +S + Y ++FRGTPL VQL + + Sbjct: 22 GVAITLWLLVVSIGLGFCLSVPLAVARVS-KRKWLSRAVWLYTYVFRGTPLYVQLLLCYT 80 Query: 80 GLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 GL + +V D+F +++ TLN AY +EI +I + G+ +A+ A G Sbjct: 81 GLYSLQVVRGTPMLDAFFREGMNCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYG 140 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 ++ R +ILP + S S+E I +L +T+VA T T+P+I + A+ + S TY Sbjct: 141 MSTFTMYRRVILPSALRRSLPLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMSF 200 Query: 190 IIYCELAFVYLILT 203 + A +YL+++ Sbjct: 201 HAFGIAALLYLVIS 214 >gi|93005166|ref|YP_579603.1| amino acid ABC transporter permease [Psychrobacter cryohalolentis K5] gi|92392844|gb|ABE74119.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Psychrobacter cryohalolentis K5] Length = 248 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 14/190 (7%) Query: 27 IACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP---- 82 I I++ I++++G ++R + I YV FR PLLVQLF FY P Sbjct: 35 IGSIAWAIAMVVGTIFGIMRTL-PNKGARAIGTAYVTFFRNIPLLVQLFFWFYIAPGWLT 93 Query: 83 ---------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 + + ++ I L L +A I E +R+ I S+P+GQ +A+YA+G + Sbjct: 94 PSIQEWWYKDLSPNTSAMLSASIGLGLFTAARIVEQVRTGIESLPQGQINAAYALGFSIP 153 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q + ++LPQ PLSSE + K+ SVAS + + E+ + I T L IY Sbjct: 154 QAYKEVLLPQAFRIILPPLSSELTNCFKNASVASLVGVMELISQTKTISEYTQNSLEIYT 213 Query: 194 ELAFVYLILT 203 +YL+ Sbjct: 214 YATIIYLVFN 223 >gi|325686600|gb|EGD28626.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK72] gi|327462743|gb|EGF09065.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1057] gi|332359990|gb|EGJ37804.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1056] Length = 230 Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 88/149 (59%), Gaps = 10/149 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-----IGIVFDSF---VAIIISLTLNFSAYISEIIRS 112 Y++I R TP +V LF++FYG+P +G+ +++ V +II++ L F+A I+E+ ++ Sbjct: 59 YIFILRCTPPIVLLFLVFYGIPEFLEWWLGLDINNWSRTVFVIITMILLFAAMIAEVFKA 118 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +++PKGQ +A +IGLT QT I+LPQ + L++ +++++ ++A TI Sbjct: 119 AYLAVPKGQTEAGLSIGLTPAQTFLRIVLPQAFRIALPNLTTALLNLMRDAALAYTIGAV 178 Query: 173 EIFQTAQRIVSTTYQ--PLIIYCELAFVY 199 ++ Q ++S L Y +A +Y Sbjct: 179 DVMGAGQNLISRNLGNYSLETYTAVALIY 207 >gi|317011367|gb|ADU85114.1| glutamine ABC transporter, permease protein [Helicobacter pylori SouthAfrica7] Length = 217 Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 57/187 (30%), Positives = 102/187 (54%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + + S P L + +TL I+ + ++SLI+GF AV+ ++F IS I++ Sbjct: 1 MALDW-DFMYRSIPAFL-KGLELTLYISFLGILLSLIVGFLSAVV-LYFKTRFISPIVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQLFFLYYGLNIIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QRESALSLGFSPLKLLYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQ 187 + Y+ Sbjct: 176 FIGIYYK 182 >gi|227821878|ref|YP_002825848.1| putative amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] gi|227340877|gb|ACP25095.1| putative amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 384 Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 49/158 (31%), Positives = 91/158 (57%), Gaps = 6/158 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFV 76 + ++VTL ++ + +SL +G +A+ R SD +I ++ ++ I RG PL+ LF+ Sbjct: 173 WGGLMVTLALSFVGIAVSLPLGILLALGRR--SDMPVIKMLCTVFIEIVRGIPLITVLFM 230 Query: 77 IFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G+ FD F+ +I ++ SAY++E++R + +IPKGQ++ + ++GL+ Sbjct: 231 ASVMLPLFLPQGVTFDKFLRALIGVSFFASAYMAEVVRGGLQAIPKGQYEGADSLGLSYW 290 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 Q + I+LPQ + + + FI + K TS+ S I + Sbjct: 291 QKMNLIVLPQALKLVIPGIVNTFIGLFKDTSLVSIIGM 328 >gi|239630723|ref|ZP_04673754.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239527006|gb|EEQ66007.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 484 Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 98/181 (54%), Gaps = 2/181 (1%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + T+ + ++ + ++G + ++ + + + +++IFRG PL+V Sbjct: 282 LMSGLEETMVLTVVAIFFATLVGILVGLLGVL-PNKFAQGVATTFIYIFRGLPLMVLALF 340 Query: 77 IFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+ G+P IG +F+A I++LTLN AY + ++ I ++ GQ +A+ ++GL + Sbjct: 341 IYTGVPSLIGSKVPAFIAGIVTLTLNEGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKA 400 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R +ILPQ I ++FI LK TS+ S I + E+ QT + I++ + I+ + Sbjct: 401 MRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGLLELTQTGKIIIARNMEGFKIWTMV 460 Query: 196 A 196 A Sbjct: 461 A 461 >gi|171322527|ref|ZP_02911319.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171092142|gb|EDT37551.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 237 Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 103/195 (52%), Gaps = 13/195 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL + +S + + +AV R+ +S + Y ++FRGTPL VQL + + Sbjct: 22 GVAITLWLLVVSIGLGFCLSVPLAVARVS-KKKWLSRAVWLYTYVFRGTPLYVQLLLCYT 80 Query: 80 GLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 GL + V DSF +++ TLN AY +EI +I + G+ +A+ A G Sbjct: 81 GLYSLQFVRGTPLLDSFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYG 140 Query: 130 LTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 ++ R +ILP + A+PL S+E I +L +T+VA T T+P+I + A+ + S TY Sbjct: 141 MSTFTMYRRVILPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMS 199 Query: 189 LIIYCELAFVYLILT 203 + A +YL+++ Sbjct: 200 FHAFGIAALLYLVIS 214 >gi|15645783|ref|NP_207960.1| glutamine ABC transporter, permease protein (glnP) [Helicobacter pylori 26695] gi|2314328|gb|AAD08215.1| glutamine ABC transporter, permease protein (glnP) [Helicobacter pylori 26695] Length = 217 Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 106/201 (52%), Gaps = 5/201 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + + S P + + +TL I+ ++SL++GF A++ ++F +S +++ Sbjct: 1 MALDW-DFMFHSIPAF-FKGLELTLYISFFGILLSLLVGFLCAIV-LYFKTRFLSPVVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QRESALSLGFSPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQPLIIYCELAFVYLI 201 + Y+ L+ YLI Sbjct: 176 FIGIYYKTTESLLMLSLTYLI 196 >gi|261400796|ref|ZP_05986921.1| amino acid ABC transporter, permease protein [Neisseria lactamica ATCC 23970] gi|269209398|gb|EEZ75853.1| amino acid ABC transporter, permease protein [Neisseria lactamica ATCC 23970] Length = 222 Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 58/192 (30%), Positives = 102/192 (53%), Gaps = 8/192 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIG-FFIAVIRIFFSDTIISLIMH 59 M +EW L L +++T I+ IS S ++G F V+R + ++ LI Sbjct: 1 MAFEW--LFEGKNAARLGEGLLLTAQISLISVAASCVLGTLFGLVLRS--RNRLVRLIGR 56 Query: 60 FYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 FY+ R P+LV LF +++GL GI F + TL A + +++R ++ SI Sbjct: 57 FYLETIRIVPILVWLFGLYFGLSVWTGIHIGGFWVCVWVFTLWGIAEMGDLVRGALESIE 116 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 K Q ++ A+GL+R+Q R+I LPQ++ + + F ++K++S+AS I + E+ + Sbjct: 117 KHQVESGLALGLSRRQVFRYIELPQSVRRALPGAVNLFTRMIKTSSLASLIGVIEVVKVG 176 Query: 179 QRIVSTTY--QP 188 Q+I+ + QP Sbjct: 177 QQIIENSLLTQP 188 >gi|51891626|ref|YP_074317.1| amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] gi|51855315|dbj|BAD39473.1| amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] Length = 219 Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 109/204 (53%), Gaps = 19/204 (9%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EW N+ + + +++TL I+ ++ V S +G + V+R + + + I Y+ Sbjct: 10 EWHNV------RFMLDGLLITLRISALTIVFSFFLGTLLGVMR-YSGHWLFARIAAVYIE 62 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FR +PL++ + + + +P + DS +++TL +A + EI+R + S+ KGQW+ Sbjct: 63 SFRASPLILLILLFRFTMPMKPV--DSGT---LAMTLFTAAIVGEIVRGGLNSVDKGQWE 117 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV- 182 A+ + G T QT++HI+LPQ + PL+ +FI+++K TS + E+ T + ++ Sbjct: 118 AARSQGFTWWQTMQHIVLPQALRKMIPPLTGQFITVVKDTSYVWVTGVQEL--TGKGVII 175 Query: 183 ----STTYQPLIIYCELAFVYLIL 202 +T Q I+ + +Y +L Sbjct: 176 LGKHGSTVQFFAIFGTIGLIYYVL 199 >gi|325271440|ref|ZP_08137965.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] gi|324103422|gb|EGC00744.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] Length = 229 Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 104/204 (50%), Gaps = 18/204 (8%) Query: 18 YAAIVV-----TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 Y A+++ TL +A S +++++G +R+ ++ + Y + RG P LV Sbjct: 5 YGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLS-PVRWLAWLGDLYSTVIRGIPDLV 63 Query: 73 QLFVIFYG--------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + +IFYG P +G I + +A I +L F AY+SE R + + IPKG Sbjct: 64 LILLIFYGGQDIINRVAPLLGYEDYIDLNPLIAGIGTLGFIFGAYLSETFRGAFLGIPKG 123 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A G++ +Q I +PQ I + ++ ++ + K+T++ S + + ++ A++ Sbjct: 124 QAEAGLAYGMSARQVFFRIQVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQ 183 Query: 181 IVSTTYQPLIIYCELAFVYLILTS 204 T +P + +A +YL+LTS Sbjct: 184 AADATREPFTFFLAVAALYLVLTS 207 >gi|266625817|ref|ZP_06118752.1| ABC transporter, permease protein, polar amino acid uptake family [Clostridium hathewayi DSM 13479] gi|288862281|gb|EFC94579.1| ABC transporter, permease protein, polar amino acid uptake family [Clostridium hathewayi DSM 13479] Length = 200 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 79/140 (56%), Gaps = 13/140 (9%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLP--------HIGIVFD-----SFVAIIISLT 99 ++S I +V RG P+++ L+V +Y LP IG FD V I +LT Sbjct: 14 VVSQICAVFVSFMRGVPMVILLYVAYYALPVMVYSYGVSIGREFDVSVVPPAVYAIAALT 73 Query: 100 LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISI 159 L+ +AY SEI R+++ ++ +GQ +A+Y++G+T+ Q + I+ PQ + + L F+ + Sbjct: 74 LDQAAYSSEIFRAALGAVDEGQREAAYSVGMTKLQAMTRIVFPQAMAVAMPNLGGLFLGL 133 Query: 160 LKSTSVASTITIPEIFQTAQ 179 +K TS+A + + EI TA Sbjct: 134 VKGTSLAYYVGVYEITATAN 153 >gi|187921004|ref|YP_001890036.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187719442|gb|ACD20665.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 265 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 94/161 (58%), Gaps = 4/161 (2%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+++S P L+ +V TL ++ IS + ++ G +A+ + + ++ + +V +FRG Sbjct: 13 LLVESLPALIGTGLVNTLILSVISAALGIVAGMALALCAVSHTR-WLTWPVRVFVDVFRG 71 Query: 68 TPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 P + + V+ GL IG+ + + I++L L SAYI+EI RS I S+ +GQ A Sbjct: 72 LPAALVILVVGQGLAPIGLSLFGPNPYPLAIVALALVSSAYIAEIFRSGIQSVGRGQMSA 131 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 A+G+T +R++I+PQ + L+++FISI+K +S+ Sbjct: 132 CQALGMTYWSGMRYVIVPQGVRRILPALANQFISIVKDSSL 172 >gi|71733796|ref|YP_273643.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|257486646|ref|ZP_05640687.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289625250|ref|ZP_06458204.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647247|ref|ZP_06478590.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298488753|ref|ZP_07006781.1| histidine transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71554349|gb|AAZ33560.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298156671|gb|EFH97763.1| histidine transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320325645|gb|EFW81707.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320327072|gb|EFW83086.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330867261|gb|EGH01970.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330984856|gb|EGH82959.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010124|gb|EGH90180.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 236 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 96/182 (52%), Gaps = 13/182 (7%) Query: 35 SLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL---------P 82 S+ IGF +++ I + + + FY ++FRGTPL +QL + + G+ P Sbjct: 33 SIAIGFCVSIPLSIARVSKNRWVRWPVQFYTYLFRGTPLYIQLLICYTGIYSIAAVREQP 92 Query: 83 HIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + F D+ I++ TLN AY +EI +I S+ G+ +A+ A GLT + ++I+ Sbjct: 93 MLDAFFRDAMNCTILAFTLNTCAYTTEIFAGAIRSMAHGEVEAAKAYGLTGWKLYAYVIM 152 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 P + S S+E I +L ST+VA T T+P+I + A+ S T+ + A +YL Sbjct: 153 PSVLRRSLPYYSNEVILMLHSTTVAFTATVPDILKVARDANSATFMTFQSFGIAAVMYLT 212 Query: 202 LT 203 +T Sbjct: 213 VT 214 >gi|319939693|ref|ZP_08014052.1| amino acid ABC transporter permease [Streptococcus anginosus 1_2_62CV] gi|319811282|gb|EFW07588.1| amino acid ABC transporter permease [Streptococcus anginosus 1_2_62CV] Length = 269 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 110/222 (49%), Gaps = 19/222 (8%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + D P+++ L +F LI+ A+++I I+ + F+V RGT Sbjct: 31 VFDGLPRIIEKLPTTLLLTLGGAF-FGLILALIFAIVKIN-RVKILYPLQAFFVSFLRGT 88 Query: 69 PLLVQLFVIFYGLP----HIGIVFDSFVAI---------IISLTLNFSAYISEIIRSSII 115 P+LVQL + +YG+P I + F + + I I++ N +AY SE IR++I+ Sbjct: 89 PVLVQLMLTYYGIPLLLKAINLRFGTGLNINAIPAYLFAIVAFAFNEAAYASETIRAAIL 148 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ G+ +A+ ++G+T Q +I+P + L + I + K TS+A + + EIF Sbjct: 149 SVDAGEIEAARSLGMTNGQVYCRVIIPNAAVVATPTLINSLIGLTKGTSLAFSAGVVEIF 208 Query: 176 QTAQRIVSTTYQPLIIYCELAFVY----LILTSFCYIIQIKI 213 AQ + Y+ + +A VY +++ +F I+ K+ Sbjct: 209 AQAQILGGADYRYFERFISVALVYWGVNIVIEAFGRFIEKKM 250 >gi|194734145|ref|YP_002114660.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194709647|gb|ACF88868.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] Length = 215 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 98/186 (52%), Gaps = 1/186 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L I TL + F+ + G +AV+R S + I+ V+I RG P+L+ +F+ Sbjct: 13 LLEGIGNTLLVTFTCFLSAFFTGLTVAVLR-RLSPLPLQKILDVLVFILRGIPILIAVFL 71 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GLP IGI VA+ +S+ L +Y++E+ R ++ + + + G+ + Q I Sbjct: 72 VYFGLPSIGIYVSPLVAMNLSVGLISGSYLAEVFRGALKLVEPFEITVAKVAGMRQLQVI 131 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +I LPQ + S + +EF S+LK+T A T+ I EI + A + + T L IY Sbjct: 132 VNIELPQMLRFSVPGIINEFSSVLKATPFAYTVGIAEITKQAMSLTAITLNGLQIYTLAG 191 Query: 197 FVYLIL 202 +Y I+ Sbjct: 192 LLYFII 197 >gi|148655937|ref|YP_001276142.1| polar amino acid ABC transporter inner membrane subunit [Roseiflexus sp. RS-1] gi|148568047|gb|ABQ90192.1| polar amino acid ABC transporter, inner membrane subunit [Roseiflexus sp. RS-1] Length = 216 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 100/181 (55%), Gaps = 2/181 (1%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ + ++ ++IG +A+ R++ ++ + + Y + R P++V +F++F+ + Sbjct: 20 VTISVTAVALTTGVVIGIVLAIARVYGHPSL-QVAVTVYSVVIRAVPVIVIIFILFFVIS 78 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + F A ++L AY +EI R ++ ++ GQ A+ AIG++R Q I+ ++LP Sbjct: 79 RY-VNLSPFWAGALALGFASGAYQTEIFRGALQAVQPGQMIAARAIGMSRLQAIQSVVLP 137 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + + +E +LK +++ + +PEI + AQ++ + T++P + + +YL L Sbjct: 138 QALRLALPAWGNEATLVLKDSTLVFAVGVPEILRRAQQVSARTFEPFLAFGVALLLYLAL 197 Query: 203 T 203 T Sbjct: 198 T 198 >gi|148546354|ref|YP_001266456.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida F1] gi|167035335|ref|YP_001670566.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|148510412|gb|ABQ77272.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida F1] gi|166861823|gb|ABZ00231.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 248 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 52/158 (32%), Positives = 91/158 (57%), Gaps = 15/158 (9%) Query: 36 LIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI---GI------ 86 L++G + V+R + ++S I YV +FR PLLVQLF+ ++ +P + G+ Sbjct: 44 LLLGSVLGVMRTV-PNRLVSGIATAYVELFRNVPLLVQLFIWYFLVPDLLPEGLQEWFKQ 102 Query: 87 ----VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + ++++I L L +A + E +R+ I ++PKGQ A+ A+G + Q +++LP Sbjct: 103 DLNPTTSALISVVICLGLFTAARVCEQVRTGIQALPKGQEAAARAMGFSLPQIYNNVLLP 162 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 Q PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 163 QAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|292670512|ref|ZP_06603938.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Selenomonas noxia ATCC 43541] gi|292647922|gb|EFF65894.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Selenomonas noxia ATCC 43541] Length = 235 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 114/210 (54%), Gaps = 18/210 (8%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L++ VTL + ++ + + +GF+ AV+R+ + I FYV RGTPL++Q+ Sbjct: 14 LVWQGAGVTLSLTALALIFAAPVGFYFAVLRVR-GYRVGGSIARFYVSFVRGTPLILQIL 72 Query: 76 VIFYG--------LPHIGIVFDSFVAI------IISLTLNFSAYISEIIRSSIISIPKGQ 121 +++ + IG+ + F A+ + T+N A ++E RS++++IPKGQ Sbjct: 73 LLYSLLPSLLNVLVKDIGLEINVFEAVDPFWYAVFIFTINTIALLTEAFRSALLAIPKGQ 132 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A A GL+ QT H+I+PQ + + +++ ++++K TS+A +T+ +I + Sbjct: 133 LEAGLAGGLSELQTYLHVIIPQALVVALPSIANITVNLIKGTSLAFLMTVKDITAVGKVA 192 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 S Y + Y ++ VYL+L C ++Q+ Sbjct: 193 ASYGYNYIEAYLDVFLVYLVL---CTVVQL 219 >gi|312196941|ref|YP_004017002.1| polar amino acid ABC transporter inner membrane protein [Frankia sp. EuI1c] gi|311228277|gb|ADP81132.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EuI1c] Length = 350 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 110/215 (51%), Gaps = 22/215 (10%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +++TL + S V L+ G +A+ R+ S+ ++ + Y+W+FR PL+V L ++ Sbjct: 102 GLLITLQVTAYSAVFGLLGGIVLALGRLS-SNPVLKSVSWLYIWLFRSVPLIVVLIFLYN 160 Query: 80 ----------GLP--------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 G+P H + +I ++LN +AY +E++R+ ++S+ +GQ Sbjct: 161 FGALYRTVSLGVPFGPRFLSFHEADLLGEMAIAVIGVSLNEAAYAAEVVRAGLLSVDQGQ 220 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ A+GL R R I+LPQ + ++ I ++K TS+ +++ +IF Q Sbjct: 221 HEAAAALGLPRFYQFRRIVLPQALRAIIPSYVNQLIGLIKGTSLVFYVSLLDIFGKVQ-T 279 Query: 182 VSTTYQPLIIYCELAFV--YLILTSFCYIIQIKIE 214 + +TY +I L Y+ILTS ++Q +E Sbjct: 280 MGSTYPGDVIPLLLVGTAWYVILTSIVSVVQYYVE 314 >gi|241895819|ref|ZP_04783115.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] gi|241870862|gb|EER74613.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] Length = 217 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 101/180 (56%), Gaps = 2/180 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + ++ + SLI+G A++ + + ++++I Y+ + R PLLV + + FY + Sbjct: 19 TIASSILALIGSLILGTAFALMEVV-PNKLVNIIGRIYIEVVRNIPLLV-ITMFFYVVIA 76 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 I F A LTL SA+I+E +R+ I ++PKGQ + + + GL+ Q +R+I+LPQ Sbjct: 77 NVIKISGFAAGTFGLTLYTSAFIAETVRAGINAVPKGQLEGAMSNGLSWWQGMRYIVLPQ 136 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++FI+++K++SV + + ++ A +I T+ + + YLILT Sbjct: 137 AFKLVIPPLGNQFINLIKNSSVLAFVAGLDLMYQANQISQMTFDTFGPFIIVGIFYLILT 196 >gi|167841038|ref|ZP_02467722.1| histidine transport system permease protein [Burkholderia thailandensis MSMB43] Length = 237 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 17/211 (8%) Query: 5 WFN-LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W N L D + + + +T+ + +S I + +AV R+ + + Y + Sbjct: 9 WRNYLYTDGYR---FTGLAITMWLLVVSIGIGFCLSVPLAVARVSKRKWLAGAVW-LYTY 64 Query: 64 IFRGTPLLVQLFVIFYGL---------PHIGIVF-DSFVAIIISLTLNFSAYISEIIRSS 113 +FRGTPL VQL + + GL P + F D +++ TLN AY +EI + Sbjct: 65 VFRGTPLYVQLLLCYTGLYSLQAVRGTPMLDAFFRDGMNCTLLAFTLNTCAYTTEIFAGA 124 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIP 172 I S G+ +A+ A G++ R I+LP + A+PL S+E I +L +T+VA T T+P Sbjct: 125 IKSTSYGEIEAARAYGMSTFTLYRRIVLPSALR-RALPLYSNEVILMLHATTVAFTATVP 183 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +I + A+ + S TY + A +YL ++ Sbjct: 184 DILKIARDVNSATYMSFHAFGIAALLYLAIS 214 >gi|254248929|ref|ZP_04942249.1| ABC-type arginine/histidine transport system, permease component [Burkholderia cenocepacia PC184] gi|124875430|gb|EAY65420.1| ABC-type arginine/histidine transport system, permease component [Burkholderia cenocepacia PC184] Length = 236 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 14/196 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+S+ +GF +AV I S+ IS + Y ++FRGTPL VQL + + G+ + +V D Sbjct: 31 VVSIALGFALAVPLAIARASSNRWISGPVWLYTYVFRGTPLYVQLLMCYTGIYSLQVVHD 90 Query: 90 ----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + +++ LN AY +EI +I + G+ +A A G++R + I Sbjct: 91 HVLLDTFFRNAMNCTLLAFVLNECAYATEIFAGAIKATSAGEVEAGMAYGMSRFKLHTRI 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILP + S S+E I +L +T++A T T+P+I + + + S TY Y A +Y Sbjct: 151 ILPSALRRSLPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYMSFQAYGIAAVLY 210 Query: 200 LILTSFCYIIQIKIES 215 ++ + + + K+E+ Sbjct: 211 AVVFALIWAFR-KLET 225 >gi|330970979|gb|EGH71045.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Pseudomonas syringae pv. aceris str. M302273PT] Length = 236 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 10/155 (6%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGL---------PHIGIVF-DSFVAIIISLTLNFSAYISE 108 FY ++FRGTPL +QL + + G+ P + F D+ I++ TLN AY +E Sbjct: 60 QFYTYLFRGTPLYIQLLICYTGIYSLAAVREQPMLDAFFRDAMNCTILAFTLNTRAYTTE 119 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I +I S+ G+ +A+ A GLT + ++I+P + S S+E I +L ST+VA T Sbjct: 120 IFAGAIRSMAHGEVEAAKAYGLTGWKLYAYVIMPSVLRRSLPYYSNEVILMLHSTTVAFT 179 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 T+P+I + A+ S T+ + A +YL +T Sbjct: 180 ATVPDILKVARDANSATFMTFQSFGIAAVMYLTVT 214 >gi|261339908|ref|ZP_05967766.1| amino acid ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] gi|288317819|gb|EFC56757.1| amino acid ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] Length = 307 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 67/238 (28%), Positives = 121/238 (50%), Gaps = 22/238 (9%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++EW F ++ + TL + I V+S+ +G +A+ S ++S + Y Sbjct: 40 RWEWAVFARWFFDPVILEGVGQTLLLTLIGTVLSVFLGGMLALA-RLSSSWLLSSLAWAY 98 Query: 62 VWIFRGTPLLVQLFVIFY----------GLPHIGIVFDSFVAI---------IISLTLNF 102 +W+FR PL+V L +++ G+P I++ F I ++ LTL Sbjct: 99 IWLFRSLPLIVVLIILYNFSYLYDTLSLGVPFTDILWGRFETINVLGQFSTAVVGLTLVQ 158 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTR-KQTIRHIILPQTITTSAVPLSSEFISILK 161 SAY +EI+R + + GQ++A+ A+GL ++T+R IILPQ + T +E IS+ K Sbjct: 159 SAYTAEIVRGGFLGVDHGQYEAAAALGLPAWRRTVR-IILPQALRTILPSGFNEIISLAK 217 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ + +PE+F T Q I + T + + + A YL++T+ IQ +E + + Sbjct: 218 GTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAVWYLVITTVLSAIQHVVERGLAR 275 >gi|28377715|ref|NP_784607.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|308179877|ref|YP_003924005.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28270548|emb|CAD63452.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|308045368|gb|ADN97911.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 213 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + I+ V S IIG A+ + S T+ +I Y+ IFR PLLV + +P Sbjct: 19 TLLSSVIALVFSTIIGTMFAIFEVLPSRTM-RIIGRVYIEIFRNIPLLVIAMFFYVIIPM 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 D F A I LT+ S++I+E +R+ I S+ GQ + + A G+T Q + I+LPQ Sbjct: 78 YVAKIDGFTAGTIGLTIYTSSFIAETVRAGIQSVDPGQMEGARANGMTYWQAMSKIVLPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++FI+++K++SV + + ++ A I S + + Y + YLI+T Sbjct: 138 AFKIIIPPLGNQFINLVKNSSVLAFVAGFDLMYQANSIASLSLDTINSYVVVGVFYLIIT 197 >gi|17549154|ref|NP_522494.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum GMI1000] gi|17431405|emb|CAD18084.1| probable amino acid transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 248 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 52/198 (26%), Positives = 105/198 (53%), Gaps = 3/198 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L++ +P I TL ++ + V++ + +A+ R+ + S++ V+ Sbjct: 11 NWLLLLVGQYPNGPLGGIACTLILSVLGIVLAFPLSVLLALARLSPWSALRSVVTAL-VY 69 Query: 64 IFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RG PLL+ + +++ +P IG F ++ +L + Y+SE++R+ I ++PKGQ Sbjct: 70 GVRGVPLLMLILWVYFLVPLFIGRDVSGFTTMLCTLVIYEGVYLSEVVRAGIEALPKGQM 129 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A+G + +R +ILPQ + + ++F+S +K T++ I +PE+ A +I Sbjct: 130 EAARALGHSYLGAMRVVILPQALYNMLPSMLAQFVSTIKETTLGYVINVPELTFAANQIN 189 Query: 183 STTY-QPLIIYCELAFVY 199 + +P I+ LA +Y Sbjct: 190 NALLSKPFQIFFLLAVIY 207 >gi|325520348|gb|EGC99484.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Burkholderia sp. TJI49] Length = 237 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 95/180 (52%), Gaps = 13/180 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-----PHI 84 V+S++ GF +AV I S+ IS + Y ++FRGTPL VQL + + G+ H Sbjct: 31 VVSIVAGFALAVPLAIARASSNRWISGPVWLYTYVFRGTPLYVQLLMCYTGIYSLQVVHN 90 Query: 85 GIVFDSFVAIIISLTL-----NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 ++ D+F ++ TL N +AY +EI +I + G+ +A A G++R + I Sbjct: 91 HVLLDAFFRNAMNCTLLAFVLNEAAYATEIFAGAIKATAAGEIEAGLAYGMSRFKLYTRI 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILP + S S+E I +L +T++A T T+P++ + + + S TY Y A +Y Sbjct: 151 ILPSALRRSLPSYSNEVILMLHATTLAFTATVPDVLKITRDVNSATYMSFQAYGIAAVIY 210 >gi|325964968|ref|YP_004242874.1| amino acid ABC transporter membrane protein, PAAT family [Arthrobacter phenanthrenivorans Sphe3] gi|323471055|gb|ADX74740.1| amino acid ABC transporter membrane protein, PAAT family [Arthrobacter phenanthrenivorans Sphe3] Length = 262 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 115/219 (52%), Gaps = 23/219 (10%) Query: 4 EWFNLIIDSF----------PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI 53 +W N II +F PQLL ++ TL I+ + VI +++G +AV+ I S + Sbjct: 2 DWLNTIIRTFFDFGAMAEVLPQLLAVGLLNTLIISVAATVIGVVLGMVVAVMGISPSKWL 61 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG-IVFDS--FVAIIISLTLNFSAYISEII 110 + Y +FRG P ++ + +I G + +F + II+L+L SAYI EI Sbjct: 62 -RIPARIYTDLFRGLPAILTILLIGQGFARLSQSIFGPSPYPLGIIALSLIASAYIGEIF 120 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS----VA 166 R+ I S+ KGQ +A A+G+T +++ +++PQ I L ++FI+I+K +S + Sbjct: 121 RAGIQSVDKGQGEACRALGMTYGKSMALVVIPQGIRRVLPALVNQFIAIVKDSSLVYFLG 180 Query: 167 STITIPEIFQTAQR--IVSTTYQPLIIYCELAFVYLILT 203 ++ E+F+ Q ++S PL++ YLI+T Sbjct: 181 LLVSERELFRVGQDAAVLSGNLSPLVMA---GVFYLIIT 216 >gi|300767694|ref|ZP_07077604.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494679|gb|EFK29837.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 213 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + I+ V S IIG A+ + S T+ +I Y+ IFR PLLV + +P Sbjct: 19 TLLSSVIALVFSTIIGTMFAIFEVLPSRTM-RIIGRVYIEIFRNIPLLVIAMFFYVIIPM 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 D F A I LT+ S++I+E +R+ I S+ GQ + + A G+T Q + I+LPQ Sbjct: 78 YVAKIDGFTAGTIGLTIYTSSFIAETVRAGIQSVDPGQMEGARANGMTYWQAMSKIVLPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++FI+++K++SV + + ++ A I S + + Y + YLI+T Sbjct: 138 AFKIIIPPLGNQFINLVKNSSVLAFVAGFDLMYQANSIASLSLDTINSYVVVGVFYLIIT 197 >gi|168235756|ref|ZP_02660814.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197290999|gb|EDY30352.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 210 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 98/186 (52%), Gaps = 1/186 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L I TL + F+ + G +AV+R S + I+ V+I RG P+L+ +F+ Sbjct: 8 LLEGIGNTLLVTFTCFLSAFFTGLTVAVLR-RLSPLPLQKILDVLVFILRGIPILIAVFL 66 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GLP IGI VA+ +S+ L +Y++E+ R ++ + + + G+ + Q I Sbjct: 67 VYFGLPSIGIYVSPLVAMNLSVGLISGSYLAEVFRGALKLVEPFEITVAKVAGMRQLQVI 126 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +I LPQ + S + +EF S+LK+T A T+ I EI + A + + T L IY Sbjct: 127 VNIELPQMLRFSVPGIINEFSSVLKATPFAYTVGIAEITKQAMSLTAITLNGLQIYTLAG 186 Query: 197 FVYLIL 202 +Y I+ Sbjct: 187 LLYFII 192 >gi|16764978|ref|NP_460593.1| ABC transporter permease component [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62180199|ref|YP_216616.1| putative amino acid ABC transporter permease component [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|167992810|ref|ZP_02573906.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168819430|ref|ZP_02831430.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|197264740|ref|ZP_03164814.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|224583874|ref|YP_002637672.1| ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|16420160|gb|AAL20552.1| putative amino acid ABC transporter permease component [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62127832|gb|AAX65535.1| putative amino acid ABC transporter permease component [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|197242995|gb|EDY25615.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205329033|gb|EDZ15797.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205343652|gb|EDZ30416.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|224468401|gb|ACN46231.1| putative ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246827|emb|CBG24641.1| putative ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993564|gb|ACY88449.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158162|emb|CBW17659.1| putative ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912622|dbj|BAJ36596.1| putative amino acid ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224257|gb|EFX49320.1| Putative ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322714672|gb|EFZ06243.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129903|gb|ADX17333.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332988521|gb|AEF07504.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 215 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 99/186 (53%), Gaps = 1/186 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L I TL + F+ + + G +AV+R S + I+ V+I RG P+L+ +F+ Sbjct: 13 LLEGIGNTLLVTFTCFLSAFLTGLTVAVLR-RLSPLPLQKILDVLVFILRGIPILIAVFL 71 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GLP IGI VA+ +S+ L +Y++E+ R ++ + + + G+ + Q I Sbjct: 72 VYFGLPSIGIYVSPLVAMNLSVGLISGSYLAEVFRGALKLVEPFEITVAKVAGMRQLQVI 131 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +I LPQ + S + +EF S+LK+T A T+ I EI + A + + T L IY Sbjct: 132 INIELPQMLRFSVPGIINEFSSVLKATPFAYTVGIAEITKQAMSLTAITLNGLQIYTLAG 191 Query: 197 FVYLIL 202 +Y I+ Sbjct: 192 VLYFII 197 >gi|332088978|gb|EGI94090.1| glutamine transport system permease protein glnP domain protein [Shigella boydii 5216-82] Length = 140 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 77/128 (60%) Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 F A ++++ +N AYI+EI R +++SI KG +A A+GL+R +TIR++ILP + Sbjct: 11 FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLP 70 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 PL +++I +K TS+ I + E+ + Q I++ ++ L I+ +A YLI+T I Sbjct: 71 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFIL 130 Query: 211 IKIESSVT 218 ++E + Sbjct: 131 RRLERRMK 138 >gi|271967568|ref|YP_003341764.1| polar amino acid ABC transporter inner membrane protein [Streptosporangium roseum DSM 43021] gi|270510743|gb|ACZ89021.1| polar amino acid ABC transporter, inner membrane subunit [Streptosporangium roseum DSM 43021] Length = 274 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 48/153 (31%), Positives = 86/153 (56%), Gaps = 4/153 (2%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + L YV + R P L+ ++V+ + LP G+ F +++ L ++ +A +EI R+ Sbjct: 98 VRLPAAAYVEVVRTVPALLLVYVVLFALPRYGLDLPLFWKLVVPLAISNAAAFAEIFRAG 157 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I+S+ +GQ +A A+GLT QT+R I+LPQ + S+ + +LK TS+ ++ E Sbjct: 158 ILSVERGQSEAGLAVGLTHGQTMRMIVLPQAARRVLPSIVSQSVGLLKDTSLGFVVSYAE 217 Query: 174 IFQTAQRIVSTTYQPLII--YCELAFVYLILTS 204 + + + V TY L+I Y +A VYL++ + Sbjct: 218 LLYSGK--VLATYNGLLIQTYIVVALVYLVVNA 248 >gi|238911981|ref|ZP_04655818.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 210 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 99/186 (53%), Gaps = 1/186 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L I TL + F+ + + G +AV+R S + I+ V+I RG P+L+ +F+ Sbjct: 8 LLEGIGNTLLVTFTCFLSAFLFGLTVAVLR-RLSPLPLQKILDVLVFILRGIPILIAVFL 66 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GLP IGI VA+ +S+ L +Y++E+ R ++ + + + G+ + Q I Sbjct: 67 VYFGLPSIGIYVSPLVAMNLSVGLISGSYLAEVFRGALKLVEPYEITVAKVAGMRQLQVI 126 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +I LPQ + S + +EF S+LK+T A T+ I EI + A + + T L IY Sbjct: 127 INIELPQMLRFSVPGIINEFSSVLKATPFAYTVGIAEITKQAMSLTAITLNGLQIYTLAG 186 Query: 197 FVYLIL 202 +Y I+ Sbjct: 187 VLYFII 192 >gi|33591319|ref|NP_878963.1| glutamate/aspartate transport system permease protein [Bordetella pertussis Tohama I] gi|33570961|emb|CAE40433.1| glutamate/aspartate transport system permease protein [Bordetella pertussis Tohama I] gi|332380721|gb|AEE65568.1| glutamate/aspartate transport system permease protein [Bordetella pertussis CS] Length = 229 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 107/207 (51%), Gaps = 10/207 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I S L +V TL + +S + L +G +A+ R+ +S + YV Sbjct: 6 FDVIGRSLGYLFRDGMVFTLKLTFLSTAMGLALGTLLAMCRLS-GIKPLSAVAAAYVNGL 64 Query: 66 RGTPLLVQLFVIFYGLPHIG---------IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 R PL++ +F ++ +P+IG + F + +I+ TL +AY EI+R+ I S Sbjct: 65 RALPLILVIFWFYFLVPYIGGWLTGAGRPLQVGGFTSALITFTLFEAAYFCEIMRAGIQS 124 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQ A+YAIGL QT+ +++LPQ + A L ++ I + + TS+ +++ + Sbjct: 125 IPRGQTSAAYAIGLNYWQTMAYVVLPQALRNMAPVLLTQTIVLFQDTSLVYVLSLTDFLG 184 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 + + + +Y +A VY +++ Sbjct: 185 AGINVAQRDNRLVEMYLFVAAVYFVMS 211 >gi|254555900|ref|YP_003062317.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum JDM1] gi|254044827|gb|ACT61620.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum JDM1] Length = 213 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + I+ V S IIG A+ + S T+ +I Y+ IFR PLLV + +P Sbjct: 19 TLLSSVIALVFSTIIGTMFAIFEVLPSRTM-RIIGRVYIEIFRNIPLLVIAMFFYVIIPM 77 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 D F A I LT+ S++I+E +R+ I S+ GQ + + A G+T Q + I+LPQ Sbjct: 78 YVTKIDGFTAGTIGLTIYTSSFIAETVRAGIQSVDPGQMEGARANGMTYWQAMSKIVLPQ 137 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++FI+++K++SV + + ++ A I S + + Y + YLI+T Sbjct: 138 AFKIIIPPLGNQFINLVKNSSVLAFVAGFDLMYQANSIASLSLDTINSYVVVGVFYLIIT 197 >gi|268592304|ref|ZP_06126525.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Providencia rettgeri DSM 1131] gi|291312085|gb|EFE52538.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Providencia rettgeri DSM 1131] Length = 250 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 57/226 (25%), Positives = 121/226 (53%), Gaps = 12/226 (5%) Query: 2 KYEWFNLIIDSFPQ--LLYAAI--VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI 57 + W L+ +FP L AA+ V++L S V+ + G +A++R F+ + + + I Sbjct: 7 EQNWQYLLFGTFPDGPLEGAALTLVISLLAGAASIVLGTLGGIALAMLRGFWVN-LFAAI 65 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + F FR P+++ +F ++ LP +G+ ++ +L L SAY++ +++ I++ Sbjct: 66 LGF----FRAIPVIMLIFWTYFLLPILLGMEIPGIATVVCALALITSAYLAHAVKAGILA 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-F 175 I GQW A ++G +R Q + +++LPQ + +++++++K TS+A + + E+ F Sbjct: 122 IGAGQWQAGLSLGFSRWQVLWNVVLPQALRMMVPSFINQWVALIKDTSLAYVVGVAELSF 181 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT-QH 220 Q PL ++ +AF+Y ++ II ++ + ++ QH Sbjct: 182 LATQVNNREMVYPLEVFLFVAFIYFVMCFAVEIIANRVATKLSAQH 227 >gi|159185731|ref|NP_357188.2| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium tumefaciens str. C58] gi|159140865|gb|AAK89973.2| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium tumefaciens str. C58] Length = 603 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 108/202 (53%), Gaps = 26/202 (12%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF----------VIFYGLPHI 84 ++G +A+ R+ S +++ + Y+WIFR PL+V L + G+P+ Sbjct: 98 GFVLGTLLALARVSRSPLLVA-VSWTYIWIFRSIPLIVLLLILNNLGYLYETVTIGVPYT 156 Query: 85 GIVFDS---------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 GI F S F A I+ LTLN +A+ SEI+R I+S+ +GQ +A+ A+GL R++ Sbjct: 157 GINFISWNTTQLMTPFAAAILGLTLNQAAFASEIVRGGILSVDQGQLEAAAALGLPRRRQ 216 Query: 136 IRHIILPQTITTSAVPLS-SEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIY 192 IILPQ + S +P + ++ I + K TS + +PE+F T Q I + PL++ Sbjct: 217 ASRIILPQAM-RSILPTAFNDIIGLAKGTSQVYILALPELFYTIQIIYRRNLEVIPLLMV 275 Query: 193 CELAFVYLILTSFCYIIQIKIE 214 + YL++ + I+Q IE Sbjct: 276 ATV--WYLVILTALSIVQHHIE 295 >gi|66047103|ref|YP_236944.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63257810|gb|AAY38906.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] Length = 236 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 10/155 (6%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGL---------PHIGIVF-DSFVAIIISLTLNFSAYISE 108 FY ++FRGTPL +QL + + G+ P + F D+ I++ TLN AY +E Sbjct: 60 QFYTYLFRGTPLYIQLLICYTGIYSLAAVREQPMLDAFFRDAMNCTILAFTLNTCAYTTE 119 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I +I S+ G+ +A+ A GLT + ++I+P + S S+E I +L ST+VA T Sbjct: 120 IFAGAIRSMAHGEVEAAKAYGLTGWKLYAYVIMPSVLRRSLPYYSNEVILMLHSTTVAFT 179 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 T+P+I + A+ S T+ + A +YL +T Sbjct: 180 ATVPDILKVARDANSATFMTFQSFGIAAVMYLTVT 214 >gi|242239985|ref|YP_002988166.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242132042|gb|ACS86344.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 229 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 12/225 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + +L+ +TL +A S V++L+IG A ++ S ++S Y + RG P L Sbjct: 4 GYSELIMDGARMTLQLAICSLVLALVIGLVGAAAKLS-SSRLLSGCFSAYTTLIRGVPDL 62 Query: 72 VQLFVIFYGLPHI-----------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V + +IFYGL + I D VA II+L + AY +E R + +++P+G Sbjct: 63 VLMLLIFYGLQMVLNSLTDTLGMEQIDIDPLVAGIITLGFIYGAYFTETFRGAYLAVPRG 122 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A G + + R I+ P + + + + + ILK+T++ S + + ++ + Q Sbjct: 123 QIEAAVAFGFSPMKVFRRIMFPSMMRFALPGIGNNWQVILKATALVSLLGLSDVIKATQL 182 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + P +YLI T+ + +E + V+ Sbjct: 183 AGKGAHHPFFFAIVAGALYLIFTTLSNGVLWWLEKRYSAGVRKVN 227 >gi|171058820|ref|YP_001791169.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix cholodnii SP-6] gi|170776265|gb|ACB34404.1| polar amino acid ABC transporter, inner membrane subunit [Leptothrix cholodnii SP-6] Length = 343 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 112/227 (49%), Gaps = 50/227 (22%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 ID + + ++ TL +A I V+ ++G + V R + + ++ + + YV +FR P Sbjct: 83 IDPYWRAFLVGLLNTLRVALIGIVLITLLGTALGVGR-YSRNALVRGLCYGYVELFRNVP 141 Query: 70 LLVQLFVIF-----------------------------------------YGLPHIGI-- 86 +LVQL + + + +P G Sbjct: 142 ILVQLLIWYLLMVEFLPEAMAPLDWGGRVFLSKSGLSLPWLAHSAEAGWSWSIPEPGAFV 201 Query: 87 ------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 + F+++++ LT S++++E++R+ I S+P+GQ +A+++IGL+R +T+R ++ Sbjct: 202 LEGGVTLSPEFLSVLLGLTFYTSSFVAEVVRAGIASVPRGQTEAAHSIGLSRAKTLRLVV 261 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 LPQ + PL+++++++ K++S+A I P++ A ++ T + Sbjct: 262 LPQALRVIIPPLTNQYLNLTKNSSLAVVIGYPDVVSIANTALNQTGR 308 >gi|28871280|ref|NP_793899.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|213970885|ref|ZP_03399008.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301383765|ref|ZP_07232183.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302133659|ref|ZP_07259649.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28854530|gb|AAO57594.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213924408|gb|EEB57980.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|331015688|gb|EGH95744.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 236 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 10/155 (6%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGL---------PHIGIVF-DSFVAIIISLTLNFSAYISE 108 FY ++FRGTPL +QL + + G+ P + F D+ I++ TLN AY +E Sbjct: 60 QFYTYLFRGTPLYIQLLICYTGIYSIAAVREQPMLDAFFRDAMNCTILAFTLNTCAYTTE 119 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I +I S+ G+ +A+ A GLT + ++I+P + S S+E I +L ST+VA T Sbjct: 120 IFAGAIRSMAHGEVEAAKAYGLTGWKLYAYVIMPSVLRRSLPYYSNEVILMLHSTTVAFT 179 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 T+P+I + A+ S T+ + A +YL +T Sbjct: 180 ATVPDILKVARDANSATFMTFQSFGIAAVMYLTVT 214 >gi|16760253|ref|NP_455870.1| ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141979|ref|NP_805321.1| ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213426273|ref|ZP_03359023.1| putative ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|289804863|ref|ZP_06535492.1| putative ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|25296630|pir||AH0665 probable ABC amino acid transporter permease STY1437 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502548|emb|CAD01697.1| putative ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Typhi] gi|29137608|gb|AAO69170.1| putative ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 215 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 99/186 (53%), Gaps = 1/186 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L I TL + F+ + + G +AV+R S + I+ V+I RG P+L+ +F+ Sbjct: 13 LLEGIGNTLLVTFTCFLSAFLTGLTVAVLR-RLSPLPLQKILDVLVFILRGIPILIAVFL 71 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GLP IGI VA+ +S+ L +Y++E+ R ++ + + + G+ + Q I Sbjct: 72 VYFGLPSIGIYVSPLVAMNLSVGLISGSYLAEVFRGALKLVEPFEITVAKVAGMRQLQVI 131 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +I LPQ + S + +EF S+LK+T A T+ I EI + A + + T L IY Sbjct: 132 INIELPQMLRFSVPGIINEFSSVLKATPFAYTVGIAEITKQAMSLTAITLNGLQIYTLAG 191 Query: 197 FVYLIL 202 +Y I+ Sbjct: 192 VLYFII 197 >gi|319957436|ref|YP_004168699.1| amino acid ABC transporter membrane protein 2, paat family [Nitratifractor salsuginis DSM 16511] gi|319419840|gb|ADV46950.1| amino acid ABC transporter membrane protein 2, PAAT family [Nitratifractor salsuginis DSM 16511] Length = 362 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 9/212 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + +++TL IA + V+S IG +A+ R I SL + FY+ RG PL+ LF+ Sbjct: 153 WGGLLLTLVIASVGIVLSFPIGILLALGRQSKLPIIKSLSV-FYIEFVRGVPLITVLFMA 211 Query: 78 FYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 LP G+ F+ +I +TL +AY++E IRS +IPKGQ++A+ A+GL Q Sbjct: 212 SVVLPLFFPEGVNFNKLARALIGITLFEAAYVAENIRSGFQAIPKGQYEAADALGLGYWQ 271 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + +ILPQ I + L FIS+ K TS+ I + ++ + + L + E Sbjct: 272 KMALVILPQAIKVTIPNLVGTFISLFKDTSLVMIIGLFDLLAMVN-VTANDRDWLGMDTE 330 Query: 195 ----LAFVYLILTSFCYIIQIKIESSVTQHTY 222 +AFV+ I T + ++E + + + Sbjct: 331 GYVFVAFVFWIFTFSMSMYSKRLEKKLDTNKH 362 >gi|307709001|ref|ZP_07645461.1| L-cystine transport system permease protein tcyB [Streptococcus mitis SK564] gi|307620337|gb|EFN99453.1| L-cystine transport system permease protein tcyB [Streptococcus mitis SK564] Length = 266 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 112/223 (50%), Gaps = 28/223 (12%) Query: 9 IIDSFP---QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + D P Q L I++T+ A V++L+ + + R+ I+ + F+V Sbjct: 30 VFDGIPRIVQQLPTTIMLTIGGALFGLVLALLFAI-VKINRV----KILYPLQAFFVSFL 84 Query: 66 RGTPLLVQLFVIFYGLP--------HIGIVFD-----SFVAIIISLTLNFSAYISEIIRS 112 +GTP+LVQL + +YG+P G F+ + V I++ N +AY SE IR+ Sbjct: 85 KGTPILVQLMLTYYGIPLALKALNQQWGTGFNINAIPAAVFAIVAFAFNEAAYASETIRA 144 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I+S+ G+ +A+ ++G+TR Q R +I+P + L + I + K TS+A + + Sbjct: 145 AILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKGTSLAFSAGVV 204 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 E+F AQ + Y+ + +A VY +++ I IES Sbjct: 205 EVFAQAQILGGADYRYFERFISVALVY-------WVVNIGIES 240 >gi|302060016|ref|ZP_07251557.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] Length = 231 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 11/170 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIG-------IVFDSFVAIIISLTLNFSAYISEI 109 Y + RG P L+ + +I++G + +G + +F A +I+L L F AY +E+ Sbjct: 55 YSTLVRGIPELLWVLLIYFGTVNGMRALGEWLGIPNLALSAFAAGVIALGLCFGAYATEV 114 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R I++IPKG +A A+G++R + + ++LPQ + L + F+ ++K T++ S I Sbjct: 115 FRGEILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNLFMILMKDTALVSVI 174 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + EI + AQ V T + Y A +YL LT I +E + Sbjct: 175 GLEEIMRHAQIAVGFTKEAFTFYMVAAIMYLGLTVLAMIGMYFLEKHAGR 224 >gi|227509838|ref|ZP_03939887.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227512775|ref|ZP_03942824.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227522899|ref|ZP_03952948.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] gi|227083975|gb|EEI19287.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227089928|gb|EEI25240.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] gi|227190762|gb|EEI70829.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 212 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/153 (31%), Positives = 84/153 (54%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEII 110 + ++ Y+ +FR PLLV + +P + F + + LTL SA+I+E + Sbjct: 45 NKFARVVARVYIEVFRNIPLLVITMFFYVVIPMYIVKISGFASGTVGLTLYSSAFIAETV 104 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 RS I S+ GQ + + + GL+ Q++R+IILPQ PL ++FI+++K++SV + + Sbjct: 105 RSGIQSVDPGQMEGARSTGLSYWQSMRYIILPQAFRYVIPPLGNQFINLVKNSSVLAFVA 164 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ A I S + Q + Y + +YLILT Sbjct: 165 GFDLMYQANVIASDSLQSMSTYMCVGVLYLILT 197 >gi|222082422|ref|YP_002541787.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727101|gb|ACM30190.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 592 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 70/233 (30%), Positives = 117/233 (50%), Gaps = 32/233 (13%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EWF F + + + TL + ++ + I+G +A+ R+ S ++S + Y+W Sbjct: 67 EWF------FAEPVLVGLGRTLLLTVLAAISGSILGTALALARVSKS-PLLSGLSWGYIW 119 Query: 64 IFRGTPLLVQLF----------VIFYGLPHIGIVF---------DSFVAIIISLTLNFSA 104 + R P++V L I G+P VF F A + LTLN SA Sbjct: 120 LLRSIPMIVLLLVLNNLGYLYETIKIGIPFTDTVFIDYPTVQLLTPFAAAFLGLTLNQSA 179 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS-SEFISILKST 163 + +EI+R I+S+ +GQ +A+ A+GL+R++ I+LPQ + S +P +E I + KST Sbjct: 180 FFAEIVRGGILSVDQGQLEAASALGLSRRRQAFRIVLPQAM-RSILPTGFNEIIGLAKST 238 Query: 164 SVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 S+ + +PE+F T Q I + PL++ + YLI+ + I Q IE Sbjct: 239 SMVYVLALPELFYTVQVIYRRNLEVIPLLMVATV--WYLIIMTVLSIAQYYIE 289 >gi|149191356|ref|ZP_01869609.1| ABC-type amino acid transport system, permease component [Vibrio shilonii AK1] gi|148834835|gb|EDL51819.1| ABC-type amino acid transport system, permease component [Vibrio shilonii AK1] Length = 365 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 104/194 (53%), Gaps = 6/194 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + ++VTL IA + ++SL IG +A+ R II I Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIIVSLPIGVALALGRRS-EMPIIRSICTVYIEVWRGVPLITVLFMA 213 Query: 78 FYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 LP G+ D + +I + + +AY++E+IR + +IPKGQ++A+ A+GLT + Sbjct: 214 SVMLPLFFSEGVETDKLIRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLTYWK 273 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + I+LPQ + + + + FI + K TS+ I + ++ Q +T + L E Sbjct: 274 KMGLIVLPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQ-AANTDPEWLGFATE 332 Query: 195 -LAFVYLILTSFCY 207 FV L+ FC+ Sbjct: 333 SYVFVALVFWVFCF 346 >gi|39939074|ref|NP_950840.1| ABC-type amino acid transport system, permease component [Onion yellows phytoplasma OY-M] gi|39722183|dbj|BAD04673.1| ABC-type amino acid transport system, permease [Onion yellows phytoplasma OY-M] Length = 576 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 75/129 (58%), Gaps = 7/129 (5%) Query: 47 IFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS------FVAIIISLTL 100 I++ I I+ FY+WI + TP+LVQ FV ++ L ++ F A ++ + L Sbjct: 399 IYYLHQIGCRIIDFYIWIIKSTPMLVQAFVSYFFLKEFAFFQNATWYTPMFAAYMV-IIL 457 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N YISEII +I + KGQ +AS ++G+T QT+R+I+LPQ I S P+ +EFI L Sbjct: 458 NTMGYISEIITKNISFLDKGQIEASLSLGMTHTQTMRYIVLPQAIKRSQTPILNEFIINL 517 Query: 161 KSTSVASTI 169 K V S + Sbjct: 518 KDCVVFSML 526 >gi|188533380|ref|YP_001907177.1| Putative ABC transporter, permease [Erwinia tasmaniensis Et1/99] gi|188028422|emb|CAO96283.1| Putative ABC transporter, permease [Erwinia tasmaniensis Et1/99] Length = 299 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 106/208 (50%), Gaps = 20/208 (9%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY----------GLP 82 V+S+ +G +A+ R+ S ++S + Y+W+FR PL+V L +++ G+P Sbjct: 71 VLSIFLGVLLALARLSPS-WLLSGLAFSYIWLFRSLPLIVVLIILYNFSYLYDRLSLGIP 129 Query: 83 HIGIVFDSFVAI---------IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 + SF I + LTL +AY +EI+R I + GQ++A+ A+GL Sbjct: 130 FTPLTLASFKTIDVLGQFSTAVTGLTLVQAAYTAEIVRGGITGVDHGQFEAAAALGLPSS 189 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + IILPQ + +E IS+ K T++ + +PE+F T Q + + T Q + + Sbjct: 190 RRTLRIILPQALRAIIPSGFNEIISLAKGTAMVYVLAMPELFYTIQMVYNRTQQVIPLLM 249 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQHT 221 A YL++T+ ++Q +E + + + Sbjct: 250 VAAVWYLLITTLLSVVQHYVERRLARSS 277 >gi|325696133|gb|EGD38024.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK160] gi|332358687|gb|EGJ36510.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK355] Length = 219 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 109/196 (55%), Gaps = 15/196 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I+ IS V+S I G +AV+R + ++ LI Y+ R P L+ +F IF Sbjct: 22 LTLQISFISIVLSTIFGTILAVMR-NGKNKLLKLIASIYIEFVRNVPNLLWIFTIF---- 76 Query: 83 HIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 +VF S A IIS T+ SA ++EIIR + +I GQ +A + G T+ Q +R+II Sbjct: 77 ---LVFQIKSTPAGIISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRYII 133 Query: 141 LPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 LPQ I + S+F++++K TS+ S I + E+F +AQ ++ ++ ++ +Y Sbjct: 134 LPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFA----LY 189 Query: 200 LILTSFCYIIQIKIES 215 L++ + ++I I S Sbjct: 190 LLVAAIYFLINFAISS 205 >gi|307708311|ref|ZP_07644778.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus mitis NCTC 12261] gi|307615757|gb|EFN94963.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus mitis NCTC 12261] Length = 219 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 105/192 (54%), Gaps = 11/192 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +TL I+ I+ V+S +IG +AV+R + I+ +I Y+ R P L+ +F Sbjct: 16 IFKGFCLTLYISLIAIVLSTLIGTVLAVMR-NGKNPILRIISSIYIEFVRNVPNLLWIFT 74 Query: 77 IFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF +VF S A I + TL SA ++EIIR + ++ KGQ++A + G T Q Sbjct: 75 IF-------LVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQ 127 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYC 193 + HIILPQ I + S+F++++K TS+ S I + E+F +Q ++ ++P ++ Sbjct: 128 ILYHIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFEPEQVFS 187 Query: 194 ELAFVYLILTSF 205 + LI SF Sbjct: 188 LYILIALIYFSF 199 >gi|206576764|ref|YP_002238287.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288935273|ref|YP_003439332.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|290509327|ref|ZP_06548698.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55] gi|206565822|gb|ACI07598.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288889982|gb|ADC58300.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] gi|289778721|gb|EFD86718.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55] Length = 308 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 19/178 (10%) Query: 61 YVWIFRGTPLLVQLFVIFY----------GLPHIGIVFDSFVAI---------IISLTLN 101 Y+W+FR PL+V L +++ G+P G+ + S+ I ++ LTL Sbjct: 98 YIWLFRSLPLIVVLIILYNFSYLYDTLSLGIPFTGVTWASYQTINVLGQFSTAVVGLTLV 157 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 SAY +EIIR + + GQ++A+ A+GL + IILPQ + T +E IS+ K Sbjct: 158 QSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTILPSGFNEIISLAK 217 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ + +PE+F T Q I + T + + + A YL +TS IQ +E ++ + Sbjct: 218 GTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAAWYLAITSVLSAIQYLVERALAR 275 >gi|4099021|gb|AAD00523.1| amino acid permease [Helicobacter pylori] Length = 217 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 106/201 (52%), Gaps = 5/201 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + + S P + + +TL I+ ++SL++GF A++ ++F IS I++ Sbjct: 1 MALDW-DFMFHSIPAF-FKGLELTLYISFFGILLSLLVGFLCAIV-LYFKTRFISPIVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+Q+F ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQIFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QRESALSLGFSPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQPLIIYCELAFVYLI 201 + Y+ L+ YLI Sbjct: 176 FIGIYYKTTESLLMLSLTYLI 196 >gi|330811273|ref|YP_004355735.1| ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379381|gb|AEA70731.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 229 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/215 (24%), Positives = 105/215 (48%), Gaps = 13/215 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 +TL +A S +++++G +R+ ++ + Y + RG P LV + +IFYG Sbjct: 15 LTLELALSSMALAIVLGLIGVALRLS-PVRWLAWLGDLYATVIRGIPDLVLILLIFYGGQ 73 Query: 81 ------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P +G I + A I +L F AY+SE R + ++IPKGQ +A A G+ Sbjct: 74 DLLNRVAPMLGYDDYIDLNPLAAGIGTLGFIFGAYLSETFRGAFMAIPKGQAEAGMAYGM 133 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 Q +++PQ I + ++ ++ + K+T++ S + + ++ A++ T +P Sbjct: 134 NGFQVFFRVLVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATREPFT 193 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + +A +YL++TS + +E + + D Sbjct: 194 FFLAVAAMYLVITSVSLLALRHLEKRYSVGVRAAD 228 >gi|304414486|ref|ZP_07395706.1| putative polar amino acid ABC transporter permease [Candidatus Regiella insecticola LSR1] gi|304283204|gb|EFL91606.1| putative polar amino acid ABC transporter permease [Candidatus Regiella insecticola LSR1] Length = 245 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 102/191 (53%), Gaps = 23/191 (12%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ ++TL ++ + VI+ ++GF +A R + +M Y +FR TPLL+QLF Sbjct: 19 LWDGFLLTLWLSSCTSVIATLLGFLLATARDSHLRALQWPVM-LYSALFRNTPLLIQLFF 77 Query: 77 IFYGLPHI------------------GIVFD----SFVAIIISLTLNFSAYISEIIRSSI 114 ++ + I GI F++ + L L +A+I+E +R+ I Sbjct: 78 WYFAVSKILPVSWMQWLNISHQAVFLGITLSWPSFEFLSGLTGLILYSAAFIAEELRAGI 137 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 + GQ A++A+GLT Q++R++ILPQ + S PL ++++I+K++S+ I + E+ Sbjct: 138 NGVASGQKYAAHALGLTNWQSMRYVILPQALKISMPPLLGQYMNIIKNSSLTMAIGVAEL 197 Query: 175 FQTAQRIVSTT 185 ++++ + T Sbjct: 198 SYASRQVETET 208 >gi|303246865|ref|ZP_07333142.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] gi|302491882|gb|EFL51762.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] Length = 231 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 106/200 (53%), Gaps = 4/200 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +I +P+ + +T+ +A + +G ++RI ++ Y+ I RG Sbjct: 14 LIGGYPRGPLGGLAMTVLLAVGGIFGAFWLGLGCGLLRIS-KKPLLRWPALIYIEIIRGI 72 Query: 69 PLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PLL+ +F ++ P + G + +I+L + SAYI+EI+R+ + ++PKGQ +A+ Sbjct: 73 PLLMVVFWFYFLAPVLFGHTLPEAQSALIALIVFTSAYIAEIVRAGVQALPKGQMEAARG 132 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY- 186 GL+ Q + H+ILPQ + ++F+S+ K TS+A I + E+ + A ++ + T Sbjct: 133 TGLSHFQAMTHVILPQALFNMIPSFVNQFVSLTKDTSLAFIIGVNELTKAATQVNNRTLT 192 Query: 187 QPLIIYCELAFVYLILTSFC 206 P I+ +A +Y ++ FC Sbjct: 193 APTEIFITIALLYFVI-CFC 211 >gi|260221298|emb|CBA29723.1| Histidine transport system permease protein hisQ [Curvibacter putative symbiont of Hydra magnipapillata] Length = 228 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/212 (24%), Positives = 112/212 (52%), Gaps = 13/212 (6%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG- 80 V+T+ ++ + ++S+++G A ++ +++L Y + RG P LV + ++FYG Sbjct: 13 VLTIGVSLCALLVSIVLGLLGAAAKLSGRPVLVALSTT-YTTVIRGVPDLVVMLLVFYGG 71 Query: 81 ---LPHI--------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 L H+ + + F+A ++++ + AY++E R +I+SIPKGQ +A++A G Sbjct: 72 TIGLNHLLELSGSKKTVDINPFLAGVLTIGFIYGAYMTETFRGAILSIPKGQMEAAWAFG 131 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 + R + I PQ + + ++ ++ ++KST++ S I + E+ +++ + T P Sbjct: 132 MGRIRAFMRITAPQMVRYALPGFTNNWLVLIKSTALVSLIGLKEMTYLSKQASAATRSPF 191 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 + A ++LI TS + K+ + + T Sbjct: 192 EFFLFSAALFLIYTSVSLFVLRKVNARYSLGT 223 >gi|170703753|ref|ZP_02894468.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170131336|gb|EDS99948.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 237 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 17/211 (8%) Query: 5 WFN-LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W N L D F + +TL + +S + + +AV R+ +S + Y + Sbjct: 9 WRNYLYTDGFR---ITGVAITLWLLVVSIGLGFCLSVPLAVARVS-KRKWLSRAVWLYTY 64 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSS 113 +FRGTPL VQL + + GL + V DSF +++ TLN AY +EI + Sbjct: 65 VFRGTPLYVQLLLCYTGLYSLQFVRGTPLLDSFFRDGMRCTLLAFTLNTCAYTTEIFAGA 124 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIP 172 I + G+ +A+ A G++ R +ILP + A+PL S+E I +L +T+VA T T+P Sbjct: 125 IKATSYGEIEAARAYGMSTFTMYRRVILPSALR-RALPLYSNEVILMLHATTVAFTATVP 183 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +I + A+ + S TY + A +YL+++ Sbjct: 184 DILKIARDVNSATYMSFHAFGIAALLYLVIS 214 >gi|197250092|ref|YP_002146398.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197213795|gb|ACH51192.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 215 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 98/186 (52%), Gaps = 1/186 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L I TL + F+ + G +AV+R F + I+ V+I RG P+L+ +F+ Sbjct: 13 LLEGIGNTLLVTFTCFLSAFFTGLTVAVLRRLFPLPL-QKILDVLVFILRGIPILIAVFL 71 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GLP IGI VA+ +S+ L +Y++E+ R ++ + + + G+ + Q I Sbjct: 72 VYFGLPAIGIYVSPLVAMNLSVGLISGSYLAEVFRGALKLVEPFEITVAKVAGMRQLQVI 131 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +I LPQ + S + +EF S+LK+T A T+ I EI + A + + T L IY Sbjct: 132 VNIELPQMLRFSVPGIINEFSSVLKATPFAYTVGIAEITKQAMSLTAITLNGLQIYTLAG 191 Query: 197 FVYLIL 202 +Y I+ Sbjct: 192 VLYFII 197 >gi|76801537|ref|YP_326545.1| glutamine/glutamate/polar amino acids ABC transporter permease [Natronomonas pharaonis DSM 2160] gi|76557402|emb|CAI48979.1| ABC-type transport system permease protein II 1 (probable substrates glutamine/glutamate/polar amino acids) [Natronomonas pharaonis DSM 2160] Length = 262 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/192 (26%), Positives = 95/192 (49%), Gaps = 24/192 (12%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP------------ 82 + GF I ++ + S + V + RGTP++V + + F+GLP Sbjct: 51 GFLAGFPAGAIEVYGRGPLRSAVRTVGV-LLRGTPIVVLMVLFFFGLPLPDPGDITFSSI 109 Query: 83 --------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 + F++F A +++L L +AY S++ R +I SI +GQ A+ ++GL++ + Sbjct: 110 TLGNTTIPEFSVGFEAFFAAMLALGLRSAAYQSQVFRGAIQSIDEGQVAAARSVGLSKYE 169 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP---LII 191 IRH+++PQ + S +EF +LK TS+A I + E+ + + Q L + Sbjct: 170 AIRHVVVPQALRRSVPGFQNEFTIVLKDTSIAFAIGLAELLTRGYDLFTQPGQSTAVLEV 229 Query: 192 YCELAFVYLILT 203 ++ +Y +LT Sbjct: 230 ILAVSLIYFVLT 241 >gi|47097702|ref|ZP_00235210.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria monocytogenes str. 1/2a F6854] gi|47013921|gb|EAL04946.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria monocytogenes str. 1/2a F6854] Length = 136 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 74/115 (64%) Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 +FV+ I+L+LN +AY++EIIR+ I ++ KGQ +A+ ++G+T+ ++R+IILPQ + Sbjct: 4 SAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNI 63 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 L +EF++++K +S+ S I + E+ + +++P I + +Y +LT Sbjct: 64 LPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLT 118 >gi|307133278|ref|YP_003885294.1| ABC transporter permease [Dickeya dadantii 3937] gi|306530807|gb|ADN00738.1| ABC transport system, permease component [Dickeya dadantii 3937] Length = 252 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/213 (23%), Positives = 113/213 (53%), Gaps = 12/213 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYVWI 64 L+ +FP +TL ++ ++ + S ++G + V + + ++++++ F Sbjct: 13 LMWGTFPDGPLGGAALTLALSLMAGIASAVLGTGLGVALAMYRGWAGGLLAMVLGF---- 68 Query: 65 FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FR P+++ +F ++ LP + G+ ++ +L SAY++ +++ I++I +GQW Sbjct: 69 FRAIPVIMLIFWTYFLLPMLFGVDIPEITTVVCALAFIASAYLAHGVKAGIVAIGRGQWQ 128 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIV 182 A ++GL R QT+ +I+LPQ + +++IS++K TS+A + + E+ F Q Sbjct: 129 AGMSLGLGRWQTLWYIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQVNN 188 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + P ++ +A VY I FC ++ + ++ Sbjct: 189 RSMVYPTEVFLFVALVYFI---FCLLLDLLVQG 218 >gi|298717428|ref|YP_003730070.1| ABC transport system permease [Pantoea vagans C9-1] gi|298361617|gb|ADI78398.1| Putative ABC transport system, permease protein [Pantoea vagans C9-1] Length = 308 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 22/185 (11%) Query: 61 YVWIFRGTPLLVQLFVIFY----------GLPHIGI---------VFDSFVAIIISLTLN 101 Y+W+FR PL+V L +++ G+P G+ V F A +I LTL Sbjct: 98 YIWLFRSLPLIVVLIILYNFSYLYDTLSIGIPFTGLSWGAFQTINVLGQFPAAVIGLTLV 157 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 +AY +EIIR I+ + GQ +A+ A+GL+ + IILPQ + +E IS+ K Sbjct: 158 QAAYSAEIIRGGILGVDHGQVEAASALGLSASRRTFRIILPQALRAIIPTAFNEIISLAK 217 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 TS+ + +PE+F T Q I + + + + A YLI+T+ +IQ +E + + Sbjct: 218 GTSMVYVLAMPELFYTIQMIYNRNQEVIPLLMVGAAWYLIITTVLSVIQYYVERWLAR-- 275 Query: 222 YSVDK 226 SV++ Sbjct: 276 -SVNR 279 >gi|256380966|ref|YP_003104626.1| polar amino acid ABC transporter, inner membrane subunit [Actinosynnema mirum DSM 43827] gi|255925269|gb|ACU40780.1| polar amino acid ABC transporter, inner membrane subunit [Actinosynnema mirum DSM 43827] Length = 278 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 108/200 (54%), Gaps = 11/200 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 + FP+++ A+V T+ + F + L+ G +A++++ S I Y+ FRG P Sbjct: 48 EMFPEVITTALVNTVVYTALGFAVGLVAGLVLALMKLS-SVGPYRWIATIYIEFFRGVPA 106 Query: 71 LVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 L+ + +P G+ FD + I+L + +AYI+E IR+ I ++PKGQ +A+ ++G Sbjct: 107 LLVFVALSVAVPLAFGLKFDIYSTAAIALGVVGAAYIAETIRAGIKAVPKGQLEAARSLG 166 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI----TIPEIFQTAQRIVST- 184 +++ +T +++PQ PL++E I + K +S+ S I T E+ + + ++S Sbjct: 167 MSQGRTTVTVVIPQAFRIILPPLTNELIMLTKDSSLISIIGLIATQRELTKYGREVLSQS 226 Query: 185 -TYQPLIIYCELAFVYLILT 203 T PL+I YLI+T Sbjct: 227 PTVTPLLIA---GLCYLIIT 243 >gi|213160970|ref|ZP_03346680.1| putative ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213418473|ref|ZP_03351539.1| putative ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213581181|ref|ZP_03363007.1| putative ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213611269|ref|ZP_03370095.1| putative ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213650139|ref|ZP_03380192.1| putative ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855808|ref|ZP_03384048.1| putative ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 210 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 99/186 (53%), Gaps = 1/186 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L I TL + F+ + + G +AV+R S + I+ V+I RG P+L+ +F+ Sbjct: 8 LLEGIGNTLLVTFTCFLSAFLTGLTVAVLR-RLSPLPLQKILDVLVFILRGIPILIAVFL 66 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GLP IGI VA+ +S+ L +Y++E+ R ++ + + + G+ + Q I Sbjct: 67 VYFGLPSIGIYVSPLVAMNLSVGLISGSYLAEVFRGALKLVEPFEITVAKVAGMRQLQVI 126 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +I LPQ + S + +EF S+LK+T A T+ I EI + A + + T L IY Sbjct: 127 INIELPQMLRFSVPGIINEFSSVLKATPFAYTVGIAEITKQAMSLTAITLNGLQIYTLAG 186 Query: 197 FVYLIL 202 +Y I+ Sbjct: 187 VLYFII 192 >gi|15891574|ref|NP_357246.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15160006|gb|AAK90031.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 260 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 14/157 (8%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV------AIIISLTLNFSAYISEIIRSSI 114 YV IFR P LV +F Y P + F +++ ++ L + SA+I+EI R +I Sbjct: 92 YVQIFRNAPHLVLIFAATYIFPFEIVAFGNYIPFPDWIKAVVGLAIPASAHIAEITRGAI 151 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 SIP QW+A+ +G +R QT+R IILPQ + S P + + SI T++AS + + E+ Sbjct: 152 QSIPTAQWEAAQGLGFSRNQTLRWIILPQCVKRSLPPWMNLYSSITMGTALASLVGVHEL 211 Query: 175 FQTAQRIVSTTYQ----PLIIYCELAFVYLILTSFCY 207 A ST Q +++Y + + + FCY Sbjct: 212 LHAATD-ASTAVQRNDFTVVVYLTVLMAFFL---FCY 244 >gi|251791766|ref|YP_003006487.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247540387|gb|ACT09008.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 252 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 106/188 (56%), Gaps = 10/188 (5%) Query: 21 IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG 80 +V++L S V+ ++G +A++R ++ +++L++ F FR P+++ +F ++ Sbjct: 30 LVLSLMAGLTSAVLGTVLGVALAMLR-GWAGGLLALVLGF----FRAIPVIMLIFWTYFL 84 Query: 81 LPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 LP + G+ ++ +L L SAY++ +++ I++I +GQW A ++GL R QT+ +I Sbjct: 85 LPMVFGVDIPEITTVVCALALIASAYLAHGVKAGIVAIGRGQWQAGMSLGLGRWQTLWYI 144 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVSTTYQPLIIYCELAFV 198 +LPQ + +++IS++K TS+A + + E+ F Q + P ++ +A V Sbjct: 145 VLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQVNNRSMVYPTEVFLFIALV 204 Query: 199 YLILTSFC 206 Y I FC Sbjct: 205 YFI---FC 209 >gi|157368267|ref|YP_001476256.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157320031|gb|ABV39128.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 237 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 107/206 (51%), Gaps = 27/206 (13%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W L+ + L+ ++TL ++ + + + ++GF + +R D+ + + Sbjct: 1 MNLDW--LLAPEYLSWLWRGFLLTLWLSACASLAATLLGFLLTAMR----DSRLRALRWL 54 Query: 61 ---YVWIFRGTPLLVQLFVIFYG----LPHIGIVFDS--------------FVAIIISLT 99 Y +FR TPLLVQLF ++ LP + + + F+A LT Sbjct: 55 AVGYSSLFRNTPLLVQLFFWYFAAGQILPSAAMQWLNTSHQIGPLEWPSFEFLAGFFGLT 114 Query: 100 LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISI 159 L SA+I+E IRS I + GQ A+ A+GLT Q +R+++LPQ + + PL +++++ Sbjct: 115 LYSSAFIAEEIRSGIRGVAGGQKYAANALGLTGWQAMRYVVLPQALKIAMPPLLGQYMNV 174 Query: 160 LKSTSVASTITIPEIFQTAQRIVSTT 185 +K++S+ I + E+ ++++ + T Sbjct: 175 IKNSSLTMAIGVAELSYASRQVETET 200 >gi|330877313|gb|EGH11462.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330966544|gb|EGH66804.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Pseudomonas syringae pv. actinidiae str. M302091] Length = 236 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 10/155 (6%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGL---------PHIGIVF-DSFVAIIISLTLNFSAYISE 108 FY ++FRGTPL +QL + + G+ P + F D+ I++ TLN AY +E Sbjct: 60 QFYTYLFRGTPLYIQLLICYTGIYSIAAVREQPMLDAFFRDAMNCTILAFTLNTCAYTTE 119 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I +I S+ G+ +A+ A GLT + ++I+P + S S+E I +L ST+VA T Sbjct: 120 IFAGAIRSMAHGEVEAAKAYGLTGWKLYAYVIMPSVLRRSLPYYSNEVILMLHSTTVAFT 179 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 T+P+I + A+ S T+ + A +YL +T Sbjct: 180 ATVPDILKVARDANSATFMTFQSFGIAAAMYLTVT 214 >gi|260221297|emb|CBA29721.1| Histidine transport system permease protein hisM [Curvibacter putative symbiont of Hydra magnipapillata] Length = 237 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 107/208 (51%), Gaps = 16/208 (7%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 QL I TL + S I ++ A + + I+ ++ Y ++ RGTPLL+Q+ Sbjct: 13 QLYITGIYTTLGLLASSLAIGAVLALIFA-LALTSRWAILRWVVGSYTYVIRGTPLLIQV 71 Query: 75 FVIFYGLPHIGIV-------------FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 ++I+YGL + + + F +++ +LN + Y +E++ +I G+ Sbjct: 72 YLIYYGLGQLEWIQARWDDVWPWTHFKEPFFCALLAFSLNTAGYTAEMLAGAIRETAAGE 131 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI-TIPEIFQTAQR 180 +A+ A G++R Q +R I+LP + + S+E + +L+STS+AS + ++ ++ A R Sbjct: 132 LEAAQAYGMSRFQAMRRIVLPSALRRTLPAYSNEVVMMLQSTSLASAVPSMLDVTAAASR 191 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYI 208 + S Y P Y A +YL+ SFC I Sbjct: 192 VYSDYYLPFEAYIAAAAIYLV-ASFCLI 218 >gi|159904019|ref|YP_001551363.1| ABC-type amino acid transport system, permease component [Prochlorococcus marinus str. MIT 9211] gi|159889195|gb|ABX09409.1| ABC-type amino acid transport system, permease component [Prochlorococcus marinus str. MIT 9211] Length = 297 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 118/227 (51%), Gaps = 28/227 (12%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 DS+ ++ + +L + S +I+ IIGF + + R ++ +I L+ YV + R PL Sbjct: 63 DSYLWAIFMGWLNSLKVIFASLLIATIIGFLVGIARTG-NNILIGLLSSAYVSLIRQIPL 121 Query: 71 LVQL----FVIFY------------------GLPHIGIVFDS-FVAIIISLTLNFSAYIS 107 L+QL FV F GL +G F + F A+++ L++ AYIS Sbjct: 122 LLQLMFWYFVGFLSISNSFYPINNIVEISNQGLIFLGFNFSAEFSALLLGLSVFTGAYIS 181 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E++R I S+ KGQW+A ++GL+ + +I+PQ + L+S+++++ K++++A Sbjct: 182 EVVRGGIQSVAKGQWEAFRSLGLSETAGLYKVIMPQALPAILPGLTSQYLNLAKNSTLAI 241 Query: 168 TITIPEIFQTAQRIVSTTYQP----LIIYCELAFVYLILTSFCYIIQ 210 + +I+ + +++ T + +++ F+ LI+++ II Sbjct: 242 AVGYADIYAISDTVITQTGRAVEGFILLLTGFLFLNLIISNLMEIIN 288 >gi|331017446|gb|EGH97502.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 229 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 110/225 (48%), Gaps = 18/225 (8%) Query: 18 YAAIVV-----TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 Y A+++ TL +A S +++++G +R+ I+ + Y + RG P LV Sbjct: 5 YGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLS-PVRWIAWLGDLYSTVVRGIPDLV 63 Query: 73 QLFVIFYG--------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + +IFYG P +G I D +A I +L F Y+SE R + ++IPKG Sbjct: 64 LILLIFYGGQDLLNRVAPLLGFDDYIDLDPLLAGICTLGFIFGVYLSETFRGAFMAIPKG 123 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A A GL+ + I++PQ I + ++ ++ + K+T++ S + + ++ A++ Sbjct: 124 QAEAGMAYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQ 183 Query: 181 IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 T +P + +A +YL++TS + +E + + D Sbjct: 184 AADATREPFTFFLAVAAMYLVITSVSLLALRYLEKRYSVGVRAAD 228 >gi|183598313|ref|ZP_02959806.1| hypothetical protein PROSTU_01703 [Providencia stuartii ATCC 25827] gi|188020487|gb|EDU58527.1| hypothetical protein PROSTU_01703 [Providencia stuartii ATCC 25827] Length = 246 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/235 (25%), Positives = 114/235 (48%), Gaps = 34/235 (14%) Query: 17 LYAAIVVTLPIACISFVISLIIG-FFIAVIRIFFSDTIISLIMHFYVWIFRGTP-LLVQL 74 L +A +T+ +A + ++ LI+ F A + F I+ + +V + RG P LLV L Sbjct: 7 LTSAAGITVGLAVSALILGLILAMLFTAWESVRFKP--IAFLGTCWVTLIRGLPELLVVL 64 Query: 75 FVIFYGLPHIGIVFDS------------------------------FVAIIISLTLNFSA 104 FV F L I I+ D F +++L L +++ Sbjct: 65 FVYFGTLQLINILGDGIEINLGFWQTTLQIDPSIFFADSGEFDFTPFACGVVALALLYAS 124 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 Y S+ +R ++ ++P GQW+A A+GLT++ I+PQ + L ++++ +LK T+ Sbjct: 125 YASQTLRGALKAVPYGQWEAGLALGLTKRTIFFRFIMPQMWRHALPGLGNQWLVLLKDTA 184 Query: 165 VASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + S I++ ++ + IV+ T++P Y + +YL +T +I +IE T+ Sbjct: 185 LVSLISVNDLMLQTKTIVNRTHEPFTWYAIVGLIYLAITLLSQVILKRIELRTTR 239 >gi|33603522|ref|NP_891082.1| glutamate/aspartate transport system permease protein [Bordetella bronchiseptica RB50] gi|33577646|emb|CAE34911.1| glutamate/aspartate transport system permease protein [Bordetella bronchiseptica RB50] Length = 229 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 107/207 (51%), Gaps = 10/207 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I S L +V TL + +S + L +G +A+ R+ +S + YV Sbjct: 6 FDVIGRSLGYLFRDGMVFTLKLTFLSTAMGLALGTLLAMCRLS-GIRPLSAVAAAYVNGL 64 Query: 66 RGTPLLVQLFVIFYGLPHIG---------IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 R PL++ +F ++ +P+IG + F + +I+ TL +AY EI+R+ I S Sbjct: 65 RALPLILVIFWFYFLVPYIGGWLTGAGRPLQVGGFTSALITFTLFEAAYFCEIMRAGIQS 124 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQ A+YAIGL QT+ +++LPQ + A L ++ I + + TS+ +++ + Sbjct: 125 IPRGQTSAAYAIGLNYWQTMAYVVLPQALRNMAPVLLTQTIVLFQDTSLVYVLSLTDFLG 184 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 + + + +Y +A VY +++ Sbjct: 185 AGINVAQRDNRLVEMYLFVAAVYFVMS 211 >gi|114706426|ref|ZP_01439328.1| polar amino acid ABC transport permease protein aapM-1 [Fulvimarina pelagi HTCC2506] gi|114538287|gb|EAU41409.1| polar amino acid ABC transport permease protein aapM-1 [Fulvimarina pelagi HTCC2506] Length = 497 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 16/204 (7%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P L+ +++TL +A SL G +A+ R + LI ++ +RG PL+ Sbjct: 281 PTNLWGGLMLTLVVALSGIAASLPFGVLLALGRRSHMPAV-RLICVIFIEFWRGVPLITV 339 Query: 74 LFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LF+ + LP G+ F+S + ++ + L SAY++E++R + +IPKGQ++ + A+ L Sbjct: 340 LFMATFMLPLFMPEGVNFNSLLRALVGVALFASAYMAEVVRGGLQAIPKGQYEGADAMAL 399 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR-------IVS 183 + Q R IILPQ + + + FI + K TS+ I + ++ T +R I Sbjct: 400 SYWQKTRLIILPQALKIVIPGIVNTFIGLFKDTSLVYIIGLADLLGTVKRGFADPNWITP 459 Query: 184 TTYQPLIIYCELAFVYLILTSFCY 207 TT +++ AFVY FC+ Sbjct: 460 TTPATGLLFA--AFVYW---CFCF 478 >gi|89898981|ref|YP_521452.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89343718|gb|ABD67921.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 220 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/198 (28%), Positives = 106/198 (53%), Gaps = 2/198 (1%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F ++ +P LL + +T+ + S ++ + G A R+ ++ ++ YV + Sbjct: 6 FGTVLAQWPMLLRG-LGLTVTLTAFSALLGTLAGTACAWARLH-GGPMLKRVVGAYVELV 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP ++QLF IF+GLP +G+ +A ++++ LN AY EI+R+ + + P+GQ +A+ Sbjct: 64 RNTPFIIQLFFIFFGLPSLGLRLSVEMASVLAMVLNLGAYACEIVRAGLQTTPRGQLEAA 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 ++ LT QT ++LP + L S+ I ++ ++V I+ E+ Q A I S T Sbjct: 124 MSLALTPWQTFSRVVLPPALARIWPALVSQIIIVMLGSAVCGQISAEELSQAANLISSRT 183 Query: 186 YQPLIIYCELAFVYLILT 203 ++ Y + +YL+L Sbjct: 184 FRSFESYIIVTGIYLLLA 201 >gi|312881585|ref|ZP_07741363.1| hypothetical protein VIBC2010_10047 [Vibrio caribbenthicus ATCC BAA-2122] gi|309370648|gb|EFP98122.1| hypothetical protein VIBC2010_10047 [Vibrio caribbenthicus ATCC BAA-2122] Length = 365 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 6/194 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + ++VTL IA + V+SL IG +A+ R II I Y+ I+RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGIALALGRRS-EMPIIRSICTVYIEIWRGVPLITVLFMA 213 Query: 78 FYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 LP G D + +I + + +AY++E+IR + +IPKGQ++A+ A+GLT + Sbjct: 214 SVMLPLFLAEGSETDKLIRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLTYWK 273 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + IILPQ + + + + FI + K TS+ I + ++ Q +T + L E Sbjct: 274 KMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPEWLGFATE 332 Query: 195 -LAFVYLILTSFCY 207 FV L+ FC+ Sbjct: 333 SYVFVALVFWVFCF 346 >gi|116255413|ref|YP_771246.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115260061|emb|CAK03160.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 241 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 107/206 (51%), Gaps = 13/206 (6%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + LL AA ++TL + + I ++G +A ++ + I+ + + Y +FRG P L Sbjct: 13 GWGALLIAATLMTLAVTATALAIGAVLGAIVAAAKLS-GNIILVTLGNVYTTVFRGVPEL 71 Query: 72 VQLFVIFYG----LPHIGIVFD--------SFVAIIISLTLNFSAYISEIIRSSIISIPK 119 + +++I++G + IG SF+A +++ + +Y +E+ R + ++I K Sbjct: 72 LIIYLIYFGGSSAVTAIGKAMGYEGFLGLPSFIAGALAVGIISGSYQAEVFRGAFLAISK 131 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G+ +A+ AIG+ R +R II+PQ + L + + LK +++ S + E+ +T+Q Sbjct: 132 GELEAASAIGMHRGMRLRRIIMPQVFRLAIPGLGNVWQLSLKDSALISVTGLAELMRTSQ 191 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSF 205 +T Q + + +YL+LTS Sbjct: 192 VAAGSTRQYFLFFIAGGCLYLLLTSL 217 >gi|323127864|gb|ADX25161.1| Amino acid ABC transporter permease protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 267 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 16/210 (7%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W + + D+ P ++ + +TL + V LI+ A+++I I+ I +V Sbjct: 26 FSW-HAVFDAIPNII-QRLPITLGLTLAGAVFGLILALIFAIVKIN-KVKILYPIQAVFV 82 Query: 63 WIFRGTPLLVQLFVIFYGLP------HIGIVFD-------SFVAIIISLTLNFSAYISEI 109 RGTP+LVQL + +YG+P + FD + V I + N +AY SE Sbjct: 83 SFLRGTPILVQLMLTYYGIPLFLKFLNQKYGFDWNINAIPASVFAITAFAFNEAAYASET 142 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IR++I+S+ G+ +A+ ++G+T Q R +I+P + L + I + K TS+A Sbjct: 143 IRAAILSVDTGEIEAAKSLGMTSVQVYRRVIIPNAAVVAIPTLINGLIGLTKGTSLAFNA 202 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I E+F AQ + + Y+ Y +A VY Sbjct: 203 GIVEMFAQAQILGGSDYRYFERYISVALVY 232 >gi|329999713|ref|ZP_08303488.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|328538244|gb|EGF64390.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 308 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 19/178 (10%) Query: 61 YVWIFRGTPLLVQLFVIFY----------GLPHIGIVFDSFVAI---------IISLTLN 101 Y+W+FR PL+V L +++ G+P G+ + S+ I ++ LTL Sbjct: 98 YIWLFRSLPLIVVLIILYNFSYLYDTLSLGIPFTGVTWASYQTINVLGQFSTAVVGLTLV 157 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 SAY +EIIR + + GQ++A+ A+GL + IILPQ + T +E IS+ K Sbjct: 158 QSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTILPSGFNEIISLAK 217 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ + +PE+F T Q I + T + + + A YL +TS IQ +E + + Sbjct: 218 GTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAAWYLAITSVLSAIQYLVERGLAR 275 >gi|291518712|emb|CBK73933.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Butyrivibrio fibrisolvens 16/4] Length = 157 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/125 (36%), Positives = 71/125 (56%), Gaps = 13/125 (10%) Query: 71 LVQLFVIFYGLPHIGIVFDS----------FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 ++QL +IFYG P GI F + F A +++ N++ Y SEI R I SIPKG Sbjct: 1 MLQLLIIFYG-P--GIFFGTNLWGSGDGGRFTAALVAFVFNYACYFSEIFRGGIQSIPKG 57 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ +GLT+ QT I+L Q + P+S+E I+++K TS+A I EI +R Sbjct: 58 QYEAAAVLGLTKTQTFFKIVLLQVVKRIVPPISNEVITLVKDTSLARVIAFYEIIWEGER 117 Query: 181 IVSTT 185 + + Sbjct: 118 FIKSA 122 >gi|118586386|ref|ZP_01543835.1| glutamine ABC transporter, integral membrane protein [Oenococcus oeni ATCC BAA-1163] gi|118433173|gb|EAV39890.1| glutamine ABC transporter, integral membrane protein [Oenococcus oeni ATCC BAA-1163] Length = 214 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/181 (33%), Positives = 102/181 (56%), Gaps = 4/181 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + I+ + S ++G A+++I T ++I Y+ +FR PLL+ V+F+ L Sbjct: 19 TLLSSIIALIASTVLGTLFAILQIVPIKTA-NVIARAYIEVFRNIPLLI--IVMFFYLVV 75 Query: 84 IGIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 IV F A I LTL SA+I+E +R+ I S+ GQ + + A GL+ QT+R IILP Sbjct: 76 TKIVKIGGFTAGTIGLTLYTSAFIAETVRAGINSVGIGQTEGARANGLSFWQTLRIIILP 135 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + L ++FI+++K++S+ + + ++ TA + +TT+ Y + YLI+ Sbjct: 136 QAFKIAIPSLGNQFINLVKNSSILAFVAGGDLMYTANNVAATTFDSFNSYIIVGIFYLII 195 Query: 203 T 203 T Sbjct: 196 T 196 >gi|37679739|ref|NP_934348.1| ABC-type amino acid transport system, permease component [Vibrio vulnificus YJ016] gi|37198484|dbj|BAC94319.1| ABC-type amino acid transport system, permease component [Vibrio vulnificus YJ016] Length = 372 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 105/195 (53%), Gaps = 8/195 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFV 76 + ++VTL IA + V+SL IG +A+ R SD II + Y+ ++RG PL+ LF+ Sbjct: 162 WGGLLVTLIIALVGIVVSLPIGVALALGRR--SDMPIIRSLCTVYIEVWRGVPLITVLFM 219 Query: 77 IFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G D + +I + + +AY++E++R + +IPKGQ++A+ A+GLT Sbjct: 220 ASVMLPLFLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLTYW 279 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + + IILPQ + + + + FI + K TS+ I + ++ Q +T + L Sbjct: 280 KKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQ-AANTDPEWLGFAT 338 Query: 194 E-LAFVYLILTSFCY 207 E FV L+ FC+ Sbjct: 339 ESYVFVALVFWVFCF 353 >gi|167578033|ref|ZP_02370907.1| histidine transport system permease protein [Burkholderia thailandensis TXDOH] Length = 237 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 95/183 (51%), Gaps = 13/183 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+S+ +GF +AV I + +S + Y ++FRGTPL VQL + + G+ + +V D Sbjct: 31 VVSIGLGFGLAVPLAIARASRNRAVSGAVWLYTYVFRGTPLYVQLLLCYTGIYSLSVVHD 90 Query: 90 ----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + +++ TLN AY +EI +I S G+ +A A G++R + + Sbjct: 91 HAWLDSFFRSAMNCTLLAFTLNECAYATEIFAGAIKSTAPGEIEAGLAYGMSRFKLYTRV 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILP + + S+E I +L +T++A T T+P+I + + + S TY Y A +Y Sbjct: 151 ILPSALRRALPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYASFQAYGIAAALY 210 Query: 200 LIL 202 ++ Sbjct: 211 ALI 213 >gi|153840658|ref|ZP_01993325.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AQ3810] gi|149745678|gb|EDM56809.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AQ3810] Length = 185 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 86/133 (64%), Gaps = 6/133 (4%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII-SLIMHFYVWIFRGTPLL 71 +P L ++VTL I+ IS +L++G A++R+ SD+ + ++I YV + R TPLL Sbjct: 56 WPAELIDGLLVTLNISAISLFFTLVLGLVTALLRL--SDSKVGNVIGTTYVEVIRNTPLL 113 Query: 72 VQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 VQ++++++ P IG+ D F +++L+L AY +EI R+ + SIPKGQ++A+ +GL Sbjct: 114 VQIYLLYFVFGPVIGL--DRFSTAVLALSLFQGAYTAEIFRAGLNSIPKGQFEAAQTLGL 171 Query: 131 TRKQTIRHIILPQ 143 + T + +ILPQ Sbjct: 172 SPFYTYKDVILPQ 184 >gi|27365996|ref|NP_761524.1| amino acid ABC transporter permease [Vibrio vulnificus CMCP6] gi|27362196|gb|AAO11051.1| Amino acid ABC transporter, permease protein [Vibrio vulnificus CMCP6] Length = 365 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 105/195 (53%), Gaps = 8/195 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFV 76 + ++VTL IA + V+SL IG +A+ R SD II + Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVALALGRR--SDMPIIRSLCTVYIEVWRGVPLITVLFM 212 Query: 77 IFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G D + +I + + +AY++E++R + +IPKGQ++A+ A+GLT Sbjct: 213 ASVMLPLFLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLTYW 272 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + + IILPQ + + + + FI + K TS+ I + ++ Q +T + L Sbjct: 273 KKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPEWLGFAT 331 Query: 194 E-LAFVYLILTSFCY 207 E FV L+ FC+ Sbjct: 332 ESYVFVALVFWVFCF 346 >gi|324993848|gb|EGC25767.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK405] gi|324994831|gb|EGC26744.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK678] gi|325687272|gb|EGD29294.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK72] Length = 219 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 109/196 (55%), Gaps = 15/196 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I+ IS V+S I G +AV+R + ++ LI Y+ R P L+ +F IF Sbjct: 22 LTLQISFISIVLSTIFGTILAVMR-NGKNKLLKLIASIYIEFVRNVPNLLWIFTIF---- 76 Query: 83 HIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 +VF S A IIS T+ SA ++EIIR + +I GQ +A + G T+ Q +R+II Sbjct: 77 ---LVFQIKSTPAGIISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRYII 133 Query: 141 LPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 LPQ I + S+F++++K TS+ S I + E+F +AQ ++ ++ ++ +Y Sbjct: 134 LPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFA----LY 189 Query: 200 LILTSFCYIIQIKIES 215 L++ + ++I I S Sbjct: 190 LLVAAIYFLINFAISS 205 >gi|317014556|gb|ADU81992.1| amino acid ABC transporter permease [Helicobacter pylori Gambia94/24] Length = 217 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 106/201 (52%), Gaps = 5/201 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + + S P L + +TL I+ +++L++GF A++ ++F +S +++ Sbjct: 1 MALDW-DFMFRSIPMFL-KGLELTLYISFFGILLALLVGFLCAIV-LYFKTRFLSPVVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QRESALSLGFGPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQPLIIYCELAFVYLI 201 ++ Y+ L+ YLI Sbjct: 176 LIGIYYKTTESLLMLSLTYLI 196 >gi|111221812|ref|YP_712606.1| amino acid ABC transporter membrane protein [Frankia alni ACN14a] gi|111149344|emb|CAJ61032.1| putative amino acid transport protein (ABC superfamily, membrane) [Frankia alni ACN14a] Length = 248 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 79/137 (57%), Gaps = 3/137 (2%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEII 110 + L+ Y +FRG P+++ L+++ +G+P + G+ D V +L L +SAY++E+ Sbjct: 57 VRLLAAAYTDLFRGLPVILVLYLVGFGVPALRLRGLPTDPLVLGGAALVLTYSAYVAEVF 116 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R+ I S+ Q A+ ++GLT QT+R ++LPQ + PL ++ IS+ K +S+ S + Sbjct: 117 RAGIESVHPSQVAAARSLGLTHAQTMRRVVLPQAVRRVTPPLLNDAISLQKDSSLVSVLG 176 Query: 171 IPEIFQTAQRIVSTTYQ 187 + + + AQ S + Sbjct: 177 VVDAVRAAQIATSANFN 193 >gi|320156511|ref|YP_004188890.1| amino acid ABC transporterpermease [Vibrio vulnificus MO6-24/O] gi|319931823|gb|ADV86687.1| amino acid ABC transporter, permease protein [Vibrio vulnificus MO6-24/O] Length = 365 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 105/195 (53%), Gaps = 8/195 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFV 76 + ++VTL IA + V+SL IG +A+ R SD II + Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVALALGRR--SDMPIIRSLCTVYIEVWRGVPLITVLFM 212 Query: 77 IFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G D + +I + + +AY++E++R + +IPKGQ++A+ A+GLT Sbjct: 213 ASVMLPLFLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLTYW 272 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + + IILPQ + + + + FI + K TS+ I + ++ Q +T + L Sbjct: 273 KKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPEWLGFAT 331 Query: 194 E-LAFVYLILTSFCY 207 E FV L+ FC+ Sbjct: 332 ESYVFVALVFWVFCF 346 >gi|152970451|ref|YP_001335560.1| glutamate/aspartate ABC transporter membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955300|gb|ABR77330.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 308 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 19/178 (10%) Query: 61 YVWIFRGTPLLVQLFVIFY----------GLPHIGIVFDSFVAI---------IISLTLN 101 Y+W+FR PL+V L +++ G+P G+ + S+ I ++ LTL Sbjct: 98 YIWLFRSLPLIVVLIILYNFSYLYDTLSLGIPFTGVTWASYQTINVLGQFSTAVVGLTLV 157 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 SAY +EIIR + + GQ++A+ A+GL + IILPQ + T +E IS+ K Sbjct: 158 QSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTILPSGFNEIISLAK 217 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ + +PE+F T Q I + T + + + A YL +TS IQ +E + + Sbjct: 218 GTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAAWYLAITSVLSAIQYLVERGLAR 275 >gi|107023343|ref|YP_621670.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116690426|ref|YP_836049.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|105893532|gb|ABF76697.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia cenocepacia AU 1054] gi|116648515|gb|ABK09156.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia cenocepacia HI2424] Length = 237 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 102/195 (52%), Gaps = 13/195 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL + +S + + +AV R+ +S + Y ++FRGTPL VQL + + Sbjct: 22 GVAITLWLLVVSIGLGFCLSVPLAVARVS-KRKWLSGAVWLYTYVFRGTPLYVQLLLCYT 80 Query: 80 GL---------PHIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 GL P + F D +++ TLN AY +EI +I + G+ +A+ A G Sbjct: 81 GLYSLQAVRGTPMLDAFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYG 140 Query: 130 LTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 ++ R +ILP + A+PL S+E I +L +T+VA T T+P+I + A+ + S TY Sbjct: 141 MSPFTMYRRVILPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMS 199 Query: 189 LIIYCELAFVYLILT 203 + A +YL+++ Sbjct: 200 FHAFGIAALLYLVIS 214 >gi|152964896|ref|YP_001360680.1| polar amino acid ABC transporter, inner membrane subunit [Kineococcus radiotolerans SRS30216] gi|151359413|gb|ABS02416.1| polar amino acid ABC transporter, inner membrane subunit [Kineococcus radiotolerans SRS30216] Length = 329 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 19/210 (9%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF-----VI 77 +T+ + + I L++G +A++R+ + ++ + YV +FR PL++QL I Sbjct: 86 LTVELTLVGTAIGLVLGTVLALMRMS-GNPLLKAVSFTYVSVFRSVPLILQLLFWYNMAI 144 Query: 78 FYGLPHIGIVFDS-------------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 Y G+ F A + L L+ +AY +EI+RS +++ GQ +A Sbjct: 145 LYDRIGFGVPFGPQFWTISTQDLIGPVTAAFLGLGLHQAAYFAEIVRSGFLAVDPGQREA 204 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G+ R + R I LPQ + +E I +LK TSV + +PE+F Q + + Sbjct: 205 AAALGIPRLRQFRRIQLPQALRVIVPTTGNEVIGLLKGTSVVYVMALPELFYQVQVVYNR 264 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 T Q + + A Y +LT+ +Q +E Sbjct: 265 TGQVIPLLLVAAVWYFVLTTALSALQWLVE 294 >gi|222102299|ref|YP_002546889.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Agrobacterium radiobacter K84] gi|221728416|gb|ACM31425.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Agrobacterium radiobacter K84] Length = 237 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/233 (27%), Positives = 117/233 (50%), Gaps = 30/233 (12%) Query: 2 KYEWFNLIIDS--FPQLLYAAIVVTLPIACISFVISLIIGF-----------FIAVIRIF 48 + WF L + + P+L+ AA VT+ +A + F +L +G IA IF Sbjct: 10 QLNWFRLDVAAAILPKLISAA-NVTIYVAILGFAGALAVGIPLLMARRSRFVLIAGPGIF 68 Query: 49 FSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISE 108 +D I R TPLL Q++ F+ LP GI+ I++L +++ +++E Sbjct: 69 LADFI------------RSTPLLQQIYFYFFVLPQAGIILPPITTGILALAIHYGCFVAE 116 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 R+ + ++P GQ DA A+G +R RH+I+PQ + L + +SI K T + ++ Sbjct: 117 AYRAGLEALPSGQRDAITALGFSRFAAYRHVIVPQLVPFLIPALGNLLVSIFKETPLLAS 176 Query: 169 ITIPEIFQTAQRIVSTTYQPL--IIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 I + +I A + + +Q + I C L ++L+++ +I ++E+ V++ Sbjct: 177 IAVTDIMFVAMQYGADHFQYIEPITMCGL--IFLVISLATSLIVRRLEAMVSK 227 >gi|332367137|gb|EGJ44873.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1059] Length = 219 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 109/196 (55%), Gaps = 15/196 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I+ IS V+S I G +AV+R + ++ LI Y+ R P L+ +F IF Sbjct: 22 LTLQISFISIVLSTIFGTILAVMR-NGKNKLLKLIASVYIEFVRNVPNLLWIFTIF---- 76 Query: 83 HIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 +VF S A IIS T+ SA ++EIIR + +I GQ +A + G T+ Q +R+II Sbjct: 77 ---LVFQIKSTPAGIISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRYII 133 Query: 141 LPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 LPQ I + S+F++++K TS+ S I + E+F +AQ ++ ++ ++ +Y Sbjct: 134 LPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFA----LY 189 Query: 200 LILTSFCYIIQIKIES 215 L++ + ++I I S Sbjct: 190 LLVAAIYFLINFAISS 205 >gi|78063223|ref|YP_373131.1| ABC His/Glu/Gln/Arg/opine transporter, inner membrane subunit [Burkholderia sp. 383] gi|77971108|gb|ABB12487.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia sp. 383] Length = 237 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 95/182 (52%), Gaps = 13/182 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-----PHI 84 V+S+ +GF +AV I S+ IS + Y ++FRGTPL VQL + + G+ H Sbjct: 31 VVSIALGFALAVPLAIARASSNRWISGPVWLYTYVFRGTPLYVQLLMCYTGIYSLQVVHN 90 Query: 85 GIVFDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 ++ D+F +++ LN AY +EI +I + G+ +A A G++R + I Sbjct: 91 HVLLDTFFRNAMNCTLLAFVLNECAYATEIFAGAIKATSAGEIEAGMAYGMSRFKLYTRI 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILP + S S+E I +L +T++A T T+P+I + + + S TY Y A +Y Sbjct: 151 ILPSALRRSLPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYMSFQAYGIAAVLY 210 Query: 200 LI 201 + Sbjct: 211 AV 212 >gi|238894936|ref|YP_002919670.1| amino acid ABC transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|238547252|dbj|BAH63603.1| amino acid ABC transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 308 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 19/178 (10%) Query: 61 YVWIFRGTPLLVQLFVIFY----------GLPHIGIVFDSFVAI---------IISLTLN 101 Y+W+FR PL+V L +++ G+P G+ + S+ I ++ LTL Sbjct: 98 YIWLFRSLPLIVVLIILYNFSYLYDTLSLGIPFTGVTWASYQTINVLGQFSTAVVGLTLV 157 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 SAY +EIIR + + GQ++A+ A+GL + IILPQ + T +E IS+ K Sbjct: 158 QSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTILPSGFNEIISLAK 217 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 T++ + +PE+F T Q I + T + + + A YL +TS IQ +E + + Sbjct: 218 GTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAAWYLAITSVLSAIQYLVERGLAR 275 >gi|125718376|ref|YP_001035509.1| arginine/histidine ABC transporter permease [Streptococcus sanguinis SK36] gi|323351207|ref|ZP_08086863.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] gi|125498293|gb|ABN44959.1| ABC transporter membrane-spanning permease, arginine/histidine transport, putative [Streptococcus sanguinis SK36] gi|322122431|gb|EFX94142.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] Length = 219 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 109/196 (55%), Gaps = 15/196 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I+ IS V+S I G +AV+R + ++ LI Y+ R P L+ +F IF Sbjct: 22 LTLQISFISIVLSTIFGTILAVMR-NGKNKLLKLIASIYIEFVRNVPNLLWIFTIF---- 76 Query: 83 HIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 +VF S A IIS T+ SA ++EIIR + +I GQ +A + G T+ Q +R+II Sbjct: 77 ---LVFQIKSTPAGIISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRYII 133 Query: 141 LPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 LPQ I + S+F++++K TS+ S I + E+F +AQ ++ ++ ++ +Y Sbjct: 134 LPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFA----LY 189 Query: 200 LILTSFCYIIQIKIES 215 L++ + ++I I S Sbjct: 190 LLVAAIYFLINFAISS 205 >gi|332093515|gb|EGI98573.1| histidine transport system permease protein hisQ [Shigella boydii 3594-74] Length = 204 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 93/183 (50%), Gaps = 12/183 (6%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP---------- 82 ++++IIG A ++ + + LI Y + RG P LV + +IF+GL Sbjct: 1 MLAVIIGLIGAGGKLS-QNRLSGLIFEGYTTLIRGVPDLVLMLLIFFGLQIALNTVTEAM 59 Query: 83 HIG-IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 +G I D VA II+L + AY +E R + +++PKG +A+ A G TR Q R I+ Sbjct: 60 GVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMF 119 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 P + + + + + ILKST++ S + + ++ + Q +T++P +YL+ Sbjct: 120 PAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLAGKSTWEPFYFAIVCGVIYLV 179 Query: 202 LTS 204 T+ Sbjct: 180 FTT 182 >gi|170700298|ref|ZP_02891311.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170134785|gb|EDT03100.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 261 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 10/177 (5%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM-HFYVWIFRGTPLLVQL 74 +L A++V + I+ I+ I + G + + + S I+ +M YV +FR PLLV + Sbjct: 49 VLGKAMLVNIGISTIAIAIGTLTGLVLGPLTL--SRLGIARVMARAYVQLFRNAPLLVLI 106 Query: 75 FVIFYGLP------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 + Y P H + F + + + L L SA +EI R +I SIP QWDA+ ++ Sbjct: 107 YFSTYVFPFEIRFGHASLPFPDWFKVTLGLALPASANFAEIFRGAIQSIPHAQWDAARSL 166 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 +R Q R IILPQ + P + + SI +T++AS + + ++ TAQ + S T Sbjct: 167 AFSRVQVFRWIILPQCVRRMLPPWMNLYASIAMATALASLVGVHDLLDTAQ-VASNT 222 >gi|58698603|ref|ZP_00373500.1| amino acid ABC transporter, permease protein SP1502 [Wolbachia endosymbiont of Drosophila ananassae] gi|225630094|ref|YP_002726885.1| amino acid ABC transporter, permease [Wolbachia sp. wRi] gi|58534873|gb|EAL58975.1| amino acid ABC transporter, permease protein SP1502 [Wolbachia endosymbiont of Drosophila ananassae] gi|225592075|gb|ACN95094.1| amino acid ABC transporter, permease [Wolbachia sp. wRi] Length = 215 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 1/154 (0%) Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + RGTPL++QL V+++ P I GI + F A II+ LN AYI+EI+R+ I +I K Q+ Sbjct: 55 VIRGTPLILQLSVVYFMTPTIAGIKLNIFSAGIIAFGLNSCAYIAEILRAGIETISKNQF 114 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ + + R IILPQ I + +E I++LK T++ STI +I ++AQ + Sbjct: 115 EAAKTLQIPSFYMWRDIILPQVIKNILPAMINEIIALLKETALISTIGGVDIMRSAQMLA 174 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 + + I C Y L I KIE Sbjct: 175 AEQFTYFIPLCLAGAYYYALVLLIEYIGKKIEQK 208 >gi|330502656|ref|YP_004379525.1| arginine/ornithine ABC transporter permease [Pseudomonas mendocina NK-01] gi|328916942|gb|AEB57773.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas mendocina NK-01] Length = 229 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 110/215 (51%), Gaps = 18/215 (8%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 +T+ +A +S +++ +G A R+ ++L+ Y + RG P LV + +IF+G Sbjct: 15 LTVQLALLSMAVAVALGLLGAAFRLS-PVKWLALMGETYATVIRGIPELVLILLIFFGGQ 73 Query: 81 ------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P +G I + FVA + +L + AY+SE R + ++IPKGQ +A A G+ Sbjct: 74 DLVNRIAPLLGHEDYIDINPFVAGVGTLGFIYGAYLSETFRGAFMAIPKGQGEAGMAYGM 133 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + + I++PQ I + +++ ++ ++K+T++ S + + ++ A+ T +P I Sbjct: 134 SPLRVFLRILVPQMIRMAIPGITNNWLVLVKATALISLVGLQDMMARAKSAGDATREPFI 193 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 +A VYL +TS ++ IE YSV Sbjct: 194 YILLVAAVYLAITSVSLLVLRYIE-----RRYSVG 223 >gi|327474723|gb|EGF20128.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK408] gi|327490280|gb|EGF22068.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1058] gi|328946747|gb|EGG40885.