HHsearch alignment for GI: 254781120 and conserved domain: COG0621
>COG0621 MiaB 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis].
Probab=97.43 E-value=0.017 Score=39.62 Aligned_cols=184 Identities=20% Similarity=0.330 Sum_probs=123.3
Q ss_pred CCCCCEEEEEECCCCHHCCCCCCCCCC-HHHCCCCHHHHHHHHHHH-HHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECC
Q ss_conf 467733898840651004861322441-110278989999999999-997222034444343444545861101441014
Q gi|254781120|r 110 EKSRGTLCVSSQVGCSLTCSFCYTGTQ-KLVRNLTAEEILLQVLLA-RSLLGDFPGCEDIEGMVIPSVGRKISNIVMMGM 187 (384)
Q Consensus 110 ~~~r~T~CvSSQvGC~m~C~FCaTg~~-G~~RNLt~~EIv~Qv~~~-~~~l~~~~~~~~~~~~~~~~~~~~i~NiVfMGm 187 (384)
T Consensus 140 ~~~~~~A~v~I~eGCn~~CtfCiiP~~RG~~rSr~~e~Il~ev~~Lv~~G---------------------~kEI~L~gq 198 (437)
T COG0621 140 REGGVRAFVKIQEGCNKFCTFCIIPYARGKERSRPPEDILKEVKRLVAQG---------------------VKEIVLTGQ 198 (437)
T ss_pred CCCCEEEEEEHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCC---------------------CEEEEEEEE
T ss_conf 67874799881208678888064053678755779899999999999889---------------------749999988
Q ss_pred -----CCH----HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHH----HHHHHCCCCCCEEEEEECCCCHHHHHH
Q ss_conf -----544----5428999999603768457787753688851387414----788601256517998404551134441
Q gi|254781120|r 188 -----GEP----LCNFDNVKKSLSIASDSMGLSFSKRRITLSTSGFVPN----IARVGEEIGVMLAISLHAVSNDLRNIL 254 (384)
Q Consensus 188 -----GEP----l~N~d~v~~ai~~l~~~~g~~~~~r~ITvST~Gi~p~----I~~la~~~~~~LAiSLha~~~~~R~~l 254 (384)
T Consensus 199 dv~aYG~D~~~~~~~l~~Ll~~l~~I---~G----~~riR~~~~~P~~~~d~lIe~~~~~~--kv~~~lHlPvQsGsd~I 269 (437)
T COG0621 199 DVNAYGKDLGGGKPNLADLLRELSKI---PG----IERIRFGSSHPLEFTDDLIEAIAETP--KVCPHLHLPVQSGSDRI 269 (437)
T ss_pred EHHHCCCCCCCCCCCHHHHHHHHHCC---CC----CEEEEEECCCCHHCCHHHHHHHHCCC--CCCCCCCCCCCCCCHHH
T ss_conf 11010446777766899999999607---99----10899935880011889999986578--41434467555698799
Q ss_pred CC-CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCC-CCCHHHHHHHHHHHCCC-CCEEEEEECCCCCCCC
Q ss_conf 23-312578999999999998625894599999872699-98889999999983254-5316675127788798
Q gi|254781120|r 255 VP-INRKYPLEMLIDACRHYPGLSNARRITFEYVMLKGI-NDSPRDALNLIKILKGI-PAKINLIPFNPWPGCE 325 (384)
Q Consensus 255 mP-i~~~~~l~~l~~a~~~y~~~~~~rrit~EYvli~gv-NDs~e~a~~L~~ll~~~-~~~vNLIp~N~~~~~~ 325 (384)
T Consensus 270 Lk~M~R~yt~e~~~~~i~k~R~-~-~Pd~~i~tDiIVGFPgETEedFe~tl~lv~e~~fd~~~~F~YSpRpGTp 341 (437)
T COG0621 270 LKRMKRGYTVEEYLEIIEKLRA-A-RPDIAISTDIIVGFPGETEEDFEETLDLVEEVRFDRLHVFKYSPRPGTP 341 (437)
T ss_pred HHHHCCCCCHHHHHHHHHHHHH-H-CCCCEEECCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
T ss_conf 9973787679999999999998-6-8985675267997999999999999999997488878533048999982