HHsearch alignment for GI: 254781118 and conserved domain: PRK05159
>PRK05159 aspC aspartyl-tRNA synthetase; Provisional.
Probab=100.00 E-value=0 Score=839.23 Aligned_cols=416 Identities=25% Similarity=0.451 Sum_probs=356.5
Q ss_pred CCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCC--CEEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEE
Q ss_conf 88859999986515555643598899986881114877--2189977993599998054279678888742374316899
Q gi|254781118|r 39 RDITNAEVREKYSHLQNDEKSQDMITVAGRVYSSRNSG--MFMDIHDASGKIQIFTHKDTADQDSQNLLSMIDIGDIIGI 116 (502)
Q Consensus 39 ~t~~~~e~~~~~~~l~~~~~~~~~V~i~Grv~~~R~~G--~Fi~LrD~~g~iQv~~~~~~~~~~~~~~~~~l~~gd~i~v 116 (502)
T Consensus 3 r~h~~~dl~--------~~~~g~~V~v~G~v~~~R~~Gkl~Fi~LrD~~g~iQ~~~~~~~~~~~~~~~~~~l~~g~~v~v 74 (434)
T PRK05159 3 KRHYTSEVT--------PELDGKEVTLAGWVHEIRDLGGIKFLLLRDRTGIIQVVVPKKKVDEELFEGIKKLSRESVVSV 74 (434)
T ss_pred CCCCCCCCC--------HHHCCCEEEEEEEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEE
T ss_conf 631315499--------477999999989887288179859999996980289999799899899999857999629999
Q ss_pred EEEEECCCC--CCCCCCCCEEEEECCCCCCCCCCCCCC--CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 657630566--553421220122113555432221253--1144542011001234444433578899999999873855
Q gi|254781118|r 117 TGQVRRTKR--GELTVNAQKIIMLSKALNSIPETYYGL--SDVEIRYRKRYLDIISNSDSKIRFQQRSLLISQIRHFMEK 192 (502)
Q Consensus 117 ~G~v~~~~~--gelei~~~~~~~l~~~~~~lP~~~~~~--~d~e~rl~~R~LDl~~~~~~~~~l~~Rs~i~~~iR~~l~~ 192 (502)
T Consensus 75 ~G~v~~~~~~~~~~ev~~~~i~ils~a~~~lP~~~~~~~~~~~~~rl~~R~LdL-r~~~~~~~~r~Rs~i~~~iR~fl~~ 153 (434)
T PRK05159 75 TGVVKESEKAPNGVEVQPEEIEVLNKADEPLPLDPSEKVEAELDTRLDNRFLDL-RRPRVQAIFKIRSEVLRAFREFLYE 153 (434)
T ss_pred EEEEECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999985899997589999899998347777887654556769888865301452-3978999999999999999999987
Q ss_pred HHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC-CCCCCCCCC
Q ss_conf 3454311565323566655420364122222543210012234444210243024543453202542344-324521000
Q gi|254781118|r 193 KGFMEVETPILQPIYGGATADPFKTHHNILKADMYLRIAPELYLKRVLISGLTDQVFELNRNFRNEGVSS-RHNPEFTMI 271 (502)
Q Consensus 193 ~gF~EveTP~L~~~~~g~~~~~F~~~~~~~~~~~yL~qSpql~~k~l~~~G~~drvfeI~~~FR~E~~~~-~H~pEFt~l 271 (502)
T Consensus 154 ~gF~EVeTP~l~~~~~eGga~~f~~--~~~~~~~yL~~Spqly~q~li~~G~-~rvfeI~~~FR~E~~~t~RH~pEFT~l 230 (434)
T PRK05159 154 EGFTEIFTPKIVATGTEGGTELFPV--KYFEKEAFLAQSPQLYKQMMMAAGF-ERVFEIGPAFRAEEHNTTRHLNEAISI 230 (434)
