RPSBLAST alignment for GI: 254781118 and conserved domain: TIGR00457
>gnl|CDD|161887 TIGR00457, asnS, asparaginyl-tRNA synthetase. In a multiple sequence alignment of representative asparaginyl-tRNA synthetases (asnS), archaeal/eukaryotic type aspartyl-tRNA synthetases (aspS_arch), and bacterial type aspartyl-tRNA synthetases (aspS_bact), there is a striking similarity between asnS and aspS_arch in gap pattern and in sequence, and a striking divergence of aspS_bact. Consequently, a separate model was built for each of the three groups. This model, asnS, represents asparaginyl-tRNA synthetases from the three domains of life. Some species lack this enzyme and charge tRNA(asn) by misacylation with Asp, followed by transamidation of Asp to Asn. Length = 453
Score = 114 bits (288), Expect = 4e-26
Identities = 107/464 (23%), Positives = 190/464 (40%), Gaps = 63/464 (13%)
Query: 58 KSQDMITVAGRVYSSRNSG--MFMDIHDAS--GKIQIFTHKDTADQDSQNLLSMIDIGDI 113
D +TV+G V + R+S +F++++D S G IQ + + Q L S + G
Sbjct: 14 FVGDEVTVSGWVRTKRSSKKIIFLELNDGSSLGPIQAVINGEDNPYLFQLLKS-LTTGSS 72
Query: 114 IGITGQVRRT--KRGELTVNAQKIIMLSKALNSIPETY----------YGLSDVEIRYRK 161
+ +TG+V + K + + +KI ++ +A P+ Y + +R R
Sbjct: 73 VSVTGKVVESPGKGQPVELQVKKIEVVGEA---EPDDYPLQKKEHSLEFLRDIAHLRLRT 129
Query: 162 RYLDIISNSDSKIRFQQRSLLISQIRHFMEKKGFMEVETPILQPIYGGATADPFKT-HHN 220
L + ++R + L I + ++ GF V PIL + F+
Sbjct: 130 NTLGAVM----RVR----NALSQAIHRYFQENGFTWVSPPILTSNDCEGAGELFRVSTDG 181
Query: 221 ILKA------DMYLRIAPELYLKRVLISGLTDQVFELNRNFRNEGV-SSRHNPEFTMIEA 273
I + + YL ++ +LYL+ ++ +V+ FR E +SRH EF MIE
Sbjct: 182 IDFSQDFFGKEAYLTVSGQLYLETYALA--LSKVYTFGPTFRAEKSNTSRHLSEFWMIEP 239
Query: 274 YWAYTDYRDMMKLVEDLCHNLAKTLHGTTDIPFGEKVISFKAPFACKSMLQLVKEATGLD 333
A+ + D+++L E L + K + +F + ++
Sbjct: 240 EMAFANLNDLLQLAETLIKYIIKAVLENCSQELKFLEKNFDKDLIKR-----LENIINNK 294
Query: 334 FMLLKSDQEARVAAQSIGITVENDALWGEVMMTIFEEKI-EKNIVNPTHITDFPKDISPF 392
F + + +S E + WG+ + T E + E+ P +T++PKDI F
Sbjct: 295 FARITYTDAIEILKES-DKNFEYEDFWGDDLQTEHERFLAEEYFKPPVFVTNYPKDIKAF 353
Query: 393 AKEVAGEKRLVERFETYCNGW-EICNAFSELNDPVEQRI-RMEQQVEQSHQRGEHTILDE 450
++ + + V + G EI +R +++ + + G LD
Sbjct: 354 YMKLNDDGKTVAAMDLLAPGIGEIIGG--------SEREDDLDKLENRMKEMG----LDT 401
Query: 451 D----FLDAMTYGMPPASGLGLGIDRLIMLLTNAPSIRDVILFP 490
D +LD YG P SG GLG +RL+ +T +IRD I FP
Sbjct: 402 DALNWYLDLRKYGSVPHSGFGLGFERLLAYITGLENIRDAIPFP 445