HHSEARCH alignment of GI: 254781115 and SCOP domain: d2fcla1

Alignment

Probab=96.02  E-value=0.017  Score=33.29  Aligned_cols=79  Identities=24%  Similarity=0.181  Sum_probs=52.5

Q ss_pred             HHHHHHHHHHHCCCEEEEEHHHHHHHHCCC--CCCEEEEEEEC-CHHHHHHHHHHCCCCEECCCCC-C---CEEEEEECC
Q ss_conf             899999999978985999706998887788--98608999808-9899999998769956213431-4---469999899
Q gi|254781115|r   14 DLINILSLLNKGEDKSCIVGGAVRDSLMNL--SVQDIDIATTI-LPDRVMRIFSKTRYKVIPTSIS-Y---GTIKIICRK   86 (416)
Q Consensus        14 ~~~~i~~~l~~~g~~~~~VGG~VRD~ll~~--~~~DiD~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~---gt~~~~~~~   86 (416)
                      .+..+.+.|++.|.+-.+|||+.= .+-|.  .++||||+|.. +.+.+.+++...+......... +   +......++
T Consensus         9 ~l~~~~~~l~~~~i~~~i~Gg~A~-~~~G~~r~t~DiDi~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g   87 (157)
T d2fcla1           9 VLRKIYDRLKNEKVNWVVTGSLSF-ALQGVPVEVHDIDIQTDEEGAYEIERIFSEFVSKKVRFSSTEKICSHFGELIIDG   87 (157)
T ss_dssp             HHHHHHHHHTTSSCCEEEEHHHHH-HHTTCCCCCCSEEEEECHHHHHHHHHHTGGGEEEEEEEEECSSEEEEEEEEEETT
T ss_pred             HHHHHHHHHHHCCCCEEEEHHHHH-HHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECC
T ss_conf             999999999877999998869999-9879999988635897445799999999982747877566221001248995099


Q ss_pred             EEEEEEC
Q ss_conf             8886421
Q gi|254781115|r   87 KYFDITT   93 (416)
Q Consensus        87 ~~~di~~   93 (416)
                      ..+|+.+
T Consensus        88 ~~idi~~   94 (157)
T d2fcla1          88 IKVEIMG   94 (157)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEC
T ss_conf             5899967

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Nucleotidyltransferase
superfamily: Nucleotidyltransferase
family: TM1012-like
domain: Hypothetical protein TM1012
species: Thermotoga maritima [TaxId: 2336]