HHsearch results for GI: 254781114 and protein with PDBid: 2j0a_A
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic fringe; glycosyltransferase, developmental protein, transmembrane, golgi apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=97.24 E-value=0.0039 Score=35.97 Aligned_cols=120 Identities=11% Similarity=0.018 Sum_probs=61.5
Q ss_pred HHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEE
Q ss_conf 99998279985999730221330089999999841553775445113665422211234677705899405798512356
Q gi|254781114|r 77 WKRIAYSPAIGAIILEDDADFSDEFSQLLPHLSKCDINNILIKFDALRKKPKKDSYLCTLPGNFDIHQPRILSPRTTGYF 156 (263)
Q Consensus 77 w~~~~~~~~~~~lIlEDD~~~~~~f~~~l~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gt~aY~ 156 (263)
+.+....+.++.+..+||..+.. ...+..+......-+ ++++.................... ........|.+||+
T Consensus 86 ~~~~~~~~~kW~~~~DDDtyv~~--~~L~~~L~~~~~~~~-~y~G~~~~~~p~~~~~~~~~~~~~-~~~~~~~~GGaG~v 161 (280)
T 2j0a_A 86 FDAFLVSGLRWFCHVDDDNYVNP--KALLQLLKTFPQDRD-VYVGKPSLNRPIHASELQSKQRTK-LVRFWFATGGAGFC 161 (280)
T ss_dssp HHHHHHHTCSEEEEEETTEEECH--HHHHHHHTTSCTTSC-CEEECEEC--------------------CCEECGGGCEE
T ss_pred HHHHHCCCCCEEEEECCCCCCCH--HHHHHHHHHCCCCCC-EEECCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCEEEE
T ss_conf 99973888756999537503049--999999974699998-783577667765333345521156-65666678871799
Q ss_pred ECHHHHHHHHHHHC---------CCCCHHHHHHHHHHHCCCCEEEEECCCEEC
Q ss_conf 66999999999625---------457804688799997598179996031312
Q gi|254781114|r 157 IGKEAAIHLLNVRK---------NIYRPIDMDMKHWWEHNIPSLVTEPGAVYE 200 (263)
Q Consensus 157 Is~~~AkkLl~~~~---------~~~~pvD~~l~~~~~~~l~~~~~~P~~v~~ 200 (263)
+|+..|++|...+. .+..|-|++++.-.++.+.+-.+.-+.-.+
T Consensus 162 lSr~l~~kl~~~~~~~~~~~~~~~~~~pDDv~lG~cl~~~LGi~lth~~~FHs 214 (280)
T 2j0a_A 162 INRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHS 214 (280)
T ss_dssp EEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCC
T ss_pred ECHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 86999999999855777422335589903774599999506998654755120