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1087] Length = 219 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 109/196 (55%), Gaps = 15/196 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I+ IS V+S I G +AV+R + ++ LI Y+ R P L+ +F IF Sbjct: 22 LTLQISFISIVLSTIFGTILAVMR-NGKNKLLKLIASIYIEFVRNVPNLLWIFTIF---- 76 Query: 83 HIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 +VF S A IIS T+ SA ++EIIR + +I GQ +A + G T+ Q +R+II Sbjct: 77 ---LVFQIKSTPAGIISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRYII 133 Query: 141 LPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 LPQ I + S+F++++K TS+ S I + E+F +AQ ++ ++ ++ +Y Sbjct: 134 LPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFA----LY 189 Query: 200 LILTSFCYIIQIKIES 215 L++ + ++I I S Sbjct: 190 LLVAAIYFLINFAISS 205 >gi|26991430|ref|NP_746855.1| amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] gi|24986503|gb|AAN70319.1|AE016673_4 amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] gi|313500660|gb|ADR62026.1| Amino acid ABC transporter, permease protein [Pseudomonas putida BIRD-1] Length = 219 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 2/135 (1%) Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RG P L+ L ++GLP + + SF A +++ +AY SEIIR I S+ GQ +A+ Sbjct: 63 RGAPALILLQYFYFGLPSVNLTLTSFWAAALAMAYCTAAYTSEIIRGGIESVAAGQTEAA 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 IGL R +R +ILPQ + + L I + +++S+ TI +PEI A I S+T Sbjct: 123 EVIGLNRFDALRFVILPQALRVALPSLLGFSIMMFQASSLCFTIALPEIVSRASSIGSST 182 Query: 186 --YQPLIIYCELAFV 198 Y P++I L + Sbjct: 183 FEYMPVLILAGLMYA 197 >gi|315652803|ref|ZP_07905777.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Eubacterium saburreum DSM 3986] gi|315485005|gb|EFU75413.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Eubacterium saburreum DSM 3986] Length = 223 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 91/150 (60%), Gaps = 4/150 (2%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIII 96 +G + V+ + F + I+ ++ Y+ R P LV LF++F+G + G+ +A +I Sbjct: 39 LGILVGVL-MTFKNPILKAVLRVYLEFIRIMPQLVLLFIVFFGSTRVLGVDISGDLAAVI 97 Query: 97 SLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF 156 +L +A + +++R +IISIPK Q+++ A+GL+++Q +II+PQTI VPLS Sbjct: 98 VFSLWGTAEMGDLVRGAIISIPKHQYESGEALGLSKRQIFIYIIIPQTI-KRLVPLSINL 156 Query: 157 IS-ILKSTSVASTITIPEIFQTAQRIVSTT 185 I+ ++K+TS+ I + E+ + AQ+I+ Sbjct: 157 ITRMIKTTSLVLIIGVVEVIKVAQQIIEAN 186 >gi|323232025|gb|EGA16132.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] Length = 229 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 98/186 (52%), Gaps = 1/186 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L I TL + F+ + G +AV+R S + I+ V+I RG P+L+ +F+ Sbjct: 8 LLEGIGNTLLVTFTCFLSAFFTGLTVAVLR-RLSPLPLQKILDAMVFILRGIPILIAVFL 66 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GLP IGI VA+ +S+ L +Y++E+ R ++ + + + G+ + Q I Sbjct: 67 VYFGLPSIGIYVSPLVAMNLSVGLISGSYLAEVFRGALKLVEPFEITVAKVAGMRQLQII 126 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +I LPQ + S + +EF S+LK+T A T+ I EI + A + + T L IY Sbjct: 127 LNIELPQMLRFSVPGIINEFSSVLKATPFAYTVGIAEITKQAMSLTAITLNGLQIYTLAG 186 Query: 197 FVYLIL 202 +Y I+ Sbjct: 187 VLYFII 192 >gi|238928187|ref|ZP_04659947.1| amino-acid ABC superfamily ATP binding cassette transporter permease protein [Selenomonas flueggei ATCC 43531] gi|238884147|gb|EEQ47785.1| amino-acid ABC superfamily ATP binding cassette transporter permease protein [Selenomonas flueggei ATCC 43531] Length = 225 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 110/210 (52%), Gaps = 18/210 (8%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L++ VTL + +S V++ F AV+R+ + I YV RGTPL++Q+ Sbjct: 7 LIWQGAGVTLSLTALSLVLAAPPAFCFAVLRVR-GHRVGGTIARLYVSFVRGTPLVLQIL 65 Query: 76 VIFYG--------LPHIGIVFDSFVAI------IISLTLNFSAYISEIIRSSIISIPKGQ 121 +++ + G F+ F A+ + TLN A ++E+ RS++++IPKGQ Sbjct: 66 LLYSLLPSLLNLLVKAAGSSFNVFEAVDPFWYAVFIFTLNTVALLTEVFRSALLAIPKGQ 125 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A GL+ +T H+ILPQ + + +++ ++++K TS+A +T+ +I + Sbjct: 126 LEAGAVCGLSEAETYLHVILPQALVVALPSIANITVNLIKGTSLAFLMTVKDIMAVGKVA 185 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 S Y + Y ++ VYLIL C I+Q+ Sbjct: 186 ASYGYNYIEAYLDVFIVYLIL---CTIVQL 212 >gi|330937577|gb|EGH41516.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] Length = 248 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/156 (32%), Positives = 88/156 (56%), Gaps = 15/156 (9%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI------------- 84 +G + V+R + ++S I YV IFR PLLVQLF+ ++ +P + Sbjct: 46 LGSVLGVMRTV-PNRLVSGIATVYVEIFRNVPLLVQLFIWYFLVPDLLPENLQEWYKQDL 104 Query: 85 GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQT 144 + +F+++++ L L +A + E +R+ I ++PKGQ A+ A+G Q +++LPQ Sbjct: 105 NPITSAFLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQA 164 Query: 145 ITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 165 YRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|326332071|ref|ZP_08198356.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Nocardioidaceae bacterium Broad-1] gi|325950209|gb|EGD42264.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Nocardioidaceae bacterium Broad-1] Length = 299 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 104/183 (56%), Gaps = 19/183 (10%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A++VTL + +S V+ + G +A+ R+ + +++ + FY+W FR PL+V L +IF Sbjct: 76 ALLVTLEVTAVSAVVGFVGGVVLALGRMS-GNPLVNALSWFYIWFFRSLPLVVLLIIIFN 134 Query: 80 G---LPHIGI---------VFD------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 P IGI +D FVA ++ L+LN +A+ +EIIR ++S+ GQ Sbjct: 135 ASLFFPQIGINIPFGPSLVSYDVEGLLVPFVAAVVGLSLNEAAFAAEIIRGGLLSVDHGQ 194 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ A+GL+ + +R ++LPQ + + ++ I ++K++S+ +++ ++F ++ Sbjct: 195 IEAANALGLSPWRRLRQVVLPQALRSIVPGYVNQLIGLVKASSLVYYVSLVDLFGIVYQL 254 Query: 182 VST 184 ST Sbjct: 255 EST 257 >gi|237808616|ref|YP_002893056.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] gi|237500877|gb|ACQ93470.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] Length = 520 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 117/215 (54%), Gaps = 8/215 (3%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M+++W L+ Q + A ++ + ++ +++ ++ G +A+ + + S + Sbjct: 1 MEFDWPYLLSLFQNQDFWDASLLVVELSVATWLGGIVFGMVLALAKQSHYRPL-SWLAGS 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-----IGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 Y+W+FR PLLV L + Y +P ++ F A ++++ L+ SAYI+EI R ++ Sbjct: 60 YIWLFRSLPLLV-LIIFIYNVPQFVPSSSDLLSSPFTAGLLAMILSESAYIAEIHRGGLL 118 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+ +GQ +A A+G+ R II+PQ + L++EF++I+K TS+ S I++ EI Sbjct: 119 SVHRGQTEAGRALGMRFIGIQRLIIIPQAFKIALPSLANEFVTIVKLTSLVSVISLAEIL 178 Query: 176 QTAQRIVSTTYQPLIIYCELAFVY-LILTSFCYII 209 QR+ + ++ + +A Y LI+T F +I Sbjct: 179 MVGQRLYTQNFKVMETLLAVACYYVLIVTVFDRLI 213 >gi|238026654|ref|YP_002910885.1| Polar amino acid ABC transporter inner membrane subunit [Burkholderia glumae BGR1] gi|237875848|gb|ACR28181.1| Polar amino acid ABC transporter, inner membrane subunit [Burkholderia glumae BGR1] Length = 237 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 13/197 (6%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 ++ +VVTL + S I + +AV R+ + + + Y ++FRGTPL VQL +I Sbjct: 20 FSGLVVTLWLLAASIGIGFVCAVPLAVARVS-RRRWLCVPVRLYTYVFRGTPLYVQLLLI 78 Query: 78 FYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 + GL + +V D+F +++ LN AY +EI +I + G+ +A+ A Sbjct: 79 YTGLYSLEVVRSHSLLDAFFRSGYHCTVLAFALNTCAYTTEIFAGAIRATAHGEVEAARA 138 Query: 128 IGLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 G+ R +ILP + A+PL S+E I +L +T+VA T T+P+I + A+ S TY Sbjct: 139 YGMGGWTLYRRVILPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATY 197 Query: 187 QPLIIYCELAFVYLILT 203 + A +YL ++ Sbjct: 198 LAFQSFGVAALLYLAVS 214 >gi|116249396|ref|YP_765237.1| putative ATP-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115254046|emb|CAK12443.1| putative ATP-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 511 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 14/209 (6%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W + + + P ++ + TL +A S V+ +IIG +AV+ I S + L Y Sbjct: 13 DW-DAMAEVLPSMISVGLKNTLILAAASTVLGVIIGMALAVMGISQS-RWLRLPARIYTD 70 Query: 64 IFRGTPLLVQLFVIFYGLPHIGI-VFDS--FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 IFRG P +V + +I G IG +F F I++L+L AYI EI RS I S+ +G Sbjct: 71 IFRGLPAIVTILIIGQGFARIGREIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERG 130 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS----VASTITIPEIFQ 176 Q +A A+ ++ Q +R I++PQ I L ++FI +K +S + + EIF+ Sbjct: 131 QMEACRALSMSHGQGMRLIVIPQGIRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFR 190 Query: 177 TAQR--IVSTTYQPLIIYCELAFVYLILT 203 Q +V+ PL++ YL++T Sbjct: 191 VGQDQAVVTGNLSPLLLA---GVFYLVIT 216 >gi|300722325|ref|YP_003711610.1| glutamate/aspartate ABC transporter membrane protein [Xenorhabdus nematophila ATCC 19061] gi|297628827|emb|CBJ89405.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Xenorhabdus nematophila ATCC 19061] Length = 224 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 108/188 (57%), Gaps = 11/188 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 +++W + II S P LL +V+TL I I+ ++ +I G +A++R+ S ++S Y Sbjct: 3 QFDWSS-IIPSMP-LLLNGLVITLKITGIAVIVGIIWGTVLAMMRLS-SIKVVSWFATLY 59 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-----GIVFDS---FVAIIISLTLNFSAYISEIIRSS 113 V +FR PL++ L + +P++ GI + ++ +++ +L +AY SEIIR+ Sbjct: 60 VNLFRSVPLVMVLLWFYLIVPNLLQNVLGISPQTDIRLISAMVAFSLFEAAYYSEIIRAG 119 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I S+ +GQ AS A+G+T Q++R +ILPQ L ++ I + + TS+ +++ + Sbjct: 120 IQSVSRGQSSASLALGMTHMQSMRLVILPQAFRAMTPLLLTQGIVLFQDTSLVYVLSLAD 179 Query: 174 IFQTAQRI 181 F+TA I Sbjct: 180 FFRTATNI 187 >gi|227514604|ref|ZP_03944653.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum ATCC 14931] gi|227087015|gb|EEI22327.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum ATCC 14931] Length = 223 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 123/215 (57%), Gaps = 20/215 (9%) Query: 1 MKYEWFNLIID--SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 M + N++++ +F +L+ + V++ IA +S LI+G V+R S ++ I+ Sbjct: 1 MAHSGINVLLEGSNFSRLM-GGLWVSVWIAVVSLFFGLIVGTVFGVLRTTKSR-VLRFIL 58 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 Y+ IFR P +V LF+++Y LP HI + D +++ +L +A S+I+R +I Sbjct: 59 RLYLEIFRIIPTVVLLFLVYYILPRQLHINMPADWMA--VLAFSLWVAAEFSDIVRGAIQ 116 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITT---SAVPLSSEFISILKSTSVASTITIP 172 S+P+ Q ++ AIGLTR Q R+I+LPQ + +A+ L++ ++K+TS+ I+I Sbjct: 117 SVPRHQRESGLAIGLTRFQLFRYILLPQAMKLEVPAAINLATR---VVKTTSLLMIISIM 173 Query: 173 EIFQTAQRIV---STTYQPLI--IYCELAFVYLIL 202 ++ Q+I+ ++TY + +Y + F+Y I+ Sbjct: 174 DVINVGQQIIEANNSTYPTGVFWVYGLIFFLYFII 208 >gi|207856868|ref|YP_002243519.1| ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206708671|emb|CAR32997.1| putative ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 215 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 99/186 (53%), Gaps = 1/186 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L I TL + F+ + + G +AV+R S + I+ V+I RG P+L+ +F+ Sbjct: 13 LLEGIGNTLLVTFTCFLSAFLFGLTVAVLR-RLSPLPLQKILDVLVFILRGIPILIAVFL 71 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GLP IGI VA+ +S+ L +Y++E+ R ++ + + + G+ + Q I Sbjct: 72 VYFGLPSIGIYVSPLVAMNLSVGLISGSYLAEVFRGALKLVEPYEITVAKVAGMRQLQVI 131 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +I LPQ + S + +EF S+LK+T A T+ I EI + A + + T L IY Sbjct: 132 INIELPQMLRFSVPGIINEFSSVLKATPFAYTVGIAEITKQAMSLTAITLNGLQIYTLDG 191 Query: 197 FVYLIL 202 +Y I+ Sbjct: 192 VLYFII 197 >gi|78062381|ref|YP_372289.1| amino acid ABC transporter inner membrane protein [Burkholderia sp. 383] gi|77970266|gb|ABB11645.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter ATP-binding protein, PAAT family [Burkholderia sp. 383] Length = 619 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 121/232 (52%), Gaps = 30/232 (12%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EWF S P L + + TL + + V L++G F+A+ R+ S ++S +VW Sbjct: 90 EWFL----SPPVL--SGLARTLVLTLLGAVSGLVLGAFVALARLSRS-RLLSASAWTFVW 142 Query: 64 IFRGTPLLVQLFV----------IFYGLPHIGIV-FDS--------FVAIIISLTLNFSA 104 +FR PL+V L + + G+P IV FD+ F+A ++ LTL+ +A Sbjct: 143 LFRSIPLIVLLLILNNLGYLYEHVRLGVPFTDIVWFDTPTTDLISPFLAAVLGLTLHHAA 202 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 + +E+IR I+++ +GQ +A+ A+GL R + I+LPQ + ++ I + K TS Sbjct: 203 FSAEVIRGGILAVDQGQLEAAAALGLPRGRQTTRIVLPQAMRAILPTAFNDLIMLAKGTS 262 Query: 165 VASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 + + +PE+F T Q I + PL++ + YLI+ + IQ+++E Sbjct: 263 MVYVLAMPELFYTVQVIYRRNLEVIPLLMVATV--WYLIILTVLSAIQVQVE 312 >gi|17546978|ref|NP_520380.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum GMI1000] gi|17429279|emb|CAD15966.1| probable amino acid transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 230 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 96/165 (58%), Gaps = 7/165 (4%) Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V++ RGTPLL+ +F ++ LP + G D F ++ +L + +AY++EI+R+ I ++P+G Sbjct: 65 VYVVRGTPLLMVIFWAYFLLPTLTGQRTDQFNTMLTALVVFDAAYLAEIVRAGIQALPRG 124 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQ 179 Q +++ ++GL Q +R ++LPQ + L ++ +S +K TS+ I++PE+ F Q Sbjct: 125 QMESARSLGLPYLQAMRLVLLPQALRNMLPSLVNQLVSTIKETSLGYIISLPEVSFVAGQ 184 Query: 180 RIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIES-SVTQ 219 S Q +Y LA Y LT ++++ ++ + ++TQ Sbjct: 185 ISTSVMTQSAEVYGLLALSYFAMCFGLTRVAFLLERRLAARALTQ 229 >gi|330988844|gb|EGH86947.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008159|gb|EGH88216.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 324 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 24/215 (11%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY----------G 80 S V S+I+G +A+ R+ S + +L Y+W FR P L+ L +++ G Sbjct: 94 STVFSIILGTALALARLSGSPLLAALAWG-YIWFFRSMPALLVLIILYNFAYLYDHILLG 152 Query: 81 LPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +P +VF F ++ L+L +AY +EIIR +I + GQ +A+ A+GL Sbjct: 153 VPFTDLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAALGLP 212 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PL 189 + + IILPQ + + +E I ++K TS+ + +PE+F T Q I + T PL Sbjct: 213 ASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPL 272 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 +I + YLI+T+ Q +E + T V Sbjct: 273 LIVATV--WYLIITTLLTSAQYYVERHFARGTARV 305 >gi|323697541|ref|ZP_08109453.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323457473|gb|EGB13338.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 246 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 114/228 (50%), Gaps = 39/228 (17%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWIFRGTPLLV 72 + ++ T+ I+ IS V ++I+G I ++R+ F SL Y FR TPLL+ Sbjct: 8 RWMWEGFCTTMQISTISLVSAMILGIIICILRMTPFKPFQWFSLA---YTEFFRNTPLLI 64 Query: 73 QLFVIFYG----LPHI--------------------------GIVFD-SFVAIIISLTLN 101 Q+F + G +P + ++F+ F+ II+LT+ Sbjct: 65 QIFFWYNGAHVIIPEVINQWMNDLYYWFPGPFSLFGHQFVGEWVLFNVEFIMSIIALTVY 124 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 SA+I+E IR+ I SIPK Q +AS A+GL+ Q R++ILPQ + PL S+ ++++K Sbjct: 125 TSAFIAEEIRAGIFSIPKNQLEASRAVGLSFLQGYRYVILPQALRIVIPPLISQALNLIK 184 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL---ILTSFC 206 ++S+ + + ++ A +I S P + +YL ++ SFC Sbjct: 185 NSSLVMVLGVTDLMYQATQIESYHAMPFEAFTVALLIYLAISLVVSFC 232 >gi|257056748|ref|YP_003134580.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] gi|256586620|gb|ACU97753.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] Length = 215 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 105/186 (56%), Gaps = 2/186 (1%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 S + SL++G +A++R+ I+ YV +FR TPL + F + P + +V S Sbjct: 25 SAIGSLVLGTILAMLRVS-PVPILRAAGAAYVTLFRNTPLTLLFFFFVFAFPLLDVVELS 83 Query: 91 -FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 F A +++LT+ +A++ E++RS I ++P GQ +A+ AIGLT QT+ HI+LPQ + Sbjct: 84 YFWAAVVALTMYTAAFVCEVVRSGINTVPVGQAEAARAIGLTFGQTLSHIVLPQATRSVV 143 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYII 209 P+ S I++LK+T++A+ ++ E + Y L+ +A ++IL + ++ Sbjct: 144 PPMVSTMIALLKNTTIAAGFSVVEAGAIQNYLSERGYSVLVGLLWVALGFVILITPMTLL 203 Query: 210 QIKIES 215 Q +E Sbjct: 204 QRSLEK 209 >gi|78779550|ref|YP_397662.1| amino acid ABC transporter permease [Prochlorococcus marinus str. MIT 9312] gi|78713049|gb|ABB50226.1| amino acid ABC transporter membrane protein 1, PAAT family [Prochlorococcus marinus str. MIT 9312] Length = 297 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/231 (25%), Positives = 114/231 (49%), Gaps = 29/231 (12%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 DS+ L+ + +L + S V++ IG I +R+ ++ +I Y+ + R TPL Sbjct: 63 DSYAWALFMGWMNSLKVIISSLVLASFIGTLIGFLRVG-KNSFFRIITAGYITVIRQTPL 121 Query: 71 LVQLFVIFY-----------------------GLPHIGIVFDS-FVAIIISLTLNFSAYI 106 L+QL ++ G+ G+ S F A++ L++ SA+I Sbjct: 122 LIQLMCWYFVGFLSIRNNSFLNLSNVVNISNKGIELFGLNLSSEFSALLFGLSIFSSAFI 181 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +E+IR I S+P GQW+A ++G++ KQ II+PQ + L+S+++++ K++++A Sbjct: 182 AEVIRGGIQSVPVGQWEAFRSLGISEKQGFIKIIIPQALPAFIPGLTSQYLNLAKNSTLA 241 Query: 167 STITIPEIFQTAQRIVSTTYQP----LIIYCELAFVYLILTSFCYIIQIKI 213 I +I+ I++ T + +I+ C + L++T II I Sbjct: 242 IAIGYADIYAINDTIINQTGRAVECFMILLCSFLILNLVITKVMGIIDKSI 292 >gi|26991171|ref|NP_746596.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida KT2440] gi|148546670|ref|YP_001266772.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida F1] gi|24986216|gb|AAN70060.1|AE016645_6 basic amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] gi|148510728|gb|ABQ77588.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida F1] gi|313497724|gb|ADR59090.1| Polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida BIRD-1] Length = 229 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 100/194 (51%), Gaps = 13/194 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 +TL +A S +++++G +R+ ++ + Y + RG P LV + +IFYG Sbjct: 15 LTLQLALSSMALAIVLGLIGVALRLS-PVRWLAWLGDLYSTVIRGIPDLVLILLIFYGGQ 73 Query: 81 ------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P +G I + +A I +L F AY+SE R + + IPKGQ +A A G+ Sbjct: 74 DIINRVAPLLGYEDYIDLNPLIAGIGTLGFIFGAYLSETFRGAFLGIPKGQAEAGVAYGM 133 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + +Q I +PQ I + ++ ++ + K+T++ S + + ++ A++ T +P Sbjct: 134 SPRQVFFRIQVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATREPFT 193 Query: 191 IYCELAFVYLILTS 204 + +A +YL+LTS Sbjct: 194 FFLAVAALYLVLTS 207 >gi|204927943|ref|ZP_03219144.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323285|gb|EDZ08481.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 215 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 98/186 (52%), Gaps = 1/186 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L I TL + F+ + G +AV+R S + I+ V+I RG P+L+ +F+ Sbjct: 13 LLEGIGNTLLVTFTCFLSAFFTGLTVAVLR-RLSPLPLQKILDVLVFILRGIPILIAVFL 71 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GLP IGI VA+ +S+ L +Y++E+ R ++ + + + G+ + Q I Sbjct: 72 VYFGLPSIGIYVSPLVAMNLSVGLISGSYLAEVFRGALKLVEPFEITVAKVAGMRQLQVI 131 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +I LPQ + S + +EF S+LK+T A T+ I EI + A + + T L IY Sbjct: 132 VNIELPQMLRFSVPGIINEFSSVLKATPFAYTVGIAEITKQAMSLTAITLNGLQIYTLAG 191 Query: 197 FVYLIL 202 +Y I+ Sbjct: 192 VLYFII 197 >gi|293602702|ref|ZP_06685143.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292818893|gb|EFF77933.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 229 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 108/206 (52%), Gaps = 10/206 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I + P L + TL + ++ V+ L +G +A++R+ I+S+ YV + Sbjct: 6 FDVIWTALPYLFQTGMTFTLTLTALAAVMGLALGTLLAMMRLS-RFKILSVPAGIYVNVM 64 Query: 66 RGTPLLVQLFVIFYGLPHIG---------IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 R PLL+ +F ++ +P+I + +F + +I+ T+ +AY EI+R+ I S Sbjct: 65 RSIPLLLVIFWFYFLVPYIAAWVVGSPTPLRVGAFNSAVITFTMFEAAYFCEIMRAGIQS 124 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ AS AIGLT Q +R+++LPQ L + I + + TS+ +++ + Sbjct: 125 IARGQVSASMAIGLTPWQGMRYVVLPQAFRNMVPALLTRVIILFQDTSLVYVLSLTDFLG 184 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLIL 202 A +I + + +Y +A VY ++ Sbjct: 185 AASKIGQRDGRLVELYLFVAVVYFVI 210 >gi|242237974|ref|YP_002986155.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242130031|gb|ACS84333.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 306 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 24/206 (11%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY----------GLPHI 84 S+I+G +A+ R+ S ++ + Y+W+FR PL++ L +++ G+P Sbjct: 82 SIIVGTGLALARLS-SSWLLRTLAWLYIWLFRSLPLILVLIILYNFSYLYDTLSLGIPFT 140 Query: 85 GI---------VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 GI V F +I LTL SAY +EIIR I+ + GQ++A+ A+GL + Sbjct: 141 GITILSASTIDVLGPFSVAVIGLTLVQSAYTAEIIRGGILGVDAGQFEAAAALGLPGYRR 200 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYC 193 IILPQ + +E IS+ K TSV + +PE+F T Q I + T Q PL++ Sbjct: 201 TWRIILPQALRAILPTGFNEIISLAKGTSVVYVLALPELFYTVQVIYNRTQQVIPLLMVA 260 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQ 219 L YL +TS ++Q +E V + Sbjct: 261 TL--WYLAITSVLSVLQYHVERYVAR 284 >gi|188583629|ref|YP_001927074.1| polar amino acid ABC transporter inner hypothetical protein [Methylobacterium populi BJ001] gi|179347127|gb|ACB82539.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium populi BJ001] Length = 230 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 109/205 (53%), Gaps = 16/205 (7%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH---FYVW 63 ++I D+ P L +V TL + ++ L++G +A++R+ + + + H YV Sbjct: 8 SVIRDALPYLFAQGMVFTLTLTALAASGGLVLGTGLALLRL----SGVPGLTHAAKLYVE 63 Query: 64 IFRGTPLLVQLFVIFYGLPHIG---------IVFDSFVAIIISLTLNFSAYISEIIRSSI 114 + R PL++ +F ++ +P++G I +F + +I+ TL +AY SEI+R+ I Sbjct: 64 LMRALPLVLVIFWFYFLVPYLGAWAIGSDTPIQVGAFASALITFTLFEAAYFSEIVRAGI 123 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 SIP+GQ A+ A+G++ Q +R ++LPQ + L ++ I + + TS+ +++ + Sbjct: 124 QSIPEGQGAAARALGMSPAQAMRLVVLPQAMRNMLPLLLTQTIVLFQDTSLVYVLSLTDF 183 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVY 199 A ++ + + +Y A VY Sbjct: 184 LGAASKVAQRDGRLVEMYLFAALVY 208 >gi|84496803|ref|ZP_00995657.1| putative glutamate transporter permease protein [Janibacter sp. HTCC2649] gi|84383571|gb|EAP99452.1| putative glutamate transporter permease protein [Janibacter sp. HTCC2649] Length = 295 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 10/203 (4%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFYVWIFRGTPLLVQLFVIFYGL 81 TL A IS V++ G + R+ TI I + V FR P+L+ + + +GL Sbjct: 73 TLKAAAISIVLAGTFGLIFGIGRL---STIAPIRWLCGAVVEFFRSVPVLI-MMIFAFGL 128 Query: 82 PHIGIVFDS----FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 VF S A+I +LTL A I+E++RS + S+PKGQ +A A+GLT Q +R Sbjct: 129 YAQNSVFASDINPLAAVITALTLYNGAVIAELVRSGVYSLPKGQGEAGLAVGLTTGQVLR 188 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 I LPQ +T L +F+++LK +++ IT E+ + + S + Y +A Sbjct: 189 SIQLPQALTAMLPALIGQFVTVLKDSALGYQITYSELLSGGKILGSNFANTVPAYIVVAI 248 Query: 198 VYLILTSFCYIIQIKIESSVTQH 220 V++++ + I +E +++ Sbjct: 249 VFILINYSLSRLAIYVEHRLSRR 271 >gi|163868658|ref|YP_001609867.1| glutamate/aspartate transport system permease protein GltJ [Bartonella tribocorum CIP 105476] gi|161018314|emb|CAK01872.1| glutamate/aspartate transport system permease protein GltJ [Bartonella tribocorum CIP 105476] Length = 250 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 97/181 (53%), Gaps = 15/181 (8%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH--- 59 + + + ++D F T+ ++ S ++++ G I +R +II+ + Sbjct: 27 HTYLDTLLDGFKN--------TVILSITSLILAIFCGVIIGTMRTLPKTSIINCVCRTLG 78 Query: 60 -FYVWIFRGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 +V I R PLLVQ+F+ ++ +P I + F + I +L SA I+E +RS I Sbjct: 79 ALWVEIMRNIPLLVQVFLWYFVVPKIYPPAMKFSPILLITCALGFFTSARIAEQVRSGIE 138 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +I GQ A+ A+G T Q+ R+IILP+ I PL+SE + I+K++S+A ++I E+ Sbjct: 139 AISSGQRYAAMAMGFTTYQSYRYIILPRAIRAIMPPLTSEAMGIVKNSSIAFAVSINELM 198 Query: 176 Q 176 Q Sbjct: 199 Q 199 >gi|332365845|gb|EGJ43602.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK355] Length = 236 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 88/149 (59%), Gaps = 10/149 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-----IGIVFDSF---VAIIISLTLNFSAYISEIIRS 112 Y++I R TP +V LF++FYG+P +G+ +++ V +II++ L F+A I+E+ ++ Sbjct: 65 YIFILRCTPPIVLLFLVFYGIPEFLEWWLGLDINNWSRTVFVIITMILLFAAMIAEVFKA 124 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +++PKGQ +A +IGLT QT I+LPQ + L++ +++++ ++A TI Sbjct: 125 AYLAVPKGQTEAGLSIGLTPVQTFLRIVLPQAFRIALPNLTTALLNLMRDAALAYTIGAV 184 Query: 173 EIFQTAQRIVSTTYQ--PLIIYCELAFVY 199 ++ Q ++S L Y +A +Y Sbjct: 185 DVMGAGQNLISRNLGNYSLETYTAVALIY 213 >gi|331017120|gb|EGH97176.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 159 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 91/159 (57%), Gaps = 11/159 (6%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + +II P+L A +TL + I+ + LI+ + + R + +L + Y++ F Sbjct: 3 WEVIIKWLPRLAQGA-TLTLELVAIAVIAGLILAIPMGIARASRHWPVRAL-PYAYIFFF 60 Query: 66 RGTPLLVQLFVIFYGLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIIS 116 RGTPLLVQLF+++YGL V D F ++++TL+ +AYI+EI+R +I + Sbjct: 61 RGTPLLVQLFLVYYGLAQFDAVRQGPLWPYLRDPFWCAVVTMTLHTAAYIAEILRGAIQA 120 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSE 155 +P G+ +A+ A+G+++ + + +I+LP+ S+E Sbjct: 121 VPVGEVEAARALGMSKWKALFYIVLPRAARIGLPAYSNE 159 >gi|308234142|ref|ZP_07664879.1| amino acid ABC transporter membrane protein 2, PAAT family [Atopobium vaginae DSM 15829] gi|328943633|ref|ZP_08241098.1| hypothetical protein HMPREF0091_10323 [Atopobium vaginae DSM 15829] gi|327491602|gb|EGF23376.1| hypothetical protein HMPREF0091_10323 [Atopobium vaginae DSM 15829] Length = 287 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 82/137 (59%), Gaps = 2/137 (1%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRG P L+ ++ F +P GI SF I + + +A ++E+ RS + ++ KGQ +A Sbjct: 117 FRGVPSLLLIYFCFLVIPQYGIKMPSFWMIALPVACAAAAVLAEVFRSGVHAVAKGQKEA 176 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 +YA+G TR Q ++ ++LPQ I L ++ + ++K T+VA ++ P++ Q A R++ T Sbjct: 177 AYALGFTRAQVLQKVVLPQAIRYVIPALIAQLVVVVKDTTVAYVVSYPDLLQNA-RVLIT 235 Query: 185 TYQPLI-IYCELAFVYL 200 Y L+ +Y +A +Y+ Sbjct: 236 NYDALVSVYLIVALIYI 252 >gi|83717832|ref|YP_439605.1| histidine ABC transporter permease [Burkholderia thailandensis E264] gi|167616164|ref|ZP_02384799.1| histidine transport system permease protein [Burkholderia thailandensis Bt4] gi|83651657|gb|ABC35721.1| histidine ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 237 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 95/183 (51%), Gaps = 13/183 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+S+ +GF +AV + + +S + Y ++FRGTPL VQL + + G+ + +V D Sbjct: 31 VVSIGLGFGLAVPLAVARASRNRAVSGAVWLYTYVFRGTPLYVQLLLCYTGIYSLSVVHD 90 Query: 90 ----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + +++ TLN AY +EI +I S G+ +A A G++R + + Sbjct: 91 HAWLDSFFRSAMNCTLLAFTLNECAYATEIFAGAIKSTAPGEIEAGLAYGMSRFKLYTRV 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILP + + S+E I +L +T++A T T+P+I + + + S TY Y A +Y Sbjct: 151 ILPSALRRALPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYASFQAYGIAAALY 210 Query: 200 LIL 202 ++ Sbjct: 211 ALI 213 >gi|153835217|ref|ZP_01987884.1| general L-amino acid transport system permease protein AapM [Vibrio harveyi HY01] gi|148868283|gb|EDL67415.1| general L-amino acid transport system permease protein AapM [Vibrio harveyi HY01] Length = 365 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 105/195 (53%), Gaps = 8/195 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFV 76 + ++VTL IA + V+SL IG +A+ R SD II I Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVALALGR--RSDMPIIRSICTVYIEVWRGVPLITVLFM 212 Query: 77 IFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G D + +I + + +AY++E++R + +IPKGQ++A+ A+GL+ Sbjct: 213 ASVMLPLFLAEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYW 272 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + + IILPQ + + + + FI + K TS+ I + ++ Q +T + L Sbjct: 273 KKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPEWLGFAT 331 Query: 194 E-LAFVYLILTSFCY 207 E FV L+ FC+ Sbjct: 332 ESYVFVALVFWVFCF 346 >gi|107026979|ref|YP_624490.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116691824|ref|YP_837357.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|105896353|gb|ABF79517.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia cenocepacia AU 1054] gi|116649824|gb|ABK10464.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia cenocepacia HI2424] Length = 237 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 94/182 (51%), Gaps = 13/182 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+S+ +GF +AV I S+ IS + Y ++FRGTPL VQL + + G+ + +V D Sbjct: 31 VVSIALGFALAVPLAIARASSNRWISGPVWLYTYVFRGTPLYVQLLMCYTGIYSLQVVHD 90 Query: 90 ----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + +++ LN AY +EI +I + G+ +A A G++R + I Sbjct: 91 HVLLDTFFRNAMNCTLLAFVLNECAYATEIFAGAIKATSAGEIEAGMAYGMSRFKLYTRI 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LP + S S+E I +L +T++A T T+P+I + + + S TY Y A +Y Sbjct: 151 VLPSALRRSLPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYMSFQAYGIAAVLY 210 Query: 200 LI 201 + Sbjct: 211 AV 212 >gi|330883383|gb|EGH17532.1| amino acid ABC transporter protein, permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 167 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/119 (39%), Positives = 69/119 (57%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 TI+ + Y+ FR TPL+VQL+V+F+ LP GI F + +I L ++AYI+E R Sbjct: 49 TIVHRLSKGYLSFFRNTPLMVQLYVLFFALPLAGITFPAITTGVIGLGCYYAAYIAEAYR 108 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +I IP GQW+A+ A+ +R T R IILPQ + L + I + K T + + IT Sbjct: 109 GAIDDIPAGQWEAARALDFSRGDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVIT 167 >gi|296110572|ref|YP_003620953.1| ABC transporter amino acid permease protein [Leuconostoc kimchii IMSNU 11154] gi|295832103|gb|ADG39984.1| ABC transporter amino acid permease protein [Leuconostoc kimchii IMSNU 11154] Length = 222 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/205 (28%), Positives = 106/205 (51%), Gaps = 6/205 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++W + FP LL A+ +TL +A ++SLI+G I+ + + S + Sbjct: 1 MTFDW-HYFFHVFP-LLIKALPLTLYLAVGIVIVSLIVGGVISYLGLQ-SFKPLRWFASV 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVA---IIISLTLNFSAYISEIIRSSIISI 117 YV FR P +VQ+F+ +YGLP + + II +L ++AY++E RS+I S+ Sbjct: 58 YVSGFRAVPAVVQIFLAYYGLPELIPALKTVSPQTIIIFALGFKYAAYMAETFRSAIHSV 117 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 GQ +A+ A+ + + Q + ++ PQ + + + I ILK TS+ I + E+F Sbjct: 118 DYGQQEAAKALHIKQSQYVLRVLWPQAAVNALPTVGNYIIGILKETSLVFVIGVSEMFGE 177 Query: 178 AQRIVSTTYQPLIIYCELAFVYLIL 202 + + +++ L +Y + +Y L Sbjct: 178 GKLLAGASFKYLEVYVAVGLIYWAL 202 >gi|289177408|gb|ADC84654.1| Transporter [Bifidobacterium animalis subsp. lactis BB-12] Length = 253 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/142 (28%), Positives = 83/142 (58%), Gaps = 3/142 (2%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRS 112 ++ I Y+ + R TPLLVQL+ +++GLP +G V+ + + I+ L +Y++E +R+ Sbjct: 84 VLRQITTVYIEVSRNTPLLVQLYFLYFGLPKMGFVWSAELCAIVGLGFLGGSYMAESMRA 143 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + S+P+ Q + +Y +G QT+ +I+PQ ++ S + + I ++K +SV S I + Sbjct: 144 GLQSVPQIQRENAYMLGFNTWQTLTRVIVPQAVSISTPGIVANVIFLIKESSVVSAIALA 203 Query: 173 EIFQTAQRIVS---TTYQPLII 191 ++ A+ ++ TY+ L + Sbjct: 204 DVMYMAKDLMGMYYNTYEALFM 225 >gi|168230054|ref|ZP_02655112.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205335296|gb|EDZ22060.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 215 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 99/186 (53%), Gaps = 1/186 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L I TL + F+ + + G +AV+R S + ++ V+I RG P+L+ +F+ Sbjct: 13 LLEGIGNTLLVTFTCFLSAFLTGLTVAVLR-RLSPLPLQKMLDVLVFILRGIPILIAVFL 71 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GLP IGI VA+ +S+ L +Y++E+ R ++ + + + G+ + Q I Sbjct: 72 VYFGLPSIGIYVSPLVAMNLSVGLISGSYLAEVFRGALKLVEPYEITVAKVAGMRQLQVI 131 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +I LPQ + S + +EF S+LK+T A T+ I EI + A + + T L IY Sbjct: 132 INIELPQMLRFSVPGIINEFSSVLKATPFAYTVGIAEITKQAMSLTAITLNGLQIYTLAG 191 Query: 197 FVYLIL 202 +Y I+ Sbjct: 192 VLYFII 197 >gi|313110215|ref|ZP_07796112.1| putative amino acid ABC transporter, permease protein [Pseudomonas aeruginosa 39016] gi|310882614|gb|EFQ41208.1| putative amino acid ABC transporter, permease protein [Pseudomonas aeruginosa 39016] Length = 231 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 11/154 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIGIVFDS-------FVAIIISLTLNFSAYISEI 109 Y I RG P + + +I++G L +G +F F A ++L L F AY +E+ Sbjct: 55 YTTIVRGVPETLWVLMIYFGTVSGLNALGDLFGKPDLALSPFAAGTLALGLCFGAYATEV 114 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +++S P+G +A A+GL+ + I+LPQ + L + ++ +LK T++ S I Sbjct: 115 FRGALLSFPRGHREAGQALGLSPGRIFWRIVLPQIWRVALPGLGNLYLILLKDTALVSLI 174 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 T+ EI + AQ + T +P Y A +YL LT Sbjct: 175 TLDEIMRKAQVASNATKEPFTFYMTAAAIYLSLT 208 >gi|144899135|emb|CAM75999.1| binding-protein-dependent transport system inner membrane component [Magnetospirillum gryphiswaldense MSR-1] Length = 394 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 68/98 (69%) Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 F A++ LT+ +++I+EI+RS I+++P GQ +A+ ++GL+R +T+R ++LPQ + Sbjct: 262 EFAALLAGLTVYTASFIAEIVRSGILAVPHGQTEAALSLGLSRAKTLRLVVLPQALRVIV 321 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 PL+S+++++LK++S+A I P++ A ++ T Q Sbjct: 322 PPLTSQYLNLLKNSSLAVAIGYPDLVSVANTAINQTGQ 359 Score = 38.9 bits (89), Expect = 0.57, Method: Compositional matrix adjust. Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 12/116 (10%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D++ + L ++ TL +A + ++ ++G + + R+ + +++ + FYV R PL Sbjct: 81 DTYLRALVVGVLNTLKVAVLGIALASLLGLVVGIARLS-RNWLVARLATFYVETVRNVPL 139 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 L+QLFV +YG + + +L L +IS R + +P +W SY Sbjct: 140 LLQLFV-WYG------IVTALPGPRQALDLGLGVFISN--RGLKVPVP--EWHDSY 184 >gi|254254090|ref|ZP_04947407.1| ABC-type polar amino acid transport system ATPase component [Burkholderia dolosa AUO158] gi|124898735|gb|EAY70578.1| ABC-type polar amino acid transport system ATPase component [Burkholderia dolosa AUO158] Length = 590 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 123/233 (52%), Gaps = 32/233 (13%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EWF S P L + + TL + + V+ +G +A+ R+ S +++ +VW Sbjct: 68 EWFL----SPPVL--SGLARTLVLTLLGAVLGFALGALVALARLSRS-RLLAASAWTFVW 120 Query: 64 IFRGTPLLVQLFV----------IFYGLPHIGIV-FDS--------FVAIIISLTLNFSA 104 +FR PL+V L + + G+P IV FD+ F+A ++ LTLN +A Sbjct: 121 LFRSIPLIVLLLILNNLGYLYEHVRLGVPFTDIVWFDAPTTELISPFLAAVLGLTLNHAA 180 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS-SEFISILKST 163 + +E+IR I+S+ +GQ +A+ A+GL R + I+LPQ + + +P + ++ I++ K T Sbjct: 181 FSAEVIRGGILSVDQGQLEAAAALGLPRSRQTTRIVLPQAM-RAILPTAFNDLITLAKGT 239 Query: 164 SVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 S+ + +PE+F T Q I + PL++ YLI+ + IQ+++E Sbjct: 240 SMVYVLAMPELFYTVQVIYRRNLEVIPLLMVA--TAWYLIILTVLSAIQVQVE 290 >gi|322376912|ref|ZP_08051405.1| amino acid ABC transporter, permease protein [Streptococcus sp. M334] gi|321282719|gb|EFX59726.1| amino acid ABC transporter, permease protein [Streptococcus sp. M334] gi|327389646|gb|EGE87991.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA04375] Length = 266 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 113/223 (50%), Gaps = 28/223 (12%) Query: 9 IIDSFP---QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + D P Q L I++T+ A V++L+ A+++I I+ + F+V Sbjct: 30 VFDGIPRIVQQLPTTIMLTIGGALFGLVLALLF----AIVKIN-RVKILYPLQAFFVSFL 84 Query: 66 RGTPLLVQLFVIFYGLP----------HIGIVFDSF---VAIIISLTLNFSAYISEIIRS 112 +GTP+LVQL + +YG+P G+ ++ V I++ N +AY SE IR+ Sbjct: 85 KGTPILVQLMLTYYGIPLALKALNQQWGTGLNINAIPAAVFAIVAFAFNEAAYASETIRA 144 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I+S+ G+ +A+ ++G+TR Q R +I+P + L + I + K TS+A + + Sbjct: 145 AILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKGTSLAFSAGVV 204 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 E+F AQ + Y+ + +A VY +++ I IES Sbjct: 205 EVFAQAQILGGADYRYFERFISVALVY-------WVVNIGIES 240 >gi|324989769|gb|EGC21712.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK353] gi|324992503|gb|EGC24424.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK405] gi|324995967|gb|EGC27878.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK678] gi|325697413|gb|EGD39299.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK160] gi|327460727|gb|EGF07062.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1] gi|327488811|gb|EGF20610.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1058] Length = 230 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 88/149 (59%), Gaps = 10/149 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-----IGIVFDSF---VAIIISLTLNFSAYISEIIRS 112 Y++I R TP +V LF++FYG+P +G+ +++ V +II++ L F+A I+E+ ++ Sbjct: 59 YIFILRCTPPIVLLFLVFYGIPEFLEWWLGLDINNWSRTVFVIITMILLFAAMIAEVFKA 118 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +++PKGQ +A +IGLT QT I+LPQ + L++ +++++ ++A TI Sbjct: 119 AYLAVPKGQTEAGLSIGLTPLQTFLRIVLPQAFRIALPNLTTALLNLMRDAALAYTIGAV 178 Query: 173 EIFQTAQRIVSTTYQ--PLIIYCELAFVY 199 ++ Q ++S L Y +A +Y Sbjct: 179 DVMGAGQNLISRNLGNYSLETYTAVALIY 207 >gi|210630270|ref|ZP_03296360.1| hypothetical protein COLSTE_00244 [Collinsella stercoris DSM 13279] gi|210160596|gb|EEA91567.1| hypothetical protein COLSTE_00244 [Collinsella stercoris DSM 13279] Length = 290 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/191 (28%), Positives = 103/191 (53%), Gaps = 9/191 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMHFYVWIFRGTPLLVQ 73 L A + TL +A + I+L++G + + R I + + ++ F FRG P L+ Sbjct: 78 LMAGLRGTLTVALTAGAIALVLGLALMLGRTSGIRWLAALCRVVTDF----FRGVPSLLL 133 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 ++ F +P GI SF I + + L S ++E+ R+ + ++P+GQ +A+ A+G+ Sbjct: 134 IYFFFLVVPQYGIRMSSFWMITLPVALAASGVLAEVFRAGMNAVPRGQTEAALALGMRPF 193 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI-IY 192 + I+LPQ I L S+ + ++K T+VA ++ P++ Q A R++ T Y L+ Y Sbjct: 194 RVKLKIVLPQAIRYVIPSLISQLVVVVKDTTVAYVVSYPDMLQNA-RVLITNYDALVSTY 252 Query: 193 CELAFVYLILT 203 +A +Y++L Sbjct: 253 LVVAVIYILLN 263 >gi|156974645|ref|YP_001445552.1| hypothetical protein VIBHAR_02363 [Vibrio harveyi ATCC BAA-1116] gi|156526239|gb|ABU71325.1| hypothetical protein VIBHAR_02363 [Vibrio harveyi ATCC BAA-1116] Length = 365 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 105/195 (53%), Gaps = 8/195 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFV 76 + ++VTL IA + V+SL IG +A+ R SD II I Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVALALGR--RSDMPIIRSICTVYIEVWRGVPLITVLFM 212 Query: 77 IFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G D + +I + + +AY++E++R + +IPKGQ++A+ A+GL+ Sbjct: 213 ASVMLPLFLAEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYW 272 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + + IILPQ + + + + FI + K TS+ I + ++ Q +T + L Sbjct: 273 KKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPEWLGFAT 331 Query: 194 E-LAFVYLILTSFCY 207 E FV L+ FC+ Sbjct: 332 ESYVFVALVFWVFCF 346 >gi|325690798|gb|EGD32799.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK115] gi|327463112|gb|EGF09433.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1] Length = 219 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 64/196 (32%), Positives = 109/196 (55%), Gaps = 15/196 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I+ IS V+S + G +AV+R + ++ LI Y+ R P L+ +F IF Sbjct: 22 LTLQISFISIVLSTVFGTILAVMR-NGKNKLLKLIASIYIEFVRNVPNLLWIFTIF---- 76 Query: 83 HIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 +VF S A IIS T+ SA ++EIIR + +I GQ +A + G T+ Q +R+II Sbjct: 77 ---LVFQIKSTPAGIISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRYII 133 Query: 141 LPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 LPQ I + S+F++++K TS+ S I + E+F +AQ ++ ++ ++ +Y Sbjct: 134 LPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFA----LY 189 Query: 200 LILTSFCYIIQIKIES 215 L++ + ++I I S Sbjct: 190 LLVAAIYFLINFAISS 205 >gi|115352502|ref|YP_774341.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria AMMD] gi|172061359|ref|YP_001809011.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria MC40-6] gi|115282490|gb|ABI88007.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia ambifaria AMMD] gi|171993876|gb|ACB64795.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 237 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 102/195 (52%), Gaps = 13/195 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL + +S + + +AV R+ +S + Y ++FRGTPL VQL + + Sbjct: 22 GVAITLWLLVVSIGLGFCLSVPLAVARVS-KRKWLSGAVWLYTYVFRGTPLYVQLLLCYT 80 Query: 80 GL---------PHIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 GL P + F D +++ TLN AY +EI +I + G+ +A+ A G Sbjct: 81 GLYSLQFIRGTPLLDSFFRDGMRCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYG 140 Query: 130 LTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 ++ R +ILP + A+PL S+E I +L +T+VA T T+P+I + A+ + S TY Sbjct: 141 MSTFTMYRRVILPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMS 199 Query: 189 LIIYCELAFVYLILT 203 + A +YL+++ Sbjct: 200 FHAFGIAALLYLVIS 214 >gi|115360208|ref|YP_777346.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria AMMD] gi|172062640|ref|YP_001810291.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|115285496|gb|ABI91012.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia ambifaria AMMD] gi|171995157|gb|ACB66075.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 237 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 13/183 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+S+ GF +AV I S+ IS + Y ++FRGTPL VQL + + G+ + +V D Sbjct: 31 VVSIAFGFALAVPLAIARASSNRWISGPVWLYTYVFRGTPLYVQLLMCYTGIYSLQVVHD 90 Query: 90 ----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + +++ LN AY +EI +I + G+ +A A G++R + I Sbjct: 91 HVLLDTFFRNAMNCTLLAFVLNECAYATEIFAGAIKATSAGEIEAGMAYGMSRFKLYTRI 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILP + S S+E I +L +T++A T T+P+I + + + S TY Y A +Y Sbjct: 151 ILPSALRRSLPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYMSFQAYGIAAVLY 210 Query: 200 LIL 202 I+ Sbjct: 211 AIV 213 >gi|302545138|ref|ZP_07297480.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces hygroscopicus ATCC 53653] gi|302462756|gb|EFL25849.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces himastatinicus ATCC 53653] Length = 247 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 107/211 (50%), Gaps = 12/211 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + +T+ + S +L + F I + R + + YV IFRGT LV +F Sbjct: 10 LLPGVWITVQLTLFSAAFALAVAFGIGMTRTS-RLRFVRFLTGAYVEIFRGTSALVLMFW 68 Query: 77 IFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 + + +P G A ++++ LN+ AY SEI+R +I S+ Q +A+ A+ T Q Sbjct: 69 LAFVMPLAFGWQLFPMWAAVLAIGLNYGAYGSEIVRGAIASVAPAQGEAAIALSFTPAQR 128 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ--RIVSTTYQP----- 188 +R +ILPQ I P ++ I ILK+T++ S + + +I AQ R+ + Sbjct: 129 MRRVILPQAIPEMIPPFNNLLIEILKATALVSAVNVADITFAAQLSRLATGESAQIYSII 188 Query: 189 LIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 L++Y LAF ILT +++ + ++++ Q Sbjct: 189 LVLYFVLAF---ILTRLMRLLERRAKANIGQ 216 >gi|71736000|ref|YP_274549.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556553|gb|AAZ35764.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 324 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 24/215 (11%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY----------G 80 S V S+I+G +A+ R+ S + +L Y+W FR P L+ L +++ G Sbjct: 94 STVFSIILGTALALARLSGSPLLAALAWG-YIWFFRSMPALLVLIILYNFAYLYDHIVLG 152 Query: 81 LPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +P +VF F ++ L+L +AY +EIIR +I + GQ +A+ A+GL Sbjct: 153 VPFTDLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAALGLP 212 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PL 189 + + IILPQ + + +E I ++K TS+ + +PE+F T Q I + T PL Sbjct: 213 ASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPL 272 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 +I + YLI+T+ Q +E + T V Sbjct: 273 LIVATV--WYLIITTLLTSAQYYVERHFARGTARV 305 >gi|327468421|gb|EGF13906.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK330] gi|327472448|gb|EGF17879.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK408] gi|332365134|gb|EGJ42897.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1059] Length = 230 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 88/149 (59%), Gaps = 10/149 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-----IGIVFDSF---VAIIISLTLNFSAYISEIIRS 112 Y++I R TP +V LF++FYG+P +G+ +++ V +II++ L F+A I+E+ ++ Sbjct: 59 YIFILRCTPPIVLLFLVFYGIPEFLEWWLGLDINNWSRTVFVIITMILLFAAMIAEVFKA 118 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +++PKGQ +A +IGLT QT I+LPQ + L++ +++++ ++A TI Sbjct: 119 AYLAVPKGQTEAGLSIGLTPVQTFLRIVLPQAFRIALPNLTTALLNLMRDAALAYTIGAV 178 Query: 173 EIFQTAQRIVSTTYQ--PLIIYCELAFVY 199 ++ Q ++S L Y +A +Y Sbjct: 179 DVMGAGQNLISRNLGNYSLETYTAVALIY 207 >gi|297567746|ref|YP_003686717.1| hypothetical protein Mesil_3398 [Meiothermus silvanus DSM 9946] gi|296852195|gb|ADH65209.1| hypothetical protein Mesil_3398 [Meiothermus silvanus DSM 9946] Length = 378 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/141 (29%), Positives = 86/141 (60%), Gaps = 1/141 (0%) Query: 64 IFRGTPLLVQLFV-IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + G PL+V+ V +GL + F A++ L + +++I+EI+R +++++P+GQW Sbjct: 218 VLGGLPLVVEFPVRTSFGLRGGLELSPEFAALLFGLVVYTASFIAEIVRGAVLAVPRGQW 277 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A+GL+ Q +R IILPQ I PL+++++++ K++S+A + P++F I Sbjct: 278 EAARALGLSAPQVLRWIILPQAIRIVLPPLANQYLNLTKNSSLAVAVGFPDLFSVYNTIA 337 Query: 183 STTYQPLIIYCELAFVYLILT 203 + + + L + VYL+++ Sbjct: 338 NQSGRSLEGIVIVMGVYLVVS 358 Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D++ Q A + TL + V++ ++GF + + R+ S + + YV + R TPL Sbjct: 76 DTYTQAFLAGFLNTLRVVVGGLVLATLLGFVVGIARLS-SHPLARGLALAYVELVRNTPL 134 Query: 71 LVQLFVIFY 79 L+QLFV ++ Sbjct: 135 LLQLFVWYF 143 >gi|32265844|ref|NP_859876.1| glutamine ABC transporter permease GlnP [Helicobacter hepaticus ATCC 51449] gi|32261893|gb|AAP76942.1| glutamine ABC transporter permease GlnP [Helicobacter hepaticus ATCC 51449] Length = 219 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 2/169 (1%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+ +TL I+ ++SLIIGF A I +F +S I+ YV + R TPLL+QLF ++Y Sbjct: 17 ALSLTLYISFFGILLSLIIGFISAWI-LFLKVRFLSPIVAIYVELARNTPLLIQLFFLYY 75 Query: 80 GLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 GL I GI + +V I L Y+ E R+ + SI Q +++ +IGL Q + + Sbjct: 76 GLHSIIGINLNEYVCAITGLAFLGGGYMCESFRTGLESISSSQIESAQSIGLQSHQMMFY 135 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 IILPQ+++ + + + I +LK TSV S I + +I + I++ Y+ Sbjct: 136 IILPQSLSVALPSVGANVIFLLKETSVVSVIALADIMFVTKDIITHYYK 184 >gi|33595040|ref|NP_882683.1| glutamate/aspartate transport system permease protein [Bordetella parapertussis 12822] gi|33565117|emb|CAE35912.1| glutamate/aspartate transport system permease protein [Bordetella parapertussis] Length = 227 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 102/196 (52%), Gaps = 10/196 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + IID+ P L + +L + S +++G +A+ R++ ++ + YV +F Sbjct: 6 YQAIIDALPYLFLTGLRFSLLLTLSSAAGGVVLGALLAIARLY-GRRWVAWLAAIYVNLF 64 Query: 66 RGTPLLVQLFVIFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 R PL++ +F+I++ LP++ IV + + ++ L +AY SEIIR+ I S Sbjct: 65 RSLPLVLVIFLIYFILPYLLQWITQAERPIVLGATGSAFVTFILFEAAYFSEIIRAGIGS 124 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + GQ+ A A+GLT Q +R +ILPQ + L ++ I I + T++ +++P+ Sbjct: 125 VGPGQYAAGSALGLTHGQVLRKVILPQAVRNMLPVLLTQVIVIFQETALVYVLSLPDFLG 184 Query: 177 TAQRIVSTTYQPLIIY 192 A +I + + +Y Sbjct: 185 AATKIAQRDNRLVEMY 200 >gi|209528046|ref|ZP_03276526.1| polar amino acid ABC transporter, inner membrane subunit [Arthrospira maxima CS-328] gi|209491532|gb|EDZ91907.1| polar amino acid ABC transporter, inner membrane subunit [Arthrospira maxima CS-328] Length = 405 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 116/216 (53%), Gaps = 17/216 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIFRGTPLLVQLF 75 L+ +++TL ++ IS ++ IG +A+ R SD +I + Y+ I RG PL+ LF Sbjct: 195 LWGGLMLTLLMSVISILLCFPIGVLLALGRQ--SDLPVIRGLSIAYIEIIRGLPLITILF 252 Query: 76 VIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 + LP G+ D + I+ LT+ SAY++E +R + +IP+GQ++A+ A+GL Sbjct: 253 MGQILLPLFLPEGMRPDRILRAIVGLTMFSSAYLAENVRGGLQAIPRGQYEAAKALGLNP 312 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 T+ IILPQ + S + +FIS+ + T++ + + + E+ ++ I++ Q L Y Sbjct: 313 ALTMVLIILPQALKISIPSIVGQFISLFQDTTLLAIVGLVELLGISRSILANP-QFLGRY 371 Query: 193 CELAFVYLILTS----FCYIIQI---KIESSVTQHT 221 E VYL L FCY++ + K+E + Sbjct: 372 AE---VYLFLGVLYWLFCYLMSLASRKLEKQLNTEN 404 >gi|76817664|ref|YP_337744.1| histidine transport system permease [Burkholderia pseudomallei 1710b] gi|76582137|gb|ABA51611.1| histidine transport system permease protein [Burkholderia pseudomallei 1710b] Length = 636 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 95/184 (51%), Gaps = 13/184 (7%) Query: 32 FVISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF 88 V+SL +GF +AV I + +S + Y ++FRGTPL VQL + + G+ + +V Sbjct: 429 LVVSLGLGFGLAVPLAIARASRNRAVSGAVWLYTYVFRGTPLYVQLLLCYTGIYSLSVVH 488 Query: 89 D----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 D + +++ TLN AY +EI +I S G+ +A A G++R + Sbjct: 489 DHAWLDSFFRSAMNCTLLAFTLNECAYATEIFAGAIKSTAPGEIEAGLAYGMSRFKLYTR 548 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 +ILP + + S+E I +L +T++A T T+P+I + + + S TY Y A + Sbjct: 549 VILPSALRRALPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYASFQAYGIAAAL 608 Query: 199 YLIL 202 Y ++ Sbjct: 609 YAVV 612 >gi|300718308|ref|YP_003743111.1| amino acid ABC transporter permease [Erwinia billingiae Eb661] gi|299064144|emb|CAX61264.1| amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 230 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 113/215 (52%), Gaps = 14/215 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+ VTL +A F+IS ++G +A I ++ ++ Y F+G P++V +F+ +Y Sbjct: 17 AVPVTLAMAVTIFIISTLLGGLLAFIE-HKKIPVLRQLVVVYKITFKGIPMVVVIFLAYY 75 Query: 80 GLPH--------IGIVFD-----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 GLP +G+ + ++ III+LT +A+ +E+++ ++ S GQ DA++ Sbjct: 76 GLPLALQSMSSLLGVEINAHAMPNWAIIIIALTACVAAFQAEVVKGALNSFDSGQSDAAH 135 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++G + Q R ++ PQ I + L++ F+ I+K+ S+A I + +IF AQ + + Sbjct: 136 SLGYSNGQLFRRVLFPQIIVAAIPDLANSFMVIMKALSLAFAIEVVDIFAQAQLTAALNF 195 Query: 187 QPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 L + Y+++ + KIE+++ T Sbjct: 196 YYLEAFLIAVVFYMVIAYVVTKVADKIEAALRVRT 230 >gi|224368337|ref|YP_002602500.1| ABC-type arginine/histidine transport system, permease component [Desulfobacterium autotrophicum HRM2] gi|223691053|gb|ACN14336.1| ABC-type arginine/histidine transport system, permease component [Desulfobacterium autotrophicum HRM2] Length = 230 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 107/223 (47%), Gaps = 13/223 (5%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + + LL +T+ + + VI++++G A+ ++ S + +I Y + RG P Sbjct: 4 LHGYGPLLIKGAKLTITVGAGAMVITILLGLGAALCKLS-SIKSLGIIAETYTTVIRGIP 62 Query: 70 LLVQLFVIFYGLP------------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 LV + +++YG P I + VA I+++ + A+ +E+ R + +++ Sbjct: 63 ELVLILLVYYGAPTLIQDMAAFFGQEIYVEIKPMVAGILTIGFIYGAFATEVFRGAFLAV 122 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKGQ +A+ A G+ R I+LPQ + L + ++ ++K+T++ S I +PE+ ++ Sbjct: 123 PKGQIEAAQACGMGPLLVFRRILLPQMWRFAIPGLGNVWMVLIKATALVSVIQLPELMRS 182 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 ++P Y + +YL +T F Q E + Sbjct: 183 TDIAARNLHKPFTCYFAASLIYLAITIFSLFFQQWAERKANRG 225 >gi|209552105|ref|YP_002284021.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539698|gb|ACI59629.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 222 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/153 (30%), Positives = 87/153 (56%), Gaps = 3/153 (1%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEI 109 + ++ ++ YV + RG P+L+ LF IF+ LP + G+ +F + ++LTL A E Sbjct: 49 NALVRTLVRMYVELIRGVPVLILLFWIFFCLPVVTGLEISNFFSSTLALTLFMGAATCES 108 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP-LSSEFISILKSTSVAST 168 R+++ SIP Q+DA A+GLT K + +++P + A+P L S +++ K +S+AS Sbjct: 109 FRAALKSIPHEQYDACTALGLTNKSRLLDVVVP-LMAMRAIPNLLSNTVALFKESSLASA 167 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 + E+ Q I ++T +P+ + + +Y I Sbjct: 168 VGTVELMYIGQNIANSTARPIEVLTVVGILYFI 200 >gi|327331111|gb|EGE72851.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Propionibacterium acnes HL097PA1] Length = 314 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 25/202 (12%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-----P--H 83 + ++ + +A++R + ++ + Y+++FRG P+ QL +F+GL P Sbjct: 74 AMLLGTAVALLMAMMR-QSRNPVLRGVSRAYIFVFRGVPVYTQL--VFWGLLAVLYPTLS 130 Query: 84 IGIVFD--------------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 IG+ F + A II L LN AY++EIIRS + S+ GQ +A+ A+G Sbjct: 131 IGVPFSGPQLASIETKKVVTALAAAIIGLGLNEGAYLAEIIRSGLESVDAGQSEAAKALG 190 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA-QRIVSTTYQP 188 + +R +I+PQ + PL +E I +LK+TS+ + Q A I + Y P Sbjct: 191 MKPSLIMRRVIIPQAMRVIIPPLGNETIGMLKTTSLVLAVPFTLDLQYATSAIANRIYAP 250 Query: 189 LIIYCELAFVYLILTSFCYIIQ 210 + + AF YL++TS I Q Sbjct: 251 IPLLIVAAFWYLVVTSVLMIGQ 272 >gi|325067175|ref|ZP_08125848.1| amino acid ABC transporter membrane protein [Actinomyces oris K20] gi|326771648|ref|ZP_08230933.1| glutamate permease [Actinomyces viscosus C505] gi|326637781|gb|EGE38682.1| glutamate permease [Actinomyces viscosus C505] Length = 218 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 73/132 (55%) Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P L + ++ LPH+GI F ++I++L + S ++ E +RS I S+PKGQ +A+ A+ Sbjct: 62 PNLCLMVLVGLALPHVGITIPLFWSVIVALVFSSSGFVCETVRSGINSVPKGQIEAARAL 121 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+ IR I+LPQ + + PL + FI+ L +S+A+ I + E+ QRI Sbjct: 122 GMPFGLIIRGIVLPQALARTIQPLVNIFIACLIGSSLAAAIGVVELTAVTQRINQERAAG 181 Query: 189 LIIYCELAFVYL 200 +I + YL Sbjct: 182 VITFLTSGLTYL 193 >gi|298486874|ref|ZP_07004930.1| Amino acid ABC transporter permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158741|gb|EFH99805.1| Amino acid ABC transporter permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320324338|gb|EFW80417.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320328539|gb|EFW84541.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 324 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 24/215 (11%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY----------G 80 S V S+I+G +A+ R+ S + +L Y+W FR P L+ L +++ G Sbjct: 94 STVFSIILGTALALARLSGSPLLAALAWG-YIWFFRSMPALLVLIILYNFAYLYDHIVLG 152 Query: 81 LPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +P +VF F ++ L+L +AY +EIIR +I + GQ +A+ A+GL Sbjct: 153 VPFTDLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAALGLP 212 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PL 189 + + IILPQ + + +E I ++K TS+ + +PE+F T Q I + T PL Sbjct: 213 ASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPL 272 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 +I + YLI+T+ Q +E + T V Sbjct: 273 LIVATV--WYLIITTLLTSAQYYVERHFARGTARV 305 >gi|332359338|gb|EGJ37159.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK49] Length = 230 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 88/149 (59%), Gaps = 10/149 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-----IGIVFDSF---VAIIISLTLNFSAYISEIIRS 112 Y++I R TP +V LF++FYG+P +G+ +++ V +II++ L F+A I+E+ ++ Sbjct: 59 YIFILRCTPPIVLLFLVFYGIPEFLEWWLGLDINNWSRTVFVIITMILLFAAMIAEVFKA 118 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +++PKGQ +A +IGLT QT I+LPQ + L++ +++++ ++A TI Sbjct: 119 AYLAVPKGQTEAGLSIGLTPVQTFLRIVLPQAFRIALPNLTTALLNLMRDAALAYTIGAV 178 Query: 173 EIFQTAQRIVSTTYQ--PLIIYCELAFVY 199 ++ Q ++S L Y +A +Y Sbjct: 179 DVMGAGQNLISRNLGNYSLETYTAVALIY 207 >gi|332530363|ref|ZP_08406308.1| polar amino acid abc transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] gi|332040174|gb|EGI76555.1| polar amino acid abc transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] Length = 220 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 49/153 (32%), Positives = 91/153 (59%), Gaps = 1/153 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+ +T + +SFV ++G + V+R+ + +++ YV IFR P + L I + Sbjct: 18 ALFLTWKLTIVSFVPGFLLGMIVTVLRLLPL-PPLRFVLNVYVEIFRNIPSVALLIFIVF 76 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 LP + +V D ++I++LTL SA+ ++ +RS I +IP GQ +A+ ++G+ Q I + Sbjct: 77 ALPDLEVVIDYEPSVILTLTLVCSAFTADYLRSGINTIPGGQIEAALSLGMRPMQIIFAL 136 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +LPQ + P++S I+++ STS+AS + +P Sbjct: 137 VLPQALRAVVQPMTSLLIALMLSTSLASQVPLP 169 >gi|312961852|ref|ZP_07776350.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311284111|gb|EFQ62694.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 233 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 11/166 (6%) Query: 60 FYVWIFRGTPLLVQLFVIFYGL--------PHIGIVF---DSFVAIIISLTLNFSAYISE 108 Y + R P LV + +IFY L G + D F A +I+L + AY +E Sbjct: 56 LYTTLIRSVPDLVLILLIFYSLQLWLNDLTETFGWDYFEIDPFTAGVITLGFIYGAYFTE 115 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 R +I+S+P GQ +A+ A GL+R Q R ++ PQ + + L + ++ +LKST++ S Sbjct: 116 NFRGAILSVPVGQLEAATAYGLSRWQRFRLVLFPQLMRFALPGLGNNWLVLLKSTALVSI 175 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 I + ++ + AQ TT +PL VYL++T+ I ++E Sbjct: 176 IGLSDLVKAAQNAGKTTSEPLYFLILAGLVYLVITTLSNRIFKRLE 221 >gi|300725184|ref|YP_003714512.1| putative high-affinity glutamine ABC transporter membrane protein [Xenorhabdus nematophila ATCC 19061] gi|297631729|emb|CBJ92448.1| putative high-affinity glutamine transport protein (ABC superfamily, membrane) [Xenorhabdus nematophila ATCC 19061] Length = 247 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/228 (23%), Positives = 122/228 (53%), Gaps = 14/228 (6%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPI----ACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 W L++ +FP +TL I IS V+ ++ G +A++R F+ + +++ ++ Sbjct: 9 NWRYLLLGTFPDGPLEGAALTLAISIMAGGISIVLGIMAGVALAMLRGFWVN-LLAAVLG 67 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 F FR P+++ +F ++ LP + G+ ++ +L L SAY++ +++ I++I Sbjct: 68 F----FRAIPVIMLIFWTYFLLPVVLGMEIPEITTVVCALALITSAYLAHGVKAGILAIS 123 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW A ++G R + + +IILPQ + +++I+++K TS+A + + E+ A Sbjct: 124 EGQWRAGLSLGFNRWEVLWYIILPQALRMMVPSFINQWIALIKDTSLAYIVGVGELSFLA 183 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 ++ + + ++Y F+++ L F + +++ ++ +SV + Sbjct: 184 TQVNNRS----MVYPMEVFLFVALIYFVMCLSLELIANYVARRFSVKR 227 >gi|295698937|ref|YP_003606830.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1002] gi|295438150|gb|ADG17319.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 602 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 117/233 (50%), Gaps = 32/233 (13%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EWF + + + + TL + + +G IA+ R+ S + F VW Sbjct: 67 EWF------LSEPVLSGLGRTLLLTALGAAFGFALGVPIALARVSRSPLLAGCAWAF-VW 119 Query: 64 IFRGTPLLVQLFVI-----FYGLPHIGIVFDS--------------FVAIIISLTLNFSA 104 +FR PL+V L ++ Y H+G+ F S F+A ++ LTLN +A Sbjct: 120 LFRSIPLIVLLLILNNLGYLYETVHLGLPFTSVVVLDVPTTELISPFLAAVLGLTLNHAA 179 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS-SEFISILKST 163 + +E+IR I S+ GQ +A+ A+GL R++ R I+LPQ + + VP + ++ I++ K + Sbjct: 180 FSAEVIRGGIQSVDHGQLEAAAALGLPRERQARRIVLPQAM-RAIVPTAFNDLIALAKGS 238 Query: 164 SVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 S+ + +PE+F T Q I + PL++ + YLI+ + IQ+ +E Sbjct: 239 SMVYVLAMPELFYTVQIIYRRNLEVIPLLMVATV--WYLIILTVLSAIQVYVE 289 >gi|212711637|ref|ZP_03319765.1| hypothetical protein PROVALCAL_02712 [Providencia alcalifaciens DSM 30120] gi|212685739|gb|EEB45267.1| hypothetical protein PROVALCAL_02712 [Providencia alcalifaciens DSM 30120] Length = 262 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 110/211 (52%), Gaps = 29/211 (13%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFV 76 ++T+ I+ + + + ++GF +A R D+ I+ + F Y+ IFR TPLLVQLF Sbjct: 39 GFLLTVWISICTIIAATLLGFIVASAR----DSQIAPLRWFVSVYISIFRNTPLLVQLFF 94 Query: 77 IFY--------------GLPHIGIVFD--------SFVAIIISLTLNFSAYISEIIRSSI 114 ++ PH +F F+A + LTL +I+E +RS I Sbjct: 95 WYFASGEILPAAAMEWLNTPHEVDIFGLTLGWPSFEFLAGFVGLTLYTVPFIAEEVRSGI 154 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 + +GQ A+ A+GLT Q++R +ILPQ + + PL ++++++K++S+ I + E+ Sbjct: 155 RGVRQGQKQAALALGLTSWQSMRLVILPQAVKIALPPLLGQYMNVVKNSSLTMAIGVAEL 214 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSF 205 ++++ S + Q + +Y+++ +F Sbjct: 215 SYVSRQVDSQSLQTFAAFGLATVLYIVIIAF 245 >gi|322412435|gb|EFY03343.1| Amino acid ABC transporter permease protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 267 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 106/210 (50%), Gaps = 16/210 (7%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W + + D+ P ++ + +TL + V LI+ A+++I I+ I +V Sbjct: 26 FSW-HAVFDAIPNII-QRLPITLGLTLAGAVFGLILALIFAIVKIN-KVKILYPIQAVFV 82 Query: 63 WIFRGTPLLVQLFVIFYGLP------HIGIVFD-------SFVAIIISLTLNFSAYISEI 109 RGTP+LVQL + +YG+P + FD + V I + N +AY SE Sbjct: 83 SFLRGTPILVQLMLTYYGIPLFLKFLNQKYGFDWNINAIPASVFAITAFAFNEAAYASET 142 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IR++I+S+ G+ +A+ ++G+ Q R +I+P + L + I + K TS+A + Sbjct: 143 IRAAILSVDTGEIEAAKSLGMNSVQVYRRVIIPNAAVVAIPTLINGLIGLTKGTSLAFSA 202 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +I E+F AQ + + Y+ Y +A VY Sbjct: 203 SIVELFAQAQILGGSDYRYFERYISVALVY 232 >gi|313123230|ref|YP_004033489.1| glutamine ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279793|gb|ADQ60512.1| Glutamine ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325684594|gb|EGD26753.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 213 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 94/177 (53%), Gaps = 2/177 (1%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGI 86 + IS SLIIG A++ + + YV IFR PLLV V + LP + + Sbjct: 23 SLISLFFSLIIGSGFAILETV-PNKFWRAVAKVYVEIFRNIPLLVVTMVFYLVLPTYTPL 81 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 F A I L++ SA+I+E +RS I S+ GQ + + + G+T Q +R++ILPQ Sbjct: 82 KLTGFQAGTIGLSIYSSAFIAETVRSGIQSVGTGQMEGARSNGMTYWQAMRYVILPQAFR 141 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++F++++K++S+ + + ++ + S T+Q + Y ++ YL LT Sbjct: 142 IVIPPLGNQFVNLIKNSSILAFVAGFDLMYQGDIVASNTFQTIPSYVLVSLFYLALT 198 >gi|295680983|ref|YP_003609557.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1002] gi|295440878|gb|ADG20046.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 229 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 109/219 (49%), Gaps = 12/219 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 ++ F LL A VT+ +A +S S +G A ++ ++ ++S I Y + R Sbjct: 1 MLFQGFGPLLLAGTWVTIKLAVLSLAASFALGLLGAAAKLS-TNRVLSRIGTMYTTLIRA 59 Query: 68 TPLLVQLFVIFYG----LPHIGIVF-------DSFVAIIISLTLNFSAYISEIIRSSIIS 116 P LV + ++FY L + +F D F+A +I+L + AY +E R + +S Sbjct: 60 VPDLVLMLLLFYSIQIWLNELTDMFSMEQIDIDPFLAGVITLGFIYGAYFTETFRGAFLS 119 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ +A +A G++ ++ I+ PQ + + + + + ++K+T++ S I + ++ + Sbjct: 120 VPRGQIEAGFAYGISARRVFTRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVK 179 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +Q +T +YL +T+ ++ I++E Sbjct: 180 ASQDAGKSTQSFFFFTLATGAIYLAITTISNLVLIRLEK 218 >gi|261820368|ref|YP_003258474.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261604381|gb|ACX86867.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 249 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 91/173 (52%), Gaps = 12/173 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + + + +A S + S++IGF R + L+ YV +FR TP L QL+ +F+ Sbjct: 35 GLTLAVELAVWSLLGSMLIGFLCVFARQSNLRPLRWLVTA-YVELFRNTPGLAQLYFLFF 93 Query: 80 GLP---HIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ H+ + F ++I+L+L + A+++EI+R+ I ++P+ +A+ ++ Sbjct: 94 GIGSYFHLSTYGQNGELPLVSPFQFVVIALSLQYGAFVAEILRAGIEAVPRTTVEAAESL 153 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 G R + + HIILP TS L + I+KST++A I +PE A I Sbjct: 154 GYNRPRAMIHIILPLAFRTSLPALGNNMAQIVKSTALAYAIAVPEALYVAHEI 206 >gi|311106717|ref|YP_003979570.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 11 [Achromobacter xylosoxidans A8] gi|310761406|gb|ADP16855.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 11 [Achromobacter xylosoxidans A8] Length = 229 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 106/201 (52%), Gaps = 20/201 (9%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS---LIMHFYVWIFRGTPLL 71 QLL + + VT+ + F+++ ++ F IAV + T ++ ++ YV R PLL Sbjct: 10 QLLLSGMAVTVQL----FLVAWVMAFAIAVTLVVVRATNLAPCRWLVDAYVEYHRNVPLL 65 Query: 72 VQLFVIFYGLPHIGIVFDSFVAII-----------ISLTLNFSAYISEIIRSSIISIPKG 120 VQ+ ++G+P + + + F + I+L L +AYI+E IRS + +IP Sbjct: 66 VQVLFWYFGMPEL--LPEGFRMWLYQHNAEMSLAAIALALGSAAYIAEDIRSGLRAIPFT 123 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q++A+ A+G + Q +R +I+PQ + S PL + + K+TSVA I + E+ A+ Sbjct: 124 QFEAARALGASYLQCMRFVIVPQAVRISIPPLVGRALLLFKNTSVAMAIGVMELTYQARE 183 Query: 181 IVSTTYQPLIIYCELAFVYLI 201 I + TY+ + +YL+ Sbjct: 184 IENETYRTFATFGAATIMYLL 204 >gi|4204969|gb|AAD10859.1| orf p; putative ATP-binding cassette transport system; similar to integral membrane proteins and to components of ABC transport systems [Leuconostoc lactis] Length = 198 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 77/132 (58%), Gaps = 3/132 (2%) Query: 59 HF---YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 HF Y I TPLL+QLF I+YGLP +G+ + + II LT AY++++ I+ Sbjct: 30 HFANGYRSIALNTPLLIQLFFIYYGLPPLGLKVPAELTAIIGLTFLGGAYMAKVFTGGIL 89 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +I K Q ++ AIGL++ Q +++++PQ + +++ I ++K TS+ + I IPEI Sbjct: 90 AIDKIQIESGQAIGLSKFQLAKYVLIPQGLLFCLPGVAANIIFLIKETSIFTVIAIPEIT 149 Query: 176 QTAQRIVSTTYQ 187 T ++ Y+ Sbjct: 150 NTTLDLIGQNYR 161 >gi|327188019|gb|EGE55249.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 260 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 14/168 (8%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV------AIIISLTLNFSAYISEIIRSSI 114 YV FR P LV +F Y P +VF +++ +I L + SAY++EI R +I Sbjct: 92 YVQAFRNAPHLVLIFATTYIFPFEIVVFGNYLPFPDWLKAVIGLAIPASAYVAEITRGAI 151 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +SIP QW+A+ +G +R Q +R IILPQ + S P + SI TS+AS + + E+ Sbjct: 152 LSIPTTQWEAAKGLGFSRSQALRWIILPQCLRRSLPPWMNILASITMGTSLASLVGVHEL 211 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSF--CYIIQIKIESSVTQH 220 A + + + + +A++ ++ F CY I ++E QH Sbjct: 212 LHAATDASTAVRR--LDFTIIAYIVVMAAFFTLCYPIARRLE----QH 253 >gi|300722326|ref|YP_003711611.1| glutamate/aspartate ABC transporter membrane protein [Xenorhabdus nematophila ATCC 19061] gi|297628828|emb|CBJ89406.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Xenorhabdus nematophila ATCC 19061] Length = 246 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 97/174 (55%), Gaps = 14/174 (8%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ ++ +++I+ I+G ++R + ++ I YV +FR PL+VQ F + +P Sbjct: 31 VTITLSICAWIIAFIVGSLFGILRTV-PNKFLAGIGTCYVELFRNVPLIVQFFTWYMVVP 89 Query: 83 HI---------GIVFDS----FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 + D F++ +I L L +A I E +R++I S+PKGQ A A+G Sbjct: 90 EFLPRDVSNWFKMELDPNIQFFISSMICLGLFTAARICEQVRAAIQSLPKGQKAAGLAMG 149 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 LT QT R+++LP P++SE ++++K++++ASTI + ++ A +++ Sbjct: 150 LTLPQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLD 203 >gi|206562621|ref|YP_002233384.1| histidine transport system permease [Burkholderia cenocepacia J2315] gi|198038661|emb|CAR54621.1| histidine transport system permease [Burkholderia cenocepacia J2315] Length = 237 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 13/183 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+S+ GF +AV I S+ IS + Y ++FRGTPL VQL + + G+ + +V D Sbjct: 31 VVSIAFGFALAVPLAIARASSNRWISGPVWLYTYVFRGTPLYVQLLMCYTGIYSLQVVHD 90 Query: 90 ----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + +++ LN AY +EI +I + G+ +A A G++R + I Sbjct: 91 HVLLDTFFRNAMNCTLLAFVLNECAYATEIFAGAIKATSSGEIEAGMAYGMSRFKLYTRI 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILP + S S+E I +L +T++A T T+P+I + + + S TY Y A +Y Sbjct: 151 ILPSALRRSLPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYMSFQAYGIAAVLY 210 Query: 200 LIL 202 ++ Sbjct: 211 AVV 213 >gi|300690823|ref|YP_003751818.1| amino acid transmembrane abc transporter protein [Ralstonia solanacearum PSI07] gi|299077883|emb|CBJ50522.1| putative amino acid transmembrane abc transporter protein [Ralstonia solanacearum PSI07] Length = 230 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 95/165 (57%), Gaps = 7/165 (4%) Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V++ RGTPLL+ +F ++ LP + G D F ++ +L + AY++EI+R+ I ++P+G Sbjct: 65 VYVVRGTPLLMVIFWAYFLLPTLTGQRTDQFNTMLTALVIFDGAYLAEIVRAGIQALPRG 124 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQ 179 Q +++ ++GL Q +R +ILPQ + L ++ +S +K TS+ I++PE+ F Q Sbjct: 125 QMESARSLGLPYLQAMRLVILPQALRNMLPSLVNQLVSTIKETSLGYIISLPEVSFVAGQ 184 Query: 180 RIVSTTYQPLIIYCELAFVYLI----LTSFCYIIQIKIES-SVTQ 219 + Q +Y LA Y LT ++++ ++ + ++TQ Sbjct: 185 ISTAVMTQSAEVYGLLALSYFAMCFGLTRVAFLLERRLAARALTQ 229 >gi|309811071|ref|ZP_07704869.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185] gi|308435035|gb|EFP58869.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185] Length = 226 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 20/203 (9%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL-LVQLF 75 L A+ +T+ + ++ V SL++G +AV+R+ ++ + Y+ IFR TPL L+ L Sbjct: 10 LLDALWMTIKLTLVAAVGSLVLGTLVAVLRMS-PVPMLRFLGTSYINIFRNTPLTLIILS 68 Query: 76 VIFYGLPHIGIVF-----------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 +G+ ++F +I LT+ +AY+ E +RS + +IP GQ +A Sbjct: 69 CNLVLWAKLGVELADSKSPDFFTSNNFRLAVIGLTVYHAAYVCEALRSGVNTIPLGQAEA 128 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + +IGLT Q++R +ILPQ + VPL + I++ K+T+VA I + E+ ++ T Sbjct: 129 ARSIGLTFSQSLREVILPQAFRGAIVPLGNALIALTKNTTVAVVIGVMEMAAMLAKV--T 186 Query: 185 TYQPLIIY-----CELAFVYLIL 202 P ++ LAFV L L Sbjct: 187 EDDPGLLNQAFFASALAFVALTL 209 >gi|308062447|gb|ADO04335.1| glutamine ABC transporter, permease protein [Helicobacter pylori Cuz20] Length = 217 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 100/187 (53%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + + S P L + +TL I+ ++SL++GF A++ ++F IS ++ Sbjct: 1 MALDW-DFMFHSIPMFL-KGLELTLYISFFGILLSLLVGFLCAIV-LYFKTRFISPTVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEISRNTPLLIQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QKESALSLGFSPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQ 187 + Y+ Sbjct: 176 FIGIYYK 182 >gi|307544139|ref|YP_003896618.1| ABC transporter permease [Halomonas elongata DSM 2581] gi|307216163|emb|CBV41433.1| ABC-type transport system permease protein [Halomonas elongata DSM 2581] Length = 234 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/208 (25%), Positives = 106/208 (50%), Gaps = 20/208 (9%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P+L A+V T+ +A +S ++++++G A ++ + ++ + Y + RG P LV Sbjct: 9 PRLAEGALV-TVELAVLSLILAVVLGLITASAKMS-RNWLLHRLGTLYTTLIRGVPDLVL 66 Query: 74 LFVIFYGLPHIGI---------VFD--------SFVAIIISLTLNFSAYISEIIRSSIIS 116 + ++F+G IG+ FD FVA ++++ L F AY+ E R + ++ Sbjct: 67 MMLLFFG-GQIGVNMFTDWLYARFDIDIFININEFVAGVVTIGLIFGAYMGETFRGAFLA 125 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + GQ +A A G++ R I PQ + + LS+ ++ +LK+T++ S I + ++ + Sbjct: 126 VDNGQIEAGRAYGMSHWLVFRRIRFPQMMRHALPGLSNNWMVLLKTTALVSVIGLSDMVR 185 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTS 204 A T +P +A VYL++ S Sbjct: 186 VAAEASKATREPFTFMIIVAIVYLLIAS 213 >gi|330446186|ref|ZP_08309838.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490377|dbj|GAA04335.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 220 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 90/149 (60%), Gaps = 7/149 (4%) Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-----G--IVFDSFVAIIISLTLNFSAYISEIIRSSI 114 V + RG P L+ + IF+G I G + F++ +I+L+L F++Y ++ IR +I Sbjct: 39 VTVLRGLPELLIVLFIFFGSGQILFYITGDYVEISPFLSGVIALSLIFASYAAQTIRGAI 98 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++PKGQ +A+ A+G+++ +T II+PQ + + L+++++ +LK T++ S I + ++ Sbjct: 99 RAVPKGQREAASALGISKSRTFFAIIVPQAVRHALPGLTNQWLVLLKDTALVSLIGVTDL 158 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + AQ + T++ Y A VYL++T Sbjct: 159 LKQAQLTSAATHESFTWYATAAGVYLVIT 187 >gi|306825706|ref|ZP_07459045.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432067|gb|EFM35044.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 219 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/193 (31%), Positives = 105/193 (54%), Gaps = 14/193 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +TL I+ I+ V+S +IG +AV+R + ++ +I Y+ R P L+ +F Sbjct: 16 IFKGFGLTLYISLIAIVLSTLIGTVLAVMR-NGKNPVLRIISSIYIEFVRNVPNLLWIFT 74 Query: 77 IFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF +VF S A I + TL SA ++EIIR + ++ KGQ++A + G T Q Sbjct: 75 IF-------LVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQ 127 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQP---LI 190 + HIILPQ I + S+F++++K TS+ S I + E+F +Q ++ ++P Sbjct: 128 ILYHIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFEPEQVFS 187 Query: 191 IYCELAFVYLILT 203 +Y +A +Y I Sbjct: 188 LYILIALIYFIFN 200 >gi|261821755|ref|YP_003259861.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261605768|gb|ACX88254.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 321 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 113/210 (53%), Gaps = 26/210 (12%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY----------GLP 82 V S+I G +A+ R+ S ++S + Y+W+FR PL++ L +++ G+P Sbjct: 90 VFSIIFGTALALARLSPS-YLLSTLSWLYIWLFRSLPLILVLIILYNFSYLYDELALGVP 148 Query: 83 HIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 I+F D F ++ LTL SAY +EIIR I+ + GQ++AS A+GL Sbjct: 149 FTSIIFLRYPTIDLLDQFSVAVLGLTLVQSAYTAEIIRGGILGVDAGQFEASAALGLPGG 208 Query: 134 QTIRHIILPQTITTSAVPLS-SEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLI 190 + IILPQ + S +P +E IS+ K TS+ + +PE+F T Q I + T Q PL+ Sbjct: 209 RRTVRIILPQAL-RSILPTGFNEIISLAKGTSIVYVLALPELFYTVQVIYNRTQQVIPLL 267 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + + YL++T+ I+Q +E V++ Sbjct: 268 MVATIW--YLLITTVLSIVQYYVERYVSRG 295 >gi|228477639|ref|ZP_04062268.1| ABC-type amino acid transport permease component [Streptococcus salivarius SK126] gi|228250528|gb|EEK09739.1| ABC-type amino acid transport permease component [Streptococcus salivarius SK126] Length = 230 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 49/160 (30%), Positives = 88/160 (55%), Gaps = 10/160 (6%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH-----IGIVFDSFVAII---ISLTLN 101 D + + YV+I R TP +V LF++FYG+P +G+ + + +I +++ L Sbjct: 48 KDKALENLAKGYVFILRCTPPIVLLFLVFYGVPEFLNWWLGLDINDWSKLIFVLVTMVLL 107 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 FSA ISE+ +++ +IPKGQ +A +IGLT +QT II PQ + +++ +++++ Sbjct: 108 FSAMISEVFKAAYQAIPKGQLEAGLSIGLTSEQTFVRIIAPQAFKVALPNITTAILNLMR 167 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVY 199 ++A TI ++ ++S L Y +AFVY Sbjct: 168 DAALAYTIGFIDVMGKGNLLISRHLGNYSLETYTAVAFVY 207 >gi|207092261|ref|ZP_03240048.1| glutamine ABC transporter, permease protein [Helicobacter pylori HPKX_438_AG0C1] Length = 217 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 100/187 (53%), Gaps = 5/187 (2%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M +W + + S P + + +TL I+ ++SL++GF A++ ++F IS +++ Sbjct: 1 MALDW-DFMFHSIPAF-FKGLELTLYISFFGILLSLLVGFLCAIV-LYFEVRFISPVVYI 57 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I R TPLL+QLF ++YGL IG+ + I++L Y+S+ S+ Sbjct: 58 YGEIARNTPLLIQLFFLYYGLNEIGL--SALECTILALGFLGGGYMSQSFLLGFKSLASI 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +++ ++G + + +IILPQ+++ S + + I +LK TSV I + +I A+ Sbjct: 116 QRESALSLGFGPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKD 175 Query: 181 IVSTTYQ 187 + Y+ Sbjct: 176 FIGIYYK 182 >gi|167561988|ref|ZP_02354904.1| histidine transport system permease protein [Burkholderia oklahomensis EO147] gi|167574925|ref|ZP_02367799.1| histidine transport system permease protein [Burkholderia oklahomensis C6786] Length = 237 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 17/211 (8%) Query: 5 WFN-LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W N L D + + + +TL + +S I + +AV R+ + + Y + Sbjct: 9 WRNYLYTDGYR---FTGLAITLWLLVVSIGIGFCLSVPLAVARVSKKKWLAGAVW-LYTY 64 Query: 64 IFRGTPLLVQLFVIFYGL---------PHIGIVF-DSFVAIIISLTLNFSAYISEIIRSS 113 +FRGTPL VQL + + GL P + F D +++ TLN AY +EI + Sbjct: 65 VFRGTPLYVQLLLCYTGLYSLQVVRGAPMLDAFFRDGMNCTLLAFTLNTCAYTTEIFAGA 124 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIP 172 I + G+ +A+ A G++ R ++LP + A+PL S+E I +L +T+VA T T+P Sbjct: 125 IKATTYGEIEAARAYGMSTFTLYRRVVLPSALR-RALPLYSNEVILMLHATTVAFTATVP 183 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +I + A+ + S TY + A +YL ++ Sbjct: 184 DILKIARDVNSATYMSFHAFGIAALLYLAIS 214 >gi|330957732|gb|EGH57992.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Pseudomonas syringae pv. maculicola str. ES4326] Length = 236 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 94/182 (51%), Gaps = 13/182 (7%) Query: 35 SLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF--- 88 S+ IGF +++ I + + + FY ++FRGTPL +QL + + G+ + V Sbjct: 33 SIAIGFCVSIPLSIARVSKNRWVRWPVQFYTYLFRGTPLYIQLLICYTGIYSLAAVREQP 92 Query: 89 -------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 D+ I++ LN AY +EI SI S+ G+ +A+ A GLT + ++I+ Sbjct: 93 VLDAFFRDAMNCTILAFALNTCAYTTEIFAGSIRSMAHGEVEAAKAYGLTGWKLYAYVIM 152 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 P + S S+E I +L ST+VA T T+P+I + A+ S T+ + A +YL Sbjct: 153 PSALRRSLPYYSNEVILMLHSTTVAFTATVPDILKVARDANSATFMTFQSFGIAAIMYLT 212 Query: 202 LT 203 +T Sbjct: 213 VT 214 >gi|290473278|ref|YP_003466144.1| putative high-affinity glutamine ABC transporter membrane protein [Xenorhabdus bovienii SS-2004] gi|289172577|emb|CBJ79346.1| putative high-affinity glutamine transport protein (ABC superfamily, membrane) [Xenorhabdus bovienii SS-2004] Length = 249 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/223 (25%), Positives = 123/223 (55%), Gaps = 15/223 (6%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIG----FFIAVIRIFFSDTIISLIMH 59 W L++ +FP +TL I+ ++ VIS+++G +A++R F+ + +++ I+ Sbjct: 9 NWRYLLLGTFPDGPLEGAALTLVISIMAGVISIVLGTVAGVALAMLRGFWVN-LLAAILG 67 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 F FR P+++ +F ++ LP + G+ ++ +L L SAY++ +++ I++I Sbjct: 68 F----FRAIPVIMLIFWTYFLLPVVLGMEIPEITTVVCALALITSAYLAHGVKAGILAIG 123 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQT 177 +GQW A ++G R + + +I+LPQ + +++I+++K TS+A + + E+ F Sbjct: 124 EGQWRAGLSLGFNRWEVLWYIVLPQALRMMVPSFINQWIALIKDTSLAYIVGVAELSFLA 183 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 Q + P+ ++ +A VY ++ C +++ I +SV + Sbjct: 184 TQVNNRSMVYPMEVFLFVALVYFVM---CLSLEL-IANSVARR 222 >gi|257142742|ref|ZP_05591004.1| histidine transport system permease protein [Burkholderia thailandensis E264] Length = 237 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 13/183 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+S+ +GF +AV + + +S + Y ++FRGTPL VQL + + G+ + +V D Sbjct: 31 VVSIGLGFGLAVPLAVARASRNRAVSGAVWLYTYVFRGTPLYVQLLLCYTGIYSLSVVHD 90 Query: 90 ----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + +++ TLN AY +EI +I S G+ +A A G++R + + Sbjct: 91 HAWLDSFFRSAMNCTLLAFTLNECAYATEIFAGAIKSTAPGEIEAGLAYGMSRFKLYTRV 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILP + + S+E I +L T++A T T+P+I + + + S TY Y A +Y Sbjct: 151 ILPSALRRALPSYSNEVILMLHETTLAFTATVPDILKVTRDVNSATYASFQAYGIAAALY 210 Query: 200 LIL 202 ++ Sbjct: 211 ALI 213 >gi|154508314|ref|ZP_02043956.1| hypothetical protein ACTODO_00811 [Actinomyces odontolyticus ATCC 17982] gi|153797948|gb|EDN80368.1| hypothetical protein ACTODO_00811 [Actinomyces odontolyticus ATCC 17982] Length = 290 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 13/206 (6%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR-----IFFSDTIISLIMHFYVWI 64 I++FPQ+L A + + + I IS + + +A R +FF I + Y I Sbjct: 71 IEAFPQVL-AGLWLNIRILLISVLGVAVFATLLAAARTLAGPVFFP---IRFLAAAYTDI 126 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAII--ISLTLNFSAYISEIIRSSIISIPKGQW 122 FRG P LV L++I +G+P + A + ++L L +S+Y++E++R+ + S+ Q Sbjct: 127 FRGVPFLVVLYLIGFGIPALNPTTRIPTAFLGTVALILTYSSYVAEVLRAGLDSVHPSQR 186 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A+ ++GL+ QT+R II+PQ I L ++FIS+ K + S + + ++AQ + Sbjct: 187 YAARSLGLSHGQTLRMIIVPQAIRKVTPALMNDFISMQKDVGLISVLGAVDAIRSAQMVQ 246 Query: 183 STTYQPLIIYCELAFVYLILTSFCYI 208 + TY + Y +++IL SF +I Sbjct: 247 AKTYN-MTSYVVAGLLFIIL-SFPFI 270 >gi|330817963|ref|YP_004361668.1| ABC amino acid transporter, inner membrane subunit [Burkholderia gladioli BSR3] gi|327370356|gb|AEA61712.1| ABC amino acid transporter, inner membrane subunit [Burkholderia gladioli BSR3] Length = 237 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 17/211 (8%) Query: 5 WFN-LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W N L D + + + +TL + +S + + +A R+ +S + Y + Sbjct: 9 WRNYLYTDGYR---FTGVAITLWLLVVSIGLGFCLSVPLACARVS-KRRWLSGSVWLYTY 64 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFV----------AIIISLTLNFSAYISEIIRSS 113 +FRGTPL VQL + + GL + +V D+ + +++ TLN AY +EI + Sbjct: 65 VFRGTPLYVQLLLCYTGLYSLQVVRDTTMLNQFFRDGMHCTLLAFTLNTCAYTTEIFAGA 124 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIP 172 I S G+ +A+ A G++ R +ILP + A+PL S+E I +L +T+VA T T+P Sbjct: 125 IKSTAYGEIEAARAYGMSTFTLYRRVILPSALR-RALPLYSNEVILMLHATTVAFTATVP 183 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +I + A+ + S TY + A +YL ++ Sbjct: 184 DILKIARDVNSATYMSFHAFGIAALLYLAIS 214 >gi|329121397|ref|ZP_08250022.1| ABC superfamily ATP binding cassette transporter, membrane protein [Dialister micraerophilus DSM 19965] gi|327469687|gb|EGF15154.1| ABC superfamily ATP binding cassette transporter, membrane protein [Dialister micraerophilus DSM 19965] Length = 229 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 98/187 (52%), Gaps = 3/187 (1%) Query: 1 MKYEWFNLIIDSFPQL-LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M N + + L L + TL I+ +S S I+G F+ +I + + I L+ Sbjct: 1 MGLSELNFLFEGVNGLRLLQGLGTTLTISLLSVAGSCILGLFVGLI-MTLKNPFIQLLSK 59 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 FY+ R P LV LF+ ++G+ I F+A + L +A + +++RS++ SIP Sbjct: 60 FYLEFMRIMPQLVLLFIAYFGIAKAFNIHISGFIASLTVFILWGTAEMGDLVRSAVESIP 119 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 + Q++++ A+G ++ Q R II+PQ + P + F I+K+TS+ I + E+ +T Sbjct: 120 ENQYESAAALGFSKFQMYRFIIIPQAVGFLLPPAINLFTRIIKTTSLVVMIGVVEVLKTG 179 Query: 179 QRIVSTT 185 Q+++ Sbjct: 180 QQLIEAN 186 >gi|194469401|ref|ZP_03075385.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194455765|gb|EDX44604.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] Length = 210 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 99/186 (53%), Gaps = 1/186 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L I TL + F+ + + G +AV+R S + ++ V+I RG P+L+ +F+ Sbjct: 8 LLEGIGNTLLVTFTCFLSAFLTGLTVAVLR-RLSPLPLQKMLDVLVFILRGIPILIAVFL 66 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GLP IGI VA+ +S+ L +Y++E+ R ++ + + + G+ + Q I Sbjct: 67 VYFGLPSIGIYVSPLVAMNLSVGLISGSYLAEVFRGALKLVEPYEITVAKVAGMRQLQVI 126 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +I LPQ + S + +EF S+LK+T A T+ I EI + A + + T L IY Sbjct: 127 INIELPQMLRFSVPGIINEFSSVLKATPFAYTVGIAEITKQAMSLTAITLNGLQIYTLAG 186 Query: 197 FVYLIL 202 +Y I+ Sbjct: 187 VLYFII 192 >gi|149204303|ref|ZP_01881270.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius sp. TM1035] gi|149142188|gb|EDM30235.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius sp. TM1035] Length = 200 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 97/183 (53%), Gaps = 13/183 (7%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-----------GI 86 +G + V R + ++S + YV +FR PLLVQ+F+ ++ +P + + Sbjct: 1 MGSLVGVGRTL-PNKVVSTLCTTYVELFRNVPLLVQMFIWYFAVPEMLPEDAGRWMKRDM 59 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 FV +++L L ++ ++E +R+ I ++P G A+ A G+ Q R+++LP + Sbjct: 60 PQPEFVTAVVALGLYTASRVAEQVRAGIEAVPSGLKSAATAQGMGVAQVYRYVLLPISFR 119 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFC 206 P++SEF+++ K++S+A TI + E+ +Q+I T+Q Y +Y+ + + C Sbjct: 120 LIVPPMTSEFLTVFKNSSLALTIGLLELTAQSQQIAEYTFQSFEAYTAATVIYVFI-ALC 178 Query: 207 YII 209 I Sbjct: 179 ATI 181 >gi|153954684|ref|YP_001395449.1| hypothetical protein CKL_2066 [Clostridium kluyveri DSM 555] gi|219855153|ref|YP_002472275.1| hypothetical protein CKR_1810 [Clostridium kluyveri NBRC 12016] gi|146347542|gb|EDK34078.1| Hypothetical protein CKL_2066 [Clostridium kluyveri DSM 555] gi|219568877|dbj|BAH06861.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 236 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 109/210 (51%), Gaps = 28/210 (13%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI---RIFFSDTIISLIMHFYVWIF 65 II FP LY A+ T +++L++G +VI IF ++S ++HF Sbjct: 15 IISKFPITLYMAVTAT--------ILALVVGLIFSVIVKKNIF----LLSKVIHFINSFL 62 Query: 66 RGTPLLVQLFVIFYGLPHI--------GIVFD-----SFVAIIISLTLNFSAYISEIIRS 112 +G P+LV L++++Y +P I G +D + I + + + Y+ ++I S Sbjct: 63 KGIPVLVILYILYYSMPTILVSLGDSLGFKYDIKNPPKLMFGIFAFGITYIPYMCDMIIS 122 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +IP+GQ +A +IG T QT++ II+PQ + + F++ILK+TS+A ++I Sbjct: 123 AYDTIPRGQTEACDSIGFTTFQTMQKIIIPQMVVVCVPIFGNHFVNILKATSLAYMVSII 182 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 E+ A+ + T + + Y A +Y I+ Sbjct: 183 EMMGAAKNYATGTQRFMETYIVAALIYWII 212 >gi|167585824|ref|ZP_02378212.1| histidine transport system permease protein [Burkholderia ubonensis Bu] Length = 237 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 13/195 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL + +S + + +AV R+ +S + Y ++FRGTPL VQL + + Sbjct: 22 GVAITLWLLVVSIGLGFCLSVPLAVARVS-KKKWLSGAVWLYTYVFRGTPLYVQLLLCYT 80 Query: 80 GL---------PHIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 GL P + F + +++ TLN AY +EI +I + G+ +A+ A G Sbjct: 81 GLYSLQAVRGTPMLDAFFREGMNCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYG 140 Query: 130 LTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 ++ R +ILP + A+PL S+E I +L +T+VA T T+P+I + A+ + S TY Sbjct: 141 MSTFTMYRRVILPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMS 199 Query: 189 LIIYCELAFVYLILT 203 + A +YL+++ Sbjct: 200 FHAFGIAALLYLVIS 214 >gi|317046630|ref|YP_004114278.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316948247|gb|ADU67722.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 231 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/196 (28%), Positives = 104/196 (53%), Gaps = 10/196 (5%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 M ++ ++I F Q++ VVTL +A ++++++II + VIR+ + L+ Sbjct: 1 MALDFSSVITGHFGQMIVDGTVVTLELALGAWLMAMIIAMLLVVIRLTDQRIAVGLV-KA 59 Query: 61 YVWIFRGTPLLVQLFVIFYGLPH---------IGIVFDSFVAIIISLTLNFSAYISEIIR 111 YV R P L+QL + ++ +P I + F+ +++L L +AY SE IR Sbjct: 60 YVSYHRNVPTLIQLMMWYFAIPTLLPEALQMWINDLNAEFLFSLVALGLCQAAYFSEDIR 119 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 S + +IP GQ +A+ A+G+ + + +ILPQ I + L + + + K+TS+A I + Sbjct: 120 SGLRAIPDGQNEAARALGMGYVRAMWSVILPQGIRNALPALINHTVLLFKNTSLAMVIGV 179 Query: 172 PEIFQTAQRIVSTTYQ 187 E+ + I + T++ Sbjct: 180 AELTYVTRDIENQTFR 195 >gi|241113462|ref|YP_002973297.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861670|gb|ACS59336.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 510 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 14/209 (6%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W + + + P ++ + TL +A S V+ +IIG +AV+ I S + L Y Sbjct: 13 DW-DAMAEVLPSMISVGLKNTLILAAASTVLGVIIGMALAVMGISQS-RWLRLPARIYTD 70 Query: 64 IFRGTPLLVQLFVIFYGLPHIGI-VFDS--FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +FRG P +V + +I G IG +F F I++L+L AYI EI RS I S+ +G Sbjct: 71 VFRGLPAIVTILIIGQGFARIGREIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERG 130 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS----VASTITIPEIFQ 176 Q +A A+ ++ Q +R I++PQ I L ++FI +K +S + + EIF+ Sbjct: 131 QMEACRALSMSHGQGMRLIVIPQGIRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFR 190 Query: 177 TAQR--IVSTTYQPLIIYCELAFVYLILT 203 Q +V+ PL++ YL++T Sbjct: 191 VGQDQAVVTGNLSPLLLA---GVFYLVIT 216 >gi|104780400|ref|YP_606898.1| glutamate/aspartate ABC transporter permease [Pseudomonas entomophila L48] gi|95109387|emb|CAK14087.1| glutamate/aspartate ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 248 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/158 (32%), Positives = 90/158 (56%), Gaps = 15/158 (9%) Query: 36 LIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI---GI------ 86 L++G + V+R + ++S I YV +FR PLLVQLF+ ++ +P + G+ Sbjct: 44 LLLGSLLGVMRTV-PNRLVSGIATAYVELFRNVPLLVQLFIWYFLVPDLLPEGLQEWFKQ 102 Query: 87 ----VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + ++++I L L +A + E +R+ I ++P+GQ A A+G + Q +++LP Sbjct: 103 DLNPTTSALISVVICLGLFTAARVCEQVRTGIQALPRGQESAGRAMGFSLPQIYMNVLLP 162 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 Q PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 163 QAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|33598571|ref|NP_886214.1| glutamate/aspartate transport system permease protein [Bordetella parapertussis 12822] gi|33574700|emb|CAE39357.1| glutamate/aspartate transport system permease protein [Bordetella parapertussis] Length = 253 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/223 (27%), Positives = 112/223 (50%), Gaps = 22/223 (9%) Query: 1 MKYEW-FNLIIDSFP------QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI 53 M Y W +++ ++ P L + TL A ++++++L IG + V R + + Sbjct: 1 MNYNWNWHIFLEMSPTGGIYLGTLLTGMAWTLGTAALAWILALGIGIVVGVART--TQSK 58 Query: 54 ISLIMHF-YVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDS-------FVAIIISLTL 100 + IM YV FR PLLVQ+F+ ++ +P I G S F+ ++ L Sbjct: 59 WARIMGATYVEFFRNIPLLVQMFLWYFVVPEILPVQLGDAIKSIPPPWGIFIPAVLCLGF 118 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 S+ ++E +R+ I S P GQ A+ A+G+ Q R+++LP + PL+SE ++++ Sbjct: 119 YTSSRVAEQVRAGIESRPAGQRMAATALGMRPSQVYRYVLLPTSFRIILPPLTSELLNLI 178 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 K+TSVA TI + E+ A+ + ++Q + Y +L Sbjct: 179 KNTSVAFTIDLLELVGAARSMQEFSFQVFEAFAGATLCYFLLN 221 >gi|53718671|ref|YP_107657.1| histidine transport system permease [Burkholderia pseudomallei K96243] gi|53725158|ref|YP_102513.1| amino acid ABC transporter permease [Burkholderia mallei ATCC 23344] gi|67639859|ref|ZP_00438689.1| histidine transport system permease protein HisM [Burkholderia mallei GB8 horse 4] gi|121601274|ref|YP_992326.1| histidine ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|124386360|ref|YP_001028960.1| histidine ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126440775|ref|YP_001058138.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 668] gi|126451011|ref|YP_001081125.1| histidine ABC transporter, permease protein HisM [Burkholderia mallei NCTC 10247] gi|126454024|ref|YP_001065373.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 1106a] gi|134281215|ref|ZP_01767924.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 305] gi|166999940|ref|ZP_02265769.1| histidine ABC transporter, permease protein HisM [Burkholderia mallei PRL-20] gi|167718614|ref|ZP_02401850.1| histidine transport system permease protein [Burkholderia pseudomallei DM98] gi|167737642|ref|ZP_02410416.1| histidine transport system permease protein [Burkholderia pseudomallei 14] gi|167814777|ref|ZP_02446457.1| histidine transport system permease protein [Burkholderia pseudomallei 91] gi|167823231|ref|ZP_02454702.1| histidine transport system permease protein [Burkholderia pseudomallei 9] gi|167851713|ref|ZP_02477221.1| histidine transport system permease protein [Burkholderia pseudomallei B7210] gi|167900310|ref|ZP_02487711.1| histidine transport system permease protein [Burkholderia pseudomallei 7894] gi|167908462|ref|ZP_02495667.1| histidine transport system permease protein [Burkholderia pseudomallei NCTC 13177] gi|167916790|ref|ZP_02503881.1| histidine transport system permease protein [Burkholderia pseudomallei 112] gi|167918056|ref|ZP_02505147.1| histidine transport system permease protein [Burkholderia pseudomallei BCC215] gi|217419487|ref|ZP_03450993.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 576] gi|226194407|ref|ZP_03790005.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei Pakistan 9] gi|237811357|ref|YP_002895808.1| histidine ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|242316832|ref|ZP_04815848.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 1106b] gi|254178338|ref|ZP_04884993.1| histidine ABC transporter, permease protein HisM [Burkholderia mallei ATCC 10399] gi|254181370|ref|ZP_04887967.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 1655] gi|254190770|ref|ZP_04897277.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei Pasteur 52237] gi|254196811|ref|ZP_04903235.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei S13] gi|254199420|ref|ZP_04905786.1| histidine ABC transporter, permease protein HisM [Burkholderia mallei FMH] gi|254205735|ref|ZP_04912087.1| histidine ABC transporter, permease protein HisM [Burkholderia mallei JHU] gi|254260887|ref|ZP_04951941.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 1710a] gi|254298303|ref|ZP_04965755.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 406e] gi|254357892|ref|ZP_04974165.1| histidine ABC transporter, permease protein HisM [Burkholderia mallei 2002721280] gi|52209085|emb|CAH35026.1| histidine transport system permease protein [Burkholderia pseudomallei K96243] gi|52428581|gb|AAU49174.1| amino acid ABC transporter, permease protein [Burkholderia mallei ATCC 23344] gi|121230084|gb|ABM52602.1| histidine ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|124294380|gb|ABN03649.1| histidine ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126220268|gb|ABN83774.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 668] gi|126227666|gb|ABN91206.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 1106a] gi|126243881|gb|ABO06974.1| histidine ABC transporter, permease protein HisM [Burkholderia mallei NCTC 10247] gi|134247521|gb|EBA47606.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 305] gi|147749016|gb|EDK56090.1| histidine ABC transporter, permease protein HisM [Burkholderia mallei FMH] gi|147753178|gb|EDK60243.1| histidine ABC transporter, permease protein HisM [Burkholderia mallei JHU] gi|148027019|gb|EDK85040.1| histidine ABC transporter, permease protein HisM [Burkholderia mallei 2002721280] gi|157808288|gb|EDO85458.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 406e] gi|157938445|gb|EDO94115.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei Pasteur 52237] gi|160699377|gb|EDP89347.1| histidine ABC transporter, permease protein HisM [Burkholderia mallei ATCC 10399] gi|169653554|gb|EDS86247.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei S13] gi|184211908|gb|EDU08951.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 1655] gi|217396791|gb|EEC36807.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 576] gi|225933492|gb|EEH29481.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei Pakistan 9] gi|237503007|gb|ACQ95325.1| histidine ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|238520467|gb|EEP83927.1| histidine transport system permease protein HisM [Burkholderia mallei GB8 horse 4] gi|242140071|gb|EES26473.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 1106b] gi|243064058|gb|EES46244.1| histidine ABC transporter, permease protein HisM [Burkholderia mallei PRL-20] gi|254219576|gb|EET08960.1| histidine ABC transporter, permease protein HisM [Burkholderia pseudomallei 1710a] Length = 237 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 17/211 (8%) Query: 5 WFN-LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W N L D + + + +T+ + +S I + +AV R+ + + Y + Sbjct: 9 WRNYLYTDGYR---FTGLAITMWLLVVSIGIGFCLSVPLAVARVSKKKWLAGAVW-LYTY 64 Query: 64 IFRGTPLLVQLFVIFYGL---------PHIGIVF-DSFVAIIISLTLNFSAYISEIIRSS 113 +FRGTPL VQL + + GL P + F D +++ TLN AY +EI + Sbjct: 65 VFRGTPLYVQLLLCYTGLYSLQAVRGTPMLDAFFRDGMNCTLLAFTLNTCAYTTEIFAGA 124 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIP 172 I + G+ +A+ A G++ R I+LP + A+PL S+E I +L +T+VA T T+P Sbjct: 125 IKATSYGEIEAARAYGMSTFTLYRRIVLPSALR-RALPLYSNEVILMLHATTVAFTATVP 183 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +I + A+ + S TY + A +YL ++ Sbjct: 184 DILKIARDVNSATYMSFHAFGIAALLYLAIS 214 >gi|289168424|ref|YP_003446693.1| ABC-type amino acid transporter, membrane-spanning permease [Streptococcus mitis B6] gi|307704347|ref|ZP_07641264.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK597] gi|288907991|emb|CBJ22831.1| ABC-type amino acid transporter, membrane-spanning permease [Streptococcus mitis B6] gi|307622107|gb|EFO01127.