HHsearch alignment for GI: 254781120 and conserved domain: PRK05927

>PRK05927 hypothetical protein; Provisional.
Probab=94.18  E-value=0.56  Score=28.28  Aligned_cols=195  Identities=17%  Similarity=0.175  Sum_probs=105.8

Q ss_pred             CHHCCCCCCCCCCHH---HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCC---HHHHHHHH
Q ss_conf             100486132244111---027898999999999999722203444434344454586110144101454---45428999
Q gi|254781120|r  124 CSLTCSFCYTGTQKL---VRNLTAEEILLQVLLARSLLGDFPGCEDIEGMVIPSVGRKISNIVMMGMGE---PLCNFDNV  197 (384)
Q Consensus       124 C~m~C~FCaTg~~G~---~RNLt~~EIv~Qv~~~~~~l~~~~~~~~~~~~~~~~~~~~i~NiVfMGmGE---Pl~N~d~v  197 (384)
T Consensus        55 C~~~C~FCaF~r~~~~~~ay~ls~eei~~~~~e~~~~--------------------G~tEv~i~GG~~P~l~~eyy~~l  114 (350)
T PRK05927         55 CKIDCTFCAFYRKPRSSDAYLLSFDEFRSLMQRYVSS--------------------GVKTVLLQGGVHPQLGIDYLEEL  114 (350)
T ss_pred             HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--------------------CCCEEEEECCCCCCCCHHHHHHH
T ss_conf             6576934774258999875327999999999999866--------------------98389982688999986999999


Q ss_pred             HHHHHCCC-CCCCCCCCCCEEE--EEECCCC--HHHHHHHC----CCCCCEEEEEECCCCHHHHHHCCCCCCCCHHHHHH
Q ss_conf             99960376-8457787753688--8513874--14788601----25651799840455113444123312578999999
Q gi|254781120|r  198 KKSLSIAS-DSMGLSFSKRRIT--LSTSGFV--PNIARVGE----EIGVMLAISLHAVSNDLRNILVPINRKYPLEMLID  268 (384)
Q Consensus       198 ~~ai~~l~-~~~g~~~~~r~IT--vST~Gi~--p~I~~la~----~~~~~LAiSLha~~~~~R~~lmPi~~~~~l~~l~~  268 (384)
T Consensus       115 ~r~ik~~~P~i~ihafs~~Ei~~~a~~~g~s~~e~L~~Lk~AGL~slPGgGA---EIl~d~VR~~I~p--~K~s~~~Wl~  189 (350)
T PRK05927        115 VRITVQEFPSLHPHFFSAVEIAHAAQVSGISTEQALQRLWDAGQRTIPGGGA---EILSERVRKIISP--KKMGPDGWIN  189 (350)
T ss_pred             HHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCC---CCCCHHHHHHCCC--CCCCHHHHHH
T ss_conf             9999974888665669999999999885999999999999737676899875---0168777751488--8889999999


Q ss_pred             HHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCC-------CCCCCCHH--HHHHHHH
Q ss_conf             99999862589459999987269998889999999983254531667512778879-------88688989--9999999
Q gi|254781120|r  269 ACRHYPGLSNARRITFEYVMLKGINDSPRDALNLIKILKGIPAKINLIPFNPWPGC-------EYLCSDQK--DIVTFSE  339 (384)
Q Consensus       269 a~~~y~~~~~~rrit~EYvli~gvNDs~e~a~~L~~ll~~~~~~vNLIp~N~~~~~-------~~~~~~~~--~i~~F~~  339 (384)
T Consensus       190 i~~~AH~lGi~ttaTmlyGhiEt~e~ri~HL~~lR~lQdeTgGF~~FIpl~F~p~nt~l~~~~~~~~~~~~~Lr~~AvaR  269 (350)
T PRK05927        190 FHKLAHRLGFRSTATMMFGHVENPEDILLHLQTLRDAQDENPGFYSFIPWSYKPGNTALGRRVPQQASPELYYRILALAR  269 (350)
T ss_pred             HHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf             99999985997520246368799999999999999987650987999946765488746542788998457599999999


Q ss_pred             HHHH
Q ss_conf             9998
Q gi|254781120|r  340 CIKR  343 (384)
Q Consensus       340 ~L~~  343 (384)
T Consensus       270 l~Ld  273 (350)
T PRK05927        270 IFLD  273 (350)
T ss_pred             HHCC
T ss_conf             9706