HHsearch alignment for GI: 254781115 and conserved domain: PRK03381
>PRK03381 PII uridylyl-transferase; Provisional.
Probab=99.12 E-value=1.3e-10 Score=90.55 Aligned_cols=187 Identities=13% Similarity=0.044 Sum_probs=129.0
Q ss_pred HHHCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCC-CCHHHHHHHHHHCCCCCCCCCC
Q ss_conf 001042100332012201364331111000123333210222057768878864211-0189999987530023346887
Q gi|254781115|r 159 RILEDYLRILRFFRFFAHYGEKNIDSDGLVASIKAKKGLKILSSERIWSEINKLLEA-KNPLNAIVHMYNGGIFKEIFLD 237 (416)
Q Consensus 159 rf~EDpLRiLRa~RFasrlg~f~id~~t~~ai~~~~~~L~~iS~ERI~~El~KiL~~-~~~~~~l~~L~~~gll~~ifpe 237 (416)
T Consensus 326 ~~~~dp~~~Lr~~~~a~~~~-l~i~~~t~~~l~~~~~~l~~~~~~~~~~~f~~il~~~~~~~~~l~~m~~~GvL~~~iPe 404 (781)
T PRK03381 326 RPERDPGLVLRVAAAAATTG-LPLAAATLSRLAATAPPLPTPWPAEARDDLLVLLGAGPAAVAVIEALDRTGLWGRLLPE 404 (781)
T ss_pred CHHHCHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHCHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCC
T ss_conf 52139799999999963528-87699999999984721256788999999999974899658999998760868775864
Q ss_pred CCCCCH------------HHH--HHHHHHHHH-CCCCCCHHHHHHHHCCCCCH-----------HHHHHHHHHCCCHHHH
Q ss_conf 010585------------789--877867763-17880167666520477685-----------7899887530342567
Q gi|254781115|r 238 VQEISL------------DQL--SQVIEAEQV-FEWKIDSLLRFIVLISWQDK-----------KSILSMAKKFSLPREI 291 (416)
Q Consensus 238 l~~~~~------------~~l--~~~~~~~~~-~~~~~~~~lrla~Ll~~~~~-----------~~~~~~~~rlkl~~~~ 291 (416)
T Consensus 405 f~~i~~~~Q~D~yH~YTVD~H~l~~~~~a~~l~~~v~~p~lL~lAaLlHDIGKGrggDHS~~Ga~~a~~~~~rlgl~~~d 484 (781)
T PRK03381 405 WEAVRDLPQRDVVHRWTVDRHLVETAVRAAALTRRVARPDLLLLGALLHDIGKGRGGDHSVAGAELARQIGTRLGLWPSD 484 (781)
T ss_pred HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 45320676776450155216899999999999862653589999998606621578864667599999999986999899
Q ss_pred HHHHHHHHHHHCCCCC-------CCHHHHHHHHHHCCC-HHHHHHHHHHHHHHCCCCCCCCHH
Q ss_conf 7778888754114333-------672466789987080-245516989998640777601389
Q gi|254781115|r 292 RYFLISFFNCNFNQKT-------LSIPEIKKLFYLYGD-KVMIAKLKIFLALHYNNLTHQDTC 346 (416)
Q Consensus 292 ~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~ 346 (416)
T Consensus 485 ~~~v~~LV~~HLlMs~tAqRrDi~DP~vI~~FA~~Vgs~~~~L~~LylLTvADi~ATgP~~Wn 547 (781)
T PRK03381 485 VDLLSKLVRHHLLLPETATRRDLDDPATIEAVAEALGGDPQLLELLHALTEADSLATGPGVWS 547 (781)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf 999999999999899999763789879999999996544999999887760521056963006