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK597] Length = 219 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 11/192 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +TL I+ I+ V+S +IG +AV+R + ++ +I Y+ R P L+ +F Sbjct: 16 IFKGFGLTLYISLIAIVLSTLIGTVLAVMR-NGKNPVLRIISSIYIEFVRNVPNLLWIFT 74 Query: 77 IFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF +VF S A I + TL SA ++EIIR + ++ KGQ++A + G T Q Sbjct: 75 IF-------LVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQ 127 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYC 193 + HIILPQ I + S+F++++K TS+ S I + E+F +Q ++ ++P ++ Sbjct: 128 ILYHIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFEPEQVFS 187 Query: 194 ELAFVYLILTSF 205 + LI SF Sbjct: 188 LYILIALIYFSF 199 >gi|163853362|ref|YP_001641405.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium extorquens PA1] gi|240140778|ref|YP_002965258.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Methylobacterium extorquens AM1] gi|254563288|ref|YP_003070383.1| glutamate/aspartate ABC transporter permease [Methylobacterium extorquens DM4] gi|163664967|gb|ABY32334.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium extorquens PA1] gi|240010755|gb|ACS41981.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Methylobacterium extorquens AM1] gi|254270566|emb|CAX26569.1| glutamate/aspartate transport protein, ABC superfamily, permease component [Methylobacterium extorquens DM4] Length = 230 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 109/205 (53%), Gaps = 16/205 (7%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH---FYVW 63 +++ +S P L +V TL + ++ +++G +A++R+ + + + H FYV Sbjct: 8 SVVANSLPYLFGEGMVFTLTLTALAASGGIVLGTGLALLRL----SGVPGLTHAAKFYVE 63 Query: 64 IFRGTPLLVQLFVIFYGLPHIG---------IVFDSFVAIIISLTLNFSAYISEIIRSSI 114 + R PL++ +F ++ +P++G I +F + +++ TL +AY SEI+R+ I Sbjct: 64 LMRSLPLVLVIFWFYFLVPYLGAWAIGADTPIQVGAFASALVTFTLFEAAYFSEIVRAGI 123 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 SIPKGQ A+ A+G++ Q +R ++LPQ L ++ I + + TS+ +++ + Sbjct: 124 QSIPKGQSAAARALGMSYAQVMRLVVLPQAFRNMVPLLLTQTIVLFQDTSLVYVLSLTDF 183 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVY 199 A ++ + + +Y A VY Sbjct: 184 LGAASKVAQRDGRLVEMYLFAALVY 208 >gi|260467393|ref|ZP_05813565.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259028853|gb|EEW30157.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 237 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 79/147 (53%), Gaps = 3/147 (2%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 +R + +++ LF +Y LP +G+ + + L LN Y S+ +R+ + S+P GQ +A Sbjct: 75 WRSSAVVILLFFFYYVLPVMGVALSALTVSALVLGLNTGGYASQAVRAGLQSLPAGQREA 134 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 A+GL+R + I LPQ + + + I ++K+TS+ S +T+ ++ A+ I T Sbjct: 135 GMALGLSRPAILLLIELPQALVAMSPTFVNNLIQLVKATSLVSLVTLTDMTFRAKEIAQT 194 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQI 211 Y P+ IY L + ++ CY I + Sbjct: 195 NYDPVAIYSALLLAFFVV---CYPIAL 218 >gi|170698478|ref|ZP_02889550.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170136649|gb|EDT04905.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 237 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 13/183 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-----PHI 84 V+S+ GF +AV I S+ IS + Y ++FRGTPL VQL + + G+ H Sbjct: 31 VVSIAFGFALAVPLAIARASSNRWISGPVWLYTYVFRGTPLYVQLLMCYTGIYSLQVVHN 90 Query: 85 GIVFDSFVAIIISLTL-----NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 ++ D+F ++ TL N AY +EI +I + G+ +A A G++R + I Sbjct: 91 HVLLDTFFRNAMNCTLLAFVLNECAYATEIFAGAIKATSAGEIEAGMAYGMSRFKLYTRI 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 +LP + S S+E I +L +T++A T T+P+I + + + S TY Y A +Y Sbjct: 151 VLPSALRRSLPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYMSFQAYGIAAVLY 210 Query: 200 LIL 202 I+ Sbjct: 211 AIV 213 >gi|153952480|ref|YP_001398011.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. doylei 269.97] gi|152939926|gb|ABS44667.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. doylei 269.97] Length = 219 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 93/169 (55%), Gaps = 1/169 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L + +TL IA + +IS++ G F+A+ + + D + + Y+ IFR TPLL+ + Sbjct: 11 QFLMQGLFLTLKIALATCIISIVFGTFLAITKNY-GDRLSKFLAACYIDIFRNTPLLLWM 69 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 + LP F I +L S+ ++EIIR + SIPKGQ++A+Y+ G + Sbjct: 70 LAACFVLPVFFGQFPQAFWGTIGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGFGKFF 129 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 T+ +IILPQT L S+ ++ +K T+ + + I E+ ++ I++ Sbjct: 130 TLFYIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAELTYNSKTILA 178 >gi|330966764|gb|EGH67024.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 229 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/215 (25%), Positives = 106/215 (49%), Gaps = 13/215 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 +TL +A S +++++G +R+ I+ + Y + RG P LV + +IFYG Sbjct: 15 LTLQLALSSMALAIVLGLIGVALRLS-PVRWIAWLGDLYSTVVRGIPDLVLILLIFYGGQ 73 Query: 81 ------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P +G I D +A I +L F AY+SE R + ++IPKGQ +A A GL Sbjct: 74 DLLNRVAPLLGFDDYIDLDPLLAGICTLGFIFGAYLSETFRGAFMAIPKGQAEAGMAYGL 133 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + + I++PQ I + ++ ++ + K+T++ S + + ++ A++ T + Sbjct: 134 SSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATRETFT 193 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + +A +YL++TS + +E + + D Sbjct: 194 FFLAVAAMYLVITSVSLLALRYLEKRYSAGVRAAD 228 >gi|254509570|ref|ZP_05121637.1| glutamine ABC transporter permease protein [Rhodobacteraceae bacterium KLH11] gi|221533281|gb|EEE36269.1| glutamine ABC transporter permease protein [Rhodobacteraceae bacterium KLH11] Length = 269 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 11/202 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM--HFYVWIFR 66 ++ +FP+LL A + + AC + I+ I+G IA+ R S + L + + IFR Sbjct: 53 LVKTFPKLLEAFRINVMIFACSAPAIA-ILGLLIALARDAKSPALFPLRIFGAAFTDIFR 111 Query: 67 GTPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 G P+++ +++I +G+P +G+ ++ ++L L +SAY++EI RS I S+ Q Sbjct: 112 GVPVILTVYLIGFGIPGLGLPRPWNSPYIWGSLALILTYSAYVAEIFRSGIDSVHHSQRA 171 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++GL+ +Q +R ++LPQ I + I++ K S+ S I EIF+ A S Sbjct: 172 AALSLGLSERQVMRDVVLPQAIRNVVPSQMNMLIALQKDVSLLSFIGPVEIFRQAGVFKS 231 Query: 184 --TTYQPLIIYCELAFVYLILT 203 + P Y A ++LI+T Sbjct: 232 LLANFTP---YVGAAIIFLIVT 250 >gi|50085184|ref|YP_046694.1| glutamate/aspartate ABC transporter membrane protein [Acinetobacter sp. ADP1] gi|49531160|emb|CAG68872.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Acinetobacter sp. ADP1] Length = 225 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 98/181 (54%), Gaps = 15/181 (8%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + TL + ++ + ++IG +A++R+ ++ + S FYV +FRG PL+ +F+ Sbjct: 15 LSEGFIFTLTVTVLAMIGGIVIGTPLAMMRLS-NNVVASNFAKFYVDVFRGIPLIQVIFI 73 Query: 77 IFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 ++ LP + G +F S +I+ + +A+ SEI+RS I S+ +GQ +A YA Sbjct: 74 FYFLLPKVFEFQSDTYWGPLFSS----VITFAIFEAAFFSEIVRSGIQSVSRGQVNAGYA 129 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +G T Q++++++LPQ L ++ I + + S+ I+ P+ A + + TY Sbjct: 130 LGFTYGQSMKYVVLPQAFRNMLPVLLTQTIILFQDVSLVYVISAPDFLGRADTL-ANTYG 188 Query: 188 P 188 P Sbjct: 189 P 189 >gi|300718307|ref|YP_003743110.1| amino acid ABC transporter permease [Erwinia billingiae Eb661] gi|299064143|emb|CAX61263.1| Amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 235 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 94/183 (51%), Gaps = 14/183 (7%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGTPL 70 P+LL A LP+ ++LI GFF+A++ ++S + YV R P+ Sbjct: 8 PELLSA-----LPLTLAIMFVALIAGFFLAIVATTLRVRRLPVLSQLADLYVSYARSVPV 62 Query: 71 LVQLFVIFYGLPHI--GIVFDSFV----AIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 ++QLFV FYGLP + G F+ A ++ L+L Y+SE++R + +++ +GQ DA Sbjct: 63 VLQLFVAFYGLPLVVSGFGLADFITANIASMVGLSLYHGGYLSEVMRPAYLAVERGQHDA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G T +Q + II PQ + + + I ++ + ++ I ++ TA I+ Sbjct: 123 ADSMGYTFRQKLTRIIGPQAVHIALPGYGNSIIYLIHNVALVMYIGAADVMATAHLIMER 182 Query: 185 TYQ 187 Y Sbjct: 183 DYN 185 >gi|312139384|ref|YP_004006720.1| glutamate ABC transporter transmembrane protein glud [Rhodococcus equi 103S] gi|325672735|ref|ZP_08152431.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] gi|311888723|emb|CBH48035.1| putative glutamate ABC transporter integral membrane subunit GluD [Rhodococcus equi 103S] gi|325556612|gb|EGD26278.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] Length = 307 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 90/164 (54%), Gaps = 6/164 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 TL A +S V +LI+G + + R+ SD + + V FR P+L+ + + Sbjct: 73 TLLAAALSIVFALILGAILGIGRL--SDHRWVRWLSGAIVEFFRAIPVLILMIFAYQAFA 130 Query: 83 HIGIVFDS---FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 G+ S A+++ LTL + I+EIIR+ I+S+PKGQ +A+ A+G+ + Q +R I Sbjct: 131 QYGVFPSSQLALAAVVVGLTLYNGSVIAEIIRAGILSLPKGQTEAASALGMRKSQMMRLI 190 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 +LPQ ITT L S+ + LK +++ I E+ ++ Q+ S Sbjct: 191 LLPQAITTMLPALVSQMVVALKDSALGYQIGYIELIRSGQQAAS 234 >gi|330837351|ref|YP_004411992.1| amino acid ABC transporter membrane protein 2, PAAT family [Spirochaeta coccoides DSM 17374] gi|329749254|gb|AEC02610.1| amino acid ABC transporter membrane protein 2, PAAT family [Spirochaeta coccoides DSM 17374] Length = 209 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 101/192 (52%), Gaps = 10/192 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D F L++ + VTL IA ++ +S + G + ++++ + ++ Y+ R PL Sbjct: 9 DVFNFLMHG-LGVTLIIAFVTIALSFVFGMILGLMKVA-GGRVARVVATVYINAVRNIPL 66 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L LF+I + + + V+ I+++T+ SA ++EI+R + I GQW+A+ A+GL Sbjct: 67 L--LFIIGF---RFTLRLPALVSAIVAMTVFTSAMVAEIVRGGLNGIAAGQWEAAKALGL 121 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS---TTYQ 187 + Q +IILPQ + VPL +F++ +K TS + I E+ I+ + Sbjct: 122 NKFQMYIYIILPQAVKKILVPLMGQFVTAIKDTSFCWIVGIEELMGAGMIIMGKFVKSSH 181 Query: 188 PLIIYCELAFVY 199 L +Y +AF+Y Sbjct: 182 VLGMYAVIAFIY 193 >gi|322388157|ref|ZP_08061761.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus infantis ATCC 700779] gi|321140829|gb|EFX36330.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus infantis ATCC 700779] Length = 266 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 31/216 (14%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI-------RIFFSDTIISLIMHFY 61 + D P+ IV LP + V G +A++ R+ F I + F+ Sbjct: 30 VFDGIPR-----IVQQLPTTLMLTVFGAFFGIMLALVFAIVKINRVRF----IYPLQAFF 80 Query: 62 VWIFRGTPLLVQLFVIFYGLP--------------HIGIVFDSFVAIIISLTLNFSAYIS 107 V +GTP+LVQL + +YG+P +I + + AI+ + N +AY S Sbjct: 81 VSFLKGTPILVQLMLTYYGIPLALKALNQQWGTSLNINAIPAATFAIV-AFAFNEAAYAS 139 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E IR++I+S+ G+ +A+ ++G+TR Q R +I+P + L + I + K TS+A Sbjct: 140 ETIRAAILSVDPGEIEAARSLGMTRGQVYRRVIIPNAAVVATPTLINSLIGLTKGTSLAF 199 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + E+F AQ + Y+ + +A VY ++ Sbjct: 200 SAGVVEVFAQAQILGGADYRYFERFISVALVYWVVN 235 >gi|300718267|ref|YP_003743070.1| polar amino acid ABC transporter innermembrane subunit [Erwinia billingiae Eb661] gi|299064103|emb|CAX61223.1| polar amino acid ABC transporter, innermembrane subunit [Erwinia billingiae Eb661] Length = 236 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 15/201 (7%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 + Y W L+ ++ Q L +V TL +A +S VI+++IG + + F + ++ Sbjct: 4 LDYSW--LLDPTYQQWLLQGVVQTLELAALSSVIAIVIGL-AGALGLTFKIAWLDALIEL 60 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGI------------VFDSFVAIIISLTLNFSAYISE 108 +V +FR TP L+Q+ ++ L IG + +F + +SL+L A E Sbjct: 61 FVELFRNTPPLLQMLFFYFTLTQIGFTATDPVTGLQVPLVSAFASATVSLSLFGGALCIE 120 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 RS ++PK +A+ ++G +R H+ P PL++ ++ K+TS AS Sbjct: 121 AFRSGFDAVPKATLEAARSLGYSRWGLFVHVQAPIASRICLPPLTNVLTNLFKTTSQASV 180 Query: 169 ITIPEIFQTAQRIVSTTYQPL 189 IT+PE+ A +I + T++ L Sbjct: 181 ITVPELMYAAGQIYNDTFRTL 201 >gi|169795314|ref|YP_001713107.1| histidine transport system permease ABC transporter membrane protein [Acinetobacter baumannii AYE] gi|213158699|ref|YP_002319997.1| histidine transport system permease protein HisM [Acinetobacter baumannii AB0057] gi|215482847|ref|YP_002325050.1| Histidine transport system permease protein hisM [Acinetobacter baumannii AB307-0294] gi|301347434|ref|ZP_07228175.1| Histidine transport system permease protein hisM [Acinetobacter baumannii AB056] gi|301512552|ref|ZP_07237789.1| Histidine transport system permease protein hisM [Acinetobacter baumannii AB058] gi|301597597|ref|ZP_07242605.1| Histidine transport system permease protein hisM [Acinetobacter baumannii AB059] gi|332850424|ref|ZP_08432744.1| histidine transport system permease protein HisM [Acinetobacter baumannii 6013150] gi|332871862|ref|ZP_08440285.1| histidine transport system permease protein HisM [Acinetobacter baumannii 6013113] gi|169148241|emb|CAM86104.1| Histidine transport system permease protein (ABC superfamily, membrane) [Acinetobacter baumannii AYE] gi|213057859|gb|ACJ42761.1| histidine transport system permease protein HisM [Acinetobacter baumannii AB0057] gi|213988857|gb|ACJ59156.1| Histidine transport system permease protein hisM [Acinetobacter baumannii AB307-0294] gi|332730695|gb|EGJ62006.1| histidine transport system permease protein HisM [Acinetobacter baumannii 6013150] gi|332731191|gb|EGJ62491.1| histidine transport system permease protein HisM [Acinetobacter baumannii 6013113] Length = 237 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 99/185 (53%), Gaps = 15/185 (8%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVW----IFRGTPLLVQLFVIFYGLP-----H 83 V+S+ IGF +AV + + ++ +H VW +FRGTPL +QL +I+ G+ H Sbjct: 31 VLSIGIGFVLAV-PLSLARVSENIWLHGPVWLFTYVFRGTPLYIQLLIIYSGIYSFDYIH 89 Query: 84 IGIVFDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 D+F I++ LN SAY +EI +I SIP G+ +A+ A G+++ + Sbjct: 90 EHQTLDAFFREGINCTILAFALNTSAYTTEIFAGAIRSIPHGEIEAAQAFGMSKWKLYTR 149 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 II+P + + +E I +L +T++A T T+P+I + A+ + + TY + A + Sbjct: 150 IIIPSMLRRALPFYGNEVILMLHATTIAFTATVPDILKIARDVNAATYDTFSAFGIAAVL 209 Query: 199 YLILT 203 Y +L Sbjct: 210 YAVLA 214 >gi|322614884|gb|EFY11809.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619324|gb|EFY16204.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623136|gb|EFY19978.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628426|gb|EFY25214.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634833|gb|EFY31564.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638602|gb|EFY35297.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641009|gb|EFY37656.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645408|gb|EFY41936.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651707|gb|EFY48079.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654392|gb|EFY50714.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661233|gb|EFY57459.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665007|gb|EFY61195.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667751|gb|EFY63911.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671837|gb|EFY67958.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677117|gb|EFY73181.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680220|gb|EFY76259.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685351|gb|EFY81347.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194286|gb|EFZ79482.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198155|gb|EFZ83265.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204387|gb|EFZ89395.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205836|gb|EFZ90799.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211048|gb|EFZ95905.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217165|gb|EGA01886.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222864|gb|EGA07222.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227241|gb|EGA11411.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323234552|gb|EGA18639.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238005|gb|EGA22064.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243394|gb|EGA27413.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248904|gb|EGA32829.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253702|gb|EGA37529.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258736|gb|EGA42395.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261768|gb|EGA45338.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266515|gb|EGA50002.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271239|gb|EGA54666.1| putative ABC transporter permease component [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 215 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 98/186 (52%), Gaps = 1/186 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L I TL + F+ + G +AV+R S + I+ V+I RG P+L+ +F+ Sbjct: 13 LLEGIGNTLLVTFTCFLSAFFTGLTVAVLR-RLSPLPLQKILDAMVFILRGIPILIAVFL 71 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GLP IGI VA+ +S+ L +Y++E+ R ++ + + + G+ + Q I Sbjct: 72 VYFGLPSIGIYVSPLVAMNLSVGLISGSYLAEVFRGALKLVEPFEITVAKVAGMRQLQII 131 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELA 196 +I LPQ + S + +EF S+LK+T A T+ I EI + A + + T L IY Sbjct: 132 LNIELPQMLRFSVPGIINEFSSVLKATPFAYTVGIAEITKQAMSLTAITLNGLQIYTLAG 191 Query: 197 FVYLIL 202 +Y I+ Sbjct: 192 VLYFII 197 >gi|170743938|ref|YP_001772593.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168198212|gb|ACA20159.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 385 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 6/203 (2%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 I++ P L+ ++VT+ ++ + V SL +G +A+ R I+ L ++ +RG P Sbjct: 165 IETVPTSLWGGMLVTIVVSLVGIVASLPLGILLALGRRS-RLPIVRLACVIFIEFWRGVP 223 Query: 70 LLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 L+ LF+ LP I D + +I + L +AY++E++R + +IPKGQ + + Sbjct: 224 LITVLFMANVMLPLFLPGDITVDRLLRPLIGVALFSAAYMAEVVRGGLQAIPKGQTEGAN 283 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT--AQRIVST 184 ++GL+ Q +R +ILPQ + + + FI++ K T++ S + I + +T + RI Sbjct: 284 SLGLSYWQGMRLVILPQALRIVIPGIVNSFIALFKDTTLVSIVGIFDFIRTIESARIDPN 343 Query: 185 TYQPLIIYCELAFVYLILTSFCY 207 P ++ AF L FC+ Sbjct: 344 WAAPTVVTTGYAFAALFYFVFCF 366 >gi|33603521|ref|NP_891081.1| glutamate/aspartate transport system permease protein [Bordetella bronchiseptica RB50] gi|33577645|emb|CAE34910.1| glutamate/aspartate transport system permease protein [Bordetella bronchiseptica RB50] Length = 253 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/223 (27%), Positives = 112/223 (50%), Gaps = 22/223 (9%) Query: 1 MKYEW-FNLIIDSFP------QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI 53 M Y W +++ ++ P L + TL A ++++++L IG + V R + + Sbjct: 1 MNYNWNWHIFLEMSPTGGIYLGTLLTGMAWTLGTAALAWILALGIGIVVGVART--TQSK 58 Query: 54 ISLIMHF-YVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDS-------FVAIIISLTL 100 + IM YV FR PLLVQ+F+ ++ +P I G S F+ ++ L Sbjct: 59 WARIMGATYVEFFRNIPLLVQMFLWYFVVPEILPVQLGDAIKSIPPPWGIFIPAVLCLGF 118 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 S+ ++E +R+ I S P GQ A+ A+G+ Q R+++LP + PL+SE ++++ Sbjct: 119 YTSSRVAEQVRAGIESRPAGQRMAATALGMRPSQVYRYVLLPTSFRIILPPLTSELLNLI 178 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 K+TSVA TI + E+ A+ + ++Q + Y +L Sbjct: 179 KNTSVAFTIGLLELVGAARSMQEFSFQVFEAFAGATLCYFLLN 221 >gi|27376791|ref|NP_768320.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110] gi|27349933|dbj|BAC46945.1| blr1680 [Bradyrhizobium japonicum USDA 110] Length = 220 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 91/167 (54%), Gaps = 1/167 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L +++VTL I+ ++ +++ I+G IA + + T + YV +FRG P L+ L Sbjct: 12 LGKSLLVTLWISLLTVILATILGLLIAALSQS-TLTFARFVGRLYVELFRGVPSLMILLF 70 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +F+ LP IG+ A II L L A I E+ R ++ SIP Q + A+GL+ + + Sbjct: 71 VFFALPQIGLRTGPLTAAIIGLGLWGGANIGEVFRGALDSIPHRQEQGARALGLSATEAL 130 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 +ILPQ + P + +++++++ S + + ++ +A++++ Sbjct: 131 VFVILPQAFRRALPPYVGQLTVLVQASALTSVVGVSDLLGSARQMIE 177 >gi|330807873|ref|YP_004352335.1| histidine ABC transporter permease protein component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375981|gb|AEA67331.1| histidine ABC transporter, permease protein component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 236 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 95/182 (52%), Gaps = 13/182 (7%) Query: 35 SLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV---- 87 SL+IGF +++ I + + FY ++FRGTPL +QL + + G+ I V Sbjct: 33 SLLIGFLVSIPLSIARVSPKFYVRWPVQFYTYLFRGTPLYIQLLICYTGIYSIAAVRAQP 92 Query: 88 -FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 DSF I++ LN AY +EI +I S+ G+ +A+ A GLT + ++I+ Sbjct: 93 MLDSFFRDAMNCTILAFALNTCAYTTEIFAGAIRSMNHGEVEAAKAYGLTGWKLYTYVIM 152 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 P + S S+E I +L ST+VA T T+P++ + A+ S T+ + A +YL Sbjct: 153 PSALRRSLPYYSNEVILMLHSTTVAFTATVPDVLKVARDANSATFLTFQSFGIAALIYLT 212 Query: 202 LT 203 +T Sbjct: 213 VT 214 >gi|260662189|ref|ZP_05863085.1| ABC transporter permease component [Lactobacillus fermentum 28-3-CHN] gi|260553572|gb|EEX26464.1| ABC transporter permease component [Lactobacillus fermentum 28-3-CHN] Length = 223 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/193 (30%), Positives = 110/193 (56%), Gaps = 15/193 (7%) Query: 1 MKYEWFNLIID--SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 M + N++++ +F +L+ + V++ IA +S LI+G V+R S ++ I+ Sbjct: 1 MAHSGINVLLEGSNFSRLM-GGLWVSVWIAVVSLFFGLIVGTVFGVLRTTKSR-VLRFIL 58 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 Y+ IFR P +V LF+++Y LP HI + D +++ +L +A S+I+R +I Sbjct: 59 RLYLEIFRIIPTVVLLFLVYYILPRQLHINMPADWMA--VLAFSLWVAAEFSDIVRGAIQ 116 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTIT---TSAVPLSSEFISILKSTSVASTITIP 172 S+P+ Q ++ AIGLTR Q R+I+LPQ + +A+ L++ ++K+TS+ I+I Sbjct: 117 SVPQHQRESGLAIGLTRFQLFRYILLPQAMKLEVPAAINLATR---VVKTTSLLMIISIM 173 Query: 173 EIFQTAQRIVSTT 185 ++ Q+I+ Sbjct: 174 DVINVGQQIIEAN 186 >gi|190894984|ref|YP_001985277.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|218516890|ref|ZP_03513730.1| putative amino acid ABC transporter, permease protein [Rhizobium etli 8C-3] gi|190700645|gb|ACE94727.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 220 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 97/178 (54%), Gaps = 2/178 (1%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 V+L + + +I +++GF +A++ I I+ L +V FR TP +VQ+ IFY +P Sbjct: 21 VSLQLTAAANIIGIVLGFGLALL-IMSPIKIVRLPFMLFVEFFRCTPAIVQIVWIFYCVP 79 Query: 83 HIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + VF D I++L LN A+ +E R+SI ++P+ Q DA A+GL Q + +I+ Sbjct: 80 MLFDVFLDPMTMGIMALGLNLMAFNAEAYRASIQAVPREQLDAGIALGLNPLQRVLYIVF 139 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 P S L + I I + +++ + + I ++ + + + TY+P+ + +A +Y Sbjct: 140 PTAFRASIPVLLTNGIVIFQQSALVAIVAIQDLMYQGKTLATETYRPIETFTVVALIY 197 >gi|116326668|ref|YP_796442.1| ABC-type amino acid transport system, permease component [Lactobacillus casei ATCC 334] gi|116106486|gb|ABJ71627.1| ABC-type amino acid transport system, permease component [Lactobacillus casei ATCC 334] Length = 229 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 100/177 (56%), Gaps = 7/177 (3%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 +F +LL + VT+ IA ++ ++ LI+G + V+R F + + +++ Y+ FR P + Sbjct: 14 NFERLL-GGLWVTVKIAAVALIVGLILGIILGVLRTF-KNRPLRVVLRLYLEFFRIVPTV 71 Query: 72 VQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 V LF+ +Y LP + + D ++ +L + +A +S+I+R ++ S+P+ Q ++ AI Sbjct: 72 VLLFLFYYILPRQLNFNLPGDQLATLVFALWV--AAEMSDIVRGALSSVPQHQRESGKAI 129 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 GL R Q R++++PQ I+ + ++K+TS+ I++ ++ Q+I+ Sbjct: 130 GLNRYQLYRYVLIPQAISLEIPATINLATRVIKTTSLLMLISVMDVINIGQQIIEAN 186 >gi|253690633|ref|YP_003019823.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251757211|gb|ACT15287.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 242 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/218 (24%), Positives = 114/218 (52%), Gaps = 9/218 (4%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ +FP+ +TL ++ ++ V S +G + V + S + S ++ + FR Sbjct: 13 LMWGTFPEGPLGGAALTLLMSLLAGVASAALGTILGVA-LAMSRGVWSALLAMVLGFFRA 71 Query: 68 TPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P+++ +F ++ LP + G+ ++ +L L SAY++ +++ I++I +GQW A Sbjct: 72 IPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHGVKAGIVAIGRGQWQAGL 131 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVSTT 185 ++GL+R Q + I+LPQ + +++IS++K TS+A + + E+ F Q + Sbjct: 132 SLGLSRWQVLWQIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQVNNRSM 191 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQI---KIESSVTQH 220 P+ ++ +A VY + FC +++ ++ + Q Sbjct: 192 VYPMEVFLFVALVYFV---FCLSLELLANRVNARFNQQ 226 >gi|238765551|ref|ZP_04626464.1| ABC-type amino acid transport system permease component [Yersinia kristensenii ATCC 33638] gi|238696229|gb|EEP89033.1| ABC-type amino acid transport system permease component [Yersinia kristensenii ATCC 33638] Length = 251 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 106/201 (52%), Gaps = 3/201 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ +FP +TL I+ ++ V S I+G + V+ + S + + I+ ++ Sbjct: 9 NWTYLLWGTFPDGPLGGAALTLLISLLAGVASAILGTVLGVV-LAMSSGVWAGILAAFLG 67 Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FR P+++ +F ++ LP + G+ ++ +L L SAY++ +++ I++I GQW Sbjct: 68 FFRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIMAIGAGQW 127 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRI 181 A ++G R Q + ++LPQ + +++IS++K TS+A + + E+ F Q Sbjct: 128 QAGLSLGFNRWQVLWFVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQVN 187 Query: 182 VSTTYQPLIIYCELAFVYLIL 202 + P+ ++ +A VY +L Sbjct: 188 NRSMVYPMEVFLFVALVYFVL 208 >gi|289825679|ref|ZP_06544850.1| putative ABC amino acid transporter permease [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 212 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 1/176 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L I TL + F+ + + G +AV+R S + I+ V+I RG P+L+ +F+ Sbjct: 8 LLEGIGNTLLVTFTCFLSAFLTGLTVAVLR-RLSPLPLQKILDVLVFILRGIPILIAVFL 66 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 +++GLP IGI VA+ +S+ L +Y++E+ R ++ + + + G+ + Q I Sbjct: 67 VYFGLPSIGIYVSPLVAMNLSVGLISGSYLAEVFRGALKLVEPFEITVAKVAGMRQLQVI 126 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +I LPQ + S + +EF S+LK+T A T+ I EI + A + + T L IY Sbjct: 127 INIELPQMLRFSVPGIINEFSSVLKATPFAYTVGIAEITKQAMSLTAITLNGLQIY 182 >gi|330981546|gb|EGH79649.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 242 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 11/166 (6%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH-IGIVFDS----------FVAIIISL 98 S ++ + Y + RG P LV + +IFY L + ++ D+ F A +I+L Sbjct: 55 SSALLRVPAQIYTTLIRGVPDLVLMLLIFYSLQTWLTMLTDAMEWEYIEINPFGAGVITL 114 Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158 + AY +E R +I+S+P+GQ +A+ A GL R Q R+++ PQ + + + + + Sbjct: 115 GFIYGAYFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQV 174 Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 +LK+T++ S I + ++ + +Q +TYQ A +YL++TS Sbjct: 175 LLKATALVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYLLITS 220 >gi|322392218|ref|ZP_08065679.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus peroris ATCC 700780] gi|321144753|gb|EFX40153.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus peroris ATCC 700780] Length = 266 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 29/215 (13%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVI-------RIFFSDTIISLIMHFY 61 + D P+ IV LP + V G +A+I R+ F I + F+ Sbjct: 30 VFDGIPR-----IVQQLPTTLMLTVFGAFFGIMLALIFAIVKINRVRF----IYPLQAFF 80 Query: 62 VWIFRGTPLLVQLFVIFYGLP--------HIGIVFD-----SFVAIIISLTLNFSAYISE 108 V +GTP+LVQL + +YG+P G + + I++ N +AY SE Sbjct: 81 VSFLKGTPILVQLMLTYYGIPLALKALNQQWGTALNINAIPAATFAIVAFAFNEAAYASE 140 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 +R++I+S+ G+ +A+ ++G+TR Q R +I+P + L + I + K TS+A + Sbjct: 141 TLRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKGTSLAFS 200 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + E+F AQ + Y+ + +A VY ++ Sbjct: 201 AGVVEVFAQAQILGGADYRYFERFISVALVYWVVN 235 >gi|160901202|ref|YP_001566784.1| polar amino acid ABC transporter inner membrane protein [Delftia acidovorans SPH-1] gi|160366786|gb|ABX38399.1| polar amino acid ABC transporter, inner membrane subunit [Delftia acidovorans SPH-1] Length = 273 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 109/218 (50%), Gaps = 16/218 (7%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 P LL ++V + I+ ++ I + G + + + + + + + +YV +FR P+LV Sbjct: 59 LPALLRG-LLVNIEISVLAVAIGTVAGLVLGALSLSPTPAVRTGV-RWYVQLFRNAPILV 116 Query: 73 QLFVIFYGLP-HIGIV-----FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 ++ Y P + +V F +V +++ L L SA ++EI R +I SIP QW+A+ Sbjct: 117 LIYFTTYVFPFELKLVGWTFPFPDWVKVVLGLALPTSANVAEIFRGAIQSIPSAQWEAAQ 176 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ----RIV 182 ++ R + R I+LPQ + P + + SI STS+AS + + ++ TAQ + Sbjct: 177 SLAFRRSEIFRLIVLPQCVRRMLPPWMNLYASITMSTSLASLVGVHDVVDTAQIASNTVA 236 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T + L+ + LA + ++CY I + +H Sbjct: 237 RTDFTILVYFTLLALFF----AYCYPIARATRALERRH 270 >gi|254255036|ref|ZP_04948353.1| ABC-type arginine/histidine transport system permease component [Burkholderia dolosa AUO158] gi|124899681|gb|EAY71524.1| ABC-type arginine/histidine transport system permease component [Burkholderia dolosa AUO158] Length = 236 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 13/183 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+S+++GF +AV I S+ I+ + Y ++FRGTPL VQL + + G+ + +V D Sbjct: 31 VVSIVLGFALAVPLAIARASSERWIAGPVWLYTYVFRGTPLYVQLLMCYTGIYSLQVVHD 90 Query: 90 ----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + +++ LN AY +EI +I + G+ +A A G++R + I Sbjct: 91 HVLLDTFFRDAMNCTLLAFVLNECAYATEIFAGAIKATAAGEIEAGVAFGMSRVKLYTRI 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ++P + S S+E I +L +T++A T T+P+I + + + S TY Y A +Y Sbjct: 151 VVPSALRRSLPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYMSFQAYGIAAVLY 210 Query: 200 LIL 202 ++ Sbjct: 211 AVV 213 >gi|297160232|gb|ADI09944.1| amino acid ABC transporter permease protein [Streptomyces bingchenggensis BCW-1] Length = 250 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 7/180 (3%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEII 110 I+ + YV IFRGT LV +F +F+ +P +G F A +++L L + AY SEI+ Sbjct: 45 IVRFLTGCYVEIFRGTSALVLMFWLFFVMP-LGFQFQLLPMWAAVLALGLTYGAYGSEIV 103 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R +I ++ Q +A+ A+ T Q +R +ILPQ I P ++ I +LK+T++ S ++ Sbjct: 104 RGAIGAVAPAQREAAIALSFTPAQRMRRVILPQAIPEMIPPFNNLLIELLKATALVSAVS 163 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVY----LILTSFCYIIQIKIESSVTQHTYSVDK 226 + +I AQ T L IY + +Y +LT +++ + ++ + Q K Sbjct: 164 VADITFAAQLSRLATGDSLEIYSIILVLYFVLAFVLTRLMRLLERRAKAGIGQAPERRRK 223 >gi|257126581|ref|YP_003164695.1| polar amino acid ABC transporter inner membrane protein [Leptotrichia buccalis C-1013-b] gi|257050520|gb|ACV39704.1| polar amino acid ABC transporter, inner membrane subunit [Leptotrichia buccalis C-1013-b] Length = 237 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 16/210 (7%) Query: 24 TLPIACISFVISLIIGFFIAVIRI---------FFSDTIISLIMHFYVWIFRGTPLLVQL 74 TL IA IS +++IG + I F+ + I Y+ + RGTPLLVQ Sbjct: 26 TLLIAAISLFFAVLIGIGVGYINFVPTKKKNFNFYLIKTLQWIGKEYIDLIRGTPLLVQA 85 Query: 75 FVIFYGL-PHIGIVFDSF------VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 ++G+ P I F + +A +I ++LN A+++EI R I +I GQ +A+ + Sbjct: 86 IFFYFGVVPIINKAFLNGQQMSPEIAGVIIISLNAGAFLAEIFRGGIQAIDTGQMEAARS 145 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GL+ + +R +ILPQ I + ++FI+ LK TS+ I + ++ Q T Y+ Sbjct: 146 LGLSFGKAMRKVILPQAIKNMIPAILNQFITSLKDTSLLMVIGVADLMGKGQIAFKTNYK 205 Query: 188 PLIIYCELAFVYLILTSFCYIIQIKIESSV 217 +A +Y ++ + KIE + Sbjct: 206 TFETMLIIALIYYLVIKILSTLFKKIEGKL 235 >gi|323339555|ref|ZP_08079830.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ruminis ATCC 25644] gi|323093035|gb|EFZ35632.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ruminis ATCC 25644] Length = 227 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 107/193 (55%), Gaps = 14/193 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + ++ IA +S L++G F+ V+R + ++ +++ Y+ FR P +V LF+ Sbjct: 18 LMGGLWTSVWIAGVSLGFGLLLGTFLGVLRTL-KNAVLRIVLRLYLEFFRIVPTIVLLFL 76 Query: 77 IFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 ++Y LP H+ + + +++ +L SA S+I+R ++ S+PK Q +A A+GLT+ Sbjct: 77 VYYILPRQFHVEVSAEWMA--VLAFSLWVSAEFSDIVRGALESVPKHQREAGLALGLTKG 134 Query: 134 QTIRHIILPQTIT---TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--P 188 Q H+++PQ +A+ L++ ++K+TS+ I++ ++ Q+I+ Q P Sbjct: 135 QLFVHVLMPQAFMLELPAAINLATR---VVKTTSLLMIISVMDVINVGQQIIEANNQQYP 191 Query: 189 LIIYCELAFVYLI 201 ++ F++++ Sbjct: 192 SGVFWIYGFIFML 204 >gi|134295205|ref|YP_001118940.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia vietnamiensis G4] gi|134138362|gb|ABO54105.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia vietnamiensis G4] Length = 229 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 107/217 (49%), Gaps = 16/217 (7%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F +L+A V T+ ++ +S ++ +G AV ++ + ++ I Y + R P L Sbjct: 5 GFGPVLWAGTVQTIELSVLSLATAVALGLIGAVAKLS-HNRVLRAIATGYTTLIRSVPDL 63 Query: 72 VQLFVIFY-------------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 V + ++FY G I I D FVA +++L + AY +E R + +S+P Sbjct: 64 VLMLLLFYSIQIWLNQFTDLLGWDQIDI--DPFVAGVLTLGFIYGAYFTETFRGAFLSVP 121 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + A Sbjct: 122 RGQLEAGAAYGMSGARVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAA 181 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q +T+ A +YL +T+ ++ I++E Sbjct: 182 QDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLEK 218 >gi|251783113|ref|YP_002997416.1| truncated amino acid ABC transporter permease [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391743|dbj|BAH82202.1| truncated amino acid ABC transporter permease protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 267 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 16/210 (7%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W + + D+ P ++ + +TL + V LI+ A+++I I+ I +V Sbjct: 26 FSW-HAVFDAIPNII-QRLPITLGLTLAGAVFGLILALIFAIVKIN-KVKILYPIQAVFV 82 Query: 63 WIFRGTPLLVQLFVIFYGLP------HIGIVFD-------SFVAIIISLTLNFSAYISEI 109 RGTP+LVQL + +YG+P + FD + V I + N +AY SE Sbjct: 83 SFLRGTPILVQLMLTYYGIPLFLKFLNQKYGFDWNINAIPASVFAITAFAFNEAAYASET 142 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IR++I+S+ G+ +A+ ++G+T Q R +I+P + L + I + K TS+A Sbjct: 143 IRAAILSVDTGEIEAAKSLGMTSVQVYRRVIIPNAAVVAIPTLINGLIGLTKGTSLAFNA 202 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I E F AQ + + Y+ Y +A VY Sbjct: 203 GIVETFAQAQILGGSDYRYFERYISVALVY 232 >gi|330898558|gb|EGH29977.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] gi|330981581|gb|EGH79684.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 248 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/156 (32%), Positives = 87/156 (55%), Gaps = 15/156 (9%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI------------- 84 +G + V+R + ++S I YV IFR PLLVQLF+ ++ +P + Sbjct: 46 LGSVLGVMRTV-PNRLVSGIATVYVEIFRNVPLLVQLFIWYFLVPDLLPENLQEWYKQDL 104 Query: 85 GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQT 144 +F+++++ L L +A + E +R+ I ++PKGQ A+ A+G Q +++LPQ Sbjct: 105 NPTTSAFLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQA 164 Query: 145 ITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 165 YRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|163759018|ref|ZP_02166104.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Hoeflea phototrophica DFL-43] gi|162283422|gb|EDQ33707.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Hoeflea phototrophica DFL-43] Length = 235 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/177 (32%), Positives = 102/177 (57%), Gaps = 7/177 (3%) Query: 33 VISLIIGFFIA-VIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVF 88 +I+LI G IA VI I + ++ + Y+W+F+ PLL+ LF+I G+P I G+ Sbjct: 32 LIALIGGGLIALVITIVRTSPYLNAKRVAAGYIWLFQSVPLLMLLFLIGLGIPRILGVNV 91 Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 + ++A I+L + SAY++++ R ++ SIP GQW+ + A+GL+ + +R +ILPQ + S Sbjct: 92 NPWLAASIALVVYASAYLADVWRGAVESIPAGQWEGARALGLSFLKIVRLVILPQAVRIS 151 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS---TTYQPLIIYCELAFVYLIL 202 P + I+K TS+A I ++ +R + + +P +I+ +A +Y L Sbjct: 152 LAPTVGFTVQIIKGTSLAYIIGFYDLMSIGKRWANAPVSGTEPYVIFPLMALIYFCL 208 >gi|163760313|ref|ZP_02167396.1| amino acid ABC transporter, permease protein [Hoeflea phototrophica DFL-43] gi|162282712|gb|EDQ33000.1| amino acid ABC transporter, permease protein [Hoeflea phototrophica DFL-43] Length = 377 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 6/196 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ ++VTL +A + V+S +G +A+ R I+ + ++ +RG PL+ LF+ Sbjct: 164 LWGGLLVTLVVAIVGIVVSFPLGILLALGR-RSEMPIVKMFCIIFIEFWRGVPLITVLFM 222 Query: 77 IFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G+ FD + +I + L SAY++E+IR + +IPKGQ++A+ A+ LT Sbjct: 223 SSVMLPLFLPEGVTFDKLLRALIGVALFSSAYMAEVIRGGLQAIPKGQYEAANAMALTFW 282 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY--QPLII 191 Q R +I+PQ + + + FI + K TS+ I + ++ Q+ ++ P Sbjct: 283 QGTRLVIMPQALKLVIPGIVNTFIGLFKDTSLVLIIGLFDLLGIVQQNMNDPNWISPATP 342 Query: 192 YCELAFVYLILTSFCY 207 F L+ FC+ Sbjct: 343 ATGFVFAALVFFIFCF 358 >gi|77460512|ref|YP_350019.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77384515|gb|ABA76028.1| L-arginine ABC transporter membrane protein / L-ornithine ABC transporter membrane protein [Pseudomonas fluorescens Pf0-1] Length = 229 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/215 (24%), Positives = 106/215 (49%), Gaps = 13/215 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 +TL +A S +++++G +R+ ++ + Y + RG P LV + +IFYG Sbjct: 15 LTLQLALSSMALAIVLGLIGVALRLS-PVRWLAWLGDLYSTVIRGIPDLVLILLIFYGGQ 73 Query: 81 ------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P +G I + A I +L F AY+SE R + ++IPKGQ +A A G+ Sbjct: 74 DLLNRVAPMLGYDDYIDLNPLAAGIGTLGFIFGAYLSETFRGAFMAIPKGQAEAGMAYGM 133 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + Q +++PQ I + ++ ++ + K+T++ S + + ++ A++ T +P Sbjct: 134 SSFQVFFRVLVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATREPFT 193 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + +A +YL++TS + +E + + D Sbjct: 194 FFLAVAAMYLVITSVSLLALRHLEKRYSVGVRAAD 228 >gi|27378023|ref|NP_769552.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110] gi|27351169|dbj|BAC48177.1| blr2912 [Bradyrhizobium japonicum USDA 110] Length = 395 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 64/98 (65%) Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 + A++I+L SA+I+EI+RS I S+P+GQWDA+ A+GL R +R IILPQ + Sbjct: 263 EYFALLIALVAYTSAFIAEIVRSGIQSVPRGQWDAANALGLRRSFMLRQIILPQALRVIV 322 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 P++S+++++ K++S+A I ++ A ++ T Q Sbjct: 323 PPMTSQYLNLTKNSSLAVAIGYQDVVSVANTTLNQTGQ 360 >gi|222082566|ref|YP_002541931.1| glutamine ABC transporter [Agrobacterium radiobacter K84] gi|221727245|gb|ACM30334.1| glutamine ABC transporter [Agrobacterium radiobacter K84] Length = 510 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 14/209 (6%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W + + + P ++ + TL +A S V+ +IIG +AV+ I S + L Y Sbjct: 17 DW-DAMAEVLPSMITVGLKNTLILAAASTVLGVIIGMVLAVMGISQS-RWLRLPARIYTD 74 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 IFRG P +V + +I G IG F II+L+L AYI EI RS I S+ +G Sbjct: 75 IFRGLPAIVTILIIGQGFARIGRELFGPSPFPLGIIALSLIAGAYIGEIFRSGIQSVERG 134 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS----VASTITIPEIFQ 176 Q +A A+ ++ Q +R I++PQ + L ++FI +K +S + + EIF+ Sbjct: 135 QMEACRALSMSYGQGMRLIVIPQGVRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFR 194 Query: 177 TAQR--IVSTTYQPLIIYCELAFVYLILT 203 Q +V+ PL++ YL++T Sbjct: 195 VGQDQAVVTGNLSPLLLA---GVFYLLIT 220 >gi|104773437|ref|YP_618417.1| amino acid ABC transporter permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422518|emb|CAI97092.1| Amino acid ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 230 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 99/178 (55%), Gaps = 3/178 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L+ A + ++ IA IS +I L IG ++R ++ II ++ Y+ FR P Sbjct: 19 SNFARLM-AGLWTSIWIAAISLIIGLAIGTIFGILRTL-TNKIIRFVLRIYLEFFRIVPT 76 Query: 71 LVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +V L++++Y LP + + + +++ +L +A S+I+R +I S+PK Q ++ A+G Sbjct: 77 IVLLYLVYYILPRTFHVNWPATWMAVLAFSLWVAAEFSDIVRGAIESVPKSQRESGLALG 136 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 L++ Q R+++LPQ + + ++K+TS+ I+I E+ Q+I+ Q Sbjct: 137 LSKIQLFRYVLLPQAVKLELPATINLATRVIKTTSLLLVISIMEVINVGQQIIEANNQ 194 >gi|329944506|ref|ZP_08292671.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328530271|gb|EGF57150.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 218 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 105/200 (52%), Gaps = 5/200 (2%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + ++ TL I+ +S++ L++G +A+ R+ + +L +V + P L + ++ Sbjct: 13 SGLLATLVISVLSYLGGLVLGSLMAIFRVGPIPPLRAL-GAAWVTVACNIPNLCLMVLVG 71 Query: 79 YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 LPH GI F ++I++L + S ++ E +RS I S+ KGQ +A+ A+G+ IR Sbjct: 72 LALPHAGITIPLFWSVIVALIFSSSGFVCETVRSGINSVSKGQIEAARALGMPFGLIIRG 131 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 I+LPQ + + PL + FI+ L +S+A+ + + E+ QRI +I + Sbjct: 132 IVLPQALARTIQPLVNIFIACLIGSSLAAAVGVVELTAVTQRINQDRAAGVITFLTSGLT 191 Query: 199 YLIL----TSFCYIIQIKIE 214 YL + T +++ ++E Sbjct: 192 YLAIAFAATRLGGLLERRLE 211 >gi|86360984|ref|YP_472871.1| glutamine ABC transporter, ATP-binding protein [Rhizobium etli CFN 42] gi|86285086|gb|ABC94144.1| glutamine ABC transporter, ATP-binding protein [Rhizobium etli CFN 42] Length = 513 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 11/198 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++W + + D P ++ + TL +A S V+ +IIG +AV+ I S + L Y Sbjct: 12 FDW-SAMADVLPSMISIGLKNTLILAAASTVLGVIIGMVLAVMGISQS-RWLRLPARIYT 69 Query: 63 WIFRGTPLLVQLFVIFYGLPHIG-IVFDS--FVAIIISLTLNFSAYISEIIRSSIISIPK 119 IFRG P +V + +I G IG +F F I++L+L AYI EI RS I S+ + Sbjct: 70 DIFRGLPAIVTILIIGQGFARIGRDIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVER 129 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS----VASTITIPEIF 175 GQ +A A+ ++ Q +R I++PQ + L ++FI +K +S + + EIF Sbjct: 130 GQMEACRALSMSYGQGMRLIVIPQGVRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIF 189 Query: 176 QTAQR--IVSTTYQPLII 191 + Q +V+ PL++ Sbjct: 190 RVGQDQAVVTGNLSPLLL 207 >gi|325275177|ref|ZP_08141144.1| glutamate/aspartate ABC transporter permease [Pseudomonas sp. TJI-51] gi|324099664|gb|EGB97543.1| glutamate/aspartate ABC transporter permease [Pseudomonas sp. TJI-51] Length = 248 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/158 (32%), Positives = 91/158 (57%), Gaps = 15/158 (9%) Query: 36 LIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI---GI------ 86 L++G + V+R + ++S I YV +FR PLLVQLF+ ++ +P + G+ Sbjct: 44 LLLGSVLGVMRTV-PNRLVSGIATIYVELFRNVPLLVQLFIWYFLVPDLLPEGLQEWFKQ 102 Query: 87 ----VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + ++++I L L +A + E +R+ I ++P+GQ A+ A+G + Q +++LP Sbjct: 103 DLNPTTSALISVVICLGLFTAARVCEQVRTGIQALPRGQESAARAMGFSLPQIYTNVLLP 162 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 Q PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 163 QAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|146340848|ref|YP_001205896.1| putative amino acid ABC transport, permease [Bradyrhizobium sp. ORS278] gi|146193654|emb|CAL77671.1| putative amino acid ABC transport, permease protein [Bradyrhizobium sp. ORS278] Length = 506 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 15/218 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQ 73 L+ ++VTL + I V S+ IG +A+ R + I LI F ++ + RG PL+ Sbjct: 293 LWGGMLVTLVVTVIGIVASMPIGIALALGR----RSTIPLIRIFSIAFIELVRGVPLITV 348 Query: 74 LFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LF Y LP + D V +I + L AY++E+IR + +IP+GQ +A+ A+GL Sbjct: 349 LFFATYMLPLFLPGNLRIDGLVRALIGVALFSGAYMAEVIRGGLQAIPRGQAEAASALGL 408 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT--YQP 188 + +T I+LPQ + + + FIS+ K TS+ S + + ++ + + + P Sbjct: 409 SWWKTTSFIVLPQALRHVIPGIVNSFISLFKDTSLVSIVALFDLLGSLKASFADPVWATP 468 Query: 189 LIIYCELAFVYLILTSFCYII---QIKIESSVTQHTYS 223 + AF LI +FC+ + + +E + H + Sbjct: 469 TTAFTGFAFTGLIYFAFCFGMSRYSLLVERRLNAHRRN 506 >gi|294676009|ref|YP_003576624.1| amino acid ABC transporter permease [Rhodobacter capsulatus SB 1003] gi|294474829|gb|ADE84217.1| amino acid ABC transporter, permease protein [Rhodobacter capsulatus SB 1003] Length = 262 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 93/178 (52%), Gaps = 14/178 (7%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFY-------------GLPHIGIV-FDSFVAIIISLTLNF 102 + FY + RG P++V L + + GLP + + F +++L L + Sbjct: 79 LARFYTEVIRGVPIIVLLLYVAFALVPALVAGWNALGLPELSVRDFPLLARAVLALILAY 138 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +A+++E+ R+ +IS+ +GQ +A+ A+GL R I+ PQ T PL ++F++++K Sbjct: 139 AAFLAEVFRAGLISVERGQIEAAKALGLGGWLRFRLIVFPQAFRTVLPPLGNDFVAMVKD 198 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 +S+ S + + +I Q + + ++ Y +A +YL +T ++ K+E+ + + Sbjct: 199 SSLVSVLGVADITQLGKVTAAGNFRYFETYNVVALIYLAMTVTLSLLLRKLEAHLRKR 256 >gi|206559442|ref|YP_002230203.1| histidine transport system permease [Burkholderia cenocepacia J2315] gi|198035480|emb|CAR51358.1| histidine transport system permease protein [Burkholderia cenocepacia J2315] Length = 229 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 107/217 (49%), Gaps = 16/217 (7%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F +L+A V T+ ++ +S ++ +G AV ++ + ++ I Y + R P L Sbjct: 5 GFGPVLWAGTVQTIELSVLSLATAVALGLIGAVAKLS-HNRVLRAIATGYTTLIRSVPDL 63 Query: 72 VQLFVIFY-------------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 V + ++FY G I I D FVA +++L + AY +E R + +S+P Sbjct: 64 VLMLLLFYSIQIWLNQFTDLVGWNQIDI--DPFVAGVLTLGFIYGAYFTETFRGAFLSVP 121 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + A Sbjct: 122 RGQLEAGAAYGMSGARVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAA 181 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q +T+ A +YL +T+ ++ I++E Sbjct: 182 QDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLEK 218 >gi|262274651|ref|ZP_06052462.1| arginine/ornithine ABC transporter permease protein AotQ [Grimontia hollisae CIP 101886] gi|262221214|gb|EEY72528.1| arginine/ornithine ABC transporter permease protein AotQ [Grimontia hollisae CIP 101886] Length = 233 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/219 (23%), Positives = 109/219 (49%), Gaps = 18/219 (8%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P + AI+ T+ +A +S VI++++G A+ R+ + + + Y + RG P LV Sbjct: 9 PSIFMGAIL-TVELAVLSAVIAVLLGLVTAMARLS-KNRVARGVATLYSTVVRGVPDLVL 66 Query: 74 LFVIFYGLP--------------HIGIVF--DSFVAIIISLTLNFSAYISEIIRSSIISI 117 + +IF+G I + F D F A + ++ F AY++E R + +++ Sbjct: 67 MLLIFFGAQIMMNNISDWLYEHYEIDVFFNIDEFTAGVSTIGFIFGAYMAETFRGAFLAV 126 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 +GQ +A A G++ R ++ PQ + + + + ++ ++K+T++ S I + ++ + Sbjct: 127 DRGQLEAGTAYGMSPWMIFRRVMFPQMMRHALPGIGNNWLVLVKTTALVSVIGLADMTRL 186 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 A+ +P + +A VYL++TS + ++E Sbjct: 187 AKEAAGAVNEPFKFFIPVAIVYLLITSVSELGLKRLERK 225 >gi|241759156|ref|ZP_04757264.1| polar amino acid ABC transporter, inner membrane subunit [Neisseria flavescens SK114] gi|241320575|gb|EER56852.1| polar amino acid ABC transporter, inner membrane subunit [Neisseria flavescens SK114] Length = 222 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 102/192 (53%), Gaps = 8/192 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIG-FFIAVIRIFFSDTIISLIMH 59 M ++W L L +++T I+ IS S ++G F V+R + ++ LI Sbjct: 1 MAFDW--LFEGKNAARLGEGLLLTAQISLISVAASCVLGTLFGLVLRS--RNRLVRLIGR 56 Query: 60 FYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 FY+ R P+LV LF +++GL GI F + TL A + +++R ++ SI Sbjct: 57 FYLETIRIVPILVWLFGLYFGLSVWTGIHIGGFWVCVWVFTLWGIAEMGDLVRGALESIE 116 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 K Q ++ A+GL+R+Q R+I LPQ++ + + F ++K++S+AS I + E+ + Sbjct: 117 KHQVESGLALGLSRRQVFRYIELPQSVRRALPGAVNLFTRMIKTSSLASLIGVIEVVKVG 176 Query: 179 QRIVSTTY--QP 188 Q+I+ + QP Sbjct: 177 QQIIENSLLTQP 188 >gi|302185658|ref|ZP_07262331.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. syringae 642] gi|330950013|gb|EGH50273.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 248 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/156 (32%), Positives = 87/156 (55%), Gaps = 15/156 (9%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI------------- 84 +G + V+R + ++S I YV IFR PLLVQLF+ ++ +P + Sbjct: 46 LGSVLGVMRTV-PNRLVSGIATVYVEIFRNVPLLVQLFIWYFLVPDLLPENLQEWYKQDL 104 Query: 85 GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQT 144 +F+++++ L L +A + E +R+ I ++PKGQ A+ A+G Q +++LPQ Sbjct: 105 NPTTSAFLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQA 164 Query: 145 ITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 165 YRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|257455730|ref|ZP_05620958.1| histidine transport system permease protein HisQ [Enhydrobacter aerosaccus SK60] gi|257446858|gb|EEV21873.1| histidine transport system permease protein HisQ [Enhydrobacter aerosaccus SK60] Length = 239 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 13/208 (6%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L + F QLL + VT+ +A S VI LI+G A ++ +++ I Y I RG Sbjct: 2 LDLQGFGQLLLSGAWVTIKLALTSLVIGLILGLLGATAKMS-RFKVLNAIATAYTTIIRG 60 Query: 68 TP-LLVQLFVIFYGLPHIGIVFDSFV-----------AIIISLTLNFSAYISEIIRSSII 115 P LL +F+ F G +G++ F A + +L++ F AY +E R + Sbjct: 61 IPELLSVMFIYFGGSMLMGLILSQFGNTGYVDVSPFWAGVTALSVAFGAYATETFRMAFQ 120 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 IPKGQ +A+ AIG+ + Q + + LPQ + L + F+ +LK T++ S + + +I Sbjct: 121 EIPKGQAEAAQAIGMKKFQILWRVTLPQVWRIALPGLGNLFLVLLKDTALVSVVGLEDIM 180 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT 203 + A+ ++T P Y A +YL LT Sbjct: 181 RHAKTAATSTQSPFTFYMAAALLYLSLT 208 >gi|83595861|gb|ABC25223.1| general amino acid ABC transporter, permease protein [uncultured marine bacterium Ant4D3] Length = 369 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 92/163 (56%), Gaps = 12/163 (7%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFR 66 ++S L+ +++TL I V SL +G +A+ R + + +I +F ++ R Sbjct: 151 LESVGTHLFGGLMLTLTIGVTGIVFSLPLGILLALGR----QSNLPIIKYFCIGFIEFIR 206 Query: 67 GTPLLVQLFV----IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 G PL+ LFV + Y LP G FD + ++I +TL SAY++E+IR + ++PKGQ Sbjct: 207 GVPLITLLFVASTMLSYFLPP-GTTFDLLMRVLIMVTLFASAYMAEVIRGGLQALPKGQL 265 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 +A+ ++GL Q +R IILPQ + S + + FI + K +++ Sbjct: 266 EAAESLGLNYGQAMRFIILPQALKISIPGIVNTFIGLYKDSTL 308 >gi|319791542|ref|YP_004153182.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315594005|gb|ADU35071.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 243 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/166 (31%), Positives = 91/166 (54%), Gaps = 3/166 (1%) Query: 39 GFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS---FVAII 95 G I +IR + + +V +FR PLLVQ+F+ ++ +P + V S F+ ++ Sbjct: 46 GSLIGIIRTLPDSPWLVRFGNAWVELFRNIPLLVQIFLWYHVIPALIPVMKSVPSFILVV 105 Query: 96 ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSE 155 ++L SA I+E +RS I ++PKGQ A A+G T Q R++ILP PL+SE Sbjct: 106 LALGFFTSARIAEQVRSGIQALPKGQRYAGMAVGFTTTQYYRYVILPMAYRIIIPPLTSE 165 Query: 156 FISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 ++I K++SVA +++ E+ A + T + + +Y + Y++ Sbjct: 166 TMNIFKNSSVAFAVSVTELTMFAMQAQEETSRGIEVYLAVTACYVV 211 >gi|311103257|ref|YP_003976110.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 4 [Achromobacter xylosoxidans A8] gi|310757946|gb|ADP13395.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 4 [Achromobacter xylosoxidans A8] Length = 229 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 107/206 (51%), Gaps = 10/206 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I + P L + TL + ++ V+ L +G +A++R+ I+S+ YV + Sbjct: 6 FDVIWAALPYLFKTGMTFTLTLTALAGVMGLALGTLLAMMRLS-RFKILSVPAGIYVNVM 64 Query: 66 RGTPLLVQLFVIFYGLPHIG---------IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 R PLL+ +F ++ +P+I + +F + +I+ TL +AY EI+R+ I S Sbjct: 65 RSIPLLLVIFWFYFLVPYIAAWVVGSPTPLRVGAFNSAVITFTLFEAAYFCEIMRAGIQS 124 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 I +GQ AS A+GL Q +R+++LPQ L + I + + TS+ +++ + Sbjct: 125 IARGQVSASMALGLNHWQGMRYVVLPQAFRNMLPALLTRIIILFQDTSLVYVLSLTDFLG 184 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLIL 202 A +I + + +Y +A VY ++ Sbjct: 185 AAAKIGQRDGRLVELYLFVAVVYFVI 210 >gi|237785943|ref|YP_002906648.1| ABC transporter permease [Corynebacterium kroppenstedtii DSM 44385] gi|237758855|gb|ACR18105.1| ABC-type transport system, permease protein [Corynebacterium kroppenstedtii DSM 44385] Length = 310 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/212 (27%), Positives = 106/212 (50%), Gaps = 24/212 (11%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-- 81 TL + ++ I +++ A++R + ++ + Y+++FRG P+ QL +F+GL Sbjct: 68 TLLLTVLAMAIGIVLAVTAAIMRQS-ENPVLRSVAWAYIFVFRGIPVYTQL--VFWGLLA 124 Query: 82 ---PHI--GIVFD-------------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 P + G+ F +F A + L N AY++EI+RS + S+ +GQ + Sbjct: 125 VLYPKLSMGVPFGPEFFKFDTSDIITAFWAATLGLGFNEGAYLAEIVRSGLESVDEGQHE 184 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA-QRIV 182 A+ A+G+ +R II+PQ + PL +E I +LK+TS+ + Q A I Sbjct: 185 AARALGMKHSTVLRRIIIPQAMRVIIPPLGNETIGMLKTTSLVLAVPFTLDLQYATNAIA 244 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + Y P+ + A YL++TS + Q +E Sbjct: 245 NRLYAPIPLLIVAALWYLVVTSVLMVGQYFLE 276 >gi|77457435|ref|YP_346940.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77381438|gb|ABA72951.1| amino acid ABC transporter membrane protein 2, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 236 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 83/155 (53%), Gaps = 10/155 (6%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISE 108 FY ++FRGTPL +QL + + G+ + V DSF I++ LN AY +E Sbjct: 60 QFYTYLFRGTPLYIQLLICYTGIYSLAAVRAQPLLDSFFRDAMNCTILAFALNTCAYTTE 119 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I +I S+ G+ +A+ A GLT + ++I+P + S S+E I +L ST+VA T Sbjct: 120 IFAGAIRSMNHGEVEAAKAYGLTGWKLYAYVIMPSALRRSLPYYSNEVILMLHSTTVAFT 179 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 TIP+I + A+ S T+ + A +YL +T Sbjct: 180 ATIPDILKVARDANSATFLTFQSFGIAALIYLTIT 214 >gi|312962620|ref|ZP_07777110.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] gi|311283200|gb|EFQ61791.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] Length = 229 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/215 (24%), Positives = 106/215 (49%), Gaps = 13/215 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 +TL +A S +++++G +R+ ++ + Y + RG P LV + +IFYG Sbjct: 15 LTLQLALSSMALAIVLGLIGVALRLS-PVRWLAWLGDLYSTVIRGIPDLVLILLIFYGGQ 73 Query: 81 ------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P +G I + A I +L F AY+SE R + ++IPKGQ +A A G+ Sbjct: 74 DLLNRVAPMLGYDDYIDLNPLAAGIGTLGFIFGAYLSETFRGAFMAIPKGQAEAGLAYGM 133 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + Q +++PQ I + ++ ++ + K+T++ S + + ++ A++ T +P Sbjct: 134 SGFQVFFRVMVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATREPFT 193 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + +A +YL++TS + +E + + D Sbjct: 194 FFLAVAAMYLVITSVSLLALRHLEKRYSVGVRAAD 228 >gi|256843608|ref|ZP_05549096.1| ABC amino acid transporter [Lactobacillus crispatus 125-2-CHN] gi|256615028|gb|EEU20229.1| ABC amino acid transporter [Lactobacillus crispatus 125-2-CHN] Length = 186 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/140 (32%), Positives = 73/140 (52%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 +F ++S I YV + R TPLL+QLF ++Y P IG+ + V II L AY++ Sbjct: 10 YFKLPVLSQISTAYVELARNTPLLIQLFFLYYAFPVIGLKMSAEVCGIIGLIFLGGAYMA 69 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E + Q + A+G+ Q R+++ PQ + S L++ I ++K TS+ S Sbjct: 70 EGFTGGFTGVNPSQISSGKALGMNNFQLARYVVFPQGFSLSMPALTANIIFLIKETSIFS 129 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I IPE+ TA ++ Y+ Sbjct: 130 VIAIPELTNTALDLIGMYYR 149 >gi|77460757|ref|YP_350264.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77384760|gb|ABA76273.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein [Pseudomonas fluorescens Pf0-1] Length = 248 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 49/158 (31%), Positives = 89/158 (56%), Gaps = 15/158 (9%) Query: 36 LIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI----------- 84 L++G + ++R + I+S I YV +FR PLLVQLF+ ++ +P + Sbjct: 44 LLLGSLLGIMRTV-PNRIVSGIATCYVELFRNVPLLVQLFIWYFLVPDLLPPDLQEWYKQ 102 Query: 85 --GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 +++++++ L L +A + E +R+ I ++P+GQ A+ A+G Q +++LP Sbjct: 103 DLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQALPRGQESAARAMGFKLPQIYWNVLLP 162 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 Q PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 163 QAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|116670530|ref|YP_831463.1| polar amino acid ABC transporter inner membrane subunit [Arthrobacter sp. FB24] gi|116610639|gb|ABK03363.1| amino acid ABC transporter membrane protein, PAAT family [Arthrobacter sp. FB24] Length = 262 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/219 (29%), Positives = 115/219 (52%), Gaps = 23/219 (10%) Query: 4 EWFNLIIDSF----------PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI 53 +WFN II +F PQLL ++ TL I+ + +I + +G +AV+ I S + Sbjct: 2 DWFNTIIRTFFDFGAMAEVLPQLLGVGLLNTLIISVAATIIGVALGMVVAVMGISPSKWL 61 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG-IVFDS--FVAIIISLTLNFSAYISEII 110 + Y +FRG P ++ + +I G + +F + II+L+L SAYI EI Sbjct: 62 -RVPARIYTDLFRGLPAILTILLIGQGFARLSQSIFGPSPYPLGIIALSLIASAYIGEIF 120 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS----VA 166 R+ I S+ +GQ +A A+G++ +++ +++PQ I L ++FI+I+K +S + Sbjct: 121 RAGIQSVDRGQGEACRALGMSYAKSMALVVVPQGIRRVLPALVNQFIAIVKDSSLVYFLG 180 Query: 167 STITIPEIFQTAQR--IVSTTYQPLIIYCELAFVYLILT 203 +T E+F+ Q ++S PL++ YLI+T Sbjct: 181 LLVTERELFRVGQDAAVLSGNLSPLVMA---GIFYLIIT 216 >gi|300172545|ref|YP_003771710.1| glutamine ABC transporter permease [Leuconostoc gasicomitatum LMG 18811] gi|299886923|emb|CBL90891.1| glutamine ABC transporter permease component [Leuconostoc gasicomitatum LMG 18811] Length = 213 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 108/204 (52%), Gaps = 4/204 (1%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+ ++FP L TL + I+ + S+I+G A+++I +I + YV +FR Sbjct: 3 LLQNNFPTFL-QGFGYTLLSSIIALIGSMILGTGFAIMQIV-PQKWAQVIGNVYVQVFRN 60 Query: 68 TPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PLL+ F F + + F + ++L L SA+I+E +R+ I+S+ GQ + + A Sbjct: 61 IPLLIITFFFFLVVSKY-VKMSGFTSGTVALMLYTSAFIAETVRAGILSVNGGQMEGARA 119 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 GL+ Q +++IILPQ + L ++FI+++K++S+ + + ++ + + T+ Sbjct: 120 NGLSFAQAMQYIILPQAFRIALPSLGNQFINLVKNSSILAFVGGLDLMYQGNMVAANTFD 179 Query: 188 PLIIYCELAFVYLILT-SFCYIIQ 210 Y +A YLILT Y IQ Sbjct: 180 TFSTYIIVAIFYLILTLPLSYYIQ 203 >gi|170732503|ref|YP_001764450.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169815745|gb|ACA90328.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 229 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 107/217 (49%), Gaps = 16/217 (7%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F +L+A V T+ ++ +S ++ +G AV ++ + ++ I Y + R P L Sbjct: 5 GFGPVLWAGTVQTIELSVLSLATAVALGLIGAVAKLS-HNRVLRAIATGYTTLIRSVPDL 63 Query: 72 VQLFVIFY-------------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 V + ++FY G I I D FVA +++L + AY +E R + +S+P Sbjct: 64 VLMLLLFYSIQIWLNQFTDLVGWNQIDI--DPFVAGVLTLGFIYGAYFTETFRGAFLSVP 121 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + A Sbjct: 122 RGQLEAGSAYGMSGARVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAA 181 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q +T+ A +YL +T+ ++ I++E Sbjct: 182 QDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLEK 218 >gi|296156267|ref|ZP_06839106.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295893773|gb|EFG73552.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 246 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 99/182 (54%), Gaps = 24/182 (13%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL------ 81 AC+S V + ++GF +A+ +I ++ + YV +FR +PLLVQL ++G Sbjct: 28 ACVS-VCATLLGFGLAMAQIAQQRSVAA-AARLYVLVFRNSPLLVQLLFWYFGAATLLPQ 85 Query: 82 --------PHI------GIVFDSF--VAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 PH+ + + SF A + LT +A+I+E R+ I + Q+ A Sbjct: 86 PWMTWLNTPHVLSAGPFALHWPSFELFAGWLGLTCYSTAFIAEEFRAGIRGVGIAQYQAG 145 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+G+TR +RH+ILPQ + + PL+ ++++I+K++S+ I + E+ ++++ + + Sbjct: 146 AALGMTRYTALRHVILPQAVRIATPPLAGQYMNIVKNSSLTMAIGVAELSYMSRQVDTES 205 Query: 186 YQ 187 ++ Sbjct: 206 FR 207 >gi|116254867|ref|YP_770703.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259515|emb|CAK10653.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 252 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 115/227 (50%), Gaps = 9/227 (3%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+I +P + TL ++ +S ++ + A+ R+ S ++ + V+ Sbjct: 13 WLLLLIGQYPNGPLGGLANTLILSALSIALAFPVSILFALARLSRSP-LLRWPVTALVYF 71 Query: 65 FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RG PLL+ + ++ +P + G SFV ++ +L + SA++SE++R+ I+++ GQ D Sbjct: 72 TRGVPLLMLILWSYFLVPLLTGADVPSFVTMLTTLVVYQSAFLSEVVRAGIVALGPGQMD 131 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIV 182 A A+G + +R IILPQ + + S F+S +K T++ I +P++ F +Q Sbjct: 132 AGRALGHSYIGAMRFIILPQALYNMIPSIISTFVSTIKDTTLGYVINVPDLTFAASQVNN 191 Query: 183 STTYQPLIIYCELAFVYLILTSFCYII---QIKIESSVTQHTYSVDK 226 QP ++ LA VY + C+ + ++E S+T+ + Sbjct: 192 QLLTQPFQVFLILAIVYF---AICWTLTYFANRLERSITRRRAGLSN 235 >gi|34496308|ref|NP_900523.1| histidine transport system permease [Chromobacterium violaceum ATCC 12472] gi|34102161|gb|AAQ58528.1| histidine transport system permease protein [Chromobacterium violaceum ATCC 12472] Length = 229 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/230 (25%), Positives = 112/230 (48%), Gaps = 14/230 (6%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 + +D F +++ +VTL ++ +S +++ IG A ++ + ++ + Y + RG Sbjct: 1 MFLDGFGPIIWQGTLVTLELSVLSLLLAFAIGLVGAGAKLS-HNPLLGGVSTLYTTLVRG 59 Query: 68 TPLLVQLFVIFYGLPHIG------------IVFDSFVAIIISLTLNFSAYISEIIRSSII 115 P LV + +IFY L IG I D FV+ I++L + AY +E +R + + Sbjct: 60 VPDLVLMLLIFYSL-QIGMNKITEALRIEQIDLDPFVSGIVTLGFIYGAYFTETLRGAFL 118 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 S+PKGQ +A A G+T Q + PQ + + +S+ + +LK+T++ S I + ++ Sbjct: 119 SVPKGQIEAGIAYGMTSWQVFHRVQFPQMMRFALPGISNNWQVMLKATALVSIIGLADVV 178 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + + +TY+ +YL LT+ + K+E + D Sbjct: 179 KASVDAGKSTYKVFFFTLVAGAIYLALTTLSNFVLAKLERRYSTGVREAD 228 >gi|148980392|ref|ZP_01816035.1| ABC-type amino acid transport system, permease component [Vibrionales bacterium SWAT-3] gi|145961264|gb|EDK26576.1| ABC-type amino acid transport system, permease component [Vibrionales bacterium SWAT-3] Length = 366 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 6/194 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + ++VTL IA + V+SL IG +A+ R II I Y+ I+RG PL+ LF+ Sbjct: 156 WGGLLVTLIIALVGIVVSLPIGVALALGRRS-EMPIIRSICTVYIEIWRGVPLITVLFMA 214 Query: 78 FYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 LP G D ++ + L +AY++E+IR + +IPKGQ++A+ A+GLT + Sbjct: 215 SVMLPLFLTAGSETDKLFRALVGVVLFSAAYMAEVIRGGLQAIPKGQYEAADALGLTYWK 274 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + IILPQ + + + + FI + K TS+ I + ++ Q +T + L E Sbjct: 275 KMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPEWLGFATE 333 Query: 195 -LAFVYLILTSFCY 207 FV L+ FC+ Sbjct: 334 SYVFVALVFWVFCF 347 >gi|83950195|ref|ZP_00958928.1| polar amino acid uptake family ABC transporter, permease protein [Roseovarius nubinhibens ISM] gi|83838094|gb|EAP77390.1| polar amino acid uptake family ABC transporter, permease protein [Roseovarius nubinhibens ISM] Length = 246 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 104/196 (53%), Gaps = 19/196 (9%) Query: 4 EWF-NLII--DSFPQLLY-AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 +WF NL + D + + Y A + +T +A +S SLIIG A ++ S T+ +++ Sbjct: 13 DWFFNLAVVSDEYNRGRYLAGLWMTAKLAVVSIFFSLIIGAIGAAVQGAQSKTL-RVLVG 71 Query: 60 FYVWIFRGTPLLVQLFVIFY------------GLPHIGIVFDSFVAIIISLTLNFSAYIS 107 F+V FR TP LVQL+ ++ GLP + +F IISL+L A Sbjct: 72 FFVAFFRNTPPLVQLYFFYFAIGTVLRITGDNGLPQP--LIGNFGWAIISLSLFAGALNV 129 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 EI R+ I ++PK +A+ A+G TR Q I+LP + S L + ++++K+T++A Sbjct: 130 EIFRAGIEAVPKSTVEAAEALGYTRLQIYTDIVLPLAVRISLPALGTNLVNLVKTTTLAY 189 Query: 168 TITIPEIFQTAQRIVS 183 I +PE+ + +I S Sbjct: 190 AIAVPELLYVSAQIWS 205 >gi|296134851|ref|YP_003642093.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas intermedia K12] gi|294338804|emb|CAZ87138.1| Glutamate/aspartate transport system permease protein gltJ [Thiomonas sp. 3As] gi|295794973|gb|ADG29763.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas intermedia K12] Length = 242 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 100/182 (54%), Gaps = 12/182 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + + TL + ++VI++++G + V+R ++ + YV +FR PLLVQ F+ Sbjct: 22 LLSGLEYTLLLVVCAWVIAMVLGSVLGVVRTT-KHRFWVMLGNGYVELFRNIPLLVQFFL 80 Query: 77 IFYGLPHIGIVFDSF-----------VAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 ++ LP + F + ++ L L +A I+E ++S I S+P+GQ A Sbjct: 81 WYFVLPSVIPPLKRFANAVDPGTFQILTAVVCLGLFTAARIAEQVKSGIQSLPRGQTFAG 140 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GLT QT R+++LP PL+SE ++++K+++VA +I + E+F + + T Sbjct: 141 LALGLTPTQTYRYVLLPMAYRIIIPPLTSESMNLVKNSAVAYSIGLTELFFRTREMGEMT 200 Query: 186 YQ 187 ++ Sbjct: 201 FR 202 >gi|229592162|ref|YP_002874281.1| putative histidine transporter permease [Pseudomonas fluorescens SBW25] gi|229364028|emb|CAY51591.1| putative histidine transport system permease protein [Pseudomonas fluorescens SBW25] Length = 229 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/215 (24%), Positives = 106/215 (49%), Gaps = 13/215 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 +TL +A S +++++G +R+ ++ + Y + RG P LV + +IFYG Sbjct: 15 LTLQLALSSMALAIVLGLIGVALRLS-PVRWLAWLGDLYSTVIRGIPDLVLILLIFYGGQ 73 Query: 81 ------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P +G I + A I +L F AY+SE R + ++IPKGQ +A A G+ Sbjct: 74 DLLNRVAPMLGYDDYIDLNPLAAGIGTLGFIFGAYLSETFRGAFMAIPKGQAEAGLAYGM 133 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + Q +++PQ I + ++ ++ + K+T++ S + + ++ A++ T +P Sbjct: 134 SSFQVFFRVMVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATREPFT 193 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + +A +YL++TS + +E + + D Sbjct: 194 FFLAVAAMYLVITSVSLLALRSLEKRYSVGVRAAD 228 >gi|167897972|ref|ZP_02485374.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 7894] Length = 229 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/228 (22%), Positives = 108/228 (47%), Gaps = 12/228 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 ++ F LL+A + T+ +A +S SL++G A ++ S+ ++ + Y + R Sbjct: 1 MLFQGFGPLLWAGTIETVKLAVLSLAASLVLGLAGAAAKLS-SNRALASVGTLYTTLIRA 59 Query: 68 TPLLVQLFVIFYG-----------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 P LV + ++FYG L I D FVA I++L + AY +E R + ++ Sbjct: 60 VPDLVLMLLLFYGIQILLNDVTDMLGAEQIDIDPFVAGIVTLGFIYGAYFTETFRGAFLA 119 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ +A +A G+ + I+ Q + + + + + ++K+T++ S I + ++ + Sbjct: 120 VPRGQLEAGFAYGMGAWRVFARIMFAQMMRFALPGIGNNWQVLVKATALVSIIGLADVVK 179 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 AQ +T +YL +T+ ++ + +E + V Sbjct: 180 AAQDAGKSTLNFFFFTLAAGAIYLAITTLSNLVLMYLEKRYSAGVRRV 227 >gi|86360226|ref|YP_472115.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86284328|gb|ABC93388.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 251 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 104/197 (52%), Gaps = 3/197 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+I +P + TL ++ +S ++ I A+ R+ ++ + V+ Sbjct: 13 WLLLLIGQYPNGPLGGLANTLILSALSIALAFPISILFAMARLS-KAPLLRWPVTALVYF 71 Query: 65 FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RG PLL+ + ++ +P + G SFV ++ +L + SA++SE++R+ I+++ GQ D Sbjct: 72 TRGVPLLMLILWSYFLVPLLTGADVPSFVTMLTTLVVYQSAFLSEVVRAGIVALGPGQMD 131 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIV 182 AS A+G + +R+IILPQ + + S F+S +K T++ I +P++ F +Q Sbjct: 132 ASRALGHSYVGAMRYIILPQALYNMIPSILSTFVSTIKDTTLGYVINVPDLTFAASQVNN 191 Query: 183 STTYQPLIIYCELAFVY 199 QP ++ LA VY Sbjct: 192 QLLTQPFQVFLILAIVY 208 >gi|229591449|ref|YP_002873568.1| putative amino acid ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229363315|emb|CAY50433.1| putative amino acid ABC transporter, permease protein [Pseudomonas fluorescens SBW25] Length = 247 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 88/149 (59%), Gaps = 2/149 (1%) Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 L+ +V++ RG PLL+ +F ++ +P IG F+ ++ +L + SAY+ EIIR I Sbjct: 62 LLATVWVYVLRGIPLLMVIFWTYFLVPLLIGHNITGFMTMLCTLVIYQSAYLCEIIRGGI 121 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++P GQ++AS A+GL +T +ILPQ + + L S+FISI+K TS+ I + E+ Sbjct: 122 QALPAGQYEASRALGLGYVRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINVQEV 181 Query: 175 FQTAQRIVSTTY-QPLIIYCELAFVYLIL 202 A ++ + +P ++ LA +Y +L Sbjct: 182 TFAANQVNNQLLTKPFQVFFILAIIYYLL 210 >gi|330891107|gb|EGH23768.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] Length = 262 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 12/166 (7%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLP------HIGIVFDSFVAIIISLTLNFSAYI 106 ++ L +V +FR P LV ++ Y P I F +V + + L L SA + Sbjct: 86 LLRLPARLWVQVFRNAPWLVLIYFTTYVFPFEIKVAGTYIAFPDWVKVTLGLALPASANV 145 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EI R ++ SIP QW+A+ ++ TR Q R IILPQ + P + + I T++A Sbjct: 146 AEIFRGAVASIPATQWEAARSLAFTRGQIFRSIILPQCLKRMLPPWMNLYAVITMGTALA 205 Query: 167 STITIPEIFQTAQRIVSTTYQ---PLIIYCELAFVYLILTSFCYII 209 S + + ++ TAQ +T Q +IIYC L ++ ++CY I Sbjct: 206 SLVGVHDVIDTAQIASNTVNQTSFTVIIYCSLLALFF---AYCYPI 248 >gi|257488010|ref|ZP_05642051.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330985959|gb|EGH84062.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008684|gb|EGH88740.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 262 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 12/166 (7%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLP------HIGIVFDSFVAIIISLTLNFSAYI 106 ++ L +V +FR P LV ++ Y P I F +V + + L L SA + Sbjct: 86 LLRLPARLWVQVFRNAPWLVLIYFTTYVFPFEIKVAGTYIAFPDWVKVTLGLALPASANV 145 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EI R ++ SIP QW+A+ ++ TR Q R IILPQ + P + + I T++A Sbjct: 146 AEIFRGAVASIPATQWEAARSLAFTRGQIFRSIILPQCLKRMLPPWMNLYAVITMGTALA 205 Query: 167 STITIPEIFQTAQRIVSTTYQ---PLIIYCELAFVYLILTSFCYII 209 S + + ++ TAQ +T Q +IIYC L ++ ++CY I Sbjct: 206 SLVGVHDVIDTAQIASNTVNQTSFTVIIYCSLLALFF---AYCYPI 248 >gi|307706134|ref|ZP_07642953.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK321] gi|307618534|gb|EFN97682.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK321] Length = 219 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 11/192 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +TL I+ I+ V++ +IG +AV+R + I+ +I Y+ R P L+ +F Sbjct: 16 IFKGFGLTLYISLIAIVLATLIGTVLAVMR-NGKNPILRIISSIYIEFVRNVPNLLWIFT 74 Query: 77 IFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF +VF S A I + TL SA ++EIIR + ++ KGQ++A + G T Q Sbjct: 75 IF-------LVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQ 127 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYC 193 + HIILPQ I + S+F++++K TS+ S I + E+F +Q ++ ++P ++ Sbjct: 128 ILYHIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFEPEQVFS 187 Query: 194 ELAFVYLILTSF 205 + LI SF Sbjct: 188 LYILIALIYFSF 199 >gi|15596086|ref|NP_249580.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa PAO1] gi|107100347|ref|ZP_01364265.1| hypothetical protein PaerPA_01001372 [Pseudomonas aeruginosa PACS2] gi|116048813|ref|YP_792387.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa UCBPP-PA14] gi|218893142|ref|YP_002442011.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa LESB58] gi|254239242|ref|ZP_04932565.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa C3719] gi|254245176|ref|ZP_04938498.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa 2192] gi|296390757|ref|ZP_06880232.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa PAb1] gi|313105772|ref|ZP_07792035.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa 39016] gi|9946789|gb|AAG04278.1|AE004523_6 arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa PAO1] gi|115584034|gb|ABJ10049.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa UCBPP-PA14] gi|126171173|gb|EAZ56684.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa C3719] gi|126198554|gb|EAZ62617.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa 2192] gi|218773370|emb|CAW29182.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa LESB58] gi|310878537|gb|EFQ37131.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa 39016] Length = 229 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/153 (29%), Positives = 81/153 (52%), Gaps = 12/153 (7%) Query: 59 HFYVWIFRGTPLLVQLFVIFYG--------LPHIG----IVFDSFVAIIISLTLNFSAYI 106 Y + RG P LV + +IFYG P +G I + FV+ + +L F AY+ Sbjct: 50 DLYATVVRGIPDLVLILLIFYGGQGLLNWVAPQLGYDDYIDLNPFVSGVGTLGFIFGAYL 109 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 SE R + ++IPKGQ +A YA G++ +Q I +PQ I + ++ ++ ++K+T++ Sbjct: 110 SETFRGAFMAIPKGQGEAGYAYGMSHRQVFFRIQVPQMIRLAIPGFTNNWLVLVKATALI 169 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 S + + ++ A++ T +P Y +A +Y Sbjct: 170 SVVGLQDMMFKAKQASDATREPFTYYLAVAGLY 202 >gi|222480217|ref|YP_002566454.1| polar amino acid ABC transporter, inner membrane subunit [Halorubrum lacusprofundi ATCC 49239] gi|222453119|gb|ACM57384.1| polar amino acid ABC transporter, inner membrane subunit [Halorubrum lacusprofundi ATCC 49239] Length = 267 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 91/165 (55%), Gaps = 7/165 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L ++T+ + S ++ ++GF + ++ D + ++ + RGTP++V L V Sbjct: 53 LGVGALLTIGLTAASILLGFVVGFPAGAVEVY-GDGPLKRVVSAAGIVLRGTPIVVILIV 111 Query: 77 IFY--GLPHIGI----VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 +++ G+P I + + + A I+ L L +AY S+I R+++ S+ GQ +A +IGL Sbjct: 112 MYFVVGVPQINLGVASISSAMTAGILGLGLRSAAYQSQIFRATLSSVDDGQLEAGRSIGL 171 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 +R + +R++++PQ + S +EF +LK TS+ I + E+ Sbjct: 172 SRFEAVRYVVVPQALRRSIPGFQNEFTIVLKDTSIVFAIGLAELL 216 >gi|332529804|ref|ZP_08405758.1| polar amino acid ABC transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] gi|332040825|gb|EGI77197.1| polar amino acid ABC transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] Length = 226 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 7/159 (4%) Query: 64 IFRGTPLLVQLFVIFYGLPH-IGIVFDS------FVAIIISLTLNFSAYISEIIRSSIIS 116 + RG P + + V ++GL + I FD F A + +L L FSAY +E+ R S + Sbjct: 57 VLRGIPEFLIVLVCYFGLSNVINTHFDGAIDLSPFAAGVFALALVFSAYAAEVFRGSFAA 116 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQ +A+ ++GL QT + LPQ + L + + S+LK TS+ S + + ++ + Sbjct: 117 IPKGQIEAAQSLGLRPAQTFFAVRLPQAWRIALPSLGNLWQSLLKDTSLVSVVGLEDLLK 176 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 A T+QP + A VY + +Q +E Sbjct: 177 KANMAGQATHQPFVFLLAAAAVYFVFLHASQPVQRWLEQ 215 >gi|303256338|ref|ZP_07342354.1| amino acid ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|330999033|ref|ZP_08322758.1| putative general L-amino acid transport system permease protein AapQ [Parasutterella excrementihominis YIT 11859] gi|302861067|gb|EFL84142.1| amino acid ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|329575775|gb|EGG57301.1| putative general L-amino acid transport system permease protein AapQ [Parasutterella excrementihominis YIT 11859] Length = 386 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 71/114 (62%) Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 F+A+ I LT S+ I+EIIR+ ++++P+GQW A+ A+G+TR + I ++I PQ + + Sbjct: 254 EFLALWIGLTFFTSSSIAEIIRAGVLAVPRGQWHAAEALGMTRLEAISYVIFPQALKLAI 313 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL+S+++++ K++S+A + P++ ++ Q L + + VYL L Sbjct: 314 PPLASQYMNLTKNSSLAVVVGYPDLVSIGNSTINLNGQALEVIVIIMSVYLFLN 367 >gi|239944757|ref|ZP_04696694.1| putative glutamate ABC transporter permease protein [Streptomyces roseosporus NRRL 15998] gi|239991222|ref|ZP_04711886.1| putative glutamate ABC transporter permease protein [Streptomyces roseosporus NRRL 11379] gi|291448219|ref|ZP_06587609.1| glutamate transporter permease [Streptomyces roseosporus NRRL 15998] gi|291351166|gb|EFE78070.1| glutamate transporter permease [Streptomyces roseosporus NRRL 15998] Length = 215 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 115/203 (56%), Gaps = 13/203 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVW 63 N+++D+FP + T+ I +S +I+L++G +A R+ + + + +F +V Sbjct: 2 NVLLDNFPAF-RDGFIGTVSITAVSSLIALVLGVVVAGFRV----SPVPPLRYFGTAWVT 56 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIII-SLTLNF--SAYISEIIRSSIISIPKG 120 + R TPL + + F+ +P I +F ++ SL L F S+++ E +RS I ++P G Sbjct: 57 LMRNTPLTLLFLIFFFVVPEI--LFPGMSPFVLGSLALGFYTSSFVCEAVRSGINTVPLG 114 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ +IG+T QT++ ++LPQ T PLSS FI++ K++++A + E+F + Sbjct: 115 QAEAARSIGMTFAQTLQIVVLPQATRTVIPPLSSIFIALTKNSAIAGAFSNAELFGWQKL 174 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + Y + ++ +A YLI+T Sbjct: 175 MSDKGYDIVPVFIWVAIGYLIIT 197 >gi|171741233|ref|ZP_02917040.1| hypothetical protein BIFDEN_00307 [Bifidobacterium dentium ATCC 27678] gi|283455404|ref|YP_003359968.1| Glutamate transport ATP-binding protein gluA [Bifidobacterium dentium Bd1] gi|306823530|ref|ZP_07456905.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Bifidobacterium dentium ATCC 27679] gi|309802946|ref|ZP_07697047.1| ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] gi|171276847|gb|EDT44508.1| hypothetical protein BIFDEN_00307 [Bifidobacterium dentium ATCC 27678] gi|283102038|gb|ADB09144.1| Putative Glutamate transport ATP-binding protein gluA [Bifidobacterium dentium Bd1] gi|304553237|gb|EFM41149.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Bifidobacterium dentium ATCC 27679] gi|308220413|gb|EFO76724.1| ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] Length = 292 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 98/180 (54%), Gaps = 5/180 (2%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTP 69 S P++L A + + + + ++ + I IA++R + + L + Y I RG P Sbjct: 75 SLPEVL-AGLWLNVKVLVVALIGVAIFATLIALVRTSNNPVLFPLRVLAALYTTIMRGVP 133 Query: 70 LLVQLFVIFYGLPHIGI--VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 ++V L++I +G+P +GI D + I++ + +SAY++E++R+ + Q ++ + Sbjct: 134 MIVVLYLIGFGIPGLGIFGRIDPSLLGTIAVVMGYSAYVAEVLRAGFNDVHPSQRASARS 193 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GLT QT R I++PQ + A L ++FIS+ K + S + + + AQ V++TY Sbjct: 194 LGLTAGQTTRMIVIPQALRKVAPALMNDFISMQKDVGLISVLGAVDAVRAAQIEVASTYN 253 >gi|172063350|ref|YP_001811001.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171995867|gb|ACB66785.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 594 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 108/203 (53%), Gaps = 24/203 (11%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV----------IFYGLP 82 V +G F+A+ R+ S +++ +VW+FR PL+V L + + G+P Sbjct: 90 VFGFALGAFVALARLSRS-RLLAASAWTFVWLFRSIPLIVLLLILNNLGYLYEHVRLGVP 148 Query: 83 HIGIV-FDS--------FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 IV FD+ F+A ++ LTLN +A+ +E+IR I+++ +GQ +A+ A+GL R Sbjct: 149 FTDIVWFDTPTTDLISPFLAAVLGLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRG 208 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLII 191 + I+LPQ + ++ IS+ K TS+ + +PE+F T Q I + PL++ Sbjct: 209 RQTTRIVLPQAMRAILPTAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLM 268 Query: 192 YCELAFVYLILTSFCYIIQIKIE 214 + YLI+ + IQ+++E Sbjct: 269 VATV--WYLIILTVLSTIQVQVE 289 >gi|163800830|ref|ZP_02194730.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4] gi|159175179|gb|EDP59976.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4] Length = 365 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 8/195 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFV 76 + ++VTL IA + V+SL IG +A+ R SD II I Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVALALGR--RSDMPIIRSICTVYIEVWRGVPLITVLFM 212 Query: 77 IFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G D + +I + + +AY++E++R + +IPKGQ++A+ A+GL+ Sbjct: 213 ASVMLPLFLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYW 272 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + IILPQ + + + + FI + K TS+ I + ++ Q +T + L Sbjct: 273 KKTGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPEWLGFAT 331 Query: 194 E-LAFVYLILTSFCY 207 E FV L+ FC+ Sbjct: 332 ESYVFVALVFWVFCF 346 >gi|254780171|ref|YP_003064584.1| ABC transporter membrane spanning protein (amino acid) [Candidatus Liberibacter asiaticus str. psy62] gi|254039848|gb|ACT56644.1| ABC transporter membrane spanning protein (amino acid) [Candidatus Liberibacter asiaticus str. psy62] Length = 398 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 112/217 (51%), Gaps = 40/217 (18%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 SFP L T+ FV S ++G +++ S HF+ + PLL Sbjct: 177 SFPTL-------TMDTNAKIFVFSFVLGIVLSLFATRLSR-------HFHEKTGKALPLL 222 Query: 72 -VQLFVIFYGLPHIGIV-------FDS-----------------FVAIIISLTLNFSAYI 106 + F+IF GLP + ++ FD F+++ I+L+ +A+I Sbjct: 223 YISTFLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EI+RS +I++P+GQ +A+ A+GLT ++ R ++LPQ + + PL+S+++++LK++S+A Sbjct: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + ++ I++ T Q + I F+YL L+ Sbjct: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 >gi|300172351|ref|YP_003771516.1| L-cystine permease [Leuconostoc gasicomitatum LMG 18811] gi|299886729|emb|CBL90697.1| L-cystine permease protein [Leuconostoc gasicomitatum LMG 18811] Length = 234 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 107/201 (53%), Gaps = 28/201 (13%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF---- 78 +T+ +A +S +I ++G +A++R ++ +S + + I +G PL++ VIF Sbjct: 21 ITIYMAVVSLIIGGMLGLVVALVR-YYKVPGLSQLFSIVITILKGVPLILVFLVIFLITS 79 Query: 79 ---------------YG-LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 YG LP V II L+L + +SE R + S+ + Q+ Sbjct: 80 QNFNHFAKAVGWHVRYGDLPM-------SVLAIIGLSLMATVGLSEAFRGAFESVKQVQF 132 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 DA+ ++G+T+ QTIR +++PQT+ + + + FI+++K T++AS +++ EIF A + Sbjct: 133 DAARSLGMTQLQTIRRVLIPQTMPVALPMIINMFINLIKGTAIASLVSVVEIFSAATQAA 192 Query: 183 STTYQPLIIYCELAFVYLILT 203 S+ Y+ Y A +Y ++T Sbjct: 193 SSNYKYFEAYIAAALIYWMMT 213 >gi|227329655|ref|ZP_03833679.1| binding-protein-dependent transport system inner membrane component [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 242 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/210 (25%), Positives = 115/210 (54%), Gaps = 14/210 (6%) Query: 8 LIIDSFPQLLYAAIVVTLPIACI----SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 L+ +FP +TL ++ + S ++ I+G +A+ R ++S ++++++ F Sbjct: 13 LMWGTFPDGPLGGAALTLMMSLLAGIASAILGTILGVALAMSRGWWS-ALLAMVLGF--- 68 Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FR P+++ +F ++ LP + G+ ++ +L L SAY++ +++ I++I +GQW Sbjct: 69 -FRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHGVKAGIVAIGRGQW 127 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRI 181 A ++GL+R Q + I+LPQ + +++IS++K TS+A + + E+ F Q Sbjct: 128 QAGLSLGLSRWQVLWQIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQVN 187 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 + P+ ++ +A VY + FC +++ Sbjct: 188 NRSMVYPMEVFLFVALVYFV---FCLSLEL 214 >gi|222081928|ref|YP_002541293.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726607|gb|ACM29696.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 217 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/145 (33%), Positives = 83/145 (57%), Gaps = 5/145 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNF---SAYISEIIRSSIISI 117 Y+ I +GTPLLV LF+I++G+ +G FD AII + S ++ EI R I S+ Sbjct: 55 YIQIVQGTPLLVLLFLIYFGIAILG--FDQVPAIIAAAAGLIIYSSGFLGEIWRGCIESV 112 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PK QW+A+ + L+R Q + +ILPQ + + P + I+K+TS+AS + E+ Q Sbjct: 113 PKTQWEAAECLALSRWQRMIKVILPQALRIATPPTVGFLVQIVKNTSLASVVGFVELSQA 172 Query: 178 AQRIVSTTYQPLIIYCELAFVYLIL 202 + I ++ ++P ++ +A Y + Sbjct: 173 GKLINNSIFEPFTVFIVVAVFYFAM 197 >gi|289627072|ref|ZP_06460026.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330866807|gb|EGH01516.1| glutamine ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 482 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 87/149 (58%), Gaps = 5/149 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V++ RG PLL+ +F ++ +P IG F ++ +L + SAY+ EIIR +I ++P Sbjct: 303 WVYVMRGIPLLMVIFWTYFLVPLLIGHNITGFTTMLCTLVVYQSAYLCEIIRGAIQALPA 362 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++AS A+G+ +T +ILPQ + + L S+FISI+K TS+ I + E+ A Sbjct: 363 GQYEASRALGMGYMRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINVQEVTFAAN 422 Query: 180 RIVSTTY-QPLIIYCELAFVYLILTSFCY 207 +I + +P ++ LA Y +L CY Sbjct: 423 QINNQLLTKPFQVFFILAITYYVL---CY 448 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 107/211 (50%), Gaps = 10/211 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K++ ++ + +L+ I TL +A +++ +++ + + IR+ + L+ Y Sbjct: 4 KFDLSAILQGEYAELIVKGIETTLQLAFVAWCMAMAVALLLVSIRLTGNKYAERLVAG-Y 62 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 V R P LVQL + ++G+P + ++ +I+L L +AY SE IRS Sbjct: 63 VSYHRNVPTLVQLMLWYFGIPTLLTESTQLWLANYSTEYLFSVIALGLCQAAYFSEDIRS 122 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +IP GQ +AS A+GL +++R++ILPQ + L + + + K+TS+ I + Sbjct: 123 GLRAIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVV 182 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+ + + + T++ Y VYL ++ Sbjct: 183 ELTYATREVENYTFRTFEAYLVATVVYLAIS 213 >gi|209547422|ref|YP_002279340.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538666|gb|ACI58600.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 516 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 14/209 (6%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W + + + P ++ + TL +A S V+ ++IG +AV+ I S + L Y Sbjct: 17 DW-DAMAEVLPSMISVGLKNTLILAAASTVLGVVIGMALAVMGISQS-RWLRLPARIYTD 74 Query: 64 IFRGTPLLVQLFVIFYGLPHIGI-VFDS--FVAIIISLTLNFSAYISEIIRSSIISIPKG 120 IFRG P +V + +I G IG +F F I++L+L AYI EI RS I S+ +G Sbjct: 75 IFRGLPAIVTILIIGQGFARIGREIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERG 134 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS----VASTITIPEIFQ 176 Q +A A+ ++ Q +R I++PQ I L ++FI +K +S + + EIF+ Sbjct: 135 QMEACRALSMSYGQGMRLIVIPQGIRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFR 194 Query: 177 TAQR--IVSTTYQPLIIYCELAFVYLILT 203 Q +V+ PL++ YL++T Sbjct: 195 VGQDQAVVTGNLSPLLLA---GLFYLVIT 220 >gi|153839325|ref|ZP_01991992.1| general L-amino acid transport system permease protein AapM [Vibrio parahaemolyticus AQ3810] gi|260366018|ref|ZP_05778496.1| general L-amino acid transport system permease protein AapM [Vibrio parahaemolyticus K5030] gi|260898003|ref|ZP_05906499.1| general L-amino acid transport system permease protein AapM [Vibrio parahaemolyticus Peru-466] gi|149747157|gb|EDM58145.1| general L-amino acid transport system permease protein AapM [Vibrio parahaemolyticus AQ3810] gi|308088044|gb|EFO37739.1| general L-amino acid transport system permease protein AapM [Vibrio parahaemolyticus Peru-466] gi|308114204|gb|EFO51744.1| general L-amino acid transport system permease protein AapM [Vibrio parahaemolyticus K5030] gi|328473626|gb|EGF44461.1| amino acid ABC transporter permease [Vibrio parahaemolyticus 10329] Length = 365 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 8/195 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFV 76 + ++VTL IA + V+SL IG +A+ R SD II I Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVALALGR--RSDMPIIRSICTIYIEVWRGVPLITVLFM 212 Query: 77 IFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G D + +I + + +AY++E++R + +IPKGQ++A+ A+GL+ Sbjct: 213 ASVMLPLFLAEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYW 272 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + IILPQ + + + + FI + K TS+ I + ++ Q +T + L Sbjct: 273 KKTGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPEWLGFAT 331 Query: 194 E-LAFVYLILTSFCY 207 E FV L+ FC+ Sbjct: 332 ESYVFVALVFWVFCF 346 >gi|116513423|ref|YP_812329.1| ABC-type amino acid transport system, permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|161507577|ref|YP_001577531.1| amino acid ABC transporter permease protein [Lactobacillus helveticus DPC 4571] gi|260101516|ref|ZP_05751753.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus helveticus DSM 20075] gi|116092738|gb|ABJ57891.1| amino acid ABC transporter membrane protein 2, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|160348566|gb|ABX27240.1| amino acid ABC transporter permease protein [Lactobacillus helveticus DPC 4571] gi|260084659|gb|EEW68779.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus helveticus DSM 20075] gi|325125053|gb|ADY84383.1| ABC transporter [Lactobacillus delbrueckii subsp. bulgaricus 2038] gi|328466383|gb|EGF37535.1| amino acid ABC transporter permease [Lactobacillus helveticus MTCC 5463] Length = 224 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 99/178 (55%), Gaps = 3/178 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L+ A + ++ IA IS +I L IG ++R ++ II ++ Y+ FR P Sbjct: 13 SNFARLM-AGLWTSIWIAAISLIIGLAIGTIFGILRTL-TNKIIRFVLRIYLEFFRIVPT 70 Query: 71 LVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +V L++++Y LP + + + +++ +L +A S+I+R +I S+PK Q ++ A+G Sbjct: 71 IVLLYLVYYILPRTFHVNWPATWMAVLAFSLWVAAEFSDIVRGAIESVPKSQRESGLALG 130 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 L++ Q R+++LPQ + + ++K+TS+ I+I E+ Q+I+ Q Sbjct: 131 LSKIQLFRYVLLPQAVKLELPATINLATRVIKTTSLLLVISIMEVINVGQQIIEANNQ 188 >gi|238787848|ref|ZP_04631645.1| ABC-type amino acid transport system permease component [Yersinia frederiksenii ATCC 33641] gi|238724191|gb|EEQ15834.1| ABC-type amino acid transport system permease component [Yersinia frederiksenii ATCC 33641] Length = 248 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/201 (26%), Positives = 105/201 (52%), Gaps = 3/201 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ +FP +TL I+ ++ V S I+G + V+ + S I S I+ + Sbjct: 9 NWRYLLWGTFPDGPLGGAALTLLISLMAGVASAILGTILGVL-LAMSRGIWSGILAAILG 67 Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FR P+++ +F ++ LP + G+ ++ +L L SAY++ +++ I++I GQW Sbjct: 68 FFRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIVAIGAGQW 127 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRI 181 A ++G R Q + ++LPQ + +++IS++K TS+A + + E+ F Q Sbjct: 128 QAGLSLGFNRWQVLWFVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQVN 187 Query: 182 VSTTYQPLIIYCELAFVYLIL 202 + P+ ++ +A VY +L Sbjct: 188 NRSMVYPMEVFLFVALVYFVL 208 >gi|57168604|ref|ZP_00367737.1| glutamine ABC transporter, permease protein (glnP) [Campylobacter coli RM2228] gi|305433022|ref|ZP_07402178.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter coli JV20] gi|57020109|gb|EAL56786.1| glutamine ABC transporter, permease protein (glnP) [Campylobacter coli RM2228] gi|304443723|gb|EFM36380.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter coli JV20] Length = 233 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 79/158 (50%), Gaps = 18/158 (11%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD------------------ 89 +F TI+ Y+ R TPLL+QLF ++Y LP I + Sbjct: 43 YFKITIMEAFCKVYIEFSRNTPLLIQLFFLYYALPKFDIHLEQIPPLNLICLSVDEALRP 102 Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 +F I+ L+ +Y++E R+ +I K Q++A ++G T+ +R++I+PQ + Sbjct: 103 AFACAIVGLSFLGGSYMAESFRAGFEAIKKQQFEAGLSLGFTKLNNLRYVIMPQALGVCL 162 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +S+ + ++K TSV S I +P++ + + S TY+ Sbjct: 163 PGISANIVFLIKETSVVSIIALPDLVTVMKGLNSLTYK 200 >gi|238063457|ref|ZP_04608166.1| ABC amino acid transporter permease component [Micromonospora sp. ATCC 39149] gi|237885268|gb|EEP74096.1| ABC amino acid transporter permease component [Micromonospora sp. ATCC 39149] Length = 218 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 98/172 (56%), Gaps = 6/172 (3%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF--Y 61 E+F ++ D++ L T+ + I+ V SL++G + +R+ + +L Y Sbjct: 3 EFFRVLTDNW-TLYRDGFTNTVQLFLIAAVGSLVLGTLLGAMRV---SPVPALRASGATY 58 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 V I R TPL + + +G+P + + D F + I+LT+ +A++ E+IRS + ++ GQ Sbjct: 59 VNIVRNTPLTLVFAFLVFGVPKLDVNIDYFDSACIALTVYTAAFVCEVIRSGVNTVGTGQ 118 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 +A+ A+G+T Q + I+LPQ + P+ S FI++LK+T++A+ ++ E Sbjct: 119 AEAARALGMTFAQVLTLIVLPQALRAMVPPMMSVFIAMLKNTTIAAGFSVLE 170 >gi|171778131|ref|ZP_02919388.1| hypothetical protein STRINF_00223 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283113|gb|EDT48537.1| hypothetical protein STRINF_00223 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 267 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 66/237 (27%), Positives = 112/237 (47%), Gaps = 16/237 (6%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W + D+ P LL + TL + LI+ A+++I ++ I +V Sbjct: 26 FSW-RAVFDAIPDLL-GHLPTTLGLTLAGAFFGLILALVFAIVKIN-RPKVLYPIQAVFV 82 Query: 63 WIFRGTPLLVQLFVIFYGLP------HIGIVFD-------SFVAIIISLTLNFSAYISEI 109 RGTP+LVQL + +YG+P + FD + V + + N +AY SE Sbjct: 83 SFLRGTPILVQLMLTYYGIPLFLKFLKLKYGFDWNINAIPASVFAVTAFAFNEAAYTSET 142 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 IR++I ++ G+ +A+ ++G+T Q R +I+P + L + I + K TS+A Sbjct: 143 IRAAIQAVNVGEIEAARSLGMTSFQVYRRVIIPNAAVIATPTLINSLIGLTKGTSLAFNA 202 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 I EIF AQ + + Y+ Y +A VY I++ I IE +T T + + Sbjct: 203 GIVEIFAQAQILGGSDYRYFERYISVALVYWIISIIIEQIGRLIEKKMTIDTPKISQ 259 >gi|92117597|ref|YP_577326.1| amino acid ABC transporter permease [Nitrobacter hamburgensis X14] gi|91800491|gb|ABE62866.1| amino acid ABC transporter membrane protein 2, PAAT family [Nitrobacter hamburgensis X14] Length = 506 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 15/218 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQ 73 L+ ++VTL ++ V S+ IG +A+ R + I LI F ++ +RG PL+ Sbjct: 293 LWGGLLVTLVVSVTGIVASIPIGIALALGR----RSTIPLIRIFSIAFIEFWRGIPLITV 348 Query: 74 LFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LF Y LP D V ++I + L AY +E+IR + +IP+GQ +A++A+GL Sbjct: 349 LFFATYMLPLFLPGNFTVDGLVRVLIGVALFAGAYNAEVIRGGLAAIPRGQAEAAHALGL 408 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT--AQRIVSTTYQP 188 + +T I++PQ + L + FI++ K TS+ S + + ++ + A T P Sbjct: 409 SYWKTTGLIVMPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLGSLRASFADPTWATP 468 Query: 189 LIIYCELAFVYLILTSFCYII---QIKIESSVTQHTYS 223 ++ AF +I FC+ + + +E + H S Sbjct: 469 TTLFTGFAFAGIIYFVFCFGMSRYSLFVEHRLNAHRRS 506 >gi|86357101|ref|YP_468993.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86281203|gb|ABC90266.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 260 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 46/124 (37%), Positives = 68/124 (54%), Gaps = 6/124 (4%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV------AIIISLTLNFSAYISEIIRSSI 114 YV FR P LV +F Y P +VF +++ +I L + SAY++EI R +I Sbjct: 89 YVQAFRNAPHLVLIFATTYIFPFEIVVFGNYLPFPDWLKAVIGLAIPASAYVAEITRGAI 148 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +SIP QW+A+ +G +R Q +R IILPQ + S P + SI TS+AS + + E+ Sbjct: 149 LSIPTTQWEAAKGLGFSRSQALRWIILPQCLRRSLPPWMNILASITMGTSLASLVGVHEL 208 Query: 175 FQTA 178 A Sbjct: 209 LHAA 212 >gi|51891627|ref|YP_074318.1| amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] gi|51855316|dbj|BAD39474.1| amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] Length = 229 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 79/131 (60%), Gaps = 1/131 (0%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 + YV + + TPL+ Q+F ++Y LPH I+ + ++ L + AY++E++R+ I + Sbjct: 58 VSRLYVSLIQNTPLVTQVFFLYYLLPHFDIMLPTPAVGVLGLGVYHGAYMTEVVRAGIQA 117 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-F 175 I +GQ +A+ + G T Q +RHIILPQ P++++ ++++K++S+ + I+ ++ F Sbjct: 118 IHRGQLEAALSQGFTYVQAMRHIILPQATQIVLPPMTNQAVALIKNSSILAMISGGDLMF 177 Query: 176 QTAQRIVSTTY 186 Q ST Y Sbjct: 178 QADSWSASTGY 188 >gi|227115098|ref|ZP_03828754.1| putative ABC transporter, permease [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 314 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 112/207 (54%), Gaps = 26/207 (12%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY----------GLPHI 84 S+I G +A+ R+ S ++S + Y+W+FR PL++ L +++ G+P Sbjct: 88 SIIFGTALALARLSPS-YLLSTLSWLYIWLFRSLPLILVLIILYNFSYLYDELALGIPFT 146 Query: 85 GIVF---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +VF D F ++ LTL SAY +EIIR I+ + GQ++AS A+GL + Sbjct: 147 SVVFLRYPTIDLLDQFSVAVLGLTLVQSAYTAEIIRGGILGVDAGQFEASAALGLPSSRR 206 Query: 136 IRHIILPQTITTSAVPLS-SEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIY 192 IILPQ + S +P +E IS+ K TS+ + +PE+F T Q I + T Q PL++ Sbjct: 207 TVRIILPQAL-RSILPTGFNEIISLAKGTSIVYVLALPELFYTVQVIYNRTQQVIPLLMV 265 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQ 219 + YL++T+ +IQ +E V++ Sbjct: 266 ATIW--YLLITTVLSVIQYYVERYVSR 290 >gi|150018982|ref|YP_001311236.1| polar amino acid ABC transporter inner membrane subunit [Clostridium beijerinckii NCIMB 8052] gi|149905447|gb|ABR36280.