HHsearch alignment for GI: 254781120 and conserved domain: PRK08444

Probab=96.73  E-value=0.0078  Score=42.03  Aligned_cols=169  Identities=15%  Similarity=0.182  Sum_probs=91.3

Q ss_pred             CHHCCCCCCCCCCHH---HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHH---HHHHH
Q ss_conf             100486132244111---027898999999999999722203444434344454586110144101454454---28999
Q gi|254781120|r  124 CSLTCSFCYTGTQKL---VRNLTAEEILLQVLLARSLLGDFPGCEDIEGMVIPSVGRKISNIVMMGMGEPLC---NFDNV  197 (384)
Q Consensus       124 C~m~C~FCaTg~~G~---~RNLt~~EIv~Qv~~~~~~l~~~~~~~~~~~~~~~~~~~~i~NiVfMGmGEPl~---N~d~v  197 (384)
T Consensus        59 C~~~C~FCaF~r~~~~~~aY~ls~eei~~~~~ea~~~--------------------G~tev~i~GG~~P~~~~eyY~~l  118 (353)
T PRK08444         59 CADVCKFCAFSAHRKNPNPYTMSHEEILEIVKESVKR--------------------GIKEVHIVSAHNPNYGYQWYLEI  118 (353)
T ss_pred             CCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHC--------------------CCCEEEEECCCCCCCCHHHHHHH
T ss_conf             5688856756168999987666999999999999975--------------------98789981475989975889999


Q ss_pred             HHHHHCCCCCC--CCCCCCCEEE--EEECCCC--HHHHHHHCCCCCCEEEEEECC-----CCHHHHHHCCCCCCCCHHHH
Q ss_conf             99960376845--7787753688--8513874--147886012565179984045-----51134441233125789999
Q gi|254781120|r  198 KKSLSIASDSM--GLSFSKRRIT--LSTSGFV--PNIARVGEEIGVMLAISLHAV-----SNDLRNILVPINRKYPLEML  266 (384)
Q Consensus       198 ~~ai~~l~~~~--g~~~~~r~IT--vST~Gi~--p~I~~la~~~~~~LAiSLha~-----~~~~R~~lmPi~~~~~l~~l  266 (384)
T Consensus       119 ~r~ik~~~-P~i~i~aft~~EI~~~a~~~~~s~~evL~~Lk~-AGL~---slpGggAEIl~d~VR~~I~p--~K~~~~~W  191 (353)
T PRK08444        119 FKMIKEAY-PNLHVKAMTAAEVDFLSRKFGKSYEEVLEDMLE-YGVD---SMPGGGAEIFDEEVRKKICK--GKVSSERW  191 (353)
T ss_pred             HHHHHHHC-CCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHH-HCCC---CCCCCCCHHCCHHHHHHHCC--CCCCHHHH
T ss_conf             99999858-850477177899999999809999999999998-1987---57898720037778976189--98999999


Q ss_pred             HHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf             99999998625894599999872699988899999999832545316675127
Q gi|254781120|r  267 IDACRHYPGLSNARRITFEYVMLKGINDSPRDALNLIKILKGIPAKINLIPFN  319 (384)
Q Consensus       267 ~~a~~~y~~~~~~rrit~EYvli~gvNDs~e~a~~L~~ll~~~~~~vNLIp~N  319 (384)
T Consensus       192 l~i~~~AH~lGi~ttaTmmyGhvEt~e~rv~HL~~lR~lQd~tgGF~~FIPl~  244 (353)
T PRK08444        192 LEIHKYWHKKGKQSNATMLFGHIENREHRIDHMLRLRDLQDKTGGFNAFIPLV  244 (353)
T ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECC
T ss_conf             99999999829966414677887999999999999998365579835897656