HHsearch alignment for GI: 254781118 and conserved domain: PRK04483

>PRK04483 threonyl-tRNA synthetase; Validated.
Probab=97.33  E-value=0.0002  Score=47.65  Aligned_cols=250  Identities=13%  Similarity=0.101  Sum_probs=118.4

Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCC--------CCC-CCCCEEEEEEEECCCCCCCCEEE
Q ss_conf             687999999999999998388878887678885999998651555--------564-35988999868811148772189
Q gi|254781118|r   10 LSSNSIEVRSQKLNMLRKSLAEVYPAHFHRDITNAEVREKYSHLQ--------NDE-KSQDMITVAGRVYSSRNSGMFMD   80 (502)
Q Consensus        10 ~~~~~~~~R~~kl~~l~~~~~~pyP~~f~~t~~~~e~~~~~~~l~--------~~~-~~~~~V~i~Grv~~~R~~G~Fi~   80 (502)
T Consensus       112 ~t~~Dl~~IE~~M~~iik~~~-~~---~r~~~s~~eA~~~f~~~~~~yK~eli~~~~~~~~~is~Y-------~~g~f~D  180 (634)
T PRK04483        112 FTPEDMAAIEQRMQELIAQDY-DV---IKKVTPRAEVIEVFAQRGEEYKLRLIEDMSDDITAMGLY-------YHQEYVD  180 (634)
T ss_pred             CCHHHHHHHHHHHHHHHCCCC-CE---EEEEECHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEE-------ECCCEEE
T ss_conf             998899999999999860778-75---999807999999998769778787986448887358899-------7388758


Q ss_pred             EE-----CCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCC--------CEEEEECCCCCCCCC
Q ss_conf             97-----79935999980542796788887423743168996576305665534212--------201221135554322
Q gi|254781118|r   81 IH-----DASGKIQIFTHKDTADQDSQNLLSMIDIGDIIGITGQVRRTKRGELTVNA--------QKIIMLSKALNSIPE  147 (502)
Q Consensus        81 Lr-----D~~g~iQv~~~~~~~~~~~~~~~~~l~~gd~i~v~G~v~~~~~gelei~~--------~~~~~l~~~~~~lP~  147 (502)
T Consensus       181 LCrGPHv~~T~~ikafkL~~vsga---YWrGd~~n~~LqRIYG~af~~k~~-L~~yl~~~eEakkRDHRklGkel~LF~f  256 (634)
T PRK04483        181 MCRGPHVPNTRFLKAFKLTRISGA---YWRGDAKNEQLQRIYGTAWADKKQ-LDAYILRMEEADKRDHRKIGKAQDLFHL  256 (634)
T ss_pred             ECCCCCCCCCCCCCHHEEEEHHHH---EECCCCCCCCEEEEEEEEECCHHH-HHHHHHHHHHHHHCCHHHHHHHCCEEEE
T ss_conf             379998897111311123011021---126887571028999995089899-9999999999886588887542110673


Q ss_pred             CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC----CCC----CCCEEEEEC
Q ss_conf             212531144542011001234444433578899999999873855345431156532356----665----542036412
Q gi|254781118|r  148 TYYGLSDVEIRYRKRYLDIISNSDSKIRFQQRSLLISQIRHFMEKKGFMEVETPILQPIY----GGA----TADPFKTHH  219 (502)
Q Consensus       148 ~~~~~~d~e~rl~~R~LDl~~~~~~~~~l~~Rs~i~~~iR~~l~~~gF~EveTP~L~~~~----~g~----~~~~F~~~~  219 (502)
T Consensus       257 ~~~~---pG-----~~~wl---P~---G~~i~~~le~~~r~~~~~~Gy~eV~tP~i~~~~Lw~~SGH~~~Y~e~Mf~~~~  322 (634)
T PRK04483        257 QEEA---PG-----LVFWH---PK---GWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQDAMFFTES  322 (634)
T ss_pred             CCCC---CC-----CEEEC---CC---HHHHHHHHHHHHHHHHHHCCCEEEECCEECCHHHHHHCCCHHHHHHCCCEECC
T ss_conf             3778---86-----43881---66---89999999999999999829959988625137787625616455303713425


Q ss_pred             CCCCCCCCCC-----HHHHHHHHHHHCC--CCCHHHHHHHHHHCCCCCCC----CCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             2222543210-----0122344442102--43024543453202542344----32452100010011000111245678
Q gi|254781118|r  220 NILKADMYLR-----IAPELYLKRVLIS--GLTDQVFELNRNFRNEGVSS----RHNPEFTMIEAYWAYTDYRDMMKLVE  288 (502)
Q Consensus       220 ~~~~~~~yL~-----qSpql~~k~l~~~--G~~drvfeI~~~FR~E~~~~----~H~pEFt~lE~e~a~~d~~dim~l~E  288 (502)
T Consensus       323 --~~~~~~lKPMNCP~H~~if~~~~-rSYRdLPlR~aE~g~~~R~E~SG~L~GL~RvR~FtqdDaHI-Fc~~dQi~~Ei~  398 (634)
T PRK04483        323 --EKRTYAVKPMNCPGHVQVFNQGL-HSYRDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHV-FCLESQIEAEVT  398 (634)
T ss_pred             --CCCEEEECCCCCHHHHHHHHCCC-CCHHHCCHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCEE-ECCHHHHHHHHH
T ss_conf             --54035515768564879987177-44443436655433022056776545745688998898335-638999999999


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254781118|r  289 DLCH  292 (502)
Q Consensus       289 ~li~  292 (502)
T Consensus       399 ~~l~  402 (634)
T PRK04483        399 AFHQ  402 (634)
T ss_pred             HHHH
T ss_conf             9999