HHsearch alignment for GI: 254781120 and conserved domain: PRK11121
>PRK11121 nrdG anaerobic ribonucleotide reductase-activating protein; Provisional.
Probab=93.70 E-value=0.079 Score=34.61 Aligned_cols=87 Identities=28% Similarity=0.398 Sum_probs=49.7
Q ss_pred CCEEEEEECCCCHHCCCCCCCCCC-HHHC-CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCH
Q ss_conf 733898840651004861322441-1102-78989999999999997222034444343444545861101441014544
Q gi|254781120|r 113 RGTLCVSSQVGCSLTCSFCYTGTQ-KLVR-NLTAEEILLQVLLARSLLGDFPGCEDIEGMVIPSVGRKISNIVMMGMGEP 190 (384)
Q Consensus 113 r~T~CvSSQvGC~m~C~FCaTg~~-G~~R-NLt~~EIv~Qv~~~~~~l~~~~~~~~~~~~~~~~~~~~i~NiVfMGmGEP 190 (384)
T Consensus 18 R~~iw~---qGC~~~C~GC~Np~tw~~~~G~~~~~~~~~~ii~~---l~~~--------------~~~~~GvTisG-GEP 76 (154)
T PRK11121 18 RCTLFV---SGCVHQCPGCYNKSTWRLNSGHPFTKAMEDQIIAD---LNDT--------------RIKRQGLSLSG-GDP 76 (154)
T ss_pred EEEEEE---CCCCCCCCCCCCHHHCCCCCCEECHHHHHHHHHHH---HHHC--------------CCCCCCEEEEC-CCC
T ss_conf 999995---68877797999977858758977619999999998---7642--------------35547538868-882
Q ss_pred H--HHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 5--4289999996037684577877536888513874
Q gi|254781120|r 191 L--CNFDNVKKSLSIASDSMGLSFSKRRITLSTSGFV 225 (384)
Q Consensus 191 l--~N~d~v~~ai~~l~~~~g~~~~~r~ITvST~Gi~ 225 (384)
T Consensus 77 ~~q~~~~~l~~l~~~~k~~~-~~~---~I~~yT-Gyt 108 (154)
T PRK11121 77 LHPQNVPAILKLVKRVKAEC-PGK---DIWLWT-GYK 108 (154)
T ss_pred CCCCCHHHHHHHHHHHHHHC-CCC---CEEEEE-CCC
T ss_conf 65147999999999999758-998---499981-863