HHsearch results for GI: 254781114 and protein with PDBid: 1fo8_A

>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=97.93  E-value=0.00083  Score=39.82  Aligned_cols=189  Identities=12%  Similarity=0.042  Sum_probs=95.2

Q ss_pred             CC-CCEEEEECCCCHHHHHHHHHHHHHC-CC-CEEEEECCCCCCCCHHHH--HHCCHHC------CCCCCCCCCHHHHHH
Q ss_conf             98-8689980899889999999999877-99-789996637352896774--2020000------246788788789999
Q gi|254781114|r    1 MP-IPVYVISLPFSHARREKFCHRAARI-HL-QFSFFDAIYGENNPICNR--IFSHQKR------QCQFKRLLSLPEIGC   69 (263)
Q Consensus         1 m~-~kiyvInL~~~~~Rr~~~~~~~~~~-gi-~~e~~~Avdg~~~~~~~~--~~~~~~~------~~~~~~~l~~geigC   69 (263)
                      |+ +||-||.-.|- +=+..+...++.. +. ++..+=..||......+.  .+.....      ...........+.+|
T Consensus         1 ~~viPVlvia~NRp-~l~r~L~sLlk~~p~~~~~~LiVs~DG~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~~k~~~   79 (343)
T 1fo8_A            1 LAVIPILVIACDRS-TVRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGSAVTHIRQPDLSNIAVQPDHRKFQG   79 (343)
T ss_dssp             CCCCCEEEEESSCT-THHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGGGSEEEECSCCCCCCCCTTCGGGHH
T ss_pred             CCEEEEEEEECCCH-HHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHEECCCCCCCEECHHHHCCCC
T ss_conf             97042999976706-89999999996574678832999973895678999998777653101477677511301313440


Q ss_pred             HH---HHHH-HHHHHHH-CCCCEEEEEEECCCCCCCHHHHHHHHHHC-CCCCCEEEEECCCCCCCCCCCCCCCCCCCEEE
Q ss_conf             99---9999-9999982-79985999730221330089999999841-55377544511366542221123467770589
Q gi|254781114|r   70 YI---SHIH-LWKRIAY-SPAIGAIILEDDADFSDEFSQLLPHLSKC-DINNILIKFDALRKKPKKDSYLCTLPGNFDIH  143 (263)
Q Consensus        70 ~l---SH~~-~w~~~~~-~~~~~~lIlEDD~~~~~~f~~~l~~~~~~-~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~l~  143 (263)
                      +.   .|+. +..++-+ .+.+.++|||||.++.++|.++.+..... ..|-.+....+..-..  ............++
T Consensus        80 ~~~i~~hy~~aLn~~F~~~~~~~vIilEDDl~~spdF~~~~~~~l~~~~~d~~i~~Isa~n~ng--~~~~~~~~~~~~ly  157 (343)
T 1fo8_A           80 YYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAWNDNG--KEQMVDSSKPELLY  157 (343)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESCCTTC--BGGGSCTTCTTCEE
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEECHHHHHHHHHHHHHHHCCCCEEEEECCCCCC--CCCCCCCCCCCEEE
T ss_conf             0779989999999987642787699982770351789999999999986189879995766778--65556678855499


Q ss_pred             EECCCCCCCEEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             940579851235666999999999625457804688799997598179996031
Q gi|254781114|r  144 QPRILSPRTTGYFIGKEAAIHLLNVRKNIYRPIDMDMKHWWEHNIPSLVTEPGA  197 (263)
Q Consensus       144 ~~~~~~~gt~aY~Is~~~AkkLl~~~~~~~~pvD~~l~~~~~~~l~~~~~~P~~  197 (263)
                      +...+  .+-|++++++.=+.+-.. .| ..-.|.||.....++-+ +.+.|-+
T Consensus       158 rs~~f--pgwGW~~~r~~W~e~~~k-w~-~~~wd~w~r~~~~rk~r-~cI~Pev  206 (343)
T 1fo8_A          158 RTDFF--PGLGWLLLAELWAELEPK-WP-KAFWDDWMRRPEQRKGR-ACVRPEI  206 (343)
T ss_dssp             EESSC--CCSSEEEEHHHHHHHGGG-CC-SSCHHHHHTSHHHHTTC-EEEEESS
T ss_pred             EECCC--CCHHHHHHHHHHHHHCCC-CC-CCCCHHHHHHHHHHCCC-EEEECCC
T ss_conf             81588--831201229899874424-66-65545888748873698-7886465