HHsearch alignment of GI: 254781115 and MMDB domain: 1miw_A_139-242
>1miw_A (A:139-242) TRNA CCA-adding enzyme; tRNA nucleotidyltransferase, translation, transferase; HET: ATP; 3.00A {Geobacillus stearothermophilus}
Probab=99.81 E-value=1.9e-21 Score=162.73 Aligned_cols=92 Identities=27% Similarity=0.318 Sum_probs=85.9
Q ss_pred HHHHHCCCCCCHHHCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 77764276431001042100332012201364331111000123333210222057768878864211018999998753
Q gi|254781115|r 148 RTIKFIGDAHHRILEDYLRILRFFRFFAHYGEKNIDSDGLVASIKAKKGLKILSSERIWSEINKLLEAKNPLNAIVHMYN 227 (416)
Q Consensus 148 ~~ir~v~~~~~rf~EDpLRiLRa~RFasrlg~f~id~~t~~ai~~~~~~L~~iS~ERI~~El~KiL~~~~~~~~l~~L~~ 227 (416)
|+||++|+|.++|.|||+|||||+||+++|| |.++++|..+|+++++.+..+|+|||+.|+.||+.++++..++..|.+
T Consensus 1 r~iR~~~~~~~~f~eDPlRiLR~~Rfaa~~~-f~i~~~t~~~i~~~~~~i~~v~~eRi~~El~kll~~~~~~~~l~~l~~ 79 (104)
T 1miw_A 1 RIIRTVGEAEKRFREDALRXXRAVRFVSELG-FALAPDTEQAIVQNAPLLAHISVERXTXEXEKLLGGPFAARALPLLAE 79 (104)
T ss_dssp TEECBSSCHHHHHHHCTHHHHHHHHHHHHHC-CEECHHHHHHHHHHGGGGGGSCHHHHHHHHHHHHTSSSHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 6024457756663032899999999986169-864621556542122211578888999999999765579999999998
Q ss_pred CCCCCCCCCCCCCC
Q ss_conf 00233468870105
Q gi|254781115|r 228 GGIFKEIFLDVQEI 241 (416)
Q Consensus 228 ~gll~~ifpel~~~ 241 (416)
+|+++.++ ++...
T Consensus 80 ~g~l~~lp-e~~~~ 92 (104)
T 1miw_A 80 TGLNAYLP-GLAGK 92 (104)
T ss_dssp STTTTSST-TCSSC
T ss_pred CCCHHHCC-CCCCH
T ss_conf 49686382-73210