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium beijerinckii NCIMB 8052] Length = 210 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 11/203 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + +TL IA IS V+S+ G +A+ R F S I+ I Y+ FR TP L+ + Sbjct: 13 LLQGMKLTLIIAIISIVLSMFFGIILAISRNF-SKGIMGRIATIYIETFRNTPNLLWILS 71 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 I + +P + I+S TL SA ++EI R + S+ +GQ++A+Y+ G T+ QT+ Sbjct: 72 IRFLVP-----IKPMYSGILSFTLFTSAVMAEIFRGGMNSVSRGQYEAAYSQGFTKFQTL 126 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS---TTYQPLIIYC 193 R+IILPQ+ + S+ I+++K TS + I E ++ ++ Q +++ Sbjct: 127 RYIILPQSFRRCIPTVLSQSITVIKDTSFLWAVGIEEFTGKGMILMGSFVSSSQIFLLFG 186 Query: 194 ELAFVYLIL--TSFCYIIQIKIE 214 +A Y I+ T C + IK E Sbjct: 187 AIAATYFIINFTISCCVRTIKTE 209 >gi|119896732|ref|YP_931945.1| putative glutamine transport permease [Azoarcus sp. BH72] gi|119669145|emb|CAL93058.1| putative glutamine transport permease protein [Azoarcus sp. BH72] Length = 245 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 100/188 (53%), Gaps = 10/188 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T ++ + I+L++G + V+R S +++ I YV IFR PL+VQLF+ F+ +P Sbjct: 31 TTAVSLSALAIALLVGSVLGVMRTTPSKLLVA-IGDTYVDIFRNVPLIVQLFMWFFVVPE 89 Query: 84 -----IGIVFDS----FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IG+ FV +I L L +A I+E ++S I ++ +GQ A A+G T Q Sbjct: 90 LVPESIGLWMKQDLPYFVTAVIGLGLYTAARIAEQVKSGINALARGQRFAGLALGFTEWQ 149 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 T R++ LP L+SE ++I K+++V + I E++ ++I+ T Q L I Sbjct: 150 TYRYVRLPMAYRIVLPALTSEAMNIFKNSAVTYAVGILELYFQYKQIIEKTSQVLEITIV 209 Query: 195 LAFVYLIL 202 + Y +L Sbjct: 210 VTLTYFVL 217 >gi|190891145|ref|YP_001977687.1| amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190696424|gb|ACE90509.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 263 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 46/124 (37%), Positives = 68/124 (54%), Gaps = 6/124 (4%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFV------AIIISLTLNFSAYISEIIRSSI 114 YV FR P LV +F Y P +VF +++ +I L + SAY++EI R +I Sbjct: 92 YVQAFRNAPHLVLIFATTYIFPFEIVVFGNYLPFPDWLKAVIGLAIPASAYVAEITRGAI 151 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +SIP QW+A+ +G +R Q +R IILPQ + S P + SI TS+AS + + E+ Sbjct: 152 LSIPTTQWEAAKGLGFSRSQALRWIILPQCLRRSLPPWMNILASITMGTSLASLVGVHEL 211 Query: 175 FQTA 178 A Sbjct: 212 LHAA 215 >gi|115351570|ref|YP_773409.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria AMMD] gi|115281558|gb|ABI87075.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia ambifaria AMMD] Length = 241 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 102/199 (51%), Gaps = 7/199 (3%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + +FP ++L +A S V S +G + V + L++ F + FR P Sbjct: 15 VGAFPDGPLGGAALSLVLAIASAVASAGLGVALGVAMALARGPLRVLLLAF-IGFFRAIP 73 Query: 70 LLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 +L+ +F ++ LP H+ + ++ +L L AY++ + + I++ GQW A Sbjct: 74 VLMLIFWTYFLLPMLLHVDV--PGLATVVCALALIGGAYLAHAVHAGIVAAGDGQWQAGL 131 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVSTT 185 ++GLTR QT+R+++LPQ I +++++++K TS+A + +PE+ F Q Sbjct: 132 SLGLTRWQTVRYVLLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNRLM 191 Query: 186 YQPLIIYCELAFVYLILTS 204 P I+ +A +YL+L + Sbjct: 192 VYPAPIFLFVAALYLVLCT 210 >gi|327470643|gb|EGF16099.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK330] Length = 219 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 108/196 (55%), Gaps = 15/196 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I+ IS V+S I G +AV+R + ++ LI Y+ R P L+ +F IF Sbjct: 22 LTLQISFISIVLSTIFGTILAVMRNG-KNKLLKLIASIYIEFVRNVPNLLWIFTIF---- 76 Query: 83 HIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 +VF S A IIS T+ SA ++EIIR + +I GQ +A + G T+ Q +R II Sbjct: 77 ---LVFQIKSTPAGIISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRFII 133 Query: 141 LPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 LPQ I + S+F++++K TS+ S I + E+F +AQ ++ ++ ++ +Y Sbjct: 134 LPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFA----LY 189 Query: 200 LILTSFCYIIQIKIES 215 L++ + ++I I S Sbjct: 190 LLVAAIYFLINFAISS 205 >gi|170694836|ref|ZP_02885986.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170140196|gb|EDT08374.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 265 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 93/161 (57%), Gaps = 4/161 (2%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L+++S P L+ +V TL ++ IS + ++ G +A+ + + ++ + +V +FRG Sbjct: 13 LLVESLPALIGTGLVNTLILSVISTALGIVAGMALALCAVSHTR-WLTWPVRVFVDVFRG 71 Query: 68 TPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 P + + V+ GL +G+ + + I++L L SAYI+EI RS I S+ + Q A Sbjct: 72 LPAALVILVVGQGLAPVGLSLFGPNPYPLAIVALALVSSAYIAEIFRSGIQSVGRRQMSA 131 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 A+G+T +RH+I+PQ + L+++FISI+K +S+ Sbjct: 132 CQALGMTYWSGMRHVIVPQGVRRILPALANQFISIVKDSSL 172 >gi|302671819|ref|YP_003831779.1| amino acid ABC transporter permease [Butyrivibrio proteoclasticus B316] gi|302396292|gb|ADL35197.1| amino acid ABC transporter permease protein [Butyrivibrio proteoclasticus B316] Length = 224 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 109/195 (55%), Gaps = 6/195 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + V++ I+ IS VIS+++G + V+ + + + ++ Y+ R P +V LF+ Sbjct: 18 LLKGLWVSVEISLISVVISIVLGLAVGVL-MTSKNRALKAVLRLYLETVRIMPQMVLLFI 76 Query: 77 IFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +++G + G+ + ++ II +A + +++R SI SIPK Q++++YA+G + Q Sbjct: 77 VYFGSTRVFGLDISAEISAIIVFVFWGTAEMGDLVRGSIKSIPKIQYESAYALGFNKTQV 136 Query: 136 IRHIILPQTITTSAVPLSSEFIS-ILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIY 192 +II PQT+ +PLS ++ ++K+TS+ I I E+ + AQ+I+ + P + Sbjct: 137 HFYIIFPQTL-RRLLPLSINLVTRMIKTTSLVMMIGIVEVLKVAQQIIEANRRSSPNAAF 195 Query: 193 CELAFVYLILTSFCY 207 A V+L+ C+ Sbjct: 196 GVFAVVFLLYFVVCW 210 >gi|317491135|ref|ZP_07949571.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920682|gb|EFV42005.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 224 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 11/210 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 +++W + I+ S P L+ +V+TL I I+ V +I G +AV+R+ S +IS Y Sbjct: 3 EFDWSS-IVPSLPYLM-NGMVITLKITLIAVVFGIIWGTILAVMRLS-SFKLISWFATLY 59 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-----GIVFDS---FVAIIISLTLNFSAYISEIIRSS 113 V +FR PL++ L + +P + G+ + ++ +++ +L +AY SEIIR+ Sbjct: 60 VNLFRSVPLVMVLLWFYLVVPSLLQQVLGLSPKTDIRLISAMVAFSLFEAAYYSEIIRAG 119 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I S+ KGQ AS A+G+T Q++R +ILPQ L ++ I + + TS+ +++ + Sbjct: 120 IQSVSKGQSGASLALGMTHWQSMRLVILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLAD 179 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 F+TA I + + FVY I++ Sbjct: 180 FFRTASTIGERDGTQVEMILFAGFVYFIIS 209 >gi|91227963|ref|ZP_01262073.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] gi|91188284|gb|EAS74582.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] Length = 365 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 6/194 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + ++VTL IA + V+SL IG +A+ R II I Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVVLALGR-RSEMPIIRSICTVYIEVWRGVPLITVLFMA 213 Query: 78 FYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 LP G D + +I + + SAY++E++R + +IPKGQ++A+ A+GL+ + Sbjct: 214 SVMLPLFMSEGSETDKLIRALIGVVMFASAYMAEVVRGGLQAIPKGQYEAADALGLSYWK 273 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 IILPQ + + + + FI + K TS+ I + ++ Q +T + L E Sbjct: 274 KTGLIILPQALKIAIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPEWLGFATE 332 Query: 195 -LAFVYLILTSFCY 207 FV L+ FC+ Sbjct: 333 SYVFVALVFWVFCF 346 >gi|325694842|gb|EGD36747.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK150] gi|332362443|gb|EGJ40243.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1056] Length = 219 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 108/196 (55%), Gaps = 15/196 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I+ IS V+S I G +AV+R + ++ LI Y+ R P L+ +F IF Sbjct: 22 LTLQISFISIVLSTIFGTILAVMR-NGKNKLLKLIASIYIEFVRNVPNLLWIFTIF---- 76 Query: 83 HIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 +VF S A IIS T+ SA ++EIIR + +I GQ +A + G T+ Q +R II Sbjct: 77 ---LVFQIKSTPAGIISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRFII 133 Query: 141 LPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 LPQ I + S+F++++K TS+ S I + E+F +AQ ++ ++ ++ +Y Sbjct: 134 LPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFA----LY 189 Query: 200 LILTSFCYIIQIKIES 215 L++ + ++I I S Sbjct: 190 LLVAAIYFLINFAISS 205 >gi|241554154|ref|YP_002979367.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863460|gb|ACS61122.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 252 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 111/224 (49%), Gaps = 3/224 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+I +P + TL ++ +S ++ + A+ R+ S ++ + V+ Sbjct: 13 WLLLLIGQYPNGPLGGLANTLILSALSIALAFPVSILFALARLSRSP-LLRWPVTALVYF 71 Query: 65 FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RG PLL+ + ++ +P + G SFV ++ +L + SA++SE++R+ I+++ GQ D Sbjct: 72 TRGVPLLMLILWSYFLVPLLTGADVPSFVTMLTTLVVYQSAFLSEVVRAGIVALGPGQMD 131 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIV 182 A A+G +R IILPQ + + S F+S +K T++ I +P++ F +Q Sbjct: 132 AGRALGHGYLGAMRFIILPQALYNMIPSIISTFVSTIKDTTLGYVINVPDLTFAASQVNN 191 Query: 183 STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 QP ++ LA VY + ++E S+T+ + Sbjct: 192 QLLTQPFQVFLILAIVYFAICWTLTYFANRLERSITRRRAGLSN 235 >gi|94500103|ref|ZP_01306637.1| ABC-type arginine transport system, permease component [Oceanobacter sp. RED65] gi|94427676|gb|EAT12652.1| ABC-type arginine transport system, permease component [Oceanobacter sp. RED65] Length = 220 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 18/162 (11%) Query: 61 YVWIFRGTPLLVQLFVIFYGLP------------------HIGIVFDSFVAIIISLTLNF 102 Y + RG P LV + +IF+G I I D FVA +I++ F Sbjct: 39 YTTLIRGVPDLVLMMLIFFGGQIAFNSFTEWLYFASDEQIDIFINIDEFVAGVITIGFIF 98 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 AY++E R + I++ GQ +A+ A G+ R Q I+ PQ + + L + + +LK+ Sbjct: 99 GAYMTETFRGAFIAVDVGQIEAAKAYGMNRWQVFTRIMFPQMMRHALPGLGNNWQVLLKT 158 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 T++ S I + ++ + A TT +P + +AFVYL+LT+ Sbjct: 159 TALVSVIGLADMVRLATEAAKTTGEPFLFLIPVAFVYLMLTA 200 >gi|308094386|ref|ZP_05888982.2| general L-amino acid transport system permease protein AapM [Vibrio parahaemolyticus AN-5034] gi|308094323|gb|EFO44018.1| general L-amino acid transport system permease protein AapM [Vibrio parahaemolyticus AN-5034] Length = 349 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 8/195 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFV 76 + ++VTL IA + V+SL IG +A+ R SD II I Y+ ++RG PL+ LF+ Sbjct: 139 WGGLLVTLIIALVGIVVSLPIGVALALGR--RSDMPIIRSICTIYIEVWRGVPLITVLFM 196 Query: 77 IFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G D + +I + + +AY++E++R + +IPKGQ++A+ A+GL+ Sbjct: 197 ASVMLPLFLAEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYW 256 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + IILPQ + + + + FI + K TS+ I + ++ Q +T + L Sbjct: 257 KKTGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPEWLGFAT 315 Query: 194 E-LAFVYLILTSFCY 207 E FV L+ FC+ Sbjct: 316 ESYVFVALVFWVFCF 330 >gi|262368885|ref|ZP_06062214.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046] gi|262316563|gb|EEY97601.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046] Length = 227 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 57/169 (33%), Positives = 97/169 (57%), Gaps = 9/169 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ + +TL + I+ + + IG +A++R+ S I++LI YV +FR PLL+ L Sbjct: 18 LWHGLSITLKVVIIATIGGIFIGTLLALMRLS-SIRILNLIAQGYVNLFRSIPLLLVLMW 76 Query: 77 IFYGLPHI-----G--IVFD-SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 ++ +P I G + D + V+ I++ L +AY SEI+R+ I SIPKGQ A+YA+ Sbjct: 77 FYFAVPFIYTTVTGNYLTIDTALVSSIVAFMLFEAAYFSEIVRAGIQSIPKGQSAAAYAL 136 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 G+T Q++R IILPQ L + I + + +++ I + + F+T Sbjct: 137 GMTYGQSMRLIILPQAFRKMTPLLLQQTIILFQDSTMVYAIGLLDFFRT 185 >gi|145297728|ref|YP_001140569.1| arginine transporter permease subunit ArtM [Aeromonas salmonicida subsp. salmonicida A449] gi|142850500|gb|ABO88821.1| ABC-type arginine transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 220 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 89/167 (53%), Gaps = 20/167 (11%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYG---------LPHIGIVFDSFVAIIISLTLNFS 103 + + ++ +V IF GTPLL+Q+F+I+YG P ++ + +++L N + Sbjct: 43 VATQLVQLWVLIFTGTPLLIQIFLIYYGPGQFEWLKSGPLWPLLKQPWFCAVLALGFNTA 102 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQT----IRHIILPQTITTSAVPL-SSEFIS 158 AY + + + ++ +IP G+ +A A+G + QT +RH VP S+E I Sbjct: 103 AYSTRLFKGALDAIPSGEVEACRALGFSAGQTLWMKVRHA------ARRLVPAYSNEVIL 156 Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSF 205 +LK +S+ASTITI ++ AQR+ + TY L ++ +YL + Sbjct: 157 VLKGSSLASTITIMDVMGLAQRLNAQTYDTLAVFTVAGALYLTMNGL 203 >gi|311898351|dbj|BAJ30759.1| putative amino acid ABC transporter substrate-binding protein [Kitasatospora setae KM-6054] Length = 315 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 109/215 (50%), Gaps = 23/215 (10%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF- 78 A+ +T+ + V+ +G +A +R+ S I+ I YVW FR PL+VQL F Sbjct: 73 AVGMTIQLTVYGTVLGFALGAVVAALRLSGSP-ILRTIAWTYVWAFRSIPLIVQLVFWFN 131 Query: 79 ----YGLPHIGIVFD-SFV------------AIIISLTLNFSAYISEIIRSSIISIPKGQ 121 Y IGI F SFV A ++ L L+ +AY +EIIR ++S+ GQ Sbjct: 132 LSYLYKRFGIGIPFGPSFVSFETMDLLGALGAAVLGLALHQAAYAAEIIRGGVLSVDAGQ 191 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ A+G+ + + I++PQ + ++E +S+ K TS+ + I E+F Q I Sbjct: 192 LEAAAALGIPKFRQAWRIVVPQAMRGILPNAANEVVSLFKGTSIVYVMAIGELFYQVQVI 251 Query: 182 VSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 T + PL++ + Y++LT+ ++Q +E Sbjct: 252 YGRTGRVVPLLMVATV--WYVLLTTALSLVQYYVE 284 >gi|289626489|ref|ZP_06459443.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330868339|gb|EGH03048.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 324 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 24/215 (11%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY----------G 80 S V S+I+G +A+ R+ S + +L Y+W FR P L+ L +++ G Sbjct: 94 STVFSIILGTALALARLSGSPLLAALAWG-YIWFFRSMPALLVLIILYNFAYLYDHIVLG 152 Query: 81 LPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +P +VF F ++ L+L +AY +EIIR +I + GQ +A+ A+GL Sbjct: 153 VPFTDLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAALGLP 212 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PL 189 + + IILPQ + + +E I ++K TS+ + +PE+F T Q I + T PL Sbjct: 213 ASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPL 272 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 +I + YLI+T Q +E + T V Sbjct: 273 LIVATV--WYLIITMLLTSAQYYVERHFARGTARV 305 >gi|239978685|ref|ZP_04701209.1| ABC transporter permease [Streptomyces albus J1074] gi|291450580|ref|ZP_06589970.1| ABC transporter permease [Streptomyces albus J1074] gi|291353529|gb|EFE80431.1| ABC transporter permease [Streptomyces albus J1074] Length = 304 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 27/225 (12%) Query: 3 YEWFNLIIDSF--PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++W ++ D F P +L + +TL + + V+ ++G +AV R+ ++ ++ + Sbjct: 66 FQW-GVVADYFTTPAVLRG-LGLTLWLTALVMVLGFVLGTLLAVARMS-ANPVLKSVSWG 122 Query: 61 YVWIFRGTPLLVQL---FVIFYGLPHIGI---------------VFDSFVAIIISLTLNF 102 Y+W FR TP+LVQL F I P +G+ + +I LTL+ Sbjct: 123 YIWFFRSTPVLVQLLFWFNIGALYPQLGLGIPFGPEFLTVRTVNLLGPLTVALIGLTLHE 182 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY +E++R ++S+ +GQ +A+ ++GL R + +R I+LPQ + P + I LK Sbjct: 183 AAYAAEVVRGGLLSVDRGQTEAAQSLGLGRWRRLRRIVLPQAMRAIVPPAGNMLIGTLKG 242 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCEL--AFVYLILT 203 TS+ S I + ++ + Q + TYQ PL++ L A V +LT Sbjct: 243 TSIVSVIAVQDLLYSVQLVYHRTYQVIPLLLVATLWYALVTTVLT 287 >gi|322377818|ref|ZP_08052307.1| amino acid ABC transporter, permease protein [Streptococcus sp. M334] gi|321281241|gb|EFX58252.1| amino acid ABC transporter, permease protein [Streptococcus sp. M334] Length = 219 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 11/192 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +TL I+ I+ V++ +IG +AV+R + I+ +I Y+ R P L+ +F Sbjct: 16 IFKGFGLTLYISLIAIVLATLIGTVLAVMR-NGKNPILRIISSIYIEFVRNVPNLLWIFT 74 Query: 77 IFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF +VF S A I + TL SA ++EIIR + ++ KGQ++A + G T Q Sbjct: 75 IF-------LVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQ 127 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYC 193 + HIILPQ I + S+F++++K TS+ S I + E+F +Q ++ ++P ++ Sbjct: 128 ILYHIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFEPEQVFS 187 Query: 194 ELAFVYLILTSF 205 + LI SF Sbjct: 188 LYILIALIYFSF 199 >gi|229589728|ref|YP_002871847.1| putative ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229361594|emb|CAY48471.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 261 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 12/166 (7%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLP---HIG---IVFDSFVAIIISLTLNFSAYI 106 ++ L +V IFR P LV ++ Y P H+G I F +V + I L L SA + Sbjct: 85 VLRLPARIWVQIFRNAPWLVLIYFTTYVFPFEIHVGSAYISFPDWVKVTIGLALPASANV 144 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EI R +I SIP QW+A+ ++ TR Q R IILPQ P + + I T++A Sbjct: 145 AEIFRGAIASIPSTQWEAARSLAFTRGQIFRSIILPQCFKRMLPPWMNLYAVITMGTALA 204 Query: 167 STITIPEIFQTAQ---RIVSTTYQPLIIYCELAFVYLILTSFCYII 209 S + + ++ TAQ V+ T ++IY L ++ ++CY I Sbjct: 205 SLVGVHDVIDTAQIASNTVNMTGFTVVIYLSLLVLFF---AYCYPI 247 >gi|227325811|ref|ZP_03829835.1| Polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 407 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 103/189 (54%), Gaps = 6/189 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L AA++++L + ++ + +G + R+ + II L + VW G P + Sbjct: 204 LLAAVLISLILKRVARYMRENVGRSLPTGRLTLA-AIIGLPL--LVWWLSGAPAELDR-P 259 Query: 77 IFYGLPHIG--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 I G G V F A+++ + L SA+I+EI+R+ I SIPKGQ +A+ A+ + Sbjct: 260 ILRGFNFRGGFTVSPEFTALLLGIALYSSAFIAEIVRAGIQSIPKGQLEAARALSFSPWH 319 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 +RHII+PQ + PL+S+++S+ K++S+A + PE+ + +++ T Q L + Sbjct: 320 MMRHIIIPQAMRVIVPPLTSQYVSLSKNSSIAVVVGYPELANISNTLMNQTGQALEVIAI 379 Query: 195 LAFVYLILT 203 + VYL ++ Sbjct: 380 MMVVYLTVS 388 >gi|254245861|ref|ZP_04939182.1| Amino acid ABC transporter, permease protein [Burkholderia cenocepacia PC184] gi|124870637|gb|EAY62353.1| Amino acid ABC transporter, permease protein [Burkholderia cenocepacia PC184] Length = 253 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 107/217 (49%), Gaps = 16/217 (7%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F +L+A V T+ ++ +S ++ +G AV ++ + ++ I Y + R P L Sbjct: 29 GFGPVLWAGTVQTIELSVLSLATAVALGLIGAVAKLS-HNRVLRAIATGYTTLIRSVPDL 87 Query: 72 VQLFVIFY-------------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 V + ++FY G I I D FVA +++L + AY +E R + +S+P Sbjct: 88 VLMLLLFYSIQIWLNQFTDLVGWNQIDI--DPFVAGVLTLGFIYGAYFTETFRGAFLSVP 145 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + A Sbjct: 146 RGQLEAGSAYGMSGARVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAA 205 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q +T+ A +YL +T+ ++ I++E Sbjct: 206 QDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLEK 242 >gi|75675719|ref|YP_318140.1| amino acid ABC transporter, inner membrane component [Nitrobacter winogradskyi Nb-255] gi|74420589|gb|ABA04788.1| amino acid ABC transporter membrane protein 2, PAAT family [Nitrobacter winogradskyi Nb-255] Length = 506 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 15/215 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQ 73 L+ ++VTL ++ V S+ IG +A+ R + + LI F ++ +RG PL+ Sbjct: 293 LWGGLLVTLVVSVTGIVSSIPIGIALALGR----RSTLPLIRVFSIAFIEFWRGVPLITV 348 Query: 74 LFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LF Y LP D V ++I + L AY +E+IR + ++P GQ +A++A+GL Sbjct: 349 LFFATYMLPLFLPGNFTVDGLVRVLIGIALFAGAYNAEVIRGGLAAVPGGQAEAAHALGL 408 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ--TAQRIVSTTYQP 188 + +T I++PQ + L + FI++ K TS+ S + + ++ A T P Sbjct: 409 SYWKTTGLIVMPQAVRHVIPGLVNSFIALFKDTSLVSIVALFDLLGILRASFADPTWATP 468 Query: 189 LIIYCELAFVYLILTSFCYII---QIKIESSVTQH 220 ++ AF LI +FC+ I + +E + H Sbjct: 469 TTLFTGFAFTGLIYFAFCFSISRYSLFVEHRLNAH 503 >gi|295693351|ref|YP_003601961.1| amino acid ABC transporter, permease protein [Lactobacillus crispatus ST1] gi|295031457|emb|CBL50936.1| Amino acid ABC transporter, permease protein [Lactobacillus crispatus ST1] Length = 223 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 105/194 (54%), Gaps = 5/194 (2%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L+ A + ++ IA +S VI L +G ++R F + + ++ Y+ FR P Sbjct: 13 SNFARLM-AGLWTSIWIAALSLVIGLAVGTIFGILRTF-KNRPLRFVLRLYLEFFRIVPT 70 Query: 71 LVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +V L++++Y LP + + + + +++ ++ +A S+I+R ++ S+PK Q ++ A+G Sbjct: 71 VVLLYLVYYILPRSLHVNWPATWMAVLAFSMWVAAEFSDIVRGALESVPKTQRESGLALG 130 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ-- 187 L R Q R+++LPQ + + ++K+TS+ I I E+ Q+I+ Q Sbjct: 131 LNRLQLFRYVLLPQAVKLELPATINLATRVIKTTSLLMIINIMEVINVGQQIIEANNQQY 190 Query: 188 PLIIYCELAFVYLI 201 P ++ F++++ Sbjct: 191 PAGVFWVYGFIFIL 204 >gi|300784268|ref|YP_003764559.1| amino acid ABC transporter permease [Amycolatopsis mediterranei U32] gi|299793782|gb|ADJ44157.1| permease component of ABC-type amino acid transport system [Amycolatopsis mediterranei U32] Length = 215 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/193 (29%), Positives = 102/193 (52%), Gaps = 2/193 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + +S V +L+ G +A++R+ + + YV I R TPL + + P Sbjct: 18 TIELFVLSAVGALVWGTILAMLRVS-PVPVFRAVGTAYVTIARNTPLTLVFAFFVFAYPL 76 Query: 84 IGIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + IV D F A +++LT+ SA+I E++RS I ++P GQ +A A+GLT Q + ++LP Sbjct: 77 LDIVKLDYFPAAVVALTVYTSAFICEVVRSGINTVPVGQAEAGRALGLTFGQILGQVVLP 136 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + + PL S I++LK+T++A+ ++ E + L+ +A ++IL Sbjct: 137 QALRSVVPPLISTLIALLKNTTIAAGFSVAEAGAIRAYLSERGESQLVGLLWVALGFIIL 196 Query: 203 TSFCYIIQIKIES 215 + +Q +E Sbjct: 197 VAVLSFVQRSLEK 209 >gi|289647160|ref|ZP_06478503.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 324 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 24/215 (11%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY----------G 80 S V S+I+G +A+ R+ S + +L Y+W FR P L+ L +++ G Sbjct: 94 STVFSIILGTALALARLSGSPLLAALAWG-YIWFFRSMPALLVLIILYNFAYLYDHIVLG 152 Query: 81 LPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +P +VF F ++ L+L +AY +EIIR +I + GQ +A+ A+GL Sbjct: 153 VPFTDLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAALGLP 212 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PL 189 + + IILPQ + + +E I ++K TS+ + +PE+F T Q I + T PL Sbjct: 213 ASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPL 272 Query: 190 IIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 +I + YLI+T Q +E + T V Sbjct: 273 LIVATV--WYLIITMLLTSAQYYVERHFARGTARV 305 >gi|330505509|ref|YP_004382378.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas mendocina NK-01] gi|328919795|gb|AEB60626.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina NK-01] Length = 231 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 84/154 (54%), Gaps = 11/154 (7%) Query: 61 YVWIFRGTPLLVQLFVIFYG----LPHIG-------IVFDSFVAIIISLTLNFSAYISEI 109 Y I RG P L+ + +I++ L +G + F A +I+L L F AY +E+ Sbjct: 55 YSTIVRGVPELLWVLLIYFSTVNVLRALGESLGVGSLELSPFAAGVIALGLCFGAYATEV 114 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R +I++IPKG +A A+G+++ + + +I+PQ + L + F+ ++K T++ S + Sbjct: 115 FRGAILAIPKGHREAGQALGMSKGRILWKLIMPQMWRIALPGLGNLFMILMKDTALVSVV 174 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + EI + AQ V+ T P+ + A +YL LT Sbjct: 175 GLTEIMRQAQIAVTATKNPMTFFLVAAIIYLGLT 208 >gi|218507648|ref|ZP_03505526.1| octopine ABC transporter, permease protein [Rhizobium etli Brasil 5] Length = 152 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 82/142 (57%), Gaps = 9/142 (6%) Query: 71 LVQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 ++Q+F++FYGL G++ SF V ++SL L + Y +EI R I ++ + Sbjct: 1 MIQMFLVFYGLGQFGVIRYSFLWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRAVSPKE 60 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ +IG++ +R I+ P + S+E + ++KST++AS +T+ E+ AQR+ Sbjct: 61 IEAARSIGMSGFLMVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRL 120 Query: 182 VSTTYQPLIIYCELAFVYLILT 203 +S TY+ + ++ A +YL+L Sbjct: 121 ISQTYRTMEVFLCAAIIYLVLN 142 >gi|311695085|gb|ADP97958.1| amino acid ABC transporter, permease protein [marine bacterium HP15] Length = 362 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 109/199 (54%), Gaps = 12/199 (6%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFV 76 + +++TL +A I + SL IG +A+ R SD II I ++ ++R PL+ LF+ Sbjct: 152 WGGLMLTLILAYIGIIASLPIGILLALGRR--SDMPIIRGICVVFIEVWRAVPLITVLFM 209 Query: 77 IFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G+ F+ +I +TL SAY++E+IR + +IP+GQ++A+ A+GL Sbjct: 210 ASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYW 269 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST-TYQPLII- 191 + + +ILPQ + + + FIS+ K T++ I + +I T Q V+ +Q + I Sbjct: 270 RKMGLVILPQALKMVIPGIVNTFISLFKDTTLVLIIGLFDILGTVQSTVTDPAWQNVAIE 329 Query: 192 -YCELAFVYLILTSFCYII 209 Y +AF + + FC+ I Sbjct: 330 GYVFVAFCFWV---FCFGI 345 >gi|224825591|ref|ZP_03698696.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] gi|224602512|gb|EEG08690.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] Length = 237 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 11/177 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL + S I ++ +AV R+ + +I + FY ++FRGTPL +QL V + Sbjct: 22 GVAMTLWLLTASIAIGFVLAVPLAVARVS-PNPLIRGPVWFYTYVFRGTPLYIQLLVFYT 80 Query: 80 GLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 G+ I V D+F +++ LN AY EI +I + P G+ +A+ A G Sbjct: 81 GIYSIESVRAQPLLDAFFREGINCTLLAFALNTCAYTVEIFAGAIRATPYGEIEAARAYG 140 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++ R +ILP + + S+E I +L ST++A T T+P+I + A+ + S TY Sbjct: 141 MSSFTLYRRVILPSALRRALPYYSNEVILMLHSTTLAFTATVPDILKVARDVNSATY 197 >gi|186473669|ref|YP_001861011.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184196001|gb|ACC73965.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 218 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 97/180 (53%), Gaps = 1/180 (0%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL + +SF ++ + +R + + + + + FR P +V LF+IF+G+ Sbjct: 20 TLAMTGLSFAFGALLAIPLCGLRTAHNPVLRNCALSL-ILTFRSIPPIVWLFLIFFGVGS 78 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 I FV+ +I L L +A ++EI R ++ ++P GQ++A+ A+GL +++PQ Sbjct: 79 DLIPLSPFVSAVIGLGLITAANVAEIYRGALKAVPAGQYEAARALGLPALLQYHDVLIPQ 138 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + L++ I +LK T+VASTI + ++ +A R+ T++ + +Y VY +++ Sbjct: 139 IFRLALPSLATYAIGLLKDTAVASTIGVHDLAFSAYRVSQETFRGIEVYAAFGLVYFLIS 198 >gi|54288386|gb|AAV31674.1| predicted abc-type amino acid transport system permease component [uncultured alpha proteobacterium EBAC2C11] Length = 227 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 11/207 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L AA T+ ++ I+F+ + I ++RI S + + ++WIF+ PLL+ LF+ Sbjct: 20 LLAAARFTIYLSLIAFIGGGAVACIITLLRISKSPAL-QKVAALFIWIFQSVPLLMLLFL 78 Query: 77 IFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I G+P + I D + A +L L +AY++E+ R ++ S+ KGQW+ASYA+ + Sbjct: 79 IGLGMPGLLDINIDPWTAATCALVLFTAAYLAEVWRGAVESVAKGQWEASYALNIKYSLL 138 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST---TYQPLIIY 192 +R +I PQ I P + I+K TS+A I ++ +R + +P +++ Sbjct: 139 LRKVIFPQAIKFGIAPTVGFMVQIIKGTSLAYIIGFNDLMLAGKRWANAPVPGSEPFVVF 198 Query: 193 CELAFVYLILTSFCYIIQI---KIESS 216 +A +Y + CY + + K+E+ Sbjct: 199 PLMAVMYFCI---CYPLALFARKLEAK 222 >gi|296272119|ref|YP_003654750.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter nitrofigilis DSM 7299] gi|296096294|gb|ADG92244.1| polar amino acid ABC transporter, inner membrane subunit [Arcobacter nitrofigilis DSM 7299] Length = 359 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 98/185 (52%), Gaps = 7/185 (3%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 L ++ P + +++T+ +A + V+S IG A+ R + II I Y+ R Sbjct: 139 GLGLEVVPTTKWGGLMLTMVVASVGIVVSFPIGIIFALGRQS-NMPIIKTISVLYIEFIR 197 Query: 67 GTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 G PL+ LF+ LP G+ FD + +I +TL +AY++E++R + +IPKGQ++ Sbjct: 198 GVPLITLLFMSSVILPLFFPEGVTFDKLLRALIGVTLFQAAYLAEVVRGGLQAIPKGQYE 257 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ ++GL+ Q + +ILPQ + S + F+++ K T++ + I +F + Sbjct: 258 AADSVGLSYWQAMGLVILPQALKISIPNIVGSFVALFKDTTL---VLIIGLFDVLAMVTL 314 Query: 184 TTYQP 188 TT P Sbjct: 315 TTSDP 319 >gi|253987652|ref|YP_003039008.1| amino acid ABC transporter permease [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779102|emb|CAQ82262.1| similar to amino acid permease component of abc transporter [Photorhabdus asymbiotica] Length = 247 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/204 (25%), Positives = 108/204 (52%), Gaps = 9/204 (4%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV---IRIFFSDTIISLIMHF 60 W L+ +FP +TL I+ I+ VIS+++G V ++ F +++ ++ F Sbjct: 9 NWRYLLFGTFPDGPLEGAALTLVISLIAGVISIVLGTVAGVALAMQKGFWVNLLAAVLGF 68 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FR P+++ +F ++ LP +G+ ++ +L L SAY++ +++ II+I Sbjct: 69 ----FRAIPVIMLIFWTYFLLPVMLGMEIPEITTVVCALALITSAYLAHGVKAGIIAIGA 124 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTA 178 GQW A ++G R Q + +I+LPQ + +++I+++K TS+A + + E+ F Sbjct: 125 GQWQAGLSLGFNRWQVLWYIVLPQALRMMVPSFINQWIALIKDTSLAYIVGVAELSFLAT 184 Query: 179 QRIVSTTYQPLIIYCELAFVYLIL 202 Q + P ++ +AF+Y ++ Sbjct: 185 QVNNRSMVYPTEVFLFVAFIYFVM 208 >gi|300697545|ref|YP_003748206.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum CFBP2957] gi|299074269|emb|CBJ53814.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum CFBP2957] Length = 250 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 106/202 (52%), Gaps = 3/202 (1%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 + W L++ +P I TL ++ + ++ + +A+ R+ + + + Sbjct: 11 RDNWLLLLVGQYPNGPLGGIACTLILSVLGIGLAFPLSVLLALARLSPWRPLHASVTAL- 69 Query: 62 VWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V++ RG PLL+ + +++ +P IG F ++ +L + Y+SE++R+ I ++PKG Sbjct: 70 VYVVRGVPLLMWILWVYFLVPLLIGNNVSGFTTMVCTLVIYEGVYLSEVVRAGIEALPKG 129 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+G + +R +ILPQ + + ++F+S +K T++ I +PE+ A + Sbjct: 130 QMEAARALGHSYFGAMRLVILPQALYNMLPSMLAQFVSTIKETTLGYVINVPELTFAANQ 189 Query: 181 IVSTTY-QPLIIYCELAFVYLI 201 I + +P I+ LA +Y + Sbjct: 190 INNALLSKPFQIFFMLAVIYFV 211 >gi|222102718|ref|YP_002539757.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] gi|221739319|gb|ACM40052.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] Length = 228 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 25/159 (15%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIIS----------------LTLNFSAYISE 108 FRGTPLLVQL++ ++G +G V + AI S L+LN +AY +E Sbjct: 59 FRGTPLLVQLYIFYFG---VGQVLATVPAIRYSPLWPLLRSANGYAYVVLSLNTAAYCAE 115 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I R +I+ +P GQ +A ++GL++++ I+LPQ + + + I +LK T++ + Sbjct: 116 IWRGAILGLPIGQSEAGRSLGLSKQRITVSILLPQAFRLALPAIGGQNILLLKGTALTAA 175 Query: 169 ITIPEIFQTAQRIVS---TTYQPLIIYCELAFVYLILTS 204 IT+ E TA + + TY+PL+ A VY +L S Sbjct: 176 ITVFETMATANLVRAQTFRTYEPLL---AAALVYFVLAS 211 >gi|332358958|gb|EGJ36779.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK49] Length = 219 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 108/196 (55%), Gaps = 15/196 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I+ IS V+S I G +AV+R ++ LI Y+ R P L+ +F IF Sbjct: 22 LTLQISFISIVLSTIFGTILAVMR-NGKTKLLKLIASIYIEFVRNVPNLLWIFTIF---- 76 Query: 83 HIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 +VF S A IIS T+ SA ++EIIR + +I GQ +A + G T+ Q +R+II Sbjct: 77 ---LVFQIKSTPAGIISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRYII 133 Query: 141 LPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 LPQ I + S+F++++K TS+ S I + E+F +AQ ++ ++ ++ +Y Sbjct: 134 LPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFA----LY 189 Query: 200 LILTSFCYIIQIKIES 215 L++ + ++I I S Sbjct: 190 LLVAAIYFLINFAISS 205 >gi|238793127|ref|ZP_04636755.1| ABC-type amino acid transport system permease component [Yersinia intermedia ATCC 29909] gi|238727500|gb|EEQ19026.1| ABC-type amino acid transport system permease component [Yersinia intermedia ATCC 29909] Length = 251 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 106/201 (52%), Gaps = 3/201 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ +FP +TL I+ ++ V S I+G + V+ + S + + ++ ++ Sbjct: 9 NWTYLLWGTFPDGPLGGAALTLLISIMAGVASAILGTVLGVL-LAMSRGVWAGVLAAFLG 67 Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FR P+++ +F ++ LP + G+ ++ +L L SAY++ +++ I++I GQW Sbjct: 68 FFRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIVAIGAGQW 127 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRI 181 A ++G R Q + ++LPQ + +++IS++K TS+A + + E+ F Q Sbjct: 128 QAGLSLGFNRWQVLWFVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQVN 187 Query: 182 VSTTYQPLIIYCELAFVYLIL 202 + P+ ++ +A VY +L Sbjct: 188 NRSMVYPMEVFLFVALVYFVL 208 >gi|85057545|ref|YP_456461.1| ABC-type amino acid transport system, permease component [Aster yellows witches'-broom phytoplasma AYWB] gi|84789650|gb|ABC65382.1| ABC-type amino acid transport system, permease component [Aster yellows witches'-broom phytoplasma AYWB] Length = 233 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 89/170 (52%), Gaps = 2/170 (1%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV--FDSFVAIIISLTLNFSAYISEIIR 111 I ++++FY++ + P+++Q ++++G G F A + L N A ++E + Sbjct: 63 IDILLYFYIFFVKSVPMMLQAMLLYWGTKIAGFCSWLTPFQAALFILIFNSCAMLAEFMI 122 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 ++ GQ +AS A+G+ RKQT + +I PQ + S + + +EFI +K V IT+ Sbjct: 123 KNMSFFDPGQIEASLALGMNRKQTFKCVICPQLVNQSLLRIINEFILNIKDICVFYVITV 182 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 +IF +Q++ +Y + Y + +Y+IL Y + K+E+ + Sbjct: 183 VDIFTLSQKLAKKSYDYVTPYINASLIYIILIFISYYLLKKLETKLGNKN 232 >gi|311107044|ref|YP_003979897.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 13 [Achromobacter xylosoxidans A8] gi|310761733|gb|ADP17182.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 13 [Achromobacter xylosoxidans A8] Length = 251 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 86/164 (52%), Gaps = 10/164 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI----------GIVFDSFVAIIISLTLNFSAYISEII 110 YV +FR PL+VQ+F+ ++ LP + + SF +++ + SA I E + Sbjct: 68 YVEVFRNIPLIVQMFLWYFVLPELLPTAAGDWIKQLPDASFYTAALAIGMYMSARIGEQL 127 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R+ I ++P+GQ +A A+GLT Q RH++LP + T ++S+ ++ +K+TSVA TI Sbjct: 128 RAGIEALPQGQRNAGLALGLTLPQLYRHVLLPNALRTVLPTMTSDCLNTIKNTSVALTIG 187 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + E+ A + ++Q + YL L ++ +E Sbjct: 188 LAELTAQAHAMQEFSFQVFEAFLTATMAYLALNLIVIVVMRALE 231 >gi|326803173|ref|YP_004320991.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] gi|326651192|gb|AEA01375.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] Length = 233 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 52/173 (30%), Positives = 97/173 (56%), Gaps = 18/173 (10%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVA-------------IIISLT 99 I++ ++ ++ RG PL+V LF+I Y LP++ F + + II++ T Sbjct: 50 IVNQLLEIFISYMRGVPLIVHLFIIRYSLPNVAASFMNLLGFGMEPSEFPNILLIIVAFT 109 Query: 100 LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL-SSEFIS 158 L +A SE IR ++ ++ K Q +A+ +IG+T+KQ+++ II PQ +T A+PL + ++ Sbjct: 110 LLEAAIESENIRGALNAVSKDQVEAALSIGMTKKQSLQRIIFPQALTV-AIPLFLNAYLK 168 Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 +K S+A T+ + +I A+ + +Y L Y A VY ++ C ++Q+ Sbjct: 169 AIKIQSLAFTVGVVDILTQARFAAALSYHYLESYLTAALVYWLI---CGLLQV 218 >gi|241762911|ref|ZP_04760974.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] gi|241368086|gb|EER62291.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] Length = 273 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/225 (25%), Positives = 110/225 (48%), Gaps = 16/225 (7%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F + + P LL + V + I+ ++ + +G + + + + +++ YV +F Sbjct: 52 FTYLWNWLPALLRG-LGVNIQISVLAVALGTAVGLVVGALSLSPVHAV-RVVVRSYVQVF 109 Query: 66 RGTPLLVQLFVIFYGLP-HIGIV-----FDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 R P+LV ++ Y P + +V F +V +++ L L SA ++EI R +I SIP Sbjct: 110 RNAPILVLIYFTTYVFPFEVHLVSWTFPFPDWVKVVLGLALPTSANVAEIFRGAIQSIPS 169 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 QW+A+ ++ R Q R ++LPQ + P + + SI STS+AS + + ++ TAQ Sbjct: 170 AQWEAAQSLAFRRSQIFRLVVLPQCVRRMLPPWMNLYASITMSTSLASLVGVHDVVDTAQ 229 Query: 180 ----RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + T + L+ + LA + ++CY I + +H Sbjct: 230 IASNTVARTDFTILVYFTLLALFF----AYCYPIARATRALEKRH 270 >gi|298486962|ref|ZP_07005015.1| glutamate/aspartate transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158524|gb|EFH99591.1| glutamate/aspartate transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 246 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 87/149 (58%), Gaps = 5/149 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V++ RG PLL+ +F ++ +P IG F ++ +L + SAY+ EIIR +I ++P Sbjct: 67 WVYVMRGIPLLMVIFWTYFLVPLLIGHNITGFTTMLCTLVVYQSAYLCEIIRGAIQALPA 126 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++AS A+G+ +T +ILPQ + + L S+FISI+K TS+ I + E+ A Sbjct: 127 GQYEASRALGMGYMRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINVQEVTFAAN 186 Query: 180 RIVSTTY-QPLIIYCELAFVYLILTSFCY 207 +I + +P ++ LA Y +L CY Sbjct: 187 QINNQLLTKPFQVFFILAITYYVL---CY 212 >gi|123966464|ref|YP_001011545.1| ABC transporter for amino acids, membrane component [Prochlorococcus marinus str. MIT 9515] gi|123200830|gb|ABM72438.1| ABC transporter for amino acids, membrane component [Prochlorococcus marinus str. MIT 9515] Length = 297 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 110/217 (50%), Gaps = 25/217 (11%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D++ ++ + +L + S +++ +G I +R+ ++ + Y+ + R TPL Sbjct: 63 DNYAWAIFIGWMNSLKVIISSLILATCLGTLIGFLRVG-KNSFFRIFTAGYITVIRQTPL 121 Query: 71 LVQLFVIFY-----------------------GLPHIGIVFDS-FVAIIISLTLNFSAYI 106 L+QL ++ G+ G+ F S F A++ L++ SA+I Sbjct: 122 LIQLMCWYFVGFLSIRNNSFLNVRNIVNISNRGIELFGLNFSSEFSALLFGLSIFSSAFI 181 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +E+IR I S+P GQW+A ++G++ KQ II+PQ + L+S+++++ K++++A Sbjct: 182 AEVIRGGIQSVPLGQWEAFRSLGISEKQGFIKIIIPQALPAFIPGLTSQYLNLAKNSTLA 241 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + +I+ I++ T + L + L F +LIL Sbjct: 242 IAVGYSDIYAINDTIINQTGRALECFIILLFSFLILN 278 >gi|330816078|ref|YP_004359783.1| histidine ABC transporter, permease protein HisM [Burkholderia gladioli BSR3] gi|327368471|gb|AEA59827.1| histidine ABC transporter, permease protein HisM [Burkholderia gladioli BSR3] Length = 237 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 13/196 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VTL + S I + +AV R+ +S+ + Y ++FRGTPL VQL +I+ Sbjct: 21 SGLAVTLWLLVASIGIGFVCAIPLAVARVS-RKRWLSMPVRAYTYVFRGTPLYVQLLLIY 79 Query: 79 YGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + V D+F I++ LN AY +EI +I + G+ +A+ A Sbjct: 80 TGMYSLEFVRSHSLLDAFFRSGFHCAILAFALNTCAYTTEIFAGAIRATSHGEVEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 G+ R +ILP + A+PL S+E I +L +T+VA T T+P+I + A+ S TY Sbjct: 140 GMGGWTLYRRVILPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYM 198 Query: 188 PLIIYCELAFVYLILT 203 + A +YL ++ Sbjct: 199 AFQSFGIAALIYLAVS 214 >gi|197284335|ref|YP_002150207.1| glutamate/aspartate ABC transporter permease [Proteus mirabilis HI4320] gi|227358521|ref|ZP_03842846.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Proteus mirabilis ATCC 29906] gi|194681822|emb|CAR41082.1| glutamate/aspartate ABC transporter, permease protein [Proteus mirabilis HI4320] gi|227161232|gb|EEI46306.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Proteus mirabilis ATCC 29906] Length = 224 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 114/210 (54%), Gaps = 11/210 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 +++W + ++ S P L +V+TL I + VI ++ G +AV+R+ + IS Y Sbjct: 3 EFDWSS-VVPSLP-FLMDGMVITLKITITAIVIGILWGTILAVMRLS-TFKPISWFAAAY 59 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-----GIVFDS---FVAIIISLTLNFSAYISEIIRSS 113 V FR PL++ L + +P+I G+ S ++ +++ +L +AY SEIIR+ Sbjct: 60 VNTFRSIPLVMVLLWFYLIVPNILQNVLGLSPKSDIRLISAMVAFSLFEAAYYSEIIRAG 119 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SI KGQ+ AS A+G+T+ QT+R +ILPQ L ++ I + + TS+ +++ + Sbjct: 120 IQSISKGQFSASLALGMTKSQTMRLVILPQAFRAMIPLLLTQGIVLFQDTSLVYVLSLTD 179 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 F+TA I + + FVY I++ Sbjct: 180 FFRTAANIGERDGTQVEMILFAGFVYFIIS 209 >gi|330889584|gb|EGH22245.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Pseudomonas syringae pv. mori str. 301020] Length = 236 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 95/182 (52%), Gaps = 13/182 (7%) Query: 35 SLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL---------P 82 S+ IGF +++ I + + + FY ++FRGTPL +QL + + G+ P Sbjct: 33 SIAIGFCVSIPLSIARVSKNRWVRWPVQFYTYLFRGTPLYIQLLICYTGIYSIAAVREQP 92 Query: 83 HIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + F D+ +++ TLN AY +EI +I S+ G+ +A+ A GL + ++I+ Sbjct: 93 MLDAFFRDAMNCTLLAFTLNTCAYTTEIFAGAIRSMAHGEVEAAKAYGLNGWKLYAYVIM 152 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 P + S S+E I +L ST+VA T T+P+I + A+ S T+ + A +YL Sbjct: 153 PSVLRRSLPYYSNEVILMLHSTTVAFTATVPDILKVARDANSATFMTFQSFGIAAVMYLT 212 Query: 202 LT 203 +T Sbjct: 213 VT 214 >gi|300811422|ref|ZP_07091918.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497657|gb|EFK32683.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 213 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 94/177 (53%), Gaps = 2/177 (1%) Query: 28 ACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGI 86 + IS SLIIG A++ + + YV IFR PLLV V + LP + + Sbjct: 23 SLISLFFSLIIGSGFAILETV-PNKFWRGVAKVYVEIFRNIPLLVVTMVFYLVLPTYTPL 81 Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 F A I L++ SA+I+E +RS I S+ GQ + + + G+T Q +R++ILPQ Sbjct: 82 KLTGFQAGTIGLSIYSSAFIAETVRSGIQSVGTGQMEGARSNGMTYWQAMRYVILPQAFR 141 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++ ++++K++S+ + + ++ + S T+Q + Y ++ YL+LT Sbjct: 142 IVIPPLGNQLVNLIKNSSILAFVAGFDLMYQGDIVASNTFQTIPSYVLVSLFYLVLT 198 >gi|253688538|ref|YP_003017728.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755116|gb|ACT13192.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 314 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 112/207 (54%), Gaps = 26/207 (12%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY----------GLPHI 84 S++ G +A+ R+ S ++S + Y+W+FR PL++ L +++ G+P Sbjct: 88 SIVFGTALALARLSPS-YLLSTLSWLYIWLFRSLPLILVLIILYNFSYLYDELALGIPFT 146 Query: 85 GIVF---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +VF D F ++ LTL SAY +EIIR I+ + GQ++AS A+GL + Sbjct: 147 SVVFLRYPTIDLLDQFSVAVLGLTLVQSAYTAEIIRGGILGVDAGQFEASAALGLPGGRR 206 Query: 136 IRHIILPQTITTSAVPLS-SEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIY 192 IILPQ + S +P +E IS+ K TS+ + +PE+F T Q I + T Q PL++ Sbjct: 207 TVRIILPQAL-RSILPTGFNEIISLAKGTSIVYVLALPELFYTVQVIYNRTQQVIPLLMV 265 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQ 219 + YL++T+ +IQ +E V++ Sbjct: 266 ATI--WYLLITTVLSVIQYYVERYVSR 290 >gi|15901311|ref|NP_345915.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|15903358|ref|NP_358908.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6] gi|111658102|ref|ZP_01408801.1| hypothetical protein SpneT_02000710 [Streptococcus pneumoniae TIGR4] gi|116515947|ref|YP_816756.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] gi|148984803|ref|ZP_01818056.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] gi|148990269|ref|ZP_01821480.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] gi|148992655|ref|ZP_01822323.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP9-BS68] gi|148997480|ref|ZP_01825085.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] gi|149002856|ref|ZP_01827782.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS69] gi|149007268|ref|ZP_01830926.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|149011689|ref|ZP_01832885.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP19-BS75] gi|149019406|ref|ZP_01834768.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP23-BS72] gi|168483927|ref|ZP_02708879.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae CDC1873-00] gi|168486158|ref|ZP_02710666.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae CDC1087-00] gi|168489622|ref|ZP_02713821.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae SP195] gi|168492530|ref|ZP_02716673.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae CDC0288-04] gi|168493362|ref|ZP_02717505.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae CDC3059-06] gi|168575918|ref|ZP_02721833.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae MLV-016] gi|169833994|ref|YP_001694877.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae Hungary19A-6] gi|182684418|ref|YP_001836165.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] gi|221232186|ref|YP_002511339.1| ABC transporter permease [Streptococcus pneumoniae ATCC 700669] gi|225854902|ref|YP_002736414.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae JJA] gi|225857087|ref|YP_002738598.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae P1031] gi|225859222|ref|YP_002740732.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae 70585] gi|225860770|ref|YP_002742279.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae Taiwan19F-14] gi|237649578|ref|ZP_04523830.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae CCRI 1974] gi|237821542|ref|ZP_04597387.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae CCRI 1974M2] gi|289168215|ref|YP_003446484.1| ABC transporter membrane-spanning permease-aspartate/glutamate transport [Streptococcus mitis B6] gi|298230956|ref|ZP_06964637.1| ABC transporter membrane-spanning permease-aspartate/glutamate transport [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254980|ref|ZP_06978566.1| ABC transporter membrane-spanning permease-aspartate/glutamate transport [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502585|ref|YP_003724525.1| amino acid ABC superfamily transporter membrane protein [Streptococcus pneumoniae TCH8431/19A] gi|303254998|ref|ZP_07341075.1| ABC transporter permease protein [Streptococcus pneumoniae BS455] gi|303261737|ref|ZP_07347684.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS292] gi|303264410|ref|ZP_07350330.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS397] gi|303266758|ref|ZP_07352640.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS457] gi|303269183|ref|ZP_07354961.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS458] gi|307068111|ref|YP_003877077.1| amino acid ABC transporter permease [Streptococcus pneumoniae AP200] gi|307126969|ref|YP_003879000.1| aspartate/glutamate ABC transporter membrane-spanning permease [Streptococcus pneumoniae 670-6B] gi|307706929|ref|ZP_07643728.1| L-cystine transport system permease protein tcyB [Streptococcus mitis SK321] gi|14972950|gb|AAK75555.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|15458959|gb|AAL00119.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae R6] gi|116076523|gb|ABJ54243.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] gi|147756535|gb|EDK63576.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] gi|147759150|gb|EDK66144.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS69] gi|147761072|gb|EDK68040.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|147764120|gb|EDK71052.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP19-BS75] gi|147922825|gb|EDK73941.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] gi|147924408|gb|EDK75498.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] gi|147928672|gb|EDK79686.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP9-BS68] gi|147931276|gb|EDK82255.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP23-BS72] gi|168996496|gb|ACA37108.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae Hungary19A-6] gi|172042784|gb|EDT50830.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae CDC1873-00] gi|182629752|gb|ACB90700.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] gi|183570798|gb|EDT91326.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae CDC1087-00] gi|183571922|gb|EDT92450.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae SP195] gi|183573271|gb|EDT93799.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae CDC0288-04] gi|183576607|gb|EDT97135.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae CDC3059-06] gi|183578205|gb|EDT98733.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae MLV-016] gi|220674647|emb|CAR69216.1| ABC transporter permease protein [Streptococcus pneumoniae ATCC 700669] gi|225720038|gb|ACO15892.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae 70585] gi|225724222|gb|ACO20075.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae JJA] gi|225726278|gb|ACO22130.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae P1031] gi|225727706|gb|ACO23557.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae Taiwan19F-14] gi|288907782|emb|CBJ22622.1| ABC transporter membrane-spanning permease-aspartate/glutamate transport [Streptococcus mitis B6] gi|298238180|gb|ADI69311.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pneumoniae TCH8431/19A] gi|301794485|emb|CBW36924.1| ABC transporter permease protein [Streptococcus pneumoniae INV104] gi|301800311|emb|CBW32937.1| ABC transporter permease protein [Streptococcus pneumoniae OXC141] gi|301802189|emb|CBW34935.1| ABC transporter permease protein [Streptococcus pneumoniae INV200] gi|302598005|gb|EFL65074.1| ABC transporter permease protein [Streptococcus pneumoniae BS455] gi|302637317|gb|EFL67805.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS292] gi|302641307|gb|EFL71676.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS458] gi|302643747|gb|EFL74012.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS457] gi|302646222|gb|EFL76449.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS397] gi|306409648|gb|ADM85075.1| ABC-type amino acid transport system, permease component [Streptococcus pneumoniae AP200] gi|306484031|gb|ADM90900.1| ABC transporter membrane-spanning permease - aspartate/glutamate transport [Streptococcus pneumoniae 670-6B] gi|307617643|gb|EFN96811.1| L-cystine transport system permease protein tcyB [Streptococcus mitis SK321] gi|332072255|gb|EGI82738.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17570] gi|332073798|gb|EGI84276.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA41301] gi|332074213|gb|EGI84690.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17545] gi|332199505|gb|EGJ13580.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA41317] gi|332200023|gb|EGJ14096.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA47368] gi|332200904|gb|EGJ14975.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA47901] Length = 266 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 109/223 (48%), Gaps = 28/223 (12%) Query: 9 IIDSFP---QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + D P Q L I++T+ A V++L+ A+++I I+ + F+V Sbjct: 30 VFDGIPRIVQQLPTTIMLTIGGALFGLVLALLF----AIVKIN-RVKILYPLQAFFVSFL 84 Query: 66 RGTPLLVQLFVIFYGLP--------HIGIVFDSFVAIIISLTL-----NFSAYISEIIRS 112 +GTP+LVQL + +YG+P G + + + N +AY SE IR+ Sbjct: 85 KGTPILVQLMLTYYGIPLALKALNQQWGTGLNINAIPAAAFAIVAFAFNEAAYASETIRA 144 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I+S+ G+ +A+ ++G+TR Q R +I+P + L + I + K TS+A + + Sbjct: 145 AILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKGTSLAFSAGVV 204 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 E+F AQ + Y+ + +A VY +++ I IES Sbjct: 205 EVFAQAQILGGADYRYFERFISVALVY-------WVVNIGIES 240 >gi|148255316|ref|YP_001239901.1| putative amino acid ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146407489|gb|ABQ35995.1| amino acid ABC transporter membrane protein 2, PAAT family [Bradyrhizobium sp. BTAi1] Length = 506 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 15/215 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQ 73 L+ ++VTL ++ I V S+ IG +A+ R + I LI F ++ + RG PL+ Sbjct: 293 LWGGMLVTLVVSVIGIVASMPIGIALALGR----RSTIPLIRLFSIAFIELVRGVPLITV 348 Query: 74 LFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LF Y LP + D V ++ + L AY++E+IR + +IP+GQ +A+ A+GL Sbjct: 349 LFFATYMLPLFLPGNMRIDGLVRALVGVALFSGAYMAEVIRGGLQAIPRGQAEAASALGL 408 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT--YQP 188 + +T I+LPQ + + + FIS+ K TS+ S + + ++ + + + P Sbjct: 409 SWWKTTSFIVLPQALRHVIPGIVNSFISLFKDTSLVSIVALFDLLGSLKASFADPVWATP 468 Query: 189 LIIYCELAFVYLILTSFCYII---QIKIESSVTQH 220 + AF LI FC+ + + +E + H Sbjct: 469 TTAFTGFAFTGLIYFVFCFGMSRYSLLVERRLNAH 503 >gi|295680984|ref|YP_003609558.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1002] gi|295440879|gb|ADG20047.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 237 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 15/206 (7%) Query: 5 WFNLII-DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W N I D F Y +V+ L + S V+ ++ +A+ R + I + F + Sbjct: 9 WQNYIFTDGFN---YTGLVIRLWLLVASIVLGFVLAVPLAIARASRNRYIHGPVWLF-TY 64 Query: 64 IFRGTPLLVQLFVIFYGL-----PHIGIVFDSFV-----AIIISLTLNFSAYISEIIRSS 113 +FRGTPL VQL +I+ GL H + DSF +++ LN AY +EI + Sbjct: 65 VFRGTPLYVQLLLIYTGLYSLHFVHSYAMLDSFFRNAMNCTLLAFALNECAYATEIFAGA 124 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I G+ +A+ A G+++ + IILP + + S+E I +L +T++A T T+P+ Sbjct: 125 IRETSHGEIEAAQAYGMSKFKLYTRIILPSALRRALPSYSNEVILMLHATTLAFTATVPD 184 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVY 199 I + A+ + S TY Y A +Y Sbjct: 185 ILKVARDVNSATYATFQAYGIAAILY 210 >gi|217977865|ref|YP_002362012.1| polar amino acid ABC transporter, inner membrane subunit [Methylocella silvestris BL2] gi|217503241|gb|ACK50650.1| polar amino acid ABC transporter, inner membrane subunit [Methylocella silvestris BL2] Length = 384 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 56/199 (28%), Positives = 102/199 (51%), Gaps = 6/199 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ I V+L +A + V+SL G +A+ R S +S+ ++ + RG P++ LF+ Sbjct: 171 LWGGIFVSLLVAIVGMVVSLPFGVLLALGRRS-SLPALSIACASFIELVRGVPIITVLFM 229 Query: 77 IFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP + D + +I + L SAY++E++R + +IP GQ++ + A+GL R Sbjct: 230 ANTMLPLFVPENLAPDRLLRPLIGVALFASAYMAEVVRGGLQAIPSGQFEGAEALGLGRW 289 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT--AQRIVSTTYQPLII 191 QT R +ILPQ + + + FI++ K T++ + + I + +T + R+ P I Sbjct: 290 QTQRLVILPQALRAVIPGVVNNFIALFKDTTLVAVVGIFDFLRTVDSARLDPVWAGPTIA 349 Query: 192 YCELAFVYLILTSFCYIIQ 210 AF + FC+ + Sbjct: 350 TTGYAFAAMFYFVFCFAMS 368 >gi|86742203|ref|YP_482603.1| amino acid ABC transporter permease [Frankia sp. CcI3] gi|86569065|gb|ABD12874.1| amino acid ABC transporter membrane protein 1, PAAT family [Frankia sp. CcI3] Length = 189 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 5/146 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV R TPL V F + + LP + IVF F +++L++ +A + E +RS I + G Sbjct: 28 YVQTVRNTPLTVVFFFVVFVLPQLDIVFSYFTFAVVALSIYHAALVCEAVRSGINGVDLG 87 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+GLT QT+R IILPQ PL S +++++TS+A+ + E+ QR Sbjct: 88 QAEAARALGLTFSQTLRMIILPQAFRNVLQPLGSVVSALIRNTSIAAAFGVQELTGMVQR 147 Query: 181 IVSTTYQP-LIIYCELAFV--YLILT 203 + TT P +I L V YLILT Sbjct: 148 L--TTANPDAVIAVLLGGVVAYLILT 171 >gi|209546624|ref|YP_002278542.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537868|gb|ACI57802.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 251 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 104/197 (52%), Gaps = 3/197 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+I +P + TL ++ +S ++ + A+ R+ S ++ + V+ Sbjct: 13 WLLLLIGQYPNGPLGGLANTLILSALSIALAFPVSILFAMARLSKSP-LLRWPVTALVYF 71 Query: 65 FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RG PLL+ + ++ +P + G SFV ++ +L + SA++SE++R+ I+++ GQ D Sbjct: 72 TRGVPLLMLILWSYFLVPLLTGADVPSFVTMLTTLVVYQSAFLSEVVRAGIVALGPGQMD 131 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIV 182 A+ A+G +R+IILPQ + + S F+S +K T++ I +P++ F +Q Sbjct: 132 AARALGHGHIGAMRYIILPQALYNMIPSILSTFVSTIKDTTLGYVINVPDLTFAASQVNN 191 Query: 183 STTYQPLIIYCELAFVY 199 QP ++ LA VY Sbjct: 192 QLLTQPFQVFLILAIVY 208 >gi|86148622|ref|ZP_01066904.1| ABC-type amino acid transport system, permease component [Vibrio sp. MED222] gi|218709392|ref|YP_002417013.1| ABC transporter transmembrane protein [Vibrio splendidus LGP32] gi|85833578|gb|EAQ51754.1| ABC-type amino acid transport system, permease component [Vibrio sp. MED222] gi|218322411|emb|CAV18564.1| ABC transporter: Transmembrane protein [Vibrio splendidus LGP32] Length = 365 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 104/195 (53%), Gaps = 8/195 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + ++VTL IA + V+SL IG +A+ R II + Y+ I+RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVALALGRRS-EMPIIRSMCTVYIEIWRGVPLITVLFMA 213 Query: 78 FYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 LP G+ D + ++ + L +AY++E+IR + +IPKGQ++A+ A+GL+ + Sbjct: 214 SVMLPLFLSEGMETDKLIRALVGVVLFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWK 273 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 IILPQ + + + + FI + K TS+ I + ++ Q + T + Y Sbjct: 274 KTGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQ--AANTDPEWLGYST 331 Query: 195 LAFVY--LILTSFCY 207 ++V+ L+ FC+ Sbjct: 332 ESYVFVALVFWVFCF 346 >gi|213023865|ref|ZP_03338312.1| histidine transport system permease protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 177 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 11/176 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSF----------VAIIISLTLNFSAYISEI 109 Y + RG P LV + +IFYGL + +V DS VA II+L + AY +E Sbjct: 1 YTTLIRGVPDLVLMLLIFYGLQIALNVVTDSLGIDQIDIDPMVAGIITLGFIYGAYFTET 60 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 R + +++PKG +A+ A G T QT R I+ P + + + + + ILK+T++ S + Sbjct: 61 FRGAFMAVPKGHIEAATAFGFTHGQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLL 120 Query: 170 TIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + ++ + Q +T++P +YL+ T+ + + +E + D Sbjct: 121 GLEDVVKATQLAGKSTWEPFYFAVVCGLIYLVFTTVSNGVLLLLERRYSVGVKRAD 176 >gi|78356476|ref|YP_387925.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218881|gb|ABB38230.1| amino acid ABC transporter membrane protein 2, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 230 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 114/210 (54%), Gaps = 9/210 (4%) Query: 5 WFNL---IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 W NL +I S+P+ I +++ ++ + + +G + ++R+ + L + Sbjct: 7 WDNLDYLLIGSYPEGPLGGIALSIVLSLGGILGAFWLGLALGLMRLS-KRWPVRLPAVLF 65 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 + I RGTPLL+ LF ++ P + G +I+ + SAYI+EI+R+ ++++P+G Sbjct: 66 IEIIRGTPLLLLLFWFYFLAPVVLGQTLPEVECALITFVVFTSAYIAEIVRAGVLALPQG 125 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ GLT+ Q +R +ILPQ + ++F+S+ K TS+A I + E+ + A + Sbjct: 126 QMEAARGTGLTKLQAMRFVILPQALRNMIPSFVNQFVSLTKDTSLAYVIGVAELTRAAVQ 185 Query: 181 IVSTTYQ-PLIIYCELAFVYLILTSFCYII 209 + + T P+ IY + +Y ++ CY + Sbjct: 186 VNNRTLSAPMEIYFTILVMYFLI---CYAL 212 >gi|50086449|ref|YP_047959.1| amino acid ABC transporter ATP-binding protein [Acinetobacter sp. ADP1] gi|49532425|emb|CAG70137.1| putative amino acid transport protein (ABC superfamily, ATP_bind and membrane) [Acinetobacter sp. ADP1] Length = 505 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 122/218 (55%), Gaps = 12/218 (5%) Query: 1 MKYEW---FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI 57 M+++W L+++ + + A + ++ + ++I +++GF +A + S ++ + Sbjct: 1 MEFDWTYTLGLLLN---KNFWMATWTVIELSILVWLIGILLGFVLAFAKQS-SFKPLAWM 56 Query: 58 MHFYVWIFRGTPLLVQLFVIFYG---LPHIGIVFDS-FVAIIISLTLNFSAYISEIIRSS 113 Y+W FR PLLV L ++ P +V S F+A +I++TL+ +AYI+EI R Sbjct: 57 SGTYIWFFRSLPLLVLLVFVYNLPQIFPASSVVLASPFLAGLIAMTLSEAAYIAEIHRGG 116 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + SI KGQ +A A+G+ R I++PQ + L++E++SI+K TS+ S I++ E Sbjct: 117 LTSITKGQIEAGKALGMKSLGIQRFIVIPQAFRVALPSLANEYVSIVKLTSLVSVISLTE 176 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVY-LILTSFCYIIQ 210 I QR+ + + L +AF Y LI+T F ++IQ Sbjct: 177 ILLVGQRLYTQNFLVLETMLAVAFYYVLIVTVFGWLIQ 214 >gi|312863033|ref|ZP_07723271.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] gi|322516151|ref|ZP_08069084.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] gi|311100569|gb|EFQ58774.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] gi|322125327|gb|EFX96682.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] Length = 307 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 61/228 (26%), Positives = 113/228 (49%), Gaps = 19/228 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + + D+ P+++ + +TL + + LI+ AV++I I+ I +V Sbjct: 68 WKAVFDAVPKIV-EHLPLTLGLTIAGAFLGLILALVFAVVKIN-RVRILYPIQAVFVSFL 125 Query: 66 RGTPLLVQLFVIFYGLP--------HIGIVFD-----SFVAIIISLTLNFSAYISEIIRS 112 RGTP+LVQL + +YG+P G+ ++ + I + N +AY+SE IR+ Sbjct: 126 RGTPILVQLMLTYYGIPLFLRYLNGEFGLDWNINEIPPAIFAITAFAFNEAAYMSETIRA 185 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I ++ G+ +A+ ++G+T Q R +I+P + L + I + K TS+A + I Sbjct: 186 AIQAVDAGEIEAARSLGMTSAQVYRRVIIPNAAVIATPSLINSLIGLTKGTSLAFSAGIV 245 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E++ AQ + Y+ Y +A VY +++ I+ I SV H Sbjct: 246 EMYAQAQILGGADYRYFERYISVALVYWVIS----ILIENIGRSVENH 289 >gi|83747887|ref|ZP_00944919.1| Hypothetical Protein RRSL_03143 [Ralstonia solanacearum UW551] gi|207739277|ref|YP_002257670.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] gi|83725420|gb|EAP72566.1| Hypothetical Protein RRSL_03143 [Ralstonia solanacearum UW551] gi|206592650|emb|CAQ59556.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] Length = 250 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 106/202 (52%), Gaps = 3/202 (1%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 + W L++ +P I TL ++ + ++ + +A+ R+ + + + Sbjct: 11 RDNWLLLLVGQYPNGPLGGIACTLILSVLGIGLAFPLSVLLALARLSPWRPLHASVTAL- 69 Query: 62 VWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 V++ RG PLL+ + +++ +P IG F ++ +L + Y+SE++R+ I ++PKG Sbjct: 70 VYVVRGVPLLMWILWVYFLVPLLIGSNVSGFTTMVCTLVIYEGVYLSEVVRAGIEALPKG 129 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+G + +R +ILPQ + + ++F+S +K T++ I +PE+ A + Sbjct: 130 QMEAARALGHSYFGAMRLVILPQALYNMLPSMLAQFVSTIKETTLGYVINVPELTFAANQ 189 Query: 181 IVSTTY-QPLIIYCELAFVYLI 201 I + +P I+ LA +Y + Sbjct: 190 INNALLSKPFQIFFMLAVIYFV 211 >gi|269968793|ref|ZP_06182782.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 40B] gi|269826605|gb|EEZ80950.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 40B] Length = 365 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 6/194 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + ++VTL IA + V+SL IG +A+ R II I Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVVLALGR-RSEMPIIRSICTVYIEVWRGVPLITVLFMA 213 Query: 78 FYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 LP G D + +I + + SAY++E++R + +IPKGQ++A+ A+GL+ + Sbjct: 214 SVMLPLFMSEGSETDKLIRALIGVVMFASAYMAEVVRGGLQAIPKGQYEAADALGLSYWK 273 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 IILPQ + + + + FI + K TS+ I + ++ Q +T + L E Sbjct: 274 KTGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPEWLGFATE 332 Query: 195 -LAFVYLILTSFCY 207 FV L+ FC+ Sbjct: 333 SYVFVALVFWVFCF 346 >gi|126733841|ref|ZP_01749588.1| glutamine ABC transporter, permease protein, putative [Roseobacter sp. CCS2] gi|126716707|gb|EBA13571.1| glutamine ABC transporter, permease protein, putative [Roseobacter sp. CCS2] Length = 277 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 114/211 (54%), Gaps = 13/211 (6%) Query: 2 KYEWFN--LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM- 58 + +FN ++ D+FP+LL A + L I S I+G IA+ R S + L + Sbjct: 52 QRSFFNGAVLADTFPKLL-DAFKINLMIFSWSAPAIAILGLLIALARDAKSPALFPLRIF 110 Query: 59 -HFYVWIFRGTPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSI 114 + +FRG P+++ +++I +G+P +G+ ++ ++L L +SAY++EI RS I Sbjct: 111 GATFTDVFRGVPVILTVYLIGFGIPGLGLPRPWNSPYIWGSLALILTYSAYVAEIFRSGI 170 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+ + Q A+ ++GL+ +Q +R ++LPQ I + I++ K S+ S I EI Sbjct: 171 DSVHQSQRSAALSLGLSERQVMRDVVLPQAIRNVVPSQMNMLIALQKDVSLLSFIGPVEI 230 Query: 175 FQTAQ--RIVSTTYQPLIIYCELAFVYLILT 203 F+ A + ++ + P Y A ++LI+T Sbjct: 231 FRQAGVFKSLTANFTP---YVGAAIIFLIVT 258 >gi|182678575|ref|YP_001832721.1| polar amino acid ABC transporter, inner membrane subunit [Beijerinckia indica subsp. indica ATCC 9039] gi|182634458|gb|ACB95232.1| polar amino acid ABC transporter, inner membrane subunit [Beijerinckia indica subsp. indica ATCC 9039] Length = 385 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 54/212 (25%), Positives = 109/212 (51%), Gaps = 9/212 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ I ++L +A + V+SL +G F+A+ R + ++SL ++ RG P++ LF+ Sbjct: 172 LWGGIFLSLVVAGVGIVVSLPLGIFLALGRRS-TLPVVSLASTLFIEFVRGVPMITVLFM 230 Query: 77 IFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 + LP + D + +I + L SAY++E++R + ++PKGQ++ + A+GL Sbjct: 231 ANFMLPLFLPASMSVDRLIRPLIGVALFASAYMAEVVRGGLQAVPKGQFEGAAALGLPPW 290 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT--AQRIVSTTYQPLII 191 +T++ ++LPQ + + + FI + K T++ + + I + +T + R+ P I Sbjct: 291 KTLQLVVLPQALAHVIPGIVNTFIGLFKDTTLVAAVGIFDFLRTVDSARLDPAWAGPTIS 350 Query: 192 YCELAFVYLILTSFCYII---QIKIESSVTQH 220 F L FC+ + I +E + + Sbjct: 351 ASGYLFAALFYFVFCFGMSRYSIGVERRLARG 382 >gi|239821011|ref|YP_002948196.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] gi|239805864|gb|ACS22930.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 252 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 106/201 (52%), Gaps = 3/201 (1%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 ++ W L++ +P IV TL ++ + V++ + +A+ R+ ++ Sbjct: 8 LRDNWLLLLVGQYPSGPLGGIVATLILSVLGIVLAFPLSVLLALARLS-PWRLLRWPATV 66 Query: 61 YVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 V++ RG PLL+ + +++ +P IG F ++ +L + AY+SE++R+ I ++PK Sbjct: 67 LVYVVRGVPLLMVILWVYFLVPILIGRDVSGFTTMLCTLVIYEGAYLSEVVRAGIQALPK 126 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ A+G + T+ +ILPQ + + S+FIS +K T++ I + E+ A Sbjct: 127 GQAEAARALGHSHLGTMWFVILPQALYNMLPSMLSQFISTIKETTLGYVINVQELTFAAN 186 Query: 180 RIVSTTY-QPLIIYCELAFVY 199 +I + +P ++ LA Y Sbjct: 187 QINNQLLTKPFQVFFILAMTY 207 >gi|161521797|ref|YP_001585224.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189352041|ref|YP_001947668.1| polar amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] gi|160345847|gb|ABX18932.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189336063|dbj|BAG45132.1| polar amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 223 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 119/228 (52%), Gaps = 14/228 (6%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM- 58 M Y + F+ + S LL + VT+ +A + + L++GF + + F+ + +L+ Sbjct: 1 MNYHFDFSFLAGSVGALL-DGLKVTVVLAVAANAMGLVLGFVLCL----FAMSRWALVRW 55 Query: 59 --HFYVWIFRGTPLLVQLFVIFYGLPHIGIVF-DSFVAIIISLTLNFSAYISEIIRSSII 115 ++ FR TP L+Q+ FY +P + VF D +++L LN +A+ +E R+ + Sbjct: 56 PAQLFIEFFRCTPALLQIIWFFYCIPMMVDVFIDPITMGVLALGLNLTAFNAEAYRAGVQ 115 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++PK DA+ A+GL Q ++LPQ + + L + I L+ +++ + + + ++ Sbjct: 116 AVPKEHLDAAVALGLRPWQRTIFVVLPQALRNAMPVLLTNGIGSLQQSALVAIVAVADLM 175 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILT----SFCYIIQIKIESSVTQ 219 A+ + + Y+PL Y +A VY L+ ++I+ + +++V + Sbjct: 176 YVAKSLATQAYRPLETYSVVALVYFALSLPIARLVHVIERRQDAAVQR 223 >gi|118587810|ref|ZP_01545220.1| probable amino-acid transmembrane abc transporter protein [Stappia aggregata IAM 12614] gi|118439432|gb|EAV46063.1| probable amino-acid transmembrane abc transporter protein [Stappia aggregata IAM 12614] Length = 241 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 105/199 (52%), Gaps = 8/199 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L A T+ ++ I+F+ +IG + R+ T+ + I Y W+F+ PLL+ LF+ Sbjct: 25 LLEATQYTIYLSLIAFIGGGLIGACVTAARVSPVKTL-ARIFTAYTWLFQSVPLLMLLFL 83 Query: 77 IFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 + G+PH+ I D + A I+LTL SAY++E+ R ++ +IP GQ + A+G+T Q Sbjct: 84 LGLGIPHLFEIQVDPWRAAGIALTLYTSAYLAEVWRGALTAIPSGQHEGGKALGMTFAQI 143 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST---TYQPLIIY 192 + IILPQ + P + I+K TS+A I ++ +R + QP +IY Sbjct: 144 MLLIILPQAFRLAIAPTVGFMVQIIKGTSLAYIIGFHDLMTVGKRWANAPVPGTQPFVIY 203 Query: 193 CELAFVYLILTSFCYIIQI 211 +A +Y S C+ + + Sbjct: 204 PLMAMIYF---SLCFPLSV 219 >gi|229816475|ref|ZP_04446775.1| hypothetical protein COLINT_03528 [Collinsella intestinalis DSM 13280] gi|229807942|gb|EEP43744.1| hypothetical protein COLINT_03528 [Collinsella intestinalis DSM 13280] Length = 286 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 103/191 (53%), Gaps = 9/191 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIR---IFFSDTIISLIMHFYVWIFRGTPLLVQ 73 L A + TL +A + I+L++G + + R I + ++ F FRG P L+ Sbjct: 74 LLAGLRGTLTVALTAGGIALVLGLALMLGRTSGIRVLEAACRVVTDF----FRGVPSLLL 129 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 ++ F +P GI SF + + + L S ++E+ R+ + ++P+GQ +A+ A+G++ Sbjct: 130 IYFFFLVVPQYGIRMSSFWMLALPVALAASGVLAEVFRAGVNAVPRGQTEAALALGMSPF 189 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI-IY 192 + I+LPQ I L S+ + ++K T+VA ++ P++ Q A R++ T Y L+ Y Sbjct: 190 RVKLKIVLPQAIRYVIPSLISQLVVVVKDTTVAYVVSYPDMLQNA-RVLITNYDALVSTY 248 Query: 193 CELAFVYLILT 203 +A +Y++L Sbjct: 249 LVVAVIYILLN 259 >gi|156742156|ref|YP_001432285.1| polar amino acid ABC transporter inner membrane subunit [Roseiflexus castenholzii DSM 13941] gi|156233484|gb|ABU58267.1| polar amino acid ABC transporter, inner membrane subunit [Roseiflexus castenholzii DSM 13941] Length = 217 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 95/171 (55%), Gaps = 2/171 (1%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ + ++ + +++G +AV R++ + +++ Y R P++V +F++F+ + Sbjct: 21 VTISVTAVALTVGVVVGIVMAVARVY-GHPALQIVVSAYSVAVRAVPVIVIIFLLFFVIS 79 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 + F A ++L AY +EI R ++ ++ GQ A+ AIG++R Q I+ ++LP Sbjct: 80 RY-VNLSPFWAGALALGFASGAYQTEIFRGALQAVQPGQMIAARAIGMSRLQAIQSVVLP 138 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 Q + + +E +LK +++ + +PEI + AQ++ + T++P + + Sbjct: 139 QALRLALPAWGNEATLVLKDSTLVFAVGVPEILRRAQQVSARTFEPFLAFG 189 >gi|289646273|ref|ZP_06477616.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 246 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 87/149 (58%), Gaps = 5/149 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V++ RG PLL+ +F ++ +P IG F ++ +L + SAY+ EIIR +I ++P Sbjct: 67 WVYVMRGIPLLMVIFWTYFLVPLLIGHNITGFTTMLCTLVVYQSAYLCEIIRGAIQALPA 126 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++AS A+G+ +T +ILPQ + + L S+FISI+K TS+ I + E+ A Sbjct: 127 GQYEASRALGMGYMRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINVQEVTFAAN 186 Query: 180 RIVSTTY-QPLIIYCELAFVYLILTSFCY 207 +I + +P ++ LA Y +L CY Sbjct: 187 QINNQLLTKPFQVFFILAITYYVL---CY 212 >gi|283954478|ref|ZP_06371998.1| putative polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 414] gi|283794095|gb|EFC32844.1| putative polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 414] Length = 219 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 93/169 (55%), Gaps = 1/169 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L + +TL IA + +IS++ G F+A+ + + D + + Y+ IFR TPLL+ + Sbjct: 11 EFLMQGLFLTLKIALATCIISIVFGTFLAITKNY-GDKLSKFLAACYIDIFRNTPLLLWM 69 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 + LP F I +L S+ ++EIIR + SIPKGQ++A+Y+ G + Sbjct: 70 LAACFVLPVFFGQFPQAFWGTIGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGFGKFF 129 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 T+ +IILPQT L S+ ++ +K T+ + + I E+ ++ I++ Sbjct: 130 TLFYIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAELTYNSKTILA 178 >gi|302521614|ref|ZP_07273956.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. SPB78] gi|302430509|gb|EFL02325.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. SPB78] Length = 213 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 55/222 (24%), Positives = 106/222 (47%), Gaps = 12/222 (5%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M YEW ++ + DSFP LL TL + +++ ++G +A+ + L + Sbjct: 1 MNYEWKWDAVSDSFP-LLLDGFWTTLLATALGSLVAAVLGLLVAMAS--RGPAWVRLPVK 57 Query: 60 FYVWIFRGTPLLVQLFVIF--YGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 R TPLLVQL ++ +G D II L ++++ Y+ E R+ I ++ Sbjct: 58 AVTEFIRSTPLLVQLVGVYTLFG------SVDPLTLGIIVLGVHYATYMGEAYRAGIDAV 111 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKGQW+A+ A+ L+ +T ++LPQ + L + I++ K T + IT+ ++ Sbjct: 112 PKGQWEAARALSLSPGRTWGAVVLPQAVRNVLPALGNYAIAMFKETPYLAVITVGDMVLH 171 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 A+ S + ++ ++L+ + ++ K+E + Sbjct: 172 AREYGSAHFAHAEVFTLAGLIFLVASYPTSLLMRKLEKRLGH 213 >gi|84394263|ref|ZP_00992989.1| ABC-type amino acid transport system, permease component [Vibrio splendidus 12B01] gi|84375102|gb|EAP92023.1| ABC-type amino acid transport system, permease component [Vibrio splendidus 12B01] Length = 365 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 61/194 (31%), Positives = 103/194 (53%), Gaps = 6/194 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + ++VTL IA + V+SL IG +A+ R II + Y+ I+RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVALALGRRS-EMPIIRSMCTVYIEIWRGVPLITVLFMA 213 Query: 78 FYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 LP G+ D + ++ + L +AY++E+IR + +IPKGQ++A+ A+GL+ + Sbjct: 214 SVMLPLFLSEGMETDKLIRALVGVVLFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWK 273 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 IILPQ + + + + FI + K TS+ I + ++ Q +T + L E Sbjct: 274 KTGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPEWLGFSTE 332 Query: 195 -LAFVYLILTSFCY 207 FV L+ FC+ Sbjct: 333 SYVFVALVFWVFCF 346 >gi|296156266|ref|ZP_06839105.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295893772|gb|EFG73551.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 247 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 62/235 (26%), Positives = 118/235 (50%), Gaps = 17/235 (7%) Query: 4 EWFN----LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 EW L++ SFP +T+ ++ +S ++S +G + + + L++ Sbjct: 5 EWLPTLRYLLLGSFPNGPLGGAALTVVLSVVSALLSAAVGL-AGGVALSLTRGGARLLLI 63 Query: 60 FYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 V FR P+L+ +F F+ +P HI + A++ +L+L AY+S + + I S Sbjct: 64 GIVAFFRAIPVLMLIFWTFFLMPILLHIDV--PGLAAVVCALSLIGGAYLSHAVHAGIAS 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + Q A+ ++GLTR Q +R+++LPQ + ++++S++K TS+A + +PE Sbjct: 122 VGAAQQQAALSLGLTRWQALRYVVLPQAVRIMMPSFVNQWVSLVKDTSLAYIVGVPEFTF 181 Query: 177 TAQRIVSTTY-QPLIIYCELAFVYLILTS----FCYIIQIKIESSVTQHTYSVDK 226 A ++ S P I+ + VYL+L S F Y + ++ S T+ T D+ Sbjct: 182 LANQVNSRLMIYPAQIFVFVGIVYLLLCSALQWFAYRVLLRAPS--TRATQPQDE 234 >gi|284033080|ref|YP_003383011.1| polar amino acid ABC transporter inner membrane subunit [Kribbella flavida DSM 17836] gi|283812373|gb|ADB34212.1| polar amino acid ABC transporter, inner membrane subunit [Kribbella flavida DSM 17836] Length = 273 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 19/204 (9%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 +F L +A+V TL +FVI LI G +A++R+ S I Y+ FRG P + Sbjct: 59 AFRDGLLSALVKTLEYTAGAFVIGLIGGTLLALMRLS-SVGPYRWIATAYIEFFRGLPAI 117 Query: 72 VQLFVIFYGLP----HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 V +F+ F LP + I FD + + ++L + +AY++E+IR+ I ++PKGQ +A+ + Sbjct: 118 V-VFIAFSLLPLAFEGMRIPFDPYGVVWLALGIVAAAYMAEVIRAGIQAVPKGQVEAARS 176 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS----VASTITIPEIFQTAQRIVS 183 +G+ R I+LPQ PL+++ I ++K +S + ++ T E+ + + + Sbjct: 177 LGMPPGLATRKIVLPQAFRIVLPPLTNDLILLVKDSSLVFIIGTSATAYELTGFGRELAN 236 Query: 184 TTYQPLIIYCELAFVYLILTSFCY 207 T Y L L+ FCY Sbjct: 237 T-------YANL--TPLVTAGFCY 251 >gi|254489632|ref|ZP_05102834.1| nopaline ABC transporter, permease protein [Roseobacter sp. GAI101] gi|214041802|gb|EEB82443.1| nopaline ABC transporter, permease protein [Roseobacter sp. GAI101] Length = 221 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 56/193 (29%), Positives = 105/193 (54%), Gaps = 8/193 (4%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 A + +TL ++ SF+I++++ +AV I ++ + + YV I RG P L+ +F++F Sbjct: 11 AGLKLTLLVSLGSFLIAMLVAI-LAVPLIMSGPKLVRMFLGGYVQIVRGVPELLVIFMVF 69 Query: 79 YGLPHI-----GIVF--DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 YG + G F D+ A I +L AY+ EI+R+++ISIP GQ +A +GL Sbjct: 70 YGGTVVLSTISGSYFEVDALSAGIAALAAVAFAYLLEILRAALISIPAGQREAGQVLGLK 129 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 R Q II PQ + + + ++++ LK +++ S + + E+ + + T +P++ Sbjct: 130 RHQVFSRIIFPQMLMRALPGIGNQWLISLKESALVSVVGLEELMRHSVIAAGATREPMVF 189 Query: 192 YCELAFVYLILTS 204 Y A +Y+ +T Sbjct: 190 YLLAALIYVAITG 202 >gi|260768538|ref|ZP_05877472.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP 102972] gi|260616568|gb|EEX41753.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP 102972] gi|315180250|gb|ADT87164.1| general L-amino acid transport system permease protein AapM [Vibrio furnissii NCTC 11218] Length = 365 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 105/195 (53%), Gaps = 8/195 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFV 76 + ++VTL IA + V+SL IG +A+ R SD +I + Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVALALGRR--SDMPVIRSLCTVYIEVWRGVPLITVLFM 212 Query: 77 IFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G D + +I + + +AY++E+IR + +IPKGQ++A+ A+GL+ Sbjct: 213 ASVMLPLFLSEGSETDKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYW 272 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + + IILPQ + + + + FI + K TS+ I + ++ Q +T + L Sbjct: 273 KKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQ-AANTDPEWLGFAT 331 Query: 194 E-LAFVYLILTSFCY 207 E FV L+ FC+ Sbjct: 332 ESYVFVALVFWVFCF 346 >gi|323466465|gb|ADX70152.1| Amino acid ABC transporter, permease protein [Lactobacillus helveticus H10] Length = 230 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 98/178 (55%), Gaps = 3/178 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L+ A + ++ IA IS +I L IG ++R + II ++ Y+ FR P Sbjct: 19 SNFARLM-AGLWTSIWIAAISLIIGLAIGTIFGILRTL-PNKIIRFVLRIYLEFFRIVPT 76 Query: 71 LVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +V L++++Y LP + + + +++ +L +A S+I+R +I S+PK Q ++ A+G Sbjct: 77 IVLLYLVYYILPRTFHVNWPATWMAVLAFSLWVAAEFSDIVRGAIESVPKSQRESGLALG 136 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 L++ Q R+++LPQ + + ++K+TS+ I+I E+ Q+I+ Q Sbjct: 137 LSKIQLFRYVLLPQAVKLELPATINLATRVIKTTSLLLVISIMEVINVGQQIIEANNQ 194 >gi|304437586|ref|ZP_07397541.1| amino-acid ABC superfamily ATP binding cassette transporter permease protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369399|gb|EFM23069.1| amino-acid ABC superfamily ATP binding cassette transporter permease protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 232 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 109/210 (51%), Gaps = 18/210 (8%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L++ VTL + +S V++ F AV+R+ + I YV RGTPL++Q+ Sbjct: 14 LIWQGAGVTLSLTALSLVLAAPPAFCFAVLRVR-GHRVGGTIARLYVSFVRGTPLVLQIL 72 Query: 76 VIFYG--------LPHIGIVFDSFVAI------IISLTLNFSAYISEIIRSSIISIPKGQ 121 +++ + G F+ F A+ + TLN A ++E RS++++IPKGQ Sbjct: 73 LLYSLLPSLLNLLVKAAGSSFNVFEAVDPFWYAVFIFTLNTIALLTEAFRSALLAIPKGQ 132 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A GL+ +T H+ILPQ + + +++ ++++K TS+A +T+ +I + Sbjct: 133 LEAGAVCGLSEAETYLHVILPQALVVALPSIANITVNLIKGTSLAFLMTVKDIMAVGKVA 192 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 S Y + Y ++ VYLIL C I+Q+ Sbjct: 193 ASYGYNYIEAYLDVFIVYLIL---CTIVQL 219 >gi|206578455|ref|YP_002239814.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|206567513|gb|ACI09289.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] Length = 221 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 56/179 (31%), Positives = 96/179 (53%), Gaps = 7/179 (3%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 DSF L+A + + + A + +I + + +F + +I+ I+ +V + R P Sbjct: 12 DSFIAGLFATLELFITAALAALIIGIALCYFSE-----YQKKVINRIIIGFVSLMRAIPF 66 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L+ ++++YGLP +GI +S+ A +++L + AY EI+RS G +A+ A G Sbjct: 67 LILAYLLYYGLPQLGISMESWTAGLLALIIYHGAYFFEILRSQRRVFSGGYIEAAIAQGF 126 Query: 131 TRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 +R R IILP I +SA+PL ++ I LK T+ S IT+ EI A + +T + P Sbjct: 127 SRYAIFRRIILP-NIISSALPLIGNQLIICLKDTAFLSIITVQEITAAANSVQATYFIP 184 >gi|126442978|ref|YP_001062437.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia pseudomallei 668] gi|126222469|gb|ABN85974.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 668] Length = 371 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/220 (23%), Positives = 107/220 (48%), Gaps = 12/220 (5%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 ++ F LL+A + T+ +A +S SL++G A ++ S+ ++ + FY + R Sbjct: 142 QMLFQGFGPLLWAGTIETVKLAVLSLAASLVLGLAGAAAKLS-SNRALASVGTFYTTLIR 200 Query: 67 GTPLLVQLFVIFYG-----------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 P LV + ++FYG L I D FVA I++L + AY +E R + + Sbjct: 201 AVPDLVLMLLLFYGIQILLNDVTDMLGAEQIDIDPFVAGIVTLGFIYGAYFTETFRGAFL 260 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P+GQ +A +A G+ + I+ Q + + + + + ++K+T++ S I + ++ Sbjct: 261 AVPRGQLEAGFAYGMGAWRVFARIMFAQMMRFALPGIGNNWQVLVKATALVSIIGLADVV 320 Query: 176 QTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 + AQ +T +YL +T+ ++ + +E Sbjct: 321 KAAQDAGKSTLNFFFFTLAAGAIYLAITTLSNLVLMYLEK 360 >gi|324991488|gb|EGC23421.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK353] Length = 219 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 108/196 (55%), Gaps = 15/196 (7%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I+ IS V+S I G +AV+R + ++ LI Y+ R P L+ +F IF Sbjct: 22 LTLQISFISIVLSTIFGTILAVMR-NGKNKLLKLIASIYIEFVRNVPNLLWIFTIF---- 76 Query: 83 HIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 +VF S A IIS T+ SA ++EIIR + +I GQ +A + G T+ Q +R+II Sbjct: 77 ---LVFQIKSTPAGIISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRYII 133 Query: 141 LPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 LPQ I + S+F++++K TS+ S I + E+F +AQ ++ ++ ++ +Y Sbjct: 134 LPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFA----LY 189 Query: 200 LILTSFCYIIQIKIES 215 L++ ++I I S Sbjct: 190 LLVAVIYFLINFAISS 205 >gi|37524241|ref|NP_927585.1| hypothetical protein plu0221 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36783664|emb|CAE12516.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 247 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 120/229 (52%), Gaps = 14/229 (6%) Query: 4 EWFNLIIDSFPQ--LLYAAI--VVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 W L++ +FP L AA+ V++L IS V+ + G +A+++ F+ + +++ ++ Sbjct: 9 NWRYLLLGTFPDGPLEGAALTLVISLIAGTISIVLGTVAGIALAMLKGFWVN-LLAAVLG 67 Query: 60 FYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 F FR P+++ +F ++ LP +G+ ++ +L L SAY++ +++ II+I Sbjct: 68 F----FRAIPVIMLIFWTYFLLPVMLGMEIPEITTVVCALALITSAYLAHGVKAGIIAIG 123 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQT 177 GQW A ++G R Q + +I+LPQ + +++I+++K TS+A + + E+ F Sbjct: 124 AGQWQAGLSLGFNRWQVLWYIVLPQALRMMVPSFINQWIALIKDTSLAYIVGVAELSFLA 183 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 Q + P ++ +A +Y ++ C +++ V + T K Sbjct: 184 TQVNNRSMVYPTEVFLFVALIYFVM---CLALELTANYLVRRFTLQRRK 229 >gi|107022252|ref|YP_620579.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116689197|ref|YP_834820.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|105892441|gb|ABF75606.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia cenocepacia AU 1054] gi|116647286|gb|ABK07927.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia cenocepacia HI2424] Length = 229 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 107/217 (49%), Gaps = 16/217 (7%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F +L+A V T+ ++ +S ++ +G AV ++ + ++ I Y + R P L Sbjct: 5 GFGPVLWAGTVQTIELSVLSLATAVALGLIGAVAKLS-HNRVLRAIATGYTTLIRSVPDL 63 Query: 72 VQLFVIFY-------------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 V + ++FY G I I D FVA +++L + AY +E R + +S+P Sbjct: 64 VLMLLLFYSIQIWLNQFTDLVGWNQIDI--DPFVAGVLTLGFIYGAYFTETFRGAFLSVP 121 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + A Sbjct: 122 RGQLEAGSAYGMSGARVFVRIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAA 181 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q +T+ A +YL +T+ ++ I++E Sbjct: 182 QDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLEK 218 >gi|227877755|ref|ZP_03995789.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256850084|ref|ZP_05555514.1| ABC-type amino acid transport system [Lactobacillus crispatus MV-1A-US] gi|227862658|gb|EEJ70143.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256713056|gb|EEU28047.1| ABC-type amino acid transport system [Lactobacillus crispatus MV-1A-US] Length = 225 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 45/140 (32%), Positives = 73/140 (52%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 +F ++S I YV + R TPLL+QLF ++Y P IG+ + V II L AY++ Sbjct: 49 YFKLPVLSQISTAYVELARNTPLLIQLFFLYYAFPVIGLKMSAEVCGIIGLIFLGGAYMA 108 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E + Q + A+G+ Q R+++ PQ + S L++ I ++K TS+ S Sbjct: 109 EGFTGGFNGVNPSQISSGKALGMNNFQLARYVVFPQGFSLSMPALTANIIFLIKETSIFS 168 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I IPE+ TA ++ Y+ Sbjct: 169 VIAIPELTNTALDLIGMYYR 188 >gi|146278101|ref|YP_001168260.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17025] gi|145556342|gb|ABP70955.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17025] Length = 226 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 10/171 (5%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF----RGT 68 P +L A + T+ +A + L +G +A +R + + +F++ F R Sbjct: 21 LPDML-AGVWTTIWLAAAVIALGLSLGLVLACLRAYGWR-----LANFFIICFADMGRAL 74 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P LV + +I++GLP +G+ + +I+ L +A+ EI + + S+PKGQW+A A Sbjct: 75 PPLVLILIIYFGLPGLGLRVPGPLVLILVLGTVLAAFAEEIFWAGLTSVPKGQWEAGRAT 134 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GL QT+ I LPQ + PL + ++I K T++ S I + EI A Sbjct: 135 GLGFTQTLIQIALPQAARLALPPLVNRVLAISKMTALGSVIGVSEILSVAS 185 >gi|323498375|ref|ZP_08103375.1| hypothetical protein VISI1226_13938 [Vibrio sinaloensis DSM 21326] gi|323316617|gb|EGA69628.1| hypothetical protein VISI1226_13938 [Vibrio sinaloensis DSM 21326] Length = 365 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 103/194 (53%), Gaps = 6/194 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + ++VTL IA + V+SL IG +A+ R II I Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVALALGR-RSEMPIIRSICTVYIEVWRGVPLITVLFMA 213 Query: 78 FYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 LP G D + +I + + +AY++E++R + +IPKGQ++A+ A+GL+ + Sbjct: 214 SVMLPLFLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWK 273 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + IILPQ + + + + FI + K TS+ I + ++ Q +T + L E Sbjct: 274 KMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPEWLGFATE 332 Query: 195 -LAFVYLILTSFCY 207 FV L+ FC+ Sbjct: 333 SYVFVALVFWVFCF 346 >gi|262370797|ref|ZP_06064121.1| histidine transport system permease hisQ [Acinetobacter johnsonii SH046] gi|262314159|gb|EEY95202.1| histidine transport system permease hisQ [Acinetobacter johnsonii SH046] Length = 229 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 58/222 (26%), Positives = 113/222 (50%), Gaps = 20/222 (9%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH---FYVWI 64 + + + +L + +T+ +A +S V+S+IIG F A ++ + I ++ H Y + Sbjct: 1 MFLSGYGPVLLSGTWMTIQLALLSLVLSIIIGLFGASAKL----SRIQILRHVATLYTTL 56 Query: 65 FRGTPLLVQLFVIFYGLPHIG------------IVFDSFVAIIISLTLNFSAYISEIIRS 112 R P LV + ++FY L +G I + FVA +I+L + AY +E R Sbjct: 57 IRSVPDLVIMLLLFYSL-QLGLNSITESIHMEQIDINPFVAGVITLAFIYGAYFTETFRG 115 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + ++PKGQ +A+YA G+T Q R ++ PQ + + + + + ++K+T++ S I + Sbjct: 116 AFQAVPKGQLEAAYAYGMTPFQVFRRVLFPQMMRFALPGIGNNWQVLIKATALVSLIGLT 175 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 +I + Q ++ Q A +YL +T+ +I + +E Sbjct: 176 DIVKITQDAGRSSMQVFYFSIVAAVIYLAITTLSNLILMWLE 217 >gi|167839587|ref|ZP_02466271.1| histidine transport system permease protein [Burkholderia thailandensis MSMB43] Length = 237 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 94/183 (51%), Gaps = 13/183 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD 89 V+S+ +GF +AV I +S + Y ++FRGTPL VQL + + G+ + +V D Sbjct: 31 VVSIGLGFGLAVPLAIARASRSRAVSGPVWLYTYVFRGTPLYVQLLLCYTGIYSLSVVHD 90 Query: 90 ----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + +++ TLN AY +EI +I S G+ +A A G++R + + Sbjct: 91 HAWLDGFFRSAMNCTLLAFTLNECAYATEIFAGAIKSTSPGEIEAGLAYGMSRFKLYTRV 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 ILP + + S+E I +L +T++A T T+P+I + + + S TY Y A +Y Sbjct: 151 ILPSALRRALPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYASFQAYGIAAALY 210 Query: 200 LIL 202 ++ Sbjct: 211 AVV 213 >gi|295394800|ref|ZP_06805015.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Brevibacterium mcbrellneri ATCC 49030] gi|294972396|gb|EFG48256.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Brevibacterium mcbrellneri ATCC 49030] Length = 276 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 55/221 (24%), Positives = 114/221 (51%), Gaps = 6/221 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W + + L+ ++ TL +A ++ V++LI+G A++R+ S IS+ + Sbjct: 52 KWEPFAYATIQKALFKGLLATLKVAVVASVLALILGVVFALLRLS-SKKWISVPATLVLE 110 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRG P+L+ +F + G SF ++I LTL I+E++R+ I+++P+GQ + Sbjct: 111 FFRGLPVLLLIFATYL---LFGKTIGSFWPVVIGLTLYNGMVIAEVVRAGILAVPRGQRE 167 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ +IGL+ QT+ +++PQ L ++ + +LK +++ +T ++ I+ Sbjct: 168 AAQSIGLSDSQTMSLVLMPQAFRAMMPTLIAQIVVLLKDSALGYMVTYQDLLHQVN-IIG 226 Query: 184 TTYQPLI-IYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 Y L+ + A +Y+ + I +ES + + T + Sbjct: 227 RQYGNLLPTFIVGAVIYIAINLIVAGIARWLESRMQRKTAA 267 >gi|284048143|ref|YP_003398482.1| polar amino acid ABC transporter, inner membrane subunit [Acidaminococcus fermentans DSM 20731] gi|283952364|gb|ADB47167.1| polar amino acid ABC transporter, inner membrane subunit [Acidaminococcus fermentans DSM 20731] Length = 231 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 94/180 (52%), Gaps = 6/180 (3%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 VT+ A +I+ ++G + ++ + S + I YV + TPL++QL +++Y L Sbjct: 26 VTVESAIGGILIATVLGILLGLMGVS-SKRLPHAINRIYVEAIQNTPLILQLCLLYYALS 84 Query: 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 G A I+SL L AY++E+IR+ I ++P+GQ++A+ A G Q + +IILP Sbjct: 85 FSGHKIGILAAGIVSLGLYHGAYMAEVIRAGIEAVPRGQFEAADAQGFNYTQKMAYIILP 144 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV-----STTYQPLIIYCELAF 197 QT+ P ++ +++K+T+V I ++ + V +Y P I C + F Sbjct: 145 QTVKIILPPTVNQIGNLIKNTAVLYIIGGADLISSTYNFVTGATTGGSYAPAYIVCGVLF 204 >gi|262047372|ref|ZP_06020329.1| ABC amino acid transporter [Lactobacillus crispatus MV-3A-US] gi|260572346|gb|EEX28909.1| ABC amino acid transporter [Lactobacillus crispatus MV-3A-US] Length = 219 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 73/140 (52%) Query: 48 FFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYIS 107 +F ++S I YV + R TPLL+QLF ++Y P IG+ + V II L AY++ Sbjct: 43 YFKLPVLSQISTAYVELARNTPLLIQLFFLYYAFPVIGLKMSAEVCGIIGLIFLGGAYMA 102 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 E + Q + A+G+ Q R++I PQ + S L++ I ++K TS+ S Sbjct: 103 EGFTGGFNGVSPSQISSGKALGMNNFQLARYVIFPQGFSLSLPALTANIIFLIKETSIFS 162 Query: 168 TITIPEIFQTAQRIVSTTYQ 187 I IPE+ TA ++ Y+ Sbjct: 163 VIAIPELTNTALDLIGMYYR 182 >gi|332637802|ref|ZP_08416665.1| ABC-type amino acid transport system, permease component [Weissella cibaria KACC 11862] Length = 214 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 99/180 (55%), Gaps = 2/180 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + ++ + SLI+G A++ + + ++I Y+ + R PLLV + + FY + Sbjct: 19 TIASSVLALIGSLILGTVFALMEVV-PNKAANIIGRIYIEVLRNIPLLV-ITMFFYVVIA 76 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 + F A + LTL SA+I+E +R+ I ++P GQ + + + GL+ Q +R+++LPQ Sbjct: 77 NVVKISGFAAGTLGLTLYTSAFIAETVRAGINAVPNGQLEGALSNGLSWWQGMRYVVLPQ 136 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL ++FI+++K++SV + + ++ A I T+ + +A YLILT Sbjct: 137 AFKLVIPPLGNQFINLIKNSSVLAFVAGMDLMYQANMISQETFDTFGPFIIVAIFYLILT 196 >gi|171911209|ref|ZP_02926679.1| amino acid ABC transporter, permease protein, putative [Verrucomicrobium spinosum DSM 4136] Length = 254 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 104/205 (50%), Gaps = 7/205 (3%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI---ISLIM 58 KY W + + L+ T+ ++ ++ ++S+ +G + +F + + L Sbjct: 36 KYNWHWESLWKWRWLILRGWGATVVVSALALMVSVPLGLLL----MFGQRSRWIPVRLAC 91 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 V + RGTPLLV L + +YG+ + + ++ + L L S+Y+SEI R + SI Sbjct: 92 RGCVELVRGTPLLVLLLIGYYGVANALGIAKPWLPGVCLLALFHSSYLSEIFRGAWESIG 151 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 Q +A+ A+G ++QT R +I PQ + + + +S++K +S+ S I + E+ Q Sbjct: 152 ASQLEAARAVGFNQQQTWRFVIFPQAFRRALPGTAGQMVSLIKDSSLLSVIGVEELTQMV 211 Query: 179 QRIVSTTYQPLIIYCELAFVYLILT 203 + + Y L + LA +Y++LT Sbjct: 212 RAANAQAYTALEGFIPLAVLYILLT 236 >gi|330831198|ref|YP_004394150.1| ABC-type arginine transporter, permease [Aeromonas veronii B565] gi|328806334|gb|AEB51533.1| ABC-type arginine transporter, permease protein [Aeromonas veronii B565] Length = 220 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 20/163 (12%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYG---------LPHIGIVFDSFVAIIISLTLNFSAYIS 107 ++ +V +F GTPLL+Q+F+I+YG P ++ + +++L LN +AY + Sbjct: 47 LVQLWVLLFTGTPLLIQIFLIYYGPGQFEWLKASPLWPLLKQPWFCAVLALGLNTAAYST 106 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQT----IRHIILPQTITTSAVPL-SSEFISILKS 162 + + ++ +IP G+ +A A+G +QT +RH VP S+E I +LK Sbjct: 107 RLFKGALDAIPAGEVEACRALGFNGRQTLWMKVRHA------ARHLVPAYSNEVILVLKG 160 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSF 205 +S+ASTITI +I AQ + + TY L ++ +YL + Sbjct: 161 SSLASTITIMDIMGLAQGLNAQTYDTLAVFGVAGGLYLAMNGL 203 >gi|317049497|ref|YP_004117145.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316951114|gb|ADU70589.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 235 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 93/183 (50%), Gaps = 14/183 (7%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGTPL 70 P+LL A LP+ +++I+GF +A+I F +IS + YV R P+ Sbjct: 8 PELLSA-----LPLTLAIMFVAMIVGFCLALITTTFRVRRIPLISQLADLYVSYARSVPV 62 Query: 71 LVQLFVIFYGLP------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 ++QLFV FYGLP +G + VA ++ L+L Y+SE++R + +++ +GQ DA Sbjct: 63 VLQLFVAFYGLPLVLESFGVGDFMSATVASMVGLSLYHGGYLSEVMRPAFLAVERGQHDA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G + + + I+ PQ + + I ++ + ++ I ++ TA I+ Sbjct: 123 ADSMGYSFRHKMLRIVGPQALHIGLPGYGNAIIYLIHNVALVMYIGAADVMATAHLIMER 182 Query: 185 TYQ 187 Y Sbjct: 183 DYN 185 >gi|255617479|ref|XP_002539845.1| Nopaline transport system permease protein nocM, putative [Ricinus communis] gi|223501793|gb|EEF22538.1| Nopaline transport system permease protein nocM, putative [Ricinus communis] Length = 217 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 102/189 (53%), Gaps = 9/189 (4%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIR----IFFSDTIISLIMHFYVWIFRGTPLLVQL 74 AA+ T+ + +SF++ I+ + R + +SLI+ + R P ++ L Sbjct: 14 AALPWTIALTVVSFILGAILAVPLCCARTSTNAILRNGALSLIL-----VCRSIPPILWL 68 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 F+IF+G+ F + ++ L + +A + EI R ++ ++P GQ++A++A+GL + Sbjct: 69 FLIFFGVGSELGSLSPFTSAVVGLGIITAANLCEIYRGAMKAVPVGQYEAAHALGLPTVR 128 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 +++PQ S L++ I +LK T+VASTI +P++ +A R+ T++ + +Y Sbjct: 129 RYLDVLVPQIFRVSLPALATYAIGLLKDTAVASTIGVPDLALSANRVAQETFKGIEVYAV 188 Query: 195 LAFVYLILT 203 VY +++ Sbjct: 189 FGLVYFLIS 197 >gi|213052443|ref|ZP_03345321.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 187 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 97/177 (54%), Gaps = 13/177 (7%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-----GIVFDS--------FVAIIISLTL 100 +S + YV +FR PL+VQ F + +P + G+ F + F++ +I L L Sbjct: 2 LSGLGTLYVELFRNVPLIVQFFTWYLVVPELLPEDLGMWFKAELDPNIQFFLSSMICLGL 61 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 +A + E +R++I S+P+GQ +A+ A+GLT Q R+++LP P++SE ++++ Sbjct: 62 FTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLV 121 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSV 217 K++++ASTI + ++ A +++ + + + Y+++ + ++ +E V Sbjct: 122 KNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVMSLVERKV 178 >gi|323492612|ref|ZP_08097756.1| hypothetical protein VIBR0546_00040 [Vibrio brasiliensis LMG 20546] gi|323312987|gb|EGA66107.1| hypothetical protein VIBR0546_00040 [Vibrio brasiliensis LMG 20546] Length = 365 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 103/194 (53%), Gaps = 6/194 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + ++VTL IA + V+SL IG +A+ R II I Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVALALGRRS-EMPIIRSICTVYIEVWRGVPLITVLFMA 213 Query: 78 FYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 LP G D + +I + + +AY++E++R + +IPKGQ++A+ A+GL+ + Sbjct: 214 SVMLPLFLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWK 273 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + IILPQ + + + + FI + K TS+ I + ++ Q +T + L E Sbjct: 274 KMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPEWLGFATE 332 Query: 195 -LAFVYLILTSFCY 207 FV L+ FC+ Sbjct: 333 SYVFVALVFWVFCF 346 >gi|270293189|ref|ZP_06199400.