RPSBLAST alignment for GI: 254781118 and conserved domain: TIGR00458

>gnl|CDD|129550 TIGR00458, aspS_arch, aspartyl-tRNA synthetase, archaeal type. In a multiple sequence alignment of representative asparaginyl-tRNA synthetases (asnS), archaeal/eukaryotic type aspartyl-tRNA synthetases (aspS_arch), and bacterial type aspartyl-tRNA synthetases (aspS_bact), there is a striking similarity between asnS and aspS_arch in gap pattern and in sequence, and a striking divergence of aspS_bact. Consequently, a separate model was built for each of the three groups. This model, aspS_arch, represents aspartyl-tRNA synthetases from the eukaryotic cytosol and from the Archaea. In some species, this enzyme aminoacylates tRNA for both Asp and Asn; Asp-tRNA(asn) is subsequently transamidated to Asn-tRNA(asn). Length = 428
 Score =  130 bits (328), Expect = 8e-31
 Identities = 114/452 (25%), Positives = 204/452 (45%), Gaps = 52/452 (11%)

Query: 57  EKSQDMITVAGRVYSSRNSG--MFMDIHDASGKIQIFTHKDTADQDSQNLLSMIDIGDII 114
           E     +T  G V+  R+ G  +F+ + D  G IQI        ++       +++  ++
Sbjct: 9   EMDGQEVTFMGWVHEIRDLGGLIFVLLRDREGLIQITAPAKKVSKNLFKWAKKLNLESVV 68

Query: 115 GITGQVRRTKR--GELTVNAQKIIMLSKALNSIPETYYGLSDVEI--RYRKRYLDIISNS 170
            + G V+  ++  G   +   KI ++++A   +P         E+  R   R+LD+   +
Sbjct: 69  AVRGIVKIKEKAPGGFEIIPTKIEVINEAKEPLPLDPTEKVPAELDTRLDYRFLDLRRPT 128

Query: 171 DSKIRFQQRSLLISQIRHFMEKKGFMEVETPIL--QPIYGGATADPFKTHHNILKADMYL 228
              I F+ RS ++  +R F+ ++GF+EV TP L      GG    P        + + +L
Sbjct: 129 VQAI-FRIRSGVLESVREFLAEEGFIEVHTPKLVASATEGGTELFPI----TYFEREAFL 183

Query: 229 RIAPELYLKRVLISGLTDQVFELNRNFRNEGVSS-RHNPEFTMIEAYWAYTDYRDMMKLV 287
             +P+LY K+ L++   ++V+E+   FR E  ++ RH  E T I+   A+ D+ D+M ++
Sbjct: 184 GQSPQLY-KQQLMAAGFERVYEIGPIFRAEEHNTHRHLNEATSIDIEMAFEDHHDVMDIL 242

Query: 288 EDLCHNLAKTLHGTTDIPFGEKVISFKAPFACKSMLQLVKEATGLDFMLLKSDQEARVAA 347
           E+L   + + +               + P                 F+ L  D EA   A
Sbjct: 243 EELVVRVFEDVPERCAHQLETLEFKLEKP--------------EGKFVRLTYD-EAIEMA 287

Query: 348 QSIGITVENDALWGEVMMTIFEEKIEKNIVNPTHITDFPKDISPFAKEVAGEKRLVERFE 407
            + G+ +     WGE + T  E+ + + +     ITD+P +I PF   +  E        
Sbjct: 288 NAKGVEIG----WGEDLSTEAEKALGEEMDGLYFITDWPTEIRPFYT-MPDEDNP----- 337

Query: 408 TYCNGWEICNAFSELNDPVE-----QRIRM-EQQVEQSHQRGEHTILDEDFLDAMTYGMP 461
                 EI  +F  +   +E     QRI + +  VE+   +G +    +D+L+A +YGMP
Sbjct: 338 ------EISKSFDLMYRDLEISSGAQRIHLHDLLVERIKAKGLNPEGFKDYLEAFSYGMP 391

Query: 462 PASGLGLGIDRLIMLLTNAPSIRDVILFPAQR 493
           P +G GLG +R +M L    +IR+ +LFP  R
Sbjct: 392 PHAGWGLGAERFVMFLLGLKNIREAVLFPRDR 423