HHsearch alignment for GI: 254781118 and conserved domain: PRK03991

Probab=97.32  E-value=0.00038  Score=45.87  Aligned_cols=115  Identities=23%  Similarity=0.285  Sum_probs=72.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CC--C-----CCCEEEEECCCCCCCCCCCHH-----HHHHHHHHHCCC
Q ss_conf             8899999999873855345431156532356-66--5-----542036412222254321001-----223444421024
Q gi|254781118|r  177 QQRSLLISQIRHFMEKKGFMEVETPILQPIY-GG--A-----TADPFKTHHNILKADMYLRIA-----PELYLKRVLISG  243 (502)
Q Consensus       177 ~~Rs~i~~~iR~~l~~~gF~EveTP~L~~~~-~g--~-----~~~~F~~~~~~~~~~~yL~qS-----pql~~k~l~~~G  243 (502)
T Consensus       228 ~i~~lle~Yv~~~~~~~G~~eV~TP~m~d~~~~~~sgH~~~f~e~my~~~~d--~~~~~LrpmnCpgh~~i~~~~-~~SY  304 (613)
T PRK03991        228 LMKDLLEDYVYNLVKELGAMPVETPNMYDLSHPAIREHADKFGERQYRVKSD--KKDLMLRFAACFGQFAMLKDM-TISY  304 (613)
T ss_pred             HHHHHHHHHHHHHHHHCCCEEEECCCEEECCCCHHHHHHHHHCCCCEEEECC--CHHHCCCCCCCCCCEEEECCC-CCCH
T ss_conf             9999999999999986396684576164055402556887611134256327--633230445786312351024-4574


Q ss_pred             --CCHHHHHHHHH-HCCCCCCC----CCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHH
Q ss_conf             --30245434532-02542344----32452100010011000-1112456789999889
Q gi|254781118|r  244 --LTDQVFELNRN-FRNEGVSS----RHNPEFTMIEAYWAYTD-YRDMMKLVEDLCHNLA  295 (502)
Q Consensus       244 --~~drvfeI~~~-FR~E~~~~----~H~pEFt~lE~e~a~~d-~~dim~l~E~li~~i~  295 (502)
T Consensus       305 RdLPlRl~E~g~~syR~E~SG~L~GL~RVR~FTqdDaHI-FC~~~dQi~~E~~~~~~li~  363 (613)
T PRK03991        305 KNLPLKMYELSDYSFRLEQRGELVGLKRLRAFTMPDMHT-LCKDMDEAMEEFEKQHKLIL  363 (613)
T ss_pred             HHCCHHHHHHCCCEEECCCCCCEECEEEEECCCCCCCEE-CCCCHHHHHHHHHHHHHHHH
T ss_conf             326467765224202125677444401332356686113-16877899999999999999