HHsearch alignment for GI: 254781118 and conserved domain: PRK00476
>PRK00476 aspS aspartyl-tRNA synthetase; Validated.
Probab=100.00 E-value=0 Score=838.60 Aligned_cols=429 Identities=27% Similarity=0.474 Sum_probs=336.6
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCC--CEEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCCEEE
Q ss_conf 6788859999986515555643598899986881114877--21899779935999980542796788887423743168
Q gi|254781118|r 37 FHRDITNAEVREKYSHLQNDEKSQDMITVAGRVYSSRNSG--MFMDIHDASGKIQIFTHKDTADQDSQNLLSMIDIGDII 114 (502)
Q Consensus 37 f~~t~~~~e~~~~~~~l~~~~~~~~~V~i~Grv~~~R~~G--~Fi~LrD~~g~iQv~~~~~~~~~~~~~~~~~l~~gd~i 114 (502)
T Consensus 2 ~~rth~~~~l~~--------~~~g~~V~v~GwV~~~R~~Gkl~F~~LrD~~G~iQiv~~~~--~~~~~~~~~~l~~e~iv 71 (587)
T PRK00476 2 MMRTHYCGELRE--------SHVGQTVTLCGWVHRRRDHGGVIFIDLRDREGIVQVVFDPD--DAEAFAVAESLRSEYVI 71 (587)
T ss_pred CCCCCCCCCCCH--------HHCCCEEEEEEEEEEEECCCCCEEEEEEECCCCEEEEECCC--CHHHHHHHHCCCCCCEE
T ss_conf 965661312884--------76989899978575366479829999983897889999188--77899999669998789
Q ss_pred EEEEEEEC---------CCCCCCCCCCCEEEEECCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99657630---------566553421220122113555-43222125311445420110012344444335788999999
Q gi|254781118|r 115 GITGQVRR---------TKRGELTVNAQKIIMLSKALN-SIPETYYGLSDVEIRYRKRYLDIISNSDSKIRFQQRSLLIS 184 (502)
Q Consensus 115 ~v~G~v~~---------~~~gelei~~~~~~~l~~~~~-~lP~~~~~~~d~e~rl~~R~LDl~~~~~~~~~l~~Rs~i~~ 184 (502)
T Consensus 72 ~V~G~v~~rp~~~~n~~~~tGeiei~~~~i~iLska~~lP~~~~~~~~~~e~~Rl~~RyLDL-r~~~~~~~fr~Rs~i~~ 150 (587)
T PRK00476 72 QVTGKVRARPEGTVNPNLATGEIEVLASELEILNKSKTLPFQIDDETNVSEELRLKYRYLDL-RRPEMQNNLKLRSKVTS 150 (587)
T ss_pred EEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH-CCHHHHHHHHHHHHHHH
T ss_conf 99989993576566877888728999708999876889998865566777888655478887-21778899999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCC-CCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 9987385534543115653235666554203641222225432-100122344442102430245434532025423443
Q gi|254781118|r 185 QIRHFMEKKGFMEVETPILQPIYGGATADPFKTHHNILKADMY-LRIAPELYLKRVLISGLTDQVFELNRNFRNEGVSSR 263 (502)
Q Consensus 185 ~iR~~l~~~gF~EveTP~L~~~~~g~~~~~F~~~~~~~~~~~y-L~qSpql~~k~l~~~G~~drvfeI~~~FR~E~~~~~ 263 (502)
T Consensus 151 ~iR~fl~~~gFiEVeTPiL~~s~~eGA~~-F~vpsr~~~~~fyaL~qSPQLykq~L~vgG~-erVyeig~~FRnE~~~t~ 228 (587)
T PRK00476 151 AIRNFLDDNGFLEIETPILTKSTPEGARD-YLVPSRVHPGKFYALPQSPQLFKQLLMVAGF-DRYYQIARCFRDEDLRAD 228 (587)
T ss_pred HHHHHHHHCCCCEECCCCCCCCCCCCCCC-CCCCCCCCCCCEECCCCCHHHHHHHHHHCCC-CEEEEECCCCCCCCCCCC
T ss_conf 99999997597400475432568666644-3013105788551356797999999885175-527996431238888766
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEECCCCCCC-------------
Q ss_conf 2452100010011000111245678999988998708861311753411332210000000233448-------------
Q gi|254781118|r 264 HNPEFTMIEAYWAYTDYRDMMKLVEDLCHNLAKTLHGTTDIPFGEKVISFKAPFACKSMLQLVKEAT------------- 330 (502)
Q Consensus 264 H~pEFt~lE~e~a~~d~~dim~l~E~li~~i~~~~~~~~~~~~~~~~~d~~~~f~~~~~~e~i~~~~------------- 330 (502)
