HHsearch results for GI: 254781114 and protein with PDBid: 1fo8_A
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=97.93 E-value=0.00083 Score=39.82 Aligned_cols=189 Identities=12% Similarity=0.042 Sum_probs=95.2
Q ss_pred CC-CCEEEEECCCCHHHHHHHHHHHHHC-CC-CEEEEECCCCCCCCHHHH--HHCCHHC------CCCCCCCCCHHHHHH
Q ss_conf 98-8689980899889999999999877-99-789996637352896774--2020000------246788788789999
Q gi|254781114|r 1 MP-IPVYVISLPFSHARREKFCHRAARI-HL-QFSFFDAIYGENNPICNR--IFSHQKR------QCQFKRLLSLPEIGC 69 (263)
Q Consensus 1 m~-~kiyvInL~~~~~Rr~~~~~~~~~~-gi-~~e~~~Avdg~~~~~~~~--~~~~~~~------~~~~~~~l~~geigC 69 (263)
|+ +||-||.-.|- +=+..+...++.. +. ++..+=..||......+. .+..... ...........+.+|
T Consensus 1 ~~viPVlvia~NRp-~l~r~L~sLlk~~p~~~~~~LiVs~DG~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~~k~~~ 79 (343)
T 1fo8_A 1 LAVIPILVIACDRS-TVRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGSAVTHIRQPDLSNIAVQPDHRKFQG 79 (343)
T ss_dssp CCCCCEEEEESSCT-THHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGGGSEEEECSCCCCCCCCTTCGGGHH
T ss_pred CCEEEEEEEECCCH-HHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHEECCCCCCCEECHHHHCCCC
T ss_conf 97042999976706-89999999996574678832999973895678999998777653101477677511301313440
Q ss_pred HH---HHHH-HHHHHHH-CCCCEEEEEEECCCCCCCHHHHHHHHHHC-CCCCCEEEEECCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 99---9999-9999982-79985999730221330089999999841-55377544511366542221123467770589
Q gi|254781114|r 70 YI---SHIH-LWKRIAY-SPAIGAIILEDDADFSDEFSQLLPHLSKC-DINNILIKFDALRKKPKKDSYLCTLPGNFDIH 143 (263)
Q Consensus 70 ~l---SH~~-~w~~~~~-~~~~~~lIlEDD~~~~~~f~~~l~~~~~~-~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~l~ 143 (263)
+. .|+. +..++-+ .+.+.++|||||.++.++|.++.+..... ..|-.+....+..-.. ............++
T Consensus 80 ~~~i~~hy~~aLn~~F~~~~~~~vIilEDDl~~spdF~~~~~~~l~~~~~d~~i~~Isa~n~ng--~~~~~~~~~~~~ly 157 (343)
T 1fo8_A 80 YYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAWNDNG--KEQMVDSSKPELLY 157 (343)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESCCTTC--BGGGSCTTCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEECHHHHHHHHHHHHHHHCCCCEEEEECCCCCC--CCCCCCCCCCCEEE
T ss_conf 0779989999999987642787699982770351789999999999986189879995766778--65556678855499
Q ss_pred EECCCCCCCEEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 940579851235666999999999625457804688799997598179996031
Q gi|254781114|r 144 QPRILSPRTTGYFIGKEAAIHLLNVRKNIYRPIDMDMKHWWEHNIPSLVTEPGA 197 (263)
Q Consensus 144 ~~~~~~~gt~aY~Is~~~AkkLl~~~~~~~~pvD~~l~~~~~~~l~~~~~~P~~ 197 (263)
+...+ .+-|++++++.=+.+-.. .| ..-.|.||.....++-+ +.+.|-+
T Consensus 158 rs~~f--pgwGW~~~r~~W~e~~~k-w~-~~~wd~w~r~~~~rk~r-~cI~Pev 206 (343)
T 1fo8_A 158 RTDFF--PGLGWLLLAELWAELEPK-WP-KAFWDDWMRRPEQRKGR-ACVRPEI 206 (343)
T ss_dssp EESSC--CCSSEEEEHHHHHHHGGG-CC-SSCHHHHHTSHHHHTTC-EEEEESS
T ss_pred EECCC--CCHHHHHHHHHHHHHCCC-CC-CCCCHHHHHHHHHHCCC-EEEECCC
T ss_conf 81588--831201229899874424-66-65545888748873698-7886465