HHsearch alignment for GI: 254781115 and conserved domain: PRK10885
>PRK10885 cca multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase; Reviewed.
Probab=100.00 E-value=0 Score=496.55 Aligned_cols=348 Identities=22% Similarity=0.336 Sum_probs=260.5
Q ss_pred EEEEEHHHHHHHHCCCCCCEEEE-EEECCHHHHHHHHHHCCCCEECCCCCCCEEEEEECCEEEEEECCCCCCCCC-CCCC
Q ss_conf 59997069988877889860899-980898999999987699562134314469999899888642134466768-8743
Q gi|254781115|r 28 KSCIVGGAVRDSLMNLSVQDIDI-ATTILPDRVMRIFSKTRYKVIPTSISYGTIKIICRKKYFDITTLRSDLITD-GRYA 105 (416)
Q Consensus 28 ~~~~VGG~VRD~ll~~~~~DiD~-~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~~~di~~~R~e~~~~-~~~~ 105 (416)
T Consensus 2 ~~ylVGGaVRD~LLg~~~~D~D~vv~ga~pe~~~~~----g~~--~vG~~f~v~--l~~~~~~e~alarterk~~~g~~g 73 (410)
T PRK10885 2 KIYLVGGAVRDALLGLPVKDRDWVVVGATPEEMLAQ----GYQ--PVGKDFPVF--LHPKTHEEYALARTERKSGRGYTG 73 (410)
T ss_pred CEEEEEEHHHHHHCCCCCCCEEEECCCCCHHHHHHC----CCC--EECCCCEEE--EECCCCEEEEEEEEEEECCCCCCC
T ss_conf 789972099899769899886785789999999980----883--107632179--867887189999888604667575
Q ss_pred CCCCCH---HHHHHCCCCCCCCCCEEECCCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEEEECC---CC
Q ss_conf 223320---133210447800300200032101320000688878777642764310010421003320122013---64
Q gi|254781115|r 106 KVVFTR---DWKADSLRRDFTINALYADQQGKVIDYVGGLNDLRNRTIKFIGDAHHRILEDYLRILRFFRFFAHY---GE 179 (416)
Q Consensus 106 ~~~~~~---~~~eDl~RRDFTINAla~~~~~~l~Dp~gG~~DL~~~~ir~v~~~~~rf~EDpLRiLRa~RFasrl---g~ 179 (416)
T Consensus 74 ~~~~~~p~vtleeDl~RRDfTINAmA~d~~g~liDp~~G~~DL~~~ilR~v~~~---F~EDpLRilRa~RFaar~~~lg- 149 (410)
T PRK10885 74 FTCYAAPDVTLEEDLIRRDLTINAMAQDDDGEIIDPYGGQRDLEARLLRHVSPA---FAEDPLRVLRVARFAARFAHLG- 149 (410)
T ss_pred EEEECCCCCCHHHHHHHCCCCEEEEEECCCCCEEECCCCHHHHHCCCCCCCCCC---CCCCHHHHHHHHHHHHHHCCCC-
T ss_conf 377248987778887633776000006799998627998588974951055533---3217699999999998524389-
Q ss_pred CCCCCCCHHHHHHHHH--HCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH-----------HHH
Q ss_conf 3311110001233332--102220577688788642110189999987530023346887010585-----------789
Q gi|254781115|r 180 KNIDSDGLVASIKAKK--GLKILSSERIWSEINKLLEAKNPLNAIVHMYNGGIFKEIFLDVQEISL-----------DQL 246 (416)
Q Consensus 180 f~id~~t~~ai~~~~~--~L~~iS~ERI~~El~KiL~~~~~~~~l~~L~~~gll~~ifpel~~~~~-----------~~l 246 (416)
T Consensus 150 F~i~~eT~~~m~~~~~~g~L~~ls~ERi~~E~~k~l~~~~p~~~~~~L~~~g~l~~~~PEl~~l~gv~q~~~~H~e~d~~ 229 (410)
T PRK10885 150 FRIAPETLALMREMVASGELDALTPERVWKETERALMERNPQVFFQVLRDCGALAVLLPEIDALFGVPQPAKWHPEIDTG 229 (410)
T ss_pred CCCCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHH
T ss_conf 96784699999997835713226876689999999768888999999998568888624189864998862358764379
Q ss_pred HHHHHH-HHHCCCCCCHHHHHHHHCCCCCHH-------------------HHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 877867-763178801676665204776857-------------------899887530342567777888875411433
Q gi|254781115|r 247 SQVIEA-EQVFEWKIDSLLRFIVLISWQDKK-------------------SILSMAKKFSLPREIRYFLISFFNCNFNQK 306 (416)
Q Consensus 247 ~~~~~~-~~~~~~~~~~~lrla~Ll~~~~~~-------------------~~~~~~~rlkl~~~~~~~l~~~~~~~~~~~ 306 (416)
T Consensus 230 ~Htl~~l~~a~~~~~~~~~r~aaL~HDlgK~~t~~~~~~~~~gh~~~g~~~~~~l~~RLk~Pn~~~~la~l~~~~H~~~~ 309 (410)
T PRK10885 230 IHTLMVLDQAAKLSPSLDVRFAALCHDLGKGLTPPEEWPRHHGHEPRGVKLVEQLCQRLRVPNECRDLALLVAEEHDNIH 309 (410)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998549988999999974632668973436531113321059999999995899999999999999999874
Q ss_pred C---CCHHHHHHHHHHCCC---HHHHHHHHHHHHH-HCC--CCCC---CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC
Q ss_conf 3---672466789987080---2455169899986-407--7760---13899999998775128888898878999658
Q gi|254781115|r 307 T---LSIPEIKKLFYLYGD---KVMIAKLKIFLAL-HYN--NLTH---QDTCFILQVLSDIIHWKKPLFPLTGDDVVKYG 374 (416)
Q Consensus 307 ~---~~~~~~~~~~~~~~~---~~~~~~l~~~~~~-~~~--~~~~---~~~~~~~~~l~~~~~~~~p~~pI~G~dL~~~G 374 (416)
T Consensus 310 ~~~~l~~~~ll~ll~~~Da~RrPerf~~~L~~c~ad~~gr~~~e~~~ypq~~~L~~a~~~a~-------~V~~~~ii~~G 382 (410)
T PRK10885 310 RAPELRPKTLVKLLDRIDAWRKPQRFEQFLLACEADARGRLGFEDRPYPQAEYLREALQAAR-------SVDVKAVVEAG 382 (410)
T ss_pred CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH-------CCCHHHHHHCC
T ss_conf 11537999999999975864587999999998655553136754476639999999999996-------89999998768
Q ss_pred CCCCHHHHHHHHHHHHHHHCC
Q ss_conf 987779999999999999638
Q gi|254781115|r 375 IPPGKKVGNILVHCKQEWINS 395 (416)
Q Consensus 375 i~pGp~iG~iL~~l~~~~i~~ 395 (416)
T Consensus 383 ~~-G~~Ig~aL~~~Ri~ai~~ 402 (410)
T PRK10885 383 FK-GAAIREELTRRRIAAVAA 402 (410)
T ss_pred CC-HHHHHHHHHHHHHHHHHH
T ss_conf 98-589999999999999999