HHsearch alignment for GI: 254781120 and conserved domain: COG0602
>COG0602 NrdG Organic radical activating enzymes [Posttranslational modification, protein turnover, chaperones].
Probab=96.71 E-value=0.0045 Score=43.78 Aligned_cols=83 Identities=31% Similarity=0.536 Sum_probs=56.3
Q ss_pred CCCEEEEEECCCCHHCCCCCCCCCC-HH-----HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 7733898840651004861322441-11-----02789899999999999972220344443434445458611014410
Q gi|254781120|r 112 SRGTLCVSSQVGCSLTCSFCYTGTQ-KL-----VRNLTAEEILLQVLLARSLLGDFPGCEDIEGMVIPSVGRKISNIVMM 185 (384)
Q Consensus 112 ~r~T~CvSSQvGC~m~C~FCaTg~~-G~-----~RNLt~~EIv~Qv~~~~~~l~~~~~~~~~~~~~~~~~~~~i~NiVfM 185 (384)
T Consensus 21 Gr~~vFVR~-~GC~l~C~~Cdt~~t~~~~~~~~~~~~~~~~I~~~i~~~~---------------------~~~~~V~lT 78 (212)
T COG0602 21 GRPSVFVRF-AGCNLRCPGCDTKYTWDFNYGKPGTPMSADEILADIKSLG---------------------YKARGVSLT 78 (212)
T ss_pred CCEEEEEEC-CCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCC---------------------CCCCEEEEE
T ss_conf 714899976-8978878998987660633368988258999999998508---------------------887669981
Q ss_pred CCCCHHH--HHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCH
Q ss_conf 1454454--2899999960376845778775368885138741
Q gi|254781120|r 186 GMGEPLC--NFDNVKKSLSIASDSMGLSFSKRRITLSTSGFVP 226 (384)
Q Consensus 186 GmGEPl~--N~d~v~~ai~~l~~~~g~~~~~r~ITvST~Gi~p 226 (384)
T Consensus 79 G-GEP~~~~~l~~Ll~~l~~----~g~~-----~~lETngti~ 111 (212)
T COG0602 79 G-GEPLLQPNLLELLELLKR----LGFR-----IALETNGTIP 111 (212)
T ss_pred C-CCCCCCCCHHHHHHHHHH----CCCE-----EEEECCCCCC
T ss_conf 8-864662239999999985----8840-----9983799715