HHsearch alignment for GI: 254781120 and conserved domain: COG2108
>COG2108 Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme [General function prediction only].
Probab=93.04 E-value=0.96 Score=26.55 Aligned_cols=204 Identities=20% Similarity=0.302 Sum_probs=117.5
Q ss_pred CCHHCCCCCCCCCCHHHCCC---------CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHH
Q ss_conf 51004861322441110278---------989999999999997222034444343444545861101441014544542
Q gi|254781120|r 123 GCSLTCSFCYTGTQKLVRNL---------TAEEILLQVLLARSLLGDFPGCEDIEGMVIPSVGRKISNIVMMGMGEPLCN 193 (384)
Q Consensus 123 GC~m~C~FCaTg~~G~~RNL---------t~~EIv~Qv~~~~~~l~~~~~~~~~~~~~~~~~~~~i~NiVfMGmGEPl~N 193 (384)
T Consensus 37 ~C~~~CfYCPvs~~r~gkdviyaNErpV~~~eDii~ea~~~~------------------a~GasiT------GGdPl~~ 92 (353)
T COG2108 37 LCNRSCFYCPVSDERKGKDVIYANERPVKSVEDIIEEAKLMD------------------ALGASIT------GGDPLLE 92 (353)
T ss_pred CCCCCCCCCCCCHHHCCCCCEEECCCCCCCHHHHHHHHHHHC------------------CCCCCCC------CCCHHHH
T ss_conf 668985257687776488633115631475788999999724------------------6665332------7874899
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHH---HHHHHC-CCCCCEEEEEECCCCHHHHHHCCCCCCCCHHHHHHH
Q ss_conf 8999999603768457787753688851387414---788601-256517998404551134441233125789999999
Q gi|254781120|r 194 FDNVKKSLSIASDSMGLSFSKRRITLSTSGFVPN---IARVGE-EIGVMLAISLHAVSNDLRNILVPINRKYPLEMLIDA 269 (384)
Q Consensus 194 ~d~v~~ai~~l~~~~g~~~~~r~ITvST~Gi~p~---I~~la~-~~~~~LAiSLha~~~~~R~~lmPi~~~~~l~~l~~a 269 (384)
T Consensus 93 ieR~~~~ir~LK~efG~~f---HiHLYT~g~~~~~e~l~~L~eAGLD---EIRfHp~--------~~~~~--~~e~~i~~ 156 (353)
T COG2108 93 IERTVEYIRLLKDEFGEDF---HIHLYTTGILATEEALKALAEAGLD---EIRFHPP--------RPGSK--SSEKYIEN 156 (353)
T ss_pred HHHHHHHHHHHHHHHCCCE---EEEEEECCCCCCHHHHHHHHHCCCC---EEEECCC--------CCCCC--CCHHHHHH
T ss_conf 9999999999987635320---5998406656888999999867987---5994689--------72112--31899999
Q ss_pred HHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHC---CCCCEEEEEECCCC-----CCCCCCCCC---------HH
Q ss_conf 99998625894599999872699988899999999832---54531667512778-----879886889---------89
Q gi|254781120|r 270 CRHYPGLSNARRITFEYVMLKGINDSPRDALNLIKILK---GIPAKINLIPFNPW-----PGCEYLCSD---------QK 332 (384)
Q Consensus 270 ~~~y~~~~~~rrit~EYvli~gvNDs~e~a~~L~~ll~---~~~~~vNLIp~N~~-----~~~~~~~~~---------~~ 332 (384)
T Consensus 157 l~~A-~~~-g~dvG~EiPaipg~e~~i---~e~~~~~~~~~~~FlNiNELE~sE~N~~~l~~~gy~~~~~~~~av~GS~E 231 (353)
T COG2108 157 LKIA-KKY-GMDVGVEIPAIPGEEEAI---LEFAKALDENGLDFLNINELEFSENNYENLLERGYKISDDGSSAVAGSLE 231 (353)
T ss_pred HHHH-HHH-CCCCEEECCCCCCHHHHH---HHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHCCCEECCCCCCCCCCHHH
T ss_conf 9999-982-855104327886568899---99999987606653421004405211999986676132687554344589
Q ss_pred HHHHHHHHHH-HCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9999999999-879878541587771001120021025655465
Q gi|254781120|r 333 DIVTFSECIK-RSGYSSPIRTPRGLDILAACGQLKSLSKRIPKV 375 (384)
Q Consensus 333 ~i~~F~~~L~-~~Gi~~tiR~srG~DI~aACGQL~~~~~r~~~~ 375 (384)
T Consensus 232 ~~Lk~l~~~~~~~~l~vH~Css~~KDa----vQ~r~Rl~r~Akn 271 (353)
T COG2108 232 AALKVLKWAEENWDLTVHYCSSKFKDA----VQLRNRLKRMAKN 271 (353)
T ss_pred HHHHHHHHHHCCCCCEEEECCHHHHHH----HHHHHHHHHHHHH
T ss_conf 999999987515675489773566689----9998999999860