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] gi|270279168|gb|EFA25014.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] Length = 219 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 11/192 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +TL I+ I+ V+S +IG +AV+R + ++ +I Y+ R P L+ +F Sbjct: 16 IFKGFGLTLYISLIAIVLSTLIGTVLAVMR-NGKNPVLRIISSIYIEFVRNVPNLLWIFT 74 Query: 77 IFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF +VF S A I + TL SA ++EIIR + ++ KGQ++A + G T Q Sbjct: 75 IF-------LVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSVQ 127 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYC 193 + HIILPQ I + S+F++++K TS+ S I + E+F +Q ++ ++P ++ Sbjct: 128 ILYHIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFEPEQVFS 187 Query: 194 ELAFVYLILTSF 205 + LI SF Sbjct: 188 LYILIALIYFSF 199 >gi|109947014|ref|YP_664242.1| polar amino acid transport system permease protein [Helicobacter acinonychis str. Sheeba] gi|109714235|emb|CAJ99243.1| polar amino acid transport system permease protein [Helicobacter acinonychis str. Sheeba] Length = 210 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 96/176 (54%), Gaps = 4/176 (2%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 S P L + +TL ++ ++SLI+GF AVI ++F IS I++ Y I R TPLL Sbjct: 4 SIPAFL-KGLELTLYVSFFGILLSLIVGFLCAVI-LYFKMRFISPIVYIYGEIARNTPLL 61 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +QLF ++YGL IG+ + I++L Y+S+ S+ Q +++ ++G + Sbjct: 62 IQLFFLYYGLNAIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASIQRESALSLGFS 119 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 + + +I+LPQ+++ S + + I +LK TSV I + +I A+ + Y+ Sbjct: 120 PLKLLYYIVLPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKDFIGIYYK 175 >gi|317404417|gb|EFV84834.1| amino acid ABC transporter permease [Achromobacter xylosoxidans C54] Length = 396 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 63/98 (64%) Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 F A++ L + SA+I+E++RS I ++ GQW+A+ A+GL RKQ +R ++LPQ + Sbjct: 264 EFAALLAGLVIYTSAFIAEVVRSGIQAVNNGQWEAAGALGLRRKQVLRLVVLPQALRVII 323 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 P++S+F+++ K++S+A I P+I ++ T Q Sbjct: 324 PPMTSQFLNLTKNSSLAVAIGYPDIVSVVNTTLNQTGQ 361 Score = 39.3 bits (90), Expect = 0.37, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D++ + ++ ++ TL +A + V++ I+G I V R+ + +++ I YV + R PL Sbjct: 83 DTYGRAIWVGLLNTLRVAVLGIVLATILGTLIGVGRLS-KNWLVAKITSVYVEVMRNVPL 141 Query: 71 LVQLF 75 L+QLF Sbjct: 142 LLQLF 146 >gi|289624941|ref|ZP_06457895.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650482|ref|ZP_06481825.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330867231|gb|EGH01940.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 248 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 87/156 (55%), Gaps = 15/156 (9%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI------------- 84 +G + V+R S ++S I YV IFR PLLVQLF+ ++ +P + Sbjct: 46 LGSVLGVMRTVPSR-LVSGIATVYVEIFRNVPLLVQLFIWYFLVPDLLPENLQEWYKQDL 104 Query: 85 GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQT 144 +F+++++ L L +A + E +R+ I ++PKGQ A+ A+G Q +++LPQ Sbjct: 105 NPTTSAFLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQA 164 Query: 145 ITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 165 YRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|316934240|ref|YP_004109222.1| polar amino acid ABC transporter inner membrane subunit [Rhodopseudomonas palustris DX-1] gi|315601954|gb|ADU44489.1| polar amino acid ABC transporter, inner membrane subunit [Rhodopseudomonas palustris DX-1] Length = 501 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 15/215 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQ 73 ++ ++VTL ++ V S+ +G +A+ R + I LI F ++ +RG PL+ Sbjct: 288 MWGGLLVTLVVSVTGIVASMPVGIALALGR----RSTIPLIRIFSVAFIEFWRGVPLITV 343 Query: 74 LFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 +F Y LP D+ V ++I + L AY +E+IR + +IP+GQ +A+ A+GL Sbjct: 344 MFFATYMLPLFLPGNFTIDNLVRVLIGIALFAGAYNAEVIRGGLNAIPRGQAEAASALGL 403 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQRIVSTTYQ-P 188 + +T I+LPQ + L + FI++ K TS+ S + + ++ Q T+ P Sbjct: 404 SYWKTTGLIVLPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLGQLRAAFADPTWSTP 463 Query: 189 LIIYCELAFVYLILTSFCYII---QIKIESSVTQH 220 ++ AF LI FC+ + + +E + H Sbjct: 464 TTLFTGFAFTGLIYFVFCFGMSRYSLSVEHRLNAH 498 >gi|171320702|ref|ZP_02909716.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171094062|gb|EDT39158.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 261 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 7/131 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLP------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 YV +FR PLLV ++ Y P H + F + + + L L SA +EI R +I Sbjct: 93 YVQLFRNAPLLVLIYFSTYVFPFEIRFGHAALPFPDWFKVTLGLALPASANFAEIFRGAI 152 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 SIP QWDA+ ++ +R Q R IILPQ I+ P + + SI +T++AS + + ++ Sbjct: 153 QSIPHAQWDAARSLAFSRVQVFRWIILPQCISRMLPPWMNLYASIAMATALASLVGVHDL 212 Query: 175 FQTAQRIVSTT 185 TAQ + S T Sbjct: 213 LDTAQ-VASNT 222 >gi|57242095|ref|ZP_00370035.1| amino acid ABC transporter, permease protein [Campylobacter upsaliensis RM3195] gi|315638190|ref|ZP_07893372.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter upsaliensis JV21] gi|57017287|gb|EAL54068.1| amino acid ABC transporter, permease protein [Campylobacter upsaliensis RM3195] gi|315481726|gb|EFU72348.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter upsaliensis JV21] Length = 219 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 91/170 (53%), Gaps = 1/170 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 L + +TL IA + VIS++ G F+A+ + + D + Y+ IFR TPLL+ + Sbjct: 11 NFLMQGLALTLKIALATCVISILFGTFLAITKNY-GDRFSRFLASAYIDIFRNTPLLLWM 69 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 + LP F I +L S+ ++EIIR + SIPKGQ++A+Y+ G + Sbjct: 70 LAACFVLPVFFGQFPQAFWGTIGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGFGKFF 129 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 T+ +IILPQT + S+ I+ +K T+ + + I E+ ++ I++ Sbjct: 130 TLFYIILPQTFRRVVPSMLSQIITTIKDTAYLAGLGIAELTYKSKTILAN 179 >gi|300313150|ref|YP_003777242.1| glutamate/aspartate ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300075935|gb|ADJ65334.1| ABC-type glutamate/aspartate transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 249 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 109/220 (49%), Gaps = 18/220 (8%) Query: 1 MKYEW-----FNLIIDSFP--QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI 53 M Y W + + D P L A + TL A +++++LI+G +R + Sbjct: 1 MHYNWNWGIFWEMSPDGIPYIDTLLAGLKWTLATAACAWIMALILGTIFGTLRTTTKPWV 60 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF----------DSFVAIIISLTLNFS 103 + I + YV +FR PLLVQ+F+ ++ +P + F SFV ++L S Sbjct: 61 VR-IANGYVELFRNIPLLVQMFLWYFVMPELLPAFIGDWIKSLPDASFVTATLALGFFTS 119 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 + ++ + + I ++P+GQ A A+GLT QT R+++LP L++EF +I+K++ Sbjct: 120 SRVAVQVTTGIQALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIIIPALTNEFAAIIKNS 179 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 SVA TI + E+ + T+Q +Y+I++ Sbjct: 180 SVALTIGLVELTAATYSMREFTFQTFEALTGATIIYVIIS 219 >gi|227326270|ref|ZP_03830294.1| putative ABC transporter, permease [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 293 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 62/191 (32%), Positives = 102/191 (53%), Gaps = 25/191 (13%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFY----------GLPHIGIVF---------DSFVA 93 ++S + Y+W+FR PL++ L +++ G+P IVF D F Sbjct: 84 LLSTLSWLYIWLFRSLPLILVLIILYNFSYLYDELALGIPFTSIVFLNYPTIDLLDQFSV 143 Query: 94 IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS 153 ++ LTL SAY +EIIR I+ + GQ++AS A+GL + IILPQ + S +P Sbjct: 144 AVLGLTLVQSAYTAEIIRGGILGVDAGQFEASAALGLPGSRRTVRIILPQAL-RSILPTG 202 Query: 154 -SEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQ 210 +E IS+ K TS+ + +PE+F T Q I + T Q PL++ + YL++T+ ++Q Sbjct: 203 FNEIISLAKGTSIVYVLALPELFYTVQVIYNRTQQVIPLLMVATIW--YLLITTVLSVVQ 260 Query: 211 IKIESSVTQHT 221 +E V++ Sbjct: 261 YYVERYVSRGA 271 >gi|119387392|ref|YP_918426.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119377967|gb|ABL72730.1| amino acid ABC transporter membrane protein 2, PAAT family [Paracoccus denitrificans PD1222] Length = 214 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 97/179 (54%), Gaps = 7/179 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTII---SLIMHFYVWIFRGTPLLVQLFVIFYG 80 T+ ++ + FV ++G IA+ R S + SL++ F +G PL V +FV+++G Sbjct: 19 TIILSLLGFVGGTVLGLPIALARSSNSKALRVASSLLVQF----IQGVPLPVIMFVVYFG 74 Query: 81 LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 + G + VA +++TL AY+ EI + I ++PK QW+A+ + LT Q +++ Sbjct: 75 ISIGGFEVPALVAAGLAMTLYSGAYLGEIWKGCIQAVPKTQWEAAECLALTPAQRFVYVV 134 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 LPQ + + P + I+K+TS A I ++ +A+ I ++T+ P ++ A +Y Sbjct: 135 LPQALRIAIPPTVGFMVQIVKNTSYAVVINFFDLTYSAKVINNSTFMPFTVFTLAAAIY 193 >gi|298735824|ref|YP_003728349.1| polar amino acid transport system permease protein [Helicobacter pylori B8] gi|298355013|emb|CBI65885.1| polar amino acid transport system permease protein [Helicobacter pylori B8] Length = 210 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 4/190 (2%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 S P L + +TL I+ ++SL++GF A++ ++F IS +++ Y I R TPLL Sbjct: 4 SIPAFL-KGLELTLYISFFGILLSLLVGFLCAIV-LYFKMRFISPVVYVYGEIARNTPLL 61 Query: 72 VQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +QLF ++YGL IG+ + I++L Y+S+ S+ Q +++ ++G + Sbjct: 62 IQLFFLYYGLNEIGL--SALECAILALGFLGGGYMSQSFLLGFKSLASIQRESALSLGFS 119 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 + + +IILPQ+++ S + + I +LK TSV I + +I A+ ++ Y+ Sbjct: 120 PLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKDLIGIYYKTTES 179 Query: 192 YCELAFVYLI 201 L+ YLI Sbjct: 180 LLMLSLTYLI 189 >gi|167750528|ref|ZP_02422655.1| hypothetical protein EUBSIR_01504 [Eubacterium siraeum DSM 15702] gi|167656454|gb|EDS00584.1| hypothetical protein EUBSIR_01504 [Eubacterium siraeum DSM 15702] Length = 228 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 61/187 (32%), Positives = 104/187 (55%), Gaps = 11/187 (5%) Query: 7 NLIID------SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 NL ID +F +LL + L I+ +S IS+ +G + V+ + + I+ ++ Sbjct: 7 NLGIDVLFKGTNFIRLL-GGLWTALWISLVSVAISIPLGIGMGVL-MTKKNRILKAVLRV 64 Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ R P LV LF++F+G G A II L +A + +++R ++ISIPK Sbjct: 65 YLEFIRIMPQLVLLFIMFFGTTRAFGWDLSGEAASIIVFVLWGTAEMGDLVRGALISIPK 124 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS-ILKSTSVASTITIPEIFQTA 178 Q+++S A+GLT QT ++I+PQTI +PLS I+ ++K+TS+ I + E+ + A Sbjct: 125 HQYESSEALGLTNAQTYLYVIIPQTI-RRLIPLSINLITRMIKTTSLILMIGVVEVLKVA 183 Query: 179 QRIVSTT 185 Q+I+ Sbjct: 184 QQIIEAN 190 >gi|12831455|gb|AAK08610.1| GtpC [Agrobacterium tumefaciens] Length = 222 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 110/197 (55%), Gaps = 4/197 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F I+++ P L+ + + +TL ++ I+ ++S IIG +++R + + YV Sbjct: 6 FAYILEALPDLM-SGLRMTLLVSFIAILLSCIIGVIGSIMRTS-GVKALEYTVTAYVEFI 63 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 RGTP LVQ+F +FYGLP +G+ F F + +I+LT SA+ E R+ + ++ +G DAS Sbjct: 64 RGTPFLVQIFFVFYGLPSLGLRFSIFWSGVIALTAWASAFQIENFRAGLAAVDRGMQDAS 123 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLS-SEFISILKSTSVASTITIPEIFQTAQRIVST 184 ++GL R I+LP +A+P S + ++ +K+++ I + E+ A ++ Sbjct: 124 ASLGLKRWHYGVFIVLPLA-ARAALPSSMNTIVATIKNSAYLQAIGLVELTFVAVDRIAY 182 Query: 185 TYQPLIIYCELAFVYLI 201 ++ + ++ + +YL+ Sbjct: 183 DFRAIEMFASICVIYLL 199 >gi|254508776|ref|ZP_05120888.1| ABC-type amino acid transport system, permease component [Vibrio parahaemolyticus 16] gi|219548296|gb|EED25309.1| ABC-type amino acid transport system, permease component [Vibrio parahaemolyticus 16] Length = 365 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 103/194 (53%), Gaps = 6/194 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + ++VTL IA + V+SL IG +A+ R II I Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVALALGR-RSEMPIIRSICTVYIEVWRGVPLITVLFMA 213 Query: 78 FYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 LP G D + +I + + +AY++E++R + +IPKGQ++A+ A+GL+ + Sbjct: 214 SVMLPLFLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWK 273 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + IILPQ + + + + FI + K TS+ I + ++ Q +T + L E Sbjct: 274 KMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPEWLGFATE 332 Query: 195 -LAFVYLILTSFCY 207 FV L+ FC+ Sbjct: 333 SYVFVALVFWVFCF 346 >gi|332283639|ref|YP_004415550.1| polar amino acid ABC transporter, inner membrane subunit [Pusillimonas sp. T7-7] gi|330427592|gb|AEC18926.1| polar amino acid ABC transporter, inner membrane subunit [Pusillimonas sp. T7-7] Length = 223 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 98/166 (59%), Gaps = 1/166 (0%) Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSS 113 + +++ Y+ + R TP L+QLF F+ LP G+ + + A ++++ N AY +EI+R+ Sbjct: 53 VRWLINIYIEVIRNTPFLIQLFFFFFALPAAGVRWSPYTAALVAMVFNLGAYATEIVRAG 112 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I SIPKGQ +A A+ L+R + R ++L + L+S+FI ++ ++SV S I+ + Sbjct: 113 IESIPKGQIEAGLALNLSRLEVFRFVVLKPALKAIYPALTSQFILLMLASSVVSVISADD 172 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT-SFCYIIQIKIESSVT 218 + A + S T++ IY + +YL+LT +F ++ ++ + S+ Sbjct: 173 LTSVAANLQSETFRSFEIYIVVTGIYLLLTLAFTFVFRLAYQWSLN 218 >gi|251789977|ref|YP_003004698.1| arginine transporter permease subunit ArtQ [Dickeya zeae Ech1591] gi|247538598|gb|ACT07219.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 238 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 78/129 (60%) Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 F+ +I+L+L ++AY S+ +R ++ ++P+GQW++ A+G+++ R +I+PQ + Sbjct: 104 FLCGVIALSLLYAAYASQTLRGALKAVPQGQWESGQALGMSKGVIFRRLIMPQMWRHALP 163 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 L ++++ +LK T++ S I++ ++ + I + T +P Y A +YL++T I Sbjct: 164 GLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYMIAAAIYLVITLLSQAIL 223 Query: 211 IKIESSVTQ 219 +IE+ T+ Sbjct: 224 KRIETRATR 232 >gi|119718791|ref|YP_925756.1| polar amino acid ABC transporter, inner membrane subunit [Nocardioides sp. JS614] gi|119539452|gb|ABL84069.1| amino acid ABC transporter membrane protein, PAAT family [Nocardioides sp. JS614] Length = 241 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 5/149 (3%) Query: 36 LIIGFFIAVIRIFFSD--TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG---IVFDS 90 L++G +A++R S T I L+ Y FRG P ++ +F+ +G+P +G + D Sbjct: 48 LLLGGAVAIVRSTVSPLLTPIRLLAVVYTDFFRGVPTILVVFLFAFGIPALGLQGVPNDL 107 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 V +L L++ AY++E+IR+ I S+ Q ++ A+GL+R Q +R ++LPQ + Sbjct: 108 AVLGTAALVLSYGAYVAEVIRAGIDSVHPSQVASAEALGLSRAQAMRFVVLPQGVRRVVP 167 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQ 179 PL ++F+S+ K T++ + + E AQ Sbjct: 168 PLINDFVSLQKDTALVGAVGVFESLFAAQ 196 >gi|167841845|ref|ZP_02468529.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia thailandensis MSMB43] Length = 229 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 96/190 (50%), Gaps = 2/190 (1%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFYVWIFRGTPLLVQ 73 LL V TL ++ + IGF +AV+R+ + + + ++ Y +FR P LV+ Sbjct: 20 LLVQGFVATLVLSAVGCAAGFAIGFAVAVVRVTRTRALAPVRALLFAYCVVFRRIPFLVK 79 Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 L ++F+ G +F ++S++L SAY+ EI+RS + S+ Q +A+ + Sbjct: 80 LMLVFFASQSSGAKLSTFAVALVSVSLIASAYLGEIVRSGLESVHPNQREAAVTLNFGYL 139 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + +R++++PQ P F+ +K T++AS I + E+ + + + ++Y Sbjct: 140 KMLRYVVVPQAWRVIVPPTFGFFVMFIKDTALASQIGVMELTSAGKVLNDKGFSAGLVYG 199 Query: 194 ELAFVYLILT 203 + +Y +++ Sbjct: 200 AILLLYFVMS 209 >gi|71733225|ref|YP_274660.1| glutamine ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71553778|gb|AAZ32989.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 246 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 87/149 (58%), Gaps = 5/149 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V++ RG PLL+ +F ++ +P IG F ++ +L + SAY+ EIIR +I ++P Sbjct: 67 WVYVMRGIPLLMVIFWTYFLVPLLIGHNITGFTTMLCTLVVYQSAYLCEIIRGAIQALPA 126 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++AS A+G+ +T +ILPQ + + L S+FISI+K TS+ I + E+ A Sbjct: 127 GQYEASRALGMGYMRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINVQEVTFAAN 186 Query: 180 RIVSTTY-QPLIIYCELAFVYLILTSFCY 207 +I + +P ++ LA Y +L CY Sbjct: 187 QINNQLLTKPFQVFFILAITYNVL---CY 212 >gi|325524870|gb|EGD02817.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. TJI49] Length = 229 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 107/217 (49%), Gaps = 16/217 (7%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F +L+A V T+ ++ +S ++ +G AV ++ + ++ I Y + R P L Sbjct: 5 GFGPVLWAGTVQTIELSVLSLATAVALGLIGAVAKLS-HNRVLRAIATGYTTLIRSVPDL 63 Query: 72 VQLFVIFY-------------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 V + ++FY G I I D FVA +++L + AY +E R + +S+P Sbjct: 64 VLMLLLFYSIQIWLNQFTDLVGWDQIDI--DPFVAGVLTLGFIYGAYFTETFRGAFLSVP 121 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + A Sbjct: 122 RGQLEAGAAYGMSGMRVFVRIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAA 181 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q +T+ A +YL +T+ ++ I++E Sbjct: 182 QDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLEK 218 >gi|57237747|ref|YP_178995.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni RM1221] gi|86150632|ref|ZP_01068854.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151103|ref|ZP_01069319.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 260.94] gi|86152473|ref|ZP_01070678.1| amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|88596150|ref|ZP_01099387.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 84-25] gi|121613743|ref|YP_001000593.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 81-176] gi|157415176|ref|YP_001482432.1| amino acid ABC transporter permease [Campylobacter jejuni subsp. jejuni 81116] gi|167005524|ref|ZP_02271282.1| putative polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 81-176] gi|205356402|ref|ZP_03223167.1| putative ABC type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni CG8421] gi|218562538|ref|YP_002344317.1| putative ABC-type amino-acid transporter permease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315124412|ref|YP_004066416.1| putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|57166551|gb|AAW35330.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni RM1221] gi|85838893|gb|EAQ56160.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni CF93-6] gi|85842273|gb|EAQ59519.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 260.94] gi|85843358|gb|EAQ60568.1| amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|87248909|gb|EAQ71872.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 81-176] gi|88190991|gb|EAQ94963.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 84-25] gi|112360244|emb|CAL35039.1| putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|157386140|gb|ABV52455.1| putative polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 81116] gi|205345787|gb|EDZ32425.1| putative ABC type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni CG8421] gi|284926152|gb|ADC28504.1| amino acid ABC transporter permease [Campylobacter jejuni subsp. jejuni IA3902] gi|315018134|gb|ADT66227.1| putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315058358|gb|ADT72687.1| Putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni S3] gi|315927531|gb|EFV06864.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315932600|gb|EFV11531.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni 327] Length = 219 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 93/169 (55%), Gaps = 1/169 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L + +TL IA + +IS++ G F+A+ + + D + + Y+ IFR TPLL+ + Sbjct: 11 EFLMQGLFLTLKIALATCIISIVFGTFLAITKNY-GDRLSKFLAACYIDIFRNTPLLLWM 69 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 + LP F I +L S+ ++EIIR + SIPKGQ++A+Y+ G + Sbjct: 70 LAACFVLPVFFGQFPQAFWGTIGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGFGKFF 129 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 T+ +IILPQT L S+ ++ +K T+ + + I E+ ++ I++ Sbjct: 130 TLFYIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAELTYNSKTILA 178 >gi|253690350|ref|YP_003019540.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756928|gb|ACT15004.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 407 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 50/155 (32%), Positives = 87/155 (56%), Gaps = 4/155 (2%) Query: 52 TIISLI-MHFYVWIFRGTPLLVQLFVIFYGLPHIG--IVFDSFVAIIISLTLNFSAYISE 108 T+ +LI + VW G P + I G G V F A+++ + L SA+I+E Sbjct: 235 TLAALIGLPLLVWWLSGAPAELDR-PILRGFNFRGGFTVSPEFTALLLGIALYSSAFIAE 293 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I+R+ I SIPKGQ +A+ A+ + +RHII+PQ + PL+S+++S+ K++S+A Sbjct: 294 IVRAGIQSIPKGQLEAARALSFSPWHMMRHIIIPQAMRVIVPPLTSQYVSLSKNSSIAVV 353 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + PE+ + +++ T Q L + + VYL ++ Sbjct: 354 VGYPELANISNTLMNQTGQALEVIAIMMVVYLTVS 388 >gi|221197498|ref|ZP_03570545.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2M] gi|221204171|ref|ZP_03577189.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2] gi|221176337|gb|EEE08766.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2] gi|221184052|gb|EEE16452.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2M] Length = 223 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 111/211 (52%), Gaps = 12/211 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM---HFYVWIFRGTPLLVQ 73 L + VT+ +A + + L++GF + + F+ + +L+ ++ FR TP L+Q Sbjct: 17 LLDGLKVTVVLAVAANAMGLVLGFVLCL----FAMSRWALVRWPAQLFIEFFRCTPALLQ 72 Query: 74 LFVIFYGLPHIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 + FY +P + VF D +++L LN +A+ +E R+ + ++PK DA+ A+GL Sbjct: 73 IIWFFYCIPMMVDVFIDPITMGVLALGLNLTAFNAEAYRAGVQAVPKEHLDAAVALGLRP 132 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 Q ++LPQ + + L + I L+ +++ + + + ++ A+ + + Y+PL Y Sbjct: 133 WQRTIFVVLPQALRNAMPVLLTNGIGSLQQSALVAIVAVADLMYVAKSLATQAYRPLETY 192 Query: 193 CELAFVYLILT----SFCYIIQIKIESSVTQ 219 +A VY L+ ++I+ + +++V + Sbjct: 193 SVVALVYFALSLPIARLVHVIERRQDAAVQR 223 >gi|170699698|ref|ZP_02890734.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170135398|gb|EDT03690.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 255 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 21/194 (10%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF--RGTPL 70 P+LL AA+ TL + +S + S++IG +A + S + WI RGTPL Sbjct: 13 MPKLL-AAVPTTLALLLLSGIASVVIGIPLA---LAASSRHVPYRWSARGWIMLIRGTPL 68 Query: 71 LVQLFVIFYGLPHI------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 LVQL++++YG I ++ D+F +++L++N AY++ I+R +I +P Sbjct: 69 LVQLYLLYYGFGQIVPREWMRDSWASPLLRDAFWYAVVALSVNEGAYVATILRGAIAGVP 128 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 G+ +A YA G+TR +R I+ P+ + L+ E I +LKST +AST+T+ ++ TA Sbjct: 129 AGEIEAGYAYGMTRAGVLRRIVGPRAWRLALPALTGEAILLLKSTVLASTVTVFDVMGTA 188 Query: 179 QRIVSTT---YQPL 189 + T Y+PL Sbjct: 189 NTLRFETLRVYEPL 202 >gi|320531679|ref|ZP_08032619.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320136099|gb|EFW28107.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 218 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 81/150 (54%), Gaps = 4/150 (2%) Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P L + +I LPH+GI F +++++L + S ++ E +RS I S+PKGQ +A+ A+ Sbjct: 62 PNLCLMVLIGLALPHVGITIPLFWSVVVALIFSSSGFVCETVRSGINSVPKGQIEAARAL 121 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+ IR I+LPQ + + PL + FI+ L +S+A+ I + E+ Q+I Sbjct: 122 GMPFGLIIRGIVLPQALARTIQPLVNIFIACLIGSSLAAAIGVVELTAVTQKINQDRAAG 181 Query: 189 LIIYCELAFVYLIL----TSFCYIIQIKIE 214 +I + YL + T +++ ++E Sbjct: 182 VITFLTSGLTYLAIAFAATKLGGLLERRLE 211 >gi|300693655|ref|YP_003749628.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum PSI07] gi|299075692|emb|CBJ34989.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum PSI07] Length = 247 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 50/200 (25%), Positives = 105/200 (52%), Gaps = 3/200 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L++ +P I TL ++ + V++ + +A+ R+ + +++ V+ Sbjct: 10 NWLLLLVGQYPNGPLGGIACTLILSVLGIVLAFPLSVALALARLSPWRALRAVVTAL-VY 68 Query: 64 IFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 RG PLL+ + +++ +P IG F ++ +L + Y+ E++R+ I ++PKGQ Sbjct: 69 AVRGVPLLMLILWVYFLVPLLIGHNVSGFTTMLCTLAIYEGVYLCEVVRAGIEALPKGQM 128 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A+G + +R +ILPQ + + ++F+S +K T++ I +PE+ A +I Sbjct: 129 EAARALGHSYLGAMRLVILPQALYNMLPSMLAQFVSTIKETTLGYVINVPELTFAANQIN 188 Query: 183 STTY-QPLIIYCELAFVYLI 201 + +P I+ LA +Y + Sbjct: 189 NALLSKPFQIFFLLAVIYFV 208 >gi|283956262|ref|ZP_06373742.1| putative polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 1336] gi|283791982|gb|EFC30771.1| putative polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 1336] Length = 219 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 93/169 (55%), Gaps = 1/169 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L + +TL IA + +IS++ G F+A+ + + D + + Y+ IFR TPLL+ + Sbjct: 11 EFLMQGLFLTLKIALATCIISIVFGTFLAITKNY-GDRLSKFLAACYIDIFRNTPLLLWM 69 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 + LP F I +L S+ ++EIIR + SIPKGQ++A+Y+ G + Sbjct: 70 LAACFVLPVFFGQFPQAFWGTIGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGFGKFF 129 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 T+ +IILPQT L S+ ++ +K T+ + + I E+ ++ I++ Sbjct: 130 TLFYIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAELTYNSKTILA 178 >gi|322418599|ref|YP_004197822.1| polar amino acid ABC transporter inner membrane subunit [Geobacter sp. M18] gi|320124986|gb|ADW12546.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter sp. M18] Length = 233 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 120/225 (53%), Gaps = 21/225 (9%) Query: 6 FNLIIDSF--------PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI 57 F ++ID+F P + +T+ +A VIS I+ FF +I S + ++I Sbjct: 7 FQVVIDNFTYFMIGRYPSGPLGGLGLTMYLA----VISCILSFFGGLILGLLSLSRFAVI 62 Query: 58 ---MHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 ++ ++ RG PLL+ +F +++ LP + G +I+ LTL SAY+S+I+R+ Sbjct: 63 RYPVNLFINTIRGLPLLMVIFWMYFLLPALMGRTVPEATTVIMGLTLFTSAYMSQIVRAG 122 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I IPKGQ +A+ + GL Q + +I+LPQ + ++F+S++K TS+A + + E Sbjct: 123 IQGIPKGQTEAAISTGLKPWQAMLYIVLPQGLRNMIPSFVNQFVSLIKDTSLAFIVGVSE 182 Query: 174 IFQTAQRIVSTTYQ-PLIIYCELAFVYLIL----TSFCYIIQIKI 213 + +I + T P I+ +A VY +L TSF ++ ++ Sbjct: 183 LTHVGTQINNRTMAYPTEIFIFIAAVYFVLCFAFTSFSRWLEGRL 227 >gi|296139696|ref|YP_003646939.1| polar amino acid ABC transporter inner membrane subunit [Tsukamurella paurometabola DSM 20162] gi|296027830|gb|ADG78600.1| polar amino acid ABC transporter, inner membrane subunit [Tsukamurella paurometabola DSM 20162] Length = 316 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 62/232 (26%), Positives = 115/232 (49%), Gaps = 21/232 (9%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++EW + + + + +TL + ++F ++G +A +R++ + S+ F Sbjct: 53 RFEWPTVAHYFTQESILEGLGLTLWLTAVTFTAGFVLGIGLAAMRLWGGPLLQSVSFGF- 111 Query: 62 VWIFRGTPLLVQLFVIF-----YGLPHIGIVFDS-------------FVAIIISLTLNFS 103 VWI R P LV L F Y +GI F VA I+LTL+ + Sbjct: 112 VWIVRSVPPLVLLLFWFQLASLYPQLSLGIPFGPEFVTFNTTHLIAPLVAAFIALTLDVA 171 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEF-ISILKS 162 A+ +EI+R ++S+ GQ +A+ ++GL ++ R I+LPQ + + +P S I +LKS Sbjct: 172 AFAAEIVRGGLVSVDPGQTEAARSLGLNPRRIFRRIVLPQAMP-AIIPSSGNLLIGLLKS 230 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+ S I + ++ + Q I + ++ + + Y+++TS I Q +E Sbjct: 231 TSLVSVIAVTDLLYSVQLIYNQNFKVMPLLLVATIWYIVITSVLAIGQYFVE 282 >gi|148926600|ref|ZP_01810282.1| putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845294|gb|EDK22388.1| putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni CG8486] gi|307747817|gb|ADN91087.1| Amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni M1] Length = 221 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 93/169 (55%), Gaps = 1/169 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 + L + +TL IA + +IS++ G F+A+ + + D + + Y+ IFR TPLL+ + Sbjct: 13 EFLMQGLFLTLKIALATCIISIVFGTFLAITKNY-GDRLSKFLAACYIDIFRNTPLLLWM 71 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 + LP F I +L S+ ++EIIR + SIPKGQ++A+Y+ G + Sbjct: 72 LAACFVLPVFFGQFPQAFWGTIGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGFGKFF 131 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 T+ +IILPQT L S+ ++ +K T+ + + I E+ ++ I++ Sbjct: 132 TLFYIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAELTYNSKTILA 180 >gi|241203419|ref|YP_002974515.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857309|gb|ACS54976.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 235 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 16/207 (7%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGTPL 70 P+LL A LP+ ++I+GF +A+I F ++S + YV R P+ Sbjct: 8 PELLKA-----LPLTLAITFTAMIVGFLLALITTTFRVRRIPVVSQLADLYVSYARSVPV 62 Query: 71 LVQLFVIFYGLPHIGIVFD------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 ++QLFV FYGLP + +F+ VA I+ L+L Y+SE++R + +++ +GQ DA Sbjct: 63 VLQLFVAFYGLPLVVALFEVEDFVSPNVAAIVGLSLYHGGYLSEVLRPAYLAVERGQHDA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G T Q I ++ PQ + + + I ++ + ++ I ++ TA ++ Sbjct: 123 ADSLGYTFLQKILRVVGPQAVHIALPGYGNSIIYLIHNVALVMYIGAADVMATAHLVMER 182 Query: 185 TYQ--PLIIYCELAFVYLILTSFCYII 209 Y Y LA +Y +L +I+ Sbjct: 183 DYNQYQFETYLVLAVIYSLLCLVAWIV 209 >gi|33591940|ref|NP_879584.1| glutamate/aspartate transport system permease protein [Bordetella pertussis Tohama I] gi|33599320|ref|NP_886880.1| glutamate/aspartate transport system permease protein [Bordetella bronchiseptica RB50] gi|33571584|emb|CAE41073.1| glutamate/aspartate transport system permease protein [Bordetella pertussis Tohama I] gi|33575366|emb|CAE30829.1| glutamate/aspartate transport system permease protein [Bordetella bronchiseptica RB50] gi|332381357|gb|AEE66204.1| glutamate/aspartate transport system permease protein [Bordetella pertussis CS] Length = 227 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 101/196 (51%), Gaps = 10/196 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + IID+ P L + +L + S +++G +A+ R++ ++ YV +F Sbjct: 6 YQAIIDALPYLFLTGLRFSLLLTLSSAAGGVVLGALLAIARLY-GRRWVAWPAAIYVNLF 64 Query: 66 RGTPLLVQLFVIFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 R PL++ +F+I++ LP++ IV + + ++ L +AY SEIIR+ I S Sbjct: 65 RSLPLVLVIFLIYFILPYLLQWITQAERPIVLGATGSAFVTFILFEAAYFSEIIRAGIGS 124 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + GQ+ A A+GLT Q +R +ILPQ + L ++ I I + T++ +++P+ Sbjct: 125 VGPGQYAAGSALGLTHGQVLRKVILPQAVRNMLPVLLTQVIVIFQETALVYVLSLPDFLG 184 Query: 177 TAQRIVSTTYQPLIIY 192 A +I + + +Y Sbjct: 185 AATKIAQRDNRLVEMY 200 >gi|325695481|gb|EGD37381.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK150] Length = 230 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 87/149 (58%), Gaps = 10/149 (6%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-----IGIVFDSF---VAIIISLTLNFSAYISEIIRS 112 Y++I R TP +V LF++FYG+P +G+ +++ V +II++ L F+A I+E+ ++ Sbjct: 59 YIFILRCTPPIVLLFLVFYGIPEFLEWWLGLDINNWSRTVFVIITMILLFAAMIAEVFKA 118 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +++PKGQ +A +IGL QT I+LPQ + L++ +++++ ++A TI Sbjct: 119 AYLAVPKGQTEAGLSIGLAPVQTFLRIVLPQAFRIALPNLTTALLNLMRDAALAYTIGAV 178 Query: 173 EIFQTAQRIVSTTYQ--PLIIYCELAFVY 199 ++ Q ++S L Y +A +Y Sbjct: 179 DVMGAGQNLISRNLGNYSLETYTAVALIY 207 >gi|224371422|ref|YP_002605586.1| GltJ2 [Desulfobacterium autotrophicum HRM2] gi|223694139|gb|ACN17422.1| GltJ2 [Desulfobacterium autotrophicum HRM2] Length = 240 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 111/227 (48%), Gaps = 12/227 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++W L + ++ + I TL ++ ++ +++++G +A R+F + + +L + YV Sbjct: 6 FDWSVLWRQPYGAMMLSGIWTTLTLSLAAWCVAVVLGIGVAACRVFHNKCLRALGLG-YV 64 Query: 63 WIFRGTPLLVQLFVIFYGLPHI------GIVFD-----SFVAIIISLTLNFSAYISEIIR 111 +FR P LVQLF ++ P + ++D +F L + ++ ++E R Sbjct: 65 LVFRNIPFLVQLFFWYFAAPLLLPRSIQDWMYDTVPEYAFWCGATGLGMYTASRVAEQFR 124 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + ++I + Q+ A+YA GL Q ++ILP ++EF++ K++++ TI + Sbjct: 125 AGFLAISEDQYRAAYATGLRPAQVYGYVILPYAFRIIIPAFTTEFLTCFKNSALTMTIGV 184 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 EI TA I S T+ L + YL + ++ +IE T Sbjct: 185 MEITHTAYIIDSFTWHGLETTTAASLCYLTIAQGVALVMWRIEKWTT 231 >gi|126731933|ref|ZP_01747736.1| ABC transporter, membrane spanning protein (amino acid) [Sagittula stellata E-37] gi|126707465|gb|EBA06528.1| ABC transporter, membrane spanning protein (amino acid) [Sagittula stellata E-37] Length = 461 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 12/198 (6%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +TL +A VISL +G +A+ R + II ++ + RG PL+ LF Sbjct: 250 WGGLTITLVVAIFGIVISLPVGMLLALGRRS-NAPIIKYSSVIFIEVVRGIPLISVLFFA 308 Query: 78 FYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 LP+ G+ F+ + +I + L SAY++E+IR + +IPKGQ++ ++GL+ Q Sbjct: 309 SAMLPYFLEPGVDFNKLLRAMIGVVLFASAYMAEVIRGGLQAIPKGQYEGGMSLGLSFWQ 368 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV-----STTYQPL 189 +R II+PQ +TT + + FI + K T++ I+I ++ + ST Sbjct: 369 QMRLIIMPQALTTVIPGIVNTFIGLFKDTTLVLIISIFDLLGILNNTLKDPEWSTPTTAY 428 Query: 190 IIYCELAFVYLILTSFCY 207 Y +A +Y I FC+ Sbjct: 429 TGYLTIALIYWI---FCF 443 >gi|4204970|gb|AAD10860.1| orf Q; putative ATP-binding cassette transport system; similar to integral membrane proteins and to components of ABC transport systems [Leuconostoc lactis] Length = 226 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 103/191 (53%), Gaps = 6/191 (3%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + T+ I+ S V+ +IG + + S + L+ Y+ IFR P + LF+ + Sbjct: 20 GGLETTIVISLTSIVLGTLIGIVLGALWTL-SGKWVKLVFKIYLEIFRIIPTIPLLFLFY 78 Query: 79 YGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 Y LP +G+ + I+ L F+A S+IIR SI S+P+ Q ++++A+GL+ Q R Sbjct: 79 YILPRDLGVNLPAVQVSILVFALWFAAEFSDIIRGSIQSVPRQQRESAFALGLSTFQIFR 138 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ----PLIIYC 193 +++PQ + T+ P + I+K+TS+ I++ ++ Q+I+ Q P++IY Sbjct: 139 FVLIPQGLLTAISPFINLSTRIIKTTSILLLISVTDVITVGQQIIEANSQNTVIPILIYG 198 Query: 194 ELAFVYLILTS 204 +A +Y ++ + Sbjct: 199 IIALLYWLVNA 209 >gi|268592305|ref|ZP_06126526.1| glutamate/aspartate ABC transporter, permease protein [Providencia rettgeri DSM 1131] gi|291312086|gb|EFE52539.1| glutamate/aspartate ABC transporter, permease protein [Providencia rettgeri DSM 1131] Length = 250 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/193 (29%), Positives = 104/193 (53%), Gaps = 29/193 (15%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI---MHFYVWIFRGTPLLVQLFV 76 ++T+ I+ + V + ++GF +A + D+ I+L+ + Y+ IFR TPLLVQLF Sbjct: 27 GFLITIWISICTIVAATVLGFIVASAK----DSQITLVRWAVSIYISIFRNTPLLVQLFF 82 Query: 77 IFY--------------GLPH----IGIVFD----SFVAIIISLTLNFSAYISEIIRSSI 114 ++ PH +GI F+A I LTL +I+E IR+ I Sbjct: 83 WYFASGEILPSAAMEWLNTPHEVHLLGITVGWPSFEFLAGFIGLTLYTVPFIAEEIRAGI 142 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 + +GQ A++A+GLT Q ++ ++LPQ + + PL ++++++K++S+ I + E+ Sbjct: 143 RGVRQGQKYAAFALGLTSWQAMKLVVLPQAVKIAMPPLLGQYMNVVKNSSLTMAIGVAEL 202 Query: 175 FQTAQRIVSTTYQ 187 ++++ S T Q Sbjct: 203 SYVSRQVDSQTLQ 215 >gi|126641538|ref|YP_001084522.1| glutamate/aspartate transport protein [Acinetobacter baumannii ATCC 17978] Length = 196 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 90/163 (55%), Gaps = 15/163 (9%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI---------G 85 ++IG +A++R+ ++ + S FYV +FRG PL+ +F+ ++ LP I G Sbjct: 4 GILIGTPLAMMRLS-NNALASNFAKFYVDLFRGIPLIQVIFIFYFLLPKIFEFQSDTYWG 62 Query: 86 IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTI 145 +F S +++ + +A+ SEI+RS I SI KGQ +A YA+G T Q++R+++LPQ Sbjct: 63 PLFSS----VVTFAIFEAAFFSEIVRSGIQSISKGQVNAGYALGFTYGQSMRYVVLPQAF 118 Query: 146 TTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 L ++ I + + S+ I+ P+ A + + TY P Sbjct: 119 RNMLPVLLTQTIILFQDVSLVYVISAPDFLGRADTL-ANTYGP 160 >gi|312115425|ref|YP_004013021.1| polar amino acid ABC transporter inner membrane protein [Rhodomicrobium vannielii ATCC 17100] gi|311220554|gb|ADP71922.1| polar amino acid ABC transporter, inner membrane subunit [Rhodomicrobium vannielii ATCC 17100] Length = 230 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 14/209 (6%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVW 63 F +IID+ P L +V TL + ++ + + G +A++R+ + L I YV Sbjct: 7 FQVIIDALPYLFLQGMVFTLKLTILAAIFGTLFGTVLALMRL---SGVWPLPQIAGAYVN 63 Query: 64 IFRGTPLLVQLFVIFYGLPHIG---------IVFDSFVAIIISLTLNFSAYISEIIRSSI 114 R PLL+ +F F+ +P I I D F+ +I+ +L + + SEI+R+ I Sbjct: 64 FVRSLPLLLVIFWFFFLVPFIAQKMVGSPRPIPIDPFLTALITFSLFEAVFFSEIMRAGI 123 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+PKGQ A YA+GL+ Q +R I+LPQ L ++ I + + TS+ +++ + Sbjct: 124 QSLPKGQVAAGYALGLSYTQVMRRIVLPQAFRNMLPVLLTQTIVLFQDTSLVYVLSLNDF 183 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILT 203 A +I + +Y A VY +++ Sbjct: 184 LGIAGKIGQRDGRLTEMYIFAALVYFLIS 212 >gi|70732345|ref|YP_262101.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68346644|gb|AAY94250.1| amino acid ABC transporter, permease protein VC1862 [Pseudomonas fluorescens Pf-5] Length = 237 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 114/227 (50%), Gaps = 16/227 (7%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + D + L +V+L I+ +FV+ L IG +A+I++ ++ L + Y ++R Sbjct: 12 VADGWLGALAQGALVSLQISAGAFVLGLGIGLLVAMIKLKGPRWLVKL-ANVYTTLYRAM 70 Query: 69 PLLVQLFVIFYG-----------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 P L+ + +++Y + + + F+A ++ L + AY +EIIR +I +I Sbjct: 71 PELLLILLLYYAGTDLLNMAMAAMDRPSVTVNGFIAAVLVLGIVQGAYSAEIIRGAIQAI 130 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ +A+ A G+ R +R I+LP + + LS+ ++ ++K +++ S + E+ Sbjct: 131 PHGQIEAARAYGIERWLLVRRILLPSMLPYAMAGLSNLWLVLVKDSALISIVGYSELLSV 190 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT----SFCYIIQIKIESSVTQH 220 ++ +T L+ Y +A Y ++T S +++ + + QH Sbjct: 191 GKQAAGSTKHYLVFYLAVAAFYFVITLVSGSVFRVLERRTNRWLPQH 237 >gi|260461177|ref|ZP_05809426.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259033211|gb|EEW34473.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 237 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 52/210 (24%), Positives = 109/210 (51%), Gaps = 13/210 (6%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +L + L A VT ++ + F++ + G A R+ + + S + Y +FR Sbjct: 9 SLGKGGWGGALLLAAGVTFALSVLGFLLGALFGAVAAGGRLS-TRALPSWVAKGYGTVFR 67 Query: 67 GTPLLVQLFVIFYG----LPHIGIVFDS--------FVAIIISLTLNFSAYISEIIRSSI 114 G P L+ +++++YG L IG F S F ++++ + AY +E+ R + Sbjct: 68 GVPDLLTIYLLYYGGSIALTEIGKFFGSAGFVGLPTFATGVLAIGIISGAYQAEVYRGAY 127 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +++ GQ++AS A+GL+R Q++R +I+PQ + + L + + +LK +++ S I + E+ Sbjct: 128 LAVDLGQFEASKALGLSRFQSLRLVIVPQLMRHALPGLGNVWQLVLKDSALISVIGLVEL 187 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 + +Q + +P + Y A +Y ++ + Sbjct: 188 MRQSQIGAGSMREPFVFYVAAATLYFLIAA 217 >gi|237798793|ref|ZP_04587254.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021646|gb|EGI01703.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM [Pseudomonas syringae pv. oryzae str. 1_6] Length = 236 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 10/155 (6%) Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVF----------DSFVAIIISLTLNFSAYISE 108 FY ++FRGTPL +QL + + G+ + V D+ I++ LN AY +E Sbjct: 60 QFYTYLFRGTPLYIQLLICYTGIYSLAAVREQPVLDAFFRDAMNCTILAFALNTCAYTTE 119 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I +I S+ G+ +A+ A GLT + ++I+P + S S+E I +L ST+VA T Sbjct: 120 IFAGAIRSMAHGEVEAAKAYGLTGWKLYTYVIMPSALRRSLPYYSNEVILMLHSTTVAFT 179 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 T+P+I + A+ S T+ + A +YL +T Sbjct: 180 ATVPDILKVARDANSATFMTFQSFGIAAAMYLTVT 214 >gi|167574646|ref|ZP_02367520.1| amino acid ABC transporter, permease/ATP-binding protein [Burkholderia oklahomensis C6786] Length = 342 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 107/199 (53%), Gaps = 26/199 (13%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV----------IFYGLPHIGIV 87 +G +A+ R+ S I++ ++W+FR PL+V L + ++ G+P GI Sbjct: 96 LGVPLALARVSRS-PIVAACAWAFIWLFRSIPLVVLLLILNNLGYLYDHVWLGVPFTGIT 154 Query: 88 F---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 F F A ++ LTLN +A+ +E IR I+S+ GQ +A+ A+GL R + Sbjct: 155 FADVATTDLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDPGQLEAAAALGLPRARQATR 214 Query: 139 IILPQTITTSAVPLS-SEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCEL 195 I+LPQ + + +P++ ++ IS+ K TS+ + +PE+F T Q I + PL++ + Sbjct: 215 IVLPQAM-RAFLPVAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATV 273 Query: 196 AFVYLILTSFCYIIQIKIE 214 YLI+ + I+Q ++E Sbjct: 274 --WYLIILTVLSIVQAQVE 290 >gi|327193818|gb|EGE60695.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli CNPAF512] Length = 252 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 104/197 (52%), Gaps = 3/197 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W L+I +P + TL ++ +S ++ A+ R+ S ++ + V+ Sbjct: 13 WLLLLIGQYPNGPLGGLANTLILSALSITLAFPASILFALARLSKSR-VLRWPVTALVYF 71 Query: 65 FRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 RG PLL+ + ++ +P + G SFV ++ +L + SA++SE++R+ I+++ GQ D Sbjct: 72 TRGVPLLMLILWSYFLVPLLTGADVPSFVTMLTTLVVYQSAFLSEVVRAGIVALGPGQMD 131 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIV 182 A+ A+G + +R+IILPQ + + S F+S +K T++ I +P++ F +Q Sbjct: 132 AARALGHSYMGAMRYIILPQALYNMIPSILSTFVSTIKDTTLGYVINVPDLTFAASQVNN 191 Query: 183 STTYQPLIIYCELAFVY 199 QP ++ LA VY Sbjct: 192 QLLTQPFQVFLILAIVY 208 >gi|313667602|ref|YP_004047886.1| ABC transporter [Neisseria lactamica ST-640] gi|313005064|emb|CBN86496.1| putative ABC transporter [Neisseria lactamica 020-06] Length = 222 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 100/192 (52%), Gaps = 8/192 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIG-FFIAVIRIFFSDTIISLIMH 59 M +EW L L +++T I+ IS S ++G F V+R + ++ I Sbjct: 1 MAFEW--LFEGKNAARLGEGLLLTAQISLISVAASCVLGTLFGLVLRS--RNRLVRFIGR 56 Query: 60 FYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 FY+ R P+LV LF +++GL GI F + TL A + +++R ++ SI Sbjct: 57 FYLETIRIVPILVWLFGLYFGLSVWTGIHIGGFWVCVWVFTLWGVAEMGDLVRGALESIE 116 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 K Q ++ A+GL+R+Q R+I LPQ++ + F ++K++S+AS I + E+ + Sbjct: 117 KHQVESGLALGLSRRQVFRYIELPQSVRRVLPGAVNLFTRMIKTSSLASLIGVIEVVKVG 176 Query: 179 QRIVSTTY--QP 188 Q+I+ + QP Sbjct: 177 QQIIENSLLTQP 188 >gi|312961910|ref|ZP_07776407.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311283720|gb|EFQ62304.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 321 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 24/211 (11%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY----------GLPHI 84 S+I+G +A+ R+ S + +L Y+W FR P L+ L +++ G+P Sbjct: 95 SVILGTALALARLSGSPLLAALAWG-YIWFFRSMPALLVLIILYNFAYLYDHIVLGVPFT 153 Query: 85 GIVF---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +VF F ++ L+L +AY +EIIR +I + GQ +A+ A+GL + Sbjct: 154 EVVFAEWSTVDVLSQFTTAVLGLSLMQAAYAAEIIRGGLIGVDAGQHEAAAALGLPASRR 213 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYC 193 I IILPQ + + +E I ++K TS+ + +PE+F T Q I + T PL+I Sbjct: 214 IFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVA 273 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 + YLI+T+ Q +E + T V Sbjct: 274 TV--WYLIITTVLTSAQYYVERHFARGTARV 302 >gi|310644454|ref|YP_003949213.1| amino acid abc transporter, permease protein [Paenibacillus polymyxa SC2] gi|309249405|gb|ADO58972.1| Amino acid ABC transporter, permease protein [Paenibacillus polymyxa SC2] Length = 225 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 101/177 (57%), Gaps = 9/177 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +LL ++VTL IA +S +I ++G + ++R S I ++ FY+ FR P+ Sbjct: 13 SNFERLL-GGLLVTLEIALLSIIIGTLLGILMGLLRTLQSKPI-RFVLRFYLETFRIIPI 70 Query: 71 LVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LV L+V+++G P + + + +I +L +A I +I+R ++ S+PK Q ++ A+G Sbjct: 71 LVWLYVVYFGFTPLLNVDISGELTAVIVFSLWGAAEIGDIVRGALESLPKHQVESGQALG 130 Query: 130 LTRKQTIRHIILPQTITT---SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 LT Q RH+++PQ + ++ L++ I K+TS+ I + E+ + Q+I+ Sbjct: 131 LTYWQLYRHVLIPQAVRRMLPGSINLATRMI---KTTSLVVLIGVVEVVKVGQQIIE 184 >gi|148273186|ref|YP_001222747.1| putative glutamate ABC transporter, permease [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831116|emb|CAN02068.1| putative glutamate ABC transpoter, permease component [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 215 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 98/183 (53%), Gaps = 6/183 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTPLLVQLFVIFYGL 81 TL + ++ + +L +G IA +RI + SL YV + R TPLL+ + Sbjct: 18 TLRLLGLTVLFALPLGVVIAAMRI---SPVASLRATSTVYVELLRNTPLLLVFTFFSVVI 74 Query: 82 PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 I A +++LTL + + +E IRS I S+P GQ +A+ +IGLT QT+ +IL Sbjct: 75 TSISGALPFMTAAVLALTLYTAPFFAEAIRSGINSVPVGQAEAARSIGLTFSQTLGSVIL 134 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI-IYCELAFVYL 200 PQ + T PL + I++ K+TS+A I E+F + + + ++ ++ +AF YL Sbjct: 135 PQAVRTVIPPLINVVIALTKNTSIAGAYFIYELFNVGRDVANANGNAVVWVFVGVAFFYL 194 Query: 201 ILT 203 I+T Sbjct: 195 IIT 197 >gi|255263364|ref|ZP_05342706.1| glutamine ABC transporter permease protein [Thalassiobium sp. R2A62] gi|255105699|gb|EET48373.1| glutamine ABC transporter permease protein [Thalassiobium sp. R2A62] Length = 277 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 116/208 (55%), Gaps = 12/208 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHF 60 + W ++ +FP+LL A ++ A + +I+ I+G +A+ R S + L I Sbjct: 56 FNW-DVFTKTFPKLLDAFLIDIAIFAWCAPLIA-IVGLLVALARDVRSPALFPLRIIGAA 113 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIV--FDS-FVAIIISLTLNFSAYISEIIRSSIISI 117 Y IFRG P+++ +++I +G+P +G+ ++S ++ ++L L +SAY++EI RS I S+ Sbjct: 114 YTDIFRGVPVILTVYLIGFGIPGLGLPRPYNSPYIWGSLALILTYSAYVAEIFRSGIDSV 173 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 K Q AS ++GL+ + T+ +ILPQ I + FI++ K ++ S I EIF+ Sbjct: 174 HKSQRAASESLGLSDRDTMWFVILPQAIRHVIPAQMNMFIALQKDVALLSFIGPVEIFRQ 233 Query: 178 A--QRIVSTTYQPLIIYCELAFVYLILT 203 A Q+ + + P Y A ++L +T Sbjct: 234 AGVQKSLLANFTP---YVGAALIFLAIT 258 >gi|241764989|ref|ZP_04762986.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] gi|241365423|gb|EER60210.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] Length = 266 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 81/139 (58%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTP L+ ++V F LP GI ++ + + + L+ +A ++E+ R+ ++++P+GQ +A Sbjct: 113 LRGTPTLLLIYVCFLVLPQAGIKLSTYWMLTLPVGLSTAAVVAEVYRAGVLAVPRGQTNA 172 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++GLT Q HI+ PQ + L ++ + ++K T+ +T E+ Q A+ I++ Sbjct: 173 ARSLGLTEAQVFFHIVFPQALRYIVPALVAQLVIVVKDTTFGYVVTYGELMQNAKVIIAN 232 Query: 185 TYQPLIIYCELAFVYLILT 203 + + +Y +A +Y ++ Sbjct: 233 YHALVPVYLVVAALYCLVN 251 >gi|50123384|ref|YP_052551.1| binding-protein-dependent transport system inner membrane component [Pectobacterium atrosepticum SCRI1043] gi|49613910|emb|CAG77363.1| binding-protein-dependent transport system inner membrane component [Pectobacterium atrosepticum SCRI1043] Length = 242 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 21 IVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG 80 +V++L S V+ I+G +A+ R +S ++++++ F FR P+++ +F ++ Sbjct: 30 LVMSLLAGVASAVLGTILGVALAMSRGGWS-ALLAMVLGF----FRAIPVIMLIFWTYFL 84 Query: 81 LPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 LP + G+ ++ +L L SAY++ +++ I++I +GQW A ++GL+R Q + I Sbjct: 85 LPIVFGVDIPEITTVVCALALIASAYLAHGVKAGIVAIGRGQWQAGLSLGLSRWQVLWQI 144 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVSTTYQPLIIYCELAFV 198 +LPQ + +++IS++K TS+A + + E+ F Q + P+ ++ +A V Sbjct: 145 VLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQVNNRSMVYPMEVFLFVALV 204 Query: 199 YLILTSFCYIIQI 211 Y + FC +++ Sbjct: 205 YFV---FCLSLEL 214 >gi|330965185|gb|EGH65445.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 246 Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 87/149 (58%), Gaps = 5/149 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V++ RG PLL+ +F ++ +P IG F ++ +L + SAY+ EIIR +I ++P Sbjct: 67 WVYVMRGIPLLMVIFWTYFLVPLLIGHNITGFTTMLCTLVVYQSAYLCEIIRGAIQALPT 126 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++AS A+G+ +T +ILPQ + + L S+FISI+K TS+ I + E+ A Sbjct: 127 GQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINVQEVTFAAN 186 Query: 180 RIVSTTY-QPLIIYCELAFVYLILTSFCY 207 +I + +P ++ LA Y +L CY Sbjct: 187 QINNQLLTKPFQVFFILAITYYVL---CY 212 >gi|296313422|ref|ZP_06863363.1| amino acid ABC transporter, permease protein [Neisseria polysaccharea ATCC 43768] gi|296840054|gb|EFH23992.1| amino acid ABC transporter, permease protein [Neisseria polysaccharea ATCC 43768] Length = 222 Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 101/192 (52%), Gaps = 8/192 (4%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIG-FFIAVIRIFFSDTIISLIMH 59 M ++W L L +++T I+ IS S ++G F V+R + ++ I Sbjct: 1 MAFDW--LFEGKNAARLGEGLLLTAQISLISVAASCVLGTLFGLVLRS--RNRLVRFIGR 56 Query: 60 FYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 FY+ R P+LV LF +++GL GI F + TL A + +++R ++ SI Sbjct: 57 FYLETIRIVPILVWLFGLYFGLSVWTGIHIGGFWVCVWVFTLWGVAEMGDLVRGALESIE 116 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 K Q ++ A+GL+R+Q R+I LPQ++ + + F ++K++S+AS I + E+ + Sbjct: 117 KHQVESGLALGLSRRQVFRYIELPQSVRRALPGAVNLFTRMIKTSSLASLIGVIEVVKVG 176 Query: 179 QRIVSTTY--QP 188 Q+I+ + QP Sbjct: 177 QQIIENSLLTQP 188 >gi|89069637|ref|ZP_01156976.1| putative amino-acid transport system permease abc transporter protein [Oceanicola granulosus HTCC2516] gi|89044835|gb|EAR50935.1| putative amino-acid transport system permease abc transporter protein [Oceanicola granulosus HTCC2516] Length = 264 Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 50/213 (23%), Positives = 111/213 (52%), Gaps = 23/213 (10%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++D+ + + ++VTL F ++ ++G +A+ + + FY+ I RG Sbjct: 37 VLDALAKGVRITVIVTLA----GFALASLMGLGLAMASLS-RHLALRQAARFYIEIVRGV 91 Query: 69 PLLVQL-FVIFYGLPHIGIVFDSFVAII-----------------ISLTLNFSAYISEII 110 P++V L +V F P + ++ A I ++L++ +SA+I+E+ Sbjct: 92 PIIVLLLYVAFVLAPALVAGWNEIGARIGLEPVRTRDFPFVWRATMALSIGYSAFIAEVF 151 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R+ + S+ +GQ +A+ A+GL+ + RH++ PQ PL ++F++++K +S+ S + Sbjct: 152 RAGLQSVDEGQVEAAEALGLSPWRRFRHVVFPQAFRRILPPLGNDFVAMVKDSSLVSVLG 211 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + ++ Q + + ++ Y +AF+YL++T Sbjct: 212 VADVTQMGKVTAAGNFRYFETYNMVAFIYLVMT 244 >gi|313680183|ref|YP_004057922.1| amino acid ABC transporter membrane protein 1, paat family [Oceanithermus profundus DSM 14977] gi|313152898|gb|ADR36749.1| amino acid ABC transporter membrane protein 1, PAAT family [Oceanithermus profundus DSM 14977] Length = 392 Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 64/94 (68%) Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 F +++++L L ++YI+EI+R +I S+PKGQW+A ++GL+ QT+R IILPQ + Sbjct: 258 EFSSVLLALVLYTASYIAEIVRGAIQSLPKGQWEAPASLGLSYAQTLRLIILPQAMRIVI 317 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 PL ++++++ K++S+A I PEI + V+ Sbjct: 318 PPLGNQYLNLTKNSSLAIAIAFPEIMSVYETTVN 351 >gi|224826828|ref|ZP_03699928.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] gi|224601048|gb|EEG07231.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] Length = 237 Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 94/178 (52%), Gaps = 11/178 (6%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + +TL + S I ++ +AV R+ + +I + FY ++FRGTPL +QL V + Sbjct: 21 SGVAMTLWLLVASIGIGFVLAVPLAVARVS-PNPLIRGPVWFYTYVFRGTPLYIQLLVFY 79 Query: 79 YGLPHIGIV-----FDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ I V D+F +++ LN AY EI +I + P G+ +A+ A Sbjct: 80 TGIYSIESVRAQPLLDAFFREGINCTLLAFALNTCAYTVEIFAGAIRATPYGEIEAARAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 G++ R +ILP + + S+E I +L ST++A T T+P+I + A+ + S TY Sbjct: 140 GMSSFTLYRRVILPSALRRALPYYSNEVILMLHSTTLAFTATVPDILKVARDVNSATY 197 >gi|194398452|ref|YP_002038094.1| amino acid ABC transporter permease [Streptococcus pneumoniae G54] gi|194358119|gb|ACF56567.1| amino acid ABC transporter, permease protein, putative [Streptococcus pneumoniae G54] Length = 266 Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 60/223 (26%), Positives = 107/223 (47%), Gaps = 28/223 (12%) Query: 9 IIDSFP---QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + D P Q L I++T+ A V++L+ + + R+ I+ + F+V Sbjct: 30 VFDGIPRIVQQLPTTIMLTIGGALFGLVLALLFAI-VKINRV----KILYPLQAFFVSFL 84 Query: 66 RGTPLLVQLFVIFYGLP--------HIGIVFDSFVAIIISLTL-----NFSAYISEIIRS 112 +GTP+LVQL + +YG+P G + + + N +AY SE IR+ Sbjct: 85 KGTPILVQLMLTYYGIPLALKALNQQWGTGLNINAIPAAAFAIVAFAFNEAAYASETIRA 144 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I+S+ G+ +A+ ++G+TR Q R +I+P + L + I + K TS+A + + Sbjct: 145 AILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKGTSLAFSAGVV 204 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 E+F AQ Y+ + +A VY +++ I IES Sbjct: 205 EVFAQAQIXGGADYRYFERFXSVALVY-------WVVNIGIES 240 >gi|116254671|ref|YP_770507.1| putative transmembrane ABC transport protein [Rhizobium leguminosarum bv. viciae 3841] gi|115259319|emb|CAK10454.1| putative transmembrane ABC transport protein [Rhizobium leguminosarum bv. viciae 3841] Length = 591 Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 70/233 (30%), Positives = 115/233 (49%), Gaps = 32/233 (13%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EWF F + + + TL + ++ + I+G +A+ R+ S ++S + Y+W Sbjct: 66 EWF------FAEPVLVGLGRTLLLTVLAAISGSILGTALALARVSRS-PLLSGLSWGYIW 118 Query: 64 IFRGTPLLVQLF----------VIFYGLPHIGIVF---------DSFVAIIISLTLNFSA 104 + R P++V L I G+P VF F A + LTLN SA Sbjct: 119 LLRSIPVIVLLLILNNLGYLYETIKIGIPFTDTVFLDYPTVQLLTPFAAAFLGLTLNQSA 178 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS-SEFISILKST 163 + +EI+R I+S+ GQ +A+ A+GL R++ I+LPQ + S +P +E I + KST Sbjct: 179 FFAEIVRGGILSVDHGQLEAAAALGLPRRRQAFRIVLPQAM-RSILPTGFNELIGLAKST 237 Query: 164 SVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 S+ + +PE+F T Q I + PL++ + YLI+ + I Q IE Sbjct: 238 SMVYVLALPELFYTVQVIYRRNLEVIPLLMVATV--WYLIIMTVLSIAQRYIE 288 >gi|330877714|gb|EGH11863.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 247 Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 87/149 (58%), Gaps = 5/149 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V++ RG PLL+ +F ++ +P IG F ++ +L + SAY+ EIIR +I ++P Sbjct: 67 WVYVMRGIPLLMVIFWTYFLVPLLIGHNITGFTTMLCTLVVYQSAYLCEIIRGAIQALPT 126 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++AS A+G+ +T +ILPQ + + L S+FISI+K TS+ I + E+ A Sbjct: 127 GQYEASRALGMGYVRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINVQEVTFAAN 186 Query: 180 RIVSTTY-QPLIIYCELAFVYLILTSFCY 207 +I + +P ++ LA Y +L CY Sbjct: 187 QINNQLLTKPFQVFFILAITYYVL---CY 212 >gi|226366162|ref|YP_002783945.1| glutamate ABC transporter permease protein [Rhodococcus opacus B4] gi|226244652|dbj|BAH55000.1| glutamate ABC transporter permease protein [Rhodococcus opacus B4] Length = 299 Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 24/205 (11%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIFRGTPLLV------QLFV 76 TL A +S V +LI+G + + R+ SD + + V +FR P+L+ QLF Sbjct: 73 TLVAAAVSIVFALILGAILGIGRL--SDHRPVRWVAGGIVELFRAIPVLILMIFSYQLFA 130 Query: 77 IFYGLPHIGIVFDS----FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 + VF S A+I+ LTL + I+EI+R+ I S+PKGQ +A+ A+G+ + Sbjct: 131 EYE-------VFKSKYLALAAVIVGLTLYNGSVIAEIVRAGINSLPKGQSEAAMALGMRK 183 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTYQPLI 190 Q +R I+LPQ +T + S+ + LK +++ I E+ ++ Q++ + Y P + Sbjct: 184 SQVMRTILLPQAVTAMLPAIISQMVVALKDSALGYLIGYVEVVRSGQQLGAFYGNYLPAL 243 Query: 191 IYCELAFVYLILTSFCYIIQIKIES 215 I +A + +IL ++ ++E Sbjct: 244 IV--VAIIMIILNYTLTVVATRVEK 266 >gi|319778957|ref|YP_004129870.1| Glutamate Aspartate transport system permease protein GltK [Taylorella equigenitalis MCE9] gi|317108981|gb|ADU91727.1| Glutamate Aspartate transport system permease protein GltK [Taylorella equigenitalis MCE9] Length = 356 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 54/153 (35%), Positives = 87/153 (56%), Gaps = 9/153 (5%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 Y+ + RG P + LF+ +P G+ F+ + +++ + SAYI+E++R + SI Sbjct: 188 YIELVRGVPFVSLLFMASVMVPLFFPEGVTFNKLLRAQLAVIIYMSAYIAEVVRGGLQSI 247 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKGQ++ + ++GL+ Q +R IILPQ +T PL S FISI K TS+ I I ++ + Sbjct: 248 PKGQYEGAKSLGLSYWQYMRLIILPQALTVVIPPLVSIFISIFKDTSLVVIIGIYDLTLS 307 Query: 178 AQRIVST---TYQPLIIYCELAFVYLILTSFCY 207 A+ +S + L Y LAF+Y I FC+ Sbjct: 308 AKVALSDPQWSGLGLEAYVFLAFIYFI---FCF 337 >gi|302337869|ref|YP_003803075.1| polar amino acid ABC transporter inner membrane subunit [Spirochaeta smaragdinae DSM 11293] gi|301635054|gb|ADK80481.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 218 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 90/165 (54%), Gaps = 1/165 (0%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L A ++ L I +I LI+G IAV+R ++ I+S V I RG P L+ ++ Sbjct: 15 LGKAFLINLSFLPIVLLIGLILGSVIAVVR-YYKIRILSQFFSLLVEIIRGAPFLLLVYA 73 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 F+ LP+IGI F + L+ SA++SEI S + SI GQ+ A+ +IG+ Q + Sbjct: 74 TFFILPNIGISLSPFGTGVCVLSFTSSAFMSEIFLSGLRSIDTGQYFAADSIGMNFFQKM 133 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 II PQ I + + + I +K TS+ S + + E+ +T++++ Sbjct: 134 TLIIFPQMIKLTLPSIVGQVIMTIKDTSIVSLVGLAEVVRTSRQM 178 >gi|46190817|ref|ZP_00120960.2| COG0765: ABC-type amino acid transport system, permease component [Bifidobacterium longum DJO10A] Length = 249 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 105/191 (54%), Gaps = 14/191 (7%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR-----IFFSDTIISLIM 58 E+F + SFP +L + + + + ++ V I+ IA++R I F I++LI Sbjct: 27 EYF---VKSFPHVL-DGLWLNIRVLLVAVVGVAILSTLIALVRTSRSPILFPLRILALI- 81 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIV--FDSFVAIIISLTLNFSAYISEIIRSSIIS 116 Y + RG P++V L++I +G+P +G+ D V I++ + +SAY+SE++R+ Sbjct: 82 --YTTVMRGVPIIVVLYLIGFGIPGLGLFGRIDPSVLGTIAVVMGYSAYVSEVLRAGFND 139 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + Q ++ ++GLT QT R I++PQ + A L ++FIS+ K + S + + + Sbjct: 140 VHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQKDVGLISVLGAVDAVR 199 Query: 177 TAQRIVSTTYQ 187 AQ V++TY Sbjct: 200 AAQIDVASTYN 210 >gi|315181772|gb|ADT88685.1| arginine ABC transporter, permease protein [Vibrio furnissii NCTC 11218] Length = 141 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 70/123 (56%), Gaps = 1/123 (0%) Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 +++L LN +AY S++ + + +IP GQW A A+G+ + T+R ++LP + + S+ Sbjct: 14 MVALALNTAAYSSQLFKGAFNAIPDGQWQACRALGMNKIATLR-VLLPYALRRAVPAYSN 72 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 E I + K TS+ASTITI ++ AQRI + TY L ++ YL + ++ +IE Sbjct: 73 EVILVFKGTSLASTITIMDLMGYAQRINAQTYDTLTVFGVAGLFYLSVNGLLTLVFRQIE 132 Query: 215 SSV 217 Sbjct: 133 RKA 135 >gi|296158852|ref|ZP_06841681.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295891057|gb|EFG70846.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 312 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 60/232 (25%), Positives = 109/232 (46%), Gaps = 20/232 (8%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 +++W + F + + + TL + S + L G IA R+ + ++ + Y Sbjct: 73 RWQWDIVAHYLFNKRVLKGLGNTLVLTASSSALGLCFGVVIAACRMA-DNAVLRAAGYVY 131 Query: 62 VWIFRGTPLLVQLFV----------IFYGLPHI-GIVFD--------SFVAIIISLTLNF 102 +WI R TP L L + ++ LP + +FD F A +I L + Sbjct: 132 IWIIRATPPLAMLLLLFFLSALIPRLYLPLPFLHANLFDIDTNQIISRFSAAVIGLAMYL 191 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 Y +EI R + ++ +GQ +A AIG++ T+ H+++PQ + PL++E I++ K+ Sbjct: 192 GGYSAEIFRGGVSAVDRGQREACKAIGMSDFHTMWHVVMPQAVRIIIPPLANELITMFKN 251 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+ + I E+ T Q I +T ++ + + YL LTS Q +E Sbjct: 252 TSLVTVIGYVELLTTVQLIYATNFETIPLLTVACIWYLALTSLAMAAQSLLE 303 >gi|186477319|ref|YP_001858789.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phymatum STM815] gi|184193778|gb|ACC71743.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 225 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 57/187 (30%), Positives = 101/187 (54%), Gaps = 11/187 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++W I + P L AIV TL I ++ VI ++ G +A++R+ + YV Sbjct: 4 FDWSG-IPGALPTLWTGAIV-TLKITILAIVIGIVWGTVLALLRLS-GIKPLEWFAKLYV 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHI-----GIVFD---SFVAIIISLTLNFSAYISEIIRSSI 114 +FR PL++ L F +P + G+ D + +++ +L +AY SEIIR+ I Sbjct: 61 TLFRSIPLVMVLLWFFLIVPQVLQNVLGLSADIDIRLASAMVAFSLFEAAYYSEIIRAGI 120 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++P+GQ +ASYA+G++ Q +R ++LPQ L ++ I + + TS+ I++ + Sbjct: 121 QAVPRGQVNASYALGMSYPQAMRLVVLPQAFRAMVPLLLTQAIVLFQDTSLVYVISLADF 180 Query: 175 FQTAQRI 181 F+TA I Sbjct: 181 FRTATNI 187 >gi|28869818|ref|NP_792437.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28853063|gb|AAO56132.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] gi|331014463|gb|EGH94519.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 262 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 12/166 (7%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLP------HIGIVFDSFVAIIISLTLNFSAYI 106 ++ L +V +FR P LV ++ Y P I F +V + + L L SA + Sbjct: 86 LLRLPARLWVQVFRNAPWLVLIYFTTYVFPFEIKIAGTYIAFPDWVKVTLGLALPASANV 145 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +EI R ++ SIP QW+A+ ++ TR Q R IILPQ P + + I T++A Sbjct: 146 AEIFRGAVASIPSTQWEAARSLAFTRGQIFRSIILPQCFKRMLPPWMNLYAVITMGTALA 205 Query: 167 STITIPEIFQTAQRIVSTTYQ---PLIIYCELAFVYLILTSFCYII 209 S + + ++ TAQ +T Q ++IYC L ++ ++CY I Sbjct: 206 SLVGVHDVIDTAQIASNTVNQTGFTVVIYCSLLVLFF---AYCYPI 248 >gi|325963973|ref|YP_004241879.1| amino acid ABC transporter membrane protein, PAAT family [Arthrobacter phenanthrenivorans Sphe3] gi|323470060|gb|ADX73745.1| amino acid ABC transporter membrane protein, PAAT family [Arthrobacter phenanthrenivorans Sphe3] Length = 254 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 14/200 (7%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P LL + TL +A S ++ ++G +A++ I + + Y IFRG P ++ Sbjct: 22 PALLMVGLPNTLILAVASGILGSVLGLALAMMGIS-RNAGARWVARIYTDIFRGLPAILV 80 Query: 74 LFVIFYGLPHIGIVF----DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 + VI GL I + + I++LTL +AYI EI RS I S+ KGQ +AS A+G Sbjct: 81 ILVIGIGLSPIAREITGSRNPYPLGILALTLIAAAYIGEIFRSGIQSVEKGQLEASRALG 140 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP----EIFQTAQRIVSTT 185 + ++R +++PQ I L ++FIS+LK +S+ + + EIF+ ++ T Sbjct: 141 FSYGSSMRLVVVPQGIRRVLPALVNQFISLLKDSSLVFMLGLAASDREIFRIGNDAMANT 200 Query: 186 YQ--PLIIYCELAFVYLILT 203 PL+ +YLILT Sbjct: 201 GNLSPLVAA---GVLYLILT 217 >gi|262394186|ref|YP_003286040.1| amino acid ABC transporter permease [Vibrio sp. Ex25] gi|262337780|gb|ACY51575.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25] Length = 365 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 6/194 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + ++VTL IA + V+SL IG +A+ R II I Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVVLALGR-RSEMPIIRSICTVYIEVWRGVPLITVLFMA 213 Query: 78 FYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 LP G D + +I + + SAY++E++R + +IPKGQ++A+ A+GL+ + Sbjct: 214 SVMLPLFMSEGSETDKLIRALIGVVMFASAYMAEVVRGGLQAIPKGQYEAADALGLSYWK 273 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 IILPQ + + + + FI + K TS+ I + ++ Q +T L E Sbjct: 274 KTGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPDWLGFATE 332 Query: 195 -LAFVYLILTSFCY 207 FV L+ FC+ Sbjct: 333 SYVFVALVFWVFCF 346 >gi|307130767|ref|YP_003882783.1| arginine ABC transporter membrane protein [Dickeya dadantii 3937] gi|306528296|gb|ADM98226.1| arginine transporter subunit; membrane component of ABC superfamily [Dickeya dadantii 3937] Length = 238 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 105/201 (52%), Gaps = 22/201 (10%) Query: 28 ACISFVISLIIGF--FIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI- 84 AC + V++L+ G + V+ I+F + + L +L F + GL + Sbjct: 45 ACGTAVVTLLRGLPEILVVLFIYFGSSQLLL-------------MLSDGFTLHLGLTQVP 91 Query: 85 -GIVFDSF-----VAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 + D+F + +I+L+L ++AY S+ +R ++ ++P+GQW++ A+G+++ R Sbjct: 92 VKLAIDNFEVSPFLCGVIALSLLYAAYASQTLRGALKAVPRGQWESGQALGMSKSVIFRR 151 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 +I+PQ + L ++++ +LK T++ S I++ ++ + I + T +P Y A + Sbjct: 152 LIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYMIAAAI 211 Query: 199 YLILTSFCYIIQIKIESSVTQ 219 YL++T I +IE T+ Sbjct: 212 YLVITLLSQAILNRIEVRATR 232 >gi|289671692|ref|ZP_06492582.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. syringae FF5] Length = 237 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 107/211 (50%), Gaps = 10/211 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K++ ++ + +L+ I TL +A +++ +++ I + IR+ + L+ Y Sbjct: 8 KFDLSAILQGEYAELIVKGIETTLQLALVAWCLAMAIALLLVSIRLTGNKYAERLVAG-Y 66 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 V R P LVQL + ++G+P + ++ +I+L L +AY SE IRS Sbjct: 67 VSYHRNVPTLVQLMLWYFGIPTLLSESTQIWLANYSTEYLFSVIALGLCQAAYFSEDIRS 126 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +IP GQ +AS A+GL +++R++ILPQ + L + + + K+TS+ I + Sbjct: 127 GLRAIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVV 186 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+ + + + T++ Y VYL ++ Sbjct: 187 ELTYATREVENYTFRTFEAYLVATVVYLAIS 217 >gi|256825959|ref|YP_003149919.1| amino acid ABC transporter membrane protein [Kytococcus sedentarius DSM 20547] gi|256689352|gb|ACV07154.1| amino acid ABC transporter membrane protein [Kytococcus sedentarius DSM 20547] Length = 215 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 99/188 (52%), Gaps = 8/188 (4%) Query: 1 MKYEWFNLI-IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAV-IRIFFSDTIISLIM 58 M W N + +++ P +L A + VTL + I +++ ++G AV +R ++ + Sbjct: 1 MNELWDNEVALEALPVMLEAFVKVTLVVTVIGSLVAAVLGLVWAVSLREL--PAVVGKPL 58 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 + + + R TPL +QL +++ + V I+ + +++S Y++E R+ I S+P Sbjct: 59 GWALDVVRMTPLPLQLLFVYFTFNQL----SGMVVGIVVMGIHYSTYMAESYRAGIESVP 114 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQW+A+ A+ L ++T +I+PQ + + L I++ K T I +PE+ A Sbjct: 115 RGQWEAATALSLPARRTWTDLIIPQALRNTLPSLGGWAIAMFKDTPFLIVIGVPEMVTAA 174 Query: 179 QRIVSTTY 186 QR+ + + Sbjct: 175 QRVGAQNF 182 >gi|152986120|ref|YP_001349969.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa PA7] gi|150961278|gb|ABR83303.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa PA7] Length = 229 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 80/153 (52%), Gaps = 12/153 (7%) Query: 59 HFYVWIFRGTPLLVQLFVIFYG--------LPHIG----IVFDSFVAIIISLTLNFSAYI 106 Y + RG P LV + +IFYG P G I + FV+ + +L F AY+ Sbjct: 50 DLYATVVRGIPDLVLILLIFYGGQALLNWVAPQFGYDDYIDLNPFVSGVGTLGFIFGAYL 109 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 SE R + ++IPKGQ +A YA G++ +Q + +PQ I + ++ ++ ++K+T++ Sbjct: 110 SETFRGAFMAIPKGQGEAGYAYGMSHRQVFFRVQVPQMIRLAIPGFTNNWLVLVKATALI 169 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 S + + ++ A++ T +P Y +A +Y Sbjct: 170 SVVGLQDMMFKAKQASDATREPFTYYLAVAGLY 202 >gi|269796734|ref|YP_003316189.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii DSM 10542] gi|269098919|gb|ACZ23355.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii DSM 10542] Length = 374 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 109/200 (54%), Gaps = 29/200 (14%) Query: 1 MKYEW---FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLI 57 ++EW F + ++P +L + + TL + ++ VI +G +A++R+ S ++ + Sbjct: 74 QRWEWSIVFQYL--TWPSIL-SGLWGTLRLTFVAAVIGFGLGTVLALMRLSRSP-LLRAV 129 Query: 58 MHFYVWIFRGTPLLVQLFVIFYGLPHI------GIVF-------------DSFVAIIISL 98 Y W+FR PL++QL ++Y L ++ GI F + F A I+ L Sbjct: 130 SWAYTWVFRSVPLILQLL-LWYNLAYLYPTLSLGIPFGPSFAEFGTLDVINKFGAAILGL 188 Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS-SEFI 157 L+ +AY +EI+R+ I+S+ +GQ +A+ A+G+ R + I+LPQ + T VP S +E I Sbjct: 189 GLSQAAYSAEIVRAGILSVDQGQHEAAAALGIPRARQSTRIVLPQAMRT-IVPTSVNEII 247 Query: 158 SILKSTSVASTITIPEIFQT 177 ++K TSV + E+F T Sbjct: 248 GLVKGTSVVYVLAYGELFYT 267 >gi|70731862|ref|YP_261604.1| arginine/ornithine ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68346161|gb|AAY93767.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 229 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 53/215 (24%), Positives = 106/215 (49%), Gaps = 13/215 (6%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG-- 80 +TL +A S +++++G +R+ ++ + Y + RG P LV + +IFYG Sbjct: 15 LTLQLALSSMALAIVLGLIGVALRLS-PVRWLAWLGDLYSTVIRGIPDLVLILLIFYGGQ 73 Query: 81 ------LPHIG----IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 P +G I + A I +L F AY+SE R + ++IPKGQ +A A G+ Sbjct: 74 DLLNRVAPLLGYDDYIDLNPLAAGIGTLGFIFGAYLSETFRGAFMAIPKGQAEAGMAYGM 133 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 + Q +++PQ I + ++ ++ + K+T++ S + + ++ A++ T +P Sbjct: 134 SSFQVFFRVMVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATREPFT 193 Query: 191 IYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + +A +YL++TS + +E + + D Sbjct: 194 FFLAVAAMYLVITSVSLLALRYLEKRYSVGVRAAD 228 >gi|227546292|ref|ZP_03976341.1| amino acid ABC superfamily ATP binding cassette transporter permease protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|317483334|ref|ZP_07942327.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bifidobacterium sp. 12_1_47BFAA] gi|227213273|gb|EEI81145.1| amino acid ABC superfamily ATP binding cassette transporter permease protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|316915216|gb|EFV36645.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bifidobacterium sp. 12_1_47BFAA] Length = 295 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 105/191 (54%), Gaps = 14/191 (7%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR-----IFFSDTIISLIM 58 E+F + SFP +L + + + + ++ V I+ IA++R I F I++LI Sbjct: 73 EYF---VKSFPHVL-DGLWLNIRVLLVAVVGVAILSTLIALVRTSRSPILFPLRILALI- 127 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGI--VFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 Y + RG P++V L++I +G+P +G+ D V I++ + +SAY+SE++R+ Sbjct: 128 --YTTVMRGVPIIVVLYLIGFGIPGLGLFGRIDPSVLGTIAVVMGYSAYVSEVLRAGFND 185 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + Q ++ ++GLT QT R I++PQ + A L ++FIS+ K + S + + + Sbjct: 186 VHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQKDVGLISVLGAVDAVR 245 Query: 177 TAQRIVSTTYQ 187 AQ V++TY Sbjct: 246 AAQIDVASTYN 256 >gi|213966879|ref|ZP_03395029.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301381562|ref|ZP_07229980.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302061682|ref|ZP_07253223.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302131521|ref|ZP_07257511.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928201|gb|EEB61746.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 246 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 87/149 (58%), Gaps = 5/149 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V++ RG PLL+ +F ++ +P IG F ++ +L + SAY+ EIIR +I ++P Sbjct: 67 WVYVMRGIPLLMVIFWTYFLVPLLIGHNITGFTTMLCTLVVYQSAYLCEIIRGAIQALPT 126 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++AS A+G+ +T +ILPQ + + L S+FISI+K TS+ I + E+ A Sbjct: 127 GQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINVQEVTFAAN 186 Query: 180 RIVSTTY-QPLIIYCELAFVYLILTSFCY 207 +I + +P ++ LA Y +L CY Sbjct: 187 QINNQLLTKPFQVFFILAITYYVL---CY 212 >gi|89901104|ref|YP_523575.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89345841|gb|ABD70044.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 367 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 113/216 (52%), Gaps = 19/216 (8%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + + +T+ +A +S V+S I +A+ R I S YV + RG PL+ LF+ Sbjct: 156 WGGLPLTILLASLSLVMSFPIALLVALGRRSSLPAIRSFC-TIYVELIRGVPLISVLFMA 214 Query: 78 FYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 + P G D + +++ +TL +AY +E+IR + +IPKGQ +A+ +GL+ Q Sbjct: 215 SFMFPLFMPQGFKIDVLIRVLVGITLFAAAYSAEVIRGGLQAIPKGQVEAAATLGLSYWQ 274 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS--TTYQPLII- 191 T R I+LPQ + + + FIS K TS+ + +++ E+ ++ + ++P I Sbjct: 275 TQRKIVLPQALAMVVPGIMNNFISTFKDTSLVTIVSLYELTGAMSLALNSDSNWRPFTIE 334 Query: 192 -YCELAFVYLILTSFCYIIQIKIESSVTQHTYSVDK 226 Y +A +Y + FC+ S++++++ V+K Sbjct: 335 GYIFIALIYFV---FCF--------SMSRYSHWVEK 359 >gi|327461007|gb|EGF07340.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1057] Length = 226 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 44/124 (35%), Positives = 75/124 (60%), Gaps = 3/124 (2%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYI 106 ++ + +V ++ TPLLVQ ++FYGLP + I+ + ++ + L AYI Sbjct: 50 KHKVLRGLARVFVEFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYI 109 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 SE+IRS I SIP+GQ +A+ + G T +T+R+IILPQ PL ++ ++++K+TS Sbjct: 110 SEVIRSGIQSIPRGQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTV 169 Query: 167 STIT 170 + I+ Sbjct: 170 AIIS 173 >gi|298290178|ref|YP_003692117.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296926689|gb|ADH87498.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 220 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 89/158 (56%), Gaps = 8/158 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGT 68 + P +L+ A+V TL IA V+S+++G F AV+ S + + + +V + R T Sbjct: 13 ALPDMLWGALV-TLEIA----VLSMLLGVFFAVLLAVASGSQYRALRALASTWVELARNT 67 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 P L Q+++ ++GL +GI DSF A++ +T N + Y++E R + ++P Q A+ ++ Sbjct: 68 PALFQIYMAYFGLGSLGIHLDSFPALLAGITFNNAGYLAETFRGGLRAVPPTQVRAARSL 127 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 G+ + Q R I++PQ P++++ + + TS+ Sbjct: 128 GMGQIQAFRLIVMPQMFRVVFYPMTNQMVWAILMTSLG 165 >gi|262274331|ref|ZP_06052142.1| amino acid ABC transporter permease protein [Grimontia hollisae CIP 101886] gi|262220894|gb|EEY72208.1| amino acid ABC transporter permease protein [Grimontia hollisae CIP 101886] Length = 366 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 106/200 (53%), Gaps = 16/200 (8%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLF 75 L+ +++T+ IA + V+SL IG +A+ R SD II + Y+ ++RG PL+ LF Sbjct: 155 LWGGLLITMIIAIVGIVVSLPIGIVLALGRR--SDMPIIRSLSTVYIEVWRGVPLITVLF 212 Query: 76 VIFYGLPHIGIVF-------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 + LP +F + V +I + + SAY++E++R + +IPKGQ++A+ A+ Sbjct: 213 MASVMLP----LFMSGESESNKLVRALIGVVMFASAYMAEVVRGGLQAIPKGQYEAADAL 268 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 GLT + + IILPQ + S + + FI + K TS+ I + ++ Q +T Sbjct: 269 GLTYWKKMNLIILPQALKISIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPNW 327 Query: 189 LIIYCE-LAFVYLILTSFCY 207 L E FV L+ FC+ Sbjct: 328 LGFATESYVFVALVFWIFCF 347 >gi|254500334|ref|ZP_05112485.1| ABC transporter, permease protein, putative [Labrenzia alexandrii DFL-11] gi|222436405|gb|EEE43084.1| ABC transporter, permease protein, putative [Labrenzia alexandrii DFL-11] Length = 226 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 85/152 (55%), Gaps = 1/152 (0%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIR 111 I++ I YV R TPL+VQ+F + +GLP + G + + +++L+LNFSAY +EI+R Sbjct: 54 ILAPIATIYVEFIRNTPLIVQMFFVAFGLPLLLGYQWPFWAHALLALSLNFSAYFAEILR 113 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + + I GQ +A+ A+GL I+ PQ + L+S+FI + +T V S I + Sbjct: 114 AGLAGIGTGQSEAAAALGLPTWLGFSKILFPQAVAAMFPSLNSQFIFLFLTTGVISEIGV 173 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ I S +++ ++ L +Y+++ Sbjct: 174 TDLTWAGLYIDSRSFRSFEVFFTLTVIYVLMA 205 >gi|213692816|ref|YP_002323402.1| polar amino acid ABC transporter, inner membrane subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524277|gb|ACJ53024.1| polar amino acid ABC transporter, inner membrane subunit [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 295 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 105/191 (54%), Gaps = 14/191 (7%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR-----IFFSDTIISLIM 58 E+F + SFP +L + + + + ++ V I+ IA++R I F I++LI Sbjct: 73 EYF---VKSFPHVL-DGLWLNIRVLLVAVVGVAILSTLIALVRTSRSPILFPLRILALI- 127 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGI--VFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 Y + RG P++V L++I +G+P +G+ D V I++ + +SAY+SE++R+ Sbjct: 128 --YTTVMRGVPIIVVLYLIGFGIPGLGLFGRIDPSVLGTIAVVMGYSAYVSEVLRAGFND 185 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + Q ++ ++GLT QT R I++PQ + A L ++FIS+ K + S + + + Sbjct: 186 VHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQKDVGLISVLGAVDAVR 245 Query: 177 TAQRIVSTTYQ 187 AQ V++TY Sbjct: 246 AAQIDVASTYN 256 >gi|2668596|gb|AAC71071.1| membrane protein [Pseudomonas aeruginosa PAO1] Length = 229 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 80/153 (52%), Gaps = 12/153 (7%) Query: 59 HFYVWIFRGTPLLVQLFVIFYG--------LPHIG----IVFDSFVAIIISLTLNFSAYI 106 Y + RG P LV + +IFYG P +G I + FV+ + +L F AY+ Sbjct: 50 DLYATVVRGIPDLVLILLIFYGGQGLLNWVAPQLGYDDYIDLNPFVSGVGTLGFIFGAYL 109 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 SE R + ++IPKGQ +A Y G++ +Q I +PQ I + ++ ++ ++K+T++ Sbjct: 110 SETFRGAFMAIPKGQGEAGYGYGMSHRQVFFRIQVPQMIRLAIPGFTNNWLVLVKATALI 169 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 S + + ++ A++ T +P Y +A +Y Sbjct: 170 SVVGLQDMMFKAKQASDATREPFTYYLAVAGLY 202 >gi|288959823|ref|YP_003450163.1| hypothetical protein AZL_a00880 [Azospirillum sp. B510] gi|288912131|dbj|BAI73619.1| hypothetical protein AZL_a00880 [Azospirillum sp. B510] Length = 263 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 6/124 (4%) Query: 61 YVWIFRGTPLLVQLFVIFYGLP---HIG---IVFDSFVAIIISLTLNFSAYISEIIRSSI 114 YV IFR P LV +F Y LP IG + F ++ ++ L + SA+I+EI R +I Sbjct: 96 YVQIFRNAPHLVLIFATTYALPFEIAIGGWHVPFPDWLKAVVGLAVPASAHIAEIARGAI 155 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 SIP QW+A+ ++G R QT+R IILPQ + S + + SI +++AS + + E+ Sbjct: 156 QSIPAAQWEAAGSLGFGRLQTLRWIILPQGLRRSLPAWMNLYASIAMGSALASLVGVGEL 215 Query: 175 FQTA 178 A Sbjct: 216 LHAA 219 >gi|167035541|ref|YP_001670772.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166862029|gb|ABZ00437.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 365 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 106/203 (52%), Gaps = 4/203 (1%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L +DS P + +++TL IA + V +L +G +A+ R + + + F + +RG Sbjct: 145 LGLDSVPTSQWGGLMLTLVIATVGIVGALPLGILLALGRRSRMPAVKVVCVTF-IEFWRG 203 Query: 68 TPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 PL+ LF+ LP G+ FD + +I + L SAYI+E++R + +IPKGQ++A Sbjct: 204 VPLITVLFMSSVMLPLFLPEGMSFDKLLRAMIGVILFQSAYIAEVVRGGLQAIPKGQYEA 263 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+GL +++ +ILPQ + + + FI++ K TS+ I + ++ + ++ + Sbjct: 264 AAAMGLGYWRSMGLVILPQALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQAAAD 323 Query: 185 TYQPLIIYCELAFVYLILTSFCY 207 + F L+ FC+ Sbjct: 324 PAWLGMATEGYVFAALVFWVFCF 346 >gi|22127991|ref|NP_671414.1| amino acid ABC transport system permease [Yersinia pestis KIM 10] gi|21961137|gb|AAM87665.1|AE014013_10 putative amino acid ABC transport system permease [Yersinia pestis KIM 10] Length = 269 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 106/201 (52%), Gaps = 3/201 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ +FP +T+ I+ ++ V S ++G + V + S + + I+ + Sbjct: 27 NWRYLLWGTFPDGPLGGAALTVVISIMAGVASAVLGTVLGV-ALAMSRGVWAGILAAVLG 85 Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +FR P+++ +F ++ LP + G+ ++ +L L SAY++ +++ I++I GQW Sbjct: 86 LFRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIMAIGAGQW 145 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRI 181 A ++G R QT+ I+LPQ + +++IS++K TS+A + + E+ F Q Sbjct: 146 QAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQVN 205 Query: 182 VSTTYQPLIIYCELAFVYLIL 202 + P+ ++ +A VY +L Sbjct: 206 NRSMVYPMEVFLFVALVYFVL 226 >gi|330970134|gb|EGH70200.1| glutamine ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 233 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 107/211 (50%), Gaps = 10/211 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K++ ++ + +L+ I TL +A +++ +++ I + IR+ + L+ Y Sbjct: 4 KFDLSAILQGEYAELIVKGIETTLQLALVAWCLAMAIALLLVSIRLTGNKYAERLVAG-Y 62 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 V R P LVQL + ++G+P + ++ +I+L L +AY SE IRS Sbjct: 63 VSYHRNVPTLVQLMLWYFGIPTLLSESTQIWLANYSTEYLFSVIALGLCQAAYFSEDIRS 122 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +IP GQ +AS A+GL +++R++ILPQ + L + + + K+TS+ I + Sbjct: 123 GLRAIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVV 182 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+ + + + T++ Y VYL ++ Sbjct: 183 ELTYATREVENYTFRTFEAYLVATVVYLAIS 213 >gi|302337441|ref|YP_003802647.1| polar amino acid ABC transporter inner membrane subunit [Spirochaeta smaragdinae DSM 11293] gi|301634626|gb|ADK80053.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 212 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 55/191 (28%), Positives = 101/191 (52%), Gaps = 5/191 (2%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDS 90 S ISL++G I ++ + II I+ Y+ RG P L L ++F+ G Sbjct: 25 SVAISLVLGIIIGILG-YLQIPIIRYIVSAYIIAMRGLPPLTLLLLVFFS----GSFVSP 79 Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 V I+ L++ AYI+EI+R+ I +IPKGQ + + +IGL+ + H+I+PQ + Sbjct: 80 IVTAIVVLSVYHGAYIAEIVRAGISAIPKGQHEGADSIGLSVIAKMVHVIMPQVWLSIIP 139 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 L ++I ++K T++ S I + E+ A++I+ Y+P+ +Y +A + ++ F + Sbjct: 140 SLVGQYIILIKDTTLISAIGVMELLNNARQIMQVVYRPITVYVIVAVFFFVICFFLENLS 199 Query: 211 IKIESSVTQHT 221 +E + T Sbjct: 200 KHLERRIKAKT 210 >gi|182419551|ref|ZP_02950799.1| amino acid ABC transporter, permease protein [Clostridium butyricum 5521] gi|182376586|gb|EDT74161.1| amino acid ABC transporter, permease protein [Clostridium butyricum 5521] Length = 210 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 60/192 (31%), Positives = 104/192 (54%), Gaps = 13/192 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + +TL IA IS +S+I G +AV+R +S I + Y+ IFR TP L+ + Sbjct: 13 LLQGLKLTLTIAVISIFLSMIFGTILAVLR-NYSKGIFGKLAAIYIEIFRNTPSLLWILS 71 Query: 77 IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 I + +P + I+S TL +A I+EI+R + S+ GQ++ASY+ G ++ QT+ Sbjct: 72 IRFLIP-----IKPMYSGILSFTLFTTAAIAEIVRGGMNSVNAGQYEASYSQGFSKIQTL 126 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV-----STTYQPLII 191 R+IILPQ+ + S+ +++K TS + I E T + ++ +T+ Q ++ Sbjct: 127 RYIILPQSFKNCIPTILSQSSTVIKDTSYLWAVGIEEF--TGKGMILMGSFATSTQVFLL 184 Query: 192 YCELAFVYLILT 203 + +A Y I+ Sbjct: 185 FGTIAASYFIIN 196 >gi|320458985|dbj|BAJ69606.1| amino acid ABC transporter permease component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 311 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 105/191 (54%), Gaps = 14/191 (7%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR-----IFFSDTIISLIM 58 E+F + SFP +L + + + + ++ V I+ IA++R I F I++LI Sbjct: 89 EYF---VKSFPHVL-DGLWLNIRVLLVAVVGVAILSTLIALVRTSRSPILFPLRILALI- 143 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGI--VFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 Y + RG P++V L++I +G+P +G+ D V I++ + +SAY+SE++R+ Sbjct: 144 --YTTVMRGVPIIVVLYLIGFGIPGLGLFGRIDPSVLGTIAVVMGYSAYVSEVLRAGFND 201 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + Q ++ ++GLT QT R I++PQ + A L ++FIS+ K + S + + + Sbjct: 202 VHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQKDVGLISVLGAVDAVR 261 Query: 177 TAQRIVSTTYQ 187 AQ V++TY Sbjct: 262 AAQIDVASTYN 272 >gi|23465687|ref|NP_696290.1| amino acid ABC transporter permease [Bifidobacterium longum NCC2705] gi|23326365|gb|AAN24926.1| probable permease protein for ABC transporter system for amino-acids [Bifidobacterium longum NCC2705] Length = 320 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 105/191 (54%), Gaps = 14/191 (7%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR-----IFFSDTIISLIM 58 E+F + SFP +L + + + + ++ V I+ IA++R I F I++LI Sbjct: 98 EYF---VKSFPHVL-DGLWLNIRVLLVAVVGVAILSTLIALVRTSRSPILFPLRILALI- 152 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGI--VFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 Y + RG P++V L++I +G+P +G+ D V I++ + +SAY+SE++R+ Sbjct: 153 --YTTVMRGVPIIVVLYLIGFGIPGLGLFGRIDPSVLGTIAVVMGYSAYVSEVLRAGFND 210 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + Q ++ ++GLT QT R I++PQ + A L ++FIS+ K + S + + + Sbjct: 211 VHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQKDVGLISVLGAVDAVR 270 Query: 177 TAQRIVSTTYQ 187 AQ V++TY Sbjct: 271 AAQIDVASTYN 281 >gi|320159033|ref|YP_004191411.1| arginine ABC transporterpermease ArtQ [Vibrio vulnificus MO6-24/O] gi|319934345|gb|ADV89208.1| arginine ABC transporter, permease protein ArtQ [Vibrio vulnificus MO6-24/O] Length = 229 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 102/181 (56%), Gaps = 10/181 (5%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIM---HFYVWIFRGTPLLVQLFVIFYGLPHI----- 84 ++SL +G +AV+ T L+ V + RG P L+ + I++G + Sbjct: 22 LVSLAVGLVLAVVFAGGEMTRHRLVKWPTTALVTVLRGLPELLVVLFIYFGSTQVLFLLT 81 Query: 85 G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 G I F++ +I+L+L F++Y S+ IR ++ ++ KGQ +A+ A+G+++ +T I+LP Sbjct: 82 GDFIEVSPFLSGVIALSLIFASYASQTIRGALKAVNKGQREAASALGMSKSRTFFRIVLP 141 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + + L+++++ +LK T++ S I + ++ + AQ + T++ Y A +YL++ Sbjct: 142 QAVRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVI 201 Query: 203 T 203 T Sbjct: 202 T 202 >gi|331015348|gb|EGH95404.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 247 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 87/149 (58%), Gaps = 5/149 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V++ RG PLL+ +F ++ +P IG F ++ +L + SAY+ EIIR +I ++P Sbjct: 67 WVYVMRGIPLLMVIFWTYFLVPLLIGHNITGFTTMLCTLVVYQSAYLCEIIRGAIQALPT 126 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++AS A+G+ +T +ILPQ + + L S+FISI+K TS+ I + E+ A Sbjct: 127 GQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINVQEVTFAAN 186 Query: 180 RIVSTTY-QPLIIYCELAFVYLILTSFCY 207 +I + +P ++ LA Y +L CY Sbjct: 187 QINNQLLTKPFQVFFILAITYYVL---CY 212 >gi|330970135|gb|EGH70201.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 246 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 87/149 (58%), Gaps = 5/149 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V++ RG PLL+ +F ++ +P IG F ++ +L + SAY+ EIIR +I ++P Sbjct: 67 WVYVMRGIPLLMVIFWTYFLVPLLIGHNITGFTTMLCTLVVYQSAYLCEIIRGAIQALPT 126 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++AS A+G+ +T +ILPQ + + L S+FISI+K TS+ I + E+ A Sbjct: 127 GQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINVQEVTFAAN 186 Query: 180 RIVSTTY-QPLIIYCELAFVYLILTSFCY 207 +I + +P ++ LA Y +L CY Sbjct: 187 QINNQLLTKPFQVFFILAITYYVL---CY 212 >gi|311104486|ref|YP_003977339.1| arginine/ornithine transporter AotM [Achromobacter xylosoxidans A8] gi|310759175|gb|ADP14624.1| arginine/ornithine transport protein AotM [Achromobacter xylosoxidans A8] Length = 229 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 22/213 (10%) Query: 6 FNLIIDSFPQLLYAA---IVVTLPIACISFVISLIIGFFIAVIRIF--FSDTIISLIMHF 60 F + DS P+LL A V LP+ L+IG +A+ F +L Sbjct: 5 FQVAWDSLPKLLAGAGTTFAVLLPV--------LVIGLLLALPVALASFRPGPRALFASS 56 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIR 111 Y+ FRG P LV L++I+ GLP IV D+F V + L L S +++EIIR Sbjct: 57 YIGFFRGVPSLVLLYLIYSGLPQFSIVRDTFLWNVFSNAYVCAWLGLALTHSGFMAEIIR 116 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + +IPKG +A+ +GL Q + + +P +E + ++KST+ S IT+ Sbjct: 117 GGLAAIPKGTIEAAQTLGLKPAQILFRLRIPLVARYVLRAYQNELLIMVKSTAAVSAITL 176 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 ++ A + TY P A +Y +T+ Sbjct: 177 VDLTAAANTVFDYTYDPFTPLITAAAIYWCITN 209 >gi|220920916|ref|YP_002496217.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium nodulans ORS 2060] gi|219945522|gb|ACL55914.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 232 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 95/179 (53%), Gaps = 10/179 (5%) Query: 34 ISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYG----LPH-----I 84 I+ IG +AV+R+ + + + YV R P+LV + ++G LP + Sbjct: 36 IAFGIGTLLAVVRVA-GNRWVEWAIAAYVEFQRNVPMLVHILFWYFGVAALLPDAIADWV 94 Query: 85 GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQT 144 F+ I++ L +AYISE +RS + +IPKGQ++AS ++G +T+R I+LPQ Sbjct: 95 NDHNSEFLFAAIAIGLCMAAYISEDLRSGLRAIPKGQYEASQSLGFGYAETMRVIVLPQA 154 Query: 145 ITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + S L ++ + + K+TS+A I + E+ + I S T++ + +YLIL+ Sbjct: 155 MRVSLPALVNQTLLLFKNTSLAMAIGVAELTYRTREIESATFRTFEAFAIATALYLILS 213 >gi|34496309|ref|NP_900524.1| histidine transport system membrane protein M [Chromobacterium violaceum ATCC 12472] gi|34102162|gb|AAQ58529.1| histidine transport system membrane protein M [Chromobacterium violaceum ATCC 12472] Length = 237 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 11/195 (5%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 + + VT+ + +S ++ +AV R+ ++ + Y ++FRGTPL VQL + Sbjct: 21 SGLAVTMWLLVLSIAFGFVVSIPLAVARVS-KVKWLARAVWLYTYVFRGTPLYVQLIFFY 79 Query: 79 YGLPHIGIVFD----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 G+ + +V + + I++ LN AY +EI +I + P G+ +A A Sbjct: 80 SGMYSLEVVREVGFLNHFFREGYNCTILAFALNTCAYTTEIFAGAIKATPYGEIEAGRAY 139 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G++ R +I+P + + S+E I +L +T+VA T T+P+I + A+ + + TY Sbjct: 140 GMSPFTLYRRVIIPSALRRALPAYSNEVILMLHATTVAFTATVPDILKVARDVNAATYDS 199 Query: 189 LIIYCELAFVYLILT 203 + A +YL +T Sbjct: 200 FNAFGLAALLYLSIT 214 >gi|270488378|ref|ZP_06205452.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|270336882|gb|EFA47659.1| ABC transporter, permease protein [Yersinia pestis KIM D27] Length = 251 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 106/201 (52%), Gaps = 3/201 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ +FP +T+ I+ ++ V S ++G + V + S + + I+ + Sbjct: 9 NWRYLLWGTFPDGPLGGAALTVVISIMAGVASAVLGTVLGV-ALAMSRGVWAGILAAVLG 67 Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 +FR P+++ +F ++ LP + G+ ++ +L L SAY++ +++ I++I GQW Sbjct: 68 LFRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIMAIGAGQW 127 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRI 181 A ++G R QT+ I+LPQ + +++IS++K TS+A + + E+ F Q Sbjct: 128 QAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQVN 187 Query: 182 VSTTYQPLIIYCELAFVYLIL 202 + P+ ++ +A VY +L Sbjct: 188 NRSMVYPMEVFLFVALVYFVL 208 >gi|167043235|gb|ABZ07942.1| putative binding-protein-dependent transport system inner membrane component [uncultured marine microorganism HF4000_ANIW141L21] Length = 774 Score = 78.6 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 27/169 (15%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIG--------------------IVFDSF------VAI 94 Y IFR TPLLVQ I +GL +G + D F ++ Sbjct: 582 YTDIFRNTPLLVQFLFIHFGL-QLGKLVQGPAEAMLAGSTSFLAEFIIDEFLSDRAYISA 640 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 I +L LN AY E IR +I +IP GQ +A +IGL QT+R +I+PQ I P+ + Sbjct: 641 IFALGLNSGAYQCETIRGAIAAIPSGQMEAGRSIGLNYMQTMRRVIMPQAIRICIPPMGN 700 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E ++++ ++S+A I E+ + + ++ T+Q + + Y I+T Sbjct: 701 EMVNLVLNSSLAMVIGYAELTRKGKLAIAITWQVFWGWGMVLISYFIVT 749 >gi|189439739|ref|YP_001954820.1| amino acid ABC transporter permease [Bifidobacterium longum DJO10A] gi|239622295|ref|ZP_04665326.1| polar amino acid ABC transporter [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312133132|ref|YP_004000471.1| hism5 [Bifidobacterium longum subsp. longum BBMN68] gi|322688698|ref|YP_004208432.1| amino acid ABC transporter permease [Bifidobacterium longum subsp. infantis 157F] gi|322690684|ref|YP_004220254.1| amino acid ABC transporter permease [Bifidobacterium longum subsp. longum JCM 1217] gi|189428174|gb|ACD98322.1| ABC-type amino acid transport system permease component [Bifidobacterium longum DJO10A] gi|239514292|gb|EEQ54159.1| polar amino acid ABC transporter [Bifidobacterium longum subsp. infantis CCUG 52486] gi|311774131|gb|ADQ03619.1| HisM5 [Bifidobacterium longum subsp. longum BBMN68] gi|320455540|dbj|BAJ66162.1| amino acid ABC transporter permease component [Bifidobacterium longum subsp. longum JCM 1217] gi|320460034|dbj|BAJ70654.1| amino acid ABC transporter permease component [Bifidobacterium longum subsp. infantis 157F] Length = 311 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 105/191 (54%), Gaps = 14/191 (7%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR-----IFFSDTIISLIM 58 E+F + SFP +L + + + + ++ V I+ IA++R I F I++LI Sbjct: 89 EYF---VKSFPHVL-DGLWLNIRVLLVAVVGVAILSTLIALVRTSRSPILFPLRILALI- 143 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLPHIGI--VFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 Y + RG P++V L++I +G+P +G+ D V I++ + +SAY+SE++R+ Sbjct: 144 --YTTVMRGVPIIVVLYLIGFGIPGLGLFGRIDPSVLGTIAVVMGYSAYVSEVLRAGFND 201 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + Q ++ ++GLT QT R I++PQ + A L ++FIS+ K + S + + + Sbjct: 202 VHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQKDVGLISVLGAVDAVR 261 Query: 177 TAQRIVSTTYQ 187 AQ V++TY Sbjct: 262 AAQIDVASTYN 272 >gi|261252932|ref|ZP_05945505.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP 102891] gi|260936323|gb|EEX92312.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP 102891] Length = 365 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 103/194 (53%), Gaps = 6/194 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + ++VTL IA + V+SL IG +A+ R II + Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVALALGRRS-EMPIIRSMCTVYIEVWRGVPLITVLFMA 213 Query: 78 FYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 LP G D + ++ + + +AY++E++R + +IPKGQ++A+ A+GLT + Sbjct: 214 SVMLPLFLAEGSETDKLIRALVGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLTYWK 273 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + IILPQ + + + + FI + K TS+ I + ++ Q +T + L E Sbjct: 274 KMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPEWLGFATE 332 Query: 195 -LAFVYLILTSFCY 207 FV L+ FC+ Sbjct: 333 SYVFVALVFWVFCF 346 >gi|302537323|ref|ZP_07289665.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. C] gi|302446218|gb|EFL18034.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. C] Length = 296 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 113/230 (49%), Gaps = 24/230 (10%) Query: 4 EWFNLIIDS--FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHF 60 +W + D + L ++ TL I+ VI+L +G + + R+ SD + + + Sbjct: 49 KWTPFVTDGRIWSTYLIPGLLETLKAGAIAMVIALPLGALLGMGRL--SDHAWVRVPVGV 106 Query: 61 YVWIFRGTPLLVQL------FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 V FR P+L+ + FV F +P + F A++ L L ++ I+EI+R+ + Sbjct: 107 VVEFFRAIPVLMLMMFGYAFFVRF--IPAVSSDFRPVYAVVTGLVLYNASVIAEIVRAGV 164 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+P+GQ DA+ AIG+ + QT+ H+++PQ +T L S+ + ILK T++ ++ Sbjct: 165 QSLPRGQTDAAKAIGMRKGQTMVHVLIPQAVTAMLPALVSQLVVILKDTALGGSLLGLTD 224 Query: 175 FQTAQRIVSTTYQPLI--------IYCELAFVYLILTSFCYIIQIKIESS 216 A R +S Y I IY + F LTSF ++ ++ S Sbjct: 225 LLAANRQISANYSNTIATLVVVALIYIAVNFA---LTSFASWMEGRLRKS 271 >gi|271964435|ref|YP_003338631.1| amino acid ABC transporter permease [Streptosporangium roseum DSM 43021] gi|270507610|gb|ACZ85888.1| amino acid ABC transporter, permease protein [Streptosporangium roseum DSM 43021] Length = 332 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 57/233 (24%), Positives = 118/233 (50%), Gaps = 25/233 (10%) Query: 3 YEWFNLIIDSF---PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 +EW ++ F P +L + +V TL + + ++G +A++R+ ++ ++S + Sbjct: 96 WEWE--VVGEFLFAPSVLRS-VVFTLELTALGIGFGFLLGTVLALMRMS-ANPLLSSVAW 151 Query: 60 FYVWIFRGTPLLVQLFVIF----------YGLPHIGIVFD--------SFVAIIISLTLN 101 Y+ +FR PL++QL + +G+P FD A + L L+ Sbjct: 152 GYIALFRSIPLILQLLFWYNLALLYPRLSFGVPFGPSFFDIGTMDLIGPVTAAALGLALH 211 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 +AY +EI+R+ ++S+ GQ +A+ A+G+ R + + I+LPQ + + +E I ++K Sbjct: 212 QAAYAAEIVRAGLLSVDHGQREAAAALGIPRSRQLFRIVLPQAMRSIVPTAGNEIIGLVK 271 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 TS+ + +PE+F Q I + + + + YL++T+ ++Q +E Sbjct: 272 GTSMVYIMALPELFYQVQVIYNRNGRVIALLLVATIWYLVMTTVLSVVQHYLE 324 >gi|308071224|ref|YP_003872829.1| amino acid ABC transporter permease [Paenibacillus polymyxa E681] gi|305860503|gb|ADM72291.1| ABC-type amino acid transport system, permease component [Paenibacillus polymyxa E681] Length = 225 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 100/177 (56%), Gaps = 9/177 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +LL ++VTL IA +S +I ++G + ++R S I ++ Y+ FR P+ Sbjct: 13 SNFERLL-GGLLVTLEIALLSIIIGTLLGILMGLLRTLKSRPI-RFVLKLYLETFRIIPI 70 Query: 71 LVQLFVIFYGL-PHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LV L+V+++G P + + + II +L +A I +I+R ++ S+PK Q ++ A+G Sbjct: 71 LVWLYVVYFGFTPLLNVNISGELTAIIVFSLWGAAEIGDIVRGALESLPKHQVESGQALG 130 Query: 130 LTRKQTIRHIILPQTITT---SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 LT Q RH+++PQ + ++ L++ I K+TS+ I + E+ + Q+I+ Sbjct: 131 LTYGQLYRHVLIPQAVRRMLPGSINLATRMI---KTTSLVVLIGVVEVVKVGQQIIE 184 >gi|123444359|ref|YP_001008324.1| putative amino acid transport system permease [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122091320|emb|CAL14206.1| putative amino acid transport system permease [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 251 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 104/201 (51%), Gaps = 3/201 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ +FP +TL I+ ++ V S I+G + V + S + + ++ + Sbjct: 9 NWTYLLWGTFPDGPLGGAALTLLISLLAGVASAILGTALGV-ALAISRGVWAAVLAAVLG 67 Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FR P+++ +F ++ LP + G+ ++ +L L SAY++ +++ I++I GQW Sbjct: 68 FFRAIPVIMLIFWTYFLLPMVFGVDIPEITTVVCALALIASAYLAHAVKAGIVAIGAGQW 127 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRI 181 A ++G R Q + +ILPQ + +++IS++K TS+A + + E+ F Q Sbjct: 128 QAGLSLGFNRWQVLWFVILPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQVN 187 Query: 182 VSTTYQPLIIYCELAFVYLIL 202 + P+ ++ +A VY +L Sbjct: 188 NRSMVYPMEVFLFVALVYFVL 208 >gi|116250817|ref|YP_766655.