HHsearch alignment for GI: 254781114 and conserved domain: pfam03213
>pfam03213 Pox_P35 Poxvirus P35 protein.
Probab=98.15 E-value=2.1e-05 Score=50.24 Aligned_cols=103 Identities=17% Similarity=0.150 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHH-----HHCCCCEEEEEEECCCCCCCHHHHHHHH--HHCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999999999-----8279985999730221330089999999--84155377544511366542221123467770
Q gi|254781114|r 68 GCYISHIHLWKRI-----AYSPAIGAIILEDDADFSDEFSQLLPHL--SKCDINNILIKFDALRKKPKKDSYLCTLPGNF 140 (263)
Q Consensus 68 gC~lSH~~~w~~~-----~~~~~~~~lIlEDD~~~~~~f~~~l~~~--~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~ 140 (263)
T Consensus 97 ~sia~H~SLWe~~~~~~~~~~~~~fivVvEdDnTl~~--it~i~~~I~~M~~knidilQLrE~~~~~-~~rt~~~~~~~p 173 (325)
T pfam03213 97 RSIANHLSLWESYAKADIKDPESKFIVVVEDDNTLRD--ITTIHPLIKSMKEKNIDILQLRETLHNN-NVRTLLNQSGNP 173 (325)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCC--CHHHHHHHHHHHHCCCEEEEEHHHHHCC-CHHHHCCCCCCC
T ss_conf 9999888999987334545877656999937972135--3769999999986595487512355033-244423566896
Q ss_pred EEEEEC-CCCCCCEEEEECHHHHHHHHHHHCCCC
Q ss_conf 589940-579851235666999999999625457
Q gi|254781114|r 141 DIHQPR-ILSPRTTGYFIGKEAAIHLLNVRKNIY 173 (263)
Q Consensus 141 ~l~~~~-~~~~gt~aY~Is~~~AkkLl~~~~~~~ 173 (263)
T Consensus 174 ~l~~YtGgyDvSLsAYIIr~~ta~kl~~~i~~~~ 207 (325)
T pfam03213 174 SLYSYTGGYDVSLSAYIIRVSTAKKLYAEIIKNG 207 (325)
T ss_pred CEEEECCCCCEEEEEEEEEHHHHHHHHHHHHHCC
T ss_conf 4266337532267899997278899999998658