HHsearch alignment for GI: 254781120 and conserved domain: TIGR03365
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=97.84 E-value=0.00085 Score=49.16 Aligned_cols=162 Identities=19% Similarity=0.257 Sum_probs=87.9
Q ss_pred EEEEECCCCCCCEEEEEECCCCHHCCCCCCCCCC------HHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 5443023467733898840651004861322441------1102789899999999999972220344443434445458
Q gi|254781120|r 103 IETVYIPEKSRGTLCVSSQVGCSLTCSFCYTGTQ------KLVRNLTAEEILLQVLLARSLLGDFPGCEDIEGMVIPSVG 176 (384)
Q Consensus 103 IEsVlip~~~r~T~CvSSQvGC~m~C~FCaTg~~------G~~RNLt~~EIv~Qv~~~~~~l~~~~~~~~~~~~~~~~~~ 176 (384)
T Consensus 22 ~p~vFvR~-----------~GCnl~C~~CDT~y~~~~~~~~~~~~~~~~~i~~~~~~~~~-------------------- 70 (238)
T TIGR03365 22 QKTMFVRT-----------GGCDYRCSWCDSLFTWDGSAKDTWRPMTAEEVWQELKALGG-------------------- 70 (238)
T ss_pred CEEEEEEE-----------CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC--------------------
T ss_conf 31899940-----------89898676589887617878877563789999999998348--------------------
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCEEEEEECCCCHHHHHHCC
Q ss_conf 61101441014544542899999960376845778775368885138741478860125651799840455113444123
Q gi|254781120|r 177 RKISNIVMMGMGEPLCNFDNVKKSLSIASDSMGLSFSKRRITLSTSGFVPNIARVGEEIGVMLAISLHAVSNDLRNILVP 256 (384)
Q Consensus 177 ~~i~NiVfMGmGEPl~N~d~v~~ai~~l~~~~g~~~~~r~ITvST~Gi~p~I~~la~~~~~~LAiSLha~~~~~R~~lmP 256 (384)
T Consensus 71 ~~~~~V~iTG-GEPllq-~~~~~L~~~l~~-~g~-----~v~iETnGt~~-~~~~~~~--d~~~~d~K~psSg-----~~ 134 (238)
T TIGR03365 71 GTPLHVSLSG-GNPALQ-KPLGELIDLGKA-KGY-----RFALETQGSVW-QDWFRDL--DDLTLSPKPPSSG-----ME 134 (238)
T ss_pred CCCCEEEECC-CCHHHH-CCHHHHHHHHHH-CCC-----EEEEECCCCCC-CCCCCCC--CEEEEEEECCCCC-----CC
T ss_conf 9861899459-983444-189999999985-798-----49997899876-0004557--8899964779998-----96
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 312578999999999998625894599999872699988899999999832545316675127788
Q gi|254781120|r 257 INRKYPLEMLIDACRHYPGLSNARRITFEYVMLKGINDSPRDALNLIKILKGIPAKINLIPFNPWP 322 (384)
Q Consensus 257 i~~~~~l~~l~~a~~~y~~~~~~rrit~EYvli~gvNDs~e~a~~L~~ll~~~~~~vNLIp~N~~~ 322 (384)
T Consensus 135 ~~--~--~~~~~~l~~-~~-~-~~~~~~KFVI~-~~~-D~~~a~ei~~~~~~--~pv~l~p~~~~~ 189 (238)
T TIGR03365 135 TD--W--QALDDCIER-LD-D-GPQTSLKVVVF-DDA-DYAYAKEVHARYPD--LPFYLQPGNHTP 189 (238)
T ss_pred CC--H--HHHHHHHHH-HC-C-CCCCEEEEEEC-CHH-HHHHHHHHHHHCCC--CCEEECCCCCCC
T ss_conf 34--6--789999998-44-4-89706999976-789-99999999997479--978965688856