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115255465|emb|CAK06541.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 235 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 16/207 (7%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT---IISLIMHFYVWIFRGTPL 70 P+LL A LP+ ++I GF +A+I F ++S + YV R P+ Sbjct: 8 PELLKA-----LPLTLAITFTAMIAGFLLALIATTFRVRRIPVVSQLADLYVSYARSVPV 62 Query: 71 LVQLFVIFYGLPHIGIVFD------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 ++QLFV FYGLP + +F+ VA I+ L+L Y+SE++R + +++ +GQ DA Sbjct: 63 VLQLFVAFYGLPLVVALFEVEDFVSPNVAAIVGLSLYHGGYLSEVLRPAYLAVERGQHDA 122 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++G T Q I ++ PQ + + + I ++ + ++ I ++ TA ++ Sbjct: 123 ADSLGYTFLQKILRVVGPQAVHIALPGYGNSIIYLIHNVALVMYIGAADVMATAHLVMER 182 Query: 185 TYQ--PLIIYCELAFVYLILTSFCYII 209 Y Y LA +Y +L +I+ Sbjct: 183 DYNQYQFETYLVLAVIYSLLCLLAWIV 209 >gi|293193927|ref|ZP_06609887.1| polar amino acid ABC transporter, inner membrane subunit [Actinomyces odontolyticus F0309] gi|292819821|gb|EFF78828.1| polar amino acid ABC transporter, inner membrane subunit [Actinomyces odontolyticus F0309] Length = 290 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 111/206 (53%), Gaps = 13/206 (6%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR-----IFFSDTIISLIMHFYVWI 64 +++FPQ+L + + + + I IS + + +A R +FF I + Y I Sbjct: 71 VEAFPQVL-SGLWLNIRILLISVLGVAVFATLLAAARTLAGPVFFP---IRFLAAAYTDI 126 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAII--ISLTLNFSAYISEIIRSSIISIPKGQW 122 FRG P LV L++I +G+P + A + ++L L +S+Y++E++R+ + S+ Q Sbjct: 127 FRGVPFLVVLYLIGFGIPALNPTTRIPTAFLGTVALILTYSSYVAEVLRAGLDSVHPSQR 186 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A+ ++GL+ QT+R II+PQ I L ++FIS+ K + S + + ++AQ + Sbjct: 187 YAARSLGLSHGQTLRMIIVPQAIRKVTPALMNDFISMQKDVGLISVLGAVDAIRSAQMVQ 246 Query: 183 STTYQPLIIYCELAFVYLILTSFCYI 208 + TY + Y +++IL SF +I Sbjct: 247 AKTYN-MTSYVVAGLLFIIL-SFPFI 270 >gi|225854140|ref|YP_002735652.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae JJA] gi|225723253|gb|ACO19106.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae JJA] Length = 219 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 60/192 (31%), Positives = 106/192 (55%), Gaps = 11/192 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +TL I+ I+ ++S IIG +AV+R ++++ +I Y+ R P L+ +F Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMR-NGKNSVLRIISSIYIEFVRNVPNLLWIFT 74 Query: 77 IFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF +VF S A I + TL SA ++EIIR + ++ KGQ++A + G T Q Sbjct: 75 IF-------LVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQ 127 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYC 193 + +IILPQ I + S+F++++K TS+ S I + E+F +Q ++ ++P ++ Sbjct: 128 ILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFEPEQVFS 187 Query: 194 ELAFVYLILTSF 205 + LI SF Sbjct: 188 LYILIALIYFSF 199 >gi|288922651|ref|ZP_06416827.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EUN1f] gi|288346009|gb|EFC80362.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EUN1f] Length = 213 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 100/189 (52%), Gaps = 14/189 (7%) Query: 22 VVTLPIACISFVISLIIGFFIAVIRI------FFSDTIISLIMHFYVWIFRGTPLLVQLF 75 V TL ++ S V +L++G +A +R+ ++ T YV R TPL + F Sbjct: 13 VRTLGLSLFSAVGALLLGSVLATMRVSPVPPLRWAGTA-------YVETVRNTPLTIVFF 65 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 + + LP + IVF F +++LT+ +A++ E +R+ + + GQ +A+ A+GLT Q+ Sbjct: 66 FVAFVLPQVDIVFSFFAFAVMALTIYHTAFVCEAVRAGVNGVEVGQAEAARALGLTFSQS 125 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 +R +ILPQ PL S ++++++S+A+ + E+ +Q + + +I Sbjct: 126 LRLVILPQAFRNVVQPLGSVGSALIRNSSIAAAFGVQELTGVSQGLATANPGDVIAILLA 185 Query: 196 AFV-YLILT 203 V YL+LT Sbjct: 186 GIVCYLVLT 194 >gi|325122856|gb|ADY82379.1| histidine transport system permease protein [Acinetobacter calcoaceticus PHEA-2] Length = 237 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 13/184 (7%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP-----HI 84 V+S+ IGF +AV + + + + Y ++FRGTPL +QL +I+ G+ H Sbjct: 31 VLSIGIGFVLAVPLSLARVSENPWLRGPVWLYTYVFRGTPLYIQLLIIYSGIYSFDYIHQ 90 Query: 85 GIVFDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 D+F I++ LN AY +EI +I SIP G+ +A+ A G+++ + I Sbjct: 91 HQTLDAFFREGINCTILAFALNTGAYTTEIFAGAIRSIPHGEIEAAQAFGMSKWKRYTRI 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I+P + + +E I +L +T++A T T+P+I + A+ + + TY + A +Y Sbjct: 151 IIPSMLRRALPFYGNEVILMLHATTIAFTATVPDILKIARDVNAATYDTFNAFGIAAVLY 210 Query: 200 LILT 203 +L Sbjct: 211 AVLA 214 >gi|298294125|ref|YP_003696064.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296930636|gb|ADH91445.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 258 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 65/199 (32%), Positives = 107/199 (53%), Gaps = 12/199 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +S P LL + VT+ I I V+ L + F I R+ + +L+ +V FRG PL Sbjct: 13 ESLPALL-DGLKVTMIITAIPLVLGLALAFPICFARMS-ERRLPALLAEIFVVFFRGAPL 70 Query: 71 LVQLFVIFYGLPHIG--------IVFDS-FVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 L+ L++++YGL I I+F S F I++L LN +AY++E++R S++++P G Sbjct: 71 LILLYLVYYGLGQIAALREGPLWILFGSPFGCAIVALALNHAAYMTEVLRGSLMAVPGGI 130 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +AS A+G++R+ + +P I +E IS +K T++ S +TI ++ A I Sbjct: 131 VEASEALGISRRNVFIWVRMPLAIRYGLKAYQNEVISFIKGTAIVSVVTITDLTAVANTI 190 Query: 182 VSTTYQPLI-IYCELAFVY 199 TY P I C AF + Sbjct: 191 FEQTYDPFTPILCAAAFYW 209 >gi|167841347|ref|ZP_02468031.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia thailandensis MSMB43] Length = 294 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 26/206 (12%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV----------IFYGLPHIGIV 87 +G +A+ R+ S + + F +W+FR PL+V L + ++ G+P GI Sbjct: 32 LGVPLALARVSRSPLLAACAWAF-IWMFRSIPLVVLLLILNNLGYLYDHVWLGVPFTGIT 90 Query: 88 F---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 F F A ++ LTLN +A+ +E IR I+S+ +GQ +A+ A+GL R + Sbjct: 91 FADVATADLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRVRQATR 150 Query: 139 IILPQTITTSAVPLS-SEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCEL 195 I+LPQ + + +P++ ++ IS+ K TS+ + +PE+F T Q I + PL++ + Sbjct: 151 IVLPQAM-RAFLPVAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATV 209 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHT 221 YLI+ + I+Q ++E + Sbjct: 210 --WYLIILTVLSIVQAQVERRYARGA 233 >gi|239982050|ref|ZP_04704574.1| amino acid ABC transporter transmembrane protein [Streptomyces albus J1074] gi|291453902|ref|ZP_06593292.1| amino acid ABC transporter permease [Streptomyces albus J1074] gi|291356851|gb|EFE83753.1| amino acid ABC transporter permease [Streptomyces albus J1074] Length = 245 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 12/209 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 I VT+ + S ++ ++ F + + R S + + FY IFRGT LV +F +F+ Sbjct: 13 GIWVTVQLTFYSAALATVVAFGVGMARTHRSK-FVRFLAGFYTEIFRGTSALVLMFWLFF 71 Query: 80 GLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 +P + G F A +++L L++ AY +E++R ++ S+ Q +A A+ T Q +R Sbjct: 72 VVPPLFGWQFVPMYAAVLALGLSYGAYGAEVVRGALNSVTPAQREAGVALSFTPWQRMRL 131 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ-------PLII 191 I+LPQ + P ++ I +LK T++ S + + ++ A + T + L+I Sbjct: 132 ILLPQAVPEMIPPFNNLLIELLKGTAIVSLLGVGDVSFAAYLVRLATQESAQIYTISLLI 191 Query: 192 YCELAFVYLILTSFCYIIQIKIESSVTQH 220 Y +AFV LT ++ K ++ + Q Sbjct: 192 YFVIAFV---LTRGMRALEAKTKAGIGQK 217 >gi|171316941|ref|ZP_02906148.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171097865|gb|EDT42685.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 229 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 107/217 (49%), Gaps = 16/217 (7%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F +L+A V T+ ++ +S ++ +G AV ++ + ++ I Y + R P L Sbjct: 5 GFGPVLWAGTVQTIELSVLSLATAVALGLIGAVAKLS-HNRVLRAIATGYTTLIRSVPDL 63 Query: 72 VQLFVIFY-------------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 V + ++FY G I I D FVA +++L + AY +E R + +S+P Sbjct: 64 VLMLLLFYSIQIWLNQFTDLVGWEQIDI--DPFVAGVLTLGFIYGAYFTETFRGAFLSVP 121 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + A Sbjct: 122 RGQLEAGAAYGMSGMRVFVRIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAA 181 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q +T+ A +YL +T+ ++ I++E Sbjct: 182 QDAGKSTFNMFFFILIAALIYLAITTVSNLVLIQLEK 218 >gi|222082708|ref|YP_002542073.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727387|gb|ACM30476.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 221 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 81/155 (52%) Query: 49 FSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISE 108 + + ++ + Y RGTP+LV + +Y L IGI F A + +L + S+++ E Sbjct: 49 YGNPVLRFFVRAYTDFIRGTPVLVLVLASYYVLSTIGIDLGPFQAGVFALAIFCSSHVGE 108 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 I+R + +IPKGQ +A+ AIGLT QT +++ PQ + + ++K++++ S Sbjct: 109 IVRGGLQAIPKGQTEAAKAIGLTFGQTFAYVLWPQALRQFLPAWVNTAAEMVKASTLLSV 168 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 I + E+ Q I+S + L Y +Y ++ Sbjct: 169 IGVAELLLRMQEIISRNFMSLQFYFFAGLLYFVIN 203 >gi|300812424|ref|ZP_07092854.1| conserved hypothetical protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496591|gb|EFK31683.1| conserved hypothetical protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 230 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 98/178 (55%), Gaps = 3/178 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L+ A + ++ IA IS +I L IG ++R ++ II + Y+ FR P Sbjct: 19 SNFARLM-AGLWTSIWIAAISLIIGLAIGTIFGILRTL-TNKIIRFALRIYLEFFRIVPT 76 Query: 71 LVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +V L++++Y LP + + + +++ +L +A S+I+R +I S+PK Q ++ A+G Sbjct: 77 IVLLYLVYYILPRTFHVNWPATWMAVLAFSLWVAAEFSDIVRGAIESVPKSQRESGLALG 136 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 L++ Q R+++LPQ + + ++K+TS+ I+I E+ Q+I+ Q Sbjct: 137 LSKIQLFRYVLLPQAVKLELPATINLATRVIKTTSLLLVISIMEVINVGQQIIEANNQ 194 >gi|221212964|ref|ZP_03585940.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia multivorans CGD1] gi|221167177|gb|EED99647.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia multivorans CGD1] Length = 250 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 104/201 (51%), Gaps = 7/201 (3%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L++ +FP ++L +A S V S +G + V +L++ F + FR Sbjct: 13 LLVGAFPDGPLGGAALSLVLAIASAVASAALGVGLGVAMALARGPARALLLAF-IGFFRA 71 Query: 68 TPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 P+L+ +F ++ +P H + +++ +L L AY++ + + I++ GQW A Sbjct: 72 IPVLMLIFWTYFLMPILLHTDV--PGLASVVCALALVGGAYLAHAVHAGIVAAGAGQWQA 129 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVS 183 ++GLTR QT+RH++LPQ + +++++++K TS+A + +PE+ F Q Sbjct: 130 GLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNR 189 Query: 184 TTYQPLIIYCELAFVYLILTS 204 P I+ +A +YLI+ + Sbjct: 190 LMVYPAPIFLFVAAIYLIMCT 210 >gi|260778550|ref|ZP_05887442.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] gi|260604714|gb|EEX31009.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] Length = 365 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 103/194 (53%), Gaps = 6/194 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + ++VTL IA + V+SL IG +A+ R II I Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVALALGR-RSEMPIIRSICTVYIEVWRGVPLITVLFMA 213 Query: 78 FYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 LP G D + +I + + +AY++E++R + +IPKGQ++A+ A+GL+ + Sbjct: 214 SVMLPLFLAEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWK 273 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + I+LPQ + + + + FI + K TS+ I + ++ Q +T + L E Sbjct: 274 KMGLIVLPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQA-ANTDPEWLGFATE 332 Query: 195 -LAFVYLILTSFCY 207 FV L+ FC+ Sbjct: 333 SYVFVALVFWVFCF 346 >gi|325956802|ref|YP_004292214.1| amino acid ABC transporter permease [Lactobacillus acidophilus 30SC] gi|325333367|gb|ADZ07275.1| amino acid ABC transporter permease [Lactobacillus acidophilus 30SC] Length = 224 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 101/188 (53%), Gaps = 4/188 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+A + ++ IA +S +I L +G ++R + ++ I+ Y+ FR P +V L++ Sbjct: 18 LFAGLWASIWIAVVSLLIGLALGTIFGILRTM-HNKVVRFILRLYLEFFRIVPTIVLLYL 76 Query: 77 IFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 ++Y LP + + + +++ +L +A S+I+R ++ S+PK Q ++ A+GL+ Q Sbjct: 77 VYYILPRTFHVNWSATWMAVLAFSLWVAAEFSDIVRGALESVPKSQRESGLALGLSNLQL 136 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYC 193 R+++LPQ + + ++K+TS+ I I E+ Q+I+ Q P ++ Sbjct: 137 FRYVLLPQAVKLELPATINLATRVIKTTSLLMVINIMEVINVGQQIIEANNQKYPTGVFW 196 Query: 194 ELAFVYLI 201 F++++ Sbjct: 197 IYGFIFIL 204 >gi|312797282|ref|YP_004030204.1| glutamate/aspartate transport system permease protein gltK [Burkholderia rhizoxinica HKI 454] gi|312169057|emb|CBW76060.1| Glutamate/aspartate transport system permease protein gltK [Burkholderia rhizoxinica HKI 454] Length = 226 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 101/188 (53%), Gaps = 11/188 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++ W I D+ P L + V+TL I ++ V+ ++ G +A++R+ + Y Sbjct: 4 QFNWSG-IPDALPTL-WTGAVITLQITVLAIVVGIVWGTLLALMRLSGFKPL-EWFARGY 60 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-GIVFD-------SFVAIIISLTLNFSAYISEIIRSS 113 V +FR PL++ L F +P + + D V+ +++ +L +AY SEIIR+ Sbjct: 61 VTLFRSIPLVMVLLWFFLLVPQLLQRLLDVSPDVDIRLVSAMVAFSLFEAAYYSEIIRAG 120 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++P+GQ A+ A+G+T Q +R I+LPQ + L ++ I + + TS+ I++ + Sbjct: 121 IQAVPRGQLSAASALGMTYGQGMRLIVLPQALRAMVPLLLTQAIVLFQDTSLVYVISVAD 180 Query: 174 IFQTAQRI 181 FQTA + Sbjct: 181 FFQTAANV 188 >gi|310768127|gb|ADP13077.1| putative ABC transport system, inner membrane component [Erwinia sp. Ejp617] Length = 299 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 19/180 (10%) Query: 61 YVWIFRGTPLLVQLFVIFY----------GLPHIGI---------VFDSFVAIIISLTLN 101 Y+W+FR PL+V L +++ G+P + V F +I LTL Sbjct: 98 YIWLFRSLPLIVVLIILYNFSYLYDRLSLGVPFTPLTLATWKTIDVLGQFSTAVIGLTLV 157 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 +AY +EI+R I + GQ++A+ A+GL + IILPQ + +E IS+ K Sbjct: 158 QAAYTAEIVRGGIAGVDHGQFEAAAALGLPSSRRTLRIILPQALRAIIPGAFNEIISLAK 217 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 T++ + +PE+F T Q + + T Q + + A YL++T+ ++Q +E + + T Sbjct: 218 GTAMVYVLAMPELFYTIQMVYNRTQQVIPLLMVAAVWYLLITTLLSVVQHYVERWLARGT 277 >gi|157371562|ref|YP_001479551.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157323326|gb|ABV42423.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 228 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 12/207 (5%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 ++ + QL+ +VTL +A S +++L+IG A ++ + ++S + Y + RG Sbjct: 1 MLQGYSQLILEGALVTLELALSSVLLALVIGLIGAGGKLS-QNRLLSTVFGAYTTLIRGV 59 Query: 69 PLLVQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 P LV + +IFYGL +G I D A II+L + AY +E R + +++ Sbjct: 60 PDLVLMLLIFYGLQIALNNLTELLGFAQIDIDPLSAGIITLGFIYGAYFTETFRGAYMAV 119 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 KGQ +A+ A G T Q R I+ P + + + + + ILK+T++ S + + ++ + Sbjct: 120 SKGQIEAATAYGFTGSQIFRRILFPAMMRFALPGIGNNWQVILKATALVSILGLNDVVKA 179 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTS 204 Q TYQP VYL+ T+ Sbjct: 180 TQLAGKGTYQPFFFAIVAGVVYLVFTT 206 >gi|150397300|ref|YP_001327767.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] gi|150028815|gb|ABR60932.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] Length = 402 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 63/100 (63%) Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 A+++++ +N ++YI+EI+R +I ++PKGQW+A+ ++GL+R+ T+ IILPQ Sbjct: 269 EMAALLLAIVVNSASYIAEIVRGAIDALPKGQWEAAASLGLSRRDTVHDIILPQVFRVVL 328 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 +++IS+ K+T++ + PE+F I + T L Sbjct: 329 PSFGNQYISLTKNTALGIAVGYPELFNIYGTIANQTGHSL 368 >gi|27367225|ref|NP_762752.1| arginine transporter permease subunit ArtQ [Vibrio vulnificus CMCP6] gi|27358793|gb|AAO07742.1| Arginine ABC transporter, permease protein ArtQ [Vibrio vulnificus CMCP6] Length = 229 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 102/181 (56%), Gaps = 10/181 (5%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIM---HFYVWIFRGTPLLVQLFVIFYGLPHI----- 84 ++SL +G +AV+ T L+ V + RG P L+ + I++G + Sbjct: 22 LVSLAVGLVLAVVFAGGEMTRHRLVKWPTTALVTVLRGLPELLVVLFIYFGSTQVLFLLT 81 Query: 85 G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 G I F++ +I+L+L F++Y S+ IR ++ ++ KGQ +A+ A+G+++ +T I+LP Sbjct: 82 GDFIEVSPFLSGVIALSLIFASYASQTIRGALKAVNKGQREAASALGMSKSRTFFRIVLP 141 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + + L+++++ +LK T++ S I + ++ + AQ + T++ Y A +YL++ Sbjct: 142 QAVRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVI 201 Query: 203 T 203 T Sbjct: 202 T 202 >gi|115524737|ref|YP_781648.1| polar amino acid ABC transporter, inner membrane subunit [Rhodopseudomonas palustris BisA53] gi|115518684|gb|ABJ06668.1| polar amino acid ABC transporter, inner membrane subunit [Rhodopseudomonas palustris BisA53] Length = 500 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 15/215 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQ 73 ++ ++VTL ++ V S+ IG +A+ R + I LI F ++ +RG PL+ Sbjct: 287 MWGGLLVTLVVSVTGIVASMPIGIALALGR----RSTIPLIRIFSVMFIEFWRGVPLITV 342 Query: 74 LFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LF Y LP D V ++I + L AY +E++R + +IP+GQ +AS A+GL Sbjct: 343 LFFATYMLPLFLPGNFTVDGMVRVLIGIALFAGAYNAEVVRGGLQAIPRGQAEASSALGL 402 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT--YQP 188 + +T I+LPQ + L + FI++ K TS+ S + + ++ + S P Sbjct: 403 SYWKTTGLIVLPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLGQLRAAFSDPVWSTP 462 Query: 189 LIIYCELAFVYLILTSFCYII---QIKIESSVTQH 220 ++ AF +I FC+ + + +E + H Sbjct: 463 TTLFTGFAFTGIIYFVFCFGMSRYSLSVEHRLNAH 497 >gi|325836760|ref|ZP_08166227.1| ABC transporter, permease protein [Turicibacter sp. HGF1] gi|325491138|gb|EGC93427.1| ABC transporter, permease protein [Turicibacter sp. HGF1] Length = 225 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 108/187 (57%), Gaps = 8/187 (4%) Query: 4 EW-FNLIID--SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF 60 EW N++ + +F +LL + VTL I+ IS +IS+++G + ++ + ++ LI Sbjct: 3 EWGINVLFEGKNFIRLL-QGLGVTLEISLISVMISVVLGLVMGML-MRVKTKVVRLICRL 60 Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 Y+ R P LV LF+ ++GL GI VA I+ + A + +++R ++ SIPK Sbjct: 61 YLNTVRIVPQLVLLFLAYFGLSKSFGINLSGEVASILVFSFWGIAEMGDLVRGALDSIPK 120 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS-ILKSTSVASTITIPEIFQTA 178 Q++ + AIGL ++Q ++II+PQTI +P + ++ I+K+TS+ I + E+ + Sbjct: 121 HQYETALAIGLNQRQIYQYIIIPQTI-RRLLPQTINLVTRIIKTTSLIVLIGVVEVVKVG 179 Query: 179 QRIVSTT 185 Q+I+ + Sbjct: 180 QQIIEAS 186 >gi|184154545|ref|YP_001842885.1| glutamine ABC transporter permease component [Lactobacillus fermentum IFO 3956] gi|183225889|dbj|BAG26405.1| glutamine ABC transporter permease component [Lactobacillus fermentum IFO 3956] Length = 418 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 100/186 (53%), Gaps = 4/186 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIFRG 67 +I S L + + TL + + ++L+ G + V+ I SD I S I ++IFRG Sbjct: 209 LIKSNKDALLSGLGETLLLTVVGVALALLFGVILGVMGI--SDRKIFSSISSVIIYIFRG 266 Query: 68 TPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P++V F I+ G+P IG F A I++L L+ AY+ I++ ++ +GQW+A+ Sbjct: 267 MPMIVLAFFIYIGMPSVIGHKIPLFTAGILTLMLDEGAYVGAIVKGGFQAVDRGQWEAAR 326 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL +T+ +I+PQ I L ++ I LK TS+ S I + E+ QT I++ Sbjct: 327 SLGLPYYKTLVKVIMPQGIKIMVPSLVNQLIITLKDTSILSAIGVMELTQTGTVIIARNM 386 Query: 187 QPLIIY 192 + I+ Sbjct: 387 EGFKIW 392 >gi|284052501|ref|ZP_06382711.1| polar amino acid ABC transporter, inner membrane subunit [Arthrospira platensis str. Paraca] Length = 405 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 117/213 (54%), Gaps = 11/213 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIFRGTPLLVQLF 75 L+ +++TL ++ IS ++ +G +A+ R SD +I + Y+ + RG PL+ LF Sbjct: 195 LWGGLMLTLLMSVISILLCFPLGVLLALGRQ--SDLPVIRGLSIAYIEVIRGLPLITILF 252 Query: 76 VIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 + LP G+ D + I+ LT+ SAY++E +R + +IP+GQ++A+ A+G+ Sbjct: 253 MGQILLPLFLPEGMRPDRILRAIVGLTMFSSAYLAENVRGGLQAIPRGQYEAAKALGINA 312 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 T+ IILPQ + S + +FIS+ + T++ + + + E+ ++ I++ + L Y Sbjct: 313 PLTMALIILPQALKISIPSIVGQFISLFQDTTLLAIVGLVELLGISRSILANP-RFLGRY 371 Query: 193 CEL-AFVYLILTSFCYIIQI---KIESSVTQHT 221 E+ FV ++ FCY++ + K+E + Sbjct: 372 AEVYLFVGILYWLFCYLMSLASRKLEKQLNTEN 404 >gi|303233192|ref|ZP_07319865.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4] gi|302480777|gb|EFL43864.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4] Length = 324 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 110/200 (55%), Gaps = 3/200 (1%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W ++ S + L + TL IA + +SL +G + + RI + +++ + + Sbjct: 57 WNFFLLPSTWRFLGQGFLGTLSIAVCAGALSLALGLVLMLCRIS-HNVVLTWVARILIDF 115 Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 FRG P L+ ++ F +P GI SF I + + +A ++E+ R+ + ++ KGQ +A Sbjct: 116 FRGVPSLLLIYFCFLVIPRYGIKLASFWMITLPVACAAAAVLAEVFRAGVHAVGKGQKEA 175 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + A+G +R Q ++ ++LPQ I L S+ + ++K T+VA ++ P++ Q A R++ T Sbjct: 176 ARALGFSRWQVLKLVVLPQAIRYVIPALISQLVVVVKDTTVAYVVSYPDLMQNA-RVLIT 234 Query: 185 TYQPLI-IYCELAFVYLILT 203 Y L+ +Y +A +Y+++ Sbjct: 235 NYDALVSVYFVIAAIYILVN 254 >gi|83592119|ref|YP_425871.1| binding-protein dependent transport system inner membrane protein [Rhodospirillum rubrum ATCC 11170] gi|83575033|gb|ABC21584.1| Binding-protein-dependent transport systems inner membrane component [Rhodospirillum rubrum ATCC 11170] Length = 387 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 61/85 (71%) Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 F+A+++ L +N SA I EI+RS I ++P+GQW+A+ ++GLTR +T+R ++LPQ + Sbjct: 256 EFLALLVGLVINASAVICEIVRSGIEAVPEGQWEAARSLGLTRGRTLRLVVLPQALRVVI 315 Query: 150 VPLSSEFISILKSTSVASTITIPEI 174 ++S ++S+ K++S+A I P++ Sbjct: 316 PLMTSSYLSLTKNSSLAVAIGFPDL 340 Score = 37.0 bits (84), Expect = 2.1, Method: Compositional matrix adjust. Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 4/90 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 DS+ + L I+ T ++ I +++ ++G + + R+ ++ +IS + YV + R TPL Sbjct: 76 DSYARALGVGILNTALVSIIGCLLATLLGVALGIGRLS-ANLLISRAVQLYVEVIRNTPL 134 Query: 71 LVQLF---VIFYGLPHIGIVFDSFVAIIIS 97 L+QLF + LP F+ + ++ Sbjct: 135 LLQLFFWSATIHALPGPRQAFEPLTGVFLT 164 >gi|291569088|dbj|BAI91360.1| putative ABC transporter permease protein [Arthrospira platensis NIES-39] Length = 405 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 117/213 (54%), Gaps = 11/213 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIFRGTPLLVQLF 75 L+ +++TL ++ IS ++ +G +A+ R SD +I + Y+ + RG PL+ LF Sbjct: 195 LWGGLMLTLLMSVISILLCFPLGVLLALGRQ--SDLPVIRGLSIAYIEVIRGLPLITILF 252 Query: 76 VIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 + LP G+ D + I+ LT+ SAY++E +R + +IP+GQ++A+ A+G+ Sbjct: 253 MGQILLPLFLPEGMRPDRILRAIVGLTMFSSAYLAENVRGGLQAIPRGQYEAAKALGINA 312 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 T+ IILPQ + S + +FIS+ + T++ + + + E+ ++ I++ + L Y Sbjct: 313 PLTMALIILPQALKISIPSIVGQFISLFQDTTLLAIVGLVELLGISRSILANP-RFLGRY 371 Query: 193 CEL-AFVYLILTSFCYIIQI---KIESSVTQHT 221 E+ FV ++ FCY++ + K+E + Sbjct: 372 AEVYLFVGILYWLFCYLMSLASRKLEKQLNTEN 404 >gi|170703222|ref|ZP_02894026.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|172060112|ref|YP_001807764.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria MC40-6] gi|170131872|gb|EDT00396.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|171992629|gb|ACB63548.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 229 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 107/217 (49%), Gaps = 16/217 (7%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F +L+A V T+ ++ +S ++ +G AV ++ + ++ I Y + R P L Sbjct: 5 GFGPVLWAGTVQTIELSVLSLAAAVALGLIGAVAKLS-HNRVLRAIATGYTTLIRSVPDL 63 Query: 72 VQLFVIFY-------------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 V + ++FY G I I D FVA +++L + AY +E R + +S+P Sbjct: 64 VLMLLLFYSIQIWLNQFTDLVGWEQIDI--DPFVAGVLTLGFIYGAYFTETFRGAFLSVP 121 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + A Sbjct: 122 RGQLEAGAAYGMSGMRVFVRIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAA 181 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q +T+ A +YL +T+ ++ I++E Sbjct: 182 QDAGKSTFNMFFFILIAALIYLAITTVSNLVLIQLEK 218 >gi|83593587|ref|YP_427339.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC 11170] gi|83576501|gb|ABC23052.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170] Length = 232 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 89/174 (51%), Gaps = 16/174 (9%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF 78 AA+ + L + +SF L++G +++ + + + + Y +FRG P L+ + +++ Sbjct: 14 AAMTIKLVLGAVSF--GLVLGLIGTTLKLS-RNALARAVGNAYTDLFRGLPELLVVLIMY 70 Query: 79 YGLP-------------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 YG + + +V ++SL L F AY SE+ R +I++IP+G +A+ Sbjct: 71 YGAEALVRWLVNDVLALDVAVSISPYVGGVLSLGLIFGAYASEVFRGAILAIPRGHVEAA 130 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 A G+ T R IILPQ + L + F+ LK T++ S I + E+ ++A Sbjct: 131 RAFGMGPVLTYRRIILPQVWRVALPGLGNLFLVSLKDTALVSAIGLNELMRSAN 184 >gi|325686265|gb|EGD28307.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 224 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 98/178 (55%), Gaps = 3/178 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L+ A + ++ IA IS +I L IG ++R ++ II + Y+ FR P Sbjct: 13 SNFARLM-AGLWTSIWIAAISLIIGLAIGTIFGILRTL-TNKIIRFALRIYLEFFRIVPT 70 Query: 71 LVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +V L++++Y LP + + + +++ +L +A S+I+R +I S+PK Q ++ A+G Sbjct: 71 IVLLYLVYYILPRTFHVNWPATWMAVLAFSLWVAAEFSDIVRGAIESVPKSQRESGLALG 130 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 L++ Q R+++LPQ + + ++K+TS+ I+I E+ Q+I+ Q Sbjct: 131 LSKIQLFRYVLLPQAVKLELPATINLATRVIKTTSLLLVISIMEVINVGQQIIEANNQ 188 >gi|304415312|ref|ZP_07395997.1| membrane component of arginine ABC transporter [Candidatus Regiella insecticola LSR1] gi|304282830|gb|EFL91308.1| membrane component of arginine ABC transporter [Candidatus Regiella insecticola LSR1] Length = 222 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 113/217 (52%), Gaps = 15/217 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 +ID Q++ + +L + +S ++L+ +I + + SL+ Y+ +F GT Sbjct: 1 MIDYLWQIM-TGLSTSLTLTMVSLSLALVFALLFTLILTLKTPLLTSLV-RIYITLFTGT 58 Query: 69 PLLVQLFVIFYG---LPHIG-------IVFDSFVAIIISLTLNFSAYISE-IIRSSIISI 117 PLLVQ+F+I+YG P I + ++ +I+L LN +AY + ++ +I Sbjct: 59 PLLVQIFLIYYGPGQFPSIQQYPWLWHTLSQPWLCAMIALALNSAAYTTPYCFYGAVQAI 118 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQW + A+G++ Q++R I+ P I S S+E I + KSTS+ TIT+ +I Sbjct: 119 PAGQWQSCAALGMSSAQSMR-ILFPFAIKRSLSSYSNEVILVFKSTSLVYTITLMDIMGQ 177 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 +Q + TY ++++ VYL + + ++ +E Sbjct: 178 SQMLYGRTYD-VMVFVAAGIVYLSINTLLTLLMRWLE 213 >gi|89514281|gb|ABD75004.1| putative amino acid ABC transporter permease protein [Sinorhizobium kostiense] Length = 138 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 56/82 (68%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV FRGT LLVQLF +F+ LP GI + +++ LN AY +++++ +I S+P+G Sbjct: 57 YVEFFRGTSLLVQLFWLFFVLPLFGITLEPLFTGFLAVGLNIGAYGAQLVQGAIKSVPRG 116 Query: 121 QWDASYAIGLTRKQTIRHIILP 142 QW+A+YA+ ++ + +R II+P Sbjct: 117 QWEAAYALSMSPAKRMRRIIIP 138 >gi|284007897|emb|CBA73835.1| arginine ABC transporter, permease protein [Arsenophonus nasoniae] Length = 189 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 11/145 (7%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD----------SFVAIIISLTLNF 102 I S I+ Y+ +F GTPLLVQ F+I+YG + D ++ +++L LN Sbjct: 11 IFSSIIKGYITLFTGTPLLVQFFLIYYGPGQFPALRDYPALWALISTPWICALLALALNS 70 Query: 103 SAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 +AY + + ++ +IPK W A A+G++ QT+R IILP + + S+E I I KS Sbjct: 71 AAYSTLLFHGAVKAIPKTSWQACQALGMSNHQTLR-IILPYALKRALSSYSNEVILIFKS 129 Query: 163 TSVASTITIPEIFQTAQRIVSTTYQ 187 TS+ASTIT+ EI +Q+I TY Sbjct: 130 TSLASTITLLEIMGYSQQIFGQTYN 154 >gi|228476976|ref|ZP_04061614.1| polar amino acid ABC uptake transporter membrane-spanning protein [Streptococcus salivarius SK126] gi|228250995|gb|EEK10166.1| polar amino acid ABC uptake transporter membrane-spanning protein [Streptococcus salivarius SK126] Length = 307 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 15/207 (7%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + + D+ PQ++ + +TL + LI+ AV++I I+ I +V Sbjct: 68 WKAVFDAVPQIV-ERLPLTLGLTIAGAFFGLILALVFAVVKIN-RVRILYPIQAVFVSFL 125 Query: 66 RGTPLLVQLFVIFYGLP--------HIGIVFD-----SFVAIIISLTLNFSAYISEIIRS 112 RGTP+LVQL + +YG+P G+ ++ + I + N +AY+SE IR+ Sbjct: 126 RGTPILVQLMLTYYGIPLFLRYLNAEFGLDWNINEIPPAIFAITAFAFNEAAYMSETIRA 185 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I ++ G+ +A+ ++G+T Q R +I+P + L + I + K TS+A + I Sbjct: 186 AIQAVDAGEIEAARSLGMTSAQVYRRVIIPNAAVIATPSLINSLIGLTKGTSLAFSAGIV 245 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVY 199 E++ AQ + Y+ Y +A VY Sbjct: 246 EMYAQAQILGGADYRYFERYISVALVY 272 >gi|33598572|ref|NP_886215.1| glutamate/aspartate transport system permease protein [Bordetella parapertussis 12822] gi|33574701|emb|CAE39358.1| glutamate/aspartate transport system permease protein [Bordetella parapertussis] Length = 228 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 11/207 (5%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I S L +V TL + +S + L +G +A+ R+ S YV Sbjct: 6 FDVIGRSLGYLFRDGMVFTLKLTFLSTAMGLALGTLLAMCRL--SGIRPLSAAAAYVNGL 63 Query: 66 RGTPLLVQLFVIFYGLPHIG---------IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 R PL++ +F ++ +P+IG + F + +I+ TL +AY EI+R+ I S Sbjct: 64 RALPLILVIFWFYFLVPYIGGWLTGAGRPLQVGGFTSALITFTLFEAAYFCEIMRAGIQS 123 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP+GQ A+YAIGL QT+ +++LPQ + A L ++ I + + TS+ +++ + Sbjct: 124 IPRGQTSAAYAIGLNYWQTMAYVVLPQALRNMAPVLLTQTIVLFQDTSLVYVLSLTDFLG 183 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 + + + +Y +A VY +++ Sbjct: 184 AGINVAQRDNRLVEMYLFVAAVYFVMS 210 >gi|332530478|ref|ZP_08406419.1| amino acid ABC transporter permease [Hylemonella gracilis ATCC 19624] gi|332040047|gb|EGI76432.1| amino acid ABC transporter permease [Hylemonella gracilis ATCC 19624] Length = 225 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 90/175 (51%), Gaps = 1/175 (0%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 LL + T+ + ++ ++S ++G +A + + D + + R P L+ + Sbjct: 16 DLLLNGLGTTVLLFVLAAMLSFVLGCLLAWL-LEGRDNAPRRTLRLGINALRMLPFLIFI 74 Query: 75 FVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 ++++YGLP + I +++ A +I L+ ++AY +E++R + + +P G DA+YA G R + Sbjct: 75 YLLYYGLPSLDIRLEAWDAGLIGLSCYYAAYYAEVLRGARLVLPSGSLDAAYAHGYRRGK 134 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 I+LPQ + + + I LK TS IT+ E+ A + S + P+ Sbjct: 135 AFLRIVLPQLVMRTRGESGNLLIMCLKDTSFLGIITVTELTAAANAMSSRYFIPM 189 >gi|311894709|dbj|BAJ27117.1| putative amino acid ABC transporter permease protein [Kitasatospora setae KM-6054] Length = 293 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 76/123 (61%), Gaps = 3/123 (2%) Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 YV +FRG P ++ +F+I +G+P + G V I+L ++++AY++E+ R+ + S Sbjct: 124 LYVDVFRGVPTMLLIFLIGFGVPAMQLQGTPKSPVVLGAIALVVSYTAYVAEVFRAGLTS 183 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + Q +A+ A+GL+R+QT+R ++LPQ + L ++FI++ K T++ + + E + Sbjct: 184 VHPAQHNAARALGLSRQQTMRSVVLPQAVRNVLPALLNDFIALQKDTALVAVLGPLEALR 243 Query: 177 TAQ 179 AQ Sbjct: 244 VAQ 246 >gi|326803651|ref|YP_004321469.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] gi|326651650|gb|AEA01833.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] Length = 230 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 103/195 (52%), Gaps = 13/195 (6%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI---ISLIMHFYVWIFRGTP 69 FP L+ ++ +P++ +IS +G + +I + + I Y++I R TP Sbjct: 10 FP--LFKELIPFIPVSLFILIISFTLGNLLGLILAYGLEAKQRWYQQITKTYIFIMRCTP 67 Query: 70 LLVQLFVIFYGLPH-------IGI-VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 +V +F++FYGLP I I F V +II+LTL + A IS + ++S ++ KGQ Sbjct: 68 PIVMIFLVFYGLPQLLKWWLKINIHDFSQAVFVIIALTLLYGANISVVFKASYDAVNKGQ 127 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A A+GL+ +T I+LPQ + + + + +S+LK+T++A TI + ++ Q Sbjct: 128 REAGLALGLSEARTFFRILLPQALRIALPNIGNSTVSLLKNTALAYTIGLIDVMGAGQLF 187 Query: 182 VSTTYQPLIIYCELA 196 ++ + +LA Sbjct: 188 INRNMGNFSLETDLA 202 >gi|322832149|ref|YP_004212176.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321167350|gb|ADW73049.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 238 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 82/152 (53%) Query: 74 LFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LF I LP FV +I+L+L +SAY S+ +R ++ ++P+GQW++ +G+ + Sbjct: 87 LFAIPIKLPIENFEVSPFVCGVIALSLLYSAYASQTLRGALKAVPQGQWESGQVLGMKKS 146 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 +I+PQ + LS++++ +LK T++ S I++ ++ + I + T +P Y Sbjct: 147 AIFFRLIMPQMWRHALPGLSNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYV 206 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 A +YL++T F + +IE T+ S Sbjct: 207 IAACIYLLVTLFSQFVIKRIELRTTRFERSAS 238 >gi|311108045|ref|YP_003980898.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 17 [Achromobacter xylosoxidans A8] gi|310762734|gb|ADP18183.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 17 [Achromobacter xylosoxidans A8] Length = 216 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 74/135 (54%), Gaps = 1/135 (0%) Query: 66 RGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 +G PLL L ++G+P +GI + A+ ++ + +A++ +I I ++ QW+A Sbjct: 60 QGVPLLGLLMFFYFGMPVFLGIEVPALTAVSVAFIIYTAAFLGQIWYGGIQAVKHEQWEA 119 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + +GL++ RH+I PQ S P + ++K TS+AS + E+ + Q + Sbjct: 120 AACLGLSKWHQFRHVIAPQAFRLSLPPTVGFLVQLIKGTSLASVVGFVELARAGQIASAA 179 Query: 185 TYQPLIIYCELAFVY 199 T+QPL++Y +A +Y Sbjct: 180 TFQPLLVYSCVALLY 194 >gi|49081868|gb|AAT50334.1| PA0889 [synthetic construct] Length = 230 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 12/153 (7%) Query: 59 HFYVWIFRGTPLLVQLFVIFYG--------LPHIG----IVFDSFVAIIISLTLNFSAYI 106 Y + RG P LV + +IFYG P +G I + FV+ + +L F AY+ Sbjct: 50 DLYATVVRGIPDLVLILLIFYGGQGLLNWVAPQLGYDDYIDLNPFVSGVGTLGFIFGAYL 109 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 SE R ++IPKGQ +A YA G++ +Q I +PQ I + ++ ++ ++K+T++ Sbjct: 110 SETFRGVFMAIPKGQGEAGYAYGMSHRQVFFRIQVPQMIRLAIPGFTNNWLVLVKATALI 169 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 S + + ++ A++ T +P Y +A +Y Sbjct: 170 SVVGLQDMMFKAKQASDATREPFTYYLAVAGLY 202 >gi|293396872|ref|ZP_06641146.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] gi|291420343|gb|EFE93598.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] Length = 238 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 114/229 (49%), Gaps = 25/229 (10%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP-LLVQ 73 Q L +A +T+ +A + + LI+ AV + ++S + +V + RG P +LV Sbjct: 5 QPLASAAGMTVGLAVCALALGLILAMLFAVWESARWN-VVSWLGTAWVTLLRGLPEILVV 63 Query: 74 LFVIF----------------YGLPHIGIVFD-------SFVAIIISLTLNFSAYISEII 110 LF+ F GL + I D F+ +I+L L +SAY S+ + Sbjct: 64 LFIYFGSSQLLLILSDGFTLNLGLFELPIQIDIENFEVSPFLCGVIALALLYSAYASQTL 123 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R ++ ++P+GQW++ A+GL++ +I+PQ + L ++++ +LK T++ S I+ Sbjct: 124 RGALKAVPQGQWESGQALGLSKAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLIS 183 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + ++ + I + T +P Y A +YL++T + +IE T+ Sbjct: 184 VNDLMLQTKSIATRTQEPFTWYVIAAAIYLLVTLLSQYVIKRIELRTTR 232 >gi|75675720|ref|YP_318141.1| amino acid ABC transporter, inner membrane component [Nitrobacter winogradskyi Nb-255] gi|74420590|gb|ABA04789.1| amino acid ABC transporter membrane protein 1, PAAT family [Nitrobacter winogradskyi Nb-255] Length = 401 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 75/115 (65%), Gaps = 1/115 (0%) Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 FVA+ I+L+ +A+I+E++R+ I+S+ KGQ +A A+GL+R T+R I++PQ + Sbjct: 267 EFVALAIALSTYTAAFIAEVVRAGILSVHKGQMEAGAALGLSRGSTLRLIVVPQAMRVVL 326 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQT-AQRIVSTTYQPLIIYCELAFVYLILT 203 PL+++++++ K++S+A I PE+F A +S T Q + I VYL+++ Sbjct: 327 PPLTNQYLNLTKNSSLAVAIGYPELFSVFAGTTLSQTGQAIEILAITMGVYLLIS 381 >gi|70728644|ref|YP_258394.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68342943|gb|AAY90549.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 236 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 15/185 (8%) Query: 29 CISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF 88 CI F++S+ + ++ R+ I + FY ++FRGTPL +QL + + G+ I + Sbjct: 35 CIGFLVSIPL----SIARVS-PKRYIRWPVQFYTYLFRGTPLYIQLLICYTGIYSIAAIR 89 Query: 89 ----------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 D+ I++ LN AY +EI +I S+ G+ +A+ A GL+ + + Sbjct: 90 AQPVLDAFFRDAMNCTILAFALNTCAYTTEIFAGAIRSMAHGEVEAAKAYGLSGWKLYAY 149 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 +I+P + S S+E I +L ST+VA T TIP+I + A+ S T+ + A + Sbjct: 150 VIMPSALRRSLPYYSNEVILMLHSTTVAFTATIPDILKIARDANSATFLTFQSFGIAAII 209 Query: 199 YLILT 203 YL +T Sbjct: 210 YLCVT 214 >gi|115351108|ref|YP_772947.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria AMMD] gi|115281096|gb|ABI86613.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia ambifaria AMMD] Length = 253 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 107/217 (49%), Gaps = 16/217 (7%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F +L+A V T+ ++ +S ++ +G AV ++ + ++ I Y + R P L Sbjct: 29 GFGPVLWAGTVQTIELSVLSLAAAVALGLIGAVAKLS-HNRVLRAIATGYTTLIRSVPDL 87 Query: 72 VQLFVIFY-------------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 V + ++FY G I I D FVA +++L + AY +E R + +S+P Sbjct: 88 VLMLLLFYSIQIWLNQFTDLVGWEQIDI--DPFVAGVLTLGFIYGAYFTETFRGAFLSVP 145 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + A Sbjct: 146 RGQLEAGAAYGMSGMRVFVRIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAA 205 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q +T+ A +YL +T+ ++ I++E Sbjct: 206 QDAGKSTFNMFFFILIAALIYLAITTVSNLVLIQLEK 242 >gi|222082286|ref|YP_002541651.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726965|gb|ACM30054.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 221 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 62/220 (28%), Positives = 121/220 (55%), Gaps = 17/220 (7%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWIFRGTP 69 S+ L A V+T+ ++ ++ +I I G +A+ R + +++L+ +V FR P Sbjct: 3 SYLPLFLKAAVLTIWLSWLALMIGAIAGGLVALARTSRWLPLRVLALL---FVEFFRSIP 59 Query: 70 LLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 +L+ +F ++GLP + GI +F A ++L L+ +A +SE++R+ I S+ +GQW+A+ + Sbjct: 60 ILIVMFFAYFGLPVMFGIDISTFTAATLALALHATATMSEVMRAGIESVGRGQWEAAQSS 119 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT--- 185 G+T QT+RH++ PQ + P +++ LK +S+AS I E+ +T + +T Sbjct: 120 GMTFGQTMRHVVGPQALRVVLPPSVGVYVTTLKESSLASIIGYVELTKTGLLVRESTGGG 179 Query: 186 YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + PL++ L +Y ++ I + V + Y+V Sbjct: 180 FAPLLM---LGVLYFLIN-----YGISLAGGVLERRYNVG 211 >gi|331702184|ref|YP_004399143.1| polar amino acid ABC transporter inner membrane subunit [Lactobacillus buchneri NRRL B-30929] gi|329129527|gb|AEB74080.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus buchneri NRRL B-30929] Length = 212 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 48/153 (31%), Positives = 81/153 (52%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEII 110 + +I Y+ +FR PLLV + +P + F + I L L SA+I+E + Sbjct: 45 NKFFRVIARVYIEVFRNIPLLVITMFFYVVIPMYIVEISGFASGTIGLILYSSAFIAETV 104 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 RS I S+ GQ + + A GL+ Q +R+I+LPQ PL ++FI+++K++SV + + Sbjct: 105 RSGIQSVDPGQMEGARANGLSFWQAMRYIVLPQAFRYVIPPLGNQFINLVKNSSVLAFVA 164 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ I S + Q + Y + +YLILT Sbjct: 165 GFDLMYQGNVIASDSLQSMSTYLCVGVLYLILT 197 >gi|242241398|ref|YP_002989579.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242133455|gb|ACS87757.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 246 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 81/146 (55%), Gaps = 22/146 (15%) Query: 61 YVWIFRGTPLLVQLFVIFYGL--------------PHIGIVFD-------SFVAIIISLT 99 Y +FR TPLLVQLF ++G PH ++F F+A + LT Sbjct: 65 YCALFRNTPLLVQLFFWYFGAGQLLPECLMQWLNTPHT-LLFSFLSWPSFEFLAGLFGLT 123 Query: 100 LNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISI 159 L +A+ISE +R+ I + GQ A+ A+GLT Q +R+++LPQ + + PL ++++I Sbjct: 124 LYSAAFISEEVRAGIAGVAGGQKYAACALGLTHWQAMRYVVLPQALKIALPPLLGQYMNI 183 Query: 160 LKSTSVASTITIPEIFQTAQRIVSTT 185 +K++S+ I + E+ ++++ + T Sbjct: 184 IKNSSLTMAIGVAELSYASRQVETET 209 >gi|261344517|ref|ZP_05972161.1| glutamate/aspartate ABC transporter, permease protein [Providencia rustigianii DSM 4541] gi|282567429|gb|EFB72964.1| glutamate/aspartate ABC transporter, permease protein [Providencia rustigianii DSM 4541] Length = 250 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 53/193 (27%), Positives = 103/193 (53%), Gaps = 29/193 (15%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQLFV 76 ++T+ I+ + + + ++GF +A R D+ I+ + F Y+ IFR TPLLVQLF Sbjct: 27 GFLLTVWISVCTIIAATLLGFIVASAR----DSQIAPLRWFVSAYISIFRNTPLLVQLFF 82 Query: 77 IFY--------------GLPH----IGIVFD----SFVAIIISLTLNFSAYISEIIRSSI 114 ++ PH G++ F+A + LTL +I+E +RS I Sbjct: 83 WYFASGEILPASMMEWLNTPHEVHFFGVMLSWPSFEFLAGFVGLTLYTVPFIAEEVRSGI 142 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 + +GQ A++A+GLT Q ++ ++LPQ + + PL ++++++K++S+ I + E+ Sbjct: 143 RGVRQGQKQAAFALGLTSWQAMKLVVLPQAVKIALPPLLGQYMNVVKNSSLTMAIGVAEL 202 Query: 175 FQTAQRIVSTTYQ 187 ++++ S + Q Sbjct: 203 SYVSRQVDSQSLQ 215 >gi|209546900|ref|YP_002278818.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538144|gb|ACI58078.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 220 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 96/178 (53%), Gaps = 2/178 (1%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 V+L + V+ +++GF +A++ I ++ L +V FR TP +VQ+ IFY +P Sbjct: 21 VSLQLTAAVNVLGVVLGFGLALL-IMSPIKVVRLPFMLFVEFFRCTPAIVQIVWIFYCVP 79 Query: 83 HIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIIL 141 + VF D I++L LN A+ +E R+SI ++P+ Q DA A+GL Q + +I+ Sbjct: 80 MLFDVFLDPMTMGIMALGLNLMAFNAEAYRASIQAVPREQLDAGIALGLNPLQRVLYIVF 139 Query: 142 PQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 P S L + I I + +++ + + I ++ + + + TY+P+ + +A +Y Sbjct: 140 PTAFRASIPVLLTNGIVIFQQSALVAIVAIQDLMYQGKTLATETYRPIETFTVVALIY 197 >gi|254229977|ref|ZP_04923378.1| ABC-type amino acid transport system, permease component [Vibrio sp. Ex25] gi|262392807|ref|YP_003284661.1| putative amino acid ABC transporter permease [Vibrio sp. Ex25] gi|151937479|gb|EDN56336.1| ABC-type amino acid transport system, permease component [Vibrio sp. Ex25] gi|262336401|gb|ACY50196.1| putative amino acid ABC transporter permease protein [Vibrio sp. Ex25] Length = 246 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 59/199 (29%), Positives = 108/199 (54%), Gaps = 9/199 (4%) Query: 2 KYEWFNLIIDSFPQ-------LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII 54 Y+W ++D + L A T+ ++ +S + ++ +G IA+ + S + Sbjct: 19 DYQWGWYVLDPSTEQGLTNLKFLIAGFSDTIQVSLLSMLFAMTLGLIIALPALSNS-PYL 77 Query: 55 SLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSS 113 I YV + R P+LV L ++YG+P + + + F A +I+LT+ SA+++E+ R Sbjct: 78 KWINRIYVEVVRSVPVLVLLLWVYYGMPTLLDVSLNHFWAGVIALTIAESAFMAEVFRGG 137 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I +I +GQ +A+ ++GL+ Q + +ILPQ PL ++F+ ILK +S+ S I + + Sbjct: 138 IQAISRGQHEAAESLGLSYWQKMHLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLSD 197 Query: 174 IFQTAQRIVSTTYQPLIIY 192 + + A +V Y PL IY Sbjct: 198 LTRRANELVVNEYLPLEIY 216 >gi|326789991|ref|YP_004307812.1| polar amino acid ABC transporter inner membrane protein [Clostridium lentocellum DSM 5427] gi|326540755|gb|ADZ82614.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium lentocellum DSM 5427] Length = 225 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 109/204 (53%), Gaps = 16/204 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L + V + +A I+ ++S ++G + ++ + + +I Y+ R P+LV LF+ Sbjct: 18 LIGGLGVAMKVALIAMILSGVLGIVLGIL-MTSKHKAVKVICRIYLEAIRIIPILVWLFI 76 Query: 77 IFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 ++GL IG ++ + II TL +A + +I+R +I S+PK Q D+ AIGL+ Q Sbjct: 77 FYFGLTKLIGYHIEAEIISIIVFTLWGTAEMGDIVRGAITSMPKAQSDSGRAIGLSEIQI 136 Query: 136 IRHIILPQTITT---SAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT-----YQ 187 R+II+PQ I +A+ L++ + K+TS+ I + E+ + Q+I+ + Sbjct: 137 YRYIIIPQAIRRMLPTAINLATRMV---KTTSLIVLIGVVEVLKVGQQIIEASILKVPSA 193 Query: 188 PLIIYCELAFVYLILTSFCYIIQI 211 PL +Y F++++ CY I I Sbjct: 194 PLWVY---GFIFILYFIICYPISI 214 >gi|330950463|gb|EGH50723.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 162 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 45/114 (39%), Positives = 65/114 (57%) Query: 52 TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 TI+ + Y+ FR TPL+VQL+V+F+ LP GI F + +I L ++AYI+E R Sbjct: 49 TIVHRLSKGYLSFFRNTPLMVQLYVLFFALPLAGITFPAITTGVIGLGCYYAAYIAEAYR 108 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 +I IP GQW+A+ A+ R T R IILPQ + L + I + K T + Sbjct: 109 GAIDDIPAGQWEAARALDFNRGDTWRRIILPQALKPMLPVLGNYLIGMFKETPL 162 >gi|282862285|ref|ZP_06271347.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] gi|282562624|gb|EFB68164.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] Length = 291 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 95/172 (55%), Gaps = 7/172 (4%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q + I+ TL + ++ V SL++G +AV R+ + L F + +FR PLL+ + Sbjct: 61 QNIADGILATLKVFGLAAVGSLVLGVVLAVGRLSDHKPVRWLATGF-IELFRSIPLLITI 119 Query: 75 FVIFYGLPHIGIVFD-SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 + I+ +G + D S A+ L++ +E++R+ + S+PKGQ +A+YA+G+++ Sbjct: 120 YAIW-----VGFLTDYSMWALAAGLSVYNGCVQAEVLRAGVNSVPKGQSEAAYALGMSKT 174 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 Q + +++PQ + + S+ + LK TS+ I PE+ +A+ I S T Sbjct: 175 QVMVGVLIPQAVRAMLPTIISQLVVTLKDTSLGYIILYPELLNSARLIASNT 226 >gi|261823405|ref|YP_003261511.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261607418|gb|ACX89904.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 434 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 73/117 (62%) Query: 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 V F A+++ + L SA+I+EI+R+ I SIPKGQ +A+ A+ + +RHII+PQ + Sbjct: 299 VSPEFTALLLGIALYSSAFIAEIVRAGIQSIPKGQLEAARALSFSPWHMMRHIIIPQAMR 358 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 PL+S+++S+ K++S+A + PE+ + +++ T Q L + + VYL ++ Sbjct: 359 VIVPPLTSQYVSLSKNSSIAVVVGYPELANISNTLMNQTGQALEVIAIMMVVYLTVS 415 >gi|238759570|ref|ZP_04620732.1| ABC-type amino acid transport system permease component [Yersinia aldovae ATCC 35236] gi|238702229|gb|EEP94784.1| ABC-type amino acid transport system permease component [Yersinia aldovae ATCC 35236] Length = 251 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 104/201 (51%), Gaps = 3/201 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ +FP +TL I+ ++ V S I+G + V + S + + ++ + Sbjct: 9 NWTYLLWGTFPDGPLGGAALTLLISLLAGVASAILGTALGV-ALAMSRGVWAGVLAAVLG 67 Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FR P+++ +F ++ LP + G+ ++ +L L SAY++ +++ II+I GQW Sbjct: 68 FFRAIPVIMLIFWTYFLLPMVFGVDIPEITTVVCALALIASAYLAHAVKAGIIAIGAGQW 127 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRI 181 A ++G R Q + ++LPQ + +++IS++K TS+A + + E+ F Q Sbjct: 128 QAGLSLGFNRWQVLWFVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQVN 187 Query: 182 VSTTYQPLIIYCELAFVYLIL 202 + P+ ++ +A VY +L Sbjct: 188 NRSMVYPMEVFLFVALVYFVL 208 >gi|269104575|ref|ZP_06157271.1| putative amino acid ABC transporter permease protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268161215|gb|EEZ39712.1| putative amino acid ABC transporter permease protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 319 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 54/156 (34%), Positives = 90/156 (57%), Gaps = 5/156 (3%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 + GTP +Q F+ +G P++ +++ + +I + L SAYI+EIIRS I SI KGQW+A Sbjct: 164 YNGTPNGLQTFL--FGTPNL---WENLFSGVICIGLLASAYIAEIIRSGIDSIEKGQWEA 218 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++GLT Q R++I PQ + PL+ +FISI+K +S+ S I+I E+ I ++ Sbjct: 219 ADSLGLTPLQRFRYVIFPQAFASVIPPLAGQFISIVKDSSIISLISIQELTFVGSEIANS 278 Query: 185 TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 + I+ + YL+L I+ +E +H Sbjct: 279 SGYIFEIWILVGLAYLVLCLSLSILFSYLEKRYLKH 314 >gi|331697743|ref|YP_004333982.1| polar amino acid ABC transporter inner membrane subunit [Pseudonocardia dioxanivorans CB1190] gi|326952432|gb|AEA26129.1| polar amino acid ABC transporter, inner membrane subunit [Pseudonocardia dioxanivorans CB1190] Length = 299 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 99/188 (52%), Gaps = 24/188 (12%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 +EW + L+ A++ TL ++ V+SL+ G A R M + Sbjct: 50 WEWLQF--RAIQLLIVDALLNTLSAFGVAAVLSLVFGAIFAAGR-----------MSDHA 96 Query: 63 WI----------FRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIR 111 W+ FR PLL+ +F++++G+ +G+ ++ ++++ L L + ++E+ R Sbjct: 97 WLRGPSTAIVEFFRAVPLLILIFILYFGVSQTLGLNLSTYWSLVLGLMLYNGSVLAEVFR 156 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 + + ++P+GQ +A+YA+GL + Q + +++LPQ++ + S+ + +LK T++ I Sbjct: 157 AGVRALPRGQSEAAYALGLRKTQVMTNVLLPQSLRAMLPTIVSQLVVVLKDTALGFIILY 216 Query: 172 PEIFQTAQ 179 PE+ A+ Sbjct: 217 PELLYQAR 224 >gi|313902270|ref|ZP_07835675.1| polar amino acid ABC transporter, inner membrane subunit [Thermaerobacter subterraneus DSM 13965] gi|313467421|gb|EFR62930.1| polar amino acid ABC transporter, inner membrane subunit [Thermaerobacter subterraneus DSM 13965] Length = 375 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 8/197 (4%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +++TL +A +S +G +A+ R+ S ++ + Y+ + RGTPL+V LF Sbjct: 168 GLILTLVLAVAGITLSFPLGVLLALGRVS-SLPVVRALSIAYIELVRGTPLMVVLFFSMT 226 Query: 80 GLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 LP + D L L +AY++E +R + +P+GQ +A+ A+GLT Q + Sbjct: 227 ALPLFLPPSVRPDLVTRAAAGLVLFTAAYVAEAVRGGLQGVPRGQVEAAQALGLTGTQAV 286 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST-TYQPLIIYCEL 195 IILPQ + L +FIS+ K TS+ + + E AQ ++S +Y L + E+ Sbjct: 287 LLIILPQALRAVIPALVGQFISLFKDTSLVAVWGLLEFVGVAQSVLSNPSY--LGRHVEM 344 Query: 196 -AFVYLILTSFCYIIQI 211 AFV + FCY + + Sbjct: 345 YAFVAAVYWVFCYGMSL 361 >gi|289671691|ref|ZP_06492581.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. syringae FF5] gi|330980535|gb|EGH78638.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 246 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 87/149 (58%), Gaps = 5/149 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V++ RG PLL+ +F ++ +P IG F ++ +L + SAY+ EIIR +I ++P Sbjct: 67 WVYVMRGIPLLMVIFWTYFLVPLLIGHNITGFTTMLCTLVVYQSAYLCEIIRGAIQALPT 126 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++AS A+G+ +T +ILPQ + + L S+FISI+K TS+ I + E+ A Sbjct: 127 GQYEASRALGMGYLRTTIWVILPQALYNALPSLISQFISIIKETSLGYVINVQEVTFAAN 186 Query: 180 RIVSTTY-QPLIIYCELAFVYLILTSFCY 207 +I + +P ++ LA Y +L CY Sbjct: 187 QINNQLLTKPFQVFFILAITYYVL---CY 212 >gi|257868426|ref|ZP_05648079.1| L-cystine transport system permease tcyM [Enterococcus gallinarum EG2] gi|257802590|gb|EEV31412.1| L-cystine transport system permease tcyM [Enterococcus gallinarum EG2] Length = 236 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 54/193 (27%), Positives = 105/193 (54%), Gaps = 14/193 (7%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV----------Q 73 TL +A + VI ++G IA+IR++ I++ ++ V + +G P+++ + Sbjct: 22 TLFMALTALVIGAVVGLIIALIRLY-RIKILAPVLQVIVTVLKGVPVVLVILALYLISAK 80 Query: 74 LFVIFYGLPHIGIVFDSFVAI---IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 F I+ H + F F + I +L+L + SEI R + ++ KGQ+DA+ +IG+ Sbjct: 81 QFDIWAESMHWTLRFKDFNMVWIAIAALSLMSAINSSEIFRGAFAAVKKGQFDAAKSIGM 140 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T Q IR ++LPQ S S+ IS++K++++AS +++ ++F A+ Y+ L Sbjct: 141 TNLQVIRRVLLPQAWPISLPMFSNLLISLVKASALASMVSVVDVFAAAKITAQQNYRFLE 200 Query: 191 IYCELAFVYLILT 203 Y +A +Y +++ Sbjct: 201 AYVAVAIIYWLIS 213 >gi|308234954|ref|ZP_07665691.1| Putative Glutamate transport ATP-binding protein gluA [Gardnerella vaginalis ATCC 14018] gi|311114261|ref|YP_003985482.1| ABC transporter permease [Gardnerella vaginalis ATCC 14019] gi|310945755|gb|ADP38459.1| ABC superfamily ATP binding cassette transporter, permease protein [Gardnerella vaginalis ATCC 14019] Length = 297 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 98/180 (54%), Gaps = 5/180 (2%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL--IMHFYVWIFRGTP 69 S P +L +++ L + + + I+G IAVIR S + L I FY I RG P Sbjct: 80 SLPSVLQG-LMLNLQVLVFAVIGVAILGTLIAVIRTSVSPMLFPLRAIAQFYTTIMRGIP 138 Query: 70 LLVQLFVIFYGLPHIGIVFDSFVAII--ISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 +LV L++I +G+P + + AI+ I++ +++SAY+ E++R+ + ++ + Sbjct: 139 MLVVLYLIGFGIPGLQLFGRIPPAILGTIAIVMSYSAYVGEVLRAGFEDVHPSMRASARS 198 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 +GLT QT+R +++P + A L ++FIS+ K + S + + + AQ V+T+Y Sbjct: 199 LGLTSGQTVRLVVIPLGLRKVAPALMNDFISMQKDAGLISVLGAVDAVRAAQISVATSYN 258 >gi|170720285|ref|YP_001747973.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169758288|gb|ACA71604.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 248 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 50/155 (32%), Positives = 88/155 (56%), Gaps = 15/155 (9%) Query: 39 GFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI---GI--------- 86 G + V+R + ++S I YV +FR PLLVQLF+ ++ +P + G+ Sbjct: 47 GSLLGVMRTV-PNRLVSGIATAYVELFRNVPLLVQLFIWYFLVPDLLPEGLQEWFKQDLN 105 Query: 87 -VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTI 145 + ++++I L L +A + E +R+ I ++P+GQ A+ A+G + Q +++LPQ Sbjct: 106 PTTSALISVVICLGLFTAARVCEQVRTGIQALPRGQEAAARAMGFSLPQIYNNVLLPQAY 165 Query: 146 TTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQ 179 PL+SEF+++ K++SVAS I + E+ QT Q Sbjct: 166 RIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200 >gi|118473702|ref|YP_887060.1| glutamate permease [Mycobacterium smegmatis str. MC2 155] gi|118174989|gb|ABK75885.1| glutamate permease [Mycobacterium smegmatis str. MC2 155] Length = 226 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 107/207 (51%), Gaps = 13/207 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I D + ++AA T+ + S V +LI+G +A +R+ +++ + YV + R T Sbjct: 3 IFDEYRDEIFAAFWTTIQLTVYSAVGALILGTVLAAMRLA-PVPVMNWMGTAYVNVVRNT 61 Query: 69 PLLVQLFVIFYGLPHI------------GIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 PL + + +G+ I +F ++ LT+ ++++ E IRS + + Sbjct: 62 PLTLIILFCSFGVGQTLRITLVDPNSPTSIADSNFRLAVLGLTVYTASFVCETIRSGVNT 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P GQ +A+ ++G T Q +R+I+LPQ +PL S I+++K+T++AS I + E Sbjct: 122 VPLGQAEAARSLGFTFGQNLRYILLPQAFRAVIIPLGSVLIALIKNTTIASAIGVAEAAL 181 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 + ++ T L + +A +++LT Sbjct: 182 LMKAMIENTAALLTVGTIMALGFILLT 208 >gi|85717303|ref|ZP_01048257.1| amino acid ABC transporter, inner membrane component [Nitrobacter sp. Nb-311A] gi|85695892|gb|EAQ33796.1| amino acid ABC transporter, inner membrane component [Nitrobacter sp. Nb-311A] Length = 506 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 15/218 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQ 73 L+ ++VTL ++ V S+ IG +A+ R + + LI F ++ +RG PL+ Sbjct: 293 LWGGLLVTLVVSVTGIVSSIPIGIALALGR----RSTLPLIRIFSIAFIEFWRGVPLITV 348 Query: 74 LFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LF Y LP D V ++I + L AY +E+IR + +IP GQ +A++A+GL Sbjct: 349 LFFATYMLPLFLPGNFTIDGLVRVLIGIALFAGAYNAEVIRGGLAAIPSGQAEAAHALGL 408 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ--TAQRIVSTTYQP 188 + +T I++PQ + L + FI++ K TS+ S + + ++ A P Sbjct: 409 SYWKTTGLIVMPQAVRNVIPGLVNSFIALFKDTSLVSIVALFDLLGILRASFADPAWATP 468 Query: 189 LIIYCELAFVYLILTSFCYII---QIKIESSVTQHTYS 223 ++ AF LI +FC+ + + +E + H + Sbjct: 469 TTLFTGFAFTGLIYFAFCFSMSRYSLFVEHRLNAHRRN 506 >gi|282865054|ref|ZP_06274107.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Streptomyces sp. ACTE] gi|282559977|gb|EFB65526.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Streptomyces sp. ACTE] Length = 214 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 107/220 (48%), Gaps = 13/220 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI---ISLIMH 59 + W + + DSFP LL VTL + +++ ++G IAV S + + +M Sbjct: 5 FNW-DAVGDSFP-LLLEGFRVTLLATVLGTLVAAVLGLAIAVAGRAPSRLVTVPVKAVME 62 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 F R TPLLVQL G + + I+ L ++++ Y SE+ R+ I +PK Sbjct: 63 F----VRATPLLVQLV----GAAAVFTSVEPLTIGIVVLGIHYATYTSEVYRAGIDGVPK 114 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A A+ L+ ++T + +ILPQ + L + IS+ K T + IT+ E+ A+ Sbjct: 115 GQWEACRALSLSPRRTWQAVILPQAVRNVLPALGNYAISMFKETPFLAVITVQEMVFEAR 174 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 + + + ++ ++L+ + ++ K+E + Sbjct: 175 KYGTDHFAYTEVFTLAGLIFLVASYPTSLLMRKLEKRLGH 214 >gi|188534471|ref|YP_001908268.1| Glutamate/aspartate transport system permease [Erwinia tasmaniensis Et1/99] gi|188029513|emb|CAO97390.1| Glutamate/aspartate transport system permease [Erwinia tasmaniensis Et1/99] Length = 225 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 58/188 (30%), Positives = 107/188 (56%), Gaps = 11/188 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 +++W + I+ + P L + +V+TL I + V +I G +AV+R+ S IS Y Sbjct: 3 QFDW-STIVPNLPWL-WNGMVITLQITFTAIVFGIIWGTMLAVMRLS-SFKPISWFAKIY 59 Query: 62 VWIFRGTPLLVQLFVIFYGLPH-----IGIVFDS---FVAIIISLTLNFSAYISEIIRSS 113 V +FR PL++ L + +P +G+ + ++ +++ +L +AY SEIIR+ Sbjct: 60 VNLFRSVPLVMVLLWFYLVVPSFLQQVLGLSPKTDIRLISAMVAFSLFEAAYYSEIIRAG 119 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I+SI +GQ +A+ A+G+TR Q+++ IILPQ L ++ I + + TS+ +++ + Sbjct: 120 ILSIARGQGNAALALGMTRWQSMQLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLAD 179 Query: 174 IFQTAQRI 181 F+TA I Sbjct: 180 FFRTADTI 187 >gi|86360052|ref|YP_471941.1| amino acid ABC transporter ATP-binding protein [Rhizobium etli CFN 42] gi|86284154|gb|ABC93214.1| probable amino acid ABC transporter, ATP-binding protein [Rhizobium etli CFN 42] Length = 591 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 115/233 (49%), Gaps = 32/233 (13%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EWF F + + + TL + ++ + I+G +A+ R+ S ++S + Y+W Sbjct: 67 EWF------FAEPVLVGLGRTLLLTALAAISGSILGTALALARVSKS-PLLSGLSWGYIW 119 Query: 64 IFRGTPLLVQLF----------VIFYGLPHIGIVF---------DSFVAIIISLTLNFSA 104 + R P++V L I G+P VF F A + LTLN SA Sbjct: 120 LLRSIPVIVLLLILNNLGYLYETIEIGIPFTDTVFIDYPTVQLLTPFAAAFLGLTLNQSA 179 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS-SEFISILKST 163 + +EI+R I+S+ GQ +A+ A+GL R++ I+LPQ + S +P +E I + KST Sbjct: 180 FFAEIVRGGILSVDHGQLEAAAALGLPRRRQAFRIVLPQAM-RSILPTGFNELIGLAKST 238 Query: 164 SVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 S+ + +PE+F T Q I + PL++ + YLI+ + + Q IE Sbjct: 239 SMVYVLALPELFYTVQVIYRRNLEVIPLLMVATV--WYLIIMTVLSVAQHYIE 289 >gi|99080305|ref|YP_612459.1| amino acid ABC transporter permease [Ruegeria sp. TM1040] gi|99036585|gb|ABF63197.1| Amino acid ABC transporter permease protein 3-TM region His/Glu/Gln/Arg/opine [Ruegeria sp. TM1040] Length = 268 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 91/169 (53%), Gaps = 18/169 (10%) Query: 53 IISLIMHFYVWIFRGTPLLVQL----FVIFYGLPHIGIVFDSFVAI-------------- 94 ++ + FYV + RG P++V L FV+ L + F+ + Sbjct: 79 VLRQVCRFYVEVVRGVPIIVLLLYVAFVLAPALVDLRNWLGGFLGLEDIRTRNFPLLWRA 138 Query: 95 IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSS 154 I++L + +SA+I+E+ R+ + S+P GQ +A+ A+GL+ + R ++ PQ I T PL + Sbjct: 139 IVALMIAYSAFIAEVFRAGLQSVPDGQIEAAKALGLSGWKRFRFVVFPQAIRTILPPLGN 198 Query: 155 EFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +F++++K +S+ S + + +I Q + ++ ++ Y +A +YL +T Sbjct: 199 DFVALVKDSSLVSVLGVLDITQLGKVTAASNFRYFETYNMVALIYLAMT 247 >gi|209966387|ref|YP_002299302.1| general L-amino acid transport system permease protein AapM [Rhodospirillum centenum SW] gi|209959853|gb|ACJ00490.1| general L-amino acid transport system permease protein AapM [Rhodospirillum centenum SW] Length = 365 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 9/217 (4%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIFRGT 68 +D P + + +TL +A + ++ +A+ R D ++ I Y+ RG Sbjct: 147 LDYVPTARWGGLPLTLALAVVGLAVAFPFSILLALGRT--GDLPVVKAICVVYIEAVRGV 204 Query: 69 PLLVQLFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 PL+ LF+ P G+ D + + L L +AY++E++R + +IPKGQ++A+ Sbjct: 205 PLISILFMASVMFPLFLPQGVTVDKLLRAQVGLILFAAAYLAEVVRGGLQAIPKGQYEAA 264 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 A+GL+ Q R IILPQ + PL + FI K TS+ I + ++ TA+ ++ Sbjct: 265 AALGLSYWQRTRLIILPQALGLVIPPLVNTFIGFFKDTSLVIIIGLMDLLSTAKTALTDP 324 Query: 186 YQPLIIYCELAFVYLILTSFCYII---QIKIESSVTQ 219 FV I +FC+ + + +E + +Q Sbjct: 325 AWRGFYKEAYLFVAAIYFTFCFALSRYSMHLERTFSQ 361 >gi|160899041|ref|YP_001564623.1| polar amino acid ABC transporter inner membrane protein [Delftia acidovorans SPH-1] gi|160364625|gb|ABX36238.1| polar amino acid ABC transporter, inner membrane subunit [Delftia acidovorans SPH-1] Length = 360 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 94/176 (53%), Gaps = 4/176 (2%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P L+ + +TL +A I+ + + +G +A+ R S +I ++ ++ RG PL+ Sbjct: 149 PSDLWGGLPLTLFLAVIACLAGVPLGILLALGR-RSSLPLIRILCTGFIEAVRGVPLITL 207 Query: 74 LFVIFYGLPHIGIV---FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LF + LP + D V I + L +AY++E+ R + ++P+GQ A+ A+G Sbjct: 208 LFFGAFVLPMLVPAQWRVDPMVRIAVCLAAFSAAYLAEVFRGGLQAVPQGQVMAAQAMGF 267 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 TR Q +RH++LPQ + + P S FI +K TS+ + + I +I + + +S + Sbjct: 268 TRVQVLRHVVLPQALRVTIAPTVSNFIGAVKDTSLVAIVNIYDITGSLKMAMSDPH 323 >gi|54309365|ref|YP_130385.1| putative ABC-type amino acid transport system, permease component [Photobacterium profundum SS9] gi|46913801|emb|CAG20583.1| putative ABC-type amino acid transport system, permease component [Photobacterium profundum SS9] Length = 365 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 102/195 (52%), Gaps = 6/195 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLF 75 L+ ++VTL IA + V+SL IG +A+ R SD II I Y+ I+RG PL+ LF Sbjct: 154 LWGGLLVTLVIAIVGIVVSLPIGVALALGRR--SDMPIIRSICTIYIEIWRGVPLITVLF 211 Query: 76 VIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 + LP + D +I + L +AY++E++R + +IP+GQ++A+ A+GL+ Sbjct: 212 MASVLLPLFLTSEMEMDKLFRALIGVVLFSAAYMAEVVRGGLQAIPRGQYEAADALGLSY 271 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +++ I+LPQ + + + + FI + K TS+ I + ++ Q S Sbjct: 272 WKSMYLIVLPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANSDPEWLGFST 331 Query: 193 CELAFVYLILTSFCY 207 FV L+ FC+ Sbjct: 332 ESYIFVALVFWVFCF 346 >gi|83941462|ref|ZP_00953924.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Sulfitobacter sp. EE-36] gi|83847282|gb|EAP85157.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Sulfitobacter sp. EE-36] Length = 431 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 64/192 (33%), Positives = 106/192 (55%), Gaps = 13/192 (6%) Query: 25 LPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV----IFYG 80 L + C+S +SL +G +A+ R S II LI ++ RG PL+ LFV + Y Sbjct: 230 LGVICVS--LSLPMGILLALGRQS-SLPIIKLICVVFIEFIRGVPLITLLFVANVVLAYF 286 Query: 81 LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 LP G FD + +II +T+ SAYI+E+IR + ++P+GQ++A+ ++GL Q +R II Sbjct: 287 LPP-GTNFDLILRVIIMITMFASAYIAEVIRGGLAALPRGQYEAADSLGLDYAQAMRLII 345 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR--IVSTTYQPLIIYCEL-AF 197 LPQ + S + + + + K T++ S I++ ++ + + ST + +Y EL F Sbjct: 346 LPQALKISIPGIVNVAVGLFKDTTLVSIISMFDLVGMIRGPILASTDWNG--VYWELWGF 403 Query: 198 VYLILTSFCYII 209 L+ CY I Sbjct: 404 AALLFFVVCYGI 415 >gi|209547562|ref|YP_002279480.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538806|gb|ACI58740.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 592 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 70/233 (30%), Positives = 115/233 (49%), Gaps = 32/233 (13%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EWF F + + + TL + ++ + I+G +A+ R+ S ++S + Y+W Sbjct: 67 EWF------FAEPVLVGLGRTLLLTVLAAISGSILGTALALARVSRS-PLLSGLSWGYIW 119 Query: 64 IFRGTPLLVQLF----------VIFYGLPHIGIVF---------DSFVAIIISLTLNFSA 104 + R P++V L I G+P VF F A + LTLN SA Sbjct: 120 LLRSIPVIVLLLILNNLGYLYETIKIGIPFTDTVFIDYPTVQLLTPFAAAFLGLTLNQSA 179 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLS-SEFISILKST 163 + +EI+R I+S+ GQ +A+ A+GL R++ I+LPQ + S +P +E I + KST Sbjct: 180 FFAEIVRGGILSVDHGQLEAAAALGLPRRRQAFRIVLPQAM-RSILPTGFNELIGLAKST 238 Query: 164 SVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 S+ + +PE+F T Q I + PL++ + YLI+ + I Q IE Sbjct: 239 SMVYVLALPELFYTVQVIYRRNLEVIPLLMVATV--WYLIIMTVLSIAQHYIE 289 >gi|159042876|ref|YP_001531670.1| glutamate/glutamine/aspartate/asparagine ABC transport system permease [Dinoroseobacter shibae DFL 12] gi|157910636|gb|ABV92069.1| glutamate/glutamine/aspartate/asparagine ABC transport system permease [Dinoroseobacter shibae DFL 12] Length = 432 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 52/150 (34%), Positives = 85/150 (56%), Gaps = 6/150 (4%) Query: 66 RGTPLLVQLFV----IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 RG PL+ LFV + Y LP G FD + +II +TL SAYI+E IR + ++P+GQ Sbjct: 269 RGVPLITLLFVASVMLAYFLPP-GTSFDLVLRVIIMITLFASAYIAEAIRGGLAALPRGQ 327 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 ++A ++GL Q++R IILPQ + S + + I + K T++ S I++ ++ Q Sbjct: 328 YEAGDSLGLDYWQSMRLIILPQALKISIPSIVNIAIGLFKDTTLVSIISMFDMLGMIQGP 387 Query: 182 VSTTYQPLIIYCE-LAFVYLILTSFCYIIQ 210 + ++ + +Y E L F ++ FCY I Sbjct: 388 ILSSTEWFGVYWELLGFAGVLFFVFCYGIS 417 >gi|49079084|gb|AAT49852.1| PA1257 [synthetic construct] Length = 215 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 100/198 (50%), Gaps = 4/198 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I ++ +I ++G ++R SL + + +FR PLL+Q FV+ Sbjct: 21 TLAITAMAMLIGTLLGVVFGLLRALLPRA--SLPLAALLDVFRSVPLLIQ-FVLLNSFKS 77 Query: 84 I-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 I G+ + +F + L + +AY +E++R ++S+P A+ ++GL+ +Q + HI+LP Sbjct: 78 ILGLDWSAFAVACLVLGVYAAAYCAEVVRGGVLSVPPSVRRAARSLGLSYRQDLFHIVLP 137 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + + +S++K TS+ I I E+ + +Q IV+ +PL + C VY ++ Sbjct: 138 MAARVAFPGWVNLTLSVMKDTSLVLWIGIVELLRASQTIVTRIQEPLFVLCIAGLVYYLM 197 Query: 203 TSFCYIIQIKIESSVTQH 220 + + ++E Q Sbjct: 198 SWVVARLGARLERRWQQG 215 >gi|332528857|ref|ZP_08404831.1| polar amino acid abc transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] gi|332041716|gb|EGI78068.1| polar amino acid abc transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] Length = 255 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 113/202 (55%), Gaps = 8/202 (3%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSD-----TIISLIMHFYVWIFRGTPLLVQLFVIF 78 T+ +A +S ++L+IG I V+R ++ + ++ + + +V FR PLLVQ+ + + Sbjct: 41 TVLVAVLSLCVALVIGTVIGVLRTLPNNVHGHPSRLARLANVWVEFFRNIPLLVQVILWY 100 Query: 79 YGLPHIGIVF-DSFVAIIISLTLNF--SAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 + +P + VF D+ +++ + L F S+ I+E +R+ I ++P+GQ A A+G + QT Sbjct: 101 HVVPVVFPVFADTPKLLLVVMGLGFFTSSRIAEQVRTGIQALPRGQRYAGMALGFSTWQT 160 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 R+++LP PL+SE ++I K++SVA ++I E+ AQ+ T + + +Y + Sbjct: 161 YRYVLLPMAFRIIVPPLTSESMNIFKNSSVAFAVSITELTFFAQQAGEETSRGIEVYLAV 220 Query: 196 AFVYLILTSFCYIIQIKIESSV 217 +Y+I I IE V Sbjct: 221 TLLYVISAFAINRIMAAIEKRV 242 >gi|262370796|ref|ZP_06064120.1| amino acid ABC transporter permease [Acinetobacter johnsonii SH046] gi|262314158|gb|EEY95201.1| amino acid ABC transporter permease [Acinetobacter johnsonii SH046] Length = 237 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 20/186 (10%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-----PHI 84 V+S+ IGF +AV I + + F+ +IFRGTPL VQL +I+ G+ H Sbjct: 31 VLSIAIGFVLAVPLSIARVSEHAFVRGPVWFFTYIFRGTPLYVQLLIIYTGIYSLEFVHA 90 Query: 85 GIVFDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 D F I++ LN +AY +EI +I SIP G+ +A+ A G++ + I Sbjct: 91 HERLDEFFREGLNCTILAFALNTAAYTTEIFAGAIRSIPYGEIEAAKAFGMSPWKRYTRI 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL-------IIY 192 I+P + + +E I +L +T++A T T+P+I + A+ + + TY ++Y Sbjct: 151 IIPSMLRRALPFYGNEVILMLHATTIAFTATVPDILKIARDVNAATYATFDAFGIAAVLY 210 Query: 193 CELAFV 198 LAF+ Sbjct: 211 ACLAFI 216 >gi|149005716|ref|ZP_01829455.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|303260099|ref|ZP_07346072.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP-BS293] gi|303261283|ref|ZP_07347231.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS292] gi|303263948|ref|ZP_07349869.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS397] gi|303265939|ref|ZP_07351835.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS457] gi|303268321|ref|ZP_07354118.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS458] gi|307126806|ref|YP_003878837.1| glutamine ABC transporter membrane-spanning permease [Streptococcus pneumoniae 670-6B] gi|147762656|gb|EDK69616.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|302637417|gb|EFL67904.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS292] gi|302638794|gb|EFL69256.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP-BS293] gi|302642159|gb|EFL72509.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS458] gi|302644523|gb|EFL74774.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS457] gi|302646353|gb|EFL76579.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS397] gi|306483868|gb|ADM90737.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae 670-6B] gi|332077037|gb|EGI87499.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17545] Length = 219 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 11/192 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +TL I+ I+ ++S IIG +AV+R + I+ +I Y+ R P L+ +F Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMR-NGKNPILRIISSIYIEFVRNVPNLLWIFT 74 Query: 77 IFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF +VF S A I + TL SA ++EIIR + ++ KGQ++A + G T Q Sbjct: 75 IF-------LVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQ 127 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYC 193 + +IILPQ I + S+F++++K TS+ S I + E+F +Q ++ ++P ++ Sbjct: 128 ILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFEPEQVFS 187 Query: 194 ELAFVYLILTSF 205 + LI SF Sbjct: 188 LYILIALIYFSF 199 >gi|145589172|ref|YP_001155769.1| polar amino acid ABC transporter, inner membrane subunit [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047578|gb|ABP34205.1| amino acid ABC transporter membrane protein 1, PAAT family [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 260 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 47/142 (33%), Positives = 86/142 (60%), Gaps = 3/142 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVA-IIISLTLNF--SAYISEIIRSSIISI 117 +V +FR P+LVQ+F+ ++ +P + + + +++SL L F SA I+E +R+ I S+ Sbjct: 86 WVELFRNIPILVQVFLWYHVIPAFILPLKALPSYLLVSLALGFFTSARIAEQVRAGIQSL 145 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 P GQ A+ A+GL Q+ R++ILP + PL+SE ++++K++SVA +++PE+ Sbjct: 146 PSGQRAAATALGLNTFQSYRYVILPMALRIVIPPLTSESMNLIKNSSVAFAVSVPELTLF 205 Query: 178 AQRIVSTTYQPLIIYCELAFVY 199 A + T + IY + +Y Sbjct: 206 AMQAQEETSHGVEIYLAVTILY 227 >gi|134295678|ref|YP_001119413.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia vietnamiensis G4] gi|134138835|gb|ABO54578.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia vietnamiensis G4] Length = 241 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 103/199 (51%), Gaps = 7/199 (3%) Query: 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP 69 + +FP ++L +A S V S ++G + V + L++ F + FR P Sbjct: 15 VGAFPDGPLGGAALSLVLAMASAVASALLGVALGVGMALARGPLRVLLLAF-IGFFRAIP 73 Query: 70 LLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 +L+ +F ++ +P H+ + ++ +L L AY++ + + I++ +GQ A Sbjct: 74 VLMLIFWTYFLMPMLLHMDV--PGLATVVCALALIGGAYLAHAVHAGIVAAGEGQRQAGL 131 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVSTT 185 ++GLTR QT+RH++LPQ I +++++++K TS+A + +PE+ F Q Sbjct: 132 SLGLTRWQTVRHVLLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNRLM 191 Query: 186 YQPLIIYCELAFVYLILTS 204 P I+ +A +YL+L + Sbjct: 192 VYPAPIFLFVAVLYLVLCT 210 >gi|222870369|gb|EEF07500.1| predicted protein [Populus trichocarpa] Length = 145 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 73/119 (61%), Gaps = 3/119 (2%) Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 F+A++ +L L +AY +EI+R+ + ++P+GQW+A+ A+G+ R Q +R ++LPQ + Sbjct: 13 EFLALVGALGLYAAAYCAEIVRAGLQAVPRGQWNAASALGMRRGQQLRLVVLPQALRVII 72 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL---ILTSF 205 P ++ +S +K++S+A I P++ A +S T Q + +A VYL +LTS Sbjct: 73 PPYTNLALSTIKNSSLAVAIGYPDVVMVANTAMSQTGQAIECVTIIAVVYLAINLLTSL 131 >gi|225860605|ref|YP_002742114.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae Taiwan19F-14] gi|225727812|gb|ACO23663.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae Taiwan19F-14] gi|327390342|gb|EGE88683.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA04375] Length = 219 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 11/192 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +TL I+ I+ ++S IIG +AV+R + I+ +I Y+ R P L+ +F Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMR-NGKNPILRIISSIYIEFVRNVPNLLWIFT 74 Query: 77 IFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF +VF S A I + TL SA ++EIIR + ++ KGQ++A + G T Q Sbjct: 75 IF-------LVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQ 127 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYC 193 + +IILPQ I + S+F++++K TS+ S I + E+F +Q ++ ++P ++ Sbjct: 128 ILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFEPEQVFS 187 Query: 194 ELAFVYLILTSF 205 + LI SF Sbjct: 188 LYILIALIYFSF 199 >gi|212709680|ref|ZP_03317808.1| hypothetical protein PROVALCAL_00728 [Providencia alcalifaciens DSM 30120] gi|212687491|gb|EEB47019.1| hypothetical protein PROVALCAL_00728 [Providencia alcalifaciens DSM 30120] Length = 246 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 59/242 (24%), Positives = 116/242 (47%), Gaps = 34/242 (14%) Query: 17 LYAAIVVTLPIACISFVISLIIG-FFIAVIRIFFSDTIISLIMHFYVWIFRGTP-LLVQL 74 L +A +T+ +A + ++ L++ F A + F ++ + +V + RG P LLV L Sbjct: 7 LASAAGITVGLAVSALILGLVLAMLFTAWESVRFKP--LAFLGTCWVTLIRGLPELLVVL 64 Query: 75 FVIFYGLPHIGIVFDS------------------------------FVAIIISLTLNFSA 104 FV F L I ++ D F +I+L L +++ Sbjct: 65 FVYFGTLQLINLLGDGIAINLGFWQGTFQIDPSIFFADSGEFDYTPFFCGVIALALLYAS 124 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 Y S+ +R ++ ++P GQW+A A+GL+++ I+PQ + L ++++ +LK T+ Sbjct: 125 YASQTLRGALKAVPYGQWEAGLALGLSKRTIFFRYIMPQMWRHALPGLGNQWLVLLKDTA 184 Query: 165 VASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 + S I++ ++ + IV+ T++P Y + +YL +T ++ +IE T+ S Sbjct: 185 LVSLISVNDLMLQTKTIVNRTHEPFTWYAIVGLIYLAITLLSQLVLKRIELRTTRFERSD 244 Query: 225 DK 226 K Sbjct: 245 AK 246 >gi|330970030|gb|EGH70096.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 329 Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 24/211 (11%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY----------GLPHI 84 S+I+G +A+ R+ S + +L Y+W FR P L+ L +++ G+P Sbjct: 98 SIILGTALALARLSGSPLLAALAWG-YIWFFRSMPALLVLIILYNFAYLYDHIVLGVPFT 156 Query: 85 GIVF---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +VF F ++ L+L SAY +EIIR +I + GQ +A+ A+GL + Sbjct: 157 QLVFAEWSTVDVLSQFTVAVLGLSLMQSAYTAEIIRGGLIGVDAGQHEAAAALGLPASRR 216 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYC 193 I IILPQ + + +E I ++K TS+ + +PE+F T Q I + T PL+I Sbjct: 217 IFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVA 276 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 + YLI+T+ Q +E + + V Sbjct: 277 TV--WYLIITTVLTSAQYYVERHFARGSARV 305 >gi|293364949|ref|ZP_06611666.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] gi|307703200|ref|ZP_07640146.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus oralis ATCC 35037] gi|291316399|gb|EFE56835.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] gi|307623275|gb|EFO02266.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus oralis ATCC 35037] Length = 219 Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 61/193 (31%), Positives = 105/193 (54%), Gaps = 14/193 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +TL I+ I+ V+S +IG +AV+R + I+ +I Y+ R P L+ +F Sbjct: 16 IFKGFGLTLYISLIAIVLSTLIGTVLAVMR-NGKNPILRIISSIYIEFVRNVPNLLWIFT 74 Query: 77 IFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF +VF S A I + TL SA ++EIIR + ++ KGQ++A + G T Q Sbjct: 75 IF-------LVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQ 127 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQP---LI 190 + +IILPQ I + S+F++++K TS+ S I + E+F +Q ++ ++P Sbjct: 128 ILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFEPEQVFS 187 Query: 191 IYCELAFVYLILT 203 +Y +A +Y I Sbjct: 188 LYILIALIYFIFN 200 >gi|70730424|ref|YP_260165.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68344723|gb|AAY92329.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 236 Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 11/194 (5%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL + S + ++ +A++R ++ + + ++FRGTPL +QL + + Sbjct: 22 GLAMTLWLLVASLAMGFVLSLPLAILRTS-HWALLRWPVQLFTYVFRGTPLYIQLLICYS 80 Query: 80 GLPHIGIVF----------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 GL I + D+ +++ TLN AY EI +I SIP G+ +A++A G Sbjct: 81 GLYGIAAIRQQPLLEAFFRDAMNCTLLAFTLNTCAYTVEIFAGAIRSIPYGEIEAAHAYG 140 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189 L+ + +ILP + + S+E I +L +TSVA T TIP+I + A+ + T+ Sbjct: 141 LSGWRLYWRLILPSALRRALPYYSNEVILMLHATSVAFTATIPDILKVARDANAATFMTF 200 Query: 190 IIYCELAFVYLILT 203 + +YL L+ Sbjct: 201 QAFGIAGLLYLGLS 214 >gi|254250414|ref|ZP_04943733.1| ABC-type amino acid transport system, permease component [Burkholderia cenocepacia PC184] gi|124879548|gb|EAY66904.1| ABC-type amino acid transport system, permease component [Burkholderia cenocepacia PC184] Length = 261 Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 7/169 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L A++V + I+ ++ + + G + + + I + YV +FR PLLV ++ Sbjct: 50 LGNAMLVNIGISALAIALGTLAGLVLGPLTLS-RLGIARVAARAYVQVFRNAPLLVLIYF 108 Query: 77 IFYGLP------HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 Y P H + F + + + L L SA +EI R +I SIP QWDA+ ++ Sbjct: 109 STYVFPFEIRFGHASLPFPDWFKVTLGLALPASANFAEIFRGAIQSIPHAQWDAARSLAF 168 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 +R Q R IILPQ + P + + SI +T++AS + + ++ TAQ Sbjct: 169 SRVQVFRWIILPQCVRRMLPPWMNLYASITMATALASLVGVHDLLDTAQ 217 >gi|212711636|ref|ZP_03319764.1| hypothetical protein PROVALCAL_02711 [Providencia alcalifaciens DSM 30120] gi|212685738|gb|EEB45266.1| hypothetical protein PROVALCAL_02711 [Providencia alcalifaciens DSM 30120] Length = 250 Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 52/220 (23%), Positives = 118/220 (53%), Gaps = 22/220 (10%) Query: 6 FNLIIDSFPQLLYAA------------IVVTLPIACISFVISLIIGFFIAVIRIFFSDTI 53 F++I D++ LL+ A +++++ S V+ + G +A++R F+ + + Sbjct: 3 FSVITDNWQYLLFGAYPDGPLEGAALTLIMSVLAGAASIVLGTLGGIALAMLRGFWMN-L 61 Query: 54 ISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRS 112 + ++ F FR P+++ +F ++ LP + G A++ +L L SAY++ +++ Sbjct: 62 FAAVLGF----FRAIPVIMLIFWTYFLLPIVFGTEIPGVTAVVCALALITSAYLAHGVKA 117 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 I++I +GQW+A ++G R Q + +++LPQ + +++++++K TS+A + + Sbjct: 118 GILAIGQGQWNAGLSLGFNRWQVLWNVVLPQALRMMVPSFINQWVALIKDTSLAYIVGVA 177 Query: 173 EI-FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 E+ F Q PL ++ +AF+Y ++ C ++I Sbjct: 178 ELSFLATQVNNREMIYPLEVFLFVAFIYFVM---CLSVEI 214 >gi|184155297|ref|YP_001843637.1| ABC transporter permease component [Lactobacillus fermentum IFO 3956] gi|183226641|dbj|BAG27157.1| ABC transporter permease component [Lactobacillus fermentum IFO 3956] Length = 223 Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 59/193 (30%), Positives = 108/193 (55%), Gaps = 15/193 (7%) Query: 1 MKYEWFNLIID--SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIM 58 M + N++++ +F +L+ + V+ IA +S LI+G V+R S ++ I+ Sbjct: 1 MAHSGINVLLEGSNFSRLM-GGLWVSAWIAVVSLFFGLIVGTVFGVLRTTKSR-VLRFIL 58 Query: 59 HFYVWIFRGTPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 Y+ IFR P +V LF+ +Y LP HI + D +++ +L +A S+I+R +I Sbjct: 59 RLYLEIFRIIPTVVLLFLAYYILPRQLHINMPADWMA--VLAFSLWVAAEFSDIVRGAIQ 116 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTIT---TSAVPLSSEFISILKSTSVASTITIP 172 S+P+ Q ++ AIGLTR Q R+I+LPQ + +A+ L++ ++K+TS+ I+I Sbjct: 117 SVPQHQRESGLAIGLTRFQLFRYILLPQAMKLEVPAAINLATR---VVKTTSLLMIISIM 173 Query: 173 EIFQTAQRIVSTT 185 ++ Q+I+ Sbjct: 174 DVINVGQQIIEAN 186 >gi|148983987|ref|ZP_01817306.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] gi|225856306|ref|YP_002737817.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae P1031] gi|147924134|gb|EDK75246.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] gi|225724961|gb|ACO20813.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae P1031] gi|301799653|emb|CBW32213.1| putative amino acid ABC transporter, permease protein [Streptococcus pneumoniae OXC141] Length = 219 Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 11/192 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +TL I+ I+ ++S IIG +AV+R + I+ +I Y+ R P L+ +F Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMR-NGKNPILRIISSIYIEFVRNVPNLLWIFT 74 Query: 77 IFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF +VF S A I + TL SA ++EIIR + ++ KGQ++A + G T Q Sbjct: 75 IF-------LVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQ 127 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYC 193 + +IILPQ I + S+F++++K TS+ S I + E+F +Q ++ ++P ++ Sbjct: 128 ILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFEPEQVFS 187 Query: 194 ELAFVYLILTSF 205 + LI SF Sbjct: 188 LYILIALIYFSF 199 >gi|76811247|ref|YP_332657.1| histidine transport system permease [Burkholderia pseudomallei 1710b] gi|76580700|gb|ABA50175.1| histidine transport system permease protein [Burkholderia pseudomallei 1710b] Length = 492 Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 17/211 (8%) Query: 5 WFN-LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W N L D + + + +T+ + +S I + +AV R+ + + Y + Sbjct: 264 WRNYLYTDGY---RFTGLAITMWLLVVSIGIGFCLSVPLAVARVSKKKWLAGAVW-LYTY 319 Query: 64 IFRGTPLLVQLFVIFYGL---------PHIGIVF-DSFVAIIISLTLNFSAYISEIIRSS 113 +FRGTPL VQL + + GL P + F D +++ TLN AY +EI + Sbjct: 320 VFRGTPLYVQLLLCYTGLYSLQAVRGTPMLDAFFRDGMNCTLLAFTLNTCAYTTEIFAGA 379 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIP 172 I + G+ +A+ A G++ R I+LP + A+PL S+E I +L +T+VA T T+P Sbjct: 380 IKATSYGEIEAARAYGMSTFTLYRRIVLPSALR-RALPLYSNEVILMLHATTVAFTATVP 438 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +I + A+ + S TY + A +YL ++ Sbjct: 439 DILKIARDVNSATYMSFHAFGIAALLYLAIS 469 >gi|330891011|gb|EGH23672.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. mori str. 301020] Length = 246 Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 87/149 (58%), Gaps = 5/149 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V++ RG PLL+ +F ++ +P IG F ++ +L + SAY+ EIIR +I ++P Sbjct: 67 WVYVMRGIPLLMVIFWTYFLVPLLIGHNITGFTTMLCTLVVYQSAYLCEIIRGAIQALPA 126 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++AS ++G+ +T +ILPQ + + L S+FISI+K TS+ I + E+ A Sbjct: 127 GQYEASRSLGMGYMRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINVQEVTFAAN 186 Query: 180 RIVSTTY-QPLIIYCELAFVYLILTSFCY 207 +I + +P ++ LA Y +L CY Sbjct: 187 QINNQLLTKPFQVFFILAITYYVL---CY 212 >gi|313836987|gb|EFS74701.1| ABC transporter, permease protein [Propionibacterium acnes HL037PA2] gi|314929423|gb|EFS93254.1| ABC transporter, permease protein [Propionibacterium acnes HL044PA1] gi|314971493|gb|EFT15591.1| ABC transporter, permease protein [Propionibacterium acnes HL037PA3] gi|328906825|gb|EGG26591.1| ABC-type transport system, permease protein [Propionibacterium sp. P08] Length = 314 Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 25/202 (12%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGL-----P--H 83 + ++ + +A++R + ++ + Y+++FRG P+ QL +F+GL P Sbjct: 74 AMLLGTAVALLMAIMRQS-RNPVLRGVSWAYIFVFRGVPVYTQL--VFWGLLAVLYPTLS 130 Query: 84 IGIVFD--------------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +G+ F + A II L LN AY++EI RS + S+ GQ +A+ A+G Sbjct: 131 VGVPFGGPQLASLETEKIVTALAAAIIGLGLNEGAYLAEITRSGLESVDAGQTEAAKALG 190 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA-QRIVSTTYQP 188 + +R +I+PQ + PL +E I +LK+TS+ + Q A I + Y P Sbjct: 191 MKPSLIMRRVIIPQAMRVIIPPLGNETIGMLKTTSLVLAVPFTLDLQYATSAIANRIYAP 250 Query: 189 LIIYCELAFVYLILTSFCYIIQ 210 + + AF YL++TS + Q Sbjct: 251 IPLLIVAAFWYLVMTSVLMVGQ 272 >gi|167897973|ref|ZP_02485375.1| histidine transport system permease protein [Burkholderia pseudomallei 7894] Length = 235 Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 10/162 (6%) Query: 51 DTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFD----------SFVAIIISLTL 100 + +S + Y ++FRGTPL VQL + + G+ + +V D + +++ TL Sbjct: 50 NRAVSGAVWLYTYVFRGTPLYVQLLLCYTGIYSLSVVHDHAWLDSFFRSAMNCTLLAFTL 109 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 N AY +EI +I S G+ +A A G++R + +ILP + + S+E I +L Sbjct: 110 NECAYATEIFAGAIKSTAPGEIEAGLAYGMSRFKLYTRVILPSALRRALPSYSNEVILML 169 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 +T++A T T+P+I + + + S TY Y A +Y ++ Sbjct: 170 HATTLAFTATVPDILKVTRDVNSATYASFQAYGIAAALYAVV 211 >gi|66046122|ref|YP_235963.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63256829|gb|AAY37925.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] Length = 329 Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 24/211 (11%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY----------GLPHI 84 S+I+G +A+ R+ S + +L Y+W FR P L+ L +++ G+P Sbjct: 98 SIILGTALALARLSGSPLLAALAWG-YIWFFRSMPALLVLIILYNFAYLYDHIVLGVPFT 156 Query: 85 GIVF---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +VF F ++ L+L SAY +EIIR +I + GQ +A+ A+GL + Sbjct: 157 QLVFAEWSTVDVLSQFTVAVLGLSLMQSAYTAEIIRGGLIGVDAGQHEAAAALGLPASRR 216 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYC 193 I IILPQ + + +E I ++K TS+ + +PE+F T Q I + T PL+I Sbjct: 217 IFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVA 276 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 + YLI+T+ Q +E + + V Sbjct: 277 TV--WYLIITTVLTSAQYYVERHFARGSARV 305 >gi|37676942|ref|NP_937338.1| arginine transporter permease subunit ArtQ [Vibrio vulnificus YJ016] gi|37201486|dbj|BAC97308.1| ABC-type arginine transport system, permease component [Vibrio vulnificus YJ016] Length = 229 Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 102/181 (56%), Gaps = 10/181 (5%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIM---HFYVWIFRGTPLLVQLFVIFYGLPHI----- 84 ++SL +G +AV+ T L+ V + RG P L+ + I++G + Sbjct: 22 LVSLAVGLVLAVVFAGGEMTRHPLVKWPTTALVTVLRGLPELLVVLFIYFGSTQVLFLLT 81 Query: 85 G--IVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 G I F++ +I+L+L F++Y S+ IR ++ ++ KGQ +A+ A+G+++ +T I+LP Sbjct: 82 GDFIEVSPFLSGVIALSLIFASYASQTIRGALKAVNKGQREAASALGMSKSRTFFRIVLP 141 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + + L+++++ +LK T++ S I + ++ + AQ + T++ Y A +YL++ Sbjct: 142 QAVRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVI 201 Query: 203 T 203 T Sbjct: 202 T 202 >gi|10954672|ref|NP_066607.1| hypothetical protein pRi1724_p027 [Agrobacterium rhizogenes] gi|10567336|dbj|BAB16145.1| riorf26 [Agrobacterium rhizogenes] Length = 220 Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 18/199 (9%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF----RGTPLLVQLF 75 I V+L +A VI ++ F+ + R+ ++ + F WIF R P++ LF Sbjct: 13 GIPVSLGVAVGGIVIGCVLACFLVMARLSRNN-----VSRFLSWIFLEIIRCIPMIALLF 67 Query: 76 VIFYGLPHIGIVFDSFV---------AIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 +++YGL V S II+L+L AYISEI R I+S+P+G+ A+ Sbjct: 68 LLYYGLSQFSAVRSSIFWPILREPLWCAIIALSLKACAYISEIYRIGIMSVPEGEILAAR 127 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 + G + R II+ LS+EF+ ++K++S+AS IT+ +I A + S + Sbjct: 128 SFGFKGFRLYRSIIVSHAARIVLPALSNEFVVLIKASSLASLITLMDITGLASGLASELF 187 Query: 187 QPLIIYCELAFVYLILTSF 205 QPL A YL+ + Sbjct: 188 QPLPALTVAAIYYLVFNTL 206 >gi|332358957|gb|EGJ36778.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK49] Length = 226 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 75/124 (60%), Gaps = 3/124 (2%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYI 106 ++ + +V ++ TPLLVQ ++FYGLP + I+ + ++ + L AYI Sbjct: 50 KHKVLRGLARVFVEFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYI 109 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +E+IRS I SIP+GQ +A+ + G T +T+R+IILPQ PL ++ ++++K+TS Sbjct: 110 AEVIRSGIQSIPRGQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTV 169 Query: 167 STIT 170 + I+ Sbjct: 170 AIIS 173 >gi|307941624|ref|ZP_07656979.1| glutamine transport system permease protein GlnP [Roseibium sp. TrichSKD4] gi|307775232|gb|EFO34438.1| glutamine transport system permease protein GlnP [Roseibium sp. TrichSKD4] Length = 265 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 108/201 (53%), Gaps = 23/201 (11%) Query: 23 VTLPIACISFVISLIIGFFIAVIRI--FFSDTIISLIMHFYVWIFRGTPLLVQL-FVIFY 79 +T+ + + F ++ +G +AV + F + + + FY+ + RG P+LV L ++ F Sbjct: 49 ITIFVTLVGFSLASALGLVLAVASLSRFLA---VRQVARFYIEVVRGLPILVLLLYIAFV 105 Query: 80 GLPHIGIVFDSFVA-----------------IIISLTLNFSAYISEIIRSSIISIPKGQW 122 P + + ++ + I++LT+ +SA+I+E+ R+ I ++ KGQ Sbjct: 106 AAPLVIALINAIIEPLGMDPLRTRDFPLIWRAILALTIGYSAFIAEVFRAGIQAVDKGQI 165 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A+G++ R I+ PQ + T PL ++F++++K +S+ S + + +I Q + Sbjct: 166 EAAKALGMSGWLRFRLIVFPQALRTILPPLGNDFVAMIKDSSLVSVLGVADITQLGKVYA 225 Query: 183 STTYQPLIIYCELAFVYLILT 203 + +++ Y +AF+YL +T Sbjct: 226 AGSFRFFETYNVVAFIYLTMT 246 >gi|299769349|ref|YP_003731375.1| Histidine transport system permease protein hisM [Acinetobacter sp. DR1] gi|298699437|gb|ADI90002.1| Histidine transport system permease protein hisM [Acinetobacter sp. DR1] Length = 237 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 22/187 (11%) Query: 33 VISLIIGFFIAVIRIFFSDTIISLIMHFYVW----IFRGTPLLVQLFVIFYGL-----PH 83 V+S+ IGF +AV + + +L + VW +FRGTPL +QL +I+ G+ H Sbjct: 31 VLSIGIGFVLAV-PLSLARVSENLWLRGPVWLFTYVFRGTPLYIQLLIIYSGIYSFDYVH 89 Query: 84 IGIVFDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 D+F I++ LN AY +EI +I SIP G+ +A+ A G+++ + Sbjct: 90 EHQTLDAFFREGINCTILAFALNTGAYTTEIFAGAIRSIPHGEIEAAQAFGMSKWKLYTR 149 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL-------II 191 II+P + + +E I +L +T++A T T+P+I + A+ + + TY ++ Sbjct: 150 IIIPSMLRRALPFYGNEVILMLHATTIAFTATVPDILKIARDVNAATYDTFNAFGIAAVL 209 Query: 192 YCELAFV 198 Y LAF+ Sbjct: 210 YAMLAFI 216 >gi|149010775|ref|ZP_01832146.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP19-BS75] gi|147765256|gb|EDK72185.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP19-BS75] Length = 219 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 11/192 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +TL I+ I+ ++S IIG +AV+R + I+ +I Y+ R P L+ +F Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMR-NGKNPILRIISSIYIEFVRNVPNLLWIFT 74 Query: 77 IFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF +VF S A I + TL SA ++EIIR + ++ KGQ++A + G T Q Sbjct: 75 IF-------LVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQ 127 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYC 193 + +IILPQ I + S+F++++K TS+ S I + E+F +Q ++ ++P ++ Sbjct: 128 ILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFEPEQVFS 187 Query: 194 ELAFVYLILTSF 205 + LI SF Sbjct: 188 LYILIALIYFSF 199 >gi|330820726|ref|YP_004349588.1| binding-protein-dependent transport system inner membrane component [Burkholderia gladioli BSR3] gi|327372721|gb|AEA64076.1| binding-protein-dependent transport system inner membrane component [Burkholderia gladioli BSR3] Length = 243 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 28/206 (13%) Query: 9 IIDSF--PQ---LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 + DSF P+ L+ VTL +A + + S +G +A+ + + Y+ Sbjct: 1 MFDSFLAPKYLLWLWQGFGVTLGLALAAGLSSTCLGAALALAGRSRWRAVRG-VARLYIG 59 Query: 64 IFRGTPLLVQLFVIFYG----LPHIGIVFDS------------------FVAIIISLTLN 101 FR TPLLVQLF ++G LP I + + F+A + L+ Sbjct: 60 AFRNTPLLVQLFFWYFGAATLLPDEAIAWLNAQHVLPTPAGALRWPSFEFLAGWLGLSCY 119 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 +A+++ S I + +GQW A+ A+GLT Q RHI+LPQ + + PL ++++++K Sbjct: 120 TAAFVAGEFASGIAGVREGQWQAAAALGLTPWQAFRHIVLPQAVRIALPPLFGQYMNLVK 179 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQ 187 ++S+ I + E+ ++++ + +++ Sbjct: 180 NSSLTMAIGLAELSYASRQVETESFR 205 >gi|114706425|ref|ZP_01439327.1| probable general l-amino acid transport permease abc transporter protein [Fulvimarina pelagi HTCC2506] gi|114538286|gb|EAU41408.1| probable general l-amino acid transport permease abc transporter protein [Fulvimarina pelagi HTCC2506] Length = 400 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 72/111 (64%) Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 FVA+ ++L+L +A+I+EI+R+ I+S+ KGQ +AS A+GL R T+R +I+PQ Sbjct: 268 EFVALFLALSLYTAAFIAEIVRAGILSVSKGQTEASSALGLRRGLTLRLVIVPQAFRVII 327 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 PL+S++++++K++S+ I PE+F +++ + Q + I VYL Sbjct: 328 PPLTSQYLNLIKNSSLGLAIGYPELFAIGTTVLNQSGQSIEIIVICMGVYL 378 >gi|83854939|ref|ZP_00948469.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Sulfitobacter sp. NAS-14.1] gi|83842782|gb|EAP81949.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Sulfitobacter sp. NAS-14.1] Length = 431 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 64/192 (33%), Positives = 106/192 (55%), Gaps = 13/192 (6%) Query: 25 LPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV----IFYG 80 L + C+S +SL +G +A+ R S II LI ++ RG PL+ LFV + Y Sbjct: 230 LGVICVS--LSLPMGILLALGRQS-SLPIIKLICVVFIEFIRGVPLITLLFVANVVLAYF 286 Query: 81 LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 LP G FD + +II +T+ SAYI+E+IR + ++P+GQ++A+ ++GL Q +R II Sbjct: 287 LPP-GTNFDLILRVIIMITMFASAYIAEVIRGGLAALPRGQYEAADSLGLDYAQAMRLII 345 Query: 141 LPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR--IVSTTYQPLIIYCEL-AF 197 LPQ + S + + + + K T++ S I++ ++ + + ST + +Y EL F Sbjct: 346 LPQALKISIPGIVNVAVGLFKDTTLVSIISMFDLVGMIRGPILASTDWNG--VYWELWGF 403 Query: 198 VYLILTSFCYII 209 L+ CY I Sbjct: 404 AALLFFVVCYGI 415 >gi|293605349|ref|ZP_06687734.1| general amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292816288|gb|EFF75384.1| general amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 380 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 65/98 (66%) Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 FVA+ + LT+ SA+I+E++RS I ++ GQW+A+ ++GL R + +R ++LPQ + Sbjct: 248 EFVALFLGLTVYTSAFIAEVVRSGIQAVNNGQWEAAGSLGLPRAKVLRLVVLPQALRVII 307 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 P++S+++++LK++S+A I P+I ++ T Q Sbjct: 308 PPMTSQYLNLLKNSSLAVAIGYPDIVSVVNTTLNQTGQ 345 >gi|207722496|ref|YP_002252932.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2] gi|206587677|emb|CAQ18259.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2] Length = 223 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 100/197 (50%), Gaps = 8/197 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFF---SDTIISLIMHFYV 62 F ++ ++ P LL+ L + I VI + +G + + +++ + YV Sbjct: 5 FAVVAEAVPVLLHG-----LEVTAIVSVIGIPLGGLAGTLAAYAVQSRSRVLAGLARGYV 59 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + R P L+ +++ F+GLP +G+ + I L Y EI+R+++ S+P+GQ Sbjct: 60 AMVRNVPYLILVYLSFFGLPKLGVPASAMAVAIGCTALYTGGYFCEILRAALHSVPRGQS 119 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 A+ ++G++R Q R+I+ PQ + P +S I + K +++ S +++PE+ + + Sbjct: 120 GAALSLGMSRWQVQRYIVAPQLLGFLIPPTTSLVIMMFKDSAIFSVMSLPEMTYQSNLLT 179 Query: 183 STTYQPLIIYCELAFVY 199 + T+ + I A +Y Sbjct: 180 ANTFAYMEILATTAAIY 196 >gi|221201395|ref|ZP_03574434.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia multivorans CGD2M] gi|221208876|ref|ZP_03581874.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221171332|gb|EEE03781.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221178663|gb|EEE11071.