BLAST/PSIBLAST alignment of GI: 254781115 and GI: 116253238 at iteration 1
>gi|116253238|ref|YP_769076.1| poly(A) polymerase [Rhizobium leguminosarum bv. viciae 3841] Length = 417
>gi|115257886|emb|CAK08984.1| putative poly(A) polymerase [Rhizobium leguminosarum bv. viciae 3841] Length = 417
 Score =  322 bits (826), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 161/402 (40%), Positives = 230/402 (57%), Gaps = 6/402 (1%)

Query: 1   MVSIVQHKWFHDSDLINILSLLNKGEDKSCIVGGAVRDSLMNLSVQDIDIATTILPDRVM 60
           M  I    WF D  L  IL+LL+    +  +VGGAVR+SLM L V DIDIATT+ P+ VM
Sbjct: 1   MTGIADQAWFRDPALGRILALLSADGGEGRVVGGAVRNSLMGLPVNDIDIATTLRPETVM 60

Query: 61  RIFSKTRYKVIPTSISYGTIKIICRKKYFDITTLRSDLITDGRYAKVVFTRDWKADSLRR 120
                   K +PT + +GT+ ++   K F++TTLR+D+ TDGR AKV F+ DWKAD+ RR
Sbjct: 61  ERAEAAGIKAVPTGLDHGTVTLVIDGKPFEVTTLRTDVETDGRRAKVAFSTDWKADAERR 120

Query: 121 DFTINALYADQQGKVIDYVGGLNDLRNRTIKFIGDAHHRILEDYLRILRFFRFFAHYGEK 180
           D TINALYAD  G+V+D VGGL D+  R I+FIGDA  RI ED+LRILRFFRFFA+YG  
Sbjct: 121 DLTINALYADAGGEVVDLVGGLADIERRNIRFIGDAAMRIAEDHLRILRFFRFFAYYGSG 180

Query: 181 NIDSDGLVASIKAKKGLKILSSERIWSEINKLLEAKNPLNAIVHMYNGGIFKEIFLDVQE 240
             D++GL A   A+  L  LS+ER+WSE+ KLL A +P  A++ M    +  EI  + + 
Sbjct: 181 RPDAEGLKACSAARSKLTSLSAERVWSELRKLLGAADPGRALLWMRQVAVLTEILPETER 240

Query: 241 ISLDQLSQVIEAEQVFEWKIDSLLRFIVLISWQDKKSILSMAKKFSLPREIRYFLISFFN 300
             +D +  +I  E+   W  D LLR   ++   D   + ++A +  L       L ++  
Sbjct: 241 WGIDAIPSLITTEKALGWSPDPLLRLAAIVP-PDVARLEALAARLKLSNAEAATLKAWAM 299

Query: 301 CNFNQKTLSIPEIKKLFYLYGDKVMIAKLKIFLALHYNNLTH-----QDTCFILQVLSDI 355
                  +S    ++L Y  G   +  +LK+ LA+              +  ++++L   
Sbjct: 300 AAPVNDDMSSAAFERLLYRNGAGGITTRLKLALAVARGKAESDFDEMARSARLIKLLDRA 359

Query: 356 IHWKKPLFPLTGDDVVKYGIPPGKKVGNILVHCKQEWINSSF 397
           +HWKKP FPL G DV+  GI  G +VG +L   + +W+  +F
Sbjct: 360 MHWKKPQFPLNGGDVISAGIASGPRVGELLAGLENQWVEENF 401