HHsearch alignment for GI: 254781118 and conserved domain: PRK04483
>PRK04483 threonyl-tRNA synthetase; Validated.
Probab=97.33 E-value=0.0002 Score=47.65 Aligned_cols=250 Identities=13% Similarity=0.101 Sum_probs=118.4
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCC--------CCC-CCCCEEEEEEEECCCCCCCCEEE
Q ss_conf 687999999999999998388878887678885999998651555--------564-35988999868811148772189
Q gi|254781118|r 10 LSSNSIEVRSQKLNMLRKSLAEVYPAHFHRDITNAEVREKYSHLQ--------NDE-KSQDMITVAGRVYSSRNSGMFMD 80 (502)
Q Consensus 10 ~~~~~~~~R~~kl~~l~~~~~~pyP~~f~~t~~~~e~~~~~~~l~--------~~~-~~~~~V~i~Grv~~~R~~G~Fi~ 80 (502)
T Consensus 112 ~t~~Dl~~IE~~M~~iik~~~-~~---~r~~~s~~eA~~~f~~~~~~yK~eli~~~~~~~~~is~Y-------~~g~f~D 180 (634)
T PRK04483 112 FTPEDMAAIEQRMQELIAQDY-DV---IKKVTPRAEVIEVFAQRGEEYKLRLIEDMSDDITAMGLY-------YHQEYVD 180 (634)
T ss_pred CCHHHHHHHHHHHHHHHCCCC-CE---EEEEECHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEE-------ECCCEEE
T ss_conf 998899999999999860778-75---999807999999998769778787986448887358899-------7388758
Q ss_pred EE-----CCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCC--------CEEEEECCCCCCCCC
Q ss_conf 97-----79935999980542796788887423743168996576305665534212--------201221135554322
Q gi|254781118|r 81 IH-----DASGKIQIFTHKDTADQDSQNLLSMIDIGDIIGITGQVRRTKRGELTVNA--------QKIIMLSKALNSIPE 147 (502)
Q Consensus 81 Lr-----D~~g~iQv~~~~~~~~~~~~~~~~~l~~gd~i~v~G~v~~~~~gelei~~--------~~~~~l~~~~~~lP~ 147 (502)
T Consensus 181 LCrGPHv~~T~~ikafkL~~vsga---YWrGd~~n~~LqRIYG~af~~k~~-L~~yl~~~eEakkRDHRklGkel~LF~f 256 (634)
T PRK04483 181 MCRGPHVPNTRFLKAFKLTRISGA---YWRGDAKNEQLQRIYGTAWADKKQ-LDAYILRMEEADKRDHRKIGKAQDLFHL 256 (634)
T ss_pred ECCCCCCCCCCCCCHHEEEEHHHH---EECCCCCCCCEEEEEEEEECCHHH-HHHHHHHHHHHHHCCHHHHHHHCCEEEE
T ss_conf 379998897111311123011021---126887571028999995089899-9999999999886588887542110673
Q ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC----CCC----CCCEEEEEC
Q ss_conf 212531144542011001234444433578899999999873855345431156532356----665----542036412
Q gi|254781118|r 148 TYYGLSDVEIRYRKRYLDIISNSDSKIRFQQRSLLISQIRHFMEKKGFMEVETPILQPIY----GGA----TADPFKTHH 219 (502)
Q Consensus 148 ~~~~~~d~e~rl~~R~LDl~~~~~~~~~l~~Rs~i~~~iR~~l~~~gF~EveTP~L~~~~----~g~----~~~~F~~~~ 219 (502)
T Consensus 257 ~~~~---pG-----~~~wl---P~---G~~i~~~le~~~r~~~~~~Gy~eV~tP~i~~~~Lw~~SGH~~~Y~e~Mf~~~~ 322 (634)
T PRK04483 257 QEEA---PG-----LVFWH---PK---GWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQDAMFFTES 322 (634)
T ss_pred CCCC---CC-----CEEEC---CC---HHHHHHHHHHHHHHHHHHCCCEEEECCEECCHHHHHHCCCHHHHHHCCCEECC
T ss_conf 3778---86-----43881---66---89999999999999999829959988625137787625616455303713425
Q ss_pred CCCCCCCCCC-----HHHHHHHHHHHCC--CCCHHHHHHHHHHCCCCCCC----CCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 2222543210-----0122344442102--43024543453202542344----32452100010011000111245678
Q gi|254781118|r 220 NILKADMYLR-----IAPELYLKRVLIS--GLTDQVFELNRNFRNEGVSS----RHNPEFTMIEAYWAYTDYRDMMKLVE 288 (502)
Q Consensus 220 ~~~~~~~yL~-----qSpql~~k~l~~~--G~~drvfeI~~~FR~E~~~~----~H~pEFt~lE~e~a~~d~~dim~l~E 288 (502)
T Consensus 323 --~~~~~~lKPMNCP~H~~if~~~~-rSYRdLPlR~aE~g~~~R~E~SG~L~GL~RvR~FtqdDaHI-Fc~~dQi~~Ei~ 398 (634)
T PRK04483 323 --EKRTYAVKPMNCPGHVQVFNQGL-HSYRDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHV-FCLESQIEAEVT 398 (634)
T ss_pred --CCCEEEECCCCCHHHHHHHHCCC-CCHHHCCHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCEE-ECCHHHHHHHHH
T ss_conf --54035515768564879987177-44443436655433022056776545745688998898335-638999999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254781118|r 289 DLCH 292 (502)
Q Consensus 289 ~li~ 292 (502)
T Consensus 399 ~~l~ 402 (634)
T PRK04483 399 AFHQ 402 (634)
T ss_pred HHHH
T ss_conf 9999