HHsearch alignment for GI: 254781118 and conserved domain: cd00645
>cd00645 AsnA Asparagine synthetase (aspartate-ammonia ligase) (AsnA) catalyses the conversion of L-aspartate to L-asparagine in the presence of ATP and ammonia. AsnA is a homodimeric enzyme which is structurally similiar to the catalytic core domain of class II aminoacyl-tRNA synthetases. Ammonia-dependent AsnA is not homologous to the glutamine-dependent asparagine synthetase AsnB.
Probab=98.65 E-value=4.7e-07 Score=64.64 Aligned_cols=268 Identities=15% Similarity=0.207 Sum_probs=138.7
Q ss_pred HHHHHHHH-----HHHHHHHHCCCCCCCCCCC------CCCCEEEEECCCC-CCCCCCCHHHHHHHHHHHCC--CC--CH
Q ss_conf 99998738-----5534543115653235666------5542036412222-25432100122344442102--43--02
Q gi|254781118|r 183 ISQIRHFM-----EKKGFMEVETPILQPIYGG------ATADPFKTHHNIL-KADMYLRIAPELYLKRVLIS--GL--TD 246 (502)
Q Consensus 183 ~~~iR~~l-----~~~gF~EveTP~L~~~~~g------~~~~~F~~~~~~~-~~~~yL~qSpql~~k~l~~~--G~--~d 246 (502)
T Consensus 4 I~~iK~~F~~~L~~~LnL~rVsAPLfv~~~sGlND~LnG~ErpV~F~ik~~~~~~~EIVhSLAKW-KR~aL~~y~f~~ge 82 (309)
T cd00645 4 IKFIKDFFQDNLAKELNLIRVSAPLFVEKGSGLNDNLNGVEKPVSFKVKALPDATLEVVHSLAKW-KRLALARYGFSLGE 82 (309)
T ss_pred HHHHHHHHHHHHHHHHCCEEECCCEEECCCCCCCCCCCCEEECEEEECCCCCCCEEEEEEEHHHH-HHHHHHHCCCCCCC
T ss_conf 99999999999999739279666617707988776878746022863578899726997135888-99999966998994
Q ss_pred HHHHHHHHHC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEECC
Q ss_conf 4543453202-542344324521000100110001112456789999889987088613117534113322100000002
Q gi|254781118|r 247 QVFELNRNFR-NEGVSSRHNPEFTMIEAYWAYTDYRDMMKLVEDLCHNLAKTLHGTTDIPFGEKVISFKAPFACKSMLQL 325 (502)
Q Consensus 247 rvfeI~~~FR-~E~~~~~H~pEFt~lE~e~a~~d~~dim~l~E~li~~i~~~~~~~~~~~~~~~~~d~~~~f~~~~~~e~ 325 (502)
T Consensus 83 GlytdMnAiR~DE~ldn~HSiyVDQWDWEkvI~~~dRnl~~Lk~tV~~Iy~~ik~tE~~v-~~~yp~l~---------~~ 152 (309)
T cd00645 83 GLYTDMNAIRPDEDLDNIHSIYVDQWDWEKVISKGERNLETLKETVNKIYKAIKETELEV-NEKYPQLE---------PI 152 (309)
T ss_pred EECCCCCCCCCCCCCCCCCEEEECCCCHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHH-HHHCCCHH---------HC
T ss_conf 301277625577556876128985003534278522589999999999999999999999-99762034---------40
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHEECCEEEECC--CH-HHHHHHCCCCCCHHH
Q ss_conf 334488621543321677765652023543322318999887652130101054356558--00-234530357967211
Q gi|254781118|r 326 VKEATGLDFMLLKSDQEARVAAQSIGITVENDALWGEVMMTIFEEKIEKNIVNPTHITDF--PK-DISPFAKEVAGEKRL 402 (502)
Q Consensus 326 i~~~~g~~~~~~~~~e~~~~~~~~~g~~~~~~~~~g~l~~~~~e~~ie~~~~~p~fI~df--P~-~~~Pf~~~~~~~~~~ 402 (502)
T Consensus 153 Lp~----~I~Fits-qeL~~~-------YP~------Lt~keRE~~i~ke-~gaVFi~~IG~~L~~g~~Hd~RApDYDDW 213 (309)
T cd00645 153 LPE----EITFITS-QELEDR-------YPD------LTPKEREDAICKE-HGAVFIIGIGGKLSDGKKHDGRAPDYDDW 213 (309)
T ss_pred CCC----CEEEECH-HHHHHH-------CCC------CCHHHHHHHHHHH-HCCEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 888----6089628-999977-------779------9978999999997-29399994488578989566779998675
Q ss_pred EEECCE-----EE-CCEEEEECHHEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH-HCCCCCCCCEECCHHHHHH
Q ss_conf 011135-----55-5787200211005799999999999988730573354508999997-6086984613246899989
Q gi|254781118|r 403 VERFET-----YC-NGWEICNAFSELNDPVEQRIRMEQQVEQSHQRGEHTILDEDFLDAM-TYGMPPASGLGLGIDRLIM 475 (502)
Q Consensus 403 ~~~fdl-----~~-~G~Ei~~G~~e~~dp~~q~~r~~~~~~~~~~~~~~~~~~~~yl~a~-~yG~PPhgG~glGldRL~m 475 (502)
T Consensus 214 ~LNGDilvw~~vl~~a~ElSSMGIRVd~~-----~L~~QL~~~~~~dr~--~l-~~Hk~ll~~~LP~TIGGGIGQSRlcM 285 (309)
T cd00645 214 TLNGDILVWNPVLQRAFELSSMGIRVDEE-----SLQKQLKLAGDEDRL--EL-PFHKMLLNGELPQTIGGGIGQSRLCM 285 (309)
T ss_pred CCCCEEEEECHHCCCEEEEECCEEEECHH-----HHHHHHHHCCCHHHH--CC-HHHHHHHCCCCCCCCCCCCCHHHHHH
T ss_conf 44764899702307322563464688899-----999999975983543--59-89999974999845237603999999
Q ss_pred HHCCCCCCEECCC
Q ss_conf 9826288404127
Q gi|254781118|r 476 LLTNAPSIRDVIL 488 (502)
Q Consensus 476 ~l~g~~~IRdvi~ 488 (502)
T Consensus 286 ~lL~KaHIGEVQ~ 298 (309)
T cd00645 286 FLLQKAHIGEVQA 298 (309)
T ss_pred HHHCCCCCCCEEE
T ss_conf 9975373223675