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia multivorans CGD2M] Length = 246 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/217 (23%), Positives = 107/217 (49%), Gaps = 16/217 (7%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F +L+A V T+ ++ +S ++ +G AV ++ + ++ I Y + R P L Sbjct: 22 GFGPVLWAGTVQTIELSVLSLTTAVALGLIGAVAKLS-HNRVLRAIATGYTTLIRSVPDL 80 Query: 72 VQLFVIFY-------------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 V + ++FY G I I D FVA +++L + AY +E R + +++P Sbjct: 81 VLMLLLFYSIQIWLNQFTDLVGWTQIDI--DPFVAGVLTLGFIYGAYFTETFRGAFLAVP 138 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + A Sbjct: 139 RGQLEAGAAYGMSGARVFVRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAA 198 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q +T+ A +YL +T+ ++ I++E Sbjct: 199 QDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLEK 235 >gi|194016194|ref|ZP_03054808.1| L-cystine transport system permease protein TcyB [Bacillus pumilus ATCC 7061] gi|194011667|gb|EDW21235.1| L-cystine transport system permease protein TcyB [Bacillus pumilus ATCC 7061] Length = 236 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 14/194 (7%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP----LLVQLFVIFY 79 TL + + + + GF IA+IR F+ ++S + ++V IF+ P LLV + Sbjct: 22 TLLLGFLPLIFGSVFGFGIALIR-FYQVPVLSQLFKWFVAIFKAIPVVLILLVSYLLFSD 80 Query: 80 GLPHIGIVF---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L H+ D I +LTL + +SEI RSS+ SIPKGQ+DA+ ++G Sbjct: 81 SLDHLAASLSLQIRFSDLDRRWIAIFALTLYAVSGLSEIFRSSLASIPKGQFDAALSVGF 140 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLI 190 T KQ +R +I+PQ S L++ IS++K++S+ S +++ +I A + Y+ L Sbjct: 141 TSKQVLRRVIIPQVFPISLPLLNNMLISLIKASSLVSMVSVVDILNGALIKANVNYRYLE 200 Query: 191 IYCELAFVYLILTS 204 Y +A +Y L + Sbjct: 201 AYIAVALIYWALCA 214 >gi|332076440|gb|EGI86903.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA41301] Length = 219 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 11/192 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +TL I+ I+ ++S IIG +AV+R + I+ +I Y+ R P L+ +F Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMR-NGKNPILRIISSIYIEFVRNVPNLLWIFT 74 Query: 77 IFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF +VF S A I + TL SA ++EIIR + ++ KGQ++A + G T Q Sbjct: 75 IF-------LVFKIKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQ 127 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYC 193 + +IILPQ I + S+F++++K TS+ S I + E+F +Q ++ ++P ++ Sbjct: 128 ILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFEPEQVFS 187 Query: 194 ELAFVYLILTSF 205 + LI SF Sbjct: 188 LYILIALIYFSF 199 >gi|300697544|ref|YP_003748205.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum CFBP2957] gi|299074268|emb|CBJ53813.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum CFBP2957] Length = 233 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 56/198 (28%), Positives = 105/198 (53%), Gaps = 10/198 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++L + +TL IA S+++++++ F + IR+ S + + YV P L Sbjct: 14 EFSKMLIEGVWMTLVIAGSSWLLAMVLAFVLLGIRMVRSQ-LAERFVEAYVSYHCNVPTL 72 Query: 72 VQLFVIFYG------LPHIGIVFDSF---VAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 VQL ++G LP + + D V I++L L +AY SE +RS + +IP GQ Sbjct: 73 VQLMFWYFGISTLFPLPMLDWLADHHSEAVFSIVALGLCQAAYFSEDLRSGLRAIPPGQE 132 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A+G + T+R++++PQ + + L + +S+ K++S+A I + E+ + I Sbjct: 133 EAARALGNSFIGTLRYVLMPQAVRNALPALINHSVSLFKNSSLAMAIGVTELTHAVKEIE 192 Query: 183 STTYQPLIIYCELAFVYL 200 +T+++ Y VYL Sbjct: 193 NTSFRAFESYLLATVVYL 210 >gi|330825797|ref|YP_004389100.1| polar amino acid ABC transporter inner membrane subunit [Alicycliphilus denitrificans K601] gi|329311169|gb|AEB85584.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans K601] Length = 220 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 91/159 (57%), Gaps = 1/159 (0%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 A+++T + +SFV ++G + V+R+ + ++ YV IFR P + L I + Sbjct: 18 ALLLTWKLTVVSFVPGFLLGMVVTVLRLLPL-PPLRFVLTGYVEIFRNIPSVALLIFIVF 76 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 LP + +V D ++I++L L SA+ ++ +RS I +IP GQ +A+ ++GL + I + Sbjct: 77 ALPDLNVVIDYEPSVILTLALVCSAFTADYLRSGINTIPGGQIEAALSLGLRPMRIISAV 136 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +LPQ + P++S I+++ STS+AS + P TA Sbjct: 137 VLPQALRAVVQPMTSLLIALMLSTSLASQVPFPGRELTA 175 >gi|318057583|ref|ZP_07976306.1| putative amino acid ABC transporter permease protein [Streptomyces sp. SA3_actG] gi|318076838|ref|ZP_07984170.1| putative amino acid ABC transporter permease protein [Streptomyces sp. SA3_actF] Length = 213 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/220 (24%), Positives = 105/220 (47%), Gaps = 8/220 (3%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M YEW ++ + DSFP LL TL + +++ ++G +A+ + L + Sbjct: 1 MNYEWKWDAVSDSFP-LLLDGFWTTLLATVLGSLVAAVLGLLVAMAS--RGPAWVRLPVK 57 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 R TPLLVQL ++ + D II L ++++ Y+ E R+ I ++PK Sbjct: 58 AVTEFIRSTPLLVQLVGVYTLFGSV----DPLTLGIIVLGVHYATYMGEAYRAGIDAVPK 113 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQW+A+ A+ L+ +T ++LPQ + L + I++ K T + IT+ ++ A+ Sbjct: 114 GQWEAARALSLSPGRTWGAVVLPQAVRNVLPALGNYAIAMFKETPYLAVITVGDMVLHAR 173 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S + ++ ++L+ + ++ K+E + Sbjct: 174 EYGSAHFAYAEVFTLAGLIFLVASYPTSLLMRKLEKRLGH 213 >gi|50121082|ref|YP_050249.1| putative ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49611608|emb|CAG75056.1| putative ABC transporter, permease [Pectobacterium atrosepticum SCRI1043] Length = 314 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 111/209 (53%), Gaps = 26/209 (12%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY----------GLPHI 84 S+ G +A+ R+ S ++S + Y+W+FR PL++ L +++ G+P Sbjct: 88 SIFFGTALALARLSPS-YLLSTLSWLYIWLFRSLPLILVLIILYNFSYLYDELALGIPFT 146 Query: 85 GIVF---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I+F D F ++ LTL SAY +EIIR I+ + GQ++AS A+GL + Sbjct: 147 SIIFLRYPTIDLLDQFSVAVLGLTLVQSAYTAEIIRGGILGVDAGQFEASAALGLPGGRR 206 Query: 136 IRHIILPQTITTSAVPLS-SEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIY 192 IILPQ + S +P +E IS+ K TS+ + +PE+F T Q I + T Q PL++ Sbjct: 207 TVRIILPQAL-RSILPTGFNEIISLAKGTSIVYVLALPELFYTVQVIYNRTQQVIPLLMV 265 Query: 193 CELAFVYLILTSFCYIIQIKIESSVTQHT 221 + YL++T+ I+Q +E V++ Sbjct: 266 ATI--WYLLITTVLSIVQYYVERYVSRGA 292 >gi|330891010|gb|EGH23671.1| glutamine ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] Length = 233 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 107/211 (50%), Gaps = 10/211 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K++ ++ + +L+ I TL +A +++ +++ + + IR+ + L+ Y Sbjct: 4 KFDLSAILQGEYAELIVKGIETTLQLAFVAWCMAMAVALLLVSIRLTGNKYAERLVAG-Y 62 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 V R P LVQL + ++G+P + ++ +I+L L +AY SE IRS Sbjct: 63 VSYHRNVPTLVQLMLWYFGIPTLLTESTQLWLANYSTEYLFSVIALGLCQAAYFSEDIRS 122 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +IP GQ +AS A+GL +++R++ILPQ + L + + + K+TS+ I + Sbjct: 123 GLRAIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVV 182 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+ + + + T++ Y VYL ++ Sbjct: 183 ELTYATREVENYTFRTFEAYLVATVVYLTIS 213 >gi|15596454|ref|NP_249948.1| amino acid ABC transporter membrane protein [Pseudomonas aeruginosa PAO1] gi|107100706|ref|ZP_01364624.1| hypothetical protein PaerPA_01001733 [Pseudomonas aeruginosa PACS2] gi|9947189|gb|AAG04646.1|AE004555_6 amino acid ABC transporter membrane protein [Pseudomonas aeruginosa PAO1] Length = 214 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 100/197 (50%), Gaps = 4/197 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I ++ +I ++G ++R SL + + +FR PLL+Q FV+ Sbjct: 21 TLAITAMAMLIGTLLGVVFGLLRALLPRA--SLPLAALLDVFRSVPLLIQ-FVLLNSFKS 77 Query: 84 I-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 I G+ + +F + L + +AY +E++R ++S+P A+ ++GL+ +Q + HI+LP Sbjct: 78 ILGLDWSAFAVACLVLGVYAAAYCAEVVRGGVLSVPPSVRRAARSLGLSYRQDLFHIVLP 137 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + + +S++K TS+ I I E+ + +Q IV+ +PL + C VY ++ Sbjct: 138 MAARVAFPGWVNLTLSVMKDTSLVLWIGIVELLRASQTIVTRIQEPLFVLCIAGLVYYLM 197 Query: 203 TSFCYIIQIKIESSVTQ 219 + + ++E Q Sbjct: 198 SWVVARLGARLERRWQQ 214 >gi|332702268|ref|ZP_08422356.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio africanus str. Walvis Bay] gi|332552417|gb|EGJ49461.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio africanus str. Walvis Bay] Length = 220 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/163 (34%), Positives = 97/163 (59%), Gaps = 4/163 (2%) Query: 43 AVIRIFFSD-TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLN 101 A +RI SD +++L Y+++ RGTPLL+QL ++YGL + + + +++L ++ Sbjct: 41 AFLRI--SDKAVLNLPARGYIYVIRGTPLLLQLLFLYYGLRGT-LGLSALTSAMLALGVH 97 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 AYI EI R +I SI GQ +A+ ++G+T + + IILPQ + L ++FI LK Sbjct: 98 NGAYIGEIFRGAIGSIAPGQMEAARSLGMTYPRAMLRIILPQAFKRAVPALGNQFIIALK 157 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 +S+AS ITI E+ +Q++ S+ ++ + + A YLI T Sbjct: 158 DSSLASAITINELLLKSQQLASSNFRMMEMLTIAALFYLIYTG 200 >gi|327474724|gb|EGF20129.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK408] gi|327490281|gb|EGF22069.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1058] gi|328946748|gb|EGG40886.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1087] Length = 226 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 75/124 (60%), Gaps = 3/124 (2%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYI 106 ++ + +V ++ TPLLVQ ++FYGLP + I+ + ++ + L AYI Sbjct: 50 KHKVLRGLARVFVEFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYI 109 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +E+IRS I SIP+GQ +A+ + G T +T+R+IILPQ PL ++ ++++K+TS Sbjct: 110 AEVIRSGIQSIPRGQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQIVNLIKNTSTV 169 Query: 167 STIT 170 + I+ Sbjct: 170 AIIS 173 >gi|327470644|gb|EGF16100.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK330] Length = 226 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 75/124 (60%), Gaps = 3/124 (2%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYI 106 ++ + +V ++ TPLLVQ ++FYGLP + I+ + ++ + L AYI Sbjct: 50 KHKVLRSLARIFVEFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYI 109 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +E+IRS I SIP+GQ +A+ + G T +T+R+IILPQ PL ++ ++++K+TS Sbjct: 110 AEVIRSGIQSIPRGQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTV 169 Query: 167 STIT 170 + I+ Sbjct: 170 AIIS 173 >gi|15902576|ref|NP_358126.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6] gi|116516319|ref|YP_816030.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] gi|182683538|ref|YP_001835285.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] gi|303253932|ref|ZP_07340053.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS455] gi|15458107|gb|AAK99336.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae R6] gi|116076895|gb|ABJ54615.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] gi|182628872|gb|ACB89820.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] gi|301801476|emb|CBW34168.1| putative amino acid ABC transporter, permease protein [Streptococcus pneumoniae INV200] gi|302599108|gb|EFL66133.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS455] Length = 219 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 11/192 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +TL I+ I+ ++S IIG +AV+R + I+ +I Y+ R P L+ +F Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMR-NGKNPILRIISSIYIEFVRNVPNLLWIFT 74 Query: 77 IFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF +VF S A I + TL SA ++EIIR + ++ KGQ++A + G T Q Sbjct: 75 IF-------LVFKIKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQ 127 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYC 193 + +IILPQ I + S+F++++K TS+ S I + E+F +Q ++ ++P ++ Sbjct: 128 ILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFEPEQVFS 187 Query: 194 ELAFVYLILTSF 205 + LI SF Sbjct: 188 LYILIALIYFSF 199 >gi|330501774|ref|YP_004378643.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas mendocina NK-01] gi|328916060|gb|AEB56891.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina NK-01] Length = 230 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 107/206 (51%), Gaps = 10/206 (4%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFR 66 +++DS P L Y + TL + + + + G +A++R+ +S+ YV + R Sbjct: 8 GVVVDSLPYLFYTGMSFTLTLTLFATLGGIFFGSLLAIMRLS-RYRALSMFAGGYVNLLR 66 Query: 67 GTPLLVQLFVIFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISI 117 PL++ +F ++ +P + + D F + +I+ TL + Y EIIRS I S+ Sbjct: 67 SLPLVLVIFWFYFMVPFVVQWVTGAPRPVRIDPFWSSVITFTLFEACYFCEIIRSGIQSL 126 Query: 118 PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQT 177 PKGQ AS A+G+T +Q++ +++LPQ + + ++ I + + TS+ ++I + Sbjct: 127 PKGQTQASMALGMTGRQSLFYVVLPQALRNMLPLMLTQTIVLFQDTSLVYILSITDFLGA 186 Query: 178 AQRIVSTTYQPLIIYCELAFVYLILT 203 A +I + L +Y A VY +++ Sbjct: 187 AAKIAQRDGRLLEMYVFAALVYFVIS 212 >gi|190895402|ref|YP_001985694.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|190699347|gb|ACE93431.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 241 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 106/206 (51%), Gaps = 13/206 (6%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + LL A ++TL + + I ++G +A ++ + ++SL + Y +FRG P L Sbjct: 13 GWGALLILAALMTLAVTATALAIGAVLGAIVAGAKLSGNPLLVSL-GNVYTTVFRGVPEL 71 Query: 72 VQLFVIFYG----LPHIGIVFD--------SFVAIIISLTLNFSAYISEIIRSSIISIPK 119 + +++I++G + IG SF A +++ + +Y +E+ R + ++I K Sbjct: 72 LIIYLIYFGGSSAVTSIGKAMGYEGFLGLPSFAAGALAVGIISGSYQAEVFRGAYLAIAK 131 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G+ +A+ AIG+ R R II+PQ + + L + + LK +++ S + E+ +T+Q Sbjct: 132 GELEAASAIGMHRGMRFRRIIIPQVLRFAIPGLGNVWQLSLKDSALISVTGLAELMRTSQ 191 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSF 205 +T Q + + +YLILTS Sbjct: 192 VAAGSTRQYFLFFIAGGCLYLILTSL 217 >gi|114766876|ref|ZP_01445798.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Pelagibaca bermudensis HTCC2601] gi|114540922|gb|EAU43982.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Roseovarius sp. HTCC2601] Length = 438 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/148 (33%), Positives = 84/148 (56%), Gaps = 5/148 (3%) Query: 64 IFRGTPLLVQLF----VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 + RG PL+V LF ++ Y LP G FD + +II +TL SAYI+E++R + ++PK Sbjct: 274 VIRGVPLIVWLFTASLLLNYFLPP-GTNFDLMLRVIIMVTLFSSAYIAEVVRGGLAALPK 332 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ A+GL +++R IILPQ + S + + FI + K T++ I + + + Sbjct: 333 GQYEAADALGLDYWKSMRLIILPQALKISIPGIVNTFIGLFKDTTLVVFIGLLDPIGLSN 392 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCY 207 I ++T I + F+ L FC+ Sbjct: 393 AIRASTDWNGIYWELFVFIGLCFFIFCF 420 >gi|169833411|ref|YP_001694086.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae Hungary19A-6] gi|168995913|gb|ACA36525.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae Hungary19A-6] Length = 219 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/192 (31%), Positives = 105/192 (54%), Gaps = 11/192 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +TL I+ I+ ++S IIG +AV+R + ++ +I Y+ R P L+ +F Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMR-NGKNPVLRIISSIYIEFVRNVPNLLWIFT 74 Query: 77 IFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF +VF S A I + TL SA ++EIIR + ++ KGQ++A + G T Q Sbjct: 75 IF-------LVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSDQ 127 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYC 193 + +IILPQ I + S+F++++K TS+ S I + E+F +Q ++ ++P ++ Sbjct: 128 ILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFEPEQVFS 187 Query: 194 ELAFVYLILTSF 205 + LI SF Sbjct: 188 LYILIALIYFSF 199 >gi|86750027|ref|YP_486523.1| polar amino acid ABC transporter, inner membrane subunit [Rhodopseudomonas palustris HaA2] gi|86573055|gb|ABD07612.1| polar amino acid ABC transporter, inner membrane subunit [Rhodopseudomonas palustris HaA2] Length = 501 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 106/214 (49%), Gaps = 15/214 (7%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQL 74 + ++VTL ++ V S+ IG +A+ R + I LI F ++ +RG PL+ L Sbjct: 289 WGGLLVTLVVSVTGIVASMPIGIALALGR----RSTIPLIRLFSVGFIEFWRGVPLITVL 344 Query: 75 FVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 F Y LP D + ++I + L AY +E++R + +IP+GQ +A+ A+GL+ Sbjct: 345 FFATYMLPLFLPGNFTIDGLMRVLIGVALFAGAYNAEVVRGGLNAIPRGQAEAASALGLS 404 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQRIVSTTYQ-PL 189 +T I+LPQ + L + FI++ K TS+ S + + ++ Q T+ P Sbjct: 405 YAKTTGLIVLPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLGQLRAAFADPTWSTPT 464 Query: 190 IIYCELAFVYLILTSFCYII---QIKIESSVTQH 220 ++ AF LI FC+ + + +E + H Sbjct: 465 TLFTGFAFTGLIYFVFCFGMSRYSLFVEHRLNAH 498 >gi|51598239|ref|YP_072430.1| ABC amino acid transporter, permease subunit [Yersinia pseudotuberculosis IP 32953] gi|170026443|ref|YP_001722948.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186897482|ref|YP_001874594.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|51591521|emb|CAH23193.1| ABC amino acid transporter, permease subunit [Yersinia pseudotuberculosis IP 32953] gi|169752977|gb|ACA70495.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186700508|gb|ACC91137.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis PB1/+] Length = 251 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 105/201 (52%), Gaps = 3/201 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ +FP +T+ I+ ++ V S ++G + V + S + + I+ + Sbjct: 9 NWRYLLWGTFPDGPLGGAALTVVISIMAGVTSAVLGTVLGV-ALAMSRGVWAGILAAVLG 67 Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FR P+++ +F ++ LP + G+ ++ +L L SAY++ +++ I++I GQW Sbjct: 68 FFRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIMAIGAGQW 127 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRI 181 A ++G R QT+ I+LPQ + +++IS++K TS+A + + E+ F Q Sbjct: 128 QAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQVN 187 Query: 182 VSTTYQPLIIYCELAFVYLIL 202 + P+ ++ +A VY +L Sbjct: 188 NRSMVYPMEVFLFVALVYFVL 208 >gi|160899823|ref|YP_001565405.1| polar amino acid ABC transporter inner membrane protein [Delftia acidovorans SPH-1] gi|160365407|gb|ABX37020.1| polar amino acid ABC transporter, inner membrane subunit [Delftia acidovorans SPH-1] Length = 266 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/139 (26%), Positives = 81/139 (58%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 RGTP L+ ++V F LP GI ++ + + + L+ +A ++E+ R+ ++++P+GQ DA Sbjct: 113 LRGTPTLLLIYVCFLVLPAAGIKLGTYWMLTLPIGLSTAAVVAEVYRAGVLAVPRGQTDA 172 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++GLT Q R ++ PQ + L ++ + ++K T+ +T E+ Q A+ +++ Sbjct: 173 ARSLGLTEVQVFRFVVFPQALRYIVPALVAQLVIVVKDTTFGYIVTYGELMQNAKVLIAN 232 Query: 185 TYQPLIIYCELAFVYLILT 203 + + +Y +A +Y ++ Sbjct: 233 YHALVPVYLVVAVLYCLVN 251 >gi|161525299|ref|YP_001580311.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|221214043|ref|ZP_03587016.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|160342728|gb|ABX15814.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|221166220|gb|EED98693.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia multivorans CGD1] Length = 260 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/217 (23%), Positives = 107/217 (49%), Gaps = 16/217 (7%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F +L+A V T+ ++ +S ++ +G AV ++ + ++ I Y + R P L Sbjct: 36 GFGPVLWAGTVQTIELSVLSLATAVALGLIGAVAKLS-HNRVLRAIATGYTTLIRSVPDL 94 Query: 72 VQLFVIFY-------------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 V + ++FY G I I D FVA +++L + AY +E R + +++P Sbjct: 95 VLMLLLFYSIQIWLNQFTDLVGWTQIDI--DPFVAGVLTLGFIYGAYFTETFRGAFLAVP 152 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + A Sbjct: 153 RGQLEAGAAYGMSGARVFVRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAA 212 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q +T+ A +YL +T+ ++ I++E Sbjct: 213 QDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLEK 249 >gi|323351208|ref|ZP_08086864.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] gi|322122432|gb|EFX94143.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] Length = 226 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 75/124 (60%), Gaps = 3/124 (2%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYI 106 ++ + +V ++ TPLLVQ ++FYGLP + I+ + ++ + L AYI Sbjct: 50 KHKVLRGLARIFVEFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYI 109 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +E+IRS I SIP+GQ +A+ + G T +T+R+IILPQ PL ++ ++++K+TS Sbjct: 110 AEVIRSGIQSIPRGQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTV 169 Query: 167 STIT 170 + I+ Sbjct: 170 AIIS 173 >gi|304414485|ref|ZP_07395705.1| putative amino acid transport system permease [Candidatus Regiella insecticola LSR1] gi|304283203|gb|EFL91605.1| putative amino acid transport system permease [Candidatus Regiella insecticola LSR1] Length = 241 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/232 (25%), Positives = 115/232 (49%), Gaps = 17/232 (7%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIF---FSDTIISLIMHF 60 W L+ FP+L +TL I+ ++ + S I+G + V+ F I++ ++ F Sbjct: 9 NWRYLLWGGFPELPLGGAALTLLISLMAGLASAILGTLLGVLLAMTTGFWGQILAAVLGF 68 Query: 61 YVWIFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 FR P+++ +F ++ LP I G+ ++ +L L S+Y++ +++ I+++ Sbjct: 69 ----FRAIPVIMLIFWTYFLLPIIFGVDIPEITTVVCALMLITSSYLAHAVKAGILAVGA 124 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTA 178 GQW A ++G R Q + IILPQ + +++I+++K TS+A + + E+ F Sbjct: 125 GQWQAGLSLGFNRWQVLLFIILPQALRMMVPSFVNQWIALIKDTSLAYIVGVNELTFLAT 184 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ-----IKIESSVTQHTYSVD 225 Q + P+ I+ + +Y +L C ++ I E VT S++ Sbjct: 185 QVNNRSMVYPMEIFLFVGCIYFVL---CLLLDFLVNAITNEFRVTARRQSIE 233 >gi|239982049|ref|ZP_04704573.1| amino acid ABC transporter transmembrane protein [Streptomyces albus J1074] gi|291453901|ref|ZP_06593291.1| amino acid ABC transporter integral membrane protein [Streptomyces albus J1074] gi|291356850|gb|EFE83752.1| amino acid ABC transporter integral membrane protein [Streptomyces albus J1074] Length = 216 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 13/192 (6%) Query: 1 MKYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGF-----FIAVIRIFFSDTIIS 55 M ++W + + D P+ + ++VTL I +IS +G F A R F ++ Sbjct: 1 MNWDW-SAVADFMPRF-WDGVLVTLQATVIGSLISFTLGLVWAIAFRAPTR--FVRWPVT 56 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSII 115 ++ F R TPLLVQLF +F+ LP GI F + II++ L++S Y +++ R+ I Sbjct: 57 IVTEF----IRNTPLLVQLFFLFFVLPEWGIQFSALTTGIIAIGLHYSTYTAQVYRAGID 112 Query: 116 SIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF 175 ++P GQW+A+ A+ L ++T +ILPQ I L + +S+LK T + + I + E+ Sbjct: 113 AVPVGQWEAATALSLPARRTWTAVILPQAIRRVVPALGNYVVSMLKDTPLLAGIGVLEML 172 Query: 176 QTAQRIVSTTYQ 187 Q ++ + T+Q Sbjct: 173 QQSRLEGAATFQ 184 >gi|21224120|ref|NP_629899.1| glutamate permease [Streptomyces coelicolor A3(2)] gi|2687339|emb|CAA15880.1| glutamate permease [Streptomyces coelicolor A3(2)] Length = 299 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 91/165 (55%), Gaps = 15/165 (9%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTI-----ISLIMHFYVWIFRGTPLLVQL---F 75 TL A +S VI+L +G + + R+ SD +++++ F FR P+LV + Sbjct: 71 TLKAAALSMVIALPLGAVLGIARL--SDHAWVRIPVAIVVEF----FRSIPVLVLMIFGL 124 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +F + A++ L L ++ ++EI+R+ I+++PKGQ + + AIGL + Q+ Sbjct: 125 ALFAEYTDVSSDDRPLYAVVTGLVLYNASVLAEIVRAGILALPKGQAEGAMAIGLRKGQS 184 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTI-TIPEIFQTAQ 179 +R I+LPQ +TT + S+ + ILK T++ + T PE+ +A Sbjct: 185 MRLILLPQAVTTMLPAIVSQLVVILKDTALGGAVLTFPELLASAN 229 >gi|125718375|ref|YP_001035508.1| arginine/histidine ABC transporter permease [Streptococcus sanguinis SK36] gi|125498292|gb|ABN44958.1| ABC transporter membrane-spanning permease, arginine/histidine transport, putative [Streptococcus sanguinis SK36] gi|325690799|gb|EGD32800.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK115] gi|325694843|gb|EGD36748.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK150] gi|325696132|gb|EGD38023.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK160] gi|332358686|gb|EGJ36509.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK355] gi|332362444|gb|EGJ40244.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1056] gi|332367138|gb|EGJ44874.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1059] Length = 226 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 75/124 (60%), Gaps = 3/124 (2%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYI 106 ++ + +V ++ TPLLVQ ++FYGLP + I+ + ++ + L AYI Sbjct: 50 KHKVLRGLARVFVEFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYI 109 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +E+IRS I SIP+GQ +A+ + G T +T+R+IILPQ PL ++ ++++K+TS Sbjct: 110 AEVIRSGIQSIPRGQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTV 169 Query: 167 STIT 170 + I+ Sbjct: 170 AIIS 173 >gi|153948328|ref|YP_001403105.1| polar amino acid ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|152959823|gb|ABS47284.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pseudotuberculosis IP 31758] Length = 251 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 105/201 (52%), Gaps = 3/201 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ +FP +T+ I+ ++ V S ++G + V + S + + I+ + Sbjct: 9 NWRYLLWGTFPDGPLGGAALTVVISIMAGVASAVLGTVLGV-ALAMSRGVWAGILAAVLG 67 Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FR P+++ +F ++ LP + G+ ++ +L L SAY++ +++ I++I GQW Sbjct: 68 FFRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIMAIGAGQW 127 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRI 181 A ++G R QT+ I+LPQ + +++IS++K TS+A + + E+ F Q Sbjct: 128 QAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQVN 187 Query: 182 VSTTYQPLIIYCELAFVYLIL 202 + P+ ++ +A VY +L Sbjct: 188 NRSMVYPMEVFLFVALVYFVL 208 >gi|189349963|ref|YP_001945591.1| polar amino acid transporter permease [Burkholderia multivorans ATCC 17616] gi|189333985|dbj|BAG43055.1| polar amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 229 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/217 (23%), Positives = 107/217 (49%), Gaps = 16/217 (7%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F +L+A V T+ ++ +S ++ +G AV ++ + ++ I Y + R P L Sbjct: 5 GFGPVLWAGTVQTIELSVLSLATAVALGLIGAVAKLS-HNRVLRAIATGYTTLIRSVPDL 63 Query: 72 VQLFVIFY-------------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 V + ++FY G I I D FVA +++L + AY +E R + +++P Sbjct: 64 VLMLLLFYSIQIWLNQFTDLVGWTQIDI--DPFVAGVLTLGFIYGAYFTETFRGAFLAVP 121 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + A Sbjct: 122 RGQLEAGAAYGMSGARVFVRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAA 181 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q +T+ A +YL +T+ ++ I++E Sbjct: 182 QDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLEK 218 >gi|116049209|ref|YP_791988.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|254234384|ref|ZP_04927707.1| hypothetical protein PACG_00227 [Pseudomonas aeruginosa C3719] gi|254239633|ref|ZP_04932955.1| hypothetical protein PA2G_00250 [Pseudomonas aeruginosa 2192] gi|296390364|ref|ZP_06879839.1| ABC transporter permease [Pseudomonas aeruginosa PAb1] gi|115584430|gb|ABJ10445.1| putative amino acid ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|126166315|gb|EAZ51826.1| hypothetical protein PACG_00227 [Pseudomonas aeruginosa C3719] gi|126193011|gb|EAZ57074.1| hypothetical protein PA2G_00250 [Pseudomonas aeruginosa 2192] Length = 214 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 100/197 (50%), Gaps = 4/197 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I ++ +I ++G ++R SL + + +FR PLL+Q FV+ Sbjct: 21 TLAITAMAMLIGTLLGVVFGLLRALLPRA--SLPLAALLDVFRSVPLLIQ-FVLLNSFKS 77 Query: 84 I-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 I G+ + +F + L + +AY +E++R ++S+P A+ ++GL+ +Q + HI+LP Sbjct: 78 ILGLDWSAFAVACLVLGVYAAAYCTEVVRGGVLSVPPSVRRAARSLGLSYRQDLFHIVLP 137 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + + +S++K TS+ I I E+ + +Q IV+ +PL + C VY ++ Sbjct: 138 MAARVAFPGWVNLTLSVMKDTSLVLWIGIVELLRASQTIVTRIQEPLFVLCIAGLVYYLM 197 Query: 203 TSFCYIIQIKIESSVTQ 219 + + ++E Q Sbjct: 198 SWVVARLGARLERRWQQ 214 >gi|108810144|ref|YP_654060.1| putative amino acid transport system permease [Yersinia pestis Antiqua] gi|108814126|ref|YP_649893.1| amino acid transport system permease [Yersinia pestis Nepal516] gi|145601164|ref|YP_001165240.1| amino acid transport system permease [Yersinia pestis Pestoides F] gi|150260957|ref|ZP_01917685.1| putative amino acid transport system permease [Yersinia pestis CA88-4125] gi|162421147|ref|YP_001608459.1| polar amino acid ABC transporter permease [Yersinia pestis Angola] gi|165926123|ref|ZP_02221955.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939983|ref|ZP_02228520.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|166009454|ref|ZP_02230352.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166213182|ref|ZP_02239217.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167401543|ref|ZP_02307037.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422872|ref|ZP_02314625.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425488|ref|ZP_02317241.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468128|ref|ZP_02332832.1| putative amino acid transport system permease [Yersinia pestis FV-1] gi|218931085|ref|YP_002348960.1| putative amino acid transport system permease [Yersinia pestis CO92] gi|229839817|ref|ZP_04459976.1| putative amino acid transport system permease [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841902|ref|ZP_04462058.1| putative amino acid transport system permease [Yersinia pestis biovar Orientalis str. India 195] gi|229896779|ref|ZP_04511942.1| putative amino acid transport system permease [Yersinia pestis Pestoides A] gi|229904667|ref|ZP_04519778.1| putative amino acid transport system permease [Yersinia pestis Nepal516] gi|294505632|ref|YP_003569694.1| putative amino acid transport system permease [Yersinia pestis Z176003] gi|108777774|gb|ABG20293.1| amino acid transport system permease [Yersinia pestis Nepal516] gi|108782057|gb|ABG16115.1| putative amino acid transport system permease [Yersinia pestis Antiqua] gi|115349696|emb|CAL22677.1| putative amino acid transport system permease [Yersinia pestis CO92] gi|145212860|gb|ABP42267.1| amino acid transport system permease [Yersinia pestis Pestoides F] gi|149290365|gb|EDM40442.1| putative amino acid transport system permease [Yersinia pestis CA88-4125] gi|162353962|gb|ABX87910.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis Angola] gi|165912109|gb|EDR30749.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|165921983|gb|EDR39160.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165991376|gb|EDR43677.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205480|gb|EDR49960.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166958264|gb|EDR55285.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048925|gb|EDR60333.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055502|gb|EDR65295.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229678785|gb|EEO74890.1| putative amino acid transport system permease [Yersinia pestis Nepal516] gi|229691241|gb|EEO83294.1| putative amino acid transport system permease [Yersinia pestis biovar Orientalis str. India 195] gi|229696183|gb|EEO86230.1| putative amino acid transport system permease [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700217|gb|EEO88253.1| putative amino acid transport system permease [Yersinia pestis Pestoides A] gi|262363797|gb|ACY60518.1| putative amino acid transport system permease [Yersinia pestis D106004] gi|262367733|gb|ACY64290.1| putative amino acid transport system permease [Yersinia pestis D182038] gi|294356091|gb|ADE66432.1| putative amino acid transport system permease [Yersinia pestis Z176003] gi|320017441|gb|ADW01013.1| putative amino acid transport system permease [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 251 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 105/201 (52%), Gaps = 3/201 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ +FP +T+ I+ ++ V S ++G + V + S + + I+ + Sbjct: 9 NWRYLLWGTFPDGPLGGAALTVVISIMAGVASAVLGTVLGV-ALAMSRGVWAGILAAVLG 67 Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FR P+++ +F ++ LP + G+ ++ +L L SAY++ +++ I++I GQW Sbjct: 68 FFRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIMAIGAGQW 127 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRI 181 A ++G R QT+ I+LPQ + +++IS++K TS+A + + E+ F Q Sbjct: 128 QAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQVN 187 Query: 182 VSTTYQPLIIYCELAFVYLIL 202 + P+ ++ +A VY +L Sbjct: 188 NRSMVYPMEVFLFVALVYFVL 208 >gi|330719151|ref|ZP_08313751.1| L-cystine permease [Leuconostoc fallax KCTC 3537] Length = 234 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 105/195 (53%), Gaps = 16/195 (8%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY--- 79 VT+ +A +S +I +G +A++R ++ I+S + + + +G PL++ V+F Sbjct: 21 VTIYMAFVSLIIGGALGLAVALVR-YYKVPILSQLFSTLITMLKGVPLILVFLVVFLIAS 79 Query: 80 -GLPHIGIVFD----------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 H+ S +AII L+L +SE R + S+ + Q+DA+ ++ Sbjct: 80 QNFNHLAKAMGWQIRYGDLPMSALAII-GLSLMAMVGLSEAFRGAFESVKQVQFDAARSL 138 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 G+T+ QTIR +++PQT+ + + + I+++K T++AS +++ EIF A + S+ Y+ Sbjct: 139 GMTKMQTIRRVLIPQTLPVALPMIINMLINLIKGTAIASLVSVVEIFSAATQAASSNYKY 198 Query: 189 LIIYCELAFVYLILT 203 Y A +Y ++T Sbjct: 199 FEAYIAAAMIYWLMT 213 >gi|330816077|ref|YP_004359782.1| histidine ABC transporter, permease protein HisQ [Burkholderia gladioli BSR3] gi|327368470|gb|AEA59826.1| histidine ABC transporter, permease protein HisQ [Burkholderia gladioli BSR3] Length = 229 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/216 (23%), Positives = 108/216 (50%), Gaps = 16/216 (7%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F +++A V T+ ++ +S ++I+G AV ++ ++ ++ I Y + R P L Sbjct: 5 GFGPVIWAGTVQTIELSVLSLAAAVILGLLGAVAKLS-ANRVMRGIGTAYTTLIRSVPDL 63 Query: 72 VQLFVIFY-------------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 V + ++FY G I I D FVA +++L + AY +E R + +S+P Sbjct: 64 VLMLLLFYSIQIWLNDLTDLLGWDQIDI--DPFVAGVLTLGFIYGAYFTETFRGAFLSVP 121 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + A Sbjct: 122 RGQLEAGAAYGMSGLRVFTRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAA 181 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 Q +T+ A +YL +T+ ++ ++E Sbjct: 182 QDAGKSTFNMFFFILVAALIYLAITTVSNLVLRQLE 217 >gi|260575386|ref|ZP_05843385.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sp. SW2] gi|259022306|gb|EEW25603.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sp. SW2] Length = 256 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/158 (32%), Positives = 90/158 (56%), Gaps = 19/158 (12%) Query: 64 IFRGTPLLVQLFVIFYGL----PHIGIVFDS---------FVAIIISLTLNFSAYISEII 110 + RGTPLL+QL+++++GL P + DS + +++LTL+F+ Y E++ Sbjct: 85 VIRGTPLLLQLWLLYFGLGSLFPQFPWIKDSSLWPYLRQAWPYAVLALTLSFAGYEGEVM 144 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R + + +GQ +A+ A+G+ R +R I LPQ + + L E + LK+T + +TIT Sbjct: 145 RGAFKGVQRGQLEAARAMGMPRLTILRRIWLPQALHRALPTLGGEVVLQLKATPLVATIT 204 Query: 171 IPEIFQTAQRIVSTT---YQPLIIYCELAFVYLILTSF 205 + +I+ A R+ T Y+PL++ LA VY+ +T Sbjct: 205 VVDIYSVASRVRQDTFIVYEPLLL---LAVVYMAITGL 239 >gi|222080874|ref|YP_002540237.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725553|gb|ACM28642.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 214 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 76/140 (54%) Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 I R P ++ LF+IF+GL FVA + L L +A ++EI R ++ SI GQW+ Sbjct: 55 IVRAIPPILWLFIIFFGLGISLFPISPFVAALAGLGLIAAANMAEIYRGALSSIHHGQWE 114 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A A+ L R T+R ++ PQ + +S I ++K T+VASTI + E+ ++ Sbjct: 115 ACAALDLGRWSTMRDVVAPQAFRVALPSGASYLIGLMKETAVASTIGVTELAYQGNQLSQ 174 Query: 184 TTYQPLIIYCELAFVYLILT 203 T++ L I+ + Y+ L+ Sbjct: 175 LTFRGLEIFAFVGLFYIFLS 194 >gi|324991489|gb|EGC23422.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK353] gi|324993849|gb|EGC25768.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK405] gi|324994830|gb|EGC26743.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK678] gi|325687271|gb|EGD29293.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK72] Length = 226 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 75/124 (60%), Gaps = 3/124 (2%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYI 106 ++ + +V ++ TPLLVQ ++FYGLP + I+ + ++ + L AYI Sbjct: 50 KHKVLRGLARVFVEFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYI 109 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +E+IRS I SIP+GQ +A+ + G T +T+R+IILPQ PL ++ ++++K+TS Sbjct: 110 AEVIRSGIQSIPRGQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTV 169 Query: 167 STIT 170 + I+ Sbjct: 170 AIIS 173 >gi|326204746|ref|ZP_08194601.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium papyrosolvens DSM 2782] gi|325985117|gb|EGD45958.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium papyrosolvens DSM 2782] Length = 387 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 95/174 (54%), Gaps = 10/174 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQ 73 L+ ++T+ IA + V+S IG +A+ R + + +I F Y+ + RG PL+ Sbjct: 177 LWGGFLLTVLIAVVDIVLSFPIGVLLALGR----RSKLVVIRWFCIIYIEVIRGVPLITV 232 Query: 74 LFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LF LP G+ ++ + ++I TL +AY++E +R + IP+GQ++A+ A+GL Sbjct: 233 LFGAQLLLPLFLGNGLELNNVLRVMIGFTLFNAAYVAETVRGGMQIIPQGQYEAAQALGL 292 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 Q I +I+PQ + + L I + K TS+ + +++ ++ A+R+V+ Sbjct: 293 NYVQRITFVIMPQALRSVVPALVGSVIEVFKDTSLVAIVSLMDLLGIAKRVVAN 346 >gi|238026230|ref|YP_002910461.1| glutamate/aspartate transport system permease [Burkholderia glumae BGR1] gi|237875424|gb|ACR27757.1| Glutamate/aspartate transport system permease protein [Burkholderia glumae BGR1] Length = 225 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 101/188 (53%), Gaps = 11/188 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++W I + P L AIV TL I ++ V+ ++ G +A++R+ + Y Sbjct: 3 DFDWSG-IPGALPALWTGAIV-TLEITALAIVVGIVWGTLLALMRLS-GVAALQWFARLY 59 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI--GIVFDS------FVAIIISLTLNFSAYISEIIRSS 113 V +FR PL++ L F +P + G++ S + +I+ +L +AY SEIIR+ Sbjct: 60 VTVFRSIPLVMVLLWFFLIVPQLLQGVLGLSPTIDIRLASAMIAFSLFEAAYYSEIIRAG 119 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++P+GQ +A++A+G+ Q +R +ILPQ L ++ I + + TS+ I++ + Sbjct: 120 IQAVPRGQVNAAFALGMGYGQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYVISLAD 179 Query: 174 IFQTAQRI 181 F+TA I Sbjct: 180 FFRTATNI 187 >gi|71734098|ref|YP_274659.1| glutamine ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|298486963|ref|ZP_07005016.1| glutamate/aspartate transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71554651|gb|AAZ33862.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298158525|gb|EFH99592.1| glutamate/aspartate transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 233 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 107/211 (50%), Gaps = 10/211 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K++ ++ + +L+ I TL +A +++ +++ + + IR+ + L+ Y Sbjct: 4 KFDLSAILQGEYAELIVKGIETTLQLAFVAWCMAMAVALLLVSIRLTGNKYAERLVAG-Y 62 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 V R P LVQL + ++G+P + ++ +I+L L +AY SE IRS Sbjct: 63 VSYHRNVPTLVQLMLWYFGIPTLLTESTQLWLANYSTEYLFSVIALGLCQAAYFSEDIRS 122 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +IP GQ +AS A+GL +++R++ILPQ + L + + + K+TS+ I + Sbjct: 123 GLRAIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVV 182 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+ + + + T++ Y VYL ++ Sbjct: 183 ELTYATREVENYTFRTFEAYLVATVVYLAIS 213 >gi|260904716|ref|ZP_05913038.1| amino acid ABC transporter membrane protein [Brevibacterium linens BL2] Length = 280 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 93/167 (55%), Gaps = 4/167 (2%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W+ +L + TL +A ++ +++L++G A++R+ S +IS+ + Sbjct: 52 KWYPFTFSQIQLVLLQGMAATLKVAVVASLLALVVGVVFALLRLS-SKKVISVPGTIVLE 110 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 FRG P+L+ +F +F G +F +++I LTL ++EIIR+ I+++PKGQ + Sbjct: 111 FFRGVPVLLLIFAMFL---IFGNTIGAFWSVVIGLTLYNGMVLAEIIRAGILAVPKGQRE 167 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 A+ AIGL Q + +++PQ + + ++ + +LK +++ +T Sbjct: 168 AAMAIGLRPGQVMSLVLMPQALRAMMPTIIAQIVVLLKDSALGFIVT 214 >gi|154244133|ref|YP_001415091.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] gi|154158218|gb|ABS65434.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] Length = 217 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 113/196 (57%), Gaps = 9/196 (4%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L A + T+ ++ I+FV ++GF +A+ RI S + ++ Y+ + +GTPLL+ L Sbjct: 10 QFLCWAALWTVGLSAIAFVGGGLVGFGVALARIS-STRWVRILATAYIQVVQGTPLLILL 68 Query: 75 FVIFYGLPHIGIVFDSFVAII---ISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 F+ ++G+ G F AI+ + LT+ S +++EI R I S+PK QW+A+ + L+ Sbjct: 69 FLFYFGIAIAG--FKEVPAILAAGLGLTIYSSGFLAEIWRGCIESVPKTQWEAAECLSLS 126 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLII 191 R Q + +ILPQ + + P + I+K+TS+AS + E+ Q + + ++ ++P I Sbjct: 127 RWQRLTRVILPQAMRIATAPTVGFLVQIVKNTSLASVVGFVELSQAGKLVNNSIFEPFTI 186 Query: 192 YCELAFVYLILTSFCY 207 + +A +Y +L CY Sbjct: 187 FMVVAAIYFVL---CY 199 >gi|261210915|ref|ZP_05925205.1| amino acid ABC transporter permease protein [Vibrio sp. RC341] gi|260839890|gb|EEX66490.1| amino acid ABC transporter permease protein [Vibrio sp. RC341] Length = 365 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 8/195 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFV 76 + ++VTL IA + + SL IG +A+ R SD II + Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIIASLPIGVALALGRR--SDMPIIRSLCTVYIEVWRGVPLITVLFM 212 Query: 77 IFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G D + +I + + +AY++E+IR + +IPKGQ++A+ A+GL+ Sbjct: 213 ASVMLPLFLSQGSEIDKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYW 272 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + + IILPQ + + + + FI + K TS+ I + ++ Q +T L Sbjct: 273 KKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQS-ANTDPNWLGFAT 331 Query: 194 E-LAFVYLILTSFCY 207 E FV L+ FC+ Sbjct: 332 ESYVFVALVFWVFCF 346 >gi|104781004|ref|YP_607502.1| amino acid ABC transporter permease [Pseudomonas entomophila L48] gi|95109991|emb|CAK14696.1| putative amino acid ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 235 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 11/165 (6%) Query: 53 IISLIMHFYVWIFRGTPLLVQLFVIFYGL--------PHIG---IVFDSFVAIIISLTLN 101 ++ L Y + R P LV + +IFY + +G + D F A +I+L Sbjct: 51 LLRLPATLYTTLIRSVPDLVLILLIFYSMQIWLNDLTEALGWDYVEIDPFGAGVITLGFI 110 Query: 102 FSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILK 161 + AY +E R +I+S+P GQ +A+ A GL+R Q R ++ PQ + + L + ++ +LK Sbjct: 111 YGAYFTENFRGAILSVPAGQLEAATAYGLSRAQRFRLVLFPQLMRFALPGLGNNWLVLLK 170 Query: 162 STSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFC 206 ST++ S I + ++ + AQ TT L VYL++T+ Sbjct: 171 STALVSIIGLADLVKAAQNAGKTTNDVLFFLSLAGLVYLLITTLS 215 >gi|89056449|ref|YP_511900.1| amino acid ABC transporter permease [Jannaschia sp. CCS1] gi|88865998|gb|ABD56875.1| amino acid ABC transporter membrane protein 2, PAAT family [Jannaschia sp. CCS1] Length = 293 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 70/98 (71%), Gaps = 1/98 (1%) Query: 88 FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITT 147 F S ++ ++ L L SA++ EI+R+ I S+PKGQ +A+ +IG++R Q +R+I+LPQ + Sbjct: 161 FPSLISGVVVLALFESAFVGEIVRAGIQSVPKGQREAARSIGMSRWQELRYIVLPQAMKK 220 Query: 148 SAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVST 184 P++++FI+++K +S+ S I++ E+ ++T + + S+ Sbjct: 221 VVPPMANQFITLIKDSSIISLISVQELTYKTVELVASS 258 >gi|91780136|ref|YP_555343.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91692796|gb|ABE35993.1| hydroxyectoine ABC transporter membrane protein / ectoine ABC transporter membrane protein [Burkholderia xenovorans LB400] Length = 219 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 107/203 (52%), Gaps = 4/203 (1%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 T+ + + ++L++ F + R+ T + + Y+ FRGT + VQLF ++ LP Sbjct: 18 TVELTVMGAALALVMAFVAGLGRLS-RFTAVRALATSYIEFFRGTSVFVQLFWAYFVLPM 76 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 +G+ A +++L LN AY +E++R +++++ + Q A A+ L+ Q +RH+ILPQ Sbjct: 77 VGLTLTPLQAGVLALGLNVGAYGAEVVRGAVVAVGQEQRSACVALNLSSYQRMRHVILPQ 136 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + + I +LK T+V S I++ ++ AQ + S T LI + + +Y + Sbjct: 137 ALPLMLPTFGNNAIELLKGTAVVSLISLGDMTFQAQVVRSQTGNTLIPFATILALYFAMA 196 Query: 204 SFCYIIQIKIESSVTQHTYSVDK 226 C +I + + + ++ +D+ Sbjct: 197 --C-LIALGVRKLERRMSFGLDR 216 >gi|50914755|ref|YP_060727.1| amino acid ABC transporter permease [Streptococcus pyogenes MGAS10394] gi|94994868|ref|YP_602966.1| amino acid ABC transporter permease [Streptococcus pyogenes MGAS10750] gi|50903829|gb|AAT87544.1| Amino acid ABC transporter permease protein [Streptococcus pyogenes MGAS10394] gi|94548376|gb|ABF38422.1| Amino acid ABC transporter permease protein [Streptococcus pyogenes MGAS10750] Length = 297 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 107/212 (50%), Gaps = 20/212 (9%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W + + D+ P ++ + +TL + L++ A+++I ++ I +V Sbjct: 56 FSW-HAVFDAIPNII-QRLPITLGLTLSGATFGLVLALIFALVKIN-KVKLLYPIQAIFV 112 Query: 63 WIFRGTPLLVQLFVIFYGLP--------------HIGIVFDSFVAIIISLTLNFSAYISE 108 RGTP+LVQL + +YG+P ++ + S AI + N +AY SE Sbjct: 113 SFLRGTPILVQLMLTYYGIPLFLKFLNQKYGFDWNVNAIPASIFAIT-AFAFNEAAYASE 171 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP-LSSEFISILKSTSVAS 167 IR++I+S+ G+ +A+ ++G+T Q R +I+P T A+P L + I + K TS+A Sbjct: 172 TIRAAILSVDTGEIEAAKSLGMTSVQVYRRVIIPNA-TVVAIPTLINGLIGLTKGTSLAF 230 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I E+F AQ + + Y+ Y +A VY Sbjct: 231 NAGIVEMFAQAQILGGSDYRYFERYISVALVY 262 >gi|330980534|gb|EGH78637.1| glutamine ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 233 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 107/211 (50%), Gaps = 10/211 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K++ ++ + +L+ I TL +A +++ +++ I + IR+ + L+ Y Sbjct: 4 KFDLSAILQGEYAELIVKGIETTLQLALVAWCLAMAIALLLVSIRLTGNKYAERLVAG-Y 62 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 V R P LVQL + ++G+P + ++ +I+L L +AY SE IRS Sbjct: 63 VSYQRNVPTLVQLMLWYFGIPTLLSESTQIWLANYSTEYLFSVIALGLCQAAYFSEDIRS 122 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +IP GQ +AS A+GL +++R++ILPQ + L + + + K+TS+ I + Sbjct: 123 GLRAIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVV 182 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+ + + + T++ Y VYL ++ Sbjct: 183 ELTYATREVENYTFRTFEAYLVATVVYLAIS 213 >gi|317047528|ref|YP_004115176.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316949145|gb|ADU68620.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 237 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 75/129 (58%) Query: 91 FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 F+ +I+L + +SAY S+ +R ++ ++P GQW++ A+G+ + +I+PQ + Sbjct: 104 FLCGVIALAMLYSAYASQTLRGALKAVPVGQWESGQALGMKKSAIFFRLIMPQMWRHALP 163 Query: 151 PLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQ 210 L ++++ +LK T++ S I++ ++ + I + T +P Y A +YLI+T F + Sbjct: 164 GLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYLVAAAIYLIITLFSQAVL 223 Query: 211 IKIESSVTQ 219 +IES T+ Sbjct: 224 RRIESRTTR 232 >gi|91782895|ref|YP_558101.1| ABC lysine/arginine/ornithine transporter, innermembrane subunit [Burkholderia xenovorans LB400] gi|91686849|gb|ABE30049.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia xenovorans LB400] Length = 233 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 107/217 (49%), Gaps = 16/217 (7%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F +L A + T+ ++ +S V ++++G A ++ FS + + I Y + R P L Sbjct: 9 GFGPVLLAGTIQTIELSVLSLVAAVLLGLAGAAAKLSFSRPLRA-IATGYTTLIRSVPDL 67 Query: 72 VQLFVIFY-------------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 V + ++FY LP I D FVA +++L + AY +E R + +++P Sbjct: 68 VLMLLLFYSIQIAVNDLTDALNLPQFDI--DPFVAGVLTLGFIYGAYFTETFRGAFLAVP 125 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 +GQ +A A G++ + I+ PQ + + + + + ++K+T++ S I + ++ + A Sbjct: 126 RGQLEAGSAYGMSGARVFTRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAA 185 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 Q +T+ A +YL +T+ ++ I +E Sbjct: 186 QDAGKSTFNMFFFILIAALIYLAITTVSNLVLIWLEK 222 >gi|45443739|ref|NP_995278.1| putative amino acid transport system permease [Yersinia pestis biovar Microtus str. 91001] gi|45438609|gb|AAS64155.1| putative amino acid transport system permease [Yersinia pestis biovar Microtus str. 91001] Length = 269 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 105/201 (52%), Gaps = 3/201 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ +FP +T+ I+ ++ V S ++G + V + S + + I+ + Sbjct: 27 NWRYLLWGTFPDGPLGGAALTVVISIMAGVASAVLGTVLGV-ALAMSRGVWAGILAAVLG 85 Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FR P+++ +F ++ LP + G+ ++ +L L SAY++ +++ I++I GQW Sbjct: 86 FFRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIMAIGAGQW 145 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRI 181 A ++G R QT+ I+LPQ + +++IS++K TS+A + + E+ F Q Sbjct: 146 QAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQVN 205 Query: 182 VSTTYQPLIIYCELAFVYLIL 202 + P+ ++ +A VY +L Sbjct: 206 NRSMVYPMEVFLFVALVYFVL 226 >gi|256784801|ref|ZP_05523232.1| glutamate permease [Streptomyces lividans TK24] Length = 295 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 91/165 (55%), Gaps = 15/165 (9%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTI-----ISLIMHFYVWIFRGTPLLVQL---F 75 TL A +S VI+L +G + + R+ SD +++++ F FR P+LV + Sbjct: 71 TLKAAALSMVIALPLGAVLGIARL--SDHAWVRIPVAIVVEF----FRSIPVLVLMIFGL 124 Query: 76 VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +F + A++ L L ++ ++EI+R+ I+++PKGQ + + AIGL + Q+ Sbjct: 125 ALFAEYTDVSSDDRPLYAVVTGLVLYNASVLAEIVRAGILALPKGQAEGAMAIGLRKGQS 184 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTI-TIPEIFQTAQ 179 +R I+LPQ +TT + S+ + ILK T++ + T PE+ +A Sbjct: 185 MRLILLPQAVTTMLPAIVSQLVVILKDTALGGAVLTFPELLASAN 229 >gi|291004254|ref|ZP_06562227.1| amino acid ABC transporter, permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 216 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 97/167 (58%), Gaps = 2/167 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I+ + +L + T+ + ++ V SL++G +A +R+ + + + YV + R T Sbjct: 4 ILVEYGDVLARGFLRTIELFLLAGVGSLVLGTLLATLRVSPVPALRA-VGTGYVTLLRNT 62 Query: 69 PLLVQLFVIFYGLPHIGIV-FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYA 127 PL + F + P + ++ F F A +I+LT+ SA++ E++RS I ++P GQ +A+ + Sbjct: 63 PLTLVFFFFVFAYPKLELLQFPFFTAAVIALTVYTSAFVCEVLRSGINTVPVGQAEAARS 122 Query: 128 IGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 IGL Q++ ++ILPQ P+ S I++LK+T+VA+ ++ E+ Sbjct: 123 IGLGFAQSLTNVILPQAFRAVVPPMVSVLIALLKNTTVAAGFSVNEV 169 >gi|111225074|ref|YP_715868.1| glutamate ABC transporter membrane protein [Frankia alni ACN14a] gi|111152606|emb|CAJ64347.1| putative glutamate transport protein (ABC superfamily, membrane) [Frankia alni ACN14a] Length = 197 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 73/128 (57%), Gaps = 2/128 (1%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV I R TPL V F + + LP + IVF F +++L++ A + E +RS I + G Sbjct: 36 YVEIVRNTPLTVVFFFVVFVLPQVDIVFSYFTFAVVALSIYHGALVCEAVRSGINGVDLG 95 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+GLT Q++R I+LPQ PL S +++++TS+A+ + E+ QR Sbjct: 96 QAEAARALGLTFTQSLRMIVLPQAFRNVLQPLGSVISALIRNTSIAAAFGVQELTGVVQR 155 Query: 181 IVSTTYQP 188 + TT P Sbjct: 156 L--TTANP 161 >gi|307705181|ref|ZP_07642053.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK597] gi|307621266|gb|EFO00331.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK597] Length = 202 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 20/172 (11%) Query: 57 IMHFYVWIFRGTPLLVQLFVIFYGLP--------HIGIVFDSFVAIIISLTL-----NFS 103 + F+V +GTP+LVQL + +YG+P G + + + N + Sbjct: 12 LQAFFVSFLKGTPILVQLMLTYYGIPLALKALNQQWGTGLNINAIPAAAFAIVAFAFNEA 71 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 AY SE IR++I+S+ G+ +A+ ++G+TR Q R +I+P + L + I + K T Sbjct: 72 AYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKGT 131 Query: 164 SVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 S+A + + E+F AQ + Y+ + +A VY +++ I IES Sbjct: 132 SLAFSAGVVEVFAQAQILGGADYRYFERFISVALVY-------WVVNIGIES 176 >gi|320095185|ref|ZP_08026891.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Actinomyces sp. oral taxon 178 str. F0338] gi|319977890|gb|EFW09527.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Actinomyces sp. oral taxon 178 str. F0338] Length = 292 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/150 (34%), Positives = 86/150 (57%), Gaps = 4/150 (2%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII--ISLTLNFSAYISEIIRSSIISIP 118 Y IFRG P LV L+++ +G+P + A++ I+L L +S+Y++E++R+ + SI Sbjct: 125 YTDIFRGIPFLVVLYLVGFGIPALNPNDRIPTAVLGTIALVLTYSSYVAEVLRAGLESIH 184 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 Q A+ ++GLT QT+R II+PQ I L ++FIS+ K + S + + + A Sbjct: 185 PSQRYAARSLGLTHGQTLRMIIVPQAIRKVTPALMNDFISMQKDVGLISVLGAVDAIRAA 244 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYI 208 Q+ + TY + Y +A V IL SF +I Sbjct: 245 QQYQAKTYN-MTSYV-VAGVLFILMSFPFI 272 >gi|260221678|emb|CBA30483.1| hypothetical protein Csp_C23770 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 271 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 106/211 (50%), Gaps = 23/211 (10%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV-Q 73 Q L + T+ +A ISF ++ IG +A+ + FY+ + RG P LV Sbjct: 41 QTLAEGLWTTVYVAVISFTLAASIGLLLALAS-RSKHVWLRQGARFYIEVIRGLPALVIL 99 Query: 74 LFVIFYGLPHI---------GIVFDSF------------VAIIISLTLNFSAYISEIIRS 112 L+V F G P + G + + V I++L L +SA+++E+ R+ Sbjct: 100 LYVTFVGAPALVNLYQWACEGWIAKEWLPDVQVRDVSNTVRGIVALALAYSAFLAEVFRA 159 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + S+ + Q +A+ AIGL R T R ++ PQ + L ++FI+++K +S+ S + + Sbjct: 160 GLQSVERAQIEAAQAIGLNRWLTFRLVVWPQAVRRVLPVLGNDFIAMVKDSSLVSVLGVN 219 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 +I Q + S+++ + Y +A +YL+LT Sbjct: 220 DITQLGKLYASSSFLTVETYNVVAVLYLMLT 250 >gi|162148489|ref|YP_001602950.1| inner membrane amino-acid ABC transporter permease [Gluconacetobacter diazotrophicus PAl 5] gi|161787066|emb|CAP56653.1| putative inner membrane amino-acid ABC transporter permease [Gluconacetobacter diazotrophicus PAl 5] Length = 219 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 79/143 (55%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 Y I TP L Q+F IFY L +G++ F ++ I + LN + Y+++I+ + + +P Sbjct: 59 YSTIMTNTPQLSQIFAIFYCLALLGVMVSPFASVFIGMALNAAGYLADIVTTGLGRVPPL 118 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 DA+ ++GLTR+Q +I P + T A L++ F ++ +S+AS + ++ A Sbjct: 119 YHDAAASLGLTRRQAYMRVIFPHALQTMAPALANHFQIMILGSSMASIFGVEDLTGRAYD 178 Query: 181 IVSTTYQPLIIYCELAFVYLILT 203 + STT++ L + +Y +L+ Sbjct: 179 VGSTTFRILEVMLVAGVLYALLS 201 >gi|149003318|ref|ZP_01828207.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS69] gi|147758501|gb|EDK65499.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS69] Length = 147 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 81/143 (56%), Gaps = 2/143 (1%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 I++ + L A +TL IA + S ++G +++IR + +++ + Y+ + R T Sbjct: 5 IVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIR-HYRIPVLAQVATAYIELSRNT 63 Query: 69 PLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 PLL+QLF +++GLP IGIV S V + L +Y++E RS + +I + Q + AI Sbjct: 64 PLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAI 123 Query: 129 GLTRKQTIRHIILPQTITTSAVP 151 GLT Q +++LPQ T A+P Sbjct: 124 GLTPLQVFYYVVLPQA-TAVALP 145 >gi|218459733|ref|ZP_03499824.1| amino acid ABC transporter ATP-binding protein [Rhizobium etli Kim 5] Length = 272 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 26/200 (13%) Query: 37 IIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF----------VIFYGLPHIG- 85 I+G +A+ R+ S ++S + Y+W+ R P++V L I G+P Sbjct: 6 ILGTALALARVSRS-PLLSGLSWGYIWLLRSIPMIVLLLILNNLGYLYETIRIGIPFTDT 64 Query: 86 IVFD--------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 ++FD F A + LTLN SA+ +EI+R I+S+ GQ +A+ A+GL R++ Sbjct: 65 VLFDYPTVQLLTPFAAAYLGLTLNQSAFFAEIVRGGILSVDHGQLEAAAALGLPRRRQAF 124 Query: 138 HIILPQTITTSAVPLS-SEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCE 194 I+LPQ + S +P +E I + KSTSV + +PE+F T Q I + PL++ Sbjct: 125 RIVLPQAM-RSILPTGFNELIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVIPLLMVAT 183 Query: 195 LAFVYLILTSFCYIIQIKIE 214 + YLI+ + + Q IE Sbjct: 184 V--WYLIIMTVLSVAQHYIE 201 >gi|71904066|ref|YP_280869.1| amino acid ABC transporter permease protein [Streptococcus pyogenes MGAS6180] gi|94988989|ref|YP_597090.1| amino acid ABC transporter permease protein [Streptococcus pyogenes MGAS9429] gi|94990989|ref|YP_599089.1| amino acid ABC transporter permease [Streptococcus pyogenes MGAS10270] gi|94992882|ref|YP_600981.1| amino acid ABC transporter permease [Streptococcus pyogenes MGAS2096] gi|71803161|gb|AAX72514.1| amino acid ABC transporter permease protein [Streptococcus pyogenes MGAS6180] gi|94542497|gb|ABF32546.1| amino acid ABC transporter permease protein [Streptococcus pyogenes MGAS9429] gi|94544497|gb|ABF34545.1| Amino acid ABC transporter permease protein [Streptococcus pyogenes MGAS10270] gi|94546390|gb|ABF36437.1| Amino acid ABC transporter permease protein [Streptococcus pyogenes MGAS2096] Length = 297 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 18/211 (8%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W + + D+ P ++ + +TL + L++ A+++I ++ I +V Sbjct: 56 FSW-HAVFDAIPNII-QRLPITLGLTLSGATFGLVLALIFALVKIN-KVKLLYPIQAIFV 112 Query: 63 WIFRGTPLLVQLFVIFYGLP------HIGIVFDSFVAII-------ISLTLNFSAYISEI 109 RGTP+LVQL + +YG+P + FD V I + N +AY SE Sbjct: 113 SFLRGTPILVQLMLTYYGIPLFLKFLNQKYGFDWNVNAIPASIFAITAFAFNEAAYASET 172 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP-LSSEFISILKSTSVAST 168 IR++I+S+ G+ +A+ ++G+T Q R +I+P T A+P L + I + K TS+A Sbjct: 173 IRAAILSVDTGEIEAAKSLGMTSVQVYRRVIIPNA-TVVAIPTLINGLIGLTKGTSLAFN 231 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I E+F AQ + + Y+ Y +A VY Sbjct: 232 AGIVEMFAQAQILGGSDYRYFERYISVALVY 262 >gi|238028318|ref|YP_002912549.1| ABC amino acid transporter, inner membrane subunit [Burkholderia glumae BGR1] gi|237877512|gb|ACR29845.1| ABC amino acid transporter, inner membrane subunit [Burkholderia glumae BGR1] Length = 237 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 13/195 (6%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + +TL + +S + + +A R+ + + Y ++FRGTPL VQL + + Sbjct: 22 GVAITLWLLVVSIGLGFCLSVPLACARVSKRKWLAGAVW-LYTYVFRGTPLYVQLLLCYT 80 Query: 80 GL---------PHIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 GL P + F D +++ TLN AY +EI +I + G+ +A+ A G Sbjct: 81 GLYSLQAVRGTPLLNEFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATAYGEIEAARAYG 140 Query: 130 LTRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 ++ R +ILP + A+PL S+E I +L +T+VA T T+P+I + A+ + S TY Sbjct: 141 MSTFTLYRRVILPSALR-RALPLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMS 199 Query: 189 LIIYCELAFVYLILT 203 + A +YL ++ Sbjct: 200 FHAFGIAALLYLAIS 214 >gi|221197901|ref|ZP_03570947.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2M] gi|221204541|ref|ZP_03577558.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2] gi|221175398|gb|EEE07828.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2] gi|221181833|gb|EEE14234.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2M] Length = 250 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 104/201 (51%), Gaps = 7/201 (3%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L++ +FP ++L +A S V S +G + V +L++ F + FR Sbjct: 13 LLVGAFPDGPLGGAALSLVLAIASAVASAALGVGLGVAMALARGPARALLLAF-IGFFRA 71 Query: 68 TPLLVQLFVIFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 P+L+ +F ++ +P H + +++ +L L AY++ + + I++ GQW A Sbjct: 72 IPVLMLIFWTYFLMPILLHTDV--PGLASVVCALALVGGAYLAHAVHAGIVAAGAGQWQA 129 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVS 183 ++GLTR QT+RH++LPQ + +++++++K TS+A + +PE+ F Q Sbjct: 130 GLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNR 189 Query: 184 TTYQPLIIYCELAFVYLILTS 204 P I+ +A +YLI+ + Sbjct: 190 LMVYPAPIFLFVAAIYLIICT 210 >gi|220924348|ref|YP_002499650.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium nodulans ORS 2060] gi|219948955|gb|ACL59347.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 230 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 117/222 (52%), Gaps = 10/222 (4%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 F++I+++ P L + TL + ++ + +I+G IA++R+ + ++ YV Sbjct: 7 FSVIVNALPYLFLTGMTFTLTLTALAALGGVILGTLIAMMRLS-GLPVAPVVAKGYVNFM 65 Query: 66 RGTPLLVQLFVIFYGLPHIG---------IVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 R PL++ +F ++ +P+IG I +F + +++ TL +AY SEI+R+ I S Sbjct: 66 RSLPLVLVIFWFYFLVPYIGQWLTGADRPIQVGAFTSSLVTFTLFEAAYFSEIMRAGIQS 125 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IPKGQ A+ A+GLT Q++ +IILPQ L ++ I + + TS+ ++I + Sbjct: 126 IPKGQSAAASALGLTYWQSMSNIILPQAFRNMLPVLLTQTIVLFQDTSLVYVLSITDFLG 185 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVT 218 A ++ + + +Y A VY ++ F + +++ + Sbjct: 186 AASKVAQRDGRLVEMYLFAAVVYFVICFFASTLVRRLQRRIA 227 >gi|256831908|ref|YP_003160635.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Jonesia denitrificans DSM 20603] gi|256685439|gb|ACV08332.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Jonesia denitrificans DSM 20603] Length = 218 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 98/174 (56%), Gaps = 5/174 (2%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 ++ I+ P LL A + VTL + +S +I+ ++G +A+ R + I++++ F Sbjct: 8 WDAAIEVLPLLLEAFVKVTLYVTLVSSLIAAVLGLVLAIGR-RSAPRPIAVVLTFISDFI 66 Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R TP++VQL +Y + + + II ++++ Y++E+ R+ I S+P+GQW+A+ Sbjct: 67 RMTPIVVQLLFAYY----LFLDMEPITIGIIIFGIHYATYMAEVYRAGIDSVPQGQWEAT 122 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 A+ ++R +T +I+PQ + + L + IS+ K T IT+ EI + AQ Sbjct: 123 TALSMSRARTWIAVIIPQAVRATVPALGNYVISMFKDTPFLIAITVTEIVRAAQ 176 >gi|330837352|ref|YP_004411993.1| amino acid ABC transporter membrane protein 1, PAAT family [Spirochaeta coccoides DSM 17374] gi|329749255|gb|AEC02611.1| amino acid ABC transporter membrane protein 1, PAAT family [Spirochaeta coccoides DSM 17374] Length = 221 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 97/189 (51%), Gaps = 7/189 (3%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K+E D F + L+ + V+L + ISL++G + S I Y Sbjct: 6 KWEALFRNFDVFLEGLWVTVSVSLTALVATLAISLVVG-----LARTSGSRRSSRIAGAY 60 Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 + F+ TPL+VQ+ ++ LP IGI+ SF I L L A+ ++ ++I ++PKGQ Sbjct: 61 MSFFQNTPLVVQVLFLYNALPRIGIMLSSFAVGSIGLALYTGAFGGAVVEAAIRAVPKGQ 120 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ + G + Q++ +I+PQ + + P++++ ++++K++S+ + + ++ + Sbjct: 121 TEAALSQGFSHLQSMVMVIIPQAMRIALPPMANQLVNLIKNSSIMAMVAGGDLMYRSDSW 180 Query: 182 VSTT--YQP 188 S Y P Sbjct: 181 ASGNLYYGP 189 >gi|327463113|gb|EGF09434.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1] Length = 226 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 75/124 (60%), Gaps = 3/124 (2%) Query: 50 SDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG---IVFDSFVAIIISLTLNFSAYI 106 ++ + +V ++ TPLLVQ ++FYGLP + I+ + ++ + L AYI Sbjct: 50 KHKVLRGLARVFVEFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYI 109 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 +E+IRS I SIP+GQ +A+ + G T +T+R+IILPQ PL ++ ++++K+TS Sbjct: 110 AEVIRSGIQSIPRGQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTV 169 Query: 167 STIT 170 + I+ Sbjct: 170 AIIS 173 >gi|261820367|ref|YP_003258473.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261604380|gb|ACX86866.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 237 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 17/224 (7%) Query: 5 WFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWI 64 W LI+ F + L I+ +S I ++ G + ++ + II L Sbjct: 20 WLPLILKGFG--------LNLLISVLSMAIGMLAGTLLGAAQMA-NLAIIRLPARILTLF 70 Query: 65 FRGTPLLVQLFVIFYGLP-HIGIV-----FDSFVAIIISLTLNFSAYISEIIRSSIISIP 118 FR +P LV +F + + LP I I F +V +++L + S Y SEI+R + SIP Sbjct: 71 FRNSPWLVIMFYVMFLLPFEIKIAGTWFSFPDWVKAVVALAIPVSGYTSEIVRGGLKSIP 130 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 QW+A+ A+ +T IILPQ I P + + S++ +TS+A+ + + E+ Sbjct: 131 TTQWEAAAALAFGTVRTTLTIILPQAIRQMVPPTMNLYCSVVMATSLANVVGVQEVMTIT 190 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 Q I++T +P +I A+ ++ F ++ I + S + T+ Sbjct: 191 QTILTTETRPGLILP--AYSITLILFFAFVFPISLFSRRLERTW 232 >gi|311280247|ref|YP_003942478.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] gi|308749442|gb|ADO49194.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] Length = 238 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 117/233 (50%), Gaps = 27/233 (11%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 + FP L +A +T+ +A + VI L++ AV ++ I +V I RG P Sbjct: 3 EMFP--LASAAGMTVGLAVCALVIGLVLAMIFAVWE-SAKWRPVAWIGSAWVTILRGLPE 59 Query: 71 LVQLFVIFYGLP------------HIGIV----------FD--SFVAIIISLTLNFSAYI 106 ++ + I++G ++GIV FD F+ +I+L+L +SAY Sbjct: 60 ILVVLFIYFGSSQLLLLLSDGFTLNLGIVKIPVQMQIENFDVSPFLCGVIALSLLYSAYA 119 Query: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 S+ +R ++ ++P GQW++ A+GL++ +++PQ + L ++++ +LK T++ Sbjct: 120 SQTLRGALKAVPIGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALV 179 Query: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 S I++ ++ + I + T +P Y A +YL++T I +I+ T+ Sbjct: 180 SLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATR 232 >gi|134098326|ref|YP_001103987.1| amino acid ABC transporter, permease protein [Saccharopolyspora erythraea NRRL 2338] gi|133910949|emb|CAM01062.1| amino acid ABC transporter, permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 212 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 88/146 (60%), Gaps = 2/146 (1%) Query: 30 ISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV-F 88 ++ V SL++G +A +R+ + + + YV + R TPL + F + P + ++ F Sbjct: 21 LAGVGSLVLGTLLATLRVSPVPALRA-VGTGYVTLLRNTPLTLVFFFFVFAYPKLELLQF 79 Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 F A +I+LT+ SA++ E++RS I ++P GQ +A+ +IGL Q++ ++ILPQ Sbjct: 80 PFFTAAVIALTVYTSAFVCEVLRSGINTVPVGQAEAARSIGLGFAQSLTNVILPQAFRAV 139 Query: 149 AVPLSSEFISILKSTSVASTITIPEI 174 P+ S I++LK+T+VA+ ++ E+ Sbjct: 140 VPPMVSVLIALLKNTTVAAGFSVNEV 165 >gi|159899278|ref|YP_001545525.1| polar amino acid ABC transporter inner membrane subunit [Herpetosiphon aurantiacus ATCC 23779] gi|159892317|gb|ABX05397.1| polar amino acid ABC transporter, inner membrane subunit [Herpetosiphon aurantiacus ATCC 23779] Length = 269 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 87/155 (56%), Gaps = 17/155 (10%) Query: 61 YVWIFRGTPLLVQLFVIFYGL-PHIG---------IVFDSFVAIIISLTLNFSAYISEII 110 Y+ RG P+LV +F I + + P + + II+L L ++AYI+EI Sbjct: 98 YIEFIRGVPILVLIFTISFAIVPALSDWITINGQKLTVSLTARAIIALVLIYAAYIAEIF 157 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R+ I SI +GQ +A+ ++G+T Q +R++ILPQ L ++ I+ILK +S+ S + Sbjct: 158 RAGIESISRGQMEAARSLGMTHGQAMRYVILPQAFRNVLPALGNDLIAILKDSSLVSVLG 217 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSF 205 + EI Q ++ VS++++ Y E Y ILT+F Sbjct: 218 VREITQVSRLSVSSSFK----YEE---TYFILTAF 245 >gi|301793798|emb|CBW36189.1| putative amino acid ABC transporter, permease protein [Streptococcus pneumoniae INV104] gi|332204629|gb|EGJ18694.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA47901] Length = 219 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/192 (31%), Positives = 105/192 (54%), Gaps = 11/192 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +TL I+ I+ ++S IIG +AV+R + ++ +I Y+ R P L+ +F Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMR-NGKNPVLRIISSIYIEFVRNVPNLLWIFT 74 Query: 77 IFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF +VF S A I + TL SA ++EIIR + ++ KGQ++A + G T Q Sbjct: 75 IF-------LVFKMKSTPAGITAFTLFTSAALAEIIRGGLNTVDKGQYEAGMSQGFTSAQ 127 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYC 193 + +IILPQ I + S+F++++K TS+ S I + E+F +Q ++ ++P ++ Sbjct: 128 ILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFEPEQVFS 187 Query: 194 ELAFVYLILTSF 205 + LI SF Sbjct: 188 LCILIALIYFSF 199 >gi|330954114|gb|EGH54374.1| glutamine ABC transporter permease [Pseudomonas syringae Cit 7] Length = 233 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 107/211 (50%), Gaps = 10/211 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K++ ++ + +L+ I TL +A +++ +++ + + IR+ + L+ Y Sbjct: 4 KFDLSAILQGEYAELIVKGIETTLQLAFVAWCLAMAVALLLVSIRLTGNKYAERLVAG-Y 62 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 V R P LVQL + ++G+P + ++ +I+L L +AY SE IRS Sbjct: 63 VSYHRNVPTLVQLMLWYFGIPTLLSENTQIWLANYSTEYLFSVIALGLCQAAYFSEDIRS 122 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +IP GQ +AS A+GL +++R++ILPQ + L + + + K+TS+ I + Sbjct: 123 GLRAIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVV 182 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+ + + + T++ Y VYL ++ Sbjct: 183 ELTYATREVENYTFRTFEAYLVATVVYLAIS 213 >gi|149913101|ref|ZP_01901635.1| hypothetical protein RAZWK3B_03895 [Roseobacter sp. AzwK-3b] gi|149813507|gb|EDM73333.1| hypothetical protein RAZWK3B_03895 [Roseobacter sp. AzwK-3b] Length = 428 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 109/203 (53%), Gaps = 17/203 (8%) Query: 29 CISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFV----IFYGLPH 83 C+S +SL G +A+ R SD II I ++ RG PL+ LFV + Y LP Sbjct: 231 CVS--LSLPFGILLALGRQ--SDMPIIKWICVIFIEFIRGVPLITLLFVANVVLAYFLPP 286 Query: 84 IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 G FD + +II +T+ SAYI+E+IR + ++P+GQ++A+ ++GL Q++R IILPQ Sbjct: 287 -GSNFDLILRVIIMITMFASAYIAEVIRGGLAALPRGQYEAADSLGLDYAQSMRLIILPQ 345 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + S + + + + K T++ S I++ + +V P++ E VY L Sbjct: 346 ALKISIPGIVNVSVGLFKDTTLVSVISMFD-------LVGMIRGPILAATEWNGVYWELW 398 Query: 204 SFCYIIQIKIESSVTQHTYSVDK 226 F ++ + ++Q++ +++ Sbjct: 399 GFAVVLFFVVCYGISQYSQWLER 421 >gi|237745208|ref|ZP_04575689.1| amino acid permease [Fusobacterium sp. 7_1] gi|256026689|ref|ZP_05440523.1| amino acid permease protein SP0710 [Fusobacterium sp. D11] gi|289764684|ref|ZP_06524062.1| amino acid permease [Fusobacterium sp. D11] gi|229432437|gb|EEO42649.1| amino acid permease [Fusobacterium sp. 7_1] gi|289716239|gb|EFD80251.1| amino acid permease [Fusobacterium sp. D11] Length = 226 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 101/176 (57%), Gaps = 5/176 (2%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 +F +LLY + VT+ ++ IS + S+I G + + + I +I Y+ + R P L Sbjct: 14 NFERLLYG-LWVTIKLSLISAIFSIIFGILFGLF-MEIKNPITKIISQIYLQVIRIMPPL 71 Query: 72 VQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 V LF+ ++G+ I G+ + + II T+ +A + +++R SI SIPK Q +++ A+ L Sbjct: 72 VLLFITYFGVTRIYGVHISAETSAIIVFTIWGTAEMGDLVRGSIESIPKSQIESAMALAL 131 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFIS-ILKSTSVASTITIPEIFQTAQRIVSTT 185 +KQ ++I+PQ I +PLS I+ ++K+TS+ I I E+ + Q+I+ T Sbjct: 132 DKKQIYLYVIIPQ-IIRRLIPLSVNLITRMIKTTSLVVLIGIVEVLKVGQQIIDTN 186 >gi|237731568|ref|ZP_04562049.1| polar amino acid ABC transporter [Citrobacter sp. 30_2] gi|226907107|gb|EEH93025.1| polar amino acid ABC transporter [Citrobacter sp. 30_2] Length = 308 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 108/204 (52%), Gaps = 20/204 (9%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY----------GLPHI 84 S++IG +A+ R+ S +++ + Y+W+FR PL+V L V++ G+P Sbjct: 73 SIVIGGLLALARLS-SSWLLNGLAWGYIWLFRSLPLIVVLIVLYNFSYLYDTLTIGIPFT 131 Query: 85 GIVFDSFVAI---------IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 I + SF I ++ LTL SAY +EIIR + + GQ++A+ A+GL + Sbjct: 132 PIQWGSFETINVLGQFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAGRR 191 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCEL 195 IILPQ + T +E IS+ K T++ + +PE+F T Q I + T + + + Sbjct: 192 TLRIILPQALRTILPAGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVG 251 Query: 196 AFVYLILTSFCYIIQIKIESSVTQ 219 A YL++TS +IQ +E ++ + Sbjct: 252 AVWYLVITSVLSLIQHLVERALAR 275 >gi|297203990|ref|ZP_06921387.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sviceus ATCC 29083] gi|297148546|gb|EFH29017.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sviceus ATCC 29083] Length = 327 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 114/215 (53%), Gaps = 22/215 (10%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 +V+TL +A S V+ L+ G +A+ R+ S ++ + YVW R PL+V L ++ Sbjct: 79 GLVITLEVAAYSAVLGLLGGILLALARLSKSP-VLRAVSWTYVWALRSVPLIVLLLFLYN 137 Query: 80 ----------GLPHIGIVFDSF---------VAIIISLTLNFSAYISEIIRSSIISIPKG 120 G+P G F SF V ++ L+LN +AY +E++R I+S+ +G Sbjct: 138 FSALYKTLSVGVP-FGPAFFSFDESRLATDMVIAVVGLSLNEAAYAAEVVRGGILSVDQG 196 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ A+GL + R I+ PQ + + ++ I ++KSTS+ +++ ++F T Q Sbjct: 197 QHEAASALGLPKGYQFRKIVFPQALRSITPNYVNQLIGLIKSTSLVFYVSLLDLFGTVQS 256 Query: 181 IVSTTYQPLIIYCELAFV-YLILTSFCYIIQIKIE 214 + ST ++ +A V YLILTS ++Q +E Sbjct: 257 MGSTYPGDIVPLLLVATVWYLILTSAVSVVQFYVE 291 >gi|49475802|ref|YP_033843.1| amino acid permease [Bartonella henselae str. Houston-1] gi|49238609|emb|CAF27850.1| Amino acid permease [Bartonella henselae str. Houston-1] Length = 250 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/153 (32%), Positives = 88/153 (57%), Gaps = 7/153 (4%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISL----IMHFYVWIFRGTPLLVQLFVIFYGLPHI-- 84 S ++++ +G + +R + ++ + I + +V + R PLLVQ+F+ ++ +P I Sbjct: 47 SLILAIFLGVIVGTMRTLPNTSMTNCSFRTIGYIWVEVMRNIPLLVQVFLWYFVVPKIYP 106 Query: 85 -GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQ 143 I + + I +L SA I+E +RS I +I GQ A+ A+G T Q R+IILP+ Sbjct: 107 PAINYSPILLITCALGFFTSARIAEQVRSGIEAISSGQRYAAMAMGFTTYQIYRYIILPR 166 Query: 144 TITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 + T PL+SE + I+K++S+A ++I E+ Q Sbjct: 167 AMRTIMPPLTSEAMGIVKNSSIAFAVSINELMQ 199 >gi|289768689|ref|ZP_06528067.1| glutamate permease [Streptomyces lividans TK24] gi|289698888|gb|EFD66317.1| glutamate permease [Streptomyces lividans TK24] Length = 305 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 95/168 (56%), Gaps = 21/168 (12%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTI-----ISLIMHFYVWIFRGTPLLVQLFVIF 78 TL A +S VI+L +G + + R+ SD +++++ F FR P+LV ++ Sbjct: 81 TLKAAALSMVIALPLGAVLGIARL--SDHAWVRIPVAIVVEF----FRSIPVLV---LMI 131 Query: 79 YGL----PHIGIVFDS--FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 +GL + + D A++ L L ++ ++EI+R+ I+++PKGQ + + AIGL + Sbjct: 132 FGLALFAEYTDVSSDDRPLYAVVTGLVLYNASVLAEIVRAGILALPKGQAEGAMAIGLRK 191 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI-TIPEIFQTAQ 179 Q++R I+LPQ +TT + S+ + ILK T++ + T PE+ +A Sbjct: 192 GQSMRLILLPQAVTTMLPAIVSQLVVILKDTALGGAVLTFPELLASAN 239 >gi|289671885|ref|ZP_06492775.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae FF5] Length = 306 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 24/211 (11%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY----------GLPHI 84 S+I+G +A+ R+ S + +L Y+W FR P L+ L +++ G+P Sbjct: 75 SIILGTALALARLSGSPLLAALAWG-YIWFFRSMPALLVLIILYNFAYLYDHIVLGVPFT 133 Query: 85 GIVF---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +VF F ++ L+L SAY +EIIR +I + GQ +A+ A+GL + Sbjct: 134 QLVFAEWSTVDVLSQFTVAVLGLSLMQSAYTAEIIRGGLIGVDAGQHEAAAALGLPVSRR 193 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYC 193 I IILPQ + + +E I ++K TS+ + +PE+F T Q I + T PL+I Sbjct: 194 IFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVA 253 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 + YLI+T+ Q +E + + V Sbjct: 254 TV--WYLIITTVLTSAQYYVERHFARGSARV 282 >gi|239629434|ref|ZP_04672465.1| L-cystine transport system permease protein tcyL [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239528120|gb|EEQ67121.1| L-cystine transport system permease protein tcyL [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 228 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 101/184 (54%), Gaps = 13/184 (7%) Query: 36 LIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH----IGIVFDSF 91 L+ G I+++ F ++ L+ + +V + R TP+L+ L ++FYG+P +GI + Sbjct: 32 LVFGSLISLVH-FSHSRVLELLYNGFVSLMRATPVLLLLMLVFYGMPLLFQLVGIDISWW 90 Query: 92 VA---IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 I+++ L SAY SE +RS+ S+P+ Q+DA ++ +R IR I+ PQ S Sbjct: 91 AKTSFAILAIGLENSAYFSENLRSAYASLPQSQYDACTSLHFSRIAAIRRILGPQVFAAS 150 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY--QPLIIYCELAFVYLILTSFC 206 + + I+I+K+++ I I ++++ AQ I ++ Q ++++ L+ +Y + C Sbjct: 151 LPNIGNTLITIVKNSAYVYVIGITDLYEQAQIIAQASFGKQQVVVFIALSLIYW---AIC 207 Query: 207 YIIQ 210 IQ Sbjct: 208 AAIQ 211 >gi|21910934|ref|NP_665202.1| putative amino acid ABC transporter permease [Streptococcus pyogenes MGAS315] gi|28895376|ref|NP_801726.1| amino acid ABC transproter (permease protein) [Streptococcus pyogenes SSI-1] gi|21905141|gb|AAM80005.1| putative amino acid ABC transproter (permease protein) [Streptococcus pyogenes MGAS315] gi|28810622|dbj|BAC63559.1| putative amino acid ABC transproter (permease protein) [Streptococcus pyogenes SSI-1] Length = 267 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 107/212 (50%), Gaps = 20/212 (9%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W + + D+ P ++ + +TL + L++ A+++I ++ I +V Sbjct: 26 FSW-HAVFDAIPNII-QRLPITLGLTLSGATFGLVLALIFALVKIN-KVKLLYPIQAIFV 82 Query: 63 WIFRGTPLLVQLFVIFYGLP--------------HIGIVFDSFVAIIISLTLNFSAYISE 108 RGTP+LVQL + +YG+P ++ + S AI + N +AY SE Sbjct: 83 SFLRGTPILVQLMLTYYGIPLFLKCLNQKYGFDWNVNAIPASIFAIT-AFAFNEAAYASE 141 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP-LSSEFISILKSTSVAS 167 IR++I+S+ G+ +A+ ++G+T Q R +I+P T A+P L + I + K TS+A Sbjct: 142 TIRAAILSVDTGEIEAAKSLGMTSVQVYRRVIIPNA-TVVAIPTLINGLIGLTKGTSLAF 200 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I E+F AQ + + Y+ Y +A VY Sbjct: 201 NAGIVEMFAQAQILGGSDYRYFERYISVALVY 232 >gi|194397718|ref|YP_002037266.1| ABC transporter permease [Streptococcus pneumoniae G54] gi|194357385|gb|ACF55833.1| ABC transporter, permease protein [Streptococcus pneumoniae G54] Length = 219 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/192 (31%), Positives = 105/192 (54%), Gaps = 11/192 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +TL I+ I+ ++S IIG +AV+R + ++ +I Y+ R P L+ +F Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMR-NGKNPVLRIISSIYIEFVRNVPNLLWIFT 74 Query: 77 IFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF +VF S A I + TL SA ++EIIR + ++ KGQ++A + G T Q Sbjct: 75 IF-------LVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQ 127 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYC 193 + +IILPQ I + S+F++++K TS+ S I + E+F +Q ++ ++P ++ Sbjct: 128 ILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFEPEQVFS 187 Query: 194 ELAFVYLILTSF 205 + LI SF Sbjct: 188 LYILIALIYFSF 199 >gi|152969145|ref|YP_001334254.1| putative binding-protein-dependent transport systems inner membrane component [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893601|ref|YP_002918335.1| putative binding-protein-dependent transport system inner membrane component [Klebsiella pneumoniae NTUH-K2044] gi|330007452|ref|ZP_08305951.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|150953994|gb|ABR76024.1| putative binding-protein-dependent transport systems inner membrane component [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238545917|dbj|BAH62268.1| putative binding-protein-dependent transport system inner membrane component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328535463|gb|EGF61931.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 221 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 95/179 (53%), Gaps = 7/179 (3%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 DSF L+A + + + A + +I + + +F + +I+ I+ +V + R P Sbjct: 12 DSFIAGLFATLELFITAALAALIIGIALCYFSE-----YQKKVINRIIIGFVSLMRAIPF 66 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L+ ++++YGLP +GI + + A +++L + AY EI+RS G +A+ A G Sbjct: 67 LILAYLLYYGLPQLGISMEPWTAGLLALIIYHGAYFFEILRSQRRVFSGGYIEAAIAQGF 126 Query: 131 TRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 +R R IILP I +SA+PL ++ I LK T+ S IT+ EI A + +T + P Sbjct: 127 SRYAIFRRIILP-NIVSSALPLIGNQLIICLKDTAFLSIITVQEITAAANSVQATYFIP 184 >gi|15888896|ref|NP_354577.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15156666|gb|AAK87362.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 385 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 6/196 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ ++VTL ++ +SL G +A+ R + +I ++ ++ + RG PL+ LF Sbjct: 172 LWGGLMVTLILSFFGITVSLPFGILLALGRRS-NLPVIKMLCVLFIEVIRGIPLITVLFF 230 Query: 77 IFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G FD F+ ++ ++L SAY++E+IR + +IPKGQ++ + ++GL Sbjct: 231 ASIMLPLFLPDGWTFDKFLRALVGVSLFSSAYMAEVIRGGLQAIPKGQYEGADSLGLNYW 290 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ--TAQRIVSTTYQPLII 191 Q R I+LPQ + + + FI + K TS+ S I + ++ T + + P+ Sbjct: 291 QKTRLIVLPQALKLVIPGIVNTFIGLFKDTSLVSIIGMFDLLGIVTLNQADANWATPVTA 350 Query: 192 YCELAFVYLILTSFCY 207 F + FC+ Sbjct: 351 MTGYIFAGFVFWIFCF 366 >gi|163858458|ref|YP_001632756.1| amino acids ABC transporter, permease protein [Bordetella petrii DSM 12804] gi|163262186|emb|CAP44488.1| amino acids ABC transporter, permease protein [Bordetella petrii] Length = 231 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 20/202 (9%) Query: 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFS---DTIISLIMHFYVWIFRGTPLLV 72 +L I VTL + F +L GF +A++ + ++ ++ YV R P +V Sbjct: 16 MLTTGITVTLRL----FAGALAGGFLLAMVLTGINLIPSRLVRAVVALYVEYHRNVPTVV 71 Query: 73 QLFVIFYGLPHI-----------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 Q+ V ++G+P I G SF +I+L+LN SAY E IRS I +IP Q Sbjct: 72 QILVWYFGMPEILPEAIRVWINQGNTEFSFA--LIALSLNVSAYYYEDIRSGIRAIPATQ 129 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ +IGL Q + +++LPQ + + P+ + I + K TS+A I + ++ +RI Sbjct: 130 VEAARSIGLGAVQALIYVVLPQAVRYAVPPIINRSIILFKDTSLAMVIGVTDLTYQTKRI 189 Query: 182 VSTTYQPLIIYCELAFVYLILT 203 + T+Q I+ +YL + Sbjct: 190 ENATFQTFQIFMISTLIYLCMA 211 >gi|54309259|ref|YP_130279.1| arginine transporter permease subunit ArtQ [Photobacterium profundum SS9] gi|46913691|emb|CAG20477.1| Putative arginine ABC transporter, permease protein [Photobacterium profundum SS9] Length = 229 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 102/181 (56%), Gaps = 14/181 (7%) Query: 35 SLIIGFFIAVIRIFFSDT-----IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI----- 84 SL++G +AVI F S +++ +V I RG P ++ + IF+G + Sbjct: 24 SLLVGLVLAVI--FASGEMSRSRLVAWPTTAFVTILRGLPEILVVLFIFFGSGQVLFMIT 81 Query: 85 GIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 G D FV+ +I+L+L F++Y ++ IR ++ ++ GQ +A+ A+G+++ + IILP Sbjct: 82 GDYVDISPFVSGVIALSLIFASYAAQTIRGALKAVNNGQREAASALGISKAHSFFRIILP 141 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + + L+++++ +LK T++ S I + ++ + AQ + T++ Y A +YL++ Sbjct: 142 QAVRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVI 201 Query: 203 T 203 T Sbjct: 202 T 202 >gi|91977032|ref|YP_569691.1| amino acid ABC transporter permease [Rhodopseudomonas palustris BisB5] gi|91683488|gb|ABE39790.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodopseudomonas palustris BisB5] Length = 502 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 106/214 (49%), Gaps = 15/214 (7%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHF---YVWIFRGTPLLVQL 74 + ++VTL ++ V S+ IG +A+ R + I LI F ++ +RG PL+ L Sbjct: 290 WGGLLVTLVVSVTGIVGSMPIGIALALGR----RSTIPLIRLFCIGFIEFWRGVPLITVL 345 Query: 75 FVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 F Y LP D + ++I + L AY +E++R + +IP+GQ +A+ A+GL+ Sbjct: 346 FFATYMLPLFLPGNFTIDGLLRVLIGIALFAGAYNAEVVRGGLNAIPRGQGEAASALGLS 405 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIF-QTAQRIVSTTYQ-PL 189 +T I+LPQ + L + FI++ K TS+ S + + ++ Q T+ P Sbjct: 406 YAKTTGLIVLPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLGQLRAAFADPTWSTPN 465 Query: 190 IIYCELAFVYLILTSFCYII---QIKIESSVTQH 220 ++ AF LI FC+ + + +E + H Sbjct: 466 TLFTGFAFTGLIYFVFCFGMSRYSLFVEHRLNAH 499 >gi|218892769|ref|YP_002441638.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|218772997|emb|CAW28809.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 214 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 100/197 (50%), Gaps = 4/197 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I ++ +I ++G ++R SL + + +FR PLL+Q FV+ Sbjct: 21 TLAITAMAMLIGTLLGVVFGLLRALLPRA--SLPLAALLDVFRSVPLLIQ-FVLLNSFKS 77 Query: 84 I-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 I G+ + +F + L + +AY +E++R ++S+P A+ ++GL+ +Q + HI+LP Sbjct: 78 ILGLDWSAFAVACLVLGVYAAAYCTEVVRGGVLSVPPSVRRAARSLGLSYRQDLFHIVLP 137 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + + +S++K TS+ I I E+ + +Q IV+ +PL + C VY ++ Sbjct: 138 MAARVAFPGWVNLTLSVMKDTSLVLWIGIVELLRASQTIVTRIQEPLFVLCIAGLVYYLM 197 Query: 203 TSFCYIIQIKIESSVTQ 219 + + ++E Q Sbjct: 198 SWVIARLGARLERRWQQ 214 >gi|19746578|ref|NP_607714.1| amino acid ABC transproter (permease protein) [Streptococcus pyogenes MGAS8232] gi|19748793|gb|AAL98213.1| putative amino acid ABC transproter (permease protein) [Streptococcus pyogenes MGAS8232] Length = 297 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 18/211 (8%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W + + D+ P ++ + +TL + L++ A+++I ++ I +V Sbjct: 56 FSW-HAVFDAIPNII-QRLPITLGLTLSGATFGLVLALIFALVKIN-KVKLLYPIQAIFV 112 Query: 63 WIFRGTPLLVQLFVIFYGLP------HIGIVFDSFVAII-------ISLTLNFSAYISEI 109 RGTP+LVQL + +YG+P + FD V I + N +AY SE Sbjct: 113 SFLRGTPILVQLMLTYYGIPLFLKFLNQKYGFDWNVNAIPASIFAITAFAFNEAAYASET 172 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP-LSSEFISILKSTSVAST 168 IR++I+S+ G+ +A+ ++G+T Q R +I+P T A+P L + I + K TS+A Sbjct: 173 IRAAILSVDTGEIEAAKSLGMTSVQVYRRVIIPNA-TVVAIPTLINGLIGLTKGTSLAFN 231 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I E+F AQ + + Y+ Y +A VY Sbjct: 232 AGIVEMFAQAQILGGSDYRYFERYISVALVY 262 >gi|134293670|ref|YP_001117406.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia vietnamiensis G4] gi|134136827|gb|ABO57941.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Burkholderia vietnamiensis G4] Length = 594 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/232 (28%), Positives = 117/232 (50%), Gaps = 30/232 (12%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EWF P +L + + TL + + V +G +A+ R+ S +++ +VW Sbjct: 67 EWF-----LSPPVL-SGLARTLVLTVLGAVFGFALGALVALARLSRS-RLLAASAWTFVW 119 Query: 64 IFRGTPLLVQLFV----------IFYGLPHIGIV-FDS--------FVAIIISLTLNFSA 104 +FR PL+V L + + G+P IV FD+ F A ++ LTLN +A Sbjct: 120 LFRSIPLIVLLLILNNLGYLYEHVRLGVPFTDIVWFDTPTTDLISPFFAAVLGLTLNHAA 179 Query: 105 YISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 + +E+IR I+++ +GQ +A+ A+GL R + I+LPQ + ++ I++ K TS Sbjct: 180 FSAEVIRGGILAVDQGQLEAAAALGLPRGRQTTRIVLPQAMRAILPTAFNDLITLAKGTS 239 Query: 165 VASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFVYLILTSFCYIIQIKIE 214 + + +PE+F T Q I PL++ + YLI+ + IQ+++E Sbjct: 240 MVYVLAMPELFYTVQVIYRRNLDVIPLLMVATV--WYLIILTVLSAIQVQVE 289 >gi|307730960|ref|YP_003908184.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307585495|gb|ADN58893.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 225 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 99/187 (52%), Gaps = 11/187 (5%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 ++W I + P L AIV T I I+ VI +I G +A++R+ S YV Sbjct: 4 FDWSG-IPGAMPTLWTGAIV-TFKITLIAIVIGIIWGTVLAMLRLS-SFKPFEWFAKGYV 60 Query: 63 WIFRGTPLLVQLFVIFYGLPHI-----GIVFD---SFVAIIISLTLNFSAYISEIIRSSI 114 IFR PL++ L F +P + G+ D + +++ +L +AY SEIIR+ I Sbjct: 61 TIFRSIPLVMVLLWFFLIVPQVLQNVLGLSADIDIRLASAMVAFSLFEAAYYSEIIRAGI 120 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 ++P+GQ +A+YA+G+ Q +R I+LPQ L ++ I + + TS+ I++ + Sbjct: 121 QAVPRGQVNAAYALGMGYGQAMRLIVLPQAFRAMVPLLLTQGIVLFQDTSLVYVISLADF 180 Query: 175 FQTAQRI 181 F+TA I Sbjct: 181 FRTATNI 187 >gi|167828955|ref|ZP_02460426.1| amino acid ABC transporter, ATP-binding/permease protein [Burkholderia pseudomallei 9] Length = 300 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 108/206 (52%), Gaps = 26/206 (12%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV----------IFYGLPHIGIV 87 +G +A+ R+ S +++ F +W+FR PL+V L + + G+P GI Sbjct: 81 LGVPLALARVSRSPLLVACAWAF-IWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTGIT 139 Query: 88 F---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 F F A ++ LTLN +A+ +E IR I+S+ +GQ +A+ A+GL R + Sbjct: 140 FAEVATTDLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATR 199 Query: 139 IILPQTITTSAVPLS-SEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCEL 195 I+LPQ + + +P++ ++ I++ K +S+ + +PE+F T Q I + PL++ + Sbjct: 200 IVLPQAM-RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATV 258 Query: 196 AFVYLILTSFCYIIQIKIESSVTQHT 221 YLI+ + I+Q ++E + Sbjct: 259 --WYLIILTVLSIVQAQVERRYARGA 282 >gi|99080137|ref|YP_612291.1| amino acid ABC transporter permease [Ruegeria sp. TM1040] gi|99036417|gb|ABF63029.1| Amino acid ABC transporter permease protein 3-TM region His/Glu/Gln/Arg/opine [Ruegeria sp. TM1040] Length = 442 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 109/208 (52%), Gaps = 14/208 (6%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTII--SLIMHFYVWIF 65 L ++S + ++++ I ++ +SL IG +A+ R SD +I +L + F +I Sbjct: 223 LALESVESRQFGGFMLSILIGVVAIGLSLPIGIVLALGRQ--SDLLIVKTLCVGFIEFI- 279 Query: 66 RGTPLLVQLFV------IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 RG PL+ LFV IF +P G FD + + I +TL SAY++E+IR + ++PK Sbjct: 280 RGVPLITLLFVASTLLNIF--MPP-GTNFDIIMRVFIMVTLFASAYMAEVIRGGLAALPK 336 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++ + ++GL Q R II+PQ + S + S FI + K T++ S I + + Sbjct: 337 GQYEGADSLGLNYWQAQRLIIMPQALKISIPGIVSTFIGVFKDTTLVSVIGLFDPLNLTN 396 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCY 207 I + +++ F+ L+ FC+ Sbjct: 397 AIRADANWNGLVWELYGFIALLFFVFCF 424 >gi|260426627|ref|ZP_05780606.1| glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztC [Citreicella sp. SE45] gi|260421119|gb|EEX14370.1| glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztC [Citreicella sp. SE45] Length = 438 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/148 (33%), Positives = 84/148 (56%), Gaps = 5/148 (3%) Query: 64 IFRGTPLLVQLF----VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 + RG PL+V LF ++ Y LP G FD + +II +TL SAYI+E++R + ++PK Sbjct: 274 VIRGVPLIVWLFTASLLLNYFLPP-GTNFDLMLRVIIMVTLFSSAYIAEVVRGGLAALPK 332 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A+ A+GL +++R +ILPQ + S + + FI + K T++ I + + + Sbjct: 333 GQYEAADALGLDYWKSMRLVILPQALKISIPGIVNTFIGLFKDTTLVVFIGLLDPIGLSN 392 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSFCY 207 I ++T I + F+ L FC+ Sbjct: 393 AIRASTEWNGIYWELFVFIGLCFFIFCF 420 >gi|229591450|ref|YP_002873569.1| putative amino acid ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229363316|emb|CAY50435.1| putative amino acid ABC transporter, permease protein [Pseudomonas fluorescens SBW25] Length = 233 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 105/202 (51%), Gaps = 10/202 (4%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 + +L+ I +TL +A ++++++++ + +R+ + + ++ YV R P Sbjct: 13 GEYAELIVKGIEMTLQLALFAWLLAMVLALTLVTVRLT-GNKLADRLVAGYVSYHRNVPT 71 Query: 71 LVQLFVIFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 LVQL + ++G+P + ++ +I+L L +AY E IRS + +IP GQ Sbjct: 72 LVQLMLWYFGVPTLLSESAQLWLANHNTEYLFSVIALGLCQAAYFCEDIRSGLRAIPAGQ 131 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +AS A+GL +++R++ILPQ + L + + + K+TS+A I + E+ ++ + Sbjct: 132 TEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLAMAIGVVELTYASREV 191 Query: 182 VSTTYQPLIIYCELAFVYLILT 203 + T++ Y YL+ + Sbjct: 192 ENYTFRTFESYLVATVFYLVFS 213 >gi|227877754|ref|ZP_03995788.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256843607|ref|ZP_05549095.1| ABC amino acid transporter [Lactobacillus crispatus 125-2-CHN] gi|256850083|ref|ZP_05555513.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-1A-US] gi|312984336|ref|ZP_07791678.1| amino acid ABC transporter, permease protein [Lactobacillus crispatus CTV-05] gi|227862657|gb|EEJ70142.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256615027|gb|EEU20228.1| ABC amino acid transporter [Lactobacillus crispatus 125-2-CHN] gi|256713055|gb|EEU28046.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-1A-US] gi|310894261|gb|EFQ43341.1| amino acid ABC transporter, permease protein [Lactobacillus crispatus CTV-05] Length = 223 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 104/194 (53%), Gaps = 5/194 (2%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L+ A + ++ IA +S +I L +G ++R + I ++ Y+ FR P Sbjct: 13 SNFARLM-AGLWTSIWIAALSLIIGLAVGTIFGILRTL-KNRPIRFVLRLYLEFFRIVPT 70 Query: 71 LVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +V L++++Y LP + + + + +++ ++ +A S+I+R ++ S+PK Q ++ A+G Sbjct: 71 VVLLYLVYYILPRSLHVNWPATWMAVLAFSMWVAAEFSDIVRGALESVPKTQRESGLALG 130 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ-- 187 L R Q R+++LPQ + + ++K+TS+ I I E+ Q+I+ Q Sbjct: 131 LNRLQLFRYVLLPQAVKLELPATINLATRVIKTTSLLMIINIMEVINVGQQIIEANNQQY 190 Query: 188 PLIIYCELAFVYLI 201 P ++ F++++ Sbjct: 191 PAGVFWVYGFIFIL 204 >gi|224367958|ref|YP_002602121.1| GltJ1 [Desulfobacterium autotrophicum HRM2] gi|223690674|gb|ACN13957.1| GltJ1 [Desulfobacterium autotrophicum HRM2] Length = 242 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 106/213 (49%), Gaps = 12/213 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++W L + + L + + T+ + I +SL++G I RI + + + Y Sbjct: 5 DFKWSILWEEPYGGWLLSGVATTVKLGIICCFLSLLMGIIIGTFRIT-RNRPLRIFAEAY 63 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-----------GIVFDSFVAIIISLTLNFSAYISEII 110 FR PLLVQLF ++ +P + I F +++ L+L S+ ++E I Sbjct: 64 TEFFRDIPLLVQLFFWYFAMPTLLPEQTRIWMYQEIPNFEFWIVVVGLSLYSSSRMAEQI 123 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R+ I SI Q +A+ + G + Q R+IILP + PL++E +++ K+T++A T+ Sbjct: 124 RAGINSISPDQLNAALSSGFSHYQAYRYIILPLAVRLVIPPLTTEALTVFKNTALAMTVG 183 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 + E +Q++ + T+ L +Y+I+T Sbjct: 184 VLETTFMSQQVEAYTFHGLEATTAACIIYMIIT 216 >gi|209546302|ref|YP_002278192.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539159|gb|ACI59092.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 241 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 106/206 (51%), Gaps = 13/206 (6%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 + LL A ++TL + + I ++G +A ++ + +++L + Y +FRG P L Sbjct: 13 GWGALLILATLMTLAVTATALAIGAVLGAIVAGAKLSGNPFLVAL-GNVYTTVFRGVPEL 71 Query: 72 VQLFVIFYG----LPHIGIVFD--------SFVAIIISLTLNFSAYISEIIRSSIISIPK 119 + +++I++G + IG SF A +++ + +Y +E+ R + ++I K Sbjct: 72 LIIYLIYFGGSSAVTSIGKAMGYEGFLGLPSFAAGALAVGIISGSYQAEVFRGAFLAISK 131 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 G+ +A+ AIG+ R R II+PQ + + L + + LK +++ S + E+ +T+Q Sbjct: 132 GELEAASAIGMHRAMRFRRIIMPQVLRLAIPGLGNVWQLSLKDSALISVTGLAELMRTSQ 191 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSF 205 +T Q + + +YLILTS Sbjct: 192 VAAGSTRQYFLFFIAGGCLYLILTSL 217 >gi|15641372|ref|NP_231004.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587995|ref|ZP_01677747.1| amino acid ABC transporter, permease protein [Vibrio cholerae 2740-80] gi|121728528|ref|ZP_01681551.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52] gi|147674160|ref|YP_001216919.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|153212686|ref|ZP_01948343.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587] gi|153819357|ref|ZP_01972024.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC 8457] gi|153825276|ref|ZP_01977943.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-2] gi|153828797|ref|ZP_01981464.1| amino acid ABC transporter, permease protein [Vibrio cholerae 623-39] gi|183179358|ref|ZP_02957569.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-3] gi|227081531|ref|YP_002810082.1| amino acid ABC transporter, permease protein [Vibrio cholerae M66-2] gi|229505059|ref|ZP_04394569.1| amino acid ABC transporter permease protein [Vibrio cholerae BX 330286] gi|229511271|ref|ZP_04400750.1| amino acid ABC transporter permease protein [Vibrio cholerae B33] gi|229515732|ref|ZP_04405191.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA 21] gi|229518389|ref|ZP_04407833.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9] gi|229523538|ref|ZP_04412943.1| amino acid ABC transporter permease protein [Vibrio cholerae bv. albensis VL426] gi|229529564|ref|ZP_04418954.1| amino acid ABC transporter permease protein [Vibrio cholerae 12129(1)] gi|229608063|ref|YP_002878711.1| amino acid ABC transporter permease protein [Vibrio cholerae MJ-1236] gi|254848482|ref|ZP_05237832.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255745747|ref|ZP_05419695.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS 101] gi|262158975|ref|ZP_06030087.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE 91/1] gi|262169334|ref|ZP_06037026.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27] gi|298498556|ref|ZP_07008363.1| amino acid ABC transporter [Vibrio cholerae MAK 757] gi|9655853|gb|AAF94518.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547736|gb|EAX57827.1| amino acid ABC transporter, permease protein [Vibrio cholerae 2740-80] gi|121629192|gb|EAX61632.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52] gi|124116336|gb|EAY35156.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587] gi|126510102|gb|EAZ72696.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC 8457] gi|146316043|gb|ABQ20582.