T ss_pred CCCEEEECCCCCCCCCCCCCCCCCE--EECCCEEEECCCCHHHHHHHHHCCC-CCEEEECCCEECCCCCCCCCHHHHHHH
T ss_conf 7919997874325678875565861--3127533414683799999876356-855996601023658754453567656
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC---CCEEECCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 10011000111245678999988998708861311---753411332210000000233448862154332167776565
Q gi|254781118|r 272 EAYWAYTDYRDMMKLVEDLCHNLAKTLHGTTDIPF---GEKVISFKAPFACKSMLQLVKEATGLDFMLLKSDQEARVAAQ 348 (502)
Q Consensus 272 E~e~a~~d~~dim~l~E~li~~i~~~~~~~~~~~~---~~~~~d~~~~f~~~~~~e~i~~~~g~~~~~~~~~e~~~~~~~ 348 (502)
T Consensus 231 E~e~af~d~~d~m~~~E~li~~i~~~v~~~~~~~~~~~~~~~~~~~~~-----------------~~rit~~eai~~-l~ 292 (434)
T PRK05159 231 DVEMGFIDEEDVMDLLENLLKYVYEDVAENCEKELELLGIELPVPETP-----------------IPRITYDEAIEI-LK 292 (434)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCC-----------------CCEEEHHHHHHH-HH
T ss_conf 666310689999999999999999999865647786358655667998-----------------647789999999-98
Q ss_pred HHCCCCCCCCCHHHHHHHHHHHCCCHHEE--CCEEEECCCHHHHHH-HCCCCCCHHHEEECCEEECCEEEEECHHEECCH
Q ss_conf 20235433223189998876521301010--543565580023453-035796721101113555578720021100579
Q gi|254781118|r 349 SIGITVENDALWGEVMMTIFEEKIEKNIV--NPTHITDFPKDISPF-AKEVAGEKRLVERFETYCNGWEICNAFSELNDP 425 (502)
Q Consensus 349 ~~g~~~~~~~~~g~l~~~~~e~~ie~~~~--~p~fI~dfP~~~~Pf-~~~~~~~~~~~~~fdl~~~G~Ei~~G~~e~~dp 425 (502)
T Consensus 293 ~~~~~----~~~g~dl~~~~e~~l~~~~~~~~~~fI~d~P~~~~pfy~~~~~~~~~~~~~fdl~~~G~Ei~~G~~r~~d~ 368 (434)
T PRK05159 293 SKGVE----ISWGDDLDTEGERLLGKYVKESDFYFITDWPTEIRPFYTMPYEDDPEITKSFDLMYRGLEITSGAQRIHDY 368 (434)
T ss_pred HCCCC----CCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEECCCH
T ss_conf 51998----78555537899999999847589889989970008654677788832001432677669984310111789
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEECCHHHHHHHHCCCCCCEECCCCCCCCCC
Q ss_conf 9999999999988730573354508999997608698461324689998998262884041278675766
Q gi|254781118|r 426 VEQRIRMEQQVEQSHQRGEHTILDEDFLDAMTYGMPPASGLGLGIDRLIMLLTNAPSIRDVILFPAQRVK 495 (502)
Q Consensus 426 ~~q~~r~~~~~~~~~~~~~~~~~~~~yl~a~~yG~PPhgG~glGldRL~m~l~g~~~IRdvi~FP~~k~~ 495 (502)
T Consensus 369 ~~l~~~~~~~-------g~~~~~~~~yl~al~yG~PP~gG~glGiDRLvm~l~g~~sIrdvi~FPr~~~r 431 (434)
T PRK05159 369 DMLVESIKEK-------GLNPESFEFYLEAFKYGMPPHAGWGLGLERLTMKLLGLENVREAVLFPRDRTR 431 (434)
T ss_pred HHHHHHHHHC-------CCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCHHEEECCCCCCCC
T ss_conf 9999999974-------98989999999996679998755878799999998199966548148899898