HHsearch alignment of GI: 254781115 and MMDB domain: 3h38_A_161-247

>3h38_A (A:161-247) TRNA nucleotidyl transferase-related protein; transferase/RNA, nucleotide-binding, RNA-binding; 2.37A {Thermotoga maritima} PDB: 3h37_A 3h39_A* 3h3a_A*
Probab=99.76  E-value=3.5e-20  Score=154.23  Aligned_cols=85  Identities=28%  Similarity=0.398  Sum_probs=79.0

Q ss_pred             HHHHHCCCCCCHHHCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHH--HCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf             777642764310010421003320122013643311110001233332--102220577688788642110189999987
Q gi|254781115|r  148 RTIKFIGDAHHRILEDYLRILRFFRFFAHYGEKNIDSDGLVASIKAKK--GLKILSSERIWSEINKLLEAKNPLNAIVHM  225 (416)
Q Consensus       148 ~~ir~v~~~~~rf~EDpLRiLRa~RFasrlg~f~id~~t~~ai~~~~~--~L~~iS~ERI~~El~KiL~~~~~~~~l~~L  225 (416)
                      |+||++|++  +|.|||+|||||+||+++|| |.++++|..+|++.++  .++.+|+|||+.|+.||+.+++|..++..|
T Consensus         1 G~lr~~~~~--~f~eDPlRilRa~Rfaarlg-f~i~~~t~~~i~~~~~~~~l~~is~eRi~~El~kll~~~~~~~~l~~l   77 (87)
T 3h38_A            1 GVIRVLHTL--SFVDDPTRILRAIRFEQRFD-FRIEETTERLLKQAVEEGYLERTTGPRLRQELEKILEEKNPLKSIRRM   77 (87)
T ss_dssp             TEECBSSTT--HHHHCTTHHHHHHHHHHHTT-CEECHHHHHHHHHHHHTTHHHHSCHHHHHHHHHHHHTSSCHHHHHHHH
T ss_pred             HHHHHHHHH--HHHHCCHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf             665422467--77625078899999976214-565504667888863012111355088999999876313378999999


Q ss_pred             HHCCCCCCCC
Q ss_conf             5300233468
Q gi|254781115|r  226 YNGGIFKEIF  235 (416)
Q Consensus       226 ~~~gll~~if  235 (416)
                      .++|++..+|
T Consensus        78 ~~~gll~~~f   87 (87)
T 3h38_A           78 AQFDVIKHLF   87 (87)
T ss_dssp             HHTTHHHHHS
T ss_pred             HHHHCCCCCC
T ss_conf             9874111027