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|148875750|gb|EDL73885.1| amino acid ABC transporter, permease protein [Vibrio cholerae 623-39] gi|149741104|gb|EDM55163.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-2] gi|183012769|gb|EDT88069.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-3] gi|227009419|gb|ACP05631.1| amino acid ABC transporter, permease protein [Vibrio cholerae M66-2] gi|227013277|gb|ACP09487.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|229333338|gb|EEN98824.1| amino acid ABC transporter permease protein [Vibrio cholerae 12129(1)] gi|229337119|gb|EEO02136.1| amino acid ABC transporter permease protein [Vibrio cholerae bv. albensis VL426] gi|229345104|gb|EEO10078.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9] gi|229347501|gb|EEO12461.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA 21] gi|229351236|gb|EEO16177.1| amino acid ABC transporter permease protein [Vibrio cholerae B33] gi|229357282|gb|EEO22199.1| amino acid ABC transporter permease protein [Vibrio cholerae BX 330286] gi|229370718|gb|ACQ61141.1| amino acid ABC transporter permease protein [Vibrio cholerae MJ-1236] gi|254844187|gb|EET22601.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255736822|gb|EET92219.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS 101] gi|262022147|gb|EEY40856.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27] gi|262029160|gb|EEY47812.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE 91/1] gi|297542889|gb|EFH78939.1| amino acid ABC transporter [Vibrio cholerae MAK 757] gi|327484030|gb|AEA78437.1| Amino acid ABC transporter, permease protein [Vibrio cholerae LMA3894-4] Length = 365 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 8/195 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFV 76 + ++VTL IA + + SL IG +A+ R SD II + Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIIASLPIGVALALGRR--SDMPIIRSLCTVYIEVWRGVPLITVLFM 212 Query: 77 IFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G D + +I + + +AY++E+IR + +IPKGQ++A+ A+GL+ Sbjct: 213 ASVMLPLFLSQGSEIDKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYW 272 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + + IILPQ + + + + FI + K TS+ I + ++ Q +T L Sbjct: 273 KKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQS-ANTDPNWLGFAT 331 Query: 194 E-LAFVYLILTSFCY 207 E FV L+ FC+ Sbjct: 332 ESYVFVALVFWIFCF 346 >gi|15675528|ref|NP_269702.1| putative amino acid ABC transporter permease [Streptococcus pyogenes M1 GAS] gi|71911176|ref|YP_282726.1| amino acid ABC transporter permease [Streptococcus pyogenes MGAS5005] gi|13622728|gb|AAK34423.1| putative amino acid ABC transproter (permease protein) [Streptococcus pyogenes M1 GAS] gi|71853958|gb|AAZ51981.1| amino acid ABC transporter permease protein [Streptococcus pyogenes MGAS5005] Length = 267 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 18/211 (8%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W + + D+ P ++ + +TL + L++ A+++I ++ I +V Sbjct: 26 FSW-HAVFDAIPNII-QRLPITLGLTLSGATFGLVLALIFALVKIN-KVKLLYPIQAIFV 82 Query: 63 WIFRGTPLLVQLFVIFYGLP------HIGIVFDSFVAII-------ISLTLNFSAYISEI 109 RGTP+LVQL + +YG+P + FD V I + N +AY SE Sbjct: 83 SFLRGTPILVQLMLTYYGIPLFLKFLNQKYGFDWNVNAIPASIFAITAFAFNEAAYASET 142 Query: 110 IRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP-LSSEFISILKSTSVAST 168 IR++I+S+ G+ +A+ ++G+T Q R +I+P T A+P L + I + K TS+A Sbjct: 143 IRAAILSVDTGEIEAAKSLGMTSVQVYRRVIIPNA-TVVAIPTLINGLIGLTKGTSLAFN 201 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I E+F AQ + + Y+ Y +A VY Sbjct: 202 AGIVEMFAQAQILGGSDYRYFERYISVALVY 232 >gi|163736869|ref|ZP_02144287.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis BS107] gi|161389473|gb|EDQ13824.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis BS107] Length = 273 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 18/180 (10%) Query: 59 HFYVWIFRGTPLLVQL-FVIFYGLP-----------HIGI------VFDSFVAIIISLTL 100 FY+ + RG P++V L +V F P HIG+ F II+L + Sbjct: 90 RFYIEVVRGIPIIVLLLYVAFVLAPALVELRNWLGDHIGLDPIRTRNFPLLWRAIIALMI 149 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 +SA+ISE+ R+ + S+ +GQ +A+ ++GL+R R I+ PQ I T PL ++F++++ Sbjct: 150 AYSAFISEVFRAGLQSVDEGQIEAAKSLGLSRWHRFRFIVFPQAIRTILPPLGNDFVALV 209 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 K +S+ S + + ++ Q + ++ Y +A +YL LT ++ + E + + Sbjct: 210 KDSSLVSVLGVADVTQLGKLTAVGNFRYFETYNVVALIYLTLTIGLSLLLRRFEKHLRRR 269 >gi|148988973|ref|ZP_01820373.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] gi|147925470|gb|EDK76547.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] Length = 219 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 104/192 (54%), Gaps = 11/192 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +TL I+ I+ ++S IIG +AV+R + I+ +I Y+ R P L+ +F Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMR-NGKNPILRIISSIYIEFVRNVPNLLWIFT 74 Query: 77 IFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF +VF S A I + TL SA ++EIIR + ++ KGQ++A + G T Q Sbjct: 75 IF-------LVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQ 127 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYC 193 + +IILPQ I + S+F+ ++K TS+ S I + E+F +Q ++ ++P ++ Sbjct: 128 ILYYIILPQAIRKMLPAIISQFVPVIKDTSLLYSVIALQELFGASQILMGRYFEPEQVFS 187 Query: 194 ELAFVYLILTSF 205 + LI SF Sbjct: 188 LYILIALIYFSF 199 >gi|46580745|ref|YP_011553.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|120601967|ref|YP_966367.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris DP4] gi|46450165|gb|AAS96813.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio vulgaris str. Hildenborough] gi|120562196|gb|ABM27940.1| amino acid ABC transporter membrane protein 2, PAAT family [Desulfovibrio vulgaris DP4] gi|311234459|gb|ADP87313.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris RCH1] Length = 230 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/230 (23%), Positives = 119/230 (51%), Gaps = 14/230 (6%) Query: 1 MKYE--WFN---LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIIS 55 M+++ W N L++ S+P + +++ +A + +G ++R+ + Sbjct: 1 MQWDVVWNNMNYLLVGSYPDGPLGGMAMSILLAIGGIFGAFWLGLAFGLMRLS-EKWWVR 59 Query: 56 LIMHFYVWIFRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 YV + RG PLL+ +F ++ P +G + +I+ + AYI+EI+R+ + Sbjct: 60 APAIVYVEVIRGIPLLMLIFWFYFLAPIALGHTLPEAESALIAFIVFTGAYIAEIVRAGV 119 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +++P GQ +A+ GL++ Q + +ILPQ + ++F+S+ K TS+A I + E+ Sbjct: 120 LALPAGQMEAARGTGLSKTQAMLFVILPQALRNMIPSFVNQFVSLTKDTSLAYIIGVSEL 179 Query: 175 FQTAQRIVSTTY-QPLIIYCELAFVYLILTSFCYIIQI---KIESSVTQH 220 +TA ++ + T P I+ +A +Y ++ C+++ ++E + ++ Sbjct: 180 TRTATQVNNRTLTAPTEIFLTIALMYFVI---CWVLTATSRRLEKQMARY 226 >gi|170781633|ref|YP_001709965.1| putative glutamate permease [Clavibacter michiganensis subsp. sepedonicus] gi|169156201|emb|CAQ01343.1| putative glutamate permease [Clavibacter michiganensis subsp. sepedonicus] Length = 215 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/144 (34%), Positives = 80/144 (55%), Gaps = 1/144 (0%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 YV + R TPLL+ + I A +++LTL + + +E IRS I S+P G Sbjct: 54 YVELLRNTPLLLVFTFFSVVITSISGALPFMTAAVLALTLYTAPFFAEAIRSGINSVPVG 113 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ +IGLT QT+ +ILPQ + T PL + I++ K+TS+A I E+F + Sbjct: 114 QAEAARSIGLTFSQTLGSVILPQAVRTVIPPLINVVIALTKNTSIAGAYFIYELFNVGRD 173 Query: 181 IVSTTYQPLI-IYCELAFVYLILT 203 + + ++ ++ +AF YLI+T Sbjct: 174 VANANGDAVVWVFVGVAFFYLIIT 197 >gi|325292972|ref|YP_004278836.1| general L-amino acid transport system permease protein AapM [Agrobacterium sp. H13-3] gi|325060825|gb|ADY64516.1| general L-amino acid transport system permease protein AapM [Agrobacterium sp. H13-3] Length = 385 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/196 (28%), Positives = 99/196 (50%), Gaps = 6/196 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ ++VTL ++ +SL G +A+ R + +I ++ ++ + RG PL+ LF Sbjct: 172 LWGGLMVTLILSFFGIAVSLPFGILLALGRRS-NLPVIKMLCVLFIEVIRGIPLITVLFF 230 Query: 77 IFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G FD F+ ++ ++L SAY++E+IR + +IPKGQ++ + ++GL Sbjct: 231 ASIMLPLFLPDGWTFDKFLRALVGVSLFSSAYMAEVIRGGLQAIPKGQYEGADSLGLNYW 290 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ--TAQRIVSTTYQPLII 191 Q R I+LPQ + + + FI + K TS+ S I + ++ T + + P+ Sbjct: 291 QKTRLIVLPQALKLVIPGIVNTFIGLFKDTSLVSIIGMFDLLGIVTLNQSDANWATPVTA 350 Query: 192 YCELAFVYLILTSFCY 207 F I FC+ Sbjct: 351 MTGYIFAGFIFWIFCF 366 >gi|139473300|ref|YP_001128015.1| ABC transporter permease [Streptococcus pyogenes str. Manfredo] gi|134271546|emb|CAM29770.1| ABC transporter permease protein [Streptococcus pyogenes str. Manfredo] Length = 267 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 107/212 (50%), Gaps = 20/212 (9%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W + + D+ P ++ + +TL + L++ A+++I ++ I +V Sbjct: 26 FSW-HAVFDAIPNII-QRLPITLGLTLSGATFGLVLALIFALVKIN-KVKLLYPIQAIFV 82 Query: 63 WIFRGTPLLVQLFVIFYGLP--------------HIGIVFDSFVAIIISLTLNFSAYISE 108 RGTP+LVQL + +YG+P ++ + S AI + N +AY SE Sbjct: 83 SFLRGTPILVQLMLTYYGIPLFLKFLNQKYGFDWNVNAIPASIFAIT-AFAFNEAAYASE 141 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP-LSSEFISILKSTSVAS 167 IR++I+S+ G+ +A+ ++G+T Q R +I+P T A+P L + I + K TS+A Sbjct: 142 TIRAAILSVDTGEIEAAKSLGMTSVQVYRRVIIPNA-TVVAIPTLINGLIGLTKGTSLAF 200 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I E+F AQ + + Y+ Y +A VY Sbjct: 201 NAGIVEMFAQAQILGGSDYRYFERYISVALVY 232 >gi|315612722|ref|ZP_07887633.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] gi|315314832|gb|EFU62873.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] Length = 219 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 105/193 (54%), Gaps = 14/193 (7%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +TL I+ I+ V+S +IG +AV+R + ++ +I Y+ R P L+ +F Sbjct: 16 IFKGFGLTLYISLIAIVLSTLIGTVLAVMR-NGKNPVLRIISSIYIEFVRNVPNLLWIFT 74 Query: 77 IFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF +VF S A I + TL SA ++EIIR + ++ KGQ++A + G T Q Sbjct: 75 IF-------LVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSTQ 127 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQP---LI 190 + +IILPQ I + S+F++++K TS+ S I + E+F +Q ++ ++P Sbjct: 128 ILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFEPEQVFS 187 Query: 191 IYCELAFVYLILT 203 +Y +A +Y I Sbjct: 188 LYILIALIYFIFN 200 >gi|306826917|ref|ZP_07460217.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pyogenes ATCC 10782] gi|304430935|gb|EFM33944.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pyogenes ATCC 10782] Length = 267 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 107/212 (50%), Gaps = 20/212 (9%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W + + D+ P ++ + +TL + L++ A+++I ++ I +V Sbjct: 26 FSW-HAVFDAIPNII-QRLPITLGLTLSGATFGLVLALIFALVKIN-KVKLLYPIQAIFV 82 Query: 63 WIFRGTPLLVQLFVIFYGLP--------------HIGIVFDSFVAIIISLTLNFSAYISE 108 RGTP+LVQL + +YG+P ++ + S AI + N +AY SE Sbjct: 83 SFLRGTPILVQLMLTYYGIPLFLKCLNQKYGFDWNVNAIPASIFAIT-AFAFNEAAYASE 141 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVP-LSSEFISILKSTSVAS 167 IR++I+S+ G+ +A+ ++G+T Q R +I+P T A+P L + I + K TS+A Sbjct: 142 TIRAAILSVDTGEIEAAKSLGMTSVQVYRRVIIPNA-TVVAIPTLINGLIGLTKGTSLAF 200 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I E+F AQ + + Y+ Y +A VY Sbjct: 201 NAGIVEMFAQAQILGGSDYRYFERYISVALVY 232 >gi|325924206|ref|ZP_08185766.1| amino acid ABC transporter membrane protein, PAAT family [Xanthomonas gardneri ATCC 19865] gi|325545337|gb|EGD16631.1| amino acid ABC transporter membrane protein, PAAT family [Xanthomonas gardneri ATCC 19865] Length = 583 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 28/196 (14%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 EWF F + + A + TL + + + +G +A+ R+ S +++ + YVW Sbjct: 65 EWF------FAEPVLAGLGRTLLLTALGTLFGFALGTVLALARVSGS-PLLAGVSWGYVW 117 Query: 64 IFRGTPLL---------------VQLFVIFYGL-----PHIGIVFDSFVAIIISLTLNFS 103 +FR PLL + L V F G+ P ++ F A ++ L+LN + Sbjct: 118 LFRSIPLLVLLLLLNNLGYLYATISLDVPFTGITLFSYPTTALI-SQFAAAVLGLSLNQA 176 Query: 104 AYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKST 163 A+ +EIIR I+S+ +GQ++AS A+GL R + IR I+LPQ + T ++ I++ K T Sbjct: 177 AFSAEIIRGGILSVDQGQFEASAALGLPRVRQIRRIVLPQAMRTILPGAFNDVINLAKGT 236 Query: 164 SVASTITIPEIFQTAQ 179 SV + +PE+F T Q Sbjct: 237 SVVYILALPELFYTIQ 252 >gi|254286188|ref|ZP_04961148.1| amino acid ABC transporter, permease protein [Vibrio cholerae AM-19226] gi|262192391|ref|ZP_06050544.1| ABC-type amino acid transport system permease component [Vibrio cholerae CT 5369-93] gi|150423857|gb|EDN15798.1| amino acid ABC transporter, permease protein [Vibrio cholerae AM-19226] gi|262031744|gb|EEY50329.1| ABC-type amino acid transport system permease component [Vibrio cholerae CT 5369-93] Length = 365 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 8/195 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFV 76 + ++VTL IA + + SL IG +A+ R SD II + Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIIASLPIGVALALGRR--SDMPIIRSLCTVYIEVWRGVPLITVLFM 212 Query: 77 IFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G D + +I + + +AY++E+IR + +IPKGQ++A+ A+GL+ Sbjct: 213 ASVMLPLFLSQGSEIDKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYW 272 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + + IILPQ + + + + FI + K TS+ I + ++ Q +T L Sbjct: 273 KKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQS-ANTDPNWLGFAT 331 Query: 194 E-LAFVYLILTSFCY 207 E FV L+ FC+ Sbjct: 332 ESYVFVALVFWIFCF 346 >gi|254239634|ref|ZP_04932956.1| hypothetical protein PA2G_00251 [Pseudomonas aeruginosa 2192] gi|126193012|gb|EAZ57075.1| hypothetical protein PA2G_00251 [Pseudomonas aeruginosa 2192] Length = 221 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 91/163 (55%), Gaps = 2/163 (1%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 ++ P++L A +VTL + +S + ++I +A R+ S+ + ++ I R TP Sbjct: 13 NALPEML-AGSLVTLQVTALSMLFGILIALLLAFARLG-SNRPLRAAAGAWISIARNTPA 70 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L Q++++++GL G+ S+ A++ +T N + Y++E R + ++P+ Q A+ ++G+ Sbjct: 71 LFQIYILYFGLGSFGLHVSSWFALLAGVTFNNAGYLAETFRGGLQAVPETQLRAARSLGM 130 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 + Q R +++PQ + PL+++ + + TS+ + + + Sbjct: 131 SAPQAYRLVVIPQLLRVVFYPLTNQLVWAMLMTSLGVVVGLTD 173 >gi|77465461|ref|YP_354964.1| ABC polar amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|126463863|ref|YP_001044976.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17029] gi|77389879|gb|ABA81063.1| ABC polar amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|126105674|gb|ABN78204.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17029] Length = 226 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 63/113 (55%) Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R P LV + ++++GLP +G+ + +I+ L +A+ EI + + S+PKGQW+A Sbjct: 72 RALPPLVLILIMYFGLPGLGLRMPGPLVLILVLGTVLAAFAEEIFWAGLTSVPKGQWEAG 131 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 A GL QT+ I LPQ + PL + ++I K T++ S I + EI A Sbjct: 132 RATGLGFTQTLVQIALPQAARLALPPLVNRVLAISKMTALGSVIGVSEILSVA 184 >gi|332285565|ref|YP_004417476.1| polar amino acid ABC transporter, inner membrane subunit [Pusillimonas sp. T7-7] gi|330429518|gb|AEC20852.1| polar amino acid ABC transporter, inner membrane subunit [Pusillimonas sp. T7-7] Length = 507 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 111/199 (55%), Gaps = 11/199 (5%) Query: 31 SFVISLIIGFFIAVIRIFFSDTIISLI--MHFYVWIFRGTPLLVQLFVIFYG---LPHIG 85 +++I+ +GF +A+ + I SL Y+W FR PLLV L ++ P Sbjct: 31 AWLIAGAVGFVLALAK---QSRIASLNWPARVYIWFFRSLPLLVLLVFVYNLPQVFPASS 87 Query: 86 IVFDS-FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQT 144 +V S F A +I+L L+ +AY++EI R I+S+P+GQ++A A+G+ R I++PQ Sbjct: 88 VVLSSPFYAGLIALVLSETAYMAEIHRGGILSVPRGQYEAGKALGIRYSGIQRLIVIPQA 147 Query: 145 ITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTS 204 I + LS++F++I+K TS+ S I++ EI QR+ + + +AF Y+++ + Sbjct: 148 IRIALPTLSNQFVTIVKLTSLVSVISLTEILLVGQRLYTQNFLIFETMLAVAFYYVLVVT 207 Query: 205 FCYIIQIKIES--SVTQHT 221 + I++E+ VTQ Sbjct: 208 LFDKVLIRLEAFLDVTQRK 226 >gi|309791171|ref|ZP_07685703.1| polar amino acid ABC transporter, inner membrane subunit [Oscillochloris trichoides DG6] gi|308226733|gb|EFO80429.1| polar amino acid ABC transporter, inner membrane subunit [Oscillochloris trichoides DG6] Length = 398 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 72/111 (64%), Gaps = 2/111 (1%) Query: 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSA 149 +F A+I+ L + + YI EI+RS I ++ KGQ +A+ A+GLT QT+R +I PQ + Sbjct: 266 NFAALIMGLVIYTAVYIGEIVRSGIQAVNKGQREAARALGLTPGQTLRLVIFPQALRIMI 325 Query: 150 VPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCELAFV 198 P++S+++++ K++S+A I P++F A ++ T Q P+++ L+++ Sbjct: 326 PPMTSQYLNLTKNSSLAVAIGFPDLFSVAGTTLNQTGQTVPVMLIVMLSYL 376 >gi|306829072|ref|ZP_07462262.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] gi|304428158|gb|EFM31248.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] Length = 219 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/186 (32%), Positives = 103/186 (55%), Gaps = 11/186 (5%) Query: 23 VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 +TL I+ I+ V+S +IG +AV+R + ++ +I Y+ R P L+ +F IF Sbjct: 22 LTLYISLIAIVLSTLIGTVLAVMR-NGKNPVLRIISSIYIEFVRNVPNLLWIFTIF---- 76 Query: 83 HIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHII 140 +VF S A I + TL SA ++EIIR + ++ KGQ++A + G T Q + +II Sbjct: 77 ---LVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYII 133 Query: 141 LPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 LPQ I + S+F++++K TS+ S I + E+F +Q ++ ++P ++ + Sbjct: 134 LPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFEPEQVFSLYILIA 193 Query: 200 LILTSF 205 LI SF Sbjct: 194 LIYFSF 199 >gi|222086404|ref|YP_002544938.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221723852|gb|ACM27008.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 223 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 109/204 (53%), Gaps = 3/204 (1%) Query: 1 MKYEW-FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 M+Y + F + + +P +L ++VT+ + + V+ + +G A R + I+ Sbjct: 1 MRYHFDFGWLAEYYP-VLIKGVLVTIELTLVGAVVGIALGIACAWARAL-GPRWLQPIVA 58 Query: 60 FYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 YV + R TP L+QLF IF+GLP IGI A +++ +N AY EIIR+ I + P+ Sbjct: 59 TYVELIRNTPFLIQLFFIFFGLPGIGIHMSEITAANLAMIVNLGAYSCEIIRAGIQATPR 118 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++A ++ +T +T RH+IL ++ LSS+ + ++ ++V S I ++ A Sbjct: 119 GQFEAGASLAMTPFETFRHVILVPSLQRIWPALSSQVVIVMLGSAVVSQIAAEDLTFAAN 178 Query: 180 RIVSTTYQPLIIYCELAFVYLILT 203 I S +++ Y +YL+L Sbjct: 179 FIQSRSFRAFEAYFVSTAIYLLLA 202 >gi|83592338|ref|YP_426090.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC 11170] gi|83575252|gb|ABC21803.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170] Length = 365 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 104/195 (53%), Gaps = 9/195 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVI 77 + +++TL +A + V +L +G +A+ R S ++ + ++ ++RG PL+ LF+ Sbjct: 155 WGGLMLTLVLAYVGIVAALPLGMVLALGR-RSSMPVVRISCTTFIELWRGVPLISVLFMA 213 Query: 78 FYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 LP G+ FD + +I +TL SAY++E+IR + +IP+GQ++A+ A+GL + Sbjct: 214 SVMLPLFLPTGVTFDKLLRALIGITLFQSAYMAEVIRGGLQAIPRGQFEAASALGLGFWR 273 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCE 194 + IILPQ + + + FI++ K T++ I + +I T Q S P + Sbjct: 274 STGLIILPQALKLVIPGVVNTFIALFKDTTLVLIIGLLDILGTVQ---SAIVDP--AWSR 328 Query: 195 LAFVYLILTSFCYII 209 +A I FC+ I Sbjct: 329 VAVEGYIFAGFCFWI 343 >gi|168492768|ref|ZP_02716911.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC3059-06] gi|183576840|gb|EDT97368.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC3059-06] Length = 219 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 104/192 (54%), Gaps = 11/192 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 ++ +TL I+ I+ ++S IIG +AV+R + I+ +I Y+ R P L+ +F Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMR-NGKNPILRIISSIYIEFVRNVPNLLWIFT 74 Query: 77 IFYGLPHIGIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 IF +VF S A I + TL SA ++EIIR + ++ KGQ++A + G T Q Sbjct: 75 IF-------LVFKIKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQ 127 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVA-STITIPEIFQTAQRIVSTTYQPLIIYC 193 + +IILPQ I + S+F+ ++K TS+ S I + E+F +Q ++ ++P ++ Sbjct: 128 ILYYIILPQAIRKMLPAIISQFVPVIKDTSLLYSVIALQELFGASQILMGRYFEPEQVFS 187 Query: 194 ELAFVYLILTSF 205 + LI SF Sbjct: 188 LYILIALIYFSF 199 >gi|84515669|ref|ZP_01003030.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Loktanella vestfoldensis SKA53] gi|84510111|gb|EAQ06567.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Loktanella vestfoldensis SKA53] Length = 497 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 105/197 (53%), Gaps = 6/197 (3%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF-- 75 + ++ + I V+SL +G +A+ R S +I + ++ + RG PL+V LF Sbjct: 288 FGGFMLAIIIGTSGIVLSLPLGIALALGRQS-SMPLIKWVCVSFIEVIRGVPLIVWLFTA 346 Query: 76 --VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 ++ Y LP G FD + +II +TL SAY++E++R + ++PKGQ++A+ ++GL Sbjct: 347 STLLNYFLPP-GTTFDLLLRVIIMVTLFASAYLAEVVRGGLAALPKGQYEAADSLGLDYW 405 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 +++R IILPQ + S + + FI + K T++ I + + I +T+ I + Sbjct: 406 KSMRLIILPQALKISIPGIVNTFIGLFKDTTLVVFIGLRDPLGLTNAIRATSEWNGIYWE 465 Query: 194 ELAFVYLILTSFCYIIQ 210 FV + FC+ + Sbjct: 466 LYIFVGGLFFMFCFFMS 482 >gi|293375605|ref|ZP_06621879.1| ABC transporter, permease protein [Turicibacter sanguinis PC909] gi|292645822|gb|EFF63858.1| ABC transporter, permease protein [Turicibacter sanguinis PC909] Length = 225 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 99/172 (57%), Gaps = 6/172 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAV-IRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L + VTL I+ IS +IS+++G + + +R+ ++ LI Y+ R P LV LF Sbjct: 18 LLQGLGVTLEISLISVMISVVLGLVMGMFMRV--KTKVVRLICRLYLNTVRIVPQLVLLF 75 Query: 76 VIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 + ++GL GI VA I+ + A + +++R ++ SIPK Q++ + AIGL ++Q Sbjct: 76 LAYFGLSKSFGINLSGEVASILVFSFWGIAEMGDLVRGALDSIPKHQYETALAIGLNQRQ 135 Query: 135 TIRHIILPQTITTSAVPLSSEFIS-ILKSTSVASTITIPEIFQTAQRIVSTT 185 ++II+PQTI +P + ++ I+K+TS+ I + E+ + Q+I+ + Sbjct: 136 IYQYIIIPQTI-RRLLPQTINLVTRIIKTTSLIVLIGVVEVVKVGQQIIEAS 186 >gi|227873563|ref|ZP_03991805.1| ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] gi|227840587|gb|EEJ50975.1| ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] Length = 245 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 110/198 (55%), Gaps = 10/198 (5%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 ++F +LL+ + VTL ++ I+ ++SL +G + + D I I Y+ R P Sbjct: 33 NNFQRLLWG-LFVTLRVSLIAVLLSLPLGILFGLF-MRRKDPISRGISQLYLAFIRIMPP 90 Query: 71 LVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 LV LF++++G I G + I+ TL +A + +++R++I SIPK Q ++ ++G Sbjct: 91 LVLLFLVYFGTARIAGFHLSGEASGILVFTLWGTAEMGDLVRAAIGSIPKHQKESGRSLG 150 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFIS-ILKSTSVASTITIPEIFQTAQRIVSTTY-- 186 L+ Q R+II+PQT+ +PLS I+ ++K+TS+ I + E+ +T Q+I+ Sbjct: 151 LSSWQIYRYIIIPQTV-RRLIPLSINLITRMIKTTSLIVLIGVVEVLKTGQQIIDANRFQ 209 Query: 187 ---QPLIIYCELAFVYLI 201 ++IY + F+Y I Sbjct: 210 YPKASIVIYAVIFFLYFI 227 >gi|221369462|ref|YP_002520558.1| Polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] gi|332561118|ref|ZP_08415436.1| Polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides WS8N] gi|221162514|gb|ACM03485.1| Polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] gi|332274916|gb|EGJ20232.1| Polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides WS8N] Length = 226 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 63/114 (55%) Query: 66 RGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDAS 125 R P LV + ++++GLP +G+ + +I+ L +A+ EI + + S+PKGQW+A Sbjct: 72 RALPPLVLILIMYFGLPGLGLRMPGPLVLILVLGTVLAAFAEEIFWAGLTSVPKGQWEAG 131 Query: 126 YAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 A GL QT+ I LPQ + PL + ++I K T++ S I + EI A Sbjct: 132 RATGLGFTQTLVRIALPQAARLALPPLVNRVLAISKMTALGSVIGVSEILSVAS 185 >gi|17549155|ref|NP_522495.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum GMI1000] gi|17431406|emb|CAD18085.1| probable amino acid transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 233 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 10/198 (5%) Query: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 F ++L + +TL IA S+V+ + + F + +R+ + + + YV P L Sbjct: 14 EFSRMLIEGVWMTLVIAGCSWVLGMALAFVLLALRMV-PNPLAERFVGAYVSYHCNVPTL 72 Query: 72 VQLFVIFYG---------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 VQL ++G L +G V I++L L +AY SE +RS + +IP GQ Sbjct: 73 VQLMFWYFGISTLLPLPALDWLGEHHSEVVFAIVALGLCQAAYFSEDLRSGLRAIPPGQE 132 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ A+G T T+R+++LPQ + + L + +S+ K++S+A I + E+ + I Sbjct: 133 EAARALGNTFIGTLRYVLLPQAVRNALPALINHSVSLFKNSSLAMAIGVTEMTHAVKEIE 192 Query: 183 STTYQPLIIYCELAFVYL 200 + +++ Y +YL Sbjct: 193 NASFRAFESYLLATLMYL 210 >gi|330980427|gb|EGH78530.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 329 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 24/211 (11%) Query: 35 SLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY----------GLPHI 84 S+I+G +A+ R+ S + +L Y+W FR P L+ L +++ G+P Sbjct: 98 SIILGTALALARLSGSPLLAALAWG-YIWFFRSMPALLVLIILYNFAYLYDHIVLGVPFT 156 Query: 85 GIVF---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 +VF F ++ L+L SAY +EIIR +I + GQ +A+ A+GL + Sbjct: 157 QLVFAEWSTVDVLSQFTVAVLGLSLMQSAYTAEIIRGGLIGVDAGQHEAAAALGLPVSRR 216 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYC 193 I IILPQ + + +E I ++K TS+ + +PE+F T Q I + T PL+I Sbjct: 217 IFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVA 276 Query: 194 ELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 + YLI+T+ Q +E + + V Sbjct: 277 TV--WYLIITTVLTSAQYYVERHFARGSARV 305 >gi|262404014|ref|ZP_06080569.1| amino acid ABC transporter permease protein [Vibrio sp. RC586] gi|262349046|gb|EEY98184.1| amino acid ABC transporter permease protein [Vibrio sp. RC586] Length = 279 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 8/195 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFV 76 + ++VTL IA + ++SL IG +A+ R SD II + Y+ ++RG PL+ LF+ Sbjct: 69 WGGLLVTLIIALVGIIVSLPIGVALALGR--RSDMPIIRSLCTVYIEVWRGVPLITVLFM 126 Query: 77 IFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G + + +I + + +AY++E+IR + +IPKGQ++A+ A+GL+ Sbjct: 127 ASVMLPLFLSEGSEINKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYW 186 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + + IILPQ + + + + FI + K TS+ I + ++ Q +T L Sbjct: 187 KKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQS-ANTDPNWLGFAT 245 Query: 194 E-LAFVYLILTSFCY 207 E FV L+ FC+ Sbjct: 246 ESYVFVALVFWVFCF 260 >gi|227529141|ref|ZP_03959190.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] gi|227350985|gb|EEJ41276.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] Length = 227 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 98/185 (52%), Gaps = 10/185 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP- 82 T+ + SF+ + ++G + + + + + I Y+ + RGTP L+ L + +YGLP Sbjct: 22 TIELLIFSFIFATLLGLLLTWVGLR-KNRLAQGIATVYLNLVRGTPPLLMLLLAYYGLPV 80 Query: 83 ---HIGIVFDSFVAI---IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 IGI D + + I+ L+L +S Y++E RS+ +S+ GQ +A+ ++G+ + T Sbjct: 81 LLKAIGINIDHWTRLMFGILGLSLGWSGYLAEAFRSAYLSVDTGQIEAARSVGMKDQTTF 140 Query: 137 RHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT--YQPLIIYCE 194 R IILPQ + + + + ++K+TS+ I + +++ A + + T L I+ Sbjct: 141 RQIILPQAAILALPNIENLVVGLVKATSLVYVIGLYDMYNQASNLSNQTAGLHQLQIFIL 200 Query: 195 LAFVY 199 LA Y Sbjct: 201 LALSY 205 >gi|254500256|ref|ZP_05112407.1| ABC transporter, permease protein, putative [Labrenzia alexandrii DFL-11] gi|222436327|gb|EEE43006.1| ABC transporter, permease protein, putative [Labrenzia alexandrii DFL-11] Length = 241 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L A T+ ++ I+F+ +IG + IR+ + + + Y W+F+ PLL+ LF+ Sbjct: 25 LLEATQFTIYLSLIAFLGGGLIGVCVTAIRVS-PMSWLRTVFAAYTWLFQSVPLLMLLFL 83 Query: 77 IFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQT 135 + G+P + I D + A ++LTL SAY+SE+ R +I S+P GQ + A+GL Q Sbjct: 84 LGLGMPRLFAIQVDPWFAAGLALTLYTSAYLSEVWRGAITSVPLGQHEGGRALGLAFAQI 143 Query: 136 IRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST---TYQPLIIY 192 + IILPQ + P + I+K TS+A I ++ +R ++ QP +IY Sbjct: 144 MILIILPQAFRLAIAPTVGFMVQIIKGTSLAYIIGFHDLMAIGKRWANSPVPGTQPFVIY 203 Query: 193 CELAFVYLILTSFCY 207 +A +Y S CY Sbjct: 204 PMMAMIYF---SLCY 215 >gi|229521466|ref|ZP_04410885.1| amino acid ABC transporter permease protein [Vibrio cholerae TM 11079-80] gi|297578945|ref|ZP_06940873.1| amino acid ABC transporter [Vibrio cholerae RC385] gi|229341564|gb|EEO06567.1| amino acid ABC transporter permease protein [Vibrio cholerae TM 11079-80] gi|297536539|gb|EFH75372.1| amino acid ABC transporter [Vibrio cholerae RC385] Length = 365 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 8/195 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFV 76 + ++VTL IA + + SL IG +A+ R SD II + Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIIASLPIGVALALGRR--SDMPIIRSLCTVYIEVWRGVPLITVLFM 212 Query: 77 IFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G D + +I + + +AY++E+IR + +IPKGQ++A+ A+GL+ Sbjct: 213 ASVMLPLFLSQGSEIDKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYW 272 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + + IILPQ + + + + FI + K TS+ I + ++ Q +T L Sbjct: 273 KKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQS-ANTDPNWLGFAT 331 Query: 194 E-LAFVYLILTSFCY 207 E FV L+ FC+ Sbjct: 332 ESYVFVALVFWIFCF 346 >gi|307730184|ref|YP_003907408.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307584719|gb|ADN58117.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 229 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/220 (23%), Positives = 108/220 (49%), Gaps = 16/220 (7%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 +++ F +L A + T+ ++ +S ++++G A ++ + + +L Y + R Sbjct: 1 MVLYGFGPVLLAGTIQTVELSVLSLATAVLLGLAGAAAKLSLNRPLRALATG-YTTLIRS 59 Query: 68 TPLLVQLFVIFY-------------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSI 114 P LV + ++FY GLP I D FVA +++L + AY +E R + Sbjct: 60 VPDLVLMLLLFYSIQIAVNNLTDALGLPQFDI--DPFVAGVLTLGFIYGAYFTETFRGAF 117 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 +++P+GQ +A A G++ + I+ PQ + + + + + ++K+T++ S I + ++ Sbjct: 118 LAVPRGQLEAGSAYGMSGARVFARILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADV 177 Query: 175 FQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE 214 + AQ +T+ A +YL LT+ + I +E Sbjct: 178 VKAAQDAGKSTFNMFFFILIAALIYLALTTVSNLALIWLE 217 >gi|86360503|ref|YP_472391.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86284605|gb|ABC93664.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 211 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 86/161 (53%), Gaps = 9/161 (5%) Query: 36 LIIGFFIAVIRIFFSD---TIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF--DS 90 +I GF +A+I F +IS + YV R P+++QLFV FYGLP + +F D Sbjct: 1 MIAGFVLALITTTFRVRRIAVISQLADLYVSYARSVPVVLQLFVAFYGLPVLVGLFGIDD 60 Query: 91 FV----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTIT 146 FV A I+ L+L Y+SE++R + +++ +GQ DA+ ++G T +Q + ++ PQ + Sbjct: 61 FVSPTIAAILGLSLYHGGYLSEVMRPAFLAVERGQHDAADSLGYTFRQKLVRVVAPQAVH 120 Query: 147 TSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ 187 + + I ++ + ++ I ++ TA ++ Y Sbjct: 121 IALPGYGNSIIYLIHNVALVMYIGAADVMATAHLVMERDYN 161 >gi|254225348|ref|ZP_04918960.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51] gi|125622189|gb|EAZ50511.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51] Length = 365 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 8/195 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFV 76 + ++VTL IA + + SL IG +A+ R SD II + Y+ ++RG PL+ LF+ Sbjct: 155 WGGLLVTLIIALVGIIASLPIGVALALGRR--SDMPIIRSLCTVYIEVWRGVPLITVLFM 212 Query: 77 IFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G D + +I + + +AY++E+IR + +IPKGQ++A+ A+GL+ Sbjct: 213 ASVMLPLFLSQGSEIDKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYW 272 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + + IILPQ + + + + FI + K TS+ I + ++ Q +T L Sbjct: 273 KKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQS-ANTDPNWLGFAT 331 Query: 194 E-LAFVYLILTSFCY 207 E FV L+ FC+ Sbjct: 332 ESYVFVALVFWIFCF 346 >gi|254469494|ref|ZP_05082899.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062] gi|211961329|gb|EEA96524.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062] Length = 372 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/151 (35%), Positives = 89/151 (58%), Gaps = 6/151 (3%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV-- 76 +++T+ I SL IG +A+ R + SL + F +I RG PL+ LFV Sbjct: 164 GGLLLTMIIGVSGISFSLPIGIVLALSRSSNLPIVKSLAVIFIEFI-RGVPLITLLFVAH 222 Query: 77 --IFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 + Y LP G+ FD + ++I +TL SAY++E+IR + ++PKGQ++A+ A+GL+ Q Sbjct: 223 VLLNYFLPK-GVNFDIVLRVVIMVTLFASAYMAEVIRGGLAALPKGQYEAADALGLSYWQ 281 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSV 165 ++R IILPQ + S + + FI + K T++ Sbjct: 282 SMRLIILPQALKISIPGIVNTFIGLFKDTTL 312 >gi|311898731|dbj|BAJ31139.1| putative glutamate ABC transporter permease protein [Kitasatospora setae KM-6054] Length = 216 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 83/141 (58%), Gaps = 2/141 (1%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 +V +FR TPL + FV+ + LP + + SF A + +L++ ++I E++R+ I ++P G Sbjct: 56 WVTVFRNTPLTLLFFVVTFMLPRLELHISSFTAAVAALSVYTGSFICEVLRAGINTVPLG 115 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQR 180 Q +A+ ++G+ QT+ ++LPQ PL S FI++ ++++VA + E+F + Q+ Sbjct: 116 QAEAARSLGMGFGQTLFLVVLPQAGRAVIAPLGSVFIALPRNSAVAGAFNVFELF-SVQK 174 Query: 181 IVSTTYQPLII-YCELAFVYL 200 + P+ + + LA YL Sbjct: 175 TWTEDSAPIFVSFFWLALAYL 195 >gi|153822068|ref|ZP_01974735.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33] gi|126520401|gb|EAZ77624.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33] Length = 279 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 8/195 (4%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLFV 76 + ++VTL IA + + SL IG +A+ R SD II + Y+ ++RG PL+ LF+ Sbjct: 69 WGGLLVTLIIALVGIIASLPIGVALALGRR--SDMPIIRSLCTVYIEVWRGVPLITVLFM 126 Query: 77 IFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP G D + +I + + +AY++E+IR + +IPKGQ++A+ A+GL+ Sbjct: 127 ASVMLPLFLSQGSEIDKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYW 186 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + + IILPQ + + + + FI + K TS+ I + ++ Q +T L Sbjct: 187 KKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQS-ANTDPNWLGFAT 245 Query: 194 E-LAFVYLILTSFCY 207 E FV L+ FC+ Sbjct: 246 ESYVFVALVFWIFCF 260 >gi|110633468|ref|YP_673676.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110284452|gb|ABG62511.1| general L-amino acid ABC transporter membrane protein [Chelativorans sp. BNC1] Length = 498 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 99/199 (49%), Gaps = 6/199 (3%) Query: 14 PQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ 73 P + +++TL +A SL +G +A+ R + L ++ +RG PL+ Sbjct: 282 PTSQWGGLMLTLVVALTGIAASLPLGILLALGRRSHLPAV-RLFSIIFIEFWRGVPLITV 340 Query: 74 LFVIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 LF+ + +P + G+ F+ + +I + + +AY++E+IR + +IPKGQ++ + A+GL Sbjct: 341 LFMSAFMIPLLLPEGVTFNQLLRALIGVAIFSAAYMAEVIRGGLQAIPKGQYEGAEALGL 400 Query: 131 TRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY--QP 188 Q +R +I+PQ I + + FI + K TS+ I + ++ T +R S P Sbjct: 401 GYWQMMRLVIMPQAIKLVIPGIVNTFIGLFKDTSLVYIIGLADLLGTVRRGFSDPNWITP 460 Query: 189 LIIYCELAFVYLILTSFCY 207 L F + FC+ Sbjct: 461 TTAATGLVFAGFVYWLFCF 479 >gi|300722506|ref|YP_003711796.1| arginine ABC transporter membrane protein [Xenorhabdus nematophila ATCC 19061] gi|297629013|emb|CBJ89598.1| arginine transport protein (ABC superfamily, membrane) [Xenorhabdus nematophila ATCC 19061] Length = 238 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/235 (24%), Positives = 112/235 (47%), Gaps = 25/235 (10%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL 74 Q L A VT+ +A S V+ L++ A I + + +V + RG P ++ + Sbjct: 5 QSLIGAAGVTVGLAISSLVVGLVLAMLFAAWESARWKPI-AFLGSCWVTLIRGLPEILVV 63 Query: 75 FVIFYGLPHIGIV----------------------FD--SFVAIIISLTLNFSAYISEII 110 I++G I FD F+ +I+L+L +SAY S+ + Sbjct: 64 LFIYFGSSQFLITLSEGFEVNLIVWQFKVQMDINSFDVSPFLCGVIALSLLYSAYASQTL 123 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 R ++ ++P GQW+A A+GL++ + +++PQ + L ++++ +LK T++ S I+ Sbjct: 124 RGALKAVPIGQWEAGQALGLSQSRIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLIS 183 Query: 171 IPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSVD 225 + ++ + I + T +P Y +A +YL +T I ++E T+ S+ Sbjct: 184 VNDLMLQTKSIATRTQEPFTWYVTVAAIYLAITLISQFILRRLEMRATRFERSIS 238 >gi|284009202|emb|CBA76273.1| amino acid ABC transporter, permease protein [Arsenophonus nasoniae] Length = 245 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 108/207 (52%), Gaps = 31/207 (14%) Query: 7 NLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR----IFFSDTIISLIMHFYV 62 L+ + ++ +++T+ I+ + V S ++GF + R +F IS Y+ Sbjct: 9 QLLAPEYFDWIWQGLLITIGISFCAIVFSSLLGFVVVAARDSHIVFLRWLAIS-----YI 63 Query: 63 WIFRGTPLLVQLFVIFYGL--------------PH----IGIVFD----SFVAIIISLTL 100 +FR TPLL+QLF ++ + PH +G+ F+A +I L L Sbjct: 64 SLFRNTPLLIQLFFWYFAVGGILPESVMQWLNTPHQLTILGLQLAWPSFEFLAGVIGLIL 123 Query: 101 NFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISIL 160 + +I+E +R+ I + +GQ A+ A+GL+ Q +R+++LPQ + + PL ++++I+ Sbjct: 124 YSTPFIAEELRAGIYGVKQGQNFAALALGLSDWQAMRYVVLPQALKIAMPPLLGQYMNIV 183 Query: 161 KSTSVASTITIPEIFQTAQRIVSTTYQ 187 K++S+ I + E+ +++I S + Q Sbjct: 184 KNSSLTMAIGVAELSYVSRQIESQSLQ 210 >gi|242280379|ref|YP_002992508.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242123273|gb|ACS80969.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 459 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 3/146 (2%) Query: 62 VWIFRGTPLLVQLFVIFYGLPHIGI--VFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 W+ G P + F + G G + F A+++ LT+ SA+ +EIIRS I ++ K Sbjct: 298 AWLLGGQPFTLD-FPVLKGFNFKGGTGLTPEFTALVVGLTVYVSAFNAEIIRSGIEAVSK 356 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ +A+ A+ + +Q +R +ILPQ + P++SE+++I K++S+A I PE Sbjct: 357 GQREAARALAMNERQVMRIVILPQAMRIIVPPMTSEYLAIAKNSSLAVAIGYPEFVSVGG 416 Query: 180 RIVSTTYQPLIIYCELAFVYLILTSF 205 I++ + Q + I VYL ++ F Sbjct: 417 TILNQSGQAVEIVGIWMGVYLCISLF 442 >gi|87302593|ref|ZP_01085410.1| ABC-type permease for basic amino acids and glutamine [Synechococcus sp. WH 5701] gi|87282937|gb|EAQ74894.1| ABC-type permease for basic amino acids and glutamine [Synechococcus sp. WH 5701] Length = 329 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/229 (24%), Positives = 107/229 (46%), Gaps = 45/229 (19%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL-- 74 L +V +L + + V + ++G + + F + ++ + YV + R PLL+QL Sbjct: 81 LLVGLVNSLRVILVGLVGATLLGTAMGMAS-FSGNGLLRRLARVYVEVIRNIPLLLQLLF 139 Query: 75 --FVIFYGLPHI-------GIVFDS---------------------------------FV 92 FV+F LP+ GIV F Sbjct: 140 WYFVVFLALPNGTAAFQLPGIVLSKSGLYLAWFAQGFSWQGPELVNGVWRAPLRLSVEFT 199 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 A++ L A+++E++R I S+PKGQW+A+ ++GL ++R ++LPQ + L Sbjct: 200 ALLTGLITYTGAFVAEVVRGGIASVPKGQWEAATSLGLHWSASMRSVVLPQALRVIVPGL 259 Query: 153 SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLI 201 +S++IS+ K++S+A + +++ ++ ++ T + L ++ L YLI Sbjct: 260 NSQYISLAKNSSLAVAVGYVDLYSVSETTLNQTGRALEVFLLLLGSYLI 308 >gi|332163538|ref|YP_004300115.1| putative amino acid transport system permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318608044|emb|CBY29542.1| glutamate transport membrane-spanning protein [Yersinia enterocolitica subsp. palearctica Y11] gi|325667768|gb|ADZ44412.1| putative amino acid transport system permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 251 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 104/201 (51%), Gaps = 3/201 (1%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 W L+ +FP +TL I+ ++ V S I+G + V + S + + ++ + Sbjct: 9 NWTYLLWGTFPDGPLGGAALTLLISLLAGVASAILGTALGV-ALAMSRGVWAAVLAAVLG 67 Query: 64 IFRGTPLLVQLFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 FR P+++ +F ++ LP + G+ ++ +L L SAY++ +++ I++I GQW Sbjct: 68 FFRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIVAIGAGQW 127 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI-FQTAQRI 181 A ++G R Q + ++LPQ + +++IS++K TS+A + + E+ F Q Sbjct: 128 QAGLSLGFNRWQVLWFVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQVN 187 Query: 182 VSTTYQPLIIYCELAFVYLIL 202 + P+ ++ +A VY +L Sbjct: 188 NRSMVYPMEVFLFVALVYFVL 208 >gi|300715836|ref|YP_003740639.1| glutamate/aspartate transport system permease [Erwinia billingiae Eb661] gi|299061672|emb|CAX58788.1| Glutamate/aspartate transport system permease [Erwinia billingiae Eb661] Length = 225 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 106/188 (56%), Gaps = 11/188 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 +++W + I+ + P L+ +V+TL I + + ++ G +AV+R+ S +S Y Sbjct: 3 EFDW-STIVPNLPYLM-NGMVITLKITVTAIIFGIVWGTLLAVMRLS-SFKPVSWFARLY 59 Query: 62 VWIFRGTPLLVQLFVIFYGLPH-----IGIVFDS---FVAIIISLTLNFSAYISEIIRSS 113 V +FR PL++ L + +P +G+ + ++ +++ +L +AY SEIIR+ Sbjct: 60 VNLFRSVPLVMVLLWFYLVVPSFLQNVLGLSPKTDIRLISAMVAFSLFEAAYYSEIIRAG 119 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I+SI +GQ A+ A+G+TR Q+++ IILPQ L ++ I + + TS+ +++ + Sbjct: 120 IVSIARGQGSAALALGMTRWQSMQLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLAD 179 Query: 174 IFQTAQRI 181 F+TA I Sbjct: 180 FFRTADTI 187 >gi|262282450|ref|ZP_06060218.1| amino acid permease [Streptococcus sp. 2_1_36FAA] gi|262261741|gb|EEY80439.1| amino acid permease [Streptococcus sp. 2_1_36FAA] Length = 225 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 102/170 (60%), Gaps = 8/170 (4%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFY 79 + VT+ I+ IS ++S+I+G F+ +I S I+ L+ FY+ R P LV LF++++ Sbjct: 21 GLGVTIGISVISVLLSMILGTFLGIIMTSRSK-IVRLLTRFYLEFIRIMPQLVLLFIVYF 79 Query: 80 GLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTI 136 GL +I I +S + II TL +A + +++R +I S+PK Q+++ A+GLT+ Q Sbjct: 80 GLARNFNINISGES--SAIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLTKFQLY 137 Query: 137 RHIILPQTITTSAVPLSSEFIS-ILKSTSVASTITIPEIFQTAQRIVSTT 185 ++I+PQ + +P + I+ ++K+TS+ I + E+ + Q+I+ + Sbjct: 138 YYVIIPQVL-RRLLPQAINLITRMIKTTSLVVLIGVVEVTKVGQQIIDSN 186 >gi|255263034|ref|ZP_05342376.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Thalassiobium sp. R2A62] gi|255105369|gb|EET48043.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Thalassiobium sp. R2A62] Length = 293 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/217 (26%), Positives = 108/217 (49%), Gaps = 46/217 (21%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRI-------FFSDTII 54 + EWF P LL + T+ I+ + +++LIIG + V R + T + Sbjct: 54 RQEWF-------PNLLLQGLFATIRISIYASILALIIGTILGVARCSENLTTRLLARTYL 106 Query: 55 SLI-----------------------MHFYVW---IFRGTPLLVQLFVIFYGLPHIGIVF 88 L+ ++ W I RG ++ F+G F Sbjct: 107 ELLRNIPPVVIIFIFFFFLSQQLIDAINLNSWSRGIARGDN--AHIWEFFFGEMR---RF 161 Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 S ++ +I L + +A++ EI+R+ I S+PKGQ +A+ AIG++ Q +R+II+PQ + Sbjct: 162 PSLISGVIVLAMFEAAFVGEIVRAGIQSVPKGQREAARAIGMSSFQEMRYIIMPQAMRKV 221 Query: 149 AVPLSSEFISILKSTSVASTITIPEI-FQTAQRIVST 184 P++++FIS++K +S+ S I++ E+ ++T + + ST Sbjct: 222 VPPMANQFISLIKDSSIISLISVQELTYKTVELVAST 258 >gi|149189499|ref|ZP_01867783.1| probable glutamine transport system permease protein [Vibrio shilonii AK1] gi|148836656|gb|EDL53609.1| probable glutamine transport system permease protein [Vibrio shilonii AK1] Length = 223 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/157 (28%), Positives = 90/157 (57%), Gaps = 1/157 (0%) Query: 65 FRGTPLLVQLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWD 123 + +P+LVQLF+I++GLP + + + +A I+LT N +A++S II +++ ++ KGQ + Sbjct: 61 LKNSPVLVQLFLIYFGLPIFLSMDMSAELAATITLTGNTAAFVSVIIVTAMAAVDKGQIE 120 Query: 124 ASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVS 183 A+ + G++ ++ II PQ + + PL ++ L+ TS+ S I + +I + + Sbjct: 121 AARSFGISEMVILKKIITPQALLVAIAPLVGLAVNQLQVTSLVSVIGVMDITKVGAILNQ 180 Query: 184 TTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 T+QP I++ + Y ++ + K+E + +H Sbjct: 181 RTWQPFIVWPVIGLTYFAMSMAISKLGRKLELYLRKH 217 >gi|261379485|ref|ZP_05984058.1| amino acid ABC transporter, permease protein [Neisseria subflava NJ9703] gi|284797945|gb|EFC53292.1| amino acid ABC transporter, permease protein [Neisseria subflava NJ9703] Length = 222 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 95/176 (53%), Gaps = 6/176 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIG-FFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF 75 L +++T I+ +S S ++G F V+R + +I I FY+ R P+LV LF Sbjct: 15 LGEGLLLTAQISLVSVAASCVLGTLFGLVLRS--RNQLIRFIGRFYLETIRIVPILVWLF 72 Query: 76 VIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQ 134 +++GL GI D F + T+ A + +++R ++ SI K Q ++ A+GL+R Q Sbjct: 73 GLYFGLSVWTGIHIDGFWVCVWVFTMWGIAEMGDLVRGALESIEKHQVESGLALGLSRGQ 132 Query: 135 TIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY--QP 188 R+I LPQ+I + F ++K++S+AS I + E+ + Q+I+ + QP Sbjct: 133 VFRYIELPQSIRRVLPGAVNLFTRMIKTSSLASLIGVIEVVKVGQQIIENSLLTQP 188 >gi|318060996|ref|ZP_07979717.1| glutamate transporter permease [Streptomyces sp. SA3_actG] Length = 300 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 106/203 (52%), Gaps = 12/203 (5%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTI-ISLIMHFYVWIFRGTPLLVQL---FVIFY 79 TL A IS VI+L +G + R+ SD + + + V FR P+L+ + + ++ Sbjct: 71 TLLAAAISMVIALPLGAVFGIARL--SDHVWVRVPSATVVEFFRSIPVLIMMIVAYAVYA 128 Query: 80 GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + A++ L L ++ ++EI+R+ I+S+PKGQ +A+ AIGL + QT+R I Sbjct: 129 QYTSVSTDDRPLYAVVTGLVLYNASVLAEIVRAGILSLPKGQTEAAQAIGLRKGQTMRSI 188 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC--ELAF 197 +LPQ++T + S+ + I+K T++ +I A R +S Y I C +A Sbjct: 189 LLPQSVTAMLPAIVSQLVVIVKDTAIGGSILGFSELINAVRPLSAAYGANTIACFTIVAV 248 Query: 198 VYLI----LTSFCYIIQIKIESS 216 +Y+I LTS ++ ++ + Sbjct: 249 IYIIVNFTLTSLATWLEKRLRAG 271 >gi|288936652|ref|YP_003440711.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|288891361|gb|ADC59679.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] Length = 221 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 95/179 (53%), Gaps = 7/179 (3%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 DSF L+A + + + A + +I + + +F + +I+ I+ +V + R P Sbjct: 12 DSFIAGLFATLELFITAALAALIIGIALCYFSE-----YQKKVINRIIIGFVSLMRAIPF 66 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L+ ++++YGLP +GI + + A +++L + AY EI+RS G +A+ A G Sbjct: 67 LILAYLLYYGLPQLGISMEPWTAGLLALIIYHGAYFFEILRSQRRVFSGGYIEAAIAQGF 126 Query: 131 TRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 +R R IILP I +SA+PL ++ I LK T+ S IT+ EI A + +T + P Sbjct: 127 SRYAIFRRIILP-NIISSALPLIGNQLIICLKDTAFLSIITVQEITAAANSVQATYFIP 184 >gi|91784416|ref|YP_559622.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91688370|gb|ABE31570.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] Length = 313 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 103/223 (46%), Gaps = 22/223 (9%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTP--- 69 F + + + TL + +S + L G IA R+ + ++ + Y+WI R TP Sbjct: 85 FNKRVMKGLGNTLILTVLSSALGLCFGVLIAACRMA-DNAVLRAAGYVYIWIIRATPPLA 143 Query: 70 ---------LLVQLFVIFYGLPHIGIVFD--------SFVAIIISLTLNFSAYISEIIRS 112 L+ + L H + FD F +I L + Y +EI R Sbjct: 144 MLLFLFFLSALIPRLYLPLPLLHANL-FDIDTNQIISRFSVAVIGLAMYLGGYSAEIFRG 202 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + ++ +GQ +A AIG++ +T+ H+++PQ + PL++E I++ K+TS+ + I Sbjct: 203 GVSAVDRGQREACKAIGMSDFRTMWHVVMPQAVRIIIPPLANELITMFKNTSLVTVIGYV 262 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 E+ T Q I +T ++ + + YL+LTS Q +E Sbjct: 263 ELLTTVQLIYATNFETIPLLTVACIWYLVLTSLAMAAQSLLER 305 >gi|89901103|ref|YP_523574.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89345840|gb|ABD70043.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 391 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 86/149 (57%), Gaps = 1/149 (0%) Query: 53 IISLIMHFYVWIFRGTP-LLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIR 111 +I L W+ G P L + F + + + G + F+A+++ LTL +++I+E++R Sbjct: 221 VIVLAASLLGWLLGGAPTALNRPFKGDFSIENGGALTPEFLAVLLGLTLYTASFIAEVVR 280 Query: 112 SSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITI 171 I S+ GQ +A+ A+GL+R+Q +R ++LPQ + PL+++++++ K++S+A I Sbjct: 281 GGIQSVALGQSEAAAALGLSRQQEMRLVMLPQALRVIIPPLTNQYLNLTKNSSLAVAIGY 340 Query: 172 PEIFQTAQRIVSTTYQPLIIYCELAFVYL 200 P++ A ++ T + + + VYL Sbjct: 341 PDVVSIANTALNQTGRAVECISLVMLVYL 369 >gi|289646274|ref|ZP_06477617.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 233 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 107/211 (50%), Gaps = 10/211 (4%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 K++ ++ + +L+ I TL +A +++ +++ + + IR+ + L+ Y Sbjct: 4 KFDLSAILQGEYAELIVKGIETTLQLAFVAWCMAMEVALLLVSIRLTGNKYAERLVAG-Y 62 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI---------GIVFDSFVAIIISLTLNFSAYISEIIRS 112 V R P LVQL + ++G+P + ++ +I+L L +AY SE IRS Sbjct: 63 VSYHRNVPTLVQLMLWYFGIPTLLTESTQLWLANYSTEYLFSVIALGLCQAAYFSEDIRS 122 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 + +IP GQ +AS A+GL +++R++ILPQ + L + + + K+TS+ I + Sbjct: 123 GLRAIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVV 182 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 E+ + + + T++ Y VYL ++ Sbjct: 183 ELTYATREVENYTFRTFEAYLVATVVYLAIS 213 >gi|167567704|ref|ZP_02360620.1| amino acid ABC transporter, permease/ATP-binding protein [Burkholderia oklahomensis EO147] Length = 489 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 106/199 (53%), Gaps = 26/199 (13%) Query: 38 IGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV----------IFYGLPHIGIV 87 +G +A+ R+ S + + F +W+FR PL+V L + ++ G+P GI Sbjct: 113 LGVPLALARVSRSPLVAACAWAF-IWLFRSIPLVVLLLILNNLGYLYDHVWLGVPFTGIT 171 Query: 88 F---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 F F A ++ LTLN +A+ +E IR I+S+ GQ +A+ A+GL R + Sbjct: 172 FADVATTDLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDPGQLEAAAALGLPRARQATR 231 Query: 139 IILPQTITTSAVPLS-SEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLIIYCEL 195 I+LPQ + + +P++ ++ IS+ K TS+ + +PE+F T Q I + PL++ + Sbjct: 232 IVLPQAM-RAFLPVAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATV 290 Query: 196 AFVYLILTSFCYIIQIKIE 214 YLI+ + I+Q ++E Sbjct: 291 --WYLIILTVLSIVQAQVE 307 >gi|139439417|ref|ZP_01772858.1| Hypothetical protein COLAER_01878 [Collinsella aerofaciens ATCC 25986] gi|133775196|gb|EBA39016.1| Hypothetical protein COLAER_01878 [Collinsella aerofaciens ATCC 25986] Length = 212 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 107/194 (55%), Gaps = 11/194 (5%) Query: 15 QLLY--AAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 LLY V T+ I+ +S SLI G +A+++ + + +++ Y+ +FR TP L+ Sbjct: 8 NLLYIWGGFVKTIEISALSIFFSLIFGTVLALVKSY-APRPFRILVSAYIELFRCTPNLL 66 Query: 73 QLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 + I++ + + IV + I+ TL SA ++EI+R + SIP+GQ++A+ + G Sbjct: 67 WILFIYFTVQGLDIVIST-----IAFTLFTSAVMAEIVRGGLNSIPRGQFEAAQSQGFGF 121 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT---YQPL 189 T+R+IILPQT T L S+ +++K +S S I + E+ TA +++ Q L Sbjct: 122 FATMRYIILPQTFKTIIPALFSQCTTVIKDSSYLSGINVAELMYTANVVMAHAIDLSQVL 181 Query: 190 IIYCELAFVYLILT 203 ++Y + +Y +L Sbjct: 182 MLYGLVFAMYFVLN 195 >gi|90410449|ref|ZP_01218465.1| Putative arginine ABC transporter, permease protein [Photobacterium profundum 3TCK] gi|90328690|gb|EAS44974.1| Putative arginine ABC transporter, permease protein [Photobacterium profundum 3TCK] Length = 229 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 102/181 (56%), Gaps = 14/181 (7%) Query: 35 SLIIGFFIAVIRIFFSDT-----IISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI----- 84 SL++G +AVI F S +++ +V I RG P ++ + IF+G + Sbjct: 24 SLLVGLVLAVI--FASGEMSRSRLVAWPTTAFVTILRGLPEILVVLFIFFGSGQVLFMIT 81 Query: 85 GIVFD--SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 G D FV+ +++L+L F++Y ++ IR ++ ++ GQ +A+ A+G+++ + IILP Sbjct: 82 GDYVDISPFVSGVVALSLIFASYAAQTIRGALKAVNNGQREAASALGISKAHSFFRIILP 141 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 Q + + L+++++ +LK T++ S I + ++ + AQ + T++ Y A +YL++ Sbjct: 142 QAVRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVI 201 Query: 203 T 203 T Sbjct: 202 T 202 >gi|163804164|ref|ZP_02197929.1| putative amino acid ABC transporter, permease protein [Vibrio sp. AND4] gi|159172018|gb|EDP56997.1| putative amino acid ABC transporter, permease protein [Vibrio sp. AND4] Length = 181 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 85/145 (58%), Gaps = 4/145 (2%) Query: 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQ 73 + L A T+ ++ +S + ++ IG IA+ + SD+ + I YV + R P+LV Sbjct: 39 KFLLAGFNDTIQVSLLSMLFAMTIGLIIALPAL--SDSPALKWINRIYVEVIRSIPVLVL 96 Query: 74 LFVIFYGLPHI-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 L ++YG+P + + + F A +I+LT+ SA+++E+ R I +I +GQ +A+ ++GL Sbjct: 97 LLWVYYGMPTLLDVSLNHFWAGVIALTIAESAFMAEVFRGGIQAISRGQHEAAESLGLNY 156 Query: 133 KQTIRHIILPQTITTSAVPLSSEFI 157 Q +R +ILPQ + PL ++F+ Sbjct: 157 WQKMRLVILPQALRQILPPLGNQFV 181 >gi|317488403|ref|ZP_07946956.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp. 1_3_56FAA] gi|316912447|gb|EFV34003.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp. 1_3_56FAA] Length = 324 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 114/222 (51%), Gaps = 7/222 (3%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 Y+W + + +P +L A T+ I+ ++ VI+L +G V+ + ++ I YV Sbjct: 8 YKW-EALFERWPDILMA-FGTTVGISVLALVIALALGIVFGVLSVS-RIPVLRGITRVYV 64 Query: 63 WIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQW 122 + + PLL+Q+FV + P +G+ +F ++++ + YISE++RS I SI +GQ+ Sbjct: 65 EVVQNVPLLLQVFVFYAIFPLLGLSLAAFWIGVLAIGIYHGGYISEVVRSGIGSIHRGQF 124 Query: 123 DASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIV 182 +A+ + G + Q++ IILPQ I PL+ + +++K+TSV + I E+ + Sbjct: 125 EAAKSQGFSYWQSMFVIILPQAIRIIMPPLAVQAANLVKNTSVLALIAGGELMYFSNSFA 184 Query: 183 STT--YQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 T Y P +Y A +Y + + + +E H + Sbjct: 185 GATSYYGP--VYVVAALLYFAICFPLSRLALYLEHRTRSHRH 224 >gi|315444882|ref|YP_004077761.1| amino acid ABC transporter membrane protein 1, PAAT family [Mycobacterium sp. Spyr1] gi|315263185|gb|ADT99926.1| amino acid ABC transporter membrane protein 1, PAAT family [Mycobacterium sp. Spyr1] Length = 226 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 108/207 (52%), Gaps = 13/207 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + + + ++AA T+ + +S + +L++G +A +R+ +++ I YV + R T Sbjct: 3 VFTEYREEIFAAFWTTVQLTVLSAIGALVLGTVLAAMRLA-PVPMLNWIGTAYVNLVRNT 61 Query: 69 PLLVQLFVIFYGLPH-IGIVF-----------DSFVAIIISLTLNFSAYISEIIRSSIIS 116 PL + + +GL +G+ F ++ LT+ ++++ E +R+ + + Sbjct: 62 PLTLIILFCSFGLAQTLGMTLADRQSPTFIADSGFRLAVLGLTVYTASFVCETVRAGVNT 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP GQ +A+ ++GLT Q +R ++LPQ +PL S I++ K+T++AS I + E Sbjct: 122 IPLGQAEAARSLGLTFGQNLRIVLLPQAFRAVVIPLGSVLIALTKNTTIASAIGVAEAAL 181 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 + ++ T L++ A ++ILT Sbjct: 182 LMKEMIENTAAVLVVGGIFALGFVILT 208 >gi|260554426|ref|ZP_05826647.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Acinetobacter baumannii ATCC 19606] gi|260410968|gb|EEX04265.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Acinetobacter baumannii ATCC 19606] Length = 237 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 103/198 (52%), Gaps = 17/198 (8%) Query: 33 VISLIIGFFIAV----IRIFFSDTI-ISLIMHFYVWIFRGTPLLVQLFVIFYGL-----P 82 V+S+ IGF +AV R+ S+ I + + + ++FRGTPL +QL +I+ G+ Sbjct: 31 VLSIGIGFVLAVPLSLARV--SENIWLRGPVWLFTYVFRGTPLYIQLLIIYSGIYSFDYV 88 Query: 83 HIGIVFDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 H D+F I++ LN AY +EI +I SIP G+ +A+ A G+++ + Sbjct: 89 HEHQTLDAFFREGINCTILAFALNTGAYTTEIFAGAIRSIPHGEIEAAQAFGMSKWKLYT 148 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 II+P + + +E I +L +T++A T T+P+I + A+ + + TY + A Sbjct: 149 RIIIPSMLRRALPFYGNEVILMLHATTIAFTATVPDILKIARDVNAATYDTFSAFGIAAL 208 Query: 198 VYLILTSFCYIIQIKIES 215 +Y +L I K+E Sbjct: 209 LYAVLAFILIWIFRKLEK 226 >gi|224368516|ref|YP_002602679.1| GlnP3 [Desulfobacterium autotrophicum HRM2] gi|223691232|gb|ACN14515.1| GlnP3 [Desulfobacterium autotrophicum HRM2] Length = 219 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 77/130 (59%), Gaps = 5/130 (3%) Query: 89 DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS 148 + VA I++L L SA+ S+I R +I+SI GQ +A+ A+GL+ TI H+++PQ I S Sbjct: 81 NRMVAAILALGLCSSAFQSQIFRGAILSIQSGQLEAAKAMGLSLPGTIFHVVIPQMIRLS 140 Query: 149 AVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY-QPLIIYCELAFVYLILTS--- 204 P ++EF S LK TS+A + + EI + A+ +++ TY +Y + +Y LT Sbjct: 141 IGPWTNEFSSELKDTSLAYVVGVVEIMRNAKYVIAYTYGNTAAVYLFVGILYFTLTRIGT 200 Query: 205 -FCYIIQIKI 213 F Y ++ K+ Sbjct: 201 YFFYKLEEKL 210 >gi|126642341|ref|YP_001085325.1| amino acid ABC transporter permease [Acinetobacter baumannii ATCC 17978] Length = 218 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 103/198 (52%), Gaps = 17/198 (8%) Query: 33 VISLIIGFFIAV----IRIFFSDTI-ISLIMHFYVWIFRGTPLLVQLFVIFYGLP----- 82 V+S+ IGF +AV R+ S+ I + + + ++FRGTPL +QL +I+ G+ Sbjct: 12 VLSIGIGFLLAVPLSLARV--SENIWLRGPVWLFTYVFRGTPLYIQLLIIYSGIYSFDYI 69 Query: 83 HIGIVFDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 H D+F I++ LN AY +EI +I SIP G+ +A+ A G+++ + Sbjct: 70 HEHQTLDAFFREGINCTILAFALNTGAYTTEIFAGAIRSIPHGEIEAAQAFGMSKWKLYT 129 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 II+P + + +E I +L +T++A T T+P+I + A+ + + TY + A Sbjct: 130 RIIIPSMLRRALPFYGNEVILMLHATTIAFTATVPDILKIARDVNAATYDTFSAFGIAAV 189 Query: 198 VYLILTSFCYIIQIKIES 215 +Y +L I K+E Sbjct: 190 LYAVLAFILIWIFRKLEK 207 >gi|55821629|ref|YP_140071.1| polar amino acid ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55737614|gb|AAV61256.1| polar amino acid ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] Length = 323 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 111/231 (48%), Gaps = 25/231 (10%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + + D+ P+++ + +TL + LI+ AV++I I+ I +V Sbjct: 84 WKAVFDAVPKIV-ERLPLTLGLTIAGAFFGLILALVFAVVKIN-RVRILYPIQAVFVSFL 141 Query: 66 RGTPLLVQLFVIFYGLP--------HIGIVFD-----SFVAIIISLTLNFSAYISEIIRS 112 RGTP+LVQL + +YG+P G+ ++ + I + N +AY+SE IR+ Sbjct: 142 RGTPILVQLMLTYYGIPLFLRYLNGEFGLDWNINEIPPAIFAITAFAFNEAAYMSETIRA 201 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I ++ G+ +A+ ++G+T Q R +I+P + L + I + K TS+A + I Sbjct: 202 AIQAVDAGEIEAARSLGMTSAQVYRRVIIPNAAVIATPSLINSLIGLTKGTSLAFSAGIV 261 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE---SSVTQH 220 E++ AQ + Y+ Y +A VY + I I IE SV H Sbjct: 262 EMYAQAQILGGADYRYFERYISVALVY-------WAISILIEYIGRSVENH 305 >gi|307323373|ref|ZP_07602583.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] gi|306890862|gb|EFN21838.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] Length = 334 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/188 (33%), Positives = 108/188 (57%), Gaps = 23/188 (12%) Query: 32 FVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIF-----YGLPHIGI 86 V+ ++G +AV+R+ ++ ++S++ YVWIFR TPLLVQL F Y +G+ Sbjct: 95 MVLGFLLGIPLAVMRLS-TNPVLSILSWGYVWIFRSTPLLVQLLFWFNIGALYPTLGLGL 153 Query: 87 VFD-SFVAI------------IISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 F FV + +I LTL+ +AY +E+IR I+S+ GQ +A+ A+GL R+ Sbjct: 154 PFGPQFVTVKTVNLLGPTLTAVIGLTLHEAAYAAEVIRGGILSVDSGQTEAAQALGLGRR 213 Query: 134 QTIRHIILPQTITTSAVPLSSE-FISILKSTSVASTITIPEIFQTAQRIVSTTYQ--PLI 190 +T+R I++PQ + S VP + I LK TS+ S + + ++ + Q + + +YQ PL+ Sbjct: 214 RTLRRIVIPQAM-RSIVPTAGNMLIGTLKGTSIVSVLAVHDLLYSVQLVYNQSYQVIPLL 272 Query: 191 IYCELAFV 198 + L ++ Sbjct: 273 MVATLWYI 280 >gi|255326763|ref|ZP_05367839.1| L-cystine transport system permease protein TcyB [Rothia mucilaginosa ATCC 25296] gi|255295980|gb|EET75321.1| L-cystine transport system permease protein TcyB [Rothia mucilaginosa ATCC 25296] Length = 267 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 108/208 (51%), Gaps = 9/208 (4%) Query: 6 FNLII--DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 FNL + FP ++ A+ TL + F++ L G +A++RI S I YV Sbjct: 43 FNLDVAAQQFPDVITVALKNTLLYTTLGFIVGLSGGLLLALMRIS-SIAPYRWIATLYVE 101 Query: 64 IFRGTPLLVQLFVIFYGLP-HIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 +FRG P L+ F YG+P I F D+ + + +SL + +AYISE++R+ + +IPKGQ Sbjct: 102 LFRGIPALLVFFAFGYGIPLAFKIRFVDNLIPVTLSLGMVSAAYISEVLRAGLQAIPKGQ 161 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++G++ + + II+PQ PL++E I + K +S+ + + +Q Sbjct: 162 MEAARSLGMSHTRAMISIIIPQAFRVVLPPLTNEVILLTKDSSLVYLLGV----TVSQYE 217 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYII 209 ++ + + L++ CY+I Sbjct: 218 LAKFGREGLTAANAGLTPLVVAGLCYLI 245 >gi|209517852|ref|ZP_03266686.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209501685|gb|EEA01707.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 229 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/219 (22%), Positives = 108/219 (49%), Gaps = 12/219 (5%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 ++ F LL A VT+ +A +S S +G A ++ ++ +++ I Y + R Sbjct: 1 MLFQGFGPLLLAGTWVTIKLAVLSLAASFALGLVGAAAKLS-TNRVVARIGTLYTTLIRA 59 Query: 68 TPLLVQLFVIFYG----LPHIGIVF-------DSFVAIIISLTLNFSAYISEIIRSSIIS 116 P LV + ++FY L + +F D F+A +I+L + AY +E R + ++ Sbjct: 60 VPDLVLMLLLFYSIQIWLNQLTDMFSMEQIDIDPFLAGVITLGFIYGAYFTETFRGAFLA 119 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P+GQ +A +A G++ ++ I+ PQ + + + + + ++K+T++ S I + ++ + Sbjct: 120 VPRGQIEAGFAYGMSARRVFTRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVK 179 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 +Q +T +YL +T+ ++ ++E Sbjct: 180 ASQDAGKSTQSFFFFTLATGAIYLAITTISNLVLNRLEK 218 >gi|145224551|ref|YP_001135229.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium gilvum PYR-GCK] gi|145217037|gb|ABP46441.1| amino acid ABC transporter membrane protein 1, PAAT family [Mycobacterium gilvum PYR-GCK] Length = 226 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 108/207 (52%), Gaps = 13/207 (6%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGT 68 + + + ++AA T+ + +S + +L++G +A +R+ +++ I YV + R T Sbjct: 3 VFTEYREEIFAAFWTTVQLTVLSAIGALVLGTVLAAMRLA-PVPMLNWIGTAYVNLVRNT 61 Query: 69 PLLVQLFVIFYGLPH-IGIVF-----------DSFVAIIISLTLNFSAYISEIIRSSIIS 116 PL + + +GL +G+ F ++ LT+ ++++ E +R+ + + Sbjct: 62 PLTLIILFCSFGLAQTLGLTLADRQSPTFIADSGFRLAVLGLTVYTASFVCETVRAGVNT 121 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 IP GQ +A+ ++GLT Q +R ++LPQ +PL S I++ K+T++AS I + E Sbjct: 122 IPLGQAEAARSLGLTFGQNLRIVLLPQAFRAVVIPLGSVLIALTKNTTIASAIGVAEAAL 181 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILT 203 + ++ T L++ A ++ILT Sbjct: 182 LMKEMIENTAAVLVVGGIFALGFVILT 208 >gi|226331012|ref|ZP_03806530.1| hypothetical protein PROPEN_04942 [Proteus penneri ATCC 35198] gi|225201807|gb|EEG84161.1| hypothetical protein PROPEN_04942 [Proteus penneri ATCC 35198] Length = 224 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 113/210 (53%), Gaps = 11/210 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 +++W + ++ S P L + +TL I + V+ ++ G +AV+R+ + IS Y Sbjct: 3 EFDWSS-VVPSLP-FLVDGMAITLKITITAIVVGILWGTVLAVMRLS-TFKPISWFAAAY 59 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI-----GIVFDS---FVAIIISLTLNFSAYISEIIRSS 113 V FR PL++ L + +P+I G+ S ++ +I+ +L +AY SEIIR+ Sbjct: 60 VNTFRSIPLVMVLLWFYLIVPNILQNVLGLSPKSDIRLISAMIAFSLFEAAYYSEIIRAG 119 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I S+ KGQ+ AS A+G+T+ QT+R +ILPQ L ++ I + + TS+ +++ + Sbjct: 120 IQSVSKGQFSASLALGMTKSQTMRLVILPQAFRAMIPLLLTQGIVLFQDTSLVYVLSLTD 179 Query: 174 IFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 F+TA I + + FVY +++ Sbjct: 180 FFRTAANIGERDGTQVEMILFAGFVYFVIS 209 >gi|167564082|ref|ZP_02356998.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia oklahomensis EO147] gi|167571224|ref|ZP_02364098.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia oklahomensis C6786] Length = 225 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 104/188 (55%), Gaps = 11/188 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 +++W + I + P L AI+ TL I ++ V+ ++ G +A++R+ + + Y Sbjct: 3 QFDWSS-IPGALPTLWTGAII-TLQITALAIVVGIVWGTLLALMRLSGVKPL-AWFAQGY 59 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI--GIVFDS------FVAIIISLTLNFSAYISEIIRSS 113 V +FR PL++ L F +P + G++ S + +++ +L +AY SEIIR+ Sbjct: 60 VTVFRSIPLVMVLLWFFLIVPQLLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSEIIRAG 119 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++P+GQ +AS+A+G+ Q +R +ILPQ L ++ I + + TS+ I++ + Sbjct: 120 IQAVPRGQVNASFALGMNYAQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYVISLAD 179 Query: 174 IFQTAQRI 181 F+TA I Sbjct: 180 FFRTAANI 187 >gi|89073070|ref|ZP_01159617.1| putative ABC-type amino acid transport system, permease component [Photobacterium sp. SKA34] gi|89051288|gb|EAR56744.1| putative ABC-type amino acid transport system, permease component [Photobacterium sp. SKA34] Length = 365 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 4/194 (2%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ +++TL IA + V+SL IG +A+ R II I Y+ ++RG PL+ LF+ Sbjct: 154 LWGGLLITLVIAIVGIVVSLPIGVVLALGRRS-EMPIIRSICTVYIELWRGVPLITVLFM 212 Query: 77 IFYGLP---HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 LP + + + +I + + +AY++E+IR + +IPKGQ++A+ A+GLT Sbjct: 213 ASVMLPLFLSAEMETNKLIRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLTYW 272 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 + + I+LPQ + + + + FI + K TS+ I + ++ Q S Sbjct: 273 KKMYLIVLPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAATSDPEWLGFATE 332 Query: 194 ELAFVYLILTSFCY 207 FV L+ FC+ Sbjct: 333 SYVFVALVFWIFCF 346 >gi|193077846|gb|ABO12723.2| Amino acid ABC transporter permease protein [Acinetobacter baumannii ATCC 17978] Length = 237 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 103/198 (52%), Gaps = 17/198 (8%) Query: 33 VISLIIGFFIAV----IRIFFSDTI-ISLIMHFYVWIFRGTPLLVQLFVIFYGLP----- 82 V+S+ IGF +AV R+ S+ I + + + ++FRGTPL +QL +I+ G+ Sbjct: 31 VLSIGIGFLLAVPLSLARV--SENIWLRGPVWLFTYVFRGTPLYIQLLIIYSGIYSFDYI 88 Query: 83 HIGIVFDSFV-----AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIR 137 H D+F I++ LN AY +EI +I SIP G+ +A+ A G+++ + Sbjct: 89 HEHQTLDAFFREGINCTILAFALNTGAYTTEIFAGAIRSIPHGEIEAAQAFGMSKWKLYT 148 Query: 138 HIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAF 197 II+P + + +E I +L +T++A T T+P+I + A+ + + TY + A Sbjct: 149 RIIIPSMLRRALPFYGNEVILMLHATTIAFTATVPDILKIARDVNAATYDTFSAFGIAAV 208 Query: 198 VYLILTSFCYIIQIKIES 215 +Y +L I K+E Sbjct: 209 LYAVLAFILIWIFRKLEK 226 >gi|294632492|ref|ZP_06711052.1| amino acid ABC transporter, permease [Streptomyces sp. e14] gi|292835825|gb|EFF94174.1| amino acid ABC transporter, permease [Streptomyces sp. e14] Length = 333 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 111/215 (51%), Gaps = 22/215 (10%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQL----- 74 ++VTL + +S V+ L+ G +A+ R+ S ++ + YVW FR PL+V L Sbjct: 85 GLLVTLEVTALSAVLGLLGGVLLALARLSRSP-VLRAVGWLYVWAFRSIPLIVVLIFLYN 143 Query: 75 FVIFYGLPHIGIVFD-------------SFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 F Y +G+ F V ++ L+LN +AY +E++R ++S+ +GQ Sbjct: 144 FSALYQTLSVGVPFGPAFFRFDESRLATDMVVAVVGLSLNEAAYAAEVVRGGVLSVDQGQ 203 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ A+GL R I+LPQ + + ++ I ++K+TS+ +++ ++F TAQ Sbjct: 204 HEAAAALGLPRGYRFTRIVLPQALRSIVPNYVNQLIGLVKATSLVFYVSLLDLFGTAQ-T 262 Query: 182 VSTTYQPLIIYCELAFV--YLILTSFCYIIQIKIE 214 + +TY I+ L YLILTS + Q +E Sbjct: 263 MGSTYPGDIVPLLLVVTVWYLILTSLFSVAQFYVE 297 >gi|262278401|ref|ZP_06056186.1| ABC-type arginine/histidine transport system protein [Acinetobacter calcoaceticus RUH2202] gi|262258752|gb|EEY77485.1| ABC-type arginine/histidine transport system protein [Acinetobacter calcoaceticus RUH2202] Length = 237 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 17/155 (10%) Query: 61 YVWIFRGTPLLVQLFVIFYGLP-----HIGIVFDSFVAIIISLT-----LNFSAYISEII 110 Y ++FRGTPL +QL +I+ G+ H D+F I+ T LN AY +EI Sbjct: 62 YTYVFRGTPLYIQLLIIYSGIYSFDYIHEHQTLDAFFREGINCTILVFALNTGAYTTEIF 121 Query: 111 RSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTIT 170 +I SIP G+ +A+ A G+++ + II+P + + +E I +L +T++A T T Sbjct: 122 AGAIRSIPHGEIEAAQAFGMSKWKLYTRIIIPSMLRRALPFYGNEVILMLHATTIAFTAT 181 Query: 171 IPEIFQTAQRIVSTTYQPL-------IIYCELAFV 198 +P+I + A+ + + TY ++Y LAF+ Sbjct: 182 VPDILKIARDVNAATYDTFNAFGIAAVLYAMLAFI 216 >gi|126434727|ref|YP_001070418.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium sp. JLS] gi|126234527|gb|ABN97927.1| amino acid ABC transporter membrane protein 1, PAAT family [Mycobacterium sp. JLS] Length = 226 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/199 (29%), Positives = 105/199 (52%), Gaps = 13/199 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL-LVQLF 75 ++ A T+ + S V +LI+G +A IR+ ++S + YV + R TPL L+ LF Sbjct: 11 IFEAFWTTIQLTVYSAVGALILGTVLAGIRLS-PVPMLSWLGTAYVNVIRNTPLTLIILF 69 Query: 76 VIFYGLPHIGIVF-----------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 F +GI +F ++ LT+ ++++ E +RS + ++P GQ +A Sbjct: 70 CSFGVSQTLGITLVDPQSSTSIEDSNFRLAVLGLTVYTASFVCETVRSGVNTVPLGQAEA 129 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++GLT Q +R I+LPQ + +PL S I++ K+T++AS I + E + ++ Sbjct: 130 ARSLGLTFSQNLRMILLPQAFRSVIIPLGSVLIALTKNTTIASAIGVAEAALLMKEMIEN 189 Query: 185 TYQPLIIYCELAFVYLILT 203 T L++ A ++ILT Sbjct: 190 TAALLVVGSIFALGFIILT 208 >gi|271968859|ref|YP_003343055.1| amino acid ABC transporter permease [Streptosporangium roseum DSM 43021] gi|270512034|gb|ACZ90312.1| ABC-type amino acid transport system permease component-like protein [Streptosporangium roseum DSM 43021] Length = 367 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 102/195 (52%), Gaps = 17/195 (8%) Query: 20 AIVVTLPIACISFVISLIIGFFIAVIRIFFSDTI--ISLIMHFYVWIFRGTPLLVQLFVI 77 A+++ + IA + +++++ G +A+ R+ + + Y+ +FRG P +V ++++ Sbjct: 158 ALLINVEIAIGAQILAMVFGLLLAIGRLLPGKGFWPVRALCIAYIDVFRGIPSVVLIYLV 217 Query: 78 FYGLPHIGIVF----DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRK 133 +GLP + D + +++L+L +SAY +E+ R+ I SI K Q A+ ++GL++ Sbjct: 218 CFGLPLTEVPILSEGDPILYAVVALSLTYSAYNAELYRAGIESINKSQTSAALSMGLSQP 277 Query: 134 QTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYC 193 +R +ILPQ A P+ S FI + K T++ + I + F A+ IY Sbjct: 278 DVLRFVILPQMSRNIAAPMLSTFIGLQKDTALVIVVGIIDAFSQAK-----------IYS 326 Query: 194 ELAFVYLILTSFCYI 208 F +T+ C++ Sbjct: 327 ANDFNLSAVTAVCFL 341 >gi|222102717|ref|YP_002539756.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] gi|221739318|gb|ACM40051.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] Length = 240 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/232 (23%), Positives = 121/232 (52%), Gaps = 20/232 (8%) Query: 5 WFNLI---IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISL-IMHF 60 WF L+ + L +++ I+ +++I L++G A+ ++ S ++++ Sbjct: 7 WFTLLSFGDQGWSDELLQGAWLSIKISLSAYLIGLVLGLVGAIAKL--SKSVVARSFAGT 64 Query: 61 YVWIFRGTPLLVQLFVIFYG----------LPHIGIVF--DSFVAIIISLTLNFSAYISE 108 Y + R P ++ +F+I+Y + + + F + F+A ISL + Y +E Sbjct: 65 YTTVIRSVPDILVIFLIYYSATDALSYLLSMSGLSVEFQLNGFIAAAISLGVVQGGYSTE 124 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 ++R +I+++ +GQ +A++A+GLTRKQ +I+PQ + + L + ++ +LK +S+ S Sbjct: 125 VLRGAIVAVARGQTEAAFAVGLTRKQAFFLVIIPQMLPLALPGLGNLWLIVLKESSLVSL 184 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYII--QIKIESSVT 218 I E+ + T L+ Y + V+LI++ ++ +++++S+T Sbjct: 185 IGFTELVLVGKMAAGATRHYLLFYAAVGVVFLIMSGASTLVFHYLEVKTSLT 236 >gi|16119238|ref|NP_395944.1| deoxyfructosyl-amino acid ABC-type membrane transporter [Agrobacterium tumefaciens str. C58] gi|5257497|gb|AAD41366.1|AF151698_3 GlnP/GlnQ-like protein [Agrobacterium tumefaciens str. C58] gi|15161737|gb|AAK90385.1| Deoxyfructosyl-amino acid ABC-type Membrane Transporter [Agrobacterium tumefaciens str. C58] Length = 502 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 14/209 (6%) Query: 4 EWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 +W N + + P ++ + TL +A S V+ + IG +A++ I S + + Y Sbjct: 13 DW-NAMAEVLPTMITVGLKNTLILAATSTVLGVAIGMMLAIMGISRS-PWLRIPARLYTD 70 Query: 64 IFRGTPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSIISIPKG 120 IFRG P +V + +I G IG + I++L+L AYI EI RS I S+ +G Sbjct: 71 IFRGLPAIVTILLIGQGFARIGRELFGPSPYPLGILALSLIAGAYIGEIFRSGIQSVDRG 130 Query: 121 QWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS----VASTITIPEIFQ 176 Q +A A+ ++ Q +R I++PQ + L ++FI +K +S + + EIF+ Sbjct: 131 QMEACRALSMSYGQGMRLIVVPQGVRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFR 190 Query: 177 TAQR--IVSTTYQPLIIYCELAFVYLILT 203 Q +V+ PL++ YLI+T Sbjct: 191 VGQDQAVVTGNLSPLLLA---GVFYLIVT 216 >gi|322373587|ref|ZP_08048123.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus sp. C150] gi|321278629|gb|EFX55698.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus sp. C150] Length = 307 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/228 (26%), Positives = 111/228 (48%), Gaps = 19/228 (8%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + + D+ P+++ + +TL + LI+ AV++I I+ I +V Sbjct: 68 WKAVFDAVPKIV-ERLPLTLGLTIAGAFFGLILALVFAVVKIN-RVRILYPIQAVFVSFL 125 Query: 66 RGTPLLVQLFVIFYGLP--------HIGIVFD-----SFVAIIISLTLNFSAYISEIIRS 112 RGTP+LVQL + +YG+P G+ ++ + I + N +AY+SE IR+ Sbjct: 126 RGTPILVQLMLTYYGIPLFLRYLNGEFGLDWNINEIPPAIFAITAFAFNEAAYMSETIRA 185 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I ++ G+ +A+ ++G+T Q R +I+P + L + I + K TS+A + I Sbjct: 186 AIQAVDAGEIEAARSLGMTSAQVYRRVIIPNAAVIATPSLINSLIGLTKGTSLAFSAGIV 245 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 E++ AQ + Y+ Y +A VY ++ I+ I SV H Sbjct: 246 EMYAQAQILGGADYRYFERYISVALVYWGIS----ILIENIGRSVENH 289 >gi|307323416|ref|ZP_07602626.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] gi|306890905|gb|EFN21881.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] Length = 261 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 86/154 (55%), Gaps = 2/154 (1%) Query: 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLV 72 FP ++ A+V T + F L++G +A++R+ L + Y+ FRG P L+ Sbjct: 50 FPDIITTALVNTAVYTLLGFGFGLVLGVVLALMRLSQVPPYRWLAVA-YIEFFRGVPALL 108 Query: 73 QLFVIFYGLP-HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 + +G+P + D V ++++L L +AYI+E +R+ I ++PKGQ +A+ ++G++ Sbjct: 109 VFIALGFGVPLAFQVALDRHVTVMLALGLVGAAYIAETMRAGIQAVPKGQMEAARSLGMS 168 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSV 165 + + II+PQ PL++E + + K +S+ Sbjct: 169 HSRAMASIIVPQAFRIVLPPLTNELVLLTKDSSL 202 >gi|225871086|ref|YP_002747033.1| ABC transporter permease protein [Streptococcus equi subsp. equi 4047] gi|225700490|emb|CAW94927.1| ABC transporter permease protein [Streptococcus equi subsp. equi 4047] Length = 280 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 18/211 (8%) Query: 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYV 62 + W + + D+ P ++ + +TL + + L + A+++I I+ I +V Sbjct: 39 FSW-HAVFDAIPDIIRR-LPITLGLTIAGAALGLFLALVFAIVKIN-RVRILYPIQAVFV 95 Query: 63 WIFRGTPLLVQLFVIFYGLP--------------HIGIVFDSFVAIIISLTLNFSAYISE 108 RGTP+LVQL + +YG+P +I + S AI + N +AY SE Sbjct: 96 SFLRGTPILVQLMLSYYGIPLFLKFLNQRYGFDWNINAIPASIFAIT-AFAFNEAAYTSE 154 Query: 109 IIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAST 168 IR++I S+ G+ +A+ ++G+T Q R +I+P + L + I + K TS+A Sbjct: 155 TIRAAIQSVHTGEIEAAKSLGMTSAQVYRRVIIPNAAVVATPTLINGLIGLTKGTSLAFN 214 Query: 169 ITIPEIFQTAQRIVSTTYQPLIIYCELAFVY 199 I E+F AQ + Y+ Y +A VY Sbjct: 215 AGIVEMFAQAQILGGADYRYFERYISVALVY 245 >gi|89070520|ref|ZP_01157809.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Oceanicola granulosus HTCC2516] gi|89043827|gb|EAR50025.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Oceanicola granulosus HTCC2516] Length = 662 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 120/216 (55%), Gaps = 20/216 (9%) Query: 18 YAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLF- 75 + ++ L I ++SL +G +A+ R SD II+ + ++ I RG PL+V LF Sbjct: 453 FGGFMLALIIGLSGIILSLPLGILLALGRQ--SDLFIINKVSVAFIEIIRGVPLIVWLFT 510 Query: 76 ---VIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 ++ Y LP G FD + +II +TL SAYI+E++R + ++P GQ++A+ A+GL Sbjct: 511 AQLLLNYFLPP-GTNFDLLLRVIIMVTLFASAYIAEVVRGGLAALPTGQYEAADALGLDY 569 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +++R ++LPQ + S + + FI + K T++ I + + + I ++T + IY Sbjct: 570 GKSMRLVVLPQALKISIPGIVNTFIGLFKDTTLVVFIGLLDPIGLSNTIRAST-EWNGIY 628 Query: 193 CELAFVYLILTSF--CYIIQIKIESSVTQHTYSVDK 226 EL FV++ L F C+ S+ +++ S++K Sbjct: 629 WEL-FVFIGLLFFICCF--------SMGRYSLSLEK 655 >gi|330809874|ref|YP_004354336.1| amino-acid ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377982|gb|AEA69332.1| Amino-acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 236 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 83/156 (53%), Gaps = 10/156 (6%) Query: 58 MHFYVWIFRGTPLLVQLFVIFYGL---------PHIGIVF-DSFVAIIISLTLNFSAYIS 107 + FY ++FRGTPL +QL + + G+ P + F D+ I++ LN AY + Sbjct: 59 VQFYTYLFRGTPLYIQLLICYTGIYSLAAIRAQPVLDAFFRDAMNCTILAFALNTCAYTT 118 Query: 108 EIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVAS 167 EI +I +I G+ +A+ A GL+ + +I+P + S S+E I +L ST+VA Sbjct: 119 EIFAGAIRNIAHGEVEAAKAYGLSGWKLYAFVIMPSALRRSLPYYSNEVILMLHSTTVAF 178 Query: 168 TITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 T T+P+I + A+ S T+ + A +YL +T Sbjct: 179 TATVPDILKVARDANSATFLTFQSFGVAALIYLAVT 214 >gi|290510296|ref|ZP_06549666.1| binding-protein-dependent transport system inner membrane component [Klebsiella sp. 1_1_55] gi|289777012|gb|EFD85010.1| binding-protein-dependent transport system inner membrane component [Klebsiella sp. 1_1_55] Length = 221 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 95/179 (53%), Gaps = 7/179 (3%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 DSF L+A + + + A + +I + + +F + +I+ I+ +V + R P Sbjct: 12 DSFIAGLFATLELFITAALAALIIGIALCYFSE-----YQKKMINRIIIGFVSLMRAIPF 66 Query: 71 LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGL 130 L+ ++++YGLP +GI + + A +++L + AY EI+RS G +A+ A G Sbjct: 67 LILAYLLYYGLPQLGISMEPWTAGLLALIIYHGAYFFEILRSQRRVFSGGYIEAAIAQGF 126 Query: 131 TRKQTIRHIILPQTITTSAVPL-SSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQP 188 +R R IILP I +SA+PL ++ I LK T+ S IT+ EI A + +T + P Sbjct: 127 SRYAIFRRIILP-NIISSALPLIGNQLIICLKDTAFLSIITVQEITAAANSVQATYFIP 184 >gi|126727121|ref|ZP_01742958.1| putative glutamine ABC transporter permease protein [Rhodobacterales bacterium HTCC2150] gi|126703549|gb|EBA02645.1| putative glutamine ABC transporter permease protein [Rhodobacterales bacterium HTCC2150] Length = 287 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 113/211 (53%), Gaps = 13/211 (6%) Query: 2 KYEWFN--LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMH 59 + +FN ++ SFP+LL A + + A + I+ I+G IA+ R S + L + Sbjct: 62 QKSFFNGAVLAKSFPKLLEAFKINIMIFAWSAPAIA-ILGLLIALARDVKSPALFPLKIF 120 Query: 60 FYVW--IFRGTPLLVQLFVIFYGLPHIGIVF---DSFVAIIISLTLNFSAYISEIIRSSI 114 V+ +FRG P+++ +++I +G+P +G+ ++ ++L L +SAY++EI RS I Sbjct: 121 GAVFTDVFRGVPVILTVYLIGFGIPGLGLPRPWNSPYIWGSLALILTYSAYVAEIFRSGI 180 Query: 115 ISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEI 174 S+ Q A+ ++GL+ +Q +R ++LPQ I + I++ K S+ S I EI Sbjct: 181 DSVHHSQRSAALSLGLSERQVMRDVVLPQAIRNVVPSQMNMLIALQKDVSLLSFIGPVEI 240 Query: 175 FQTAQRIVS--TTYQPLIIYCELAFVYLILT 203 F+ A S + P Y A ++LI+T Sbjct: 241 FRQAGVFKSLLANFTP---YVGAALIFLIVT 268 >gi|54025809|ref|YP_120051.1| putative glutamate transporter permease [Nocardia farcinica IFM 10152] gi|54017317|dbj|BAD58687.1| putative glutamate transporter permease protein [Nocardia farcinica IFM 10152] Length = 299 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 105/196 (53%), Gaps = 8/196 (4%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 T+ A +S V +++IG ++R+ SD + ++ V R P+L+ L + + L Sbjct: 73 TIVAALLSIVFAMVIGMVFGILRL--SDHRWVRIVAGAIVEFARAIPVLI-LMIFLFALY 129 Query: 83 HIGIVFDS----FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRH 138 +F S A++ +LT+ + I+EI+R+ I S+P+GQ +A+ A+GL + Q +R Sbjct: 130 SEYDLFKSDDLALAAVVTALTVYNGSVIAEIVRAGIRSLPRGQTEAAMALGLRKNQLMRL 189 Query: 139 IILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFV 198 I+LPQ IT L S+ + LK T++ IT EI ++ Q++ ++ + +A V Sbjct: 190 ILLPQAITAMLPALISQMVVALKDTALGYQITYVEIVRSGQQLGASESNTIPALIVVAVV 249 Query: 199 YLILTSFCYIIQIKIE 214 + L S ++ ++E Sbjct: 250 MIALNSTLTVVATRLE 265 >gi|55823557|ref|YP_141998.1| ABC transporter amino acid permease [Streptococcus thermophilus CNRZ1066] gi|55739542|gb|AAV63183.1| ABC transporter amino acid permease protein [Streptococcus thermophilus CNRZ1066] Length = 285 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 111/231 (48%), Gaps = 25/231 (10%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + + D+ P+++ + +TL + LI+ AV++I I+ I +V Sbjct: 46 WKAVFDAVPKIV-ERLPLTLGLTIAGAFFGLILALVFAVVKIN-RVRILYPIQAVFVSFL 103 Query: 66 RGTPLLVQLFVIFYGLP--------HIGIVFD-----SFVAIIISLTLNFSAYISEIIRS 112 RGTP+LVQL + +YG+P G+ ++ + I + N +AY+SE IR+ Sbjct: 104 RGTPILVQLMLTYYGIPLFLRYLNGEFGLDWNINEIPPAIFAITAFAFNEAAYMSETIRA 163 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I ++ G+ +A+ ++G+T Q R +I+P + L + I + K TS+A + I Sbjct: 164 AIQAVDAGEIEAARSLGMTSAQVYRRVIIPNAAVIATPSLINSLIGLTKGTSLAFSAGIV 223 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIE---SSVTQH 220 E++ AQ + Y+ Y +A VY + I I IE SV H Sbjct: 224 EMYAQAQILGGADYRYFERYISVALVY-------WAISILIEYIGRSVENH 267 >gi|283457453|ref|YP_003362030.1| amino acid ABC transporter permease [Rothia mucilaginosa DY-18] gi|283133445|dbj|BAI64210.1| ABC-type amino acid transport system, permease component [Rothia mucilaginosa DY-18] Length = 267 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 9/208 (4%) Query: 6 FNLIIDS--FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVW 63 FNL + + FP ++ A+ TL + F++ L G +A++RI S I YV Sbjct: 43 FNLDVAAAQFPDVITVALKNTLLYTTLGFIVGLSGGLLLALMRIS-SIAPYRWIATLYVE 101 Query: 64 IFRGTPLLVQLFVIFYGLP-HIGIVF-DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQ 121 +FRG P L+ F YG+P I F D+ + + +SL + +AYISE++R+ + +IPKGQ Sbjct: 102 LFRGIPALLVFFAFGYGIPLAFKIRFVDNLIPVTLSLGMVSAAYISEVLRAGLQAIPKGQ 161 Query: 122 WDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 +A+ ++G++ + + II+PQ PL++E I + K +S+ + + +Q Sbjct: 162 MEAARSLGMSHTRAMISIIIPQAFRVVLPPLTNEVILLTKDSSLVYLLGV----TVSQYE 217 Query: 182 VSTTYQPLIIYCELAFVYLILTSFCYII 209 ++ + + L++ CY+I Sbjct: 218 LAKFGREGLTAANAGLTPLVVAGLCYLI 245 >gi|116628342|ref|YP_820961.1| ABC-type amino acid transport system, permease component [Streptococcus thermophilus LMD-9] gi|116101619|gb|ABJ66765.1| ABC-type amino acid transport system, permease component [Streptococcus thermophilus LMD-9] gi|312278968|gb|ADQ63625.1| ABC-type amino acid transport system, permease component [Streptococcus thermophilus ND03] Length = 307 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 15/223 (6%) Query: 6 FNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF 65 + + D+ P+++ + +TL + LI+ AV++I I+ I +V Sbjct: 68 WKAVFDAVPKIV-ERLPLTLGLTIAGAFFGLILALVFAVVKIN-RVRILYPIQAVFVSFL 125 Query: 66 RGTPLLVQLFVIFYGLP--------HIGIVFD-----SFVAIIISLTLNFSAYISEIIRS 112 RGTP+LVQL + +YG+P G+ ++ + I + N +AY+SE IR+ Sbjct: 126 RGTPILVQLMLTYYGIPLFLRYLNGEFGLDWNINEIPPAIFAITAFAFNEAAYMSETIRA 185 Query: 113 SIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP 172 +I ++ G+ +A+ ++G+T Q R +I+P + L + I + K TS+A + I Sbjct: 186 AIQAVDAGEIEAARSLGMTSAQVYRRVIIPNAAVIATPSLINSLIGLTKGTSLAFSAGIV 245 Query: 173 EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIES 215 E++ AQ + Y+ Y +A VY ++ I +E+ Sbjct: 246 EMYAQAQILGGADYRYFERYISVALVYWAISILIEYIGRSVEN 288 >gi|121608890|ref|YP_996697.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121553530|gb|ABM57679.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 228 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/208 (25%), Positives = 103/208 (49%), Gaps = 13/208 (6%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 ++I+ P + A + VT+ +A S +++ +G A ++ S +++L+ Y + RG Sbjct: 1 MLIEHVPHI-AAGVTVTMTVALGSLAVAVALGLVGAACKLSGSR-LLTLLAATYSTLVRG 58 Query: 68 TPLLVQLFVIFYG-----------LPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIIS 116 P LV L +FYG + + D +A I ++ F AY++E R++I++ Sbjct: 59 VPELVWLLFLFYGAQILINQTSATMGWQAVEIDPMLAGITTIGFIFGAYMTETFRAAIMA 118 Query: 117 IPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQ 176 +P GQ +A + G++ + I LPQ + + S+ ++ ++KST++ S I + ++ Sbjct: 119 VPSGQAEAGLSFGMSPLRVFWRITLPQMVRFALPSFSNNWMVLIKSTALVSVIGLNDLMH 178 Query: 177 TAQRIVSTTYQPLIIYCELAFVYLILTS 204 A S T Y + VYL +T Sbjct: 179 RAAMAKSATRDSFGAYLVVCVVYLAITG 206 >gi|300718064|ref|YP_003742867.1| octopine ABC transporter permease [Erwinia billingiae Eb661] gi|299063900|emb|CAX61020.1| octopine ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 239 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/225 (24%), Positives = 111/225 (49%), Gaps = 14/225 (6%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 D + +L A VT+ ++ +F++ +IG +A +I + + + Y + RG P Sbjct: 13 DGWGPVLLKAAGVTVSVSLCAFLLGSVIGSLVAWAKIG-GNRWMRRLAEGYTVVLRGIPD 71 Query: 71 LVQLFVIFYGLPHI--------GIV--FD--SFVAIIISLTLNFSAYISEIIRSSIISIP 118 L+ +++ ++G + G+ FD FVA +++ L A +E+ R S SIP Sbjct: 72 LIVIYIFYFGGRQVLAFFGHALGMQGPFDISGFVAGALAIGLISGAGQAEVFRGSYHSIP 131 Query: 119 KGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTA 178 KG +A+ +G+ + R +I+PQ +TT+ L +++ S +K +++ S + E Sbjct: 132 KGTLEAATVVGMGKWLMFRRVIVPQALTTAIPGLGNQWQSAIKESALVSVTGLVETMNQV 191 Query: 179 QRIVSTTYQPLIIYCELAFVYLILTSFC-YIIQIKIESSVTQHTY 222 Q +T P + A +YL++T+ ++I+ + S+ Y Sbjct: 192 QVASGSTQMPFFFFAVGAVIYLLITTVSEFVIRQAEKWSLRGQNY 236 >gi|90410650|ref|ZP_01218666.1| putative ABC-type amino acid transport system, permease component [Photobacterium profundum 3TCK] gi|90328891|gb|EAS45175.1| putative ABC-type amino acid transport system, permease component [Photobacterium profundum 3TCK] Length = 365 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 102/195 (52%), Gaps = 6/195 (3%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDT-IISLIMHFYVWIFRGTPLLVQLF 75 L+ ++VTL IA + V+SL IG +A+ R S+ II I Y+ I+RG PL+ LF Sbjct: 154 LWGGLLVTLVIAIVGIVVSLPIGVALALGRR--SEMPIIRSICTVYIEIWRGVPLITVLF 211 Query: 76 VIFYGLPHI---GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTR 132 + LP + D +I + L +AY++E+IR + +IP+GQ++A+ A+GL+ Sbjct: 212 MASVLLPLFLTSEMEMDKLFRALIGVVLFSAAYMAEVIRGGLQAIPRGQYEAADALGLSY 271 Query: 133 KQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIY 192 +++ I+LPQ + + + + FI + K TS+ I + ++ Q S Sbjct: 272 WKSMYLIVLPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANSDPDWLGFAT 331 Query: 193 CELAFVYLILTSFCY 207 FV L+ FC+ Sbjct: 332 ESYIFVALVFWVFCF 346 >gi|299782729|gb|ADJ40727.1| Glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum CECT 5716] Length = 484 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 100/186 (53%), Gaps = 4/186 (2%) Query: 9 IIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIFRG 67 +I S L + + TL + + ++++ G + V+ I SD I S I ++IFRG Sbjct: 275 LIKSNKDALLSGLGETLLLTVVGVALAILFGVILGVMGI--SDRKIFSSISSVIIYIFRG 332 Query: 68 TPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASY 126 P++V F I+ G+P IG F A I++L L+ AY+ I++ ++ +GQW+A+ Sbjct: 333 MPMIVLAFFIYIGMPSVIGHKIPLFTAGILTLMLDEGAYVGAIVKGGFQAVDRGQWEAAR 392 Query: 127 AIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTY 186 ++GL +T+ +I+PQ I L ++ I LK TS+ S I + E+ QT I++ Sbjct: 393 SLGLPYYKTLVKVIMPQGIKIMVPSLVNQLIITLKDTSILSAIGVMELTQTGTVIIARNM 452 Query: 187 QPLIIY 192 + I+ Sbjct: 453 EGFKIW 458 >gi|269963237|ref|ZP_06177571.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3] gi|269832042|gb|EEZ86167.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3] Length = 306 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 88/155 (56%), Gaps = 9/155 (5%) Query: 65 FRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 +RG P VQ F F+G ++ +++ + ++ + L SAYI+E++R+ + S+ KGQW+A Sbjct: 154 YRGEPNAVQHF--FFGPANL---WENLASGVLCVGLLSSAYIAEVVRAGLQSVDKGQWEA 208 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++GL+R R II PQ + L+ + IS++K TS+ S I+I E+ + ++ Sbjct: 209 ADSLGLSRWVKYRFIIAPQVLKAITPALAGQTISLVKDTSIVSLISIQEMTFVGTEMANS 268 Query: 185 TYQPLIIYCELAFVYLI----LTSFCYIIQIKIES 215 + I+ + FVY + L+ F I+ K ES Sbjct: 269 SGYIFEIWLIVGFVYFLICFGLSMFFRYIEKKSES 303 >gi|262047371|ref|ZP_06020328.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-3A-US] gi|260572345|gb|EEX28908.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-3A-US] Length = 223 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 104/194 (53%), Gaps = 5/194 (2%) Query: 11 DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70 +F +L+ A + ++ IA +S +I L +G ++R + I ++ Y+ FR P Sbjct: 13 SNFARLM-AGLWTSIWIAALSLIIGLAVGTIFGILRTL-KNRPIRFVLRLYLEFFRIVPT 70 Query: 71 LVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129 +V L++++Y LP + + + + +++ ++ +A S+I+R ++ S+PK Q ++ A+G Sbjct: 71 VVLLYLVYYILPRSLHVNWPATWMAVLAFSMWVAAEFSDIVRGALESVPKTQRESGLALG 130 Query: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQ-- 187 L R Q R+++LPQ + + ++K+TS+ I I E+ Q+I+ Q Sbjct: 131 LNRLQLFRYVLLPQAVKLELPATINLATRVIKTTSLLMIINIMEVINVVQQIIEANNQQY 190 Query: 188 PLIIYCELAFVYLI 201 P ++ F++++ Sbjct: 191 PAGVFWVYGFIFIL 204 >gi|108799121|ref|YP_639318.1| amino acid ABC transporter permease [Mycobacterium sp. MCS] gi|119868236|ref|YP_938188.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium sp. KMS] gi|108769540|gb|ABG08262.1| amino acid ABC transporter membrane protein 1, PAAT family [Mycobacterium sp. MCS] gi|119694325|gb|ABL91398.1| amino acid ABC transporter membrane protein 1, PAAT family [Mycobacterium sp. KMS] Length = 226 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/199 (28%), Positives = 105/199 (52%), Gaps = 13/199 (6%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL-LVQLF 75 ++ A T+ + S V +LI+G +A +R+ ++S + YV + R TPL L+ LF Sbjct: 11 IFEAFWTTIQLTVYSAVGALILGTVLAGMRLS-PVPMLSWLGTAYVNVIRNTPLTLIILF 69 Query: 76 VIFYGLPHIGIVF-----------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDA 124 F +GI +F ++ LT+ ++++ E +RS + ++P GQ +A Sbjct: 70 CSFGVSQTLGITLVDPQSSTSIEDSNFRLAVLGLTVYTASFVCETVRSGVNTVPLGQAEA 129 Query: 125 SYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVST 184 + ++GLT Q +R I+LPQ + +PL S I++ K+T++AS I + E + ++ Sbjct: 130 ARSLGLTFSQNLRMILLPQAFRSVVIPLGSVLIALTKNTTIASAIGVAEAALLMKEMIEN 189 Query: 185 TYQPLIIYCELAFVYLILT 203 T L++ A ++ILT Sbjct: 190 TAALLVVGSIFALGFIILT 208 >gi|296162980|ref|ZP_06845757.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295886774|gb|EFG66615.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 225 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 93/173 (53%), Gaps = 9/173 (5%) Query: 17 LYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFV 76 L+ VVTL I I+ V +I G +A++R+ S YV IFR PL++ L Sbjct: 16 LWTGAVVTLKITVIAIVFGIIWGTVLAMLRLS-SFKPFEWFAKGYVTIFRSIPLVMVLLW 74 Query: 77 IFYGLPHI-----GIVFD---SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAI 128 F +P + G+ D + +++ +L +AY SEIIR+ I ++P+GQ +A++A+ Sbjct: 75 FFLIVPQVLQNVLGLSADIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFAL 134 Query: 129 GLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRI 181 G+ Q +R I+LPQ L ++ I + + TS+ I++ + F+TA I Sbjct: 135 GMNYAQAMRLIVLPQAFRAMVPLLLTQGIVLFQDTSLVYVISLADFFRTATNI 187 >gi|313106242|ref|ZP_07792491.1| putative amino acid ABC transporter permease [Pseudomonas aeruginosa 39016] gi|310878993|gb|EFQ37587.1| putative amino acid ABC transporter permease [Pseudomonas aeruginosa 39016] Length = 214 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 99/197 (50%), Gaps = 4/197 (2%) Query: 24 TLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH 83 TL I ++ +I ++G ++R SL + + +FR PLL+Q FV+ Sbjct: 21 TLAITAMAMLIGTLLGVVFGLLRALLPRA--SLPLAALLDVFRSVPLLIQ-FVLLNSFKS 77 Query: 84 I-GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILP 142 I G+ + +F + L + +AY +E++R + S+P A+ ++GL+ +Q + HI+LP Sbjct: 78 ILGLDWSAFAVACLVLGVYAAAYCTEVVRGGVFSVPPSVRRAARSLGLSYRQDLFHIVLP 137 Query: 143 QTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLIL 202 + + +S++K TS+ I I E+ + +Q IV+ +PL + C VY ++ Sbjct: 138 MAARVAFPGWVNLTLSVMKDTSLVLWIGIVELLRASQTIVTRIQEPLFVLCIAGLVYYLM 197 Query: 203 TSFCYIIQIKIESSVTQ 219 + + ++E Q Sbjct: 198 SWVVARLGARLERRWQQ 214 >gi|297156743|gb|ADI06455.1| putative glutamate ABC transporter permease protein [Streptomyces bingchenggensis BCW-1] Length = 313 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/174 (30%), Positives = 96/174 (55%), Gaps = 9/174 (5%) Query: 19 AAIVVTLPIACISFVISLIIGFFIAVIRIFFSD-TIISLIMHFYVWIFRGTPLLV---QL 74 + ++ TL + ++ V+SL +G +AV R+ SD + L ++ +FR PLL+ L Sbjct: 65 SGLLTTLQVFAVAAVLSLALGVVLAVGRL--SDHKWVRLFTTGFIELFRAVPLLITIYAL 122 Query: 75 FVIFYGLPH-IGIVFDS--FVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLT 131 +V+F + +G D F A+++ LT+ + +E++R+ I S+PKGQ +A+YA+G+ Sbjct: 123 WVLFLTYKNDLGFTGDGTEFWALVVGLTIYNGSVQAEVLRAGINSVPKGQSEAAYALGMR 182 Query: 132 RKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTT 185 + Q + I++PQ + + S+ + LK TS+ IT E+ Q I T Sbjct: 183 KTQVMVTILIPQGVRAMLPTIISQLVVTLKDTSLGYVITYQELLYKVQHIAEVT 236 >gi|134288196|ref|YP_001110359.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia vietnamiensis G4] gi|134132846|gb|ABO59556.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia vietnamiensis G4] Length = 237 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 97/186 (52%), Gaps = 20/186 (10%) Query: 33 VISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVF- 88 V S+ IGF ++V + S+ + + F+ ++FRGTPL +QL + + G+ + +V Sbjct: 31 VASVAIGFVMSVPLSVARVSSNPFVRGPVWFFTYVFRGTPLYIQLLIFYSGIYSLNVVRS 90 Query: 89 ---------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHI 139 + I++L LN AY +EI +I SIP G+ +A+ A G++ I Sbjct: 91 HELLDRVFREGINCTILALALNTCAYTTEIFAGAIKSIPYGEIEAARAFGMSPWVLYTRI 150 Query: 140 ILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL-------IIY 192 I+P + + S+E I +L +T++A T T+P+I + A+ + S TY ++Y Sbjct: 151 IIPSALRRALPYYSNEVILMLHATTLAFTATVPDILKVARDVNSATYASFEAFGIAAVLY 210 Query: 193 CELAFV 198 +AFV Sbjct: 211 ACIAFV 216 >gi|167043000|gb|ABZ07713.1| putative binding-protein-dependent transport system inner membrane component [uncultured marine microorganism HF4000_ANIW137P11] Length = 684 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 22/165 (13%) Query: 61 YVWIFRGTPLLVQLFVIFYGLP--------HIGIVFD--------------SFVAIIISL 98 Y FR TPL+VQ I +G+ + G D +F++ I +L Sbjct: 495 YTDFFRNTPLIVQFMFIHFGVGIGLKIQKAYEGNFGDMGTDGLDYFFFGQSAFISAIFTL 554 Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158 LN AY E IR +I +IP GQ +A +IGLT T+R +ILPQ I PL +E ++ Sbjct: 555 GLNSGAYQCETIRGAIAAIPTGQMEAGRSIGLTYMGTMRLVILPQAIRICIPPLGNEMVN 614 Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 ++ ++S+A I E+ + + I++ T+Q + + Y ++T Sbjct: 615 LVLNSSLAMVIGYSELARQGRLIIAVTFQIFWAWGMVMISYFVIT 659 >gi|317123398|ref|YP_004097510.1| amino acid ABC transporter permease [Intrasporangium calvum DSM 43043] gi|315587486|gb|ADU46783.1| amino acid ABC transporter membrane protein, PAAT family [Intrasporangium calvum DSM 43043] Length = 333 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 38/243 (15%) Query: 8 LIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRG 67 L I +F +L + TL + V+ ++ G IAV+R+ ++ ++ + + W FR Sbjct: 62 LRIMNFNPVLEGLLKGTLLGTAGAMVLGVVFGVAIAVMRLS-ANPVLRGVSFVFTWFFRA 120 Query: 68 TP---LLVQLFVIFY-------GLP-------------------------HIGIVFDSFV 92 P LLV + I Y GLP GI F+ Sbjct: 121 IPRYVLLVMMGSIGYLYPDLALGLPFGQQLAESLGWGTDLTFATVDVNRFSTGISTGIFL 180 Query: 93 AIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPL 152 II L L+ +AY++EI R+ I+S+ KGQ +A+ A+G++ +T+R I+LPQ + P Sbjct: 181 GII-GLGLSEAAYMAEIARAGILSVDKGQAEAAQALGMSSGKTMRRIVLPQAMRVIVPPT 239 Query: 153 SSEFISILKSTSVASTITIP-EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211 +E I+++K TS+ + I + E+F + I + T Q + YLI+ S + Q Sbjct: 240 GNETIAMVKDTSLLTAIPVQMELFNQTRIIGTRTLQIMPSLVAAVGWYLIVCSVLMVGQY 299 Query: 212 KIE 214 +E Sbjct: 300 YLE 302 >gi|330954115|gb|EGH54375.1| glutamine ABC transporter, permease protein [Pseudomonas syringae Cit 7] Length = 246 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 86/149 (57%), Gaps = 5/149 (3%) Query: 61 YVWIFRGTPLLVQLFVIFYGLPH-IGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPK 119 +V++ RG PLL+ +F ++ +P IG F ++ +L + S Y+ EIIR +I ++P Sbjct: 67 WVYVMRGIPLLMVIFWTYFLVPLLIGHNITGFTTMLCTLVVYQSVYLCEIIRGAIQALPT 126 Query: 120 GQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQ 179 GQ++AS A+G+ +T +ILPQ + + L S+FISI+K TS+ I + E+ A Sbjct: 127 GQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINVQEVTFAAN 186 Query: 180 RIVSTTY-QPLIIYCELAFVYLILTSFCY 207 +I + +P ++ LA Y +L CY Sbjct: 187 QINNQLLTKPFQVFFILAITYYVL---CY 212 >gi|330815543|ref|YP_004359248.1| Glutamate/aspartate transport system permease protein [Burkholderia gladioli BSR3] gi|327367936|gb|AEA59292.1| Glutamate/aspartate transport system permease protein [Burkholderia gladioli BSR3] Length = 225 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 102/188 (54%), Gaps = 11/188 (5%) Query: 2 KYEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFY 61 ++W I + P L AIV TL I ++ V+ ++ G +A++R+ + Y Sbjct: 3 DFDWSG-IPGALPSLWTGAIV-TLQITLLAIVVGIVWGTLLALMRLSGVKPL-QWFSRLY 59 Query: 62 VWIFRGTPLLVQLFVIFYGLPHI--GIVFDS------FVAIIISLTLNFSAYISEIIRSS 113 V +FR PL++ L F +P + G++ S + +I+ +L +AY SEIIR+ Sbjct: 60 VTVFRSIPLVMVLLWFFLIVPQVLQGVLGLSPTIDIRLASAMIAFSLFEAAYYSEIIRAG 119 Query: 114 IISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 I ++P+GQ +A++A+G++ Q +R +ILPQ L ++ I + + TS+ I++ + Sbjct: 120 IQAVPRGQVNAAFALGMSYGQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYVISLAD 17