HHsearch alignment for GI: 254781120 and conserved domain: PRK05927
>PRK05927 hypothetical protein; Provisional.
Probab=94.18 E-value=0.56 Score=28.28 Aligned_cols=195 Identities=17% Similarity=0.175 Sum_probs=105.8
Q ss_pred CHHCCCCCCCCCCHH---HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCC---HHHHHHHH
Q ss_conf 100486132244111---027898999999999999722203444434344454586110144101454---45428999
Q gi|254781120|r 124 CSLTCSFCYTGTQKL---VRNLTAEEILLQVLLARSLLGDFPGCEDIEGMVIPSVGRKISNIVMMGMGE---PLCNFDNV 197 (384)
Q Consensus 124 C~m~C~FCaTg~~G~---~RNLt~~EIv~Qv~~~~~~l~~~~~~~~~~~~~~~~~~~~i~NiVfMGmGE---Pl~N~d~v 197 (384)
T Consensus 55 C~~~C~FCaF~r~~~~~~ay~ls~eei~~~~~e~~~~--------------------G~tEv~i~GG~~P~l~~eyy~~l 114 (350)
T PRK05927 55 CKIDCTFCAFYRKPRSSDAYLLSFDEFRSLMQRYVSS--------------------GVKTVLLQGGVHPQLGIDYLEEL 114 (350)
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--------------------CCCEEEEECCCCCCCCHHHHHHH
T ss_conf 6576934774258999875327999999999999866--------------------98389982688999986999999
Q ss_pred HHHHHCCC-CCCCCCCCCCEEE--EEECCCC--HHHHHHHC----CCCCCEEEEEECCCCHHHHHHCCCCCCCCHHHHHH
Q ss_conf 99960376-8457787753688--8513874--14788601----25651799840455113444123312578999999
Q gi|254781120|r 198 KKSLSIAS-DSMGLSFSKRRIT--LSTSGFV--PNIARVGE----EIGVMLAISLHAVSNDLRNILVPINRKYPLEMLID 268 (384)
Q Consensus 198 ~~ai~~l~-~~~g~~~~~r~IT--vST~Gi~--p~I~~la~----~~~~~LAiSLha~~~~~R~~lmPi~~~~~l~~l~~ 268 (384)
T Consensus 115 ~r~ik~~~P~i~ihafs~~Ei~~~a~~~g~s~~e~L~~Lk~AGL~slPGgGA---EIl~d~VR~~I~p--~K~s~~~Wl~ 189 (350)
T PRK05927 115 VRITVQEFPSLHPHFFSAVEIAHAAQVSGISTEQALQRLWDAGQRTIPGGGA---EILSERVRKIISP--KKMGPDGWIN 189 (350)
T ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCC---CCCCHHHHHHCCC--CCCCHHHHHH
T ss_conf 9999974888665669999999999885999999999999737676899875---0168777751488--8889999999
Q ss_pred HHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCC-------CCCCCCHH--HHHHHHH
Q ss_conf 99999862589459999987269998889999999983254531667512778879-------88688989--9999999
Q gi|254781120|r 269 ACRHYPGLSNARRITFEYVMLKGINDSPRDALNLIKILKGIPAKINLIPFNPWPGC-------EYLCSDQK--DIVTFSE 339 (384)
Q Consensus 269 a~~~y~~~~~~rrit~EYvli~gvNDs~e~a~~L~~ll~~~~~~vNLIp~N~~~~~-------~~~~~~~~--~i~~F~~ 339 (384)
T Consensus 190 i~~~AH~lGi~ttaTmlyGhiEt~e~ri~HL~~lR~lQdeTgGF~~FIpl~F~p~nt~l~~~~~~~~~~~~~Lr~~AvaR 269 (350)
T PRK05927 190 FHKLAHRLGFRSTATMMFGHVENPEDILLHLQTLRDAQDENPGFYSFIPWSYKPGNTALGRRVPQQASPELYYRILALAR 269 (350)
T ss_pred HHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 99999985997520246368799999999999999987650987999946765488746542788998457599999999
Q ss_pred HHHH
Q ss_conf 9998
Q gi|254781120|r 340 CIKR 343 (384)
Q Consensus 340 ~L~~ 343 (384)
T Consensus 270 l~Ld 273 (350)
T PRK05927 270 IFLD 273 (350)
T ss_pred HHCC
T ss_conf 9706