RPSBLAST alignment for GI: 254781113 and conserved domain: pfam00528
>gnl|CDD|144205 pfam00528, BPD_transp_1, Binding-protein-dependent transport system inner membrane component. The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices. Length = 183
Score = 54.2 bits (131), Expect = 3e-08
Identities = 32/173 (18%), Positives = 63/173 (36%), Gaps = 1/173 (0%)
Query: 39 GFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAIIISL 98
G + +I + ++ + + + P V ++ + + I+ + II
Sbjct: 1 GIPLGIIAALRRGRRLDRLLRPLIDLLQALPSFVLAILLVV-ISILSILGHGILPAIILA 59
Query: 99 TLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158
L ++ Y I R+++ S+P +A+ A+G +R Q R IILP + L+ F
Sbjct: 60 LLGWAGYARLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGG 119
Query: 159 ILKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQI 211
L + + Y I + LIL ++ I
Sbjct: 120 ALGGAVLLEFLGSWPGLGLLLIEAILGYDYPEIQGPVLAAALILLLLNLLVDI 172