T Consensus 229 r~pEFt~lE~E~af~d~~dvm~~~E~li~~v~~~v~~~----------~l~~pf~rit~~eai~~yG~DKPDlR~~~~l~ 298 (587)
T PRK00476 229 RQPEFTQIDIEMSFVTQEDVMDLMEGLIRHVFKEVLGV----------DLTKPFPRMTYAEAMRRYGSDKPDLRFPLELV 298 (587)
T ss_pred CCCHHHEEEHHHHCCCHHHHHHHHHHHHHHHHHHHCCC----------CCCCCCCEEEHHHHHHHHCCCCCCCCCCCHHH
T ss_conf 68234231111111689999999999999999997197----------47888424569999998579996545762154
Q ss_pred ------------------------------------------------------CCCCCCCC------------CHHHHH
Q ss_conf ------------------------------------------------------86215433------------216777
Q gi|254781118|r 331 ------------------------------------------------------GLDFMLLK------------SDQEAR 344 (502)
Q Consensus 331 ------------------------------------------------------g~~~~~~~------------~~e~~~ 344 (502)
T Consensus 299 d~~~~~~~~~~~~f~~~~~~~~~~v~~i~~p~~~~~~r~~id~l~~~~~~~~~~~l~~i~~~~~~~~spi~k~~~~~~~~ 378 (587)
T PRK00476 299 DVTDLFKDSGFKVFAGAANDPGGRVKAIRVPGGASLSRKQIDELTEFAKIYGAKGLAYIKVNEDGLKGPIAKFLSEEELE 378 (587)
T ss_pred HHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCHHHHH
T ss_conf 66887615641678999860588699997468676666679999999998188773379980555656077646999999
Q ss_pred HHHHHHCCCCC------------CCCCHHHHHHHHHHH--CCCHHEECCEEEECCCH------------HHHHHHCCCCC
Q ss_conf 65652023543------------322318999887652--13010105435655800------------23453035796
Q gi|254781118|r 345 VAAQSIGITVE------------NDALWGEVMMTIFEE--KIEKNIVNPTHITDFPK------------DISPFAKEVAG 398 (502)
Q Consensus 345 ~~~~~~g~~~~------------~~~~~g~l~~~~~e~--~ie~~~~~p~fI~dfP~------------~~~Pf~~~~~~ 398 (502)
T Consensus 379 ~l~~~~~~~~gd~~~f~~~~~~~~~~~lg~~r~~~~~~~~li~~~~~~p~fV~dfPlfe~~~~~~~~~a~hhPFt~P~~~ 458 (587)
T PRK00476 379 ALLERTGAKDGDLIFFGADKKKVVNDALGALRLKLGKELGLIDEDKFAFLWVVDFPMFEYDEEEGRYVAAHHPFTMPKDE 458 (587)
T ss_pred HHHHHHCCCCCCEEEEECCCCHHHHHHHCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99998488778779993596078887633179999888466666666426898145311442025631021774588853
Q ss_pred CH---------HHEEECCEEECCEEEEECHHEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEECC
Q ss_conf 72---------110111355557872002110057999999999999887305733545089999976086984613246
Q gi|254781118|r 399 EK---------RLVERFETYCNGWEICNAFSELNDPVEQRIRMEQQVEQSHQRGEHTILDEDFLDAMTYGMPPASGLGLG 469 (502)
Q Consensus 399 ~~---------~~~~~fdl~~~G~Ei~~G~~e~~dp~~q~~r~~~~~~~~~~~~~~~~~~~~yl~a~~yG~PPhgG~glG 469 (502)
T Consensus 459 ~~~~~~~dp~~~~~~~yDLv~~G~El~~Gs~Ri~d~~~q~~~~~~~gl~~~---~~~~~F~~yl~al~yG~PPhgG~GlG 535 (587)
T PRK00476 459 DLELLETDPGKALAYAYDLVLNGYELGGGSIRIHRPEIQEKVFEILGISEE---EAEEKFGFLLDALKYGAPPHGGIAFG 535 (587)
T ss_pred CHHHHHCCHHHHHEEEEEEEECCEEECCCEEECCCHHHHHHHHHHCCCCHH---HHHHHHHHHHHHHHCCCCCCCEEEEC
T ss_conf 788775381232346740530778951350322799999999998599989---99888889999976799997637614
Q ss_pred HHHHHHHHCCCCCCEECCCCCC
Q ss_conf 8999899826288404127867
Q gi|254781118|r 470 IDRLIMLLTNAPSIRDVILFPA 491 (502)
Q Consensus 470 ldRL~m~l~g~~~IRdvi~FP~ 491 (502)
T Consensus 536 iDRLvmlltg~~nIRDVI~FPk 557 (587)
T PRK00476 536 LDRLVMLLAGADSIRDVIAFPK 557 (587)
T ss_pred HHHHHHHHCCCCCHHEEEECCC
T ss_conf 9999999759995530650789