HHsearch alignment of GI: 254781115 and MMDB domain: 3h38_A_161-247
>3h38_A (A:161-247) TRNA nucleotidyl transferase-related protein; transferase/RNA, nucleotide-binding, RNA-binding; 2.37A {Thermotoga maritima} PDB: 3h37_A 3h39_A* 3h3a_A*
Probab=99.76 E-value=3.5e-20 Score=154.23 Aligned_cols=85 Identities=28% Similarity=0.398 Sum_probs=79.0
Q ss_pred HHHHHCCCCCCHHHCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHH--HCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 777642764310010421003320122013643311110001233332--102220577688788642110189999987
Q gi|254781115|r 148 RTIKFIGDAHHRILEDYLRILRFFRFFAHYGEKNIDSDGLVASIKAKK--GLKILSSERIWSEINKLLEAKNPLNAIVHM 225 (416)
Q Consensus 148 ~~ir~v~~~~~rf~EDpLRiLRa~RFasrlg~f~id~~t~~ai~~~~~--~L~~iS~ERI~~El~KiL~~~~~~~~l~~L 225 (416)
|+||++|++ +|.|||+|||||+||+++|| |.++++|..+|++.++ .++.+|+|||+.|+.||+.+++|..++..|
T Consensus 1 G~lr~~~~~--~f~eDPlRilRa~Rfaarlg-f~i~~~t~~~i~~~~~~~~l~~is~eRi~~El~kll~~~~~~~~l~~l 77 (87)
T 3h38_A 1 GVIRVLHTL--SFVDDPTRILRAIRFEQRFD-FRIEETTERLLKQAVEEGYLERTTGPRLRQELEKILEEKNPLKSIRRM 77 (87)
T ss_dssp TEECBSSTT--HHHHCTTHHHHHHHHHHHTT-CEECHHHHHHHHHHHHTTHHHHSCHHHHHHHHHHHHTSSCHHHHHHHH
T ss_pred HHHHHHHHH--HHHHCCHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 665422467--77625078899999976214-565504667888863012111355088999999876313378999999
Q ss_pred HHCCCCCCCC
Q ss_conf 5300233468
Q gi|254781115|r 226 YNGGIFKEIF 235 (416)
Q Consensus 226 ~~~gll~~if 235 (416)
.++|++..+|
T Consensus 78 ~~~gll~~~f 87 (87)
T 3h38_A 78 AQFDVIKHLF 87 (87)
T ss_dssp HHTTHHHHHS
T ss_pred HHHHCCCCCC
T ss_conf 9874111027